BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013402
(443 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255537765|ref|XP_002509949.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223549848|gb|EEF51336.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 446
Score = 730 bits (1885), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/436 (83%), Positives = 394/436 (90%), Gaps = 2/436 (0%)
Query: 8 LSILLSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQH 67
SIL+ Y V TCSGIVPMRYRNDKISI DFGGVGDGKT+NTKAFR AIYRIQH
Sbjct: 13 FSILMIYSTV--AHGVETCSGIVPMRYRNDKISIADFGGVGDGKTVNTKAFRAAIYRIQH 70
Query: 68 LRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRE 127
L+R GGTLLY+PPGV+LTGSFNLTSHMTLYLA+GAVIKATQDTWNWPLIAPLPSYGRGRE
Sbjct: 71 LKRRGGTLLYIPPGVFLTGSFNLTSHMTLYLARGAVIKATQDTWNWPLIAPLPSYGRGRE 130
Query: 128 RPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSII 187
R GGRYMSFIHGDGL DVVITGENGTIDGQG IWWNMWRQRTL FTRPNL+EF+NSR II
Sbjct: 131 RLGGRYMSFIHGDGLHDVVITGENGTIDGQGDIWWNMWRQRTLQFTRPNLVEFLNSRGII 190
Query: 188 ISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGD 247
ISNVIFQNSPFWNIHPVYCSNVVIR+VTILAP DSPNTDGIDPDSSSNVCIEDSYISTGD
Sbjct: 191 ISNVIFQNSPFWNIHPVYCSNVVIRFVTILAPHDSPNTDGIDPDSSSNVCIEDSYISTGD 250
Query: 248 DLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNV 307
DLVAVKSGWDEYGIAYG PSS ITIRR+TGSSPF+GIAVGSETSGGVE+VLAE+INLY++
Sbjct: 251 DLVAVKSGWDEYGIAYGRPSSHITIRRITGSSPFAGIAVGSETSGGVEHVLAENINLYDM 310
Query: 308 GVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITI 367
GVG+HVKTNIGRGGFIRNIT SDVYM+NARKGIKIAGDVGDHPDD +NPNALPVV GI
Sbjct: 311 GVGLHVKTNIGRGGFIRNITFSDVYMKNARKGIKIAGDVGDHPDDNYNPNALPVVKGIIF 370
Query: 368 KDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPC 427
+ VWG V Q G IQGLK+SPFTGICLSNINL GV GP S P KCSDVSG+A +V P+PC
Sbjct: 371 RGVWGENVLQPGAIQGLKSSPFTGICLSNINLHGVPGPRSTPWKCSDVSGAALEVSPFPC 430
Query: 428 SELSSSQQTGACSNHF 443
SEL+++ QTG+CS+H
Sbjct: 431 SELATTHQTGSCSDHI 446
>gi|356567484|ref|XP_003551949.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 442
Score = 724 bits (1870), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/422 (82%), Positives = 383/422 (90%), Gaps = 1/422 (0%)
Query: 19 SLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYV 78
++ S TCS IVP+RYR+D+ISITDFGGVGDG+TLNTKAFR A+YRIQHLRR GGT+LYV
Sbjct: 21 AIYSAATCSNIVPLRYRSDRISITDFGGVGDGRTLNTKAFRAAVYRIQHLRRRGGTVLYV 80
Query: 79 PPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIH 138
PPGVYLT SFNLTSHMTLYLA GAVIKATQ+ NWPLI PLPSYGRGRE PGGRYMSFIH
Sbjct: 81 PPGVYLTESFNLTSHMTLYLAAGAVIKATQELGNWPLIVPLPSYGRGRELPGGRYMSFIH 140
Query: 139 GDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPF 198
GDGL DVVITGENGTIDGQG +WWNMWRQRTL FTRPNL+EF+NS+ IIISNVIF+NSPF
Sbjct: 141 GDGLSDVVITGENGTIDGQGDVWWNMWRQRTLQFTRPNLVEFVNSQDIIISNVIFKNSPF 200
Query: 199 WNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDE 258
WNIHPVYCSNVV+RYVTILAP DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDE
Sbjct: 201 WNIHPVYCSNVVVRYVTILAPRDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDE 260
Query: 259 YGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIG 318
YGIAYG PS GITIRRVTGSSPF+GIA+GSETSGGVENVLAEHINL+N+GVGIH+KTN G
Sbjct: 261 YGIAYGRPSYGITIRRVTGSSPFAGIAIGSETSGGVENVLAEHINLFNMGVGIHIKTNSG 320
Query: 319 RGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQS 378
RGG I+NITV+ VY+ENAR+GIKIAGDVG HPD+KFNPNALPVV GITIK+VWG KV Q+
Sbjct: 321 RGGLIKNITVAHVYVENARQGIKIAGDVGGHPDEKFNPNALPVVKGITIKNVWGVKVNQA 380
Query: 379 GLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGA 438
GLI GL+NSPFT +CLS+IN G+ GP SP KCSDV G A+QV PWPCS+L SSQ+ G+
Sbjct: 381 GLIHGLRNSPFTDVCLSDINFHGMEGPRSPSWKCSDVFGFAHQVSPWPCSQL-SSQEPGS 439
Query: 439 CS 440
C+
Sbjct: 440 CA 441
>gi|297742322|emb|CBI34471.3| unnamed protein product [Vitis vinifera]
Length = 447
Score = 724 bits (1869), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/445 (79%), Positives = 387/445 (86%), Gaps = 4/445 (0%)
Query: 1 MFRFLVTLSILLS----YFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTK 56
M RF+V + + + + LA VTCSGIVPMR+RND ISI DFGGVGDGKTLNTK
Sbjct: 1 MCRFVVWIFLCFAATALFLTRLVLAGDVTCSGIVPMRHRNDVISIKDFGGVGDGKTLNTK 60
Query: 57 AFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLI 116
AFR AIYRI+HLRR GGTLLY+PPGVYLT SFNLTSHMTLYL+K AVI+ATQDT +WPLI
Sbjct: 61 AFRAAIYRIEHLRRRGGTLLYIPPGVYLTESFNLTSHMTLYLSKDAVIRATQDTGSWPLI 120
Query: 117 APLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPN 176
APLPSYGRGRE PGGRYMSFIH DG+ DV+ITGENGTIDGQG +WWNMWRQRTL FTRPN
Sbjct: 121 APLPSYGRGRELPGGRYMSFIHADGVHDVIITGENGTIDGQGEVWWNMWRQRTLQFTRPN 180
Query: 177 LIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNV 236
LIE +NSR+IIISNVIF++SPFWNIHPVYC NVV+++VTILAP DSPNTDGIDPDSSSNV
Sbjct: 181 LIELINSRNIIISNVIFRDSPFWNIHPVYCRNVVVQFVTILAPHDSPNTDGIDPDSSSNV 240
Query: 237 CIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVEN 296
CIEDSYISTGDDLVAVKSGWDEYGIAYG PSSGITIRR+TGSSPF+GIAVGSETSGGV+N
Sbjct: 241 CIEDSYISTGDDLVAVKSGWDEYGIAYGRPSSGITIRRITGSSPFAGIAVGSETSGGVQN 300
Query: 297 VLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNP 356
V AEHINLYN+GVGIH+KTNIGRGG IRNITVS+VYME AR GIKIAGDVGDHPDD FNP
Sbjct: 301 VFAEHINLYNMGVGIHLKTNIGRGGVIRNITVSNVYMEKARTGIKIAGDVGDHPDDNFNP 360
Query: 357 NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVS 416
NALPVV G+ I+DVWG V Q G I GLKNSPFTGICLS INL G P + P KCSDVS
Sbjct: 361 NALPVVKGVVIRDVWGLDVLQPGSIIGLKNSPFTGICLSKINLHGKIKPGTAPWKCSDVS 420
Query: 417 GSAYQVKPWPCSELSSSQQTGACSN 441
G+A V PWPCSEL+S QTG+CS+
Sbjct: 421 GAAVGVSPWPCSELTSPGQTGSCSS 445
>gi|356524183|ref|XP_003530711.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 474
Score = 724 bits (1868), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/422 (81%), Positives = 383/422 (90%), Gaps = 1/422 (0%)
Query: 19 SLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYV 78
++ S TCS IV +RYR+D+IS+TDFGGVGDG+TLNTKAFR A+YRIQHLRR GGT+LYV
Sbjct: 53 AIYSTTTCSNIVSLRYRSDRISVTDFGGVGDGRTLNTKAFRAAVYRIQHLRRRGGTVLYV 112
Query: 79 PPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIH 138
PPGVYLT SFNLTSHMTLYLA GAVIKATQ+ NWPLIAPLPSYGRGRE PGGRYMSFIH
Sbjct: 113 PPGVYLTESFNLTSHMTLYLAAGAVIKATQELGNWPLIAPLPSYGRGRELPGGRYMSFIH 172
Query: 139 GDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPF 198
GDGL DVVITGENGTIDGQG +WWNMWRQRTL FTRPNL+EF+NS+ IIISNVIF+NSPF
Sbjct: 173 GDGLSDVVITGENGTIDGQGDVWWNMWRQRTLQFTRPNLVEFVNSQDIIISNVIFKNSPF 232
Query: 199 WNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDE 258
WNIHPVYCSNVV+RYVTILAP DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDE
Sbjct: 233 WNIHPVYCSNVVVRYVTILAPRDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDE 292
Query: 259 YGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIG 318
YGIAYG PS GITIRR+TGSSPF+GIA+GSETSGGVENVLAEHINL+N+GVGIH+KTN G
Sbjct: 293 YGIAYGRPSYGITIRRLTGSSPFAGIAIGSETSGGVENVLAEHINLFNMGVGIHIKTNSG 352
Query: 319 RGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQS 378
RGG I+NITV+ VY+ENAR+GIKIAGDVG HPD+KFNPNALPVV GITIK+VWG +V Q+
Sbjct: 353 RGGLIKNITVAHVYVENARQGIKIAGDVGGHPDEKFNPNALPVVKGITIKNVWGVRVNQA 412
Query: 379 GLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGA 438
GLI GL+NSPFT +CLSNIN G+ GP SP KCSDV G A+QV PWPCS+L SSQ+ G+
Sbjct: 413 GLIHGLRNSPFTDVCLSNINFHGMRGPRSPSWKCSDVFGFAHQVSPWPCSQL-SSQEPGS 471
Query: 439 CS 440
C+
Sbjct: 472 CA 473
>gi|224075086|ref|XP_002304552.1| predicted protein [Populus trichocarpa]
gi|222841984|gb|EEE79531.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 720 bits (1858), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/412 (87%), Positives = 380/412 (92%)
Query: 32 MRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLT 91
MR RNDKISI DFGGVGDGKTLNTKAFREA+YRIQHLRR GGTLLY+PPGVYLT SFNLT
Sbjct: 1 MRLRNDKISIADFGGVGDGKTLNTKAFREAVYRIQHLRRRGGTLLYIPPGVYLTESFNLT 60
Query: 92 SHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGEN 151
SHMTLYLA+GAVIKATQDT NWPLIAPLPSYGRGRER GGRYMSFIHGDGLQDV+ITGEN
Sbjct: 61 SHMTLYLARGAVIKATQDTGNWPLIAPLPSYGRGRERLGGRYMSFIHGDGLQDVIITGEN 120
Query: 152 GTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVI 211
GTIDGQG +WWNMWRQRTL FTRPNL+EF+NSR IIISNVIF+NSPFWNIHPVY NVVI
Sbjct: 121 GTIDGQGDVWWNMWRQRTLLFTRPNLVEFVNSRGIIISNVIFRNSPFWNIHPVYSRNVVI 180
Query: 212 RYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGIT 271
RYVTILAP DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYG PSS IT
Sbjct: 181 RYVTILAPLDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSSDIT 240
Query: 272 IRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDV 331
IRR+TGSSPFSGIAVGSETSGGV+NVL E++NLYN+GVGIH+KTNIGRGGFI+NITV+DV
Sbjct: 241 IRRITGSSPFSGIAVGSETSGGVKNVLVENVNLYNMGVGIHIKTNIGRGGFIKNITVTDV 300
Query: 332 YMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTG 391
YMEN RKGIKIAGDVGDHPDD FNPNALPVV GIT+K +WG KVQQ G IQGLKNSPFTG
Sbjct: 301 YMENVRKGIKIAGDVGDHPDDSFNPNALPVVYGITLKSIWGEKVQQPGSIQGLKNSPFTG 360
Query: 392 ICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSNHF 443
ICLSNINL GV GP S P KCSDVSGSA V PWPCSEL+S QTG+CS+HF
Sbjct: 361 ICLSNINLHGVPGPRSSPWKCSDVSGSALLVSPWPCSELTSPHQTGSCSDHF 412
>gi|356554060|ref|XP_003545367.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 446
Score = 702 bits (1813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/446 (78%), Positives = 392/446 (87%), Gaps = 5/446 (1%)
Query: 1 MFRFLVTLSILLSYFNCFSLA----SVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTK 56
M TL++L+ + C+ L +CS IV + +R D ISIT+FGGVGDG+TLNTK
Sbjct: 1 MLLGFSTLALLVCFSCCWLLVLGEGETASCSNIVALGHRTDNISITEFGGVGDGRTLNTK 60
Query: 57 AFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLI 116
AFREAIYR+QHL R GGTLLYVPPGVYLT FNLTSHMTLYLA GAVI ATQD+ NWPLI
Sbjct: 61 AFREAIYRVQHLPREGGTLLYVPPGVYLTEPFNLTSHMTLYLAAGAVIMATQDSLNWPLI 120
Query: 117 APLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPN 176
APLPSYGRGRERPGGRYMSFIHGDG+QDVVITGENGTIDGQG WWN WRQ TL FTRPN
Sbjct: 121 APLPSYGRGRERPGGRYMSFIHGDGVQDVVITGENGTIDGQGDAWWNKWRQGTLQFTRPN 180
Query: 177 LIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNV 236
L+EF+NSR IIISNVIF+NSPFWNIHPVYCSNVV+RYVTILAP DSPNTDGIDPDSSSNV
Sbjct: 181 LVEFVNSRDIIISNVIFKNSPFWNIHPVYCSNVVVRYVTILAPRDSPNTDGIDPDSSSNV 240
Query: 237 CIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVEN 296
CIEDSYISTGDDLVAVKSGWDEYGIAYG PSS ITIRR+TGSSPF+GIA+GSETSGGVEN
Sbjct: 241 CIEDSYISTGDDLVAVKSGWDEYGIAYGRPSSDITIRRITGSSPFAGIAIGSETSGGVEN 300
Query: 297 VLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNP 356
VLAEHINLYN+G+GIH+KTN GRGGFI+NIT+S VYME ARKGI+I+GDVGDHPDDKF+
Sbjct: 301 VLAEHINLYNMGIGIHIKTNTGRGGFIKNITMSHVYMEEARKGIRISGDVGDHPDDKFDA 360
Query: 357 NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVS 416
NALP+V G+TIK+VWG KV Q+GLIQGL+NSPFT ICL +INL GV GP +PP KCSDVS
Sbjct: 361 NALPLVKGVTIKNVWGMKVLQAGLIQGLRNSPFTDICLYDINLHGVTGPRTPPWKCSDVS 420
Query: 417 GSAYQVKPWPCSELSSSQQTGACSNH 442
G A+QV PWPCSELSS+QQ G+C+N+
Sbjct: 421 GFAHQVSPWPCSELSSNQQ-GSCANY 445
>gi|15236625|ref|NP_194113.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|4454051|emb|CAA23048.1| putative polygalacturonase [Arabidopsis thaliana]
gi|7269231|emb|CAB81300.1| putative polygalacturonase [Arabidopsis thaliana]
gi|17065242|gb|AAL32775.1| putative polygalacturonase [Arabidopsis thaliana]
gi|22136230|gb|AAM91193.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332659410|gb|AEE84810.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 444
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/442 (74%), Positives = 380/442 (85%), Gaps = 7/442 (1%)
Query: 8 LSILLSYFNCFSLASV------VTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREA 61
LS+ + F+C ++S TCSGIVP+RYR DKISITDFGGVGDG+T+NTKAFR A
Sbjct: 4 LSVSIFLFSCLFVSSSSLGDSEATCSGIVPLRYRYDKISITDFGGVGDGRTVNTKAFRAA 63
Query: 62 IYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPS 121
IYRIQHL+R GGTLLY+PPGVYLT SFNLTSHMTLYLAKGAVI+A QDTWNWPLI PLPS
Sbjct: 64 IYRIQHLKRRGGTLLYIPPGVYLTESFNLTSHMTLYLAKGAVIRAVQDTWNWPLIDPLPS 123
Query: 122 YGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFM 181
YGRGRE PGGRYMSFIHGDGL+DVVITG+NGTIDGQG +WWNMWR RTL +TRPNLIEF
Sbjct: 124 YGRGRELPGGRYMSFIHGDGLRDVVITGQNGTIDGQGEVWWNMWRSRTLKYTRPNLIEFK 183
Query: 182 NSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDS 241
+S+ IIISNVIFQNSPFWNIHPVYCSNVVI +VTILAP DSPNTDGIDPDSS NVCIEDS
Sbjct: 184 DSKEIIISNVIFQNSPFWNIHPVYCSNVVIHHVTILAPQDSPNTDGIDPDSSYNVCIEDS 243
Query: 242 YISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEH 301
YISTGDDLVA+KSGWD+YGIAYG PSS ITIRR+TGSSPF+GIA+GSETSGG++N++AEH
Sbjct: 244 YISTGDDLVAIKSGWDQYGIAYGRPSSNITIRRITGSSPFAGIAIGSETSGGIKNIIAEH 303
Query: 302 INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPV 361
I L N+GVG+++KTNIGRGG+I+NI +SDVY++ A+ GIKIAGD GDHPD+ +NPNALPV
Sbjct: 304 ITLSNMGVGVNIKTNIGRGGYIKNIKISDVYVDTAKYGIKIAGDTGDHPDENYNPNALPV 363
Query: 362 VNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQ 421
V GI IK+VWG V+ +G IQGLK SPFTGICLS INL G + KCSDVSG++ +
Sbjct: 364 VKGIHIKNVWGVNVRNAGSIQGLKGSPFTGICLSEINLHGSLN-SYKTWKCSDVSGTSLK 422
Query: 422 VKPWPCSELSSSQQTGACSNHF 443
V PWPCSEL ++ + CS+ F
Sbjct: 423 VSPWPCSELRTTGGSNLCSSTF 444
>gi|297799608|ref|XP_002867688.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313524|gb|EFH43947.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 444
Score = 687 bits (1774), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/442 (73%), Positives = 380/442 (85%), Gaps = 7/442 (1%)
Query: 8 LSILLSYFNCFSLASV------VTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREA 61
LS+ + F+C +++S TCSGIVP+RYR DKISITD+GGVGDG+T+NTKAFR A
Sbjct: 4 LSVSIFLFSCLAVSSSSYGDSEATCSGIVPLRYRYDKISITDYGGVGDGRTVNTKAFRAA 63
Query: 62 IYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPS 121
IYRIQHL+R GGTLLY+PPGVYLT SFNLTSHMT YLAKGAVI+A QDTWNWPLI PLPS
Sbjct: 64 IYRIQHLKRRGGTLLYIPPGVYLTESFNLTSHMTFYLAKGAVIRAVQDTWNWPLIDPLPS 123
Query: 122 YGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFM 181
YGRGRE PGGRYMSFIHGDGL+DVVITG+NGTIDGQG +WWNMWR RTL +TRPNLIEF
Sbjct: 124 YGRGRELPGGRYMSFIHGDGLRDVVITGQNGTIDGQGEVWWNMWRSRTLKYTRPNLIEFK 183
Query: 182 NSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDS 241
+S+ IIISNVIFQNSPFWNIHPVYCSNVVI +VTILAP DSPNTDGIDPDSS NVCIEDS
Sbjct: 184 DSKEIIISNVIFQNSPFWNIHPVYCSNVVIHHVTILAPQDSPNTDGIDPDSSYNVCIEDS 243
Query: 242 YISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEH 301
YISTGDDLVA+KSGWDEYGIAYG PSS ITIRR+TGSSPF+GIA+GSETSGG++N++AEH
Sbjct: 244 YISTGDDLVAIKSGWDEYGIAYGRPSSNITIRRITGSSPFAGIAIGSETSGGIKNIVAEH 303
Query: 302 INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPV 361
I L N+GVG+++KTNIGRGG+I+NI +SDVY++ A+ GIKIAGD GDHPD+ +NPNALP+
Sbjct: 304 ITLSNMGVGVNIKTNIGRGGYIKNIKISDVYIDTAKYGIKIAGDTGDHPDENYNPNALPI 363
Query: 362 VNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQ 421
V GI IK+VWG V+ +G IQGLK SPFTGICLS INL G + KCSDV G++ +
Sbjct: 364 VKGIHIKNVWGVNVRNAGSIQGLKGSPFTGICLSEINLHGSLN-SYKTWKCSDVIGTSLK 422
Query: 422 VKPWPCSELSSSQQTGACSNHF 443
V PWPCSEL ++ + +CS+ F
Sbjct: 423 VSPWPCSELRTTGGSYSCSSTF 444
>gi|357494037|ref|XP_003617307.1| Glycoside hydrolase family 28 protein [Medicago truncatula]
gi|355518642|gb|AET00266.1| Glycoside hydrolase family 28 protein [Medicago truncatula]
Length = 450
Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/451 (76%), Positives = 390/451 (86%), Gaps = 9/451 (1%)
Query: 1 MFRFLVTLSILLSYFNCFSLA-----SVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNT 55
MF L++L Y C+ V+TCS IVP++YR D IS+TDFGGVGDG TLNT
Sbjct: 1 MFLGFTKLTLLFLYTCCWVCVLSENNEVITCSNIVPLKYRTDNISLTDFGGVGDGHTLNT 60
Query: 56 KAFREAIYRIQHL-RRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWP 114
KAFREAIYRI HL +R GGT LYVPPGVYLT FNLTSHMTL+LA GAVIKATQD+ NWP
Sbjct: 61 KAFREAIYRINHLSQREGGTTLYVPPGVYLTEPFNLTSHMTLHLAAGAVIKATQDSSNWP 120
Query: 115 LIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTR 174
LIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG +WWNMWR+RTL FTR
Sbjct: 121 LIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGDVWWNMWRKRTLQFTR 180
Query: 175 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 234
PNL+EF+NS+ IIISNVIF++SPFWNIHPVYCSNVVIR+ TILAP DSPNTDGIDPDSSS
Sbjct: 181 PNLVEFVNSKDIIISNVIFKDSPFWNIHPVYCSNVVIRFATILAPRDSPNTDGIDPDSSS 240
Query: 235 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 294
NVCIEDSYISTGDDLVAVKSGWDEYGIAYG SS ITIRRV+GSSPF+GIAVGSETSGGV
Sbjct: 241 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGRSSSNITIRRVSGSSPFAGIAVGSETSGGV 300
Query: 295 ENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKF 354
EN+LAEHINLYN+G+GIH+KTNIGRGG+I+NI VS+VY+ENARKGIKI+GDVGDH DDK+
Sbjct: 301 ENILAEHINLYNMGIGIHIKTNIGRGGYIKNINVSNVYIENARKGIKISGDVGDHADDKY 360
Query: 355 NPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTS--PPLKC 412
+ NALP+V GIT+ +VWG KV Q+GLI+G+K+SPFT ICLS+INL GV G S P +C
Sbjct: 361 DSNALPIVKGITMANVWGVKVLQAGLIKGMKHSPFTDICLSDINLHGVNGTRSRTPSWQC 420
Query: 413 SDVSGSAYQVKPWPCSELSSSQQTGACSNHF 443
SDVSG A QV PWPCSEL S Q G+C+N++
Sbjct: 421 SDVSGVALQVSPWPCSEL-ISHQLGSCANYY 450
>gi|186701223|gb|ACC91250.1| glycoside hydrolase family 28 protein [Arabidopsis halleri]
Length = 444
Score = 682 bits (1760), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/442 (73%), Positives = 377/442 (85%), Gaps = 7/442 (1%)
Query: 8 LSILLSYFNCFSLASV------VTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREA 61
LS+ + F+C +++S TCSGIVP+RYR DKISIT++GGVGDG+T+NTKAFR A
Sbjct: 4 LSVSIFLFSCLAVSSSSFGDSEATCSGIVPLRYRYDKISITEYGGVGDGRTVNTKAFRAA 63
Query: 62 IYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPS 121
IYRIQHL+R GGTLLY+PPGVYLT SFNLTSHMTLYLAKGAVI+A QDTWNWPLI PLPS
Sbjct: 64 IYRIQHLKRRGGTLLYIPPGVYLTESFNLTSHMTLYLAKGAVIRAVQDTWNWPLIDPLPS 123
Query: 122 YGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFM 181
YGRGRE PGGRYMSFIHGDGL+DVVITG+NGTIDGQG +WWNMW RTL +TRPNLIEF
Sbjct: 124 YGRGRELPGGRYMSFIHGDGLRDVVITGQNGTIDGQGEVWWNMWHSRTLKYTRPNLIEFK 183
Query: 182 NSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDS 241
+S+ IIISNVIFQNSPFWNIHPVYCSNVVI +VTILAP DSPNTDGIDPDSS NVCIEDS
Sbjct: 184 DSKEIIISNVIFQNSPFWNIHPVYCSNVVIHHVTILAPQDSPNTDGIDPDSSYNVCIEDS 243
Query: 242 YISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEH 301
YISTGDDLVA+KSGWDEYGIAYG PSS ITIRR+TGSSPF+GIA+GSETSGG++N++AEH
Sbjct: 244 YISTGDDLVAIKSGWDEYGIAYGRPSSNITIRRITGSSPFAGIAIGSETSGGIKNIVAEH 303
Query: 302 INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPV 361
I L N+GVG+++KTNIGRGG+I+NI +SDVY++ A+ GIKI GD GDHPD+ +NPNALP+
Sbjct: 304 ITLSNMGVGVNIKTNIGRGGYIKNIKISDVYIDTAKYGIKITGDTGDHPDENYNPNALPI 363
Query: 362 VNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQ 421
V GI IK+VWG V+ +G IQGLK SPFTGICLS INL G + KCSDV G++ +
Sbjct: 364 VKGIHIKNVWGVNVRNAGSIQGLKGSPFTGICLSEINLHGSLN-SYKTWKCSDVIGTSLK 422
Query: 422 VKPWPCSELSSSQQTGACSNHF 443
V PWPCSEL ++ CS+ F
Sbjct: 423 VSPWPCSELRTTGGYNLCSSTF 444
>gi|449452247|ref|XP_004143871.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
gi|449501789|ref|XP_004161459.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 445
Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/426 (77%), Positives = 378/426 (88%)
Query: 18 FSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLY 77
++A + TCSGIVPM+YRNDKISI DFGG+GDG+TLNT+AFR AIYRIQHLRR GGTLLY
Sbjct: 20 LAVADLTTCSGIVPMKYRNDKISIADFGGIGDGRTLNTRAFRAAIYRIQHLRRRGGTLLY 79
Query: 78 VPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFI 137
+PPGVYLT +FNLTSHMTLYLAKGAVIKA QD+ NWP+IAPLPSYGRGRERPGGRY+S I
Sbjct: 80 IPPGVYLTETFNLTSHMTLYLAKGAVIKAVQDSSNWPVIAPLPSYGRGRERPGGRYISLI 139
Query: 138 HGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSP 197
HGDG+ DVVITGENGTIDGQG WWNMWR TL +TRP+L+EF+NS +IIISNV+F NSP
Sbjct: 140 HGDGVHDVVITGENGTIDGQGDAWWNMWRTGTLKYTRPSLVEFVNSYNIIISNVMFLNSP 199
Query: 198 FWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWD 257
FWNIHPVYC NVV+RYVTILAP DSPNTDG+DPDSS+NVCIEDSYISTGDDLVAVKSGWD
Sbjct: 200 FWNIHPVYCRNVVVRYVTILAPRDSPNTDGVDPDSSNNVCIEDSYISTGDDLVAVKSGWD 259
Query: 258 EYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNI 317
EYGIAYG S ITIRR++GSSPF+G+AVGSE SGGV NVLAEH+N Y++GVGI++KTNI
Sbjct: 260 EYGIAYGRCSYDITIRRISGSSPFAGVAVGSEASGGVANVLAEHLNFYDMGVGINIKTNI 319
Query: 318 GRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQ 377
GRGGFI+NITVS+VYMEN+RKG+KIAGD GDHPDDKF+PNALP+V ITIK++WG VQQ
Sbjct: 320 GRGGFIKNITVSNVYMENSRKGLKIAGDAGDHPDDKFDPNALPIVKDITIKNIWGVNVQQ 379
Query: 378 SGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTG 437
+G I GL++SPFTGICLSNINL+G P S P CS VSG+A V PWPCSEL+S+ Q G
Sbjct: 380 AGSIYGLRDSPFTGICLSNINLRGATRPRSVPWTCSYVSGAASLVSPWPCSELTSTDQDG 439
Query: 438 ACSNHF 443
CS++F
Sbjct: 440 LCSDNF 445
>gi|356499323|ref|XP_003518491.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like
[Glycine max]
Length = 445
Score = 629 bits (1622), Expect = e-178, Method: Compositional matrix adjust.
Identities = 306/411 (74%), Positives = 346/411 (84%), Gaps = 4/411 (0%)
Query: 11 LLSYFNCFS-LASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLR 69
LL F+C S V+CS IV + +R D ISIT+F GVG+ +TLNTK FREA
Sbjct: 38 LLVCFSCVSGEGETVSCSNIVALGHRADNISITEFVGVGNERTLNTKTFREAF---STCH 94
Query: 70 RSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERP 129
GGTLLYVPPGVYLT +F+LTSH TLYLA G +I ATQD+ NWPLIAPLPSYGRGRERP
Sbjct: 95 XDGGTLLYVPPGVYLTETFHLTSHRTLYLATGTIIMATQDSSNWPLIAPLPSYGRGRERP 154
Query: 130 GGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIIS 189
GRYMSFIHGDG+ DVVITGENGTIDGQG WWN W+QRTL FTRPNL+EF+NSR IIIS
Sbjct: 155 AGRYMSFIHGDGVXDVVITGENGTIDGQGDEWWNKWKQRTLQFTRPNLVEFVNSRDIIIS 214
Query: 190 NVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDL 249
NVIF++SPFWNIHP CSNVV+RYVTILAP DSPNTDGIDP SSSNVCIEDSYISTGDDL
Sbjct: 215 NVIFKSSPFWNIHPFLCSNVVVRYVTILAPRDSPNTDGIDPHSSSNVCIEDSYISTGDDL 274
Query: 250 VAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGV 309
VA KSGWDEYGI YG PSS ITIRRVTGSSPF+GIA+GSETSGGVENVL+EHINLYN+G+
Sbjct: 275 VAEKSGWDEYGIVYGRPSSDITIRRVTGSSPFAGIAIGSETSGGVENVLSEHINLYNMGI 334
Query: 310 GIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKD 369
GIH+KTN GR G+I+NIT+S VYME ARKGI+I+GDVGDHPDDK++PNALP+V G+TIK+
Sbjct: 335 GIHIKTNTGRAGYIKNITMSHVYMEEARKGIRISGDVGDHPDDKYDPNALPLVKGVTIKN 394
Query: 370 VWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY 420
VWG KV Q+GLIQGL + PF IC +INL GV GP +PP KC+DVSG A+
Sbjct: 395 VWGVKVLQAGLIQGLSSXPFRDICQYDINLHGVTGPRTPPWKCTDVSGFAH 445
>gi|15238207|ref|NP_199002.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|10177371|dbj|BAB10662.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|50897172|gb|AAT85725.1| At5g41870 [Arabidopsis thaliana]
gi|332007355|gb|AED94738.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 449
Score = 625 bits (1612), Expect = e-176, Method: Compositional matrix adjust.
Identities = 309/440 (70%), Positives = 357/440 (81%), Gaps = 6/440 (1%)
Query: 5 LVTLSILLSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYR 64
L LS +L + SL + +TCSGIVPM++RN+ +SI+DFG VGDGKTLNTKAF AI R
Sbjct: 13 LFLLSTVLPHH--LSLGAPITCSGIVPMKHRNEMLSISDFGAVGDGKTLNTKAFNSAIDR 70
Query: 65 IQHLRRSG-GTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYG 123
I++ S GTLLYVP GVYLT SFNLTSHMTLYLA GAVIKA QDT WPL PLPSYG
Sbjct: 71 IRNSNNSNEGTLLYVPRGVYLTQSFNLTSHMTLYLADGAVIKAVQDTEKWPLTDPLPSYG 130
Query: 124 RGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNS 183
RGRE PG RY+SFIHGDGL DVVITG NGTIDGQG WWNMWR TL FTRP LIEF NS
Sbjct: 131 RGREHPGRRYISFIHGDGLNDVVITGRNGTIDGQGEPWWNMWRHGTLKFTRPGLIEFNNS 190
Query: 184 RSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYI 243
+I++S+V+ QNSPFW +HPVYCSNVV+ +VTILAP DS NTDGIDPDSSSNVCIEDSYI
Sbjct: 191 TNILVSHVVLQNSPFWTLHPVYCSNVVVHHVTILAPTDSYNTDGIDPDSSSNVCIEDSYI 250
Query: 244 STGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHIN 303
STGDDLVAVKSGWDEYGIAY PS ITIRR+TGSSPF+GIA+GSETSGG++NV E+I
Sbjct: 251 STGDDLVAVKSGWDEYGIAYNRPSRDITIRRITGSSPFAGIAIGSETSGGIQNVTVENIT 310
Query: 304 LYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVN 363
LYN G+GIH+KTNIGRGG I+ IT+S VY+E R GIKI+GD GDHPDDKFN +ALP+V
Sbjct: 311 LYNSGIGIHIKTNIGRGGSIQGITISGVYLEKVRTGIKISGDTGDHPDDKFNTSALPIVR 370
Query: 364 GITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVK 423
GITIK+VWG KV+++G++QGLK+SPFT +C SN+ L G SP KCSDV G+A +V
Sbjct: 371 GITIKNVWGIKVERAGMVQGLKDSPFTNLCFSNVTLTGTK--RSPIWKCSDVVGAADKVN 428
Query: 424 PWPCSELS-SSQQTGACSNH 442
P PC ELS ++QQ G+C N
Sbjct: 429 PTPCPELSATTQQGGSCENQ 448
>gi|125553514|gb|EAY99223.1| hypothetical protein OsI_21181 [Oryza sativa Indica Group]
Length = 448
Score = 603 bits (1554), Expect = e-170, Method: Compositional matrix adjust.
Identities = 288/417 (69%), Positives = 345/417 (82%), Gaps = 4/417 (0%)
Query: 25 TCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYL 84
TC VP R IS+ FGGVGDG+ LNT AF A+ RI+ R GG LLYVP GV+L
Sbjct: 36 TCPADVPRR--GAWISVASFGGVGDGRALNTAAFARAVARIERRRARGGALLYVPAGVWL 93
Query: 85 TGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQD 144
TG FNLTSHMTL+LA+GAVI+ATQDT +WPLI PLPSYGRGRE PGGRYMS IHGDGLQD
Sbjct: 94 TGPFNLTSHMTLFLARGAVIRATQDTSSWPLIDPLPSYGRGRELPGGRYMSLIHGDGLQD 153
Query: 145 VVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPV 204
V ITGENGTIDGQG++WW+MWR+RTLPFTRP+L+E ++S +IISNV+FQ+SPFWNIHPV
Sbjct: 154 VFITGENGTIDGQGSVWWDMWRKRTLPFTRPHLLELISSTDVIISNVVFQDSPFWNIHPV 213
Query: 205 YCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYG 264
YCSNVVI VT+LAP DSPNTDGIDPDSSSNVCIEDSYISTGDDL+++KSGWDEYGIA+G
Sbjct: 214 YCSNVVITNVTVLAPHDSPNTDGIDPDSSSNVCIEDSYISTGDDLISIKSGWDEYGIAFG 273
Query: 265 HPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 324
PSSGITIRR+TGS PF+G AVGSETSGGVENV EH+N + +GVGIHVKTN GRGGFIR
Sbjct: 274 RPSSGITIRRITGSGPFAGFAVGSETSGGVENVHVEHLNFFGMGVGIHVKTNSGRGGFIR 333
Query: 325 NITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGL 384
NITVS+V + AR G++IAGDVG HPD ++P+ LPVV+G+TIK+VWG ++Q+GL++G+
Sbjct: 334 NITVSEVTLNGARYGLRIAGDVGGHPDASYDPSKLPVVDGVTIKNVWGQNIRQAGLVRGI 393
Query: 385 KNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSN 441
++S F+ ICLSN+ L G G + P KC VSG A V+P PC+EL+S+ + C+N
Sbjct: 394 RDSVFSRICLSNVKLYG--GDSVGPWKCRAVSGGALDVQPSPCAELTSTSEMSFCTN 448
>gi|115445377|ref|NP_001046468.1| Os02g0256100 [Oryza sativa Japonica Group]
gi|50251675|dbj|BAD29699.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|50252020|dbj|BAD27952.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113535999|dbj|BAF08382.1| Os02g0256100 [Oryza sativa Japonica Group]
gi|215686497|dbj|BAG87758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765347|dbj|BAG87044.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222622550|gb|EEE56682.1| hypothetical protein OsJ_06128 [Oryza sativa Japonica Group]
Length = 443
Score = 602 bits (1553), Expect = e-170, Method: Compositional matrix adjust.
Identities = 290/437 (66%), Positives = 349/437 (79%), Gaps = 3/437 (0%)
Query: 4 FLVTLSILLSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIY 63
F VT+ +++ C A TC+G VP R R + +SI +FGGVGDG+T+NT AF +A+Y
Sbjct: 9 FAVTVLLVVLLVQC-DAAEATTCAGAVPARPRPETVSIAEFGGVGDGRTVNTWAFHKAVY 67
Query: 64 RIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYG 123
RIQH RR GGT L VP G +LTGSFNLTSHMTL+LA+GAV+KATQ+T +WPL PLPSYG
Sbjct: 68 RIQHQRRRGGTTLLVPAGTWLTGSFNLTSHMTLFLARGAVLKATQETRSWPLAEPLPSYG 127
Query: 124 RGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNS 183
RGRE PG RY SFIHGDGL+D+VITG+ G IDGQG +WWNMWRQRTL TRPNL+EFM+S
Sbjct: 128 RGRELPGARYTSFIHGDGLRDIVITGDKGIIDGQGDVWWNMWRQRTLQHTRPNLLEFMHS 187
Query: 184 RSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYI 243
I ISN++ +NSPFWNIHPVYC NVVI + I+AP DSPNTDG+DPDSS+NVCIEDSYI
Sbjct: 188 SGIHISNIVLKNSPFWNIHPVYCDNVVITNMMIIAPHDSPNTDGVDPDSSTNVCIEDSYI 247
Query: 244 STGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHIN 303
STGDDLVA+KSGWDEYGIAYG PSSGITIRRV GSSPFSGIA+GSE SGGV NVL E +
Sbjct: 248 STGDDLVAIKSGWDEYGIAYGRPSSGITIRRVRGSSPFSGIAIGSEASGGVSNVLVEDCS 307
Query: 304 LYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVN 363
++N G GIH+KTNIGRGGFIRNITV +V M + R G++IAGDVGDHPD+ F+ ALP V+
Sbjct: 308 IFNSGYGIHIKTNIGRGGFIRNITVDNVRMNSVRNGLRIAGDVGDHPDEHFSQLALPTVD 367
Query: 364 GITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVK 423
++IK+VWG VQQ G I+G++NSPFT ICL+N+ L G + KC DV G+A V+
Sbjct: 368 AVSIKNVWGVNVQQPGSIEGIRNSPFTRICLANVKLFGWR--NNAAWKCRDVHGAALGVQ 425
Query: 424 PWPCSELSSSQQTGACS 440
P PC+EL++S +G CS
Sbjct: 426 PGPCAELTTSLSSGFCS 442
>gi|125538851|gb|EAY85246.1| hypothetical protein OsI_06620 [Oryza sativa Indica Group]
Length = 443
Score = 601 bits (1550), Expect = e-169, Method: Compositional matrix adjust.
Identities = 287/420 (68%), Positives = 341/420 (81%), Gaps = 2/420 (0%)
Query: 21 ASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPP 80
A TC+G VP R R + +SI +FGGVGDG+T+NT AF +A+YRIQH RR GGT L VP
Sbjct: 25 AETTTCAGAVPARPRPETVSIAEFGGVGDGRTVNTWAFHKAVYRIQHQRRRGGTTLLVPA 84
Query: 81 GVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGD 140
G +LTGSFNLTSHMTL+LA+GAV+KATQ+T +WPL PLPSYGRGRE PG RY SFIHGD
Sbjct: 85 GTWLTGSFNLTSHMTLFLARGAVLKATQETRSWPLAEPLPSYGRGRELPGARYASFIHGD 144
Query: 141 GLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWN 200
GL DVVITG+ G IDGQG +WWNMWRQRTL TRPNL+EFM+S I ISN++ +NSPFWN
Sbjct: 145 GLHDVVITGDKGIIDGQGDVWWNMWRQRTLQHTRPNLLEFMHSSGIHISNIVLKNSPFWN 204
Query: 201 IHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 260
IHPVYC NVVI + I+AP DSPNTDG+DPDSS+NVCIEDSYISTGDDLVA+KSGWDEYG
Sbjct: 205 IHPVYCDNVVITNMMIIAPHDSPNTDGVDPDSSTNVCIEDSYISTGDDLVAIKSGWDEYG 264
Query: 261 IAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 320
IAYG PSSGITIRRV GSSPFSGIA+GSE SGGV +VL E +++N G GIH+KTNIGRG
Sbjct: 265 IAYGRPSSGITIRRVRGSSPFSGIAIGSEASGGVSDVLVEDCSIFNSGYGIHIKTNIGRG 324
Query: 321 GFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL 380
GFIRNITV +V M + R G++IAGDVGDHPD+ F+ ALP V+G++IK+VWG VQQ G
Sbjct: 325 GFIRNITVDNVRMNSVRNGLRIAGDVGDHPDEHFSQLALPTVDGVSIKNVWGVNVQQPGS 384
Query: 381 IQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACS 440
I+G++NSPFT ICL+N+ L G + KC DV G+A V+P PC+EL++S +G CS
Sbjct: 385 IEGIRNSPFTRICLANVKLFGWR--NNAAWKCRDVHGAALGVQPGPCAELTTSLSSGFCS 442
>gi|115465733|ref|NP_001056466.1| Os05g0587000 [Oryza sativa Japonica Group]
gi|113580017|dbj|BAF18380.1| Os05g0587000 [Oryza sativa Japonica Group]
gi|125568884|gb|EAZ10399.1| hypothetical protein OsJ_00232 [Oryza sativa Japonica Group]
Length = 448
Score = 601 bits (1550), Expect = e-169, Method: Compositional matrix adjust.
Identities = 287/417 (68%), Positives = 345/417 (82%), Gaps = 4/417 (0%)
Query: 25 TCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYL 84
TC VP R +S+ FGGVGDG+ LNT AF A+ RI+ R GG LLYVP GV+L
Sbjct: 36 TCPADVPPR--GAWMSVASFGGVGDGRALNTAAFARAVARIERRRARGGALLYVPAGVWL 93
Query: 85 TGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQD 144
TG FNLTSHMTL+LA+GAVI+ATQDT +WPLI PLPSYGRGRE PGGRYMS IHGDGLQD
Sbjct: 94 TGPFNLTSHMTLFLARGAVIRATQDTSSWPLIDPLPSYGRGRELPGGRYMSLIHGDGLQD 153
Query: 145 VVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPV 204
V ITGENGTIDGQG++WW+MWR+RTLPFTRP+L+E ++S +IISNV+FQ+SPFWNIHPV
Sbjct: 154 VFITGENGTIDGQGSVWWDMWRKRTLPFTRPHLLELISSTDVIISNVVFQDSPFWNIHPV 213
Query: 205 YCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYG 264
YCSNVVI VT+LAP DSPNTDGIDPDSSSNVCIEDSYISTGDDL+++KSGWDEYGIA+G
Sbjct: 214 YCSNVVITNVTVLAPHDSPNTDGIDPDSSSNVCIEDSYISTGDDLISIKSGWDEYGIAFG 273
Query: 265 HPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 324
PSSGITIRR+TGS PF+G AVGSETSGGVENV EH+N + +GVGIHVKTN GRGGFIR
Sbjct: 274 RPSSGITIRRITGSGPFAGFAVGSETSGGVENVHVEHLNFFGMGVGIHVKTNSGRGGFIR 333
Query: 325 NITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGL 384
NITVS+V + AR G++IAGDVG HPD ++P+ LPVV+G+TIK+VWG ++Q+GL++G+
Sbjct: 334 NITVSEVTLNGARYGLRIAGDVGGHPDASYDPSKLPVVDGVTIKNVWGQNIRQAGLVRGI 393
Query: 385 KNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSN 441
++S F+ ICLSN+ L G G + P KC VSG A V+P PC+EL+S+ + C+N
Sbjct: 394 RDSVFSRICLSNVKLYG--GDSVGPWKCRAVSGGALDVQPSPCAELTSTSEMSFCTN 448
>gi|242091535|ref|XP_002441600.1| hypothetical protein SORBIDRAFT_09g030140 [Sorghum bicolor]
gi|241946885|gb|EES20030.1| hypothetical protein SORBIDRAFT_09g030140 [Sorghum bicolor]
Length = 439
Score = 594 bits (1532), Expect = e-167, Method: Compositional matrix adjust.
Identities = 284/412 (68%), Positives = 344/412 (83%), Gaps = 3/412 (0%)
Query: 31 PMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRS-GGTLLYVPPGVYLTGSFN 89
P R +S+ FG GDG+TLNT AF A+ RI+ R + GGTLLYVPPGV+LTG FN
Sbjct: 30 PAPLRGAWMSVASFGARGDGQTLNTGAFARAVARIERRRGARGGTLLYVPPGVWLTGPFN 89
Query: 90 LTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITG 149
LTSHMTL+LA+GAVI+ATQDT +WPLI PLPSYGRGRE PGGRYMS IHG+GLQDV ITG
Sbjct: 90 LTSHMTLFLARGAVIRATQDTSSWPLIDPLPSYGRGRELPGGRYMSLIHGNGLQDVFITG 149
Query: 150 ENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNV 209
ENGTIDGQG++WW+MW++RTLPFTRP+L+E M S +++SNV+FQ+SPFWNIHPVYCSNV
Sbjct: 150 ENGTIDGQGSLWWDMWKKRTLPFTRPHLLELMYSTDVVVSNVVFQDSPFWNIHPVYCSNV 209
Query: 210 VIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSG 269
VI VT+LAP DSPNTDGID DSSSNVCIEDSYIS GDDL+++KSGWDEYGIA+G PSSG
Sbjct: 210 VIANVTVLAPHDSPNTDGIDLDSSSNVCIEDSYISAGDDLISIKSGWDEYGIAFGRPSSG 269
Query: 270 ITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVS 329
ITIRR+TGS PF+G AVGSETSGGVENVL EH+NL+ +GVGIH+KTN GRGGFIRNITVS
Sbjct: 270 ITIRRITGSGPFAGFAVGSETSGGVENVLVEHLNLFGMGVGIHIKTNSGRGGFIRNITVS 329
Query: 330 DVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPF 389
+V + AR G++IAGDVG HPD +NP+ LPVVN +TIK+V G ++Q+GLI+G++NS F
Sbjct: 330 EVTLNGARYGLRIAGDVGGHPDASYNPSVLPVVNSVTIKNVLGQNIRQAGLIRGIRNSVF 389
Query: 390 TGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSN 441
+ ICLSN+ L G A + P KC VSG+A V+P PC+EL+S+ +TG C++
Sbjct: 390 SNICLSNVKLYGSA--SIGPWKCRAVSGAALDVQPSPCTELASTSETGFCTS 439
>gi|226504332|ref|NP_001141464.1| uncharacterized protein LOC100273574 precursor [Zea mays]
gi|194704686|gb|ACF86427.1| unknown [Zea mays]
gi|223949711|gb|ACN28939.1| unknown [Zea mays]
gi|413950643|gb|AFW83292.1| hypothetical protein ZEAMMB73_881856 [Zea mays]
gi|413950644|gb|AFW83293.1| hypothetical protein ZEAMMB73_881856 [Zea mays]
Length = 446
Score = 594 bits (1531), Expect = e-167, Method: Compositional matrix adjust.
Identities = 285/420 (67%), Positives = 339/420 (80%), Gaps = 3/420 (0%)
Query: 25 TCSGIVPMR-YRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVY 83
TCSG VP R ++S+ FGG GDG+TLNT AF A+ I+ GG LYVPPGV+
Sbjct: 29 TCSGTVPAPPRRGARVSVASFGGAGDGRTLNTAAFARAVASIERRAAPGGAELYVPPGVW 88
Query: 84 LTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQ 143
LTG FNLTS MTL+LA+GAVI+ATQDT +WPLI PLPSYGRGRE PGGRY S IHG+GLQ
Sbjct: 89 LTGPFNLTSRMTLFLARGAVIRATQDTSSWPLIEPLPSYGRGRELPGGRYTSLIHGNGLQ 148
Query: 144 DVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHP 203
DVVITGENGTIDGQG+ WW+MW+ RTL +TRP+L+E M+S II+SNV+FQ+SPFWNIHP
Sbjct: 149 DVVITGENGTIDGQGSAWWDMWKNRTLLYTRPHLLELMSSSDIIVSNVVFQDSPFWNIHP 208
Query: 204 VYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAY 263
VYCSNVVIR VTILAP DSPNTDGIDPDSSSN+CIED YISTGDD +A+KSGWDEYGIAY
Sbjct: 209 VYCSNVVIRNVTILAPHDSPNTDGIDPDSSSNICIEDCYISTGDDSIAIKSGWDEYGIAY 268
Query: 264 GHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFI 323
G SSGIT+RR+TGSSPF+G AVGSETSGGVENVLAEH+N +N G GIHVKTN GRGGFI
Sbjct: 269 GRASSGITVRRITGSSPFAGFAVGSETSGGVENVLAEHLNFFNSGFGIHVKTNTGRGGFI 328
Query: 324 RNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQG 383
RNITVSDV ++N R G++I GDVG+HPDD +N +ALP+V+ +T+K+V G V+++GLI+G
Sbjct: 329 RNITVSDVTLDNVRYGLRIVGDVGNHPDDSYNRSALPIVDALTVKNVQGQNVREAGLIKG 388
Query: 384 LKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSNHF 443
+ NS F+ ICLSN+ G G P KC VSG A V+P PC+EL+S+ T C+N
Sbjct: 389 IPNSAFSRICLSNVKFTG--GAPVRPWKCEAVSGGALDVQPSPCTELTSTSGTSFCTNSL 446
>gi|297801376|ref|XP_002868572.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297314408|gb|EFH44831.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 449
Score = 589 bits (1519), Expect = e-166, Method: Compositional matrix adjust.
Identities = 303/440 (68%), Positives = 354/440 (80%), Gaps = 6/440 (1%)
Query: 5 LVTLSILLSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYR 64
L LS +L + SL + +TCSGIVPM++R + +SI DFG VGDGKTLNT AF AI R
Sbjct: 13 LFLLSTVLPHH--LSLGAPITCSGIVPMKHRTEMLSIFDFGAVGDGKTLNTNAFNTAIDR 70
Query: 65 IQHLRRSG-GTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYG 123
I++ S GTLL+VP GVYLT SFNLTSHMTLYLA GAVIKA QDT W L PLPSYG
Sbjct: 71 IRNSNNSSQGTLLHVPRGVYLTQSFNLTSHMTLYLADGAVIKAVQDTGKWRLTDPLPSYG 130
Query: 124 RGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNS 183
RGRERPG RY+SFIHGDGL DVVITG NGTIDGQG WWNMWR TL FTRP LIEF NS
Sbjct: 131 RGRERPGRRYISFIHGDGLNDVVITGRNGTIDGQGEPWWNMWRHGTLEFTRPGLIEFKNS 190
Query: 184 RSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYI 243
+I++S+V+ QNS FW +HPVYCSNVV+ +VTILAP DS NTDGIDPDSSSNVCIEDSYI
Sbjct: 191 TNIVVSHVVLQNSAFWTLHPVYCSNVVVHHVTILAPTDSFNTDGIDPDSSSNVCIEDSYI 250
Query: 244 STGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHIN 303
STGDDLVAVKSGWDEYGIAY PS ITIRR+TGSSPF+GIA+GSETSGG++NV E+I
Sbjct: 251 STGDDLVAVKSGWDEYGIAYNLPSRDITIRRITGSSPFAGIAIGSETSGGIQNVTVENIT 310
Query: 304 LYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVN 363
LYN G+GIH+KTNIGRGG I+ IT+S VY+E R GIKI+GD GDHPDDKFN +ALP+V
Sbjct: 311 LYNSGIGIHIKTNIGRGGSIQGITISGVYLEKVRTGIKISGDTGDHPDDKFNTSALPIVR 370
Query: 364 GITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVK 423
GITIK+VWG KV+++G++QGLK+SPFT +C SN+ L G ++P KCSDV G+A +V
Sbjct: 371 GITIKNVWGIKVERAGMVQGLKDSPFTNLCFSNVTLTGTK--STPIWKCSDVVGAASKVN 428
Query: 424 PWPCSEL-SSSQQTGACSNH 442
P PC EL +++QQ G+C N
Sbjct: 429 PTPCPELTTTTQQGGSCENQ 448
>gi|242053639|ref|XP_002455965.1| hypothetical protein SORBIDRAFT_03g028140 [Sorghum bicolor]
gi|241927940|gb|EES01085.1| hypothetical protein SORBIDRAFT_03g028140 [Sorghum bicolor]
Length = 447
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 280/420 (66%), Positives = 340/420 (80%), Gaps = 3/420 (0%)
Query: 25 TCSGIVPMR-YRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVY 83
TCSG VP R ++S+ FGG GDG+TLNT AF A+ I+ GG LYVPPGV+
Sbjct: 30 TCSGAVPAPPRRGARVSVASFGGAGDGRTLNTAAFARAVATIERRAVPGGAELYVPPGVW 89
Query: 84 LTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQ 143
LTG FNLTS MTL+LA+GAV++ATQDT +WPLI PLPSYGRGRE PGGRY+S IHG GLQ
Sbjct: 90 LTGPFNLTSRMTLFLARGAVVRATQDTSSWPLIEPLPSYGRGRELPGGRYISLIHGSGLQ 149
Query: 144 DVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHP 203
DVVITGENGTIDGQG WW+MW++ TL +TRP+L+E M+S II+SNV+FQ+SPFWNIHP
Sbjct: 150 DVVITGENGTIDGQGTPWWDMWKKGTLLYTRPHLLELMSSSHIIVSNVVFQDSPFWNIHP 209
Query: 204 VYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAY 263
VYCSNVVIR VTILAP DSPNTDGIDPDSSSN+CIED YISTGDD +A+KSGWDEYGIAY
Sbjct: 210 VYCSNVVIRNVTILAPHDSPNTDGIDPDSSSNICIEDCYISTGDDAIAIKSGWDEYGIAY 269
Query: 264 GHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFI 323
G PSS IT+RR+TGSSPF+G AVGSETSGGVENVLAEH+N ++ G GIH+KTN GRGGFI
Sbjct: 270 GRPSSDITVRRITGSSPFAGFAVGSETSGGVENVLAEHLNFFSSGFGIHIKTNTGRGGFI 329
Query: 324 RNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQG 383
RN+TVSDV ++N R G++I GDVG+HPD+++N +ALP+V+ +TIK+V G ++++GLI+G
Sbjct: 330 RNVTVSDVTLDNVRYGLRIVGDVGNHPDERYNRSALPIVDALTIKNVQGQNIKEAGLIKG 389
Query: 384 LKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSNHF 443
+ NS F+ ICLSN+ L G G P KC VSG A V+P PC+EL+S+ T C+N
Sbjct: 390 IANSAFSRICLSNVKLTG--GAPVQPWKCEAVSGGALDVQPSPCTELTSTSGTSFCTNSL 447
>gi|48475087|gb|AAT44156.1| putative polygalacturonase [Oryza sativa Japonica Group]
Length = 474
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 287/443 (64%), Positives = 345/443 (77%), Gaps = 30/443 (6%)
Query: 25 TCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYL 84
TC VP R +S+ FGGVGDG+ LNT AF A+ RI+ R GG LLYVP GV+L
Sbjct: 36 TCPADVPPR--GAWMSVASFGGVGDGRALNTAAFARAVARIERRRARGGALLYVPAGVWL 93
Query: 85 TGSFNLTSHMTLYLAKGAVIKATQ--------------------------DTWNWPLIAP 118
TG FNLTSHMTL+LA+GAVI+ATQ DT +WPLI P
Sbjct: 94 TGPFNLTSHMTLFLARGAVIRATQAIAMAMSFFYLQDLSSSSCRAFVLDQDTSSWPLIDP 153
Query: 119 LPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLI 178
LPSYGRGRE PGGRYMS IHGDGLQDV ITGENGTIDGQG++WW+MWR+RTLPFTRP+L+
Sbjct: 154 LPSYGRGRELPGGRYMSLIHGDGLQDVFITGENGTIDGQGSVWWDMWRKRTLPFTRPHLL 213
Query: 179 EFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCI 238
E ++S +IISNV+FQ+SPFWNIHPVYCSNVVI VT+LAP DSPNTDGIDPDSSSNVCI
Sbjct: 214 ELISSTDVIISNVVFQDSPFWNIHPVYCSNVVITNVTVLAPHDSPNTDGIDPDSSSNVCI 273
Query: 239 EDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVL 298
EDSYISTGDDL+++KSGWDEYGIA+G PSSGITIRR+TGS PF+G AVGSETSGGVENV
Sbjct: 274 EDSYISTGDDLISIKSGWDEYGIAFGRPSSGITIRRITGSGPFAGFAVGSETSGGVENVH 333
Query: 299 AEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNA 358
EH+N + +GVGIHVKTN GRGGFIRNITVS+V + AR G++IAGDVG HPD ++P+
Sbjct: 334 VEHLNFFGMGVGIHVKTNSGRGGFIRNITVSEVTLNGARYGLRIAGDVGGHPDASYDPSK 393
Query: 359 LPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGS 418
LPVV+G+TIK+VWG ++Q+GL++G+++S F+ ICLSN+ L G G + P KC VSG
Sbjct: 394 LPVVDGVTIKNVWGQNIRQAGLVRGIRDSVFSRICLSNVKLYG--GDSVGPWKCRAVSGG 451
Query: 419 AYQVKPWPCSELSSSQQTGACSN 441
A V+P PC+EL+S+ + C+N
Sbjct: 452 ALDVQPSPCAELTSTSEMSFCTN 474
>gi|242061204|ref|XP_002451891.1| hypothetical protein SORBIDRAFT_04g009310 [Sorghum bicolor]
gi|241931722|gb|EES04867.1| hypothetical protein SORBIDRAFT_04g009310 [Sorghum bicolor]
Length = 448
Score = 583 bits (1503), Expect = e-164, Method: Compositional matrix adjust.
Identities = 276/417 (66%), Positives = 336/417 (80%), Gaps = 2/417 (0%)
Query: 25 TCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYL 84
+C+G+ P ++R + ISITDFGGVGDG+TLNT AFR+A+YRIQH RR GGT L+VP G +L
Sbjct: 31 SCAGVAPAKHRPEAISITDFGGVGDGRTLNTWAFRKAVYRIQHQRRRGGTTLHVPAGTWL 90
Query: 85 TGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQD 144
TGSFNLTSHMTL+LA+GAV+KATQDT WPL+ PLPSYGRGRE PG RY SFIHG+GL+D
Sbjct: 91 TGSFNLTSHMTLFLARGAVLKATQDTRRWPLMEPLPSYGRGRELPGARYASFIHGNGLRD 150
Query: 145 VVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPV 204
V ITG+ G IDGQG +WWNMWR+RTL TRPNL+EFM+S I ISN++ +NSPFWNIHPV
Sbjct: 151 VAITGDKGVIDGQGEVWWNMWRRRTLEHTRPNLVEFMHSTGIHISNIVLKNSPFWNIHPV 210
Query: 205 YCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYG 264
YC NVV+ + ILAP DSPNTDGIDPDSSSNVCIEDSYISTGDDLVA+KSGWDEYGIAYG
Sbjct: 211 YCDNVVVTNMMILAPHDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAIKSGWDEYGIAYG 270
Query: 265 HPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 324
PSSGITIRRV GSSPFSGIA+GSE SGGV +VL E ++++ G GIH+KTN+GRGG+IR
Sbjct: 271 RPSSGITIRRVRGSSPFSGIAIGSEASGGVRDVLVEDCSIFDSGYGIHIKTNVGRGGYIR 330
Query: 325 NITVSDVYMENAR-KGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQG 383
N+TV +V M R G++IAGDVGDHPD F+ A+P+V+ + I +VWG VQ G ++G
Sbjct: 331 NVTVDNVRMSGVRISGVRIAGDVGDHPDAHFSQLAVPLVDAVRISNVWGVNVQHPGSLEG 390
Query: 384 LKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACS 440
+++SPFT ICLSN+ L G +C DV G+A V+P PC+EL++S + S
Sbjct: 391 IRSSPFTRICLSNVKLFGWR-KNDAAWRCRDVRGAALGVQPSPCAELATSFASAGSS 446
>gi|293332875|ref|NP_001170283.1| uncharacterized protein LOC100384246 precursor [Zea mays]
gi|224028521|gb|ACN33336.1| unknown [Zea mays]
gi|413925951|gb|AFW65883.1| hypothetical protein ZEAMMB73_311601 [Zea mays]
Length = 451
Score = 579 bits (1493), Expect = e-163, Method: Compositional matrix adjust.
Identities = 271/406 (66%), Positives = 328/406 (80%), Gaps = 2/406 (0%)
Query: 28 GIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGS 87
G+ P ++R + ISI DFGGVGDG+TLNT AFR+A+YRIQH RR GGT L+VP G +L GS
Sbjct: 39 GLAPAKHRPEVISIADFGGVGDGRTLNTWAFRKAVYRIQHQRRRGGTTLHVPAGTWLAGS 98
Query: 88 FNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVI 147
FNLTSHMTL+LA+GAV+KATQDT WPL+ PLPSYGRGRE PG RY SFIHGDGL+DVVI
Sbjct: 99 FNLTSHMTLFLARGAVLKATQDTRGWPLVEPLPSYGRGRELPGPRYASFIHGDGLRDVVI 158
Query: 148 TGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCS 207
TG+ G IDGQG +WWNMWR+RTL TRPNL+EFM+S I ISN++ +NSPFWNIHPVYC
Sbjct: 159 TGDRGVIDGQGEVWWNMWRRRTLEHTRPNLVEFMHSTGIHISNIVLKNSPFWNIHPVYCD 218
Query: 208 NVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPS 267
NVV+ + ILAP DSPNTDG+DPDSSSNVCIEDSYISTGDDLVA+KSGWDEYGIAYG PS
Sbjct: 219 NVVVTNMMILAPRDSPNTDGVDPDSSSNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPS 278
Query: 268 SGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 327
+G+T+RRV GSSPFSGIA+GSE SGGV +VL E +++ G GIH+KTN+GRGG+IRN+T
Sbjct: 279 AGVTVRRVRGSSPFSGIAIGSEASGGVRDVLVEDCAIFDSGYGIHIKTNVGRGGYIRNVT 338
Query: 328 VSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS 387
V V + R G++IAGDVGDHPD F+ A+P V+ + I +VWG VQQ G ++G++ S
Sbjct: 339 VDGVRLTGVRSGVRIAGDVGDHPDAHFSQLAVPTVDAVRISNVWGVNVQQPGSLEGIRAS 398
Query: 388 PFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSS 433
PFT ICLSN+ L G + KC DV G+A V+P PC+EL++S
Sbjct: 399 PFTRICLSNVKLFGWR--SDAAWKCRDVRGAALGVQPSPCAELATS 442
>gi|357135554|ref|XP_003569374.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 448
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 281/420 (66%), Positives = 342/420 (81%), Gaps = 3/420 (0%)
Query: 25 TCSGIVPMR-YRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVY 83
TCSG VP R + +S+ FGG GDG+TLNT AF A+ I+ R GG LLYVPPGV+
Sbjct: 31 TCSGAVPAPPKRGEWVSVASFGGAGDGRTLNTAAFAAAVASIERRRAPGGGLLYVPPGVW 90
Query: 84 LTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQ 143
LTG FNLTSHMTL+L++GAVI+ATQDT +WPLI PLPSYGRGRE PG RY S IHG+GLQ
Sbjct: 91 LTGPFNLTSHMTLFLSRGAVIRATQDTSSWPLIDPLPSYGRGREMPGKRYKSLIHGNGLQ 150
Query: 144 DVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHP 203
DV ITG NGTIDGQG++WW+MW++ TLPFTRP+L+E M+S +I+SN++F++SPFWNIHP
Sbjct: 151 DVFITGANGTIDGQGSVWWDMWKKGTLPFTRPHLLELMDSSDVIVSNLVFRDSPFWNIHP 210
Query: 204 VYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAY 263
VYCSNVVIR +TILAP DSPNTDGIDPDSSSNVCIED YISTGDDLVA+KSGWDEYGIAY
Sbjct: 211 VYCSNVVIRNLTILAPHDSPNTDGIDPDSSSNVCIEDCYISTGDDLVAIKSGWDEYGIAY 270
Query: 264 GHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFI 323
G PSS IT+RR+TGSSPF+G AVGSETSGGVENVLAEH+N ++ G G+H+KTN GRGGFI
Sbjct: 271 GRPSSDITVRRITGSSPFAGFAVGSETSGGVENVLAEHLNFFSSGFGVHIKTNSGRGGFI 330
Query: 324 RNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQG 383
RN+TVSDV ++N R G++IAGDVGDHPD+ +N NALP V+ +TIK+V G ++++G I+G
Sbjct: 331 RNVTVSDVTLDNVRYGLRIAGDVGDHPDEHYNHNALPKVDSLTIKNVQGQNIKEAGSIKG 390
Query: 384 LKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSNHF 443
+ +S F+ ICLSNI L G P P KC VSG A ++P PC+EL+S+ T C+N
Sbjct: 391 IASSAFSRICLSNIKLHGSV-PVR-PWKCESVSGGALDLQPSPCTELTSTSGTSFCTNSL 448
>gi|326496364|dbj|BAJ94644.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326509249|dbj|BAJ91541.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510305|dbj|BAJ87369.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518514|dbj|BAJ88286.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 450
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 285/420 (67%), Positives = 341/420 (81%), Gaps = 3/420 (0%)
Query: 25 TCSGIVPMR-YRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVY 83
TCSG P R +SI FGG GDG+TLNT AF A+ I R GG LLYVPPGV+
Sbjct: 33 TCSGAAPAPPKRGAWMSIASFGGAGDGRTLNTAAFAAAVASIARRRARGGALLYVPPGVW 92
Query: 84 LTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQ 143
LTG F+LTSHMTL+LA+GAVI+ATQDT +WPLI PLPSYGRGRE PG RY+S IHG+GLQ
Sbjct: 93 LTGPFSLTSHMTLFLARGAVIRATQDTSSWPLIDPLPSYGRGRELPGKRYISLIHGNGLQ 152
Query: 144 DVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHP 203
DV ITGENGTIDGQG++WW+MW++ TLPFTRP+L+E M+S + I+SN++FQ+SPFWNIHP
Sbjct: 153 DVFITGENGTIDGQGSVWWDMWKKGTLPFTRPHLLELMDSSNAIVSNLVFQDSPFWNIHP 212
Query: 204 VYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAY 263
VYCSNVVIR +TILAP DSPNTDGIDPDSSSNVCIED YISTGDDL+A+KSGWDEYGIAY
Sbjct: 213 VYCSNVVIRNLTILAPHDSPNTDGIDPDSSSNVCIEDCYISTGDDLIAIKSGWDEYGIAY 272
Query: 264 GHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFI 323
G PSS ITIRR+TGSSPF+G +VGSETSGGVENVLAEH+N Y+ G G+H+KTN GRGGFI
Sbjct: 273 GRPSSDITIRRITGSSPFAGFSVGSETSGGVENVLAEHLNFYSSGFGVHIKTNSGRGGFI 332
Query: 324 RNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQG 383
RNITVSDV ++N R G++IAGDVG HPD+++N NALP+V+ + IK+V G ++++GLI+G
Sbjct: 333 RNITVSDVILDNVRYGLRIAGDVGGHPDERYNHNALPIVDSLMIKNVQGQNIKEAGLIKG 392
Query: 384 LKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSNHF 443
+ NS F+ ICLSNI L G A P P KC VSG A V+P PC+EL+S C+N
Sbjct: 393 IPNSAFSRICLSNIKLHGSA-PVR-PWKCQAVSGGALDVQPSPCTELTSMSGMSFCTNSL 450
>gi|326488219|dbj|BAJ89948.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 450
Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust.
Identities = 284/420 (67%), Positives = 341/420 (81%), Gaps = 3/420 (0%)
Query: 25 TCSGIVPMR-YRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVY 83
TCSG P R +S+ FGG GDG+TLNT AF A+ I R GG LLYVPPGV+
Sbjct: 33 TCSGAAPAPPKRGAWMSVASFGGAGDGRTLNTAAFAAAVASIARRRARGGALLYVPPGVW 92
Query: 84 LTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQ 143
LTG F+LTSHMTL+LA+GAVI+ATQDT +WPLI PLPSYGRGRE PG RY+S IHG+GLQ
Sbjct: 93 LTGPFSLTSHMTLFLARGAVIRATQDTSSWPLIDPLPSYGRGRELPGKRYISLIHGNGLQ 152
Query: 144 DVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHP 203
DV ITGENGTIDGQG++WW+MW++ TLPFTRP+L+E M+S + I+SN++FQ+SPFWNIHP
Sbjct: 153 DVFITGENGTIDGQGSVWWDMWKKGTLPFTRPHLLELMDSSNAIVSNLVFQDSPFWNIHP 212
Query: 204 VYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAY 263
VYCSNVVIR +TILAP DSPNTDGIDPDSSSNVCIED YISTGDDL+A+KSGWDEYGIAY
Sbjct: 213 VYCSNVVIRNLTILAPHDSPNTDGIDPDSSSNVCIEDCYISTGDDLIAIKSGWDEYGIAY 272
Query: 264 GHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFI 323
G PSS ITIRR+TGSSPF+G +VGSETSGGVENVLAEH+N Y+ G G+H+KTN GRGGFI
Sbjct: 273 GRPSSDITIRRITGSSPFAGFSVGSETSGGVENVLAEHLNFYSSGFGVHIKTNSGRGGFI 332
Query: 324 RNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQG 383
RNITVSDV ++N R G++IAGDVG HPD+++N NALP+V+ + IK+V G ++++GLI+G
Sbjct: 333 RNITVSDVILDNVRYGLRIAGDVGGHPDERYNHNALPIVDSLMIKNVQGQNIKEAGLIKG 392
Query: 384 LKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSNHF 443
+ NS F+ ICLSNI L G A P P KC VSG A V+P PC+EL+S C+N
Sbjct: 393 IPNSAFSRICLSNIKLHGSA-PVR-PWKCQAVSGGALDVQPSPCTELTSMSGMSFCTNSL 450
>gi|125526876|gb|EAY74990.1| hypothetical protein OsI_02888 [Oryza sativa Indica Group]
Length = 445
Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust.
Identities = 280/421 (66%), Positives = 343/421 (81%), Gaps = 4/421 (0%)
Query: 25 TCSGIVPMRYRNDK-ISITDFGGVGDG-KTLNTKAFREAIYRIQHLRRSGGTLLYVPPGV 82
TCS +VP R +S+ FGG G +TL+T AF+ A+ I+ R GG LLYVPPGV
Sbjct: 27 TCSDMVPAAPRRGAWMSLASFGGGGGDGRTLSTAAFQAAVASIERRRAPGGALLYVPPGV 86
Query: 83 YLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGL 142
+LTG FNLTSHMTL+LA+GAVI+ATQDT +WPLI PL SYGRGRE PGGRYMS IHG+GL
Sbjct: 87 WLTGPFNLTSHMTLFLARGAVIRATQDTSSWPLIEPLLSYGRGRELPGGRYMSLIHGNGL 146
Query: 143 QDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIH 202
QDVVITG+NGTIDGQG+ WW+MW++ TLPFTRP+L+E MNS +++SNV+FQ+SPFWNIH
Sbjct: 147 QDVVITGDNGTIDGQGSAWWDMWKKGTLPFTRPHLLELMNSSDVVVSNVVFQDSPFWNIH 206
Query: 203 PVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA 262
PVYCSNVVIR VT+LAP DSPNTDGIDPDSSSNVCIED YISTGDDL+A+KSGWDEYG+A
Sbjct: 207 PVYCSNVVIRNVTVLAPHDSPNTDGIDPDSSSNVCIEDCYISTGDDLIAIKSGWDEYGMA 266
Query: 263 YGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGF 322
YG PSS ITIRR+TGSSPF+G AVGSETSGGVE+VLAEH+N ++ G GIH+KTN GRGGF
Sbjct: 267 YGRPSSHITIRRITGSSPFAGFAVGSETSGGVEHVLAEHLNFFSSGFGIHIKTNTGRGGF 326
Query: 323 IRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQ 382
IRN+TVSDV +++ R G++IAGDVG HPDD+++ NALPVV+G+TIK+V G ++++G I+
Sbjct: 327 IRNVTVSDVTLDSVRYGLRIAGDVGGHPDDRYDRNALPVVDGLTIKNVQGQNIREAGSIK 386
Query: 383 GLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSNH 442
G+ S F+ ICLSN+ L G G P KC VSG+A V+P PC+EL+S+ C+N
Sbjct: 387 GIATSAFSRICLSNVKLNG--GAAVRPWKCEAVSGAALDVQPSPCTELTSTSGMSFCTNS 444
Query: 443 F 443
Sbjct: 445 L 445
>gi|226509250|ref|NP_001149385.1| LOC100283011 precursor [Zea mays]
gi|195626846|gb|ACG35253.1| polygalacturonase [Zea mays]
Length = 446
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 262/411 (63%), Positives = 329/411 (80%), Gaps = 1/411 (0%)
Query: 31 PMRYRNDKISITDFGGVGDGKTLNT-KAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFN 89
P R +S+ FG GDG+TLNT R + GGTLLYVPPGV+LTG FN
Sbjct: 36 PAPRRGAWMSVASFGARGDGQTLNTGAFARAVARIARRRGARGGTLLYVPPGVWLTGPFN 95
Query: 90 LTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITG 149
LTSHMTL+LA+GA+++ATQDT +WPLI PLP YGRGRE PGGRYMS IHG GLQDV ITG
Sbjct: 96 LTSHMTLFLARGAIVRATQDTSSWPLIDPLPXYGRGRELPGGRYMSLIHGHGLQDVFITG 155
Query: 150 ENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNV 209
ENGTIDGQG +WW+MW++RTLPFTRP+L+E M S +++SN++FQ+SPFWNIHPVYCSNV
Sbjct: 156 ENGTIDGQGGVWWDMWKKRTLPFTRPHLLELMYSTDVVVSNLVFQDSPFWNIHPVYCSNV 215
Query: 210 VIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSG 269
VI +T+LAP DSPNTDGID DSSSNVC+ED YIS GDDL+++KSGWDEYG+A+G PSSG
Sbjct: 216 VIANLTVLAPHDSPNTDGIDLDSSSNVCVEDCYISAGDDLISIKSGWDEYGVAFGRPSSG 275
Query: 270 ITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVS 329
IT+RR+TGS PF+G AVGSETSGGVE+V+AEH++ VGVG+HVKTN GRGGFIRN+TVS
Sbjct: 276 ITVRRITGSGPFAGFAVGSETSGGVEDVVAEHLSFSGVGVGVHVKTNSGRGGFIRNVTVS 335
Query: 330 DVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPF 389
V ++ AR G++IAGDVG HP +N + LPVV+G+ +++VWG V+Q+GLI+G+++S F
Sbjct: 336 QVTLDGARYGLRIAGDVGGHPGASYNASLLPVVDGVAVRNVWGRNVRQAGLIRGIRDSVF 395
Query: 390 TGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACS 440
+ ICLSN+ L G+ + P +C VSGSA V+P PC+EL+S+ TG C+
Sbjct: 396 SNICLSNVKLYGIGSDSIGPWRCRAVSGSALDVQPSPCAELASTSGTGFCT 446
>gi|413948635|gb|AFW81284.1| hypothetical protein ZEAMMB73_960645 [Zea mays]
Length = 458
Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust.
Identities = 262/423 (61%), Positives = 330/423 (78%), Gaps = 13/423 (3%)
Query: 31 PMRYRNDKISITDFGGVGDGKTLNT-KAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFN 89
P R +S+ FG GDG+TLNT R + GGTLLYVPPGV+LTG FN
Sbjct: 36 PAPRRGAWMSVASFGARGDGQTLNTGAFARAVARIARRRGARGGTLLYVPPGVWLTGPFN 95
Query: 90 LTSHMTLYLAKGAVIKATQ------------DTWNWPLIAPLPSYGRGRERPGGRYMSFI 137
LTSHMTL+LA+GA+++ATQ DT +WPLI PLPSYGRGRE PGGRYMS I
Sbjct: 96 LTSHMTLFLARGAIVRATQPCLATIELISEQDTSSWPLIDPLPSYGRGRELPGGRYMSLI 155
Query: 138 HGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSP 197
HG GLQDV ITGENGTIDGQG +WW+MW++RTLPFTRP+L+E M S +++SN++FQ+SP
Sbjct: 156 HGHGLQDVFITGENGTIDGQGGVWWDMWKKRTLPFTRPHLLELMYSTDVVVSNLVFQDSP 215
Query: 198 FWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWD 257
FWNIHPVYCSNVVI +T+LAP DSPNTDGID DSSSNVC+ED YIS GDDL+++KSGWD
Sbjct: 216 FWNIHPVYCSNVVIANLTVLAPHDSPNTDGIDLDSSSNVCVEDCYISAGDDLISIKSGWD 275
Query: 258 EYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNI 317
EYG+A+G PSSGIT+RR+TGS PF+G AVGSETSGGVE+V+AEH++ VGVG+HVKTN
Sbjct: 276 EYGVAFGRPSSGITVRRITGSGPFAGFAVGSETSGGVEDVVAEHLSFSGVGVGVHVKTNS 335
Query: 318 GRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQ 377
GRGGFIRN+TVS V ++ AR G++IAGDVG HP +N + LPV++G+ +++VWG V+Q
Sbjct: 336 GRGGFIRNVTVSQVTLDGARYGLRIAGDVGGHPGASYNASLLPVIDGVAVRNVWGRNVRQ 395
Query: 378 SGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTG 437
+GLI+G+++S F+ ICLSN+ L G+ + P +C VSGSA V+P PC+EL+S+ TG
Sbjct: 396 AGLIRGIRDSVFSNICLSNVKLYGIGSDSIGPWRCRAVSGSALDVQPSPCAELASTSGTG 455
Query: 438 ACS 440
C+
Sbjct: 456 FCT 458
>gi|125571200|gb|EAZ12715.1| hypothetical protein OsJ_02632 [Oryza sativa Japonica Group]
Length = 419
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 258/421 (61%), Positives = 320/421 (76%), Gaps = 30/421 (7%)
Query: 25 TCSGIVPMRYRNDK-ISITDFGGVGDG-KTLNTKAFREAIYRIQHLRRSGGTLLYVPPGV 82
TCS +VP R +S+ FGG G +TL+T AF+ A+ I+ R GG LLYVPPGV
Sbjct: 27 TCSDMVPAAPRRGAWMSLASFGGGGGDGRTLSTAAFQAAVASIERRRAPGGALLYVPPGV 86
Query: 83 YLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGL 142
+LTG FNLTSHMTL+LA+GAVI+ATQDT +WPLI PLPSYGRGRE PGGRYMS IHG+GL
Sbjct: 87 WLTGPFNLTSHMTLFLARGAVIRATQDTSSWPLIEPLPSYGRGRELPGGRYMSLIHGNGL 146
Query: 143 QDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIH 202
QDVVITG+NGTIDGQG+ WW+MW++ TLPFTRP+L+E MNS +++SNV+FQ+SPFWNIH
Sbjct: 147 QDVVITGDNGTIDGQGSAWWDMWKKGTLPFTRPHLLELMNSSDVVVSNVVFQDSPFWNIH 206
Query: 203 PVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA 262
PVYC SSNVCIED YISTGDDL+A+KSGWDEYG+A
Sbjct: 207 PVYC--------------------------SSNVCIEDCYISTGDDLIAIKSGWDEYGMA 240
Query: 263 YGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGF 322
YG PSS ITIRR+TGSSPF+G AVGSETSGGVE+VLAEH+N ++ G GIH+KTN GRGGF
Sbjct: 241 YGRPSSHITIRRITGSSPFAGFAVGSETSGGVEHVLAEHLNFFSSGFGIHIKTNTGRGGF 300
Query: 323 IRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQ 382
IRN+TVSDV +++ R G++IAGDVG HPDD+++ NALPVV+G+TIK+V G ++++G I+
Sbjct: 301 IRNVTVSDVTLDSVRYGLRIAGDVGGHPDDRYDRNALPVVDGLTIKNVQGQNIREAGSIK 360
Query: 383 GLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSNH 442
G+ S F+ ICLSN+ L G G P KC VSG+A V+P PC+EL+S+ C+N
Sbjct: 361 GIATSAFSRICLSNVKLNG--GAAVRPWKCEAVSGAALDVQPSPCTELTSTSGMSFCTNS 418
Query: 443 F 443
Sbjct: 419 L 419
>gi|224034791|gb|ACN36471.1| unknown [Zea mays]
Length = 347
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 226/340 (66%), Positives = 274/340 (80%), Gaps = 2/340 (0%)
Query: 94 MTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGT 153
MTL+LA+GAV+KATQDT WPL+ PLPSYGRGRE PG RY SFIHGDGL+DVVITG+ G
Sbjct: 1 MTLFLARGAVLKATQDTRGWPLVEPLPSYGRGRELPGPRYASFIHGDGLRDVVITGDRGV 60
Query: 154 IDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRY 213
IDGQG +WWNMWR+RTL TRPNL+EFM+S I ISN++ +NSPFWNIHPVYC NVV+
Sbjct: 61 IDGQGEVWWNMWRRRTLEHTRPNLVEFMHSTGIHISNIVLKNSPFWNIHPVYCDNVVVTN 120
Query: 214 VTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIR 273
+ ILAP DSPNTDG+DPDSSSNVCIEDSYISTGDDLVA+KSGWDEYGIAYG PS+G+T+R
Sbjct: 121 MMILAPRDSPNTDGVDPDSSSNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSAGVTVR 180
Query: 274 RVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
RV GSSPFSGIA+GSE SGGV +VL E +++ G GIH+KTN+GRGG+IRN+TV V +
Sbjct: 181 RVRGSSPFSGIAIGSEASGGVRDVLVEDCAIFDSGYGIHIKTNVGRGGYIRNVTVDGVRL 240
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
R G++IAGDVGDHPD F+ A+P V+ + I +VWG VQQ G ++G++ SPFT IC
Sbjct: 241 TGVRSGVRIAGDVGDHPDAHFSQLAVPTVDAVRISNVWGVNVQQPGSLEGIRASPFTRIC 300
Query: 394 LSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSS 433
LSN+ L G + KC DV G+A V+P PC+EL++S
Sbjct: 301 LSNVKLFGWR--SDAAWKCRDVRGAALGVQPSPCAELATS 338
>gi|357511567|ref|XP_003626072.1| Polygalacturonase [Medicago truncatula]
gi|355501087|gb|AES82290.1| Polygalacturonase [Medicago truncatula]
Length = 466
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 230/442 (52%), Positives = 305/442 (69%), Gaps = 6/442 (1%)
Query: 5 LVTLSILLSYFNCFS--LASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAI 62
LV + ++L+ F C S + S C + R +SIT+FG VGDG TLNTKAF+ AI
Sbjct: 7 LVDVFLVLALFCCSSWKVWSSTLCKETNLDKVRPHSVSITEFGAVGDGITLNTKAFQNAI 66
Query: 63 YRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSY 122
+ + GG L+VP G +LTGSF+L SH+TL+L K A+I + ++ +WP++ PLPSY
Sbjct: 67 FYLNSFSDKGGAKLFVPAGRWLTGSFDLISHLTLWLDKDAIILGSTNSEDWPVVDPLPSY 126
Query: 123 GRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMN 182
GRGRE PGGR+ S I+G L DV+ITG G IDGQG+IWW+M+R +TL +TRP+L+E MN
Sbjct: 127 GRGRELPGGRHRSLIYGCNLTDVIITGNEGIIDGQGSIWWSMFRNKTLDYTRPHLVELMN 186
Query: 183 SRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSY 242
S ++ISN+ F NSPFW IHPVYCS V ++ VTILAP DSPNTDGIDPDSS +VCIED Y
Sbjct: 187 STRVLISNLTFLNSPFWTIHPVYCSQVTVQNVTILAPLDSPNTDGIDPDSSDDVCIEDCY 246
Query: 243 ISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEH 301
ISTGDDL+A+KSGWDEYGIA+G PS+ I I R+ G + S GIA+GSE SGGV +V AE
Sbjct: 247 ISTGDDLIAIKSGWDEYGIAFGRPSTNIVIHRLVGKTHTSAGIAIGSEMSGGVSDVRAED 306
Query: 302 INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPV 361
I+ Y+ I +KT+ GRGG++RNI V+++ + N I+ G GDHPDD ++PNALPV
Sbjct: 307 IHFYDSYTAIRIKTSPGRGGYVRNIYVTNMTLANVDIAIRFTGSYGDHPDDAYDPNALPV 366
Query: 362 VNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQ 421
+ ITI+DV G + ++GLI+G++ F ICLSNI L ++ P CS++ G +
Sbjct: 367 IEKITIEDVIGENITKAGLIEGIEGDNFVNICLSNITLN---VSSNYPWNCSNIRGYSDM 423
Query: 422 VKPWPCSELSSSQQTGACSNHF 443
V P C L CS+ +
Sbjct: 424 VFPEACEPLKERIFPDHCSDCY 445
>gi|356572848|ref|XP_003554577.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 467
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 229/409 (55%), Positives = 287/409 (70%), Gaps = 3/409 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R +SIT+FG VGDG TLNTKAF+ AI+ + GG L+VP G +LTGSF+L SH+
Sbjct: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGRWLTGSFDLISHL 98
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL+L K AVI + + +WP++ PLPSYGRGRE PGGR+ S I+G L DV+ITG NGTI
Sbjct: 99 TLWLDKDAVILGSTNPEDWPVVDPLPSYGRGRELPGGRHKSLIYGHNLTDVIITGNNGTI 158
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQG+IWWN + RTL +TRP+L+E MNS ++ISN+ F NSPFW IHPVYCS V ++ V
Sbjct: 159 DGQGSIWWNRFMNRTLDYTRPHLVELMNSTGVLISNLTFLNSPFWTIHPVYCSQVTVQNV 218
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
ILAP DSPNTDGIDPDSS NVCIED YISTGDDL+A+KSGWDEYGIAYG PS+ I I R
Sbjct: 219 RILAPHDSPNTDGIDPDSSDNVCIEDCYISTGDDLIAIKSGWDEYGIAYGRPSTNIIIHR 278
Query: 275 VTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYME 334
+ G + SGIA+GSE SGGV V AE I Y+ GI +KT+ GRGG++RNI VS+V +
Sbjct: 279 LVGKTQTSGIAIGSEMSGGVSEVHAEDIQFYDSYNGIRIKTSPGRGGYVRNIYVSNVSLA 338
Query: 335 NARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICL 394
N I G G+HPDD ++PNALPV+ +TIKDV G ++ +GLI+G++ F ICL
Sbjct: 339 NVDIAIWFTGSYGEHPDDAYDPNALPVIEKVTIKDVVGENIKTAGLIEGIEGDNFVNICL 398
Query: 395 SNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSNHF 443
SNI L + + P CS V G + V+P C L CS+ +
Sbjct: 399 SNIILNVTS---NYPWNCSYVKGYSDLVQPEACEPLKERIFPDHCSDCY 444
>gi|359807069|ref|NP_001241086.1| uncharacterized protein LOC100817309 precursor [Glycine max]
gi|255636991|gb|ACU18828.1| unknown [Glycine max]
Length = 467
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 230/409 (56%), Positives = 286/409 (69%), Gaps = 3/409 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R +SIT+FG VGDG TLNTKAF+ AI+ + GG L+VP G +LTGSF+L SH+
Sbjct: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGRWLTGSFDLISHL 98
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL L K AVI + + +WP++ PLPSYGRGRE PGGR+ S I+G L DV+ITG NGTI
Sbjct: 99 TLSLDKDAVILGSTNPEDWPVVDPLPSYGRGRELPGGRHKSLIYGHNLTDVIITGNNGTI 158
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQG+IWWN + R+L +TRP+L+E MNS ++ISN+ F NSPFW IHPVYCS V ++ V
Sbjct: 159 DGQGSIWWNRFWNRSLDYTRPHLVELMNSTGVLISNLTFLNSPFWTIHPVYCSQVTVQNV 218
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
ILAP DSPNTDGIDPDSS NVCIED YISTGDDL+A+KSGWDEYGIAYG PS+ I I R
Sbjct: 219 RILAPHDSPNTDGIDPDSSDNVCIEDCYISTGDDLIAIKSGWDEYGIAYGRPSTNIIIHR 278
Query: 275 VTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYME 334
+ G + SGIA+GSE SGGV V AE I Y+ I +KT+ GRGG++RNI VS+V +
Sbjct: 279 LVGRTQTSGIAIGSEMSGGVSEVHAEDIQFYDSYNAIRIKTSPGRGGYVRNIYVSNVTLA 338
Query: 335 NARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICL 394
N I G G+HPDD +NPNALPV+ ITIKDV G ++ +GLI+G++ F ICL
Sbjct: 339 NVDIAITFTGLYGEHPDDAYNPNALPVIEKITIKDVVGENIKTAGLIEGIEGDNFVNICL 398
Query: 395 SNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSNHF 443
SNI L + + P CS V G + V+P C L G CS+ +
Sbjct: 399 SNIILNVTS---NYPWNCSYVKGYSDLVQPEACEPLKERIFPGHCSDCY 444
>gi|356501839|ref|XP_003519731.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 472
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 230/441 (52%), Positives = 305/441 (69%), Gaps = 5/441 (1%)
Query: 5 LVTLSILLSYFNC--FSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAI 62
LV + ++L+ F+C +++ S C+ I R +SIT+FG VGDG TLNTKAF+ AI
Sbjct: 15 LVDVFLVLALFSCSTWTVWSSSCCNQINLNEVRPHSVSITEFGAVGDGITLNTKAFQNAI 74
Query: 63 YRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSY 122
+ + GG L+VP G +LTGSF+L SH+TL+L AVI + ++ +WP++ PLPSY
Sbjct: 75 FYLNSFADKGGAKLFVPAGRWLTGSFDLISHLTLWLDNDAVILGSTNSDDWPVVDPLPSY 134
Query: 123 GRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMN 182
GRGRE PGGR+ S I+G L DVVITG NGTIDGQG+IWWN + +TL +TRP+L+E MN
Sbjct: 135 GRGRELPGGRHRSLIYGCNLTDVVITGNNGTIDGQGSIWWNNFWNKTLNYTRPHLVELMN 194
Query: 183 SRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSY 242
S ++ISNV F NSPFW IHPVYCS+V I+ VTI+AP SPNTDGI+PDSS NVCIED Y
Sbjct: 195 STGVLISNVTFLNSPFWTIHPVYCSHVTIQNVTIIAPLSSPNTDGINPDSSDNVCIEDCY 254
Query: 243 ISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHI 302
ISTGDDL+++KSGWD YGI++G PS+ I IRR+ G + +GIA+GSE SGGV V AE I
Sbjct: 255 ISTGDDLISIKSGWDGYGISFGRPSTNINIRRLIGKTTSAGIAIGSEMSGGVSEVHAEDI 314
Query: 303 NLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVV 362
+++ I +KT+ GRGG++RN+ +S++ + N I+ G G+HPDD ++P+ALPV+
Sbjct: 315 YIFDSHSAIRIKTSPGRGGYVRNVYISNMILANVDIAIRFTGLYGEHPDDTYDPDALPVI 374
Query: 363 NGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQV 422
ITIKDV G KV+ +GLIQG+K F ICLSNI L + P CS + G + V
Sbjct: 375 ERITIKDVIGVKVKHAGLIQGIKGDNFVNICLSNITLN---VSSKLPWNCSYIKGFSDLV 431
Query: 423 KPWPCSELSSSQQTGACSNHF 443
P C L CS+ +
Sbjct: 432 SPEACEPLKERIFPEHCSDCY 452
>gi|302815490|ref|XP_002989426.1| hypothetical protein SELMODRAFT_129742 [Selaginella moellendorffii]
gi|300142820|gb|EFJ09517.1| hypothetical protein SELMODRAFT_129742 [Selaginella moellendorffii]
Length = 439
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 230/437 (52%), Positives = 300/437 (68%), Gaps = 13/437 (2%)
Query: 5 LVTLSILLSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYR 64
+ LS+ +++ +C A +P+ R SI DFG +GDG TLNT AF+ A++
Sbjct: 3 FLLLSLWIAWQSCLVCA--------IPIGARPHSASIVDFGAIGDGVTLNTLAFQNAMFY 54
Query: 65 IQHLRRS--GGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSY 122
+ + + GG +LYVP G +LTGSFNLTSH TLYL +GAVI +QD WP+I PLPSY
Sbjct: 55 LSSITATDKGGAMLYVPEGRWLTGSFNLTSHFTLYLERGAVILGSQDPSQWPIIDPLPSY 114
Query: 123 GRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMN 182
GRGRE PGGR++S +HG+ L+DVVITGENGTIDGQGA WW + L TR +L+EF++
Sbjct: 115 GRGRELPGGRHISLVHGENLEDVVITGENGTIDGQGAKWWRWSKLGLLNHTRGHLVEFVS 174
Query: 183 SRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSY 242
S +IIISNV NSPFW +HPVYC+NV+I+ VTILAP DSPNTDGIDPDSSSNVCI+D Y
Sbjct: 175 STNIIISNVTLVNSPFWTLHPVYCTNVLIQGVTILAPQDSPNTDGIDPDSSSNVCIQDCY 234
Query: 243 ISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF-SGIAVGSETSGGVENVLAEH 301
IS GDD++A+KSGWDEYGIAYG PSS I IRRVTG + + IA+GSETSGG+ENVL E
Sbjct: 235 ISNGDDMIAIKSGWDEYGIAYGQPSSNIHIRRVTGQTKRGAAIAIGSETSGGIENVLVED 294
Query: 302 INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPV 361
+ + GI ++T +GRG +IRN+ +S + + + + I I+G +HPD+ FN A PV
Sbjct: 295 LVAVSTKSGISIRTGVGRGAYIRNVVLSSITLLDIQTAITISGFSSEHPDNGFNATAFPV 354
Query: 362 VNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQ 421
V +T++ V G + + G I G+ PF ICL +I L G T+ KC+DV G +
Sbjct: 355 VEKVTVRGVTGNTLDRPGRILGIPEVPFRDICLEDIALDATTGLTA--WKCTDVEGYSSS 412
Query: 422 VKPWPCSELSSSQQTGA 438
V P CS+LS + A
Sbjct: 413 VTPKICSQLSENNTPDA 429
>gi|302758838|ref|XP_002962842.1| hypothetical protein SELMODRAFT_78556 [Selaginella moellendorffii]
gi|300169703|gb|EFJ36305.1| hypothetical protein SELMODRAFT_78556 [Selaginella moellendorffii]
Length = 439
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 228/438 (52%), Positives = 300/438 (68%), Gaps = 13/438 (2%)
Query: 5 LVTLSILLSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYR 64
+ L++ +++ +C A +P+ R SI DFG +GDG TLNT AF+ A++
Sbjct: 3 FLLLALWIAWRSCLVCA--------IPIGARPHSASIVDFGAIGDGVTLNTLAFQNAMFY 54
Query: 65 IQHLRRS--GGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSY 122
+ + + GG +LYVP G +LTGSFNLTSH TLYL +GAVI +QD WP+I PLPSY
Sbjct: 55 LSSITATDKGGAMLYVPEGRWLTGSFNLTSHFTLYLERGAVILGSQDPSQWPIIDPLPSY 114
Query: 123 GRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMN 182
GRGRE PGGR++S +HG+ L+DVVITGENGTIDGQGA WW + L TR +L+EF++
Sbjct: 115 GRGRELPGGRHISLVHGENLEDVVITGENGTIDGQGAKWWRWSKLGLLNHTRGHLVEFVS 174
Query: 183 SRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSY 242
S +IIISNV NSPFW +HPVYC+NV+I+ VTILAP DSPNTDGIDPDSSSNVCI+D Y
Sbjct: 175 STNIIISNVTLVNSPFWTLHPVYCTNVLIQGVTILAPQDSPNTDGIDPDSSSNVCIQDCY 234
Query: 243 ISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF-SGIAVGSETSGGVENVLAEH 301
IS GDD++A+KSGWDEYGIAYG PSS I IRRVTG + + IA+GSETSGG+ENVL E
Sbjct: 235 ISNGDDMIAIKSGWDEYGIAYGQPSSNIHIRRVTGQTKRGAAIAIGSETSGGIENVLVED 294
Query: 302 INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPV 361
+ + G+ ++T +GRG +IRN+ +S + + + + I I+G +HPD+ +N A PV
Sbjct: 295 LVAVSTKSGVSIRTGVGRGAYIRNVVLSSITLLDIQTAITISGFSSEHPDNGYNATAFPV 354
Query: 362 VNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQ 421
V +T++ V G + + G I G+ PF ICL +I L G T+ KC+DV G +
Sbjct: 355 VEKVTVRGVTGNTLDRPGRILGIPEVPFRDICLEDIALDASTGLTA--WKCTDVEGYSSS 412
Query: 422 VKPWPCSELSSSQQTGAC 439
V P C ELS + AC
Sbjct: 413 VTPKICKELSENNSPDAC 430
>gi|224130826|ref|XP_002320934.1| predicted protein [Populus trichocarpa]
gi|222861707|gb|EEE99249.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 216/403 (53%), Positives = 284/403 (70%), Gaps = 3/403 (0%)
Query: 31 PMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNL 90
P R ++IT+FG VGDG TLNTKAF+ AI+ + GG L+VP G +LTGSF+L
Sbjct: 28 PAVIRPHSVAITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDL 87
Query: 91 TSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGE 150
SH+TL+L K A+I + ++ +WP+I LPSYGRGRE PG R+ S I+G L DV+ITG+
Sbjct: 88 ISHLTLWLDKDAIILGSTNSDDWPVIDSLPSYGRGRELPGRRHKSLIYGRNLTDVIITGD 147
Query: 151 NGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVV 210
NGTIDGQG+IWWN +R TL +TRP+L+E MN+ ++ISN+ F NSPFW IHPVYCS V+
Sbjct: 148 NGTIDGQGSIWWNWFRNETLDYTRPHLVELMNTTGVVISNLTFLNSPFWTIHPVYCSQVI 207
Query: 211 IRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGI 270
++ VTILAP DSPNTDGIDPDSS +VCIED YISTGDD++A+KSGWDEYG +Y PS I
Sbjct: 208 VQNVTILAPLDSPNTDGIDPDSSDDVCIEDCYISTGDDIIAIKSGWDEYGTSYARPSKNI 267
Query: 271 TIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSD 330
TIR + G + +GIA+GSE SGGV V AE++ YN GI +KT GRGG++RNI +S+
Sbjct: 268 TIRGLVGQTTSAGIAIGSEMSGGVSEVHAENLTFYNSTTGIRIKTAPGRGGYVRNIYISN 327
Query: 331 VYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT 390
+ + + + I+ G GDHPD+ ++P ALP++ ITI DV G V+ +GL++GL+ F
Sbjct: 328 MSLTDVKTAIRFTGQYGDHPDESYDPKALPLIERITIDDVTGQNVKYAGLLEGLEGDTFL 387
Query: 391 GICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSS 433
ICLSNINL + P CS + G + V P C L +
Sbjct: 388 DICLSNINLSVTS---KSPWNCSYIQGYSEAVSPEICEPLRET 427
>gi|224064770|ref|XP_002301554.1| predicted protein [Populus trichocarpa]
gi|222843280|gb|EEE80827.1| predicted protein [Populus trichocarpa]
Length = 458
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 213/396 (53%), Positives = 288/396 (72%), Gaps = 3/396 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R ++IT+FG VGDG TLNTKAF+ AI+ + GG L+VP G +LTGSF+L SH+
Sbjct: 39 RPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPTGRWLTGSFDLISHL 98
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL+L K AVI + ++ +WP+I PLPSYGRGRE PG R+ S I+G L DV+ITG+NGTI
Sbjct: 99 TLWLDKDAVILGSTNSDDWPVIDPLPSYGRGRELPGRRHKSLIYGRNLTDVIITGDNGTI 158
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQG+IWW+ +R +TL +TRP+L+EFMN+ ++ISN+ F NSPFW IHPVYCS V+++ V
Sbjct: 159 DGQGSIWWDWFRNQTLNYTRPHLVEFMNTTGVVISNLTFINSPFWTIHPVYCSQVIVQNV 218
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
TILAP DSPNTDGIDPDSS +VC+ED Y+STGDD++A+KSGWDEYG++YG PS ITIRR
Sbjct: 219 TILAPLDSPNTDGIDPDSSDDVCVEDCYVSTGDDIIAIKSGWDEYGMSYGRPSKNITIRR 278
Query: 275 VTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYME 334
+ G + +GIA+GSE SGGV V AE++ YN GI +KT+ GRGG++RNI +S++ +
Sbjct: 279 LVGQTTSAGIAIGSEMSGGVSEVHAENLRFYNSTTGIRIKTSPGRGGYVRNIYISNMSLT 338
Query: 335 NARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICL 394
+ + I G G+HPD+ ++P ALP++ IT++DV G V+ +GL++G++ F ICL
Sbjct: 339 DVKTAISFTGRYGEHPDEYYDPTALPLIERITVEDVAGQNVKYAGLLEGIEGDTFLDICL 398
Query: 395 SNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 430
NINL + P CS + G + V P C L
Sbjct: 399 LNINLSVTS---KSPWNCSYIQGYSDTVSPEICEPL 431
>gi|356533489|ref|XP_003535296.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 472
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 229/441 (51%), Positives = 302/441 (68%), Gaps = 5/441 (1%)
Query: 5 LVTLSILLSYFNC--FSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAI 62
LV ++L+ F+C +++ S C+ I R +SIT+FG VGDG TLNT AF+ AI
Sbjct: 15 LVDGFLVLALFSCSTWTVWSSSCCNQINSYEVRPHSVSITEFGAVGDGITLNTIAFQNAI 74
Query: 63 YRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSY 122
+ + GG L+VP G +LTGSF+L SH+TL+L AVI + ++ +WP++ PLPSY
Sbjct: 75 FYLNSFADKGGAKLFVPAGRWLTGSFDLISHLTLWLDNDAVILGSMNSDDWPVVDPLPSY 134
Query: 123 GRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMN 182
G GRE PGGR+ S I+G L DVVITG NGTIDGQG+IWWN + +TL +TRP+L+E MN
Sbjct: 135 GHGRELPGGRHRSLIYGRNLTDVVITGNNGTIDGQGSIWWNNFWNKTLNYTRPHLVELMN 194
Query: 183 SRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSY 242
S ++ISNV F NSPFW IHPVYCS+V I+ VTI+AP SPNTDGI+PDSS NVCIED Y
Sbjct: 195 STGVLISNVTFMNSPFWTIHPVYCSHVTIQNVTIIAPLSSPNTDGINPDSSDNVCIEDCY 254
Query: 243 ISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHI 302
ISTGDDL+++KSGWD YGI++G PS+ I IRR+ G + +GIA+GSE SGGV V AE I
Sbjct: 255 ISTGDDLISIKSGWDGYGISFGRPSTNINIRRLIGKTTSAGIAIGSEMSGGVSEVHAEDI 314
Query: 303 NLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVV 362
+++ I +KT+ GRGG++RN+ +S++ + N I+ G G+HPDD ++P+ALPV+
Sbjct: 315 YIFDSHSAIRIKTSPGRGGYVRNVYISNMILVNVDIAIRFTGLYGEHPDDTYDPDALPVI 374
Query: 363 NGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQV 422
ITIKDV G KV+++GLIQG+K F ICLSNI L P CS V G + V
Sbjct: 375 ERITIKDVIGEKVKRAGLIQGIKGDNFVNICLSNITLN---VSKKLPWNCSYVKGYSDLV 431
Query: 423 KPWPCSELSSSQQTGACSNHF 443
P C L CS+ +
Sbjct: 432 SPEACEPLRERIFPEHCSDCY 452
>gi|359480238|ref|XP_002273855.2| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
gi|297744085|emb|CBI37055.3| unnamed protein product [Vitis vinifera]
Length = 466
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 220/407 (54%), Positives = 294/407 (72%), Gaps = 8/407 (1%)
Query: 25 TCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYL 84
T SG++ R ++IT+FG VGDG TLNTKAF+ AI+ + GG L+VP G +L
Sbjct: 33 TSSGVI----RPHSVAITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWL 88
Query: 85 TGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQD 144
TGSF+L SH+TL+L K AVI + ++ +WP+I PLPSYGRGRE PG R+ S I+G L D
Sbjct: 89 TGSFDLISHLTLWLDKDAVILGSMNSNDWPVIDPLPSYGRGRELPGRRHRSLIYGCNLTD 148
Query: 145 VVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPV 204
V++TG+NGTIDGQG+IWWN ++++TL +TRP+L+EF+NS ++ISNV F NSPFW IHPV
Sbjct: 149 VIVTGDNGTIDGQGSIWWNWFQKKTLNYTRPHLVEFINSTGVVISNVTFLNSPFWTIHPV 208
Query: 205 YCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYG 264
YCS V+I+ VTILAP DSPNTDGIDPDSS++VCIED YISTGDDL+A+KSGWDEYGI+Y
Sbjct: 209 YCSQVIIQNVTILAPLDSPNTDGIDPDSSNDVCIEDCYISTGDDLIAIKSGWDEYGISYA 268
Query: 265 HPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFI 323
PS+ I IRR+ G + S GIA+GSE SGGV V AE + +N GI +KT+ GRGG++
Sbjct: 269 RPSTNIIIRRLVGKTNSSAGIAIGSEMSGGVSEVHAESLQFFNSKTGIRIKTSPGRGGYV 328
Query: 324 RNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQG 383
RNI +SD+ + + + I+ G G+HPD+ ++P ALP++ IT+KDV G ++ +GL++G
Sbjct: 329 RNIYISDMNLVDVKIAIRFTGQYGEHPDEFYDPTALPIIENITVKDVMGENIKFAGLLEG 388
Query: 384 LKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 430
++ F ICLSNI L + P CS + G + V P C L
Sbjct: 389 IEGDNFVNICLSNITLNVTS---ESPWNCSYIHGYSDLVSPEACEPL 432
>gi|222636745|gb|EEE66877.1| hypothetical protein OsJ_23693 [Oryza sativa Japonica Group]
Length = 506
Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust.
Identities = 224/443 (50%), Positives = 300/443 (67%), Gaps = 9/443 (2%)
Query: 1 MFRFLVTLSILLSYFNCFSL-----ASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNT 55
M R L +LL + F+ +S + C+ + +R +SIT+FG V DG TLNT
Sbjct: 30 MSRSASALQVLLVFATVFAATQWATSSAMYCNDLTASVHRPHSVSITEFGAVNDGVTLNT 89
Query: 56 KAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPL 115
KAF+ AI+ + GG L+VP G +LTGSFNL SH+T+ L AVI +QD+ +WP+
Sbjct: 90 KAFKNAIFYLSSFADKGGAELFVPAGRWLTGSFNLISHLTVSLDADAVIIGSQDSSDWPV 149
Query: 116 IAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRP 175
I PLPSYGRGRE PG R+ S I G L DV+ITG NGTIDGQG +WWN + TL +TRP
Sbjct: 150 IDPLPSYGRGRELPGKRHQSLIFGSNLTDVIITGANGTIDGQGELWWNWFHNHTLNYTRP 209
Query: 176 NLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSN 235
L+E M S ++ISN+ F N+PFWNIHPVYCS V+++++TILAP SPNTDGIDPDSSSN
Sbjct: 210 PLLELMYSDRVVISNLTFMNAPFWNIHPVYCSQVLVQHLTILAPISSPNTDGIDPDSSSN 269
Query: 236 VCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGV 294
VCIED YI GDD+V +KSGWDEYGI++ HPSS I+IR +TG + S GIA GSE SGG+
Sbjct: 270 VCIEDCYIRNGDDIVVIKSGWDEYGISFAHPSSNISIRNITGQTRNSAGIAFGSEMSGGI 329
Query: 295 ENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKF 354
+V AE + N GI +KT GRGG+++NI ++DV M+N I+I G+ G+HPDD +
Sbjct: 330 SDVRAEGLRFINSVHGIRIKTAPGRGGYVKNIYIADVSMDNVSIAIRITGNYGEHPDDNY 389
Query: 355 NPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSD 414
+ NALPV++ ITIK+V G + +G++ G++ F+ ICLSN++L + ++ P CS
Sbjct: 390 DKNALPVISNITIKNVVGVNIGTAGMLLGIQGDIFSNICLSNVSL---SSKSADPWNCSL 446
Query: 415 VSGSAYQVKPWPCSELSSSQQTG 437
+ G + V P C +L S G
Sbjct: 447 IEGFSNSVAPEICEQLRPSPGPG 469
>gi|218199365|gb|EEC81792.1| hypothetical protein OsI_25505 [Oryza sativa Indica Group]
Length = 506
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 224/443 (50%), Positives = 299/443 (67%), Gaps = 9/443 (2%)
Query: 1 MFRFLVTLSILLSYFNCFSL-----ASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNT 55
M R L +LL + F+ +S + C+ + +R +SIT+FG V DG TLNT
Sbjct: 30 MSRSASALQVLLVFATVFAATQWATSSAMYCNDLTASVHRPHSVSITEFGAVNDGVTLNT 89
Query: 56 KAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPL 115
KAF+ AI+ + GG L+VP G +LTGSFNL SH+T+ L AVI +QD+ +WP+
Sbjct: 90 KAFKNAIFYLSSFADKGGAELFVPAGRWLTGSFNLISHLTVSLDADAVIIGSQDSSDWPV 149
Query: 116 IAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRP 175
I PLPSYGRGRE PG R+ S I G L DV+ITG NGTIDGQG +WWN + TL +TRP
Sbjct: 150 IDPLPSYGRGRELPGKRHQSLIFGSNLTDVIITGANGTIDGQGELWWNWFHNHTLNYTRP 209
Query: 176 NLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSN 235
L+E M S ++ISN+ F N+PFWNIHPVYCS V+++++TILAP SPNTDGIDPDSSSN
Sbjct: 210 PLLELMYSDRVVISNLTFMNAPFWNIHPVYCSQVLVQHLTILAPISSPNTDGIDPDSSSN 269
Query: 236 VCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGV 294
VCIED YI GDD+V +KSGWDEYGI++ HPSS I+IR +TG + S GIA GSE SGG+
Sbjct: 270 VCIEDCYIRNGDDIVVIKSGWDEYGISFAHPSSNISIRNITGQTRNSAGIAFGSEMSGGI 329
Query: 295 ENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKF 354
+V AE + N GI +KT GRGG+++NI ++DV M+N I+I G+ G+HPDD +
Sbjct: 330 SDVRAEGLRFINSVHGIRIKTAPGRGGYVKNIYIADVSMDNVSIAIRITGNYGEHPDDNY 389
Query: 355 NPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSD 414
+ N LPV++ ITIK+V G + +G++ G++ F+ ICLSN++L + ++ P CS
Sbjct: 390 DKNVLPVISNITIKNVVGVNIGTAGMLLGIQGDIFSNICLSNVSL---SSKSADPWNCSL 446
Query: 415 VSGSAYQVKPWPCSELSSSQQTG 437
V G + V P C +L S G
Sbjct: 447 VKGFSNSVAPEICEQLRPSPGPG 469
>gi|357111082|ref|XP_003557344.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 479
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 220/431 (51%), Positives = 298/431 (69%), Gaps = 5/431 (1%)
Query: 1 MFRFLVTLSILLSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFRE 60
+F+ L+ + + + +S S + C + YR +SIT+FG VGDG T NTKAF+
Sbjct: 7 IFQALLVFTTVAAEIQ-WSSVSGMYCKDLTASVYRPHSVSITEFGAVGDGMTRNTKAFQN 65
Query: 61 AIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLP 120
AI+ + GG L+VP G +LTGSF+L SH+T+ L K AVI + D+ +WP+I PLP
Sbjct: 66 AIFYLSSFANKGGAQLFVPAGRWLTGSFSLVSHLTVSLDKDAVILGSPDSSDWPVIDPLP 125
Query: 121 SYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEF 180
SYGRGRE PG R+ S I G L DV+ITG NGTIDGQG IWWN + TL +TRP L+EF
Sbjct: 126 SYGRGRELPGKRHQSLIFGSNLTDVIITGANGTIDGQGEIWWNWFHNHTLNYTRPPLVEF 185
Query: 181 MNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIED 240
M S +++SN+ F NSPFWNIHPVYCS V+++++TILAP SPNTDGIDPDSS+NVCIED
Sbjct: 186 MYSTRVVVSNLTFTNSPFWNIHPVYCSQVLVQHLTILAPISSPNTDGIDPDSSTNVCIED 245
Query: 241 SYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLA 299
YI GDD+V +KSGWDEYGI++ +PSS I+I+ +TG + S GIA+GSE SGG+ NV A
Sbjct: 246 CYIRNGDDIVVIKSGWDEYGISFAYPSSNISIQNITGQTRSSAGIALGSEMSGGISNVRA 305
Query: 300 EHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNAL 359
I + N GI +KT GRGG+++N+ ++DV M+N I+I + G+HPDDK++ NAL
Sbjct: 306 VGIRIVNSVHGIRIKTAPGRGGYVKNVYIADVSMDNVSIAIRITANYGEHPDDKYDKNAL 365
Query: 360 PVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSA 419
P+++ ITIK+V G + +G++QG++ F+ ICLSN+ L + + P CS V G +
Sbjct: 366 PIISNITIKNVIGANIGVAGMLQGIQGDSFSNICLSNVTL---STKSMDPWNCSLVEGYS 422
Query: 420 YQVKPWPCSEL 430
V P C EL
Sbjct: 423 NSVSPEICEEL 433
>gi|297817560|ref|XP_002876663.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297322501|gb|EFH52922.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 471
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 221/439 (50%), Positives = 302/439 (68%), Gaps = 6/439 (1%)
Query: 1 MFRFLVTLSILL--SYFNCF-SLASVVTCS-GIVPMRYRNDKISITDFGGVGDGKTLNTK 56
M R + L +LL S++ + S+ + C + +R +SIT+FG VGDG TLNTK
Sbjct: 1 MKRSFLLLYVLLVQSFYGAWCSVGGSLHCEYSSLASLHRPHSVSITEFGAVGDGVTLNTK 60
Query: 57 AFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLI 116
AF+ A++ + GG L+VP G +LTGSF+L SH+TL+L KGA I + + NWP++
Sbjct: 61 AFQNALFYLNSFSDKGGAKLFVPAGQWLTGSFDLISHLTLWLDKGATILGSTSSENWPVV 120
Query: 117 APLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPN 176
PLPSYGRGRE PG R+ S I+G L DVVITGENGTIDGQG++WW+ +R L +TRP+
Sbjct: 121 DPLPSYGRGRELPGRRHRSLIYGQNLTDVVITGENGTIDGQGSVWWDWFRNGELNYTRPH 180
Query: 177 LIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNV 236
L+E MNS +IISN+ F NSPFWNIHPVYC +VV++ +TILAP +SPNTDG+DPDSS+NV
Sbjct: 181 LVELMNSTGLIISNLTFLNSPFWNIHPVYCRDVVVKNLTILAPLESPNTDGVDPDSSTNV 240
Query: 237 CIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTG-SSPFSGIAVGSETSGGVE 295
CIED YI TGDDLV++KSGWDEYGI+Y PSS I I R+TG ++ SGIA+GSE SGGV
Sbjct: 241 CIEDCYIVTGDDLVSIKSGWDEYGISYARPSSKIKINRLTGQTTSSSGIAIGSEMSGGVS 300
Query: 296 NVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFN 355
+ + ++L+N GI +KT+ GRGG++RN+ + +V ++N +K I+ G G+HPD+KF+
Sbjct: 301 EIYIKDLHLFNSNTGIRIKTSPGRGGYVRNVHILNVKLDNVKKAIRFTGKYGEHPDEKFD 360
Query: 356 PNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDV 415
P ALP + IT ++V G + +GL++G+ F IC N+ L+ P +CS+V
Sbjct: 361 PKALPAIEKITFENVNGDGIGVAGLLEGIAGDEFKNICFLNVTLRVKKNSKKSPWECSNV 420
Query: 416 SGSAYQVKPW-PCSELSSS 433
G + V P C L S
Sbjct: 421 RGYSQWVSPEITCDSLKES 439
>gi|18412253|ref|NP_567126.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|11762132|gb|AAG40344.1|AF324992_1 AT3g62110 [Arabidopsis thaliana]
gi|23397166|gb|AAN31866.1| unknown protein [Arabidopsis thaliana]
gi|332646790|gb|AEE80311.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 471
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 212/402 (52%), Positives = 286/402 (71%), Gaps = 2/402 (0%)
Query: 34 YRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSH 93
+R +SIT+FG VGDG TLNTKAF+ A++ + GG L+VP G +LTGSF+L SH
Sbjct: 38 HRPHSVSITEFGAVGDGVTLNTKAFQNALFYLNSFSDKGGAKLFVPAGQWLTGSFDLISH 97
Query: 94 MTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGT 153
+TL+L KGA I + + NWP++ PLPSYGRGRE PG R+ S I+G L DVVITGENGT
Sbjct: 98 LTLWLDKGATILGSTSSENWPVVDPLPSYGRGRELPGRRHRSLIYGQNLTDVVITGENGT 157
Query: 154 IDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRY 213
IDGQG +WW+ +R L +TRP+L+E MNS +IISN+ F NSPFWNIHPVYC +VV++
Sbjct: 158 IDGQGTVWWDWFRNGELNYTRPHLVELMNSTGLIISNLTFLNSPFWNIHPVYCRDVVVKN 217
Query: 214 VTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIR 273
+TILAP +SPNTDG+DPDSS+NVCIED YI TGDDLV++KSGWDEYGI+Y PSS I I
Sbjct: 218 LTILAPLESPNTDGVDPDSSTNVCIEDCYIVTGDDLVSIKSGWDEYGISYARPSSKIKIN 277
Query: 274 RVTG-SSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVY 332
R+TG ++ SGIA+GSE SGGV + + ++L+N GI +KT+ GRGG++RN+ + +V
Sbjct: 278 RLTGQTTSSSGIAIGSEMSGGVSEIYIKDLHLFNSNTGIRIKTSAGRGGYVRNVHILNVK 337
Query: 333 MENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGI 392
++N +K I+ G G+HPD+K++P ALP + IT ++V G + +GL++G++ F I
Sbjct: 338 LDNVKKAIRFTGKYGEHPDEKYDPKALPAIEKITFENVNGDGIGVAGLLEGIEGDVFKNI 397
Query: 393 CLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPW-PCSELSSS 433
C N+ L+ P +CS+V G + V P C L S
Sbjct: 398 CFLNVTLRVKKNSKKSPWECSNVRGYSQWVSPEITCDSLKES 439
>gi|302767254|ref|XP_002967047.1| hypothetical protein SELMODRAFT_408393 [Selaginella moellendorffii]
gi|300165038|gb|EFJ31646.1| hypothetical protein SELMODRAFT_408393 [Selaginella moellendorffii]
Length = 478
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/411 (53%), Positives = 287/411 (69%), Gaps = 5/411 (1%)
Query: 26 CSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLT 85
C + R +SITDFG VGDG+ +NT AF+ AI+ ++ GG LYVP G +LT
Sbjct: 49 CCSPRSLPKRPHSVSITDFGAVGDGRIVNTLAFQNAIFYLKSFADKGGAQLYVPRGRWLT 108
Query: 86 GSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDV 145
GSFNLTSH+TL+L +GAVI +QD WP+I LPSYGRGRE PGGR++S IHG + DV
Sbjct: 109 GSFNLTSHLTLFLEEGAVILGSQDLLEWPVIPALPSYGRGRELPGGRHISLIHGKNMVDV 168
Query: 146 VITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVY 205
VITG NGTIDGQG++WW+ + +TL FTR +L+E ++SR I ISNV F+NSPFW IHPVY
Sbjct: 169 VITGANGTIDGQGSVWWDWFHNKTLDFTRGHLVELIDSRHITISNVTFKNSPFWTIHPVY 228
Query: 206 CSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH 265
CS+V+I+ VTILAP +PN DGIDPDSSSNVCI D YISTGDDL+++KSGWDE+GI YG
Sbjct: 229 CSDVLIQDVTILAPPYAPNIDGIDPDSSSNVCIRDCYISTGDDLISIKSGWDEHGINYGM 288
Query: 266 PSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 324
PS+ + I V+G SP S GIA GSE SGG+ +V + + + N GI +KT GRGG+I
Sbjct: 289 PSTNVCIHNVSGQSPTSAGIAFGSEMSGGISDVFIKSVRVANSRSGIRIKTGAGRGGYIT 348
Query: 325 NITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGL 384
NI++SD+ +EN G HPDD ++P ALPV+ GI+I+DV G ++ +G + GL
Sbjct: 349 NISISDLQLENVSVAFDFTALYGGHPDDGYDPRALPVIRGISIRDVVGHEIGWAGCMAGL 408
Query: 385 KNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQ 435
+ +PF +C +N++L AG CS+ G + +V P PC EL QQ
Sbjct: 409 EEAPFRDLCFANVSLSVGAG----AWNCSNTYGFSERVVPSPCLELDRKQQ 455
>gi|255571381|ref|XP_002526639.1| polygalacturonase, putative [Ricinus communis]
gi|223534031|gb|EEF35751.1| polygalacturonase, putative [Ricinus communis]
Length = 480
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 221/402 (54%), Positives = 301/402 (74%), Gaps = 3/402 (0%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
SI DFGGVGDGKT NT+ FR+A+ +Q GG+ L VP G +LTGSFNLTS+ TL+L
Sbjct: 79 SIVDFGGVGDGKTSNTETFRKAVRYMQRFAEKGGSQLIVPRGRWLTGSFNLTSNFTLFLE 138
Query: 100 KGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGA 159
+GAVI +QD WP+I PLPSYGRGRER GGR++S IHG+GL +V+ITG NG+IDGQG
Sbjct: 139 EGAVILGSQDPKEWPIIEPLPSYGRGRERLGGRHISLIHGNGLTNVIITGNNGSIDGQGK 198
Query: 160 IWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP 219
+WW +W RTL TR +L+E MNS +I+ISN+ F+NSPFW IHPVYCSNVV++ +TILAP
Sbjct: 199 MWWELWWNRTLEHTRGHLVELMNSHNILISNLTFRNSPFWTIHPVYCSNVVVKDMTILAP 258
Query: 220 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS 279
++PNTDGIDPDSS+NVCIED YI +GDDLVAVKSGWD+YGI PSS I +RRV+G++
Sbjct: 259 LNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIKTARPSSHIIVRRVSGTT 318
Query: 280 P-FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK 338
P SG+ +GSE SGG+ NV+ + +++++ G+ +KT+IGRGG+I NIT+ ++ ME +
Sbjct: 319 PTCSGVGIGSEMSGGIFNVMIQDLHIWDSAAGVRIKTDIGRGGYISNITLHNITMERVKI 378
Query: 339 GIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNIN 398
I+ + DHPD++++PNA+PVV G++I +V ++ ++QG+K++PF GIC+ N+
Sbjct: 379 PIRFSRGSNDHPDERWDPNAIPVVKGVSISNVICVNSTKAPVLQGIKDAPFGGICMKNVT 438
Query: 399 LQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACS 440
L G+A TS C VSG A +V P PC +L ++ + CS
Sbjct: 439 LVGLASSTS--WHCEFVSGFANEVFPMPCPQLQNNDSSSWCS 478
>gi|308080756|ref|NP_001183080.1| uncharacterized protein LOC100501436 precursor [Zea mays]
gi|238009236|gb|ACR35653.1| unknown [Zea mays]
gi|414884141|tpg|DAA60155.1| TPA: hypothetical protein ZEAMMB73_186239 [Zea mays]
Length = 490
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/436 (49%), Positives = 300/436 (68%), Gaps = 4/436 (0%)
Query: 4 FLVTLSILLSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIY 63
LV+ +I+++ S + C + R + S+TDFG VGDG TLNTKAF+ A++
Sbjct: 18 LLVSATIVVAQTQWASGVWGMYCEDLTASVERPHRASVTDFGAVGDGATLNTKAFQNALF 77
Query: 64 RIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYG 123
+ + GG L+VP G +LTGSF+L SH+TL L K AVI + D+ +WP+I LPSYG
Sbjct: 78 HLDSFAKKGGAQLFVPAGRWLTGSFSLISHLTLSLDKDAVILGSPDSSDWPVIDALPSYG 137
Query: 124 RGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNS 183
RGRE PG R+ S I G L DV+ITG NGT+DGQGA+WW+ + TL +TRP L+E M S
Sbjct: 138 RGRELPGKRHQSLIFGSNLTDVIITGANGTVDGQGAVWWDWFHNHTLNYTRPPLVELMYS 197
Query: 184 RSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYI 243
++ISN+ F NSPFWNIHPVYCS V+++++TILAP SPNTDGIDPDSS+NVCIED Y+
Sbjct: 198 TRVVISNLTFINSPFWNIHPVYCSQVLVQHLTILAPISSPNTDGIDPDSSTNVCIEDCYV 257
Query: 244 STGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHI 302
GDD++ +KSGWDEYGI++ HPSS I+IR +TG + S G+A GSE SGG+ +V AE +
Sbjct: 258 RNGDDIIVIKSGWDEYGISFAHPSSNISIRNITGQTRNSAGLAFGSEMSGGISDVRAEGV 317
Query: 303 NLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVV 362
+ N GI +KT GRGG+++N+ V+DV +N I+I G+ G+HPDD ++ NALP +
Sbjct: 318 RIVNSVHGIRIKTAPGRGGYVKNVYVADVSFDNVSIAIRITGNYGEHPDDGYDRNALPTI 377
Query: 363 NGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQV 422
+ ITIKDV G + +G++QG+ F+GICLSN++L + ++ P CS V G + V
Sbjct: 378 SNITIKDVVGVNIGVAGMLQGIPGDSFSGICLSNVSL---SVRSTDPWNCSLVEGYSSSV 434
Query: 423 KPWPCSELSSSQQTGA 438
P C +L ++ G+
Sbjct: 435 SPEVCEQLRATPGPGS 450
>gi|242043478|ref|XP_002459610.1| hypothetical protein SORBIDRAFT_02g007470 [Sorghum bicolor]
gi|241922987|gb|EER96131.1| hypothetical protein SORBIDRAFT_02g007470 [Sorghum bicolor]
Length = 499
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 217/409 (53%), Positives = 286/409 (69%), Gaps = 4/409 (0%)
Query: 26 CSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLT 85
C + R SITDFG VGDG TLNTKAF+ A++ + + GG L+VP G +LT
Sbjct: 47 CEDLTASVERPHSASITDFGAVGDGATLNTKAFQNALFYLNSFAKKGGAQLFVPAGRWLT 106
Query: 86 GSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDV 145
GSF+L SH+TL L K AVI + D+ +WP+I LPSYGRGRE PG R+ S I G L DV
Sbjct: 107 GSFSLISHLTLSLDKDAVILGSTDSSDWPVIDALPSYGRGRELPGKRHQSLIFGSNLTDV 166
Query: 146 VITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVY 205
+ITG NGTIDGQGA+WW+ + TL +TRP L+E M S ++ISN+ F NSPFWNIHPVY
Sbjct: 167 IITGSNGTIDGQGAVWWDWFHNHTLNYTRPPLVELMYSTRVVISNLTFINSPFWNIHPVY 226
Query: 206 CSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH 265
CS V+ +++TILAP SPNTDGIDPDSS+NVCIED YI GDD+V +KSGWDEYGI++ H
Sbjct: 227 CSQVLAQHLTILAPISSPNTDGIDPDSSTNVCIEDCYIRNGDDIVVIKSGWDEYGISFAH 286
Query: 266 PSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 324
PSS I+IR +TG + S G+A GSE SGG+ +V AE I + N GI +KT GRGG+++
Sbjct: 287 PSSNISIRNITGQTRNSAGLAFGSEMSGGISDVRAEGIRIVNSVHGIRIKTAPGRGGYVK 346
Query: 325 NITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGL 384
N+ V+DV +N I+I G+ G+HPDD++N +ALP ++ ITIKDV G + +G++QG+
Sbjct: 347 NVYVADVSFDNVSIAIRITGNYGEHPDDRYNKSALPTISNITIKDVVGVNIGVAGMLQGI 406
Query: 385 KNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSS 433
F+ ICLSN++L + ++ P CS V G + V P C +L +S
Sbjct: 407 PGDNFSNICLSNVSL---SVRSTDPWNCSLVEGYSNSVSPEVCEQLRTS 452
>gi|302755072|ref|XP_002960960.1| hypothetical protein SELMODRAFT_33152 [Selaginella moellendorffii]
gi|300171899|gb|EFJ38499.1| hypothetical protein SELMODRAFT_33152 [Selaginella moellendorffii]
Length = 393
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 217/397 (54%), Positives = 283/397 (71%), Gaps = 5/397 (1%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R +SITDFG VGDG+ +NT AF+ AI+ ++ GG LYVP G +LTGSFNLTSH+
Sbjct: 1 RPHSVSITDFGAVGDGRIVNTLAFQNAIFYLKSFADKGGAQLYVPRGRWLTGSFNLTSHL 60
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL+L +GAVI +QD WP+I LPSYGRGRE PGGR++S IHG + DVVITG NGTI
Sbjct: 61 TLFLEEGAVILGSQDLLEWPVIPALPSYGRGRELPGGRHISLIHGKNMVDVVITGANGTI 120
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQG++WW+ + +TL FTR +L+E ++SR I ISNV F+NSPFW IHPVYCS+V+I+ V
Sbjct: 121 DGQGSVWWDWFHNKTLDFTRGHLVELIDSRHITISNVTFKNSPFWTIHPVYCSDVLIQDV 180
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
TILAP +PN DGIDPDSSSNVCI D YISTGDDL+++KSGWDE+GI YG PS+ + I
Sbjct: 181 TILAPPYAPNIDGIDPDSSSNVCIRDCYISTGDDLISIKSGWDEHGINYGMPSTNVCIHN 240
Query: 275 VTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
V+G SP S GIA GSE SGG+ +V + + + N GI +KT GRGG+I NI++SD+ +
Sbjct: 241 VSGQSPTSAGIAFGSEMSGGISDVFIKSVRVANSRSGIRIKTGAGRGGYITNISISDLQL 300
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
EN G HPDD ++P ALPV+ GI+I+DV G ++ +G + GL+ +PF +C
Sbjct: 301 ENVSVAFDFTALYGGHPDDGYDPRALPVIRGISIRDVVGHEIGWAGCMAGLEEAPFRDLC 360
Query: 394 LSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 430
+N++L AG CS+ G + +V P PC EL
Sbjct: 361 FANVSLSVGAG----AWNCSNTYGFSERVVPSPCLEL 393
>gi|6899921|emb|CAB71871.1| putative protein [Arabidopsis thaliana]
Length = 470
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 212/402 (52%), Positives = 285/402 (70%), Gaps = 3/402 (0%)
Query: 34 YRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSH 93
+R +SIT+FG VGDG TLNTKAF+ A++ + GG L+VP G +LTGSF+L SH
Sbjct: 38 HRPHSVSITEFGAVGDGVTLNTKAFQNALFYLNSFSDKGGAKLFVPAGQWLTGSFDLISH 97
Query: 94 MTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGT 153
+TL+L KGA I + NWP++ PLPSYGRGRE PG R+ S I+G L DVVITGENGT
Sbjct: 98 LTLWLDKGATILGSTAK-NWPVVDPLPSYGRGRELPGRRHRSLIYGQNLTDVVITGENGT 156
Query: 154 IDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRY 213
IDGQG +WW+ +R L +TRP+L+E MNS +IISN+ F NSPFWNIHPVYC +VV++
Sbjct: 157 IDGQGTVWWDWFRNGELNYTRPHLVELMNSTGLIISNLTFLNSPFWNIHPVYCRDVVVKN 216
Query: 214 VTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIR 273
+TILAP +SPNTDG+DPDSS+NVCIED YI TGDDLV++KSGWDEYGI+Y PSS I I
Sbjct: 217 LTILAPLESPNTDGVDPDSSTNVCIEDCYIVTGDDLVSIKSGWDEYGISYARPSSKIKIN 276
Query: 274 RVTG-SSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVY 332
R+TG ++ SGIA+GSE SGGV + + ++L+N GI +KT+ GRGG++RN+ + +V
Sbjct: 277 RLTGQTTSSSGIAIGSEMSGGVSEIYIKDLHLFNSNTGIRIKTSAGRGGYVRNVHILNVK 336
Query: 333 MENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGI 392
++N +K I+ G G+HPD+K++P ALP + IT ++V G + +GL++G++ F I
Sbjct: 337 LDNVKKAIRFTGKYGEHPDEKYDPKALPAIEKITFENVNGDGIGVAGLLEGIEGDVFKNI 396
Query: 393 CLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPW-PCSELSSS 433
C N+ L+ P +CS+V G + V P C L S
Sbjct: 397 CFLNVTLRVKKNSKKSPWECSNVRGYSQWVSPEITCDSLKES 438
>gi|148909907|gb|ABR18040.1| unknown [Picea sitchensis]
Length = 472
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/404 (53%), Positives = 278/404 (68%), Gaps = 1/404 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R +SI +FGGVGDG T+NT+AFR+AI + +GG LY+PPG +LTGSFNLT H
Sbjct: 42 RAQSVSIAEFGGVGDGTTVNTEAFRKAIEHLSEFSETGGGQLYIPPGRWLTGSFNLTDHF 101
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TLYL K AVI +QD +WPLI PLPSYG GR+ PG RY S I+G L DVVITG+NGTI
Sbjct: 102 TLYLHKEAVILGSQDLEDWPLIPPLPSYGMGRDAPGPRYSSLINGYNLTDVVITGDNGTI 161
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQGAIWW + ++ L TR L+E M S+ IIISN+ F NSP WN+HPVY SN++I+YV
Sbjct: 162 DGQGAIWWQKFHKKILKNTRGYLVELMYSKDIIISNLTFLNSPAWNLHPVYSSNILIQYV 221
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
TILAP DSPNTDGIDPDS S V IED Y+ +GDD+VA+KSGWDEYGI++G PS I IRR
Sbjct: 222 TILAPLDSPNTDGIDPDSCSYVRIEDCYVVSGDDIVAIKSGWDEYGISFGMPSQHIVIRR 281
Query: 275 VTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
+ G SP S IA+GSE SGG+++V AE I N GI +KT+ GRGGF+++I V+ + M
Sbjct: 282 LVGISPTSAIIALGSEMSGGIQDVRAEDIQAINSETGIRIKTSPGRGGFVKDIFVNRMTM 341
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
N + + G G HPD+K++PNALP V I+ ++ T V +G + G+ N+PF IC
Sbjct: 342 VNMKWAFTMTGSYGSHPDNKYDPNALPAVERISYSNIVATNVSVAGKLDGIANAPFKDIC 401
Query: 394 LSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTG 437
L+N+ + A P C+ + G + V P PCS L G
Sbjct: 402 LTNVTITMAAKSKKYPWNCTYIHGLSNAVYPQPCSLLEERPAEG 445
>gi|226491354|ref|NP_001148255.1| polygalacturonase [Zea mays]
gi|195616976|gb|ACG30318.1| polygalacturonase [Zea mays]
gi|219888097|gb|ACL54423.1| unknown [Zea mays]
gi|413941563|gb|AFW74212.1| polygalacturonase [Zea mays]
Length = 493
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 211/402 (52%), Positives = 281/402 (69%), Gaps = 2/402 (0%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTL-LYVPPGVYLTGSFNLTSHMTLYL 98
S+ +FG VGDG TLNT AFR A+ + GG L VPPG +LTGSFNLTS TL+L
Sbjct: 89 SVEEFGAVGDGATLNTAAFRRAVAELGARAVGGGGARLDVPPGRWLTGSFNLTSRFTLFL 148
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
+GAVI +QD WPLI PLPSYGRGRER G R++S IHG+GL DVVITG NGTIDGQG
Sbjct: 149 HRGAVILGSQDPEEWPLITPLPSYGRGRERLGPRHISLIHGEGLNDVVITGSNGTIDGQG 208
Query: 159 AIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILA 218
+WW +WR RTL TR +LIE +NS +++IS+V NSPFW +HPVYCSNVV++ +TILA
Sbjct: 209 HMWWELWRNRTLNHTRGHLIELVNSTNVLISSVTLSNSPFWTVHPVYCSNVVMKDLTILA 268
Query: 219 PADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGS 278
P D+PNTDGIDPDSSS VCIED YI +GDDLVAVKSGWD+YGI++G PS+ I I+RV+G+
Sbjct: 269 PLDAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISFGKPSTNIVIQRVSGT 328
Query: 279 SP-FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 337
+P SG+ GSE SGG+ NVL ++++N + +KT++GRGG+I NIT++ V ME +
Sbjct: 329 TPTCSGVGFGSEMSGGISNVLVRDLHVWNSAQAVRLKTDVGRGGYITNITIASVAMEKVK 388
Query: 338 KGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNI 397
I+ + DHPDD+++P ALP ++ + + DV G +Q++ +++ + + + GIC N
Sbjct: 389 VPIRFSRGADDHPDDRYDPAALPRISNVLVSDVVGVHLQRAPMLEAVPGAVYEGICFRNF 448
Query: 398 NLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGAC 439
+ +G+ C V G A+ V P PC E + C
Sbjct: 449 SFRGIRRQQDSRWHCESVYGEAHDVFPAPCEEFRRDGSSSWC 490
>gi|255589944|ref|XP_002535132.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223523955|gb|EEF27252.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 476
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 216/400 (54%), Positives = 283/400 (70%), Gaps = 4/400 (1%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R ++IT+FG VGDG TLNTKAF+ AI+ + GG L+VP G +LTGSF+L SH+
Sbjct: 49 RPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFSDKGGAKLFVPAGRWLTGSFDLISHL 108
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL+L K AVI + ++ +WP++ LPSYGRGRE PGGR+ S I+G L DVVITG+NGTI
Sbjct: 109 TLWLDKNAVILGSTNSDDWPVVDALPSYGRGRELPGGRHRSLIYGRNLTDVVITGDNGTI 168
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQG+IWW ++ +L +TRP+L+E MNS I+ISN+ F NSPFW IHPVYCS V+++ V
Sbjct: 169 DGQGSIWWTWFKTESLNYTRPHLVELMNSSGIVISNLTFINSPFWTIHPVYCSKVIVQNV 228
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
TI AP DSPNTDGIDPDSS +VCIED +ISTGDDL+A+KSGWDEYGI YG P ITIRR
Sbjct: 229 TIRAPLDSPNTDGIDPDSSDDVCIEDCFISTGDDLIAIKSGWDEYGILYGRPCRNITIRR 288
Query: 275 VTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
+ G + S GIA+GSE SGGV V AE+I YN GI +KT+ GRGG++RNI VS+V +
Sbjct: 289 LVGQTRSSAGIAIGSEMSGGVSEVHAENILFYNSNTGIRIKTSPGRGGYVRNIYVSNVTL 348
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
+ I+ G+ G+HPD+ ++P ALP++ ITI+ V G ++ +G++ G++ F IC
Sbjct: 349 NDVNIAIRFTGNYGEHPDEHYDPKALPIIERITIEHVMGDNIKYAGILDGIEADSFVNIC 408
Query: 394 LSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSS 433
LSNI+L + P CS + G + V P C L S
Sbjct: 409 LSNISLNVTS---KFPWNCSYIQGYSESVSPEICEPLRES 445
>gi|242032389|ref|XP_002463589.1| hypothetical protein SORBIDRAFT_01g002550 [Sorghum bicolor]
gi|241917443|gb|EER90587.1| hypothetical protein SORBIDRAFT_01g002550 [Sorghum bicolor]
Length = 459
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/424 (50%), Positives = 297/424 (70%), Gaps = 5/424 (1%)
Query: 18 FSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLY 77
+S S + C + P YR ++IT+FG +GDG TLNTKAF+ AI+ + GG L+
Sbjct: 6 WSTVSSIYCKDMPPNVYRPHSVTITEFGAIGDGVTLNTKAFQNAIFYLNSFADKGGAQLF 65
Query: 78 VPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFI 137
VP G +LTGSFNL SH+TL L K AVI + D+ +WP+I PLPSYGRGRE PG R+ S I
Sbjct: 66 VPAGRWLTGSFNLISHLTLSLDKDAVIIGSPDSSHWPVIDPLPSYGRGRELPGKRHQSLI 125
Query: 138 HGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSP 197
G L DV+ITG NG+IDGQGAIWW +R TL +TRP+L+E M S +++ISN+ F+NSP
Sbjct: 126 FGLNLTDVIITGANGSIDGQGAIWWGWFRNHTLNYTRPHLVELMYSTNVVISNLTFKNSP 185
Query: 198 FWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWD 257
FWNIHPVYCS V++++VTILAP +SPNTDG+ PDSS+NVCI Y+ GDD++ +KSGWD
Sbjct: 186 FWNIHPVYCSQVLVQHVTILAPLNSPNTDGVSPDSSTNVCINHCYVRNGDDVIVIKSGWD 245
Query: 258 EYGIAYGHPSSGITIRRVTGSSP-FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTN 316
EYGI++ PSS I+I +TG + +GIA GSE SGG+ V A + + N GI +KT
Sbjct: 246 EYGISFAQPSSNISISDITGETRGGAGIAFGSEMSGGISEVRAVGLRIVNSLHGIRIKTA 305
Query: 317 IGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQ 376
GRGG+++N+ ++DV M+N I+I G+ G+HPDDK++ ALPV++ ITIKDV G +
Sbjct: 306 PGRGGYVKNVYIADVSMDNVSMAIRITGNYGEHPDDKYDRTALPVISNITIKDVVGVNIG 365
Query: 377 QSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSS-QQ 435
+G+++G++ F+ ICLSN++L + ++ P CS + G + V P C +L S+ +Q
Sbjct: 366 VAGILEGIQGDNFSNICLSNVSL---SVQSAHPWNCSLIEGYSNSVIPESCEQLKSNCRQ 422
Query: 436 TGAC 439
T C
Sbjct: 423 TPIC 426
>gi|224083446|ref|XP_002307030.1| predicted protein [Populus trichocarpa]
gi|222856479|gb|EEE94026.1| predicted protein [Populus trichocarpa]
Length = 394
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 221/393 (56%), Positives = 295/393 (75%), Gaps = 3/393 (0%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
ISI DFGGVGDGKT NT+AFR A+ +Q GG L VP G ++TGSFNLTS+ TL+L
Sbjct: 1 ISIKDFGGVGDGKTSNTEAFRRAMRYVQGFGERGGAQLNVPEGRWVTGSFNLTSNFTLFL 60
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
+GAVI +QD WP+I PLPSYGRGRER GGR++S IHGDGL +VVITG NGTIDGQG
Sbjct: 61 EEGAVILGSQDPKEWPIIEPLPSYGRGRERLGGRHISLIHGDGLANVVITGNNGTIDGQG 120
Query: 159 AIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILA 218
+WW +W RTL TR +L+E MNS+ I+ISN+ F+NSPFW IHP+YCSN+V++ +TILA
Sbjct: 121 KMWWELWWNRTLEHTRGHLVELMNSQDILISNLTFRNSPFWTIHPIYCSNLVVKDMTILA 180
Query: 219 PADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGS 278
P ++PNTDGIDPDSS+NVCIED YI +GDDLVAVKSGWD+YGI PSS I IRRV+G+
Sbjct: 181 PLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIKMARPSSNIIIRRVSGT 240
Query: 279 SP-FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 337
+P SG+ +GSE SGG+ NV E +++++ G+ +KT+ GRGG+I NIT+SD+ ME +
Sbjct: 241 TPTCSGVGIGSEMSGGIFNVTIEDLHVWDSAAGVRIKTDKGRGGYIANITISDITMERVK 300
Query: 338 KGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNI 397
I+ + DHPD++++P A+PVV G++I ++ ++ +++G++++PF GIC+ NI
Sbjct: 301 IPIRFSSGSNDHPDERWDPKAVPVVKGVSITNLVSFNSTKAPVLEGIEDAPFGGICMKNI 360
Query: 398 NLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 430
+L GV +SP +C VSG A V P PC +L
Sbjct: 361 SLLGVV--SSPSWRCEFVSGFANDVFPTPCPQL 391
>gi|297816204|ref|XP_002875985.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297321823|gb|EFH52244.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 471
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/429 (50%), Positives = 294/429 (68%), Gaps = 5/429 (1%)
Query: 1 MFRFLVTLSILLSYFNCFSLASV---VTCS-GIVPMRYRNDKISITDFGGVGDGKTLNTK 56
M R + L +LL + +L SV + C + +R +SIT+FG VGDG TLNTK
Sbjct: 1 MKRSFLLLYVLLVHAFYGALCSVGGSLHCEYSNLASLHRPHSVSITEFGAVGDGVTLNTK 60
Query: 57 AFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLI 116
AF+ A++ GG L+VP G +LTGSF+L SH+TL+L GA I + + NWP++
Sbjct: 61 AFQNALFYPNSFSDKGGAKLFVPAGQWLTGSFDLISHLTLWLDSGATILGSTSSENWPVV 120
Query: 117 APLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPN 176
PLPSYGRGRE PG R+ S I+G L DVVITGENGTIDGQG++WW+ +R L +TRP+
Sbjct: 121 DPLPSYGRGRELPGRRHRSLIYGQNLTDVVITGENGTIDGQGSVWWDWFRNGELNYTRPH 180
Query: 177 LIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNV 236
L+E MNS +IISN+ F NSPFWNIHPVYC +VV++ +TILAP +SPNTDG+DPDSS+NV
Sbjct: 181 LVELMNSTGLIISNLTFLNSPFWNIHPVYCRDVVVKNLTILAPLESPNTDGVDPDSSTNV 240
Query: 237 CIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTG-SSPFSGIAVGSETSGGVE 295
CIED YI T DDLV++K+GWDEYGI+Y PSS I I R+TG ++ SGIA+GSE SGGV
Sbjct: 241 CIEDCYIVTRDDLVSIKTGWDEYGISYARPSSKIKINRLTGQTTSSSGIAIGSEMSGGVS 300
Query: 296 NVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFN 355
+ + ++L+N GI +KT+ GRGG++RN+ + +V ++N +K I+ G G+HPD F+
Sbjct: 301 EIYIKDLHLFNSNTGIRIKTSPGRGGYVRNVHILNVKLDNVKKAIRFTGKYGEHPDKNFD 360
Query: 356 PNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDV 415
P ALP + IT ++V G + +GL++G++ F IC N+ L+ P +CS+V
Sbjct: 361 PKALPAIEKITFENVNGDGIGVAGLLEGIEGDEFKNICFLNVTLRVKKNSKKSPWECSNV 420
Query: 416 SGSAYQVKP 424
G + V P
Sbjct: 421 RGYSQWVSP 429
>gi|297597216|ref|NP_001043594.2| Os01g0618900 [Oryza sativa Japonica Group]
gi|54290860|dbj|BAD61521.1| polygalacturonase-like [Oryza sativa Japonica Group]
gi|255673471|dbj|BAF05508.2| Os01g0618900 [Oryza sativa Japonica Group]
Length = 308
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 210/308 (68%), Positives = 260/308 (84%), Gaps = 2/308 (0%)
Query: 134 MSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIF 193
MS IHG+GLQDVVITG+NGTIDGQG+ WW+MW++ TLPFTRP+L+E MNS +++SNV+F
Sbjct: 1 MSLIHGNGLQDVVITGDNGTIDGQGSAWWDMWKKGTLPFTRPHLLELMNSSDVVVSNVVF 60
Query: 194 QNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVK 253
Q+SPFWNIHPVYCSNVVIR VT+LAP DSPNTDGIDPDSSSNVCIED YISTGDDL+A+K
Sbjct: 61 QDSPFWNIHPVYCSNVVIRNVTVLAPHDSPNTDGIDPDSSSNVCIEDCYISTGDDLIAIK 120
Query: 254 SGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHV 313
SGWDEYG+AYG PSS ITIRR+TGSSPF+G AVGSETSGGVE+VLAEH+N ++ G GIH+
Sbjct: 121 SGWDEYGMAYGRPSSHITIRRITGSSPFAGFAVGSETSGGVEHVLAEHLNFFSSGFGIHI 180
Query: 314 KTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGT 373
KTN GRGGFIRN+TVSDV +++ R G++IAGDVG HPDD+++ NALPVV+G+TIK+V G
Sbjct: 181 KTNTGRGGFIRNVTVSDVTLDSVRYGLRIAGDVGGHPDDRYDRNALPVVDGLTIKNVQGQ 240
Query: 374 KVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSS 433
++++G I+G+ S F+ ICLSN+ L G G P KC VSG+A V+P PC+EL+S+
Sbjct: 241 NIREAGSIKGIATSAFSRICLSNVKLNG--GAAVRPWKCEAVSGAALDVQPSPCTELTST 298
Query: 434 QQTGACSN 441
C+N
Sbjct: 299 SGMSFCTN 306
>gi|224096000|ref|XP_002310517.1| predicted protein [Populus trichocarpa]
gi|222853420|gb|EEE90967.1| predicted protein [Populus trichocarpa]
Length = 445
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/407 (54%), Positives = 299/407 (73%), Gaps = 3/407 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R +SI +FGGVGDGKT NT+ FR+AI +Q SGG L VP G ++TGSFNLTS+
Sbjct: 31 RKAVMSIREFGGVGDGKTSNTETFRKAIRYLQRFGESGGAQLNVPKGRWVTGSFNLTSNF 90
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL+L +GAVI +QD WP+I PLPSYGRGRER GGR++S +HGDGL +VVITG NGTI
Sbjct: 91 TLFLEEGAVILGSQDPKEWPIIEPLPSYGRGRERLGGRHISLVHGDGLTNVVITGNNGTI 150
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQG +WW +W RTL TR +L+E MNS +I+I+N+ F N+PFW IHPVYCSNVV++ +
Sbjct: 151 DGQGKMWWELWWNRTLEHTRGHLVELMNSNNILIANLTFCNAPFWTIHPVYCSNVVVKDM 210
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
TILAP +PNTDGIDPDSS+NVCIED YI +GDDLVAVKSGWD+YGI PSS I +RR
Sbjct: 211 TILAPLKAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIKMARPSSNIVVRR 270
Query: 275 VTGSSP-FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
V+G++P SG+ +GSE SGG+ N+ E +++++ G+ +KT+ GRGG+I NIT+S+V M
Sbjct: 271 VSGTTPTCSGVGIGSEMSGGIFNITIEDLHVWDSAAGVRIKTDNGRGGYIANITISNVTM 330
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
E + I+ + DHPD+ ++P A+PVV GI+I++V ++ +++G++++PF GIC
Sbjct: 331 ERVKVPIRFSRGSNDHPDEGWDPKAVPVVKGISIRNVISFNSTKAPVLEGVEDAPFGGIC 390
Query: 394 LSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACS 440
+ N++L GV +S C VSG A +V P PC +L S+ + CS
Sbjct: 391 MKNVSLLGVV--SSLSWHCEFVSGFADEVFPTPCPQLQSNISSSWCS 435
>gi|223948047|gb|ACN28107.1| unknown [Zea mays]
gi|414873755|tpg|DAA52312.1| TPA: polygalacturonase isoform 1 [Zea mays]
gi|414873756|tpg|DAA52313.1| TPA: polygalacturonase isoform 2 [Zea mays]
Length = 477
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/441 (48%), Positives = 302/441 (68%), Gaps = 7/441 (1%)
Query: 1 MFRFLVTLSILLSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFRE 60
+F+ L+ + ++ +S S + C + P YR ++IT+FG VGDG TLNTKAF+
Sbjct: 7 LFQVLLVFTAVIEI--QWSTVSSIYCKDMPPNVYRPHSVTITEFGAVGDGVTLNTKAFQN 64
Query: 61 AIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLP 120
AI+ + GG L+VP G +LTGSF+L SH+TL L K A+I + D+ +WP+I PLP
Sbjct: 65 AIFYLNSFADKGGAQLFVPAGRWLTGSFHLISHLTLSLDKDAIIIGSPDSSHWPVIDPLP 124
Query: 121 SYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEF 180
SYGRGR+ PG R+ S I G L DV+ITG NG+IDGQGAIWW + TL +TRP+L+E
Sbjct: 125 SYGRGRDLPGKRHQSLIFGLNLTDVIITGANGSIDGQGAIWWGWFHNHTLNYTRPHLVEL 184
Query: 181 MNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIED 240
M S +++ISN+ F+NSPFWNIHPVYCS V++R+VTILAP +SPNTDG+ PDSS+NVCI
Sbjct: 185 MYSTNVVISNLTFKNSPFWNIHPVYCSQVLVRHVTILAPLNSPNTDGVTPDSSTNVCINH 244
Query: 241 SYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP-FSGIAVGSETSGGVENVLA 299
Y+ G D++ +KSGWDEYGI++ PSS I+I +TG + SGIA GSE SGG+ V A
Sbjct: 245 CYVRNGGDVIVIKSGWDEYGISFAQPSSNISISDITGETRGGSGIAFGSEMSGGISEVRA 304
Query: 300 EHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNAL 359
+ + N GI +KT GRGG++ N+ ++DV M+N I+I G+ G+HPDDK++ AL
Sbjct: 305 VGLRIVNSLHGIRIKTAPGRGGYVENVYIADVSMDNVSMAIRITGNYGEHPDDKYDSTAL 364
Query: 360 PVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSA 419
PV++ ITIKDV G + +G+++G++ F+ ICLSN++L + ++ P CS + G +
Sbjct: 365 PVISNITIKDVVGVNIGVAGILEGIQGDNFSNICLSNVSL---SVQSAHPWNCSLIEGYS 421
Query: 420 YQVKPWPCSEL-SSSQQTGAC 439
V P C +L S+ +QT C
Sbjct: 422 NSVIPESCEQLRSNCRQTSIC 442
>gi|242077899|ref|XP_002443718.1| hypothetical protein SORBIDRAFT_07g000740 [Sorghum bicolor]
gi|241940068|gb|EES13213.1| hypothetical protein SORBIDRAFT_07g000740 [Sorghum bicolor]
Length = 497
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 209/401 (52%), Positives = 282/401 (70%), Gaps = 3/401 (0%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
S+ +FG VGDG T NT AFR A+ ++ +GG L VPPG +LTGSFNLTS TL+L
Sbjct: 96 SVEEFGAVGDGATPNTAAFRRAVAELEARAGAGGARLEVPPGRWLTGSFNLTSRFTLFLH 155
Query: 100 KGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGA 159
+GAVI +QD WPLIAPLPSYGRGRER G R++S IHG+GL DVVITG NGTIDGQG
Sbjct: 156 RGAVILGSQDPEEWPLIAPLPSYGRGRERLGPRHISLIHGEGLNDVVITGSNGTIDGQGN 215
Query: 160 IWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP 219
+WW +W RTL TR +LIE +NS +I+IS++ +NSPFW +HPVYCSNVV++ +TILAP
Sbjct: 216 MWWELWWNRTLNHTRGHLIELVNSTNILISSITLRNSPFWTVHPVYCSNVVMKDLTILAP 275
Query: 220 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS 279
++PNTDGIDPDSSS VCIED YI +GDDLVAVKSGWD+YGI+ G PS+ I I+RV+G++
Sbjct: 276 LNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISLGKPSTNIVIQRVSGTT 335
Query: 280 P-FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK 338
P SG+ GSE SGG+ NVL ++++N + +KT++GRGG+I NIT+S+V ME +
Sbjct: 336 PTCSGVGFGSEMSGGISNVLVRDLHVWNSAQAVRLKTDVGRGGYITNITISNVTMEKVKV 395
Query: 339 GIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNIN 398
I+ + DH DD ++ ALP ++ + I DV G +Q++ +++ + + + IC N +
Sbjct: 396 PIRFSRGADDHSDDNYDRTALPRISNVLISDVVGVDLQRAPMLEAVPGAVYEEICFRNFS 455
Query: 399 LQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGAC 439
L+G+ C V G A++V P PC E + + C
Sbjct: 456 LRGIRRQDR--WHCESVYGEAHEVFPAPCEEFRKNGSSSWC 494
>gi|357122663|ref|XP_003563034.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 475
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/443 (48%), Positives = 303/443 (68%), Gaps = 7/443 (1%)
Query: 1 MFRFLVTLSILLSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFRE 60
+FR L+ + ++ + S + C + YR ++IT+FG VGDG LNTKAF+
Sbjct: 7 VFRALLVFTAIVE--TQWPGVSGIYCKDMASGVYRPHSVTITEFGAVGDGVALNTKAFQN 64
Query: 61 AIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLP 120
AI+ + GG L+VP G +LTGSF+L SH+TL L K AVI + D+ NWP+I PLP
Sbjct: 65 AIFYLNSFADKGGAQLFVPAGRWLTGSFSLISHLTLSLDKDAVIIGSPDSSNWPVIDPLP 124
Query: 121 SYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEF 180
SYGRGRE PG R+ S I G L DV+ITG NGTIDGQGA+WW+ + TL +TRP+L+E
Sbjct: 125 SYGRGRELPGERHQSLIFGYNLTDVIITGANGTIDGQGAVWWDWFHNHTLNYTRPHLVEL 184
Query: 181 MNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIED 240
M S +++ISN+ F+NSPFWNIHPVYCS V++ ++TILAP DSPNTDGI+PDSS+N+CI+
Sbjct: 185 MYSTNVVISNLTFKNSPFWNIHPVYCSQVLVEHLTILAPLDSPNTDGINPDSSTNICIKH 244
Query: 241 SYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP-FSGIAVGSETSGGVENVLA 299
Y+ GDD++ +KSGWDEYGI++ HPSS I+I +TG + +GIA+GSE SGG+ V A
Sbjct: 245 CYVRNGDDVIVIKSGWDEYGISFAHPSSNISITNITGETRGGAGIAIGSEMSGGISEVRA 304
Query: 300 EHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNAL 359
E + + N GI +KT GRGG++RN+ ++DV M N I+I G+ G+HPD+ ++ NAL
Sbjct: 305 ERLRIVNSLHGIRIKTAPGRGGYVRNVYIADVSMHNVSMAIRITGNYGEHPDNNYDRNAL 364
Query: 360 PVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSA 419
P+++ ITI++V G V +G+++G++ F+ IC+SN++L + + P CS + G +
Sbjct: 365 PMISNITIENVVGINVGIAGILEGIEGDNFSSICISNVSL---SVQSMHPWNCSLIQGYS 421
Query: 420 YQVKPWPCSEL-SSSQQTGACSN 441
V P C +L + QT C N
Sbjct: 422 NSVIPESCDQLRTDCGQTPVCYN 444
>gi|226497942|ref|NP_001151479.1| polygalacturonase precursor [Zea mays]
gi|195647062|gb|ACG42999.1| polygalacturonase [Zea mays]
Length = 477
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/441 (48%), Positives = 302/441 (68%), Gaps = 7/441 (1%)
Query: 1 MFRFLVTLSILLSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFRE 60
+F+ L+ + ++ +S S + C + P YR ++IT+FG VGDG TLNTKAF+
Sbjct: 7 LFQVLLVFTAVIEI--QWSTVSSIYCKDMPPNVYRPHSVTITEFGAVGDGVTLNTKAFQN 64
Query: 61 AIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLP 120
AI+ + GG L+VP G +LTGSF+L SH+TL L K A+I + D+ +WP+I PLP
Sbjct: 65 AIFYLNSFADKGGAQLFVPAGRWLTGSFHLISHLTLSLDKDAIIIGSPDSSHWPVIDPLP 124
Query: 121 SYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEF 180
SYGRGR+ PG R+ S I G L DV+ITG NG+IDGQGAIWW + TL +TRP+L+E
Sbjct: 125 SYGRGRDLPGKRHQSLIFGLNLTDVIITGANGSIDGQGAIWWGWFHNHTLNYTRPHLVEL 184
Query: 181 MNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIED 240
M S +++ISN+ F+NSPFWNIHPVYCS V++++VTILAP +SPNTDG+ PDSS+NVCI
Sbjct: 185 MYSTNVVISNLTFKNSPFWNIHPVYCSQVLVQHVTILAPLNSPNTDGVTPDSSTNVCINH 244
Query: 241 SYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP-FSGIAVGSETSGGVENVLA 299
Y+ G D++ +KSGWDEYGI++ PSS I+I +TG + SGIA GSE SGG+ V A
Sbjct: 245 CYVRNGGDVIVIKSGWDEYGISFAQPSSNISISDITGETRGGSGIAFGSEMSGGISEVRA 304
Query: 300 EHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNAL 359
+ + N GI +KT GRGG++ N+ ++DV M+N I+I G+ G+HPDDK++ AL
Sbjct: 305 VGLRIVNSLHGIRIKTAPGRGGYVENVYIADVSMDNVSMAIRITGNYGEHPDDKYDSTAL 364
Query: 360 PVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSA 419
PV++ ITIKDV G + +G+++G++ F+ ICLSN++L + ++ P CS + G +
Sbjct: 365 PVISNITIKDVVGVNIGVAGILEGIQGDNFSNICLSNVSL---SVQSAHPWNCSLIEGYS 421
Query: 420 YQVKPWPCSEL-SSSQQTGAC 439
V P C +L S+ +QT C
Sbjct: 422 NSVIPESCEQLRSNCRQTSIC 442
>gi|356513351|ref|XP_003525377.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 469
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 213/412 (51%), Positives = 281/412 (68%), Gaps = 3/412 (0%)
Query: 32 MRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLT 91
M R S+ +FGGVGDG TLNTKAF+ AI + SGG+ LYVPPG +LTGSFNLT
Sbjct: 36 MSCRAYSASLEEFGGVGDGTTLNTKAFQAAIDHLSQYASSGGSQLYVPPGKWLTGSFNLT 95
Query: 92 SHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGEN 151
SH TL+L K AVI A+QD +WP+I PLPSYGRGR+ GGR+ S I G L DV+ITG+N
Sbjct: 96 SHFTLFLHKDAVILASQDENDWPVIDPLPSYGRGRDTQGGRFSSLIFGTNLTDVIITGDN 155
Query: 152 GTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVI 211
GTIDGQG +WW +R+ L +TRP LIE M S ++ ISN+ NSP WN+HP+Y SN+V+
Sbjct: 156 GTIDGQGDLWWQKFRKGELKYTRPYLIEIMYSDNVQISNLTLVNSPSWNVHPIYSSNLVV 215
Query: 212 RYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGIT 271
+ +TILAP SPNTDGI+PDS +N IED YI +GDD VAVKSGWDEYGIAYG P+ +
Sbjct: 216 QGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLV 275
Query: 272 IRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSD 330
IRR+T SPFS IA+GSE SGG+++V AE I N G+ +KT +GRGG++++I V
Sbjct: 276 IRRLTCISPFSAVIALGSEMSGGIQDVRAEDIVAINSESGVRIKTAVGRGGYVKDIFVRR 335
Query: 331 VYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT 390
+ M+ + + G+ G H DD ++PNALPV+ I +D+ V + ++G+ PFT
Sbjct: 336 MTMKTMKWAFWMTGNYGSHADDNYDPNALPVIQNINYRDMVAENVTMAARLEGISGDPFT 395
Query: 391 GICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL--SSSQQTGACS 440
GIC+SN+ +Q P C+D++G + V P PC L ++ GAC+
Sbjct: 396 GICISNVTIQLAKKAKKVPWTCTDIAGISSDVTPAPCGLLPDQGEEKIGACT 447
>gi|125559874|gb|EAZ05322.1| hypothetical protein OsI_27527 [Oryza sativa Indica Group]
Length = 482
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 209/408 (51%), Positives = 283/408 (69%), Gaps = 3/408 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R S+ +FG VGDG T NT AFR A+ ++ GG L VPPG ++TGSFNLTS
Sbjct: 76 RAASASVEEFGAVGDGVTSNTAAFRRAVAALEARAGGGGARLEVPPGRWVTGSFNLTSRF 135
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL+L GA+I +QD WPLIAPLPSYGRGRER G R++S IHG+GL DVVITG NGTI
Sbjct: 136 TLFLHHGAIILGSQDPEEWPLIAPLPSYGRGRERLGPRHISLIHGEGLDDVVITGNNGTI 195
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQG IWW++W RTL TR +LIE ++S +I+ISN+ +NSPFW +HPVYC NVVIR +
Sbjct: 196 DGQGRIWWDLWWNRTLNHTRGHLIELVDSTNIMISNITLRNSPFWTVHPVYCRNVVIRNL 255
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
T+LAP ++PNTDGIDPDSSS VCIED YI +GDDLVAVKSGWD+YGI+ G PSS I I+R
Sbjct: 256 TVLAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQR 315
Query: 275 VTGSSP-FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
V+G++P SG+ GSE SGG+ NV+ ++++N + +KT++GRGG+I NIT+ +V M
Sbjct: 316 VSGTTPTCSGVGFGSEMSGGISNVIIRDLHVWNSAQAVRIKTDVGRGGYITNITIENVRM 375
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
E + I+ + DH DDK++ +ALP ++ + I+DV G +Q++ +++ + + + GIC
Sbjct: 376 EKVKVPIRFSRGADDHSDDKYDRSALPKISDVRIRDVVGVDLQRAPMLEAVHGAVYEGIC 435
Query: 394 LSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSN 441
N++L + C V G A+ V P PC E + + C +
Sbjct: 436 FRNVSLTVIK--RQDRWHCESVYGEAHDVLPAPCEEFRRNGSSSWCGH 481
>gi|115474399|ref|NP_001060796.1| Os08g0107300 [Oryza sativa Japonica Group]
gi|42408232|dbj|BAD09389.1| putative exo-poly-alpha-D-galacturonosidase precursor [Oryza sativa
Japonica Group]
gi|113622765|dbj|BAF22710.1| Os08g0107300 [Oryza sativa Japonica Group]
Length = 482
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 209/408 (51%), Positives = 283/408 (69%), Gaps = 3/408 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R S+ +FG VGDG T NT AFR A+ ++ GG L VPPG ++TGSFNLTS
Sbjct: 76 RAASASVEEFGAVGDGVTSNTAAFRRAVAALEARAGGGGARLEVPPGRWVTGSFNLTSRF 135
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL+L GA+I +QD WPLIAPLPSYGRGRER G R++S IHG+GL DVVITG NGTI
Sbjct: 136 TLFLHHGAIILGSQDPEEWPLIAPLPSYGRGRERLGPRHISLIHGEGLDDVVITGNNGTI 195
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQG IWW++W RTL TR +LIE ++S +I+ISN+ +NSPFW +HPVYC NVVIR +
Sbjct: 196 DGQGRIWWDLWWNRTLNHTRGHLIELVDSTNIMISNITLRNSPFWTVHPVYCRNVVIRNL 255
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
T+LAP ++PNTDGIDPDSSS VCIED YI +GDDLVAVKSGWD+YGI+ G PSS I I+R
Sbjct: 256 TVLAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQR 315
Query: 275 VTGSSP-FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
V+G++P SG+ GSE SGG+ NV+ ++++N + +KT++GRGG+I NIT+ +V M
Sbjct: 316 VSGTTPTCSGVGFGSEMSGGISNVIIRDLHVWNSAQAVRIKTDVGRGGYITNITIENVRM 375
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
E + I+ + DH DDK++ +ALP ++ + I+DV G +Q++ +++ + + + GIC
Sbjct: 376 EKVKVPIRFSRGADDHSDDKYDRSALPKISDVRIRDVVGVDLQRAPMLEAVHGAVYEGIC 435
Query: 394 LSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSN 441
N++L + C V G A+ V P PC E + + C +
Sbjct: 436 FRNVSLTVIK--RQDRWHCESVYGEAHDVLPAPCEEFRRNGSSSWCGH 481
>gi|297743929|emb|CBI36899.3| unnamed protein product [Vitis vinifera]
Length = 477
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/413 (53%), Positives = 281/413 (68%), Gaps = 4/413 (0%)
Query: 32 MRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLT 91
+ R +SI +FG VGDGKT NT AF AI+ ++ GG LYVPPG +LTGSFNLT
Sbjct: 55 LEPRPHSVSILEFGAVGDGKTSNTIAFENAIFYLKSFADKGGAQLYVPPGRWLTGSFNLT 114
Query: 92 SHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGEN 151
SH+TL+L +GA I +QD +W ++ PLPSYGRG E PGGRY S I+G L DVVITG N
Sbjct: 115 SHLTLFLERGATILGSQDFTHWEILDPLPSYGRGIELPGGRYRSLINGPNLSDVVITGNN 174
Query: 152 GTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVI 211
GTIDGQG++WW + +L ++RP+++EF++S IIISN+ F NSP WNIHPVYCSNV +
Sbjct: 175 GTIDGQGSVWWENFSSHSLNYSRPHIVEFISSNDIIISNLTFLNSPAWNIHPVYCSNVWV 234
Query: 212 RYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGIT 271
+ +T AP +SP T G+ PDSS +CIEDS IS G D + +KSGWDEYGIAYG P+ +
Sbjct: 235 QNITAYAPPESPRTSGVVPDSSEYICIEDSNISMGYDAIVLKSGWDEYGIAYGKPTRNVH 294
Query: 272 IRRV-TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSD 330
IRRV SS SG+A GSE SGG+ ++L EHI+L + GI +KT GRGG+I+ I +SD
Sbjct: 295 IRRVWLQSSSGSGLAFGSEMSGGISDILVEHIHLQDSSTGIKLKTTKGRGGYIKGILISD 354
Query: 331 VYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT 390
V MEN I G HPDDK++P ALPVV+GIT KD+ GT V +G G+ SPFT
Sbjct: 355 VEMENVGLTIGATGQCRSHPDDKYDPGALPVVDGITFKDMVGTNVSIAGNFSGIYESPFT 414
Query: 391 GICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELS--SSQQTGACSN 441
ICL NI+L + +S P CS+V GS+ V P PC L +S CS+
Sbjct: 415 SICLFNISLS-ITSNSSKPWLCSNVFGSSECVSPEPCPNLQTKTSNSFSTCSS 466
>gi|125601928|gb|EAZ41253.1| hypothetical protein OsJ_25761 [Oryza sativa Japonica Group]
Length = 482
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 209/408 (51%), Positives = 283/408 (69%), Gaps = 3/408 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R S+ +FG VGDG T NT AFR A+ ++ GG L VPPG ++TGSFNLTS
Sbjct: 76 RAASASVEEFGAVGDGVTSNTAAFRRAVAALEARAGGGGARLEVPPGRWVTGSFNLTSRF 135
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL+L GA+I +QD WPLIAPLPSYGRGRER G R++S IHG+GL DVVITG NGTI
Sbjct: 136 TLFLHHGAIILGSQDPEEWPLIAPLPSYGRGRERLGPRHISLIHGEGLDDVVITGNNGTI 195
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQG IWW++W RTL TR +LIE ++S +I+ISN+ +NSPFW +HPVYC NVVIR +
Sbjct: 196 DGQGRIWWDLWWNRTLNHTRGHLIELVDSTNIMISNITLRNSPFWTVHPVYCRNVVIRNL 255
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
T+LAP ++PNTDGIDPDSSS VCIED YI +GDDLVAVKSGWD+YGI+ G PSS I I+R
Sbjct: 256 TVLAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQR 315
Query: 275 VTGSSP-FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
V+G++P SG+ GSE SGG+ NV+ ++++N + +KT++GRGG+I NIT+ +V M
Sbjct: 316 VSGTTPTCSGVGFGSEMSGGISNVIIRDLHVWNSAQAVRIKTDVGRGGYITNITIENVRM 375
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
E + I+ + DH DDK++ +ALP ++ + I+DV G +Q++ +++ + + + GIC
Sbjct: 376 EKVKVPIRFSRGADDHSDDKYDRSALPKISDVRIRDVVGVDLQRAPMLEAVHGAVYEGIC 435
Query: 394 LSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSN 441
N++L + C V G A+ V P PC E + + C +
Sbjct: 436 FRNVSLTVIK--RQDRWHCESVYGEAHDVLPAPCEEFRRNGSSSWCGH 481
>gi|225437457|ref|XP_002269037.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 542
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/419 (52%), Positives = 282/419 (67%), Gaps = 4/419 (0%)
Query: 26 CSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLT 85
C + R +SI +FG VGDGKT NT AF AI+ ++ GG LYVPPG +LT
Sbjct: 114 CKYKKSLEPRPHSVSILEFGAVGDGKTSNTIAFENAIFYLKSFADKGGAQLYVPPGRWLT 173
Query: 86 GSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDV 145
GSFNLTSH+TL+L +GA I +QD +W ++ PLPSYGRG E PGGRY S I+G L DV
Sbjct: 174 GSFNLTSHLTLFLERGATILGSQDFTHWEILDPLPSYGRGIELPGGRYRSLINGPNLSDV 233
Query: 146 VITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVY 205
VITG NGTIDGQG++WW + +L ++RP+++EF++S IIISN+ F NSP WNIHPVY
Sbjct: 234 VITGNNGTIDGQGSVWWENFSSHSLNYSRPHIVEFISSNDIIISNLTFLNSPAWNIHPVY 293
Query: 206 CSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH 265
CSNV ++ +T AP +SP T G+ PDSS +CIEDS IS G D + +KSGWDEYGIAYG
Sbjct: 294 CSNVWVQNITAYAPPESPRTSGVVPDSSEYICIEDSNISMGYDAIVLKSGWDEYGIAYGK 353
Query: 266 PSSGITIRRV-TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 324
P+ + IRRV SS SG+A GSE SGG+ ++L EHI+L + GI +KT GRGG+I+
Sbjct: 354 PTRNVHIRRVWLQSSSGSGLAFGSEMSGGISDILVEHIHLQDSSTGIKLKTTKGRGGYIK 413
Query: 325 NITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGL 384
I +SDV MEN I G HPDDK++P ALPVV+GIT KD+ GT V +G G+
Sbjct: 414 GILISDVEMENVGLTIGATGQCRSHPDDKYDPGALPVVDGITFKDMVGTNVSIAGNFSGI 473
Query: 385 KNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELS--SSQQTGACSN 441
SPFT ICL NI+L + +S P CS+V GS+ V P PC L +S CS+
Sbjct: 474 YESPFTSICLFNISLS-ITSNSSKPWLCSNVFGSSECVSPEPCPNLQTKTSNSFSTCSS 531
>gi|296083315|emb|CBI22951.3| unnamed protein product [Vitis vinifera]
Length = 482
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 213/407 (52%), Positives = 286/407 (70%), Gaps = 10/407 (2%)
Query: 26 CSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLT 85
C+ + + R +SI +FG VGDGKTLNT AF+ AI+ ++ GG LYVPPG +LT
Sbjct: 26 CTNSLTLDPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLT 85
Query: 86 GSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDV 145
GSFNLTSH+TL+L +GAVI +QD +W +I PLPSYGRG E PGGRY S I+G L+DV
Sbjct: 86 GSFNLTSHLTLFLERGAVILGSQDPSHWEVIEPLPSYGRGIELPGGRYRSLINGYMLRDV 145
Query: 146 VITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVY 205
VITG+NGTI+GQG++WW+ + +L ++RP+L+EF+ S ++++SN+ F N+P +NIHPVY
Sbjct: 146 VITGDNGTINGQGSVWWDWFTSHSLNYSRPHLVEFLASTNVVVSNLTFLNAPAYNIHPVY 205
Query: 206 CSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH 265
CSNV ++ +++ AP +SP T GI PDSS + CIED I+ G D +A+KSGWDEYGIAYG
Sbjct: 206 CSNVRVQNISVYAPPESPYTVGIVPDSSDSTCIEDCSIAMGHDAIALKSGWDEYGIAYGR 265
Query: 266 PSSGITIRRVT-GSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 324
P++ + IRRV SS S +A GSE SGG+ NV E ++LYN GI +T GRGG+I+
Sbjct: 266 PTTNVHIRRVNLQSSSGSSLAFGSEMSGGISNVCVEQVHLYNSFSGIEFRTTKGRGGYIQ 325
Query: 325 NITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGL 384
I +SDV MEN G +G HPDD F+PNALPV++ IT+++V GT + +G G+
Sbjct: 326 EIIISDVAMENIHTAFSATGQIGSHPDDHFDPNALPVLDHITLQNVIGTNITIAGSFTGI 385
Query: 385 KNSPFTGICLSNINLQGVAGPTSPPLK----CSDVSGSAYQVKPWPC 427
+ SPFT ICLSNI+L T+PP CS+VSG + V P PC
Sbjct: 386 QESPFTSICLSNISLS-----TTPPASISWVCSNVSGFSQWVFPEPC 427
>gi|388512935|gb|AFK44529.1| unknown [Lotus japonicus]
Length = 469
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 212/404 (52%), Positives = 279/404 (69%), Gaps = 3/404 (0%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
S+TDFGGVGDG TLNT+AFR+AI + +GG+ LYVPPG +LTGSFNLTSH TL++
Sbjct: 44 SVTDFGGVGDGTTLNTQAFRKAIEHLSQYSSNGGSQLYVPPGRWLTGSFNLTSHFTLFIH 103
Query: 100 KGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGA 159
K AVI +QD WP+I PLPSYGRGR+ GGR+ S I G L DV+ITG+NGT+DGQG
Sbjct: 104 KDAVILGSQDENEWPVIDPLPSYGRGRDTQGGRFSSLIFGTHLTDVIITGDNGTLDGQGD 163
Query: 160 IWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP 219
+WW + + L +TRP LIE M S ++ ISN+ NSP WNIHPVYCSNV+++ +TILAP
Sbjct: 164 LWWKKFHNKQLQYTRPYLIEIMYSDNVQISNLTLVNSPSWNIHPVYCSNVIVQGITILAP 223
Query: 220 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS 279
SPNTDGI+PDS +N IED YI +GDD VAVKSGWDEYGI+YG P+ + IRR+T S
Sbjct: 224 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGISYGMPTKHLVIRRLTCIS 283
Query: 280 PFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK 338
P S IA+GSE SGG+E+V AE I N G+ +KT +GRGG++R+I V + M+ +
Sbjct: 284 PTSAVIALGSEMSGGIEDVRAEDILAINSESGVRIKTAVGRGGYVRDIYVRRMTMKTMKW 343
Query: 339 GIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNIN 398
+ GD G H D+ ++PNA+PV+ I +D+ V + + G+ +PFTGIC+SN+
Sbjct: 344 VFWMTGDYGSHADNNYDPNAIPVIENINYRDMVAENVTMAARLGGISGAPFTGICISNVT 403
Query: 399 LQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL--SSSQQTGACS 440
++ P C+DVSG + V P PC L + ++ GACS
Sbjct: 404 IELAKKAKKVPWTCTDVSGISSGVTPEPCELLPGQAEEKFGACS 447
>gi|225431820|ref|XP_002273305.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 457
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 212/403 (52%), Positives = 284/403 (70%), Gaps = 2/403 (0%)
Query: 26 CSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLT 85
C+ + + R +SI +FG VGDGKTLNT AF+ AI+ ++ GG LYVPPG +LT
Sbjct: 28 CTNSLTLDPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLT 87
Query: 86 GSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDV 145
GSFNLTSH+TL+L +GAVI +QD +W +I PLPSYGRG E PGGRY S I+G L+DV
Sbjct: 88 GSFNLTSHLTLFLERGAVILGSQDPSHWEVIEPLPSYGRGIELPGGRYRSLINGYMLRDV 147
Query: 146 VITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVY 205
VITG+NGTI+GQG++WW+ + +L ++RP+L+EF+ S ++++SN+ F N+P +NIHPVY
Sbjct: 148 VITGDNGTINGQGSVWWDWFTSHSLNYSRPHLVEFLASTNVVVSNLTFLNAPAYNIHPVY 207
Query: 206 CSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH 265
CSNV ++ +++ AP +SP T GI PDSS + CIED I+ G D +A+KSGWDEYGIAYG
Sbjct: 208 CSNVRVQNISVYAPPESPYTVGIVPDSSDSTCIEDCSIAMGHDAIALKSGWDEYGIAYGR 267
Query: 266 PSSGITIRRVT-GSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 324
P++ + IRRV SS S +A GSE SGG+ NV E ++LYN GI +T GRGG+I+
Sbjct: 268 PTTNVHIRRVNLQSSSGSSLAFGSEMSGGISNVCVEQVHLYNSFSGIEFRTTKGRGGYIQ 327
Query: 325 NITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGL 384
I +SDV MEN G +G HPDD F+PNALPV++ IT+++V GT + +G G+
Sbjct: 328 EIIISDVAMENIHTAFSATGQIGSHPDDHFDPNALPVLDHITLQNVIGTNITIAGSFTGI 387
Query: 385 KNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPC 427
+ SPFT ICLSNI+L P S CS+VSG + V P PC
Sbjct: 388 QESPFTSICLSNISLS-TTPPASISWVCSNVSGFSQWVFPEPC 429
>gi|388499792|gb|AFK37962.1| unknown [Lotus japonicus]
Length = 469
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 211/404 (52%), Positives = 279/404 (69%), Gaps = 3/404 (0%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
S+TDFGGVGDG TLNT+AFR+AI + +GG+ LYVPPG +LTGS NLTSH TL++
Sbjct: 44 SVTDFGGVGDGTTLNTQAFRKAIEHLSQYSSNGGSQLYVPPGRWLTGSLNLTSHFTLFIH 103
Query: 100 KGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGA 159
K AVI +QD WP+I PLPSYGRGR+ GGR+ S I G L DV+ITG+NGT+DGQG
Sbjct: 104 KDAVILGSQDENEWPVIDPLPSYGRGRDTQGGRFSSLIFGTHLTDVIITGDNGTLDGQGD 163
Query: 160 IWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP 219
+WW + + L +TRP LIE M S ++ ISN+ NSP WNIHPVYCSNV+++ +TILAP
Sbjct: 164 LWWKKFHNKQLQYTRPYLIEIMYSDNVQISNLTLVNSPSWNIHPVYCSNVIVQGITILAP 223
Query: 220 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS 279
SPNTDGI+PDS +N IED YI +GDD VAVKSGWDEYGI+YG P+ + IRR+T S
Sbjct: 224 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGISYGMPTKHLVIRRLTCIS 283
Query: 280 PFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK 338
P S IA+GSE SGG+E+V AE I N G+ +KT +GRGG++R+I V + M+ +
Sbjct: 284 PTSAVIALGSEMSGGIEDVRAEDILAINSESGVRIKTAVGRGGYVRDIYVRRMTMKTMKW 343
Query: 339 GIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNIN 398
+ GD G H D+ ++PNA+PV+ I +D+ V + ++G+ +PFTGIC+SN+
Sbjct: 344 VFWMTGDYGSHADNNYDPNAIPVIENINYRDMVAENVTMAARLEGISGAPFTGICISNVT 403
Query: 399 LQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL--SSSQQTGACS 440
++ P C+DVSG + V P PC L + ++ GACS
Sbjct: 404 IELAKKAKKVPWTCTDVSGISSGVTPEPCELLPGQAEEKFGACS 447
>gi|115456423|ref|NP_001051812.1| Os03g0833800 [Oryza sativa Japonica Group]
gi|40714685|gb|AAR88591.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|108711938|gb|ABF99733.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|108711939|gb|ABF99734.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113550283|dbj|BAF13726.1| Os03g0833800 [Oryza sativa Japonica Group]
gi|215694675|dbj|BAG89866.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 476
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/445 (49%), Positives = 301/445 (67%), Gaps = 9/445 (2%)
Query: 1 MFRFLVTLSILLSYFNC----FSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTK 56
M R L +LL + +S S C + YR ++IT+FG VGDG TLNTK
Sbjct: 1 MRRSASLLRVLLVFITMVGTQWSNVSSTYCKDMASSVYRPHSVTITEFGAVGDGVTLNTK 60
Query: 57 AFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLI 116
AF+ AI+ + GG L+VP G +LTGSF+L SH+TL L K A I + D+ +WP+I
Sbjct: 61 AFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFSLISHLTLSLDKDAEIIGSPDSSDWPVI 120
Query: 117 APLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPN 176
PLPSYGRGRE PG R+ S I G L DV+ITG NGTIDGQGAIWW+ + TL +TRP+
Sbjct: 121 DPLPSYGRGRELPGKRHQSLIFGTNLTDVIITGANGTIDGQGAIWWDWFHSNTLNYTRPH 180
Query: 177 LIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNV 236
L+E M S ++ISN+ F+NSPFWNIHPVYCS V++++VTILAP +SPNTDGIDPDSS+NV
Sbjct: 181 LVELMYSTDVVISNLTFKNSPFWNIHPVYCSQVLVQHVTILAPLNSPNTDGIDPDSSTNV 240
Query: 237 CIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP-FSGIAVGSETSGGVE 295
CI+ Y+ GDD++ +KSGWDEYGI++ PS+ I+I +TG + +GIA GSE SGG+
Sbjct: 241 CIDHCYVRNGDDVIVIKSGWDEYGISFARPSTNISISNITGETRGGAGIAFGSEMSGGIS 300
Query: 296 NVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFN 355
V AE + + N GI +KT GRGG+++N+ +SDV M+N I+I G+ G+HPDDK++
Sbjct: 301 EVRAEGLRIVNSMHGIRIKTAPGRGGYVKNVYISDVSMDNVSMAIRITGNFGEHPDDKYD 360
Query: 356 PNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDV 415
NALP+++ ITI++V G V +G+++G++ F+ ICLSN++L + + P CS +
Sbjct: 361 RNALPMISNITIENVVGVNVGVAGILEGIEGDNFSSICLSNVSL---SVQSMHPWNCSLI 417
Query: 416 SGSAYQVKPWPCSEL-SSSQQTGAC 439
G + V P C +L + QT C
Sbjct: 418 EGYSNSVIPESCEQLRTDCGQTPIC 442
>gi|356528677|ref|XP_003532926.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 494
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 210/412 (50%), Positives = 280/412 (67%), Gaps = 3/412 (0%)
Query: 32 MRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLT 91
M R S+ +FGGVGDG TLNTKAF+ AI + SGG+ LYVPPG +LTGSFNLT
Sbjct: 61 MSCRAYSASLEEFGGVGDGTTLNTKAFQAAIENLSQYAASGGSQLYVPPGKWLTGSFNLT 120
Query: 92 SHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGEN 151
SH TL+L K AVI A+QD +WP+I PLPSYGRGR+ GGR+ S I G L DV+ITG+N
Sbjct: 121 SHFTLFLHKDAVILASQDENDWPVIDPLPSYGRGRDTQGGRFSSLIFGTNLTDVIITGDN 180
Query: 152 GTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVI 211
GTIDGQG +WW + + L +TRP L+E M S ++ ISN+ NSP WN+HP+Y SNVV+
Sbjct: 181 GTIDGQGDLWWQKFHKGELKYTRPYLVEIMYSDNVQISNLTLVNSPSWNVHPIYSSNVVV 240
Query: 212 RYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGIT 271
+ +TILAP SPNTDGI+PDS ++ IED YI +GDD VAVKSGWDEYGIAYG P+ +
Sbjct: 241 QGITILAPVTSPNTDGINPDSCTDTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLV 300
Query: 272 IRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSD 330
IRR+T SPFS IA+GSE SGG++++ AE I N G+ +KT +GRGG++++I V
Sbjct: 301 IRRLTCISPFSAAIALGSEMSGGIQDMRAEDIVAINTESGVRIKTAVGRGGYVKDIFVRR 360
Query: 331 VYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT 390
+ M+ + + G+ G H DD ++PNALPV+ I +D+ V + ++G+ PFT
Sbjct: 361 MTMKTMKWAFWMTGNYGSHADDNYDPNALPVIQNINYRDMVAENVTMAARLEGISGDPFT 420
Query: 391 GICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL--SSSQQTGACS 440
GIC+SN+ +Q P C+D++G + V P PC L ++ GAC+
Sbjct: 421 GICISNVTIQLAKKAKKVPWTCTDIAGISSDVTPAPCDLLPDQGEEKIGACT 472
>gi|224134791|ref|XP_002327490.1| predicted protein [Populus trichocarpa]
gi|222836044|gb|EEE74465.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 204/397 (51%), Positives = 269/397 (67%), Gaps = 1/397 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R +TDFGGVGDGKT NTKAF+ AI + GG L VPPG +LTGSFNL+SH
Sbjct: 28 RKHSAVLTDFGGVGDGKTSNTKAFKAAIAELSQYASDGGAQLIVPPGKWLTGSFNLSSHF 87
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL+L K AV+ A+QD WP PLPSYG GR+ GR+ S I G L DVV+TG NGTI
Sbjct: 88 TLFLHKDAVLLASQDEAEWPAFPPLPSYGVGRDEHAGRFSSLIFGTHLTDVVVTGNNGTI 147
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQGA+WW+ + Q+ L TRP LIEF+ S + ISN+ NSP WN+HP YCSNV+I+++
Sbjct: 148 DGQGAVWWDKFHQKKLKLTRPYLIEFLYSDQVQISNLTLINSPSWNVHPTYCSNVLIQWL 207
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
TILAP DSPNTDGI+PDSSSNV IEDS++ +GDD +AVKSGWDEYGI +G P+ + IRR
Sbjct: 208 TILAPVDSPNTDGINPDSSSNVRIEDSFVVSGDDCIAVKSGWDEYGIKFGRPTQHLVIRR 267
Query: 275 VTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
T SP S IA+GSE SGG+++V AE I + G+ +KT +GRG ++++I V + +
Sbjct: 268 FTCISPDSATIALGSEMSGGIQDVRAEDITALSTQSGVRIKTAVGRGAYVKDIFVRRMTL 327
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
+ + + G G HPD ++P ALP + GI+ KD+ V S ++G++N PFTGIC
Sbjct: 328 KTMKYAFWMTGSYGSHPDTGYDPKALPEIKGISYKDIVAENVTYSARLEGIENDPFTGIC 387
Query: 394 LSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 430
+SN+N+ P C+D+ G + +V P PC+ L
Sbjct: 388 ISNVNISLTQKPKELQWNCTDIQGVSSKVTPQPCAAL 424
>gi|357464681|ref|XP_003602622.1| Germin-like protein [Medicago truncatula]
gi|355491670|gb|AES72873.1| Germin-like protein [Medicago truncatula]
Length = 775
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/443 (51%), Positives = 309/443 (69%), Gaps = 13/443 (2%)
Query: 3 RFLVTLSILLSYFNCFSLASVVTCSGI---VPMRYRNDKI--SITDFGGVGDGKTLNTKA 57
R L LSILLS SL TCSG VP R KI SI DFGGVGDGKT NT++
Sbjct: 39 RSLFPLSILLSQQPQPSLVDPTTCSGFFNNVPPR----KIIKSIVDFGGVGDGKTSNTQS 94
Query: 58 FREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIA 117
F+ AI +Q R GG+ L +P G +LTGSFNLTS TL+L GAV+ +QD WP+I
Sbjct: 95 FQRAIRYMQRFRGKGGSQLNIPNGTWLTGSFNLTSDFTLFLHHGAVVLGSQDIKEWPIIE 154
Query: 118 PLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNL 177
PLPSYGRGRER GGR++S IH +G+++VVITGENGT+DGQG +WW +W RTL TR +L
Sbjct: 155 PLPSYGRGRERLGGRHISLIHANGVRNVVITGENGTVDGQGRMWWELWWNRTLVHTRGHL 214
Query: 178 IEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVC 237
+E MNS ++++SN+ F+NSPFW IHPVYCSNVVI+ +TILAP ++PNTDGIDPDSS+NVC
Sbjct: 215 LELMNSENVLVSNLTFRNSPFWTIHPVYCSNVVIKGMTILAPLNAPNTDGIDPDSSTNVC 274
Query: 238 IEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP-FSGIAVGSETSGGVEN 296
IED+YI +GDDLVA+KSGWD+YGIA PS+ I + RV+G++P SG+ +GSE SGG+ N
Sbjct: 275 IEDNYIESGDDLVAIKSGWDQYGIAVAKPSTNIIVSRVSGTTPTCSGVGIGSEMSGGISN 334
Query: 297 VLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNP 356
+ E+++++N G+ +K++ GRGG+I+N+++S++ ME + I+ + DHPDD ++P
Sbjct: 335 ITIENLHVWNSAAGVRIKSDNGRGGYIKNVSISNIRMERVKIPIRFSRGSNDHPDDGWDP 394
Query: 357 NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVS 416
A+P I I +V ++ +++G+K S F G+C NI GVA S C V+
Sbjct: 395 KAVPRFKDILISNVISVNSTKAPVLEGVKGSSFEGLCFKNITFLGVA--LSATWHCEYVA 452
Query: 417 GSAYQVKPWPCSELSSSQQTGAC 439
G V P PC EL ++ T +C
Sbjct: 453 GFTNGVFPLPCPELQNN-GTSSC 474
>gi|108711940|gb|ABF99735.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|218194041|gb|EEC76468.1| hypothetical protein OsI_14200 [Oryza sativa Indica Group]
gi|222626115|gb|EEE60247.1| hypothetical protein OsJ_13254 [Oryza sativa Japonica Group]
Length = 460
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/424 (50%), Positives = 294/424 (69%), Gaps = 5/424 (1%)
Query: 18 FSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLY 77
+S S C + YR ++IT+FG VGDG TLNTKAF+ AI+ + GG L+
Sbjct: 6 WSNVSSTYCKDMASSVYRPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLF 65
Query: 78 VPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFI 137
VP G +LTGSF+L SH+TL L K A I + D+ +WP+I PLPSYGRGRE PG R+ S I
Sbjct: 66 VPAGRWLTGSFSLISHLTLSLDKDAEIIGSPDSSDWPVIDPLPSYGRGRELPGKRHQSLI 125
Query: 138 HGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSP 197
G L DV+ITG NGTIDGQGAIWW+ + TL +TRP+L+E M S ++ISN+ F+NSP
Sbjct: 126 FGTNLTDVIITGANGTIDGQGAIWWDWFHSNTLNYTRPHLVELMYSTDVVISNLTFKNSP 185
Query: 198 FWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWD 257
FWNIHPVYCS V++++VTILAP +SPNTDGIDPDSS+NVCI+ Y+ GDD++ +KSGWD
Sbjct: 186 FWNIHPVYCSQVLVQHVTILAPLNSPNTDGIDPDSSTNVCIDHCYVRNGDDVIVIKSGWD 245
Query: 258 EYGIAYGHPSSGITIRRVTGSSP-FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTN 316
EYGI++ PS+ I+I +TG + +GIA GSE SGG+ V AE + + N GI +KT
Sbjct: 246 EYGISFARPSTNISISNITGETRGGAGIAFGSEMSGGISEVRAEGLRIVNSMHGIRIKTA 305
Query: 317 IGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQ 376
GRGG+++N+ +SDV M+N I+I G+ G+HPDDK++ NALP+++ ITI++V G V
Sbjct: 306 PGRGGYVKNVYISDVSMDNVSMAIRITGNFGEHPDDKYDRNALPMISNITIENVVGVNVG 365
Query: 377 QSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL-SSSQQ 435
+G+++G++ F+ ICLSN++L + + P CS + G + V P C +L + Q
Sbjct: 366 VAGILEGIEGDNFSSICLSNVSL---SVQSMHPWNCSLIEGYSNSVIPESCEQLRTDCGQ 422
Query: 436 TGAC 439
T C
Sbjct: 423 TPIC 426
>gi|357478841|ref|XP_003609706.1| hypothetical protein MTR_4g120730 [Medicago truncatula]
gi|355510761|gb|AES91903.1| hypothetical protein MTR_4g120730 [Medicago truncatula]
Length = 459
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/410 (51%), Positives = 284/410 (69%), Gaps = 3/410 (0%)
Query: 32 MRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLT 91
++ R +SI +FG VGDGKTLNT AF+ AI+ ++ GG LYVPPG +LT SFNLT
Sbjct: 33 LKPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGTWLTQSFNLT 92
Query: 92 SHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGEN 151
SH+TL+L KGAVI +QD +NW ++ PLPSYGRG E PGGRY S I+G LQDVVITG N
Sbjct: 93 SHLTLFLEKGAVIIGSQDHYNWDVLDPLPSYGRGLEVPGGRYQSLINGYMLQDVVITGNN 152
Query: 152 GTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVI 211
GTIDG G+ WW + +L ++RP+L+E + S +++SN+ F N+P +NIHPVYC NV I
Sbjct: 153 GTIDGMGSTWWESFSSHSLNYSRPHLVELVASTDVVVSNLTFLNAPAYNIHPVYCRNVHI 212
Query: 212 RYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGIT 271
++I AP +SP T GI PDSS +VCIED I+TG D +A+KSGWDEYGIAYG P+ +
Sbjct: 213 HNISIFAPPESPYTVGIVPDSSDHVCIEDCTIATGYDAIALKSGWDEYGIAYGRPTENVH 272
Query: 272 IRRVTGSSPF-SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSD 330
IRRV + + S +A GS+ SGG+ NV EH++LYN GI +T GRGG++++I +SD
Sbjct: 273 IRRVHLQASYGSTLAFGSDMSGGISNVFVEHVHLYNSKGGIEFRTIRGRGGYMKDIILSD 332
Query: 331 VYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT 390
+ M+N + I G G HPDDKF+PNALP+++ +D+ GT + +G GL+ SPFT
Sbjct: 333 IEMKNIYRAISATGYCGSHPDDKFDPNALPLLDHFIFQDIIGTNITIAGSFAGLQESPFT 392
Query: 391 GICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSS-SQQTGAC 439
ICLSNI L V +S +CS+VSG + V P PC +L S S + +C
Sbjct: 393 NICLSNITLS-VNYASSTSWECSNVSGFSDSVLPIPCPDLDSPSNYSSSC 441
>gi|356519942|ref|XP_003528627.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 449
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/402 (52%), Positives = 282/402 (70%), Gaps = 2/402 (0%)
Query: 32 MRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLT 91
++ R +SI +FG VGDGKTLNT AF+ AI+ ++ GG LYVPPG +LT SFNLT
Sbjct: 32 LKPRPHTVSILEFGAVGDGKTLNTMAFQNAIFYLKSFADKGGAQLYVPPGTWLTQSFNLT 91
Query: 92 SHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGEN 151
SH+TL+L KGAVI +QD ++W ++ PLPSYGRG E PGGRY S I+G+ L DVVITG N
Sbjct: 92 SHLTLFLEKGAVILGSQDPFHWEVVDPLPSYGRGVEVPGGRYQSLINGNMLHDVVITGNN 151
Query: 152 GTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVI 211
G IDG G WW ++ +L ++RP+LIE + S +++SN+ F N+P ++IHPVYCSNV I
Sbjct: 152 GNIDGMGFAWWELFSSHSLNYSRPHLIELVASDHVVVSNLTFLNAPAYSIHPVYCSNVHI 211
Query: 212 RYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGIT 271
V+I AP +SPNT GI PDSS +VCIED I+TG D +++KSGWDEYGIAYG P+ +
Sbjct: 212 HNVSISAPPESPNTVGIVPDSSDHVCIEDCVIATGYDAISLKSGWDEYGIAYGRPTENVH 271
Query: 272 IRRV-TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSD 330
IRRV +S S IA GS+ SGG+ N+L E+++LYN GI +T GRGG+++ I +SD
Sbjct: 272 IRRVHLQASSGSTIAFGSDMSGGISNILVENVHLYNSKSGIEFRTMRGRGGYMKEIIISD 331
Query: 331 VYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT 390
+ MEN I G G HPDDKF+PNALP+++ I ++D+ GT + +G GL+ SPFT
Sbjct: 332 IEMENIYTAIAATGYCGSHPDDKFDPNALPLLDHIILQDMIGTNITIAGSFAGLQESPFT 391
Query: 391 GICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSS 432
ICLSNI L +S P +CS+VSG + V P PC +L +
Sbjct: 392 NICLSNITLS-TNSVSSIPWECSNVSGFSDYVLPKPCPDLET 432
>gi|224032157|gb|ACN35154.1| unknown [Zea mays]
Length = 430
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 210/428 (49%), Positives = 294/428 (68%), Gaps = 6/428 (1%)
Query: 1 MFRFLVTLSILLSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFRE 60
+F+ L+ + ++ +S S + C + P YR ++IT+FG VGDG TLNTKAF+
Sbjct: 7 LFQVLLVFTAVIEI--QWSTVSSIYCKDMPPNVYRPHSVTITEFGAVGDGVTLNTKAFQN 64
Query: 61 AIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLP 120
AI+ + GG L+VP G +LTGSF+L SH+TL L K A+I + D+ +WP+I PLP
Sbjct: 65 AIFYLNSFADKGGAQLFVPAGRWLTGSFHLISHLTLSLDKDAIIIGSPDSSHWPVIDPLP 124
Query: 121 SYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEF 180
SYGRGR+ PG R+ S I G L DV+ITG NG+IDGQGAIWW + TL +TRP+L+E
Sbjct: 125 SYGRGRDLPGKRHQSLIFGLNLTDVIITGANGSIDGQGAIWWGWFHNHTLNYTRPHLVEL 184
Query: 181 MNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIED 240
M S +++ISN+ F+NSPFWNIHPVYCS V++R+VTILAP +SPNTDG+ PDSS+NVCI
Sbjct: 185 MYSTNVVISNLTFKNSPFWNIHPVYCSQVLVRHVTILAPLNSPNTDGVTPDSSTNVCINH 244
Query: 241 SYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP-FSGIAVGSETSGGVENVLA 299
Y+ G D++ +KSGWDEYGI++ PSS I+I +TG + SGIA GSE SGG+ V A
Sbjct: 245 CYVRNGGDVIVIKSGWDEYGISFAQPSSNISISDITGETRGGSGIAFGSEMSGGISEVRA 304
Query: 300 EHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNAL 359
+ + N GI +KT GRGG++ N+ ++DV M+N I+I G+ G+HPDDK++ AL
Sbjct: 305 VGLRIVNSLHGIRIKTAPGRGGYVENVYIADVSMDNVSMAIRITGNYGEHPDDKYDSTAL 364
Query: 360 PVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSA 419
PV++ ITIKDV G + +G+++G++ F+ ICLSN++L + ++ P CS + G +
Sbjct: 365 PVISNITIKDVVGVNIGVAGILEGIQGDNFSNICLSNVSL---SVQSAHPWNCSLIEGYS 421
Query: 420 YQVKPWPC 427
V P C
Sbjct: 422 NSVIPESC 429
>gi|356516364|ref|XP_003526865.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 477
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/407 (52%), Positives = 296/407 (72%), Gaps = 3/407 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R +SI DFGGVGDGKT NT++FR AI +Q + GG L +P G +LTGSFNLTS+
Sbjct: 71 RKVVLSIEDFGGVGDGKTSNTESFRRAIRYMQRFQNRGGAQLNIPTGTWLTGSFNLTSNF 130
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL+L GAVI A+QD WP+I PLPSYGRGRER GGR++S IHG+G+ +VVITG+NGT+
Sbjct: 131 TLFLHHGAVILASQDPKEWPIIEPLPSYGRGRERLGGRHISLIHGNGISNVVITGQNGTV 190
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQG +WW +W RTL TR +L+E ++S +++ISN+ F+NSPFW IHPVYCSNVV++ +
Sbjct: 191 DGQGRMWWELWWNRTLEHTRGHLLELISSDNVLISNLTFRNSPFWTIHPVYCSNVVVKGM 250
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
TILAP ++PNTDGIDPDSS+NVCIED+YI +GDDLVA+KSGWD YGI HPS+ I +RR
Sbjct: 251 TILAPLNAPNTDGIDPDSSTNVCIEDNYIESGDDLVAIKSGWDHYGITMAHPSTNIIVRR 310
Query: 275 VTGSSP-FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
++G++P SG+ +GSE SGG+ N+ E++++++ G+ +K++ GRGG+I N+++SD+ M
Sbjct: 311 ISGTTPTCSGVGIGSEMSGGISNITIENLHVWDSAAGVRIKSDKGRGGYITNVSISDIRM 370
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
E + I+ + DHPDD ++P A+P I I +V ++ +++G++ S F G+C
Sbjct: 371 ERVKIPIRFSRGSNDHPDDGWDPKAVPRFKDILISNVVSVNSTKAPVLEGVEGSSFEGLC 430
Query: 394 LSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACS 440
NI L GVA S +C VSG A +V P PC EL ++ + CS
Sbjct: 431 FKNITLHGVA--LSARWRCEYVSGFATEVFPVPCPELRNNSYSSWCS 475
>gi|225426168|ref|XP_002278930.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
Length = 480
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 209/397 (52%), Positives = 272/397 (68%), Gaps = 1/397 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R S+TDFGGVGDG T NTKAF+ AI + GG+ L+VPPG +LTGSFNLTSH
Sbjct: 49 RAHSASLTDFGGVGDGTTSNTKAFQAAIDHLSQFASDGGSQLFVPPGRWLTGSFNLTSHF 108
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TLYL K AV+ A+QD WP+I PLPSYGRGR+ GGRY+S I G L DVVITGENGTI
Sbjct: 109 TLYLHKDAVLLASQDEHEWPVIDPLPSYGRGRDTQGGRYISLIFGTNLTDVVITGENGTI 168
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQGA+WW + + L +TRP LIE M+S ++ IS++ NSP WN+HPVY SNV+I+ +
Sbjct: 169 DGQGALWWAKFHKGELKYTRPYLIEIMHSDNVQISSLTLVNSPSWNVHPVYSSNVIIQGL 228
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
TI AP SPNTDGI+PDS +N IED YI +GDD +AVKSGWDEYGIAYG P+ + IRR
Sbjct: 229 TITAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDEYGIAYGMPTKQLVIRR 288
Query: 275 VTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
+T SPFS IA+GSE SGG+E+V AE I + G+ +KT +GRGG++++I V + M
Sbjct: 289 LTCISPFSATIALGSEMSGGIEDVRAEDILAIDTESGVRIKTAVGRGGYVKDIYVRSMIM 348
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
+ + + G+ G H D+ ++PNALP + GI +D+ V +G ++G+ PFTGIC
Sbjct: 349 KTMKWAFWMTGNYGSHADNNYDPNALPAIQGINYRDMVAENVTMAGRLEGISGDPFTGIC 408
Query: 394 LSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 430
+SN+ + P C+D++G V P PC L
Sbjct: 409 ISNVTIGLAKKAKKAPWTCTDIAGITSGVVPQPCDLL 445
>gi|224130360|ref|XP_002328589.1| predicted protein [Populus trichocarpa]
gi|222838571|gb|EEE76936.1| predicted protein [Populus trichocarpa]
Length = 450
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 208/403 (51%), Positives = 282/403 (69%), Gaps = 3/403 (0%)
Query: 32 MRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLT 91
++ R +SI +FG VGDGKTLNT AF+ AI+ ++ GG LYVPPG +LTGSF+LT
Sbjct: 34 LKPRPHSVSILEFGAVGDGKTLNTLAFQNAIFYLKSFTDKGGAQLYVPPGKWLTGSFSLT 93
Query: 92 SHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGEN 151
SH+TL++ KGAVI +QD +W L+ PLPSYGRG E PG RY S I+GD L DVV+TG+N
Sbjct: 94 SHLTLFVEKGAVILGSQDPSHWDLVDPLPSYGRGIELPGKRYQSLINGDMLHDVVVTGDN 153
Query: 152 GTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVI 211
GTIDGQG++WW+ + +L ++RP+L+EF +S +++SN+ F N+P ++IHPVYCSNVV+
Sbjct: 154 GTIDGQGSVWWDWFESHSLNYSRPHLVEFTSSDYVVVSNLTFLNAPAYSIHPVYCSNVVV 213
Query: 212 RYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGIT 271
+ +++ AP +SP T GI PDSS+NVCIEDS I G D +++KSGWDEYGIAY P++ +
Sbjct: 214 QNISVSAPGESPYTIGIVPDSSNNVCIEDSRIEVGYDAISLKSGWDEYGIAYDRPTTDVY 273
Query: 272 IRRV-TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSD 330
IRRV SS S +A GSE SGG+ NV E +++YN GI +T GRGG+I+ I +SD
Sbjct: 274 IRRVYLQSSSGSSVAFGSEMSGGISNVHVEQVHIYNSFSGIEFRTTKGRGGYIKRIIISD 333
Query: 331 VYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT 390
V ++N GD G HPDD F+PNA+PV++ IT++ V G+ + +G GL SPFT
Sbjct: 334 VELKNTNTAFGAIGDCGSHPDDNFDPNAIPVLDQITLQGVIGSNITMAGNFTGLAESPFT 393
Query: 391 GICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSS 433
+CL N++L T P CS+V G + V P PC EL SS
Sbjct: 394 SLCLFNVSL--AIRNTLSPWTCSNVVGFSESVSPEPCPELESS 434
>gi|224107034|ref|XP_002314352.1| predicted protein [Populus trichocarpa]
gi|222863392|gb|EEF00523.1| predicted protein [Populus trichocarpa]
Length = 435
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 211/403 (52%), Positives = 283/403 (70%), Gaps = 3/403 (0%)
Query: 32 MRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLT 91
++ R +SI +FG VGDGKTLNT AF+ AI+ ++ GG LYVPPG +LTGSF+LT
Sbjct: 32 LKPRPHSVSILEFGAVGDGKTLNTLAFQNAIFYLKSFTDKGGAQLYVPPGKWLTGSFSLT 91
Query: 92 SHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGEN 151
SH+TL+L KGAVI +QD +W L+ PLPSYGRG E PG RY S I+GD L DVV+TG+N
Sbjct: 92 SHLTLFLEKGAVILGSQDPSHWDLVDPLPSYGRGIELPGKRYRSLINGDMLTDVVVTGDN 151
Query: 152 GTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVI 211
GTIDGQG++WW+ + +L ++RP+L+EF +S +++SN+ F N+P +NIHPVYCSNV++
Sbjct: 152 GTIDGQGSVWWDWFESHSLNYSRPHLVEFTSSDLVVVSNLTFLNAPAYNIHPVYCSNVLV 211
Query: 212 RYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGIT 271
+ +++ AP +SP T GI PDSS+NVCIEDS I G D +++KSGWDEYGIAY P+ +
Sbjct: 212 QNISVSAPGESPYTIGIVPDSSNNVCIEDSLIKVGYDAISLKSGWDEYGIAYDRPTQDVH 271
Query: 272 IRRV-TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSD 330
IRRV SS S IA GSE SGG+ NV E + LYN GI +T GRGG+I+ I +S+
Sbjct: 272 IRRVYLQSSSGSSIAFGSEMSGGISNVYVEQVYLYNSFSGIEFRTTKGRGGYIKRIIISN 331
Query: 331 VYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT 390
V ++N GD G HPDD F+PNA+P+++ IT+++V G+ + +G GL SPFT
Sbjct: 332 VELKNINMAFGAIGDCGSHPDDSFDPNAIPILDQITLQNVTGSNITMAGNFTGLAESPFT 391
Query: 391 GICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSS 433
ICL N++L A TS CS+V G + V P PC EL+SS
Sbjct: 392 SICLFNVSLTIPA--TSTSWTCSNVIGFSEFVSPEPCPELNSS 432
>gi|449531087|ref|XP_004172519.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like,
partial [Cucumis sativus]
Length = 452
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/408 (52%), Positives = 285/408 (69%), Gaps = 2/408 (0%)
Query: 26 CSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLT 85
C + R +SI +FG VGDGKTLNT AF+ AI+ ++ GG LYVPPG +LT
Sbjct: 24 CDSKPTLDPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLT 83
Query: 86 GSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDV 145
GS NLTSH+TL+L KGAVI +QD +W L+ PLPSYGRG E PG RY S I+G LQDV
Sbjct: 84 GSINLTSHLTLFLXKGAVILGSQDPSHWELVNPLPSYGRGIEVPGKRYRSLINGYNLQDV 143
Query: 146 VITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVY 205
VITG++G IDGQG +WWN + +L ++RP+L+EF +S+ +++SN+ F N+P +NIHPVY
Sbjct: 144 VITGDDGVIDGQGLVWWNWFSSHSLNYSRPHLVEFEDSQYVVVSNLTFLNTPAYNIHPVY 203
Query: 206 CSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH 265
CSNV + +++ AP++SP T GI PDSS +VCIE I+TG D +A+KSGWD+YGIAYG
Sbjct: 204 CSNVYVYNISVSAPSESPYTVGIVPDSSDHVCIEGCNIATGYDAIALKSGWDQYGIAYGR 263
Query: 266 PSSGITIRRV-TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 324
PS I IRRV SS S IA GSE SGG+ NVL EH+ L N +GI ++T GRGG+I+
Sbjct: 264 PSKNIHIRRVHLQSSSGSSIAFGSEMSGGISNVLVEHVQLNNSFIGIQIRTTKGRGGYIK 323
Query: 325 NITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGL 384
I VSDV MEN +G G HPDD+++PNALP+V IT+++V GT ++ +G G+
Sbjct: 324 GIVVSDVEMENISTAFSASGHFGSHPDDEYDPNALPIVQDITLQNVRGTNIKIAGNFSGI 383
Query: 385 KNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSS 432
+ SPFT I LSNI + ++ + CSDVSG + V P PCS+LS+
Sbjct: 384 QESPFTSIYLSNITFSINSSSSTSWI-CSDVSGFSESVIPPPCSDLST 430
>gi|224071986|ref|XP_002303605.1| predicted protein [Populus trichocarpa]
gi|222841037|gb|EEE78584.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 217/431 (50%), Positives = 286/431 (66%), Gaps = 12/431 (2%)
Query: 13 SYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSG 72
S ++CF A+V +C R S++DFGGVGDG T+NT+AF+ AI + G
Sbjct: 27 SKWDCFEYAAV-SC--------RAHSASVSDFGGVGDGTTVNTEAFQAAIDHLSQFSSEG 77
Query: 73 GTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGR 132
G+LLYVPPG +LTGSFNLTS+ TLYL K AV+ A+QD +PLI PLPSYGRGR+ G R
Sbjct: 78 GSLLYVPPGRWLTGSFNLTSYFTLYLDKDAVLLASQDESEYPLIEPLPSYGRGRDADGAR 137
Query: 133 YMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVI 192
Y S I G+ L DV+ITG NGTIDGQG +WW +R L TRP LIE M S +I ISN+
Sbjct: 138 YSSLIFGNNLTDVIITGANGTIDGQGELWWTKFRAGELNHTRPYLIEIMFSTNIQISNLT 197
Query: 193 FQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAV 252
NSP WN+HPVYCSNVV++ +TILAP SPNTDGI+PDS +N I+D YI +GDD VAV
Sbjct: 198 LINSPSWNVHPVYCSNVVVQGLTILAPVRSPNTDGINPDSCTNTKIQDCYIVSGDDCVAV 257
Query: 253 KSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGI 311
KSGWDEYGIA+G P+ + IRR+T SP S IA+GSE SGG+E+V AE I + G+
Sbjct: 258 KSGWDEYGIAFGMPTKQVVIRRLTCISPTSAVIALGSEMSGGIEDVRAEDITAIDSESGV 317
Query: 312 HVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVW 371
+KT +GRGG++++I V + ++ + + G+ G HPD+ ++PNA+PV+ I +DV
Sbjct: 318 RIKTAVGRGGYVKDIYVRGMTLKTMKWVFWMTGNYGSHPDNNYDPNAIPVIQNINYRDVV 377
Query: 372 GTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELS 431
V + ++G+ PFTGIC+SN+ + CSDV+G +V P PC LS
Sbjct: 378 AENVTMAARLEGIAGDPFTGICISNVTIGLARNRKKLQWNCSDVAGITSEVTPKPCDLLS 437
Query: 432 SS--QQTGACS 440
+ GAC+
Sbjct: 438 DQGPGKIGACN 448
>gi|302809176|ref|XP_002986281.1| hypothetical protein SELMODRAFT_124011 [Selaginella moellendorffii]
gi|300145817|gb|EFJ12490.1| hypothetical protein SELMODRAFT_124011 [Selaginella moellendorffii]
Length = 445
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 203/395 (51%), Positives = 286/395 (72%), Gaps = 2/395 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R +SIT+FG VGDG+T+NT AF+ A++ +Q GG LYVP G +LTGSF L SH+
Sbjct: 32 RPHSVSITEFGAVGDGQTVNTVAFQNAVFYLQSFAHKGGAQLYVPAGRWLTGSFTLISHL 91
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL+L G+VI A+QD +WPLI PLPSYGRGR+ PG R+ S ++G ++DVVITG NGTI
Sbjct: 92 TLFLDTGSVILASQDPHDWPLIDPLPSYGRGRDLPGRRHRSLVYGKDVEDVVITGGNGTI 151
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQG++WW+ +R ++L +TR +L+EF+NS++I++SN+ NSP W IHPVYCSNVVIR V
Sbjct: 152 DGQGSVWWHWFRNQSLNYTRGHLVEFINSKNIVVSNISLLNSPSWTIHPVYCSNVVIRGV 211
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
T++AP++SPNTDG+ PDS + VCIED I++G D V+VKSGWDEYGI G PS+ + IRR
Sbjct: 212 TVVAPSESPNTDGVQPDSCTGVCIEDCAITSGGDAVSVKSGWDEYGIQVGLPSAKVVIRR 271
Query: 275 VT-GSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
+T + + IA GSE SGG++NV+ E + ++N +G+HVKT GRGG+++NI+V++V M
Sbjct: 272 ITAQAPASAAIAFGSEMSGGIKNVVVEDVRVFNSKIGVHVKTGAGRGGYVKNISVTNVTM 331
Query: 334 ENARKGIKIAGD-VGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGI 392
++ I ++G+ +HPD+ ++P A PVV GI + VWG + +G ++GL+ +PF I
Sbjct: 332 DSVLTAIALSGNSSSEHPDEGYDPLAYPVVRGIYVNKVWGRNISHAGSLRGLEAAPFEDI 391
Query: 393 CLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPC 427
CLSNI L+ CS+V G++ V P PC
Sbjct: 392 CLSNITLEVDEASQGSKWDCSNVKGASLGVTPTPC 426
>gi|302814173|ref|XP_002988771.1| hypothetical protein SELMODRAFT_128450 [Selaginella moellendorffii]
gi|300143592|gb|EFJ10282.1| hypothetical protein SELMODRAFT_128450 [Selaginella moellendorffii]
Length = 445
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 204/395 (51%), Positives = 286/395 (72%), Gaps = 2/395 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R +SIT+FG VGDG+T+NT AF+ A++ +Q GG LYVP G +LTGSF L SH+
Sbjct: 32 RPHSVSITEFGAVGDGQTVNTVAFQNAVFYLQSFAHKGGAQLYVPAGRWLTGSFTLISHL 91
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL+L G+VI A+QD +WPLI PLPSYGRGR+ PG R+ S ++G L+DVVITG NGTI
Sbjct: 92 TLFLDTGSVILASQDPHDWPLIDPLPSYGRGRDLPGRRHRSLVYGKDLEDVVITGGNGTI 151
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQG++WW+ +R ++L +TR +L+EF+NS++I++SN+ NSP W IHPVYCSNVVIR V
Sbjct: 152 DGQGSVWWHWFRNQSLNYTRGHLVEFINSKNIVVSNISLLNSPSWTIHPVYCSNVVIRGV 211
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
T++AP++SPNTDG+ PDS + VCIED I++G D V+VKSGWDEYGI G PS+ + IRR
Sbjct: 212 TVVAPSESPNTDGVQPDSCTGVCIEDCAITSGGDAVSVKSGWDEYGIRVGLPSAKVVIRR 271
Query: 275 VT-GSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
+T + + IA GSE SGG++NV+ E + ++N +G+HVKT GRGG+++NI+V++V M
Sbjct: 272 ITAQAPASAAIAFGSEMSGGIKNVVVEDVRVFNSKIGVHVKTGAGRGGYVKNISVTNVTM 331
Query: 334 ENARKGIKIAGD-VGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGI 392
++ I ++G+ +HPD+ ++P A PVV GI + VWG + +G ++GL+ +PF I
Sbjct: 332 DSVLTAIALSGNSSSEHPDEGYDPLAYPVVRGIYVNKVWGRNISHAGSLRGLEAAPFEDI 391
Query: 393 CLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPC 427
CLSNI L+ CS+V G++ V P PC
Sbjct: 392 CLSNITLEVDDASQGSKWDCSNVKGASLGVTPTPC 426
>gi|326524051|dbj|BAJ97036.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 482
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 210/392 (53%), Positives = 279/392 (71%), Gaps = 3/392 (0%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
S+ +FG VGDG T NT AF+ A+ ++ GG L VP G +LTGSFNLTS TL+L
Sbjct: 80 SVEEFGAVGDGVTSNTAAFQRAVAALEERGGGGGARLEVPAGRWLTGSFNLTSRFTLFLH 139
Query: 100 KGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGA 159
GAVI +QD WPLIAPLPSYGRGRER G R++S IHG L DVVITG NGTIDGQG
Sbjct: 140 HGAVILGSQDPEEWPLIAPLPSYGRGRERLGPRHISLIHGQDLNDVVITGSNGTIDGQGR 199
Query: 160 IWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP 219
+WW +W RTL TR +LIE +NS +++ISNV +NSPFW +HPVYC NVVI+ +TILAP
Sbjct: 200 MWWELWWNRTLNHTRGHLIELVNSTNVLISNVTLRNSPFWTVHPVYCRNVVIKDLTILAP 259
Query: 220 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS 279
++PNTDGIDPDSSS VCIED YI +GDDLVAVKSGWD+YGI+ G PSS I I+RV+G++
Sbjct: 260 LNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQRVSGTT 319
Query: 280 P-FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK 338
P SG+ GSE SGG+ NVL ++++N + +KT++GRGG+I NIT+++V ME +
Sbjct: 320 PTCSGVGFGSEMSGGISNVLVRDLHIWNSASAVRLKTDVGRGGYITNITIANVTMEKVKV 379
Query: 339 GIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNIN 398
I+ + DH DDK++ ALP+++GI I D+ G VQ++ +++ + + + GIC N++
Sbjct: 380 PIRFSRGSDDHSDDKYDRTALPMISGIHIVDIVGVDVQRAPMLEAVHGAVYEGICFRNVS 439
Query: 399 LQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 430
L+ + +C V G A++V P PC EL
Sbjct: 440 LRAIRRQVR--WQCESVYGEAHEVFPAPCEEL 469
>gi|449432886|ref|XP_004134229.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 457
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/408 (52%), Positives = 285/408 (69%), Gaps = 2/408 (0%)
Query: 26 CSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLT 85
C + R +SI +FG VGDGKTLNT AF+ AI+ ++ GG LYVPPG +LT
Sbjct: 29 CDSKPTLDPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLT 88
Query: 86 GSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDV 145
GS NLTSH+TL+L KGAVI +QD +W L+ PLPSYGRG E PG RY S I+G LQDV
Sbjct: 89 GSINLTSHLTLFLEKGAVILGSQDPSHWELVNPLPSYGRGIEVPGKRYRSLINGYNLQDV 148
Query: 146 VITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVY 205
VITG++G IDGQG +WWN + +L ++RP+L+EF +S+ +++SN+ F N+P +NIHPVY
Sbjct: 149 VITGDDGVIDGQGLVWWNWFSSHSLNYSRPHLVEFEDSQYVVVSNLTFLNTPAYNIHPVY 208
Query: 206 CSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH 265
CSNV + +++ AP++SP T GI PDSS +VCIE I+TG D +A+KSGWD+YGIAYG
Sbjct: 209 CSNVYVYNISVSAPSESPYTVGIVPDSSDHVCIEGCNIATGYDAIALKSGWDQYGIAYGR 268
Query: 266 PSSGITIRRV-TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 324
PS I IRRV SS S IA GSE SGG+ NVL EH+ L N +GI ++T GRGG+I+
Sbjct: 269 PSKNIHIRRVHLQSSSGSSIAFGSEMSGGISNVLVEHVQLNNSFIGIQIRTTKGRGGYIK 328
Query: 325 NITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGL 384
I VSDV MEN +G G HPDD+++PNALP+V IT+++V GT ++ +G G+
Sbjct: 329 GIVVSDVEMENISTAFSASGHFGSHPDDEYDPNALPIVQDITLQNVRGTNIKIAGNFSGI 388
Query: 385 KNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSS 432
+ SPFT I LSNI + ++ + CSDVSG + V P PCS+LS+
Sbjct: 389 QESPFTSIYLSNITFSINSSSSTSWI-CSDVSGFSESVIPPPCSDLST 435
>gi|356558153|ref|XP_003547372.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 579
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 214/399 (53%), Positives = 278/399 (69%), Gaps = 6/399 (1%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R +SI +FG VGDGKTLNT AF+ AI+ ++ GG LYVPPG +LTGSFNLTSH+
Sbjct: 160 RPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLTGSFNLTSHL 219
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL+L KGAVI TQD +W ++ PLPSYGRG E PGGRY S I+G L DVV+TG NGTI
Sbjct: 220 TLFLEKGAVIIGTQDPSHWDVVEPLPSYGRGLEVPGGRYQSLINGYMLHDVVVTGNNGTI 279
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DG G +WW+ + +L +RP+L+E + S +++SN+ F N+P ++IHPVYCS+V I+ V
Sbjct: 280 DGMGMVWWDWYSTHSLNHSRPHLVEIVASDYVVVSNLTFLNAPAYSIHPVYCSHVHIQNV 339
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
+I P +SP T GI PDSS NVCIED ++ G D +++KSGWDEYGIAYG P+ + IRR
Sbjct: 340 SISTPPESPYTVGIVPDSSDNVCIEDCIVAMGFDAISLKSGWDEYGIAYGRPTENVHIRR 399
Query: 275 VTGSSPFSG--IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVY 332
V + FSG +A GS+ SGG+ NVL EH +L+N GI +T GRGG+++ I +SD+
Sbjct: 400 VHLHA-FSGSALAFGSDMSGGISNVLVEHAHLFNSKSGIEFRTTKGRGGYMKEIVMSDIQ 458
Query: 333 MENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGI 392
MEN I G+ G HPDDKF+PNALP ++ IT+KDV GT + +G I G++ SPFT I
Sbjct: 459 MENVHTAIAATGNCGSHPDDKFDPNALPHLDHITLKDVTGTNISIAGNIAGIEESPFTNI 518
Query: 393 CLSNINLQGVAGPTSP-PLKCSDVSGSAYQVKPWPCSEL 430
CLSNI L SP +CS+VSG + V P PC EL
Sbjct: 519 CLSNITLS--TNSVSPITWECSNVSGFSDSVLPEPCPEL 555
>gi|356568425|ref|XP_003552411.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 484
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 212/441 (48%), Positives = 281/441 (63%), Gaps = 5/441 (1%)
Query: 4 FLVTLSILLSYFNCFSLASVVTCSGIV--PMRYRNDKISITDFGGVGDGKTLNTKAFREA 61
F + L LLS S + V + + + R ++TDFGGVGDGKT NTKAF+ A
Sbjct: 18 FAILLVALLSSERVESRKAKVVTTSLEYNAINCRAHSAALTDFGGVGDGKTSNTKAFQSA 77
Query: 62 IYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPS 121
I + GG+ LYVP G +LTGSF+LTSH TLYL K AV+ A+QD WP++ PLPS
Sbjct: 78 ISHLSQYASEGGSQLYVPAGKWLTGSFSLTSHFTLYLDKDAVLLASQDITEWPVLEPLPS 137
Query: 122 YGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFM 181
YGRGR+ P GR+ S I G L DV++TGENGTIDGQG WW + ++ L +TRP LIE M
Sbjct: 138 YGRGRDAPAGRFTSLIFGTNLTDVIVTGENGTIDGQGEFWWQQFHRKKLKYTRPYLIELM 197
Query: 182 NSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDS 241
S +I ISN+ NSP WN+HPVY SN++++ +TI AP SPNTDGI+PDS +NV IED
Sbjct: 198 FSDNIQISNLTLLNSPSWNVHPVYSSNIIVQGITIYAPVTSPNTDGINPDSCTNVRIEDC 257
Query: 242 YISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAE 300
YI +GDD VAVKSGWDEYGI +G P+ + IRR+T SP+S IA+GSE SGG+++V AE
Sbjct: 258 YIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAE 317
Query: 301 HINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALP 360
I G+ +KT +GRGG++++I V + + + K+ GD H D ++PNALP
Sbjct: 318 DITAIQTESGVRIKTAVGRGGYVKDIYVKRMTLHTMKWAFKMTGDYNSHADGHYDPNALP 377
Query: 361 VVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY 420
+ I +DV V + QG+ N PFTGIC++N+ L+ A P C+D+ G
Sbjct: 378 EIKNINYRDVVAENVTIAARFQGISNDPFTGICIANVTLRMAAKAKKQPWTCTDIEGMTS 437
Query: 421 QVKPWPCSELSSS--QQTGAC 439
V P PC L ++ AC
Sbjct: 438 GVTPPPCGLLPDQGPEKITAC 458
>gi|255537567|ref|XP_002509850.1| polygalacturonase, putative [Ricinus communis]
gi|223549749|gb|EEF51237.1| polygalacturonase, putative [Ricinus communis]
Length = 480
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 211/428 (49%), Positives = 281/428 (65%), Gaps = 10/428 (2%)
Query: 17 CFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLL 76
CF A++ +C R + S+ DFGGVGDG+T NTKAF+ AI + GG+ L
Sbjct: 40 CFEYAAI-SC--------RAHEASLEDFGGVGDGQTSNTKAFQAAIDHLSQFSYDGGSQL 90
Query: 77 YVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSF 136
YVPPG +LTGSFNLTSH TL+L K AV+ A+QD WP+I PLPSYGRGR+ GGRY S
Sbjct: 91 YVPPGKWLTGSFNLTSHFTLFLDKDAVLLASQDESEWPVIEPLPSYGRGRDTEGGRYSSL 150
Query: 137 IHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNS 196
I G L DVVITG NGTIDGQG +WW + + +TRP LIE M S +I ISN+ NS
Sbjct: 151 IFGTNLTDVVITGANGTIDGQGDLWWKKFHNGEINYTRPYLIEIMYSNNIQISNLTLMNS 210
Query: 197 PFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGW 256
P WNIHP Y SNVV++ +TILAP +SPNTDGI+PDS +N IED YI +GDD VAVKSGW
Sbjct: 211 PSWNIHPTYSSNVVVQGITILAPVNSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGW 270
Query: 257 DEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKT 315
DEYGI++G P+ + IRR+T SP S IA+GSE SGG+++V AE I N G+ +KT
Sbjct: 271 DEYGISFGMPTKQLVIRRLTCISPTSAAIALGSEMSGGIQDVRAEDITCINTESGVRIKT 330
Query: 316 NIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKV 375
++GRGG++++I V + M + + G+ G HPD+ ++PNA+PV+ I +D+ V
Sbjct: 331 SVGRGGYVKDIYVRKMTMHTMKWVFWMTGNYGSHPDNNYDPNAIPVIENINYRDIVAENV 390
Query: 376 QQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQ 435
+ ++G+ PFTGIC+SN+ + P C+D++G + V P PCS L ++
Sbjct: 391 TMAARLEGIAGDPFTGICISNVTIGLAQKPKKLQWNCTDIAGISSGVTPKPCSLLPEQEK 450
Query: 436 TGACSNHF 443
+F
Sbjct: 451 EKIADCNF 458
>gi|356529330|ref|XP_003533248.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 452
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 214/409 (52%), Positives = 281/409 (68%), Gaps = 6/409 (1%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R +SI +FG VGDGKTLNT AF+ AI+ ++ GG LYVPPG +LTGSFNLTSH+
Sbjct: 33 RPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLTGSFNLTSHL 92
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL+L KGAV+ TQD +W ++ PLPSYGRG E PGGRY S I+G L DVV+TG NGTI
Sbjct: 93 TLFLEKGAVLIGTQDPSHWDVVEPLPSYGRGLEVPGGRYQSLINGYMLHDVVVTGNNGTI 152
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DG G +WW+ + +L +RP+L+EF+ S +++SN+ F N+P ++IHPVYCS+V I+ V
Sbjct: 153 DGMGMVWWDWYSTHSLNHSRPHLVEFVASDYVVVSNLTFLNAPAYSIHPVYCSHVHIQNV 212
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
+I P +SP T GI PDSS NVCIED ++ G D +++KSGWDEYGIAYG P+ + IRR
Sbjct: 213 SISTPPESPYTVGIVPDSSDNVCIEDCIVAMGFDAISLKSGWDEYGIAYGRPTENVHIRR 272
Query: 275 VTGSSPFSG--IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVY 332
V + FSG +A GS+ SGG+ NVL EH +L+N GI +T GRGG+++ I +SD+
Sbjct: 273 VQLHA-FSGSALAFGSDMSGGISNVLVEHAHLFNSNSGIEFRTTKGRGGYMKEIVMSDIQ 331
Query: 333 MENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGI 392
MEN I G+ G HPDDKF+PNALP ++ IT+KDV GT + +G + G+ SPFT I
Sbjct: 332 MENVHTAIAATGNCGSHPDDKFDPNALPHLDHITLKDVIGTNITIAGNLAGIDESPFTNI 391
Query: 393 CLSNINLQGVAGPTSP-PLKCSDVSGSAYQVKPWPCSELSSSQQTGACS 440
CLSNI L SP CS+VSG + V P PC EL ++ + S
Sbjct: 392 CLSNITLS--TNSVSPITWACSNVSGFSDSVLPEPCPELGNTSYDSSSS 438
>gi|356530050|ref|XP_003533597.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 484
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 205/408 (50%), Positives = 268/408 (65%), Gaps = 3/408 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R S+TDFGGVGDGK NTKAF+ AI + GG+ LYVP G +LTGSF+LTSH
Sbjct: 51 RAHSASLTDFGGVGDGKASNTKAFQSAISHLSQYASEGGSQLYVPAGKWLTGSFSLTSHF 110
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TLYL K AV+ A+QD WP++ PLPSYGRGR+ P GR+ S I G L DV++TGENGTI
Sbjct: 111 TLYLDKDAVLLASQDITEWPVLEPLPSYGRGRDAPAGRFTSLIFGTNLTDVIVTGENGTI 170
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQG WW + ++ L +TRP LIE M S +I ISN+ NSP WN+HPVY SN++++ +
Sbjct: 171 DGQGEFWWQQFHRKKLKYTRPYLIELMFSDNIQISNLTLLNSPSWNVHPVYSSNIIVQGI 230
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
TI AP SPNTDGI+PDS +NV IED YI +GDD VAVKSGWDEYGI +G P+ + IRR
Sbjct: 231 TIFAPVTSPNTDGINPDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLMIRR 290
Query: 275 VTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
+T SP+S IA+GSE SGG+++V AE I G+ +KT +GRGG++++I V + +
Sbjct: 291 LTCISPYSATIALGSEMSGGIQDVRAEDITAIQTESGVRIKTAVGRGGYVKDIYVKRMTL 350
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
+ K+ GD H D ++PNALP + I +DV V + QG+ N PFTGIC
Sbjct: 351 HTMKWAFKMTGDYNSHADSHYDPNALPEIKNINYRDVVAENVTIAARFQGISNDPFTGIC 410
Query: 394 LSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSS--QQTGAC 439
++N+ L+ A P C+D+ G V P PC L ++ AC
Sbjct: 411 IANVTLRMAAKAKKQPWTCTDIEGMTSGVTPPPCGLLPDQGPEKITAC 458
>gi|22329119|ref|NP_195070.2| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|27754320|gb|AAO22613.1| putative polygalacturonase [Arabidopsis thaliana]
gi|28393881|gb|AAO42348.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332660825|gb|AEE86225.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 475
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/421 (53%), Positives = 296/421 (70%), Gaps = 6/421 (1%)
Query: 24 VTCSGIVPMRYRNDKI--SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPG 81
VTCSG ++I SITDFGGVGDGKT NT AFR A+ ++ GG L VP G
Sbjct: 55 VTCSGFFNHDPFPNRIVMSITDFGGVGDGKTSNTAAFRRAVRHLEGFAAEGGAQLNVPEG 114
Query: 82 VYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDG 141
+L+GSFNLTS+ TL+L +GA+I ++D WP+I PLPSYGRGRERPGGR++S IHGD
Sbjct: 115 TWLSGSFNLTSNFTLFLERGALILGSKDLDEWPIIEPLPSYGRGRERPGGRHISLIHGDN 174
Query: 142 LQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 201
L +VVITGENGTIDGQG +WW +W RTL TR +LIE NS +I+ISN+ NSPFW I
Sbjct: 175 LTNVVITGENGTIDGQGKMWWELWWNRTLVHTRGHLIELKNSHNILISNLTLLNSPFWTI 234
Query: 202 HPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 261
HPVYCSNVVIR +TILAP ++PNTDGIDPDSS+NVCIED YI +GDDLVAVKSGWD+YG+
Sbjct: 235 HPVYCSNVVIRNMTILAPMNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGM 294
Query: 262 AYGHPSSGITIRRVTGSS-PFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 320
A PSS I IRR++G++ SG+ +GSE SGG+ N+ E I++++ G+ +KT+ GRG
Sbjct: 295 AVARPSSNIVIRRISGTTRTCSGVGIGSEMSGGIFNITVEDIHVWDSAAGLRIKTDKGRG 354
Query: 321 GFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL 380
G+I NIT ++V +E + I+ + DH DDK++P ALP V GI I +V +++ +
Sbjct: 355 GYISNITFNNVLLEKVKVPIRFSSGSNDHSDDKWDPKALPRVKGIYISNVVSLNSRKAPM 414
Query: 381 IQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGA-C 439
+ G++ + F +CL N+ L G+ P + KC DVSG A V P C +L + + A C
Sbjct: 415 LLGVEGTSFQDVCLRNVTLLGL--PKTEKWKCKDVSGYASDVFPLSCPQLLQKKGSIAQC 472
Query: 440 S 440
S
Sbjct: 473 S 473
>gi|297802658|ref|XP_002869213.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297315049|gb|EFH45472.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 475
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/420 (53%), Positives = 297/420 (70%), Gaps = 7/420 (1%)
Query: 24 VTCSGIVPMR-YRNDKI-SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPG 81
VTCSG + N K+ SITDFGGVGDGKT NT+AFR A+ ++ GG L VP G
Sbjct: 55 VTCSGFFNHDPFPNRKVMSITDFGGVGDGKTSNTEAFRRAVRHLEGFAAEGGAQLNVPMG 114
Query: 82 VYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDG 141
+L+GSFNLTS+ TL+L +GAVI ++D WP++ PLPSYGRGRERPGGR++S IHGD
Sbjct: 115 TWLSGSFNLTSNFTLFLQRGAVILGSKDLDEWPIVEPLPSYGRGRERPGGRHISLIHGDN 174
Query: 142 LQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 201
L +VVITGENGTIDGQG +WW +W RTL TR +LIE N +I+ISN+ NSPFW I
Sbjct: 175 LTNVVITGENGTIDGQGKMWWELWWNRTLVHTRGHLIELKNCHNILISNLTLLNSPFWTI 234
Query: 202 HPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 261
HPVYCSNVVIR +TILAP ++PNTDGIDPDSS+NVCIED YI +GDDL+AVKSGWD+YG+
Sbjct: 235 HPVYCSNVVIRNMTILAPINAPNTDGIDPDSSTNVCIEDCYIESGDDLIAVKSGWDQYGM 294
Query: 262 AYGHPSSGITIRRVTGSS-PFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 320
A PSS I IRR++G++ SG+ +GSE SGG+ N+ E I++++ G+ +KT+ GRG
Sbjct: 295 AVARPSSNIVIRRISGTTRTCSGVGIGSEMSGGIFNITVEDIHVWDSAAGLRIKTDKGRG 354
Query: 321 GFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL 380
G+I NIT ++V +E + I+ + DH DDK++P ALP V GI I +V +++ +
Sbjct: 355 GYISNITFNNVLLEKVKVPIRFSSGSNDHSDDKWDPKALPRVKGIYISNVVSLNSRKAPM 414
Query: 381 IQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACS 440
+ G++ + F +CL N+ L G+ P + KC DVSG A V P C +L Q+ G+ S
Sbjct: 415 LLGVEGTSFQDVCLRNVTLLGL--PQTEKWKCKDVSGYASDVFPLSCPQL--LQKKGSIS 470
>gi|356564613|ref|XP_003550546.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 460
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/403 (51%), Positives = 282/403 (69%), Gaps = 4/403 (0%)
Query: 32 MRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLT 91
++ R +SI +FG VGDGKTLNT AF+ AI+ ++ GG LYVPPG +LT SFNLT
Sbjct: 43 LKPRPHTVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGTWLTQSFNLT 102
Query: 92 SHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGEN 151
SH+TL+L KGAVI +QD ++W ++ PLPSYGRG E PGGRY S ++G L DVVITG N
Sbjct: 103 SHLTLFLEKGAVILGSQDPFHWEVVDPLPSYGRGVEVPGGRYQSLVNGYMLHDVVITGNN 162
Query: 152 GTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVI 211
G IDG G WW ++ +L ++RP+LIE + S +++SN+ F N+P ++IHPVYCSNV I
Sbjct: 163 GIIDGMGLGWWELFSSHSLNYSRPHLIELVASNRVVVSNLTFLNAPAYSIHPVYCSNVHI 222
Query: 212 RYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGIT 271
V+I AP +SP T GI PDSS +VCIED I+TG D +++KSGWDEYGIAYG P+ +
Sbjct: 223 HNVSISAPQESPYTIGIVPDSSDHVCIEDCVIATGYDAISLKSGWDEYGIAYGRPTENVH 282
Query: 272 IRRVTGSSPFSG--IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVS 329
IRRV + +SG IA GS+ SGG+ N+L E+++LYN GI +T GRGG+++ I +S
Sbjct: 283 IRRVHLQA-YSGSTIAFGSDMSGGISNILVENVHLYNSKSGIEFRTMRGRGGYMKEIIIS 341
Query: 330 DVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPF 389
D+ MEN + G G HPDDKF+PNALP+++ I ++D+ GT + +G GL+ SPF
Sbjct: 342 DIEMENIYTAMAATGYCGSHPDDKFDPNALPLLDHIILQDMIGTNITIAGSFAGLQESPF 401
Query: 390 TGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSS 432
T ICLSN+ L + +S P +CS+VSG + V P PC +L +
Sbjct: 402 TNICLSNVTLS-INSVSSIPWECSNVSGFSDSVLPKPCPDLET 443
>gi|449459262|ref|XP_004147365.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 472
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/404 (52%), Positives = 294/404 (72%), Gaps = 3/404 (0%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+SITDFGGVGDGKT NT+AFR+AI ++ GG+ L VP G ++TGSFNLTS+ TL+L
Sbjct: 70 MSITDFGGVGDGKTSNTEAFRKAIQYMRRFGDKGGSKLTVPKGSWVTGSFNLTSNFTLFL 129
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
+GA+I A+QD WP+I PLPSYGRGRER GGR++S IHG+ L +VVITGENGTIDGQG
Sbjct: 130 QRGALILASQDPDEWPIIEPLPSYGRGRERLGGRHISLIHGNALSNVVITGENGTIDGQG 189
Query: 159 AIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILA 218
+WW +W RTL TR +L+E +NS +I+ISN+ F+NSPFW IHPVYCSNVVI+ +TILA
Sbjct: 190 KMWWELWWNRTLNHTRGHLVELINSHNILISNLTFKNSPFWTIHPVYCSNVVIKDMTILA 249
Query: 219 PADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGS 278
P ++PNTDGIDPDSS+NVCIED YI +GDDLVAVKSGWD+YGI PSS I IRRV+G+
Sbjct: 250 PLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGINLARPSSNIVIRRVSGT 309
Query: 279 SP-FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 337
+P SG+ +GSE SGG+ N+ E +N+++ GI +K++ GRGG+I N+++++ M +
Sbjct: 310 TPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIRIKSDQGRGGYIANVSITNFVMNRVK 369
Query: 338 KGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNI 397
I+ + DHPD++F+P A+P V GI I ++ ++ ++ G+ + + G+C+ N+
Sbjct: 370 MAIRFSRGSNDHPDEQFDPKAVPKVKGIFITNLMSLNSTKAPVLYGIAGTSYDGVCMKNV 429
Query: 398 NLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSN 441
+ G+ S C+ VSG + V P PC +L ++ + CS+
Sbjct: 430 TILGLT--PSAKWHCAFVSGFSTSVFPTPCPQLQNTTFSSLCSS 471
>gi|357443849|ref|XP_003592202.1| hypothetical protein MTR_1g100060 [Medicago truncatula]
gi|355481250|gb|AES62453.1| hypothetical protein MTR_1g100060 [Medicago truncatula]
Length = 487
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 206/401 (51%), Positives = 268/401 (66%), Gaps = 1/401 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R +TDFGGVGDGKTLNTKAF AI + GG L VPPG +LTGSFNLTSH
Sbjct: 60 RKHSAVLTDFGGVGDGKTLNTKAFNSAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHF 119
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL+L K AVI A+Q +WP + LPSYGRGRE+PGGR+ S I G L DV+ITG NGTI
Sbjct: 120 TLFLQKDAVILASQYESDWPQLPALPSYGRGREKPGGRFSSLIFGTNLIDVIITGNNGTI 179
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQG+ WW+ ++++ L TRP +IE M S I ISN+ NSP W +HPVY SN++I +
Sbjct: 180 DGQGSTWWDKFQKKQLKITRPYMIEIMYSDQIQISNLTLVNSPSWFVHPVYSSNIIINGL 239
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
TILAP D PNTDGIDPDSS+NV IED+YI +GDD +A+KSGWDEYGI G PS I +RR
Sbjct: 240 TILAPVDVPNTDGIDPDSSTNVLIEDNYIVSGDDCIAIKSGWDEYGIKVGKPSQNIIVRR 299
Query: 275 VTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
+T SP S +A+GSE SGG+++V E + N + +K+ +GRG F+++I V + +
Sbjct: 300 LTCISPKSALVALGSEMSGGIQDVRIEDVTAINTESAVRIKSAVGRGAFVKDIFVKGMDL 359
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
+ + G GDHPD+ F+PNALP ++GI +DV V +G ++G+ N PFTGIC
Sbjct: 360 NTLKYVFWMTGSYGDHPDNGFDPNALPKISGINYRDVTAKNVTIAGKVEGISNDPFTGIC 419
Query: 394 LSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQ 434
+SN+ ++ A P C+D+SG V P PC L +
Sbjct: 420 VSNVTIEMSAHKKKLPWNCTDISGVTSNVVPKPCELLKEKE 460
>gi|296088539|emb|CBI37530.3| unnamed protein product [Vitis vinifera]
Length = 528
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/410 (52%), Positives = 292/410 (71%), Gaps = 3/410 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R +SI DFGGVGDG T NT+ FR AI +Q GG+ L VP G ++TGSFNLTS+
Sbjct: 73 RKVVMSIRDFGGVGDGVTSNTETFRRAIRYMQSFGNIGGSQLNVPRGRWVTGSFNLTSNF 132
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL+L +GAVI +QD +WP+I PLPSYGRGRER GGR++S IHGD L +VVITG+NGTI
Sbjct: 133 TLFLEEGAVILGSQDLEDWPIIEPLPSYGRGRERLGGRHISLIHGDALANVVITGQNGTI 192
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQG +WW +W RTL TR +L+E NS +I+ISN+ F NSPFW IHPVYCSNVVI+ V
Sbjct: 193 DGQGKMWWELWWNRTLEHTRGHLLEIKNSHNILISNLTFMNSPFWTIHPVYCSNVVIKDV 252
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
TILAP ++PNTDGIDPDSS+NVCIED YI +GDDLVAVKSGWD+YGIA PSS I +RR
Sbjct: 253 TILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIAMARPSSNIIVRR 312
Query: 275 VTGSSP-FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
++G++P SG+ +GSE SGG+ NV E +++++ G+ +KT+ GRGG++ NIT++++ M
Sbjct: 313 LSGTTPTCSGVGIGSEMSGGISNVTMEDLHIWDSAAGVRIKTDKGRGGYVVNITINNIRM 372
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
E + I+ + DHPDD ++P A+P + GI I +V ++ L++G++ +P+ GIC
Sbjct: 373 ERVKVPIRFSRGSNDHPDDGWDPKAVPKIKGIFISNVVSLNSTKAPLLEGIEGAPYEGIC 432
Query: 394 LSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSNHF 443
+ N+ L G+A + C VSG V P C ++ S+ + C +H
Sbjct: 433 MKNVTLLGLA--PAAKWHCEFVSGFTDAVFPVSCPQMQSNVSSSWCLDHL 480
>gi|225431447|ref|XP_002274138.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
Length = 488
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/410 (52%), Positives = 292/410 (71%), Gaps = 3/410 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R +SI DFGGVGDG T NT+ FR AI +Q GG+ L VP G ++TGSFNLTS+
Sbjct: 73 RKVVMSIRDFGGVGDGVTSNTETFRRAIRYMQSFGNIGGSQLNVPRGRWVTGSFNLTSNF 132
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL+L +GAVI +QD +WP+I PLPSYGRGRER GGR++S IHGD L +VVITG+NGTI
Sbjct: 133 TLFLEEGAVILGSQDLEDWPIIEPLPSYGRGRERLGGRHISLIHGDALANVVITGQNGTI 192
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQG +WW +W RTL TR +L+E NS +I+ISN+ F NSPFW IHPVYCSNVVI+ V
Sbjct: 193 DGQGKMWWELWWNRTLEHTRGHLLEIKNSHNILISNLTFMNSPFWTIHPVYCSNVVIKDV 252
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
TILAP ++PNTDGIDPDSS+NVCIED YI +GDDLVAVKSGWD+YGIA PSS I +RR
Sbjct: 253 TILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIAMARPSSNIIVRR 312
Query: 275 VTGSSP-FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
++G++P SG+ +GSE SGG+ NV E +++++ G+ +KT+ GRGG++ NIT++++ M
Sbjct: 313 LSGTTPTCSGVGIGSEMSGGISNVTMEDLHIWDSAAGVRIKTDKGRGGYVVNITINNIRM 372
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
E + I+ + DHPDD ++P A+P + GI I +V ++ L++G++ +P+ GIC
Sbjct: 373 ERVKVPIRFSRGSNDHPDDGWDPKAVPKIKGIFISNVVSLNSTKAPLLEGIEGAPYEGIC 432
Query: 394 LSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSNHF 443
+ N+ L G+A + C VSG V P C ++ S+ + C +H
Sbjct: 433 MKNVTLLGLA--PAAKWHCEFVSGFTDAVFPVSCPQMQSNVSSSWCLDHL 480
>gi|255551873|ref|XP_002516982.1| Polygalacturonase, putative [Ricinus communis]
gi|223544070|gb|EEF45596.1| Polygalacturonase, putative [Ricinus communis]
Length = 454
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/417 (51%), Positives = 287/417 (68%), Gaps = 6/417 (1%)
Query: 26 CSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLT 85
C + R +SI +FG VGDGKTLNT +F+ AI+ ++ GG LYVPPG +LT
Sbjct: 26 CDNKPSLDPRPHSVSILEFGAVGDGKTLNTISFQNAIFYLKSFADKGGAKLYVPPGRWLT 85
Query: 86 GSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDV 145
GSFNLTSH+TL+L KGAVI +QD ++ LI PLPSYGRG E PGGRY S I+G L+DV
Sbjct: 86 GSFNLTSHLTLFLEKGAVILGSQDPSHYDLIEPLPSYGRGIELPGGRYRSLINGYKLRDV 145
Query: 146 VITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVY 205
VITG+NGTIDGQG++WW+ + +L ++RP+L+EF+ S I++SN+ F N+P +NIHPVY
Sbjct: 146 VITGDNGTIDGQGSVWWDWFNSHSLNYSRPHLVEFIESERIVVSNLTFLNAPAYNIHPVY 205
Query: 206 CSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH 265
CSNV+++ +++ AP +SP T GI PDSS+NVCIE+S I G D +++KSGWDEYGIAY
Sbjct: 206 CSNVLVQNMSLSAPPESPQTIGIVPDSSNNVCIEESIIKMGYDAISLKSGWDEYGIAYDR 265
Query: 266 PSSGITIRRV-TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 324
+ + IRRV SS S IA GSE SGG+ NV E ++LYN GI +T GRGG+I+
Sbjct: 266 ATRDVHIRRVHLQSSSGSSIAFGSEMSGGISNVHVEQVHLYNSFSGIGFRTTKGRGGYIK 325
Query: 325 NITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGL 384
I +SDV +EN + GD G HPDDKF+P A+PVV+ IT++++ GT + +G G+
Sbjct: 326 RIFISDVELENINLALGAIGDHGLHPDDKFDPKAVPVVDQITLQNLTGTNISTAGNFTGI 385
Query: 385 KNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSS--SQQTGAC 439
++SPFT +CL NI L +S CS+V G + V P PC EL S S + AC
Sbjct: 386 QDSPFTSLCLFNITLM---VSSSNSWTCSNVIGYSDSVFPVPCPELKSPYSNSSSAC 439
>gi|147776708|emb|CAN76963.1| hypothetical protein VITISV_043959 [Vitis vinifera]
Length = 479
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/403 (53%), Positives = 290/403 (71%), Gaps = 3/403 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R +SI DFGGVGDG T NT+ FR AI +Q GG+ L VP G ++TGSFNLTS+
Sbjct: 62 RKVVMSIRDFGGVGDGVTSNTETFRRAIRYMQSFGNIGGSQLNVPRGRWVTGSFNLTSNF 121
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL+L +GAVI +QD +WP+I PLPSYGRGRER GGR++S IHGD L +VVITG+NGTI
Sbjct: 122 TLFLEEGAVILGSQDLEDWPIIEPLPSYGRGRERLGGRHISLIHGDALANVVITGQNGTI 181
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQG +WW +W RTL TR +L+E NS +I+ISN+ F NSPFW IHPVYCSNVVI+ V
Sbjct: 182 DGQGKMWWELWWNRTLEHTRGHLLEIKNSHNILISNLTFMNSPFWTIHPVYCSNVVIKDV 241
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
TILAP ++PNTDGIDPDSS+NVCIED YI +GDDLVAVKSGWD+YGIA PSS I +RR
Sbjct: 242 TILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIAMARPSSNIIVRR 301
Query: 275 VTGSSP-FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
++G++P SG+ +GSE SGG+ NV E +++++ G+ +KT+ GRGG++ NIT++++ M
Sbjct: 302 LSGTTPTCSGVGIGSEMSGGISNVTMEDLHIWDSAAGVRIKTDKGRGGYVVNITINNIRM 361
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
E + I+ + DHPDD ++P A+P + GI I +V ++ L++G++ +P+ GIC
Sbjct: 362 ERVKVPIRFSRGSNDHPDDXWDPKAVPKIKGIFISNVVSLNSTKAPLLEGIEGAPYEGIC 421
Query: 394 LSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQT 436
+ N+ L G+A + C VSG V P C ++ S++ T
Sbjct: 422 MKNVTLLGLA--PAAKWHCEFVSGFTDAVFPVSCPQMQSNEAT 462
>gi|223635599|sp|A7PZL3.1|PGLR_VITVI RecName: Full=Probable polygalacturonase; Short=PG; AltName:
Full=Pectinase
Length = 491
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/409 (50%), Positives = 272/409 (66%), Gaps = 3/409 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R S+ DFGGVGDG+TLNTKAF++A+ + GG LYVP G +LTGSF+LTSH
Sbjct: 59 RAHSASLVDFGGVGDGQTLNTKAFQDAVSELSKYGSEGGAQLYVPAGKWLTGSFSLTSHF 118
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL+L + AV+ A+QD WP+I PLPSYGRGR+ GRY S I G L DV+ITG+NGTI
Sbjct: 119 TLFLHRDAVLLASQDISQWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIITGDNGTI 178
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQG +WW + L +TRP LIE M S I ISN+ NSP WN+HPVY N++I+ +
Sbjct: 179 DGQGGLWWQRFHGGKLKYTRPYLIELMYSADIQISNLTLLNSPSWNVHPVYSRNILIQGI 238
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
TILAP SPNTDGI+PDS +N IED YI +GDD VAVKSGWDEYGIAYG P+ + IRR
Sbjct: 239 TILAPVRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 298
Query: 275 VTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
+T SP+S IA+GSE SGG+++V AE I N GI +KT IGRGG++++I V + M
Sbjct: 299 LTCISPYSAVIALGSEMSGGIQDVRAEDIVAINSESGIRIKTGIGRGGYVKDIYVRGMTM 358
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
+ + + G+ G H D+ ++P A PV+ GI +D+ V + ++G+ + PFTGIC
Sbjct: 359 KTMKWAFWMTGNYGSHADNHYDPKAFPVIQGINYRDMVAENVSMAARLEGIPSDPFTGIC 418
Query: 394 LSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSS--QQTGACS 440
+SN+ + A P C+DV G + V P PCS L ++T C+
Sbjct: 419 ISNVTIHLAAKAKKVPWTCTDVEGISSGVTPTPCSTLPDQGPEKTSLCN 467
>gi|359489656|ref|XP_003633958.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 479
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/409 (50%), Positives = 272/409 (66%), Gaps = 3/409 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R S+ DFGGVGDG+TLNTKAF++A+ + GG LYVP G +LTGSF+LTSH
Sbjct: 47 RAHSASLVDFGGVGDGQTLNTKAFQDAVSELSKYGSEGGAQLYVPAGKWLTGSFSLTSHF 106
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL+L + AV+ A+QD WP+I PLPSYGRGR+ GRY S I G L DV+ITG+NGTI
Sbjct: 107 TLFLHRDAVLLASQDISQWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIITGDNGTI 166
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQG +WW + L +TRP LIE M S I ISN+ NSP WN+HPVY N++I+ +
Sbjct: 167 DGQGGLWWQRFHGGKLKYTRPYLIELMYSADIQISNLTLLNSPSWNVHPVYSRNILIQGI 226
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
TILAP SPNTDGI+PDS +N IED YI +GDD VAVKSGWDEYGIAYG P+ + IRR
Sbjct: 227 TILAPVRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 286
Query: 275 VTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
+T SP+S IA+GSE SGG+++V AE I N GI +KT IGRGG++++I V + M
Sbjct: 287 LTCISPYSAVIALGSEMSGGIQDVRAEDIVAINSESGIRIKTGIGRGGYVKDIYVRGMTM 346
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
+ + + G+ G H D+ ++P A PV+ GI +D+ V + ++G+ + PFTGIC
Sbjct: 347 KTMKWAFWMTGNYGSHADNHYDPKAFPVIQGINYRDMVAENVSMAARLEGIPSDPFTGIC 406
Query: 394 LSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSS--QQTGACS 440
+SN+ + A P C+DV G + V P PCS L ++T C+
Sbjct: 407 ISNVTIHLAAKAKKVPWTCTDVEGISSGVTPTPCSTLPDQGPEKTSLCN 455
>gi|168058134|ref|XP_001781065.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667462|gb|EDQ54091.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 446
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/430 (48%), Positives = 288/430 (66%), Gaps = 12/430 (2%)
Query: 11 LLSYFNCFSLASVVTCSGIVPMRYRNDK-----ISITDFGGVGDGKTLNTKAFREAIYRI 65
L +++ + + V+C+ +Y+N K +SI++FG VGDGKTLNT AF A++ +
Sbjct: 20 LTEFYDVCIVQTDVSCAS----KYKNWKNRPHSVSISEFGAVGDGKTLNTHAFENAMFYL 75
Query: 66 QHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRG 125
+ GG LY+P G +LTGS L SH+TL+L A I +QD ++P+I LPSYGRG
Sbjct: 76 RTYADKGGVQLYIPAGRWLTGSIKLISHLTLFLENEATILGSQDLNDYPVIPGLPSYGRG 135
Query: 126 RERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRS 185
RE PG R+ S I+G+GL+DVVITG+NGTIDGQGA+WWN ++ +TL +TR +L+E ++S+
Sbjct: 136 RELPGPRHRSLINGEGLEDVVITGDNGTIDGQGAVWWNAFQNKTLDYTRGHLVELIDSKD 195
Query: 186 IIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYIST 245
I+ISN+ F++SPFW IHPVYC NVV++ +T+LAP +SPNTDGIDPDSS VCIED YIS
Sbjct: 196 ILISNLTFRDSPFWTIHPVYCRNVVVKDMTLLAPLNSPNTDGIDPDSSQYVCIEDCYISV 255
Query: 246 GDDLVAVKSGWDEYGIAYGHPSSGITIRR-VTGSSPFSGIAVGSETSGGVENVLAEHINL 304
GDD +A+KSGWDEYG AYG PS I IRR V S +GIA GSE SGG+ +V +H+ +
Sbjct: 256 GDDAIAIKSGWDEYGTAYGMPSQHIDIRRIVVHSETSAGIAFGSEMSGGISDVKVDHMMI 315
Query: 305 YNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNG 364
+ GI KT GRGG+IRNITV +V M + I G+ G+HPD+ +N PV+
Sbjct: 316 FGARWGIRFKTGPGRGGYIRNITVDNVNMRSVNTAIAFTGNYGEHPDENWNRTDYPVIEN 375
Query: 365 ITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKP 424
+ I+++ G + +GL GL SPF I L+NI L S CS V+G+ + V P
Sbjct: 376 VLIENIVGEDITHAGLFLGLPESPFLNIHLANIALD--TKSESEDWNCSSVAGTYFFVWP 433
Query: 425 WPCSELSSSQ 434
PC + + +
Sbjct: 434 QPCPDFTKEE 443
>gi|356520375|ref|XP_003528838.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 482
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 206/408 (50%), Positives = 267/408 (65%), Gaps = 3/408 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R S+TDFGGVGDGKT NTKAF+ AI + GG LYVP G +LTGSF+L SH
Sbjct: 51 RTHSASLTDFGGVGDGKTSNTKAFQSAISHLSQYASKGGAQLYVPAGKWLTGSFSLISHF 110
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TLYL K AV+ A+QD WP I PLPSYGRGR+ P GRY S I G L DV++TG NGTI
Sbjct: 111 TLYLNKDAVLLASQDISEWPAIEPLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGGNGTI 170
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQGA WW + ++ L +TRP LIE M S I ISN+ NSP WN+HPVY SN++I+ +
Sbjct: 171 DGQGAFWWQKFHKKKLKYTRPYLIELMFSDQIQISNLTLLNSPSWNLHPVYSSNIIIKGL 230
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
TI+AP SPNTDGI+PDS +N IED YI +GDD VAVKSGWDEYGI +G P+ + IRR
Sbjct: 231 TIIAPVPSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRR 290
Query: 275 VTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
+T SP S IA+GSE SGG+++V AE I + G+ +KT +GRGG++++I V + M
Sbjct: 291 LTCISPQSAAIALGSEMSGGIQDVRAEDITAIHTESGVRIKTAVGRGGYVKDIYVKRMTM 350
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
+ + G+ G H D ++P ALP +NGI +DV V + ++G+ N PFTGIC
Sbjct: 351 HTMKWVFWMTGNYGSHADSHYDPKALPEINGINYRDVVADNVTMAARLEGISNDPFTGIC 410
Query: 394 LSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSS--QQTGAC 439
++N+ + A P C+D+ G V P PC+ L ++ AC
Sbjct: 411 IANVTIGMAAKAKKQPWTCTDIEGITSGVTPKPCNSLPDQGPEKIKAC 458
>gi|224058441|ref|XP_002299511.1| predicted protein [Populus trichocarpa]
gi|222846769|gb|EEE84316.1| predicted protein [Populus trichocarpa]
Length = 481
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 206/397 (51%), Positives = 271/397 (68%), Gaps = 1/397 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R S++DFGGVGDG T NTKAF+ AI + GG++LYVPPG +LTGSFNLTS+
Sbjct: 49 RAHSASVSDFGGVGDGTTANTKAFQAAIDHLSQFSSEGGSILYVPPGRWLTGSFNLTSYF 108
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TLYL K AV+ A+QD +PLI PLPSYGRGR+ G RY S I G+ L DV+ITG NGTI
Sbjct: 109 TLYLDKDAVLLASQDESEYPLIEPLPSYGRGRDADGARYSSLIFGNNLTDVIITGANGTI 168
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQG +WW +R L +TRP LIE M S +I ISN+ NSP WN+HPVYCSNVV++ +
Sbjct: 169 DGQGELWWTKFRAGELNYTRPYLIEIMFSTNIQISNLTLINSPSWNVHPVYCSNVVVQGL 228
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
TILAP SPNTDGI+PDS +N IED YI +GDD VAVKSGWDEYGI++G P+ + IRR
Sbjct: 229 TILAPVRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGISFGMPTKQLVIRR 288
Query: 275 VTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
+T SP S IA+GSE SGG+E+V AE I + G+ +KT +GRGG++++I V + +
Sbjct: 289 LTCISPTSAVIALGSEMSGGIEDVRAEDITAIDSESGVRIKTAVGRGGYVKDIYVRGMTL 348
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
+ + + G+ G HPD+ ++PNA+PV+ I +DV V + ++G+ PFTGIC
Sbjct: 349 KTMKWVFWMTGNYGSHPDNNYDPNAIPVIQNINYRDVVAENVTMAAKLEGIAGDPFTGIC 408
Query: 394 LSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 430
+SN+ + C+DV+G +V P PC+ L
Sbjct: 409 ISNVTIGLAQNSKKLQWNCTDVAGITSEVNPKPCALL 445
>gi|326496208|dbj|BAJ94566.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 476
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 218/447 (48%), Positives = 300/447 (67%), Gaps = 9/447 (2%)
Query: 1 MFRFLVTLSILLSYFNC----FSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTK 56
M R T LL + +S S + C+ + YR ++IT+FG VGDG TLNTK
Sbjct: 1 MARSKPTFQALLVFLTIVETQWSSVSGMYCADMASTVYRPHSVTITEFGAVGDGVTLNTK 60
Query: 57 AFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLI 116
AF+ AI+ + GG L+VP G +LTG FNL SH+TL L K AVI + + +WP+I
Sbjct: 61 AFQNAIFYLNSFADKGGAQLFVPAGRWLTGGFNLISHLTLSLDKDAVIIGSPHSSDWPVI 120
Query: 117 APLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPN 176
PLPSYGRGRE PGGR+ S I G L DV+ITG NGTIDGQGA WW+ + TL +TRP+
Sbjct: 121 DPLPSYGRGRELPGGRHQSLIFGSNLTDVIITGANGTIDGQGAYWWDWFHNHTLNYTRPH 180
Query: 177 LIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNV 236
L+E M S S++ISN+ F+NSPFWNIHPVYCS V++ +VTILAP DSPNTDGI+PDSS+NV
Sbjct: 181 LVELMYSTSVVISNLTFKNSPFWNIHPVYCSQVIVEHVTILAPLDSPNTDGINPDSSTNV 240
Query: 237 CIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS-PFSGIAVGSETSGGVE 295
CI Y+ GDD++ +KSGWDEYGI++ SS I+I +TG + +GIA+GSE SGG+
Sbjct: 241 CISHCYVRNGDDVIVIKSGWDEYGISFAQSSSNISISNITGETGGGAGIAIGSEMSGGIS 300
Query: 296 NVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFN 355
V AE + + N GI +KT GRGG++RN+ ++DV M N I+I G+ G+HPD K++
Sbjct: 301 EVRAEGLRIVNSLHGIRIKTAPGRGGYVRNVYIADVSMHNVSMAIRITGNYGEHPDSKYD 360
Query: 356 PNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDV 415
NALP+++ ITI++V G V +G+++G++ F+ IC+SN++L + + P CS +
Sbjct: 361 KNALPIISNITIENVVGIDVGVAGILEGIEGDNFSSICISNVSL---SVRSRYPWNCSRI 417
Query: 416 SGSAYQVKPWPCSELSSS-QQTGACSN 441
G + V P C +L + ++T C N
Sbjct: 418 QGYSNSVTPESCEQLKTDCEETPICYN 444
>gi|326521404|dbj|BAJ96905.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 476
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/449 (48%), Positives = 299/449 (66%), Gaps = 13/449 (2%)
Query: 1 MFRFLVTLSILLSYFNC----FSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTK 56
M R T LL + +S S + C+ + YR ++IT+FG VGDG TLNTK
Sbjct: 1 MARSKPTFQALLVFLTIVETQWSSVSGMYCADMASTVYRPHSVTITEFGAVGDGVTLNTK 60
Query: 57 AFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLI 116
AF+ AI+ + GG L+VP G +LTG FNL SH+TL L K AVI + + +WP+I
Sbjct: 61 AFQNAIFYLNSFADKGGAQLFVPAGRWLTGGFNLISHLTLSLDKDAVIIGSPHSSDWPVI 120
Query: 117 APLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPN 176
PLPSYGRGRE PGGR+ S I G L DV+ITG NGTIDGQGA WW+ + TL +TRP+
Sbjct: 121 DPLPSYGRGRELPGGRHQSLIFGSNLTDVIITGANGTIDGQGAYWWDWFHNHTLNYTRPH 180
Query: 177 LIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNV 236
L+E M S S++ISN+ F+NSPFWNIHPVYCS V++ +VTILAP DSPNTDGI+PDSS+NV
Sbjct: 181 LVELMYSTSVVISNLTFKNSPFWNIHPVYCSQVIVEHVTILAPLDSPNTDGINPDSSTNV 240
Query: 237 CIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS-PFSGIAVGSETSGGVE 295
CI Y+ GDD++ +KSGWDEYGI++ SS I+I +TG + +GIA+GSE SGG+
Sbjct: 241 CISHCYVRNGDDVIVIKSGWDEYGISFAQSSSNISISNITGETGGGAGIAIGSEMSGGIS 300
Query: 296 NVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFN 355
V AE + + N GI +KT GRGG++RN+ ++DV M N I+I G+ G+HPD K++
Sbjct: 301 EVRAEGLRIVNSLHGIRIKTAPGRGGYVRNVYIADVSMHNVSMAIRITGNYGEHPDSKYD 360
Query: 356 PNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSP--PLKCS 413
NALP+++ ITI++V G V +G+++G++ F+ IC+SN++L P P CS
Sbjct: 361 KNALPIISNITIENVVGIDVGVAGILEGIEGDNFSSICISNVSLS-----VRPRYPWNCS 415
Query: 414 DVSGSAYQVKPWPCSELSSS-QQTGACSN 441
+ G + V P C +L + ++T C N
Sbjct: 416 RIQGYSNSVTPESCEQLKTDCEETPICYN 444
>gi|357509171|ref|XP_003624874.1| hypothetical protein MTR_7g088550 [Medicago truncatula]
gi|355499889|gb|AES81092.1| hypothetical protein MTR_7g088550 [Medicago truncatula]
Length = 476
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/435 (49%), Positives = 278/435 (63%), Gaps = 5/435 (1%)
Query: 5 LVTLSILLSYFNCFSLASVVTCS-GIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIY 63
L+ ++++ S+ C+ + + R +TDFGGVGDGKT NTKAF AI
Sbjct: 15 LIEINVICVISIVLIFGSLAECNLDYLAINCRKHSAVLTDFGGVGDGKTSNTKAFNTAIT 74
Query: 64 RIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYG 123
++ GG L VPPG +LTGSFNLTSH TL+L KGAVI +QD WP + PLPSYG
Sbjct: 75 KLSQYANDGGAQLIVPPGKWLTGSFNLTSHFTLFLQKGAVILGSQDESQWPQLPPLPSYG 134
Query: 124 RGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNS 183
RGR+ PG R+ S I G L DV+ITG NGTIDGQG+ WW+ + + L TRP +IE + S
Sbjct: 135 RGRDAPGPRFSSLIFGTHLTDVIITGNNGTIDGQGSYWWDKFHNKQLKITRPYMIEILYS 194
Query: 184 RSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYI 243
I ISN+ NSP W +HP Y SN++I+ +TILAP DSPNTDGIDPDSS+NV IED+YI
Sbjct: 195 DQIQISNLTLINSPSWFVHPTYSSNIIIKGLTILAPVDSPNTDGIDPDSSTNVRIEDNYI 254
Query: 244 STGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHI 302
+GDD +A+KSGWD+YGI +G PS I IRR+T SP S IA+GSE SGG+ENV E +
Sbjct: 255 VSGDDCIAIKSGWDQYGIKFGKPSKQIIIRRLTCISPDSAMIALGSEMSGGIENVRVEDV 314
Query: 303 NLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-ARKGIKIAGDVGDHPDDKFNPNALPV 361
N + +K+ +GRGG++++I V V + R + G GDHPD+ F+P ALP
Sbjct: 315 TAINTESAVRIKSAVGRGGYVKDIFVKGVKLNTILRYVFWLTGSYGDHPDNGFDPKALPK 374
Query: 362 VNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN--INLQGVAGPTSPPLKCSDVSGSA 419
+ GI +DV V +G ++G+ N PFTGIC+SN I L + P C+DVSG
Sbjct: 375 ITGIIFRDVIAKNVTVAGQLEGISNDPFTGICISNVTIELSELKKKKKLPWNCTDVSGVT 434
Query: 420 YQVKPWPCSELSSSQ 434
V P PC LS +
Sbjct: 435 SNVVPKPCDLLSEKK 449
>gi|356560736|ref|XP_003548644.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 479
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 203/408 (49%), Positives = 267/408 (65%), Gaps = 3/408 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R S+ DFGGVGDG T NTKAF+ AI + GG LYVP G +LTGSF+L SH
Sbjct: 51 RAHSASLIDFGGVGDGNTSNTKAFQSAISHLSQYASKGGAQLYVPAGKWLTGSFSLISHF 110
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TLYL K A + A+QD WP+I PLPSYGRGR+ GRY S I G L DV++TG+NGTI
Sbjct: 111 TLYLNKDAFLLASQDIREWPVIEPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 170
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQGA WW ++++ L +TRP LIE M S I ISN+ NSP WN+HPVY SN++I+ +
Sbjct: 171 DGQGAFWWQKFQKKKLKYTRPYLIELMFSDKIQISNLTLLNSPSWNVHPVYSSNIIIKGL 230
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
TI+AP SPNTDGI+PDS +N IED YI +GDD VAVKSGWDEYGI +G P+ + IRR
Sbjct: 231 TIIAPVPSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRR 290
Query: 275 VTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
+T SP S IA+GSE SGG+++V AE I + G+ +KT +GRGG++++I V + M
Sbjct: 291 LTCISPESAAIALGSEMSGGIQDVRAEDITAIHTESGVRIKTAVGRGGYVKDIYVKRMTM 350
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
+ + G+ G H D ++PNALP +NGI +DV V + ++G+ N PFTGIC
Sbjct: 351 HTMKWVFWMTGNYGSHADSHYDPNALPEINGINYRDVVADNVTIAARLEGISNDPFTGIC 410
Query: 394 LSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSS--QQTGAC 439
++N+ + A P C+D+ G V P PC+ L ++ AC
Sbjct: 411 IANVTINMAAKAKKQPWACTDIEGITSGVTPKPCNSLPDQGPEKIKAC 458
>gi|168053514|ref|XP_001779181.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669440|gb|EDQ56027.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 392
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 196/394 (49%), Positives = 279/394 (70%), Gaps = 3/394 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R +SITDFG VGDGKTLNT AF AI+ ++ +GG LY+P G++LTGS L SH+
Sbjct: 1 RPHSVSITDFGAVGDGKTLNTHAFENAIFYLRSYAANGGAQLYIPVGLWLTGSITLISHL 60
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL+L GA I ++D +++P+I LPSYGRGRE PG R+ S I+G+GL+DV+ITG+N TI
Sbjct: 61 TLFLENGATILGSEDFFDYPVIPGLPSYGRGRELPGPRFSSLINGNGLEDVIITGDNATI 120
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQGA+WW+ +R++TL +TR +++E + S++I+ISN+ F+NSPFW IHPVYC NVV++ +
Sbjct: 121 DGQGAVWWSAFRKKTLNYTRGHMLELIESKNILISNLTFKNSPFWTIHPVYCKNVVVKSL 180
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
TIL P D+PNTDGIDPDSS +VCIED YIS GDD +++KSGWD++G ++ PS I ++R
Sbjct: 181 TILNPFDAPNTDGIDPDSSQHVCIEDCYISVGDDAISIKSGWDQFGTSFAMPSKHIKVQR 240
Query: 275 VTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
+ S S GI+ GSE SGG+ +V + + + G+ +KT +GRGG++R I+V ++ +
Sbjct: 241 ILAFSRSSAGISFGSEMSGGISDVKVDGMVVTGARWGVRIKTAVGRGGYVRGISVKNIVL 300
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
+ R I + G+ G+HPD+ +N A P++ I +K++ G + Q+GL GL+ SPF I
Sbjct: 301 HSIRTAIAVMGNYGEHPDENWNRTAYPLIEDIRMKNIVGENINQAGLFLGLQESPFRDIH 360
Query: 394 LSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPC 427
L+NI LQ T CSDV+GS V P PC
Sbjct: 361 LANIALQ--VNTTKQIWNCSDVAGSYIFVFPQPC 392
>gi|357443847|ref|XP_003592201.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355481249|gb|AES62452.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 478
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 202/401 (50%), Positives = 264/401 (65%), Gaps = 1/401 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R +TDFG VGDGKTLNTKAF AI + GG L VPPG +LTGSFNLTSH
Sbjct: 51 RKHSAVLTDFGAVGDGKTLNTKAFNAAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHF 110
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL+L K AVI +QD WP + LPSYGRGR+ P GR+ S I G L DV+ITG+NGTI
Sbjct: 111 TLFLQKDAVILGSQDESEWPQLLVLPSYGRGRDAPAGRFSSLIFGTNLTDVIITGDNGTI 170
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQG+ WW+ + ++ L TRP +IE M S I ISN+ NSP W +HP+Y SN++I +
Sbjct: 171 DGQGSYWWDKFHKKQLTLTRPYMIEIMYSDQIQISNLTLINSPTWFVHPIYSSNIIINGL 230
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
TILAP DSPNTDGI+PDS +NV IED++I +GDD +A+KSGWDEYGI G PS I IRR
Sbjct: 231 TILAPVDSPNTDGINPDSCTNVRIEDNFIVSGDDCIAIKSGWDEYGIKVGMPSQQIIIRR 290
Query: 275 VTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
+T SP S +A+GSE SGG+++V E + N I +K+ +GRG F+++I V + +
Sbjct: 291 LTCISPDSAMVALGSEMSGGIQDVRIEDVTAINTESAIRIKSAVGRGAFVKDIFVKGMDL 350
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
+ + G GDHPD+ F+PNALP ++GI +DV V +G ++G+ N PFTGIC
Sbjct: 351 NTMKYVFWMTGSYGDHPDNGFDPNALPKISGINYRDVTAKNVTIAGKLEGISNDPFTGIC 410
Query: 394 LSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQ 434
+SN+ ++ A P C+D+SG V P PC L +
Sbjct: 411 VSNVTIEMSAHKKKLPWNCTDISGVTSNVVPKPCELLQEKE 451
>gi|168006626|ref|XP_001756010.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692940|gb|EDQ79295.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 423
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 204/406 (50%), Positives = 272/406 (66%), Gaps = 6/406 (1%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R K+SITDFG VGDGKTLNTKAF A+ + S G L +P G +LTGS NL SH+
Sbjct: 19 RPKKVSITDFGAVGDGKTLNTKAFENALQYLHSNADSDGAQLTIPAGRWLTGSINLISHL 78
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL+L GA I ++D ++P+I LPSYGRGRE PG RY S I+GD L+DV ITGENGTI
Sbjct: 79 TLFLENGANILGSEDFNDYPIIPELPSYGRGRELPGARYSSLINGDNLEDVTITGENGTI 138
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQG +WW +R +TL ++R +++E + S+ I+I N+ FQNSP W IHPVYC NVVI+ +
Sbjct: 139 DGQGGVWWKAFRNKTLDYSRSHVLELIGSQDILIFNLTFQNSPSWTIHPVYCKNVVIKNL 198
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
T+L P DSPNTDGIDPDSS +VCIED YIS GDD +++KSGWD+YGI+YG PS I IRR
Sbjct: 199 TVLNPNDSPNTDGIDPDSSQHVCIEDCYISVGDDAISIKSGWDQYGISYGMPSKHIQIRR 258
Query: 275 VTGSSP----FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSD 330
+ +S +G++ GSE SGG+ NV + + LY G+ KT+ GRGG+I+++ V +
Sbjct: 259 IVSASKTFGIHAGVSFGSEMSGGISNVKVDDMVLYGARWGVRFKTSPGRGGYIKHVAVHN 318
Query: 331 VYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT 390
+ + + + + + G HPDD +N A PV+ I IK++ G + Q+G++QGL SPF
Sbjct: 319 LLLHSVKTAVAFMANYGQHPDDNWNRTAYPVIENIVIKNIVGENITQAGILQGLPESPFR 378
Query: 391 GICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQT 436
I L I L T CS VSGS + V P PC++L+ T
Sbjct: 379 HIHLKTIALD--VRSTKNVWNCSWVSGSYFFVVPQPCADLTRQNIT 422
>gi|356535839|ref|XP_003536450.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 476
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/432 (49%), Positives = 275/432 (63%), Gaps = 7/432 (1%)
Query: 5 LVTLSILLSYFNCFSLASVVTCSGIVPMRY-----RNDKISITDFGGVGDGKTLNTKAFR 59
+++L ++L N +A S +V + Y R +TDFGGVGDGKT NTKAF+
Sbjct: 15 VISLVLMLGSLN-VKVAQCRVASKLVNIEYPAINCRKHSAVLTDFGGVGDGKTSNTKAFQ 73
Query: 60 EAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPL 119
AI ++ + GG L VPPG +LTGSFNLTSH TL+L K AVI A+QD WP + L
Sbjct: 74 SAISKLSRVASDGGAQLIVPPGKWLTGSFNLTSHFTLFLHKDAVILASQDESEWPQLPVL 133
Query: 120 PSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIE 179
PSYGRGR+ PGGR+ S I G L DVVITG NGTIDGQG+ WW+ + + L TRP +IE
Sbjct: 134 PSYGRGRDAPGGRFSSLIFGTHLTDVVITGHNGTIDGQGSYWWDKFHKNQLNLTRPYMIE 193
Query: 180 FMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIE 239
M S I ISN+ NSP W +HP+Y SN+ I+ +TILAP DSPNTDGIDPDS +N IE
Sbjct: 194 IMYSDQIQISNLTLVNSPSWFVHPIYSSNITIKGLTILAPVDSPNTDGIDPDSCTNTRIE 253
Query: 240 DSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVL 298
D YI +GDD VAVKSGWDEYGI +G P+ + IRR+T SP S IA+GSE SGG+++V
Sbjct: 254 DCYIVSGDDCVAVKSGWDEYGIKFGKPTQHLVIRRLTCISPDSAMIALGSEMSGGIQDVR 313
Query: 299 AEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNA 358
E I N + +KT +GRGG++++I V + + + + G G HPD F+P A
Sbjct: 314 VEDITAINTQSAVRIKTAVGRGGYVKDIFVKGMTLSTMKYVFWMTGSYGSHPDPAFDPKA 373
Query: 359 LPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGS 418
LP + GI +DV T V S ++G+ N PFTGIC+SN+++Q C+DV+G
Sbjct: 374 LPNITGINYRDVVATNVTYSAKLEGISNDPFTGICISNVSIQVSEQKKKLQWNCTDVAGV 433
Query: 419 AYQVKPWPCSEL 430
V P C L
Sbjct: 434 TSNVTPNTCQLL 445
>gi|413916538|gb|AFW56470.1| polygalacturonase [Zea mays]
Length = 458
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/407 (50%), Positives = 277/407 (68%), Gaps = 5/407 (1%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
++IT+FG VGDG TLNT +F+ A++ ++ GG LY+P G +LTGSFNLTSH+TL+
Sbjct: 40 SVTITEFGAVGDGVTLNTVSFQNAVFYLRSFADKGGAQLYIPRGRWLTGSFNLTSHLTLF 99
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
L GAVI TQD WP++ PLPSYGRG + PG R+ S I+G L DVVITG NGTIDGQ
Sbjct: 100 LESGAVIVGTQDVSQWPVVEPLPSYGRGMDLPGSRHRSLINGQNLVDVVITGNNGTIDGQ 159
Query: 158 GAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL 217
G+ WWN +R L ++RP+L+EF++S I+ISN+ F NSP W+IHPVYCSNVV+ VTI
Sbjct: 160 GSTWWNWFRSNKLNYSRPHLVEFVDSEQIVISNITFLNSPAWSIHPVYCSNVVVHSVTIQ 219
Query: 218 APADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTG 277
D+P GI PDS SN+CIEDS IS D +++KSGWD+ GIA+G P+S I I R+
Sbjct: 220 TSLDAPLNHGIVPDSCSNMCIEDSSISVSHDAISLKSGWDKQGIAFGRPTSDIHISRLDL 279
Query: 278 SSPF-SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENA 336
S + +A GSE SGG+ ++ A+ + +++ G+ KT GRGG+IR+ +SDV ME+
Sbjct: 280 QSSLGAALAFGSEMSGGISDIHADRLLIHSSSRGVFFKTAPGRGGYIRDTVISDVQMEDV 339
Query: 337 RKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 396
I GD HPDD+F+P ALPVV+ IT+K++ GT++ +G++ G+ PFT ICLSN
Sbjct: 340 DVAIAFTGDWPSHPDDQFDPAALPVVSHITLKNMTGTRISVAGVLSGIAGDPFTDICLSN 399
Query: 397 IN--LQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL-SSSQQTGACS 440
IN L A PTS CS+VSG + V P PC +L + S CS
Sbjct: 400 INFSLADSASPTS-HWSCSNVSGYSELVFPEPCLDLQTQSSDASVCS 445
>gi|357139453|ref|XP_003571296.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 485
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/410 (50%), Positives = 281/410 (68%), Gaps = 5/410 (1%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGT--LLYVPPGVYLTGSFNLTS 92
R S+ +FG VGDG T NT AFR A+ ++ + G +L VPPG +LTGSFNLTS
Sbjct: 73 RAASASVEEFGAVGDGVTSNTAAFRRAVAALEQRAAAAGGGAMLEVPPGRWLTGSFNLTS 132
Query: 93 HMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENG 152
TL+L GAVI +QD WPLIAPLPSYGRGRER G R++S IHG+ L DVVITG NG
Sbjct: 133 RFTLFLHHGAVILGSQDPEEWPLIAPLPSYGRGRERLGPRHISLIHGENLDDVVITGSNG 192
Query: 153 TIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIR 212
TIDGQG +WW +W RTL TR +LIE +NS +++ISNV +NSPFW +HPVYC NVVI+
Sbjct: 193 TIDGQGRMWWELWWNRTLNHTRGHLIELVNSTNVMISNVTLRNSPFWTVHPVYCRNVVIK 252
Query: 213 YVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITI 272
+TILAP ++PNTDGIDPDSSS+VCIED YI +GDDLVA+KSGWD+YGI+ PS+ I I
Sbjct: 253 DLTILAPLNAPNTDGIDPDSSSDVCIEDCYIESGDDLVAIKSGWDQYGISVNKPSTNIII 312
Query: 273 RRVTGSSP-FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDV 331
+RV+G++P SG+ +GSE SGGV VL ++++N + +KT++GRGGF+ N+TV++V
Sbjct: 313 QRVSGTTPTCSGVGIGSEMSGGVSGVLIRDLHVWNSASAVRIKTDVGRGGFVTNVTVANV 372
Query: 332 YMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTG 391
ME + I+ + DH DDK++ ALP ++ + I D+ G VQ++ +++ + + + G
Sbjct: 373 TMERVKVPIRFSRGSDDHSDDKYDRTALPTISDVRIVDIVGVDVQRAPILEAVHGAVYEG 432
Query: 392 ICLSNINLQGVAGPTSPPL--KCSDVSGSAYQVKPWPCSELSSSQQTGAC 439
IC N++L+ +C V G A+ V P C EL + + C
Sbjct: 433 ICFRNVSLRLREEVRRRHAGWQCESVYGEAHGVFPEACEELRHNGSSSWC 482
>gi|356522584|ref|XP_003529926.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 498
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 202/398 (50%), Positives = 267/398 (67%), Gaps = 2/398 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R S+TDFGGVGDG T NTKAF+ AI + GG LYVP G +LTGSF++TSH
Sbjct: 66 RAHSASLTDFGGVGDGNTSNTKAFQSAISYLSQYASKGGAQLYVPAGKWLTGSFSMTSHF 125
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TLYL K AV+ A+QD WP+I PLPSYGRGR+ P GRY SFI G L DV++TG+NGTI
Sbjct: 126 TLYLNKDAVLLASQDMNEWPVIKPLPSYGRGRDAPAGRYTSFIFGTNLTDVIVTGDNGTI 185
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQGA WW + + L +TRP LIE M S I ISN+ F NSP WN+HPVY SN++I+ +
Sbjct: 186 DGQGAFWWQQFYNKRLNYTRPYLIELMFSDKIQISNLTFLNSPSWNVHPVYSSNIIIKGL 245
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
TI+AP SPNTDGI+PDS +N IED YI +GDD VAVKSGWDE+GI +G P+ + IRR
Sbjct: 246 TIIAPVPSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEFGIKFGWPTKQLVIRR 305
Query: 275 VTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
+T SP S IA+GSE SGG+++V AE I + G+ +KT+IGRGG++++I V + M
Sbjct: 306 LTCISPQSAAIALGSEMSGGIQDVRAEDITAIHTESGVRIKTSIGRGGYVKDIYVRRMTM 365
Query: 334 ENARKGIKIAGDVGDHPDDK-FNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGI 392
+ + G+ G + ++ ++P ALP + GI +DV V + ++G+ NSPFTGI
Sbjct: 366 HTMKWAFWMTGNYGSYANNSHYDPKALPEIKGINYRDVVADNVTMAATLEGISNSPFTGI 425
Query: 393 CLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 430
C++N+ + P C+D+ G V P PC+ L
Sbjct: 426 CIANVTISMADKANEKPWTCTDIEGITSGVTPKPCNSL 463
>gi|242042413|ref|XP_002468601.1| hypothetical protein SORBIDRAFT_01g048880 [Sorghum bicolor]
gi|241922455|gb|EER95599.1| hypothetical protein SORBIDRAFT_01g048880 [Sorghum bicolor]
Length = 463
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/405 (50%), Positives = 271/405 (66%), Gaps = 1/405 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R +T++G VGDG+TLNT AF +A+ + H R GG L VPPG +LTG FNLTS
Sbjct: 41 RKHVAKVTEYGAVGDGRTLNTGAFAKAVADLSHRARDGGAALVVPPGKWLTGPFNLTSCF 100
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TLYL +GA I A+QD +WPLIAPLPSYGRGR+ PG RY++FI G L DV+ITG+NGTI
Sbjct: 101 TLYLDEGAEILASQDMNHWPLIAPLPSYGRGRDEPGPRYINFIGGSNLTDVIITGKNGTI 160
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
+GQG +WW+ + + L TR +L+E ++S +IIISNV F ++P+WN+HP YC+NV I V
Sbjct: 161 NGQGQVWWDKFHAKELKSTRGHLLELLHSDNIIISNVTFVDAPYWNLHPTYCTNVTISGV 220
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
TILAP +SPNTDGIDPDSS++V IED YI +GDD VAVKSGWDEYGI + PS I IRR
Sbjct: 221 TILAPLNSPNTDGIDPDSSTHVKIEDCYIVSGDDCVAVKSGWDEYGIKFNMPSQHIVIRR 280
Query: 275 VTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
+T SP S IA+GSE SGG+ +V AE N + +K+ GRGGF+++I V + +
Sbjct: 281 LTCISPTSAMIALGSEMSGGIRDVRAEDNIAINTESAVRIKSGAGRGGFVKDIFVRGLSL 340
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
+ + G+ G HPD+ NPNA+P V GI DV+ V +G ++G+ N P+TGIC
Sbjct: 341 HTMKWVFWMTGNYGQHPDNTSNPNAMPEVTGINYSDVFAENVTTAGRMEGIPNDPYTGIC 400
Query: 394 LSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGA 438
+SN+ T C++V G V P PC EL + + A
Sbjct: 401 ISNVTASLAPNATELQWNCTNVKGVTSNVSPKPCPELGAEGKPCA 445
>gi|168005670|ref|XP_001755533.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693240|gb|EDQ79593.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 393
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/395 (52%), Positives = 272/395 (68%), Gaps = 4/395 (1%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R +SI++FG VGDGKTLNT AF A++ ++ GG LY+P G +LTGS L SH+
Sbjct: 1 RPHSVSISEFGAVGDGKTLNTHAFENAMFYLRTYADKGGVQLYIPAGRWLTGSIKLISHL 60
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITG-ENGT 153
TL+L A I +QD ++P+I LPSYGRGRE PG R+ S I+G+GL+DVVITG +NGT
Sbjct: 61 TLFLENEATILGSQDLKDYPIIPGLPSYGRGRELPGPRHSSLINGEGLEDVVITGSDNGT 120
Query: 154 IDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRY 213
IDGQGA+WW+ + +TL +TR +L+E ++S I+ISN+ F++SPFW IHPVYC NVV++
Sbjct: 121 IDGQGAVWWDAFYNKTLDYTRGHLVELIDSSDILISNLTFRDSPFWTIHPVYCRNVVVKD 180
Query: 214 VTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIR 273
+TILAP DSPNTDGIDPDSS NVCIED YIS G D +A+KSGWDEYG +YG PS I +R
Sbjct: 181 MTILAPLDSPNTDGIDPDSSHNVCIEDCYISVGHDAIAIKSGWDEYGTSYGMPSKHIDVR 240
Query: 274 RVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVY 332
R+T S S GIA GSE SGG+ +V +H+ ++ GI KT +GRGG+IRN+TV +V
Sbjct: 241 RITVHSKTSAGIAFGSEMSGGISDVKVDHMMIFGARWGIRFKTGLGRGGYIRNVTVDNVD 300
Query: 333 MENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGI 392
M + I G+ G+HPD+ +N PV+ I+I++V G + +GL GL SPF I
Sbjct: 301 MHSVGTAIAFTGNYGEHPDENWNRTDYPVIENISIENVVGENITHAGLFLGLPESPFHNI 360
Query: 393 CLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPC 427
L+NI L S CS V+G+ + V P PC
Sbjct: 361 HLANIALD--VKSESDDWNCSSVAGTYFFVWPQPC 393
>gi|356534103|ref|XP_003535597.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 466
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/402 (51%), Positives = 263/402 (65%), Gaps = 1/402 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R +TDFGGVGDG T NTKAF+ AI ++ GG +L VPPG +LTG FNLTSH
Sbjct: 44 RKHSAVLTDFGGVGDGITSNTKAFQSAISKLSQYASDGGAMLVVPPGKWLTGPFNLTSHF 103
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL+L GAVI A+QD WP + LPSYGRGR+ PGGR+ S I G L DVVITG NG I
Sbjct: 104 TLFLDFGAVILASQDESEWPQLPVLPSYGRGRDAPGGRFSSLIFGTHLTDVVITGNNGLI 163
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQGA WWN + Q L TRP LIE M S I IS + NSP W +HPVY SN++I+ +
Sbjct: 164 DGQGAYWWNKFHQGQLTLTRPYLIEIMYSDQIQISFLTLVNSPTWFVHPVYSSNIIIKGL 223
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
TI AP DSPNTDGI+PDS SN+ IED I++GDD +AVKSGWDEYGI +G P+ + IRR
Sbjct: 224 TIKAPVDSPNTDGINPDSCSNIRIEDCNITSGDDCIAVKSGWDEYGIRFGMPTQHLIIRR 283
Query: 275 VTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
+T SP S IA+GSE SGG+ +V AE + N + +KT IGRGG+++NI V + +
Sbjct: 284 ITCVSPDSAMIALGSEMSGGIYDVRAEDLTAINTEAAVRIKTAIGRGGYVKNIFVKGMNL 343
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
+ I G GDHPD ++P ALP + GI +DV T V +S ++G+ N PFTGIC
Sbjct: 344 NTMKYVFWITGTYGDHPDPGYDPKALPYITGINYRDVVATNVTKSARLEGISNDPFTGIC 403
Query: 394 LSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQ 435
+SN+++Q CS++SG V P+PC+ L Q
Sbjct: 404 ISNVSIQVSEQQKKLQWNCSNISGVTSNVTPYPCALLPEKGQ 445
>gi|242094380|ref|XP_002437680.1| hypothetical protein SORBIDRAFT_10g000660 [Sorghum bicolor]
gi|241915903|gb|EER89047.1| hypothetical protein SORBIDRAFT_10g000660 [Sorghum bicolor]
Length = 495
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/409 (50%), Positives = 278/409 (67%), Gaps = 6/409 (1%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHL--RRSGGTLLYVPPGVYLTGSFNLTS 92
R S+ DFGGVGDG T NT AFR A+ + +GG +LYVP G +LTG FNLTS
Sbjct: 57 RAHTASLADFGGVGDGTTSNTAAFRSAVDHLSQYSGEDAGGAMLYVPAGKWLTGPFNLTS 116
Query: 93 HMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENG 152
H TL+L AVI A+QD WP+I PLPSYGRGR++ GGR+ S + G L DVVITG NG
Sbjct: 117 HFTLFLHSDAVILASQDINEWPIIDPLPSYGRGRDKIGGRFASLVGGSNLTDVVITGNNG 176
Query: 153 TIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIR 212
TIDGQGA+WW+ + + L +TR LIE M+S +I ISN+ NSP WNIHPVY SN+V++
Sbjct: 177 TIDGQGAMWWSKFHKNQLKYTRGYLIELMHSDTIYISNLTLLNSPAWNIHPVYSSNIVVQ 236
Query: 213 YVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITI 272
+TILAP +SPNTDGI+PDS S+V IED YI +GDD VA+KSGWDEYGI+YG PS I I
Sbjct: 237 GITILAPTNSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQHIVI 296
Query: 273 RRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDV 331
RR+T SP S IA+GSE SGG+++V AE I N G+ +KT +GRG +++++ V +
Sbjct: 297 RRLTCVSPTSAVIALGSEMSGGIQDVRAEDITAINSESGVRIKTAVGRGAYVKDVFVRRM 356
Query: 332 YMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKV-QQSGLIQGLKNSPFT 390
+ + + G+ HPDDK++PNA+PVV+ I+ +DV T V +++ ++G++ +PF
Sbjct: 357 TLTTMKWVFWMTGNYKSHPDDKYDPNAIPVVDNISYQDVVATGVYKEAARLEGIQGAPFK 416
Query: 391 GICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGAC 439
GIC++N+ ++ P C+DV G + V P PC L + GAC
Sbjct: 417 GICVANVTAD-LSKSRKYPWTCADVEGVSVNVSPAPCQPLQGAHD-GAC 463
>gi|226507254|ref|NP_001148987.1| polygalacturonase precursor [Zea mays]
gi|195623798|gb|ACG33729.1| polygalacturonase [Zea mays]
Length = 458
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/407 (50%), Positives = 276/407 (67%), Gaps = 5/407 (1%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
++IT+FG VGDG TLNT +F+ A++ ++ GG LY+P G +LTGSFNLTSH+TL+
Sbjct: 40 SVTITEFGAVGDGVTLNTVSFQNAVFYLRSFADKGGAQLYIPRGRWLTGSFNLTSHLTLF 99
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
L GAVI TQD WP++ PLPSYGRG + PG R+ S I+G L DVVITG NGTIDGQ
Sbjct: 100 LESGAVIVGTQDVSQWPVVEPLPSYGRGMDLPGSRHRSLINGQNLIDVVITGNNGTIDGQ 159
Query: 158 GAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL 217
G+ WWN +R L ++RP+L+EF++S I+ISN+ F NSP W+IHPVYCSNVV+ VTI
Sbjct: 160 GSTWWNWFRSNKLNYSRPHLVEFVDSEQIVISNITFLNSPAWSIHPVYCSNVVVHSVTIQ 219
Query: 218 APADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTG 277
D+P GI PDS SN+CIEDS IS D +++KSGWD+ GIA+G P+S I I R+
Sbjct: 220 TSLDAPLNHGIVPDSCSNMCIEDSSISVSHDAISLKSGWDKQGIAFGRPTSDIHISRLDL 279
Query: 278 SSPF-SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENA 336
S + + GSE SGG+ +V A+ + +++ G+ KT GRGG+IR+ +SDV ME+
Sbjct: 280 QSSLGAALTFGSEMSGGISDVHADRLLIHSSFRGVFFKTAPGRGGYIRDTVISDVQMEDV 339
Query: 337 RKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 396
I GD HPDD+F+P ALPVV+ IT+K++ GT++ +G++ G+ PFT ICLSN
Sbjct: 340 DVAIAFTGDWPSHPDDQFDPTALPVVSHITLKNMTGTRISVAGVLSGIAGDPFTDICLSN 399
Query: 397 IN--LQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL-SSSQQTGACS 440
IN L A PTS CS+VSG + V P PC +L + S CS
Sbjct: 400 INFSLADSASPTS-HWSCSNVSGYSELVFPEPCLDLQTQSSDASICS 445
>gi|212274809|ref|NP_001130359.1| uncharacterized protein LOC100191454 precursor [Zea mays]
gi|194688932|gb|ACF78550.1| unknown [Zea mays]
gi|413920257|gb|AFW60189.1| hypothetical protein ZEAMMB73_155387 [Zea mays]
Length = 458
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 198/397 (49%), Positives = 269/397 (67%), Gaps = 1/397 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R ++IT+FG VGDG+TLNT F+ A++ ++ GG LYVP G +LTGSFNLTSH+
Sbjct: 40 RPHSVTITEFGAVGDGRTLNTVPFQNAVFYVRSFADKGGAQLYVPRGRWLTGSFNLTSHL 99
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TLYL +GAVI +D+ W ++ PLPSYG+G + PG R+ S I G L DVVITG NG I
Sbjct: 100 TLYLEEGAVIVGAKDSSQWLIVEPLPSYGQGLDLPGPRHQSLISGYNLTDVVITGNNGVI 159
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQG +WW R L +RPNL+EF+ S I+ISN+ F NSP W+IHPVYCSNV + V
Sbjct: 160 DGQGLVWWQWLRSHELNHSRPNLLEFLYSEDIVISNLTFLNSPAWSIHPVYCSNVKVHNV 219
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
TI D+P TDGI PDS SN+CIEDS IS + +++KSGWD YGI++G P+S I I R
Sbjct: 220 TIKTSLDAPLTDGIVPDSCSNLCIEDSTISVSHEAISLKSGWDRYGISFGRPTSDIRISR 279
Query: 275 VT-GSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
V SS + +A GSE SGG+ ++ H+ +++ GI KT+ GRGG+I ++ +S+V M
Sbjct: 280 VDLLSSSGAALAFGSEMSGGISDIHVNHLRIHDSSKGISFKTSPGRGGYIEDVVISEVQM 339
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
EN GI+ G+ HPDD F+P+ LP ++ +T+K++ GT + +G++ G++ +PFT IC
Sbjct: 340 ENVHVGIEFTGNCSTHPDDSFDPSDLPAIDHVTMKNMAGTNISVAGVLSGIEGAPFTAIC 399
Query: 394 LSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 430
LSN+N AG CSDVSG + V P PC+EL
Sbjct: 400 LSNLNFSMAAGSGPSSWSCSDVSGYSEAVFPEPCTEL 436
>gi|7939578|dbj|BAA95779.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 453
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/409 (50%), Positives = 276/409 (67%), Gaps = 4/409 (0%)
Query: 26 CSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLT 85
C + R +SI +FG VGDGKTLNT AF+ A++ ++ GG LYVPPG +LT
Sbjct: 25 CKENFKLDPRPHSVSILEFGAVGDGKTLNTIAFQNAVFYLKSFADKGGAQLYVPPGKWLT 84
Query: 86 GSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDV 145
GSFNLTSH+TL+L KGA I A+ D +W +++PLPSYGRG E PG RY S I+GD L DV
Sbjct: 85 GSFNLTSHLTLFLEKGATILASPDPSHWDVVSPLPSYGRGIELPGKRYRSLINGDNLIDV 144
Query: 146 VITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVY 205
VITGENGT DGQGA WW +L ++RP++IEF++S+ I+ISN+ F N+P NIHPVY
Sbjct: 145 VITGENGTFDGQGAAWWEWLESGSLNYSRPHIIEFVSSKHILISNLTFLNAPAINIHPVY 204
Query: 206 CSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH 265
CS + IR V I DSP+ G+ PDSS NVCIEDS I+ G D V++KSGWD+YGI YG
Sbjct: 205 CSQIHIRKVLIETSVDSPHVLGVAPDSSDNVCIEDSTINVGHDAVSLKSGWDQYGIHYGR 264
Query: 266 PSSGITIRRVTGSSPF-SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 324
P++ + IR + SP +GI+ GSE SGGV +V E +N+++ +G+ +T GRGG+IR
Sbjct: 265 PTTAVHIRNLRLKSPTGAGISFGSEMSGGVSDVTVERLNIHSSLIGVAFRTTRGRGGYIR 324
Query: 325 NITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGL 384
NIT+SDV + + I G G HPDDKF+ +ALPVV I +++ G + +G + G+
Sbjct: 325 NITISDVDLTSVDTAIVANGHTGSHPDDKFDRDALPVVTHIVMRNFTGVDIGVAGNLTGI 384
Query: 385 KNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSS 433
SPFT ICL++I+LQ + CS+VSG + V P PC EL SS
Sbjct: 385 GESPFTSICLADIHLQ---TRSEESWICSNVSGFSDDVSPEPCQELMSS 430
>gi|15229058|ref|NP_190464.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|6522571|emb|CAB62015.1| endo-polygalacturonase-like protein [Arabidopsis thaliana]
gi|67633678|gb|AAY78763.1| glycoside hydrolase family 28 protein [Arabidopsis thaliana]
gi|332644955|gb|AEE78476.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 469
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 196/405 (48%), Positives = 269/405 (66%), Gaps = 2/405 (0%)
Query: 32 MRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLT 91
+ R +TDFG VGDGKT NTKAFR AI ++ + GG L VPPG +LTGSFNLT
Sbjct: 38 LNCRKHSAILTDFGAVGDGKTSNTKAFRNAISKLSQMATDGGAQLVVPPGKWLTGSFNLT 97
Query: 92 SHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPG-GRYMSFIHGDGLQDVVITGE 150
SH TL++ +GA I A+QD WP+IAPLPSYG+GR+ G GR+ S I G L DVVITG
Sbjct: 98 SHFTLFIQRGATILASQDESEWPVIAPLPSYGKGRDGTGTGRFNSLISGTNLTDVVITGN 157
Query: 151 NGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVV 210
NGTI+GQG WW+ ++++ TRP LIE + S++I ISN+ +SP WNIHPVYC++V+
Sbjct: 158 NGTINGQGQYWWDKFKKKQFKITRPYLIEILFSKNIQISNITLIDSPSWNIHPVYCNSVI 217
Query: 211 IRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGI 270
++ VT+LAP PNTDGI+PDS +N IED YI +GDD +AVKSGWD+YGI +G P+ +
Sbjct: 218 VKSVTVLAPVTVPNTDGINPDSCTNTLIEDCYIVSGDDCIAVKSGWDQYGIKFGMPTQQL 277
Query: 271 TIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVS 329
+IRR+T SP S G+A+GSE SGG+++V E + L N I +KT +GRG ++++I
Sbjct: 278 SIRRLTCISPKSAGVALGSEMSGGIKDVRIEDVTLTNTESAIRIKTAVGRGAYVKDIYAR 337
Query: 330 DVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPF 389
+ M+ + ++G+ G HPD+ F+P ALP + I +D+ V S + G+ PF
Sbjct: 338 RITMKTMKYVFWMSGNYGSHPDEGFDPKALPEITNINYRDMTAENVTMSASLDGIDKDPF 397
Query: 390 TGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQ 434
TGIC+SN+ + A C+DV+G +V P PCS L +
Sbjct: 398 TGICISNVTIALAAKAKKMQWNCTDVAGVTSRVTPEPCSLLPEKK 442
>gi|297830296|ref|XP_002883030.1| hypothetical protein ARALYDRAFT_318449 [Arabidopsis lyrata subsp.
lyrata]
gi|297328870|gb|EFH59289.1| hypothetical protein ARALYDRAFT_318449 [Arabidopsis lyrata subsp.
lyrata]
Length = 452
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/409 (51%), Positives = 275/409 (67%), Gaps = 5/409 (1%)
Query: 26 CSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLT 85
C I + R +SI +FG VGDGKTLNT AF+ AI+ ++ GG LYVPPG +LT
Sbjct: 25 CKEIFKLDPRPHSVSILEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPPGKWLT 84
Query: 86 GSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDV 145
GSFNLTSH+TL+L KGA I A+ D +W +++PLPSYGRG E PG RY S I+GD L DV
Sbjct: 85 GSFNLTSHLTLFLEKGATILASPDPSHWDVVSPLPSYGRGIELPGKRYRSLINGDNLIDV 144
Query: 146 VITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVY 205
VITGENGT DGQGA WW +L ++RP++IEF++S+ I+ISN+ F N+P NIHPVY
Sbjct: 145 VITGENGTFDGQGAAWWEWLETGSLNYSRPHIIEFVSSKHILISNLTFLNAPSINIHPVY 204
Query: 206 CSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH 265
CS + IR V I DSP G+ PDSS NVCIEDS I+ G D V++KSGWD+YGI YG
Sbjct: 205 CSQIHIRKVLIETSVDSPYVLGVAPDSSDNVCIEDSTINVGHDAVSLKSGWDQYGIHYGR 264
Query: 266 PSSGITIRRVTGSSPF-SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 324
P++ + IR ++ SP +GI+ GSE SGG+ +V E +N+ + VG+ +T GRGG+IR
Sbjct: 265 PTTAVYIRNLSLKSPTGAGISFGSEMSGGISDVTVERLNIQSSHVGVAFRTTRGRGGYIR 324
Query: 325 NITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGL 384
NIT+SDV + + I G G HPDDKF+ +ALPVV I +++ G + +G + G+
Sbjct: 325 NITISDVDLTSVDTAIVANGHTGSHPDDKFDWDALPVVTHIVLRNFTGVDIGLAGNLTGI 384
Query: 385 KNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSS 433
SPFT ICL++I+L S CS+VSG + V P PC EL SS
Sbjct: 385 GESPFTSICLTDIHLH----THSDSWICSNVSGFSDDVSPEPCQELMSS 429
>gi|21553827|gb|AAM62920.1| polygalacturonase, putative [Arabidopsis thaliana]
Length = 453
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/409 (50%), Positives = 276/409 (67%), Gaps = 4/409 (0%)
Query: 26 CSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLT 85
C + R +SI +FG VGDGKTLNT AF+ A++ ++ GG LYVPPG +LT
Sbjct: 25 CKENFKLDPRPHSVSILEFGAVGDGKTLNTIAFQNAVFYLKSFADKGGAQLYVPPGKWLT 84
Query: 86 GSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDV 145
GSFNLTSH+TL+L KGA I A+ D +W +++PLPSYGRG E PG RY S I+GD L DV
Sbjct: 85 GSFNLTSHLTLFLEKGATILASPDPSHWDVVSPLPSYGRGIELPGKRYRSLINGDNLIDV 144
Query: 146 VITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVY 205
VITGENGT DGQGA WW +L ++RP++IEF++S+ I+ISN+ F N+P NIHPVY
Sbjct: 145 VITGENGTFDGQGAAWWEWLESGSLNYSRPHIIEFVSSKHILISNLTFLNAPAINIHPVY 204
Query: 206 CSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH 265
CS + IR V I DSP+ G+ PDSS NVCIEDS I+ G D V++KSGWD+YGI YG
Sbjct: 205 CSQIHIRKVLIETSVDSPHVLGVAPDSSDNVCIEDSTINVGHDAVSLKSGWDQYGIHYGR 264
Query: 266 PSSGITIRRVTGSSPF-SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 324
P++ + IR + SP +GI+ GSE SGGV +V E +N+++ +G+ +T GRGG+IR
Sbjct: 265 PTTAVHIRNLRLKSPTGAGISFGSEMSGGVSDVTVERLNIHSSLIGVAFRTTRGRGGYIR 324
Query: 325 NITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGL 384
NIT+SDV + + I G G HPDDKF+ +ALPVV I +++ G + +G + G+
Sbjct: 325 NITISDVDLTSVDTAIVTNGHTGSHPDDKFDRDALPVVTHIVMRNFTGVDIGVAGNLTGI 384
Query: 385 KNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSS 433
SPFT ICL++I+LQ + CS+VSG + V P PC EL SS
Sbjct: 385 GESPFTSICLADIHLQ---TRSEESWICSNVSGFSDDVSPEPCQELMSS 430
>gi|15228881|ref|NP_188308.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|14334802|gb|AAK59579.1| putative polygalacturonase [Arabidopsis thaliana]
gi|21280835|gb|AAM44924.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332642352|gb|AEE75873.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 455
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/409 (50%), Positives = 276/409 (67%), Gaps = 4/409 (0%)
Query: 26 CSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLT 85
C + R +SI +FG VGDGKTLNT AF+ A++ ++ GG LYVPPG +LT
Sbjct: 27 CKENFKLDPRPHSVSILEFGAVGDGKTLNTIAFQNAVFYLKSFADKGGAQLYVPPGKWLT 86
Query: 86 GSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDV 145
GSFNLTSH+TL+L KGA I A+ D +W +++PLPSYGRG E PG RY S I+GD L DV
Sbjct: 87 GSFNLTSHLTLFLEKGATILASPDPSHWDVVSPLPSYGRGIELPGKRYRSLINGDNLIDV 146
Query: 146 VITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVY 205
VITGENGT DGQGA WW +L ++RP++IEF++S+ I+ISN+ F N+P NIHPVY
Sbjct: 147 VITGENGTFDGQGAAWWEWLESGSLNYSRPHIIEFVSSKHILISNLTFLNAPAINIHPVY 206
Query: 206 CSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH 265
CS + IR V I DSP+ G+ PDSS NVCIEDS I+ G D V++KSGWD+YGI YG
Sbjct: 207 CSQIHIRKVLIETSVDSPHVLGVAPDSSDNVCIEDSTINVGHDAVSLKSGWDQYGIHYGR 266
Query: 266 PSSGITIRRVTGSSPF-SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 324
P++ + IR + SP +GI+ GSE SGGV +V E +N+++ +G+ +T GRGG+IR
Sbjct: 267 PTTAVHIRNLRLKSPTGAGISFGSEMSGGVSDVTVERLNIHSSLIGVAFRTTRGRGGYIR 326
Query: 325 NITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGL 384
NIT+SDV + + I G G HPDDKF+ +ALPVV I +++ G + +G + G+
Sbjct: 327 NITISDVDLTSVDTAIVANGHTGSHPDDKFDRDALPVVTHIVMRNFTGVDIGVAGNLTGI 386
Query: 385 KNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSS 433
SPFT ICL++I+LQ + CS+VSG + V P PC EL SS
Sbjct: 387 GESPFTSICLADIHLQ---TRSEESWICSNVSGFSDDVSPEPCQELMSS 432
>gi|15233124|ref|NP_191708.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|42572755|ref|NP_974473.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|334186188|ref|NP_001190154.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|6850840|emb|CAB71079.1| putative protein [Arabidopsis thaliana]
gi|332646690|gb|AEE80211.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332646691|gb|AEE80212.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332646692|gb|AEE80213.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 476
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/401 (49%), Positives = 263/401 (65%), Gaps = 1/401 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R+ SIT++GGVGDGKTLNTKAF+ A+ + GG L+VP G +LTGSFNLTSH
Sbjct: 41 RSHSASITEYGGVGDGKTLNTKAFQSAVDHLSQYSSEGGAQLFVPAGKWLTGSFNLTSHF 100
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL+L K A++ A QD +P++ LPSYGRGR+ GGR+ S I G L DV+ITG NGTI
Sbjct: 101 TLFLHKDAILLAAQDLNEYPILKALPSYGRGRDAAGGRFASLIFGTNLSDVIITGNNGTI 160
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQG+ WW + L +TRP LIE M S +I ISN+ F +SP WNIHPVY SN++++ V
Sbjct: 161 DGQGSFWWQKFHGGKLKYTRPYLIELMFSDTIQISNLTFLDSPSWNIHPVYSSNIIVKGV 220
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
TI+AP SPNTDGI+PDS +N IED YI +GDD +AVKSGWDEYGI++G P+ + IRR
Sbjct: 221 TIIAPVKSPNTDGINPDSCTNTRIEDCYIISGDDCIAVKSGWDEYGISFGMPTKHLVIRR 280
Query: 275 VTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
+T SP+S IA+GSE SGG+E+V AE I Y G+ +KT +GRG F++NI V + +
Sbjct: 281 LTCISPYSAAIALGSEMSGGIEDVRAEDITAYQTESGVRIKTAVGRGAFVKNIYVKGMNL 340
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
+ + G+ H D ++P+ALP + GI +D+ V +G ++G+ PFTGIC
Sbjct: 341 HTMKWVFWMTGNYKAHADSHYDPHALPEITGINYRDIVAENVSMAGRLEGISGDPFTGIC 400
Query: 394 LSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQ 434
+SN + A CSDV G V P PC L +
Sbjct: 401 ISNATISMAAKHKKAIWMCSDVEGVTSGVDPKPCDLLDGQE 441
>gi|413942575|gb|AFW75224.1| glycoside hydrolase, family 28 [Zea mays]
Length = 506
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/409 (50%), Positives = 275/409 (67%), Gaps = 6/409 (1%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGT--LLYVPPGVYLTGSFNLTS 92
R S+ DFGGVGDG T NT AFR A+ + GG +LYVP G +LTG FNLTS
Sbjct: 75 RAHTASVADFGGVGDGTTSNTAAFRSAVDHLSQYSGEGGGGGMLYVPAGKWLTGPFNLTS 134
Query: 93 HMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENG 152
H TLYL + AVI +QD WP++ PLPSYGRGR++ GGR+ S I G L DVVITG NG
Sbjct: 135 HFTLYLHQDAVILGSQDVGEWPIVDPLPSYGRGRDKVGGRFASLIGGSNLTDVVITGSNG 194
Query: 153 TIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIR 212
TIDGQGA+WW+ + + L +TR LIE M+S +I ISN+ NSP WNIHPVY SN+V++
Sbjct: 195 TIDGQGAMWWSKFHKNQLKYTRGYLIELMHSDTIYISNLTLLNSPAWNIHPVYSSNIVVQ 254
Query: 213 YVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITI 272
+TILAP +SPNTDGI+PDS S+V IED YI +GDD VA+KSGWDEYGI+YG PS I I
Sbjct: 255 GITILAPTNSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQHIVI 314
Query: 273 RRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDV 331
RR+T SP S IA+GSE SGG+++V AE I N + +KT +GRG ++R++ +
Sbjct: 315 RRLTCVSPTSAVIALGSEMSGGIQDVRAEDITAINTESAVRIKTAVGRGAYVRDVFARRM 374
Query: 332 YMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKV-QQSGLIQGLKNSPFT 390
+ ++ + GD HPDDK++PNA+PVV I+ +DV T V +++ +QG++ +PF
Sbjct: 375 TLTTMKRVFWMTGDYKSHPDDKYDPNAVPVVANISYQDVVATGVYKEAARLQGIQGAPFR 434
Query: 391 GICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGAC 439
GIC++N+ ++ P C+D+ G + V P PC L + GAC
Sbjct: 435 GICVANVTAD-LSKSRKYPWNCADIEGVSANVSPAPCDPLQGAHD-GAC 481
>gi|255545184|ref|XP_002513653.1| polygalacturonase, putative [Ricinus communis]
gi|223547561|gb|EEF49056.1| polygalacturonase, putative [Ricinus communis]
Length = 473
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/397 (51%), Positives = 260/397 (65%), Gaps = 1/397 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R +TDFGGVGDGKT NTK F+ AI + GG L +P G +LTGSFNLTSH
Sbjct: 49 RKHSAVLTDFGGVGDGKTSNTKVFQTAIANLSKYSPDGGAQLIIPAGKWLTGSFNLTSHF 108
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL+L K AV+ A+QD WP++ PLPSYGRGR+ GGR+ S I G L+DVVITG NGTI
Sbjct: 109 TLFLHKEAVLLASQDEAEWPILPPLPSYGRGRDATGGRFSSLIFGTNLKDVVITGNNGTI 168
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQGA WWN + + L TRP LIE + S I ISN+I NSP WN+HP Y SNV+I+ +
Sbjct: 169 DGQGATWWNKFHKGLLNQTRPYLIELLYSHKIQISNLILINSPSWNVHPTYSSNVLIQGL 228
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
TILAP DSPNTDGI+PDS +N IED YI +GDD +AVKSGWD+YGI +G P+ + IRR
Sbjct: 229 TILAPVDSPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDQYGIKFGMPTKKLVIRR 288
Query: 275 VTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
+T SP S IA+GSE SGG+++V AE I N GI +KT GRG ++++I V +
Sbjct: 289 LTCISPDSATIALGSEMSGGIQDVRAEDITAINTQSGIRIKTAAGRGAYVKDIFVRRMNF 348
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
+ + + G G HPD ++PNALP++ I +D+ V S ++G++ PFTGIC
Sbjct: 349 KTMKYVFWMTGSYGSHPDKGYDPNALPIITRINYRDIVAENVTYSARLEGIEKDPFTGIC 408
Query: 394 LSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 430
+SN N+ P C+D+ G V P PCS L
Sbjct: 409 ISNANITLTKKPEKLQWNCTDIEGVTSNVNPRPCSLL 445
>gi|55295844|dbj|BAD67712.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|125553735|gb|EAY99340.1| hypothetical protein OsI_21311 [Oryza sativa Indica Group]
gi|125595774|gb|EAZ35554.1| hypothetical protein OsJ_19837 [Oryza sativa Japonica Group]
Length = 485
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/409 (50%), Positives = 274/409 (66%), Gaps = 6/409 (1%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHL--RRSGGTLLYVPPGVYLTGSFNLTS 92
R S+TDFGGVGDG T NT AF+ A+ + GG +LYVP G +LTG FNLTS
Sbjct: 54 RAHTASLTDFGGVGDGTTSNTAAFKSAVDHLSQYSGEGGGGAMLYVPAGKWLTGPFNLTS 113
Query: 93 HMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENG 152
H TL+L AVI +QD WP+I PLPSYGRGR++ GGRY S I G L DVVITG NG
Sbjct: 114 HFTLFLHSDAVILGSQDMGEWPIIDPLPSYGRGRDKAGGRYASLIGGSNLTDVVITGANG 173
Query: 153 TIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIR 212
TIDGQGA+WW+ + L +TR LIE M+S +++ISNV NSP WNIHPVY SN+V++
Sbjct: 174 TIDGQGAMWWSKFHSNKLKYTRGYLIEVMHSDTVVISNVTLVNSPAWNIHPVYSSNIVVQ 233
Query: 213 YVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITI 272
VTILAP SPNTDGI+PDS S+V IED YI +GDD VA+KSGWDEYGIAYG PS I +
Sbjct: 234 GVTILAPTHSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGIAYGMPSQHIVV 293
Query: 273 RRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDV 331
RR+T SP S IA+GSE SGG+ +V AE I N + +KT +GRG ++R++ V +
Sbjct: 294 RRLTCVSPTSAVIALGSEMSGGISDVRAEDITAVNSESAVRIKTAVGRGAYVRDVFVRGM 353
Query: 332 YMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKV-QQSGLIQGLKNSPFT 390
++ + + G+ HPDD ++PNA+PVV+ I+ +DV T V +++ ++G++ +PF
Sbjct: 354 SLDTMKWVFWMTGNYKSHPDDGYDPNAIPVVDNISYQDVVATGVYKEAARLEGIQGAPFR 413
Query: 391 GICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGAC 439
GIC++N+ ++ P C+D+ G + V P PC L + GAC
Sbjct: 414 GICIANVTAT-LSKSRKYPWTCTDIEGVSTGVTPAPCQPLQGAHD-GAC 460
>gi|297817470|ref|XP_002876618.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297322456|gb|EFH52877.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 475
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/425 (47%), Positives = 270/425 (63%), Gaps = 10/425 (2%)
Query: 11 LLSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRR 70
+L F F + +TC R+ SIT++GGVGDGKTLNTKAF+ A+ +
Sbjct: 26 VLQSFETFEY-TAITC--------RSHSASITEYGGVGDGKTLNTKAFQSAVDHLSQYSS 76
Query: 71 SGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPG 130
GG L+VP G +LTGSFNLTSH TL+L K A++ A QD +P++ LPSYGRGR+ G
Sbjct: 77 DGGAQLFVPAGKWLTGSFNLTSHFTLFLHKDAILLAAQDLNEYPILKALPSYGRGRDAAG 136
Query: 131 GRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISN 190
GR+ S G L DV+ITG NGTIDGQG+ WW + L +TRP LIE M S +I ISN
Sbjct: 137 GRFASLFFGTNLSDVIITGNNGTIDGQGSFWWQKFHGGKLKYTRPYLIELMFSDTIQISN 196
Query: 191 VIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLV 250
+ F +SP WNIHPVY SN++++ VTI+AP SPNTDGI+PDS +N IED YI +GDD +
Sbjct: 197 LTFLDSPSWNIHPVYSSNIIVKGVTIIAPVKSPNTDGINPDSCTNTRIEDCYIISGDDCI 256
Query: 251 AVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGV 309
AVKSGWDEYGI++G P+ + IRR+T SP+S IA+GSE SGG+E+V AE I Y
Sbjct: 257 AVKSGWDEYGISFGMPTKHLVIRRLTCISPYSAAIALGSEMSGGIEDVRAEDITAYQTES 316
Query: 310 GIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKD 369
G+ +KT +GRG F++NI V + + + + G+ H D ++P+ALP + GI +D
Sbjct: 317 GVRIKTAVGRGAFVKNIYVKGMNLHTMKWVFWMTGNYKAHADSHYDPHALPEITGINYRD 376
Query: 370 VWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSE 429
+ V +G ++G+ PFTGIC+SN + A CSDV G V P PC
Sbjct: 377 IVAENVSMAGRLEGISGDPFTGICISNATISMAAKHKKAIWMCSDVEGVTSGVDPKPCDL 436
Query: 430 LSSSQ 434
L +
Sbjct: 437 LDGQE 441
>gi|226506670|ref|NP_001151164.1| glycoside hydrolase, family 28 precursor [Zea mays]
gi|194707808|gb|ACF87988.1| unknown [Zea mays]
gi|413942574|gb|AFW75223.1| glycoside hydrolase, family 28 [Zea mays]
Length = 486
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/409 (50%), Positives = 275/409 (67%), Gaps = 6/409 (1%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGT--LLYVPPGVYLTGSFNLTS 92
R S+ DFGGVGDG T NT AFR A+ + GG +LYVP G +LTG FNLTS
Sbjct: 55 RAHTASVADFGGVGDGTTSNTAAFRSAVDHLSQYSGEGGGGGMLYVPAGKWLTGPFNLTS 114
Query: 93 HMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENG 152
H TLYL + AVI +QD WP++ PLPSYGRGR++ GGR+ S I G L DVVITG NG
Sbjct: 115 HFTLYLHQDAVILGSQDVGEWPIVDPLPSYGRGRDKVGGRFASLIGGSNLTDVVITGSNG 174
Query: 153 TIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIR 212
TIDGQGA+WW+ + + L +TR LIE M+S +I ISN+ NSP WNIHPVY SN+V++
Sbjct: 175 TIDGQGAMWWSKFHKNQLKYTRGYLIELMHSDTIYISNLTLLNSPAWNIHPVYSSNIVVQ 234
Query: 213 YVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITI 272
+TILAP +SPNTDGI+PDS S+V IED YI +GDD VA+KSGWDEYGI+YG PS I I
Sbjct: 235 GITILAPTNSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQHIVI 294
Query: 273 RRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDV 331
RR+T SP S IA+GSE SGG+++V AE I N + +KT +GRG ++R++ +
Sbjct: 295 RRLTCVSPTSAVIALGSEMSGGIQDVRAEDITAINTESAVRIKTAVGRGAYVRDVFARRM 354
Query: 332 YMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKV-QQSGLIQGLKNSPFT 390
+ ++ + GD HPDDK++PNA+PVV I+ +DV T V +++ +QG++ +PF
Sbjct: 355 TLTTMKRVFWMTGDYKSHPDDKYDPNAVPVVANISYQDVVATGVYKEAARLQGIQGAPFR 414
Query: 391 GICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGAC 439
GIC++N+ ++ P C+D+ G + V P PC L + GAC
Sbjct: 415 GICVANVTAD-LSKSRKYPWNCADIEGVSANVSPAPCDPLQGAHD-GAC 461
>gi|195644726|gb|ACG41831.1| glycoside hydrolase, family 28 [Zea mays]
Length = 439
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/409 (50%), Positives = 275/409 (67%), Gaps = 6/409 (1%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGT--LLYVPPGVYLTGSFNLTS 92
R S+ DFGGVGDG T NT AFR A+ + GG +LYVP G +LTG FNLTS
Sbjct: 8 RAHTASVADFGGVGDGTTSNTAAFRSAVDHLSQYSGEGGGGGMLYVPAGKWLTGPFNLTS 67
Query: 93 HMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENG 152
H TLYL + AVI +QD WP++ PLPSYGRGR++ GGR+ S I G L DVVITG NG
Sbjct: 68 HFTLYLHQDAVILGSQDVGEWPIVDPLPSYGRGRDKVGGRFASLIGGSNLTDVVITGSNG 127
Query: 153 TIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIR 212
TIDGQGA+WW+ + + L +TR LIE M+S +I ISN+ NSP WNIHPVY SN+V++
Sbjct: 128 TIDGQGAMWWSKFHKNQLKYTRGYLIELMHSDTIYISNLTLLNSPAWNIHPVYSSNIVVQ 187
Query: 213 YVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITI 272
+TILAP +SPNTDGI+PDS S+V IED YI +GDD VA+KSGWDEYGI+YG PS I I
Sbjct: 188 GITILAPTNSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQHIVI 247
Query: 273 RRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDV 331
RR+T SP S IA+GSE SGG+++V AE I N + +KT +GRG ++R++ +
Sbjct: 248 RRLTCVSPTSAVIALGSEMSGGIQDVRAEDITAINTESAVRIKTAVGRGAYVRDVFARRM 307
Query: 332 YMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKV-QQSGLIQGLKNSPFT 390
+ ++ + GD HPDDK++PNA+PVV I+ +DV T V +++ +QG++ +PF
Sbjct: 308 TLTTMKRVFWMTGDYKSHPDDKYDPNAVPVVANISYQDVVATGVYKEAARLQGIQGAPFR 367
Query: 391 GICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGAC 439
GIC++N+ ++ P C+D+ G + V P PC L + GAC
Sbjct: 368 GICVANVTAD-LSKSRKYPWNCADIEGVSANVSPAPCDPLQGAHD-GAC 414
>gi|226508288|ref|NP_001151102.1| glycoside hydrolase, family 28 precursor [Zea mays]
gi|195644332|gb|ACG41634.1| glycoside hydrolase, family 28 [Zea mays]
gi|219886803|gb|ACL53776.1| unknown [Zea mays]
gi|414864493|tpg|DAA43050.1| TPA: glycoside hydrolase, family 28 [Zea mays]
Length = 463
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 205/405 (50%), Positives = 266/405 (65%), Gaps = 1/405 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R +T++G VGDG+TLNT AF A+ + GG L VPPG +LTG FNLTS
Sbjct: 41 RKHVARVTEYGAVGDGRTLNTAAFARAVADLARRAPDGGAALVVPPGKWLTGPFNLTSCF 100
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TLYL +GA I A+QD +WPLIAPLPSYGRGR+ PG RY +FI G L DV+ITG+NGTI
Sbjct: 101 TLYLDEGAEILASQDMKHWPLIAPLPSYGRGRDEPGPRYSNFIGGSNLTDVIITGKNGTI 160
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
+GQG +WW+ + + L FTR +L+E + S +IIISNV F ++P+WN+HP YC+NV I V
Sbjct: 161 NGQGQVWWDKFHAKELKFTRGHLLELLYSDNIIISNVTFVDAPYWNLHPTYCTNVTISGV 220
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
TILAP +SPNTDGIDPDSSS V IED YI +GDD VAVKSGWDEYGI + PS I IRR
Sbjct: 221 TILAPVNSPNTDGIDPDSSSRVKIEDCYIVSGDDCVAVKSGWDEYGIRFNMPSQHIVIRR 280
Query: 275 VTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
+T SP S IA+GSE SGG+ +V AE N + VK+ GRGGF+R+I V + +
Sbjct: 281 LTCVSPTSAMIALGSEMSGGIRDVRAEDSVAINTESAVRVKSGAGRGGFVRDIFVRGLSL 340
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
+ + G+ G HPD+ +PNA+P V GI DV+ V +G ++G+ P+TGIC
Sbjct: 341 HTMKWVFWMTGNYGQHPDNTSDPNAMPEVTGINYSDVFAENVTMAGRMEGIPKDPYTGIC 400
Query: 394 LSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGA 438
+SN+ + C++V G V P PC EL++ + A
Sbjct: 401 ISNVTARLAPDAKELQWNCTNVKGVTSHVSPKPCPELAAEGKPCA 445
>gi|357507519|ref|XP_003624048.1| Polygalacturonase [Medicago truncatula]
gi|355499063|gb|AES80266.1| Polygalacturonase [Medicago truncatula]
Length = 483
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/423 (49%), Positives = 271/423 (64%), Gaps = 4/423 (0%)
Query: 21 ASVVTCSGIVP-MRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVP 79
A +VT S + + R S+TDFGGVGDG T NTKAF+ AI + GG+ LYVP
Sbjct: 36 AKIVTTSFVYNGINCRAHSASLTDFGGVGDGNTSNTKAFQSAISHLSQYGSQGGSQLYVP 95
Query: 80 PGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHG 139
G +LTGSF+LTSH TLYL + AV+ A+QD WP++ PLPSYGRGR+ P GR+ S I G
Sbjct: 96 AGKWLTGSFSLTSHFTLYLDRDAVLLASQDITEWPVLEPLPSYGRGRDAPAGRFRSLIFG 155
Query: 140 DGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFW 199
L DV++TG NGTIDGQGA WW + ++ L +TRP LIE M S SI ISN+ NSP W
Sbjct: 156 TNLTDVIVTGGNGTIDGQGAFWWQQFHRKKLKYTRPYLIELMFSDSIQISNLTLLNSPSW 215
Query: 200 NIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEY 259
N+HPVY SN++I+ +TI+AP SPNTDGI+PDS +N IED YI +GDD VAVKSGWDEY
Sbjct: 216 NVHPVYSSNIIIQGITIIAPISSPNTDGINPDSCTNTKIEDCYIVSGDDCVAVKSGWDEY 275
Query: 260 GIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIG 318
GI +G P+ + IRR+T SPFS IA+GSE SGG+++V AE I G+ +KT +G
Sbjct: 276 GIKFGWPTKQLVIRRLTCISPFSATIALGSEMSGGIQDVRAEDITAIRTESGVRIKTAVG 335
Query: 319 RGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQS 378
RGG++++I V M + K+ GD H D F+PNALP + I +DV V +
Sbjct: 336 RGGYVKDIYVKRFTMHTMKWAFKMTGDYNSHADTHFDPNALPEIANINYRDVVAENVTIA 395
Query: 379 GLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSS--QQT 436
QG+ N PF GIC++N+ L C+D+ G V P PC L ++
Sbjct: 396 ARFQGISNDPFKGICIANVTLGMAVKAKKRSWTCTDIEGMTSGVTPPPCDLLPDQGPEKI 455
Query: 437 GAC 439
GAC
Sbjct: 456 GAC 458
>gi|297816104|ref|XP_002875935.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321773|gb|EFH52194.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 469
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/439 (47%), Positives = 282/439 (64%), Gaps = 6/439 (1%)
Query: 1 MFRFLVTLSIL-LSYFNCFSLASVVTCSGI--VPMRYRNDKISITDFGGVGDGKTLNTKA 57
MF LV L+IL S +VV+ SGI + R +TDFG VGDGKT NT A
Sbjct: 5 MFGILVILAILSFPAIESRSHQNVVS-SGIRFSALNCRKHSAILTDFGAVGDGKTSNTNA 63
Query: 58 FREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIA 117
F++AI ++ + GG L VPPG +LTGSFNLTSH TL++ +GA I A+QD WP+IA
Sbjct: 64 FKKAISKLSQMATDGGAQLVVPPGKWLTGSFNLTSHFTLFIQRGATILASQDESEWPVIA 123
Query: 118 PLPSYGRGRERPG-GRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPN 176
PLPSYG+GR+ G GR+ S I G L DVVITG NGTI+GQG WW+ ++++ TRP
Sbjct: 124 PLPSYGKGRDGTGTGRFNSLISGTNLTDVVITGNNGTINGQGQYWWDKFKKKQFKLTRPY 183
Query: 177 LIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNV 236
LIE + S++I ISN+ +SP WNIHPVYC+NV+++ VT+LAP PNTDGI+PDS +N
Sbjct: 184 LIELLFSKNIQISNITLIDSPSWNIHPVYCNNVIVKSVTVLAPVTVPNTDGINPDSCTNT 243
Query: 237 CIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVE 295
IED YI +GDD +AVKSGWD+YGI +G P+ ++IRR+T SP S G+A+GSE SGG++
Sbjct: 244 LIEDCYIVSGDDCIAVKSGWDQYGIKFGMPTQQLSIRRLTCISPKSAGVALGSEMSGGIK 303
Query: 296 NVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFN 355
+V E + L N I +KT GRG ++++I + M+ + ++G+ HPD+ F+
Sbjct: 304 DVRIEDVTLTNTESAIRIKTAAGRGAYVKDIFARRITMKTMKYVFWMSGNYNSHPDEGFD 363
Query: 356 PNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDV 415
P ALP V I +D+ V S + G+ PFTGIC+SN+ + C+DV
Sbjct: 364 PKALPEVTNINYRDMTAENVTMSASLDGIHKDPFTGICISNVTIALADKAKKVQWNCTDV 423
Query: 416 SGSAYQVKPWPCSELSSSQ 434
+G +V P PCS L +
Sbjct: 424 AGVTSRVTPEPCSLLPEKK 442
>gi|357150536|ref|XP_003575492.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 451
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/399 (48%), Positives = 270/399 (67%), Gaps = 1/399 (0%)
Query: 33 RYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTS 92
R R ++IT+FG VGDG T+NT F+ AI+ ++ GG LYVP G +LTGSFNLTS
Sbjct: 31 RTRPHSVTITEFGAVGDGVTVNTVPFQNAIFYLRSFADKGGAQLYVPKGRWLTGSFNLTS 90
Query: 93 HMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENG 152
H+TL+L K AVI T++ WP++ PLPSYG+G + PG R+ S I+G + DVVITG NG
Sbjct: 91 HLTLFLEKDAVIVGTKEVTEWPIVEPLPSYGQGIDLPGARHRSLINGHNVTDVVITGNNG 150
Query: 153 TIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIR 212
IDGQG WWN +R L ++RP+L+EF +S I+ISN+ F NSP W IHPVYCSNV +
Sbjct: 151 VIDGQGLTWWNWFRSNKLNYSRPHLVEFEDSEEIVISNLTFLNSPAWAIHPVYCSNVTVN 210
Query: 213 YVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITI 272
+TI D+P +DGI PDS SNVCIEDS IS D +++KSGWD YGI +G P+S I I
Sbjct: 211 NITIQTSLDAPLSDGIVPDSCSNVCIEDSRISVSHDAISLKSGWDNYGITFGRPTSDIHI 270
Query: 273 RRVTGSSPF-SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDV 331
RV + + +A+GSE SGG+ +V +H++++ G+ +T GRGG+IR++ +SDV
Sbjct: 271 CRVDLQASLGAALALGSEMSGGISDVHVDHLHIHASSKGVSFRTAPGRGGYIRDVIISDV 330
Query: 332 YMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTG 391
ME+ I+ GD HPD+ F+P+ALPV++GIT+K++ GT + +G++ G+ PFT
Sbjct: 331 QMEDVHVAIEFTGDWSSHPDEHFDPSALPVISGITLKNMVGTNISVAGVLSGIDGDPFTD 390
Query: 392 ICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 430
ICLSN+N S CS++SG + V P PC++L
Sbjct: 391 ICLSNVNFSIPDSAHSTSWSCSNISGYSELVFPEPCTDL 429
>gi|115471367|ref|NP_001059282.1| Os07g0245200 [Oryza sativa Japonica Group]
gi|34393209|dbj|BAC82923.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113610818|dbj|BAF21196.1| Os07g0245200 [Oryza sativa Japonica Group]
Length = 446
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/374 (52%), Positives = 262/374 (70%), Gaps = 4/374 (1%)
Query: 65 IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGR 124
+ GG L+VP G +LTGSFNL SH+T+ L AVI +QD+ +WP+I PLPSYGR
Sbjct: 39 VHRPHNKGGAELFVPAGRWLTGSFNLISHLTVSLDADAVIIGSQDSSDWPVIDPLPSYGR 98
Query: 125 GRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSR 184
GRE PG R+ S I G L DV+ITG NGTIDGQG +WWN + TL +TRP L+E M S
Sbjct: 99 GRELPGKRHQSLIFGSNLTDVIITGANGTIDGQGELWWNWFHNHTLNYTRPPLLELMYSD 158
Query: 185 SIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYIS 244
++ISN+ F N+PFWNIHPVYCS V+++++TILAP SPNTDGIDPDSSSNVCIED YI
Sbjct: 159 RVVISNLTFMNAPFWNIHPVYCSQVLVQHLTILAPISSPNTDGIDPDSSSNVCIEDCYIR 218
Query: 245 TGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHIN 303
GDD+V +KSGWDEYGI++ HPSS I+IR +TG + S GIA GSE SGG+ +V AE +
Sbjct: 219 NGDDIVVIKSGWDEYGISFAHPSSNISIRNITGQTRNSAGIAFGSEMSGGISDVRAEGLR 278
Query: 304 LYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVN 363
N GI +KT GRGG+++NI ++DV M+N I+I G+ G+HPDD ++ NALPV++
Sbjct: 279 FINSVHGIRIKTAPGRGGYVKNIYIADVSMDNVSIAIRITGNYGEHPDDNYDKNALPVIS 338
Query: 364 GITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVK 423
ITIK+V G + +G++ G++ F+ ICLSN++L + ++ P CS + G + V
Sbjct: 339 NITIKNVVGVNIGTAGMLLGIQGDIFSNICLSNVSL---SSKSADPWNCSLIEGFSNSVA 395
Query: 424 PWPCSELSSSQQTG 437
P C +L S G
Sbjct: 396 PEICEQLRPSPGPG 409
>gi|388509890|gb|AFK43011.1| unknown [Medicago truncatula]
Length = 483
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/423 (49%), Positives = 271/423 (64%), Gaps = 4/423 (0%)
Query: 21 ASVVTCSGIVP-MRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVP 79
A +VT S + + R S+TDFGGVGDG T NTKAF+ AI + GG+ LYVP
Sbjct: 36 AKIVTTSFVYNGINCRAHSASLTDFGGVGDGNTSNTKAFQSAISHLSQYGSQGGSQLYVP 95
Query: 80 PGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHG 139
G +LTGSF+LTSH TLYL + AV+ A+QD WP++ PLPSYGRGR+ P GR+ S I G
Sbjct: 96 AGKWLTGSFSLTSHFTLYLDRDAVLLASQDITEWPVLEPLPSYGRGRDAPAGRFRSLIFG 155
Query: 140 DGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFW 199
L DV++TG NGTIDGQGA WW + ++ L +TRP LIE M S SI ISN+ NSP W
Sbjct: 156 TNLTDVIVTGGNGTIDGQGAFWWQQFHRKELKYTRPYLIELMFSDSIQISNLTLLNSPSW 215
Query: 200 NIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEY 259
N+HPVY SN++I+ +TI+AP SPNTDGI+PDS +N IED YI +GDD VAVKSGWDEY
Sbjct: 216 NVHPVYSSNIIIQGITIIAPISSPNTDGINPDSCTNTKIEDCYIVSGDDCVAVKSGWDEY 275
Query: 260 GIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIG 318
GI +G P+ + IRR+T SPFS IA+GSE SGG+++V AE I G+ +KT +G
Sbjct: 276 GIKFGWPTKQLVIRRLTCISPFSATIALGSEMSGGIQDVRAEDITAIRTESGVRIKTAVG 335
Query: 319 RGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQS 378
RGG++++I V M + K+ GD H D F+PNALP + I +DV V +
Sbjct: 336 RGGYVKDIYVKRFTMHTMKWAFKMTGDYNSHADTHFDPNALPEIANINYRDVVAENVTIA 395
Query: 379 GLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSS--QQT 436
QG+ N PF GIC++N+ L C+D+ G V P PC L ++
Sbjct: 396 ARFQGIFNDPFKGICIANVTLGMAVKAKKRSWTCTDIEGMTSGVTPPPCDLLPDQGPEKI 455
Query: 437 GAC 439
GAC
Sbjct: 456 GAC 458
>gi|356570982|ref|XP_003553661.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 527
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/403 (51%), Positives = 275/403 (68%), Gaps = 6/403 (1%)
Query: 32 MRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLT 91
++ R +SI +FG VGDG TLNT AF AI+ ++ GG LYVP G +LTGSFNLT
Sbjct: 100 LKARPHSVSILEFGAVGDGITLNTVAFENAIFYLKSFADKGGAQLYVPSGTWLTGSFNLT 159
Query: 92 SHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGEN 151
+H+TL+L +GA I A+QD +W ++ LPSYGRG GRY S I+G L DVVITG+N
Sbjct: 160 NHLTLFLERGATIIASQDYSHWDIVDFLPSYGRGI----GRYRSLIYGQNLSDVVITGDN 215
Query: 152 GTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVI 211
GTIDGQG+IWW ++ +L +TRPNLIEF++S +IISN+ F +SP W IHPVYCSNV I
Sbjct: 216 GTIDGQGSIWWKLFNSNSLNYTRPNLIEFVDSVDVIISNLTFLDSPAWGIHPVYCSNVQI 275
Query: 212 RYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGIT 271
+ +T APA+ P T GI PDSS NVCIE+S ISTG D + +KSGWD+YGIAYG P+S +
Sbjct: 276 QNITYRAPAEFPYTSGIVPDSSQNVCIENSNISTGHDAIVLKSGWDQYGIAYGKPTSNVH 335
Query: 272 IRRV-TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSD 330
I V SS +G+A GSE SGG+ ++AE +++ N +GI +KT GRGG++R I +SD
Sbjct: 336 ISNVYLQSSSGAGLAFGSEMSGGISVIIAEKLHILNSPIGIELKTTRGRGGYMRGIFISD 395
Query: 331 VYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT 390
+EN GI + G G HPDDK++ ++LPVV IT K+V G + +G G+ SPF+
Sbjct: 396 AELENISLGISMTGYSGFHPDDKYDTSSLPVVGDITFKNVIGANISVAGNFSGIVESPFS 455
Query: 391 GICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSS 433
ICLSN+ + P SP CS+V G + V P PC ++ SS
Sbjct: 456 TICLSNVTFSLSSEP-SPSWFCSNVIGFSEHVIPEPCPDIQSS 497
>gi|357114278|ref|XP_003558927.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 462
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/402 (51%), Positives = 266/402 (66%), Gaps = 6/402 (1%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRS---GGTLLYVPPGVYLTGSFNLT 91
R IT++G VGDGKTLNT AF A+ + RR+ GG L VP G +LTG FNLT
Sbjct: 39 RKHVKRITEYGAVGDGKTLNTAAFARAVADLS--RRAADGGGAALVVPEGKWLTGPFNLT 96
Query: 92 SHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGEN 151
SH TL+L +GA I A+QD +WPLIAPLPSYGRGR+ PG RY +FI G L DV+ITG+N
Sbjct: 97 SHFTLFLHRGAEILASQDLNDWPLIAPLPSYGRGRDEPGPRYSNFIGGSNLTDVIITGQN 156
Query: 152 GTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVI 211
GTI+GQG +WW+ + + L +TR L+E + S IIISNV F ++P WN+HP YC+NV I
Sbjct: 157 GTINGQGQVWWDKYHAKELTYTRGYLLELLYSHDIIISNVTFVDAPSWNLHPTYCTNVTI 216
Query: 212 RYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGIT 271
VTILAP SPNTDGIDPDSSS V IED YI +GDD +AVKSGWDEYGI + PS I
Sbjct: 217 SGVTILAPVHSPNTDGIDPDSSSYVKIEDCYIVSGDDCIAVKSGWDEYGIKFNMPSQHIV 276
Query: 272 IRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSD 330
+RR+T SP S IA+GSE SGG+++V AE N + +K+ +GRGGF++++ V
Sbjct: 277 VRRLTCISPTSAMIALGSEMSGGIQDVRAEDNIAINTESAVRIKSGVGRGGFVKDVFVRG 336
Query: 331 VYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT 390
+ + + + G+ G HPD+ NP ALP V GI +DV+ V +G ++G+ N P+T
Sbjct: 337 LSLHTMKWVFWMTGNYGQHPDNSSNPKALPEVTGINYRDVFAENVTMAGRMEGIPNDPYT 396
Query: 391 GICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSS 432
GIC+SN+ Q C+DV G A V P PC EL +
Sbjct: 397 GICMSNVTAQLAPDAKKLQWNCTDVKGVASGVSPKPCPELGA 438
>gi|224064057|ref|XP_002301370.1| predicted protein [Populus trichocarpa]
gi|222843096|gb|EEE80643.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/397 (49%), Positives = 262/397 (65%), Gaps = 1/397 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R S+TDFGGVGDG T NTKAF++AI + GG+ L+VP G +LTGSF+LTSH
Sbjct: 39 RAHSASLTDFGGVGDGTTSNTKAFKDAIDHLSQFSSDGGSQLFVPAGKWLTGSFSLTSHF 98
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TLYL K AV+ A+QD WP++ PLPSYGRGR+ GRY S I G L DV+ITG NGTI
Sbjct: 99 TLYLHKDAVLLASQDMQEWPVMKPLPSYGRGRDAAAGRYSSLIFGTNLTDVIITGNNGTI 158
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQGA WW + + L +TRP LIE M S +I ISN+ NSP WN+HPVY +++++ +
Sbjct: 159 DGQGAFWWQNFHKGKLKYTRPYLIEIMFSDTIQISNLTLLNSPSWNVHPVYSRDILVQGI 218
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
TI+AP SPNTDGI+PDS +N IED YI +GDD VAVKSGWDEYGIA+G P+ + IRR
Sbjct: 219 TIIAPISSPNTDGINPDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIAFGMPTKQLVIRR 278
Query: 275 VTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
+T SP+S IA+GSE SGG+E+V AE I + G+ +KT +GRGG++++I V + M
Sbjct: 279 LTCISPYSATIALGSEMSGGIEDVRAEDITAIHTESGVRIKTAVGRGGYVKDIYVKRMTM 338
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
+ + G+ G H D ++PNALP++ GI +D+ V + ++G+ PF IC
Sbjct: 339 HTMKWVFWMTGNYGSHADKNYDPNALPLIQGINYRDMVADNVTMAARLEGIAGDPFKEIC 398
Query: 394 LSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 430
+SN+ + P C+++ G V P PC L
Sbjct: 399 ISNVTIGLAPKAKKVPWTCTEIEGMTSGVSPRPCDLL 435
>gi|449530307|ref|XP_004172137.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/410 (49%), Positives = 265/410 (64%), Gaps = 1/410 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R SIT+FGGVGDG T NTKAF+ A+ ++ GG LYVP G +LTGSFNLTSH
Sbjct: 62 RAHTASITEFGGVGDGVTSNTKAFQAAVEQLSQYTDDGGAQLYVPAGKWLTGSFNLTSHF 121
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL+L + AV+ A+QD WP++ PLPSYG GR+ GGRY+S I G L DVVITG NGTI
Sbjct: 122 TLFLHQDAVLLASQDPNEWPVVEPLPSYGHGRDTSGGRYISLIFGTNLTDVVITGNNGTI 181
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQG WW ++ Q L +TRP LIE M S I IS++ NSP WN+HPVY SN++I+ +
Sbjct: 182 DGQGDRWWQLFHQGKLKYTRPYLIELMYSSDIQISSLTLLNSPAWNVHPVYSSNILIQGI 241
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
TI+AP SPNTDGI+PDS +NV IED YI +GDD VAVKSGWDEYGI++G P+ + +RR
Sbjct: 242 TIIAPVRSPNTDGINPDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGISFGLPTKQLVVRR 301
Query: 275 VTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
+T SP S IA+GSE SGG+E+V AE I + G+ +KT IGRGG++++I V + M
Sbjct: 302 LTCISPTSAVIALGSEMSGGIEDVRAEDIVAIDSESGVRIKTGIGRGGYVKDIYVRRMTM 361
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
+ + GD G H D ++P+ALPV+ GI KD+ + ++G+ FT IC
Sbjct: 362 HTMKWAFWMTGDYGSHADKNYDPHALPVIQGINYKDMVVENATMAARLEGISGDTFTDIC 421
Query: 394 LSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSNHF 443
+SN+ + P C+D+ G QV P PC L + + F
Sbjct: 422 ISNVTIGLAPKAKKQPWTCTDIEGITSQVTPPPCDLLPDQGEEKITTCKF 471
>gi|30692538|gb|AAP33475.1| polygalacturonase-like protein [Fragaria x ananassa]
Length = 474
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/411 (47%), Positives = 265/411 (64%), Gaps = 3/411 (0%)
Query: 32 MRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLT 91
M R S+T+FGGVGDGKT NTKAF+ AI ++ GG L+VP G +LTGSF+LT
Sbjct: 41 MNCRAHSASLTEFGGVGDGKTSNTKAFQTAISKLSQYATDGGAQLFVPAGKWLTGSFSLT 100
Query: 92 SHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGEN 151
SH TLYL K +V+ A+QD WP++ LPSYGRGR+ GRY S I G L DV++TGEN
Sbjct: 101 SHFTLYLHKDSVLLASQDLNEWPVLKALPSYGRGRDAAAGRYSSLIFGTNLTDVIVTGEN 160
Query: 152 GTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVI 211
GTIDGQG WW + ++ L +TRP LIE M S I ISN+ NSP WN+HPVY SN+++
Sbjct: 161 GTIDGQGEFWWQQFHKKKLKYTRPYLIEIMFSSDIQISNLTLLNSPSWNVHPVYSSNIIV 220
Query: 212 RYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGIT 271
+ +TI+AP SPNTDGI+PDS +N IED YI +GDD VAVKSGWDEYGI++G P+ +
Sbjct: 221 QGITIIAPISSPNTDGINPDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGISFGMPTKQLV 280
Query: 272 IRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSD 330
IRR+T SP+S IA+GSE SGG+++V AE I N + +KT +GRG ++++I V
Sbjct: 281 IRRLTCISPYSATIALGSEMSGGIQDVRAEDIVAINTESAVRIKTAVGRGAYVKDIYVRR 340
Query: 331 VYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT 390
+ + + + G+ G H D ++ NA P + GI +DV V + ++G+ + PFT
Sbjct: 341 MTLHTMKWAFWMTGNYGSHADGNYDKNAFPEITGINYRDVVAENVTMAARLEGIADHPFT 400
Query: 391 GICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL--SSSQQTGAC 439
GIC+SN+ + P C+D+ G V P PC L + + G C
Sbjct: 401 GICMSNVTIGLAKKAKKQPWTCTDIQGITSGVTPTPCGLLPDQGTDKPGGC 451
>gi|449432134|ref|XP_004133855.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/410 (49%), Positives = 265/410 (64%), Gaps = 1/410 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R SIT+FGGVGDG T NTKAF+ A+ ++ GG LYVP G +LTGSFNLTSH
Sbjct: 62 RAHTASITEFGGVGDGVTSNTKAFQAAVEQLSQYTDDGGAQLYVPAGKWLTGSFNLTSHF 121
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL+L + AV+ A+QD WP++ PLPSYG GR+ GGRY+S I G L DVVITG NGTI
Sbjct: 122 TLFLHQDAVLLASQDPNEWPVVEPLPSYGHGRDTSGGRYISLIFGTNLTDVVITGNNGTI 181
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQG WW ++ Q L +TRP LIE M S I IS++ NSP WN+HPVY SN++I+ +
Sbjct: 182 DGQGDRWWQLFHQGKLKYTRPYLIELMYSSDIQISSLTLLNSPAWNVHPVYSSNILIQGI 241
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
TI+AP SPNTDGI+PDS +NV IED YI +GDD VAVKSGWDEYGI++G P+ + +RR
Sbjct: 242 TIIAPVRSPNTDGINPDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGISFGLPTKQLVVRR 301
Query: 275 VTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
+T SP S IA+GSE SGG+E+V AE I + G+ +KT IGRGG++++I V + M
Sbjct: 302 LTCISPTSAVIALGSEMSGGIEDVRAEDIVAIDSESGVRIKTGIGRGGYVKDIYVRRMTM 361
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
+ + GD G H D ++P+ALPV+ GI KD+ + ++G+ FT IC
Sbjct: 362 HTMKWAFWMTGDYGSHADKNYDPHALPVIQGINYKDMVVENATMAARLEGISGDTFTDIC 421
Query: 394 LSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSNHF 443
+SN+ + P C+D+ G QV P PC L + + F
Sbjct: 422 ISNVTIGLAPKAKKQPWTCTDIEGITSQVTPPPCDLLPDQGEEKITTCKF 471
>gi|356534963|ref|XP_003536020.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 456
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/400 (50%), Positives = 276/400 (69%), Gaps = 1/400 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R +SI +FG VGDGKTLNT AF+ A++ + GG LYVP G +LTGSFNLTSH+
Sbjct: 36 RPHSVSILEFGAVGDGKTLNTVAFQNAVFYAKSFADKGGAKLYVPSGKWLTGSFNLTSHL 95
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL+L +GA I A+QD +W + PLPSYGRG + P GRY S I+G L DVVITG+N I
Sbjct: 96 TLFLERGATIIASQDYAHWTAMDPLPSYGRGIDVPSGRYRSLIYGQNLSDVVITGDNAII 155
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQG++WW++ +L ++RP++IE + S +I ISN+ F NSP W+IHPVYCSNV I+ +
Sbjct: 156 DGQGSVWWDLIGTHSLNYSRPHIIELVGSDNITISNLTFLNSPAWSIHPVYCSNVQIQKI 215
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
T+ AP + P T GI PDSS +VCI +S ISTG D + +KSGWD+YG+AYG P+S + IR
Sbjct: 216 TVHAPTEFPYTSGIVPDSSEHVCIYNSNISTGHDAIVLKSGWDQYGVAYGKPTSKVHIRG 275
Query: 275 V-TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
V SS +G+A GSE SGG+ +++AE +++ N +GI +KT GRGG+++NI +SD +
Sbjct: 276 VYLQSSSGAGLAFGSEMSGGISDIIAEQLHITNSTIGIELKTTKGRGGYMKNIFISDAKL 335
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
EN GI + G G HPDDK++PNA+P V +T ++V GT + +G G+ +SPFT IC
Sbjct: 336 ENIYLGISMTGSSGSHPDDKYDPNAVPDVGNVTFENVIGTNIAIAGNFSGIVDSPFTPIC 395
Query: 394 LSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSS 433
L N + +SP CSD+ G + +V P PC +L ++
Sbjct: 396 LLNATFSSSSESSSPSWFCSDIMGISEEVFPEPCPDLQNT 435
>gi|343172553|gb|AEL98980.1| putative polygalacturonase, partial [Silene latifolia]
gi|343172555|gb|AEL98981.1| putative polygalacturonase, partial [Silene latifolia]
Length = 431
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/408 (50%), Positives = 259/408 (63%), Gaps = 4/408 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R IT+FG GDGKTLNTKAF+ A+ + L GG L VPPG +LTGSF+L SH
Sbjct: 7 RKHSAFITEFGAKGDGKTLNTKAFKTAVNFLSRLTHDGGAQLVVPPGRWLTGSFSLISHF 66
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TLYL +GAV+ A+QD +P++ PLPSYG+GR+ P GR+ S I G L DVVITG NGTI
Sbjct: 67 TLYLHQGAVLLASQDEKEYPILEPLPSYGKGRDAPAGRFASLIFGTNLTDVVITGANGTI 126
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQG WW ++ L TRP +IE M S + ISN+ NSP WN+HPVYC +V+IR +
Sbjct: 127 DGQGESWWKKYKSNELTQTRPYMIELMYSNGVQISNLTLLNSPNWNVHPVYCRDVIIRGL 186
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
TILAP SPNTDGIDPDS SNV IE +YI +GDD +A+KSGWDEYGI + P+ + IR
Sbjct: 187 TILAPTHSPNTDGIDPDSCSNVRIEHNYIVSGDDCIAIKSGWDEYGIRFNMPTQDVVIRH 246
Query: 275 VTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
+T SP S IA+GSE SGG++NV AEHI + GI VKT+ GRG F+RNI V + M
Sbjct: 247 LTCISPTSATIALGSEMSGGIQNVRAEHITAIDTESGIRVKTSPGRGAFVRNIYVRKMTM 306
Query: 334 ENARKGIKIAGDVGD---HPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT 390
+ + + G HPD +NP ALPV+ GI D+ V G ++G+K F
Sbjct: 307 KTMKYVFWMTGYYSSSRVHPDRHYNPRALPVIEGINYMDMVAANVSMPGYLEGIKEDVFK 366
Query: 391 GICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGA 438
GICLSN+ + P C+++ G A V P PC L S+ G
Sbjct: 367 GICLSNVTIGLAKKPKEMLWNCTNIEGVASGVTPQPCGFLRESKAMGC 414
>gi|356534105|ref|XP_003535598.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 475
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/397 (51%), Positives = 257/397 (64%), Gaps = 1/397 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R +TDFGGVGDGKT NTKAF+ AI ++ GG L VPPG +LTG FNLTSH
Sbjct: 48 RKHSAVLTDFGGVGDGKTSNTKAFQSAIRKLGQYASDGGAQLIVPPGKWLTGPFNLTSHF 107
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL+L K AVI A+Q WP + LPSYGRGR+ PGGR+ S I G L DVVITG NGTI
Sbjct: 108 TLFLHKDAVILASQVESEWPQLPVLPSYGRGRDAPGGRFSSLIFGTHLTDVVITGHNGTI 167
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQG+ WW+ + + L TRP +IE M S I ISN+ NSP W +HP+Y SN+ I+ +
Sbjct: 168 DGQGSYWWDKFHKNQLNLTRPYMIEIMYSDQIQISNLTLVNSPSWFVHPIYSSNITIKGL 227
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
TILAP DSPNTDGIDPDS +N IED YI +GDD VAVKSGWDEYGI +G P+ + IRR
Sbjct: 228 TILAPVDSPNTDGIDPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGKPTQHLVIRR 287
Query: 275 VTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
+T SP S IA+GSE SGG+++V E I N + +KT +GRGG++++I V + +
Sbjct: 288 LTCISPDSAMIALGSEMSGGIQDVRVEDITAINTQSAVRIKTAVGRGGYVKDIFVKGMTL 347
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
+ + G G HPD F+P ALP + GI +DV T V S ++G+ N PFTGIC
Sbjct: 348 STMKYVFWMTGSYGSHPDPAFDPKALPNITGINYRDVVATNVTYSAKLEGISNDPFTGIC 407
Query: 394 LSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 430
+SN+++Q C+DV+G V P C L
Sbjct: 408 ISNVSIQVSEQKKKLQWNCTDVAGVTSNVTPNTCQLL 444
>gi|449456478|ref|XP_004145976.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 480
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/406 (50%), Positives = 262/406 (64%), Gaps = 1/406 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R ITDFGGVGDG T NT+AFR AI + L GG L VPPG +LTGSFNLTSH
Sbjct: 50 RKHTALITDFGGVGDGVTSNTQAFRRAIEHLSSLAADGGAQLTVPPGKWLTGSFNLTSHF 109
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL++ K A I +Q+ WP +A LPSYG GR+ PGGRY S I G L DVVITG NGTI
Sbjct: 110 TLFVHKDAKILGSQNESEWPQVALLPSYGVGRDAPGGRYSSLIFGTNLTDVVITGNNGTI 169
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQGA WW+ + + L TRP LIE M S I IS++ NSP W +HP+Y NV+I+ +
Sbjct: 170 DGQGAYWWDKFHKGELNLTRPYLIEIMYSDQIQISDLTLVNSPSWFVHPIYSKNVIIQGL 229
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
TILAP DSPNTDGIDPDS SN IED +I +GDD +AVKSGWD+YGI +G P+ + I+R
Sbjct: 230 TILAPIDSPNTDGIDPDSCSNTRIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIKR 289
Query: 275 VTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
+T SP S G+A+GSE SGG+ NV E+ N + +KT GRGGF+++I V +Y+
Sbjct: 290 LTCISPDSAGVALGSEMSGGIRNVRIENFTGINTQSAVRIKTARGRGGFVKDIFVRGMYL 349
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
+ + G+ HPDDKF+P ALP + I +DV V S ++G+ PFT IC
Sbjct: 350 STMKYVFWMTGNYKSHPDDKFDPAALPEITNINYRDVVAENVTYSARLEGISGDPFTNIC 409
Query: 394 LSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGAC 439
+SN+ + A P C+DV G + V P PC+ L+ + ++G C
Sbjct: 410 ISNVKIGLTATPKKLQWNCTDVEGFSSDVVPPPCAPLAKAGKSGGC 455
>gi|358248902|ref|NP_001240215.1| uncharacterized protein LOC100785005 precursor [Glycine max]
gi|255635243|gb|ACU17976.1| unknown [Glycine max]
Length = 477
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/421 (48%), Positives = 264/421 (62%), Gaps = 3/421 (0%)
Query: 20 LASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVP 79
+A+ + C + R +TDFGGVGDGKT NTKAF+ AI + H GG LL VP
Sbjct: 34 VANGLDCFEYPAISCRKHSAVLTDFGGVGDGKTSNTKAFQYAISNLSHYASDGGALLVVP 93
Query: 80 PGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHG 139
PG +LTGSFNLTSH TL+L K A I +QD WP + LPSYGRGR+ P GR+ S I G
Sbjct: 94 PGKWLTGSFNLTSHFTLFLQKEATILGSQDESEWPTLPVLPSYGRGRDAPDGRFSSLIFG 153
Query: 140 DGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFW 199
L DV+ITG NGTIDGQG WW+ + + L TRP +IE M S I ISN+ NSP W
Sbjct: 154 TNLTDVIITGYNGTIDGQGCYWWDKFHKGELKLTRPYMIEIMFSDHIQISNLTLINSPSW 213
Query: 200 NIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEY 259
+HP+Y S+++I+ +TILAP DSPNTDGIDPDS SN+ IED YI +GDD VA+KSGWDEY
Sbjct: 214 FVHPIYTSDIIIQGLTILAPVDSPNTDGIDPDSCSNIRIEDCYIVSGDDCVAIKSGWDEY 273
Query: 260 GIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIG 318
GI +G PS I IRR+ SP S IA+GSE SGG+++V AE + N + +KT +G
Sbjct: 274 GIKFGMPSQHIIIRRLECVSPDSAMIALGSEMSGGIQDVRAEDLTAINTQSAVRIKTAVG 333
Query: 319 RGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQS 378
RG ++R+I + + + + + G HPD+ F+P LP + GI +DV V S
Sbjct: 334 RGAYVRDIFIKGMNLNTMKYVFWMTGSYSSHPDNGFDPKTLPNITGINYRDVIAENVTYS 393
Query: 379 GLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGA 438
++G+ N PFTGIC+SN+ + +G C+D+ G V P PC L Q+
Sbjct: 394 ARLEGIANDPFTGICISNVTIH--SGKKKLQWNCTDIEGVTSNVYPKPCELLPLKQEKIE 451
Query: 439 C 439
C
Sbjct: 452 C 452
>gi|411101510|gb|AFW04075.1| polygalacturonase [Litchi chinensis]
Length = 481
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/404 (50%), Positives = 260/404 (64%), Gaps = 1/404 (0%)
Query: 32 MRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLT 91
+ R +TDFGGVGDGKT NTKAFR AI ++ L GG L VPPG +LTGSFNLT
Sbjct: 49 LNCRKHSAVLTDFGGVGDGKTSNTKAFRSAIDKLSKLASDGGAALVVPPGKWLTGSFNLT 108
Query: 92 SHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGEN 151
SH TLY+ K AV+ +Q WP + LPSYGRGR+ GGR S I G L DVV+TG N
Sbjct: 109 SHFTLYIHKDAVLLGSQVESEWPRLPVLPSYGRGRDAAGGRLSSLIFGTNLTDVVVTGAN 168
Query: 152 GTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVI 211
GTIDGQGA WW +++ L TRP LIE M S + ISN+ F NSP WN+HP+Y SNV+I
Sbjct: 169 GTIDGQGAYWWGKFKKNQLDVTRPYLIEIMYSNQVQISNLTFVNSPSWNVHPIYSSNVII 228
Query: 212 RYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGIT 271
+ +TILAP DSPNTDGIDPDS +++ IED YI +GDD +AVKSGWD+YGI G P+ +
Sbjct: 229 QGLTILAPVDSPNTDGIDPDSCTDIRIEDCYIVSGDDCIAVKSGWDQYGIKVGMPTQRLV 288
Query: 272 IRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSD 330
IRRVT SP S IA+GSE SGG+ +V AE I + G+ +KT +GRGG++++I V
Sbjct: 289 IRRVTCISPDSATIALGSEMSGGIRDVRAEDITAIDTQSGVRIKTGVGRGGYVKDIYVRR 348
Query: 331 VYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT 390
+ M+ + + G G HPD F+P ALP ++GI +D+ V S + G+ N PF
Sbjct: 349 MTMKTMKYVFWMTGSYGQHPDPGFDPKALPDIHGINYRDMVAENVTYSARLDGIPNDPFK 408
Query: 391 GICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQ 434
GIC+ N+ + P C+DV G +V P CS L +
Sbjct: 409 GICIFNVTITLTKKPKELQWNCTDVQGVTSRVTPPACSLLPEKK 452
>gi|168046254|ref|XP_001775589.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673007|gb|EDQ59536.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 483
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/400 (50%), Positives = 267/400 (66%), Gaps = 2/400 (0%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
SI DFG VGDG TLNT AF A+ + + GG LY+P G +LTGS L SH+TL+L
Sbjct: 85 FSIIDFGAVGDGTTLNTHAFERAMLSLSNYADKGGAELYIPAGRWLTGSIRLISHLTLFL 144
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
GA I ++D ++PLI LPSYGRGRE PG RY S I+GDGL+DV+ITG NGTIDGQG
Sbjct: 145 ESGATILGSEDFNDYPLIPGLPSYGRGRELPGSRYSSLINGDGLEDVIITGNNGTIDGQG 204
Query: 159 AIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILA 218
A+WW+ +R +TL TR +L+E + ++ I+ISN+ FQNSPFW IHPVY NVV++ VTIL
Sbjct: 205 AVWWSSFRSKTLEHTRGHLLELIEAQDILISNLTFQNSPFWTIHPVYSKNVVVKRVTILN 264
Query: 219 PADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGS 278
P +SPNTDGIDPDSS VCIED YIS GDD +++KSGWD+YG +G PS I I+RV
Sbjct: 265 PLNSPNTDGIDPDSSQYVCIEDCYISVGDDAISIKSGWDQYGTGFGMPSKYIRIQRVVAF 324
Query: 279 SPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 337
S S GI+ GSE SGG+ ++ + + + N G+ KT++GRG +IRN+TV+++ M R
Sbjct: 325 SHTSAGISFGSEMSGGISDIEVDDMVITNSRWGVRFKTSVGRGAYIRNVTVNNIVMHTVR 384
Query: 338 KGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNI 397
I + G+ G+HPD+ +N A PV+ I + ++ G + Q+GL+ GL ++PF I L+ +
Sbjct: 385 TAIAVMGNYGEHPDENWNRTAYPVIENILVGNIVGENITQAGLLLGLPDAPFHDIHLTKV 444
Query: 398 NLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTG 437
L P CS V+G V P PC EL+ G
Sbjct: 445 VLD-TRTTKQGPWNCSWVTGFYNFVLPKPCPELTMENSNG 483
>gi|356501888|ref|XP_003519755.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 455
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/400 (49%), Positives = 275/400 (68%), Gaps = 2/400 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R +SI +FG VGDGKTLNT AF+ A++ + GG LYVP G +LTGSFNLTSH+
Sbjct: 36 RPHSVSILEFGAVGDGKTLNTVAFQNAVFYAKSFADKGGAKLYVPSGKWLTGSFNLTSHL 95
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL+L +GA I A+QD +W + PLPSYGRG + P GRY S I+G L DVVITG+NG I
Sbjct: 96 TLFLERGATIIASQDYAHWTAMDPLPSYGRGIDVPVGRYRSLIYGQNLSDVVITGDNGII 155
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQG++WW++ +L ++RP++IE + S +IIISN+ F NSP W+IHPVYCSN+ I+ +
Sbjct: 156 DGQGSVWWDLISTHSLNYSRPHIIELVGSDNIIISNLTFLNSPAWSIHPVYCSNIQIQKI 215
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
T+ AP P T GI PDSS +VCI++ ISTG D + +KSGWDEYG+AYG P+S + IR
Sbjct: 216 TVQAPTKFPYTSGIVPDSSEHVCIDNCNISTGHDAIVLKSGWDEYGVAYGKPTSNVHIRG 275
Query: 275 V-TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
V SS +G+A GSE SGG+ +++AE +++ N GI +KT GRGG+++NI +SD +
Sbjct: 276 VYLQSSSGAGLAFGSEMSGGISDIIAEQLHITNSTFGIELKTTRGRGGYMKNIFISDAKL 335
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
EN GI + G G HPDDK++PNA+P V +T ++V G + +G G+ +SPFT IC
Sbjct: 336 ENIYLGISMTGSSGSHPDDKYDPNAVPDVGNVTFENVIGANIAIAGNFSGIVDSPFTPIC 395
Query: 394 LSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSS 433
LSN+ + + CS+V G + +V P PC +L ++
Sbjct: 396 LSNVTFSTSSESSPSWF-CSNVMGISKEVFPEPCPDLQNT 434
>gi|356503915|ref|XP_003520745.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 497
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/400 (51%), Positives = 273/400 (68%), Gaps = 6/400 (1%)
Query: 32 MRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLT 91
+ R +SI +FG VGDG TLNT AF A++ ++ GG LYVP G +LTGSFNLT
Sbjct: 55 FKARPHSVSILEFGAVGDGITLNTVAFENAMFYLKSFADKGGAQLYVPSGKWLTGSFNLT 114
Query: 92 SHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGEN 151
SH+TL+L +GA+I A+QD +W ++ LPSYGRG GRY S I+G L DVVITG+N
Sbjct: 115 SHLTLFLERGAIIIASQDYSHWDIVDFLPSYGRGI----GRYRSLIYGQNLSDVVITGDN 170
Query: 152 GTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVI 211
GTIDGQG+IWW ++ +L ++RPNLIEF++S IIISN+ F +SP W IHPV+CSNV I
Sbjct: 171 GTIDGQGSIWWELFSSNSLNYSRPNLIEFVDSVDIIISNLTFLDSPAWGIHPVHCSNVQI 230
Query: 212 RYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGIT 271
+ +T APA+ P T GI PDSS VCIE+S ISTG D V +KSGWD+YGIAYG P+S +
Sbjct: 231 QNITSRAPAEFPYTSGIVPDSSRYVCIENSNISTGHDAVVLKSGWDQYGIAYGKPTSSVH 290
Query: 272 IRRV-TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSD 330
I V SS +G+A GSE SGG+ +++AE +++ N +GI +KT GRGG++R I +SD
Sbjct: 291 ISNVYLQSSSGAGLAFGSEMSGGISDIIAEKLHILNSPIGIELKTTKGRGGYMRGIFISD 350
Query: 331 VYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT 390
+EN GI + G G HPDDK++ +ALP+V IT K+V G + +G G+ SPF+
Sbjct: 351 AELENISLGISMTGYSGFHPDDKYDTSALPIVGDITFKNVIGANISVAGNFSGIVESPFS 410
Query: 391 GICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 430
ICLSN+ + P SP CS+V G + V P PC +L
Sbjct: 411 TICLSNVTFSLSSEP-SPSWFCSNVIGFSEDVIPEPCPDL 449
>gi|357504351|ref|XP_003622464.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355497479|gb|AES78682.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 479
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/397 (50%), Positives = 264/397 (66%), Gaps = 1/397 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R +S+ DFGGVGDGKT NTKAF+ AI + GG+ LYVP G +LTGSF+L SH
Sbjct: 51 RAHSVSLKDFGGVGDGKTSNTKAFKSAISHLSQNASEGGSQLYVPAGKWLTGSFSLISHF 110
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TLYL K AV+ A+QD WP+I PLPSYGRGR+ GR+ S I G L DV++TG+NGTI
Sbjct: 111 TLYLHKDAVLLASQDINEWPVIKPLPSYGRGRDAAAGRHTSLIFGTNLTDVIVTGDNGTI 170
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQG+ WW + + L +TRP LIE M S +I ISN+ +SP WNIHPVY SN++I+ +
Sbjct: 171 DGQGSFWWQQFHNKKLKYTRPYLIELMFSDNIQISNLTLLDSPSWNIHPVYSSNIIIKGI 230
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
TI+AP SPNTDGI+PDS +N IED YI +GDD VAVKSGWDEYGI +G P+ + IRR
Sbjct: 231 TIIAPIRSPNTDGINPDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRR 290
Query: 275 VTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
+T SP+S IA+GSE SGG+++V AE I + GI +KT +GRGG++++I V + M
Sbjct: 291 LTCISPYSATIALGSEMSGGIQDVRAEDITAVHTESGIRIKTAVGRGGYVKDIYVKKMTM 350
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
+ I G+ G H D +N +ALP + I +D+ V +G ++G+ N PFTGIC
Sbjct: 351 HTMKWAFWITGNYGSHADKNYNHSALPEIKNIHYRDMVADNVSMAGNLEGISNDPFTGIC 410
Query: 394 LSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 430
+SN+ + A P C+D+ G V P PC L
Sbjct: 411 ISNVTITMAAKAKKQPWTCNDIEGITSGVTPKPCDLL 447
>gi|449497436|ref|XP_004160401.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like
[Cucumis sativus]
Length = 480
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/406 (50%), Positives = 261/406 (64%), Gaps = 1/406 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R ITDFGGVGDG T NT+AFR AI + L GG L VP G +LTGSFNLTSH
Sbjct: 50 RKHTALITDFGGVGDGVTSNTQAFRRAIEHLSSLAADGGAQLTVPXGKWLTGSFNLTSHF 109
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL++ K A I +Q+ WP +A LPSYG GR+ PGGRY S I G L DVVITG NGTI
Sbjct: 110 TLFVHKDAKILGSQNESEWPQVALLPSYGVGRDAPGGRYSSLIFGTNLTDVVITGNNGTI 169
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQGA WW+ + + L TRP LIE M S I IS++ NSP W +HP+Y NV+I+ +
Sbjct: 170 DGQGAYWWDKFHKGELNLTRPYLIEIMYSDQIQISDLTLVNSPSWFVHPIYSKNVIIQGL 229
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
TILAP DSPNTDGIDPDS SN IED +I +GDD +AVKSGWD+YGI +G P+ + I+R
Sbjct: 230 TILAPIDSPNTDGIDPDSCSNTRIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIKR 289
Query: 275 VTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
+T SP S G+A+GSE SGG+ NV E+ N + +KT GRGGF+++I V +Y+
Sbjct: 290 LTCISPDSAGVALGSEMSGGIRNVRIENFTGINTQSAVRIKTARGRGGFVKDIFVRGMYL 349
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
+ + G+ HPDDKF+P ALP + I +DV V S ++G+ PFT IC
Sbjct: 350 STMKYVFWMTGNYKSHPDDKFDPAALPEITNINYRDVVAENVTYSARLEGISGDPFTNIC 409
Query: 394 LSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGAC 439
+SN+ + A P C+DV G + V P PC+ L+ + ++G C
Sbjct: 410 ISNVKIGLTATPKKLQWNCTDVEGFSSDVVPPPCAPLAKAGKSGGC 455
>gi|302783324|ref|XP_002973435.1| hypothetical protein SELMODRAFT_99190 [Selaginella moellendorffii]
gi|300159188|gb|EFJ25809.1| hypothetical protein SELMODRAFT_99190 [Selaginella moellendorffii]
Length = 468
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/443 (48%), Positives = 281/443 (63%), Gaps = 12/443 (2%)
Query: 4 FLVTLSILLSYFNCFSLASVVTCSG------IVPMRYRNDKISITDFGGVGDGKTLNTKA 57
FL+ ++ L F + + SG VP R R ++TDFGG+GDG+T+NT+A
Sbjct: 12 FLLWIAFFLCLF-VYQSNYIAQVSGSKRIARAVP-RLRPVVFNLTDFGGIGDGRTINTRA 69
Query: 58 FREAIYRIQHLR-RSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLI 116
F A+ I +SGG L VP GV+LT FNLTSHMTL+L + A I ATQ WPL+
Sbjct: 70 FERAVAEISSAAAKSGGAQLNVPAGVWLTAPFNLTSHMTLFLEEDATILATQSEDLWPLM 129
Query: 117 APLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPN 176
PLPSYGRGRE PG RY S IHG L+D+VITG NGTIDG G WW + + L TR
Sbjct: 130 QPLPSYGRGRELPGPRYGSLIHGQHLEDIVITGHNGTIDGNGRKWWEKAKLKQLKHTRGR 189
Query: 177 LIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNV 236
LI+FM SR I IS+V +NSPFW +HP C NV IR VTI+AP D+PNTDGIDPDS NV
Sbjct: 190 LIQFMWSRGIEISDVTLRNSPFWTVHPYDCENVTIRGVTIIAPPDAPNTDGIDPDSCRNV 249
Query: 237 CIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVE 295
IE+ YIS GDD VAVKSGWD+YGI YG P + ITIR + ++P S G+++GSE SGG+
Sbjct: 250 LIENCYISVGDDGVAVKSGWDQYGIDYGKPCANITIRNIQVNAPVSAGVSIGSEMSGGIT 309
Query: 296 NVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFN 355
NV E++ ++N G+ +KT GRGG++ + ++ ME R GI I D GDHPD+ ++
Sbjct: 310 NVTVENVYIWNSKRGVRIKTTPGRGGYVTQVFYRNITMETVRVGIVIKTDYGDHPDEFYD 369
Query: 356 PNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDV 415
P ALPVV I ++G++V+ I G K P G+ + ++N+ GV +CS +
Sbjct: 370 PTALPVVEKIFFDGIYGSEVRIPARIYGSKEVPVRGLEIRDMNV-GVTRKKKHVFQCSFL 428
Query: 416 SGSAY-QVKPWPCSELSSSQQTG 437
G + + P PC +L +S + G
Sbjct: 429 QGQVFGTIFPKPCEDLGTSSRPG 451
>gi|218186147|gb|EEC68574.1| hypothetical protein OsI_36908 [Oryza sativa Indica Group]
Length = 449
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/407 (48%), Positives = 272/407 (66%), Gaps = 2/407 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R ++IT+FG VGDGKTLNT F+ A++ + GG LYVP G +LTGSFNLTSH+
Sbjct: 31 RPHSVTITEFGAVGDGKTLNTLPFQNAVFYARSFADKGGAQLYVPKGRWLTGSFNLTSHL 90
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL+L + AVI T+D WP++ PLPSYG+G + PG R+ S I+G L DVVITG NG I
Sbjct: 91 TLFLEEEAVIIGTKDPSQWPIVEPLPSYGQGLDLPGPRHRSLINGYNLSDVVITGNNGVI 150
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQG++WW+ L +RP+++EF++S ++ISN+ F NSP W+IHPVYCSNV + V
Sbjct: 151 DGQGSVWWDWLHSHELNHSRPHIVEFLHSEEVVISNLTFLNSPAWSIHPVYCSNVKVHNV 210
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
TI D+P TDGI PDS SNVCIEDS IS G D +++KSGWD YGI++G P+S I I R
Sbjct: 211 TIKTSLDAPLTDGIVPDSCSNVCIEDSSISVGHDAISLKSGWDNYGISFGRPTSDIHISR 270
Query: 275 VT-GSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
V +S + +A+GSE SGG+ ++ +HI + + GI +T GRGG+I + V+DV M
Sbjct: 271 VDLQASSGAALAIGSEMSGGISDIHVDHIRIGSSSKGISFRTTPGRGGYIAEVVVADVVM 330
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
++ I+ G+ HPDD F+P+ LPV++ IT+K++ GT + +G++ G++ PF+ IC
Sbjct: 331 DSVHLAIEFTGNWSSHPDDHFDPSFLPVIDQITLKNMEGTNISVAGVLSGIEGDPFSAIC 390
Query: 394 LSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL-SSSQQTGAC 439
LSN+N S CS+V G + V P PCSEL +S + C
Sbjct: 391 LSNLNFSIADSAPSSAWTCSNVHGYSELVFPKPCSELHDTSTNSSIC 437
>gi|357443845|ref|XP_003592200.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355481248|gb|AES62451.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 481
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/402 (49%), Positives = 257/402 (63%), Gaps = 1/402 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R +TDFGGVGDGKTLNTKAF AI + GG L VPPG +LTGSFNLTSH
Sbjct: 52 RKHSAVLTDFGGVGDGKTLNTKAFNSAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHF 111
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL+L K +VI A+QD WP LPSYG GR GR+ S + G L DV+ITG NGTI
Sbjct: 112 TLFLQKDSVILASQDESEWPQFPVLPSYGSGRNASDGRFSSLVFGTNLTDVIITGNNGTI 171
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQG+ WW+ + + + TRP +IE M S I ISN+ NSP W +HPVY SN++I +
Sbjct: 172 DGQGSYWWDKFHKGQMKITRPYMIEIMYSDQIQISNLTLINSPSWFVHPVYSSNIIINGL 231
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
TILAP D PNTDGIDPDS +NV IED+YI +GDD +A+KSGWDEYGI +G PS I IRR
Sbjct: 232 TILAPVDIPNTDGIDPDSCTNVRIEDNYIVSGDDCIAIKSGWDEYGIKFGKPSQQIIIRR 291
Query: 275 VTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
+T SP S +A+GSE SGG+++V E + + +KT IGRG ++++I V + +
Sbjct: 292 LTCISPKSAMVALGSEMSGGIQDVRVEDVTAIKTESAVRIKTAIGRGAYVKDIFVKGMNL 351
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
+ + + G HPD+ F+PNALP ++ I +DV V +G + G+ N PFTGIC
Sbjct: 352 DTMKYVFWMTGSYKSHPDNGFDPNALPKISEINYRDVTAKNVTIAGKLDGISNDPFTGIC 411
Query: 394 LSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQ 435
+SN ++ A P C+DVSG V P PC L+ ++
Sbjct: 412 VSNATIEMSAHKKKLPWNCTDVSGVTSNVSPTPCELLAEKEK 453
>gi|356530824|ref|XP_003533980.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 476
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/417 (48%), Positives = 263/417 (63%), Gaps = 3/417 (0%)
Query: 20 LASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVP 79
+A+ + C + R +TDFGGVGDGKT NTKAF+ AI + H GG LL VP
Sbjct: 34 VANGLDCFEYPAISCRKHSAVLTDFGGVGDGKTSNTKAFQYAISNLSHYASDGGALLVVP 93
Query: 80 PGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHG 139
PG +LTGSFNLTSH TL+L K A I +QD WP + LPSYGRGR+ P GR+ S I G
Sbjct: 94 PGKWLTGSFNLTSHFTLFLQKEATILGSQDESEWPTLPVLPSYGRGRDAPDGRFSSLIFG 153
Query: 140 DGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFW 199
L DVVITG NGTIDGQG+ WW+ + + L TRP +IE M S I ISN+ +SP W
Sbjct: 154 TNLTDVVITGYNGTIDGQGSYWWDKFHKGELKLTRPYMIEIMFSDHIQISNLTLIDSPSW 213
Query: 200 NIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEY 259
+HP+Y S+++I+ +TILAP DSPNTDGI+PDS SN IED YI +GDD VA+KSGWDE
Sbjct: 214 FVHPIYSSDIIIQGLTILAPVDSPNTDGINPDSCSNTRIEDCYIVSGDDCVAIKSGWDES 273
Query: 260 GIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIG 318
GI +G PS I IRR+ SP S IA+GSE SGG+ +V AE + N + +KT +G
Sbjct: 274 GIKFGMPSQHIIIRRLECVSPDSAMIALGSEMSGGIRDVRAEELTALNTQSAVRIKTAVG 333
Query: 319 RGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQS 378
RG ++R+I V + + + + G G HP+ F+P ALP + GI +DV V S
Sbjct: 334 RGAYVRDIFVKGMNLNTMKYVFWMTGSYGSHPNTDFDPKALPNITGINYRDVIADNVTYS 393
Query: 379 GLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQ 435
++G+ N PFTGIC+SN+ + +G P C+D+ G V P PC L ++
Sbjct: 394 ARLEGIANDPFTGICISNVTIH--SGKKKPQWNCTDIEGVTSNVYPKPCELLPLKEK 448
>gi|115450425|ref|NP_001048813.1| Os03g0124900 [Oryza sativa Japonica Group]
gi|108705945|gb|ABF93740.1| polygalacturonase, putative, expressed [Oryza sativa Japonica
Group]
gi|113547284|dbj|BAF10727.1| Os03g0124900 [Oryza sativa Japonica Group]
gi|125584758|gb|EAZ25422.1| hypothetical protein OsJ_09236 [Oryza sativa Japonica Group]
Length = 458
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/405 (49%), Positives = 266/405 (65%), Gaps = 1/405 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R IT++GGVGDG+ NT AF +A+ + GG L VP G +LTG FNLTSH
Sbjct: 36 RKHVARITEYGGVGDGRRSNTAAFAKAVADLSLRAGDGGAALVVPKGKWLTGPFNLTSHF 95
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL+L GA I A+Q+ +WPLIAPLPSYGRGR+ PG RY +FI G L DV+ITG NGTI
Sbjct: 96 TLFLDHGAEILASQNLEDWPLIAPLPSYGRGRDEPGPRYSNFIAGSNLTDVIITGRNGTI 155
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
+GQG +WW+ + + L +TR L+E + S +IIISNV F +SP WN+HP YC+NV I +
Sbjct: 156 NGQGQVWWDKFHAKELTYTRGYLLELLYSNNIIISNVTFVDSPSWNLHPTYCTNVTISGI 215
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
TILAP +SPNTDGIDPDSSS+V IEDSYI +GDD +AVKSGWD+YGI + PS I IRR
Sbjct: 216 TILAPLNSPNTDGIDPDSSSHVKIEDSYIVSGDDCIAVKSGWDQYGIKFNMPSQHILIRR 275
Query: 275 VTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
+T SP S IA+GSE SGG+ +V A + + +K+ +GRGG+++++ V + +
Sbjct: 276 LTCISPTSAMIALGSEMSGGIRDVRAVDNVAIDTESAVRIKSGVGRGGYVKDVFVRGLSL 335
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
+ + G+ G HPD+ +PNALP V GI DV+ V +G ++G+ N P+TGIC
Sbjct: 336 HTMKWVFWMTGNYGQHPDNSSDPNALPEVTGINYSDVFAENVTMAGRMEGIPNDPYTGIC 395
Query: 394 LSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGA 438
+SN+ Q C+DV G A V P PC EL ++ + A
Sbjct: 396 MSNVTAQLAPDAKKLQWNCTDVKGVASDVSPVPCPELGAAGKPCA 440
>gi|115486511|ref|NP_001068399.1| Os11g0658800 [Oryza sativa Japonica Group]
gi|77552386|gb|ABA95183.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113645621|dbj|BAF28762.1| Os11g0658800 [Oryza sativa Japonica Group]
gi|222616379|gb|EEE52511.1| hypothetical protein OsJ_34717 [Oryza sativa Japonica Group]
Length = 449
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/407 (48%), Positives = 272/407 (66%), Gaps = 2/407 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R ++IT+FG VGDGKTLNT F+ A++ + GG LYVP G +LTGSFNLTSH+
Sbjct: 31 RPHSVTITEFGAVGDGKTLNTLPFQNAVFYARSFADKGGAQLYVPKGRWLTGSFNLTSHL 90
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL+L + AVI T+D WP++ PLPSYG+G + PG R+ S I+G L DVVITG NG I
Sbjct: 91 TLFLEEEAVIIGTKDPSQWPIVEPLPSYGQGLDLPGPRHRSLINGYNLSDVVITGNNGVI 150
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQG++WW+ L +RP+++EF++S ++ISN+ F NSP W+IHPVYCSNV + V
Sbjct: 151 DGQGSVWWDWLHSHELNHSRPHIVEFLHSEEVVISNLTFLNSPAWSIHPVYCSNVKVHNV 210
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
TI D+P TDGI PDS SNVCIEDS IS G D +++KSGWD YGI++G P+S I I R
Sbjct: 211 TIKTSLDAPLTDGIVPDSCSNVCIEDSSISVGHDAISLKSGWDNYGISFGRPTSDIHISR 270
Query: 275 VT-GSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
V +S + +A+GSE SGG+ ++ +HI + + GI +T GRGG+I + V+DV M
Sbjct: 271 VDLQASSGAALAIGSEMSGGISDIHVDHIRIGSSSKGISFRTTPGRGGYIAEVVVADVVM 330
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
++ I+ G+ HPDD F+P+ LPV++ IT+K++ GT + +G++ G++ PF+ IC
Sbjct: 331 DSVHLAIEFTGNWSSHPDDHFDPSFLPVIDQITLKNMEGTNISVAGVLSGIEGDPFSAIC 390
Query: 394 LSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL-SSSQQTGAC 439
LSN+N S CS+V G + V P PCSEL +S + C
Sbjct: 391 LSNLNFSIADLAPSSAWTCSNVHGYSELVFPKPCSELHDTSTNSSIC 437
>gi|302753776|ref|XP_002960312.1| hypothetical protein SELMODRAFT_74934 [Selaginella moellendorffii]
gi|300171251|gb|EFJ37851.1| hypothetical protein SELMODRAFT_74934 [Selaginella moellendorffii]
Length = 455
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/403 (49%), Positives = 264/403 (65%), Gaps = 3/403 (0%)
Query: 33 RYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTS 92
R R SI DFGGV DG TLNTKAF++AI I + GG LY+P G +LTG FNLTS
Sbjct: 53 RARPRVFSIADFGGVSDGITLNTKAFQKAIDHIGSFGKLGGATLYIPRGKWLTGCFNLTS 112
Query: 93 HMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENG 152
HMTL+L + A I A++D +WP++ PLPSYGRGRE PG RY S +HG + DV ITG NG
Sbjct: 113 HMTLFLEQDATILASEDPQDWPVVDPLPSYGRGRELPGKRYTSLLHGLRITDVAITGNNG 172
Query: 153 TIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIR 212
TIDGQG IWWN +R +TL TR +L+EFM S +I++ NV NSPFW +HPVY S+V+I+
Sbjct: 173 TIDGQGLIWWNRFRSKTLQHTRGSLVEFMFSSNILVHNVTLINSPFWTLHPVYTSDVMIK 232
Query: 213 YVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITI 272
VTILAP +PNTDG+DPDSSSNVCI D+YIS GDD VAVKSGWDEYG+A+ PS + +
Sbjct: 233 GVTILAPHKAPNTDGVDPDSSSNVCIRDTYISNGDDAVAVKSGWDEYGLAFNRPSHDVFL 292
Query: 273 RRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVY 332
+T S GI++GSE SGG+ NV A +++ GIH+KT+ GRG +IRN + +
Sbjct: 293 VNLTVSGS-HGISLGSEMSGGIYNVHAYGVSISGAVQGIHIKTSAGRGAYIRNASFASFE 351
Query: 333 MENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGI 392
+ + G GDHPD +N +A + I+ +DV G +V ++G +G+ SPF
Sbjct: 352 ILDTGVAFSFTGIYGDHPDAGYNASAFATIENISFRDVVGMRVNRAGDFRGVPQSPFRHT 411
Query: 393 CLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQ 435
C +++ L+ S CS + G + V P PC EL +
Sbjct: 412 CFTDVALE--LNGKSNHWNCSYIEGYSRHVSPPPCPELQLESE 452
>gi|302823943|ref|XP_002993619.1| hypothetical protein SELMODRAFT_137353 [Selaginella moellendorffii]
gi|300138547|gb|EFJ05311.1| hypothetical protein SELMODRAFT_137353 [Selaginella moellendorffii]
Length = 468
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/408 (50%), Positives = 267/408 (65%), Gaps = 4/408 (0%)
Query: 33 RYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLR-RSGGTLLYVPPGVYLTGSFNLT 91
R R ++TDFGG+GDG+T+NT+AF A+ I +SGG L VP GV+LT FNLT
Sbjct: 45 RLRPVVFNLTDFGGIGDGRTINTRAFERAVAEISSAAAKSGGAQLNVPAGVWLTAPFNLT 104
Query: 92 SHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGEN 151
SHMTL+L + A I ATQ WPL+ PLPSYGRGRE PG RY S IHG L+D+VITG N
Sbjct: 105 SHMTLFLEEDATILATQSEDLWPLMQPLPSYGRGRELPGPRYGSLIHGQHLEDIVITGHN 164
Query: 152 GTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVI 211
GTIDG G WW +++ L TR LI+ M SR I IS+V +NSPFW +HP C NV I
Sbjct: 165 GTIDGNGRKWWEKAKRKQLKHTRGRLIQLMWSRGIEISDVTLRNSPFWTVHPYDCENVTI 224
Query: 212 RYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGIT 271
R VTI+AP D+PNTDGIDPDS NV IE YIS GDD VAVKSGWD+YGI YG P + IT
Sbjct: 225 RGVTIIAPPDAPNTDGIDPDSCRNVLIESCYISVGDDGVAVKSGWDQYGIDYGKPCANIT 284
Query: 272 IRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSD 330
IR + ++P S G+++GSE SGG+ NV E++ ++N G+ +KT GRGG++ + +
Sbjct: 285 IRNIQVNAPVSAGVSIGSEMSGGITNVTVENVFIWNSKRGVRIKTTPGRGGYVTQVFYRN 344
Query: 331 VYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT 390
+ ME R GI I D GDHPD+ ++P ALPVV I ++G++V+ I G K P
Sbjct: 345 ITMETVRVGIVIKTDYGDHPDEFYDPTALPVVEKIFFDGIYGSEVRIPARIYGSKEVPVR 404
Query: 391 GICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTG 437
G+ + ++N+ GV +CS + G + + P PC +L +S + G
Sbjct: 405 GLEIRDMNV-GVTRKKKHVFQCSFLQGEVFGTIFPKPCEDLGTSTRPG 451
>gi|302767960|ref|XP_002967400.1| hypothetical protein SELMODRAFT_87398 [Selaginella moellendorffii]
gi|300165391|gb|EFJ31999.1| hypothetical protein SELMODRAFT_87398 [Selaginella moellendorffii]
Length = 426
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/398 (50%), Positives = 263/398 (66%), Gaps = 3/398 (0%)
Query: 33 RYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTS 92
R R SI DFGGV DG TLNTKAF++AI I + GG LY+P G +LTG FNLTS
Sbjct: 24 RARPRVFSIADFGGVSDGITLNTKAFQKAIDHIGSFGKLGGATLYIPRGKWLTGCFNLTS 83
Query: 93 HMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENG 152
HMTL+L + A I A++D +WP++ PLPSYGRGRE PG RY S +HG + DV ITG NG
Sbjct: 84 HMTLFLEQDATILASEDPQDWPVVDPLPSYGRGRELPGKRYTSLLHGLRITDVAITGNNG 143
Query: 153 TIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIR 212
TIDGQG +WWN +R +TL TR +L+EFM S +I++ NV NSPFW +HPVY S+V+I+
Sbjct: 144 TIDGQGLVWWNRFRSKTLQHTRGSLVEFMFSSNILVHNVTLINSPFWTLHPVYTSDVMIK 203
Query: 213 YVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITI 272
VTILAP +PNTDG+DPDSSSNVCI D+YIS GDD VAVKSGWDEYG+A+ PS + +
Sbjct: 204 GVTILAPHKAPNTDGVDPDSSSNVCIRDTYISNGDDAVAVKSGWDEYGLAFNRPSHDVFL 263
Query: 273 RRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVY 332
+T S GI++GSE SGG+ NV A +++ GIH+KT+ GRG +IRN + +
Sbjct: 264 VNLTVSGS-HGISLGSEMSGGIYNVHAYGVSISGAVQGIHIKTSAGRGAYIRNASFASFE 322
Query: 333 MENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGI 392
+ + G GDHPD +N +A + I+ +DV G +V ++G +G+ SPF
Sbjct: 323 ILDTGVAFSFTGIYGDHPDAGYNASAFATIENISFRDVVGMRVNRAGDFRGVPQSPFRHT 382
Query: 393 CLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 430
C +++ L+ S CS + G + V P PC EL
Sbjct: 383 CFTDVALE--LNGKSNHWNCSYIEGYSRHVSPPPCPEL 418
>gi|357443839|ref|XP_003592197.1| Endo-polygalacturonase-like protein [Medicago truncatula]
gi|355481245|gb|AES62448.1| Endo-polygalacturonase-like protein [Medicago truncatula]
Length = 475
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/427 (47%), Positives = 269/427 (62%), Gaps = 2/427 (0%)
Query: 10 ILLSYFNCFSLASVVTCS-GIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHL 68
IL+S C +S+ S + R +TDFG VGDGKTLNTKAF AI +
Sbjct: 25 ILVSLAECREPSSIKLNSFDYHAINCRKHNAVLTDFGAVGDGKTLNTKAFNSAITNLSQY 84
Query: 69 RRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRER 128
GG L VPPG +LTGSFNLTSH TL+L KGAVI A+QD WP ++ LPSYGR ++
Sbjct: 85 ANDGGAQLIVPPGKWLTGSFNLTSHFTLFLQKGAVILASQDESEWPKLSFLPSYGREKDA 144
Query: 129 PGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIII 188
P GR+ S I G L DVVITG NGTIDGQG+ WW+ ++++ L TRP +IE M S I I
Sbjct: 145 PDGRFSSLIFGTNLTDVVITGNNGTIDGQGSTWWDKFQKKQLKITRPYMIEIMYSDQIQI 204
Query: 189 SNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDD 248
SN+ NSP W +HP+Y SN++I +TILAP D PNTDGIDPDS +NV IED+YI +GDD
Sbjct: 205 SNLTLINSPNWFVHPIYSSNIIINRLTILAPVDVPNTDGIDPDSCTNVLIEDNYIVSGDD 264
Query: 249 LVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNV 307
+A+KSG D YGI G PS I +RR+T SP S +A+GSE SGG++++ E I N
Sbjct: 265 CIAIKSGLDGYGIKVGKPSQKIIVRRLTCISPKSAMVALGSEMSGGIQDIRIEDITAINT 324
Query: 308 GVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITI 367
+ +KT +GRG ++++I V + + + + G H ++ F+P ALP ++GI
Sbjct: 325 ESAVRIKTAVGRGAYVKDIFVKGMNLNTMKYVFWMTGAYKSHAENGFDPKALPKISGINY 384
Query: 368 KDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPC 427
+D+ V +G + G+ N PFTGIC+SN+ ++ A + P C+DVSG A P PC
Sbjct: 385 RDIIAKNVTIAGQLDGISNDPFTGICISNVTIEMSAQKNNLPWNCTDVSGVASNAVPKPC 444
Query: 428 SELSSSQ 434
L +
Sbjct: 445 DMLPEKK 451
>gi|186701252|gb|ACC91278.1| glycoside hydrolase family 28 protein [Capsella rubella]
Length = 494
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/396 (50%), Positives = 263/396 (66%), Gaps = 1/396 (0%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
S+ +FG VGDG T NTKAFR+A+ ++ GG+LL+VP G +LTG+FNLTSH TL+L
Sbjct: 68 SLDEFGAVGDGVTSNTKAFRDAVSQLSRFEDYGGSLLFVPAGRWLTGNFNLTSHFTLFLH 127
Query: 100 KGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGA 159
+ AVI A+Q+ ++ +I PLPSYGRGR+ GGR++S + G L DVVITGENGTIDGQG
Sbjct: 128 RDAVILASQEESDYEVIEPLPSYGRGRDTDGGRFISLLFGSNLTDVVITGENGTIDGQGE 187
Query: 160 IWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP 219
WW +++ L +TRP LIE M+S I ISN+ F NSP W+IHPVY N+ I+ +TILAP
Sbjct: 188 PWWGKFKRGELKYTRPYLIEIMHSDGIQISNLTFLNSPSWHIHPVYSRNIFIQGLTILAP 247
Query: 220 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS 279
PNTDGI+PDS +N IED YI +GDD +AVKSGWD+YGIAYG P+ + IRR+T S
Sbjct: 248 VTVPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDQYGIAYGMPTKQLLIRRLTCIS 307
Query: 280 PFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK 338
P S IA+GSE SGG+E+V AE I + GI +KT IGRGG+++++ V + M+ +
Sbjct: 308 PDSAVIALGSEMSGGIEDVRAEDIVAIDSESGIRIKTAIGRGGYVKDVYVRGMTMKTMKY 367
Query: 339 GIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNIN 398
+ G G HPD+ ++P ALPV+ I +D+ V + G+ FTGIC+SN+
Sbjct: 368 VFWMTGSYGSHPDEHYDPKALPVIQNINYQDMVAENVTMPAQLAGISGDQFTGICISNVT 427
Query: 399 LQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQ 434
+ P C+DVSG V P PC L Q
Sbjct: 428 ITLSKKPKKVLWNCTDVSGYTSGVTPAPCQLLPEKQ 463
>gi|255541678|ref|XP_002511903.1| polygalacturonase, putative [Ricinus communis]
gi|223549083|gb|EEF50572.1| polygalacturonase, putative [Ricinus communis]
Length = 472
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/408 (48%), Positives = 262/408 (64%), Gaps = 12/408 (2%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R SITDFGGVGDG T NTKAF++AI + GG+ L+VP G +LTGSF+LTSH
Sbjct: 50 RAHSASITDFGGVGDGITSNTKAFQDAIAHLSQYATDGGSQLFVPAGKWLTGSFSLTSHF 109
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL+L K AV+ +QD WPL+ PLPSYGRGR+ GRY S I G L D+++TG NGTI
Sbjct: 110 TLFLHKDAVLLGSQDLKEWPLLKPLPSYGRGRDAAAGRYSSLIFGTNLTDIIVTGNNGTI 169
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQGA WW +++ L +TRP LIE M S +I ISN+ NSP WN+HPVY SN++I+ +
Sbjct: 170 DGQGAFWWQQFKKGKLKYTRPYLIEIMYSDNIQISNLTLLNSPSWNVHPVYSSNILIQGI 229
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
TI+AP SPNTDGI+P D YI +GDD VAVKSGWDEYGIA+G P+ + IRR
Sbjct: 230 TIIAPVTSPNTDGINP---------DCYIISGDDCVAVKSGWDEYGIAFGMPTKQLVIRR 280
Query: 275 VTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
+T SP+S IA+GSE SGG+++V AE I + G+ +KT +GRGG++++I V + M
Sbjct: 281 LTCISPYSATIALGSEMSGGIQDVRAEDITAIHTESGVRIKTAVGRGGYVKDIYVKRMTM 340
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
+ + G+ G H D ++PNALPV+ GI +D+ V + ++G+ PF IC
Sbjct: 341 HTMKWAFWMTGNYGSHADKNYDPNALPVIEGINYRDMVADNVSMAARLEGISGDPFKQIC 400
Query: 394 LSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSS--QQTGAC 439
+SN+ + A P C+D+ G V P PC L ++ AC
Sbjct: 401 ISNVTIGMAAKAKKIPWTCTDIEGITTGVSPRPCDLLPDQGPEKLTAC 448
>gi|15236514|ref|NP_194081.1| putative polygalacturonase [Arabidopsis thaliana]
gi|3451075|emb|CAA20471.1| putative protein [Arabidopsis thaliana]
gi|7269198|emb|CAB79305.1| putative protein [Arabidopsis thaliana]
gi|23296346|gb|AAN13048.1| unknown protein [Arabidopsis thaliana]
gi|62320484|dbj|BAD95012.1| hypothetical protein [Arabidopsis thaliana]
gi|332659368|gb|AEE84768.1| putative polygalacturonase [Arabidopsis thaliana]
Length = 495
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/396 (50%), Positives = 261/396 (65%), Gaps = 1/396 (0%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
S+ +FG VGDG T NT AFR+A+ ++ GG+LL+VP G +LTG+FNLTSH TL+L
Sbjct: 69 SLDEFGAVGDGVTSNTAAFRDAVSQLSRFADYGGSLLFVPAGRWLTGNFNLTSHFTLFLH 128
Query: 100 KGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGA 159
+ AVI A+Q+ ++ +I PLPSYGRGR+ GGR++S + G L DVVITGENGTIDGQG
Sbjct: 129 RDAVILASQEESDYEVIEPLPSYGRGRDTDGGRFISLLFGSNLTDVVITGENGTIDGQGE 188
Query: 160 IWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP 219
WW +++ L +TRP LIE M+S I ISN+ F NSP W+IHPVY SN+ I+ +TILAP
Sbjct: 189 PWWGKFKRGELKYTRPYLIEIMHSDGIQISNLTFLNSPSWHIHPVYSSNIYIQGLTILAP 248
Query: 220 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS 279
PNTDGI+PDS +N IED YI +GDD +AVKSGWD+YGI YG P+ + IRR+T S
Sbjct: 249 VTVPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDQYGINYGMPTKQLLIRRLTCIS 308
Query: 280 PFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK 338
P S IA+GSE SGG+E+V AE I N GI +KT IGRGG+++++ V + M +
Sbjct: 309 PDSAVIALGSEMSGGIEDVRAEDIVAINSESGIRIKTAIGRGGYVKDVYVRGMTMMTMKY 368
Query: 339 GIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNIN 398
+ G G HPDD ++P ALPV+ I +D+ V + G+ FTGIC+SN+
Sbjct: 369 VFWMTGSYGSHPDDHYDPKALPVIQNINYQDMVAENVTMPAQLAGISGDQFTGICISNVT 428
Query: 399 LQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQ 434
+ P C+DVSG V P PC L Q
Sbjct: 429 ITLSKKPKKVLWNCTDVSGYTSGVTPQPCQLLPEKQ 464
>gi|297803786|ref|XP_002869777.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297315613|gb|EFH46036.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 494
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/396 (50%), Positives = 260/396 (65%), Gaps = 1/396 (0%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
S+ +FG VGDG T NT AFR+A+ ++ GG+LL+VP G +LTGSFNLTSH TL+L
Sbjct: 68 SLDEFGAVGDGVTSNTAAFRDAVSQLSRFADYGGSLLFVPAGRWLTGSFNLTSHFTLFLH 127
Query: 100 KGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGA 159
+ AVI A+Q+ ++ +I PLPSYGRGR+ GGR++S + G L DVVITGENGTIDGQG
Sbjct: 128 RDAVILASQEESDYEVIEPLPSYGRGRDTDGGRFISLLFGSNLTDVVITGENGTIDGQGE 187
Query: 160 IWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP 219
WW +++ L +TRP LIE M+S I ISN+ F NSP W+IHPVY N+ I+ +TILAP
Sbjct: 188 PWWGKFKRGELKYTRPYLIEIMHSDGIQISNLTFLNSPSWHIHPVYSRNIFIQSLTILAP 247
Query: 220 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS 279
PNTDGI+PDS +N IED YI +GDD +AVKSGWD+YGI YG P+ + IRR+T S
Sbjct: 248 VTVPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDQYGINYGMPTKQLLIRRLTCIS 307
Query: 280 PFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK 338
P S IA+GSE SGG+E+V AE I N GI +KT IGRGG+++++ V + M +
Sbjct: 308 PDSAVIALGSEMSGGIEDVRAEDIVAINSESGIRIKTAIGRGGYVKDVYVRGMTMNTMKY 367
Query: 339 GIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNIN 398
+ G G HPD+ ++P ALPV+ I +D+ V + G+ FTGIC+SN+
Sbjct: 368 VFWMTGSYGSHPDEHYDPKALPVIQNINYQDMVAENVTMPAQLAGISGDQFTGICISNVT 427
Query: 399 LQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQ 434
+ P C+DVSG V P PC L Q
Sbjct: 428 ITLSKKPKKVLWNCTDVSGYTSGVTPQPCQLLPEKQ 463
>gi|225464581|ref|XP_002273669.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 478
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/440 (47%), Positives = 273/440 (62%), Gaps = 7/440 (1%)
Query: 6 VTLSILLSYFNCFSLASVVTCSGIVPMRY-----RNDKISITDFGGVGDGKTLNTKAFRE 60
+ L++L+ F +A T S + P++Y R +TDFG GDGKT+NTKAF+
Sbjct: 15 IVLAVLILGLLSFRVAECQTSSFMEPIKYKALRCRKHSAVLTDFGATGDGKTINTKAFKS 74
Query: 61 AIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLP 120
AI + GG L VPPG +LTGSFNLTSH TLY+ K AVI QD +PLI LP
Sbjct: 75 AIDHLSQFADDGGAELIVPPGKWLTGSFNLTSHFTLYIDKDAVILGAQDESAYPLIEVLP 134
Query: 121 SYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEF 180
SYG GR+ GGR+ S I G L DVVITG NGT++GQG WW+ +R + TRP LIE
Sbjct: 135 SYGVGRDG-GGRHSSLIFGTNLTDVVITGGNGTLNGQGKYWWDKFRAKKYNDTRPYLIEI 193
Query: 181 MNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIED 240
M S + ISN+ +SP WN+HPVY NV+++ +TILAP DSPNTDGI+PDS V IED
Sbjct: 194 MYSNHVQISNLTLIDSPSWNVHPVYSRNVLVKDLTILAPIDSPNTDGINPDSCKKVRIED 253
Query: 241 SYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLA 299
+I +GDD +AVKSGWD+YG +G P+ + IRR+T SP S IA+GSE SGG++NV A
Sbjct: 254 CFIVSGDDCIAVKSGWDQYGYKFGMPTKDLLIRRLTCISPDSATIALGSEMSGGIKNVWA 313
Query: 300 EHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNAL 359
E I + GI +KT IGRGG++++I V + ++ + I GD G HPDD ++P AL
Sbjct: 314 EDITAIDTQSGIRIKTGIGRGGYVKDIYVRRMTVKTMKYVFWITGDYGSHPDDGWDPKAL 373
Query: 360 PVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSA 419
PV+ I +D+ V S + G+ PFTGIC+SN+ + P C++V+G
Sbjct: 374 PVIKNINYRDMVAENVTYSARLDGISGDPFTGICISNVTIGLTEKPKELQWNCTNVAGVT 433
Query: 420 YQVKPWPCSELSSSQQTGAC 439
QV P C L S + C
Sbjct: 434 SQVTPRSCDLLPPSDKVFNC 453
>gi|357118995|ref|XP_003561232.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 512
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/407 (48%), Positives = 266/407 (65%), Gaps = 11/407 (2%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRR-----SGGTLLYVPPGVYLTGSFN 89
R S+ +FGGVGDG T NT AFR A+ +HL + GG +LYVP G +LT FN
Sbjct: 69 REHTASLAEFGGVGDGTTSNTAAFRAAV---EHLSQYSGDGGGGGMLYVPAGRWLTAPFN 125
Query: 90 LTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITG 149
LTSH TL+L AVI A+Q+ WP+IAPLPSYGRGR+ GGRY S I G L DVVITG
Sbjct: 126 LTSHFTLFLHSDAVILASQNISEWPVIAPLPSYGRGRDHAGGRYTSLISGSNLTDVVITG 185
Query: 150 ENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNV 209
NGTIDGQGA WW+ ++ L +TR LIE M+S +I ISNV NSP WNIHPVY N+
Sbjct: 186 NNGTIDGQGATWWSKYKSGKLKYTRGYLIELMSSDTIFISNVTLLNSPAWNIHPVYSKNI 245
Query: 210 VIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSG 269
VI+ VTILAP SPNTDGI+PDS S V IED Y+ +GDD VA+KSGWDEYGIA G P+
Sbjct: 246 VIQGVTILAPTRSPNTDGINPDSCSQVRIEDCYVVSGDDCVAIKSGWDEYGIAAGIPTEH 305
Query: 270 ITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITV 328
+ +RR+T SP S +A+GSE SGGV +V E + + + +KT +GRG ++++I
Sbjct: 306 VIVRRLTCVSPTSALVAIGSEMSGGVRDVRIEDVAAVDTESAVRIKTAVGRGAYVKDIYA 365
Query: 329 SDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKV-QQSGLIQGLKNS 387
+ + ++ + GD HPDD ++ A+PVV G++ +DV T V +++ ++G+ +
Sbjct: 366 RRMTLTGMKRVFWMTGDYKSHPDDGYDKTAVPVVEGVSFQDVAATGVWKEAARMEGISGA 425
Query: 388 PFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQ 434
PF GIC++N+ ++ + P C+DV G + V P PC +L Q
Sbjct: 426 PFKGICMANVTME-MTKPRKVMWNCADVEGVSTGVTPAPCGQLQQKQ 471
>gi|326490848|dbj|BAJ90091.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/412 (49%), Positives = 268/412 (65%), Gaps = 12/412 (2%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRR-----SGGTLLYVPPGVYLTGSFN 89
R S+TDFGGVGDG T NT AFR+A+ +HL + GG +LYVP G +LT FN
Sbjct: 44 REHTASLTDFGGVGDGNTSNTAAFRKAV---EHLSQYSGEGGGGGMLYVPAGRWLTAPFN 100
Query: 90 LTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITG 149
LTSH TL+L AVI TQD WP+I PLPSYGRGR+ GGRY S + G L DVVITG
Sbjct: 101 LTSHFTLFLHADAVILGTQDVAQWPVIDPLPSYGRGRDHAGGRYASLVSGSNLTDVVITG 160
Query: 150 ENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNV 209
NGTIDGQGA WW+ ++ L +TR LIE M++ + ISNV NSP WNIHPVY N+
Sbjct: 161 NNGTIDGQGATWWSKYKSGKLKYTRGYLIELMHTDGVFISNVTLVNSPAWNIHPVYSRNI 220
Query: 210 VIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSG 269
V+ VTILAP SPNTDGI+PDS S V IED Y+ +GDD VA+KSGWDEYGIA G PS
Sbjct: 221 VVSGVTILAPVKSPNTDGINPDSCSQVRIEDCYVVSGDDCVAIKSGWDEYGIAVGMPSEH 280
Query: 270 ITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITV 328
I++RR+T SP S IA+GSE SGG+ +V AE I + +KT +GRG ++R++
Sbjct: 281 ISVRRLTCVSPTSAVIALGSEMSGGIRDVRAEDITAIGTESAVRIKTAVGRGAYVRDVYA 340
Query: 329 SDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKV-QQSGLIQGLKNS 387
+ ++ ++ + GD HPDD ++ A+PVV I+ +DV T V +++ +QG++ +
Sbjct: 341 RRMRLDGMKRVFWMTGDYKSHPDDGYDKAAVPVVENISYQDVVATGVWKEAARMQGIQGA 400
Query: 388 PFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGAC 439
PF GIC++N+ ++ + C+DV G + V P PC+ L + GAC
Sbjct: 401 PFKGICMANVTME-MTKERKVSWNCADVEGVSAGVTPAPCAPLQGTHG-GAC 450
>gi|297821649|ref|XP_002878707.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297324546|gb|EFH54966.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 477
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/434 (46%), Positives = 273/434 (62%), Gaps = 8/434 (1%)
Query: 4 FLVTLSILLSYFNCFSLASVVTCSGIVPMRY-----RNDKISITDFGGVGDGKTLNTKAF 58
F + + + +S F+ A + C G + Y R +T+FG VGDGKT NTKAF
Sbjct: 17 FCILVVLAISSFSMME-ARDLGCKGKTNIEYMALNCRKHTAVLTEFGAVGDGKTSNTKAF 75
Query: 59 REAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAP 118
+EAI ++ GG L VPPG +LTGSFNL+SH TL++ KGA I A+QD +P++AP
Sbjct: 76 KEAITKLAPKAADGGVQLIVPPGKWLTGSFNLSSHFTLFIQKGATILASQDESEYPVVAP 135
Query: 119 LPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLP-FTRPNL 177
LPSYG+GR+ G + S I G L DVVITG NGTI+GQG WW +R TRP
Sbjct: 136 LPSYGQGRDAAGPTFASLISGTNLTDVVITGNNGTINGQGKYWWVKYRSGGFKNITRPYT 195
Query: 178 IEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVC 237
IE M S+++ ISN+ +SP WNIHPVYC+NV+++ VTILAP DSPNTDGI+PDS +N
Sbjct: 196 IEIMFSQNVQISNITIIDSPAWNIHPVYCNNVIVKGVTILAPIDSPNTDGINPDSCTNTL 255
Query: 238 IEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVEN 296
IED Y+ +GDD +AVKSGWD++GI G P+ ++IRR+T SP S GIA+GSE SGG+++
Sbjct: 256 IEDCYVVSGDDCIAVKSGWDQFGIKVGMPTKQLSIRRLTCISPDSAGIALGSEMSGGIKD 315
Query: 297 VLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNP 356
V E I L I +KT +GRGG++++I M+ + ++G HP F+P
Sbjct: 316 VRIEDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGAYNQHPASGFDP 375
Query: 357 NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVS 416
A+P + I +D+ V Q + G KN PFT IC+SNI + A P C+++S
Sbjct: 376 KAMPEITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEPKKLLWNCTNIS 435
Query: 417 GSAYQVKPWPCSEL 430
G + +V P PCS L
Sbjct: 436 GVSSKVTPKPCSLL 449
>gi|116831111|gb|ABK28510.1| unknown [Arabidopsis thaliana]
Length = 478
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/433 (47%), Positives = 272/433 (62%), Gaps = 4/433 (0%)
Query: 2 FRFLVTLSIL-LSYFNCFSLASV-VTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFR 59
F LV L+I S LAS T + + R +T+FG VGDGKT NTKAF+
Sbjct: 17 FCILVVLAISSFSMMEARDLASKGKTNIEYMALNCRKHTAVLTEFGAVGDGKTSNTKAFK 76
Query: 60 EAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPL 119
EAI ++ GG L VPPG +LTGSFNLTSH TL++ KGA I A+QD +P++APL
Sbjct: 77 EAITKLAPKAADGGVQLIVPPGKWLTGSFNLTSHFTLFIQKGATILASQDESEYPVVAPL 136
Query: 120 PSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLP-FTRPNLI 178
PSYG+GR+ G + S I G L DVVITG NGTI+GQG WW +R TRP I
Sbjct: 137 PSYGQGRDAAGPTFASLISGTNLTDVVITGNNGTINGQGKYWWVKYRSGGFKGITRPYTI 196
Query: 179 EFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCI 238
E + S+++ ISN+ +SP WNIHPVYC+NV+++ VTILAP DSPNTDGI+PDS +N I
Sbjct: 197 EIIFSQNVQISNITIIDSPAWNIHPVYCNNVIVKGVTILAPIDSPNTDGINPDSCTNTLI 256
Query: 239 EDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENV 297
ED Y+ +GDD +AVKSGWD++GI G P+ ++IRR+T SP S GIA+GSE SGG+++V
Sbjct: 257 EDCYVVSGDDCIAVKSGWDQFGIKVGMPTQQLSIRRLTCISPDSAGIALGSEMSGGIKDV 316
Query: 298 LAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPN 357
E I L I +KT +GRGG++++I M+ + ++G HP F+P
Sbjct: 317 RIEDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGAYNQHPASGFDPK 376
Query: 358 ALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSG 417
A+PV+ I +D+ V Q + G KN PFT IC+SNI + A P C+ +SG
Sbjct: 377 AMPVITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEPKKLLWNCTSISG 436
Query: 418 SAYQVKPWPCSEL 430
+ +V P PCS L
Sbjct: 437 VSSKVTPKPCSLL 449
>gi|42569272|ref|NP_179968.2| Pectin lyase-like protein [Arabidopsis thaliana]
gi|91806252|gb|ABE65854.1| glycoside hydrolase family 28 protein/polygalacturonase family
protein [Arabidopsis thaliana]
gi|330252406|gb|AEC07500.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 477
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/433 (47%), Positives = 272/433 (62%), Gaps = 4/433 (0%)
Query: 2 FRFLVTLSIL-LSYFNCFSLASV-VTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFR 59
F LV L+I S LAS T + + R +T+FG VGDGKT NTKAF+
Sbjct: 17 FCILVVLAISSFSMMEARDLASKGKTNIEYMALNCRKHTAVLTEFGAVGDGKTSNTKAFK 76
Query: 60 EAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPL 119
EAI ++ GG L VPPG +LTGSFNLTSH TL++ KGA I A+QD +P++APL
Sbjct: 77 EAITKLAPKAADGGVQLIVPPGKWLTGSFNLTSHFTLFIQKGATILASQDESEYPVVAPL 136
Query: 120 PSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLP-FTRPNLI 178
PSYG+GR+ G + S I G L DVVITG NGTI+GQG WW +R TRP I
Sbjct: 137 PSYGQGRDAAGPTFASLISGTNLTDVVITGNNGTINGQGKYWWVKYRSGGFKGITRPYTI 196
Query: 179 EFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCI 238
E + S+++ ISN+ +SP WNIHPVYC+NV+++ VTILAP DSPNTDGI+PDS +N I
Sbjct: 197 EIIFSQNVQISNITIIDSPAWNIHPVYCNNVIVKGVTILAPIDSPNTDGINPDSCTNTLI 256
Query: 239 EDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENV 297
ED Y+ +GDD +AVKSGWD++GI G P+ ++IRR+T SP S GIA+GSE SGG+++V
Sbjct: 257 EDCYVVSGDDCIAVKSGWDQFGIKVGMPTQQLSIRRLTCISPDSAGIALGSEMSGGIKDV 316
Query: 298 LAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPN 357
E I L I +KT +GRGG++++I M+ + ++G HP F+P
Sbjct: 317 RIEDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGAYNQHPASGFDPK 376
Query: 358 ALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSG 417
A+PV+ I +D+ V Q + G KN PFT IC+SNI + A P C+ +SG
Sbjct: 377 AMPVITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEPKKLLWNCTSISG 436
Query: 418 SAYQVKPWPCSEL 430
+ +V P PCS L
Sbjct: 437 VSSKVTPKPCSLL 449
>gi|242071887|ref|XP_002451220.1| hypothetical protein SORBIDRAFT_05g025980 [Sorghum bicolor]
gi|241937063|gb|EES10208.1| hypothetical protein SORBIDRAFT_05g025980 [Sorghum bicolor]
Length = 448
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/402 (48%), Positives = 270/402 (67%), Gaps = 1/402 (0%)
Query: 30 VPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFN 89
P R ++IT+FG VGDG+TLNT F+ A++ ++ GG LYVP G +LTGSFN
Sbjct: 25 APPGSRPHSVTITEFGAVGDGRTLNTVPFQNAVFYVRSFADKGGAQLYVPRGRWLTGSFN 84
Query: 90 LTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITG 149
LTSH+T+YL +GAVI +D+ WP++ PLPSYG+G + PG R+ S I+G L DVVITG
Sbjct: 85 LTSHLTIYLEQGAVIVGAKDSSQWPIVEPLPSYGQGTDLPGPRHRSLINGYNLTDVVITG 144
Query: 150 ENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNV 209
NG IDGQG +WW L +RP+L+EF+ S I+ISN+ F NSP W+IHPVYCSNV
Sbjct: 145 NNGVIDGQGLVWWQWLLSHELNHSRPHLLEFLYSEDIVISNLTFLNSPAWSIHPVYCSNV 204
Query: 210 VIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSG 269
+ VTI D+P TDGI PDS SN+CIEDS IS + +++KSGWD+YGI++G P+S
Sbjct: 205 KVHNVTIETSLDAPLTDGIVPDSCSNLCIEDSTISVSHEAISLKSGWDKYGISFGRPTSD 264
Query: 270 ITIRRVT-GSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITV 328
I I RV SS + +A GSE SGG+ ++ H+ +++ GI KT+ GRGG+I + +
Sbjct: 265 IHISRVDLLSSSGAALAFGSEMSGGISDIHVNHLRIHDSYKGISFKTSPGRGGYIEEVII 324
Query: 329 SDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSP 388
S+V MEN GI+ G+ HPDD F+ + LP ++ +T+K++ GT + +G++ G+ N+P
Sbjct: 325 SEVQMENVHVGIEFTGNCSTHPDDSFDLSDLPTIDQVTMKNMVGTNISVAGVLSGIDNAP 384
Query: 389 FTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 430
FT ICLSN+N A S CS+VSG + V P PC+EL
Sbjct: 385 FTAICLSNLNFSMAADTGSSSWSCSNVSGYSEAVFPEPCTEL 426
>gi|3738338|gb|AAC63679.1| putative polygalacturonase [Arabidopsis thaliana]
Length = 466
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/433 (47%), Positives = 272/433 (62%), Gaps = 4/433 (0%)
Query: 2 FRFLVTLSIL-LSYFNCFSLASV-VTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFR 59
F LV L+I S LAS T + + R +T+FG VGDGKT NTKAF+
Sbjct: 6 FCILVVLAISSFSMMEARDLASKGKTNIEYMALNCRKHTAVLTEFGAVGDGKTSNTKAFK 65
Query: 60 EAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPL 119
EAI ++ GG L VPPG +LTGSFNLTSH TL++ KGA I A+QD +P++APL
Sbjct: 66 EAITKLAPKAADGGVQLIVPPGKWLTGSFNLTSHFTLFIQKGATILASQDESEYPVVAPL 125
Query: 120 PSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLP-FTRPNLI 178
PSYG+GR+ G + S I G L DVVITG NGTI+GQG WW +R TRP I
Sbjct: 126 PSYGQGRDAAGPTFASLISGTNLTDVVITGNNGTINGQGKYWWVKYRSGGFKGITRPYTI 185
Query: 179 EFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCI 238
E + S+++ ISN+ +SP WNIHPVYC+NV+++ VTILAP DSPNTDGI+PDS +N I
Sbjct: 186 EIIFSQNVQISNITIIDSPAWNIHPVYCNNVIVKGVTILAPIDSPNTDGINPDSCTNTLI 245
Query: 239 EDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENV 297
ED Y+ +GDD +AVKSGWD++GI G P+ ++IRR+T SP S GIA+GSE SGG+++V
Sbjct: 246 EDCYVVSGDDCIAVKSGWDQFGIKVGMPTQQLSIRRLTCISPDSAGIALGSEMSGGIKDV 305
Query: 298 LAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPN 357
E I L I +KT +GRGG++++I M+ + ++G HP F+P
Sbjct: 306 RIEDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGAYNQHPASGFDPK 365
Query: 358 ALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSG 417
A+PV+ I +D+ V Q + G KN PFT IC+SNI + A P C+ +SG
Sbjct: 366 AMPVITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEPKKLLWNCTSISG 425
Query: 418 SAYQVKPWPCSEL 430
+ +V P PCS L
Sbjct: 426 VSSKVTPKPCSLL 438
>gi|359490611|ref|XP_002273143.2| PREDICTED: probable polygalacturonase-like, partial [Vitis
vinifera]
Length = 432
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/407 (48%), Positives = 265/407 (65%), Gaps = 2/407 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R +T+FGG+GDGKT NTKAF+ AI ++ GG L VPPG +LTGSFNLTSH
Sbjct: 2 RKHSALLTEFGGIGDGKTSNTKAFKTAIDHLKQFATDGGAELIVPPGKWLTGSFNLTSHF 61
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TLY+ K AVI +Q+ ++P I PLPSYG+GR+ GGR+ S I G L DVVI G NGTI
Sbjct: 62 TLYIHKDAVILGSQEESDYPHIPPLPSYGKGRDG-GGRFSSLIFGTNLTDVVIIGGNGTI 120
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
+GQG +WW+ ++Q+ L TRP LIE M S + ISN+ +SP WN+HPVYCS+V+I+ +
Sbjct: 121 NGQGRVWWDKFKQKKLVDTRPYLIEIMFSDQVQISNLTLIDSPSWNVHPVYCSDVIIQGM 180
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
TILAP D PNTDGI+PDS +NV IED YI +GDD +AVKSGWD+YGI YG P+ I IRR
Sbjct: 181 TILAPVDVPNTDGINPDSCANVKIEDCYIVSGDDCIAVKSGWDQYGIKYGVPTRDIVIRR 240
Query: 275 VTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
+T SP S IA+GSE SGG++NV AE I N G+ +KT +GRGG++++I + M
Sbjct: 241 LTCISPDSAVIALGSEMSGGIKNVRAEDITAINSQSGVRIKTGVGRGGYVQDIYARKMTM 300
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
+ + + D G HPDD+++ A+P + I ++V V S + G+ FTGIC
Sbjct: 301 KTMKYVFWMTSDYGSHPDDEWDRKAIPKIENINYREVVAENVTYSARLDGIAGDKFTGIC 360
Query: 394 LSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACS 440
+S++ ++ P C++V G QV P C L S+ C+
Sbjct: 361 ISDVTIRLTQKPKQLQWNCTNVEGVTSQVTPQSCDLLPPSKGPLQCT 407
>gi|359490609|ref|XP_002273177.2| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 465
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/443 (46%), Positives = 274/443 (61%), Gaps = 12/443 (2%)
Query: 1 MFRFLVTLSILLSYFNCFSLASVVTCSGIVPMRY---RNDKISITDFGGVGDGKTLNTKA 57
+FRF V + + L L S V G R R +TDFG GDGKT+NTKA
Sbjct: 12 LFRFHVLVVVGL-------LMSSVRGGGSEEYRAINCRKHSAVLTDFGAKGDGKTMNTKA 64
Query: 58 FREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIA 117
F+ AI + + GG L VPPG +LTGSFNLTSH TL++ K AVI QD +PLI
Sbjct: 65 FKSAIANLSQVAGDGGAQLIVPPGKWLTGSFNLTSHFTLFVHKDAVILGAQDEAAYPLIE 124
Query: 118 PLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNL 177
LPSYG GR+ GGR+ S I G L DVVITG NGTI GQG WW+ +R L TRP L
Sbjct: 125 ILPSYGAGRDG-GGRHASLIFGTNLTDVVITGGNGTIHGQGQYWWDKFRADKLKDTRPYL 183
Query: 178 IEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVC 237
IE M S + ISN+I +SP WN+HP Y SNV+I+++TI+AP SPNTDGI+PDSS NV
Sbjct: 184 IEIMYSDQVQISNLILIDSPSWNVHPTYSSNVIIQWLTIIAPVGSPNTDGINPDSSKNVL 243
Query: 238 IEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVEN 296
IED +I +GDD +AVKSGWD+YGI +G P+ + IRR+T SP S IA+GSE SGG++N
Sbjct: 244 IEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLIIRRLTCISPDSAVIALGSEMSGGIKN 303
Query: 297 VLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNP 356
V AE+I + G+ +K+ +GRGG++++I + M+ + + GD G HPDD ++P
Sbjct: 304 VRAENITAIDSESGVRIKSGVGRGGYVKDIYARGMTMKTMKYVFWMTGDYGQHPDDGWDP 363
Query: 357 NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVS 416
ALP + I +D+ V S + G+ PFTGIC+SN+ + P C++V
Sbjct: 364 KALPKIENINYRDMVAENVTYSARLDGISGDPFTGICISNVKIGLTEKPKKLQWNCTNVE 423
Query: 417 GSAYQVKPWPCSELSSSQQTGAC 439
G + QV P C L S++ C
Sbjct: 424 GVSSQVTPPSCDLLHPSKKVFNC 446
>gi|357151266|ref|XP_003575734.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 457
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/445 (45%), Positives = 285/445 (64%), Gaps = 7/445 (1%)
Query: 2 FRFLVTLSILLSYFNCFSLASVVTCSG-----IVPMRYRNDKISITDFGGVGDGKTLNTK 56
RFLV + + L+ L S + G P R ++IT+FG VG+G+TLNT
Sbjct: 1 MRFLVLVDVFLALTLAVVLGSAHSGGGRQWREQAPPGSRPHSVTITEFGAVGNGRTLNTL 60
Query: 57 AFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLI 116
F+ A++ + GG LYVP G +LTGSFNLTSH+TL+L +GAVI +++ WP++
Sbjct: 61 PFQNAVFYARSFADKGGAQLYVPKGRWLTGSFNLTSHLTLFLEEGAVIIGAKESSQWPIV 120
Query: 117 APLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPN 176
PLPSYG+G + PG R++S I+G + DVVITG NG I+GQG+IWW+ L +RP+
Sbjct: 121 EPLPSYGQGLDLPGPRHLSLINGYNVTDVVITGNNGVINGQGSIWWDWLHSHELNHSRPH 180
Query: 177 LIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNV 236
L+EF++S I+ISN+ F NSP W+IHPVYCS V + VTI +D+P TDGI PDSSSNV
Sbjct: 181 LVEFLHSEEIVISNLTFLNSPAWSIHPVYCSKVKVHNVTIKTSSDAPLTDGIVPDSSSNV 240
Query: 237 CIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRV-TGSSPFSGIAVGSETSGGVE 295
IEDS IS D +++KSGWD+YGI+ G P+S I I R+ +S + +A GSE SGG+
Sbjct: 241 VIEDSTISVSHDAISIKSGWDKYGISIGKPASDIHISRMDLQASSGAALAFGSEMSGGIS 300
Query: 296 NVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFN 355
++ A++I ++ GI KT GRGG+I + +SDV M++ I+ G+ HPD+ F+
Sbjct: 301 DIHADNIQIHGSNKGISFKTTPGRGGYIDEVVISDVKMDDVIVAIEFTGNWSSHPDEDFD 360
Query: 356 PNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDV 415
P+ LPV+ IT+KD+ GT + +G++ G+ PFT ICLSN+N S CS+V
Sbjct: 361 PSQLPVIGQITLKDMVGTNISVAGVLSGIDGDPFTAICLSNVNFLMAESAHSSSWSCSNV 420
Query: 416 SGSAYQVKPWPCSELSS-SQQTGAC 439
SG + V P PCSEL + S + C
Sbjct: 421 SGYSESVFPEPCSELHTPSSNSSMC 445
>gi|356565756|ref|XP_003551103.1| PREDICTED: probable polygalacturonase-like isoform 2 [Glycine max]
Length = 491
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/415 (47%), Positives = 261/415 (62%), Gaps = 4/415 (0%)
Query: 30 VPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFN 89
+PM R ++TDFGGVGDG TLNT+AF A+ + + GG L VPPG +LT FN
Sbjct: 66 MPM-LRPMAFNLTDFGGVGDGVTLNTEAFERAVSAVSKFGKKGGAQLNVPPGRWLTAPFN 124
Query: 90 LTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITG 149
LTSHMTL+LA+ AVI D WPL+ PLPSYG GRE PG RY S IHG L+DVVITG
Sbjct: 125 LTSHMTLFLAEDAVILGIDDEKYWPLMPPLPSYGYGREHPGPRYGSLIHGQHLKDVVITG 184
Query: 150 ENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNV 209
NGTI+GQG WW +RQ+ L TR L++ M S I+I+N+ ++SPFW IHP C N+
Sbjct: 185 HNGTINGQGQSWWKKYRQKRLNHTRGPLVQIMFSSDIVITNITLRDSPFWTIHPYDCKNI 244
Query: 210 VIRYVTILAPA-DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 268
I+ VTILAP +PNTDGIDPDS ++ IED YIS GDD +AVKSGWD+YGI YG PS
Sbjct: 245 TIKGVTILAPVFGAPNTDGIDPDSCEDMLIEDCYISVGDDAIAVKSGWDQYGIDYGRPSM 304
Query: 269 GITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITV 328
I IR + S+PF+GI++GSE SGGV NV E++ +++ G+ +KT GRG ++R IT
Sbjct: 305 NIMIRNLVKSTPFAGISIGSEMSGGVSNVTVENLLIWDSRRGVRIKTAPGRGAYVRQITY 364
Query: 329 SDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSP 388
++ EN R GI + D +HPDD ++P ALP++ I+ V G V+ I G + P
Sbjct: 365 RNITFENVRVGIVMKTDYNEHPDDGYDPLALPILRDISFTTVHGQGVRVPVRIHGSEEIP 424
Query: 389 FTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTGACSNH 442
+ ++++ G+ +C+ V G + P PC L + G H
Sbjct: 425 VRNVTFKDMSV-GLTYKKKHIFQCAFVQGRVIGTIYPAPCENLDRYNEQGQLVKH 478
>gi|115489012|ref|NP_001066993.1| Os12g0554800 [Oryza sativa Japonica Group]
gi|113649500|dbj|BAF30012.1| Os12g0554800, partial [Oryza sativa Japonica Group]
Length = 424
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/399 (48%), Positives = 266/399 (66%), Gaps = 1/399 (0%)
Query: 33 RYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTS 92
R R ++I++FG VGDG T+NT F+ AI+ ++ GG LYVP G +LTGSFNLTS
Sbjct: 4 RPRPHSVTISEFGAVGDGVTVNTLPFQNAIFYLRSFADKGGAQLYVPRGRWLTGSFNLTS 63
Query: 93 HMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENG 152
H+T++L K AVI ++ WP++ PLPSYG+G + PG R+ S I+G + DVVITG NG
Sbjct: 64 HLTIFLEKDAVIIGAKEVSEWPIVEPLPSYGQGIDLPGARHRSLINGHNVTDVVITGNNG 123
Query: 153 TIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIR 212
IDGQG WWN +R L ++RP+L+EF++S I+ISN+ NSP W IHPV+CSNV++
Sbjct: 124 IIDGQGLTWWNWFRSNKLNYSRPHLVEFVDSEDIVISNLTLLNSPAWGIHPVFCSNVMVH 183
Query: 213 YVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITI 272
VTI D+P TDGI PDS SN+CIEDS IS D +++KSGWD YGI G P+S I I
Sbjct: 184 DVTIRTSLDAPLTDGIVPDSCSNMCIEDSSISVAHDAISLKSGWDNYGITIGRPASDIHI 243
Query: 273 RRVTGSSPF-SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDV 331
RV + + +A GSE SGG+ ++ +H+N++ GI KT GRGG+IR++ +SDV
Sbjct: 244 SRVDLQASLGAALAFGSEMSGGISDIHVDHLNIHGSSRGILFKTAPGRGGYIRDVVISDV 303
Query: 332 YMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTG 391
ME+ IK GD HPD+ F+P+ALP++N IT+K++ GT + +G++ G+ PFT
Sbjct: 304 QMEDVNVAIKFTGDWSTHPDNHFDPSALPMINRITLKNMVGTNISVAGVLSGINGDPFTN 363
Query: 392 ICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 430
ICLSNI+ S CS++SG + V P PC +L
Sbjct: 364 ICLSNISFSLADSTQSSSWSCSNISGYSELVFPEPCPDL 402
>gi|108862809|gb|ABA99544.2| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|222617271|gb|EEE53403.1| hypothetical protein OsJ_36464 [Oryza sativa Japonica Group]
Length = 457
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/394 (48%), Positives = 264/394 (67%), Gaps = 1/394 (0%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
++I++FG VGDG T+NT F+ AI+ ++ GG LYVP G +LTGSFNLTSH+T++
Sbjct: 42 SVTISEFGAVGDGVTVNTLPFQNAIFYLRSFADKGGAQLYVPRGRWLTGSFNLTSHLTIF 101
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
L K AVI ++ WP++ PLPSYG+G + PG R+ S I+G + DVVITG NG IDGQ
Sbjct: 102 LEKDAVIIGAKEVSEWPIVEPLPSYGQGIDLPGARHRSLINGHNVTDVVITGNNGIIDGQ 161
Query: 158 GAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL 217
G WWN +R L ++RP+L+EF++S I+ISN+ NSP W IHPV+CSNV++ VTI
Sbjct: 162 GLTWWNWFRSNKLNYSRPHLVEFVDSEDIVISNLTLLNSPAWGIHPVFCSNVMVHDVTIR 221
Query: 218 APADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTG 277
D+P TDGI PDS SN+CIEDS IS D +++KSGWD YGI G P+S I I RV
Sbjct: 222 TSLDAPLTDGIVPDSCSNMCIEDSSISVAHDAISLKSGWDNYGITIGRPASDIHISRVDL 281
Query: 278 SSPF-SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENA 336
+ + +A GSE SGG+ ++ +H+N++ GI KT GRGG+IR++ +SDV ME+
Sbjct: 282 QASLGAALAFGSEMSGGISDIHVDHLNIHGSSRGILFKTAPGRGGYIRDVVISDVQMEDV 341
Query: 337 RKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 396
IK GD HPD+ F+P+ALP++N IT+K++ GT + +G++ G+ PFT ICLSN
Sbjct: 342 NVAIKFTGDWSTHPDNHFDPSALPMINRITLKNMVGTNISVAGVLSGINGDPFTNICLSN 401
Query: 397 INLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 430
I+ S CS++SG + V P PC +L
Sbjct: 402 ISFSLADSTQSSSWSCSNISGYSELVFPEPCPDL 435
>gi|297792177|ref|XP_002863973.1| polygalacturonase [Arabidopsis lyrata subsp. lyrata]
gi|297309808|gb|EFH40232.1| polygalacturonase [Arabidopsis lyrata subsp. lyrata]
Length = 447
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 194/401 (48%), Positives = 266/401 (66%), Gaps = 4/401 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R + ITDFG VGDG+TLNT AF+ A++ ++ GG LYVPPG +LTGSFNLTSH+
Sbjct: 37 RPHSVKITDFGAVGDGETLNTLAFQNAVFYLKSFADKGGAQLYVPPGRWLTGSFNLTSHL 96
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL+L K AVI A+QD +W + LPSYGRG + PG RYMS I+GD L DVV+TG+NGTI
Sbjct: 97 TLFLEKDAVILASQDPSHWQVADALPSYGRGIDLPGKRYMSLINGDTLHDVVVTGDNGTI 156
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQG +WW+ + +L ++RP+L+EF++S ++I+SN+ F N+P + IH VYCSN+ I V
Sbjct: 157 DGQGLVWWDRFNSHSLEYSRPHLVEFVSSGNVIVSNLTFLNAPAYTIHSVYCSNLYIHRV 216
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
T +SP T GI PDSS NVCI+DS I+ G D +++KSGWDEYGI+Y P++ + I+
Sbjct: 217 TANTSPESPYTIGIVPDSSENVCIQDSSINMGYDAISLKSGWDEYGISYARPTANVQIKN 276
Query: 275 V-TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
V G++ S I+ GSE SGG+ +V +++N GI +T GRGG+I+ I +S+++M
Sbjct: 277 VYLGAASGSSISFGSEMSGGISDVEVRDAHIHNSLSGISFRTTNGRGGYIKEIDISNIHM 336
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
N G G HPD F+ NA P+V+ I + D+ G + +G G + SPFT I
Sbjct: 337 VNVGTAFLANGSFGTHPDSGFDANAFPLVSHIRLHDIAGENISTAGYFFGTEESPFTSIL 396
Query: 394 LSNINLQGVAGPTSPP--LKCSDVSGSAYQVKPWPCSELSS 432
LSNI+L + SP +CS V GS+ V P PC EL S
Sbjct: 397 LSNISLS-IKNSDSPADFWQCSYVDGSSEFVVPEPCLELKS 436
>gi|168021522|ref|XP_001763290.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685425|gb|EDQ71820.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 449
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/410 (48%), Positives = 261/410 (63%), Gaps = 3/410 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R ++TDFG VGDG ++NT+ F +AI I+ GG L V PG +LT FN+TSHM
Sbjct: 33 RPHVFNLTDFGAVGDGYSVNTRCFEDAIAAIKERASDGGAQLIVGPGRWLTAPFNVTSHM 92
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL+L++GA I A QD WP++ LPSYGRGRE PG RY S IHG ++D V+TG NG+I
Sbjct: 93 TLFLSRGATIVAIQDAGLWPILPALPSYGRGRELPGLRYSSLIHGQHVEDFVLTGHNGSI 152
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQG WW +Q+ L +TR L+E M S +I+IS+V QNSPFW++HP C+NV I V
Sbjct: 153 DGQGGWWWEQHKQKRLRYTRGRLVELMWSTNIVISDVTLQNSPFWHLHPYDCTNVTISGV 212
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
TILAP D+PNTDGIDPDS NV +E+ YIS GDD VAVKSGWD+YGI Y P +TIR
Sbjct: 213 TILAPLDAPNTDGIDPDSCKNVLVENCYISVGDDAVAVKSGWDKYGIEYNRPCVNVTIRN 272
Query: 275 VTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
V S S GI++GSE SGGVE VL E + ++ GI +KT+ GRGG+++NI ++ +
Sbjct: 273 VIARSQISAGISIGSEMSGGVEQVLVEDVYIWGSRRGIRIKTSPGRGGYVKNILYKNLTL 332
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
+ R GI + D G+HPD F+P ALPVV I+ V+G+ V+ + G K P TGI
Sbjct: 333 IDVRVGIVVKTDYGEHPDLDFDPKALPVVANISFDGVYGSSVRYPVRMFGSKEVPITGID 392
Query: 394 LSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTGACSNH 442
+ N+N+ G+ C + G +V P PC L + + +
Sbjct: 393 IRNMNV-GLTRKKRNVFTCDFLQGRVVGKVFPSPCKALIREEASQTATEE 441
>gi|356547950|ref|XP_003542367.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 491
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/456 (44%), Positives = 272/456 (59%), Gaps = 18/456 (3%)
Query: 4 FLVTLSILLSYFNCFSLASVVTCS----------GIVPMR----YRNDKISITDFGGVGD 49
F + LL++ + ASV G +P R R ++TDFGGVGD
Sbjct: 24 FFTSHKTLLTFLWIAAFASVFLWQRNIAGGFLVYGGIPARPMPMLRPMAFNLTDFGGVGD 83
Query: 50 GKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQD 109
G TLNT+AF+ A+ + + GG L VPPG +LT FNLTSHMTL+LA+ AVI D
Sbjct: 84 GVTLNTEAFKRAVSAVSKFGKKGGAQLNVPPGRWLTAPFNLTSHMTLFLAEDAVILGIDD 143
Query: 110 TWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRT 169
WPL+ PLPSYG GRE PG RY S IHG L+DVVITG NGTI+GQG WW +RQ+
Sbjct: 144 EKYWPLMPPLPSYGYGREHPGPRYGSLIHGQHLKDVVITGHNGTINGQGQTWWKKYRQKR 203
Query: 170 LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA-DSPNTDGI 228
L TR L++ M S I+I+N+ ++SPFW +HP C N+ I+ VTILAP +PNTDGI
Sbjct: 204 LNHTRGPLVQIMFSSDIVITNITLRDSPFWTLHPYDCKNITIKGVTILAPVFGAPNTDGI 263
Query: 229 DPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVG 287
DPDS ++ IED YIS GDD +A+KSGWD+YGIAYG PS I IR + S S GI++G
Sbjct: 264 DPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIMIRNLVVRSMVSAGISIG 323
Query: 288 SETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVG 347
SE SGGV NV+ E+I +++ G+ +KT GRG ++R IT ++ EN R GI + D
Sbjct: 324 SEMSGGVSNVMVENILIWDSRRGVRIKTARGRGAYVRQITYRNITFENVRVGIVMKTDYN 383
Query: 348 DHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTS 407
+HPDD ++P ALP++ I+ V G V+ I G + P + ++++ G+
Sbjct: 384 EHPDDGYDPMALPILRDISFTTVHGQGVRVPVRIHGSEEIPVRNVTFQDMSV-GLTYKKK 442
Query: 408 PPLKCSDVSGSAY-QVKPWPCSELSSSQQTGACSNH 442
+C+ V G + P PC L + G H
Sbjct: 443 HIFQCAFVQGRVIGTIYPAPCENLDRYNEQGQLVKH 478
>gi|326517826|dbj|BAK03831.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520253|dbj|BAK07385.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 495
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/408 (48%), Positives = 264/408 (64%), Gaps = 4/408 (0%)
Query: 33 RYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTS 92
R R ++TDFGGVGDG+T+NT+AF A+ I GG L VPPG +LTG FNLTS
Sbjct: 71 RLRPMAYNLTDFGGVGDGRTVNTRAFERAVETITAFADRGGAQLNVPPGRWLTGPFNLTS 130
Query: 93 HMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENG 152
HMTL+LA+GA I D NWPL+ LPSYG GRER G R+ S IHG L+DVVITG NG
Sbjct: 131 HMTLFLAEGAEILGITDEKNWPLMPALPSYGYGRERKGPRFGSLIHGQNLKDVVITGYNG 190
Query: 153 TIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIR 212
+I+GQG +WW R+R L TRP L++ M S+ I+++N+ +NSPFW+ HP C+NV +
Sbjct: 191 SINGQGEVWWLKHRRRMLKNTRPPLVQLMWSKDIVVTNITLRNSPFWHFHPYDCTNVTVS 250
Query: 213 YVTILAP-ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGIT 271
VTIL+P + +PNTDGIDPDS +V IE+ YIS GDD +A+KSGWD+YGIAYG SS I
Sbjct: 251 NVTILSPISGAPNTDGIDPDSCEDVLIENCYISVGDDAIAIKSGWDQYGIAYGRSSSNIL 310
Query: 272 IRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSD 330
IR VT S S GI++GSE SGGV N+ E++++++ G+ +KT IGRGG+IRNI+ S+
Sbjct: 311 IRNVTVRSLVSAGISIGSEMSGGVANITVENVHIWDSRRGVRIKTAIGRGGYIRNISYSN 370
Query: 331 VYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT 390
+ +N R GI I D +H DD ++ NA P + GI+ K + G V+ G P
Sbjct: 371 ITFDNVRAGIVIKVDYNEHADDGYDRNAFPDITGISFKKIHGRGVRVPVRAHGSNYIPIK 430
Query: 391 GICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTG 437
I ++++ G++ +CS + G V P PC L + G
Sbjct: 431 DITFQDMSV-GISYKKKHIFQCSYIEGRVIGSVFPKPCENLDVYDEQG 477
>gi|449452594|ref|XP_004144044.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/413 (47%), Positives = 259/413 (62%), Gaps = 4/413 (0%)
Query: 33 RYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTS 92
R R ++TDFG VGDG TLNTKAF +AI I LR GG L VP G +LT FNLTS
Sbjct: 69 RLRPAVFNLTDFGAVGDGVTLNTKAFEKAILAISKLRTKGGGQLNVPAGRWLTAPFNLTS 128
Query: 93 HMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENG 152
H+TL+L +GAVI QD WPL+ PLPSYG GRE G RY S IHG L+DVVITG NG
Sbjct: 129 HLTLFLDEGAVILGIQDEKYWPLMPPLPSYGYGREHIGPRYGSLIHGQNLRDVVITGHNG 188
Query: 153 TIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIR 212
TI GQG WW +RQ+ L TR L++ M SR I+ISN+ ++SPFW +HP C N+ IR
Sbjct: 189 TISGQGKTWWKKYRQKLLNHTRGPLVQIMWSRDILISNITLRDSPFWTLHPYDCKNITIR 248
Query: 213 YVTILAPA-DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGIT 271
VTILAP D+PNTDGIDPDS ++ IED YIS GDD +A+KSGWD+YGIAYG PS I
Sbjct: 249 NVTILAPVHDAPNTDGIDPDSCEDMLIEDCYISVGDDGIAIKSGWDQYGIAYGQPSKNIR 308
Query: 272 IRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSD 330
IR V S S GI++GSE SGGV + E++ ++N G+ +KT GRGG++++IT +
Sbjct: 309 IRNVVLQSMVSAGISIGSEMSGGVSGITVENVVVWNSRRGVRIKTAPGRGGYVQDITYRN 368
Query: 331 VYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT 390
+ ++ R GI I D +HPD+ ++P ALPV+ I+ + G V+ + G K+ P
Sbjct: 369 LTLDTVRVGIVIKTDYNEHPDEGYDPKALPVLKDISFTSIHGQGVRVPVRMHGSKDIPVR 428
Query: 391 GICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTGACSNH 442
+ ++++ G+ +C+ V G + P PC L + H
Sbjct: 429 NVTFKDMSV-GITYKKKHIFQCAFVHGRVIGTIFPAPCDNLDRYDERQRLIKH 480
>gi|357442057|ref|XP_003591306.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355480354|gb|AES61557.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 601
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/377 (49%), Positives = 254/377 (67%), Gaps = 15/377 (3%)
Query: 58 FREAIYRIQHLR--RSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPL 115
++ +Y I L + G + + P G+ H + AV+ Q++ +WP+
Sbjct: 200 YKLCLYCINRLESNKLGSLICFGPCGL----------HYDIVCETNAVLCLLQNSEDWPV 249
Query: 116 IAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRP 175
+ PLPSYGRGRE PGGR+ S I+G L DV+ITG NGTIDGQG+IWW+ +R +TL TRP
Sbjct: 250 VDPLPSYGRGRELPGGRHRSLIYGCNLTDVIITGNNGTIDGQGSIWWSKFRNKTLDHTRP 309
Query: 176 NLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSN 235
+L+E +NS ++ISN F NSPFW IHPVYCSNV ++ VTI+ P SPNTDGIDPDSS N
Sbjct: 310 HLVELINSTEVLISNATFLNSPFWTIHPVYCSNVTVQNVTIIVPFGSPNTDGIDPDSSDN 369
Query: 236 VCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVE 295
VCIED YISTGDDL+++KSGWDEYGI++G PS+ I+I R+TG + +GIA+GSE SGGV
Sbjct: 370 VCIEDCYISTGDDLISIKSGWDEYGISFGRPSTNISIHRLTGRTTSAGIAIGSEMSGGVS 429
Query: 296 NVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFN 355
V AE I +++ I +KT+ GRGG++RN+ +S++ + N I+ G G+HPDD ++
Sbjct: 430 EVYAEDIYIFDSKSAIRIKTSPGRGGYVRNVYISNMTLINVDIAIRFTGLYGEHPDDSYD 489
Query: 356 PNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDV 415
+ALPV+ IT+ +V G ++++GLIQG+K F ICLSNI L + P CSDV
Sbjct: 490 RDALPVIERITVVNVIGENIKRAGLIQGIKGDNFVDICLSNITLN---VSKNNPWNCSDV 546
Query: 416 SGSAYQVKPWPCSELSS 432
G + V P C +L+
Sbjct: 547 KGYSELVSPESCEQLNE 563
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 52/79 (65%)
Query: 26 CSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLT 85
C I R +SIT+FG VGDG TLNTKAF+ AI+ + GG L+VP G +LT
Sbjct: 69 CKQINIKEVRPHSVSITEFGAVGDGITLNTKAFQNAIFYLNSYADKGGAKLFVPAGRWLT 128
Query: 86 GSFNLTSHMTLYLAKGAVI 104
GSF+L SH+TL+L K AVI
Sbjct: 129 GSFDLISHLTLWLDKDAVI 147
>gi|449500524|ref|XP_004161121.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/413 (47%), Positives = 259/413 (62%), Gaps = 4/413 (0%)
Query: 33 RYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTS 92
R R ++TDFG VGDG TLNTKAF +AI I LR GG L VP G +LT FNLTS
Sbjct: 69 RLRPAVFNLTDFGAVGDGVTLNTKAFEKAILAISKLRTKGGGQLNVPAGRWLTAPFNLTS 128
Query: 93 HMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENG 152
H+TL+L +GAVI QD WPL+ PLPSYG GRE G RY S IHG L+DVVITG NG
Sbjct: 129 HLTLFLDEGAVILGIQDEKYWPLMPPLPSYGYGREHIGPRYGSLIHGQNLRDVVITGHNG 188
Query: 153 TIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIR 212
TI GQG WW +RQ+ L TR L++ M SR I+ISN+ ++SPFW +HP C N+ +R
Sbjct: 189 TISGQGKTWWKKYRQKLLNHTRGPLVQIMWSRDILISNITLRDSPFWTLHPYDCKNITVR 248
Query: 213 YVTILAPA-DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGIT 271
VTILAP D+PNTDGIDPDS ++ IED YIS GDD +A+KSGWD+YGIAYG PS I
Sbjct: 249 NVTILAPVHDAPNTDGIDPDSCEDMLIEDCYISVGDDGIAIKSGWDQYGIAYGQPSKNIR 308
Query: 272 IRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSD 330
IR V S S GI++GSE SGGV + E++ ++N G+ +KT GRGG++++IT +
Sbjct: 309 IRNVVLQSMVSAGISIGSEMSGGVSGITVENVVVWNSRRGVRIKTAPGRGGYVQDITYRN 368
Query: 331 VYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT 390
+ ++ R GI I D +HPD+ ++P ALPV+ I+ + G V+ + G K+ P
Sbjct: 369 LTLDTVRVGIVIKTDYNEHPDEGYDPKALPVLKDISFTSIHGQGVRVPVRMHGSKDIPVR 428
Query: 391 GICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTGACSNH 442
+ ++++ G+ +C+ V G + P PC L + H
Sbjct: 429 NVTFKDMSV-GITYKKKHIFQCAFVHGRVIGTIFPAPCDNLDRYDERQRLIKH 480
>gi|81074755|gb|ABB55373.1| polygalacturonase-like protein-like [Solanum tuberosum]
Length = 479
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/403 (50%), Positives = 278/403 (68%), Gaps = 3/403 (0%)
Query: 32 MRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLT 91
++ R +S+ DFG VG GKT+N AF+ AI+ ++ GG VP G +LT S N T
Sbjct: 62 LKPRPHSVSVLDFGAVGHGKTINNVAFQNAIFYLKSFADKGGAQFNVPAGKWLTRSINFT 121
Query: 92 SHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGEN 151
T+ L K AVI A++D +W ++ LPSYGRG E GRY S I G+ L DVVITG N
Sbjct: 122 CTYTV-LEKDAVILASEDFDHWDVVEALPSYGRGIEAQYGRYRSLISGNNLTDVVITGNN 180
Query: 152 GTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVI 211
GTIDGQG+IWW + +L +TRP+L+EF++SR+++ISN+ N+P WNI P YCSNVVI
Sbjct: 181 GTIDGQGSIWWEKFNSHSLNYTRPHLVEFVSSRNVVISNLTLLNAPGWNIRPAYCSNVVI 240
Query: 212 RYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGIT 271
+ +T+ P DSP T+GI PDSS +VCIE+S IS G D + +KSGWDEYGI+YG P+S +
Sbjct: 241 QNLTVYTPQDSPFTNGIVPDSSEHVCIENSNISMGYDAIVLKSGWDEYGISYGKPTSNVH 300
Query: 272 IRRV-TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSD 330
IRRV S+ +G+A+GSE SGG+ +VL E +L++ GI +KT GRGGFI++I +S+
Sbjct: 301 IRRVRLQSAAGAGVALGSEMSGGISDVLVELSSLHDSLFGIELKTARGRGGFIKDILISN 360
Query: 331 VYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT 390
V M+N + GIK G HPD+K++P++LP V+GIT +D+ GT + +G GL SPFT
Sbjct: 361 VVMDNLQVGIKATGYSDMHPDEKYDPSSLPTVSGITFEDIVGTNISIAGNFTGLSESPFT 420
Query: 391 GICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSS 433
ICLSNI++ + P++P L CS++SGS+ V P PC EL S
Sbjct: 421 SICLSNISISISSDPSTPWL-CSNISGSSKNVSPEPCPELQGS 462
>gi|297833452|ref|XP_002884608.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297330448|gb|EFH60867.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 446
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/429 (45%), Positives = 280/429 (65%), Gaps = 4/429 (0%)
Query: 4 FLVTLSILLSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIY 63
L S++ Y + G + + R +SITDFG VGDGKTLNT AF+ A++
Sbjct: 8 ILALTSLIPIYAKVLGAGKICDELGRISLSTRPHSVSITDFGAVGDGKTLNTLAFQNAVF 67
Query: 64 RIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYG 123
+ GG LYVPPG +LTGSF+LTSH+TL+L GAVI A+QD +W ++ PLPSYG
Sbjct: 68 YLMSFADKGGAQLYVPPGNWLTGSFSLTSHLTLFLENGAVIVASQDPSHWEVVDPLPSYG 127
Query: 124 RGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNS 183
RG + PG RY S I+G+ L DVV+TG+NGTIDGQG +WW+ + +L + RP+LIEF++S
Sbjct: 128 RGTDLPGKRYKSLINGNMLHDVVVTGDNGTIDGQGLVWWDRFTSHSLKYNRPHLIEFLSS 187
Query: 184 RSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYI 243
+++I+SN+ F N+P + IH +Y S+V I + + +SP T GI PDSS+ VCI++S I
Sbjct: 188 KNVIVSNLTFLNAPAYTIHSIYSSHVYIHKILAHSSPESPYTIGIVPDSSNYVCIQNSTI 247
Query: 244 STGDDLVAVKSGWDEYGIAYGHPSSGITIRRV--TGSSPFSGIAVGSETSGGVENVLAEH 301
+ G D +++KSGWDEYGIAY P+ + IR V G+S S I+ GSE SGG+ +V+ ++
Sbjct: 248 NVGYDAISLKSGWDEYGIAYSRPTENVHIRNVYLRGASG-SSISFGSEMSGGISDVVVDN 306
Query: 302 INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPV 361
+++N GI +T GRGG+I+ I +S++ M I G G HPDDK++ NALP+
Sbjct: 307 AHMHNSLTGIAFRTTKGRGGYIKEIDISNIDMSRIGTAIVANGSFGSHPDDKYDANALPL 366
Query: 362 VNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQ 421
V+ I + ++ G + +G + G+K SPF+ + LSNI L +G +S +CS V GS+
Sbjct: 367 VSHIRLSNISGENIGIAGKLFGIKESPFSAVALSNIALSTSSG-SSVSWQCSYVYGSSES 425
Query: 422 VKPWPCSEL 430
V P PC EL
Sbjct: 426 VIPEPCPEL 434
>gi|22327662|ref|NP_680409.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|20258821|gb|AAM14020.1| unknown protein [Arabidopsis thaliana]
gi|22136814|gb|AAM91751.1| unknown protein [Arabidopsis thaliana]
gi|332008401|gb|AED95784.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 449
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/401 (47%), Positives = 263/401 (65%), Gaps = 4/401 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R + ITDFG VGDGKTLNT AF+ A++ ++ GG LYVPPG +LTGSFNLTSH+
Sbjct: 39 RPHSVKITDFGAVGDGKTLNTLAFQNAVFYLKSFADKGGAQLYVPPGRWLTGSFNLTSHL 98
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL+L K AVI A+QD +W + LPSYGRG + PG RYMS I+GD L DVV+TG+NGTI
Sbjct: 99 TLFLEKDAVILASQDPSHWQVTDALPSYGRGIDLPGKRYMSLINGDMLHDVVVTGDNGTI 158
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQG +WW+ + +L ++RP+L+EF+++ ++I+SN+ F N+P + IH VYC N+ I V
Sbjct: 159 DGQGLVWWDRFNSHSLEYSRPHLVEFVSAENVIVSNLTFLNAPAYTIHSVYCRNLYIHRV 218
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
T +SP T GI PDSS NVCI++S I+ G D +++KSG DEYG++Y P++ + IR
Sbjct: 219 TANTCPESPYTIGIVPDSSENVCIQESSINMGYDAISLKSGCDEYGLSYARPTANVQIRN 278
Query: 275 V-TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
V ++ S I+ GSE SGG+ +V +++N GI +T GRGG+I+ I +S+++M
Sbjct: 279 VYLRAASGSSISFGSEMSGGISDVEVSDAHIHNSLSGIAFRTTNGRGGYIKEIDISNIHM 338
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
N G G HPD F+ NA P+V+ I + D+ G + +G G K SPFT I
Sbjct: 339 VNVGTAFLANGSFGTHPDSGFDENAYPLVSHIRLHDIVGENISTAGYFFGTKESPFTSIL 398
Query: 394 LSNINLQGVAGPTSPP--LKCSDVSGSAYQVKPWPCSELSS 432
LSNI+L + SP +CS V GS+ V P PC EL S
Sbjct: 399 LSNISLS-IKNSASPADSWQCSYVDGSSEFVVPEPCLELKS 438
>gi|79330402|ref|NP_001032043.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|110739511|dbj|BAF01664.1| hypothetical protein [Arabidopsis thaliana]
gi|332008402|gb|AED95785.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 447
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/401 (47%), Positives = 263/401 (65%), Gaps = 4/401 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R + ITDFG VGDGKTLNT AF+ A++ ++ GG LYVPPG +LTGSFNLTSH+
Sbjct: 37 RPHSVKITDFGAVGDGKTLNTLAFQNAVFYLKSFADKGGAQLYVPPGRWLTGSFNLTSHL 96
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL+L K AVI A+QD +W + LPSYGRG + PG RYMS I+GD L DVV+TG+NGTI
Sbjct: 97 TLFLEKDAVILASQDPSHWQVTDALPSYGRGIDLPGKRYMSLINGDMLHDVVVTGDNGTI 156
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQG +WW+ + +L ++RP+L+EF+++ ++I+SN+ F N+P + IH VYC N+ I V
Sbjct: 157 DGQGLVWWDRFNSHSLEYSRPHLVEFVSAENVIVSNLTFLNAPAYTIHSVYCRNLYIHRV 216
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
T +SP T GI PDSS NVCI++S I+ G D +++KSG DEYG++Y P++ + IR
Sbjct: 217 TANTCPESPYTIGIVPDSSENVCIQESSINMGYDAISLKSGCDEYGLSYARPTANVQIRN 276
Query: 275 V-TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
V ++ S I+ GSE SGG+ +V +++N GI +T GRGG+I+ I +S+++M
Sbjct: 277 VYLRAASGSSISFGSEMSGGISDVEVSDAHIHNSLSGIAFRTTNGRGGYIKEIDISNIHM 336
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
N G G HPD F+ NA P+V+ I + D+ G + +G G K SPFT I
Sbjct: 337 VNVGTAFLANGSFGTHPDSGFDENAYPLVSHIRLHDIVGENISTAGYFFGTKESPFTSIL 396
Query: 394 LSNINLQGVAGPTSPP--LKCSDVSGSAYQVKPWPCSELSS 432
LSNI+L + SP +CS V GS+ V P PC EL S
Sbjct: 397 LSNISLS-IKNSASPADSWQCSYVDGSSEFVVPEPCLELKS 436
>gi|356565754|ref|XP_003551102.1| PREDICTED: probable polygalacturonase-like isoform 1 [Glycine max]
Length = 492
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/416 (47%), Positives = 258/416 (62%), Gaps = 5/416 (1%)
Query: 30 VPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFN 89
+PM R ++TDFGGVGDG TLNT+AF A+ + + GG L VPPG +LT FN
Sbjct: 66 MPM-LRPMAFNLTDFGGVGDGVTLNTEAFERAVSAVSKFGKKGGAQLNVPPGRWLTAPFN 124
Query: 90 LTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITG 149
LTSHMTL+LA+ AVI D WPL+ PLPSYG GRE PG RY S IHG L+DVVITG
Sbjct: 125 LTSHMTLFLAEDAVILGIDDEKYWPLMPPLPSYGYGREHPGPRYGSLIHGQHLKDVVITG 184
Query: 150 ENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNV 209
NGTI+GQG WW +RQ+ L TR L++ M S I+I+N+ ++SPFW IHP C N+
Sbjct: 185 HNGTINGQGQSWWKKYRQKRLNHTRGPLVQIMFSSDIVITNITLRDSPFWTIHPYDCKNI 244
Query: 210 VIRYVTILAPA-DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 268
I+ VTILAP +PNTDGIDPDS ++ IED YIS GDD +AVKSGWD+YGI YG PS
Sbjct: 245 TIKGVTILAPVFGAPNTDGIDPDSCEDMLIEDCYISVGDDAIAVKSGWDQYGIDYGRPSM 304
Query: 269 GITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 327
I IR + S S GI++GSE SGGV NV E++ +++ G+ +KT GRG ++R IT
Sbjct: 305 NIMIRNLVVRSMVSAGISIGSEMSGGVSNVTVENLLIWDSRRGVRIKTAPGRGAYVRQIT 364
Query: 328 VSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS 387
++ EN R GI + D +HPDD ++P ALP++ I+ V G V+ I G +
Sbjct: 365 YRNITFENVRVGIVMKTDYNEHPDDGYDPLALPILRDISFTTVHGQGVRVPVRIHGSEEI 424
Query: 388 PFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTGACSNH 442
P + ++++ G+ +C+ V G + P PC L + G H
Sbjct: 425 PVRNVTFKDMSV-GLTYKKKHIFQCAFVQGRVIGTIYPAPCENLDRYNEQGQLVKH 479
>gi|357450133|ref|XP_003595343.1| Polygalacturonase [Medicago truncatula]
gi|355484391|gb|AES65594.1| Polygalacturonase [Medicago truncatula]
gi|388518965|gb|AFK47544.1| unknown [Medicago truncatula]
Length = 474
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/401 (48%), Positives = 250/401 (62%), Gaps = 4/401 (0%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
++TDFGGVGDG TLNTKAF A+ I R GG L VPPG +LT FNLTS MTL+LA
Sbjct: 57 NLTDFGGVGDGVTLNTKAFERAVSVISKFRNQGGAQLNVPPGFWLTSPFNLTSRMTLFLA 116
Query: 100 KGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGA 159
+ AVI A QD WPL+ LPSYG GRE PG RY S IHG L+DVVITG NGTI+GQG
Sbjct: 117 RDAVILAVQDEKYWPLMPALPSYGYGREHPGPRYSSLIHGQNLKDVVITGHNGTINGQGQ 176
Query: 160 IWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP 219
WW + L +TR L++ M S I+ISN+ ++SPFW +HP C NV I+ VTILAP
Sbjct: 177 TWWTKHLHKLLNYTRGPLVQIMYSSDIVISNITLRDSPFWTLHPYDCKNVTIKNVTILAP 236
Query: 220 A-DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR-VTG 277
+PNTDGIDPDS ++ IED YIS GDD +A+KSGWD+YGIAY PS I IR V
Sbjct: 237 VYHAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGIAYAKPSKNIIIRNLVVR 296
Query: 278 SSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 337
S+ +GI++GSE SGGV NV E+I ++ I +KT GRGG++R IT ++ N R
Sbjct: 297 SNVSAGISIGSEMSGGVSNVTIENILVWESRRAIRIKTAPGRGGYVRQITYRNITFHNVR 356
Query: 338 KGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNI 397
GI I D +HPDD ++P ALP++ I+ ++ G V+ I G + P + ++
Sbjct: 357 VGIVIKTDYNEHPDDGYDPTALPILRDISFTNIRGEGVRVPVRITGSEEIPVRNVTFHDM 416
Query: 398 NLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTG 437
N+ G+ +C+ V G + P PC + G
Sbjct: 417 NV-GITYKKKHIFQCAFVEGRVIGTIFPKPCRNFDQYNEQG 456
>gi|357137810|ref|XP_003570492.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 496
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/403 (49%), Positives = 257/403 (63%), Gaps = 4/403 (0%)
Query: 31 PMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNL 90
P R R ++TDFGGVGDG+TLNT+AF A+ I L GG L VPPG +LT FNL
Sbjct: 70 PPRLRPGAYNLTDFGGVGDGRTLNTQAFERAVEAIAALADRGGGQLNVPPGRWLTAPFNL 129
Query: 91 TSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGE 150
TSHMTL+LA+GA I D W L+ LPSYG GRER G RY S IHG L+DVVITG
Sbjct: 130 TSHMTLFLAEGAEILGITDEKYWTLMPALPSYGYGRERKGPRYGSLIHGQNLKDVVITGY 189
Query: 151 NGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVV 210
NG+I+GQG +WW R+R L TRP L++ M S II++N+ +NSPFW+ HP C+NV
Sbjct: 190 NGSINGQGEVWWLKHRRRMLKNTRPPLVQLMWSSDIIVTNITLRNSPFWHFHPYDCTNVT 249
Query: 211 IRYVTILAPAD-SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSG 269
+ VTILAP +PNTDGIDPDS +V IE+ YIS GDD +AVKSGWD+YGIAYG PSS
Sbjct: 250 VSNVTILAPVSGAPNTDGIDPDSCQDVLIENCYISVGDDAIAVKSGWDQYGIAYGRPSSN 309
Query: 270 ITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITV 328
I IR V S S GI++GSE SGGV NV E++ +++ G+ +KT GRGG+IRNI+
Sbjct: 310 ILIRNVAVRSLVSAGISIGSEMSGGVANVTVENVRIWDSRRGVRIKTATGRGGYIRNISY 369
Query: 329 SDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSP 388
++ +N R GI I D +H DD ++ NA P + GI+ K++ G V+ G P
Sbjct: 370 RNITFDNVRAGIVIKVDYNEHADDGYDRNAFPDITGISFKEIHGWGVRVPVRAHGSNIIP 429
Query: 389 FTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSEL 430
+ ++++ G++ +CS + G V P PC L
Sbjct: 430 IKDVTFQDMSV-GISYKKKHIFQCSYIEGRVIGSVFPKPCENL 471
>gi|356530447|ref|XP_003533792.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 494
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/449 (44%), Positives = 272/449 (60%), Gaps = 18/449 (4%)
Query: 11 LLSYFNCFSLASVV-----TCSGIV---------PMRYRNDKISITDFGGVGDGKTLNTK 56
LL++ +LASV+ T SG + P + R +T+FGGVGDG TLNT+
Sbjct: 34 LLAFLWVATLASVLLWQRTTISGFLVQGGVPVRAPPKLRPVVFCLTEFGGVGDGVTLNTE 93
Query: 57 AFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLI 116
AF + I L GG L VPPG +LT FNLTSHMTL+LA+ +VI A QD WPL+
Sbjct: 94 AFERGVGAISKLGDKGGGQLNVPPGRWLTAPFNLTSHMTLFLARDSVILAVQDEKYWPLM 153
Query: 117 APLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPN 176
LPSYG GRE PG RY S IHG L+DVVITG NGTI+GQG WW +RQ+ L TR
Sbjct: 154 PALPSYGYGREHPGPRYSSLIHGQNLRDVVITGHNGTINGQGQTWWTKYRQKLLNHTRGP 213
Query: 177 LIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP-ADSPNTDGIDPDSSSN 235
L++ + S +I+ISN+ ++SPFW +HP C NV ++ VTILAP + +PNTDGIDPDS +
Sbjct: 214 LVQILWSSNIVISNITLRDSPFWTLHPYDCKNVTVKNVTILAPVSHAPNTDGIDPDSCED 273
Query: 236 VCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR-VTGSSPFSGIAVGSETSGGV 294
+ IED YIS GDD +A+KSGWD+YGI YG PS I IR V S+ +GI++GSE SGGV
Sbjct: 274 MLIEDCYISVGDDAIAIKSGWDQYGITYGRPSKNIVIRNLVVRSNVSAGISIGSEMSGGV 333
Query: 295 ENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKF 354
NVL E+I ++ + +KT GRGG++R IT ++ +N R GI I D +HP +
Sbjct: 334 SNVLVENILVWESRRAMRIKTAPGRGGYVRQITYKNLMFKNVRVGIVIKTDYNEHPGTGY 393
Query: 355 NPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSD 414
+P ALP++ I+ ++ G V+ IQG + P + ++ + G+ +C+
Sbjct: 394 DPRALPILRDISFINIRGQGVRVPVRIQGSEQIPVRNVTFQDMKI-GITYKKKHIFQCAF 452
Query: 415 VSGSAY-QVKPWPCSELSSSQQTGACSNH 442
V G A + P PC + G H
Sbjct: 453 VQGQAIGTIFPSPCDSFDRYNEQGQLVKH 481
>gi|356558431|ref|XP_003547510.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 489
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/448 (44%), Positives = 274/448 (61%), Gaps = 8/448 (1%)
Query: 1 MFRFLVTLSILLSYFNCFSLASVVTCSGI---VPMRYRNDKISITDFGGVGDGKTLNTKA 57
+F ++ TL+ +L + +++ + G+ P + R +T+FGGVGDG TLNT+A
Sbjct: 31 VFLWVATLASVLVWQRT-TISGFLVLGGVPVRTPPKLRPVVFCLTEFGGVGDGVTLNTEA 89
Query: 58 FREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIA 117
F + I L GG L VPPG +LT FNLTSHMTL+LA+ AVI A QD WPL+
Sbjct: 90 FERGVGAISKLGDKGGGQLNVPPGRWLTAPFNLTSHMTLFLARDAVILAVQDEKYWPLMP 149
Query: 118 PLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNL 177
LPSYG GRE PG RY S IHG L DVVITG NGTI+GQG WW +RQ+ L TR L
Sbjct: 150 ALPSYGYGREHPGPRYSSLIHGQNLVDVVITGHNGTINGQGQTWWTKYRQKLLNHTRGPL 209
Query: 178 IEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP-ADSPNTDGIDPDSSSNV 236
++ + S +I+ISN+ ++SPFW +HP C NV ++ VTILAP + +PNTDGIDPDS ++
Sbjct: 210 VQILWSSNIVISNITLRDSPFWTLHPYDCKNVTVKKVTILAPVSHAPNTDGIDPDSCEDM 269
Query: 237 CIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR-VTGSSPFSGIAVGSETSGGVE 295
IED YIS GDD +A+KSGWD+YGI YG PS I IR V S+ +GI++GSE SGGV
Sbjct: 270 LIEDCYISVGDDAIAIKSGWDQYGITYGRPSKNIVIRNLVVRSNVSAGISIGSEMSGGVS 329
Query: 296 NVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFN 355
NVL E+I ++ + +KT GRGG++R IT ++ ++N R GI I D +HP ++
Sbjct: 330 NVLVENILVWESRRAMRIKTAPGRGGYVRQITYKNLMLKNVRVGIVIKTDYNEHPGAGYD 389
Query: 356 PNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDV 415
P ALP++ I+ ++ G V+ IQG + P + ++ + G+ +C+ V
Sbjct: 390 PRALPILRDISFMNIRGQGVRVPVRIQGSEQIPVRNVTFQDMKV-GITYKKKHIFQCAFV 448
Query: 416 SGSAY-QVKPWPCSELSSSQQTGACSNH 442
G A + P PC + G H
Sbjct: 449 QGQAIGTIFPSPCDSFDRYNEQGQLVKH 476
>gi|224068502|ref|XP_002326133.1| predicted protein [Populus trichocarpa]
gi|222833326|gb|EEE71803.1| predicted protein [Populus trichocarpa]
Length = 495
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/411 (47%), Positives = 261/411 (63%), Gaps = 5/411 (1%)
Query: 31 PM-RYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFN 89
PM + R ++TDFG VGDG T+NT+AF A+ I L + GG L VPPG +LT FN
Sbjct: 68 PMPQLRPVAFNLTDFGAVGDGATVNTEAFERAVSAISKLSKRGGGQLNVPPGRWLTAPFN 127
Query: 90 LTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITG 149
LTSHMTL+LA+GAVI QD WPL+ LPSYG GRE PG RY S IHG L+DVVITG
Sbjct: 128 LTSHMTLFLAEGAVILGIQDEKYWPLMPALPSYGYGREHPGPRYGSLIHGQNLRDVVITG 187
Query: 150 ENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNV 209
NGTIDGQG WW +RQ+ L TR L++ M S I+ +N+ ++SPFW +HP C NV
Sbjct: 188 HNGTIDGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVFTNITLRDSPFWTLHPYDCKNV 247
Query: 210 VIRYVTILAPA-DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 268
IR VTILAP ++PNTDGIDPDS ++ IED YIS GDD +A+KSGWD+YGIAYG PS+
Sbjct: 248 TIRNVTILAPIFEAPNTDGIDPDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPST 307
Query: 269 GITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 327
I IR + S S GI++GSE SGGV NV E++ +++ + +KT GRGG++R+IT
Sbjct: 308 NILIRNLVVRSMVSAGISIGSEMSGGVSNVTVENVLVWSSRRAVRIKTAPGRGGYVRHIT 367
Query: 328 VSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS 387
++ +N R GI I D +HPD+ ++P A+P++ I+ + G V+ I G +
Sbjct: 368 YRNLTFDNVRVGIVIKTDYNEHPDEGYDPKAVPILGDISFTGIHGQGVRVPVRIHGSQEI 427
Query: 388 PFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTG 437
P + ++++ G+ +C+ V G V P PC L + G
Sbjct: 428 PVRNVTFWDMSV-GLTYKKKHIFQCAFVQGRVIGTVFPAPCENLDRYDEQG 477
>gi|224142779|ref|XP_002324728.1| predicted protein [Populus trichocarpa]
gi|222866162|gb|EEF03293.1| predicted protein [Populus trichocarpa]
Length = 495
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/408 (47%), Positives = 256/408 (62%), Gaps = 4/408 (0%)
Query: 33 RYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTS 92
+ R ++TDFG VGDG TLNT+AF A+ I L R GG L VPPG +LT FNLTS
Sbjct: 71 KLRPVAFNLTDFGAVGDGVTLNTEAFERAVSAISKLARRGGGQLNVPPGKWLTAPFNLTS 130
Query: 93 HMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENG 152
HMTL+LA+ AVI QD WPL+ PLPSYG GRE PG RY S IHG L+D+VITG NG
Sbjct: 131 HMTLFLAEDAVILGIQDENYWPLMPPLPSYGYGREHPGPRYGSLIHGQNLRDIVITGHNG 190
Query: 153 TIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIR 212
TIDGQG WW +RQ+ L TR L++ M S I+ N+ +NSPFW +HP C NV IR
Sbjct: 191 TIDGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVFMNITLRNSPFWTLHPYDCKNVTIR 250
Query: 213 YVTILAPA-DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGIT 271
VTILAP ++PNTDGIDPDS ++ IED YIS GDD +A+KSGWD+YGIAYG PS+ I
Sbjct: 251 NVTILAPIFEAPNTDGIDPDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSTNIL 310
Query: 272 IRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSD 330
IR + S S GI++GSE SGGV +V E++ +++ + +KT GRG ++RNIT +
Sbjct: 311 IRNLVVRSMVSAGISIGSEMSGGVSSVTVENLLVWSSRRAVRIKTAPGRGAYVRNITYRN 370
Query: 331 VYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT 390
+ ++ R GI I D +HPD+ ++P A+P + I+ + G V+ I G + P
Sbjct: 371 LTFDDVRVGIVIKTDYNEHPDEGYDPKAVPTLQDISFSGIHGQGVRVPVRIHGSEEIPVR 430
Query: 391 GICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTG 437
+ ++++ G+ +C+ V G + P PC L + G
Sbjct: 431 NVTFQDMSV-GLTYKKKHIFQCAFVQGRVIGTIFPAPCENLDRYDEQG 477
>gi|388520257|gb|AFK48190.1| unknown [Lotus japonicus]
Length = 482
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/420 (47%), Positives = 258/420 (61%), Gaps = 4/420 (0%)
Query: 26 CSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLT 85
SG P R ++TDFGGVGDG TLNT AF A+ I LR GG L VPPG++LT
Sbjct: 51 VSGWTPPLLRPVAFNLTDFGGVGDGVTLNTVAFERAVSAISKLREKGGGQLNVPPGLWLT 110
Query: 86 GSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDV 145
FNLTSHMTL+LA+ AVI QD WPL+ LPSYG GRE PG RY S IHG L+DV
Sbjct: 111 APFNLTSHMTLFLAQDAVILGIQDEKYWPLMPALPSYGYGREHPGPRYGSLIHGQNLRDV 170
Query: 146 VITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVY 205
VITG NGTI+GQG WW +R++ L TR L++ M S I+I+N+ ++SPFW +HP
Sbjct: 171 VITGHNGTINGQGQSWWTKYREKLLNHTRGPLVQIMWSSDIVIANITLRDSPFWTLHPYD 230
Query: 206 CSNVVIRYVTILAPA-DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYG 264
C NV I+ VTILAP +PNTDGIDPDS ++ IED YIS GDD +A+KSGWD+YGIAYG
Sbjct: 231 CKNVTIKNVTILAPVYHAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGIAYG 290
Query: 265 HPSSGITIRR-VTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFI 323
PS I IR V S+ +GI++GSE SGGV NV E++ ++ I +KT GRGG++
Sbjct: 291 KPSKNIIIRNLVVRSNVSAGISIGSEMSGGVSNVTVENVLVWESRRAIRIKTAPGRGGYM 350
Query: 324 RNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQG 383
R IT ++ N R GI I + +HPD ++P A PV++ I+ +V G V+ I+G
Sbjct: 351 RQITYRNLTFNNVRVGIVIKTNYNEHPDAGYDPLAFPVLSDISFINVRGQGVRVPVRIEG 410
Query: 384 LKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTGACSNH 442
K + ++N+ G+ +C+ V G + P PC + G H
Sbjct: 411 SKEISVRNVTFQDMNV-GITYKKKHIFQCAFVEGRVIGTIFPAPCGNFDQYNEQGELVKH 469
>gi|297844882|ref|XP_002890322.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336164|gb|EFH66581.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 506
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/409 (47%), Positives = 260/409 (63%), Gaps = 5/409 (1%)
Query: 33 RYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRR-SGGTLLYVPPGVYLTGSFNLT 91
R R + DFGGVGDG TLNT+AF A+ I L R SGG L VPPG +LT FNLT
Sbjct: 81 RLRPVVFDLKDFGGVGDGVTLNTEAFERAVISISKLERNSGGGQLNVPPGRWLTAPFNLT 140
Query: 92 SHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGEN 151
SHMTL+LA+ + I +D WPL+ PLPSYG GRE PG RY S IHG L+D+VITG N
Sbjct: 141 SHMTLFLAEDSEILGVEDEKYWPLMPPLPSYGYGREHPGPRYGSLIHGQNLKDIVITGHN 200
Query: 152 GTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVI 211
GTI+GQG WW +++R L +TR L++ M S I+I+N+ ++SPFW +HP C NV I
Sbjct: 201 GTINGQGQSWWKKYQRRLLNYTRGPLVQIMWSSDIVIANITMRDSPFWTLHPYDCKNVTI 260
Query: 212 RYVTILAPAD-SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGI 270
R VTILAP +PNTDGIDPDS ++ IED YISTGDD +A+KSGWD++GIAYG PS+ I
Sbjct: 261 RNVTILAPVTGAPNTDGIDPDSCEDMVIEDCYISTGDDAIAIKSGWDQFGIAYGRPSTNI 320
Query: 271 TIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVS 329
IR + S S G+++GSE SGG+ NV E++ ++N GI +KT GRGG+IRNIT
Sbjct: 321 LIRNLVVRSVISAGVSIGSEMSGGISNVTIENLLIWNSRRGIRIKTAPGRGGYIRNITYK 380
Query: 330 DVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPF 389
++ ++N R GI I D +H DD ++ A P+++G + + G V+ I G + P
Sbjct: 381 NLTLDNVRVGIVIKTDYNEHADDNYDRKAYPILSGFSFAGIHGQGVRVPVRIHGSEQIPV 440
Query: 390 TGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTG 437
+ ++++ G+ +CS V G + + P PC + G
Sbjct: 441 RNVTFRDMSV-GLTYKKKHIFQCSFVKGRVFGSIFPRPCENFDVYDEEG 488
>gi|255550387|ref|XP_002516244.1| polygalacturonase, putative [Ricinus communis]
gi|223544730|gb|EEF46246.1| polygalacturonase, putative [Ricinus communis]
Length = 494
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/422 (45%), Positives = 265/422 (62%), Gaps = 5/422 (1%)
Query: 20 LASVVTCSGIVPM-RYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYV 78
A S + PM + R ++TDFGGVGDG TLNT+AF A+ I L + GG L V
Sbjct: 56 FAVFFKASPMRPMPKLRPVAFNLTDFGGVGDGVTLNTEAFERAVLAISKLGKKGGGQLNV 115
Query: 79 PPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIH 138
PPG ++T FNLTSHMTL+LA+ ++I +D WPL+ PLPSYG GRE PG RY S IH
Sbjct: 116 PPGRWVTAPFNLTSHMTLFLAEDSIILGIEDEKYWPLMPPLPSYGYGREHPGPRYGSLIH 175
Query: 139 GDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPF 198
G L+DVVITG NGTI+GQG WW +RQ+ L TR L++ M S I+I+N+ ++SPF
Sbjct: 176 GQNLKDVVITGHNGTINGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDILITNITLRDSPF 235
Query: 199 WNIHPVYCSNVVIRYVTILAPA-DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWD 257
W +HP C NV IR VTILAP ++PNTDGIDPDS ++ IED YIS GDD +A+KSGWD
Sbjct: 236 WTLHPYDCKNVTIRNVTILAPVLEAPNTDGIDPDSCEDMVIEDCYISVGDDGIAIKSGWD 295
Query: 258 EYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTN 316
+YGIAY PS+ I IR + S S GI++GSE SGGV N+ E++ +++ + +KT
Sbjct: 296 QYGIAYRRPSTNILIRNLVVRSMVSAGISIGSEMSGGVSNITVENLLVWSSRRAVRIKTA 355
Query: 317 IGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQ 376
GRGG++R+IT ++ +N R GI I D +HPD+ ++P A+PV+ I+ V G V+
Sbjct: 356 PGRGGYVRHITYRNLTFDNVRVGIVIKTDYNEHPDEGYDPKAVPVLRDISFTGVHGQGVR 415
Query: 377 QSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQ 435
I G + P + ++++ G+ +C+ V G + P PC L +
Sbjct: 416 VPVRIHGSEEIPVRNVTFQDMSV-GLTYKKKHIFQCAFVQGRVIGTIFPAPCENLDRYDE 474
Query: 436 TG 437
G
Sbjct: 475 QG 476
>gi|224077474|ref|XP_002305262.1| predicted protein [Populus trichocarpa]
gi|222848226|gb|EEE85773.1| predicted protein [Populus trichocarpa]
Length = 437
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/404 (48%), Positives = 253/404 (62%), Gaps = 12/404 (2%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R +TDFG VGDGKT NTKAF EAI ++ GG L VP G +LTGSFNLTSH
Sbjct: 10 RKHSAVLTDFGAVGDGKTSNTKAFAEAIKKLSKYAPDGGAQLIVPAGKWLTGSFNLTSHF 69
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRE-----RPGGRYMSFIHGDGLQDVVITG 149
TL+L K AV+ A+QD WPL+ PLPSYG RE RPGG I + DV+ITG
Sbjct: 70 TLFLHKDAVLLASQDEDEWPLLTPLPSYGGVRENAVFGRPGG----LIFASNVTDVIITG 125
Query: 150 ENGTIDGQGAIWWNMWRQRTLP-FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 208
NGT+DGQGA+WW + ++ L RP LIE M S + ISN+ NSP W++HP+Y SN
Sbjct: 126 NNGTVDGQGAVWWEKFNEKKLKKLERPYLIEIMYSDQVQISNITLINSPQWHVHPIYSSN 185
Query: 209 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 268
+ I+ VTILAP D PNTDGI+PDS +NV IED YI +GDD +AVKSG D+YGI G P
Sbjct: 186 LWIQGVTILAPVDVPNTDGINPDSCTNVIIEDCYIVSGDDCIAVKSGLDQYGIKVGMPMK 245
Query: 269 GITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 327
+ IRR+T SP S IA+GSE SGG+E+V E I N + VKT +GRGG++++I
Sbjct: 246 QLVIRRITCISPKSAAIALGSEMSGGIEDVRIEDITAINTESAVRVKTAVGRGGYVKDIF 305
Query: 328 VSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGL-KN 386
V + ++ + + G H D+ ++P ALP + I +D+ V G ++GL +
Sbjct: 306 VRRMTLKTMKYVFWMIGSYSSHADEGYDPKALPEITNINFRDIAADNVTIPGKLEGLGEG 365
Query: 387 SPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 430
+PFTGIC+SN+ + P C+DVSG + V P PC+ L
Sbjct: 366 NPFTGICISNVTMTLAEKHKEPAWNCTDVSGVSSNVTPMPCAAL 409
>gi|242063272|ref|XP_002452925.1| hypothetical protein SORBIDRAFT_04g035020 [Sorghum bicolor]
gi|241932756|gb|EES05901.1| hypothetical protein SORBIDRAFT_04g035020 [Sorghum bicolor]
Length = 500
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 193/401 (48%), Positives = 256/401 (63%), Gaps = 4/401 (0%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
++TDFG VGDG+ +NT+AF A+ I L GG L VPPG +LT FNLTSHMTL+LA
Sbjct: 83 NLTDFGAVGDGRAVNTEAFERAVETIAALAERGGGQLNVPPGRWLTAPFNLTSHMTLFLA 142
Query: 100 KGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGA 159
+GA I D WPL+ LPSYG GRER G R+ S IHG L+DVVITG NG+I+GQG
Sbjct: 143 EGAEILGITDEKYWPLMPALPSYGYGRERKGPRFGSLIHGQNLKDVVITGHNGSINGQGE 202
Query: 160 IWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP 219
+WW R+R L TRP L++ M S+ III+N+ +NSPFW++HP C+NV + VTIL+P
Sbjct: 203 VWWMKHRRRILNNTRPPLVQLMWSKDIIIANITLRNSPFWHLHPYDCTNVTVSNVTILSP 262
Query: 220 AD-SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGS 278
+PNTDGIDPDSS +V IE+ YIS GDD +A+KSGWD+YGIAYG PSS I+IR V
Sbjct: 263 VSGAPNTDGIDPDSSQDVLIENCYISVGDDAIAIKSGWDQYGIAYGRPSSNISIRNVNAR 322
Query: 279 SPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 337
S S GI++GSE SGGV NV E++ ++ G+ +KT GRGG+IRNI+ ++ +N R
Sbjct: 323 SLVSAGISIGSEMSGGVANVTVENVRIWESRRGVRIKTATGRGGYIRNISYRNITFDNVR 382
Query: 338 KGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNI 397
GI I D +H DD ++ A P + I+ K + G V+ G P I ++
Sbjct: 383 AGIVIKVDYNEHADDGYDRTAFPDITSISFKGIHGRGVRVPVRAHGSDVIPIRDISFQDM 442
Query: 398 NLQGVAGPTSPPLKCSDVSGSAYQ-VKPWPCSELSSSQQTG 437
++ G++ +CS V G + V P PC L + G
Sbjct: 443 SV-GISYKKKHIFQCSYVEGRVVRPVFPKPCENLDIYDEQG 482
>gi|226492991|ref|NP_001140630.1| uncharacterized protein LOC100272705 [Zea mays]
gi|194700250|gb|ACF84209.1| unknown [Zea mays]
gi|413924334|gb|AFW64266.1| hypothetical protein ZEAMMB73_686606 [Zea mays]
Length = 495
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 191/401 (47%), Positives = 255/401 (63%), Gaps = 4/401 (0%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
+ITDFG VGDG+ +NT AF A+ I L GG L VPPG +LT FNLTSHMTL+LA
Sbjct: 78 NITDFGAVGDGRAVNTAAFERAVEAIAALAERGGGQLNVPPGRWLTAPFNLTSHMTLFLA 137
Query: 100 KGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGA 159
+GA I D WPL+ LPSYG GRER G R+ S IHG L+DVVITG NG+I+GQG
Sbjct: 138 EGAEILGITDEKYWPLMPALPSYGYGRERKGPRFGSLIHGQNLRDVVITGHNGSINGQGE 197
Query: 160 IWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP 219
+WW R+R L TRP L++ M S+ II++N+ +NSPFW++HP C+NV + VTI++P
Sbjct: 198 VWWMKHRRRILNNTRPPLVQLMWSKDIIVANITLRNSPFWHLHPYDCTNVTVSNVTIMSP 257
Query: 220 -ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGS 278
+ +PNTDGIDPDS +V IE+ YIS GDD +A+KSGWD+YGIAYG PSS I IR VT
Sbjct: 258 VSGAPNTDGIDPDSCQDVLIENCYISVGDDAIAIKSGWDQYGIAYGRPSSDILIRNVTAR 317
Query: 279 SPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 337
S S GI++GSE SGGV NV E++ ++ G+ +KT GRGG+IRNI+ ++ +N R
Sbjct: 318 SLVSAGISIGSEMSGGVANVTVENVRIWESRRGVRIKTATGRGGYIRNISYRNITFDNVR 377
Query: 338 KGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNI 397
GI I D +H DD ++ A P + I+ K + G V+ G P I ++
Sbjct: 378 AGIVIKVDYNEHADDGYDRTAFPDITSISFKGIHGQGVRVPVRAHGSDVIPIKDISFQDM 437
Query: 398 NLQGVAGPTSPPLKCSDVSGSAYQ-VKPWPCSELSSSQQTG 437
++ G++ +CS + G + V P PC L + G
Sbjct: 438 SV-GISYKKKHIFQCSYLEGRVIRPVFPKPCENLDVYDEQG 477
>gi|297818750|ref|XP_002877258.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297323096|gb|EFH53517.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 189/400 (47%), Positives = 254/400 (63%), Gaps = 4/400 (1%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
++TDFG VGDG T+NT+AF AIY+I L GG L VPPG +LT FNLTS+MTL+L
Sbjct: 69 FNLTDFGAVGDGVTVNTEAFERAIYKISKLATKGGGQLNVPPGRWLTAPFNLTSYMTLFL 128
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
A+ A I A QD WPL+ PLPSYG GRE G RY SFIHG L+DVV+TG NG+I+GQG
Sbjct: 129 AENAEILALQDEKYWPLLPPLPSYGYGREHHGPRYGSFIHGQNLRDVVVTGNNGSINGQG 188
Query: 159 AIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILA 218
WW +RQ+ L TR L++ M S I+ +N+ ++SPFW +HP C NV I +TILA
Sbjct: 189 QTWWKKYRQKLLNHTRGPLVQIMWSSDIVFANITLRDSPFWTLHPYDCKNVTITNMTILA 248
Query: 219 PA-DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTG 277
P ++PNTDGIDPDS ++ IE+SYIS GDD +A+KSGWD+YG YG PS I IR +
Sbjct: 249 PVFEAPNTDGIDPDSCEDMLIENSYISVGDDGIAIKSGWDQYGTTYGRPSKNILIRNLII 308
Query: 278 SSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENA 336
S S GI++GSE SGGV N+ E+I +++ G+ +KT GRGG++R+IT +V ++
Sbjct: 309 RSMVSAGISIGSEMSGGVSNITVENILIWSSRRGVRIKTAPGRGGYVRDITFRNVTLDEL 368
Query: 337 RKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 396
R GI I D +HPD FNP A P++ I ++G V+ IQG K P + +
Sbjct: 369 RVGIVIKTDYNEHPDGGFNPQAFPILENINYTGIYGQGVRVPVRIQGSKEIPVKNVTFRD 428
Query: 397 INLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQ 435
+++ G+ +C+ V G + P PC L +
Sbjct: 429 MSV-GITYKKKHIFQCAYVEGRVIGTIFPAPCENLDRYDE 467
>gi|225444665|ref|XP_002277239.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
gi|297738532|emb|CBI27777.3| unnamed protein product [Vitis vinifera]
Length = 493
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 193/413 (46%), Positives = 256/413 (61%), Gaps = 4/413 (0%)
Query: 33 RYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTS 92
R R ++TDFGGVGD T+NT+AF AI I L + GG L VP G +LT FNLTS
Sbjct: 69 RLRPAVYNLTDFGGVGDSVTVNTEAFERAISAISKLGKKGGGQLNVPAGNWLTAPFNLTS 128
Query: 93 HMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENG 152
HMTL+L + AVI QD WPL+ PLPSYG GRE G RY S IHG L+DVVITG NG
Sbjct: 129 HMTLFLDQDAVILGIQDEKYWPLMPPLPSYGYGREHRGARYGSLIHGQNLKDVVITGHNG 188
Query: 153 TIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIR 212
TI+GQG WW +RQ+ L TR L++ M S I+ISN+ ++SPFW +HP C NV I+
Sbjct: 189 TINGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVISNITLRDSPFWTLHPYDCKNVTIK 248
Query: 213 YVTILAPA-DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGIT 271
VTILAP ++PNTDGIDPDS ++ IED YIS GDD +A+KSGWD+YG+AYG PS I
Sbjct: 249 NVTILAPIFEAPNTDGIDPDSCEDMVIEDCYISVGDDGIAIKSGWDQYGVAYGRPSVNIL 308
Query: 272 IRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSD 330
IR + S S G+++GSE SGGV NV E++ ++N + +KT+ GRGG++++I +
Sbjct: 309 IRNLVIRSMVSAGVSIGSEMSGGVSNVTVENLLVWNSRRAVRIKTSPGRGGYVQHINYRN 368
Query: 331 VYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT 390
+ +N R GI I D +HPDD F+P ALP++ I+ V G V+ I G + P
Sbjct: 369 LTFDNVRVGIVIKTDYNEHPDDGFDPKALPILEDISFTGVHGQGVRVPVRIHGSEEIPVK 428
Query: 391 GICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTGACSNH 442
+ ++++ G+ +C+ V G V P PC L + H
Sbjct: 429 KVTFRDMSV-GITYKKKHIFQCAYVEGRVIGTVFPAPCENLDRYDEQEQLIKH 480
>gi|15229188|ref|NP_189881.1| Pectin lyase-like protein [Arabidopsis thaliana]
gi|7529266|emb|CAB86682.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|15215709|gb|AAK91400.1| AT3g42950/F18P9_110 [Arabidopsis thaliana]
gi|332644239|gb|AEE77760.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 484
Score = 364 bits (935), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 187/400 (46%), Positives = 255/400 (63%), Gaps = 4/400 (1%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
++TDFG VGDG T+NT+AF +AIY+I L + GG L VPPG +LT FNLTS+MTL+L
Sbjct: 66 FNLTDFGAVGDGVTINTEAFEKAIYKISKLAKKGGGQLNVPPGRWLTAPFNLTSYMTLFL 125
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
++ A I A QD W L+ PLPSYG GRE G RY SFIHG L+DVV+TG NG+I+GQG
Sbjct: 126 SENAEILALQDEKYWSLLPPLPSYGYGREHHGPRYGSFIHGQNLRDVVVTGNNGSINGQG 185
Query: 159 AIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILA 218
WW +RQ+ L TR L++ M S I+ +N+ ++SPFW +HP C NV I +TILA
Sbjct: 186 QTWWKKYRQKLLNHTRGPLVQIMWSSDIVFANITLRDSPFWTLHPYDCKNVTITNMTILA 245
Query: 219 PA-DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTG 277
P ++PNTDGIDPDS ++ IE+SYIS GDD +A+KSGWD+YG YG PS I IR +
Sbjct: 246 PVFEAPNTDGIDPDSCEDMLIENSYISVGDDGIAIKSGWDQYGTTYGKPSKNILIRNLII 305
Query: 278 SSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENA 336
S S GI++GSE SGGV N+ E+I +++ G+ +KT GRGG++R+IT +V ++
Sbjct: 306 RSMVSAGISIGSEMSGGVSNITVENILIWSSRRGVRIKTAPGRGGYVRDITFRNVTLDEL 365
Query: 337 RKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 396
R GI I D +HPD FNP A P++ I ++G V+ IQG K P + +
Sbjct: 366 RVGIVIKTDYNEHPDGGFNPQAFPILENINYTGIYGQGVRVPVRIQGSKEIPVKNVTFRD 425
Query: 397 INLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQ 435
+++ G+ +C+ V G + P PC L +
Sbjct: 426 MSV-GITYKKKHIFQCAYVEGRVIGTIFPAPCDNLDRYDE 464
>gi|23506093|gb|AAN28906.1| At3g42950/F18P9_110 [Arabidopsis thaliana]
Length = 484
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 187/400 (46%), Positives = 254/400 (63%), Gaps = 4/400 (1%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
++TDFG VGDG T+NT+AF +AIY+I L + GG L VPPG +LT FNLTS+MTL+L
Sbjct: 66 FNLTDFGAVGDGVTINTEAFEKAIYKISKLAKKGGGQLNVPPGRWLTAPFNLTSYMTLFL 125
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
++ A I A QD W L+ PLPSYG GRE G RY SFIHG L+DVV+TG NG+I+GQG
Sbjct: 126 SENAEILALQDEKYWSLLPPLPSYGYGREHHGPRYGSFIHGQNLRDVVVTGNNGSINGQG 185
Query: 159 AIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILA 218
WW +RQ+ L TR L + M S I+ +N+ ++SPFW +HP C NV I +TILA
Sbjct: 186 QTWWKKYRQKLLNHTRGPLAQIMWSSDIVFANITLRDSPFWTLHPYDCKNVTITNMTILA 245
Query: 219 PA-DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTG 277
P ++PNTDGIDPDS ++ IE+SYIS GDD +A+KSGWD+YG YG PS I IR +
Sbjct: 246 PVFEAPNTDGIDPDSCEDMLIENSYISVGDDGIAIKSGWDQYGTTYGKPSKNILIRNLII 305
Query: 278 SSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENA 336
S S GI++GSE SGGV N+ E+I +++ G+ +KT GRGG++R+IT +V ++
Sbjct: 306 RSMVSAGISIGSEMSGGVSNITVENILIWSSRRGVRIKTAPGRGGYVRDITFRNVTLDEL 365
Query: 337 RKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 396
R GI I D +HPD FNP A P++ I ++G V+ IQG K P + +
Sbjct: 366 RVGIVIKTDYNEHPDGGFNPQAFPILENINYTGIYGQGVRVPVRIQGSKEIPVKNVTFRD 425
Query: 397 INLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQ 435
+++ G+ +C+ V G + P PC L +
Sbjct: 426 MSV-GITYKKKHIFQCAYVEGRVIGTIFPAPCDNLDRYDE 464
>gi|30679999|ref|NP_850525.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|20260262|gb|AAM13029.1| unknown protein [Arabidopsis thaliana]
gi|22136514|gb|AAM91335.1| unknown protein [Arabidopsis thaliana]
gi|332640935|gb|AEE74456.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 446
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 193/429 (44%), Positives = 278/429 (64%), Gaps = 4/429 (0%)
Query: 4 FLVTLSILLSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIY 63
L S++ Y N + G + R +SITDFG VGDGKTLNT AF+ A++
Sbjct: 8 ILALTSVIPIYANVHGAGKICDELGRRSLSTRPHSVSITDFGAVGDGKTLNTLAFQNAVF 67
Query: 64 RIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYG 123
+ GG LYVPPG +LTGSF+LTSH+TL+L GAVI A+QD +W ++ PLPSYG
Sbjct: 68 YLMSFADKGGAQLYVPPGHWLTGSFSLTSHLTLFLENGAVIVASQDPSHWEVVDPLPSYG 127
Query: 124 RGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNS 183
RG + PG RY S I+G+ L DVV+TG+NGTIDGQG +WW+ + +L + RP+LIEF++S
Sbjct: 128 RGIDLPGKRYKSLINGNKLHDVVVTGDNGTIDGQGLVWWDRFTSHSLKYNRPHLIEFLSS 187
Query: 184 RSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYI 243
++I+SN+ F N+P ++I+ +Y S+V I + + SP T GI PDSS VCI++S I
Sbjct: 188 ENVIVSNLTFLNAPAYSIYSIYSSHVYIHKILAHSSPKSPYTIGIVPDSSDYVCIQNSTI 247
Query: 244 STGDDLVAVKSGWDEYGIAYGHPSSGITIRRV--TGSSPFSGIAVGSETSGGVENVLAEH 301
+ G D +++KSGWDEYGIAY P+ + IR V G+S S I+ GSE SGG+ +V+ ++
Sbjct: 248 NVGYDAISLKSGWDEYGIAYSRPTENVHIRNVYLRGASG-SSISFGSEMSGGISDVVVDN 306
Query: 302 INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPV 361
+++ GI +T GRGG+I+ I +S++ M I G G HPDDK++ NALP+
Sbjct: 307 AHIHYSLTGIAFRTTKGRGGYIKEIDISNIDMLRIGTAIVANGSFGSHPDDKYDVNALPL 366
Query: 362 VNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQ 421
V+ I + ++ G + +G + G+K SPF+ + LSN++L +G +S +CS V GS+
Sbjct: 367 VSHIRLSNISGENIGIAGKLFGIKESPFSSVTLSNVSLSMSSG-SSVSWQCSYVYGSSES 425
Query: 422 VKPWPCSEL 430
V P PC EL
Sbjct: 426 VIPEPCPEL 434
>gi|297742230|emb|CBI34379.3| unnamed protein product [Vitis vinifera]
Length = 433
Score = 362 bits (930), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 194/397 (48%), Positives = 242/397 (60%), Gaps = 48/397 (12%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R S+TDFGGVGDG T NTKAF+ AI + GG+ L+VPPG +LTGSFNLTSH
Sbjct: 49 RAHSASLTDFGGVGDGTTSNTKAFQAAIDHLSQFASDGGSQLFVPPGRWLTGSFNLTSHF 108
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TLYL K AV+ A+QD WP+I PLPSYGRGR+ GGRY+S I G L DVVITGENGTI
Sbjct: 109 TLYLHKDAVLLASQDEHEWPVIDPLPSYGRGRDTQGGRYISLIFGTNLTDVVITGENGTI 168
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQGA+WW + + L +TRP LIE M+S ++ IS++ NSP WN+HPVY SNV+I+ +
Sbjct: 169 DGQGALWWAKFHKGELKYTRPYLIEIMHSDNVQISSLTLVNSPSWNVHPVYSSNVIIQGL 228
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
TI AP SPNTDGI+PDS +N IED YI +GDD +AVKSGWDEYGIAYG P+ + IRR
Sbjct: 229 TITAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDEYGIAYGMPTKQLVIRR 288
Query: 275 VTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
+T SPFS IA+GSE SGG+E+V AE I + G+ +KT I D+
Sbjct: 289 LTCISPFSATIALGSEMSGGIEDVRAEDILAIDTESGVRIKT--------AGINYRDMVA 340
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
EN V +G ++G+ PFTGIC
Sbjct: 341 EN---------------------------------------VTMAGRLEGISGDPFTGIC 361
Query: 394 LSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 430
+SN+ + P C+D++G V P PC L
Sbjct: 362 ISNVTIGLAKKAKKAPWTCTDIAGITSGVVPQPCDLL 398
>gi|15221958|ref|NP_173351.1| Pectin lyase-like protein [Arabidopsis thaliana]
gi|332191692|gb|AEE29813.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 506
Score = 362 bits (930), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 192/409 (46%), Positives = 258/409 (63%), Gaps = 5/409 (1%)
Query: 33 RYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTL-LYVPPGVYLTGSFNLT 91
R R + DFGGVGDG TLNT+AF A+ I L S G L VPPG +LT FNLT
Sbjct: 81 RLRPVVFDLKDFGGVGDGFTLNTEAFERAVISISKLGGSSGGGQLNVPPGRWLTAPFNLT 140
Query: 92 SHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGEN 151
SHMTL+LA+ + I +D WPL+ PLPSYG GRERPG RY S IHG L+D+VITG N
Sbjct: 141 SHMTLFLAEDSEILGVEDEKYWPLMPPLPSYGYGRERPGPRYGSLIHGQNLKDIVITGHN 200
Query: 152 GTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVI 211
GTI+GQG WW ++R L +TR L++ M S I+I+N+ ++SPFW +HP C NV I
Sbjct: 201 GTINGQGQSWWKKHQRRLLNYTRGPLVQIMWSSDIVIANITMRDSPFWTLHPYDCKNVTI 260
Query: 212 RYVTILAPAD-SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGI 270
R VTILAP +PNTDGIDPDS ++ IED YISTGDD +A+KSGWD++GIAYG PS+ I
Sbjct: 261 RNVTILAPVTGAPNTDGIDPDSCEDMVIEDCYISTGDDAIAIKSGWDQFGIAYGRPSTNI 320
Query: 271 TIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVS 329
IR + S S G+++GSE SGG+ NV E++ ++N GI +KT GRGG+IRNIT
Sbjct: 321 LIRNLVVRSVISAGVSIGSEMSGGISNVTIENLLIWNSRRGIRIKTAPGRGGYIRNITYK 380
Query: 330 DVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPF 389
++ ++N R GI I D +H DD ++ A P+++G + + G V+ I G + P
Sbjct: 381 NLTLDNVRVGIVIKTDYNEHADDNYDRKAYPILSGFSFAGIHGQGVRVPVRIHGSEQIPV 440
Query: 390 TGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTG 437
+ ++++ G+ +CS V G + + P PC + G
Sbjct: 441 RNVTFRDMSV-GLTYKKKHIFQCSFVKGRVFGSIFPRPCENFDVYDEEG 488
>gi|19698861|gb|AAL91166.1| unknown protein [Arabidopsis thaliana]
gi|23197646|gb|AAN15350.1| unknown protein [Arabidopsis thaliana]
Length = 506
Score = 360 bits (923), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 191/409 (46%), Positives = 257/409 (62%), Gaps = 5/409 (1%)
Query: 33 RYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTL-LYVPPGVYLTGSFNLT 91
R R + DFGGVGDG TLNT+AF A+ I L S G L VPPG +LT F LT
Sbjct: 81 RLRPVVFDLKDFGGVGDGFTLNTEAFERAVISISKLGGSSGGGQLNVPPGRWLTAPFYLT 140
Query: 92 SHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGEN 151
SHMTL+LA+ + I +D WPL+ PLPSYG GRERPG RY S IHG L+D+VITG N
Sbjct: 141 SHMTLFLAEDSEILGVEDEKYWPLMPPLPSYGYGRERPGPRYGSLIHGQNLKDIVITGHN 200
Query: 152 GTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVI 211
GTI+GQG WW ++R L +TR L++ M S I+I+N+ ++SPFW +HP C NV I
Sbjct: 201 GTINGQGQSWWKKHQRRLLNYTRGPLVQIMWSSDIVIANITMRDSPFWTLHPYDCKNVTI 260
Query: 212 RYVTILAPAD-SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGI 270
R VTILAP +PNTDGIDPDS ++ IED YISTGDD +A+KSGWD++GIAYG PS+ I
Sbjct: 261 RNVTILAPVTGAPNTDGIDPDSCEDMVIEDCYISTGDDAIAIKSGWDQFGIAYGRPSTNI 320
Query: 271 TIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVS 329
IR + S S G+++GSE SGG+ NV E++ ++N GI +KT GRGG+IRNIT
Sbjct: 321 LIRNLVVRSVISAGVSIGSEMSGGISNVTIENLLIWNSRRGIRIKTAPGRGGYIRNITYK 380
Query: 330 DVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPF 389
++ ++N R GI I D +H DD ++ A P+++G + + G V+ I G + P
Sbjct: 381 NLTLDNVRVGIVIKTDYNEHADDNYDRKAYPILSGFSFAGIHGQGVRVPVRIHGSEQIPV 440
Query: 390 TGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTG 437
+ ++++ G+ +CS V G + + P PC + G
Sbjct: 441 RNVTFRDMSV-GLTYKKKHIFQCSFVKGRVFGSIFPRPCENFDVYDEEG 488
>gi|129771144|gb|ABO31369.1| polygalacturonase [Gossypium hirsutum]
Length = 219
Score = 358 bits (918), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 176/205 (85%), Positives = 189/205 (92%)
Query: 139 GDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPF 198
GDGL DVVI GENGTIDGQG IWWNMWRQ LPFTRPNL+EFMNSR IIISNVIF+NSPF
Sbjct: 8 GDGLPDVVIRGENGTIDGQGGIWWNMWRQGNLPFTRPNLVEFMNSRGIIISNVIFKNSPF 67
Query: 199 WNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDE 258
WNI PVYCSNVVIRYVTILAP DSPNTDGIDPDSSSNVCIEDS+ISTGDDLVAVKSGWDE
Sbjct: 68 WNIPPVYCSNVVIRYVTILAPTDSPNTDGIDPDSSSNVCIEDSFISTGDDLVAVKSGWDE 127
Query: 259 YGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIG 318
YGI YG PSS ITIRRVTGSSPF+GIAVGSETSGGVE+VLAE+I +YN G+G+++KTNIG
Sbjct: 128 YGIGYGRPSSHITIRRVTGSSPFAGIAVGSETSGGVEHVLAENIVIYNSGIGVNIKTNIG 187
Query: 319 RGGFIRNITVSDVYMENARKGIKIA 343
RGGFI+NITVS V+MEN R GIKIA
Sbjct: 188 RGGFIKNITVSPVFMENVRTGIKIA 212
>gi|54290861|dbj|BAD61522.1| polygalacturonase-like [Oryza sativa Japonica Group]
Length = 261
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 169/249 (67%), Positives = 207/249 (83%), Gaps = 2/249 (0%)
Query: 193 FQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAV 252
FQ+SPFWNIHPVYCSNVVIR VT+LAP DSPNTDGIDPDSSSNVCIED YISTGDDL+A+
Sbjct: 13 FQDSPFWNIHPVYCSNVVIRNVTVLAPHDSPNTDGIDPDSSSNVCIEDCYISTGDDLIAI 72
Query: 253 KSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 312
KSGWDEYG+AYG PSS ITIRR+TGSSPF+G AVGSETSGGVE+VLAEH+N ++ G GIH
Sbjct: 73 KSGWDEYGMAYGRPSSHITIRRITGSSPFAGFAVGSETSGGVEHVLAEHLNFFSSGFGIH 132
Query: 313 VKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWG 372
+KTN GRGGFIRN+TVSDV +++ R G++IAGDVG HPDD+++ NALPVV+G+TIK+V G
Sbjct: 133 IKTNTGRGGFIRNVTVSDVTLDSVRYGLRIAGDVGGHPDDRYDRNALPVVDGLTIKNVQG 192
Query: 373 TKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSS 432
++++G I+G+ S F+ ICLSN+ L G G P KC VSG+A V+P PC+EL+S
Sbjct: 193 QNIREAGSIKGIATSAFSRICLSNVKLNG--GAAVRPWKCEAVSGAALDVQPSPCTELTS 250
Query: 433 SQQTGACSN 441
+ C+N
Sbjct: 251 TSGMSFCTN 259
>gi|125541363|gb|EAY87758.1| hypothetical protein OsI_09176 [Oryza sativa Indica Group]
Length = 545
Score = 355 bits (910), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 189/422 (44%), Positives = 254/422 (60%), Gaps = 20/422 (4%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R +TDFGGVGDG+ +NT+AF A+ I L GG L VP G +LT FNLTSHM
Sbjct: 80 RPKAYELTDFGGVGDGRAVNTEAFERAVKAIAALAERGGGQLNVPLGRWLTAPFNLTSHM 139
Query: 95 TLYLAKGAVIKAT----------------QDTWNWPLIAPLPSYGRGRERPGGRYMSFIH 138
TL+LA+G+ I +D WPL+ LPSYG GRER G R+ S IH
Sbjct: 140 TLFLAEGSEILGIPSFREVQKLVLLSGFDRDERYWPLMPALPSYGYGRERKGPRFGSLIH 199
Query: 139 GDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPF 198
G L+DVVITG NG+I+GQG +WW R+R L TRP L++ M S+ II++N+ +NSPF
Sbjct: 200 GQNLKDVVITGHNGSINGQGEVWWMKHRRRILNNTRPPLLQLMWSKDIIVANITLKNSPF 259
Query: 199 WNIHPVYCSNVVIRYVTILAPADS-PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWD 257
W+ HP C+N+ + VTILAP S PNTDGIDPDS +V IE+ YIS GDD +AVKSGWD
Sbjct: 260 WHFHPYDCTNITVSNVTILAPISSAPNTDGIDPDSCQDVLIENCYISVGDDAIAVKSGWD 319
Query: 258 EYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTN 316
+YGIAYG PS I IR V S S GI++GSE SGG+ NV E + ++ G+ +KT
Sbjct: 320 QYGIAYGRPSRNIVIRNVMARSLVSAGISIGSEMSGGIANVTVEDVRIWESRRGLRIKTA 379
Query: 317 IGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQ 376
IGRGG+I +I+ ++ +N R GI I D +H DD ++ +A P + I+ K++ G V+
Sbjct: 380 IGRGGYIHDISYRNITFDNVRAGIVIKVDYNEHADDGYDRDAFPDITNISFKEIHGRGVR 439
Query: 377 QSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQ 435
G + P I ++++ G++ +CS + G V P PC L +
Sbjct: 440 VPVRAHGSSDIPIKDISFQDMSI-GISYKKKHIFQCSFIEGRVIGSVFPKPCENLDLYNE 498
Query: 436 TG 437
G
Sbjct: 499 QG 500
>gi|147795580|emb|CAN69988.1| hypothetical protein VITISV_024399 [Vitis vinifera]
Length = 509
Score = 353 bits (906), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 191/429 (44%), Positives = 256/429 (59%), Gaps = 20/429 (4%)
Query: 33 RYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTS 92
R R ++TDFGGVGD T+NT+AF AI I L + GG L VP G +LT FNLTS
Sbjct: 69 RLRPAVYNLTDFGGVGDXVTVNTEAFERAISAISKLGKKGGGQLNVPAGNWLTAPFNLTS 128
Query: 93 HMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENG 152
HMTL+L + AVI QD WPL+ PLPSYG GRE G RY S IHG L+DVV+TG NG
Sbjct: 129 HMTLFLDQDAVILGIQDEKYWPLMPPLPSYGYGREHRGARYGSLIHGQNLKDVVVTGHNG 188
Query: 153 TIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIR 212
TI+GQG WW +RQ+ L TR L++ M S I+ISN+ ++SPFW +HP C NV I+
Sbjct: 189 TINGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVISNITLRDSPFWTLHPYDCKNVTIK 248
Query: 213 YVTILAPA-DSPNTDGID----------------PDSSSNVCIEDSYISTGDDLVAVKSG 255
VTILAP ++PNTDGID P+S ++ IED YIS GDD +A+KSG
Sbjct: 249 NVTILAPIFEAPNTDGIDPGKVTCTLYYFSDCICPNSCEDMVIEDCYISVGDDGIAIKSG 308
Query: 256 WDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVK 314
WD+YG+AYG PS I IR + S S G+++GSE SGGV NV E++ ++N + +K
Sbjct: 309 WDQYGVAYGRPSVNILIRNLVIRSMVSAGVSIGSEMSGGVSNVTVENLLVWNSRRAVRIK 368
Query: 315 TNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTK 374
T+ GRGG++++I ++ +N R GI I D +HPDD F+P ALP++ I+ V G
Sbjct: 369 TSPGRGGYVQHINYRNLTFDNVRVGIVIKTDYNEHPDDGFDPKALPILEDISFTGVHGQG 428
Query: 375 VQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSELSSS 433
V+ I G + P + ++++ G+ +C+ V G V P PC L
Sbjct: 429 VRVPVRIHGSEEIPVKKVTFRDMSV-GITYKKKHIFQCAYVEGRVIGTVFPAPCENLDRY 487
Query: 434 QQTGACSNH 442
+ H
Sbjct: 488 DEQEQLXKH 496
>gi|414885630|tpg|DAA61644.1| TPA: hypothetical protein ZEAMMB73_326074 [Zea mays]
Length = 516
Score = 351 bits (900), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 186/393 (47%), Positives = 247/393 (62%), Gaps = 7/393 (1%)
Query: 41 ITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAK 100
+ +FG VGDG+T+NT AF AI I GG L VP G +LT FNLTSHMTL+LA
Sbjct: 103 LREFGAVGDGRTVNTAAFESAIAAIA---ERGGGRLTVPAGRWLTAPFNLTSHMTLFLAA 159
Query: 101 GAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAI 160
GA I QD WPL++PLPSYG GRE G RY S IHG L+ V ITG NGTI+GQG
Sbjct: 160 GAEILGIQDERYWPLMSPLPSYGYGREHKGPRYGSLIHGQDLKHVTITGHNGTINGQGQS 219
Query: 161 WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP- 219
WW +R++ L TR L++ M S +IIISN+ ++SPFW +H C NV I TILAP
Sbjct: 220 WWVKFRRKLLNHTRGPLVQLMRSSNIIISNITLRDSPFWTLHTYDCKNVTISETTILAPI 279
Query: 220 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS 279
A +PNTDGIDPDS NV I++ YIS GDD +A+KSGWD+YGIAYG PS+ ITI+ V S
Sbjct: 280 AGAPNTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSANITIQNVVIRS 339
Query: 280 PFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK 338
S G+++GSE SGGV +VL E++++++ G+ +KT GRG ++ N+ ++ EN R
Sbjct: 340 MVSAGVSIGSEMSGGVSDVLVENVHVWDSRRGVRIKTAPGRGAYVTNVIYQNITFENVRV 399
Query: 339 GIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNIN 398
GI I D +HPD+ F+P A+P + I+ + G +V+ IQG P + +++
Sbjct: 400 GIVIKTDYNEHPDEGFDPKAVPTIGNISYTSIHGHRVRVPVRIQGSAQIPVKNVTFHDMS 459
Query: 399 LQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSEL 430
+ G+ +CS V G V P PC L
Sbjct: 460 I-GIVDKKHHVFQCSFVQGQVIGYVFPVPCKNL 491
>gi|242044796|ref|XP_002460269.1| hypothetical protein SORBIDRAFT_02g025730 [Sorghum bicolor]
gi|241923646|gb|EER96790.1| hypothetical protein SORBIDRAFT_02g025730 [Sorghum bicolor]
Length = 518
Score = 350 bits (899), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 186/393 (47%), Positives = 246/393 (62%), Gaps = 7/393 (1%)
Query: 41 ITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAK 100
+ +FG VGDG+T+NT AF AI I GG L VP G +LT FNLTSHM L+LA
Sbjct: 105 LREFGAVGDGRTVNTAAFESAIAAIA---ERGGGRLTVPAGRWLTAPFNLTSHMILFLAA 161
Query: 101 GAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAI 160
GA I QD WPL++PLPSYG GRE G RY S IHG L+DV ITG NGTI+GQG
Sbjct: 162 GAEILGIQDERYWPLMSPLPSYGYGREHKGPRYGSLIHGQDLKDVTITGHNGTINGQGQS 221
Query: 161 WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP- 219
WW +R++ L TR L++ M S IIISN+ ++SPFW +H C NV I TILAP
Sbjct: 222 WWVKFRRKLLNHTRGPLVQLMRSSDIIISNITLRDSPFWTLHTYDCKNVTISETTILAPI 281
Query: 220 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS 279
A +PNTDGIDPDS NV I++ YIS GDD +A+KSGWD+YGIAYG PS+ I I+ V S
Sbjct: 282 AGAPNTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSANIVIQNVVIRS 341
Query: 280 PFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK 338
S G+++GSE SGGV +VL E++++++ G+ +KT GRG ++ NI ++ +EN R
Sbjct: 342 MVSAGVSIGSEMSGGVSDVLVENVHVWDSRRGVRIKTAPGRGAYVTNIVYRNITLENVRV 401
Query: 339 GIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNIN 398
GI I D +HPD+ F+P A+P + I+ + G +V+ IQG P + +++
Sbjct: 402 GIVIKTDYNEHPDEGFDPKAVPTIGNISYTSIHGHRVRVPVRIQGSAEIPVKNVTFHDMS 461
Query: 399 LQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSEL 430
+ G+ +CS V G V P PC L
Sbjct: 462 I-GIVDKKHHVFQCSFVQGQVIGYVFPVPCKNL 493
>gi|326532444|dbj|BAK05151.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 530
Score = 350 bits (898), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 193/393 (49%), Positives = 250/393 (63%), Gaps = 7/393 (1%)
Query: 41 ITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAK 100
+ +FGGVGDG+TLNT AF A+ I GG L VP G +LT FNLTSHMTL+LA
Sbjct: 117 LREFGGVGDGRTLNTAAFEAAVAAISE---RGGGRLTVPAGRWLTAPFNLTSHMTLFLAA 173
Query: 101 GAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAI 160
GA I QD WPL++PLPSYG GRE G RY S IHG L+DV+ITG NGTI+GQG
Sbjct: 174 GAEILGVQDERYWPLMSPLPSYGYGREHKGPRYGSLIHGQDLKDVIITGHNGTINGQGQS 233
Query: 161 WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP- 219
WW +R++ L TR L++ M S +IIISN+ ++SPFW +H C NV I TILAP
Sbjct: 234 WWIKFRKKLLNHTRGPLVQLMRSSNIIISNITLRDSPFWTLHVYDCKNVTISGTTILAPI 293
Query: 220 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS 279
+PNTDGIDPDS NV IE+ YIS GDD VA+KSGWD+YGIAYG PS+ ITIR V S
Sbjct: 294 VGAPNTDGIDPDSCENVMIENCYISVGDDGVAIKSGWDQYGIAYGRPSTNITIRNVIIRS 353
Query: 280 PFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK 338
S G+++GSE SGGV NVL E++++++ G+ +KT GRG ++ NI ++ +EN R
Sbjct: 354 MVSAGVSIGSEMSGGVSNVLVENVHIWSSRRGVRIKTAPGRGAYVNNIVYRNITLENVRV 413
Query: 339 GIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNIN 398
GI I D +HPD+ F+P A+PV I+ + G +V+ IQG P + +++
Sbjct: 414 GIVIKTDYNEHPDELFDPKAVPVGGNISYTSIHGQRVRVPVRIQGSAEIPVRNVTFHDMS 473
Query: 399 LQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSEL 430
+ G+ +CS V G V P PC L
Sbjct: 474 V-GILDKKHHVFQCSFVQGQVIGYVFPVPCKNL 505
>gi|357158595|ref|XP_003578178.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 532
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 192/393 (48%), Positives = 248/393 (63%), Gaps = 7/393 (1%)
Query: 41 ITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAK 100
+ +FGG+GDG+TLNT AF A+ I GG L VP G +LT FNLTS MTL+LA
Sbjct: 119 LREFGGIGDGRTLNTAAFEAAVAAISE---RGGGRLTVPAGRWLTAPFNLTSGMTLFLAS 175
Query: 101 GAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAI 160
GA I QD WPL+ PLPSYG GRE G RY S IHG L+DV +TG NGTI+GQG
Sbjct: 176 GAEILGIQDERYWPLMPPLPSYGYGREHKGPRYGSLIHGQDLKDVTVTGHNGTINGQGKS 235
Query: 161 WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP- 219
WW +R++ L TR L++ M S +IIISN+ Q+SPFW +H C NV I TILAP
Sbjct: 236 WWTKFRRKLLNHTRGPLVQLMRSSNIIISNITLQDSPFWTLHTYDCKNVTISETTILAPI 295
Query: 220 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS 279
+PNTDGIDPDS NV I++ YIS GDD VA+KSGWD+YGIAYG PS+ ITIR VT S
Sbjct: 296 VGAPNTDGIDPDSCENVMIQNCYISVGDDGVAIKSGWDQYGIAYGRPSTNITIRDVTIRS 355
Query: 280 PFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK 338
S G+++GSE SGGV NVL E++++++ G+ +KT GRG ++ NI ++ +EN R
Sbjct: 356 MVSAGVSIGSEMSGGVSNVLVENVHIWSSRRGVRIKTAPGRGAYVNNIVYRNITLENVRV 415
Query: 339 GIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNIN 398
GI I D +HPD+ FNP A+P+V I+ + G V+ IQG P + +++
Sbjct: 416 GIVIKTDYNEHPDEGFNPKAVPIVGNISYTSIHGQGVRVPVRIQGSAEIPVKNVTFHDMS 475
Query: 399 LQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSEL 430
+ G+ +CS V G V P PC L
Sbjct: 476 V-GILDKKHHVFQCSYVQGQVIGYVFPVPCKNL 507
>gi|8954055|gb|AAF82228.1|AC069143_4 Contains similarity to a polygalacturonase-like protein gi|7529266
from Arabidopsis thaliana BAC F18P9 gb|AL138654 and
contains multiple polygalacturonase (pectinase) PF|00295
domains [Arabidopsis thaliana]
Length = 533
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 193/436 (44%), Positives = 258/436 (59%), Gaps = 32/436 (7%)
Query: 33 RYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTL-LYVPPGVYLTGSFNLT 91
R R + DFGGVGDG TLNT+AF A+ I L S G L VPPG +LT FNLT
Sbjct: 81 RLRPVVFDLKDFGGVGDGFTLNTEAFERAVISISKLGGSSGGGQLNVPPGRWLTAPFNLT 140
Query: 92 SHMTLYLAKGAVIKAT---------------------------QDTWNWPLIAPLPSYGR 124
SHMTL+LA+ + I QD WPL+ PLPSYG
Sbjct: 141 SHMTLFLAEDSEILGVEEHNLGDFETLRDGCVRLVYLTCHFNCQDEKYWPLMPPLPSYGY 200
Query: 125 GRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSR 184
GRERPG RY S IHG L+D+VITG NGTI+GQG WW ++R L +TR L++ M S
Sbjct: 201 GRERPGPRYGSLIHGQNLKDIVITGHNGTINGQGQSWWKKHQRRLLNYTRGPLVQIMWSS 260
Query: 185 SIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD-SPNTDGIDPDSSSNVCIEDSYI 243
I+I+N+ ++SPFW +HP C NV IR VTILAP +PNTDGIDPDS ++ IED YI
Sbjct: 261 DIVIANITMRDSPFWTLHPYDCKNVTIRNVTILAPVTGAPNTDGIDPDSCEDMVIEDCYI 320
Query: 244 STGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHI 302
STGDD +A+KSGWD++GIAYG PS+ I IR + S S G+++GSE SGG+ NV E++
Sbjct: 321 STGDDAIAIKSGWDQFGIAYGRPSTNILIRNLVVRSVISAGVSIGSEMSGGISNVTIENL 380
Query: 303 NLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVV 362
++N GI +KT GRGG+IRNIT ++ ++N R GI I D +H DD ++ A P++
Sbjct: 381 LIWNSRRGIRIKTAPGRGGYIRNITYKNLTLDNVRVGIVIKTDYNEHADDNYDRKAYPIL 440
Query: 363 NGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-Q 421
+G + + G V+ I G + P + ++++ G+ +CS V G +
Sbjct: 441 SGFSFAGIHGQGVRVPVRIHGSEQIPVRNVTFRDMSV-GLTYKKKHIFQCSFVKGRVFGS 499
Query: 422 VKPWPCSELSSSQQTG 437
+ P PC + G
Sbjct: 500 IFPRPCENFDVYDEEG 515
>gi|222641659|gb|EEE69791.1| hypothetical protein OsJ_29512 [Oryza sativa Japonica Group]
Length = 426
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 186/393 (47%), Positives = 251/393 (63%), Gaps = 7/393 (1%)
Query: 41 ITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAK 100
+ +FGGVGDG+TLNT+AF A+ I GG L VP G +LT FNLTS MTL+LA
Sbjct: 13 LREFGGVGDGRTLNTEAFVAAVASIAE---RGGGRLVVPAGRWLTAPFNLTSRMTLFLAA 69
Query: 101 GAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAI 160
GA I QD WPL++PLPSYG GRE G RY S IHG L+DV ITG+NGTI+GQG
Sbjct: 70 GAEILGVQDERYWPLMSPLPSYGYGREHRGPRYGSLIHGQDLKDVTITGQNGTINGQGQS 129
Query: 161 WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP- 219
WW+ +R++ L TR L++ M S +I ISN+ ++SPFW +H C +V I TILAP
Sbjct: 130 WWSKFRKKVLNHTRGPLVQLMRSSNITISNITLRDSPFWTLHIYDCKDVTISDTTILAPI 189
Query: 220 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS 279
+PNTDGIDPDS NV I++ YIS GDD +A+KSGWD+YGIAYG PS+ I I VT S
Sbjct: 190 VGAPNTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSTNIIIHNVTIRS 249
Query: 280 PFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK 338
S G+++GSE SGGV NVL E++++++ G+ +KT GRG ++ NIT ++ +E+ R
Sbjct: 250 MVSAGVSIGSEMSGGVSNVLVENVHIWDSRRGVRIKTAPGRGAYVSNITYRNITLEHIRV 309
Query: 339 GIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNIN 398
GI I D +HPD+ F+P A+P++ I+ + G V+ IQG P + +++
Sbjct: 310 GIVIKTDYNEHPDEGFDPKAVPIIENISYSSIHGHGVRVPVRIQGSAEIPVKNVTFHDMS 369
Query: 399 LQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSEL 430
+ G+ + +CS V G V P PC L
Sbjct: 370 V-GLVDRKNHVFQCSFVQGQVIGYVFPVPCKNL 401
>gi|115479361|ref|NP_001063274.1| Os09g0439400 [Oryza sativa Japonica Group]
gi|51091349|dbj|BAD36084.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|51091399|dbj|BAD36142.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113631507|dbj|BAF25188.1| Os09g0439400 [Oryza sativa Japonica Group]
gi|215768243|dbj|BAH00472.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 526
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 186/393 (47%), Positives = 251/393 (63%), Gaps = 7/393 (1%)
Query: 41 ITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAK 100
+ +FGGVGDG+TLNT+AF A+ I GG L VP G +LT FNLTS MTL+LA
Sbjct: 113 LREFGGVGDGRTLNTEAFVAAVASIAE---RGGGRLVVPAGRWLTAPFNLTSRMTLFLAA 169
Query: 101 GAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAI 160
GA I QD WPL++PLPSYG GRE G RY S IHG L+DV ITG+NGTI+GQG
Sbjct: 170 GAEILGVQDERYWPLMSPLPSYGYGREHRGPRYGSLIHGQDLKDVTITGQNGTINGQGQS 229
Query: 161 WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP- 219
WW+ +R++ L TR L++ M S +I ISN+ ++SPFW +H C +V I TILAP
Sbjct: 230 WWSKFRKKVLNHTRGPLVQLMRSSNITISNITLRDSPFWTLHIYDCKDVTISDTTILAPI 289
Query: 220 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS 279
+PNTDGIDPDS NV I++ YIS GDD +A+KSGWD+YGIAYG PS+ I I VT S
Sbjct: 290 VGAPNTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSTNIIIHNVTIRS 349
Query: 280 PFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK 338
S G+++GSE SGGV NVL E++++++ G+ +KT GRG ++ NIT ++ +E+ R
Sbjct: 350 MVSAGVSIGSEMSGGVSNVLVENVHIWDSRRGVRIKTAPGRGAYVSNITYRNITLEHIRV 409
Query: 339 GIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNIN 398
GI I D +HPD+ F+P A+P++ I+ + G V+ IQG P + +++
Sbjct: 410 GIVIKTDYNEHPDEGFDPKAVPIIENISYSSIHGHGVRVPVRIQGSAEIPVKNVTFHDMS 469
Query: 399 LQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSEL 430
+ G+ + +CS V G V P PC L
Sbjct: 470 V-GLVDRKNHVFQCSFVQGQVIGYVFPVPCKNL 501
>gi|218202213|gb|EEC84640.1| hypothetical protein OsI_31518 [Oryza sativa Indica Group]
Length = 526
Score = 347 bits (890), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 185/393 (47%), Positives = 251/393 (63%), Gaps = 7/393 (1%)
Query: 41 ITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAK 100
+ +FGGVGDG+TLNT+AF A+ I GG L VP G +LT FNLT+ MTL+LA
Sbjct: 113 LREFGGVGDGRTLNTEAFVAAVASIAE---RGGGRLVVPAGRWLTAPFNLTNRMTLFLAA 169
Query: 101 GAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAI 160
GA I QD WPL++PLPSYG GRE G RY S IHG L+DV ITG+NGTI+GQG
Sbjct: 170 GAEILGVQDERYWPLMSPLPSYGYGREHRGPRYGSLIHGQDLKDVTITGQNGTINGQGQS 229
Query: 161 WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP- 219
WW+ +R++ L TR L++ M S +I ISN+ ++SPFW +H C +V I TILAP
Sbjct: 230 WWSKFRKKVLNHTRGPLVQLMRSSNITISNITLRDSPFWTLHIYDCKDVTISDTTILAPI 289
Query: 220 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS 279
+PNTDGIDPDS NV I++ YIS GDD +A+KSGWD+YGIAYG PS+ I I VT S
Sbjct: 290 VGAPNTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSTNIIIHNVTIRS 349
Query: 280 PFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK 338
S G+++GSE SGGV NVL E++++++ G+ +KT GRG ++ NIT ++ +E+ R
Sbjct: 350 MVSAGVSIGSEMSGGVSNVLVENVHIWDSRRGVRIKTAPGRGAYVSNITYRNITLEHIRV 409
Query: 339 GIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNIN 398
GI I D +HPD+ F+P A+P++ I+ + G V+ IQG P + +++
Sbjct: 410 GIVIKTDYNEHPDEGFDPKAVPIIENISYSSIHGHGVRVPVRIQGSAEIPVKNVTFHDMS 469
Query: 399 LQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSEL 430
+ G+ + +CS V G V P PC L
Sbjct: 470 V-GLVDRRNHVFQCSFVQGQVIGYVFPVPCRNL 501
>gi|91806548|gb|ABE66001.1| glycoside hydrolase family 28 protein/polygalacturonase family
protein [Arabidopsis thaliana]
Length = 416
Score = 344 bits (883), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 174/404 (43%), Positives = 235/404 (58%), Gaps = 53/404 (13%)
Query: 32 MRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLT 91
+ R +TDFG VGDGKT NTKAFR AI ++ + GG L VPPG +LTGSFNLT
Sbjct: 38 LNCRKHSAILTDFGAVGDGKTSNTKAFRNAISKLSQMATDGGAQLVVPPGKWLTGSFNLT 97
Query: 92 SHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPG-GRYMSFIHGDGLQDVVITGE 150
SH TL++ +GA I A+QD WP+IAPLPSYG+GR+ G GR+ S I G L DVVITG
Sbjct: 98 SHFTLFIQRGATILASQDESEWPVIAPLPSYGKGRDGTGTGRFNSLISGTNLTDVVITGN 157
Query: 151 NGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVV 210
NGTI+GQG WW+ ++++ TRP LIE + S++I ISN+ +SP WNIHPVYC++V+
Sbjct: 158 NGTINGQGQYWWDKFKKKQFKITRPYLIEILFSKNIQISNITLIDSPSWNIHPVYCNSVI 217
Query: 211 IRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGI 270
++ VT+LAP PNTDGI+PDS +N IED YI +GDD +AVKSGWD+YGI
Sbjct: 218 VKSVTVLAPVTVPNTDGINPDSCTNTLIEDCYIVSGDDCIAVKSGWDQYGI--------- 268
Query: 271 TIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSD 330
KT +GRG ++++I
Sbjct: 269 -------------------------------------------KTAVGRGAYVKDIYARR 285
Query: 331 VYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT 390
+ M+ + ++G+ G HPD+ F+P ALP + I +D+ V S + G+ PFT
Sbjct: 286 ITMKTMKYVFWMSGNYGSHPDEGFDPKALPEITNINYRDMTAENVTMSASLDGIDKDPFT 345
Query: 391 GICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQ 434
GIC+SN+ + A C+DV+G +V P PCS L +
Sbjct: 346 GICISNVTIALAAKAKKMQWNCTDVAGVTSRVTPEPCSLLPEKK 389
>gi|326501406|dbj|BAK02492.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 378
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 165/330 (50%), Positives = 218/330 (66%), Gaps = 1/330 (0%)
Query: 105 KATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNM 164
+ D +WPLIAPLPSYGRGR+ PG RY +FI G L DV+I+G NGTI+GQG +WW+
Sbjct: 26 RPVLDLEDWPLIAPLPSYGRGRDEPGPRYSNFIGGSNLTDVIISGNNGTINGQGQVWWDK 85
Query: 165 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 224
+ + L +TR L+E + SR IIISNV F ++P WN+HP YC+NV I VTILAP SPN
Sbjct: 86 FHAKELDYTRGYLLELLYSRDIIISNVTFVDAPSWNLHPTYCTNVTISGVTILAPVHSPN 145
Query: 225 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG- 283
TDGIDPDSSS+V IED YI +GDD +AVKSGWDEYGI + PS I +RR+T SP S
Sbjct: 146 TDGIDPDSSSHVKIEDCYIVSGDDCIAVKSGWDEYGIRFNMPSQHIVVRRLTCISPTSAM 205
Query: 284 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 343
IA+GSE SGG+++V E N + +K+ +GRGGF+R++ V + + + +
Sbjct: 206 IALGSEMSGGIQDVRVEDNIAINTESAVRIKSGVGRGGFVRDVFVRRLSLHTMKWVFWMT 265
Query: 344 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 403
G+ G HPD+ +P ALP V GI +DV+ V +G ++G+ N P+TGIC+SN+ Q
Sbjct: 266 GNYGQHPDNSSDPKALPEVTGINYRDVFAENVTMAGRMEGIPNDPYTGICMSNVTAQLAP 325
Query: 404 GPTSPPLKCSDVSGSAYQVKPWPCSELSSS 433
C+DV G AY V P PC EL +
Sbjct: 326 KAKKLQWNCTDVQGVAYGVSPEPCPELGAE 355
>gi|224151097|ref|XP_002337059.1| predicted protein [Populus trichocarpa]
gi|222837934|gb|EEE76299.1| predicted protein [Populus trichocarpa]
Length = 356
Score = 330 bits (847), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 166/331 (50%), Positives = 220/331 (66%), Gaps = 3/331 (0%)
Query: 113 WPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPF 172
+PLI PLPSYGRGR+ G R+ S I G+ L DVVITG NGTIDGQG +WW +R L
Sbjct: 4 YPLIEPLPSYGRGRDADGARFSSLIFGNNLTDVVITGANGTIDGQGELWWTKFRAGELNH 63
Query: 173 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDS 232
TRP LIE M S +I ISN+ NSP WN+HPVYCSNVV++ +TILAP SPNTDGI+PDS
Sbjct: 64 TRPYLIEIMFSTNIQISNLTLINSPSWNVHPVYCSNVVVQGLTILAPVRSPNTDGINPDS 123
Query: 233 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETS 291
+N I+D YI +GDD VAVKSGWDEYGIA+G P+ + IRR+T SP S IA+GSE S
Sbjct: 124 CTNTKIQDCYIVSGDDCVAVKSGWDEYGIAFGMPTKQVVIRRLTCISPTSAVIALGSEMS 183
Query: 292 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 351
GG+E+V AE I + G+ +KT +GRGG++++I V + ++ + + G+ G HPD
Sbjct: 184 GGIEDVRAEDITAIDSESGVRIKTAVGRGGYVKDIYVRGMTLKTMKWVFWMTGNYGSHPD 243
Query: 352 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLK 411
+ ++PNA+PV+ I +DV V + ++G+ PFTGIC+SN+ +
Sbjct: 244 NNYDPNAIPVIQNINYRDVVAENVTMAARLEGIAGDPFTGICISNVTIGLARNRKKLQWN 303
Query: 412 CSDVSGSAYQVKPWPCSELSSS--QQTGACS 440
CSDV+G +V P PC LS + GAC+
Sbjct: 304 CSDVAGITSEVTPKPCDLLSDQGPGKIGACN 334
>gi|18397713|ref|NP_566292.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|30680007|ref|NP_850526.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|7549636|gb|AAF63821.1| unknown protein [Arabidopsis thaliana]
gi|332640933|gb|AEE74454.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332640934|gb|AEE74455.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 377
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 169/361 (46%), Positives = 245/361 (67%), Gaps = 4/361 (1%)
Query: 72 GGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGG 131
GG LYVPPG +LTGSF+LTSH+TL+L GAVI A+QD +W ++ PLPSYGRG + PG
Sbjct: 7 GGAQLYVPPGHWLTGSFSLTSHLTLFLENGAVIVASQDPSHWEVVDPLPSYGRGIDLPGK 66
Query: 132 RYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 191
RY S I+G+ L DVV+TG+NGTIDGQG +WW+ + +L + RP+LIEF++S ++I+SN+
Sbjct: 67 RYKSLINGNKLHDVVVTGDNGTIDGQGLVWWDRFTSHSLKYNRPHLIEFLSSENVIVSNL 126
Query: 192 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 251
F N+P ++I+ +Y S+V I + + SP T GI PDSS VCI++S I+ G D ++
Sbjct: 127 TFLNAPAYSIYSIYSSHVYIHKILAHSSPKSPYTIGIVPDSSDYVCIQNSTINVGYDAIS 186
Query: 252 VKSGWDEYGIAYGHPSSGITIRRV--TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGV 309
+KSGWDEYGIAY P+ + IR V G+S S I+ GSE SGG+ +V+ ++ +++
Sbjct: 187 LKSGWDEYGIAYSRPTENVHIRNVYLRGASG-SSISFGSEMSGGISDVVVDNAHIHYSLT 245
Query: 310 GIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKD 369
GI +T GRGG+I+ I +S++ M I G G HPDDK++ NALP+V+ I + +
Sbjct: 246 GIAFRTTKGRGGYIKEIDISNIDMLRIGTAIVANGSFGSHPDDKYDVNALPLVSHIRLSN 305
Query: 370 VWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSE 429
+ G + +G + G+K SPF+ + LSN++L +G +S +CS V GS+ V P PC E
Sbjct: 306 ISGENIGIAGKLFGIKESPFSSVTLSNVSLSMSSG-SSVSWQCSYVYGSSESVIPEPCPE 364
Query: 430 L 430
L
Sbjct: 365 L 365
>gi|302143796|emb|CBI22657.3| unnamed protein product [Vitis vinifera]
Length = 342
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 169/324 (52%), Positives = 214/324 (66%), Gaps = 7/324 (2%)
Query: 6 VTLSILLSYFNCFSLASVVTCSGIVPMRY-----RNDKISITDFGGVGDGKTLNTKAFRE 60
+ L++L+ F +A T S + P++Y R +TDFG GDGKT+NTKAF+
Sbjct: 15 IVLAVLILGLLSFRVAECQTSSFMEPIKYKALRCRKHSAVLTDFGATGDGKTINTKAFKS 74
Query: 61 AIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLP 120
AI + GG L VPPG +LTGSFNLTSH TLY+ K AVI QD +PLI LP
Sbjct: 75 AIDHLSQFADDGGAELIVPPGKWLTGSFNLTSHFTLYIDKDAVILGAQDESAYPLIEVLP 134
Query: 121 SYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEF 180
SYG GR+ GGR+ S I G L DVVITG NGT++GQG WW+ +R + TRP LIE
Sbjct: 135 SYGVGRD-GGGRHSSLIFGTNLTDVVITGGNGTLNGQGKYWWDKFRAKKYNDTRPYLIEI 193
Query: 181 MNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIED 240
M S + ISN+ +SP WN+HPVY NV+++ +TILAP DSPNTDGI+PDS V IED
Sbjct: 194 MYSNHVQISNLTLIDSPSWNVHPVYSRNVLVKDLTILAPIDSPNTDGINPDSCKKVRIED 253
Query: 241 SYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLA 299
+I +GDD +AVKSGWD+YG +G P+ + IRR+T SP S IA+GSE SGG++NV A
Sbjct: 254 CFIVSGDDCIAVKSGWDQYGYKFGMPTKDLLIRRLTCISPDSATIALGSEMSGGIKNVWA 313
Query: 300 EHINLYNVGVGIHVKTNIGRGGFI 323
E I + GI +KT IGRGG+I
Sbjct: 314 EDITAIDTQSGIRIKTGIGRGGYI 337
>gi|21593399|gb|AAM65366.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 377
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 168/361 (46%), Positives = 244/361 (67%), Gaps = 4/361 (1%)
Query: 72 GGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGG 131
GG LYVPPG +LTGSF+LTSH+TL+L AVI A+QD +W ++ PLPSYGRG + PG
Sbjct: 7 GGAQLYVPPGHWLTGSFSLTSHLTLFLENDAVIVASQDPSHWEVVDPLPSYGRGIDLPGK 66
Query: 132 RYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 191
RY S I+G+ L DVV+TG+NGTIDGQG +WW+ + +L + RP+LIEF++S ++I+SN+
Sbjct: 67 RYKSLINGNKLHDVVVTGDNGTIDGQGLVWWDRFTSHSLKYNRPHLIEFLSSENVIVSNL 126
Query: 192 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 251
F N+P ++I+ +Y S+V I + + SP T GI PDSS VCI++S I+ G D ++
Sbjct: 127 TFLNAPAYSIYSIYSSHVYIHKILAHSSPKSPYTIGIVPDSSDYVCIQNSTINVGYDAIS 186
Query: 252 VKSGWDEYGIAYGHPSSGITIRRV--TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGV 309
+KSGWDEYGIAY P+ + IR V G+S S I+ GSE SGG+ +V+ ++ +++
Sbjct: 187 LKSGWDEYGIAYSRPTENVHIRNVYLRGASG-SSISFGSEMSGGISDVVVDNAHIHYSLT 245
Query: 310 GIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKD 369
GI +T GRGG+I+ I +S++ M I G G HPDDK++ NALP+V+ I + +
Sbjct: 246 GIAFRTTKGRGGYIKEIDISNIDMLRIGTAIVANGSFGSHPDDKYDVNALPLVSHIRLSN 305
Query: 370 VWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSE 429
+ G + +G + G+K SPF+ + LSN++L +G +S +CS V GS+ V P PC E
Sbjct: 306 ISGENIGIAGKLFGIKESPFSSVTLSNVSLSMSSG-SSVSWQCSYVYGSSESVIPEPCPE 364
Query: 430 L 430
L
Sbjct: 365 L 365
>gi|255545182|ref|XP_002513652.1| Exopolygalacturonase precursor, putative [Ricinus communis]
gi|223547560|gb|EEF49055.1| Exopolygalacturonase precursor, putative [Ricinus communis]
Length = 452
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 171/398 (42%), Positives = 230/398 (57%), Gaps = 38/398 (9%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R +TDFGGVGDGKTLNTKAF+ AI + GG L VP G +LTGSFNLTSH
Sbjct: 54 RKHTAFLTDFGGVGDGKTLNTKAFQAAIANLSQYADDGGAELIVPAGKWLTGSFNLTSHF 113
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL+L +GA I A+Q+ ++P+IA LPS+G ++ P GR+ S I G L DVVITG NGTI
Sbjct: 114 TLFLHRGATILASQNEADFPIIAALPSFGVEKDFPDGRFSSLIRGINLTDVVITGNNGTI 173
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQGA WW+ + + +RP LI+ M + + ISN+ NSP W++HPVYCSNV+++ V
Sbjct: 174 DGQGAPWWDKFEKGLFKASRPLLIDIMYTDQLQISNITLVNSPSWHVHPVYCSNVLVQGV 233
Query: 215 TILAPADSPNTDGIDPD----SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGI 270
TI+AP + PNTDGI+P SS + + IST D
Sbjct: 234 TIIAPVEVPNTDGINPSRFLASSFHQYLNFPLISTSD----------------------- 270
Query: 271 TIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSD 330
+GIA+GSE SGG+ENV E I + + +KT GRGG++++I V
Sbjct: 271 -----------AGIALGSEMSGGIENVRVEDITAFTSQSAVRIKTAPGRGGYVKDIFVRR 319
Query: 331 VYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT 390
+ ++ + I+G+ HPDD F+PNAL + I +D+ V SG G + FT
Sbjct: 320 MTLQTMKYVFWISGNYKTHPDDGFDPNALAEIKNINYRDIVARNVNMSGAFDGFPTNHFT 379
Query: 391 GICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCS 428
GIC+SN+ +Q P P CS+V G + V P PCS
Sbjct: 380 GICMSNVTIQLSQTPKKPQWNCSNVEGVSSHVTPTPCS 417
>gi|320166922|gb|EFW43821.1| polygalacturonase [Capsaspora owczarzaki ATCC 30864]
Length = 448
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 166/406 (40%), Positives = 245/406 (60%), Gaps = 10/406 (2%)
Query: 30 VPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFN 89
+ + R+ +I D+G VGD T+NT F + + + +G +Y+PPG++++G+FN
Sbjct: 47 ITLPVRSKSFNIVDYGAVGDNVTVNTAVFNKIVALVA---ANGDGEIYIPPGIFVSGTFN 103
Query: 90 LTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPG-GRYMSFIHGDGLQDVVIT 148
LTSH+TL LA GAV+ + + + +I LPSYGRGRE RY S +HG+ L DVVIT
Sbjct: 104 LTSHVTLRLASGAVLAGSPNFADHEIIPALPSYGRGRETESIFRYSSLVHGENLDDVVIT 163
Query: 149 GENG--TIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYC 206
+NG IDG G WW R L +TR +L+E M + I++ NV +NSPFW IHP
Sbjct: 164 SDNGQGVIDGNGMGWWAAHRASNLTYTRGHLVELMYTTDIMLVNVELRNSPFWTIHPYSS 223
Query: 207 SNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHP 266
+NV++ VTI P DSPNTDG DPDS + V I++ + GDD +AVKSGWD GI YG P
Sbjct: 224 TNVLVSNVTINNPLDSPNTDGCDPDSCNQVVIQNCVFTVGDDCIAVKSGWDNPGIQYGVP 283
Query: 267 SSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRN 325
++ + IR +T +P S IA+GSE SGGV N+LA+ I +N GI +K+ GRGG++RN
Sbjct: 284 TTDVVIRNMTMHTPTSAAIAIGSEMSGGVSNLLAQDIRAFNCSSGIRLKSARGRGGYLRN 343
Query: 326 ITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLK 385
+T V + + + + I G H ++P A+P+++ I + ++ GT + G QGL
Sbjct: 344 LTFDGVTLNDVKTALSINDFYGQHESIFYDPLAVPIIDSIFMSNIVGTAITIPGDFQGLF 403
Query: 386 NSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELS 431
++ T + +SN++L V S CS +G+ + V P C +
Sbjct: 404 DAKITNVAISNVSLAVVG---SGSYTCSYATGTQHAVVPVLCDAFA 446
>gi|449532729|ref|XP_004173333.1| PREDICTED: probable polygalacturonase-like, partial [Cucumis
sativus]
Length = 332
Score = 310 bits (795), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 145/297 (48%), Positives = 209/297 (70%), Gaps = 3/297 (1%)
Query: 145 VVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPV 204
VV +GENGTIDGQG +WW +W RTL TR +L+E +NS +I+ISN+ F+NSPFW IHPV
Sbjct: 36 VVFSGENGTIDGQGKMWWELWWNRTLNHTRGHLVELINSHNILISNLTFKNSPFWTIHPV 95
Query: 205 YCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYG 264
YCSNVVI+ +TILAP ++PNTDGIDPDSS+NVCIED YI +GDDLVAVKSGWD+YGI
Sbjct: 96 YCSNVVIKDMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGINLA 155
Query: 265 HPSSGITIRRVTGSSP-FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFI 323
PSS I IRRV+G++P SG+ +GSE SGG+ N+ E +N+++ GI +K++ GRGG+I
Sbjct: 156 RPSSNIVIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIRIKSDQGRGGYI 215
Query: 324 RNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQG 383
N+++++ M + I+ + DHPD++F+P A+P V GI I ++ ++ ++ G
Sbjct: 216 ANVSITNFVMNRVKMAIRFSRGSNDHPDEQFDPKAVPKVKGIFITNLMSLNSTKAPVLYG 275
Query: 384 LKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACS 440
+ + + G+C+ N+ + G+ S C+ VSG + V P PC +L ++ + CS
Sbjct: 276 IAGTSYDGVCMKNVTILGLT--PSAKWHCAFVSGFSTSVFPTPCPQLQNTTFSSLCS 330
>gi|219887583|gb|ACL54166.1| unknown [Zea mays]
Length = 463
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 160/278 (57%), Positives = 195/278 (70%), Gaps = 3/278 (1%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHL--RRSGGTLLYVPPGVYLTGSFNLTS 92
R S+ DFGGVGDG T NT AFR A+ + GG +LYVP G +LTG FNLTS
Sbjct: 48 RAHTASVADFGGVGDGTTSNTAAFRSAVDHLSQYSGEGGGGGMLYVPAGKWLTGPFNLTS 107
Query: 93 HMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENG 152
H TLYL + AVI +QD WP++ PLPSYGRGR++ GGR+ S I G L DVVITG NG
Sbjct: 108 HFTLYLHQDAVILGSQDVGEWPIVDPLPSYGRGRDKVGGRFASLIGGSNLTDVVITGSNG 167
Query: 153 TIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIR 212
TIDGQGA+WW+ + + L +TR LIE M+S +I ISN+ NSP WNIHPVY SN+V++
Sbjct: 168 TIDGQGAMWWSKFHKNQLKYTRGYLIELMHSDTIYISNLTLLNSPAWNIHPVYSSNIVVQ 227
Query: 213 YVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITI 272
+TILAP +SPNTDGI+PDS S+V IED YI +GDD VA+KSGWDEYGI+YG PS I I
Sbjct: 228 GITILAPTNSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQHIVI 287
Query: 273 RRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGV 309
RR+T SP S IA+GSE SGG + + + GV
Sbjct: 288 RRLTCVSPTSAVIALGSEMSGGGVRAAPDDAHHHEAGV 325
>gi|167523647|ref|XP_001746160.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775431|gb|EDQ89055.1| predicted protein [Monosiga brevicollis MX1]
Length = 464
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 173/404 (42%), Positives = 242/404 (59%), Gaps = 11/404 (2%)
Query: 30 VPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFN 89
VP ++ ++T FG +GDG+ N+ A A+ +Q +SGG +Y+PPG +L FN
Sbjct: 65 VPQEHQERVFNLTAFGAIGDGRHNNSLAMAAALEAVQ---QSGGGTIYIPPGDFLLAPFN 121
Query: 90 LTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITG 149
+TSH+ LYL G++++AT +WP+I P+PSYG+GR+ PG R+ SF+HG L DV +TG
Sbjct: 122 MTSHLVLYLEAGSILRATDRLADWPIIPPMPSYGQGRDHPGPRHASFLHGFNLTDVTVTG 181
Query: 150 ENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNV 209
NGTI+ G IWW T +TR +L E M SR + +S++ +SPFW +HPVY +
Sbjct: 182 NNGTINATGDIWWARHNNGTEVYTRGHLYEVMWSRQLEVSHLTLTHSPFWTVHPVYSQDF 241
Query: 210 VIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSG 269
+TIL P SPNTDG+DPDS+ +V I D Y STGDD VA+KSGWD YG S+
Sbjct: 242 RAIDLTILNPPYSPNTDGVDPDSTRDVVIRDCYFSTGDDSVAIKSGWDVYGYTVNISSNN 301
Query: 270 ITIRRVTGSSP-FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITV 328
ITI SP +GI +GSE SGG+ NV A +I + G +KT +GRGG++ N+TV
Sbjct: 302 ITIENCVFHSPNAAGICLGSEMSGGIANVFARNITMTGCLQGFRIKTGMGRGGYVVNVTV 361
Query: 329 SDVYMENA-RKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS 387
DV +EN+ + + G G HP +NP A P V I++ + G Q + GL NS
Sbjct: 362 EDVVIENSIQLAVGYNGHYGGHP-AGYNPLATPHVYNISLINARGGNNTQIAELVGLPNS 420
Query: 388 PFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELS 431
F + N+++ G G T CSD+SG+A V P C L+
Sbjct: 421 QFRALRFQNVHITGKQGWT-----CSDISGTAQNVTPAACPSLA 459
>gi|357479389|ref|XP_003609980.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355511035|gb|AES92177.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 563
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 155/340 (45%), Positives = 214/340 (62%), Gaps = 4/340 (1%)
Query: 106 ATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMW 165
A D WPL+ PLPSYG GRERPG RY S IHG L+DVVITG NGTI+GQG WW +
Sbjct: 212 ADPDEKYWPLMPPLPSYGYGRERPGPRYGSLIHGQNLKDVVITGHNGTINGQGQAWWKKF 271
Query: 166 RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA-DSPN 224
RQ+ L +TR L++ M S I+I+++ ++SPFW +HP C N+ I+ VTILAP ++PN
Sbjct: 272 RQKRLNYTRGPLLQIMWSSDIVITDITLRDSPFWTLHPYDCKNLTIKGVTILAPVFEAPN 331
Query: 225 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-G 283
TDGIDPDS ++ IED YIS GDD +A+KSGWD+YGIAYG PS I IR + S S G
Sbjct: 332 TDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIMIRNLVVRSMVSAG 391
Query: 284 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 343
I++GSE SGG+ NV E++ +++ G+ +KT GRGG++R IT ++ EN R GI +
Sbjct: 392 ISIGSEMSGGISNVTVENLLVWDSRRGVRIKTAPGRGGYVRQITYRNITFENVRVGIVMK 451
Query: 344 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 403
D +HPDD ++P ALPV+ I+ +V+G V+ I G + P + ++++ G+
Sbjct: 452 TDYNEHPDDGYDPTALPVIRDISFTNVYGHGVRVPVRIHGSEEIPVRNVTFRDMSV-GLT 510
Query: 404 GPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTGACSNH 442
+C+ V G + P PC L + G H
Sbjct: 511 YKKKHIFQCAFVHGRVIGTIFPSPCENLDRYNEQGQLVKH 550
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 58/90 (64%), Gaps = 5/90 (5%)
Query: 28 GIVPMR----YRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVY 83
G VP+R R ++TDFGGVGDG TLNT+AF A+ I + GG L VPPG +
Sbjct: 59 GRVPVRPIPNMRPVVFNLTDFGGVGDGVTLNTEAFERAVSAISKFGKKGGAQLNVPPGRW 118
Query: 84 LTGSFNLTSHMTLYLAKGAVIKATQDTWNW 113
LT FNLTSH+TL+LA+ AVI A D NW
Sbjct: 119 LTAPFNLTSHITLFLAQDAVILAI-DRENW 147
>gi|326516252|dbj|BAJ88149.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 297
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 144/281 (51%), Positives = 202/281 (71%), Gaps = 3/281 (1%)
Query: 151 NGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVV 210
NGTIDGQG +WW +W RTL TR +LIE +NS +++ISNV +NSPFW +HPVYC NVV
Sbjct: 6 NGTIDGQGRMWWELWWNRTLNHTRGHLIELVNSTNVLISNVTLRNSPFWTVHPVYCRNVV 65
Query: 211 IRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGI 270
I+ +TILAP ++PNTDGIDPDSSS VCIED YI +GDDLVAVKSGWD+YGI+ G PSS I
Sbjct: 66 IKDLTILAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNI 125
Query: 271 TIRRVTGSSP-FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVS 329
I+RV+G++P SG+ GSE SGG+ NVL ++++N + +KT++GRGG+I NIT++
Sbjct: 126 IIQRVSGTTPTCSGVGFGSEMSGGISNVLVRDLHIWNSASAVRLKTDVGRGGYITNITIA 185
Query: 330 DVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPF 389
+V ME + I+ + DH DDK++ ALP+++GI I D+ G VQ++ +++ + + +
Sbjct: 186 NVTMEKVKVPIRFSRGSDDHSDDKYDRTALPMISGIHIVDIVGVDVQRAPMLEAVHGAVY 245
Query: 390 TGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 430
GIC N++L+ + +C V G A++V P PC EL
Sbjct: 246 EGICFRNVSLRAIRRQVR--WQCESVYGEAHEVFPAPCEEL 284
>gi|109509138|gb|ABG34278.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 307
Score = 304 bits (778), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 144/286 (50%), Positives = 197/286 (68%), Gaps = 3/286 (1%)
Query: 158 GAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL 217
G++WW +R +TL +TRP+L+E MNS ++ISN+ F NSPFW IHP+YCS+V+++ VTI
Sbjct: 1 GSMWWERFRNKTLDYTRPHLVELMNSTGVVISNLTFLNSPFWTIHPIYCSHVIVQNVTIR 60
Query: 218 APADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTG 277
AP DSPNTDGIDPDSS +VCIED YISTGDD++A+KSGWDEYGI+YG PS I IRR+ G
Sbjct: 61 APLDSPNTDGIDPDSSDDVCIEDCYISTGDDVIAIKSGWDEYGISYGRPSKNIIIRRLIG 120
Query: 278 SSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 337
+ SGIA+GSE SGGV +V AE I +N GI +KT+ GRGG++RNI +S+V + N +
Sbjct: 121 ETHSSGIAIGSEMSGGVSDVHAEDIVFFNSTTGIRIKTSPGRGGYVRNIFISNVSLANVK 180
Query: 338 KGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNI 397
I+ G G+HPD+ ++P A+P + IT KD+ G + +GL++G++ F ICL NI
Sbjct: 181 VAIRFTGRYGEHPDESYDPKAMPKIERITFKDIHGENITVAGLMEGIEGDNFINICLYNI 240
Query: 398 NLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSNHF 443
L + + P CS+V G + V P C L S C+ +
Sbjct: 241 TL---SVNSISPWNCSNVQGFSSLVFPQTCELLEESIFPDHCTECY 283
>gi|359490607|ref|XP_003634121.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like
[Vitis vinifera]
Length = 492
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 175/406 (43%), Positives = 240/406 (59%), Gaps = 10/406 (2%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
RN + +FG GDGKT NTKAF+ AI + GG L VPPG +LTGSFNLTSH
Sbjct: 38 RNHSAVVMEFGAAGDGKTSNTKAFKSAIDHLSKFADVGGAHLIVPPGKWLTGSFNLTSHF 97
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TLY+ K A+I +QD ++P++ LPSYG GR+ S I G L DVVITG NGT
Sbjct: 98 TLYIHKDAIILGSQDESDYPIVKALPSYGGT----AGRFSSLILGTNLTDVVITGGNGTT 153
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
+GQG WW+ + ++ L TRPNLIE + S + I+ + +SP WN+HP+Y NV+I+ +
Sbjct: 154 NGQGKPWWDKFHEKRLNATRPNLIEIVFSYQVQITXTLI-DSPSWNVHPIYSRNVIIQGL 212
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
TI+AP PNTDGI+PDS +N+ +ED YI +GDD +AVKS +E G+ G P+ G+ IRR
Sbjct: 213 TIIAPVTVPNTDGINPDSCTNIRVEDCYIVSGDDSIAVKSALNENGVKCGMPTEGLIIRR 272
Query: 275 VTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
+T SP S IA+G E +G + NV AE I + GI +KT + RGG++++I V + M
Sbjct: 273 LTCISPHSAVIALGREMAGXM-NVRAEDITAIDXQFGIRIKTGLERGGYVKDIYVRRMTM 331
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
+ R I GD G P + PV+ GI +D+ V + G+ PFTG C
Sbjct: 332 KTMRFAFWIIGDYGPPPAPG---HEGPVIEGINYRDMVADNVTYPAQLHGISGGPFTGFC 388
Query: 394 LSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGAC 439
+SN+ + C +V G +V P PC LS S++ C
Sbjct: 389 ISNVTIGLTEESRKQQWDCDEVQGITSRVTPQPCDLLSPSKEILNC 434
>gi|125583899|gb|EAZ24830.1| hypothetical protein OsJ_08610 [Oryza sativa Japonica Group]
Length = 489
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 169/406 (41%), Positives = 230/406 (56%), Gaps = 44/406 (10%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R +TDFGGV DG+ +FRE +Q L V L+G
Sbjct: 80 RPKAYELTDFGGVWDGRA----SFRE----VQKL-------------VLLSG-------- 110
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
+D WPL+ LPSYG GRER G R+ S IHG L+DVVITG NG+I
Sbjct: 111 -----------FDRDERYWPLMPALPSYGYGRERKGPRFGSLIHGQNLKDVVITGHNGSI 159
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
+GQG +WW R+R L TRP L++ M S+ II++N+ +NSPFW+ HP C+N+ + V
Sbjct: 160 NGQGEVWWMKHRRRILNNTRPPLLQLMWSKDIIVANITLKNSPFWHFHPYDCTNITVSNV 219
Query: 215 TILAPADS-PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIR 273
TILAP S PNTDGIDPDS +V IE+ YIS GDD +AVKSGWD+YGIAYG PS I IR
Sbjct: 220 TILAPISSAPNTDGIDPDSCQDVLIENCYISVGDDAIAVKSGWDQYGIAYGRPSRNIVIR 279
Query: 274 RVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVY 332
V S S GI++GSE SGG+ NV E + ++ G+ +KT IGRGG+IR+I+ ++
Sbjct: 280 NVMARSLVSAGISIGSEMSGGIANVTVEDVRIWESRRGLRIKTAIGRGGYIRDISYRNIT 339
Query: 333 MENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGI 392
+N R GI I D +H DD ++ +A P + I+ K++ G V+ G + P I
Sbjct: 340 FDNVRAGIVIKVDYNEHADDGYDRDAFPDITNISFKEIHGRGVRVPVRAHGSSDIPIKDI 399
Query: 393 CLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTG 437
++++ G++ +CS + G V P PC L + G
Sbjct: 400 SFQDMSI-GISYKKKHIFQCSFIEGRVIGSVFPKPCENLDLYNEQG 444
>gi|29121121|gb|AAO62947.1| putative polygalacturonase-like protein [Lactuca sativa]
gi|29121352|gb|AAO62948.1| putative polygalacturonase-like protein [Lactuca sativa]
Length = 193
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 149/193 (77%), Positives = 166/193 (86%), Gaps = 1/193 (0%)
Query: 226 DGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIA 285
DGIDPDSSS+VCIEDSYISTGDDLVAVKSGWD+YGI Y PS+ ITIRR+TGSSPF+GIA
Sbjct: 1 DGIDPDSSSHVCIEDSYISTGDDLVAVKSGWDQYGIKYARPSNDITIRRLTGSSPFAGIA 60
Query: 286 VGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGD 345
+GSETSGGV NVLAEHI L N+G+GIH+KTNIGRGG IRNITVSDVYM N RKGIKI+ D
Sbjct: 61 IGSETSGGVYNVLAEHITLKNMGIGIHLKTNIGRGGIIRNITVSDVYMVNVRKGIKISAD 120
Query: 346 VGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG-VAG 404
VGDHPD +NPNALPV+ + IK+VWG KVQQ+GLI GLKNSPFT ICLSNINLQG +
Sbjct: 121 VGDHPDKNYNPNALPVLKHVRIKNVWGKKVQQAGLIHGLKNSPFTDICLSNINLQGPIIS 180
Query: 405 PTSPPLKCSDVSG 417
+ P KCS VSG
Sbjct: 181 TRNVPWKCSYVSG 193
>gi|223949035|gb|ACN28601.1| unknown [Zea mays]
Length = 376
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 145/277 (52%), Positives = 190/277 (68%), Gaps = 1/277 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R ++IT+FG VGDG+TLNT F+ A++ ++ GG LYVP G +LTGSFNLTSH+
Sbjct: 40 RPHSVTITEFGAVGDGRTLNTVPFQNAVFYVRSFADKGGAQLYVPRGRWLTGSFNLTSHL 99
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TLYL +GAVI +D+ W ++ PLPSYG+G + PG R+ S I G L DVVITG NG I
Sbjct: 100 TLYLEEGAVIVGAKDSSQWLIVEPLPSYGQGLDLPGPRHQSLISGYNLTDVVITGNNGVI 159
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQG +WW R L +RPNL+EF+ S I+ISN+ F NSP W+IHPVYCSNV + V
Sbjct: 160 DGQGLVWWQWLRSHELNHSRPNLLEFLYSEDIVISNLTFLNSPAWSIHPVYCSNVKVHNV 219
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
TI D+P TDGI PDS SN+CIEDS IS + +++KSGWD YGI++G P+S I I R
Sbjct: 220 TIKTSLDAPLTDGIVPDSCSNLCIEDSTISVSHEAISLKSGWDRYGISFGRPTSDIRISR 279
Query: 275 VT-GSSPFSGIAVGSETSGGVENVLAEHINLYNVGVG 310
V SS + +A GSE SGG+ ++ H+ +++ G
Sbjct: 280 VDLLSSSGAALAFGSEMSGGISDIHVNHLRIHDSSKG 316
>gi|194696678|gb|ACF82423.1| unknown [Zea mays]
Length = 335
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 144/273 (52%), Positives = 189/273 (69%), Gaps = 1/273 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R ++IT+FG VGDG+TLNT F+ A++ ++ GG LYVP G +LTGSFNLTSH+
Sbjct: 40 RPHSVTITEFGAVGDGRTLNTVPFQNAVFYVRSFADKGGAQLYVPRGRWLTGSFNLTSHL 99
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TLYL +GAVI +D+ W ++ PLPSYG+G + PG R+ S I G L DVVITG NG I
Sbjct: 100 TLYLEEGAVIVGAKDSSQWLIVEPLPSYGQGLDLPGPRHQSLISGYNLTDVVITGNNGVI 159
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQG +WW R L +RPNL+EF+ S I+ISN+ F NSP W+IHPVYCSNV + V
Sbjct: 160 DGQGLVWWQWLRSHELNHSRPNLLEFLYSEDIVISNLTFLNSPAWSIHPVYCSNVKVHNV 219
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
TI D+P TDGI PDS SN+CIEDS IS + +++KSGWD YGI++G P+S I I R
Sbjct: 220 TIKTSLDAPLTDGIVPDSCSNLCIEDSTISVSHEAISLKSGWDRYGISFGRPTSDIRISR 279
Query: 275 VT-GSSPFSGIAVGSETSGGVENVLAEHINLYN 306
V SS + +A GSE SGG+ ++ H+ +++
Sbjct: 280 VDLLSSSGAALAFGSEMSGGISDIHVNHLRIHD 312
>gi|297745346|emb|CBI40426.3| unnamed protein product [Vitis vinifera]
Length = 379
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 147/267 (55%), Positives = 181/267 (67%), Gaps = 11/267 (4%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R S+ DFGGVGDG+TLNTKAF++A+ + GG LYVP G +LTGSF+LTSH
Sbjct: 45 RAHSASLVDFGGVGDGQTLNTKAFQDAVSELSKYGSEGGAQLYVPAGKWLTGSFSLTSHF 104
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL+L + AV+ A+QD WP+I PLPSYGRGR+ GRY S I G L DV+ITG+NGTI
Sbjct: 105 TLFLHRDAVLLASQDISQWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIITGDNGTI 164
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQG +WW + L +TRP LIE M S I ISN+ NSP WN+HPVY N++I+ +
Sbjct: 165 DGQGGLWWQRFHGGKLKYTRPYLIELMYSADIQISNLTLLNSPSWNVHPVYSRNILIQGI 224
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYG-HPSSGITI- 272
TILAP SPNTDGI+PDS +N IED YI +GDD VAVKSGWDEYGIAY H + +
Sbjct: 225 TILAPVRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYDWHRERRLYMV 284
Query: 273 -------RRVTG--SSPFSGIAVGSET 290
R+ G S PF+GI + + T
Sbjct: 285 AENVSMAARLEGIPSDPFTGICISNVT 311
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 375 VQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSS- 433
V + ++G+ + PFTGIC+SN+ + A P C+DV G + V P PCS L
Sbjct: 288 VSMAARLEGIPSDPFTGICISNVTIHLAAKAKKVPWTCTDVEGISSGVTPTPCSTLPDQG 347
Query: 434 -QQTGACS 440
++T C+
Sbjct: 348 PEKTSLCN 355
>gi|4490311|emb|CAB38802.1| putative protein [Arabidopsis thaliana]
gi|7270292|emb|CAB80061.1| putative protein [Arabidopsis thaliana]
Length = 462
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 181/429 (42%), Positives = 251/429 (58%), Gaps = 56/429 (13%)
Query: 24 VTCSGIVPMRYRNDKI--SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPG 81
VTCSG ++I SITDFGGVGDGKT NT AFR A+ ++ GG L VP G
Sbjct: 55 VTCSGFFNHDPFPNRIVMSITDFGGVGDGKTSNTAAFRRAVRHLEGFAAEGGAQLNVPEG 114
Query: 82 VYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDG 141
+L+GSFNLTS+ TL+L +GA+I ++D WP+I PLPSYGRGRERPGGR++S IHGD
Sbjct: 115 TWLSGSFNLTSNFTLFLERGALILGSKDLDEWPIIEPLPSYGRGRERPGGRHISLIHGDN 174
Query: 142 LQDVVIT-----------------GENGTIDGQ--GAIWWNMWRQRTLPFTRPNLIEFMN 182
L +VVIT + G G G W + R+ L +N
Sbjct: 175 LTNVVITVSVLRFSVMIKEKMGQLMDRGKCGGSYGGTEHWCI-REAIL----------LN 223
Query: 183 SRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSY 242
SR++IIS S ++ + S I ++ DSS+NVCIED Y
Sbjct: 224 SRTLIIS------SSLTSLCSILLSGQSILFIA---------------DSSTNVCIEDCY 262
Query: 243 ISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS-PFSGIAVGSETSGGVENVLAEH 301
I +GDDLVAVKSGWD+YG+A PSS I IRR++G++ SG+ +GSE SGG+ N+ E
Sbjct: 263 IESGDDLVAVKSGWDQYGMAVARPSSNIVIRRISGTTRTCSGVGIGSEMSGGIFNITVED 322
Query: 302 INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPV 361
I++++ G+ +KT+ GRGG+I NIT ++V +E + I+ + DH DDK++P ALP
Sbjct: 323 IHVWDSAAGLRIKTDKGRGGYISNITFNNVLLEKVKVPIRFSSGSNDHSDDKWDPKALPR 382
Query: 362 VNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQ 421
V GI I +V +++ ++ G++ + F +CL N+ L G+ P + KC DVSG A
Sbjct: 383 VKGIYISNVVSLNSRKAPMLLGVEGTSFQDVCLRNVTLLGL--PKTEKWKCKDVSGYASD 440
Query: 422 VKPWPCSEL 430
V P C +L
Sbjct: 441 VFPLSCPQL 449
>gi|297816102|ref|XP_002875934.1| hypothetical protein ARALYDRAFT_906150 [Arabidopsis lyrata subsp.
lyrata]
gi|297321772|gb|EFH52193.1| hypothetical protein ARALYDRAFT_906150 [Arabidopsis lyrata subsp.
lyrata]
Length = 443
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 157/398 (39%), Positives = 219/398 (55%), Gaps = 40/398 (10%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R +TDFG +GDGKT NTKAFREAI + GG+ L VP G +LTGSFNLTSH
Sbjct: 51 RRQSAILTDFGAIGDGKTSNTKAFREAIRNLTSRAGDGGSQLIVPKGKWLTGSFNLTSHF 110
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL++ +GA I A+QD +P++ LPSY R+ S I+G L DVVI G+ GTI
Sbjct: 111 TLHIKEGATILASQDESEYPMLQVLPSYR------DTRFASLIYGSNLTDVVIAGDKGTI 164
Query: 155 DGQGAIWWNMWRQRTLP-FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRY 213
+GQG WW +R RP LIE +S ++ ISN+ +SP W+IHPVYC NV+I+
Sbjct: 165 NGQGKSWWAKYRNGGFKSIQRPMLIEIQSSENVQISNINLIDSPMWSIHPVYCRNVIIKG 224
Query: 214 VTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIR 273
V I P DS NTDGI+P G P + IR
Sbjct: 225 VKISNPIDSANTDGINP--------------------------------VGRPIEMLLIR 252
Query: 274 RVTGSSPF-SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVY 332
R + +P +GIA+GSE SGG++ V E + L+N I ++T +GRGG+++N+
Sbjct: 253 RFSCIAPNGAGIAMGSEMSGGIKGVRMEDVTLHNTQSAIKIETAMGRGGYVQNVWARRFT 312
Query: 333 MENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGI 392
++ ++ + G P D P A PVV I +D+ G V S ++G+K++PFTG+
Sbjct: 313 IKTSKYVFLMTGSHKPIPRDGNIPKAKPVVTNINFRDITGENVSTSAKLEGMKSNPFTGV 372
Query: 393 CLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 430
C+SN+++ + C D+ G + VKP PCS L
Sbjct: 373 CMSNVSISLSPNASKQQFHCMDIVGESRSVKPQPCSLL 410
>gi|238005826|gb|ACR33948.1| unknown [Zea mays]
Length = 256
Score = 281 bits (718), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 135/200 (67%), Positives = 160/200 (80%), Gaps = 1/200 (0%)
Query: 31 PMRYRNDKISITDFGGVGDGKTLNT-KAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFN 89
P R +S+ FG GDG+TLNT R + GGTLLYVPPGV+LTG FN
Sbjct: 36 PAPRRGAWMSVASFGARGDGQTLNTGAFARAVARIARRRGARGGTLLYVPPGVWLTGPFN 95
Query: 90 LTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITG 149
LTSHMTL+LA+GA+++ATQDT +WPLI PLPSYGRGRE PGGRYMS IHG GLQDV ITG
Sbjct: 96 LTSHMTLFLARGAIVRATQDTSSWPLIDPLPSYGRGRELPGGRYMSLIHGHGLQDVFITG 155
Query: 150 ENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNV 209
ENGTIDGQG +WW+MW++RTLPFTRP+L+E M S +++SN++FQ+SPFWNIHPVYCSNV
Sbjct: 156 ENGTIDGQGGVWWDMWKKRTLPFTRPHLLELMYSTDVVVSNLVFQDSPFWNIHPVYCSNV 215
Query: 210 VIRYVTILAPADSPNTDGID 229
VI +T+LAP DSPNTDGID
Sbjct: 216 VIANLTVLAPHDSPNTDGID 235
>gi|302143795|emb|CBI22656.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 135/230 (58%), Positives = 169/230 (73%), Gaps = 1/230 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R +T+FGG+GDGKT NTKAF+ AI ++ GG L VPPG +LTGSFNLTSH
Sbjct: 45 RKHSALLTEFGGIGDGKTSNTKAFKTAIDHLKQFATDGGAELIVPPGKWLTGSFNLTSHF 104
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TLY+ K AVI +Q+ ++P I PLPSYG+GR+ GGR+ S I G L DVVI G NGTI
Sbjct: 105 TLYIHKDAVILGSQEESDYPHIPPLPSYGKGRDG-GGRFSSLIFGTNLTDVVIIGGNGTI 163
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
+GQG +WW+ ++Q+ L TRP LIE M S + ISN+ +SP WN+HPVYCS+V+I+ +
Sbjct: 164 NGQGRVWWDKFKQKKLVDTRPYLIEIMFSDQVQISNLTLIDSPSWNVHPVYCSDVIIQGM 223
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYG 264
TILAP D PNTDGI+PDS +NV IED YI +GDD +AVKSGWD+YGI YG
Sbjct: 224 TILAPVDVPNTDGINPDSCANVKIEDCYIVSGDDCIAVKSGWDQYGIKYG 273
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 146/281 (51%), Positives = 178/281 (63%), Gaps = 9/281 (3%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R +TDFG GDGKT+NTKAF+ AI + + GG L VPPG +LTGSFNLTSH
Sbjct: 297 RKHSAVLTDFGAKGDGKTMNTKAFKSAIANLSQVAGDGGAQLIVPPGKWLTGSFNLTSHF 356
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL++ K AVI QD +PLI LPSYG GR+ GGR+ S I G L DVVITG NGTI
Sbjct: 357 TLFVHKDAVILGAQDEAAYPLIEILPSYGAGRDG-GGRHASLIFGTNLTDVVITGGNGTI 415
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
GQG WW+ +R L TRP LIE M S + ISN+I +SP WN+HP Y SNV+I+++
Sbjct: 416 HGQGQYWWDKFRADKLKDTRPYLIEIMYSDQVQISNLILIDSPSWNVHPTYSSNVIIQWL 475
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
TI+AP SPNTDGI+PDSS NV IED +I +GDD +AVKSGWD+YGI G +
Sbjct: 476 TIIAPVGSPNTDGINPDSSKNVLIEDCFIVSGDDCIAVKSGWDQYGIKCGKGRIYMVAEN 535
Query: 275 VTGSS--------PFSGIAVGSETSGGVENVLAEHINLYNV 307
VT S+ PF+GI + + G E N NV
Sbjct: 536 VTYSARLDGISGDPFTGICISNVKIGLTEKPKKLQWNCTNV 576
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 375 VQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQ 434
V S + G+ PFTGIC+SN+ + P C++V G + QV P C L S+
Sbjct: 536 VTYSARLDGISGDPFTGICISNVKIGLTEKPKKLQWNCTNVEGVSSQVTPPSCDLLHPSK 595
Query: 435 QTGAC 439
+ C
Sbjct: 596 KVFNC 600
>gi|357139199|ref|XP_003571172.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 266
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 123/182 (67%), Positives = 148/182 (81%), Gaps = 5/182 (2%)
Query: 24 VTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVY 83
V C+G VP R R + +SIT+FGGVGDG+TLNT A R+A+YRIQ GT L +P G +
Sbjct: 88 VACAGAVPERPRPEVVSITEFGGVGDGRTLNTWALRKAVYRIQ-----CGTTLLLPVGTW 142
Query: 84 LTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQ 143
L+GSFNLTSHMTL+LA+GAV+KATQDT +W L+ PLPSYGRGRE PG RY SFIHG+GL+
Sbjct: 143 LSGSFNLTSHMTLFLARGAVLKATQDTRSWLLMEPLPSYGRGRELPGARYASFIHGNGLR 202
Query: 144 DVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHP 203
DVVITG+ G IDGQG +WWNMWR+RTL TRPNL+EF++S I ISNV+ +NS FWNIHP
Sbjct: 203 DVVITGDKGVIDGQGDVWWNMWRRRTLQHTRPNLVEFVHSSGIHISNVVLKNSLFWNIHP 262
Query: 204 VY 205
VY
Sbjct: 263 VY 264
>gi|219120807|ref|XP_002185635.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582484|gb|ACI65105.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 451
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 170/431 (39%), Positives = 228/431 (52%), Gaps = 46/431 (10%)
Query: 34 YRNDKISITDFGGVGDG-KTLNTKAFREAIYRIQHLRRSGGTLLYVPPG------VYLTG 86
+R+ ++ + D+ +G + +T AF +AI I R +GG L +P +Y
Sbjct: 6 HRHLELDVQDYQSSQNGGRRDDTAAFEQAIDII---RSNGGGRLIIPGAPDGSFNLYRIR 62
Query: 87 SFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVV 146
NLTSH+ L+L K AVI A D WPLI PLPSYG+GR+ G RY S +HG+ L ++
Sbjct: 63 PINLTSHLVLFLQKNAVITAIADESVWPLIPPLPSYGQGRDHVGPRYSSLLHGEYLTNIT 122
Query: 147 ITGEN---GTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHP 203
I GE G IDGQG WW+ R +TR +L+EFM S I + N+ QNSPFW H
Sbjct: 123 IRGEPDSPGIIDGQGRYWWDRRRHNRDRYTRGHLVEFMYSSRIRMYNLRLQNSPFWTNHF 182
Query: 204 VYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAY 263
C +V ++ V + AP SPNTDG DPDSS NV IEDS GDD VA+KSGWD +GI Y
Sbjct: 183 YDCDDVHVQNVHVKAPWSSPNTDGWDPDSSRNVLIEDSTYRGGDDCVAIKSGWDCFGIDY 242
Query: 264 GHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFI 323
PS ITIR VT P++GIA+G+E SGGV NV E++ ++KT RGG++
Sbjct: 243 DTPSENITIRNVTCQGPYAGIAIGTEMSGGVRNVTVENVTFTYANKPANIKTGNTRGGYV 302
Query: 324 RNITVSDVYMENARKGIKIAG--DVGDHPD-------------DKFNPNALPVVNGITIK 368
++ VY + I+I G D H D + + PN LP + +
Sbjct: 303 HDV----VY-----QNIRITGHIDQAIHVDMYHYHNTPNPSCSNNYQPNQLPHLRDLYFF 353
Query: 369 DVWGTKV----QQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQ--V 422
+ GT+ + GL SP + L NI+ +S CS+V GS V
Sbjct: 354 NFEGTQALTESHEVFHFVGLPESPIEYVFLENISFPTPV--SSLGWNCSNVQGSVKNNSV 411
Query: 423 KPW-PCSELSS 432
PW PC E S
Sbjct: 412 TPWPPCPEFPS 422
>gi|413941562|gb|AFW74211.1| hypothetical protein ZEAMMB73_002485 [Zea mays]
Length = 291
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/192 (63%), Positives = 146/192 (76%), Gaps = 1/192 (0%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTL-LYVPPGVYLTGSFNLTSHMTLYL 98
S+ +FG VGDG TLNT AFR A+ + GG L VPPG +LTGSFNLTS TL+L
Sbjct: 89 SVEEFGAVGDGATLNTAAFRRAVAELGARAVGGGGARLDVPPGRWLTGSFNLTSRFTLFL 148
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
+GAVI +QD WPLI PLPSYGRGRER G R++S IHG+GL DVVITG NGTIDGQG
Sbjct: 149 HRGAVILGSQDPEEWPLITPLPSYGRGRERLGPRHISLIHGEGLNDVVITGSNGTIDGQG 208
Query: 159 AIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILA 218
+WW +WR RTL TR +LIE +NS +++IS+V NSPFW +HPVYCSNVV++ +TILA
Sbjct: 209 HMWWELWRNRTLNHTRGHLIELVNSTNVLISSVTLSNSPFWTVHPVYCSNVVMKDLTILA 268
Query: 219 PADSPNTDGIDP 230
P D+PNTDGIDP
Sbjct: 269 PLDAPNTDGIDP 280
>gi|413949760|gb|AFW82409.1| hypothetical protein ZEAMMB73_244455 [Zea mays]
Length = 313
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 122/209 (58%), Positives = 151/209 (72%), Gaps = 1/209 (0%)
Query: 108 QDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQ 167
+D +WPLIAPLPSYGRGR+ PG RY +FI G L DV+ITG+NGTI+G+G +WW+ +
Sbjct: 24 KDMKHWPLIAPLPSYGRGRDEPGARYSNFIGGSNLTDVIITGKNGTINGKGQVWWDKFHA 83
Query: 168 RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDG 227
+ L F R +L+E + S +IIISNV F N+P+WN+HP YC+NV I VTILAP +SPNTDG
Sbjct: 84 KELKFIRGHLLELLYSENIIISNVTFVNAPYWNLHPTYCTNVTISGVTILAPVNSPNTDG 143
Query: 228 IDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAV 286
IDP SSS V IED YI +GDD VAVKSGWDEYGI + PS I I+R+T SP S IA+
Sbjct: 144 IDPKSSSRVKIEDCYIVSGDDCVAVKSGWDEYGIRFNMPSQHIVIQRLTSVSPTSAMIAL 203
Query: 287 GSETSGGVENVLAEHINLYNVGVGIHVKT 315
SE SGG+ +V A+ N I VKT
Sbjct: 204 SSEMSGGIRDVRAKDSVAINTESAIRVKT 232
>gi|388521929|gb|AFK49026.1| unknown [Lotus japonicus]
Length = 388
Score = 247 bits (631), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 125/262 (47%), Positives = 164/262 (62%), Gaps = 3/262 (1%)
Query: 172 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 231
TRP +IE M S I ISN+ NSP W +HP+Y S+++I+ +TILAP DSPNTDGIDPD
Sbjct: 124 LTRPYMIEIMYSNQIQISNLTLVNSPSWFVHPIYSSDIIIQGLTILAPVDSPNTDGIDPD 183
Query: 232 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSET 290
S SN IED YI +GDD +AVKSGWDEYGI G PS I IRR+T SP S IA+GSE
Sbjct: 184 SCSNTRIEDCYIVSGDDCIAVKSGWDEYGIKVGMPSQHIIIRRLTCISPDSAMIALGSEM 243
Query: 291 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 350
SGG++++ AE + N + +KT +GRG ++RNI V + + + + G G HP
Sbjct: 244 SGGIQDIRAEDLTAINTQSAVRIKTAVGRGAYVRNIFVEGMNLFTMKYVFWMTGSYGSHP 303
Query: 351 DDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPL 410
D F+P ALP + GI +DV V ++G+ N PFTGIC+SN N++ V +
Sbjct: 304 DTGFDPKALPTITGINYRDVIAKNVAYPAKLEGIANDPFTGICISNANIEKVGKKLA--W 361
Query: 411 KCSDVSGSAYQVKPWPCSELSS 432
C+DV G V P PC+ L
Sbjct: 362 NCTDVHGVTSNVSPEPCALLQE 383
>gi|356574519|ref|XP_003555394.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like,
partial [Glycine max]
Length = 305
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 125/281 (44%), Positives = 172/281 (61%), Gaps = 3/281 (1%)
Query: 161 WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA 220
WW+ + ++ TRP +IE M S I ISN+ NSP W +HP+Y SN+ I+ +TILAP
Sbjct: 2 WWDKFDKKQSNLTRPYMIEIMFSDQIQISNLTLVNSPSWFVHPIYSSNITIKGLTILAPV 61
Query: 221 DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP 280
DSPNTDGIDPDS +N IED YI +GDD VAVKSGWDEYGI +G P+ + IRR+T SP
Sbjct: 62 DSPNTDGIDPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGKPTQHLVIRRLTCISP 121
Query: 281 FSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGG--FIRNITVSDVYMENAR 337
S IA+GSE SGG+++V E I + + +KT +GRG ++++I V + + +
Sbjct: 122 DSAVIALGSEMSGGIQDVRVEDIIAISTQSTVRIKTAVGRGAMXYVKDIFVKGMSLSTMK 181
Query: 338 KGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNI 397
+ G G HPD F+P ALP + GI +DV T V S ++G+ N+PFTGIC+SN+
Sbjct: 182 YVFWMTGSYGSHPDAGFDPKALPNITGINYRDVVATNVTYSAKLEGISNAPFTGICISNV 241
Query: 398 NLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGA 438
++Q C+DV+G V P C L + G
Sbjct: 242 SIQVSEQRKKLQWNCTDVAGVTSNVSPNSCQLLPEKGKLGC 282
>gi|255641025|gb|ACU20792.1| unknown [Glycine max]
Length = 243
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 115/193 (59%), Positives = 136/193 (70%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R S+TDFGGVGDGKT NTKAF+ AI + GG LYVP G +LTGSF+L SH
Sbjct: 51 RTHSASLTDFGGVGDGKTSNTKAFQSAISHLSQYASKGGAQLYVPAGKWLTGSFSLISHF 110
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TLYL K AV+ A+QD WP I PLPSYGRGR+ P GRY S I G L DV++TG NGTI
Sbjct: 111 TLYLNKDAVLLASQDISEWPAIEPLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGGNGTI 170
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQGA WW + ++ L +TRP LIE M S I ISN+ NSP WN+HPVY SN++I+ +
Sbjct: 171 DGQGAFWWQKFHKKKLKYTRPYLIELMFSDQIQISNLTLLNSPSWNLHPVYSSNIIIKGL 230
Query: 215 TILAPADSPNTDG 227
TI+AP SPNTDG
Sbjct: 231 TIIAPVPSPNTDG 243
>gi|323453807|gb|EGB09678.1| hypothetical protein AURANDRAFT_2438, partial [Aureococcus
anophagefferens]
Length = 295
Score = 231 bits (590), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 134/295 (45%), Positives = 177/295 (60%), Gaps = 9/295 (3%)
Query: 36 NDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVY-LTGSFNLTSHM 94
+ IS+ +G DG T +T AF A+ T + VPPG L NLTSH
Sbjct: 6 KETISVASYGARCDGATEDTAAFEAALAHAG---AHAHTTILVPPGARCLIAPINLTSHT 62
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGT- 153
TL +A A + D WPLI PSYG+GR+ PG RY S +HG+ ++DV I GE T
Sbjct: 63 TLRIAANATVAGVADAARWPLIPGAPSYGQGRDHPGPRYTSLVHGEHVEDVTIQGEGPTS 122
Query: 154 -IDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIR 212
+DG G WW+ + ++ TR +LIEFM S+ I I ++ ++SPFWN H V +R
Sbjct: 123 VLDGNGQYWWD--QVHSMTVTRGHLIEFMYSKDIRIYDLSMRDSPFWNNHFYDSERVHVR 180
Query: 213 YVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITI 272
V I A +SPNTDG DPDS+ +V +E S GDD VA+KSGWD +G+AYG PS ITI
Sbjct: 181 NVHISAKDNSPNTDGWDPDSARDVLVEHSTYVGGDDCVAIKSGWDCFGVAYGKPSRNITI 240
Query: 273 RRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGI-HVKTNIGRGGFIRNI 326
R V + +GIA+GSE SGGVE+VL + +N+ GI HVKT RGG++RN+
Sbjct: 241 RDVNCTGSKAGIAIGSEMSGGVEDVLVQRVNILGKANGIAHVKTGPTRGGYVRNV 295
>gi|442804408|ref|YP_007372557.1| polygalacturonase Pgl [Clostridium stercorarium subsp. stercorarium
DSM 8532]
gi|442740258|gb|AGC67947.1| polygalacturonase Pgl [Clostridium stercorarium subsp. stercorarium
DSM 8532]
Length = 430
Score = 231 bits (589), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 146/385 (37%), Positives = 209/385 (54%), Gaps = 26/385 (6%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
+ITDFG V DGKTL T+AF++A+ + + +GG +YVP G +LTG +L S+ L++
Sbjct: 8 NITDFGAVPDGKTLCTEAFKKAVKKCEE---AGGGTIYVPAGKFLTGPIHLVSNTNLHID 64
Query: 100 KGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGA 159
GAV+ +Q+ ++PL+ Y R Y I+GD +++V ITG +GT+DGQG
Sbjct: 65 AGAVLLFSQNIEDYPLV-----YSRWEGEEAEVYSPLIYGDKVENVSITG-HGTLDGQGE 118
Query: 160 IWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP 219
WW + R++ L + RP I F S ++I + NSP W I+PV C+NVVI +TI P
Sbjct: 119 PWWRLQREKQLKYPRPRFICFQESERVLIQGIKIINSPAWTINPVRCNNVVIDGITIKNP 178
Query: 220 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS 279
ADSPNTDGI+PDS NV I + YIS GDD VA+KSG EY Y P ITI T
Sbjct: 179 ADSPNTDGINPDSCRNVRITNCYISVGDDCVAIKSGV-EYS-KYRIPCENITITNCTMLD 236
Query: 280 PFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG 339
G+ +GSE SG V N+ + GI +KT GRGG + +I VS++ M+
Sbjct: 237 GHGGVVIGSEMSGCVRNITISNCVFEGTDRGIRIKTRRGRGGVVEDIRVSNIIMKKVMCP 296
Query: 340 IKI-----AGDVGDHP--DDKFNPNAL----PVVNGITIKDVWGTKV-QQSGLIQGLKNS 387
+ + G G P DK NP+ + PV + + ++ + +G GL
Sbjct: 297 LVMNMYYFCGKGGKEPIVKDK-NPHPVNEGTPVFRRVHLSNISAREAGACAGFFYGLPEM 355
Query: 388 PFTGICLSN--INLQGVAGPTSPPL 410
P I + I++ A P P +
Sbjct: 356 PIEDISFHDVYIHMADDAKPDRPAM 380
>gi|71535025|gb|AAZ32910.1| polygalacturonase-like protein [Medicago sativa]
Length = 206
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 115/201 (57%), Positives = 144/201 (71%)
Query: 32 MRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLT 91
+ R +S+ DFGGVGDGKT NTKAF+ AI + GG+ LYVP G +LTGSF+L
Sbjct: 4 LNCRAHSVSLKDFGGVGDGKTSNTKAFKSAISHLSQNASEGGSQLYVPAGKWLTGSFSLI 63
Query: 92 SHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGEN 151
SH TLYL K AV+ A+QD WP+I PLPSYGRGR+ GR+ S I G L DV++TG+N
Sbjct: 64 SHFTLYLHKDAVLLASQDINEWPVIKPLPSYGRGRDAAAGRHTSLIFGTNLTDVIVTGDN 123
Query: 152 GTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVI 211
GTIDGQG+ WW + + L +TRP LIE M S +I ISN+ +SP WNIHPVY SN++I
Sbjct: 124 GTIDGQGSFWWQQFHNKKLKYTRPYLIELMFSDNIQISNLTLLDSPSWNIHPVYSSNIII 183
Query: 212 RYVTILAPADSPNTDGIDPDS 232
+ +TI+AP SPNTDGI+PDS
Sbjct: 184 KGITIIAPIRSPNTDGINPDS 204
>gi|297600007|ref|NP_001048308.2| Os02g0781000 [Oryza sativa Japonica Group]
gi|255671294|dbj|BAF10222.2| Os02g0781000, partial [Oryza sativa Japonica Group]
Length = 285
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/268 (42%), Positives = 163/268 (60%), Gaps = 4/268 (1%)
Query: 173 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS-PNTDGIDPD 231
TRP L++ M S+ II++N+ +NSPFW+ HP C+N+ + VTILAP S PNTDGIDPD
Sbjct: 1 TRPPLLQLMWSKDIIVANITLKNSPFWHFHPYDCTNITVSNVTILAPISSAPNTDGIDPD 60
Query: 232 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSET 290
S +V IE+ YIS GDD +AVKSGWD+YGIAYG PS I IR V S S GI++GSE
Sbjct: 61 SCQDVLIENCYISVGDDAIAVKSGWDQYGIAYGRPSRNIVIRNVMARSLVSAGISIGSEM 120
Query: 291 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 350
SGG+ NV E + ++ G+ +KT IGRGG+IR+I+ ++ +N R GI I D +H
Sbjct: 121 SGGIANVTVEDVRIWESRRGLRIKTAIGRGGYIRDISYRNITFDNVRAGIVIKVDYNEHA 180
Query: 351 DDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPL 410
DD ++ +A P + I+ K++ G V+ G + P I ++++ G++
Sbjct: 181 DDGYDRDAFPDITNISFKEIHGRGVRVPVRAHGSSDIPIKDISFQDMSI-GISYKKKHIF 239
Query: 411 KCSDVSGSAY-QVKPWPCSELSSSQQTG 437
+CS + G V P PC L + G
Sbjct: 240 QCSFIEGRVIGSVFPKPCENLDLYNEQG 267
>gi|403744854|ref|ZP_10953930.1| glycoside hydrolase family 28 [Alicyclobacillus hesperidum
URH17-3-68]
gi|403121782|gb|EJY56052.1| glycoside hydrolase family 28 [Alicyclobacillus hesperidum
URH17-3-68]
Length = 865
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 145/406 (35%), Positives = 203/406 (50%), Gaps = 45/406 (11%)
Query: 29 IVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSF 88
+V + +++ FG +GDGK+ +T+A + AI + GGTL YVP G Y T
Sbjct: 122 VVKTLAQGKMVNVKQFGAIGDGKSDDTRALQRAIDAVP----KGGTL-YVPAGTYYTAPL 176
Query: 89 NLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVIT 148
L S MTLYLAKGA + + N P+ S G E RYMS I GD +++V IT
Sbjct: 177 QLKSDMTLYLAKGATLLGSS---NIDAYKPIWSRWEGTEMY--RYMSLITGDNVRNVTIT 231
Query: 149 GENGTIDGQGAI------------WWNMWRQ-----------------RTLPFTRPNLIE 179
GE G IDG G WW+ + + LP+ RP+LIE
Sbjct: 232 GE-GVIDGNGETPIHDNAGNTYGNWWSKQYKEPLSDPAVSLVQSPNYSQGLPYARPSLIE 290
Query: 180 FMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIE 239
F++S++I+I V QNSP W IHPVYC +V + V I+ P S NTDG+DPDS + + I
Sbjct: 291 FLHSQNILIQGVTVQNSPSWTIHPVYCDHVTLADVHIVNPPTSDNTDGVDPDSVNGMQII 350
Query: 240 DSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLA 299
D S GDD +A+KSG D G G PS I +R + G+++GSE SGGV+NVL
Sbjct: 351 DDTFSVGDDDIAIKSGKDAEGRRIGIPSQNIVVRNCHMLNGH-GVSIGSEMSGGVQNVLV 409
Query: 300 EHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNP--- 356
E+ + G+ +KT GRGG ++NIT V M N + I + P
Sbjct: 410 ENCDFDGTNAGLRIKTLRGRGGIVQNITFDHVSMSNIQAQAFIIDENYASNGSALPPGPV 469
Query: 357 -NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 401
+A P + + ++ +Q+ GL P I N+ + G
Sbjct: 470 TDATPAIRNLNFDNITVNGAKQAMYFSGLAELPIQNIAFHNVAING 515
>gi|146295422|ref|YP_001179193.1| galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145408998|gb|ABP66002.1| Galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 447
Score = 217 bits (553), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 131/382 (34%), Positives = 198/382 (51%), Gaps = 30/382 (7%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+++ DFG VG+G+ +T+AF++AI + GG +YVP GVYLTG +L S++TLY+
Sbjct: 3 LNVRDFGAVGNGQVKDTEAFKKAI---EASWEQGGGTVYVPAGVYLTGPIHLKSNITLYI 59
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
GA +K + D ++PL+ Y R Y I+ + +++ + G GTIDGQG
Sbjct: 60 ESGATLKFSNDLDDFPLV-----YTRWEGEEQEAYSPLIYAENAENIAVVG-FGTIDGQG 113
Query: 159 AIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILA 218
+WW + R + L + RP + F +++ I + NSP W ++P+ C NV + V I
Sbjct: 114 EMWWKLHRNKELKYPRPRTVCFYRCKNVTIEGIKIVNSPSWTVNPIECENVTVHNVKIQN 173
Query: 219 PADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGS 278
P DSPNTDGI+P+S V I + YI GDD V +KSG ++ + P I I +
Sbjct: 174 PYDSPNTDGINPESCEGVRISNCYIDVGDDCVTLKSGTEDCKVRI--PCENIAITNCIMA 231
Query: 279 SPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN--- 335
GI +GSE SGGV NV+ + GI +KT GRGG + +I VS++ M+N
Sbjct: 232 HGHGGIVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGIVEDIRVSNIVMKNVIC 291
Query: 336 ---------ARKG--IKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQ-QSGLIQG 383
KG K D +P D + P+V I I DV + + +G + G
Sbjct: 292 PFAFYMYYHCGKGGKEKRVWDKSPYPVD----STTPIVRRIYISDVIVRQARAAAGFLYG 347
Query: 384 LKNSPFTGICLSNINLQGVAGP 405
L P + SN+ ++ P
Sbjct: 348 LTEMPIEDVVFSNVTVEMAQNP 369
>gi|312136085|ref|YP_004003423.1| glycoside hydrolase family 28 [Caldicellulosiruptor owensensis OL]
gi|311776136|gb|ADQ05623.1| glycoside hydrolase family 28 [Caldicellulosiruptor owensensis OL]
Length = 447
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 132/382 (34%), Positives = 196/382 (51%), Gaps = 30/382 (7%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+++ +FG G+G +T+AF++AI + + GG ++VP G+Y TG +L S+MTLY+
Sbjct: 3 VNVREFGAKGNGIDKDTEAFKKAI---EECEKQGGGTIFVPAGIYHTGPIHLKSNMTLYI 59
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
GAV+K +QD ++PL+ Y R Y I+ + ++V + G GTIDGQG
Sbjct: 60 ENGAVLKFSQDIEDYPLV-----YTRWEGEEMQVYSPLIYAENAENVAVVG-FGTIDGQG 113
Query: 159 AIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILA 218
WW + R + L + RP I F ++ I + NSP W ++P+ C NV + V I
Sbjct: 114 EKWWRLHRNKELKYPRPRSICFYRCNNVTIEGIKIVNSPSWTVNPIECQNVTVHNVKIQN 173
Query: 219 PADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGS 278
P DSPNTDGI+P+S V I + YI GDD V +KSG ++ P ITI +
Sbjct: 174 PYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKQKIPCENITITNCIMA 231
Query: 279 SPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR- 337
G+ +GSE SGGV NV+ + GI +KT GRGG + +I VS++ M+N
Sbjct: 232 HGHGGVVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMC 291
Query: 338 -----------KGIKIAG--DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQ-QSGLIQG 383
KG K D +P D + PVV I I DV + + +G + G
Sbjct: 292 PFAFYMYYHCGKGGKEKKVWDKSPYPVD----STTPVVRRIYISDVVVREARAAAGFLYG 347
Query: 384 LKNSPFTGICLSNINLQGVAGP 405
L P + SN+ ++ P
Sbjct: 348 LTEMPIEDVVFSNVTVEMAQNP 369
>gi|312126393|ref|YP_003991267.1| glycoside hydrolase family 28 [Caldicellulosiruptor hydrothermalis
108]
gi|311776412|gb|ADQ05898.1| glycoside hydrolase family 28 [Caldicellulosiruptor hydrothermalis
108]
Length = 447
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 132/387 (34%), Positives = 199/387 (51%), Gaps = 31/387 (8%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+++ +FG G+G +T+AF++AI + + GG ++VP G+Y G+ +L S+MTLY+
Sbjct: 3 VNVREFGAKGNGIDKDTEAFKKAI---EECEKQGGGTIFVPAGIYHIGAIHLKSNMTLYI 59
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
GAV+K +QD ++PL+ Y R Y I+ + ++V + G GTIDGQG
Sbjct: 60 ESGAVLKFSQDEEDYPLV-----YTRWEGEEMQVYSPLIYAENAENVAVVG-FGTIDGQG 113
Query: 159 AIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILA 218
WW + R + L + RP I F ++ I + NSP W ++P+ C NV + V I
Sbjct: 114 EKWWRLHRNKELKYPRPRSICFYRCNNVTIEGIKIVNSPSWTVNPIECQNVTVHNVKIQN 173
Query: 219 PADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGS 278
P DSPNTDGI+P+S V I + YI GDD V +KSG ++ P ITI +
Sbjct: 174 PYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKQKIPCENITITNCIMA 231
Query: 279 SPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR- 337
G+ +GSE SGGV NV+ + GI +KT GRGG + +I VS++ M+N
Sbjct: 232 HGHGGVVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMC 291
Query: 338 -----------KG--IKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQ-QSGLIQG 383
KG K D +P D+ + P+V I I DV + + +G + G
Sbjct: 292 PFAFYMYYHCGKGGKEKRVWDKSPYPVDE----STPIVRRIYISDVVVREARAAAGFLYG 347
Query: 384 LKNSPFTGICLSNINLQGVAGPTSPPL 410
L P + SN+ ++ P P L
Sbjct: 348 LTEMPIEDVVFSNVTVEMAQNP-EPEL 373
>gi|312621274|ref|YP_004022887.1| glycoside hydrolase family 28 [Caldicellulosiruptor kronotskyensis
2002]
gi|312201741|gb|ADQ45068.1| glycoside hydrolase family 28 [Caldicellulosiruptor kronotskyensis
2002]
Length = 447
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 133/386 (34%), Positives = 199/386 (51%), Gaps = 31/386 (8%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
++ DFG G+G +T+AF++AI + ++GG +YVP G+Y G+ +L S+MTLY+
Sbjct: 4 NVCDFGAKGNGVDKDTEAFKKAI---EVCEKNGGGTVYVPAGIYHVGALHLKSNMTLYIE 60
Query: 100 KGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGA 159
GAV+K +QD ++PL+ Y R Y I+ + ++V + G GTIDGQG
Sbjct: 61 SGAVLKFSQDEEDYPLV-----YTRWEGEEMQVYSPLIYAEDAENVAVVG-FGTIDGQGE 114
Query: 160 IWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP 219
WW + R + L + RP I F ++ I + NSP W ++P+ C NV + + I P
Sbjct: 115 KWWRLHRNKELKYPRPRSICFYRCNNVTIEGIKIINSPSWTVNPIECQNVTVHNIKIQNP 174
Query: 220 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS 279
DSPNTDGI+P+S V I + YI GDD V +KSG ++ P ITI +
Sbjct: 175 YDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKERIPCENITITNCIMAH 232
Query: 280 PFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR-- 337
G+ +GSE SGGV NV+ + GI +KT GRGG + +I VS++ M+N
Sbjct: 233 GHGGVVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMCP 292
Query: 338 ----------KG--IKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQ-QSGLIQGL 384
KG K D +P D+ + P+V I I DV + + +G + GL
Sbjct: 293 FAFYMYYHCGKGGKEKRVWDKSPYPVDE----STPIVRRIYISDVVVREARAAAGFLYGL 348
Query: 385 KNSPFTGICLSNINLQGVAGPTSPPL 410
P + SN+ ++ P P L
Sbjct: 349 TEMPIEDVVFSNVTVEMAQNP-EPEL 373
>gi|312794141|ref|YP_004027064.1| glycoside hydrolase family 28 [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312181281|gb|ADQ41451.1| glycoside hydrolase family 28 [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 447
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 130/382 (34%), Positives = 196/382 (51%), Gaps = 30/382 (7%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+++ +FG G+G +T+AF++AI + + GG ++VP G+Y G+ +L S+MTLY+
Sbjct: 3 VNVREFGAKGNGIDKDTEAFKKAI---EECEKQGGGTIFVPAGIYHIGAIHLKSNMTLYI 59
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
GAV+K +QD ++PL+ Y R Y I+ + ++V + G GTIDGQG
Sbjct: 60 ESGAVLKFSQDEEDYPLV-----YTRWEGEEMQVYSPLIYAENAENVAVVG-FGTIDGQG 113
Query: 159 AIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILA 218
WW + R + L + RP I F ++ I + NSP W ++P+ C NV + V I
Sbjct: 114 EKWWRLHRNKELKYPRPRSICFYKCNNVTIEGIKIINSPSWTVNPIECQNVTVHNVKIQN 173
Query: 219 PADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGS 278
P DSPNTDGI+P+S V I + YI GDD V +KSG ++ P ITI +
Sbjct: 174 PYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKQKIPCENITITNCIMA 231
Query: 279 SPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR- 337
G+ +GSE SGGV NV+ + GI +KT GRGG + +I VS++ M+N
Sbjct: 232 HGHGGVVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMC 291
Query: 338 -----------KG--IKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQ-QSGLIQG 383
KG K D +P D + P+V I I DV + + +G + G
Sbjct: 292 PFAFYMYYHCGKGGKEKRVWDKSPYPVD----STTPIVRRIYISDVVVREARAAAGFLYG 347
Query: 384 LKNSPFTGICLSNINLQGVAGP 405
L P + SN+ ++ P
Sbjct: 348 LTEMPIEDVVFSNVTVEMAQNP 369
>gi|302872741|ref|YP_003841377.1| polygalacturonase [Caldicellulosiruptor obsidiansis OB47]
gi|302575600|gb|ADL43391.1| Polygalacturonase [Caldicellulosiruptor obsidiansis OB47]
Length = 447
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 132/382 (34%), Positives = 195/382 (51%), Gaps = 30/382 (7%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+++ +FG G+G +T+AF+ AI + + GG ++VP G+Y TG +L S+MTLY+
Sbjct: 3 VNVVEFGAKGNGIDKDTEAFKRAI---EACEKHGGGTIFVPAGIYHTGPIHLKSNMTLYI 59
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
GAV+K +QD ++PL+ Y R Y I+ + ++V + G GTIDGQG
Sbjct: 60 ENGAVLKFSQDIEDYPLV-----YTRWEGEEMQVYSPLIYAENAENVAVVG-FGTIDGQG 113
Query: 159 AIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILA 218
WW + R + L + RP I F ++ I + NSP W ++P+ C NV + V I
Sbjct: 114 EKWWRLHRDKELKYPRPRSICFYRCNNVTIEGIKIVNSPSWTVNPIECQNVTVHNVKIQN 173
Query: 219 PADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGS 278
P DSPNTDGI+P+S V I + YI GDD V +KSG ++ P ITI +
Sbjct: 174 PYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKERIPCENITITNCIMA 231
Query: 279 SPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR- 337
G+ +GSE SGGV NV+ + GI +KT GRGG + +I VS++ M+N
Sbjct: 232 HGHGGVVIGSEMSGGVRNVVISNCVFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMC 291
Query: 338 -----------KG--IKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQ-QSGLIQG 383
KG K D +P D + PVV I I DV + + +G + G
Sbjct: 292 PFAFYMYYHCGKGGKEKKVWDKSPYPVD----STTPVVRRIYISDVVVREARAAAGFLYG 347
Query: 384 LKNSPFTGICLSNINLQGVAGP 405
L P + SN+ ++ P
Sbjct: 348 LTEMPIEDVVFSNVTVEMAQNP 369
>gi|413941560|gb|AFW74209.1| hypothetical protein ZEAMMB73_002485 [Zea mays]
gi|413941561|gb|AFW74210.1| hypothetical protein ZEAMMB73_002485 [Zea mays]
Length = 280
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 106/180 (58%), Positives = 129/180 (71%), Gaps = 1/180 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTL-LYVPPGVYLTGSFNLTSH 93
R S+ +FG VGDG TLNT AFR A+ + GG L VPPG +LTGSFNLTS
Sbjct: 84 REVWASVEEFGAVGDGATLNTAAFRRAVAELGARAVGGGGARLDVPPGRWLTGSFNLTSR 143
Query: 94 MTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGT 153
TL+L +GAVI +QD WPLI PLPSYGRGRER G R++S IHG+GL DVVITG NGT
Sbjct: 144 FTLFLHRGAVILGSQDPEEWPLITPLPSYGRGRERLGPRHISLIHGEGLNDVVITGSNGT 203
Query: 154 IDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRY 213
IDGQG +WW +WR RTL TR +LIE +NS +++IS+V NSPFW +HPVYC +V+ +
Sbjct: 204 IDGQGHMWWELWRNRTLNHTRGHLIELVNSTNVLISSVTLSNSPFWTVHPVYCRSVLASW 263
>gi|255641037|gb|ACU20798.1| unknown [Glycine max]
Length = 186
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 103/184 (55%), Positives = 137/184 (74%), Gaps = 1/184 (0%)
Query: 118 PLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNL 177
PLPSYGRG + P GRY S I+G L DVVITG+NG IDGQG++WW++ +L ++RP++
Sbjct: 3 PLPSYGRGIDVPVGRYRSLIYGQNLSDVVITGDNGIIDGQGSVWWDLISTHSLNYSRPHI 62
Query: 178 IEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVC 237
IE + S +IIISN+ F NSP W+IHPVYCSN+ I+ +T+ AP P T GI PDSS +VC
Sbjct: 63 IELVGSDNIIISNLTFLNSPAWSIHPVYCSNIQIQKITVQAPTKFPYTSGIVPDSSEHVC 122
Query: 238 IEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRV-TGSSPFSGIAVGSETSGGVEN 296
I++ ISTG D + +KSGWDEYG+AYG P+S + IR V SS +G+A GSE SGG+ +
Sbjct: 123 IDNCNISTGHDAIVLKSGWDEYGVAYGKPTSNVHIRGVYLQSSSGAGLAFGSEMSGGISD 182
Query: 297 VLAE 300
++AE
Sbjct: 183 IIAE 186
>gi|222530340|ref|YP_002574222.1| galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor bescii
DSM 6725]
gi|222457187|gb|ACM61449.1| Galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor bescii
DSM 6725]
Length = 447
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 133/386 (34%), Positives = 198/386 (51%), Gaps = 31/386 (8%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
++ +FG G+G +T+AF++AI + ++GG +YVP G+Y G+ +L S+MTLY+
Sbjct: 4 NVCNFGAKGNGVDKDTEAFKKAI---EVCEKNGGGTVYVPAGIYHIGALHLKSNMTLYIE 60
Query: 100 KGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGA 159
GAV+K +QD ++PL+ Y R Y I+ + ++V + G GTIDGQG
Sbjct: 61 SGAVLKFSQDEEDYPLV-----YTRWEGEEMQVYSPLIYAEDAENVAVVG-FGTIDGQGE 114
Query: 160 IWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP 219
WW + R + L + RP I F ++ I + NSP W ++P+ C NV + + I P
Sbjct: 115 KWWRLHRNKELKYPRPRSICFYRCNNVTIEGIKIINSPSWTVNPIECQNVTVHNIKIQNP 174
Query: 220 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS 279
DSPNTDGI+P+S V I + YI GDD V +KSG ++ P ITI +
Sbjct: 175 YDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKERIPCENITITNCIMAH 232
Query: 280 PFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR-- 337
G+ +GSE SGGV NV+ + GI +KT GRGG + +I VS++ M+N
Sbjct: 233 GHGGVVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMCP 292
Query: 338 ----------KG--IKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQ-QSGLIQGL 384
KG K D +P D + PVV I I DV + + +G + GL
Sbjct: 293 FAFYMYYHCGKGGKEKRVWDKSPYPVD----DTTPVVRRIYISDVVVRQARAAAGFLYGL 348
Query: 385 KNSPFTGICLSNINLQGVAGPTSPPL 410
P + SN+ ++ P P L
Sbjct: 349 TEMPIEDVVFSNVTVEMAQNP-EPEL 373
>gi|59044763|gb|AAW84064.1| pectate lyase [uncultured bacterium]
Length = 466
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 133/383 (34%), Positives = 192/383 (50%), Gaps = 24/383 (6%)
Query: 41 ITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAK 100
I FG DG+T +T A AI + +GG ++Y+P G +LTG L SH+ L+L
Sbjct: 10 IRTFGAQPDGETPSTAAITAAI---ETCAAAGGGVVYIPAGRFLTGPLRLKSHVRLHLEA 66
Query: 101 GAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAI 160
GA + +QD ++P+ L + G+E Y I+G+ L+ V ITG GTIDG+G
Sbjct: 67 GAHLLFSQDPADYPV---LETRWEGKEVLT--YAHQIYGEDLEGVAITG-RGTIDGRGET 120
Query: 161 WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA 220
WW ++R + RP LI F + I+I V NSP W I+PV C V I VTI+ P
Sbjct: 121 WWRLFRAKAFTHPRPRLIAFTRCKDILIEGVTLVNSPAWTINPVMCERVTIDKVTIINPP 180
Query: 221 DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP 280
DSPNTDGIDPDSS NV I + YI GDD +A+K+G ++ Y P I I
Sbjct: 181 DSPNTDGIDPDSSRNVYITNCYIDVGDDCIAIKAGREDS--LYRTPCENIVIANCLMRHG 238
Query: 281 FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 340
G+ +GSETSGG+ V+ + + GI +K+ GRGGF+ ++ +++ ME
Sbjct: 239 HGGVVIGSETSGGIRKVVITNCIFEDTDRGIRLKSRRGRGGFVEDLRATNIIMEKVLCPF 298
Query: 341 KI------AGDVGDHPDDKFNPN----ALPVVNGITIKDVWGTKVQ-QSGLIQGLKNSPF 389
+ G V D P+ A P ++ + +VQ + + GL P
Sbjct: 299 VLNMYYDTGGGVIDERAHDLEPHPVSEATPSFRRLSFSHITAREVQAAAAFLYGLPEQPL 358
Query: 390 TGICLSN--INLQGVAGPTSPPL 410
+ + I L A P P +
Sbjct: 359 EDVLFDDIWIELAADASPARPAM 381
>gi|344995379|ref|YP_004797722.1| glycoside hydrolase family protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343963598|gb|AEM72745.1| glycoside hydrolase family 28 [Caldicellulosiruptor lactoaceticus
6A]
Length = 447
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 130/382 (34%), Positives = 195/382 (51%), Gaps = 30/382 (7%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+++ +FG G+G T+AF++AI + + GG ++VP G+Y G+ +L S+MTLY+
Sbjct: 3 VNVREFGAKGNGIDKVTEAFKKAI---EECEKQGGGTIFVPAGIYHIGAIHLKSNMTLYI 59
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
GAV+K +QD ++PL+ Y R Y I+ + ++V + G GTIDGQG
Sbjct: 60 ESGAVLKFSQDEEDYPLV-----YTRWEGEEMQVYSPLIYAENAENVAVVG-FGTIDGQG 113
Query: 159 AIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILA 218
WW + R + L + RP I F ++ I + NSP W ++P+ C NV + V I
Sbjct: 114 EKWWRLHRNKELKYPRPRSICFYKCNNVTIEGIKIINSPSWTVNPIECQNVTVHNVKIQN 173
Query: 219 PADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGS 278
P DSPNTDGI+P+S V I + YI GDD V +KSG ++ P ITI +
Sbjct: 174 PYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKQKIPCENITITNCIMA 231
Query: 279 SPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR- 337
G+ +GSE SGGV NV+ + GI +KT GRGG + +I VS++ M+N
Sbjct: 232 HGHGGVVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMC 291
Query: 338 -----------KG--IKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQ-QSGLIQG 383
KG K D +P D + P+V I I DV + + +G + G
Sbjct: 292 PFAFYMYYHCGKGGKEKRVWDKSPYPVD----DTTPIVRRIYISDVVVREARAAAGFLYG 347
Query: 384 LKNSPFTGICLSNINLQGVAGP 405
L P + SN+ ++ P
Sbjct: 348 LTEMPIEDVVFSNVTVEMAQNP 369
>gi|317474355|ref|ZP_07933629.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
gi|316909036|gb|EFV30716.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
Length = 477
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 141/393 (35%), Positives = 204/393 (51%), Gaps = 35/393 (8%)
Query: 30 VPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFN 89
+P+ ++ D+G +G+ TL T+AF++AI R GG ++ VP G Y++G
Sbjct: 1 MPLMMLGQYFNVNDYGAIGN-HTLCTEAFQKAIDTASD--RGGGKVI-VPAGDYVSGPLF 56
Query: 90 LTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITG 149
L S++ + GA I + D N P+I G ER Y S G L++V ITG
Sbjct: 57 LRSNIEFEVCSGATIYFSNDIANTPIIN---GSWEGIERK--VYASLFTGHDLKNVTITG 111
Query: 150 ENGTIDGQGAIWWNMW------------RQRT--------LPFTRPNLIEFMNSRSIIIS 189
G IDGQG WW+ + R+R L + RP +I ++ I+
Sbjct: 112 R-GRIDGQGKAWWDAFWETDKMRTAAGIREREPENPEGSPLKYPRPRMINLYRCENVKIA 170
Query: 190 NVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDL 249
++ NSP W +HPVYC NV+I ++I+ P +SPNTDGIDPD + V I + YI GDD
Sbjct: 171 DLTITNSPSWTVHPVYCRNVIIDGISIIQPYESPNTDGIDPDCCNGVRISNCYIDCGDDC 230
Query: 250 VAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGV 309
+ +KSG++E+G G P I I T + S + +GSE SGG++NV +
Sbjct: 231 ITLKSGYNEHGRKKGIPCENIVISNCTFAHGRSAVGIGSEMSGGIKNVTVMNCVFKGTLR 290
Query: 310 GIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVG-DHPDDKFNP--NALPVVNGIT 366
G+ VKT GRGG + NI S + MEN R+GI I D+G + K P + P I
Sbjct: 291 GLRVKTGRGRGGTVENIFASGIIMENLREGISI--DMGYEGVSGKIYPVTESTPFFKNIR 348
Query: 367 IKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL 399
KD+ GT V+Q+ I GL +P I L +I +
Sbjct: 349 FKDIIGTNVEQAINIIGLAEAPPQFIVLEDIRM 381
>gi|47497401|dbj|BAD19438.1| putative polygalacturonase [Oryza sativa Japonica Group]
Length = 277
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 111/260 (42%), Positives = 157/260 (60%), Gaps = 4/260 (1%)
Query: 181 MNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS-PNTDGIDPDSSSNVCIE 239
M S+ II++N+ +NSPFW+ HP C+N+ + VTILAP S PNTDGIDPDS +V IE
Sbjct: 1 MWSKDIIVANITLKNSPFWHFHPYDCTNITVSNVTILAPISSAPNTDGIDPDSCQDVLIE 60
Query: 240 DSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVL 298
+ YIS GDD +AVKSGWD+YGIAYG PS I IR V S S GI++GSE SGG+ NV
Sbjct: 61 NCYISVGDDAIAVKSGWDQYGIAYGRPSRNIVIRNVMARSLVSAGISIGSEMSGGIANVT 120
Query: 299 AEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNA 358
E + ++ G+ +KT IGRGG+IR+I+ ++ +N R GI I D +H DD ++ +A
Sbjct: 121 VEDVRIWESRRGLRIKTAIGRGGYIRDISYRNITFDNVRAGIVIKVDYNEHADDGYDRDA 180
Query: 359 LPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGS 418
P + I+ K++ G V+ G + P I ++++ G++ +CS + G
Sbjct: 181 FPDITNISFKEIHGRGVRVPVRAHGSSDIPIKDISFQDMSI-GISYKKKHIFQCSFIEGR 239
Query: 419 AY-QVKPWPCSELSSSQQTG 437
V P PC L + G
Sbjct: 240 VIGSVFPKPCENLDLYNEQG 259
>gi|357452825|ref|XP_003596689.1| Exo-poly-alpha-D-galacturonosidase [Medicago truncatula]
gi|355485737|gb|AES66940.1| Exo-poly-alpha-D-galacturonosidase [Medicago truncatula]
Length = 238
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 115/234 (49%), Positives = 148/234 (63%), Gaps = 17/234 (7%)
Query: 11 LLSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRR 70
LL Y +++ S +C I R +SIT+FG VGD TLNTKAF+ AI+ ++
Sbjct: 16 LLVY--SWTVWSNSSCKLINIKEVRPHSVSITEFGAVGDWITLNTKAFQNAIFYLKLYAD 73
Query: 71 SGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPG 130
GG L+VP G + TGSF+L SH+TL L K AVI + + +WP++ P PSYGRGRE PG
Sbjct: 74 KGGAKLFVPAGRWFTGSFDLISHLTLLLDKDAVILGSTNPGDWPVVDPPPSYGRGRELPG 133
Query: 131 GRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISN 190
G + S I+G L DV+ITG NGTIDGQ +IWW IE MNS++++ISN
Sbjct: 134 GWHRSLIYGCNLTDVIITGNNGTIDGQRSIWW---------------IESMNSKNVLISN 178
Query: 191 VIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYIS 244
V F NSPFW +H VYCS+V ++ VTILAP PNTDGID S ++ YIS
Sbjct: 179 VTFLNSPFWTMHHVYCSHVTVQNVTILAPFGLPNTDGIDSYSLIMYALKTGYIS 232
>gi|344995681|ref|YP_004798024.1| glycoside hydrolase family protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343963900|gb|AEM73047.1| glycoside hydrolase family 28 [Caldicellulosiruptor lactoaceticus
6A]
Length = 443
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 130/387 (33%), Positives = 193/387 (49%), Gaps = 35/387 (9%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+++ +FG G+G +T+AF++AI + + GG ++VP G+Y G+ +L S+MTLY+
Sbjct: 3 VNVREFGAKGNGIDKDTEAFKKAI---EECEKQGGGTIFVPAGIYHIGAIHLKSNMTLYI 59
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
GAV+K +QD Y R Y I+ + ++V + G GTIDGQG
Sbjct: 60 ESGAVLKFSQDE---------EEYTRWEGEEMQVYSPLIYAENAENVAVVG-FGTIDGQG 109
Query: 159 AIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILA 218
WW + R + L + RP I F ++ I + NSP W ++P+ C NV + V I
Sbjct: 110 EKWWRLHRNKELKYPRPRSICFYKCNNVTIEGIKIINSPSWTVNPIECQNVTVHNVKIQN 169
Query: 219 PADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGS 278
P DSPNTDGI+P+S V I + YI GDD V +KSG ++ P ITI +
Sbjct: 170 PYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKQKIPCENITITNCIMA 227
Query: 279 SPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR- 337
G+ +GSE SGGV NV+ + GI +KT GRGG + +I VS++ M+N
Sbjct: 228 HGHGGVVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMC 287
Query: 338 -----------KG--IKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQ-QSGLIQG 383
KG K D +P D + P+V I I DV + + +G + G
Sbjct: 288 PFAFYMYYHCGKGGKEKRVWDKSPYPVD----DTTPIVRRIYISDVVVREARAAAGFLYG 343
Query: 384 LKNSPFTGICLSNINLQGVAGPTSPPL 410
L P + SN+ ++ P P L
Sbjct: 344 LTEMPIEDVVFSNVTVEMAQNP-EPEL 369
>gi|386346149|ref|YP_006044398.1| glycoside hydrolase family protein [Spirochaeta thermophila DSM
6578]
gi|339411116|gb|AEJ60681.1| glycoside hydrolase family 28 [Spirochaeta thermophila DSM 6578]
Length = 462
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 136/406 (33%), Positives = 191/406 (47%), Gaps = 57/406 (14%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+ +T G G +T AFREA+ RI+ +GG L+VPPG YL G L SH+ +
Sbjct: 3 VDVTTLGADPTGLRESTDAFREALSRIEG---AGGGRLHVPPGDYLVGPLRLCSHLEFEV 59
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
A+GA I+ QD +P++ + R Y I +G +D+ I+G G IDGQG
Sbjct: 60 ARGARIRFVQDPDRYPVV-----FTRWEGVECHAYAPMIFVEGAEDIRISG-GGVIDGQG 113
Query: 159 AIWWNMWRQ---------------------------------RTLPFTRPNLIEFMNSRS 185
WW M+R R F RP L++ +SR
Sbjct: 114 DAWWRMYRDYREGRVTRFPFSSVEEIARRNAHLSTKASGGGGRESHFLRPPLLQVKDSRR 173
Query: 186 IIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYIST 245
++I +I +NS FWN H +Y V IR V+ P D+PNTDG++ DSS NV IED
Sbjct: 174 VVIEGIILRNSAFWNTHILYSDEVWIRGVSFENPPDAPNTDGLNVDSSRNVRIEDCTFDV 233
Query: 246 GDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLY 305
GDD + +KSG DE G G P+ + IR GI GSE +GGV NV+
Sbjct: 234 GDDCLGLKSGIDEDGRRVGRPTEHVVIRGCIMRRGHGGIVCGSEIAGGVRNVVVTGCIFQ 293
Query: 306 NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG--IKIAGDVGDHPDDKFNPNAL---- 359
+ GI +K+ GRGGF+ N+ V + ME + + G P ++ + L
Sbjct: 294 DTDRGIRIKSRRGRGGFVENVMVHQIVMERVLVPLVVNLYYRCGIDPGEEETISRLASLL 353
Query: 360 --------PVVNGITIKDVWGTKVQQS-GLIQGLKNSPFTGICLSN 396
P V I+I V+ T V+ S G + GL P G+ LS+
Sbjct: 354 PLPVDETTPAVRNISISQVFATGVKSSAGFLLGLPERPIEGLMLSD 399
>gi|379727941|ref|YP_005320126.1| polygalacturonase [Melissococcus plutonius DAT561]
gi|376318844|dbj|BAL62631.1| polygalacturonase [Melissococcus plutonius DAT561]
Length = 442
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 134/375 (35%), Positives = 189/375 (50%), Gaps = 23/375 (6%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
IS+ DF + DG +L+TKAF AI + R GG + VPPG YLTG L S++ +
Sbjct: 6 ISLQDFSPIADGISLDTKAFEAAI---KVAERQGGGHIVVPPGTYLTGPIRLISNLVFEI 62
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
GA + T D +P + R YM I+G L +V++TG +GT+DGQG
Sbjct: 63 QAGATLLFTDDVEQFPTVD-----SRWEGVKSKAYMPCIYGKNLTNVILTG-SGTLDGQG 116
Query: 159 AIWWNMWRQ--RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTI 216
WW + R+ L + RP LI F S I IS++ SP W +HP+ C +V I+ ++I
Sbjct: 117 TNWWKLHRETPEKLAYPRPYLIGFDYSSRITISDLNLTMSPSWTVHPMECYDVTIQNISI 176
Query: 217 LAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVT 276
L PADSPNTDGIDP+S N+ I + I GDD +A+KSG ++ + ITI T
Sbjct: 177 LNPADSPNTDGIDPESCKNLRILNCNIDVGDDCIAIKSGTEQTTTSKS-ACENITISNCT 235
Query: 277 GSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENA 336
+ +GSE SG + NV + GI +KT GRGG + NITVS + ME+
Sbjct: 236 MVHGHGAVVLGSEMSGNIRNVTISNCVFQQTDRGIRMKTRRGRGGVVENITVSTIVMEDV 295
Query: 337 RKGIKIAGD--VGDHPDDKF----NP----NALPVVNGITIKDVWGTKVQ-QSGLIQGLK 385
I G +K+ NP P I ++ KV+ +G I GL
Sbjct: 296 LCPFVINAYYFCGPKGKEKYVWDKNPYPITKETPCFRSIHFSNIVAKKVRAAAGFIYGLP 355
Query: 386 NSPFTGICLSNINLQ 400
P + +NI ++
Sbjct: 356 EMPVQDVSFTNIQIE 370
>gi|307718144|ref|YP_003873676.1| hypothetical protein STHERM_c04310 [Spirochaeta thermophila DSM
6192]
gi|306531869|gb|ADN01403.1| hypothetical protein STHERM_c04310 [Spirochaeta thermophila DSM
6192]
Length = 462
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 138/410 (33%), Positives = 192/410 (46%), Gaps = 65/410 (15%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+ +T G G +T AFREA+ RI+ +GG L+VPPG YL G L SH+ +
Sbjct: 3 VDVTTLGADPTGLRESTDAFREALSRIEA---AGGGRLHVPPGDYLVGPLRLCSHLEFEV 59
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
A+GA I+ QD +P++ + R Y + +G +DV I+G G IDGQG
Sbjct: 60 ARGARIRFVQDPDRYPVV-----FTRWEGVECHAYAPMLFVEGAEDVRISG-GGVIDGQG 113
Query: 159 AIWWNMWRQ---------------------------------RTLPFTRPNLIEFMNSRS 185
A WW M+R R F RP L++ +SR
Sbjct: 114 ASWWRMYRDYREGRLTRFPFSSVEEIARRNAHLSTKASGGGGRESHFLRPPLLQVKDSRR 173
Query: 186 IIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYIST 245
++I ++ +NS FWN H +Y V IR V+ P D+PNTDG++ DSS NV IED
Sbjct: 174 VVIEGIVLRNSAFWNTHILYSDEVWIRGVSFENPPDAPNTDGLNVDSSRNVRIEDCTFDV 233
Query: 246 GDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLY 305
GDD + +KSG DE G G P+ + IR GI GSE +GGV NV+
Sbjct: 234 GDDCLGLKSGIDEDGRRVGRPTEHVVIRGCIMRRGHGGIVCGSEIAGGVRNVVVTGCIFQ 293
Query: 306 NVGVGIHVKTNIGRGGFIRNITVSDVYMENA----------RKGIKIAGDVGDHPDDKFN 355
+ GI +K+ GRGGF+ N+ + + ME R GI D G+
Sbjct: 294 DTDRGIRIKSRRGRGGFVENVMIHQIVMERVLVPLVVNLYYRCGI----DPGEEEIVSRL 349
Query: 356 PNALPV--------VNGITIKDVWGTKVQQS-GLIQGLKNSPFTGICLSN 396
+ LP+ V I+I V T V+ S G + GL P G+ LS+
Sbjct: 350 ASLLPLPVDETTPAVRNISISQVLATGVKSSAGFLLGLPERPIEGLVLSD 399
>gi|414864494|tpg|DAA43051.1| TPA: hypothetical protein ZEAMMB73_419161 [Zea mays]
Length = 220
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 96/173 (55%), Positives = 124/173 (71%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R +T++G VGDG+TLNT AF A+ + GG L VPPG +LTG FNLTS
Sbjct: 41 RKHVARVTEYGAVGDGRTLNTAAFARAVADLARRAPDGGAALVVPPGKWLTGPFNLTSCF 100
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TLYL +GA I A+QD +WPLIAPLPSYGRGR+ PG RY +FI G L DV+ITG+NGTI
Sbjct: 101 TLYLDEGAEILASQDMKHWPLIAPLPSYGRGRDEPGPRYSNFIGGSNLTDVIITGKNGTI 160
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCS 207
+GQG +WW+ + + L FTR +L+E + S +IIISNV F ++P+WN+HP YC+
Sbjct: 161 NGQGQVWWDKFHAKELKFTRGHLLELLYSDNIIISNVTFVDAPYWNLHPTYCT 213
>gi|196228361|ref|ZP_03127228.1| Exo-poly-alpha-galacturonosidase [Chthoniobacter flavus Ellin428]
gi|196227764|gb|EDY22267.1| Exo-poly-alpha-galacturonosidase [Chthoniobacter flavus Ellin428]
Length = 469
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 136/422 (32%), Positives = 204/422 (48%), Gaps = 62/422 (14%)
Query: 28 GIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGS 87
++P R +SI FGG GDGK LNT+AFR AI Q ++GG + VPPG + TG
Sbjct: 37 AVIPQR----SVSILQFGGKGDGKALNTEAFRAAI---QACAKAGGGRVVVPPGTFRTGP 89
Query: 88 FNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVI 147
L SH+ L + KGA+I+A+ ++ L PLP+ + + I G L D+ I
Sbjct: 90 IELASHVALIVEKGAIIQASDRFSDFGLPDPLPATQQEIDGYKKLLRPLISGTKLDDIAI 149
Query: 148 TGENGTIDGQGAIWWNMWR----------------------------------QRTLPFT 173
GE G IDG G+ WW ++ L
Sbjct: 150 AGE-GIIDGAGSGWWAKSDKAAERAAAAAKAGESASTKPADSTSPKSEKPAPPEKPLYVP 208
Query: 174 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 233
RP LI + + + V +NSP ++ P +C +VV+ VTI +PAD+PNTDGIDP +S
Sbjct: 209 RPFLITLRDCARVHLQGVTLRNSPMFHFVPHHCHDVVVEDVTIFSPADAPNTDGIDPANS 268
Query: 234 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITI---RRVTGSSPFSGIAVGSET 290
+V I I TGDD +AVK G G+A P+ +T+ + + G G+++GSET
Sbjct: 269 RDVLIRRCTIDTGDDNIAVKGG----GVA-NEPTENVTVTDCKFLHG----HGVSIGSET 319
Query: 291 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-----AGD 345
GV N L + N G + +K++ RGG + N+ D+ M+N I I
Sbjct: 320 EAGVRNFLVQRCAFENTGTALRIKSDRTRGGVVENVLYRDITMKNVETAITIFLFYDDKK 379
Query: 346 VGDHPDDKFNPNALPVVNGITIKDV--WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 403
HP+ P+V IT + + GT +++G + GL SP + + ++++ G A
Sbjct: 380 AAAHPELAPVTKQTPMVRNITFQKIVCHGT-TRKAGELVGLPESPISDVVFDDVHIDGAA 438
Query: 404 GP 405
P
Sbjct: 439 AP 440
>gi|332685997|ref|YP_004455771.1| polygalacturonase [Melissococcus plutonius ATCC 35311]
gi|332370006|dbj|BAK20962.1| polygalacturonase [Melissococcus plutonius ATCC 35311]
Length = 442
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 132/375 (35%), Positives = 188/375 (50%), Gaps = 23/375 (6%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
IS+ DF + DG +L+TKAF AI + R GG + PPG YLTG L S++ +
Sbjct: 6 ISLQDFSPIADGISLDTKAFEAAI---KVAERQGGGHIVAPPGTYLTGPIRLISNLVFEI 62
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
GA + T D +P++ R YM I+G L +V++TG +GT+DGQG
Sbjct: 63 QAGATLLFTDDVEQFPIVD-----SRLEGVKSKAYMPCIYGKNLTNVILTG-SGTLDGQG 116
Query: 159 AIWWNMWRQ--RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTI 216
WW + R+ L + RP LI F S I IS++ SP W +HP+ C +V I+ ++I
Sbjct: 117 TNWWKLHRETPEKLAYPRPYLIGFDYSSRITISDLNLTMSPSWTVHPMECYDVTIQNISI 176
Query: 217 LAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVT 276
L PADSPNTDGIDP+S N+ I + I GDD +A+KSG ++ + ITI T
Sbjct: 177 LNPADSPNTDGIDPESCKNLRILNCNIDVGDDCIAIKSGTEQTTTSKS-ACENITISNCT 235
Query: 277 GSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENA 336
+ +GSE S + NV + GI +KT GRGG + NITVS + ME+
Sbjct: 236 MVHGHGAVVLGSEMSRNIRNVTISNCVFQQTDRGIRMKTRRGRGGVVENITVSTIVMEDV 295
Query: 337 RKGIKIAGD--VGDHPDDKF----NP----NALPVVNGITIKDVWGTKVQQS-GLIQGLK 385
I G +K+ NP P I ++ KV+ + G I GL
Sbjct: 296 LCPFVINAYYFCGPKGKEKYVWDKNPYPITKETPCFRSIHFSNIVAKKVRAAEGFIYGLP 355
Query: 386 NSPFTGICLSNINLQ 400
P + +NI ++
Sbjct: 356 EMPVQDVSFTNIQIE 370
>gi|391227888|ref|ZP_10264095.1| endopolygalacturonase [Opitutaceae bacterium TAV1]
gi|391223381|gb|EIQ01801.1| endopolygalacturonase [Opitutaceae bacterium TAV1]
Length = 916
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 138/431 (32%), Positives = 205/431 (47%), Gaps = 58/431 (13%)
Query: 12 LSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRS 71
+S F F+L VP + ++ I D G G LNT+A EAI Q R
Sbjct: 1 MSVFTPFALP--------VPPVIPDRRVDIRDHGARPGGALLNTRAIAEAI---QACARQ 49
Query: 72 GGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGG 131
GG + VPPG++LTG+ + S + L+L GA ++ +Q+ ++ LP+ R GG
Sbjct: 50 GGGHVVVPPGIWLTGAIHFRSRIDLHLEAGAELRFSQNPDDY-----LPAVLSQR---GG 101
Query: 132 ----RYMSFIHGDGLQDVVITGENGTIDGQGAIWW----------------NMWRQRTLP 171
Y F++ +D+ ITG G ++GQG WW N RT P
Sbjct: 102 VMIYNYSPFLYAHRCEDISITGA-GLLNGQGQSWWPWKHSQPGMSSIQGPDNFAALRT-P 159
Query: 172 F-----------TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA 220
RP + + + ++I V F++SP W + PV+CS+++IR+ TIL P
Sbjct: 160 LEERVFGTREAGVRPVFCQPIECKRVLIEGVTFRDSPSWTLQPVWCSDLIIRHSTILNPP 219
Query: 221 D--SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGS 278
S NTDGIDPD+ NV IE + TGDD + +K+G DE G PS I IR
Sbjct: 220 SLFSHNTDGIDPDACRNVLIEHCVVDTGDDAICIKAGRDEDAWEAGIPSENILIRHCEIR 279
Query: 279 SPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK 338
S GI +GSE S GV N+ A I +KT GRGGFI++I + ++ R
Sbjct: 280 SGHGGITIGSEMSAGVRNLHAHDCTCDGTDTAIRIKTKPGRGGFIKDILIENITARRIRH 339
Query: 339 -GIKIA---GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICL 394
+++ GD + P D N +P V I I++V +++ ++GL P + L
Sbjct: 340 AAVELTFHYGDTLEKPPDPKNLKHVPAVENILIRNVRCDSAREALHLRGLPGHPLKNVTL 399
Query: 395 SNINLQGVAGP 405
N+ + P
Sbjct: 400 QNLEIHAFQNP 410
>gi|332299163|ref|YP_004441085.1| Polygalacturonase [Treponema brennaborense DSM 12168]
gi|332182266|gb|AEE17954.1| Polygalacturonase [Treponema brennaborense DSM 12168]
Length = 449
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 133/402 (33%), Positives = 201/402 (50%), Gaps = 53/402 (13%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
++++ +FG DG N AF EA+ L +GG L VP G++ TG L + MTL+
Sbjct: 3 ELNLKNFGAKADGIYNNAAAFAEAV---SVLHEAGGGTLTVPAGIWKTGPIRLCAKMTLH 59
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
LA+GAV++ D +P P Y R + ++ V +TG+ G IDG
Sbjct: 60 LAEGAVLRFIPDPELYP-----PVYTRWEGVECYAMQACLYCADSDSVTVTGK-GVIDGS 113
Query: 158 GAIWWNM-WRQ------------------------------RTLPFTRPNLIEFMNSRSI 186
G WW++ W++ R + F RP L++F N ++
Sbjct: 114 GDTWWDLRWQKADQGGPKSPIECKLAALNPGYRSQPGGGGGREVQFLRPALVQFYNCTNV 173
Query: 187 IISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTG 246
+ V +NSPFW +HPVYC N+++R +TI P D+PNTDGID DS +NV I D +S G
Sbjct: 174 RLEQVTLENSPFWTVHPVYCDNLLVRGITIQNPKDAPNTDGIDIDSCTNVQIVDCEVSVG 233
Query: 247 DDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYN 306
DD +A+KSG E GI P+ +T+R T G+ +GSET+ G+ +VLAE+
Sbjct: 234 DDGIALKSGSGEDGIRVNRPTRNVTVRGCTVRDAHGGMVIGSETAAGIRHVLAENCRFPG 293
Query: 307 VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-----AGDVGDHPDDKFNPNALPV 361
G+ +K+ GRGG I ++ + ++ ME+ I I G+ D F+ +A PV
Sbjct: 294 TDRGVRIKSRRGRGGEIYDVKLRNLVMEDNLCPIAINMYYKCGET-DPKSPLFSLDAQPV 352
Query: 362 VNGIT-IKDVWGTKVQQS------GLIQGLKNSPFTGICLSN 396
+ + DV T V+ S G I GL SP + + +
Sbjct: 353 TDSTPHVHDVEITGVRASGCKASAGFIAGLPESPVGNLVIKD 394
>gi|126009432|gb|ABM30197.2| polygalacturonase [Brassica juncea]
Length = 278
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 109/201 (54%), Positives = 137/201 (68%), Gaps = 1/201 (0%)
Query: 33 RYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTS 92
R R ++TDFG VGDG T+NT+AF A+Y I L + GG L VPPG +LT FNLTS
Sbjct: 77 RLRPVSFNLTDFGAVGDGVTVNTEAFERAVYAISKLSKKGGGQLNVPPGRWLTAPFNLTS 136
Query: 93 HMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENG 152
MTL+LA+ A I A QD WPL+ PLPSYG GRE G RY SFIHG L+DVV+TG NG
Sbjct: 137 FMTLFLAEDAEILAVQDETLWPLLPPLPSYGYGREHYGPRYGSFIHGQNLKDVVVTGNNG 196
Query: 153 TIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIR 212
+++GQG WW +R + L TR L++ M S + +N+ ++SPFW +HP C NV I
Sbjct: 197 SVNGQGVYWWKKYRSKLLNHTRGPLVQIMWSSDAVFANITLRDSPFWTLHPYDCKNVTIT 256
Query: 213 YVTILAPA-DSPNTDGIDPDS 232
+TILAP ++PNTDGIDPDS
Sbjct: 257 NMTILAPVFEAPNTDGIDPDS 277
>gi|379724921|ref|YP_005317052.1| hypothetical protein PM3016_7335 [Paenibacillus mucilaginosus 3016]
gi|378573593|gb|AFC33903.1| hypothetical protein PM3016_7335 [Paenibacillus mucilaginosus 3016]
Length = 506
Score = 200 bits (509), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 139/413 (33%), Positives = 194/413 (46%), Gaps = 55/413 (13%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
IT +G GDG NT A AI GG +YVP G Y+TG L SH+TL L
Sbjct: 5 DITSYGAQGDGLQDNTAAIAAAIEACS---AGGGGTVYVPAGDYVTGPIVLRSHITLQLE 61
Query: 100 KGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGA 159
G+V++ T +P P+ + G E G Y I+G+GL+ V I GE G I+GQG
Sbjct: 62 AGSVLRFTPRFDAYP---PVQTRWSGYEMWG--YSPLIYGNGLKQVAIKGE-GVIEGQGQ 115
Query: 160 IWWNMWR----------QRTLP-----------------------FTRPNLIEFMNSRSI 186
WW+ +R LP F RP L++ M+ +
Sbjct: 116 AWWDAYRVIRAGGAAPASEHLPKLVELNRVLTDTVKSNIVEWQTQFLRPPLLQLMHCEEV 175
Query: 187 IISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTG 246
++ + QNSPFWN H VYC +V +R V P+ +PN DG+D DS SNV I D + G
Sbjct: 176 VLEGITLQNSPFWNTHLVYCDDVSLRGVKFKNPSTTPNGDGLDVDSCSNVRISDCHFDVG 235
Query: 247 DDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYN 306
DD + +KSG DE G G P+ + + T G+ +GSET+GG+ NV +
Sbjct: 236 DDCLCLKSGIDEDGRRVGRPTENVAVTNCTMLHGHGGVVLGSETAGGIRNVTISNCIFIG 295
Query: 307 VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFN-----PNALPV 361
GI +KTN RGG + N+ +S++YME+ + I H D+ N P A+PV
Sbjct: 296 TDRGIRIKTNRARGGGVENVRISNIYMEDVLCPLAINA-FYKHGIDESNPLLTSPEAVPV 354
Query: 362 VNG------ITIKDVWGTKVQ-QSGLIQGLKNSPFTGICLSNINLQGVAGPTS 407
G I I DV + +G I GL P + L ++ + P
Sbjct: 355 TEGTPVIRHIQISDVTAKNARAAAGFIYGLPEMPIEDVALRHVTFEMTLDPAE 407
>gi|393201099|ref|YP_006462941.1| endopolygalacturonase [Solibacillus silvestris StLB046]
gi|327440430|dbj|BAK16795.1| endopolygalacturonase [Solibacillus silvestris StLB046]
Length = 449
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 132/371 (35%), Positives = 194/371 (52%), Gaps = 22/371 (5%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
+I FG VGDG NT A + A+ + + GG +YVP GV++TG+ + S+M L+L
Sbjct: 10 NIEQFGAVGDGWANNTSAIKRAV---EACSQGGGGTIYVPAGVFVTGAIEMKSNMHLHLE 66
Query: 100 KGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGA 159
G+ + + D ++P+I+ S G R YMS I+ +++ ITG GT++GQGA
Sbjct: 67 AGSELLFSNDRADYPVIS---SRWEGASR--DVYMSCIYACHAENIAITG-FGTLNGQGA 120
Query: 160 IWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP 219
WW ++++ +L + RPNL+ F + + I V +SP W +HP C NV I V+I+ P
Sbjct: 121 YWWKLFKEDSLAYPRPNLVSFDHCERVHIEQVKMIDSPSWTVHPNDCDNVTISGVSIVNP 180
Query: 220 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS 279
A+SPNTDGI+P+S NV I D I GDD +A+K+G ++ A P ITI T
Sbjct: 181 ANSPNTDGINPESCRNVKISDCSIDVGDDCIAIKAGTEDAERAI--PCENITITNCTMLH 238
Query: 280 PFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG 339
G+ GSE SG + NV+ + GI K+ GRGG I NI V+++ M N
Sbjct: 239 GHGGVVFGSEMSGDIRNVVVSNCIFEGTDRGIRFKSRRGRGGTIENIRVNNIVMNNVICP 298
Query: 340 IKI-----AGDVGDHP---DDKFNP-NAL-PVVNGITIKDVWGTKV-QQSGLIQGLKNSP 388
+ G G P D + P AL P I ++ T V +G + GL P
Sbjct: 299 FILNLYYYHGPRGMEPYVWDKEVQPVTALTPKFRHIHFSNITATDVTAAAGFMYGLPEMP 358
Query: 389 FTGICLSNINL 399
I S+I +
Sbjct: 359 VEDITFSHIRI 369
>gi|406667543|ref|ZP_11075299.1| Exo-poly-alpha-D-galacturonosidase precursor [Bacillus isronensis
B3W22]
gi|405384596|gb|EKB44039.1| Exo-poly-alpha-D-galacturonosidase precursor [Bacillus isronensis
B3W22]
Length = 448
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 136/392 (34%), Positives = 201/392 (51%), Gaps = 24/392 (6%)
Query: 32 MRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLT 91
M++ + +I FG VGDG NT A + A+ + + GG +YVP GV++TG+ L
Sbjct: 1 MQHSSAVYNIEQFGAVGDGWANNTSAIKRAV---EACSQGGGGTVYVPAGVFVTGAIELK 57
Query: 92 SHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGEN 151
S+M L+L G+ + + D ++P+I+ S G R YMS I+ +++ ITG
Sbjct: 58 SNMHLHLEAGSELLFSNDREDYPVIS---SRWEGASR--DVYMSCIYACHAKNIAITG-F 111
Query: 152 GTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVI 211
GT++GQGA WW ++++ L + RPNL+ F + + + V +SP W +HP C NV I
Sbjct: 112 GTLNGQGAYWWKLFKEDALAYPRPNLVSFDHCERVHVEQVKMIDSPSWTVHPNDCDNVTI 171
Query: 212 RYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGIT 271
V+I+ PA+SPNTDGI+P+S NV I D I GDD +A+KSG ++ P IT
Sbjct: 172 SAVSIVNPANSPNTDGINPESCRNVRISDCSIDVGDDCIAIKSGTEDAERVI--PCENIT 229
Query: 272 IRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDV 331
I T G+ GSE SG + NV+ + GI K+ GRGG I NI V+++
Sbjct: 230 ITNCTMLHGHGGVVFGSEMSGDIRNVVVSNCIFEGTDRGIRFKSRRGRGGTIENIRVNNI 289
Query: 332 YMENARKGIKI-----AGDVGDHP---DDKFNP-NAL-PVVNGITIKDVWGTKV-QQSGL 380
M N + G G P D + P AL P I ++ T V +G
Sbjct: 290 VMNNIICPFILNLYYYHGPRGMEPYVSDKEVQPVTALTPKFRHIHFSNITATDVTAAAGF 349
Query: 381 IQGLKNSPFTGICLSNIN--LQGVAGPTSPPL 410
+ GL P I S+I ++ A P P +
Sbjct: 350 MYGLPEMPVEDITFSHIRIAMKPDAEPDLPAM 381
>gi|386727675|ref|YP_006194001.1| hypothetical protein B2K_37015 [Paenibacillus mucilaginosus K02]
gi|384094800|gb|AFH66236.1| hypothetical protein B2K_37015 [Paenibacillus mucilaginosus K02]
Length = 505
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 134/401 (33%), Positives = 189/401 (47%), Gaps = 55/401 (13%)
Query: 52 TLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTW 111
T NT A AI + GG +YVP G Y+TG L SH+TL L G+V++ T
Sbjct: 16 TRNTPAIAAAI---EACSAGGGGTVYVPAGDYVTGPIVLRSHITLQLEAGSVLRFTPRFD 72
Query: 112 NWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWR----- 166
+P P+ + G E G Y I+G+GL+ V I GE G I+GQG WW+ +R
Sbjct: 73 AYP---PVQTRWSGYEMWG--YSPLIYGNGLKQVAIKGE-GVIEGQGQAWWDAYRVIRAG 126
Query: 167 -----QRTLP-----------------------FTRPNLIEFMNSRSIIISNVIFQNSPF 198
LP F RP L++ M+ +++ + QNSPF
Sbjct: 127 GAAPASEHLPKLVELNRVLTDTVKSNIVEWQTQFLRPPLLQLMHCEEVVLEGITLQNSPF 186
Query: 199 WNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDE 258
WN H VYC +V +R V P+ +PN DG+D DS SNV I D + GDD + +KSG DE
Sbjct: 187 WNTHLVYCDDVSLRGVKFKNPSTTPNGDGLDVDSCSNVRISDCHFDVGDDCLCLKSGIDE 246
Query: 259 YGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIG 318
G G P+ + + T G+ +GSET+GG+ NV + GI +KTN
Sbjct: 247 DGRRVGRPTENVAVTNCTMLHGHGGVVLGSETAGGIRNVTISNCIFIGTDRGIRIKTNRA 306
Query: 319 RGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFN-----PNALPVVNG------ITI 367
RGG + N+ +S++YME+ + I H D+ N P A+PV G I I
Sbjct: 307 RGGGVENVRISNIYMEDVLCPLAINA-FYKHGIDESNPLLTSPEAVPVTEGTPVIRHIQI 365
Query: 368 KDVWGTKVQ-QSGLIQGLKNSPFTGICLSNINLQGVAGPTS 407
DV + +G I GL P + L ++ + P
Sbjct: 366 SDVTAKNARAAAGFIYGLPEMPIEDVALRHVTFEMTLDPAE 406
>gi|294816001|ref|ZP_06774644.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
gi|326444344|ref|ZP_08219078.1| glycoside hydrolase family 28 [Streptomyces clavuligerus ATCC
27064]
gi|294328600|gb|EFG10243.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
Length = 477
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 139/417 (33%), Positives = 206/417 (49%), Gaps = 62/417 (14%)
Query: 29 IVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSF 88
I P + N + IT +G VGDG T NT+AFR+A I+ R+GG + VP G +LTG+
Sbjct: 55 IRPPTFPNRRFDITRYGAVGDGVTKNTRAFRDA---IRACHRAGGGRVVVPRGRFLTGAI 111
Query: 89 NLTSHMTLYLAKGAVIKATQDTWNW-PLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVI 147
L S + L++ +G + + D ++ P++ + R Y SFI+ G QD+ I
Sbjct: 112 QLRSQVELHVREGGTVLFSTDPRDYLPMV-----FTRWEGTECWNYSSFIYARGQQDLAI 166
Query: 148 TGENGTIDGQG-AIWWNMWR------------------------QRTL---PFTRPNLIE 179
TG GT+DGQG A W WR QR RPN+I+
Sbjct: 167 TGR-GTLDGQGMAGPWKSWRDPGGNALVDQAELRRMGTEGVPVDQRLFGDGHHLRPNMIQ 225
Query: 180 FMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIE 239
F + R+I++ ++ P W IHPV C NV +R V ++ + N+DG+DP+ +S++ I
Sbjct: 226 FYDCRNILMQDITVLEPPMWTIHPVLCRNVTLRNVDVIGRIN--NSDGVDPECTSDMLIT 283
Query: 240 DSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLA 299
T DD +AVKSG DE G G PS I IR S + G+AVGSE SGGV +V A
Sbjct: 284 GCRFHTEDDSIAVKSGRDEDGHRIGVPSRNIVIRDCVFSGRWGGVAVGSEMSGGVRDVFA 343
Query: 300 EHINL--------YNVGVGIHVKTNIGRGG-----FIRNITVSDVYMENARKGIKIAGDV 346
E + YN + +KTN RGG +IR T + + + AG
Sbjct: 344 EDCRINPVDFPGRYNPRHPVFIKTNKKRGGSITGVYIRRFTGRAIDRDCVYLTTRYAGQQ 403
Query: 347 GDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 403
G+ P V+ I I+D+ +++ ++GL + PFTG+ ++ G+A
Sbjct: 404 GERP---------AVIRDIRIEDMVHDGARRAIHLEGLDSDPFTGVHIARCRFTGMA 451
>gi|254392545|ref|ZP_05007723.1| glycoside hydrolase [Streptomyces clavuligerus ATCC 27064]
gi|197706210|gb|EDY52022.1| glycoside hydrolase [Streptomyces clavuligerus ATCC 27064]
Length = 462
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 139/417 (33%), Positives = 206/417 (49%), Gaps = 62/417 (14%)
Query: 29 IVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSF 88
I P + N + IT +G VGDG T NT+AFR+A I+ R+GG + VP G +LTG+
Sbjct: 40 IRPPTFPNRRFDITRYGAVGDGVTKNTRAFRDA---IRACHRAGGGRVVVPRGRFLTGAI 96
Query: 89 NLTSHMTLYLAKGAVIKATQDTWNW-PLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVI 147
L S + L++ +G + + D ++ P++ + R Y SFI+ G QD+ I
Sbjct: 97 QLRSQVELHVREGGTVLFSTDPRDYLPMV-----FTRWEGTECWNYSSFIYARGQQDLAI 151
Query: 148 TGENGTIDGQG-AIWWNMWR------------------------QRTL---PFTRPNLIE 179
TG GT+DGQG A W WR QR RPN+I+
Sbjct: 152 TGR-GTLDGQGMAGPWKSWRDPGGNALVDQAELRRMGTEGVPVDQRLFGDGHHLRPNMIQ 210
Query: 180 FMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIE 239
F + R+I++ ++ P W IHPV C NV +R V ++ + N+DG+DP+ +S++ I
Sbjct: 211 FYDCRNILMQDITVLEPPMWTIHPVLCRNVTLRNVDVIGRIN--NSDGVDPECTSDMLIT 268
Query: 240 DSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLA 299
T DD +AVKSG DE G G PS I IR S + G+AVGSE SGGV +V A
Sbjct: 269 GCRFHTEDDSIAVKSGRDEDGHRIGVPSRNIVIRDCVFSGRWGGVAVGSEMSGGVRDVFA 328
Query: 300 EHINL--------YNVGVGIHVKTNIGRGG-----FIRNITVSDVYMENARKGIKIAGDV 346
E + YN + +KTN RGG +IR T + + + AG
Sbjct: 329 EDCRINPVDFPGRYNPRHPVFIKTNKKRGGSITGVYIRRFTGRAIDRDCVYLTTRYAGQQ 388
Query: 347 GDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 403
G+ P V+ I I+D+ +++ ++GL + PFTG+ ++ G+A
Sbjct: 389 GERP---------AVIRDIRIEDMVHDGARRAIHLEGLDSDPFTGVHIARCRFTGMA 436
>gi|337752008|ref|YP_004646170.1| hypothetical protein KNP414_07814 [Paenibacillus mucilaginosus
KNP414]
gi|336303197|gb|AEI46300.1| hypothetical protein KNP414_07814 [Paenibacillus mucilaginosus
KNP414]
Length = 506
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 137/413 (33%), Positives = 193/413 (46%), Gaps = 55/413 (13%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
IT +G GDG NT A AI GG +YVP G Y+TG L SH+TL L
Sbjct: 5 DITSYGAQGDGLQDNTAAIAAAIEACS---AGGGGTVYVPAGDYVTGPIVLRSHITLQLE 61
Query: 100 KGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGA 159
G++++ T + AP+ + G E G Y I+G+GL+ V I GE G I+GQG
Sbjct: 62 AGSMLRFTP---RFDAYAPVQTRWSGYEMWG--YSPLIYGNGLKQVAIKGE-GVIEGQGQ 115
Query: 160 IWWNMWR----------QRTLP-----------------------FTRPNLIEFMNSRSI 186
WW+ +R LP F RP L++ M+ +
Sbjct: 116 AWWDAYRVIRAGGTAPASEHLPKLVELNRVLTDTVKSNIVEWQTQFLRPPLLQLMHCEEV 175
Query: 187 IISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTG 246
++ + QNSPFWN H VYC +V +R V P+ +PN DG+D DS SNV I D + G
Sbjct: 176 VLEGITLQNSPFWNTHLVYCDDVSLRGVKFKNPSTTPNGDGLDVDSCSNVRISDCHFDVG 235
Query: 247 DDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYN 306
DD + +KSG D G G P+ + + T G+ +GSET+GG+ NV +
Sbjct: 236 DDCLCLKSGIDADGRRVGRPTENVAVTNCTMLHGHGGVVLGSETAGGIRNVTISNCIFIG 295
Query: 307 VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFN-----PNALPV 361
GI +KTN RGG + N+ +S++YME+ + I H D+ N P A+PV
Sbjct: 296 TDRGIRIKTNRARGGGVENVRISNIYMEDVLCPLAINA-FYKHGIDESNPLLTSPEAVPV 354
Query: 362 VNG------ITIKDVWGTKVQ-QSGLIQGLKNSPFTGICLSNINLQGVAGPTS 407
G I I DV + +G I GL P + L ++ + P
Sbjct: 355 TEGTPVIRHIQISDVTAKNARAAAGFIYGLPEMPIEDVALRHVTFEMTLDPAE 407
>gi|359477236|ref|XP_003631950.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 275
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 102/202 (50%), Positives = 132/202 (65%), Gaps = 10/202 (4%)
Query: 231 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVT-GSSPFSGIAVGSE 289
DSS + CIED I+ G D +A+KSGWDEYGIAYG P++ + IRRV SS S +A GSE
Sbjct: 51 DSSDSTCIEDCSIAMGHDAIALKSGWDEYGIAYGRPTTNVHIRRVNLQSSSGSSLAFGSE 110
Query: 290 TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDH 349
SGG+ NV E ++LYN GI +T GRGG+I+ I +SDV MEN G +G H
Sbjct: 111 MSGGISNVCVEQVHLYNSFSGIEFRTTKGRGGYIQEIIISDVAMENIHTAFSATGQIGSH 170
Query: 350 PDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPP 409
PDD F+PNALPV++ IT+++V GT + +G G++ SPFT ICLSNI+L T+PP
Sbjct: 171 PDDHFDPNALPVLDHITLQNVIGTNITIAGSFTGIQESPFTSICLSNISLS-----TTPP 225
Query: 410 LK----CSDVSGSAYQVKPWPC 427
CS+VSG + V P PC
Sbjct: 226 ASISWVCSNVSGFSQWVFPEPC 247
>gi|255594301|ref|XP_002536062.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223521016|gb|EEF26321.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 412
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 135/374 (36%), Positives = 196/374 (52%), Gaps = 39/374 (10%)
Query: 44 FGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAV 103
+G GDG T +T A ++AI GGT++ +Y++G L SH+TL +A G
Sbjct: 28 YGATGDGVTKDTAAIQKAIDDCA--AAGGGTVVLAGAPMYVSGPLVLKSHITLSIATGTT 85
Query: 104 IKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWN 163
+ +++ ++PLI L GR + D D+ I G GTIDG+G WW
Sbjct: 86 LAGSEEHDDYPLIEELRESGR---------QPLLSSDKATDITING-GGTIDGRGQSWWP 135
Query: 164 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD-S 222
R+ RP LI F +S I++ N+ QNSP W I P Y +++V R +T+ AP S
Sbjct: 136 ---DRSAANKRPRLIVFRHSSHILMENITVQNSPSWQIVPYYSTDLVFRNMTVYAPDRVS 192
Query: 223 PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGW------DEYGIAYGHPSSGITIRRVT 276
NTDGIDP SSS+V IE I TGDD +A+KSG DE PS I IR
Sbjct: 193 HNTDGIDPFSSSHVLIEHVTIDTGDDNIAIKSGQPNSPGGDE-------PSHDIVIR--- 242
Query: 277 GSSPF---SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
S F G+++GSE +GGV NVLAE I+ G G+ +K+N RG +++ D+ M
Sbjct: 243 -DSTFLHGHGLSIGSEVAGGVYNVLAERIHFKGTGTGVRIKSNRDRGNELKHFVYRDLKM 301
Query: 334 ENARKGIKIAG---DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT 390
E+ I I+ + D D + P + ITI+++ T +Q+ +I GL SP T
Sbjct: 302 EDVNTPILISEFYPKIPDVIDSQPVGRLTPRFSDITIENLTATGARQAAIIVGLPESPVT 361
Query: 391 GICLSNINLQGVAG 404
G+ L+N+ ++ G
Sbjct: 362 GLKLTNVRIKADKG 375
>gi|413925949|gb|AFW65881.1| hypothetical protein ZEAMMB73_311601 [Zea mays]
Length = 213
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 91/123 (73%), Positives = 105/123 (85%)
Query: 28 GIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGS 87
G+ P ++R + ISI DFGGVGDG+TLNT AFR+A+YRIQH RR GGT L+VP G +L GS
Sbjct: 39 GLAPAKHRPEVISIADFGGVGDGRTLNTWAFRKAVYRIQHQRRRGGTTLHVPAGTWLAGS 98
Query: 88 FNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVI 147
FNLTSHMTL+LA+GAV+KATQDT WPL+ PLPSYGRGRE PG RY SFIHGDGL+DVVI
Sbjct: 99 FNLTSHMTLFLARGAVLKATQDTRGWPLVEPLPSYGRGRELPGPRYASFIHGDGLRDVVI 158
Query: 148 TGE 150
TGE
Sbjct: 159 TGE 161
>gi|109509136|gb|ABG34277.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 242
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 100/218 (45%), Positives = 133/218 (61%), Gaps = 3/218 (1%)
Query: 225 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG- 283
TDGI+PDS +NV IED YI +GDD VAVKSGWDEYGIA+G P+ + IRR+T SP+S
Sbjct: 1 TDGINPDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGIAFGMPTQQLIIRRLTCISPYSAT 60
Query: 284 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 343
IA+GSE SGG+ +V AE I N GI +KT +GRG +I++I V + M + K+
Sbjct: 61 IALGSEMSGGIRDVRAEDIVAINTESGIRIKTAVGRGAYIKDIYVKKMTMHTMKWAFKMD 120
Query: 344 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 403
GD HPD+K++PNALPV+ I +D+ V + G+ FTGIC++N+ L A
Sbjct: 121 GDYKSHPDNKYDPNALPVIQNINYRDMVAENVSVAARFNGIAGDKFTGICMANVTLGMTA 180
Query: 404 GPTSPPLKCSDVSGSAYQVKPWPCSELSSS--QQTGAC 439
P C+DV G V P PC L ++ AC
Sbjct: 181 KHKKYPWTCTDVQGMTSGVTPPPCDSLPDQGPEKISAC 218
>gi|373849855|ref|ZP_09592656.1| Polygalacturonase [Opitutaceae bacterium TAV5]
gi|372476020|gb|EHP36029.1| Polygalacturonase [Opitutaceae bacterium TAV5]
Length = 916
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 133/431 (30%), Positives = 201/431 (46%), Gaps = 58/431 (13%)
Query: 12 LSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRS 71
+S F F+L VP + ++ I D G G LNT+A +AI Q R
Sbjct: 1 MSVFTPFALP--------VPPVIPDRRVDIRDHGAHPGGALLNTRAIADAI---QACARQ 49
Query: 72 GGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGG 131
GG + VP G++LTG+ + S + L+L GA ++ +Q+ ++ LP R GG
Sbjct: 50 GGGRVVVPSGIWLTGAIHFRSRIDLHLEAGAELRFSQNPDDY-----LPPVLSQR---GG 101
Query: 132 ----RYMSFIHGDGLQDVVITGENGTIDGQGAIWW----------------NMWRQRTLP 171
Y F++ +D+ ITG G ++GQG WW N RT P
Sbjct: 102 VMIYNYSPFLYAHRCEDISITGA-GLLNGQGQSWWPWKHSQPGMSSIQGPDNFAALRT-P 159
Query: 172 F-----------TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA 220
RP + + + ++I V F++SP W + PV+C+++ +R+ TIL P
Sbjct: 160 LEERVFGTREAGVRPVFCQPIECKRVLIEGVTFRDSPSWTLQPVWCADLTLRHSTILNPP 219
Query: 221 D--SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGS 278
S NTDGIDPD+ NV IE + TGDD + +K+G DE G P I IR
Sbjct: 220 SPFSHNTDGIDPDACRNVLIEHCVVDTGDDAICIKAGRDEDAWEAGIPCENILIRHCEIR 279
Query: 279 SPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK 338
S GI +GSE S GV N+ A I +KT GRGGFI++I + ++ R
Sbjct: 280 SGHGGITIGSEMSAGVRNLHAHDCTCDGTDTAIRIKTKPGRGGFIKDILIENITARRIRH 339
Query: 339 -GIKIA---GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICL 394
+++ GD + P D N +P V I I++V +++ ++GL P + L
Sbjct: 340 AAVELTFHYGDTLEKPPDPKNLKHVPAVENILIRNVRCDSAREALHLRGLPGHPLKNVTL 399
Query: 395 SNINLQGVAGP 405
N+ + P
Sbjct: 400 QNLEIHAFQNP 410
>gi|224537921|ref|ZP_03678460.1| hypothetical protein BACCELL_02810 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520465|gb|EEF89570.1| hypothetical protein BACCELL_02810 [Bacteroides cellulosilyticus
DSM 14838]
Length = 964
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 130/437 (29%), Positives = 192/437 (43%), Gaps = 80/437 (18%)
Query: 37 DKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTL 96
++IS+T++GGVGDG TLNT+ FREAI +HL GG L VP G++LTG L SH+ L
Sbjct: 34 NRISLTEYGGVGDGITLNTECFREAI---EHLSAKGGGTLVVPTGIWLTGPIRLKSHIEL 90
Query: 97 YLAKGAVIKATQDTWNWPLIAPL--PSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
+L K A++ T D W++P + + R + P Y D+ ITGE G I
Sbjct: 91 HLEKNALLIFTSDFWSYPSRSTFFTEVFYRQLQSPISAYNE-------SDIAITGE-GVI 142
Query: 155 DGQGAIW------------WNMWRQ----------------------------------- 167
DG G W W ++
Sbjct: 143 DGSGQDWRPVRKNKVTVDEWEHLQRKSGVLNDAGTIWYPMADDVQRYARREENIIHKYNT 202
Query: 168 -----RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS 222
R + RP L+ + +++ V FQNSPFWN+HP C ++++ V + P +S
Sbjct: 203 PDEWVRLKDYVRPELMHLYHCERVLLQGVTFQNSPFWNLHPELCKHLIVDGVCVRNPWNS 262
Query: 223 PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS 282
N DG+D +S NV + S GDD V +KSG +E G G P+ + + T
Sbjct: 263 QNGDGLDIESCQNVLVVQSTFDVGDDAVCIKSGRNEAGRLRGMPAKNVVVEDCTVFHGHG 322
Query: 283 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM--------- 333
G VGSE SGGV ++L + N G+ K+N RGG + +I + +VYM
Sbjct: 323 GFVVGSEMSGGVHSILVRNCKFLNTDTGLRFKSNRQRGGHVSDIYIQNVYMCGIAAEPIL 382
Query: 334 ----ENARKGIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNS 387
+ ++ D + P P + I I DV + ++ L GL
Sbjct: 383 FDMYYQGKSAVEAMEDALKGSMETIPPVTEKTPKFDHIHISDVHCYQAGRALLFDGLPEQ 442
Query: 388 PFTGICLSNINLQGVAG 404
+ I L N+ + V G
Sbjct: 443 NISDITLRNVTIHAVEG 459
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 179/411 (43%), Gaps = 56/411 (13%)
Query: 34 YRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSH 93
+RN I+ +G + T++ + AI Q GG + +P G Y T + +L S+
Sbjct: 547 FRNQDYVISHYGAQKNQNI--TESLKAAI---QACHTDGGGRVVIPKGEYYTAAIHLLSN 601
Query: 94 MTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMS-FIHGDGLQDVVITGENG 152
+ L+L KGAV++ ++ LP E R +S I+ +G +V ITG G
Sbjct: 602 VNLHLEKGAVLRFLTSPEDY-----LPVVVSRWEGVDCRTLSPLIYANGQTNVAITGA-G 655
Query: 153 TIDGQGAI--WWN---------------------MWRQRTL-----------PFTRPNLI 178
T+DGQ + WW+ +W ++ RP I
Sbjct: 656 TLDGQASRDNWWSWKGRKSSSEQNTEAKVGKDKLLWMEQNRISLDERIFSVNDKLRPPFI 715
Query: 179 EFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCI 238
+F +++ V SPFW +HP+ NV++R V + PN DG DP+S NV I
Sbjct: 716 QFYRCNRVLVEGVTIIRSPFWMLHPLLSKNVIVRGVKF--DSHGPNNDGCDPESCENVLI 773
Query: 239 EDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVL 298
E + GDD VA+KSG + G + PS I +R +G+AVGSE SG +V
Sbjct: 774 ESCDFNNGDDCVAIKSGKNNDGRTWNLPSRNIIVRNCIMRDGHAGVAVGSEISGSCYDVW 833
Query: 299 AEHINLYNVGVG--IHVKTNIGRGGFIRNITVSDVYMENARKGI-KIAGDVGDHPDDKFN 355
+ + + + +K+N RGG + D+ + ++ + ++ +N
Sbjct: 834 VRDCVMDSPSMDRPLRIKSNALRGGVVDGFYARDIRIGECKQAVLRLELQYERVQSGPYN 893
Query: 356 PNALPVVNGITIKDVWGTKVQQSGLIQGLKNS-PFTGICLSNINLQGVAGP 405
PV I +++V K LI+G ++ + L N L+G+ P
Sbjct: 894 ----PVFRNIYLENVTCKKSSYGILIEGFEDRISIFNVRLKNCRLKGIQTP 940
>gi|399031128|ref|ZP_10731267.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398070597|gb|EJL61889.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 524
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 123/380 (32%), Positives = 189/380 (49%), Gaps = 48/380 (12%)
Query: 65 IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGR 124
I+ ++GG ++ P G YLTG+ L S++T++L GA++K +++ ++ + G
Sbjct: 48 IEKASKNGGGTIFFPAGEYLTGALKLKSNITIHLDSGALLKFSENFDDYLPYVEMRYEGI 107
Query: 125 GRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWN-------------------MW 165
+ + + ++++ I G G IDGQG WWN MW
Sbjct: 108 VMQS----FSPLFYAKDVENITIKGR-GVIDGQGKAWWNEVYRIETAKGPIPETKYQKMW 162
Query: 166 RQ------------RTLP--FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVI 211
+ RT+ F RP+ + N ++I+I V F+NSPFW I+P +C NV +
Sbjct: 163 TEQNKGIVYEPYYKRTIDKHFFRPSFFQAYNCKNILIEGVTFKNSPFWTINPEFCDNVTV 222
Query: 212 RYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGIT 271
+TI P SPNTDGI+P S +NV I + +IS GDD + +KSG D G YG + +T
Sbjct: 223 TGITINNPH-SPNTDGINPSSCTNVHISNCHISVGDDCITIKSGRDADGRKYGKATENVT 281
Query: 272 IRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDV 331
I T S G+ +GSE SGG++ + + GI +K GRGG + +I V ++
Sbjct: 282 ITNCTMLSGHGGVVIGSEMSGGIKKITISNCVFDGTDRGIRIKAARGRGGVVEDIRVDNI 341
Query: 332 YMENARKGIKIAGDVGDHPDDKFNP-----NALPVVNGITIKDVWGTKVQQSGLIQGLKN 386
M+N IK + D DK NP P+ I I +V G V ++G ++G+
Sbjct: 342 VMKN----IKEEAIILDLFYDKDNPVEPVTERTPIFRNIHISNVTGGNVNKAGFVRGIVE 397
Query: 387 SPFTGICLSNINLQGVAGPT 406
P I SNIN+ G G T
Sbjct: 398 MPIQNITFSNINMDGKEGFT 417
>gi|225874241|ref|YP_002755700.1| polygalacturonase [Acidobacterium capsulatum ATCC 51196]
gi|225791499|gb|ACO31589.1| polygalacturonase [Acidobacterium capsulatum ATCC 51196]
Length = 428
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 128/373 (34%), Positives = 193/373 (51%), Gaps = 28/373 (7%)
Query: 44 FGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAV 103
+G GDG + +T A + AI +R GGT+L P G YL+ L S++TL L KGA
Sbjct: 38 YGAKGDGVSKDTAAIQHAIDACA--KRGGGTVLLTP-GTYLSAPIVLKSNITLKLEKGAT 94
Query: 104 IKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWN 163
+ + D ++P I + GR S I ++ I G GTI+G GA WW
Sbjct: 95 LLGSPDFNDYPAITEFRAPGR---------QSLISAQNASNITIEGA-GTINGNGASWWK 144
Query: 164 MWRQRT------LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL 217
M R+ +TRP LI F + + +++ V +NSP W I P Y +V+IR + +L
Sbjct: 145 MAREHKDTGVMGSQYTRPRLIVFNHCKHVVLEGVTVENSPMWQIVPYYSDDVIIRNIHVL 204
Query: 218 APADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTG 277
AP +PNTD IDP SSS+V IE + GDD +A+KSG + PS+ ITIR
Sbjct: 205 APQHAPNTDAIDPFSSSHVLIEHVVANVGDDDIAIKSG-EANSPGPDAPSTYITIRDCIF 263
Query: 278 SSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 337
G++VGSE +GG +++LAE+I + GI VK N RG + ++ ++ M N +
Sbjct: 264 LHGH-GLSVGSEIAGGAQHILAENITMTGTDNGIRVKANRDRGNDVSDLVFKNIQMTNVK 322
Query: 338 KGIKIAGDVGDH--PDDKFNPNAL----PVVNGITIKDVWGTKVQQSGLIQGLKNSPFTG 391
+ I+ + H P NP + P + IT+++V T + +G I GL +P
Sbjct: 323 NALIIS-EFYPHIYPPMPDNPAPITRLTPHFHNITVENVTATNSKNAGAIAGLPEAPIRD 381
Query: 392 ICLSNINLQGVAG 404
+ L N+++ G
Sbjct: 382 VVLKNVSIDAQKG 394
>gi|413925950|gb|AFW65882.1| hypothetical protein ZEAMMB73_311601 [Zea mays]
Length = 163
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 89/121 (73%), Positives = 103/121 (85%)
Query: 28 GIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGS 87
G+ P ++R + ISI DFGGVGDG+TLNT AFR+A+YRIQH RR GGT L+VP G +L GS
Sbjct: 39 GLAPAKHRPEVISIADFGGVGDGRTLNTWAFRKAVYRIQHQRRRGGTTLHVPAGTWLAGS 98
Query: 88 FNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVI 147
FNLTSHMTL+LA+GAV+KATQDT WPL+ PLPSYGRGRE PG RY SFIHGDGL+DVVI
Sbjct: 99 FNLTSHMTLFLARGAVLKATQDTRGWPLVEPLPSYGRGRELPGPRYASFIHGDGLRDVVI 158
Query: 148 T 148
T
Sbjct: 159 T 159
>gi|146301824|ref|YP_001196415.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156242|gb|ABQ07096.1| Polygalacturonase-like protein; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 522
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 125/411 (30%), Positives = 204/411 (49%), Gaps = 53/411 (12%)
Query: 55 TKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWP 114
T+A + AI + ++GG ++ P G YLTG+ L S++T++L GA++K +++ ++
Sbjct: 39 TQAIQNAI---EKASKNGGGTIFFPAGEYLTGALTLRSNITIHLDSGALLKFSENFDDFL 95
Query: 115 LIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWN----------- 163
+ G + + + +Q++ ITG G IDGQG WWN
Sbjct: 96 PYVEMRYEGIVMKS----FQPLFYAKDVQNITITGR-GVIDGQGKAWWNEVYRIETAKEP 150
Query: 164 --------MWRQ------------RTL--PFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 201
MW + RT+ F RP+ + N ++I+I V FQNSPFW I
Sbjct: 151 LPPTKYQTMWEEQNKGLYTEPYYKRTVDKKFFRPSFFQAYNCKNILIEGVTFQNSPFWTI 210
Query: 202 HPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 261
+P +C NV + ++I P SPNTDGI+P S +NV I + +IS GDD + +KSG D G
Sbjct: 211 NPEFCDNVTVTGISIFNP-HSPNTDGINPSSCTNVHISNCHISVGDDCITIKSGRDGDGR 269
Query: 262 AYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGG 321
YG + +TI T S G+ +GSE SGG++ + + GI +K+ GRGG
Sbjct: 270 KYGKATENVTITNCTMLSGHGGVVIGSEMSGGIKKITISNCVFDGTDRGIRIKSARGRGG 329
Query: 322 FIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSG 379
+ +I V ++ M+N ++ + D + P P+ I + ++ + V ++G
Sbjct: 330 VVEDIRVDNIVMKNIKEEAIVLSLFYDK-GTQVEPVTEKTPIFRNIHMSNITASNVNKAG 388
Query: 380 LIQGLKNSPFTGICLSNINLQGVAG---PTSPPLKCSDVS-----GSAYQV 422
I G+ P I SNIN+ G G T+ ++ DV GS++++
Sbjct: 389 QILGITEMPIQNITFSNINMDGKEGFTVSTATDVEFHDVKVNATVGSSFKI 439
>gi|109509132|gb|ABG34275.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 238
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 94/213 (44%), Positives = 130/213 (61%), Gaps = 1/213 (0%)
Query: 225 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG- 283
TDG+DPDS +N IED +I +GDD VAVKSGWDEYGI+YG P+ + IRR+T SP+S
Sbjct: 1 TDGVDPDSCTNTRIEDVHIVSGDDCVAVKSGWDEYGISYGMPTKQLVIRRLTCISPYSAM 60
Query: 284 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 343
IA+GSE SGG+E+V AE I N GI +KT +GRGG++++I V + M + +
Sbjct: 61 IALGSEMSGGIEDVRAEDITAINTESGIRIKTAMGRGGYVKDIYVRGMKMHTMKWAFWMD 120
Query: 344 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 403
G+ G HPD ++P A P++ GI +D+ V ++G+ +PFTGIC+SN +
Sbjct: 121 GNYGSHPDPHYDPKARPIITGINYRDIVAENVTMVAQLKGIPGNPFTGICISNATITMAP 180
Query: 404 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQT 436
P CSD+ G V P PC L + T
Sbjct: 181 ESKKEPWTCSDIHGITSGVTPQPCGMLPAETTT 213
>gi|116620373|ref|YP_822529.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116223535|gb|ABJ82244.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 446
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 133/391 (34%), Positives = 186/391 (47%), Gaps = 37/391 (9%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+ + FG GDGK +T A AI +GG + V PG YLTG+ L S++TL
Sbjct: 21 EFDVKTFGAAGDGKKKDTAAIARAIDAAAK---AGGGTVVVSPGRYLTGALTLKSNVTLD 77
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
+ GA + + D ++PL + +G +E Y S I+ DG + I G GTIDGQ
Sbjct: 78 VEAGATLLGSPDPEDYPLRENV--WGEKKE-----YSSLIYADGAVHITIRGR-GTIDGQ 129
Query: 158 GAIWWNM--W--------RQRT---------LPFTRPNLIEFMNSRSIIISNVIFQNSPF 198
G WW W QRT L + RP++I+ + S+ ++I + NS
Sbjct: 130 GQAWWKRMGWPDRRKIAPEQRTAAERAELAKLEYGRPHMIKLVRSKHVVIEGLHLINSAS 189
Query: 199 WNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDE 258
W ++P+ C V I +TI P SPNTDGI+P+S NV I +S I GDD V +KSG DE
Sbjct: 190 WTVNPLLCEFVRIDGITIENPVPSPNTDGINPESCRNVQILNSRIDVGDDCVTLKSGKDE 249
Query: 259 YGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIG 318
G G P ITI + +GSE SGGV NV+ + VGI VK+ G
Sbjct: 250 AGRRVGRPDENITITNCVMLKGHGAVTIGSEMSGGVRNVVVSNCVFQGTDVGIRVKSQRG 309
Query: 319 RGGFIRNITVSDVYMENARKGIKI----AGDVGDHPDDKFN-PNALPVVNGITIKDVWGT 373
RGG + VS+V M++ + AG D P D F P + ++
Sbjct: 310 RGGIVEGFVVSNVVMQDVASAFTLTSFYAGT--DKPGDLFPVGEGTPRLRDFRFSNITAR 367
Query: 374 KVQQSGLIQGLKNSPFTGICLSNINLQGVAG 404
+ +G I GLK P I + + +Q G
Sbjct: 368 GSKTAGQITGLKEMPIENITFTGVRIQAETG 398
>gi|23099543|ref|NP_693009.1| hypothetical protein OB2088 [Oceanobacillus iheyensis HTE831]
gi|22777773|dbj|BAC14044.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 495
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 129/409 (31%), Positives = 192/409 (46%), Gaps = 52/409 (12%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
+IT+FG GD T NT++ AI R SGG LY+P G YLTG +L S++T+Y+
Sbjct: 4 NITEFGAKGDSNTDNTESISSAIKRCAD---SGGGTLYIPAGTYLTGPISLISNLTIYIE 60
Query: 100 KGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGA 159
GA + D +P P+ + G E G + ++G+GL +V I G +G IDGQG
Sbjct: 61 SGAKLVFIDDFSAYP---PVKTRWSGYECYG--FSPLLYGNGLTNVSIIG-SGCIDGQGE 114
Query: 160 IWWN---------------------MWRQRTLP-----------FTRPNLIEFMNSRSII 187
WW + + T P F RP L++ + S+
Sbjct: 115 AWWEVNHLLRKGEEYDHPQTKEIAELNKSITEPKNTNLVEWPSQFLRPPLLQMYDCDSVT 174
Query: 188 ISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGD 247
+ + +NSPFWN H VYC NV I V P D+PN DG+D DS SNV + + + GD
Sbjct: 175 LDGITLENSPFWNTHFVYCDNVTIHNVKFKNPWDTPNGDGLDLDSCSNVRVSNCHFDVGD 234
Query: 248 DLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNV 307
D +A KSG +E G P+ + + T + GI +GSE SGG+ N+ +
Sbjct: 235 DCLAFKSGINEDGRRVARPTENVAVTNCTMKNGHGGIVMGSENSGGIRNIAVSNCVFIGT 294
Query: 308 GVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG------DVGDHPDDKFNP----N 357
GI +KTN RG +IR+I + ++YM+ + I D D ++ +P
Sbjct: 295 DRGIRLKTNRARGSYIRDILIDNIYMDGVLCPLAINSFYRHGLDKSDSLINELSPIEISE 354
Query: 358 ALPVVNGITIKDVWGTKVQQ-SGLIQGLKNSPFTGICLSNINLQGVAGP 405
P + I I +V + +G I GL I L ++ ++ P
Sbjct: 355 KTPEIEYIHISNVTARNCRSAAGFIYGLPEKYVKDIILRHVLIEMTINP 403
>gi|395803596|ref|ZP_10482840.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434150|gb|EJG00100.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 522
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 124/411 (30%), Positives = 203/411 (49%), Gaps = 53/411 (12%)
Query: 55 TKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWP 114
T+A + AI + ++GG ++ P G YLTG+ L S++T++L GA++K +++ ++
Sbjct: 39 TQAIQNAI---EKASKNGGGTIFFPAGEYLTGALTLKSNITIHLDSGALLKFSENFDDFL 95
Query: 115 LIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWN----------- 163
+ G + + + ++++ ITG G IDGQG WWN
Sbjct: 96 PYVEMRYEGIVMKS----FQPLFYAKDVENIAITGR-GIIDGQGKAWWNEVYRIETAKEP 150
Query: 164 --------MWRQ------------RTL--PFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 201
MW + RT+ F RP+ + N ++I+I V F+NSPFW I
Sbjct: 151 LPPTKYQTMWEEQNKGLYTEPYYKRTVDKKFFRPSFFQAYNCKNILIEGVTFKNSPFWTI 210
Query: 202 HPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 261
+P +C NV + ++I P SPNTDGI+P S +NV I D +IS GDD + +KSG D G
Sbjct: 211 NPEFCDNVRVTGISIFNPH-SPNTDGINPSSCTNVHISDCHISVGDDCITIKSGRDGDGR 269
Query: 262 AYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGG 321
YG + +TI T S G+ +GSE SGG++ + + GI +K+ GRGG
Sbjct: 270 KYGKATENVTITNCTMLSGHGGVVIGSEMSGGIKKITISNCVFDGTDRGIRIKSARGRGG 329
Query: 322 FIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSG 379
+ +I V ++ M+N ++ + D P P+ I + ++ + V ++G
Sbjct: 330 VVEDIRVDNIVMKNIKEEAIVLSLFYDK-GTTVEPVTEKTPIFRNIHMSNITASNVNKAG 388
Query: 380 LIQGLKNSPFTGICLSNINLQGVAG---PTSPPLKCSDVS-----GSAYQV 422
I G+ P I SNIN+ G G T+ ++ DV GS++++
Sbjct: 389 QILGITEMPIQNITFSNINMDGKEGFTVSTTTDVEFHDVKVNATVGSSFKI 439
>gi|255692376|ref|ZP_05416051.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260621842|gb|EEX44713.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 513
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 126/416 (30%), Positives = 195/416 (46%), Gaps = 62/416 (14%)
Query: 65 IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNW-PLIAPLPSYG 123
I+ GG +Y P GVYLT + ++ S++TLY+ GAV++ + ++ P +
Sbjct: 45 IEKASSEGGGTIYFPAGVYLTATIHMKSNITLYVESGAVLRFSDRFEDYLPFV------- 97
Query: 124 RGRERPGGRYMS----FIHGDGLQDVVITGENGTIDGQGAIWWN---------------- 163
+ R G M+ I+ +++ ITG GT+DG G WW+
Sbjct: 98 --KIRWEGTVMNTLSPLIYAHDAENLTITGR-GTLDGNGFKWWSWEKETRELIKKNGGKL 154
Query: 164 --------MWRQRTLPFT--------------RPNLIEFMNSRSIIISNVIFQNSPFWNI 201
MW + RP I+F +++I NV NSPFW I
Sbjct: 155 PALNKLQRMWEEANEELEISDYYKPSLERRMFRPPFIQFYECNNVLIENVRIVNSPFWTI 214
Query: 202 HPVYCSNVVIRYVTILAPADSP---NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDE 258
+P +C NV + VTI P+ P NTDGI+P S NV I D +IS GDD + +KSG D
Sbjct: 215 NPAFCDNVTVHGVTIYNPSKDPKGPNTDGINPSSCRNVRISDCFISVGDDCITIKSGRDA 274
Query: 259 YGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIG 318
G YG ITI S G+ +GSE SGGV V + + GI +K++ G
Sbjct: 275 DGRKYGKACENITITNCVMLSGHGGVVIGSEMSGGVRRVTISNCVFDGIDSGIRLKSSRG 334
Query: 319 RGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQ 376
RGG + + V ++ M+N ++ I D+ + K P PV I + ++ G+ ++
Sbjct: 335 RGGVVEELRVDNIVMKNIQRNAFIF-DLFYDKESKMEPVSERTPVFRNIHLSNITGSDIK 393
Query: 377 QSGLIQGLKNSPFTGICLSNINLQGVAG---PTSPPLKCSDVSGSAYQVKPWPCSE 429
Q G I+G++ P G+ SNIN++ G + ++ +V S+ PW S+
Sbjct: 394 QIGYIKGIEEMPVQGLSFSNINMKAEVGFIVDIAEDIRFDNVDFSSQTGSPWQFSK 449
>gi|109509134|gb|ABG34276.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 241
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 94/206 (45%), Positives = 131/206 (63%), Gaps = 1/206 (0%)
Query: 226 DGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-I 284
DGI+PDS +N IED YI +GDD VAVKSGWDEYGIAYG P+ + IRR+T SP S I
Sbjct: 1 DGINPDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPTSAVI 60
Query: 285 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG 344
A+GSE SGG+E+V AE I N G+ +KT IGRGG++++I V + M + + G
Sbjct: 61 ALGSEMSGGIEDVRAEDILAINSESGVRIKTAIGRGGYVKDIYVKGMTMRTMKWVFWMTG 120
Query: 345 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 404
+ G H D+ ++PNALP++ I +D+ V + ++G+ PFTGIC+SN+ +
Sbjct: 121 NYGSHADNNYDPNALPLIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIGLAQK 180
Query: 405 PTSPPLKCSDVSGSAYQVKPWPCSEL 430
P C+D+SG + V P PC+ L
Sbjct: 181 PKKLQWNCTDISGISSSVVPQPCNAL 206
>gi|448413184|ref|ZP_21577030.1| glycoside hydrolase family 28 [Halosimplex carlsbadense 2-9-1]
gi|445667365|gb|ELZ20009.1| glycoside hydrolase family 28 [Halosimplex carlsbadense 2-9-1]
Length = 515
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 132/398 (33%), Positives = 184/398 (46%), Gaps = 41/398 (10%)
Query: 32 MRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLT 91
M + + + DFG VG G +T A + A+ +GGT++ VP G YLTG +
Sbjct: 1 MTDSDGRRDVRDFGAVGTGDERDTAALQSAL---DECAGTGGTVV-VPSGKYLTGPLTVG 56
Query: 92 SHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGEN 151
SH TL L GA + +D +P S G E+ G + ++V ITG
Sbjct: 57 SHTTLELEAGATLSFVRDHEAFP---ARESRWEGWEQTGFHPCLLVAE--AENVEITGR- 110
Query: 152 GTIDGQGAIWWNMW--RQRTLP----------------------FT-RPNLIEFMNSRSI 186
GT+DGQG WW + LP FT RP L + S ++
Sbjct: 111 GTVDGQGDYWWQFYGVDDDELPASLADRLDSFHEANDKADDVSSFTLRPPLFQVDRSTNV 170
Query: 187 IISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTG 246
+S + +NSPFWN H VY NV + V + PAD+PN DGID DSS V I D Y++ G
Sbjct: 171 SVSGITLRNSPFWNTHVVYSDNVTLHDVNVENPADAPNGDGIDIDSSRYVRISDCYLNAG 230
Query: 247 DDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYN 306
DD V +KSG DE G G P+SGIT+ T + G+ +GSE SG V +V + +
Sbjct: 231 DDAVCIKSGKDEEGRRIGRPASGITVTNCTVEAGHGGVVIGSEMSGDVRDVTVSNCTFTD 290
Query: 307 VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG----DVGDHPDDKFNPNALPVV 362
GI +KT GRGG + + ++ M I G D+ P + P+V
Sbjct: 291 TDRGIRIKTQRGRGGVVEDCRFDNLVMRRVACPFTINGYYFMDIDSDP--IPVDESTPMV 348
Query: 363 NGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 400
I D+ V+ +G GL F I SN+ +
Sbjct: 349 RNIAYSDIIARDVETAGFFAGLPEQRFENISFSNVEID 386
>gi|284172853|ref|YP_003406235.1| glycoside hydrolase family 28 [Haloterrigena turkmenica DSM 5511]
gi|284017613|gb|ADB63562.1| glycoside hydrolase family 28 [Haloterrigena turkmenica DSM 5511]
Length = 541
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 127/412 (30%), Positives = 191/412 (46%), Gaps = 50/412 (12%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
D I ++G GD L+T+A + A+ SGGT+ YVP G Y+TG +
Sbjct: 30 ETDGFDIREYGATGDSDALDTEAIQTAL---DECAESGGTV-YVPSGTYVTGPLRVGDQT 85
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL+L GA ++ D +P + S G + G + + D ++V ITG GTI
Sbjct: 86 TLHLDAGATLQFVGDYEAFPTVQ---SRWEGWNQYG--FHPCLLVDDAENVSITG-RGTI 139
Query: 155 DGQGAIWWNMW-----------RQRTLPFT--------------RPNLIEFMNSRSIIIS 189
DG G WW + ++R F RP L + S ++ +S
Sbjct: 140 DGGGEYWWQFYDAPESEIPDGLQERLAEFEEKNEKQDDVSSFTHRPPLFQISESENVSVS 199
Query: 190 NVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDL 249
V +NSPFWN H VY NV I V I PAD+PN DGID DSS V I D+YI+ GDD
Sbjct: 200 GVTLENSPFWNTHVVYSENVTITDVNIANPADAPNGDGIDIDSSRYVRISDTYINAGDDA 259
Query: 250 VAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGV 309
+ +KSG + G G P+S IT+ T + G+ +GSE SG V +V + +
Sbjct: 260 ICIKSGKNAEGREVGEPASQITVTNCTVEAGHGGVVIGSEMSGDVRDVTVSNCTFTDTDR 319
Query: 310 GIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG------DVGDHPDDKFNPNALPVVN 363
G+ +KT RGG + ++ ++ M I G D P D+ P+V
Sbjct: 320 GVRIKTARDRGGVVEDLRFDNIVMRRIACPFTINGYYFMPLDSDSEPVDE----GTPMVR 375
Query: 364 GITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDV 415
++ ++ +V+ +G GL F GI +++ + + PL +D+
Sbjct: 376 NVSFTNITARQVETAGFFAGLPEQYFEGISFNDVQIDA-----TRPLDATDL 422
>gi|146301851|ref|YP_001196442.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156269|gb|ABQ07123.1| Polygalacturonase-like protein; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 560
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 133/436 (30%), Positives = 199/436 (45%), Gaps = 78/436 (17%)
Query: 37 DKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTL 96
+ ++I DFG V G LNTKAF +AI + + GG + +PPG++LTG L S++ L
Sbjct: 51 NSVNIKDFGAVNGGYVLNTKAFADAI---DAVSKKGGGKVIIPPGIWLTGPIILKSNIEL 107
Query: 97 YLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGG-RYMSFIHGDGLQDVVITGENGTID 155
+ +GA+IK + D +P+I G E R +S I+G L+++ TG NG D
Sbjct: 108 HAERGALIKFSTDKSLYPII------GTNFEGLNTWRCISPIYGKNLENIAFTG-NGVWD 160
Query: 156 GQGAIWWNM---------WR------------------------------QRTLP----- 171
G G +W + W+ Q P
Sbjct: 161 GSGEVWRQVKKSKLTESQWKKFVSSGGVLNKDKTSWYPSETFMNASKGADQNVRPDLKTK 220
Query: 172 --------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 223
F RP ++ NS+ ++ +FQNSP WNIHP ++++R VT+ P S
Sbjct: 221 EEFETIHDFLRPVMVSIQNSKRVLFDGPVFQNSPAWNIHPFMVEDLIVRNVTVRNPWYSQ 280
Query: 224 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 283
N DG+D + NV +E+S GDD + +KSG D+ G+ G P I +R G
Sbjct: 281 NGDGLDVECCKNVLVENSSFDVGDDAICIKSGKDKDGLERGIPCENIIVRNNIVYHGHGG 340
Query: 284 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYME--------- 334
+ VGSE SGGV+N+ + VG+ K+ GRGG + NI +SDV+M
Sbjct: 341 VTVGSEMSGGVKNLHVSNCTFMGTDVGLRFKSARGRGGVVENIFISDVFMTDIPSQAISF 400
Query: 335 NARKGIKIAGDVGDHPDDKFNPNALPVV------NGITIKDVWGTKVQQSGLIQGLKNSP 388
N G K + + DK A+PV I+IK++ QQ+ +QGL
Sbjct: 401 NLYYGGKSIAETLEEGGDKIVNKAMPVTIETPQFKNISIKNITIKGAQQAVFLQGLPEMN 460
Query: 389 FTGICLSNINLQGVAG 404
I +SN+ + G
Sbjct: 461 LENIEISNLTVTAEKG 476
>gi|448394041|ref|ZP_21567906.1| glycoside hydrolase family 28 [Haloterrigena salina JCM 13891]
gi|445662631|gb|ELZ15395.1| glycoside hydrolase family 28 [Haloterrigena salina JCM 13891]
Length = 518
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 125/397 (31%), Positives = 184/397 (46%), Gaps = 45/397 (11%)
Query: 37 DKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTL 96
D I ++G GD +T+A + A+ SGGT+ YVP G Y+TG + TL
Sbjct: 7 DGFDIREYGATGDSDEPDTEAIQAAL---DECAESGGTV-YVPSGTYVTGPLRVGDRTTL 62
Query: 97 YLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDG 156
YL GA ++ D +P + S G + G + + D ++V ITG GTIDG
Sbjct: 63 YLDAGATLQFVGDYEAFPTVQ---SRWEGWNQYG--FHPCLLVDDAENVSITG-RGTIDG 116
Query: 157 QGAIWWNMW-----------RQRTLPFT--------------RPNLIEFMNSRSIIISNV 191
G WW + ++R F RP L + S ++ +S V
Sbjct: 117 GGEYWWQFYDAPESEIPDGLQERLAEFEEKNEKQDDVSSFTHRPPLFQIYGSENVSVSGV 176
Query: 192 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 251
+NSPFWN H VY NV I V I PAD+PN DGID DSS V I D+YI+ GDD +
Sbjct: 177 TLENSPFWNTHVVYSENVTITDVNIANPADAPNGDGIDIDSSRYVRISDTYINAGDDAIC 236
Query: 252 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGI 311
+KSG + G G P+S IT+ T + G+ +GSE SG V +V + + G+
Sbjct: 237 IKSGKNAEGREVGEPASQITVTNCTVEAGHGGVVIGSEMSGDVRDVTVTNCTFTDTDRGV 296
Query: 312 HVKTNIGRGGFIRNITVSDVYMENARKGIKIAG------DVGDHPDDKFNPNALPVVNGI 365
+KT RGG + ++ ++ M I G D P D+ P+V +
Sbjct: 297 RIKTARNRGGVVEDLRFDNIVMRRIACPFTINGYYFMPLDSDSEPVDE----GTPMVRNV 352
Query: 366 TIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 402
+ ++ +V+ +G GL F GI S++ +
Sbjct: 353 SFTNITARQVETAGFFAGLPEQYFEGISFSDVQIDAT 389
>gi|308069843|ref|YP_003871448.1| polygalacturonase [Paenibacillus polymyxa E681]
gi|305859122|gb|ADM70910.1| Polygalacturonase (Pectinase) (PGL) [Paenibacillus polymyxa E681]
Length = 453
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 127/373 (34%), Positives = 195/373 (52%), Gaps = 24/373 (6%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
+I D+G V DG TL T A AI + +GG ++VP G YLTG+ L S++ L+++
Sbjct: 5 NIVDYGAVQDGTTLATGAIASAIEAASN---AGGGTVFVPSGTYLTGAIFLKSNIELHVS 61
Query: 100 KGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGA 159
GA + + + ++P++ S G +R + S I+G+ L+++ +TG +GT+DG G
Sbjct: 62 PGATLSFSTELADYPVVE---SRWEGVQRE--VHASCIYGENLENISVTG-SGTLDGNGQ 115
Query: 160 IWWNMWRQ--RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL 217
WW R L + RP LI F + + I +V+ +NSP W ++P+ C NV I ++IL
Sbjct: 116 PWWQKHRNHPEELQYPRPKLISFDRCQRVTIKDVMLKNSPSWTVNPIACYNVTIDNLSIL 175
Query: 218 APADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTG 277
PADSPNTDGI+P+S SNV I + I GDD +A+K+G ++ P ITI T
Sbjct: 176 NPADSPNTDGINPESCSNVRISNCNIDVGDDCIAIKAGTED--TQERIPCENITITNCTM 233
Query: 278 SSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 337
+ +GSE SG + NV + GI +K+ GRGG I +I VS++ ME+
Sbjct: 234 VHGHGAVVLGSEMSGDIRNVTISNCVFKQTDRGIRLKSRRGRGGTIEDIRVSNIVMEDVI 293
Query: 338 KG--IKIAGDVGDHPDDKF----NP----NALPVVNGITIKDVWGTKVQ-QSGLIQGLKN 386
+ + G DK+ NP + P I D+ +V +G + GL
Sbjct: 294 CPFILNLYYFCGPRGKDKYVWDKNPYPITDETPCFRRIHFSDITARQVHAAAGFLYGLAE 353
Query: 387 SPFTGICLSNINL 399
I SNI++
Sbjct: 354 QYIAEITFSNIDI 366
>gi|414864492|tpg|DAA43049.1| TPA: hypothetical protein ZEAMMB73_419161 [Zea mays]
Length = 205
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 90/163 (55%), Positives = 115/163 (70%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R +T++G VGDG+TLNT AF A+ + GG L VPPG +LTG FNLTS
Sbjct: 41 RKHVARVTEYGAVGDGRTLNTAAFARAVADLARRAPDGGAALVVPPGKWLTGPFNLTSCF 100
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TLYL +GA I A+QD +WPLIAPLPSYGRGR+ PG RY +FI G L DV+ITG+NGTI
Sbjct: 101 TLYLDEGAEILASQDMKHWPLIAPLPSYGRGRDEPGPRYSNFIGGSNLTDVIITGKNGTI 160
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSP 197
+GQG +WW+ + + L FTR +L+E + S +IIISNV F ++P
Sbjct: 161 NGQGQVWWDKFHAKELKFTRGHLLELLYSDNIIISNVTFVDAP 203
>gi|326797905|ref|YP_004315724.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326548669|gb|ADZ77054.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 485
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 124/404 (30%), Positives = 197/404 (48%), Gaps = 55/404 (13%)
Query: 41 ITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAK 100
ITDFG VGDG T NT+AF++AI + +GG + VP G +LTG L S++ L+LA
Sbjct: 70 ITDFGAVGDGLTKNTEAFKKAI---EACHNNGGGRVVVPYGKFLTGGIYLKSNVNLHLAD 126
Query: 101 GAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG-- 158
A I ++D+ ++P++ + R Y SFI+ G +++ +TG NG +DG
Sbjct: 127 SATIVFSRDSSDYPIV-----FTRWEGMECMNYASFIYAYGEENIAVTG-NGILDGNANN 180
Query: 159 AIWW-------------------------NMWRQRTLP---------FTRPNLIEFMNSR 184
WW M + P + RPN I+ +
Sbjct: 181 DYWWWWCGAKKYGWREELGKQTPARNALHEMMHEEVDPKKRIFGDGHYLRPNFIQPYQCK 240
Query: 185 SIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYIS 244
++ I++V NSP WN++PV C NV+I V ++ + PN DG DP++ NV I D Y
Sbjct: 241 NVWIADVKLINSPMWNLNPVLCENVLIEKVKVI--SHGPNNDGCDPEACKNVWIRDCYFD 298
Query: 245 TGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINL 304
TGDD +A+KSG DE G G P+ I G+ +GSE +GG +N+ A + +
Sbjct: 299 TGDDCIAIKSGRDEDGRNIGRPAENHIIENCVMKDGHGGVVIGSEIAGGAKNIYAINCEM 358
Query: 305 Y--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVV 362
N+ + +KT+ RGG I N+ + +V + ++ + P N +P +
Sbjct: 359 DSPNLDRVLRIKTSSSRGGIIENVFMKNVQVGTFKEAAVKCNMFYEKPG-----NHIPTI 413
Query: 363 NGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINLQGVAGP 405
I ++++ K Q L + + SP T + + N NL+G+ P
Sbjct: 414 RNIWVENLNVEKGGQYALMVAAYQQSPVTNLRMINCNLKGIKEP 457
>gi|300770984|ref|ZP_07080861.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33861]
gi|300762257|gb|EFK59076.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33861]
Length = 473
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 130/422 (30%), Positives = 201/422 (47%), Gaps = 66/422 (15%)
Query: 29 IVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSF 88
IV ++N +I DFG GDG T NT+AFR AI + GG + VP GV+LTG+
Sbjct: 46 IVRPTFKNKDYNIADFGAKGDGVTKNTEAFRLAI---EKCHAEGGGRVVVPNGVFLTGAI 102
Query: 89 NLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVIT 148
L S++ L+L G I ++D+ ++P++ + R Y SFI+ G +++ IT
Sbjct: 103 YLKSNVNLHLTDGTTILFSRDSSDYPIV-----FTRWEGMECMNYSSFIYAYGEENIAIT 157
Query: 149 GENGTIDG--QGAIWWNMW---------------------------------RQRTL--- 170
G+ GT+DG WW W +QR
Sbjct: 158 GK-GTLDGNSDNDNWW-WWCGARKYGWNESRSGEQKPARARLHTMMHQEVDAKQRVFGDG 215
Query: 171 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 230
+ RPN ++ N ++I+I ++ NSP WN++PV C NV I V +++ PN DG DP
Sbjct: 216 QYLRPNFVQPYNCKNILIEDIRMINSPMWNLNPVLCENVTIERVKVISHG--PNNDGCDP 273
Query: 231 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 290
++ NV I+D Y TGDD +A+KSG DE G G P+ I G+ +GSE
Sbjct: 274 EACKNVLIKDCYFDTGDDCIAIKSGRDEDGRNIGRPAENHIIENCIMKDGHGGVVIGSEI 333
Query: 291 SGGVENVLA--EHINLYNVGVGIHVKTNIGRGGFIRNITVSDV----YMENARKGIKIAG 344
+GG N+ A ++ N+ + +KT+ RGG I N+ + DV Y E A K
Sbjct: 334 AGGARNIYALNNKMDSPNLDRILRLKTSSSRGGIIENVFMKDVEVGTYKEAAVKFNMFYE 393
Query: 345 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQ-GLKNSPFTGICLSNINLQGVA 403
GDH +P + + ++++ K + L+ ++SP + N ++ GV
Sbjct: 394 KPGDH---------IPTIRNVWVENMHVKKGGRYALMSAAYESSPIKNFRMVNCDINGVK 444
Query: 404 GP 405
P
Sbjct: 445 EP 446
>gi|227537592|ref|ZP_03967641.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33300]
gi|227242594|gb|EEI92609.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33300]
Length = 473
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 130/423 (30%), Positives = 200/423 (47%), Gaps = 68/423 (16%)
Query: 29 IVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSF 88
IV ++N +I DFG GDG T NT+AFR AI + GG + VP GV+LTG+
Sbjct: 46 IVRPTFKNKDYNIADFGAKGDGVTKNTEAFRLAI---EKCHAEGGGRVVVPHGVFLTGAI 102
Query: 89 NLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVIT 148
L S++ L+L G I ++D+ ++P++ + R Y SFI+ G +++ IT
Sbjct: 103 YLKSNVNLHLTDGTTILFSRDSSDYPIV-----FTRWEGMECMNYSSFIYAYGEENIAIT 157
Query: 149 GENGTIDGQGA---IWWNMW---------------------------------RQRTL-- 170
G+ GT+DG WW W +QR
Sbjct: 158 GK-GTLDGNSDNDNWWW--WCGARKYGWNESRSGEQKPARARLHTMMHQEVDAKQRVFGD 214
Query: 171 -PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 229
+ RPN ++ N ++I+I ++ NSP WN++PV C NV I V +++ PN DG D
Sbjct: 215 GQYLRPNFVQPYNCKNILIEDIKMINSPMWNLNPVLCENVTIERVKVISHG--PNNDGCD 272
Query: 230 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 289
P++ NV I+D Y TGDD +A+KSG DE G G P+ I G+ +GSE
Sbjct: 273 PEACKNVLIKDCYFDTGDDCIAIKSGRDEDGRNIGRPAENHIIENCIMKDGHGGVVIGSE 332
Query: 290 TSGGVENVLA--EHINLYNVGVGIHVKTNIGRGGFIRNITVSDV----YMENARKGIKIA 343
+GG N+ A ++ N+ + +KT+ RGG I N+ + DV Y E A K
Sbjct: 333 IAGGARNIYALNNKMDSPNLDRILRLKTSSSRGGIIENVFMKDVEVGTYKEAAVKFNMFY 392
Query: 344 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQ-GLKNSPFTGICLSNINLQGV 402
GDH +P + + ++++ K + L+ ++SP + N + GV
Sbjct: 393 EKPGDH---------IPTIRNVWVENMHVKKGGKYALMSAAYESSPIKNFRMVNCEINGV 443
Query: 403 AGP 405
P
Sbjct: 444 KEP 446
>gi|413923569|gb|AFW63501.1| hypothetical protein ZEAMMB73_605801 [Zea mays]
Length = 313
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 116/331 (35%), Positives = 166/331 (50%), Gaps = 44/331 (13%)
Query: 109 DTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQR 168
D WPL+ LPSYG GRER G R+ S IHG L+DVVIT I A+ +++
Sbjct: 7 DEKYWPLMPALPSYGYGRERKGPRFGSLIHGQNLRDVVITAFEYIIHVLNAL--ALYQTL 64
Query: 169 TLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGI 228
+P +IHP + + + I + ++
Sbjct: 65 EVPV---------------------------DIHPFFYNILSILTLALVT---------- 87
Query: 229 DPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVG 287
DS +V IE+ YIS GDD +A+KSGWD+YGIAYG PSS I IR VT S S GI++G
Sbjct: 88 --DSCQDVLIENCYISVGDDAIAIKSGWDQYGIAYGRPSSDILIRNVTARSLVSAGISIG 145
Query: 288 SETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVG 347
SE SGGV NV E++ ++ G+ +KT GRGG+IRNI+ ++ +N R GI I D
Sbjct: 146 SEMSGGVANVTVENVRIWESRRGVRIKTATGRGGYIRNISYRNITFDNVRAGIVIKVDYN 205
Query: 348 DHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTS 407
+H DD ++ A P + I+ K + G V+ G P I ++++ G++
Sbjct: 206 EHADDGYDRTAFPDITSISFKGIHGQGVRVPVRAHGSDVIPIKDISFQDMSV-GISYKKK 264
Query: 408 PPLKCSDVSGSAYQ-VKPWPCSELSSSQQTG 437
+CS + G + V P PC L + G
Sbjct: 265 HIFQCSYLEGRVIRPVFPKPCENLDVYDEQG 295
>gi|336415217|ref|ZP_08595558.1| hypothetical protein HMPREF1017_02666 [Bacteroides ovatus
3_8_47FAA]
gi|335941250|gb|EGN03108.1| hypothetical protein HMPREF1017_02666 [Bacteroides ovatus
3_8_47FAA]
Length = 513
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 125/416 (30%), Positives = 194/416 (46%), Gaps = 62/416 (14%)
Query: 65 IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNW-PLIAPLPSYG 123
I+ GG +Y P GVYLT + ++ S++TLY+ GAV++ + ++ P +
Sbjct: 45 IEKASSEGGGTIYFPAGVYLTATIHMKSNITLYVESGAVLRFSDRFEDYLPFV------- 97
Query: 124 RGRERPGGRYMS----FIHGDGLQDVVITGENGTIDGQGAIWWN---------------- 163
+ R G M+ I+ +++ ITG GT++G G WW+
Sbjct: 98 --KIRWEGTVMNTLSPLIYAHDAENLTITGR-GTLNGNGFKWWSWEKETRELIKKNGGKL 154
Query: 164 --------MWRQRTLPFT--------------RPNLIEFMNSRSIIISNVIFQNSPFWNI 201
MW + RP I+F +++I NV NSPFW I
Sbjct: 155 PALNKLQRMWEEANEDLEISDYYKPSLERRMFRPPFIQFYECNNVLIENVKIVNSPFWTI 214
Query: 202 HPVYCSNVVIRYVTILAPADSP---NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDE 258
+P +C NV + VTI P+ P NTDGI+P S NV I D +IS GDD + +KSG D
Sbjct: 215 NPAFCDNVTVHGVTIYNPSKDPKGPNTDGINPSSCRNVRISDCFISVGDDCITIKSGRDA 274
Query: 259 YGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIG 318
G YG ITI S G+ +GSE SGGV V + GI +K++ G
Sbjct: 275 DGRKYGKACENITITNCVMLSGHGGVVIGSEMSGGVRRVTISNCVFDGTDSGIRLKSSRG 334
Query: 319 RGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQ 376
RGG + + V ++ M+N ++ I D+ + K P PV I + ++ G+ ++
Sbjct: 335 RGGVVEELRVDNIVMKNIQRNAFIF-DLFYDKESKVEPVSERTPVFRNIHLSNITGSDIK 393
Query: 377 QSGLIQGLKNSPFTGICLSNINLQGVAG---PTSPPLKCSDVSGSAYQVKPWPCSE 429
Q G I+G++ P G+ SNIN++ G + ++ +V S+ PW S+
Sbjct: 394 QIGYIKGIEEMPVQGLSFSNINMKAEVGFIIDIAEDIRFDNVDFSSQTGSPWQFSK 449
>gi|160885582|ref|ZP_02066585.1| hypothetical protein BACOVA_03584 [Bacteroides ovatus ATCC 8483]
gi|299147452|ref|ZP_07040517.1| polygalacturonase (Pectinase) [Bacteroides sp. 3_1_23]
gi|423290253|ref|ZP_17269102.1| hypothetical protein HMPREF1069_04145 [Bacteroides ovatus
CL02T12C04]
gi|423294451|ref|ZP_17272578.1| hypothetical protein HMPREF1070_01243 [Bacteroides ovatus
CL03T12C18]
gi|156109204|gb|EDO10949.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|298514730|gb|EFI38614.1| polygalacturonase (Pectinase) [Bacteroides sp. 3_1_23]
gi|392665640|gb|EIY59163.1| hypothetical protein HMPREF1069_04145 [Bacteroides ovatus
CL02T12C04]
gi|392675642|gb|EIY69083.1| hypothetical protein HMPREF1070_01243 [Bacteroides ovatus
CL03T12C18]
Length = 513
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 125/416 (30%), Positives = 194/416 (46%), Gaps = 62/416 (14%)
Query: 65 IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNW-PLIAPLPSYG 123
I+ GG +Y P GVYLT + ++ S++TLY+ GAV++ + ++ P +
Sbjct: 45 IEKASSEGGGTIYFPAGVYLTATIHMKSNITLYVESGAVLRFSDRFEDYLPFV------- 97
Query: 124 RGRERPGGRYMS----FIHGDGLQDVVITGENGTIDGQGAIWWN---------------- 163
+ R G M+ I+ +++ ITG GT++G G WW+
Sbjct: 98 --KIRWEGTVMNTLSPLIYAHDAENLTITGR-GTLNGNGFKWWSWEKETRELIKKNGGKL 154
Query: 164 --------MWRQRTLPFT--------------RPNLIEFMNSRSIIISNVIFQNSPFWNI 201
MW + RP I+F +++I NV NSPFW I
Sbjct: 155 PALNKLQRMWEEANEDLEISDYYKPSLERRMFRPPFIQFYECNNVLIENVKIVNSPFWTI 214
Query: 202 HPVYCSNVVIRYVTILAPADSP---NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDE 258
+P +C NV + VTI P+ P NTDGI+P S NV I D +IS GDD + +KSG D
Sbjct: 215 NPAFCDNVTVHGVTIYNPSKDPKGPNTDGINPSSCRNVRISDCFISVGDDCITIKSGRDA 274
Query: 259 YGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIG 318
G YG ITI S G+ +GSE SGGV V + GI +K++ G
Sbjct: 275 DGRKYGKACENITITNCVMLSGHGGVVIGSEMSGGVRRVTISNCVFDGTDSGIRLKSSRG 334
Query: 319 RGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQ 376
RGG + + V ++ M+N ++ I D+ + K P PV I + ++ G+ ++
Sbjct: 335 RGGVVEELRVDNIVMKNIQRNAFIF-DLFYDKESKVEPVSERTPVFRNIHLSNITGSDIK 393
Query: 377 QSGLIQGLKNSPFTGICLSNINLQGVAG---PTSPPLKCSDVSGSAYQVKPWPCSE 429
Q G I+G++ P G+ SNIN++ G + ++ +V S+ PW S+
Sbjct: 394 QIGYIKGIEEMPVQGLSFSNINMKAEVGFIVDIAEDIRFDNVDFSSQTGSPWQFSK 449
>gi|409100257|ref|ZP_11220281.1| glycoside hydrolase family protein [Pedobacter agri PB92]
Length = 557
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 133/472 (28%), Positives = 209/472 (44%), Gaps = 77/472 (16%)
Query: 1 MFRFLVTLSILLSYFNCFSLASVVTCSGIVP-MRYRNDKISITDFGGVGDGKTLNTKAFR 59
++R + L+ + + ++A T ++ + + D SI FG GDG ++NT++
Sbjct: 8 LYRSKIALACIFLFSAGAAMAQQKTSMPVIKQVNIKADTTSIVSFGAKGDGVSMNTESIN 67
Query: 60 EAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPL 119
+AI + + GG ++ +P G++LTG L S++ L+L + A+++ T D + L+
Sbjct: 68 KAIAAVS---QKGGGVVLIPGGLWLTGPIELKSNVNLHLKRDALLQFTDDFNQYKLVE-- 122
Query: 120 PSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIW------------WN---- 163
G +P R S I G LQ++ ITG +G IDG G W W
Sbjct: 123 ---GNWEGQPAWRNQSPISGTDLQNIAITG-SGIIDGNGGAWRMVKRDKLTESQWKKLTT 178
Query: 164 ----------MW--------------------------RQRTLPFTRPNLIEFMNSRSII 187
MW Q F RPNL+ N + I+
Sbjct: 179 SGGLVSEDGKMWYPSEKTFKGSKTKNAGVVAAGQSAADLQSIKDFLRPNLLVLTNCKQIL 238
Query: 188 ISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGD 247
+ V FQNSP WN+HP+ C ++ +R + + P + N DG+D +S NV IE S GD
Sbjct: 239 LEGVTFQNSPAWNLHPLLCEDLTLRNLQVKNPWFAQNGDGVDVESCKNVLIEGSTFDVGD 298
Query: 248 DLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNV 307
D + +KSG DE G G P+ + IR G VGSE SGG +N+ +
Sbjct: 299 DGICIKSGRDEAGRKRGKPTENVIIRNNVVYHAHGGFVVGSEMSGGAKNIWVYDCSFIGT 358
Query: 308 GVGIHVKTNIGRGGFIRNITVSDVYMEN-------------ARKGIKIAGDVGDHPDDKF 354
+GI KT GRGG + +I ++++ M + A I +AG+ +
Sbjct: 359 DIGIRFKTTRGRGGVVEDIYINNINMIDIPGEAILFDMYYAAVDPIVLAGEKREAIKTVV 418
Query: 355 NP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 404
P A P I IKDV +++ ++GL I L N+ +Q G
Sbjct: 419 VPVTEATPQFKNIYIKDVVANGAEKAIFVRGLPEMNIKDIYLENVTIQAKKG 470
>gi|298481339|ref|ZP_06999532.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298272543|gb|EFI14111.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 464
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 134/437 (30%), Positives = 198/437 (45%), Gaps = 59/437 (13%)
Query: 5 LVTLSILLSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYR 64
++ L L F CF +V+ R +++ + G +GKTLNTK I R
Sbjct: 9 IMNLRTTLFVFLCFCATTVL----------RAERVDMLKAGAKANGKTLNTKLINSTIDR 58
Query: 65 IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGR 124
L R GG L+ P G YLTGS +L S++TL L GA + + + ++ + G
Sbjct: 59 ---LNRGGGGTLFFPAGTYLTGSIHLKSNITLELEAGATLLFSDNFDDYLPFVEVRHEGV 115
Query: 125 GRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWW---------------------- 162
+ + I+ +++ I GE GT+DGQG WW
Sbjct: 116 MMKS----FQPLIYAVDAENITIKGE-GTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQ 170
Query: 163 NMWRQ----------------RTLP--FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPV 204
+MW TL F RP I+ + + + I V NSPFW ++P
Sbjct: 171 SMWDAANDTTAIYAETNKDYVNTLQRRFFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPE 230
Query: 205 YCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYG 264
+C NV I+ +TI A SPNTDG++P+S NV I D +IS GDD + +KSG D G
Sbjct: 231 FCDNVTIKGITI-DNAPSPNTDGVNPESCRNVHISDCHISVGDDCITIKSGRDAQARRLG 289
Query: 265 HPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 324
P ITI T S G+ +GSE SG V V + GI +K+ GRGG +
Sbjct: 290 VPCENITITNCTMLSGHGGVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVE 349
Query: 325 NITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGL 384
+I VS+V M N ++ + + P+ + I + T V+ I GL
Sbjct: 350 DIRVSNVVMSNIKQEAVVLNLKYSKMPAEPKSERTPIFRNVHISGMTVTNVKTPIKIVGL 409
Query: 385 KNSPFTGICLSNINLQG 401
+ +P + I L +I++QG
Sbjct: 410 EEAPISDIVLRDIHIQG 426
>gi|414873754|tpg|DAA52311.1| TPA: hypothetical protein ZEAMMB73_541408 [Zea mays]
Length = 253
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 94/212 (44%), Positives = 139/212 (65%), Gaps = 5/212 (2%)
Query: 230 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF-SGIAVGS 288
PDSS+NVCI Y+ G D++ +KSGWDEYGI++ PSS I+I +TG + SGIA GS
Sbjct: 10 PDSSTNVCINHCYVRNGGDVIVIKSGWDEYGISFAQPSSNISISDITGETRGGSGIAFGS 69
Query: 289 ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGD 348
E SGG+ V A + + N GI +KT GRGG++ N+ ++DV M+N I+I G+ G+
Sbjct: 70 EMSGGISEVRAVGLRIVNSLHGIRIKTAPGRGGYVENVYIADVSMDNVSMAIRITGNYGE 129
Query: 349 HPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSP 408
HPDDK++ ALPV++ ITIKDV G + +G+++G++ F+ ICLSN++L + ++
Sbjct: 130 HPDDKYDSTALPVISNITIKDVVGVNIGVAGILEGIQGDNFSNICLSNVSL---SVQSAH 186
Query: 409 PLKCSDVSGSAYQVKPWPCSEL-SSSQQTGAC 439
P CS + G + V P C +L S+ +QT C
Sbjct: 187 PWNCSLIEGYSNSVIPESCEQLRSNCRQTSIC 218
>gi|423215151|ref|ZP_17201679.1| hypothetical protein HMPREF1074_03211 [Bacteroides xylanisolvens
CL03T12C04]
gi|392692414|gb|EIY85652.1| hypothetical protein HMPREF1074_03211 [Bacteroides xylanisolvens
CL03T12C04]
Length = 513
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 125/416 (30%), Positives = 193/416 (46%), Gaps = 62/416 (14%)
Query: 65 IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNW-PLIAPLPSYG 123
I+ GG +Y P GVYLT + + +++TLY+ GAV++ + ++ P +
Sbjct: 45 IEKASSEGGGTIYFPAGVYLTATIYMKNNITLYVESGAVLRFSDRFEDYLPFV------- 97
Query: 124 RGRERPGGRYMS----FIHGDGLQDVVITGENGTIDGQGAIWWN---------------- 163
+ R G M+ I+ +++ ITG GT+DG G WW+
Sbjct: 98 --KIRWEGTVMNTLSPLIYAHDAENLTITGR-GTLDGNGFKWWSWEKETRELIKKNGGKL 154
Query: 164 --------MWRQRTLPFT--------------RPNLIEFMNSRSIIISNVIFQNSPFWNI 201
MW + RP I+F +++I NV NSPFW I
Sbjct: 155 PALNKLQRMWEEANEELEISDYYKPSLERRMFRPPFIQFYECNNVLIENVKIVNSPFWTI 214
Query: 202 HPVYCSNVVIRYVTILAPADSP---NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDE 258
+P +C NV + VTI P+ P NTDGI+P S NV I D +IS GDD + +KSG D
Sbjct: 215 NPAFCDNVTVHGVTIYNPSKDPKGPNTDGINPSSCRNVRISDCFISVGDDCITIKSGRDA 274
Query: 259 YGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIG 318
G YG ITI S G+ +GSE SGGV V + GI +K++ G
Sbjct: 275 DGRKYGKACENITITNCVMLSGHGGVVIGSEMSGGVRRVTISNCVFDGTDSGIRLKSSRG 334
Query: 319 RGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQ 376
RGG + + V ++ M+N ++ I D+ + K P PV I + ++ G+ ++
Sbjct: 335 RGGVVEELRVDNIVMKNIQRNAFIF-DLFYDKESKVEPVSERTPVFRNIHLSNITGSDIK 393
Query: 377 QSGLIQGLKNSPFTGICLSNINLQGVAG---PTSPPLKCSDVSGSAYQVKPWPCSE 429
Q G I+G++ P G+ SNIN++ G + ++ +V S+ PW S+
Sbjct: 394 QIGYIKGIEEMPVQGLSFSNINMKAEVGFIVDIAEDIRFDNVDFSSQTGSPWQFSK 449
>gi|284036172|ref|YP_003386102.1| glycoside hydrolase family protein [Spirosoma linguale DSM 74]
gi|283815465|gb|ADB37303.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
Length = 544
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 130/434 (29%), Positives = 194/434 (44%), Gaps = 72/434 (16%)
Query: 34 YRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSH 93
+R D I+I+ G V DG TLNT A +AI ++GG ++ VP G++LTG L S+
Sbjct: 34 FRKDTIAISKLGAVADGLTLNTAAINKAI---DQCTKAGGGVVLVPRGLWLTGPVTLKSN 90
Query: 94 MTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGT 153
+ L+LAKGA+++ T +PLI + G E R + I G GL+++ ITGE G
Sbjct: 91 VNLHLAKGALLQFTNRREVYPLIN---TTWEGEE--AIRNQAPISGVGLENIAITGE-GI 144
Query: 154 IDGQGAIWW---------NMWRQRTLP--------------------------------- 171
+DG G W + W++
Sbjct: 145 LDGAGEAWRMVKKGKLTSDQWKKLVASGGVLNDKQDTWYPTAQSLKGASEPVKAGQPMTY 204
Query: 172 ------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNT 225
F RPN++ + I++ V FQNSP W +HP+ C ++ +R VT P + N
Sbjct: 205 YEGIKDFLRPNMLSLTRCKRILLEGVTFQNSPAWCLHPLLCEDITLRRVTAKNPWYAQNG 264
Query: 226 DGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIA 285
DG+D +S N ++D GDD + +KSG DE G G P+ IT+R G
Sbjct: 265 DGLDLESCRNGLVDDCTFDVGDDGICIKSGRDEQGRKRGVPTENITVRNSRVYHAHGGFV 324
Query: 286 VGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN---------- 335
+GSE SGGV+N+ + VG+ KT GRGG + NI V + M +
Sbjct: 325 IGSEMSGGVKNLYVSNCTFMGTDVGLRFKTARGRGGVVENIFVDGIDMTDIAGEAILFDM 384
Query: 336 ---ARKGIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT 390
A+ + G+ + P + P A P I++V + + LI+GL
Sbjct: 385 YYAAKDPVPQQGESNELPVIQPQPLSEATPQFRSFQIRNVTCKGAETAILIRGLPEMAVK 444
Query: 391 GICLSNINLQGVAG 404
I + N LQ G
Sbjct: 445 DILIENAVLQSRKG 458
>gi|326799707|ref|YP_004317526.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326550471|gb|ADZ78856.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 517
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 121/395 (30%), Positives = 195/395 (49%), Gaps = 39/395 (9%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+++ DFG D L T A +EAI + ++GG +Y PPG YLTG +L S++TL++
Sbjct: 23 LNVLDFGAKNDSSALATTAIKEAIAKAS---QAGGGTIYFPPGTYLTGPIHLKSNITLFI 79
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
GA + + + ++ + P R + FI+ +++ ITG GT++G G
Sbjct: 80 EAGAELCFSDNFDHYLPMVP----SRWEGTMVTNFSPFIYAYEAENIRITGR-GTLNGNG 134
Query: 159 AIWW------------NMWRQR-----------TLP------FTRPNLIEFMNSRSIIIS 189
WW + W++ LP F RP I+ M +++ I
Sbjct: 135 KKWWAYSEVHVKNSPESKWQKEFHKLNKNVLHPDLPGWVERGFLRPPFIQPMYCKNVRID 194
Query: 190 NVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDL 249
+ +NSPFW ++P +C NV I VTI P SPNTDGI+P+S SNV I + +IS GDD
Sbjct: 195 GITIKNSPFWTVNPEFCDNVTIDGVTINNPP-SPNTDGINPESCSNVHISNCHISVGDDC 253
Query: 250 VAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGV 309
+ +KSG D G P+ TI T S G+ +GSE SG V+ ++ +
Sbjct: 254 ITIKSGKDRSGRKEARPAENYTITNCTMLSGHGGVVIGSEMSGDVKKIVISNCIFDGTDR 313
Query: 310 GIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKD 369
GI +KT GRGG + +I VS++ M+N ++ + D + P + I + +
Sbjct: 314 GIRIKTARGRGGVVEDIQVSNIVMKNIKQQAIVLDMQYAKTDREPVSERTPRFSNIHLSN 373
Query: 370 VWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 404
+ + +Q+G + GL+ P + SN+ ++ G
Sbjct: 374 ITA-QGEQAGYLNGLEEMPIENVSFSNMVMETKTG 407
>gi|224537997|ref|ZP_03678536.1| hypothetical protein BACCELL_02886 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520403|gb|EEF89508.1| hypothetical protein BACCELL_02886 [Bacteroides cellulosilyticus
DSM 14838]
Length = 452
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 140/452 (30%), Positives = 203/452 (44%), Gaps = 70/452 (15%)
Query: 10 ILLSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLR 69
ILL C +V+ R +++ + G DGKTLNTK I R L
Sbjct: 7 ILLCSLFCLCAVTVL----------RAERVDMLKAGAKVDGKTLNTKLINSTIDR---LN 53
Query: 70 RSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERP 129
+GG L+ P G YLTGS + SH+TL L GA + + ++ + G +
Sbjct: 54 ANGGGTLFFPAGTYLTGSIRMKSHITLELEAGATLLFSDSFDDYLPFVEVRHEGVMMKS- 112
Query: 130 GGRYMSFIHGDGLQDVVITGENGTIDGQGAIWW----------------------NMWRQ 167
+ I+ +++ I GE GT+DGQG WW MW Q
Sbjct: 113 ---FQPLIYAVDAENITIKGE-GTLDGQGKKWWMEFFRVMIDLRDNGMRNVNKYQTMWDQ 168
Query: 168 R----------------TLP--FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNV 209
TL F RP I+ + + + I V NSPFW ++P +C NV
Sbjct: 169 ANDTTAIYAETNKDYIGTLQRRFFRPPFIQPVRCKDVKIEGVKIVNSPFWTVNPEFCENV 228
Query: 210 VIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSG 269
++ VTI SPNTDGI+P+S NV I D +IS GDD + +KSG D G G P
Sbjct: 229 KVKGVTI-HNVPSPNTDGINPESCRNVHISDCHISVGDDCITIKSGRDAQGRRLGVPCEN 287
Query: 270 ITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVS 329
ITI S G+ +GSE SGGV V + GI +K+ GRGG + +I VS
Sbjct: 288 ITITNCIMLSGHGGVVIGSEMSGGVRKVTISNCIFDGTDRGIRLKSTRGRGGVVEDIRVS 347
Query: 330 DVYMENARK-----GIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGL 384
++ M N ++ +K +G + ++ P+ I I + T V+ I GL
Sbjct: 348 NIVMRNIKQEAVVLNLKYSGMPAEPKSER-----TPLFRNIHISGMTVTDVKTPVKIVGL 402
Query: 385 KNSPFTGICLSNINLQGVAGPTSPPLKCSDVS 416
+ +P + I L +I++QG AG C ++
Sbjct: 403 EEAPISEIVLRDIHVQG-AGEECVFEDCERIT 433
>gi|374324810|ref|YP_005077939.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus terrae HPL-003]
gi|357203819|gb|AET61716.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus terrae HPL-003]
Length = 476
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/373 (33%), Positives = 193/373 (51%), Gaps = 24/373 (6%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
+I D+G DG TL T A I+ +GG ++VP G YLTG+ L S++ L+L+
Sbjct: 28 NIVDYGAPQDGTTLATGA---IAAAIEAASNAGGGTVFVPSGTYLTGAIFLKSNIELHLS 84
Query: 100 KGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGA 159
GA++ + D ++P++ S G +R + S I+G L+++ +TG +GT+DG G
Sbjct: 85 PGAILSFSTDLVDYPVVE---SRWEGVQRE--VHASCIYGQNLENISVTG-SGTLDGNGQ 138
Query: 160 IWWNMWRQ--RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL 217
WW R+ L + RP LI F + + I +V+ +NSP W ++P+ C NV I V+IL
Sbjct: 139 PWWEKHRKHPEELQYPRPKLISFDRCQRVTIKDVMLKNSPSWTVNPIACYNVTIDNVSIL 198
Query: 218 APADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTG 277
P DSPNTDGI+P+S SNV I + I GDD +A+K+G ++ P ITI T
Sbjct: 199 NPTDSPNTDGINPESCSNVRISNCNIDVGDDCIAIKAGTED--TQERIPCENITITNCTM 256
Query: 278 SSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 337
+ +GSE SG + NV + GI +K+ GRGG + +I VS++ ME+
Sbjct: 257 VHGHGAVVLGSEMSGDIRNVTISNCVFKQTDRGIRLKSRRGRGGIVEDIRVSNIVMEDVI 316
Query: 338 KG--IKIAGDVGDHPDDKF----NP----NALPVVNGITIKDVWGTKVQ-QSGLIQGLKN 386
+ + G DK+ NP + P I D+ +V +G + GL
Sbjct: 317 CPFILNLYYFCGPRGKDKYVWDKNPYPITDETPCFRRIHFSDITARQVHAAAGFLYGLAE 376
Query: 387 SPFTGICLSNINL 399
I SNI++
Sbjct: 377 QYIAEITFSNIDI 389
>gi|310642874|ref|YP_003947632.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus polymyxa SC2]
gi|309247824|gb|ADO57391.1| Galacturan 1,4-alpha-galacturonidase [Paenibacillus polymyxa SC2]
gi|392303699|emb|CCI70062.1| Polygalacturonase PG [Paenibacillus polymyxa M1]
Length = 453
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/373 (33%), Positives = 195/373 (52%), Gaps = 24/373 (6%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
+I D+G V DG + T+A AI + +GG ++VP G YLTG+ L S++ L+++
Sbjct: 5 NIVDYGAVQDGTKMATEAIAAAIEAASN---AGGGTVFVPAGTYLTGAIFLKSNIELHVS 61
Query: 100 KGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGA 159
GA++ + + ++P++ S G +R + S I+G+ L+++ ITG +GT+DG G
Sbjct: 62 PGAILSFSTELADYPVVE---SRWEGVQRE--VHASCIYGENLENISITG-SGTLDGNGQ 115
Query: 160 IWWNMWRQ--RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL 217
WW R L + RP LI F + + I +V+ +NSP W ++P+ C NV I ++IL
Sbjct: 116 PWWEKHRNHPEELQYPRPKLISFDRCQRVTIKDVMLKNSPSWTVNPIACYNVTIDNLSIL 175
Query: 218 APADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTG 277
PADSPNTDGI+P+S SNV I + I GDD +A+K+G ++ P ITI T
Sbjct: 176 NPADSPNTDGINPESCSNVRISNCNIDVGDDCIAIKAGTED--TQERIPCENITITNCTM 233
Query: 278 SSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 337
+ +GSE SG + NV + GI +K+ GRGG I +I +S++ ME
Sbjct: 234 VHGHGAVVLGSEMSGDIRNVTISNCVFKQTDRGIRLKSRRGRGGIIEDIRISNIVMEEVI 293
Query: 338 KG--IKIAGDVGDHPDDKF----NP----NALPVVNGITIKDVWGTKVQ-QSGLIQGLKN 386
+ + G DK+ NP + P I D+ +V +G + GL
Sbjct: 294 CPFILNLYYFCGPRGKDKYVWDKNPYPITDETPCFRRIHFSDITARQVHAAAGFLYGLAE 353
Query: 387 SPFTGICLSNINL 399
I SNI++
Sbjct: 354 QYIAEITFSNIDI 366
>gi|294645183|ref|ZP_06722905.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294808093|ref|ZP_06766866.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|292639470|gb|EFF57766.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294444734|gb|EFG13428.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
Length = 455
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 134/436 (30%), Positives = 197/436 (45%), Gaps = 59/436 (13%)
Query: 6 VTLSILLSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRI 65
+ L L F CF +V+ R +++ + G +GKTLNTK I R
Sbjct: 1 MNLRTTLIVFLCFCATTVL----------RAERVDMLKAGAKANGKTLNTKLINSTIDR- 49
Query: 66 QHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRG 125
L R GG L+ P G YLTGS +L S++TL L GA + + + ++ + G
Sbjct: 50 --LNRGGGGTLFFPAGTYLTGSIHLKSNITLELEAGATLLFSDNFDDYLPFVEVRHEGVM 107
Query: 126 RERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWW----------------------N 163
+ + I+ +++ I GE GT+DGQG WW +
Sbjct: 108 MKS----FQPLIYAVDAENITIKGE-GTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQS 162
Query: 164 MWRQ----------------RTLP--FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVY 205
MW TL F RP I+ + + + I V NSPFW ++P +
Sbjct: 163 MWDAANDTTAIYAETNKDYVNTLQRRFFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEF 222
Query: 206 CSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH 265
C NV I+ +TI A SPNTDG++P+S NV I D +IS GDD + +KSG D G
Sbjct: 223 CDNVTIKGITI-DNAPSPNTDGVNPESCRNVHISDCHISVGDDCITIKSGRDAQARRLGV 281
Query: 266 PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRN 325
P ITI T S G+ +GSE SG V V + GI +K+ GRGG + +
Sbjct: 282 PCENITITNCTMLSGHGGVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVED 341
Query: 326 ITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLK 385
I VS+V M N ++ + + P+ + I + T V+ I GL+
Sbjct: 342 IRVSNVVMSNIKQEAVVLNLKYSKMPAEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLE 401
Query: 386 NSPFTGICLSNINLQG 401
+P + I L +I++QG
Sbjct: 402 EAPISDIVLRDIHIQG 417
>gi|375100956|ref|ZP_09747219.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661688|gb|EHR61566.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 557
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 128/412 (31%), Positives = 215/412 (52%), Gaps = 54/412 (13%)
Query: 29 IVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSF 88
+VP + + ++SITDFG G+ L+T AFR+AI + + +GG + +P G +LTG+
Sbjct: 63 VVPPDFPDFEVSITDFGADPTGEHLSTAAFRDAI---EEVSAAGGGRVVIPAGEFLTGAI 119
Query: 89 NLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPS-YGRGRERPGGRYMSFIHGDGLQDVVI 147
+L S++ L++ GAV++ +Q+ ++ LP+ Y R Y FI+ G+++V I
Sbjct: 120 HLRSNVELHVGSGAVVRFSQNPDHY-----LPAVYTRWEGVELYNYSPFIYARGVENVAI 174
Query: 148 TGENGTIDGQG--AIWWN------------MWR--QRTLPFT----------RPNLIEFM 181
TG +G +DGQ WWN ++R ++ +P RPN ++F
Sbjct: 175 TG-SGVLDGQADEKHWWNWSGSTQAEDRETLFRMGEQGVPVEQRRFGAGHHLRPNFVQFY 233
Query: 182 NSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDS 241
+SR+I++ V +NSP W IHPV N+ + V + +P + PN DG++P+SS +V I++S
Sbjct: 234 DSRNILVQGVTLKNSPMWMIHPVLSHNITVDGVVLDSP-EGPNNDGVNPESSRDVVIKNS 292
Query: 242 YISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEH 301
GDD +A+KSG + G G PS I I G+ +GSE SG V NV A+H
Sbjct: 293 RFDNGDDCIAIKSGRNADGRRIGVPSENILIENNHMQDGHGGVVMGSEMSGSVRNVFAQH 352
Query: 302 --INLYNVGVGIHVKTNIGRGGFIRNITVS-DVYMENARKGIKI-----AGDVGDHPDDK 353
++ N+ + +KTN RGG + N+ + +E + I++ D G H
Sbjct: 353 NVMDSPNLHRALRIKTNSVRGGIVENVYFRHNTVVEIGDEVIRVNFFYEEADSGPH---- 408
Query: 354 FNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGP 405
P+V I I+D+ + + ++G + SP + + +++ GV P
Sbjct: 409 -----TPIVRNIHIEDLRSDNGEYALYLRGYERSPVSNVTVTDSVFTGVEHP 455
>gi|299145498|ref|ZP_07038566.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|298515989|gb|EFI39870.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
Length = 450
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 134/438 (30%), Positives = 197/438 (44%), Gaps = 63/438 (14%)
Query: 6 VTLSILLSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRI 65
+ L L F CF +V+ R +++ + G +GKTLNTK I R
Sbjct: 1 MNLRTTLIVFLCFCATTVL----------RAERVDMLKAGAKANGKTLNTKLINSTIDR- 49
Query: 66 QHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRG 125
L R GG L+ P G YLTGS +L S++TL L GA + + + ++ + G
Sbjct: 50 --LNRGGGGTLFFPAGTYLTGSIHLKSNITLELEAGATLLFSDNFDDYLPFVEVRHEGVM 107
Query: 126 RERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWN---------------------- 163
+ + I+ +++ I GE GT+DGQG WW
Sbjct: 108 MKS----FQPLIYAVDTENITIKGE-GTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQP 162
Query: 164 MWR--------------------QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHP 203
MW QR F RP I+ + + + I V NSPFW ++P
Sbjct: 163 MWDAANDTTAIYAETNKDYVNTLQRR--FFRPPFIQPVRCKKVKIEGVKIINSPFWTVNP 220
Query: 204 VYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAY 263
+C+NV I+ +TI A SPNTDG++P+S NV I D +IS GDD + +KSG D
Sbjct: 221 EFCNNVTIKGITI-DNAPSPNTDGVNPESCRNVHISDCHISVGDDCITIKSGRDAQARRL 279
Query: 264 GHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFI 323
G P ITI T S G+ +GSE SG V V + GI +K+ GRGG +
Sbjct: 280 GVPCENITITNCTMLSGHGGVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVV 339
Query: 324 RNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQG 383
+I VS+V M N ++ + + P+ + I + T V+ I G
Sbjct: 340 EDIRVSNVVMSNIKQEAVVLNLKYSKMPAEPKSERTPIFRNVHISGMTVTNVKTPIKIVG 399
Query: 384 LKNSPFTGICLSNINLQG 401
L+ +P + I L +I++QG
Sbjct: 400 LEEAPISDIVLRDIHIQG 417
>gi|260642326|ref|ZP_05415427.2| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260622463|gb|EEX45334.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 456
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 134/449 (29%), Positives = 202/449 (44%), Gaps = 70/449 (15%)
Query: 1 MFRFLVTLSIL-----LSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNT 55
M ++ + +SI+ L F CF +V+ R +++ + G +GKTLNT
Sbjct: 1 MIKYNLIISIMNLRTTLIVFLCFCATTVL----------RAERVDMLKAGAKANGKTLNT 50
Query: 56 KAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPL 115
K I R L R GG L+ P G YLTGS +L S++TL L GA + + + ++
Sbjct: 51 KLINSTIDR---LNRGGGGTLFFPAGTYLTGSIHLKSNITLELEAGATLLFSDNFDDYLP 107
Query: 116 IAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWW------------- 162
+ G + + I+ +++ I GE GT+DGQG WW
Sbjct: 108 FVEVRHEGVMMKS----FQPLIYAVDAENITIKGE-GTLDGQGKKWWMEFFRVMIDLKDN 162
Query: 163 ------------------------------NMWRQRTLPFTRPNLIEFMNSRSIIISNVI 192
N ++R F RP I+ + + + I V
Sbjct: 163 GMRDVNKYQPLWDAANDTTAIYAETNKDYVNTLQRR---FFRPPFIQPVRCKKVKIEGVK 219
Query: 193 FQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAV 252
NSPFW ++P +C NV I+ +TI A SPNTDG++P+S NV I D +IS GDD + +
Sbjct: 220 IINSPFWTVNPEFCDNVTIKGITI-DNAPSPNTDGVNPESCRNVHISDCHISVGDDCITI 278
Query: 253 KSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 312
KSG D G P ITI T S G+ +GSE SG V V + GI
Sbjct: 279 KSGRDAQARRLGVPCENITITNCTMLSGHGGVVIGSEMSGSVRKVTISNCVFDGTDRGIR 338
Query: 313 VKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWG 372
+K+ GRGG + +I VS+V M N ++ + + P+ + I +
Sbjct: 339 IKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMPAEPKSERTPIFRNVHISGMTV 398
Query: 373 TKVQQSGLIQGLKNSPFTGICLSNINLQG 401
T V+ I GL+ +P + I L +I++QG
Sbjct: 399 TNVKTPIKIVGLEEAPISDIVLRDIHIQG 427
>gi|320107891|ref|YP_004183481.1| glycoside hydrolase family protein [Terriglobus saanensis SP1PR4]
gi|319926412|gb|ADV83487.1| glycoside hydrolase family 28 [Terriglobus saanensis SP1PR4]
Length = 408
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 127/391 (32%), Positives = 193/391 (49%), Gaps = 42/391 (10%)
Query: 44 FGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAV 103
+G GDG T +T A ++AI GGT++ ++T L S M + G
Sbjct: 31 YGARGDGATKDTVAIQKAI---DACAGKGGTVVIGGSSKFITAPLTLKSKMIFRVEAGTT 87
Query: 104 IKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWN 163
++A+ D ++P +GR + + +D+ ITG G IDG+G WW
Sbjct: 88 LEASTDHNDFPEKEEFKDHGR---------QAMLTAKAAEDITITG-GGVIDGRGESWWP 137
Query: 164 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 223
Q LP RP LI F + + I + N+ QNS W I P Y ++V R + +LAP S
Sbjct: 138 ---QPNLP--RPRLIVFDHCKHIRMENITAQNSAMWQIVPYYSDDLVFRNMKVLAPQTSH 192
Query: 224 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVT-GSSPF- 281
NTDGIDP +S+ + I+ YI TGDD VA+KSG G P + R +T F
Sbjct: 193 NTDGIDPFASTKIVIDHVYIDTGDDNVAIKSGQP------GSPGPDLPSRDITITDCEFL 246
Query: 282 --SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG 339
G+++GSE +GGV+NV AE I+ GI VK+N RG I N D+ MEN +
Sbjct: 247 HGHGLSIGSEIAGGVQNVRAERIHFKGTDQGIRVKSNRDRGNDIGNFVFRDITMENVKTA 306
Query: 340 I-------KIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGI 392
I KI + + P + P+ + ITI++V + + +I GL SP +
Sbjct: 307 ILLSEFYPKIPDTITEEPVTRLTPH----FHDITIENVQAVGSRDAAVIVGLPESPIRNL 362
Query: 393 CLSNINLQGVAGPTSPPLKCSDVSGSAYQVK 423
L+N+++ + G T ++ +D+ + + VK
Sbjct: 363 KLTNVHISAIHGAT---IQYTDLVATDFVVK 390
>gi|237720811|ref|ZP_04551292.1| polygalacturonase [Bacteroides sp. 2_2_4]
gi|229449646|gb|EEO55437.1| polygalacturonase [Bacteroides sp. 2_2_4]
Length = 455
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 134/438 (30%), Positives = 196/438 (44%), Gaps = 63/438 (14%)
Query: 6 VTLSILLSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRI 65
+ L L F CF +V+ R +++ + G +GKTLNTK I R
Sbjct: 1 MNLRTTLFVFLCFCATTVL----------RAERVDMLKAGAKANGKTLNTKLINSTIDR- 49
Query: 66 QHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRG 125
L R GG L+ P G YLTGS +L S++TL L GA + + + ++ + G
Sbjct: 50 --LNRGGGGTLFFPAGTYLTGSIHLKSNITLELEAGATLLFSDNFDDYLPFVEVRHEGVM 107
Query: 126 RERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWN---------------------- 163
+ + I+ +++ I GE GT+DGQG WW
Sbjct: 108 MKS----FQPLIYAVDAENITIKGE-GTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQP 162
Query: 164 MWR--------------------QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHP 203
MW QR F RP I+ + + + I V NSPFW ++P
Sbjct: 163 MWDAANDTTAIYAETNKDYVNTLQRR--FFRPPFIQPVRCKKVKIEGVKIINSPFWTVNP 220
Query: 204 VYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAY 263
+C NV I+ +TI A SPNTDG++P+S NV I D +IS GDD + +KSG D
Sbjct: 221 EFCDNVTIKGITI-DNAPSPNTDGVNPESCRNVHISDCHISVGDDCITIKSGRDAQARRL 279
Query: 264 GHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFI 323
G P ITI T S G+ +GSE SG V V + GI +K+ GRGG +
Sbjct: 280 GVPCENITITNCTMLSGHGGVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVV 339
Query: 324 RNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQG 383
+I VS+V M N ++ + + P+ + I + T V+ I G
Sbjct: 340 EDIRVSNVVMSNIKQEAVVLNLKYSKMPAEPKSERTPIFRNVHISGMTVTNVKTPIKIVG 399
Query: 384 LKNSPFTGICLSNINLQG 401
L+ +P + I L +I++QG
Sbjct: 400 LEEAPISDIVLRDIHIQG 417
>gi|399024363|ref|ZP_10726403.1| endopolygalacturonase [Chryseobacterium sp. CF314]
gi|398080600|gb|EJL71406.1| endopolygalacturonase [Chryseobacterium sp. CF314]
Length = 467
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 131/423 (30%), Positives = 207/423 (48%), Gaps = 68/423 (16%)
Query: 29 IVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSF 88
IV +R +TDFG +GDGKT NT AF++AI + GG + VP G++LTG+
Sbjct: 41 IVKPNFRKKDYLVTDFGAIGDGKTKNTGAFKKAI---EKCNVEGGGRVVVPKGIFLTGAI 97
Query: 89 NLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVIT 148
L S++ L++++GA I +QD+ ++P++ + R Y S I+ +++ IT
Sbjct: 98 YLKSNVDLHISEGATILFSQDSNDYPIV-----FTRWEGMECMNYSSLIYAHEEENIAIT 152
Query: 149 GENGTIDGQGA-----IW-------WNMWR----------------QRTLP--------- 171
G+ GT+DG W WN R Q+ P
Sbjct: 153 GK-GTLDGNSDNDHWWFWCGAKKYGWNESRPGRQNPARAKLHEYMAQKKDPRERIFGDGY 211
Query: 172 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 231
+ RPN ++ S++ +++V+ +NSP WN++PV C NV+I V +++ PN DG DP+
Sbjct: 212 YLRPNFVQPYKSKNFYMADVLVKNSPMWNLNPVLCENVLIERVKVIS--HGPNNDGFDPE 269
Query: 232 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 291
+ NV I+DSY TGDD +A+KSG DE G G P+ I G+ +GSE +
Sbjct: 270 ACKNVWIKDSYFDTGDDCIAIKSGRDEDGRGIGKPAENHIIENCEMKDGHGGVVIGSEIA 329
Query: 292 GGVENVLA--EHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDH 349
GG +N+ A ++ N+ + +KT+ RGG I N V+ N + G V
Sbjct: 330 GGAKNIYAIGNVMDSKNLERALRIKTSSNRGGIIEN-----VFFYNTKVGAYKEAAV--- 381
Query: 350 PDDKFNPNALPVVNGI-TIKDVW--GTKVQQSG----LIQGLKNSPFTGICLSNINLQGV 402
+FN + N I TI+++W V++ G L ++SP T + N + V
Sbjct: 382 ---RFNMHYEKPGNFIPTIRNIWVENLTVEKGGKYAILSDAYESSPVTDFTMVNAKINNV 438
Query: 403 AGP 405
P
Sbjct: 439 EIP 441
>gi|423298602|ref|ZP_17276658.1| hypothetical protein HMPREF1070_05323 [Bacteroides ovatus
CL03T12C18]
gi|392662345|gb|EIY55906.1| hypothetical protein HMPREF1070_05323 [Bacteroides ovatus
CL03T12C18]
Length = 446
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 132/439 (30%), Positives = 196/439 (44%), Gaps = 65/439 (14%)
Query: 6 VTLSILLSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRI 65
+ L L F CF +V+ R +++ + G +GKTLNTK I R
Sbjct: 1 MNLRTTLIVFLCFCATTVL----------RAERVDMLKAGAKANGKTLNTKLINSTIDR- 49
Query: 66 QHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRG 125
L R GG L+ P G YLTGS +L S++TL L GA + + + ++ + G
Sbjct: 50 --LNRGGGGTLFFPAGTYLTGSIHLKSNITLELEAGATLLFSDNFDDYLPFVEVRHEGVM 107
Query: 126 RERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWW----------------------- 162
+ + I+ +++ I GE GT+DGQG WW
Sbjct: 108 MKS----FQPLIYAVDAENITIKGE-GTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQP 162
Query: 163 --------------------NMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIH 202
N ++R F RP I+ + + + I V NSPFW ++
Sbjct: 163 LWDAANDTTAIYAETNKDYVNTLQRR---FFRPPFIQPVRCKKVKIEGVKIINSPFWTVN 219
Query: 203 PVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA 262
P +C NV I+ +TI A SPNTDG++P+S NV I D +IS GDD + +KSG D
Sbjct: 220 PEFCDNVTIKGITI-DNAPSPNTDGVNPESCRNVHISDCHISVGDDCITIKSGRDAQARR 278
Query: 263 YGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGF 322
G P ITI T S G+ +GSE SG V V + GI +K+ GRGG
Sbjct: 279 LGVPCENITITNCTMLSGHGGVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGV 338
Query: 323 IRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQ 382
+ +I VS+V M N ++ + + P+ + I + T V+ I
Sbjct: 339 VEDIRVSNVVMSNIKQEAVVLNLKYSKMPAEPKSERTPIFRNVHISGMTVTNVKTPIKIV 398
Query: 383 GLKNSPFTGICLSNINLQG 401
GL+ +P + I L +I++QG
Sbjct: 399 GLEEAPISDIVLRDIHIQG 417
>gi|253573347|ref|ZP_04850690.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. oral taxon
786 str. D14]
gi|251846875|gb|EES74880.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. oral taxon
786 str. D14]
Length = 442
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 105/268 (39%), Positives = 155/268 (57%), Gaps = 10/268 (3%)
Query: 70 RSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERP 129
+GG + VP G ++TG+ L SH+ L L+ GAV+ + + ++P++ S G +R
Sbjct: 32 EAGGGTVVVPAGTFVTGAIFLKSHIELRLSPGAVLSFSTNPDDYPVVK---SRWEGVQRE 88
Query: 130 GGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQR--TLPFTRPNLIEFMNSRSII 187
+ S I+G+ L++V +TG +G I+G G WW R R L + RP LI F R +
Sbjct: 89 --VHASCIYGEDLENVTVTG-SGCINGNGQPWWEKQRNRPEELHYPRPKLISFDRCRRVT 145
Query: 188 ISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGD 247
I +V +SP W ++P+ C NV I V+IL PADSPNTDGI+P+S SNV I + +I GD
Sbjct: 146 IRDVSLVDSPSWTVNPIRCHNVTIDNVSILNPADSPNTDGINPESCSNVRISNCHIDVGD 205
Query: 248 DLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNV 307
D +A+K+G +E A P ITI T G+ +GSE SG + NV + +
Sbjct: 206 DCIAIKAGTEE--TAERVPCENITITNCTMIHGHGGVVIGSEMSGNIRNVTISNCVFQHT 263
Query: 308 GVGIHVKTNIGRGGFIRNITVSDVYMEN 335
GI +K+ GRGG + +I VS++ MEN
Sbjct: 264 DRGIRLKSRRGRGGIVEDIRVSNLVMEN 291
>gi|448373202|ref|ZP_21557548.1| glycoside hydrolase family 28 [Natrialba aegyptia DSM 13077]
gi|445644701|gb|ELY97713.1| glycoside hydrolase family 28 [Natrialba aegyptia DSM 13077]
Length = 544
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 127/396 (32%), Positives = 183/396 (46%), Gaps = 45/396 (11%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+ I +FG NT+A + A+ +GGT+ VPPG Y+TG + TL
Sbjct: 30 RYDIREFGAQSGSDDSNTEAIQTAL---DECAGTGGTV-SVPPGTYVTGPLRVGDRTTLQ 85
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
L GA ++ D +P + S G ++ G + + DG V ITG GTIDG
Sbjct: 86 LEAGATLRFVGDYEAFPTVK---SRWEGWDQVG--FHPCLLVDGADTVSITGR-GTIDGN 139
Query: 158 GAIWWNMW--RQRTLP----------------------FT-RPNLIEFMNSRSIIISNVI 192
G WW + + TLP FT RP L++ ++ ++ +S V
Sbjct: 140 GEYWWQFYGEPESTLPDGLQDRLAEFEAQNDKQDDVSSFTHRPPLLQVFDAENVTVSGVT 199
Query: 193 FQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAV 252
+NSPFWN H VY NV I V I PAD+PN DGID DSS V I D+YI+ GDD + +
Sbjct: 200 LRNSPFWNTHVVYSENVTITDVNIENPADAPNGDGIDIDSSRYVRISDAYINAGDDAICI 259
Query: 253 KSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 312
KSG D G G P+S IT+ T + G+ +GSE SG V +V + + GI
Sbjct: 260 KSGKDAEGREVGEPASQITVTNCTVEAGHGGVVIGSEMSGDVRDVTVTNCTFTDTDRGIR 319
Query: 313 VKTNIGRGGFIRNITVSDVYMENARKGIKIAG------DVGDHPDDKFNPNALPVVNGIT 366
+KT GRGG + ++ + M I G D P D+ P+V ++
Sbjct: 320 IKTQRGRGGVVEDLRFDQIVMRRIACPFVINGYYFTPLDSDPEPIDE----GTPLVRNVS 375
Query: 367 IKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 402
++ V+ +G GL F GI ++ +
Sbjct: 376 FSNITARNVETAGFFAGLPERYFEGISFRDVRIDAT 411
>gi|384047530|ref|YP_005495547.1| glycoside hydrolase Family 28 [Bacillus megaterium WSH-002]
gi|345445221|gb|AEN90238.1| Glycoside Hydrolase Family 28 [Bacillus megaterium WSH-002]
Length = 465
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 145/451 (32%), Positives = 220/451 (48%), Gaps = 68/451 (15%)
Query: 4 FLVTLSILLSYF---NCFSLASVVTC--SGIVPMRYRNDKISITDFGGVGDGKTLNTKAF 58
F++TL ++L + S + +T I P + N +I +G GDGK+ +T AF
Sbjct: 9 FVMTLMLVLPFSAQGEALSASEKITAVKEQIQPPSFPNRTFNIKRYGAAGDGKSDSTAAF 68
Query: 59 REAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAP 118
++AI + ++GG + VPPG+Y+TG+ L S++ L++ K A IK +Q+ + L A
Sbjct: 69 KKAI---EAANKAGGGRVVVPPGIYVTGAIYLKSNVNLHVMKKATIKFSQNPDKY-LPAV 124
Query: 119 LPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG--AIWW-------------- 162
L + G E Y I+ +++ ITGE GT+DGQG WW
Sbjct: 125 LTRW-EGVEL--YNYSPLIYAYNEKNIAITGE-GTLDGQGDNEHWWPWKGKKEFGWKEGE 180
Query: 163 -NMWRQRTLPFT-------------------RPNLIEFMNSRSIIISNVIFQNSPFWNIH 202
N + R L F RP+ I+ +S++I+I V NSP W I+
Sbjct: 181 PNQQQDRDLLFKMAEEKVPVKERVFGKGHYLRPSFIQPYHSKNIMIKGVTILNSPMWQIN 240
Query: 203 PVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA 262
PV N++I V I+ PN DG+DP+SS NV I+DSY GDD +A+KSG + G
Sbjct: 241 PVLSENILIDDVKII--GHGPNNDGVDPESSKNVLIKDSYFDNGDDCIAIKSGRNADGRR 298
Query: 263 YGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEH--INLYNVGVGIHVKTNIGRG 320
PS I I G+ +GSE SG V NV A+H ++ N+ + +KTN RG
Sbjct: 299 INVPSENIIIEGNEMKDGHGGVVIGSEISGSVRNVFAQHNVMDSPNLDRALRIKTNSVRG 358
Query: 321 GFIRNITVSDVYMENA-RKGIKI-----AGDVGDHPDDKFNPNALPVVNGITIKDVWGTK 374
G I +I S+ +++ + I+I GD G N PVV I I+++
Sbjct: 359 GTIEDIDFSNNTVKSVGSEVIQIDMYYEEGDTG---------NFTPVVRNINIENLQSNG 409
Query: 375 VQQSGLIQGLKNSPFTGICLSNINLQGVAGP 405
+ I+ + SP T + + + N Q VA P
Sbjct: 410 GKYGLWIRAYERSPVTNLTIRHSNFQHVATP 440
>gi|336402515|ref|ZP_08583249.1| hypothetical protein HMPREF0127_00562 [Bacteroides sp. 1_1_30]
gi|335948128|gb|EGN09853.1| hypothetical protein HMPREF0127_00562 [Bacteroides sp. 1_1_30]
Length = 455
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 134/436 (30%), Positives = 196/436 (44%), Gaps = 59/436 (13%)
Query: 6 VTLSILLSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRI 65
+ L L F CF +V+ R +++ + G +GKTLNTK I R
Sbjct: 1 MNLRTTLFVFLCFCATTVL----------RAERVDMLKAGAKANGKTLNTKLINSTIDR- 49
Query: 66 QHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRG 125
L R GG L+ P G YLTGS +L S++TL L GA + + + ++ + G
Sbjct: 50 --LNRGGGGTLFFPAGTYLTGSIHLKSNITLELEAGATLLFSDNFDDYLPFVEVRHEGVM 107
Query: 126 RERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWN---------------------- 163
+ + I+ +++ I GE GT+DGQG WW
Sbjct: 108 MKS----FQPLIYAVDAENITIKGE-GTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQP 162
Query: 164 MWRQ----------------RTLP--FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVY 205
MW TL F RP I+ + + + I V NSPFW ++P +
Sbjct: 163 MWDAANDTTAIYAETNKDYVNTLQRRFFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEF 222
Query: 206 CSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH 265
C NV I+ +TI A SPNTDG++P+S NV I D +IS GDD + +KSG D G
Sbjct: 223 CDNVTIKGITI-DNAPSPNTDGVNPESCRNVHISDCHISVGDDCITIKSGRDAQARRLGV 281
Query: 266 PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRN 325
P ITI T S G+ +GSE SG V V + GI +K+ GRGG + +
Sbjct: 282 PCENITITNCTMLSGHGGVVIGSEMSGSVCKVTISNCVFDGTDRGIRIKSTRGRGGVVED 341
Query: 326 ITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLK 385
I VS+V M N ++ + + P+ + I + T V+ I GL+
Sbjct: 342 IRVSNVVMSNIKQEAVVLNLKYSKMPAEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLE 401
Query: 386 NSPFTGICLSNINLQG 401
+P + I L +I++QG
Sbjct: 402 EAPISDIVLRDIHIQG 417
>gi|423213419|ref|ZP_17199948.1| hypothetical protein HMPREF1074_01480 [Bacteroides xylanisolvens
CL03T12C04]
gi|392693879|gb|EIY87109.1| hypothetical protein HMPREF1074_01480 [Bacteroides xylanisolvens
CL03T12C04]
Length = 450
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 133/437 (30%), Positives = 196/437 (44%), Gaps = 63/437 (14%)
Query: 6 VTLSILLSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRI 65
+ L L F CF +V+ R +++ + G +GKTLNTK I R
Sbjct: 1 MNLRTTLIVFLCFCATTVL----------RAERVDMLKAGAKANGKTLNTKLINSTIDR- 49
Query: 66 QHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRG 125
L R GG L+ P G+YLTGS +L S++TL L GA + + + ++ + G
Sbjct: 50 --LNRGGGGTLFFPAGIYLTGSIHLKSNITLELEAGATLLFSDNFDDYLPFVEVRHEGVM 107
Query: 126 RERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWN---------------------- 163
+ + I+ +++ I GE GT+DGQG WW
Sbjct: 108 MKS----FQPLIYAVDAENITIKGE-GTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQP 162
Query: 164 MWR--------------------QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHP 203
MW QR F RP I+ + + + I V NSPFW ++P
Sbjct: 163 MWDAANDTTAIYAETNKDYVNTLQRR--FFRPPFIQPVRCKKVKIEGVKIINSPFWTVNP 220
Query: 204 VYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAY 263
+C NV I+ +TI A SPNTDG++P+S NV I D +IS GDD + +KSG D
Sbjct: 221 EFCDNVTIKGITI-DNAPSPNTDGVNPESCRNVHISDCHISVGDDCITIKSGRDAQARRL 279
Query: 264 GHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFI 323
G P ITI T S G+ +GSE SG V V + GI +K+ GRGG +
Sbjct: 280 GVPCENITITNCTMLSGHGGVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVV 339
Query: 324 RNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQG 383
+I VS+V M N ++ + + P+ + I + T V+ I G
Sbjct: 340 EDIRVSNVVMSNIKQEAVVLNLKYSKMPAEPKSERTPIFRNVHISGMTVTNVKTPIKIVG 399
Query: 384 LKNSPFTGICLSNINLQ 400
L+ +P + I L +I++Q
Sbjct: 400 LEEAPISDIVLRDIHIQ 416
>gi|160886115|ref|ZP_02067118.1| hypothetical protein BACOVA_04122 [Bacteroides ovatus ATCC 8483]
gi|156108928|gb|EDO10673.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
Length = 459
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 133/436 (30%), Positives = 197/436 (45%), Gaps = 59/436 (13%)
Query: 5 LVTLSILLSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYR 64
++ L L F CF +V+ R +++ + G +GKTLNTK I R
Sbjct: 9 IMNLRTTLFVFLCFCATTVL----------RAERVDMLKAGAKANGKTLNTKLINSTIDR 58
Query: 65 IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGR 124
L R GG L+ P G YLTGS +L S++TL L GA + + + ++ + G
Sbjct: 59 ---LNRGGGGTLFFPAGTYLTGSIHLKSNITLELEAGATLLFSDNFDDYLPFVEVRHEGV 115
Query: 125 GRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWW---------------------- 162
+ + I+ +++ I GE GT+DGQG WW
Sbjct: 116 MMKS----FQPLIYAVDAENITIKGE-GTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQ 170
Query: 163 NMWRQ----------------RTLP--FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPV 204
+MW TL F RP I+ + + + I V NSPFW ++P
Sbjct: 171 SMWDAANDTTAIYAETNKDYVNTLQRRFFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPE 230
Query: 205 YCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYG 264
+C NV I+ +TI A SPNTDG++P+S NV I D +IS GDD + +KSG D G
Sbjct: 231 FCDNVTIKGITI-DNAPSPNTDGVNPESCRNVHISDCHISVGDDCITIKSGRDAQARRLG 289
Query: 265 HPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 324
P ITI T S G+ +GSE SG V V + GI +K+ GRGG +
Sbjct: 290 VPCENITITNCTMLSGHGGVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVE 349
Query: 325 NITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGL 384
+I VS+V M N ++ + + P+ + I + T V+ I GL
Sbjct: 350 DIRVSNVVMSNIKQEAVVLNLKYSKMPVEPKSERTPIFRNVHISGMTVTNVKTPIKIVGL 409
Query: 385 KNSPFTGICLSNINLQ 400
+ +P + I L +I++Q
Sbjct: 410 EEAPISDIVLRDIHIQ 425
>gi|423299813|ref|ZP_17277838.1| hypothetical protein HMPREF1057_00979 [Bacteroides finegoldii
CL09T03C10]
gi|408473622|gb|EKJ92144.1| hypothetical protein HMPREF1057_00979 [Bacteroides finegoldii
CL09T03C10]
Length = 450
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 135/439 (30%), Positives = 196/439 (44%), Gaps = 65/439 (14%)
Query: 6 VTLSILLSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRI 65
+ L L F CF +V+ R +++ + G +GK LNTK I R
Sbjct: 1 MNLRTTLLVFLCFCATTVL----------RAERVDMLKAGAKANGKALNTKLINSTIDR- 49
Query: 66 QHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRG 125
L R GG L+ P G YLTGS +L S++TL L GA + + + ++ + G
Sbjct: 50 --LNRGGGGTLFFPAGTYLTGSIHLKSNITLELEAGATLLFSDNFDDYLPFVEVRHEGVM 107
Query: 126 RERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWN---------------------- 163
+ + I+ +++ I GE GT+DGQG WW
Sbjct: 108 MKS----FQPLIYAVDAENITIKGE-GTLDGQGKKWWMEFFRVMIDLKDNGMRDINKYQP 162
Query: 164 MWR--------------------QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHP 203
MW QR F RP I+ + + I I V NSPFW ++P
Sbjct: 163 MWDAANDTTAIYAETNKDYVSTLQRR--FFRPPFIQPIRCKEIKIEGVKIVNSPFWTVNP 220
Query: 204 VYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAY 263
+C NV I+ +TI SPNTDGI+P+S NV I D +IS GDD + +KSG D
Sbjct: 221 EFCDNVTIKGITI-DNVPSPNTDGINPESCRNVHISDCHISVGDDCITIKSGRDAQARRL 279
Query: 264 GHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFI 323
G P ITI T S G+ +GSE SG V V + GI +K+ GRGG +
Sbjct: 280 GVPCENITITNCTMLSGHGGVVIGSEMSGSVRKVTISNCIFDGTDRGIRIKSTRGRGGVV 339
Query: 324 RNITVSDVYMEN-ARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQ 382
+I VS++ M N R+ + + P + P+ + I + T V+ I
Sbjct: 340 EDIRVSNIVMSNIKREAVVLNLKYSKMPAEP-KSERTPIFRNVHISGMTVTDVKTPIKIV 398
Query: 383 GLKNSPFTGICLSNINLQG 401
GL+ +P + I L +I++QG
Sbjct: 399 GLEEAPISDIVLRDIHIQG 417
>gi|374376182|ref|ZP_09633840.1| Exo-poly-alpha-galacturonosidase [Niabella soli DSM 19437]
gi|373233022|gb|EHP52817.1| Exo-poly-alpha-galacturonosidase [Niabella soli DSM 19437]
Length = 547
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 139/471 (29%), Positives = 206/471 (43%), Gaps = 77/471 (16%)
Query: 1 MFRFLVTLSILLSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFRE 60
M ++ + +LL+ N S A V + ++ IT FG V DG TLNTK+ +
Sbjct: 1 MLKYCLFSFLLLTALNARSQA-VWKLPEVAQTKFSGSVYPITKFGAVPDGYTLNTKSIQA 59
Query: 61 AIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLP 120
AI GG ++ VPPG++LTG L S++ L LA GA + T+D +PL+
Sbjct: 60 AI---DACTAKGGGVVAVPPGLWLTGPLTLKSNVNLNLAAGATLLFTKDKTQYPLV---K 113
Query: 121 SYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIW---------WNMWR----- 166
+ G E+ R S I ++ ITG NG IDG G W + W+
Sbjct: 114 ANWEGFEQM--RNQSPISAKNAVNIAITG-NGIIDGNGDAWRMVKKDKLTESQWKNLVAS 170
Query: 167 --------------------------------------QRTLPFTRPNLIEFMNSRSIII 188
Q F RPNL+ + +++
Sbjct: 171 GGVLAEGGKTWMPSESYAKGNAMKDPGRLSPDKDAAFYQSVKDFFRPNLVVLTSCDKVLL 230
Query: 189 SNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDD 248
V FQNSP W +HP+ N+ +R V + P + N DGID +S SNV IE+S GDD
Sbjct: 231 EGVTFQNSPAWCLHPLMSKNITVRNVFVKNPWYAQNGDGIDLESCSNVLIENSKFDVGDD 290
Query: 249 LVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVG 308
+ +KSG D G P+ + IR T + G VGSE SGGV NV +
Sbjct: 291 GLCMKSGRDADGRKRAMPTKDVIIRGCTVYAAHGGFVVGSEMSGGVNNVYVSNCTFIGSD 350
Query: 309 VGIHVKTNIGRGGFIRNITVSDVYMEN-------------ARKGIKIAGDVGDHPD-DKF 354
+G+ KT GRGG + NI + D++M++ A+ I +AG+ + P +K
Sbjct: 351 IGLRFKTTRGRGGIVENIFIKDIFMKDIPGDAVLFDMYYMAKDPIALAGEKRELPKVEKL 410
Query: 355 NPN-ALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 404
+ P I I +++ Q++ ++GL I +SN Q G
Sbjct: 411 AVDETTPQFRNIQISNIYVNGAQRAVFLRGLPEMAVKNISISNAVFQSKQG 461
>gi|262408002|ref|ZP_06084550.1| polygalacturonase [Bacteroides sp. 2_1_22]
gi|293369111|ref|ZP_06615706.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|336416263|ref|ZP_08596599.1| hypothetical protein HMPREF1017_03707 [Bacteroides ovatus
3_8_47FAA]
gi|345511524|ref|ZP_08791064.1| polygalacturonase [Bacteroides sp. D1]
gi|423286902|ref|ZP_17265753.1| hypothetical protein HMPREF1069_00796 [Bacteroides ovatus
CL02T12C04]
gi|262354810|gb|EEZ03902.1| polygalacturonase [Bacteroides sp. 2_1_22]
gi|292635823|gb|EFF54320.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|335938994|gb|EGN00873.1| hypothetical protein HMPREF1017_03707 [Bacteroides ovatus
3_8_47FAA]
gi|345454069|gb|EEO49839.2| polygalacturonase [Bacteroides sp. D1]
gi|392674440|gb|EIY67888.1| hypothetical protein HMPREF1069_00796 [Bacteroides ovatus
CL02T12C04]
Length = 450
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 133/435 (30%), Positives = 196/435 (45%), Gaps = 59/435 (13%)
Query: 6 VTLSILLSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRI 65
+ L L F CF +V+ R +++ + G +GKTLNTK I R
Sbjct: 1 MNLRTTLFVFLCFCATTVL----------RAERVDMLKAGAKANGKTLNTKLINSTIDR- 49
Query: 66 QHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRG 125
L R GG L+ P G YLTGS +L S++TL L GA + + + ++ + G
Sbjct: 50 --LNRGGGGTLFFPAGTYLTGSIHLKSNITLELEAGATLLFSDNFDDYLPFVEVRHEGVM 107
Query: 126 RERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWW----------------------N 163
+ + I+ +++ I GE GT+DGQG WW +
Sbjct: 108 MKS----FQPLIYAVDAENITIKGE-GTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQS 162
Query: 164 MWRQ----------------RTLP--FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVY 205
MW TL F RP I+ + + + I V NSPFW ++P +
Sbjct: 163 MWDAANDTTAIYAETNKDYVNTLQRRFFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEF 222
Query: 206 CSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH 265
C NV I+ +TI A SPNTDG++P+S NV I D +IS GDD + +KSG D G
Sbjct: 223 CDNVTIKGITI-DNAPSPNTDGVNPESCRNVHISDCHISVGDDCITIKSGRDAQARRLGV 281
Query: 266 PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRN 325
P ITI T S G+ +GSE SG V V + GI +K+ GRGG + +
Sbjct: 282 PCENITITNCTMLSGHGGVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVED 341
Query: 326 ITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLK 385
I VS+V M N ++ + + P+ + I + T V+ I GL+
Sbjct: 342 IRVSNVVMSNIKQEAVVLNLKYSKMPVEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLE 401
Query: 386 NSPFTGICLSNINLQ 400
+P + I L +I++Q
Sbjct: 402 EAPISDIVLRDIHIQ 416
>gi|379723469|ref|YP_005315600.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
3016]
gi|386726203|ref|YP_006192529.1| glycoside hydrolase [Paenibacillus mucilaginosus K02]
gi|378572141|gb|AFC32451.1| glycoside hydrolase family 28 [Paenibacillus mucilaginosus 3016]
gi|384093328|gb|AFH64764.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
K02]
Length = 530
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/463 (27%), Positives = 198/463 (42%), Gaps = 81/463 (17%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
S+TD+G VGDG T NT+AF +AI ++GG + +P GV+LTG +L S + L+
Sbjct: 28 FSVTDYGAVGDGVTDNTEAFHKAIAACS---QAGGGRVVIPAGVWLTGPLSLASRLDLHA 84
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITG--------- 149
GA++ ++ ++P+I + + +P R S + G+GL+ V ITG
Sbjct: 85 QAGALVLFSRRFEDYPMI-----FSQYEGQPSIRCQSPLDGEGLEHVAITGAGVFDGGGD 139
Query: 150 --------------------ENGTIDGQGAIWW-------------NMWRQ-RTLP---- 171
G +D +WW + R+ T P
Sbjct: 140 AWRPVKDWKMTEKHWAKLIASGGVVDEDAGMWWPSEAAMNGPAKVAQLKREGSTDPKDYE 199
Query: 172 ----FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDG 227
+ RPNL+ + +++ FQNSP WN+HP C +V +R VT+ P N DG
Sbjct: 200 AARDYLRPNLLSLRRCKYVLLEGATFQNSPAWNLHPWACEHVTLRGVTVRNPWYGQNGDG 259
Query: 228 IDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVG 287
+D DS +ED GDD + +KSG DE G A G P I IR G +G
Sbjct: 260 LDLDSCRYGLVEDCSFDVGDDAICIKSGKDEAGRALGIPCEDILIRNCRVYHGHGGFVIG 319
Query: 288 SETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN------------ 335
SE SGGV + E +G+ K+ GRGG + +I + + M +
Sbjct: 320 SEMSGGVRRLRVEDCTFMGTDIGLRFKSTRGRGGLVEDIEIERIRMNSIVGEAISFHLFY 379
Query: 336 -ARKGIKIAGDVGDHPDDKFNPNAL--PVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGI 392
++G +AG + P ++ P+ GITI+DV + + LI GL P G+
Sbjct: 380 EGKEGSGVAG-------ENIVPVSVETPIFRGITIRDVQCAGAETALLINGLPEMPLDGL 432
Query: 393 CLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQ 435
+ N G + + V+ P L +Q
Sbjct: 433 VVENFTASAKRGGVCTNAQNLTLKDVTLHVEQGPVVSLRHAQH 475
>gi|337750378|ref|YP_004644540.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
KNP414]
gi|336301567|gb|AEI44670.1| glycoside hydrolase family 28 [Paenibacillus mucilaginosus KNP414]
Length = 530
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 134/467 (28%), Positives = 201/467 (43%), Gaps = 89/467 (19%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
S+TD+G VGDG T NT+AF +AI ++GG + +P GV+LTG +L S + L+
Sbjct: 28 FSVTDYGAVGDGVTDNTEAFHKAIAACS---QAGGGRVVIPAGVWLTGPLSLASRLDLHA 84
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
GA++ ++ ++P+I + + +P R S + G+GL+ V ITG G DG G
Sbjct: 85 QAGALVLFSRRFEDYPMI-----FSQYEGQPSIRCQSPLDGEGLEHVAITG-AGVFDGGG 138
Query: 159 AIW-----WNMWRQR---------------------------------------TLP--- 171
W W M + T P
Sbjct: 139 DAWRPVKDWKMTEKHWAKLIASGGVVDEAAGMWWPSEAAMNGPAKVAQLKREGSTDPKDY 198
Query: 172 -----FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 226
+ RPNL+ + +++ FQNSP WN+HP C +V +R VT+ P N D
Sbjct: 199 EAARDYLRPNLLSLRRCKYVLLEGATFQNSPAWNLHPWACEHVTLRGVTVRNPWYGQNGD 258
Query: 227 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 286
G+D DS +ED GDD + +KSG DE G G P I IR G +
Sbjct: 259 GLDLDSCRYGLVEDCSFDVGDDAICIKSGKDEAGRELGIPCEDILIRNCRVYHGHGGFVI 318
Query: 287 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN----------- 335
GSE SGGV + E +G+ K+ GRGG + +I + + M +
Sbjct: 319 GSEMSGGVRRLRVEDCTFMGTDIGLRFKSTRGRGGLVEDIEIERIRMNSIVGEAISFHLF 378
Query: 336 --ARKGIKIAGDVGDHPDDKFNPNAL--PVVNGITIKDVWGTKVQQSGLIQGLKNSPFTG 391
++G +AG + P ++ P+ GITI+DV + + LI GL P G
Sbjct: 379 YEGKEGSGVAG-------ENIVPVSVETPIFRGITIRDVQCAGAETALLINGLPEMPLDG 431
Query: 392 ICLSNINL---QGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQ 435
+ + N +GV + L DV+ V+ P L +Q
Sbjct: 432 LVVENFTASAKRGVVCTNAQNLTLKDVT---LHVEQGPVVSLRHAQH 475
>gi|29346428|ref|NP_809931.1| polygalacturonase (Pectinase) [Bacteroides thetaiotaomicron
VPI-5482]
gi|29338324|gb|AAO76125.1| polygalacturonase (Pectinase) [Bacteroides thetaiotaomicron
VPI-5482]
Length = 445
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 131/436 (30%), Positives = 195/436 (44%), Gaps = 59/436 (13%)
Query: 6 VTLSILLSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRI 65
+ L I L F C +++ R +++ + G +GK LNTK I R
Sbjct: 1 MNLRITLLAFLCLCATAIL----------RAERVDMLKAGAKANGKALNTKLINSTIDR- 49
Query: 66 QHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRG 125
L R GG L+ P G YLTGS +L S++TL L GA + + + ++ + G
Sbjct: 50 --LNRGGGGTLFFPAGTYLTGSIHLKSNITLELEAGATLLFSDNFDDYLPFVEVRHEGVM 107
Query: 126 RERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWN---------------------- 163
+ + I+ +++ I GE GT+DGQG WW
Sbjct: 108 MKS----FQPLIYAVDAENITIKGE-GTLDGQGKKWWMEFFRVMIDLKDNGMRDINKYQP 162
Query: 164 MWRQR----------------TLP--FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVY 205
MW + TL F RP I+ + + + I V NSPFW ++P +
Sbjct: 163 MWDAQNDTTAIYAETNKDYVSTLQRRFFRPPFIQPVRCKKVKIEGVKIVNSPFWTVNPEF 222
Query: 206 CSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH 265
C NV I+ +TI SPNTDGI+P+S NV I D +IS GDD + +KSG D G
Sbjct: 223 CDNVTIKGITI-NNVPSPNTDGINPESCRNVHISDCHISVGDDCITIKSGRDAQARRLGV 281
Query: 266 PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRN 325
P ITI T S G+ +GSE SG V V + GI +K+ GRGG + +
Sbjct: 282 PCENITITNCTMLSGHGGVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVED 341
Query: 326 ITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLK 385
I VS++ M N ++ + + P+ + I + T V+ I GL+
Sbjct: 342 IRVSNIVMSNIKQEAVVLNLKYSQMPAEAKSERTPIFRNVHISGMTVTDVKTPIKIVGLE 401
Query: 386 NSPFTGICLSNINLQG 401
+P + I L +I++QG
Sbjct: 402 EAPISDIVLRDIHIQG 417
>gi|325106419|ref|YP_004276073.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975267|gb|ADY54251.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 554
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 133/457 (29%), Positives = 201/457 (43%), Gaps = 87/457 (19%)
Query: 34 YRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSH 93
+ ++K+ ITDFGG+GDG LNT+AF +AI L GG +L VP G++LTG S+
Sbjct: 42 FPDNKVKITDFGGIGDGIYLNTQAFSKAI---DALSAKGGGMLTVPAGIWLTGPIQFKSN 98
Query: 94 MTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGT 153
+ L+L A+I + D +P++ S+ R R S I G L ++ ITG +G
Sbjct: 99 INLHLEDRAIILFSPDKNLYPIVET--SFEGLDTR---RCQSPIWGKNLTNIAITG-SGA 152
Query: 154 IDGQGAIWWNMWRQRT---------------------LP--------------------- 171
IDG G W + +Q+ +P
Sbjct: 153 IDGNGQFWRPLKKQKVTESFWKKTVSGGGVFKRSDYWMPSAQYLHGDTISDMNVPRHFKT 212
Query: 172 ---------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS 222
F RP ++ F +++ + VIFQNSP WNIHP+ C NV+I + + P+ +
Sbjct: 213 DEEWQSVRDFLRPVMVSFRECKNVYLQGVIFQNSPAWNIHPLMCENVIIDGIQVRNPSYA 272
Query: 223 PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS 282
N DG+D +S NV + +S GDD + +KSG +E G G P + + T
Sbjct: 273 QNGDGLDLESCKNVIVVNSSFDVGDDGICLKSGKNEDGRKRGMPCENVIVDNCTVFKGHG 332
Query: 283 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM--------- 333
G VGSE SGGV N+ + VG+ K+N GRGG + NI +S++ M
Sbjct: 333 GFVVGSEMSGGVRNISVTNCQFLGTDVGLRFKSNRGRGGVVENIFISNISMIDIATEPLH 392
Query: 334 -----------ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQ 382
E G KI P D+ P ITIK+V+ ++ ++
Sbjct: 393 FNLYYGGKSAVEELEDGTKIVRQEKLPPVDE----TTPTFKNITIKNVYCSEANKAMYFY 448
Query: 383 GLKNSPFTGICLSNINL---QGVAGPTSPPLKCSDVS 416
GL + + N + QG S + D++
Sbjct: 449 GLPEHNIKNLQIENFVVHSNQGADIQESENISLKDIT 485
>gi|383113004|ref|ZP_09933785.1| hypothetical protein BSGG_0152 [Bacteroides sp. D2]
gi|382948911|gb|EFS29452.2| hypothetical protein BSGG_0152 [Bacteroides sp. D2]
Length = 444
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/429 (30%), Positives = 193/429 (44%), Gaps = 63/429 (14%)
Query: 15 FNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGT 74
F CF +++ R +++ + G +GK LNTK I R L R GG
Sbjct: 10 FLCFCATTIL----------RAERVDMLKTGAKANGKALNTKLINSTIDR---LNRGGGG 56
Query: 75 LLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYM 134
L+ P G YLTGS +L S++TL L GA + + + ++ + G + +
Sbjct: 57 TLFFPAGTYLTGSIHLKSNITLELEAGATLLFSDNFDDYLPFVEVRHEGVMMKS----FQ 112
Query: 135 SFIHGDGLQDVVITGENGTIDGQGAIWWN----------------------MWR------ 166
I+ +++ I GE GT+DGQG WW MW
Sbjct: 113 PLIYAVDAENITIKGE-GTLDGQGKKWWMEFFRVMIDLKDNGMRDINKYQPMWDAANDTT 171
Query: 167 --------------QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIR 212
QR F RP I+ + + + I V NSPFW ++P +C NV+I+
Sbjct: 172 AIYAETNKDYVTTLQRR--FFRPLFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVIIK 229
Query: 213 YVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITI 272
+TI A SPNTDG++P+S NV I D +IS GDD + +KSG D G P ITI
Sbjct: 230 GITI-DNAPSPNTDGVNPESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITI 288
Query: 273 RRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVY 332
T S G+ +GSE SG V V + GI +K+ GRGG + +I VS+V
Sbjct: 289 TNCTMLSGHGGVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVV 348
Query: 333 MENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGI 392
M N ++ + + P+ + I + T V+ I GL+ +P + I
Sbjct: 349 MSNIKQEAVVLNLKYSKMPAEPKSERTPIFRNVHISGMTVTDVKTPIKIVGLEEAPISDI 408
Query: 393 CLSNINLQG 401
L +I++QG
Sbjct: 409 VLRDIHIQG 417
>gi|257869845|ref|ZP_05649498.1| galacturan 1,4-alpha-galacturonidase [Enterococcus gallinarum EG2]
gi|257804009|gb|EEV32831.1| galacturan 1,4-alpha-galacturonidase [Enterococcus gallinarum EG2]
Length = 437
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/286 (37%), Positives = 157/286 (54%), Gaps = 11/286 (3%)
Query: 53 LNTKAFREAIY-RIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTW 111
LN K+ I I L ++GG L GVY TGS L S++ L+L GAV++ + D
Sbjct: 11 LNEKSVTATIQGYIDQLHQAGGGRLMFASGVYPTGSLMLKSNVELHLQPGAVLRFSDDPK 70
Query: 112 NWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQ--RT 169
+P++ S G +R Y S I+ DG +++ ITG GTIDGQG WW+++R
Sbjct: 71 EYPVVV---SRWEGVKRE--VYASCIYADGAENIAITG-FGTIDGQGQKWWDVFRNHPEQ 124
Query: 170 LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 229
L + RP LI F + + I + +V NSP W ++P+ C ++ + + I PADSPNTDGID
Sbjct: 125 LEYPRPKLISFDSCQQITLRDVSLVNSPSWTVNPILCQDITVDNIKIKNPADSPNTDGID 184
Query: 230 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 289
P+S NV I + I GDD +A+KSG +E ITI G+ +GSE
Sbjct: 185 PESCKNVRISNCLIDVGDDCIAIKSGTEETKERVS--CENITISNCQMLHGHGGVVLGSE 242
Query: 290 TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 335
SG + NV + + GI +K+ GRGG I +I V+++ M+N
Sbjct: 243 MSGDIRNVTISNCIFQDTDRGIRLKSRRGRGGIIEDIRVNNLIMDN 288
>gi|268317938|ref|YP_003291657.1| glycoside hydrolase [Rhodothermus marinus DSM 4252]
gi|345304218|ref|YP_004826120.1| polygalacturonase [Rhodothermus marinus SG0.5JP17-172]
gi|262335472|gb|ACY49269.1| glycoside hydrolase family 28 [Rhodothermus marinus DSM 4252]
gi|345113451|gb|AEN74283.1| Polygalacturonase [Rhodothermus marinus SG0.5JP17-172]
Length = 470
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 137/419 (32%), Positives = 198/419 (47%), Gaps = 65/419 (15%)
Query: 29 IVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSF 88
I P + +T +G VGDG+T T AFR+AI + R+GG + VP G +LTG
Sbjct: 47 IRPPVFPERDFVLTRYGAVGDGRTDCTDAFRQAI---EACHRAGGGRVVVPRGTFLTGPI 103
Query: 89 NLTSHMTLYLAKGAVIKATQDTWNWPLIAPLP-SYGRGRERPGGRYMSFIHGDGLQDVVI 147
+L S++ L+L GA ++ QD A LP + R G Y FI+ G ++V I
Sbjct: 104 HLASNVNLHLDDGATVRFKQDP-----AAYLPVVFTRWEGVEGMNYSPFIYAFGQENVAI 158
Query: 148 TGENGTIDGQGAI--WWNM-------WR------------------------QRTL---P 171
TG +G +DGQ WW WR QR L
Sbjct: 159 TG-SGVLDGQADENHWWPWKGRKEYGWREGMPTQDEARRRLFEMAEAGVPPEQRILGEGS 217
Query: 172 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 231
+ RPN I+F R+++I V NSP W IHPV C NV +R VT+ + PN DG +P+
Sbjct: 218 YLRPNFIQFYRCRNVLIEGVTIVNSPMWEIHPVLCENVTVRGVTVR--SHGPNNDGCNPE 275
Query: 232 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 291
S V IED TGDD +A+KSG + G PS+ I IR G+ +GSE S
Sbjct: 276 SCRYVLIEDCLFDTGDDCIAIKSGRNADGRRVNVPSAYIVIRNCKMRDGHGGVVIGSEIS 335
Query: 292 GGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYM-ENARKGIKI-----A 343
GG ++ AE + N+ + +KTN RGG I +I + +V + + A I++
Sbjct: 336 GGAHHIYAERCEMSSPNLDRALRIKTNSVRGGLIEHIYMREVEVGQVADAVIRVNFYYEE 395
Query: 344 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 402
GD G P D P+V I ++++ + + ++G SP + L + GV
Sbjct: 396 GDAG--PFD-------PIVRHIEVRNLTSRQSPYALYLRGYARSPIRDVRLIDCTFDGV 445
>gi|448360766|ref|ZP_21549393.1| glycoside hydrolase family 28 [Natrialba asiatica DSM 12278]
gi|445652552|gb|ELZ05438.1| glycoside hydrolase family 28 [Natrialba asiatica DSM 12278]
Length = 522
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 126/396 (31%), Positives = 183/396 (46%), Gaps = 45/396 (11%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+ I +FG NT+A + A+ +GGT+ VPPG Y+TG + TL+
Sbjct: 8 RYDIREFGAQSGSDDSNTEAIQTAL---DECAGTGGTV-SVPPGTYVTGPLRVGDRTTLH 63
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
L GA ++ D +P + S G ++ G + + DG V ITG GTIDG
Sbjct: 64 LEAGATLRFVGDYEAFPTVK---SRWEGWDQVG--FHPCLLVDGADTVSITG-RGTIDGN 117
Query: 158 GAIWWNMW--RQRTLP----------------------FT-RPNLIEFMNSRSIIISNVI 192
G WW + + TLP FT RP L++ ++ ++ +S V
Sbjct: 118 GEYWWQFYGEPESTLPDGLQDRLAEFEAQNDKQDDVSSFTHRPPLLQVFDAENVTVSGVT 177
Query: 193 FQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAV 252
+NSPFWN H VY NV I V I PA +PN DGID DSS V I D+YI+ GDD + +
Sbjct: 178 LRNSPFWNTHVVYSENVTITDVNIENPAGAPNGDGIDIDSSRYVRISDAYINAGDDAICI 237
Query: 253 KSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 312
KSG D G G P+S IT+ T + G+ +GSE SG V +V + + GI
Sbjct: 238 KSGKDAEGREVGEPASQITVTNCTVEAGHGGVVIGSEMSGDVRDVTVTNCTFTDTDRGIR 297
Query: 313 VKTNIGRGGFIRNITVSDVYMENARKGIKIAG------DVGDHPDDKFNPNALPVVNGIT 366
+KT GRGG + ++ + M I G D P D+ P+V ++
Sbjct: 298 IKTQRGRGGVVEDLRFDQIVMRRIACPFVINGYYFTPLDSDPEPIDE----GTPLVRNVS 353
Query: 367 IKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 402
++ V+ +G GL F GI ++ +
Sbjct: 354 FSNITARNVETAGFFAGLPERYFEGISFRDVRIDAT 389
>gi|357051036|ref|ZP_09112232.1| hypothetical protein HMPREF9478_02215 [Enterococcus saccharolyticus
30_1]
gi|355380661|gb|EHG27797.1| hypothetical protein HMPREF9478_02215 [Enterococcus saccharolyticus
30_1]
Length = 437
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/286 (37%), Positives = 157/286 (54%), Gaps = 11/286 (3%)
Query: 53 LNTKAFREAIY-RIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTW 111
LN K+ I I L ++GG L GVY TGS L S++ L+L GAV++ + D
Sbjct: 11 LNEKSVTATIQGYIDQLHQAGGGRLMFASGVYPTGSLMLKSNVELHLQPGAVLRFSDDPK 70
Query: 112 NWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQ--RT 169
+P++ S G +R Y S I+ DG +++ ITG GTIDGQG WW+++R
Sbjct: 71 EYPVVV---SRWEGVKRE--VYASCIYADGAENIAITG-FGTIDGQGQKWWDVFRNHPEQ 124
Query: 170 LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 229
L + RP LI F + + I + +V NSP W ++P+ C ++ + + I PADSPNTDGID
Sbjct: 125 LEYPRPKLISFDSCQQITLRDVSLVNSPSWTVNPILCQDITVDNIKIKNPADSPNTDGID 184
Query: 230 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 289
P+S NV I + I GDD +A+KSG +E ITI G+ +GSE
Sbjct: 185 PESCKNVRISNCLIDVGDDCIAIKSGTEETKERVS--CENITISNCQMLHGHGGVVLGSE 242
Query: 290 TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 335
SG + NV + + GI +K+ GRGG I +I V+++ M+N
Sbjct: 243 MSGDIRNVTISNCIFQDTDRGIRLKSRRGRGGVIEDIRVNNLIMDN 288
>gi|431050714|ref|ZP_19493383.1| polygalacturonase [Enterococcus faecium E1590]
gi|431764029|ref|ZP_19552575.1| polygalacturonase [Enterococcus faecium E3548]
gi|430560252|gb|ELA99556.1| polygalacturonase [Enterococcus faecium E1590]
gi|430621333|gb|ELB58100.1| polygalacturonase [Enterococcus faecium E3548]
Length = 445
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 163/298 (54%), Gaps = 17/298 (5%)
Query: 41 ITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAK 100
I FG D LNT+A ++AI +GG + VP G +LTG+ L S++ L+L+
Sbjct: 4 ILTFGASID--ELNTEAIQKAI---DAAASAGGGTVVVPAGEFLTGALFLKSNVELHLSA 58
Query: 101 GAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAI 160
GAV+K + D ++P++ S G R Y S I+ ++++ +TG GT+DG G
Sbjct: 59 GAVLKFSDDPKDYPIVH---SRWEGVHRK--VYASCIYAQNVENISVTG-FGTLDGNGKK 112
Query: 161 WWNMWRQR--TLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILA 218
WW+ +R L + RP L+ F N I + ++ SP W I+P+ CSN +TIL
Sbjct: 113 WWHTFRNEPDNLAYPRPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILN 172
Query: 219 PADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH-PSSGITIRRVTG 277
PADSPNTDGIDP+S NV I + +I GDD +A+K+G ++ Y ITI T
Sbjct: 173 PADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTED---TYERIACENITITNCTM 229
Query: 278 SSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 335
G+ +GSE SG + N+ + GI +K+ GRGG + +I VS++ M+N
Sbjct: 230 VHGHGGVVLGSEMSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDN 287
>gi|393781526|ref|ZP_10369720.1| hypothetical protein HMPREF1071_00588 [Bacteroides salyersiae
CL02T12C01]
gi|392676130|gb|EIY69568.1| hypothetical protein HMPREF1071_00588 [Bacteroides salyersiae
CL02T12C01]
Length = 447
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 136/434 (31%), Positives = 199/434 (45%), Gaps = 64/434 (14%)
Query: 9 SILLSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHL 68
+IL S F CF +A + + +++ + G DGKTLNT + R L
Sbjct: 6 TILFSVF-CFGMA----------ITLKAERVDMLKSGAKADGKTLNTTLINHTVDR---L 51
Query: 69 RRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRER 128
++GG L+ P G YLTG+ L S++TL L GA + + + ++ LP E
Sbjct: 52 SQAGGGTLFFPAGTYLTGAIRLKSNITLELEAGATLLFSDNFDDY-----LPFMEVRHEG 106
Query: 129 PGGRYMS-FIHGDGLQDVVITGENGTIDGQGAIWWN----------------------MW 165
+ S I +++ I GE GT+DGQG WW +W
Sbjct: 107 VMMKSFSPLISAMDAENITIKGE-GTLDGQGKAWWTEFFRIYVDLEKNGMRELNKYQPLW 165
Query: 166 RQR----------------TLP--FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCS 207
+ TL F RP I+ + R + I V NSPFW ++P +C
Sbjct: 166 ERENDVEALYAETNEDWHGTLKRRFFRPPFIQPVRCRRVRIEGVKIINSPFWTVNPEFCD 225
Query: 208 NVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPS 267
NVV+ VTI SPNTDGI+P+S NV I D +IS GDD + +KSG D G P
Sbjct: 226 NVVVTGVTI-HNVPSPNTDGINPESCRNVHISDCHISVGDDCITLKSGRDAQARRLGVPC 284
Query: 268 SGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 327
ITI T S G+ +GSE SG V V + GI +K+ GRGG + +I
Sbjct: 285 ENITITNCTMLSGHGGVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIR 344
Query: 328 VSDVYMEN-ARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 386
VS++ M N R+ + + + P + + P+ I+I + V+ I GL+
Sbjct: 345 VSNIIMSNIKREAVVLNLKYSEMPVEPMSERT-PLFRDISISGLTAVGVKTPVKIVGLEE 403
Query: 387 SPFTGICLSNINLQ 400
+P T I L +IN++
Sbjct: 404 APVTDIILRDINVK 417
>gi|383122658|ref|ZP_09943350.1| hypothetical protein BSIG_0597 [Bacteroides sp. 1_1_6]
gi|251842244|gb|EES70324.1| hypothetical protein BSIG_0597 [Bacteroides sp. 1_1_6]
Length = 445
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 131/436 (30%), Positives = 194/436 (44%), Gaps = 59/436 (13%)
Query: 6 VTLSILLSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRI 65
+ L I L F C +++ R +++ + G +GK LNTK I R
Sbjct: 1 MNLRITLLAFLCLCATAIL----------RAERVDMLKAGAKANGKALNTKLINSTIDR- 49
Query: 66 QHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRG 125
L R GG L+ P G YLTGS +L S++TL L GA + + + ++ + G
Sbjct: 50 --LNRGGGGTLFFPAGTYLTGSIHLKSNITLELEAGATLLFSDNFDDYLPFVEVRHEGVM 107
Query: 126 RERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWN---------------------- 163
+ + I+ +++ I GE GT+DGQG WW
Sbjct: 108 MKS----FQPLIYAVDAENITIKGE-GTLDGQGKKWWMEFFRVMIDLKDNGMRDINKYQP 162
Query: 164 MWRQR----------------TLP--FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVY 205
MW + TL F RP I+ + + + I V NSPFW ++P +
Sbjct: 163 MWDAQNDTTAIYAETNKDYVSTLQRRFFRPPFIQPVRCKKVKIEGVKIVNSPFWTVNPEF 222
Query: 206 CSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH 265
C NV I+ +TI SPNTDGI+P+S NV I D +IS GDD + +KSG D G
Sbjct: 223 CDNVTIKGITI-NNVPSPNTDGINPESCRNVHISDCHISVGDDCITIKSGRDAQARRLGV 281
Query: 266 PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRN 325
P ITI T S G+ +GSE SG V V + GI +K+ GRGG + +
Sbjct: 282 PCENITITNCTMLSGHGGVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVED 341
Query: 326 ITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLK 385
I VS++ M N ++ + + P+ + I + T V+ I GL+
Sbjct: 342 IRVSNIVMSNIKQEAVVLNLKYSQMPAEAKSERTPIFRNVHISGMTVTDVKTPIKIVGLE 401
Query: 386 NSPFTGICLSNINLQG 401
+P I L +I++QG
Sbjct: 402 EAPIFDIVLRDIHIQG 417
>gi|345013580|ref|YP_004815934.1| glycoside hydrolase [Streptomyces violaceusniger Tu 4113]
gi|344039929|gb|AEM85654.1| glycoside hydrolase family 28 [Streptomyces violaceusniger Tu 4113]
Length = 484
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 135/426 (31%), Positives = 199/426 (46%), Gaps = 59/426 (13%)
Query: 29 IVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSF 88
I P + ITD+G VGDG+T+NT AFR I R+GG + VP G +LTG+
Sbjct: 58 IRPPAFPRRSFRITDYGAVGDGRTMNTAAFRATIAACH---RAGGGQVVVPEGRFLTGAI 114
Query: 89 NLTSHMTLYLAKGAVIKATQDTWNW-PLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVI 147
+L S + L++ GA I + D ++ P++ R Y FI+ G +DV +
Sbjct: 115 HLRSRVNLHVTAGATIAFSPDPRDFLPVV-----LTRWEGTECYNYSPFIYAYGARDVAV 169
Query: 148 TGENGTIDGQGAIW-WNMWRQRTLP---------------------------FTRPNLIE 179
TG GT+DGQ + W W + + P RP +++
Sbjct: 170 TGP-GTLDGQARLGPWESWYRDSGPQGADQKLLREMGSTGAPVARRVFGDGHCLRPKMVQ 228
Query: 180 FMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP--NTDGIDPDSSSNVC 237
F R++++S++ + P W +HPV SNV +R VT+ DS NTDG DP+ S+V
Sbjct: 229 FYRCRNVLVSDLTIVDPPMWTVHPVLSSNVTVRGVTV----DSTLYNTDGCDPECCSDVL 284
Query: 238 IEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENV 297
I +T DD VAVKSG DE G G PS I +R S + G+ VGSE SGGV ++
Sbjct: 285 ITGCRFNTNDDCVAVKSGRDEDGHRVGVPSRNIVVRDCQFSGRWGGMTVGSEMSGGVRDI 344
Query: 298 LAEHINL--------YNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDH 349
AE+ + Y V ++VK N RGGFI + + + ++ + I +
Sbjct: 345 FAENCEINPPDFPGRYPVKHALYVKANKKRGGFIDGVHIRNFTGQDVERDIAFVTMAYNG 404
Query: 350 PDDKFNPNALPV-VNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSP 408
+D LPV V I + + Q + GL G+ LS G+ P S
Sbjct: 405 GED----GTLPVSVRNIHMDRMAIDGAQTVLRLVGLDTDHLRGVRLSRSTFTGILNPDS- 459
Query: 409 PLKCSD 414
+ C+D
Sbjct: 460 -IACTD 464
>gi|261879637|ref|ZP_06006064.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270333653|gb|EFA44439.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 496
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 129/428 (30%), Positives = 196/428 (45%), Gaps = 75/428 (17%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
++++ DFG VGDG TL T+AF +AI + L GG L VP GV+ TG L S++ L+
Sbjct: 52 QVNLKDFGAVGDGTTLCTEAFAKAIDK---LSEQGGGKLIVPGGVWFTGPIVLKSNINLH 108
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
L GAVI+ + D +P+I S+ R R S + +G +++ ITG+ G IDG
Sbjct: 109 LEVGAVIQFSGDESLYPVIKT--SFEGLETR---RCQSPLSANGAKNIAITGQ-GVIDGN 162
Query: 158 GAI-----------------------------WW---------------NMWRQRT---- 169
G +W N+ R T
Sbjct: 163 GQFWRPVKRGKVTDGQWKEILARPGGVEAKKGYWVPNQAYADAEKNADMNVPRAETDEEW 222
Query: 170 ---LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 226
F RP ++ +N +++++ +VIFQNSP WNIHP+ C NV+I V P+ + N D
Sbjct: 223 NAIKRFLRPVMVSLVNCKNVLLKDVIFQNSPAWNIHPLMCENVIIDGVLARNPSYAQNGD 282
Query: 227 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 286
+D +S NV + +S GDD + +KSG DE G G P + + T + G V
Sbjct: 283 ALDLESCKNVLVVNSKFDAGDDGICIKSGKDESGRKRGRPCENVVVDGCTVFAGHGGFVV 342
Query: 287 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR--------- 337
GSE SGGV N+L + VG+ K+ GRGG + NI + D+ M + +
Sbjct: 343 GSEMSGGVRNILVKRCQFLGTDVGLRFKSKRGRGGIVENIFIHDISMTDIKTDAITFNMY 402
Query: 338 ---KGIKIAGDVGDHPDDKFN---PNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTG 391
K + GD+PD+ P+ I I+++ ++ GL P
Sbjct: 403 YGGKSVAEMLADGDNPDNVSKMPVTGETPIFRHIDIRNIVCYGAGRAMEFNGLPEMPIEN 462
Query: 392 ICLSNINL 399
I L N+++
Sbjct: 463 INLENVHI 470
>gi|399031152|ref|ZP_10731291.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398070621|gb|EJL61913.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 562
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 126/430 (29%), Positives = 196/430 (45%), Gaps = 84/430 (19%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
++I DFG V G LNTKAF +AI + + GG + +PPG++LTG L S++ L+
Sbjct: 55 VNIKDFGAVNGGYVLNTKAFADAI---DAVSKKGGGKVVIPPGIWLTGPIILKSNLELHA 111
Query: 99 AKGAVIKATQDTWNWPLIAP----LPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
GA+IK + D +PL+ L ++ R +S I+G L+++ TG+ G
Sbjct: 112 ETGALIKFSTDKSLYPLVETSFEGLNTW---------RCISPIYGKNLENIAFTGK-GVW 161
Query: 155 DGQGAIWWNM---------WRQRTLP---------------------------------- 171
DG G +W + W++
Sbjct: 162 DGSGEVWRQVKKSKLTESQWKKFVASGGVLNEKKESWYPSETFMKASVGADQNVRLDLKT 221
Query: 172 ---------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS 222
F RP L+ NS+ ++ +FQNSP WNIHP+ ++++R VT+ P S
Sbjct: 222 KEEFEAIHDFLRPVLVSIQNSKRVMFDGPVFQNSPAWNIHPLMIEDLIVRNVTVRNPWFS 281
Query: 223 PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS 282
N DG+D +S NV +E+S GDD + +KSG D+ G G P I ++
Sbjct: 282 QNGDGLDVESCKNVIVENSSFDVGDDAICIKSGKDKDGRDRGIPCENIIVKNNIVYHGHG 341
Query: 283 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN------- 335
G+ VGSE SGGV+N+ + + VG+ K+N GRGG + NI +SD+YM +
Sbjct: 342 GVTVGSEMSGGVKNLHVSNCSFMGTDVGLRFKSNRGRGGVVENIFISDIYMTDIPSQAIS 401
Query: 336 ------ARKGIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNS 387
+ + + G+ K P P I+IK+V QQ+ +QGL
Sbjct: 402 FDLYYGGKSIAETLAEGGNTVSSKKVPVDEKTPQFKNISIKNVTIAGAQQAVFLQGLPEM 461
Query: 388 PFTGICLSNI 397
I ++N+
Sbjct: 462 NLENIEITNL 471
>gi|189464497|ref|ZP_03013282.1| hypothetical protein BACINT_00839 [Bacteroides intestinalis DSM
17393]
gi|189438287|gb|EDV07272.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 492
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 130/409 (31%), Positives = 193/409 (47%), Gaps = 55/409 (13%)
Query: 56 KAFREAIYR-IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWP 114
K+ E I R I+ GG +Y P G YLT + ++ S++TLYL GAV++ + ++
Sbjct: 35 KSCTELINRTIEKAASEGGGTIYFPVGTYLTATIHMKSNITLYLESGAVLRFSDKFEDY- 93
Query: 115 LIAPLPSYGRGRERPGGRYMS-FIHGDGLQDVVITGENGTIDGQGAIWW----------- 162
LP E + +S I+ +V I+G GT+DG G WW
Sbjct: 94 ----LPFVTLRWEGTVMKSLSPLIYAHSADNVTISGR-GTLDGNGLKWWLWEFDTRKVIK 148
Query: 163 -------------NMW--RQRTLPFT------------RPNLIEFMNSRSIIISNVIFQN 195
MW + L + RP I+F +I+I NV N
Sbjct: 149 ENGGKLPTLDKLQQMWVDANKDLEISDYYKPSLERRMFRPPFIQFYECTNILIENVKIIN 208
Query: 196 SPFWNIHPVYCSNVVIRYVTILAPADSP---NTDGIDPDSSSNVCIEDSYISTGDDLVAV 252
SPFW I+P +C NV I VTI P+ +P NTDGI+P S NV I D +IS GDD + +
Sbjct: 209 SPFWTINPAFCDNVTIHGVTINNPSSNPKGPNTDGINPSSCRNVRISDCFISVGDDCITI 268
Query: 253 KSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 312
KSG D G YG ITI S G+ +GSE SGGV+ V + GI
Sbjct: 269 KSGRDADGRKYGKACENITITNCIMLSGHGGVVIGSEMSGGVKRVAISNCVFDGTNAGIR 328
Query: 313 VKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNP--NALPVVNGITIKDV 370
+K + GRGG + +I V ++ M+N +G D+ K P P+ I + +V
Sbjct: 329 LKASRGRGGVVEDIRVDNIVMKNI-QGDAFIFDLFYDRLSKVEPVSERTPIFRNIHLSNV 387
Query: 371 WGTKVQQSGLIQGLKNSPFTGICLSNINL---QGVAGPTSPPLKCSDVS 416
G +++ G I+G++ P + + SN+N+ QG T+ ++ ++VS
Sbjct: 388 TGNDIKRIGYIKGIEEMPVSELSFSNMNIVAEQGFKAETATDIRFNNVS 436
>gi|298385760|ref|ZP_06995318.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298261901|gb|EFI04767.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 445
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 129/436 (29%), Positives = 194/436 (44%), Gaps = 59/436 (13%)
Query: 6 VTLSILLSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRI 65
+ L I L F C +++ R +++ + G +GK LNTK I R
Sbjct: 1 MNLRITLLAFLCLCATAIL----------RAERVDMLKAGAKANGKALNTKLINSTIDR- 49
Query: 66 QHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRG 125
L R GG L+ P G YLTGS +L S++TL L GA + + + ++ + G
Sbjct: 50 --LNRGGGGTLFFPAGTYLTGSIHLKSNITLELEAGATLLFSDNFDDYLPFVEVRHEGVM 107
Query: 126 RERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWN---------------------- 163
+ + I+ +++ I GE GT+DGQG WW
Sbjct: 108 MKS----FQPLIYAVDAENITIKGE-GTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQP 162
Query: 164 MWRQR----------------TLP--FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVY 205
MW + TL F RP I+ + + + I V NSPFW ++P +
Sbjct: 163 MWDAQNDTTAIYAETNKDYVSTLQRRFFRPPFIQPVRCKKVKIEGVKIVNSPFWTVNPEF 222
Query: 206 CSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH 265
C NV I+ +TI SPNTDGI+P+S NV I D +IS GDD + +KSG D G
Sbjct: 223 CDNVTIKGITI-NNVPSPNTDGINPESCRNVHISDCHISVGDDCITIKSGRDAQARRLGV 281
Query: 266 PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRN 325
P ITI T + G+ +GSE SG V V + GI +K+ GRGG + +
Sbjct: 282 PCENITITNCTMLAGHGGVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVED 341
Query: 326 ITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLK 385
I VS++ M N ++ + + P+ + I + T + I GL+
Sbjct: 342 IRVSNIVMSNIKQEAVVLNLKYSQMPAEAKSERTPIFRNVHISGMTVTDAKTPIKIVGLE 401
Query: 386 NSPFTGICLSNINLQG 401
+P + I L +I++QG
Sbjct: 402 EAPISDIVLRDIHIQG 417
>gi|399889206|ref|ZP_10775083.1| glycoside hydrolase family protein [Clostridium arbusti SL206]
Length = 756
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 125/422 (29%), Positives = 191/422 (45%), Gaps = 68/422 (16%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
++ D+G VGDG T ++KA ++AI + G ++ +P G Y T L S MTL +
Sbjct: 146 NVKDYGAVGDGVTKDSKAIQDAIDAC-----TPGGVVVIPAGTYYTAPLKLKSDMTLNIE 200
Query: 100 KGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGA 159
KGA I A++D ++ +I R YMS I +++ I GE GTIDG
Sbjct: 201 KGATILASRDVSDYKIID-----SRWEGTSFKSYMSIITAIDAKNLNIIGE-GTIDGNAG 254
Query: 160 -----------------------------------------------IWWNMWRQR--TL 170
+WW+ + T
Sbjct: 255 PIKEAAAGETEDAYGYPVNKVNVSGEYDYNMGKYNGDKSTAVNFDMGLWWDNPKATDPTK 314
Query: 171 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL---APADSPNTDG 227
RP I+ +N ++I V QNSP W IHP+Y N+ I V + +P DSPNTDG
Sbjct: 315 QTARPRTIQLINCDGVLIQGVKVQNSPSWTIHPLYSKNITIADVNVKNPSSPVDSPNTDG 374
Query: 228 IDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVG 287
+DPDS N+ + ++ GDD +A+KSG D G G PSS ITIR G+ +G
Sbjct: 375 LDPDSVDNLLVVNTTFDVGDDCIAIKSGKDAEGRKIGIPSSNITIRNSLMLHGHGGVTLG 434
Query: 288 SETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-ARKGIKIAGDV 346
SE SGG+ N+ + + +G+ +KT GRGG I+++ ++ M+N + I +
Sbjct: 435 SEMSGGINNINIKDDIFDSTNIGVRLKTLRGRGGVIQDVVFDNIMMKNISSDAFNINSNY 494
Query: 347 GDH----PDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 402
+ P P + + K++ +++ QGL+ P G+ LSNIN+
Sbjct: 495 SSNGAPLPYTGVVDETTPTIKNLVFKNITAIGAKEASFFQGLQEMPVDGVTLSNINVTAD 554
Query: 403 AG 404
G
Sbjct: 555 KG 556
>gi|182415146|ref|YP_001820212.1| galacturan 1,4-alpha-galacturonidase [Opitutus terrae PB90-1]
gi|177842360|gb|ACB76612.1| Galacturan 1,4-alpha-galacturonidase [Opitutus terrae PB90-1]
Length = 478
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 125/376 (33%), Positives = 190/376 (50%), Gaps = 37/376 (9%)
Query: 41 ITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAK 100
+TDFG VGDG TLNT+AF AI + +GG L VP G + TG F L S + L+L
Sbjct: 91 LTDFGAVGDGTTLNTEAFARAIAAVAK---AGGGKLVVPAGTFRTGPFALCSSLELHLEA 147
Query: 101 GAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMS-FIHGDGLQDVVITGENGTIDGQGA 159
GA+I+A +W L P + + + IHG L DV ITG +G IDG GA
Sbjct: 148 GALIQAPATFADWGLPEPTTFSSQAEVNAAVKPVPPLIHGRKLHDVAITG-SGQIDGNGA 206
Query: 160 IWWNMWRQRT-------LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIR 212
+WW W +R L + R ++I + +++V NS +++ P +++ I
Sbjct: 207 LWW-AWSERAARAQRGRLVYKRTHMIIIDGCERLRVADVTLSNSAMFHLVPRRITDLTIE 265
Query: 213 YVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSG-----WDEYGIAYGHPS 267
V + AP ++PNTD IDP S +N I I TGDD + +KSG ++ I +GH
Sbjct: 266 RVKVRAPEEAPNTDAIDPGSVTNAWIHHCDIDTGDDNIVIKSGGTNILIEDCVIKHGH-- 323
Query: 268 SGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 327
GI++GSET+ GV N+L + GI +K+ G GG + NI
Sbjct: 324 ---------------GISIGSETTEGVRNMLVRRCSFDGTDNGIRIKSMRGAGGVVENIR 368
Query: 328 VSDVYMENARKGIKIAGDVGDH--PDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLK 385
+ + M++ I + D+ P+ + +P +PV+ I I V T ++G I GL
Sbjct: 369 YTGITMKDVENAIVLDLTYTDNNRPNFRGDPTKIPVIRDILIDHVTVTGSLKAGKIVGLP 428
Query: 386 NSPFTGICLSNINLQG 401
+SP +G+ L ++ +Q
Sbjct: 429 DSPISGVTLRDVTIQA 444
>gi|239628552|ref|ZP_04671583.1| glycoside hydrolase [Clostridiales bacterium 1_7_47_FAA]
gi|239518698|gb|EEQ58564.1| glycoside hydrolase [Clostridiales bacterium 1_7_47FAA]
Length = 695
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 130/412 (31%), Positives = 199/412 (48%), Gaps = 56/412 (13%)
Query: 33 RYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTS 92
R+ + +++ D+G V D L+T+A ++AI + GG + +P G Y TG+ L
Sbjct: 13 RFPDLTVNVLDYGAVADDDKLDTQAIQKAI---DEVSEKGGGKVVIPKGTYDTGAITLKD 69
Query: 93 HMTLYLA-KGAVIKATQDT--WNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITG 149
++ L L K ++ TQD N+PL+ Y +P Y +FI+ ++ +TG
Sbjct: 70 NVNLCLEDKETKLQFTQDINHDNYPLV-----YSHWEGQPMYNYSAFIYAKDAVNIALTG 124
Query: 150 ENGTIDGQ---GAIWWNMWR---------QRT---------LP----------FTRPNLI 178
+ GT+DGQ G W M R RT +P F RPN I
Sbjct: 125 Q-GTLDGQAGDGTPWCWMSRDYMTDYQDDDRTALINMNNDRVPVEERIFGEGHFLRPNFI 183
Query: 179 EFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCI 238
+ + ++++ V SP W ++PV C+NV +R + I A N DGIDP+SS+ V I
Sbjct: 184 QVIGCENVLVEGVTLLRSPMWEVNPVLCTNVTVRGIHISTKA--ANNDGIDPESSNYVLI 241
Query: 239 EDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVL 298
ED+Y TGDD +A+KSG + G A PS I IR + GI +GSE SGGV NV
Sbjct: 242 EDNYFDTGDDCIAIKSGRNADGRATNTPSQNIIIRNNIFADGHGGITIGSEVSGGVNNVF 301
Query: 299 AE--HINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG---DVGDHPDDK 353
A+ N N+ + KTN RGG I NI + + +++ + A + G H D
Sbjct: 302 ADNNQFNSPNLKYALRFKTNAVRGGIIENIYLRNTTIQSVSDAVVHATMLYEEGRHGD-- 359
Query: 354 FNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGP 405
+P ITI+++ T ++ ++ P TG+ + N+ L V P
Sbjct: 360 ----YMPQFRNITIENLKSTGGDFGIFVEAFEDVPVTGLVMRNVELNEVENP 407
>gi|380695284|ref|ZP_09860143.1| polygalacturonase (Pectinase) [Bacteroides faecis MAJ27]
Length = 438
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 131/422 (31%), Positives = 190/422 (45%), Gaps = 52/422 (12%)
Query: 20 LASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVP 79
+A + C+ V R D + I G +GK LNTK I R L R+GG L+ P
Sbjct: 1 MAFLCLCAATVLHAERVDMLKI---GAKANGKVLNTKLINTTIDR---LNRNGGGTLFFP 54
Query: 80 PGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHG 139
G YLTGS L S++TL L GA + + + ++ + G + + I+
Sbjct: 55 AGTYLTGSIRLKSNITLELEAGATLLFSDNFDDYLPFVEVRHEGVMMKS----FQPLIYA 110
Query: 140 DGLQDVVITGENGTIDGQGAIWWN----------------------MWRQR--------- 168
+++ I GE GT+DGQG WW MW
Sbjct: 111 VDAENITIKGE-GTLDGQGKKWWMEFFRVMIDLKDNGMHDLNKYQPMWDAENDTTAIYTE 169
Query: 169 -------TLP--FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP 219
TL F RP I+ + + + I V NSPFW ++P +C NV I+ +TI
Sbjct: 170 TNKDYVSTLQRRFFRPPFIQPVRCKKVKIEGVKIVNSPFWTVNPEFCDNVTIKGITI-DN 228
Query: 220 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS 279
SPNTDGI+P+S NV I D +IS GDD + +KSG D G P ITI T S
Sbjct: 229 VPSPNTDGINPESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLS 288
Query: 280 PFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG 339
G+ +GSE SG V V + GI +K+ GRGG + +I VS++ M N ++
Sbjct: 289 GHGGVVIGSEMSGSVRKVTISNCVFDGTERGIRIKSTRGRGGVVEDIRVSNIVMSNIKQE 348
Query: 340 IKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL 399
+ + P+ + I + T V+ I GL+ +P + I L +I++
Sbjct: 349 AVVLNLKYSPMPAEPKSERTPIFRNVHISGMTVTDVKTPIKIVGLEEAPISDIVLRDIHI 408
Query: 400 QG 401
QG
Sbjct: 409 QG 410
>gi|300772072|ref|ZP_07081942.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
gi|300760375|gb|EFK57201.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
Length = 570
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 133/471 (28%), Positives = 201/471 (42%), Gaps = 78/471 (16%)
Query: 2 FRFLVTLSILLSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREA 61
+F + LS ++ + + I + + D ISI FG GDG +LNT+A A
Sbjct: 23 LKFALLGWFTLSSYDAVQAQTAPSLPNIKQVNIKADTISIVRFGAQGDGISLNTQAINRA 82
Query: 62 IYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPS 121
I + GG ++ +P GV++TG L S++ L++ + A++ T D + L+
Sbjct: 83 I---AETSQKGGGVVLIPAGVWVTGPIELKSNINLHIQRDAILLFTDDFDQYKLVE---- 135
Query: 122 YGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIW------------W------- 162
+P R S I G L+++ ITG G IDG G W W
Sbjct: 136 -ANWEGQPAWRNQSPISGSNLENIAITG-TGIIDGNGGAWRMVKKSKMTASQWKKLVESG 193
Query: 163 -------NMWR--------------QRTLP------------FTRPNLIEFMNSRSIIIS 189
N+W +P F RPNL+ N + I++
Sbjct: 194 GVLNEEKNIWYPSASSLNGSKTKNPSAVVPGKTAADYADVKDFFRPNLLVLNNCKQILLE 253
Query: 190 NVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDL 249
V FQNSP WN+HP+ C ++ +R V + P + N DGID +S NV +E+S GDD
Sbjct: 254 GVTFQNSPAWNLHPLLCQDLTVRNVMVRNPWYAQNGDGIDIESCKNVLVENSTFDVGDDG 313
Query: 250 VAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGV 309
+ +KSG DE G P+ + IR G +GSE SGG N+ + +
Sbjct: 314 ICIKSGRDEAGRLRAVPTENVIIRNNVVYHAHGGFVIGSEMSGGARNIWVYDCSFIGTDI 373
Query: 310 GIHVKTNIGRGGFIRNITV--------------SDVYMENARKGIKIAGDVGDHPDDKFN 355
G+ KT GRGG + NI + +D+Y E A+ I + GD +
Sbjct: 374 GLRFKTTRGRGGIVENIFIDRISMFDIPGEAILADMYYE-AKDPIPLIGDKQEAVKAVTL 432
Query: 356 P--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 404
P A P IKDV ++ +GL G+ L NI+++ G
Sbjct: 433 PVTEATPQFRNFKIKDVVVNGADKAIFFRGLPEMNIKGMSLENISIKSKKG 483
>gi|448349773|ref|ZP_21538602.1| glycoside hydrolase family 28 [Natrialba taiwanensis DSM 12281]
gi|445639084|gb|ELY92202.1| glycoside hydrolase family 28 [Natrialba taiwanensis DSM 12281]
Length = 522
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/391 (30%), Positives = 178/391 (45%), Gaps = 37/391 (9%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+ I +FG NT+A + A+ +GGT+ VPPG Y+TG + TL+
Sbjct: 8 RYDIREFGAQSGSDDSNTEAIQTAL---DECAGTGGTV-SVPPGTYVTGPLRVGDRTTLH 63
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
L GA ++ D +P + S G ++ G + + DG V ITG+ G IDG
Sbjct: 64 LEAGATLRFVGDYEAFPTVQ---SRWEGWDQIG--FHPCLLVDGTDTVSITGQ-GAIDGN 117
Query: 158 GAIWWNMW-----------RQRTLPFT--------------RPNLIEFMNSRSIIISNVI 192
G WW + + R F RP L++ ++ ++ +S V
Sbjct: 118 GEYWWQFYGEPEPMLPDGLQDRLAEFEAQNDKQDDVSSFTHRPPLLQIFDAENVTVSGVT 177
Query: 193 FQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAV 252
+NSPFWN H VY NV I V I PA +PN DGID DSS V I D+YI+ GDD + +
Sbjct: 178 LRNSPFWNTHVVYSENVTITDVNIENPAGAPNGDGIDIDSSRYVRISDAYINAGDDAICI 237
Query: 253 KSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 312
KSG D G G P+S IT+ T + G+ +GSE SG V +V + + GI
Sbjct: 238 KSGKDAEGREVGEPASQITVANCTVEAGHGGVVIGSEMSGDVRDVTVSNCTFTDTDRGIR 297
Query: 313 VKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNP--NALPVVNGITIKDV 370
+KT GRGG + ++ + M I G D P P+V ++ ++
Sbjct: 298 IKTQRGRGGVVEDLRFDQIVMRRIACPFVINGYYFTPLDSDPEPTGEGTPLVRNVSFSNI 357
Query: 371 WGTKVQQSGLIQGLKNSPFTGICLSNINLQG 401
V+ +G GL F GI ++ +
Sbjct: 358 TARNVETAGFFAGLPERYFEGISFRDVRIDA 388
>gi|375309358|ref|ZP_09774639.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. Aloe-11]
gi|375078667|gb|EHS56894.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. Aloe-11]
Length = 504
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/373 (32%), Positives = 191/373 (51%), Gaps = 24/373 (6%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
+I D+G DGKT T+A AI + +GG + +P G YLTG+ S++ L+L+
Sbjct: 56 NIVDYGAPQDGKTPATEAIANAIEAASN---AGGGTVVIPSGTYLTGAIFFKSNIELHLS 112
Query: 100 KGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGA 159
GA++ + + ++P++ S G +R + S I+G L+++ +TG +G ++G G
Sbjct: 113 PGAILSFSTNPADYPVVE---SRWEGVQRE--VHASCIYGQNLENISVTG-SGILEGNGQ 166
Query: 160 IWWNMWRQ--RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL 217
WW R L + RP LI F + + I +++ +NSP W I+P+ C NV I ++IL
Sbjct: 167 PWWEKHRNHPEELQYPRPKLISFDRCQRVTIKDIMLKNSPSWTINPIACYNVTIDNLSIL 226
Query: 218 APADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTG 277
PADSPNTDGI+P+S SNV I + I GDD +A+K+G ++ ITI T
Sbjct: 227 NPADSPNTDGINPESCSNVRISNCNIDVGDDCIAIKAGTEDTQERIA--CENITITNCTM 284
Query: 278 SSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 337
G+ +GSE SG + NV + GI +K+ GRGG I +I VS++ ME
Sbjct: 285 VHGHGGVVLGSEMSGDIRNVTISNCVFKQTDRGIRLKSRRGRGGIIEDIRVSNIVMEEVI 344
Query: 338 KG--IKIAGDVGDHPDDKF----NP----NALPVVNGITIKDVWGTKVQ-QSGLIQGLKN 386
+ + G DK+ NP + P I D+ +V +G + GL
Sbjct: 345 CPFILNLYYFCGPRGKDKYVWDKNPYPVTDETPCFRRIHFADITARQVHAAAGFLYGLAE 404
Query: 387 SPFTGICLSNINL 399
I SNI++
Sbjct: 405 QYIAEITFSNIDI 417
>gi|423223780|ref|ZP_17210249.1| hypothetical protein HMPREF1062_02435 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638155|gb|EIY32008.1| hypothetical protein HMPREF1062_02435 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 507
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 128/443 (28%), Positives = 190/443 (42%), Gaps = 84/443 (18%)
Query: 33 RYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTS 92
++ + K+++ DFG VG+G+ L T AF +AI L GG L VP GV+ TG L S
Sbjct: 44 KFPDRKVNLADFGAVGNGEELCTAAFAKAI---DALAEKGGGHLIVPAGVWFTGPIVLKS 100
Query: 93 HMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENG 152
++ L+L KGAVI + D +PL+ + R R S + G L++V ITGE G
Sbjct: 101 NIDLHLEKGAVILFSPDVDLYPLVETVFEGLDTR-----RCQSPVSGRNLENVAITGE-G 154
Query: 153 TIDGQGAIWWNMWRQRTLP----------------------------------------- 171
IDG G W + R++
Sbjct: 155 AIDGNGHYWRPLKREKVTEGVWKQTIARGGVYKRPTYWFPYPQTLKGDTISNMNVPQNLK 214
Query: 172 ----------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 221
F RP ++ + +++ + VIFQNSP WN+HP+ C NV+I V + P+
Sbjct: 215 TEEEWQSVRHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLIEEVQVRNPSY 274
Query: 222 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 281
+ N DG+D +S N I +S GDD + +KSG DE G G + + T
Sbjct: 275 AQNGDGLDLESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRGRVCENVVVDGCTVFKGH 334
Query: 282 SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM-------- 333
G VGSE SGGV NV + VG+ K+ GRGG + NI + ++ M
Sbjct: 335 GGFVVGSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWIRNIAMMDIPTEPI 394
Query: 334 ------------ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLI 381
E G K+ V P D+ P I +K++ +++
Sbjct: 395 TFNLYYGGKSAVEVLESGEKVLAKVEPLPVDE----TTPCFRNIHVKNLVCAGARRALFF 450
Query: 382 QGLKNSPFTGICLSNINLQGVAG 404
G+ P GI L +I++ G
Sbjct: 451 NGIPEMPIDGIVLEDIDITSKLG 473
>gi|431796309|ref|YP_007223213.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430787074|gb|AGA77203.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 524
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 137/419 (32%), Positives = 197/419 (47%), Gaps = 56/419 (13%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
+I D GG +G+ L T+A + AI + +GG L+ P G YLTG+ ++ S+ TL+L
Sbjct: 29 NILDVGGNNEGQ-LCTEAIQSAIDKAAE---AGGGTLFFPAGDYLTGAIHMKSNTTLHLD 84
Query: 100 KGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGA 159
GAV++ + N+ P R + I+ +++ ITG G IDGQG
Sbjct: 85 AGAVLRFST---NFDHYLPFVQM-RWEGTVMNNFSPLIYAYEAENITITGR-GKIDGQGK 139
Query: 160 IWW--------------------NMWR------------QRT--LPFTRPNLIEFMNSRS 185
WW MW Q+T L F RP LI+ ++
Sbjct: 140 DWWMEMYRIHEAAPETLEESKYQKMWTAANEGLETSPNYQKTMRLKFFRPPLIQPFRCKN 199
Query: 186 IIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYIST 245
+ I V NSPFW ++P +C NV I VTI P SPNTDGI+P S NV I DS+IS
Sbjct: 200 VRIEGVTIVNSPFWTVNPAFCDNVTITGVTIENPP-SPNTDGINPTSCRNVHISDSHISV 258
Query: 246 GDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLY 305
GDD + +KSG D G + P+ +TI T S G+ +GSE SG + V +
Sbjct: 259 GDDCITIKSGRDMDGRKWDTPTENVTITNCTMLSGHGGVVIGSEVSGSIRKVTISNCVFD 318
Query: 306 NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNP-----NALP 360
GI +K GRGG + I V +V M K I++ V + DK P
Sbjct: 319 GTDRGIRLKAARGRGGVVEEIRVDNVVM----KDIQLEAIVMNLFYDKNTKEGPVTEETP 374
Query: 361 VVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL---QGVAGPTSPPLKCSDVS 416
I I +V G+++ +G I G+ P I SNIN+ +G++ T+ ++ DV
Sbjct: 375 AFRNIHISNVTGSQINVAGKILGIPEMPIDQISFSNINMDAKEGISIHTATNVELHDVQ 433
>gi|329956221|ref|ZP_08296901.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328524695|gb|EGF51756.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 506
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 130/443 (29%), Positives = 194/443 (43%), Gaps = 84/443 (18%)
Query: 33 RYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTS 92
R+ + +++ +F VG+G+TL T AF +AI L GG L VP GV+LTG L S
Sbjct: 44 RFPDRTVNLAEFNAVGNGETLCTSAFADAI---NTLSEQGGGHLVVPAGVWLTGPIVLKS 100
Query: 93 HMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENG 152
++ L+L KGAVI + D +PL+ + R R S I G L++V ITGE G
Sbjct: 101 NIDLHLEKGAVILFSPDVDLYPLVETVFEGLDTR-----RCQSPISGRNLENVAITGE-G 154
Query: 153 TIDGQGAIW---------WNMWRQRT----------------------------LP---- 171
IDG G W ++W+Q T +P
Sbjct: 155 AIDGNGHYWRPLKREKVTESVWKQTTARGGVYKRPTYWFPYPETLKGDTISNMNVPQNLQ 214
Query: 172 ----------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 221
F RP ++ + +++ + VIFQNSP WN+HP+ C NV++ V + P+
Sbjct: 215 TEEEWQSVRHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLVEDVQVRNPSY 274
Query: 222 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 281
+ N DG+D +S N I +S GDD + +KSG DE G P + + T
Sbjct: 275 AQNGDGLDLESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRARPCENVVVDGCTVFKGH 334
Query: 282 SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM-------- 333
G VGSE SGGV NV + VG+ K+ GRGG + NI +++V M
Sbjct: 335 GGFVVGSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGIVENIWITNVSMMDIPTEPI 394
Query: 334 ------------ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLI 381
E G K+ V P D+ P I +K++ +++
Sbjct: 395 TFNLYYGGKSAVEVLESGEKVPAKVEPLPVDE----TTPCFRNIHVKNLICAGARRALFF 450
Query: 382 QGLKNSPFTGICLSNINLQGVAG 404
G+ P + L +I++ G
Sbjct: 451 NGIPEMPIENVVLEDIDITSRLG 473
>gi|295084333|emb|CBK65856.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
Length = 430
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 127/399 (31%), Positives = 182/399 (45%), Gaps = 53/399 (13%)
Query: 45 GGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVI 104
G +GKTLNTK I R L R GG L+ P G YLTGS +L S++TL L GA +
Sbjct: 5 GAKANGKTLNTKLINSTIDR---LNRGGGGTLFFPAGTYLTGSIHLKSNITLELEAGATL 61
Query: 105 KATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWN- 163
+ + ++ + G + + I+ +++ I GE GT+DGQG WW
Sbjct: 62 LFSDNFDDYLPFVEVRHEGVMMKS----FQPLIYAVDAENITIKGE-GTLDGQGKKWWME 116
Query: 164 ---------------------MWR--------------------QRTLPFTRPNLIEFMN 182
MW QR F RP I+ +
Sbjct: 117 FFRVMIDLKDNGMRDVNKYQPMWDAANDTTAIYAETNKDYVNTLQRR--FFRPPFIQPVR 174
Query: 183 SRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSY 242
+ + I V NSPFW ++P +C NV I+ +TI A SPNTDG++P+S NV I D +
Sbjct: 175 CKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITI-DNAPSPNTDGVNPESCRNVHISDCH 233
Query: 243 ISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHI 302
IS GDD + +KSG D G P ITI T S G+ +GSE SG V V +
Sbjct: 234 ISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGGVVIGSEMSGSVRKVTISNC 293
Query: 303 NLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVV 362
GI +K+ GRGG + +I VS+V M N ++ + + P+
Sbjct: 294 VFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMPAEPKSERTPIF 353
Query: 363 NGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 401
+ I + T V+ I GL+ +P + I L +I++QG
Sbjct: 354 RNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQG 392
>gi|395803621|ref|ZP_10482865.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434175|gb|EJG00125.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 553
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 128/433 (29%), Positives = 196/433 (45%), Gaps = 84/433 (19%)
Query: 36 NDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMT 95
N +++ DFG V G LNTKAF +AI L + GG L +PPG++LTG L S++
Sbjct: 48 NYNVNLKDFGAVNGGYVLNTKAFADAI---DALSKKGGGKLIIPPGIWLTGPIILKSNIE 104
Query: 96 LYLAKGAVIKATQDTWNWPLIAP----LPSYGRGRERPGGRYMSFIHGDGLQDVVITGEN 151
L+ +GA+IK + D +P+I L ++ R +S I+G L+++ TG N
Sbjct: 105 LHAERGALIKFSTDKSLYPIIETSFEGLNTW---------RCISPIYGKNLENIAFTG-N 154
Query: 152 GTIDGQGAIWWNM---------WRQRTLP------------------------------- 171
G DG G W + W++
Sbjct: 155 GVWDGSGEAWRQVKKSKLTDEQWKKFVASGGVLNEKKDSWYPSEQYLKGAKGADQNIRHD 214
Query: 172 ------------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP 219
F RP L+ NS+ ++ +FQNSP WN+HP+ ++++R VT+ P
Sbjct: 215 LKTKEDFEAIHDFLRPVLVSIQNSKRVMFDGPVFQNSPAWNLHPLLIEDLIVRNVTVRNP 274
Query: 220 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS 279
S N DG+D +S NV IE+S GDD + +KSG D+ G G P I ++
Sbjct: 275 WFSQNGDGLDVESCKNVIIENSSFDVGDDAICIKSGKDKDGRDRGVPCENIIVKNNIVYH 334
Query: 280 PFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK- 338
G+ VGSE SGGV+N+ + VG+ K+ GRGG + NI +SDV+M +
Sbjct: 335 GHGGVTVGSEMSGGVKNLHVSNCTFMGTDVGLRFKSTRGRGGVVENIYISDVFMTDIPSQ 394
Query: 339 --------GIKIAGDVGDHPDDKFNPNALPV------VNGITIKDVWGTKVQQSGLIQGL 384
G K + + + A+PV I+IK++ QQ+ +QGL
Sbjct: 395 AISFDLYYGGKSIAETLAEGGNTVSTKAIPVNEETPQFKNISIKNITIKGAQQAVFLQGL 454
Query: 385 KNSPFTGICLSNI 397
I ++N+
Sbjct: 455 PEMNLENIEITNL 467
>gi|431753622|ref|ZP_19542291.1| polygalacturonase [Enterococcus faecium E2620]
gi|430611655|gb|ELB48732.1| polygalacturonase [Enterococcus faecium E2620]
Length = 445
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/268 (37%), Positives = 150/268 (55%), Gaps = 12/268 (4%)
Query: 71 SGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPG 130
+GG + VP G +LTG+ L S++ L+L+ GAV+K + D ++P++ S G R
Sbjct: 29 AGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPIVH---SRWEGVHRK- 84
Query: 131 GRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQR--TLPFTRPNLIEFMNSRSIII 188
Y S I+ ++++ +TG GT+DG G WWN +R L + RP L+ F N I +
Sbjct: 85 -VYASCIYAQNVENISVTG-FGTLDGNGKKWWNTFRNEPDNLAYPRPKLMSFHNCHRITV 142
Query: 189 SNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDD 248
++ SP W I+P+ CSN +TIL PADSPNTDGIDP+S NV I + +I GDD
Sbjct: 143 KDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDD 202
Query: 249 LVAVKSGWDEYGIAYGH-PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNV 307
+A+K+G ++ Y ITI T G+ +GSE SG + N+ +
Sbjct: 203 CIAIKAGTED---TYERIACENITITNCTMVHGHGGVVLGSEMSGSIRNITISNCIFQET 259
Query: 308 GVGIHVKTNIGRGGFIRNITVSDVYMEN 335
GI +K+ GRGG + +I VS++ M+N
Sbjct: 260 DRGIRLKSRRGRGGIVEDIRVSNIVMDN 287
>gi|257889036|ref|ZP_05668689.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,141,733]
gi|257825099|gb|EEV52022.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,141,733]
Length = 445
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/268 (37%), Positives = 150/268 (55%), Gaps = 12/268 (4%)
Query: 71 SGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPG 130
+GG + VP G +LTG+ L S++ L+L+ GAV+K + D ++P++ S G R
Sbjct: 29 AGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPIVH---SRWEGVHRK- 84
Query: 131 GRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQR--TLPFTRPNLIEFMNSRSIII 188
Y S I+ ++++ +TG GT+DG G WWN +R L + RP L+ F N I +
Sbjct: 85 -VYASCIYAQNVENISVTG-FGTLDGNGKKWWNTFRNEPDNLAYPRPKLMSFHNCHRITV 142
Query: 189 SNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDD 248
++ SP W I+P+ CSN +TIL PADSPNTDGIDP+S NV I + +I GDD
Sbjct: 143 KDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDD 202
Query: 249 LVAVKSGWDEYGIAYGH-PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNV 307
+A+K+G ++ Y ITI T G+ +GSE SG + N+ +
Sbjct: 203 CIAIKAGTED---TYERIACENITITNCTMVHGHGGVVLGSEMSGSIRNITISNCIFQET 259
Query: 308 GVGIHVKTNIGRGGFIRNITVSDVYMEN 335
GI +K+ GRGG + +I VS++ M+N
Sbjct: 260 DRGIRLKSRRGRGGIVEDIRVSNIVMDN 287
>gi|325300479|ref|YP_004260396.1| Exo-poly-alpha-galacturonosidase [Bacteroides salanitronis DSM
18170]
gi|324320032|gb|ADY37923.1| Exo-poly-alpha-galacturonosidase [Bacteroides salanitronis DSM
18170]
Length = 493
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 128/439 (29%), Positives = 189/439 (43%), Gaps = 84/439 (19%)
Query: 34 YRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSH 93
+ +++++++DFG VGDG L T+AF AI L + GG L VP GV+ TG L S+
Sbjct: 45 FPDNEVNLSDFGAVGDGTQLCTEAFARAI---DALSQKGGGRLTVPAGVWFTGPIVLKSN 101
Query: 94 MTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGT 153
+ L++ KGAVI + D +PL+ + R R S I G L +V ITG+ G
Sbjct: 102 INLHVEKGAVILFSPDIDLYPLVETVFEGLDTR-----RCQSPISGRNLTNVAITGQ-GA 155
Query: 154 IDGQGAIWWNMWRQRTL------------------------------------------- 170
IDG G W + RQ+
Sbjct: 156 IDGNGHFWRPLKRQKVTESQWKAATSRGGVYKRADYWFPYPGTLKGDTISNMNVPQNLKT 215
Query: 171 --------PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS 222
PF RP ++ + +++ + VIFQNSP WN+HP+ C NV+I V + P+ +
Sbjct: 216 EEEWQSIRPFLRPVMVSLIECKNVWLEGVIFQNSPAWNLHPLMCENVLIENVEVRNPSYA 275
Query: 223 PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS 282
N DG+D +S N I +S GDD + +KSG DE G P + + T
Sbjct: 276 QNGDGLDLESCRNALIVNSTFDVGDDGICLKSGKDEDGRRRARPCENVIVDGCTVFKGHG 335
Query: 283 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM--------- 333
G VGSE SGGV NV + VG+ K+ GRGG + NI V +V M
Sbjct: 336 GFVVGSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWVRNVSMIDIATEPVT 395
Query: 334 -----------ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQ 382
E G + +V P D+ P I I+ + +++
Sbjct: 396 FNLYYGGKSAVEVLESGEVVPAEVPAMPVDE----TTPCFRNIHIERLTCAGARRAMYFN 451
Query: 383 GLKNSPFTGICLSNINLQG 401
G+ P GI L ++ ++
Sbjct: 452 GIPEMPIDGITLKHVRIRA 470
>gi|393781893|ref|ZP_10370086.1| hypothetical protein HMPREF1071_00954 [Bacteroides salyersiae
CL02T12C01]
gi|392674779|gb|EIY68222.1| hypothetical protein HMPREF1071_00954 [Bacteroides salyersiae
CL02T12C01]
Length = 509
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 138/473 (29%), Positives = 208/473 (43%), Gaps = 81/473 (17%)
Query: 4 FLVTLSILLSYFNCFSLASVVT-----CSGIVPMRYRNDKISITDFGGVGDGKTLNTKAF 58
FL ++L S+ + + T + R+ + K+S+ DFG VG+G L T+AF
Sbjct: 9 FLCVWAVLSSWAQTYKYEEIYTNLPFAMPKVEAPRFPDLKVSLPDFGAVGNGVELCTEAF 68
Query: 59 REAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAP 118
+AI + L GG L VP G++LTG L S++ L++ KGAV+ + D +PL+
Sbjct: 69 EKAI---ETLSSRGGGHLIVPAGIWLTGPIVLKSNIDLHIEKGAVVLFSPDVELYPLVET 125
Query: 119 LPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIW---------WNMWRQ-- 167
+ R R S + G L +V ITG+ G IDG G W ++W+Q
Sbjct: 126 VFEGLDTR-----RCQSPVSGRNLTNVAITGQ-GAIDGNGHFWRPLKREKVTESVWKQTI 179
Query: 168 ----------------RTLP------------------------FTRPNLIEFMNSRSII 187
+TL F RP ++ + +++
Sbjct: 180 ARGGVYKRPTYWFPYPQTLKGDTISNMNVPQNLTTEEEWQSVRHFLRPVMVSLIECKNVW 239
Query: 188 ISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGD 247
+ VIFQNSP WN+HP+ C NV+I V + P+ + N DG+D +S N I +S GD
Sbjct: 240 LQGVIFQNSPAWNLHPLMCENVLIEEVQVRNPSYAQNGDGLDLESCKNALIVNSTFDVGD 299
Query: 248 DLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNV 307
D + +KSG DE G + + T G VGSE SGGV NV +
Sbjct: 300 DGICLKSGKDEDGRRRARSCENVVVDGCTVFKGHGGFVVGSEMSGGVRNVSVSNCQFLGT 359
Query: 308 GVGIHVKTNIGRGGFIRNITVSDVYME---------NARKGIKIAGDV---GDHPDDKFN 355
VG+ K+ GRGG + NI V +V M N G K A +V G+ K +
Sbjct: 360 DVGLRFKSKRGRGGIVENIWVRNVSMMDIPTEPVTFNLYYGGKSAVEVLESGEKVPLKVD 419
Query: 356 P----NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 404
P P I I ++ + +++ G+ P GI L N+++ G
Sbjct: 420 PLPVDETTPCFRNIHISNLVCSNARRALFFNGIPEMPIDGITLENLDITSQIG 472
>gi|430837653|ref|ZP_19455615.1| polygalacturonase [Enterococcus faecium E0680]
gi|430840334|ref|ZP_19458261.1| polygalacturonase [Enterococcus faecium E0688]
gi|430859274|ref|ZP_19476887.1| polygalacturonase [Enterococcus faecium E1552]
gi|430487167|gb|ELA63937.1| polygalacturonase [Enterococcus faecium E0680]
gi|430489820|gb|ELA66395.1| polygalacturonase [Enterococcus faecium E0688]
gi|430544018|gb|ELA84068.1| polygalacturonase [Enterococcus faecium E1552]
Length = 445
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 116/342 (33%), Positives = 171/342 (50%), Gaps = 23/342 (6%)
Query: 72 GGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGG 131
GG + VP G +LTG+ L S++ L+L+ GAV+K + D ++P++ S G R
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVVH---SRWEGVHRK-- 84
Query: 132 RYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQR--TLPFTRPNLIEFMNSRSIIIS 189
Y S I+ ++++ +TG GT+DG G WW+ +R L + RP L+ F N I +
Sbjct: 85 VYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 190 NVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDL 249
N+ SP W I+P+ CSN +TIL PADSPNTDGIDP+S NV I + +I GDD
Sbjct: 144 NIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 250 VAVKSGWDEYGIAYGH-PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVG 308
+A+K+G ++ Y ITI T G+ +GSE SG + N+ +
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTMVHGHGGVVLGSEMSGSIRNITISNCIFQETD 260
Query: 309 VGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-----AGDVGDHP---DDKFNP--NA 358
GI +K+ GRGG + +I VS++ M+N + G G P + K P
Sbjct: 261 RGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYVWEKKAYPIDER 320
Query: 359 LPVVNGITIKDVWGTKVQQS-GLIQGLKNSPFTGICLSNINL 399
P I ++ V S G I GL I NI++
Sbjct: 321 TPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDV 362
>gi|393781486|ref|ZP_10369681.1| hypothetical protein HMPREF1071_00549 [Bacteroides salyersiae
CL02T12C01]
gi|392676549|gb|EIY69981.1| hypothetical protein HMPREF1071_00549 [Bacteroides salyersiae
CL02T12C01]
Length = 501
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 122/388 (31%), Positives = 180/388 (46%), Gaps = 59/388 (15%)
Query: 65 IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNW-PLIAPLPSYG 123
I GG +Y P G YLT + + S++TL + GA ++ + ++ P +
Sbjct: 48 IDEAAAEGGGTIYFPAGTYLTATIRMKSNITLDIESGATLRFSDRFEDYLPFV------- 100
Query: 124 RGRERPGGRYMS----FIHGDGLQDVVITGENGTIDGQGAIWW----------------- 162
+ R G M+ I+ D ++ ITG GT+DG G WW
Sbjct: 101 --KIRWEGTVMNTLSPLIYADNADNLTITGR-GTLDGNGFKWWAWEVDTRRLIKENGGKL 157
Query: 163 -------NMW--RQRTLPFT------------RPNLIEFMNSRSIIISNVIFQNSPFWNI 201
MW + L + RP I+F +I+I NV NSPFW I
Sbjct: 158 PSLNKLQQMWVDANKDLEISDYYKPSLERRMFRPPFIQFFECNNIVIENVKIINSPFWTI 217
Query: 202 HPVYCSNVVIRYVTILAPADSP---NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDE 258
+P +C N+ + VTI P+ +P NTDGI+P S SNV I D +IS GDD + +KSG D
Sbjct: 218 NPAFCDNITVHGVTINNPSKNPKGPNTDGINPTSCSNVRISDCFISVGDDCITIKSGRDA 277
Query: 259 YGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIG 318
G YG P +TI S G+ +GSE SGGV+ V + GI +K + G
Sbjct: 278 DGRKYGKPCQNLTITNCIMLSGHGGVVIGSEMSGGVKRVAISNCVFDGTDAGIRLKASRG 337
Query: 319 RGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQ 376
RGG + +I V ++ M+N + I D+ K P PV I + ++ G+ V+
Sbjct: 338 RGGVVEDIRVDNIVMKNIGRNAFIF-DLFYDKLSKPEPVSERTPVFRNIHLSNITGSDVK 396
Query: 377 QSGLIQGLKNSPFTGICLSNINLQGVAG 404
Q G I+G++ P + SNIN++ G
Sbjct: 397 QIGYIKGIEEMPINELSFSNINMEAEKG 424
>gi|167762022|ref|ZP_02434149.1| hypothetical protein BACSTE_00368 [Bacteroides stercoris ATCC
43183]
gi|167700114|gb|EDS16693.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 516
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 129/443 (29%), Positives = 194/443 (43%), Gaps = 84/443 (18%)
Query: 33 RYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTS 92
R+ + +++ +F VG+G+TL T AF +AI L GG L VP GV+LTG L S
Sbjct: 54 RFPDRTVNLKEFNAVGNGETLCTSAFADAI---NALSEQGGGHLVVPAGVWLTGPIVLKS 110
Query: 93 HMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENG 152
++ L+L KGAVI + D +PL+ + R R S I G L++V ITGE G
Sbjct: 111 NIDLHLEKGAVILFSPDVDLYPLVETVFEGLDTR-----RCQSPISGRNLENVAITGE-G 164
Query: 153 TIDGQGAIW---------WNMWRQRT----------------------------LP---- 171
IDG G W ++W+Q T +P
Sbjct: 165 AIDGNGHYWRPLKREKVTESVWKQTTARGGVYKRPTYWFPYPETLKGDTISNMNVPQNLK 224
Query: 172 ----------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 221
F RP ++ + +++ + VIFQNSP WN+HP+ C NV++ V + P+
Sbjct: 225 TEEEWQSVRHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLVEDVQVRNPSY 284
Query: 222 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 281
+ N DG+D +S N I +S GDD + +KSG DE G P + + T
Sbjct: 285 AQNGDGLDLESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRARPCENVVVDGCTVFKGH 344
Query: 282 SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM-------- 333
G VGSE SGGV NV + VG+ K+ GRGG + NI +++V M
Sbjct: 345 GGFVVGSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGIVENIWITNVSMMDIPTEPI 404
Query: 334 ------------ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLI 381
E G K+ V P D+ P I +K++ +++
Sbjct: 405 TFNLYYGGKSAVEVLESGEKVPAKVDPLPVDE----TTPCFRNIHVKNLVCAGARRALFF 460
Query: 382 QGLKNSPFTGICLSNINLQGVAG 404
G+ P + L ++++ G
Sbjct: 461 NGIPEMPIENVVLEDVDITSRLG 483
>gi|374376429|ref|ZP_09634087.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
gi|373233269|gb|EHP53064.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
Length = 517
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 128/436 (29%), Positives = 212/436 (48%), Gaps = 47/436 (10%)
Query: 41 ITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAK 100
+T +G + TKA + I +GG +Y P G YLTG +L S++T+ +
Sbjct: 25 VTKYGAKKNSSIKATKAIEKTI---TAAAAAGGGTVYFPAGKYLTGPIHLKSNITILIDA 81
Query: 101 GAVIKATQDTWNW-PLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGA 159
GA + + D ++ P++ R + + +G++++ ITG G IDG G
Sbjct: 82 GAELHFSDDFDDYLPMVE-----SRYEGVDVTSFSPLFYANGVENIAITGR-GVIDGHGK 135
Query: 160 IWWNM------------W-----------------RQRTLPFTRPNLIEFMNSRSIIISN 190
WW+ W RQ F RP I+F++S++I+I
Sbjct: 136 KWWDFVEGYKEGQPRTKWQLEFDRRNKNILLPDDPRQMKRGFLRPPFIQFLHSKNILIEG 195
Query: 191 VIFQNSPFWNIHPVYCSNVVIRYVTILAP-ADSPNTDGIDPDSSSNVCIEDSYISTGDDL 249
++ +NSPFW I+P +C NV + VTI P +++PNTDGI+P+S SNV I D +IS GDD
Sbjct: 196 IMIRNSPFWTINPGFCENVTVHAVTINNPGSNAPNTDGINPESCSNVHISDCHISVGDDC 255
Query: 250 VAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGV 309
+ +KSG D G + P+ TI T G+ +GSE SGGV+ + +
Sbjct: 256 ITIKSGKDIPGRSKNRPAENYTITNCTMLRGHGGVVIGSEMSGGVKKIAISNCIFDGTDR 315
Query: 310 GIHVKTNIGRGGFIRNITVSDVYMEN-ARKGIKIAGDVGDHPDDKFNPNALPVVNGITIK 368
GI +KT GRGG + +I VS++ M+N A + I + + ++ + P I +
Sbjct: 316 GIRIKTARGRGGVVEDIRVSNIVMKNIAEQAIVLDMEYAKGAEEPVSERT-PTFRNIRLS 374
Query: 369 DVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLK-CSDVSGSAYQVKPWPC 427
++ Q+ LI G++ P +GI L+++ + G LK +D+S + +++
Sbjct: 375 NITAY-TNQALLINGIREMPVSGISLNDVVFEARQGIV---LKNAADISLNNVKIRIPAG 430
Query: 428 SELSSSQQTGACSNHF 443
+ L + Q N+F
Sbjct: 431 TALKADQVERLDVNNF 446
>gi|325103049|ref|YP_004272703.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324971897|gb|ADY50881.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 526
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 119/368 (32%), Positives = 180/368 (48%), Gaps = 47/368 (12%)
Query: 72 GGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNW-PLIAPLPSYGRGRERPG 130
GG +Y P G YLTG +L S++T+++ GA + + + ++ P++ PS G E
Sbjct: 57 GGGTVYFPAGKYLTGPIHLKSNITIFIDAGAELHFSDNFDHYLPMV---PSRWEGTEVIN 113
Query: 131 GRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNM-------------WRQR--------- 168
+ + ++++ I G G IDG G WW W++
Sbjct: 114 --FSPLFYAKDVENIAIVGR-GLIDGHGKNWWRFSEVEVKKLTEDSKWQKEFKRLNPNVL 170
Query: 169 --TLP------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA 220
LP F RP I+FMN +++ I ++ QNSPFW I+P YC NV + +TI P
Sbjct: 171 APDLPGWIERGFLRPPFIQFMNCKNVQIKDIKIQNSPFWTINPQYCDNVTVDGITIDNPP 230
Query: 221 DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP 280
SPNTDGI+P+S NV I + +IS GDD + +KSG D G P+ TI T
Sbjct: 231 -SPNTDGINPESCRNVRIANCHISVGDDCITIKSGKDRSGRKVNIPAENYTITNCTMLRG 289
Query: 281 FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 340
G+ +GSE SGGV+N+ + GI +K+ GRGG + +I VS++ M N R
Sbjct: 290 HGGVVIGSEMSGGVKNIAITNCIFDGTDRGIRIKSARGRGGVVEDIRVSNIIMRNIRD-- 347
Query: 341 KIAGDVGDHPDDKFNPNAL----PVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 396
V D K NP + P+ I I D+ + ++G + GL+ P + I +N
Sbjct: 348 --QAIVLDLQYAKTNPEPISERTPIFRNIHISDITAS-TNRAGYLNGLEELPISNISFNN 404
Query: 397 INLQGVAG 404
+N+ G
Sbjct: 405 VNMTANTG 412
>gi|86143268|ref|ZP_01061670.1| exo-poly-alpha-D-galacturonosidase precursor [Leeuwenhoekiella
blandensis MED217]
gi|85830173|gb|EAQ48633.1| exo-poly-alpha-D-galacturonosidase precursor [Leeuwenhoekiella
blandensis MED217]
Length = 547
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 130/467 (27%), Positives = 204/467 (43%), Gaps = 73/467 (15%)
Query: 4 FLVTLSILLSYFNCFSLASVVT--CSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREA 61
L+TLS+ SL V I +++ + ITDFG GDG+ NT+AF +A
Sbjct: 11 LLITLSVNAQEMPLASLYDDVEFKMELITEPKFQETEYLITDFGAKGDGQFKNTEAFHKA 70
Query: 62 IYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPS 121
+ + GGT++ VP G++ TG L S++ L+L +GA+I + ++PL+ S
Sbjct: 71 FAKA--FSQGGGTVV-VPEGIWYTGPITLKSNINLHLKQGALILFSDQFDDYPLVET--S 125
Query: 122 YGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIW------------WN------ 163
Y R S I+ G +++ ITG+ G IDG G W WN
Sbjct: 126 Y---EGLKSARSTSPINALGAKNIAITGK-GIIDGNGGAWRPVKKSKMTQHQWNALVASG 181
Query: 164 --------MWR---------------------QRTLPFTRPNLIEFMNSRSIIISNVIFQ 194
+W Q F RP ++ ++ +I++ FQ
Sbjct: 182 GVLSDNKSVWYPDEAALKGSKSDLSDWTIEQLQTVRSFLRPVMVSLVDCENILLDGPTFQ 241
Query: 195 NSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKS 254
NSP WNIHP+ N+++R +T+ P + N DG+D +S NV + ++ GDD + +KS
Sbjct: 242 NSPAWNIHPLMSKNIIVRNLTVRNPWYAQNGDGLDLESCENVLVYNNTFDVGDDAICIKS 301
Query: 255 GWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVK 314
G +E G P+ + I+ T G VGSE SGGV + H N G+ K
Sbjct: 302 GKNEDGRKRNMPTQNVIIKNNTVYHGHGGFVVGSEMSGGVSKIHISHCNFIGTDTGLRFK 361
Query: 315 TNIGRGGFIRNITVSDVYMENAR------------KGIKIAGDVGDHPDDKFNPN---AL 359
+ GRGG + I +S +YM + + ++ D+ ++ +D+ P
Sbjct: 362 STRGRGGVVEQIYISHIYMNEIKTDAIRFNLYYGGQAPDLSNDLAENTEDRDVPEVTIET 421
Query: 360 PVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPT 406
P I I D+ K +SG GL + + N G G T
Sbjct: 422 PSFKDIYISDITSVKAHKSGFFMGLPEMNIQNVSIKNSLFHGEEGFT 468
>gi|227536102|ref|ZP_03966151.1| pectin lyase [Sphingobacterium spiritivorum ATCC 33300]
gi|227243999|gb|EEI94014.1| pectin lyase [Sphingobacterium spiritivorum ATCC 33300]
Length = 577
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 132/461 (28%), Positives = 197/461 (42%), Gaps = 78/461 (16%)
Query: 12 LSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRS 71
LS +N + + I + + D ISI FG GDG +LNT++ AI +
Sbjct: 40 LSSYNPAQAQTAPSLPSIKQVHVKADTISIVRFGAQGDGISLNTQSINRAI---AETSQK 96
Query: 72 GGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGG 131
GG ++ +P GV++TG L S++ L++ + A++ T D + L+ +P
Sbjct: 97 GGGVVLIPAGVWVTGPIELKSNINLHIQRDAILLFTDDFDQYKLVE-----ANWEGQPAW 151
Query: 132 RYMSFIHGDGLQDVVITGENGTIDGQGAIW------------W--------------NMW 165
R S I G L+++ ITG G IDG G W W N+W
Sbjct: 152 RNQSPISGSNLENIAITG-TGIIDGNGGAWRMVKKSKMTASQWKKLIESGGVLNDEKNIW 210
Query: 166 R--------------QRTLP------------FTRPNLIEFMNSRSIIISNVIFQNSPFW 199
+P F RPNL+ N + I++ V FQNSP W
Sbjct: 211 YPSASSLNGSKTKNPSAVVPGKTAADYADVKDFFRPNLLVLNNCKQILLEGVTFQNSPAW 270
Query: 200 NIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEY 259
N+HP+ C ++ +R V + P + N DGID +S NV +E+S GDD + +KSG DE
Sbjct: 271 NLHPLLCQDLTVRNVMVRNPWYAQNGDGIDIESCKNVLVENSTFDVGDDGICIKSGRDEA 330
Query: 260 GIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 319
G P+ + IR G +GSE SGG N+ + +G+ KT GR
Sbjct: 331 GRLRAVPTENVIIRNNVVYHAHGGFVIGSEMSGGARNIWVYDCSFIGTDIGLRFKTTRGR 390
Query: 320 GGFIRNITVS--------------DVYMENARKGIKIAGDVGDHPDDKFNP--NALPVVN 363
GG + NI + D+Y E A+ I + GD + P A P
Sbjct: 391 GGVVENIFIDRISMFDIPGEAILVDMYYE-AKDPIPLIGDKQEAVKAVTLPVTEATPQFR 449
Query: 364 GITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 404
IKDV ++ +GL G+ L NI+++ G
Sbjct: 450 NFKIKDVVVNGADKAIFFRGLPEMNIKGMSLENISIKSKKG 490
>gi|224536550|ref|ZP_03677089.1| hypothetical protein BACCELL_01425 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521806|gb|EEF90911.1| hypothetical protein BACCELL_01425 [Bacteroides cellulosilyticus
DSM 14838]
Length = 462
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 126/431 (29%), Positives = 206/431 (47%), Gaps = 51/431 (11%)
Query: 31 PMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVY-LTGSFN 89
P+ + + ITDFG VGDGKTL +AF +AI +GG + VP G Y + G
Sbjct: 39 PVTFPDKTYVITDFGAVGDGKTLCKEAFEKAITICSD---NGGGKITVPAGTYYMNGPLV 95
Query: 90 LTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSY-GRGRERPGGRYMSFIHGDGLQDVVIT 148
S++ ++L KGA++ + + ++ LP+ R Y I+ +Q++ +T
Sbjct: 96 FKSNVNVHLEKGAILDFSTNESDY-----LPAVITRWEGTELFNYSPLIYAYHVQNIALT 150
Query: 149 GENGTIDGQGAIWWNMWRQ---------RTLPFT---------------RPNLIEFMNSR 184
GE GT++G G+ ++ W R + T RP IE
Sbjct: 151 GE-GTVNGNGSKKFSPWNNIQTVEQEMLRKMGRTNVPVYRRIFGEGYKLRPGFIEPFGCA 209
Query: 185 SIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYIS 244
++ I V +SPFW IHP++C+NV++R VT+ + + N DG DP+S NV IE S
Sbjct: 210 NVRIEGVTIMDSPFWVIHPIFCNNVIVRNVTV--DSHNYNNDGCDPESCRNVLIEGCTFS 267
Query: 245 TGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINL 304
TGDD +A+KSG D G P+ + IR + S +G+ +GSE +GGV N+ E+I +
Sbjct: 268 TGDDAIAIKSGRDNDAWRIGQPTENVVIRNCSFRSKINGVCIGSEIAGGVRNIFIENITI 327
Query: 305 YNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNAL--PVV 362
I+ K+N+ RG +I+++ V +V + R + + P+ K +A +
Sbjct: 328 PKSSNAIYFKSNLDRGAYIQDVYVRNVQADTVRTAL-----IRFEPNYKGERSAFHPTLF 382
Query: 363 NGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINLQGVAGP------TSPPLKCSDV 415
+ I++V + + G+ + G P I L N+ + V P + + V
Sbjct: 383 DSFLIENVTCKQSNECGIYMAGFAERPLQNIVLKNVTIGKVPTPYCFQNGENIRFQSVKV 442
Query: 416 SGSAYQVKPWP 426
+G KP P
Sbjct: 443 NGKKLDEKPTP 453
>gi|383155083|gb|AFG59706.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155087|gb|AFG59708.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155089|gb|AFG59709.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155091|gb|AFG59710.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
Length = 138
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 81/138 (58%), Positives = 109/138 (78%)
Query: 239 EDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVL 298
ED Y+S GDD +A+KSGWDEYGI++ PSS I +RR+T S+PFSGIA+GSETSGG+ ++L
Sbjct: 1 EDCYVSNGDDGIAIKSGWDEYGISFNRPSSNIIVRRITISTPFSGIAIGSETSGGIRDIL 60
Query: 299 AEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNA 358
E+I++Y+ VGI VKTN+GRGG IRNIT S +Y++N GIK +G+ GDHPD ++NP A
Sbjct: 61 VENISIYSSTVGIRVKTNVGRGGIIRNITFSHIYLDNVGTGIKFSGNTGDHPDARYNPMA 120
Query: 359 LPVVNGITIKDVWGTKVQ 376
LPVV I + DV G+ ++
Sbjct: 121 LPVVGDIAVLDVVGSSIK 138
>gi|430854295|ref|ZP_19472011.1| polygalacturonase [Enterococcus faecium E1258]
gi|430539024|gb|ELA79287.1| polygalacturonase [Enterococcus faecium E1258]
Length = 445
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 115/342 (33%), Positives = 172/342 (50%), Gaps = 23/342 (6%)
Query: 72 GGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGG 131
GG + VP G +LTG+ L S++ L+L+ GAV+K + D ++P++ S G R
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVVH---SRWEGVHRK-- 84
Query: 132 RYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRT--LPFTRPNLIEFMNSRSIIIS 189
Y S I+ ++++ +TG GT+DG G WW+ +R + L + RP L+ F N I +
Sbjct: 85 VYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNESDNLAYPRPKLMSFHNCHRITVK 143
Query: 190 NVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDL 249
++ SP W I+P+ CSN +TIL PADSPNTDGIDP+S NV I + +I GDD
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 250 VAVKSGWDEYGIAYGH-PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVG 308
+A+K+G ++ Y ITI T G+ +GSE SG + N+ +
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTMVHGHGGVVLGSEMSGSIRNITISNCIFQETD 260
Query: 309 VGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-----AGDVGDHP---DDKFNP--NA 358
GI +K+ GRGG + +I VS++ M+N + G G P + K P
Sbjct: 261 RGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYVWEKKAYPIDER 320
Query: 359 LPVVNGITIKDVWGTKVQQS-GLIQGLKNSPFTGICLSNINL 399
P I ++ V S G I GL I NI++
Sbjct: 321 TPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDV 362
>gi|333382495|ref|ZP_08474165.1| hypothetical protein HMPREF9455_02331 [Dysgonomonas gadei ATCC
BAA-286]
gi|332828806|gb|EGK01498.1| hypothetical protein HMPREF9455_02331 [Dysgonomonas gadei ATCC
BAA-286]
Length = 545
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 115/351 (32%), Positives = 167/351 (47%), Gaps = 60/351 (17%)
Query: 34 YRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSH 93
+ ++K+SITDFGG+ DG TLNT AF +A+ L GG L+VP GV+ TG S+
Sbjct: 46 FPDNKVSITDFGGIPDGITLNTDAFAKAM---DALSNKGGGTLFVPSGVWYTGPIVFKSN 102
Query: 94 MTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGT 153
+ L+L KGA+I + D +PL+ + R R S I G L+++ ITGE G+
Sbjct: 103 INLHLEKGALILFSADFNLYPLVNTVFEGLDTR-----RCQSPISGRNLENIAITGE-GS 156
Query: 154 IDGQGAIW------------W-------------NMW------------RQRTLP----- 171
I+G G W W N W +P
Sbjct: 157 INGSGEAWRPLKKSKVTEIHWKKVINSGGVVKDGNYWFPSKGSLKGLEISDMNVPRHDLT 216
Query: 172 ---------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS 222
F RP ++ F+ +++++ V+F+NSP WNIHP+ C NV++ V + P +
Sbjct: 217 EAEWMEIKDFLRPVMVSFIECKNVLLEGVLFENSPSWNIHPLMCENVILDNVMVRNPGYA 276
Query: 223 PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS 282
N DG+D +S N I +S GDD + +KSG DE G P+ + I
Sbjct: 277 QNGDGLDLESCKNSIIVNSIFDVGDDAICIKSGKDEDGRRRNRPTENVLIDNCKVFQGHG 336
Query: 283 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
G VGSE SG V N+L + VG+ K+ GRGG + NI + D+ M
Sbjct: 337 GFVVGSEMSGSVRNILVSNCQFLGTDVGLRFKSCRGRGGVVENIYIRDINM 387
>gi|261406667|ref|YP_003242908.1| glycoside hydrolase family protein [Paenibacillus sp. Y412MC10]
gi|261283130|gb|ACX65101.1| glycoside hydrolase family 28 [Paenibacillus sp. Y412MC10]
Length = 523
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 128/423 (30%), Positives = 190/423 (44%), Gaps = 81/423 (19%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
++ITD+G VGDG NT+AF +AI + ++GG L +PPG++LTG L S + L+
Sbjct: 21 VTITDYGAVGDGVYDNTQAFHQAI---EACAKAGGGTLVIPPGIWLTGPIKLQSRIELHA 77
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
+ GA + ++ ++P+ L S GR+ R S + G+GL+DV ITG G DG G
Sbjct: 78 SAGAFVMFSKFFEDYPI---LMSTYEGRQM--FRCQSPLDGEGLEDVAITG-GGIFDGSG 131
Query: 159 AIWWNMWR---------------------------------QRTLP-------------- 171
W + R Q TL
Sbjct: 132 EAWRPVKRGKLTESQWERLIQSGGVVDDQGLWWPTPAARDGQETLDRIEQTGSEEPQDYE 191
Query: 172 ----FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDG 227
+ RPNL+ N + I++S FQNS W +HP + I+ +T+ P + N DG
Sbjct: 192 PVRDYLRPNLLSLRNCKRILLSGPTFQNSAAWCLHPWASEQITIQNITVRNPWYAQNGDG 251
Query: 228 IDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVG 287
+D DS V +E+S GDD + +KSG +E G G PS I+IR T GI VG
Sbjct: 252 LDIDSCKYVTVENSSFDVGDDAICLKSGKNEAGRLLGKPSERISIRNCTVYHGHGGIVVG 311
Query: 288 SETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV- 346
SE SGG+++V +GI K+ GRGG + NI + + M + I GD
Sbjct: 312 SEMSGGIKDVYVSDCTFIGTDIGIRFKSCRGRGGVVENILIERIRMRD------IDGDAI 365
Query: 347 ------------GDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGI 392
G++ ++ P PV I I+D+ + + LI GL P +
Sbjct: 366 SFNLYYEGKAGSGEYQEEVMLPVTEETPVFRNIVIQDIVCSGAHTALLINGLPEMPVENL 425
Query: 393 CLS 395
+
Sbjct: 426 TVK 428
>gi|431472772|ref|ZP_19514500.1| polygalacturonase [Enterococcus faecium E1630]
gi|431761402|ref|ZP_19549976.1| polygalacturonase [Enterococcus faecium E3346]
gi|430583557|gb|ELB21919.1| polygalacturonase [Enterococcus faecium E1630]
gi|430621543|gb|ELB58304.1| polygalacturonase [Enterococcus faecium E3346]
Length = 445
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 115/342 (33%), Positives = 171/342 (50%), Gaps = 23/342 (6%)
Query: 72 GGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGG 131
GG + VP G +LTG+ L S++ L+L+ GAV+K + D ++P++ S G R
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVVH---SRWEGVHRK-- 84
Query: 132 RYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQR--TLPFTRPNLIEFMNSRSIIIS 189
Y S I+ ++++ +TG GT+DG G WW+ +R L + RP L+ F N I +
Sbjct: 85 VYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 190 NVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDL 249
++ SP W I+P+ CSN +TIL PADSPNTDGIDP+S NV I + +I GDD
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 250 VAVKSGWDEYGIAYGH-PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVG 308
+A+K+G ++ Y ITI T G+ +GSE SG + N+ +
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTMVHGHGGVVLGSEMSGSIRNITISNCIFQETD 260
Query: 309 VGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-----AGDVGDHP---DDKFNP--NA 358
GI +K+ GRGG + +I VS++ M+N + G G P + K P
Sbjct: 261 RGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYVWEKKAYPIDER 320
Query: 359 LPVVNGITIKDVWGTKVQQS-GLIQGLKNSPFTGICLSNINL 399
P I ++ V S G I GL I NI++
Sbjct: 321 TPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDV 362
>gi|424907689|ref|ZP_18331159.1| polygalacturonase [Enterococcus faecium R497]
gi|425060672|ref|ZP_18463956.1| polygalacturonase [Enterococcus faecium 503]
gi|402930043|gb|EJX49746.1| polygalacturonase [Enterococcus faecium R497]
gi|403042383|gb|EJY53341.1| polygalacturonase [Enterococcus faecium 503]
Length = 445
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 115/342 (33%), Positives = 171/342 (50%), Gaps = 23/342 (6%)
Query: 72 GGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGG 131
GG + VP G +LTG+ L S++ L+L+ GAV+K + D ++P++ S G R
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVVH---SRWEGVHRK-- 84
Query: 132 RYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQR--TLPFTRPNLIEFMNSRSIIIS 189
Y S I+ ++++ +TG GT+DG G WW+ +R L + RP L+ F N I +
Sbjct: 85 VYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 190 NVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDL 249
++ SP W I+P+ CSN +TIL PADSPNTDGIDP+S NV I + +I GDD
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 250 VAVKSGWDEYGIAYGH-PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVG 308
+A+K+G ++ Y ITI T G+ +GSE SG + N+ +
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTMVHGHGGVVLGSEMSGSIRNITISNCIFQETD 260
Query: 309 VGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-----AGDVGDHP---DDKFNP--NA 358
GI +K+ GRGG + +I VS++ M+N + G G P + K P
Sbjct: 261 RGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYVWEKKAYPIDER 320
Query: 359 LPVVNGITIKDVWGTKVQQS-GLIQGLKNSPFTGICLSNINL 399
P I ++ V S G I GL I NI++
Sbjct: 321 TPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDV 362
>gi|430834097|ref|ZP_19452106.1| polygalacturonase [Enterococcus faecium E0679]
gi|430485620|gb|ELA62520.1| polygalacturonase [Enterococcus faecium E0679]
Length = 452
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/342 (33%), Positives = 171/342 (50%), Gaps = 23/342 (6%)
Query: 72 GGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGG 131
GG + VP G +LTG+ L S++ L+L+ GAV+K + D ++P++ S G R
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVVH---SRWEGVHRK-- 84
Query: 132 RYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQR--TLPFTRPNLIEFMNSRSIIIS 189
Y S I+ ++++ +TG GT+DG G WW+ +R L + RP L+ F N I +
Sbjct: 85 VYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 190 NVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDL 249
++ SP W I+P+ CSN +TIL PADSPNTDGIDP+S NV I + +I GDD
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 250 VAVKSGWDEYGIAYGH-PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVG 308
+A+K+G ++ Y ITI T G+ +GSE SG + N+ +
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTMVHGHGGVVLGSEMSGSIRNITISNCIFQETD 260
Query: 309 VGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-----AGDVGDHP---DDKFNP--NA 358
GI +K+ GRGG + +I VS++ M+N + G G P + K P
Sbjct: 261 RGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYVWEKKAYPIDER 320
Query: 359 LPVVNGITIKDVWGTKVQQS-GLIQGLKNSPFTGICLSNINL 399
P I ++ V S G I GL I NI++
Sbjct: 321 TPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDV 362
>gi|69244135|ref|ZP_00602671.1| Galacturan 1,4-alpha-galacturonidase [Enterococcus faecium DO]
gi|257880495|ref|ZP_05660148.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,230,933]
gi|257886384|ref|ZP_05666037.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,501]
gi|257891474|ref|ZP_05671127.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,410]
gi|257894583|ref|ZP_05674236.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,408]
gi|260562495|ref|ZP_05833005.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium C68]
gi|293559894|ref|ZP_06676406.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1162]
gi|293568212|ref|ZP_06679546.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1071]
gi|314938527|ref|ZP_07845812.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|314942455|ref|ZP_07849295.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|314949488|ref|ZP_07852823.1| polygalacturonase [Enterococcus faecium TX0082]
gi|314952932|ref|ZP_07855899.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|314992201|ref|ZP_07857644.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|314995242|ref|ZP_07860354.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|383329854|ref|YP_005355738.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|389869663|ref|YP_006377086.1| pectin lyase [Enterococcus faecium DO]
gi|406581497|ref|ZP_11056639.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|406583788|ref|ZP_11058833.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|406586132|ref|ZP_11061069.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|406591696|ref|ZP_11065942.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410936309|ref|ZP_11368176.1| pectin lyase [Enterococcus sp. GMD5E]
gi|415891706|ref|ZP_11549795.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4453]
gi|416141642|ref|ZP_11599435.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4452]
gi|424845976|ref|ZP_18270576.1| polygalacturonase [Enterococcus faecium R501]
gi|424854976|ref|ZP_18279307.1| polygalacturonase [Enterococcus faecium R499]
gi|424960548|ref|ZP_18375053.1| polygalacturonase [Enterococcus faecium P1986]
gi|424964739|ref|ZP_18378806.1| polygalacturonase [Enterococcus faecium P1190]
gi|424971119|ref|ZP_18384580.1| polygalacturonase [Enterococcus faecium P1139]
gi|424974622|ref|ZP_18387847.1| polygalacturonase [Enterococcus faecium P1137]
gi|424978117|ref|ZP_18391065.1| polygalacturonase [Enterococcus faecium P1123]
gi|424981120|ref|ZP_18393872.1| polygalacturonase [Enterococcus faecium ERV99]
gi|424983707|ref|ZP_18396282.1| polygalacturonase [Enterococcus faecium ERV69]
gi|424987493|ref|ZP_18399867.1| polygalacturonase [Enterococcus faecium ERV38]
gi|424990935|ref|ZP_18403122.1| polygalacturonase [Enterococcus faecium ERV26]
gi|425007173|ref|ZP_18418318.1| polygalacturonase [Enterococcus faecium ERV1]
gi|425014684|ref|ZP_18425349.1| polygalacturonase [Enterococcus faecium E417]
gi|425021605|ref|ZP_18431844.1| polygalacturonase [Enterococcus faecium C497]
gi|425023089|ref|ZP_18433228.1| polygalacturonase [Enterococcus faecium C1904]
gi|425034680|ref|ZP_18439557.1| polygalacturonase [Enterococcus faecium 514]
gi|425042053|ref|ZP_18446419.1| polygalacturonase [Enterococcus faecium 511]
gi|425046647|ref|ZP_18450644.1| polygalacturonase [Enterococcus faecium 510]
gi|425047911|ref|ZP_18451842.1| polygalacturonase [Enterococcus faecium 509]
gi|425051834|ref|ZP_18455475.1| polygalacturonase [Enterococcus faecium 506]
gi|427397520|ref|ZP_18890002.1| hypothetical protein HMPREF9307_02178 [Enterococcus durans
FB129-CNAB-4]
gi|430824500|ref|ZP_19443057.1| polygalacturonase [Enterococcus faecium E0120]
gi|430832640|ref|ZP_19450680.1| polygalacturonase [Enterococcus faecium E0333]
gi|430845579|ref|ZP_19463463.1| polygalacturonase [Enterococcus faecium E1050]
gi|430848400|ref|ZP_19466219.1| polygalacturonase [Enterococcus faecium E1133]
gi|430856194|ref|ZP_19473897.1| polygalacturonase [Enterococcus faecium E1392]
gi|430868562|ref|ZP_19482856.1| polygalacturonase [Enterococcus faecium E1574]
gi|430968703|ref|ZP_19487864.1| polygalacturonase [Enterococcus faecium E1576]
gi|431017544|ref|ZP_19490421.1| polygalacturonase [Enterococcus faecium E1578]
gi|431243672|ref|ZP_19503845.1| polygalacturonase [Enterococcus faecium E1622]
gi|431261230|ref|ZP_19505727.1| polygalacturonase [Enterococcus faecium E1623]
gi|431323325|ref|ZP_19509129.1| polygalacturonase [Enterococcus faecium E1626]
gi|431388088|ref|ZP_19511694.1| polygalacturonase [Enterococcus faecium E1627]
gi|431520927|ref|ZP_19516641.1| polygalacturonase [Enterococcus faecium E1634]
gi|431565473|ref|ZP_19519835.1| polygalacturonase [Enterococcus faecium E1731]
gi|431744393|ref|ZP_19533261.1| polygalacturonase [Enterococcus faecium E2071]
gi|431747806|ref|ZP_19536575.1| polygalacturonase [Enterococcus faecium E2134]
gi|431750363|ref|ZP_19539082.1| polygalacturonase [Enterococcus faecium E2297]
gi|431755429|ref|ZP_19544078.1| polygalacturonase [Enterococcus faecium E2883]
gi|431769096|ref|ZP_19557524.1| polygalacturonase [Enterococcus faecium E1321]
gi|431771659|ref|ZP_19560039.1| polygalacturonase [Enterococcus faecium E1644]
gi|431774529|ref|ZP_19562836.1| polygalacturonase [Enterococcus faecium E2369]
gi|431780636|ref|ZP_19568809.1| polygalacturonase [Enterococcus faecium E4389]
gi|447913741|ref|YP_007395153.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
gi|68196592|gb|EAN11018.1| Galacturan 1,4-alpha-galacturonidase [Enterococcus faecium DO]
gi|257814723|gb|EEV43481.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,230,933]
gi|257822240|gb|EEV49370.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,501]
gi|257827834|gb|EEV54460.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,410]
gi|257830962|gb|EEV57569.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,408]
gi|260073180|gb|EEW61525.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium C68]
gi|291589112|gb|EFF20926.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1071]
gi|291606166|gb|EFF35588.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1162]
gi|313590498|gb|EFR69343.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|313593259|gb|EFR72104.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|313595004|gb|EFR73849.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|313598763|gb|EFR77608.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|313642155|gb|EFS06735.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|313644102|gb|EFS08682.1| polygalacturonase [Enterococcus faecium TX0082]
gi|364090036|gb|EHM32668.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4452]
gi|364093766|gb|EHM36003.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4453]
gi|378939548|gb|AFC64620.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|388534912|gb|AFK60104.1| pectin lyase [Enterococcus faecium DO]
gi|402919804|gb|EJX40370.1| polygalacturonase [Enterococcus faecium R501]
gi|402931909|gb|EJX51460.1| polygalacturonase [Enterococcus faecium R499]
gi|402945957|gb|EJX64277.1| polygalacturonase [Enterococcus faecium P1190]
gi|402947330|gb|EJX65549.1| polygalacturonase [Enterococcus faecium P1986]
gi|402955965|gb|EJX73454.1| polygalacturonase [Enterococcus faecium P1137]
gi|402959987|gb|EJX77180.1| polygalacturonase [Enterococcus faecium P1139]
gi|402963038|gb|EJX79936.1| polygalacturonase [Enterococcus faecium P1123]
gi|402964595|gb|EJX81367.1| polygalacturonase [Enterococcus faecium ERV99]
gi|402970840|gb|EJX87153.1| polygalacturonase [Enterococcus faecium ERV69]
gi|402974315|gb|EJX90374.1| polygalacturonase [Enterococcus faecium ERV38]
gi|402978299|gb|EJX94052.1| polygalacturonase [Enterococcus faecium ERV26]
gi|402995607|gb|EJY10050.1| polygalacturonase [Enterococcus faecium ERV1]
gi|402997994|gb|EJY12279.1| polygalacturonase [Enterococcus faecium E417]
gi|403006146|gb|EJY19813.1| polygalacturonase [Enterococcus faecium C497]
gi|403010843|gb|EJY24188.1| polygalacturonase [Enterococcus faecium C1904]
gi|403019826|gb|EJY32405.1| polygalacturonase [Enterococcus faecium 514]
gi|403023540|gb|EJY35785.1| polygalacturonase [Enterococcus faecium 510]
gi|403024463|gb|EJY36619.1| polygalacturonase [Enterococcus faecium 511]
gi|403032239|gb|EJY43807.1| polygalacturonase [Enterococcus faecium 509]
gi|403036560|gb|EJY47906.1| polygalacturonase [Enterococcus faecium 506]
gi|404452556|gb|EJZ99740.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|404456111|gb|EKA02868.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|404461640|gb|EKA07534.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|404467219|gb|EKA12401.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410735255|gb|EKQ77169.1| pectin lyase [Enterococcus sp. GMD5E]
gi|425722196|gb|EKU85093.1| hypothetical protein HMPREF9307_02178 [Enterococcus durans
FB129-CNAB-4]
gi|430441028|gb|ELA51171.1| polygalacturonase [Enterococcus faecium E0120]
gi|430479695|gb|ELA56911.1| polygalacturonase [Enterococcus faecium E0333]
gi|430495386|gb|ELA71561.1| polygalacturonase [Enterococcus faecium E1050]
gi|430534971|gb|ELA75396.1| polygalacturonase [Enterococcus faecium E1133]
gi|430545280|gb|ELA85263.1| polygalacturonase [Enterococcus faecium E1392]
gi|430548826|gb|ELA88674.1| polygalacturonase [Enterococcus faecium E1574]
gi|430554873|gb|ELA94441.1| polygalacturonase [Enterococcus faecium E1576]
gi|430559243|gb|ELA98603.1| polygalacturonase [Enterococcus faecium E1578]
gi|430571641|gb|ELB10527.1| polygalacturonase [Enterococcus faecium E1622]
gi|430576635|gb|ELB15272.1| polygalacturonase [Enterococcus faecium E1623]
gi|430577973|gb|ELB16549.1| polygalacturonase [Enterococcus faecium E1626]
gi|430580353|gb|ELB18826.1| polygalacturonase [Enterococcus faecium E1627]
gi|430585070|gb|ELB23371.1| polygalacturonase [Enterococcus faecium E1634]
gi|430589382|gb|ELB27511.1| polygalacturonase [Enterococcus faecium E1731]
gi|430604693|gb|ELB42128.1| polygalacturonase [Enterococcus faecium E2134]
gi|430605136|gb|ELB42541.1| polygalacturonase [Enterococcus faecium E2071]
gi|430609790|gb|ELB46967.1| polygalacturonase [Enterococcus faecium E2297]
gi|430616651|gb|ELB53546.1| polygalacturonase [Enterococcus faecium E2883]
gi|430628012|gb|ELB64470.1| polygalacturonase [Enterococcus faecium E1321]
gi|430632933|gb|ELB69123.1| polygalacturonase [Enterococcus faecium E1644]
gi|430633934|gb|ELB70079.1| polygalacturonase [Enterococcus faecium E2369]
gi|430639091|gb|ELB74973.1| polygalacturonase [Enterococcus faecium E4389]
gi|445189450|gb|AGE31092.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
Length = 445
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/342 (33%), Positives = 171/342 (50%), Gaps = 23/342 (6%)
Query: 72 GGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGG 131
GG + VP G +LTG+ L S++ L+L+ GAV+K + D ++P++ S G R
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVVH---SRWEGVHRK-- 84
Query: 132 RYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQR--TLPFTRPNLIEFMNSRSIIIS 189
Y S I+ ++++ +TG GT+DG G WW+ +R L + RP L+ F N I +
Sbjct: 85 VYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 190 NVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDL 249
++ SP W I+P+ CSN +TIL PADSPNTDGIDP+S NV I + +I GDD
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 250 VAVKSGWDEYGIAYGH-PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVG 308
+A+K+G ++ Y ITI T G+ +GSE SG + N+ +
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTMVHGHGGVVLGSEMSGSIRNITISNCIFQETD 260
Query: 309 VGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-----AGDVGDHP---DDKFNP--NA 358
GI +K+ GRGG + +I VS++ M+N + G G P + K P
Sbjct: 261 RGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYVWEKKAYPIDER 320
Query: 359 LPVVNGITIKDVWGTKVQQS-GLIQGLKNSPFTGICLSNINL 399
P I ++ V S G I GL I NI++
Sbjct: 321 TPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDV 362
>gi|425055000|ref|ZP_18458495.1| polygalacturonase [Enterococcus faecium 505]
gi|403034850|gb|EJY46272.1| polygalacturonase [Enterococcus faecium 505]
Length = 445
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/268 (36%), Positives = 150/268 (55%), Gaps = 12/268 (4%)
Query: 71 SGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPG 130
+GG + VP G +LTG+ L S++ L+L+ GAV+K + D ++P++ S G R
Sbjct: 29 AGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPIVH---SRWEGVHRK- 84
Query: 131 GRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQR--TLPFTRPNLIEFMNSRSIII 188
Y S I+ ++++ +TG GT+DG G WW+ +R L + RP L+ F N I +
Sbjct: 85 -VYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITV 142
Query: 189 SNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDD 248
++ SP W I+P+ CSN +TIL PADSPNTDGIDP+S NV I + +I GDD
Sbjct: 143 KDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDD 202
Query: 249 LVAVKSGWDEYGIAYGH-PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNV 307
+A+K+G ++ Y ITI T G+ +GSE SG + N+ +
Sbjct: 203 CIAIKAGTED---TYERIACENITITNCTMVHGHGGVVLGSEMSGSIRNITISNCIFQET 259
Query: 308 GVGIHVKTNIGRGGFIRNITVSDVYMEN 335
GI +K+ GRGG + +I VS++ M+N
Sbjct: 260 DRGIRLKSRRGRGGIVEDIRVSNIVMDN 287
>gi|227550311|ref|ZP_03980360.1| pectin lyase [Enterococcus faecium TX1330]
gi|257897632|ref|ZP_05677285.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium Com12]
gi|293379031|ref|ZP_06625184.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
gi|424764556|ref|ZP_18191976.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|431758788|ref|ZP_19547411.1| polygalacturonase [Enterococcus faecium E3083]
gi|227180571|gb|EEI61543.1| pectin lyase [Enterococcus faecium TX1330]
gi|257834197|gb|EEV60618.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium Com12]
gi|292642310|gb|EFF60467.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
gi|402419039|gb|EJV51323.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|430616603|gb|ELB53499.1| polygalacturonase [Enterococcus faecium E3083]
Length = 445
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/268 (36%), Positives = 150/268 (55%), Gaps = 12/268 (4%)
Query: 71 SGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPG 130
+GG + VP G +LTG+ L S++ L+L+ GAV+K + D ++P++ S G R
Sbjct: 29 AGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPIVH---SRWEGVHRK- 84
Query: 131 GRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQR--TLPFTRPNLIEFMNSRSIII 188
Y S I+ ++++ +TG GT+DG G WW+ +R L + RP L+ F N I +
Sbjct: 85 -VYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITV 142
Query: 189 SNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDD 248
++ SP W I+P+ CSN +TIL PADSPNTDGIDP+S NV I + +I GDD
Sbjct: 143 KDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDD 202
Query: 249 LVAVKSGWDEYGIAYGH-PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNV 307
+A+K+G ++ Y ITI T G+ +GSE SG + N+ +
Sbjct: 203 CIAIKAGTED---TYERIACENITITNCTMVHGHGGVVLGSEMSGSIRNITISNCIFQET 259
Query: 308 GVGIHVKTNIGRGGFIRNITVSDVYMEN 335
GI +K+ GRGG + +I VS++ M+N
Sbjct: 260 DRGIRLKSRRGRGGIVEDIRVSNIVMDN 287
>gi|427384860|ref|ZP_18881365.1| hypothetical protein HMPREF9447_02398 [Bacteroides oleiciplenus YIT
12058]
gi|425728121|gb|EKU90980.1| hypothetical protein HMPREF9447_02398 [Bacteroides oleiciplenus YIT
12058]
Length = 462
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 122/404 (30%), Positives = 197/404 (48%), Gaps = 45/404 (11%)
Query: 31 PMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVY-LTGSFN 89
P+ + + ITDFG VGDGKTL + F +AI +GG + VP G Y + G
Sbjct: 39 PVTFPDKTYIITDFGAVGDGKTLCKEPFEKAITICSD---NGGGKITVPAGTYYMNGPLV 95
Query: 90 LTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSY-GRGRERPGGRYMSFIHGDGLQDVVIT 148
S++ ++L KGA++ + + ++ LP+ R Y I+ +Q++ +T
Sbjct: 96 FKSNVNVHLEKGAILDFSTNESDY-----LPAVITRWEGTELFNYSPLIYAYHVQNIALT 150
Query: 149 GENGTIDGQGAIWWNMWRQ---------RTLPFT---------------RPNLIEFMNSR 184
GE GT++G G+ ++ W R + T RP IE
Sbjct: 151 GE-GTVNGNGSKKFSPWNNIQTVEQEMLRKMGRTNVPVYRRVFGEGYKLRPGFIEPFGCA 209
Query: 185 SIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYIS 244
++ I V +SPFW IHP++CSNV++R VT+ + + N DG DP+S NV IE S
Sbjct: 210 NVRIEGVTIIDSPFWVIHPIFCSNVIVRNVTV--DSHNYNNDGCDPESCRNVLIEGCTFS 267
Query: 245 TGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINL 304
TGDD +A+KSG D G P+ + IR + S +G+ +GSE +GGV N+ E+I +
Sbjct: 268 TGDDAIAIKSGRDNDAWRIGQPTENVVIRNCSFRSKINGVCIGSEIAGGVRNIFIENITI 327
Query: 305 YNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNAL--PVV 362
I+ K+N+ RG +I+++ V +V + R + + P+ K +A +
Sbjct: 328 PKSSNAIYFKSNLDRGAYIQDVYVRNVQADTVRTAL-----IRFEPNYKGERSAFHPTLF 382
Query: 363 NGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINLQGVAGP 405
N I++V + + G+ + G P I L N+ + V P
Sbjct: 383 NSFLIENVTCKQSNECGIYMAGFAERPLQNIVLKNVTIGKVPTP 426
>gi|427384333|ref|ZP_18880838.1| hypothetical protein HMPREF9447_01871 [Bacteroides oleiciplenus YIT
12058]
gi|425727594|gb|EKU90453.1| hypothetical protein HMPREF9447_01871 [Bacteroides oleiciplenus YIT
12058]
Length = 506
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 133/439 (30%), Positives = 200/439 (45%), Gaps = 76/439 (17%)
Query: 33 RYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTS 92
++ + K+++ DFG VG+G+ L T+AF +AI L GG L VP GV+ TG L S
Sbjct: 44 KFPDRKVNLADFGAVGNGEELCTEAFAKAI---DALAEKGGGHLIVPAGVWFTGPIVLKS 100
Query: 93 HMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENG 152
++ L+L KGA+I + + +PL+ + R R S + G L++V ITGE G
Sbjct: 101 NIDLHLEKGAIILFSPNVDLYPLVETVFEGLDTR-----RCQSPVSGRNLENVAITGE-G 154
Query: 153 TIDGQGAIW---------WNMWRQ------------------RTLP-------------- 171
IDG G W ++W+Q +TL
Sbjct: 155 AIDGNGHYWRPLKREKVTESVWKQTIARGGVYKRPTYWFPYPQTLKGDTISNMNVPQNLK 214
Query: 172 ----------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 221
F RP ++ + +++ + VIFQNSP WN+HP+ C NV+I V + P+
Sbjct: 215 SEEEWQSVRHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLIEEVQVRNPSY 274
Query: 222 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 281
+ N DG+D +S N I +S GDD + +KSG DE G G + + T
Sbjct: 275 AQNGDGLDLESCKNTLIVNSTFDVGDDGICLKSGKDEDGRIRGRVCENVVVDGCTVFKGH 334
Query: 282 SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGG-----FIRNITVSDVYME-- 334
G VGSE SGGV NV + VG+ K+ GRGG +IRNI++ D+ E
Sbjct: 335 GGFVVGSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWIRNISMIDIPTEPI 394
Query: 335 --NARKGIKIAGDV---GDHPDDKFNP----NALPVVNGITIKDVWGTKVQQSGLIQGLK 385
N G K A +V G+ K P P I ++++ +++ G+
Sbjct: 395 TFNLYYGGKSAVEVLESGEVVPAKVEPMPVDETTPCFRNIHVENLVCAGARRALFFNGIP 454
Query: 386 NSPFTGICLSNINLQGVAG 404
P GI L N+++ G
Sbjct: 455 EMPIDGITLKNVDISSKLG 473
>gi|257883307|ref|ZP_05662960.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,502]
gi|294622157|ref|ZP_06701229.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium U0317]
gi|424791201|ref|ZP_18217679.1| polygalacturonase [Enterococcus faecium V689]
gi|424796708|ref|ZP_18222399.1| polygalacturonase [Enterococcus faecium S447]
gi|424949492|ref|ZP_18365160.1| polygalacturonase [Enterococcus faecium R496]
gi|424953665|ref|ZP_18368614.1| polygalacturonase [Enterococcus faecium R494]
gi|424956671|ref|ZP_18371436.1| polygalacturonase [Enterococcus faecium R446]
gi|424968083|ref|ZP_18381741.1| polygalacturonase [Enterococcus faecium P1140]
gi|424994459|ref|ZP_18406396.1| polygalacturonase [Enterococcus faecium ERV168]
gi|424998609|ref|ZP_18410283.1| polygalacturonase [Enterococcus faecium ERV165]
gi|425001105|ref|ZP_18412635.1| polygalacturonase [Enterococcus faecium ERV161]
gi|425005198|ref|ZP_18416463.1| polygalacturonase [Enterococcus faecium ERV102]
gi|425011663|ref|ZP_18422546.1| polygalacturonase [Enterococcus faecium E422]
gi|425017819|ref|ZP_18428304.1| polygalacturonase [Enterococcus faecium C621]
gi|425032259|ref|ZP_18437327.1| polygalacturonase [Enterococcus faecium 515]
gi|425039369|ref|ZP_18443912.1| polygalacturonase [Enterococcus faecium 513]
gi|431777897|ref|ZP_19566138.1| polygalacturonase [Enterococcus faecium E2560]
gi|431783614|ref|ZP_19571712.1| polygalacturonase [Enterococcus faecium E6012]
gi|431786798|ref|ZP_19574796.1| polygalacturonase [Enterococcus faecium E6045]
gi|257818965|gb|EEV46293.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,502]
gi|291598326|gb|EFF29415.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium U0317]
gi|402919867|gb|EJX40428.1| polygalacturonase [Enterococcus faecium V689]
gi|402922635|gb|EJX42996.1| polygalacturonase [Enterococcus faecium S447]
gi|402934197|gb|EJX53567.1| polygalacturonase [Enterococcus faecium R496]
gi|402938569|gb|EJX57565.1| polygalacturonase [Enterococcus faecium R494]
gi|402945367|gb|EJX63722.1| polygalacturonase [Enterococcus faecium R446]
gi|402952945|gb|EJX70709.1| polygalacturonase [Enterococcus faecium P1140]
gi|402980034|gb|EJX95667.1| polygalacturonase [Enterococcus faecium ERV168]
gi|402982456|gb|EJX97919.1| polygalacturonase [Enterococcus faecium ERV165]
gi|402987170|gb|EJY02259.1| polygalacturonase [Enterococcus faecium ERV102]
gi|402987432|gb|EJY02495.1| polygalacturonase [Enterococcus faecium ERV161]
gi|402995999|gb|EJY10409.1| polygalacturonase [Enterococcus faecium E422]
gi|403003645|gb|EJY17529.1| polygalacturonase [Enterococcus faecium C621]
gi|403013568|gb|EJY26654.1| polygalacturonase [Enterococcus faecium 515]
gi|403016115|gb|EJY28950.1| polygalacturonase [Enterococcus faecium 513]
gi|430638501|gb|ELB74432.1| polygalacturonase [Enterococcus faecium E2560]
gi|430644798|gb|ELB80379.1| polygalacturonase [Enterococcus faecium E6012]
gi|430644949|gb|ELB80513.1| polygalacturonase [Enterococcus faecium E6045]
Length = 445
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/267 (37%), Positives = 149/267 (55%), Gaps = 12/267 (4%)
Query: 72 GGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGG 131
GG + VP G +LTG+ L S++ L+L+ GAV+K + D ++P++ S G R
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVVH---SRWEGVHRK-- 84
Query: 132 RYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQR--TLPFTRPNLIEFMNSRSIIIS 189
Y S I+ ++++ +TG GT+DG G WW+ +R L + RP L+ F N I +
Sbjct: 85 VYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 190 NVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDL 249
++ SP W I+P+ CSN +TIL PADSPNTDGIDP+S NV I + +I GDD
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 250 VAVKSGWDEYGIAYGH-PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVG 308
+A+K+G ++ Y ITI T G+ +GSE SG + N+ +
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTMVHGHGGVVLGSEMSGSIRNITISNCIFQETD 260
Query: 309 VGIHVKTNIGRGGFIRNITVSDVYMEN 335
GI +K+ GRGG + +I VS++ M+N
Sbjct: 261 RGIRLKSRRGRGGIVEDIRVSNIVMDN 287
>gi|423223595|ref|ZP_17210064.1| hypothetical protein HMPREF1062_02250 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638220|gb|EIY32067.1| hypothetical protein HMPREF1062_02250 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 491
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 122/400 (30%), Positives = 188/400 (47%), Gaps = 56/400 (14%)
Query: 65 IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGR 124
I+ GG +Y P G YLT + ++ S++TL+L GA+++ + ++ LP
Sbjct: 45 IEKAASEGGGTIYFPAGTYLTATIHMKSNITLHLESGAIVRFSDRFEDY-----LPFVTA 99
Query: 125 GRERPGGRYMS-FIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRT----------LP-- 171
E + +S I+ ++ ITG GT+DG G WW +W T LP
Sbjct: 100 RWEGTVMQTLSPLIYAHSADNLTITGR-GTLDGNGLKWW-LWEFETRKVIKENGGKLPSL 157
Query: 172 ---------------------------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPV 204
RP I+F +I+I NV NSPFW ++P
Sbjct: 158 DKLQQMWVDANKDLEISDYYKPSLERKMFRPPFIQFYECTNILIENVKIINSPFWTVNPA 217
Query: 205 YCSNVVIRYVTILAPADSP---NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 261
+C NV I VTI P+ +P NTDGI+P S NV I D +IS GDD + +KSG D G
Sbjct: 218 FCDNVTIHGVTINNPSSNPKGPNTDGINPSSCRNVRISDCFISVGDDCITIKSGRDADGR 277
Query: 262 AYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGG 321
YG ITI S G+ +GSE SGGV+ + + GI +K + GRGG
Sbjct: 278 KYGKACENITITNCIMLSGHGGVVIGSEMSGGVKRIAISNCVFDGTNAGIRLKASRGRGG 337
Query: 322 FIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSG 379
+ +I V ++ M+N +G D+ K P P+ I + +V G +++ G
Sbjct: 338 VVEDIRVDNIVMKNI-QGDAFIFDLFYDRLSKVEPVSERTPIFRNIHLSNVTGNDIKRIG 396
Query: 380 LIQGLKNSPFTGICLSNINL---QGVAGPTSPPLKCSDVS 416
I+G++ P + + SN+N+ +G T+ ++ ++VS
Sbjct: 397 YIKGIEEMPISELSFSNMNIVAGKGFQAETATDIRFNNVS 436
>gi|361067449|gb|AEW08036.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155067|gb|AFG59698.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155071|gb|AFG59700.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
Length = 138
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 80/138 (57%), Positives = 109/138 (78%)
Query: 239 EDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVL 298
ED Y+S GDD +A+KSGWDEYGI++ PSS I +RR+T S+PFSGIA+GSETSGG+ ++L
Sbjct: 1 EDCYVSNGDDGIAIKSGWDEYGISFNRPSSNIIVRRITISTPFSGIAIGSETSGGIRDIL 60
Query: 299 AEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNA 358
E+I++Y+ VGI VKTN+GRGG IRNIT S +Y++N GIK +G+ GDHPD ++NP A
Sbjct: 61 VENISIYSSSVGIRVKTNVGRGGIIRNITFSHIYLDNVGTGIKFSGNTGDHPDARYNPMA 120
Query: 359 LPVVNGITIKDVWGTKVQ 376
LPVV I + +V G+ ++
Sbjct: 121 LPVVGDIAVLNVVGSSIK 138
>gi|224536535|ref|ZP_03677074.1| hypothetical protein BACCELL_01410 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521791|gb|EEF90896.1| hypothetical protein BACCELL_01410 [Bacteroides cellulosilyticus
DSM 14838]
Length = 491
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 122/400 (30%), Positives = 188/400 (47%), Gaps = 56/400 (14%)
Query: 65 IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGR 124
I+ GG +Y P G YLT + ++ S++TL+L GA+++ + ++ LP
Sbjct: 45 IEKAASEGGGTIYFPAGTYLTATIHMKSNITLHLESGAIVRFSDRFEDY-----LPFVTA 99
Query: 125 GRERPGGRYMS-FIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRT----------LP-- 171
E + +S I+ ++ ITG GT+DG G WW +W T LP
Sbjct: 100 RWEGTVMQTLSPLIYAHSADNLTITGR-GTLDGNGLKWW-LWEFETRKVIKENGGKLPSL 157
Query: 172 ---------------------------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPV 204
RP I+F +I+I NV NSPFW ++P
Sbjct: 158 DKLQQMWVDANNDLEISDYYKPSLERKMFRPPFIQFYECTNILIENVKIINSPFWTVNPA 217
Query: 205 YCSNVVIRYVTILAPADSP---NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 261
+C NV I VTI P+ +P NTDGI+P S NV I D +IS GDD + +KSG D G
Sbjct: 218 FCDNVTIHGVTINNPSSNPKGPNTDGINPSSCRNVRISDCFISVGDDCITIKSGRDADGR 277
Query: 262 AYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGG 321
YG ITI S G+ +GSE SGGV+ + + GI +K + GRGG
Sbjct: 278 KYGKACENITITNCIMLSGHGGVVIGSEMSGGVKRIAISNCVFDGTNAGIRLKASRGRGG 337
Query: 322 FIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSG 379
+ +I V ++ M+N +G D+ K P P+ I + +V G +++ G
Sbjct: 338 VVEDIRVDNIVMKNI-QGDAFIFDLFYDRLSKVEPVSERTPIFRNIHLSNVTGNDIKRIG 396
Query: 380 LIQGLKNSPFTGICLSNINL---QGVAGPTSPPLKCSDVS 416
I+G++ P + + SN+N+ +G T+ ++ ++VS
Sbjct: 397 YIKGIEEMPISELSFSNMNIVAGKGFQAETATDIRFNNVS 436
>gi|430821816|ref|ZP_19440403.1| polygalacturonase [Enterococcus faecium E0045]
gi|430830077|ref|ZP_19448143.1| polygalacturonase [Enterococcus faecium E0269]
gi|430921162|ref|ZP_19485329.1| polygalacturonase [Enterococcus faecium E1575]
gi|431703882|ref|ZP_19525108.1| polygalacturonase [Enterococcus faecium E1904]
gi|431766532|ref|ZP_19555009.1| polygalacturonase [Enterococcus faecium E4215]
gi|430438088|gb|ELA48576.1| polygalacturonase [Enterococcus faecium E0045]
gi|430479132|gb|ELA56406.1| polygalacturonase [Enterococcus faecium E0269]
gi|430554055|gb|ELA93727.1| polygalacturonase [Enterococcus faecium E1575]
gi|430596728|gb|ELB34544.1| polygalacturonase [Enterococcus faecium E1904]
gi|430626092|gb|ELB62680.1| polygalacturonase [Enterococcus faecium E4215]
Length = 445
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/267 (37%), Positives = 149/267 (55%), Gaps = 12/267 (4%)
Query: 72 GGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGG 131
GG + VP G +LTG+ L S++ L+L+ GAV+K + D ++P++ S G R
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVVH---SRWEGVHRK-- 84
Query: 132 RYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQR--TLPFTRPNLIEFMNSRSIIIS 189
Y S I+ ++++ +TG GT+DG G WW+ +R L + RP L+ F N I +
Sbjct: 85 VYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 190 NVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDL 249
++ SP W I+P+ CSN +TIL PADSPNTDGIDP+S NV I + +I GDD
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 250 VAVKSGWDEYGIAYGH-PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVG 308
+A+K+G ++ Y ITI T G+ +GSE SG + N+ +
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTMVHGHGGVVLGSEMSGSIRNITISNCIFQETD 260
Query: 309 VGIHVKTNIGRGGFIRNITVSDVYMEN 335
GI +K+ GRGG + +I VS++ M+N
Sbjct: 261 RGIRLKSRRGRGGIVEDIRVSNIVMDN 287
>gi|374313032|ref|YP_005059462.1| Polygalacturonase [Granulicella mallensis MP5ACTX8]
gi|358755042|gb|AEU38432.1| Polygalacturonase [Granulicella mallensis MP5ACTX8]
Length = 420
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 132/403 (32%), Positives = 199/403 (49%), Gaps = 35/403 (8%)
Query: 18 FSLASVVTCSGIVPMRYRNDKI-SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLL 76
F+ V +VP + K + FG GDG T +T A ++AI ++ G ++
Sbjct: 3 FAALMGVVALAVVPQAWGVAKTCDVRAFGAKGDGTTKDTVAIQKAIDTCAGYKKGG--VV 60
Query: 77 YVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSF 136
+ G++L+G +L S++TL +A+GA + + D ++P + ++ R +P
Sbjct: 61 KLSGGIFLSGPISLKSNITLDIAEGATLLGSPDREDYPKV----TFAR---QP--TVQPL 111
Query: 137 IHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLP------FTRPNLIEFMNSRSIIISN 190
+ +++ ITG GTIDG G IWW RP + F +S+ I +
Sbjct: 112 VGSVNAENITITG-GGTIDGNGHIWWEYVHAVKEAGVLGNDHPRPMGLVFDHSKHIRVEG 170
Query: 191 VIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLV 250
+ QN+ FW I P Y ++V R + ILAP SPNTD IDP SSSN+ I+ + S GDD V
Sbjct: 171 ITVQNAGFWQIVPYYADDLVFRNLKILAP-HSPNTDAIDPFSSSNIVIDHVFSSVGDDNV 229
Query: 251 AVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVG 310
A+KSG PS ITI T + G+++GSE +GGV+NV AE I+ G
Sbjct: 230 AIKSGAIN-SPGPDAPSKNITITDCTFENGH-GLSIGSEIAGGVQNVHAERIHFKGTDQG 287
Query: 311 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIA---------GDVGDHPDDKFNPNALPV 361
I +K N RG + NI+ D+ M + + I I G+V P + P
Sbjct: 288 IRIKANRDRGNDVSNISFKDIDMVDVKTAILITEYYPKAAPDGEVPSMPMGRLTPR---- 343
Query: 362 VNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 404
+ I I++V T +G I GL SP G+ L N++LQ G
Sbjct: 344 FHDIAIENVHATGSGSAGTIVGLPESPVEGLSLKNVDLQAKTG 386
>gi|336251837|ref|YP_004585805.1| Polygalacturonase [Halopiger xanaduensis SH-6]
gi|335339761|gb|AEH38999.1| Polygalacturonase [Halopiger xanaduensis SH-6]
Length = 516
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 123/408 (30%), Positives = 184/408 (45%), Gaps = 43/408 (10%)
Query: 37 DKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTL 96
D+ I ++G + D T A + A+ +GGT+ YVP G + TG + TL
Sbjct: 7 DRFDIREYGAISDSDDPATDAIQTAL---DECAETGGTV-YVPAGRFRTGPLRIGDRTTL 62
Query: 97 YLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDG 156
+L GA + D +P + S G + G + + ++V I+G GTIDG
Sbjct: 63 HLDPGATLTFVGDYDAFPTVE---SRWEGWNQYG--FHPCLWVTDAENVEISG-RGTIDG 116
Query: 157 QGAIWWNMW-----------RQRTLPFT--------------RPNLIEFMNSRSIIISNV 191
G WW + R+R F RP L + S ++ +S V
Sbjct: 117 NGQYWWQFYGADDDELPEGLRERLAEFNGKNDKADDVSSFTLRPPLFQISESENVTVSGV 176
Query: 192 IFQNSPFWNIHPVYCSNVVIRYVTILAPAD-SPNTDGIDPDSSSNVCIEDSYISTGDDLV 250
QNSPFWN H VY NV I V +L PA+ +PN DGID DSS V I D+YI+ GDD +
Sbjct: 177 TLQNSPFWNTHVVYSENVTISDVNVLNPAEGAPNGDGIDIDSSRYVRISDAYINAGDDAI 236
Query: 251 AVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVG 310
+KSG + G G P+S IT+ T + G+ +GSE SG V +V + + G
Sbjct: 237 CIKSGKNAEGREVGEPASQITVTNCTVEAGHGGVVIGSEMSGDVRDVAVTNCTFTDTDRG 296
Query: 311 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNP--NALPVVNGITIK 368
+ +KT RGG + ++ ++ M I G D + P P+V +T
Sbjct: 297 VRIKTQRDRGGVVEDLRFDNIVMRRIASPFTINGYYFTPLDSEPEPVDEGTPMVRNVTFS 356
Query: 369 DVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVS 416
++ V+ +G GL F GI N+ + + PL +D+
Sbjct: 357 NITARNVETAGFFAGLPEQYFEGIEFDNVRIDA-----TRPLDATDLD 399
>gi|329964701|ref|ZP_08301755.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328525101|gb|EGF52153.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 506
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 135/443 (30%), Positives = 195/443 (44%), Gaps = 76/443 (17%)
Query: 29 IVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSF 88
+V + + +++ DFG VG+GK L T+AF AI L GG L VP GV+ TG
Sbjct: 40 VVAPEFPDRTVNLKDFGAVGNGKDLCTEAFASAI---NTLSGQGGGHLIVPAGVWFTGPI 96
Query: 89 NLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVIT 148
L S++ L+L KGAVI + D +PL+ + R R S I G L++V IT
Sbjct: 97 VLKSNIDLHLEKGAVILFSPDVDLYPLVETVFEGLDTR-----RCQSPISGRNLENVAIT 151
Query: 149 GENGTIDGQGAIW---------WNMWRQ------------------RTLP---------- 171
GE G IDG G W ++W+Q TL
Sbjct: 152 GE-GAIDGNGHFWRPLKREKVTESVWKQTVSRGGVYKRPTYWFPYPETLKGDTISNMNVP 210
Query: 172 --------------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL 217
F RP ++ + R++ + VIFQNSP WN+HP+ C NV++ V +
Sbjct: 211 RHLITEEEWQSVRHFLRPVMVSLIECRNVWLQGVIFQNSPAWNLHPLMCENVLVEEVQVR 270
Query: 218 APADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTG 277
P+ + N DG+D +S N I +S GDD + +KSG DE G + + T
Sbjct: 271 NPSYAQNGDGLDLESCRNALIVNSTFDVGDDGICLKSGKDEDGRRRARVCENVVVDGCTV 330
Query: 278 SSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYME--- 334
G VGSE SGGV NV + VG+ K+ GRGG + NI V++V M
Sbjct: 331 FKGHGGFVVGSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGIVENIWVTNVSMMDIP 390
Query: 335 ------NARKGIKIAGDV---GDHPDDKFNP----NALPVVNGITIKDVWGTKVQQSGLI 381
N G K A +V G+ K P P I ++++ +++
Sbjct: 391 TEPITFNLYYGGKSAVEVLESGETVPAKVEPLPVDETTPCFRNIHVRNLVCAGARRALFF 450
Query: 382 QGLKNSPFTGICLSNINLQGVAG 404
G+ P GI L +I++ G
Sbjct: 451 NGIPEMPIDGIVLEDIDITSRLG 473
>gi|393786391|ref|ZP_10374527.1| hypothetical protein HMPREF1068_00807 [Bacteroides nordii
CL02T12C05]
gi|392660020|gb|EIY53637.1| hypothetical protein HMPREF1068_00807 [Bacteroides nordii
CL02T12C05]
Length = 509
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 136/477 (28%), Positives = 203/477 (42%), Gaps = 89/477 (18%)
Query: 4 FLVTLSILLSYFNCFSLASV-----VTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAF 58
FL ++L S+ + + T + ++ + K+ + DFG VG+G L T AF
Sbjct: 9 FLCAWTVLPSWAQTYKYEEIYQKLPFTMPKVEAPQFPSLKVFLPDFGAVGNGVELCTDAF 68
Query: 59 REAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAP 118
+AI + L GG L VP G++LTG L S++ L++ KGAVI + D +PL+
Sbjct: 69 AKAI---ETLSARGGGYLIVPAGIWLTGPIVLKSNINLHIEKGAVILFSPDVELYPLVET 125
Query: 119 LPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIW---------WNMWRQ-- 167
+ R R S I G L +V ITG+ G IDG G W ++W+Q
Sbjct: 126 VFEGLDTR-----RCQSPISGRNLTNVAITGQ-GAIDGNGHYWRPLKREKVTESVWKQTI 179
Query: 168 ----------------RTLP------------------------FTRPNLIEFMNSRSII 187
+TL F RP ++ + +++
Sbjct: 180 ARGGVYKRPTYWFPYPQTLKGDTISNMNVPQNLKTEEEWQSVRHFLRPVMVSLIECKNVW 239
Query: 188 ISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGD 247
VIFQNSP WN+HP+ C NV+I + + P+ + N DG+D +S N I +S GD
Sbjct: 240 FQGVIFQNSPAWNLHPLMCENVLIEDIQVRNPSYAQNGDGLDLESCKNALIVNSTFDVGD 299
Query: 248 DLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNV 307
D + +KSG DE G P + + T G VGSE SGGV NV +
Sbjct: 300 DGICLKSGKDEDGRRRARPCENVVVDGCTVFKGHGGFVVGSEMSGGVRNVSVSNCQFLGT 359
Query: 308 GVGIHVKTNIGRGGFIRNITVSDVYM--------------------ENARKGIKIAGDVG 347
VG+ K+ GRGG + NI + +V M E G KI V
Sbjct: 360 DVGLRFKSKRGRGGVVENIWIRNVSMMDIPTEPVTFNLYYGGKSAVEVLESGEKIPAKVD 419
Query: 348 DHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 404
P D + P I I ++ + +++ G+ P GI L N+++ G
Sbjct: 420 PLPVD----DTTPCFRNIHISNLVCSNARRALFFNGIPEMPIDGITLDNLDITSQIG 472
>gi|383155065|gb|AFG59697.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155069|gb|AFG59699.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155073|gb|AFG59701.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155075|gb|AFG59702.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155077|gb|AFG59703.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155079|gb|AFG59704.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155081|gb|AFG59705.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155093|gb|AFG59711.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155095|gb|AFG59712.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155097|gb|AFG59713.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
Length = 138
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/138 (57%), Positives = 109/138 (78%)
Query: 239 EDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVL 298
ED Y+S GDD +A+KSGWDEYGI++ PSS I +RR+T S+PFSGIA+GSETSGG+ ++L
Sbjct: 1 EDCYVSNGDDGIAIKSGWDEYGISFNRPSSNIIVRRITISTPFSGIAIGSETSGGIRDIL 60
Query: 299 AEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNA 358
E+I++Y+ VGI VKTN+GRGG IRNIT S +Y++N GIK +G+ GDHPD ++NP A
Sbjct: 61 VENISIYSSTVGIRVKTNVGRGGIIRNITFSHIYLDNVGTGIKFSGNTGDHPDARYNPMA 120
Query: 359 LPVVNGITIKDVWGTKVQ 376
LPVV I + +V G+ ++
Sbjct: 121 LPVVGDIAVLNVVGSSIK 138
>gi|338730196|ref|YP_004659588.1| glycoside hydrolase family 28 [Thermotoga thermarum DSM 5069]
gi|335364547|gb|AEH50492.1| glycoside hydrolase family 28 [Thermotoga thermarum DSM 5069]
Length = 515
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 185/382 (48%), Gaps = 27/382 (7%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+ + DFG GDGKTL+T A + AI GGT+++ PPG YL L S++T+ +
Sbjct: 82 VDVRDFGAKGDGKTLDTFAVQAAIMSCPE----GGTVVF-PPGTYLLTPVFLKSNLTIEI 136
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGR-------ERPGGRYMSFIHGDGLQDVVITGEN 151
K AV+ + +P++ L S G P + S + G G+++V I G+
Sbjct: 137 QKDAVLLGVSERTLYPILPGLLSSKLGEIYLSSWEGEPAESFASLVTGIGVENVRIIGQ- 195
Query: 152 GTIDGQGAI--WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNV 209
G ID WW + + + + RP I ++I+I + +NSP W +HP++C ++
Sbjct: 196 GVIDANANFDDWWFNPKVKRIAW-RPRSIFLNRCKNILIEGITIRNSPSWTVHPLFCKDL 254
Query: 210 VIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSG 269
+ + I+ P +SPNTDGI+P+S SNV I IS GDD VAVK+G E + PS
Sbjct: 255 KLLTLNIVNPKNSPNTDGINPESCSNVLIAGCRISVGDDCVAVKAGKYEVKQKFDVPSEN 314
Query: 270 ITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVS 329
I IR + +GSE S GV NV + N G+ +KT RGG++ I +
Sbjct: 315 IEIRNCLMEHGHGAVVIGSEMSCGVRNVKVSNCLFVNTDRGLRIKTRRERGGYVDEIELK 374
Query: 330 DVYMENARKGIKIAG--DVGDHPDDKFNPNAL--------PVVNGITIKDVWGTKVQ-QS 378
+V M + I + G D ++ + + P + I +K+V V+ +
Sbjct: 375 NVQMNGVFVPLAINCFYNCGADYDPLYSSDKVVADVNERTPTIGSIVMKNVLCEDVKSMA 434
Query: 379 GLIQGLKNSPFTGICLSNINLQ 400
+ GL I + N+ ++
Sbjct: 435 AFVYGLPEKKIEKIYMENVRIE 456
>gi|375150362|ref|YP_005012803.1| Exo-poly-alpha-galacturonosidase [Niastella koreensis GR20-10]
gi|361064408|gb|AEW03400.1| Exo-poly-alpha-galacturonosidase [Niastella koreensis GR20-10]
Length = 532
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/346 (30%), Positives = 168/346 (48%), Gaps = 53/346 (15%)
Query: 34 YRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSH 93
++ D +SIT FG DG TLNT+A + I + + GG ++ +P G++LTG L S+
Sbjct: 35 FKKDTLSITQFGAKSDGLTLNTEAINKTI---EACSKQGGGVVLIPQGIWLTGPIVLKSN 91
Query: 94 MTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGT 153
+ LY+++ A+I+ T D +PLI +Y G++ R + I G L++V ITG+ G
Sbjct: 92 VNLYVSRAALIQFTADKTQYPLI---ETYFEGKKAV--RNQAPISGTDLENVAITGD-GV 145
Query: 154 IDGQGAIWWNM---------WRQRTLP--------------------------------- 171
IDG G IW + W++ T
Sbjct: 146 IDGNGDIWRMVKKDKVTEGEWKKLTASGGVVTADGRSWYPSEAYMKAETEKGPKTDYAAI 205
Query: 172 --FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 229
+ RPN++ N R +++ N FQNSP WN+H +YC + + V + + N DG+D
Sbjct: 206 KDYLRPNMVVLRNCRKVLLQNTTFQNSPCWNLHMLYCEQLTLDGVRVRNLPSAQNGDGMD 265
Query: 230 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 289
+S S V +++S + GDD + +KSG DE G G S I I G +GSE
Sbjct: 266 IESCSYVEVKNSTLDCGDDGICIKSGKDEEGRKAGKASQYIYIHDNVVYKAHGGFVIGSE 325
Query: 290 TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 335
SGG ++ + + VG+ KT GRGG + NI + ++ M +
Sbjct: 326 MSGGAHDIFVTNCSFIGTDVGLRFKTQRGRGGVVENIYIKNISMRD 371
>gi|293571108|ref|ZP_06682148.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E980]
gi|431739345|ref|ZP_19528280.1| polygalacturonase [Enterococcus faecium E1972]
gi|291608838|gb|EFF38120.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E980]
gi|430596073|gb|ELB33930.1| polygalacturonase [Enterococcus faecium E1972]
Length = 445
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/268 (36%), Positives = 150/268 (55%), Gaps = 12/268 (4%)
Query: 71 SGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPG 130
+GG + VP G +LTG+ L S++ L+L+ GAV+K + D ++P++ S G R
Sbjct: 29 AGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPIVH---SRWEGVHRK- 84
Query: 131 GRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQR--TLPFTRPNLIEFMNSRSIII 188
Y S I+ ++++ +TG GT+DG G WW+ +R L + RP L+ F N I +
Sbjct: 85 -VYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITV 142
Query: 189 SNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDD 248
++ SP W I+P+ CSN +TIL PADSPNTDGIDP+S NV I + +I GDD
Sbjct: 143 KDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDD 202
Query: 249 LVAVKSGWDEYGIAYGH-PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNV 307
+A+K+G ++ Y ITI T G+ +GSE SG + N+ +
Sbjct: 203 CIAIKAGTED---TYERIACENITITNCTMVHGHGGVVLGSEMSGSIRNITISNCIFQET 259
Query: 308 GVGIHVKTNIGRGGFIRNITVSDVYMEN 335
GI +K+ GRGG + +I VS++ M+N
Sbjct: 260 DRGIRLKSRRGRGGNVEDIRVSNIVMDN 287
>gi|294617477|ref|ZP_06697109.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1679]
gi|291596284|gb|EFF27545.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1679]
Length = 363
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/267 (37%), Positives = 149/267 (55%), Gaps = 12/267 (4%)
Query: 72 GGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGG 131
GG + VP G +LTG+ L S++ L+L+ GAV+K + D ++P++ S G R
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVVH---SRWEGVHRK-- 84
Query: 132 RYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQR--TLPFTRPNLIEFMNSRSIIIS 189
Y S I+ ++++ +TG GT+DG G WW+ +R L + RP L+ F N I +
Sbjct: 85 VYASCIYAQNVENISVTGF-GTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 190 NVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDL 249
++ SP W I+P+ CSN +TIL PADSPNTDGIDP+S NV I + +I GDD
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 250 VAVKSGWDEYGIAYGH-PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVG 308
+A+K+G ++ Y ITI T G+ +GSE SG + N+ +
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTMVHGHGGVVLGSEMSGSIRNITISNCIFQETD 260
Query: 309 VGIHVKTNIGRGGFIRNITVSDVYMEN 335
GI +K+ GRGG + +I VS++ M+N
Sbjct: 261 RGIRLKSRRGRGGIVEDIRVSNIVMDN 287
>gi|430842911|ref|ZP_19460818.1| polygalacturonase [Enterococcus faecium E1007]
gi|431064168|ref|ZP_19493515.1| polygalacturonase [Enterococcus faecium E1604]
gi|431131393|ref|ZP_19498944.1| polygalacturonase [Enterococcus faecium E1613]
gi|431602171|ref|ZP_19522547.1| polygalacturonase [Enterococcus faecium E1861]
gi|431742395|ref|ZP_19531288.1| polygalacturonase [Enterococcus faecium E2039]
gi|430492622|gb|ELA68986.1| polygalacturonase [Enterococcus faecium E1007]
gi|430565953|gb|ELB05076.1| polygalacturonase [Enterococcus faecium E1613]
gi|430568809|gb|ELB07839.1| polygalacturonase [Enterococcus faecium E1604]
gi|430589939|gb|ELB28031.1| polygalacturonase [Enterococcus faecium E1861]
gi|430600153|gb|ELB37811.1| polygalacturonase [Enterococcus faecium E2039]
Length = 445
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/268 (36%), Positives = 150/268 (55%), Gaps = 12/268 (4%)
Query: 71 SGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPG 130
+GG + VP G +LTG+ L S++ L+L+ GAV+K + D ++P++ S G R
Sbjct: 29 AGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPIVH---SRWEGVHRK- 84
Query: 131 GRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQR--TLPFTRPNLIEFMNSRSIII 188
Y S I+ ++++ +TG GT+DG G WW+ +R L + RP L+ F N I +
Sbjct: 85 -VYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITV 142
Query: 189 SNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDD 248
++ SP W I+P+ CSN +TIL PADSPNTDGIDP+S NV I + +I GDD
Sbjct: 143 KDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDD 202
Query: 249 LVAVKSGWDEYGIAYGH-PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNV 307
+A+K+G ++ Y ITI T G+ +GSE SG + N+ +
Sbjct: 203 CIAIKAGTED---TYERIACENITITNCTMVHGHGGVVLGSEMSGSIRNITISNCIFQET 259
Query: 308 GVGIHVKTNIGRGGFIRNITVSDVYMEN 335
GI +K+ GRGG + +I VS++ M+N
Sbjct: 260 DRGIRLKSRRGRGGNVEDIRVSNIVMDN 287
>gi|430827435|ref|ZP_19445578.1| polygalacturonase [Enterococcus faecium E0164]
gi|430444043|gb|ELA53955.1| polygalacturonase [Enterococcus faecium E0164]
Length = 445
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/267 (37%), Positives = 149/267 (55%), Gaps = 12/267 (4%)
Query: 72 GGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGG 131
GG + VP G +LTG+ L S++ L+L+ GAV+K + D ++P++ S G R
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVVH---SRWEGVHRK-- 84
Query: 132 RYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQR--TLPFTRPNLIEFMNSRSIIIS 189
Y S I+ ++++ +TG GT+DG G WW+ +R L + RP L+ F N I +
Sbjct: 85 VYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 190 NVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDL 249
++ SP W I+P+ CSN +TIL PADSPNTDGIDP+S NV I + +I GDD
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNYHIDVGDDC 203
Query: 250 VAVKSGWDEYGIAYGH-PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVG 308
+A+K+G ++ Y ITI T G+ +GSE SG + N+ +
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTMVHGHGGVVLGSEMSGSIRNITISNCIFQETD 260
Query: 309 VGIHVKTNIGRGGFIRNITVSDVYMEN 335
GI +K+ GRGG + +I VS++ M+N
Sbjct: 261 RGIRLKSRRGRGGIVEDIRVSNIVMDN 287
>gi|374983540|ref|YP_004959035.1| glycoside hydrolase family protein [Streptomyces bingchenggensis
BCW-1]
gi|297154192|gb|ADI03904.1| glycoside hydrolase family 28 [Streptomyces bingchenggensis BCW-1]
Length = 475
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 132/428 (30%), Positives = 203/428 (47%), Gaps = 75/428 (17%)
Query: 29 IVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSF 88
I P + +ITD+G VGDG+T+NT+AFR AI R+GG + VP G +LTG+
Sbjct: 52 IRPPAFPRRTFTITDYGAVGDGQTMNTEAFRAAI---ADCHRAGGGHVLVPEGRFLTGAI 108
Query: 89 NLTSHMTLYLAKGAVIKATQDTWNW-PLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVI 147
+L S + L++ +GA I + D ++ P++ + R Y FI+ G ++V +
Sbjct: 109 HLRSGVDLHVTEGATIAFSPDPRDFLPVV-----FTRWEGTECYNYSPFIYAYGERNVAV 163
Query: 148 TGENGTIDGQGAIW-WNMWRQRTLP---------------------------FTRPNLIE 179
TG GT+DGQ + W W + + P + RP +++
Sbjct: 164 TGP-GTLDGQARLGPWESWYRTSGPQGPDQSLLRRMGSAGVPVAERVFGDGHYLRPKMVQ 222
Query: 180 FMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP--NTDGIDPDSSSNVC 237
F R++++S + + P W +HPV +NV +R +T+ DS NTDG DP+ S+V
Sbjct: 223 FYRCRNVLVSGLTIVDPPMWTVHPVLSTNVTVRDITV----DSTLYNTDGCDPECCSDVL 278
Query: 238 IEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENV 297
I +T DD VAVKSG DE G G PS I +R S + G+ VGSE SGGV ++
Sbjct: 279 ITGCRFNTNDDCVAVKSGRDEDGHRVGVPSRNIVVRDCRFSGRWGGMTVGSEMSGGVRDI 338
Query: 298 LAEHINL--------YNVGVGIHVKTNIGRGG-----FIRNITVSDVYMENARKGIKIAG 344
AE+ + Y V ++VK + RGG IRN T +V E + G
Sbjct: 339 FAENCEINSPDFPGRYPVKHALYVKASKKRGGCIDGVHIRNFTGQNVEREAVFVNMNYNG 398
Query: 345 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL-----IQGLKNSPFTGICLSNINL 399
G LPV +++++ +++ G + GL+ G+ LS
Sbjct: 399 GEG---------GTLPV----SVRNIHMDRMEIDGARAVLQLVGLETDHLRGVSLSRSTF 445
Query: 400 QGVAGPTS 407
G+ P S
Sbjct: 446 TGILNPDS 453
>gi|383752964|ref|YP_005431867.1| putative polygalacturonase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381365016|dbj|BAL81844.1| putative polygalacturonase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 494
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 125/381 (32%), Positives = 184/381 (48%), Gaps = 48/381 (12%)
Query: 65 IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGR 124
I + ++GG + +P G++ TG+ L SH+ L+L GA + ++ N + PL Y R
Sbjct: 89 IDDMAQAGGGRVEIPAGIWYTGALELKSHVELHLVAGARLCFIRNKSN--VFYPL-RYTR 145
Query: 125 GRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIW-WNMWR-----------QRTLPF 172
+ FI+ +G +D+ ITG+ GT+DGQ + W W+ QR F
Sbjct: 146 WEGVECMNFSPFIYAEGAEDISITGQ-GTLDGQADEFNWMPWKFGYFGEPDQEEQRQRLF 204
Query: 173 T--------------------RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIR 212
RP I+F NS+ I I V NSPFW I+PV C NV I+
Sbjct: 205 RAGAEGIPVQQRIFADDVSTLRPPFIQFYNSKDIRIMGVHIVNSPFWEINPVLCENVWIK 264
Query: 213 YVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITI 272
V I D N DGIDP+SS NV IED Y TGDD +A+KSG +E G G P++ + I
Sbjct: 265 GVHI--ETDLYNNDGIDPESSRNVLIEDCYFLTGDDCIAIKSGRNEDGRRIGVPTANVII 322
Query: 273 RRVTGSSPFSGIAVGSETSGGVENVLA--EHINLYNVGVGIHVKTNIGRGGFIRNITVSD 330
R ++ GI +GSE SGGV +V A H + N+ I KTN RGG + N+ V D
Sbjct: 323 RHNRFANGHGGITLGSEISGGVHDVFATGNHFDSPNLDYPIRFKTNAMRGGTLENVYVKD 382
Query: 331 VYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTK-----VQQSGLIQGLK 385
+ AR + A + N LP ++ IT+ W + + + ++G
Sbjct: 383 SVVNKARLAVVHADFFYEEGHAGEN---LPQLDNITLDGFWTAEGGSIDAKYAFYLKGFA 439
Query: 386 NSPFTGICLSNINLQGVAGPT 406
++ + ++ L+GV G
Sbjct: 440 DALIENVTFRDMKLEGVKGEA 460
>gi|218187051|gb|EEC69478.1| hypothetical protein OsI_38684 [Oryza sativa Indica Group]
Length = 365
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 131/207 (63%), Gaps = 1/207 (0%)
Query: 225 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF-SG 283
TD + DS SN+CIEDS IS D +++KSGWD YGI G P+S I I RV + +
Sbjct: 137 TDVVITDSCSNMCIEDSSISVAHDAISLKSGWDNYGITIGRPASDIHISRVDLQASLGAA 196
Query: 284 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 343
+A GSE SGG+ ++ +H+N++ GI KT GRGG+IR++ +SDV ME+ IK
Sbjct: 197 LAFGSEMSGGISDIHVDHLNIHGSSRGILFKTAPGRGGYIRDVVISDVQMEDVNVAIKFT 256
Query: 344 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 403
GD HPD+ F+P+ALP++N IT+K++ GT + +G++ G+ PFT ICLSNI+
Sbjct: 257 GDWSTHPDNHFDPSALPMINRITLKNMVGTNISVAGVLSGINGDPFTNICLSNISFSLAD 316
Query: 404 GPTSPPLKCSDVSGSAYQVKPWPCSEL 430
S CS++SG + V P PC +L
Sbjct: 317 STQSSSWSCSNISGYSELVFPEPCPDL 343
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 78/111 (70%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
++I++FG VGDG T+NT F+ AI+ ++ GG LYVP G +LTGSFNLTSH+T++
Sbjct: 32 SVTISEFGAVGDGVTVNTLPFQNAIFYLRSFADKGGAQLYVPRGRWLTGSFNLTSHLTIF 91
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVIT 148
L K AVI ++ WP++ PLPSYG+G + PG R+ S I+G + DVVIT
Sbjct: 92 LEKDAVIIGAKEVSEWPIVEPLPSYGQGIDLPGARHRSLINGHNVTDVVIT 142
>gi|261207232|ref|ZP_05921921.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium TC 6]
gi|289567172|ref|ZP_06447562.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium D344SRF]
gi|294614352|ref|ZP_06694269.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1636]
gi|430850281|ref|ZP_19468044.1| polygalacturonase [Enterococcus faecium E1185]
gi|260078860|gb|EEW66562.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium TC 6]
gi|289161031|gb|EFD08941.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium D344SRF]
gi|291592824|gb|EFF24416.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1636]
gi|430535906|gb|ELA76297.1| polygalacturonase [Enterococcus faecium E1185]
Length = 445
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 114/342 (33%), Positives = 170/342 (49%), Gaps = 23/342 (6%)
Query: 72 GGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGG 131
GG + VP G +LTG+ L S++ L+L+ GAV+K + D ++P++ S G R
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVVH---SRWEGVHRK-- 84
Query: 132 RYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQR--TLPFTRPNLIEFMNSRSIIIS 189
Y I+ ++++ +TG GT+DG G WW+ +R L + RP L+ F N I +
Sbjct: 85 VYAFCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 190 NVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDL 249
++ SP W I+P+ CSN +TIL PADSPNTDGIDP+S NV I + +I GDD
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 250 VAVKSGWDEYGIAYGH-PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVG 308
+A+K+G ++ Y ITI T G+ +GSE SG + N+ +
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTMVHGHGGVVLGSEMSGSIRNITISNCIFQETD 260
Query: 309 VGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-----AGDVGDHP---DDKFNP--NA 358
GI +K+ GRGG + +I VS++ M+N + G G P + K P
Sbjct: 261 RGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYVWEKKAYPIDER 320
Query: 359 LPVVNGITIKDVWGTKVQQS-GLIQGLKNSPFTGICLSNINL 399
P I ++ V S G I GL I NI++
Sbjct: 321 TPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDV 362
>gi|430860956|ref|ZP_19478551.1| polygalacturonase [Enterococcus faecium E1573]
gi|430551274|gb|ELA91043.1| polygalacturonase [Enterococcus faecium E1573]
Length = 445
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 114/342 (33%), Positives = 170/342 (49%), Gaps = 23/342 (6%)
Query: 72 GGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGG 131
GG + VP G +LTG+ L S++ L+L+ GAV+K + D ++P++ S G R
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVVH---SRWEGVHRK-- 84
Query: 132 RYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQR--TLPFTRPNLIEFMNSRSIIIS 189
Y S I+ ++++ +TG GT+DG WW+ +R L + RP L+ F N I +
Sbjct: 85 VYASCIYAQNVENISVTG-FGTLDGNEKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 190 NVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDL 249
++ SP W I+P+ CSN +TIL PADSPNTDGIDP+S NV I + +I GDD
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 250 VAVKSGWDEYGIAYGH-PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVG 308
+A+K+G ++ Y ITI T G+ +GSE SG + N+ +
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTMVHGHGGVVLGSEMSGSIRNITISNCIFQETD 260
Query: 309 VGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-----AGDVGDHP---DDKFNP--NA 358
GI +K+ GRGG + +I VS++ M+N + G G P + K P
Sbjct: 261 RGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYVWEKKAYPIDER 320
Query: 359 LPVVNGITIKDVWGTKVQQS-GLIQGLKNSPFTGICLSNINL 399
P I ++ V S G I GL I NI++
Sbjct: 321 TPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDV 362
>gi|292494258|ref|YP_003533401.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
gi|448289466|ref|ZP_21480637.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
gi|291369174|gb|ADE01404.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
gi|445582547|gb|ELY36888.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
Length = 549
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 124/432 (28%), Positives = 194/432 (44%), Gaps = 56/432 (12%)
Query: 13 SYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSG 72
++ N + AS VT + RN + D+G + D +L+T A + A+ G
Sbjct: 27 TFMNALADASGVT------LEQRN----VRDYG-IEDDDSLDTAAIQAAL---DDCAGEG 72
Query: 73 GTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGR 132
G + Y+PPG Y + + T LA GA ++ QD +P + S G ++ G
Sbjct: 73 GEV-YLPPGTYRSAPLRVGDDTTFRLANGAELRFVQDFTEFPTVE---SRWEGWDQDG-- 126
Query: 133 YMSFIHGDGLQDVVITGENGTIDGQGAIWW------------------------NMWRQR 168
+ +H +V ITGE G IDG G+ WW N +
Sbjct: 127 FHPCLHVADASNVTITGE-GVIDGGGSYWWVFVSLPPEQYPSELAARLEEIRSGNQQDEV 185
Query: 169 TLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGI 228
+ RP L++ ++ +S V +NSPFWN H VY +V I V+I P D+PN DGI
Sbjct: 186 STFTVRPPLLQIDGCENVTVSGVTLRNSPFWNTHVVYSDDVTIHDVSIQNPPDAPNGDGI 245
Query: 229 DPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 288
D DSS V + D++I GDD + +KSG DE G G P+ + + T G+ +GS
Sbjct: 246 DIDSSRFVRVSDTHIDAGDDAICLKSGKDEQGREVGRPTENVVVTNCTVEHGHGGVVIGS 305
Query: 289 ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG---- 344
ET+G V +V + + GI +K+ GRGG + ++ + M I G
Sbjct: 306 ETAGDVRHVTVTNCTFTDTDRGIRIKSKRGRGGTVEDLRFDTIIMRRVACPFVINGYYQT 365
Query: 345 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 404
D+ P K A P V + + +V+ + + GL F GI +++++
Sbjct: 366 DIDSDP--KPVTEATPNVRNVDFHHITAEEVESAAFLAGLPEQRFEGISFTDVDIDA--- 420
Query: 405 PTSPPLKCSDVS 416
+ P SD+S
Sbjct: 421 --TRPFDASDLS 430
>gi|390453172|ref|ZP_10238700.1| polygalacturonase [Paenibacillus peoriae KCTC 3763]
Length = 453
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 121/373 (32%), Positives = 191/373 (51%), Gaps = 24/373 (6%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
+I D+G DG T T+A AI + +GG + +P G Y TG+ L S++ L+++
Sbjct: 5 NIVDYGAPQDGTTPATEAIANAIEAASN---AGGGTVVIPSGTYFTGAIFLKSNIELHVS 61
Query: 100 KGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGA 159
GA++ + + ++P++ S G +R + S I+G L+++ +TG +G ++G G
Sbjct: 62 PGAILSFSTNPADYPVVE---SRWEGVQRE--VHASCIYGQNLENISVTG-SGILEGNGQ 115
Query: 160 IWWNMWRQ--RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL 217
WW R L + RP LI F + + I +V+ +NSP W ++P+ C NV I ++IL
Sbjct: 116 PWWEKHRNHPEDLQYPRPKLISFDRCQRVTIKDVMLKNSPSWTVNPIACYNVTIDNLSIL 175
Query: 218 APADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTG 277
PADSPNTDGI+P+S SNV I + I GDD +A+K+G ++ ITI T
Sbjct: 176 NPADSPNTDGINPESCSNVRISNCNIDVGDDCIAIKAGTEDTQERIA--CENITITNCTM 233
Query: 278 SSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 337
G+ +GSE SG + NV + GI +K+ GRGG I +I VS++ ME
Sbjct: 234 VHGHGGVVLGSEMSGDIRNVTISNCVFKQTDRGIRLKSRRGRGGIIEDIRVSNIVMEEVI 293
Query: 338 KG--IKIAGDVGDHPDDKF--NPNALPVVNG------ITIKDVWGTKVQ-QSGLIQGLKN 386
+ + G DK+ + N PV + I D+ +V +G + GL
Sbjct: 294 CPFILNLYYFCGPRGKDKYVWDKNPYPVTDETPSFRRIHFSDITARQVHAAAGFLYGLAE 353
Query: 387 SPFTGICLSNINL 399
I SNI++
Sbjct: 354 QYIAEITFSNIDI 366
>gi|448567657|ref|ZP_21637582.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax prahovense
DSM 18310]
gi|445711655|gb|ELZ63445.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax prahovense
DSM 18310]
Length = 549
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 125/432 (28%), Positives = 194/432 (44%), Gaps = 56/432 (12%)
Query: 13 SYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSG 72
++ N + AS VT + RN + D+G + D +L+T A + A+ G
Sbjct: 27 TFMNALADASGVT------LEQRN----VRDYG-IEDDDSLDTAAIQAAL---DDCAGEG 72
Query: 73 GTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGR 132
G + Y+PPG Y + + T LA GA ++ QD +P + S G ++ G
Sbjct: 73 GEV-YLPPGTYRSAPLRVGDDTTFRLANGAELRFVQDFTEFPTVE---SRWEGWDQDG-- 126
Query: 133 YMSFIHGDGLQDVVITGENGTIDGQGAIWWNM-----------------------WRQRT 169
+ +H +V ITGE G IDG G+ WW +
Sbjct: 127 FHPCLHVADASNVTITGE-GIIDGGGSYWWEFVSLPPEQYPSELAARLEEIRSGNQQDEV 185
Query: 170 LPFT-RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGI 228
FT RP L++ ++ +S V +NSPFWN H VY +V I V+I P D+PN DGI
Sbjct: 186 STFTVRPPLLQIDGCENVTVSGVTLRNSPFWNTHVVYSDDVTIHDVSIQNPPDAPNGDGI 245
Query: 229 DPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 288
D DSS V + D++I GDD + +KSG DE G G P+ + + T G+ +GS
Sbjct: 246 DIDSSRFVRVSDTHIDAGDDAICLKSGKDEQGREVGRPTENVVVTNCTVEHGHGGVVIGS 305
Query: 289 ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG---- 344
ET+G V +V + + GI +K+ GRGG + ++ + M I G
Sbjct: 306 ETAGDVRHVTVTNCTFTDTDRGIRIKSKRGRGGTVEDLRFDTIIMRRVACPFVINGYYQT 365
Query: 345 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 404
D+ P K A P V + + +V+ + + GL F GI +++++
Sbjct: 366 DIDSDP--KPVTEATPNVRNVDFHHITAEEVESAAFLAGLPEQRFEGISFTDVDIDA--- 420
Query: 405 PTSPPLKCSDVS 416
+ P SD+S
Sbjct: 421 --TRPFDASDLS 430
>gi|383155085|gb|AFG59707.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
Length = 138
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 79/138 (57%), Positives = 108/138 (78%)
Query: 239 EDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVL 298
ED Y+S GDD +A+KSGWDEYGI++ PSS I +RR+T S+PFSGIA+GSE SGG+ ++L
Sbjct: 1 EDCYVSNGDDGIAIKSGWDEYGISFNRPSSNIIVRRITISTPFSGIAIGSEMSGGIRDIL 60
Query: 299 AEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNA 358
E+I++Y+ VGI VKTN+GRGG IRNIT S +Y++N GIK +G+ GDHPD ++NP A
Sbjct: 61 VENISIYSSTVGIRVKTNVGRGGIIRNITFSHIYLDNVGTGIKFSGNTGDHPDARYNPMA 120
Query: 359 LPVVNGITIKDVWGTKVQ 376
LPVV I + +V G+ ++
Sbjct: 121 LPVVGDIAVLNVVGSSIK 138
>gi|433424436|ref|ZP_20406465.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp.
BAB2207]
gi|432198085|gb|ELK54408.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp.
BAB2207]
Length = 519
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 115/397 (28%), Positives = 178/397 (44%), Gaps = 41/397 (10%)
Query: 46 GVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIK 105
G+ D +L+T A + A+ G +Y+PPG Y + + T LA GA ++
Sbjct: 12 GIDDDDSLDTAAIQAALDDCA----GEGGEVYLPPGTYRSAPLRVGDDTTFRLANGAELR 67
Query: 106 ATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNM- 164
QD +P + S G ++ G + +H ++V ITGE G IDG G+ WW
Sbjct: 68 FVQDFTEFPTVE---SRWEGWDQDG--FHPCLHVADAENVTITGE-GVIDGGGSYWWEFV 121
Query: 165 ----------------------WRQRTLPFT-RPNLIEFMNSRSIIISNVIFQNSPFWNI 201
+ FT RP L++ ++ +S V +NSPFWN
Sbjct: 122 SLPPEQYPSELTERLEEIRRGNQQDEVSTFTVRPPLLQIDGCENVTVSGVTLRNSPFWNT 181
Query: 202 HPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 261
H VY +V I V+I P D+PN DGID DSS V + D++I GDD + +KSG DE G
Sbjct: 182 HVVYSDDVTIHDVSIQNPPDAPNGDGIDIDSSRFVRVSDTHIDAGDDAICLKSGKDEQGR 241
Query: 262 AYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGG 321
G P+ + + T G+ +GSET+G V +V + + GI +K+ GRGG
Sbjct: 242 EVGRPTENVVVTNCTVEHGHGGVVIGSETAGDVRHVTVTNCTFTDTDRGIRIKSKRGRGG 301
Query: 322 FIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSG 379
+ ++ + M I G D P A P V + + +V+ +
Sbjct: 302 TVEDLRFDTIAMRRVACPFVINGYYQTDIDSDPEPVTEATPNVRNVDFHHITAEEVESAA 361
Query: 380 LIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVS 416
+ GL F GI +++++ + P SD+S
Sbjct: 362 FLAGLPEQRFEGISFTDVDIDA-----TRPFDASDLS 393
>gi|381180485|ref|ZP_09889325.1| glycoside hydrolase family 28 [Treponema saccharophilum DSM 2985]
gi|380767666|gb|EIC01665.1| glycoside hydrolase family 28 [Treponema saccharophilum DSM 2985]
Length = 453
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 161/331 (48%), Gaps = 42/331 (12%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
++ I DFGG GDGK N+ AF A I R+GG L VP GV+ +G + S TL
Sbjct: 3 EVKIDDFGGKGDGKFNNSNAFALAFAEIS---RNGGGKLTVPKGVWASGPIEIPSDTTLE 59
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
L +G+ I D + P + R + ++V ITG+ GT++G
Sbjct: 60 LEEGSEISFIPDPNLY-----TPVFTRWEGVECFAMHPLVLSSHTKNVRITGK-GTLNGN 113
Query: 158 GAIWWNMWRQ---------------------------------RTLPFTRPNLIEFMNSR 184
G WWN+ + R + F RP+L+E +
Sbjct: 114 GETWWNLKKAKKERGQSAPEDMYEKILAELNPGYENQPGGGGGREIQFLRPSLLEISFAE 173
Query: 185 SIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYIS 244
++ + + ++SPFW +HP+Y N+ +R + I P +PNTDGID DS NV IED ++S
Sbjct: 174 NVSVEGIEIKDSPFWTVHPLYVKNLTLRGIKIDNPYTAPNTDGIDVDSCENVVIEDCFVS 233
Query: 245 TGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINL 304
GDD + +KSG GI P+ + IR T + GI +GSET+ G+ ++ A +L
Sbjct: 234 VGDDGICIKSGSGPDGIRCAKPTVNVEIRNCTVRNAHGGIVIGSETAAGMSHIHAVGCDL 293
Query: 305 YNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 335
GI +K+ GRGG I +I + D+ M N
Sbjct: 294 SGTDRGIRIKSRRGRGGDIFDIELRDMVMNN 324
>gi|448581096|ref|ZP_21645086.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax gibbonsii
ATCC 33959]
gi|445733858|gb|ELZ85418.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax gibbonsii
ATCC 33959]
Length = 512
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 179/397 (45%), Gaps = 41/397 (10%)
Query: 46 GVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIK 105
G+ D +L+T A + A+ GG + Y+PPG Y + + T LA GA ++
Sbjct: 12 GIDDDDSLDTAAIQAAL---DDCAGEGGEV-YLPPGTYRSAPLRVGDDTTFRLANGAELR 67
Query: 106 ATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNM- 164
QD +P + S G ++ G + +H +V ITGE G IDG G+ WW
Sbjct: 68 FVQDFTEFPTVE---SRWEGWDQDG--FHPCLHVADASNVTITGE-GVIDGGGSYWWEFV 121
Query: 165 ----------------------WRQRTLPFT-RPNLIEFMNSRSIIISNVIFQNSPFWNI 201
+ FT RP L++ ++ +S V +NSPFWN
Sbjct: 122 SLPPEEYPAELAERLEEIRRGNQQDEVSTFTVRPPLLQIDGCENVTVSGVTLRNSPFWNT 181
Query: 202 HPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 261
H VY +V I V+I P D+PN DGID DSS V + D++I GDD + +KSG DE G
Sbjct: 182 HVVYSDDVTIHDVSIQNPPDAPNGDGIDIDSSRFVRVSDTHIDAGDDAICLKSGKDEQGR 241
Query: 262 AYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGG 321
G P+ + + T G+ +GSET+G V +V + + GI +K+ GRGG
Sbjct: 242 EVGRPTENVVVTNCTVEHGHGGVVIGSETAGDVRHVTVTNCTFTDTDRGIRIKSKRGRGG 301
Query: 322 FIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSG 379
+ ++ + M I G D + P A P V + + +V+ +
Sbjct: 302 TVEDLRFDTIVMRRVACPFVINGYYQTDIDSEPEPVTEATPNVRNVDFHHITAEEVESAA 361
Query: 380 LIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVS 416
+ GL F GI +++++ + P SD+S
Sbjct: 362 FLAGLPEQRFEGISFTDVDIDA-----TRPFDASDLS 393
>gi|284039631|ref|YP_003389561.1| glycoside hydrolase family protein [Spirosoma linguale DSM 74]
gi|283818924|gb|ADB40762.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
Length = 551
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 127/466 (27%), Positives = 201/466 (43%), Gaps = 75/466 (16%)
Query: 4 FLVTLSILLSYFNCFSLA----SVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFR 59
FL+ + LL+ F+ + S I +R D +I FG DG +LNT+A
Sbjct: 7 FLIVIGSLLTRFSATAQTTPTYSWTNLPKIAQPTFRRDTTNIIAFGAKPDGVSLNTQAIN 66
Query: 60 EAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPL 119
+AI + GG ++ VP G++LTG L S++ L+L K A + T D + L+
Sbjct: 67 KAI---STCSQKGGGVVLVPAGIWLTGPIVLKSNVNLHLKKAATLLFTTDKNQYALVE-- 121
Query: 120 PSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIW---------WNMWRQRTL 170
G + R S + G L +V ITG+ G +DG G +W + W+++
Sbjct: 122 ---GVYEGKRAARNQSPVSGTNLANVAITGQ-GILDGNGDVWRAVHKSQLTESQWKEKVE 177
Query: 171 P-------------------------------------------FTRPNLIEFMNSRSII 187
F RPNL+ N + ++
Sbjct: 178 SGGVLKDDGKTWYPSEQFKKASTENRSMLLAPGKTPQDFADMKDFLRPNLVVLTNCKKVL 237
Query: 188 ISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGD 247
+ V FQNSP W +HP+ C ++ +R VT P + N DG+D +S N IE + GD
Sbjct: 238 LEGVTFQNSPAWCLHPLMCQDLTLRNVTTKNPEYAHNGDGMDIESCKNFLIEGCTLDVGD 297
Query: 248 DLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNV 307
D + +KSG DE G G P+ IR T + G VGSE SGG + +
Sbjct: 298 DAICIKSGKDEEGRKRGMPTENGIIRNNTVYNGHGGFVVGSEMSGGARYLFVSNCTFMGT 357
Query: 308 GVGIHVKTNIGRGGFIRNITVSDVYMEN-ARKGI--------KIAGDVGDHPDDKFNPNA 358
G+ K+ GRGG + +I D++M+N A++ I K A D G+ +
Sbjct: 358 DKGLRFKSVRGRGGVVEHIYAKDIFMKNIAQEAIFFDMYYFVKFATD-GERDERPVVNEG 416
Query: 359 LPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 404
PV + +++ T ++ ++GL I ++N+ L+ G
Sbjct: 417 TPVFRNMRFENIVCTGAKKGIFVRGLPEMAIQTIAMANMVLETEKG 462
>gi|423214932|ref|ZP_17201460.1| hypothetical protein HMPREF1074_02992 [Bacteroides xylanisolvens
CL03T12C04]
gi|392692195|gb|EIY85433.1| hypothetical protein HMPREF1074_02992 [Bacteroides xylanisolvens
CL03T12C04]
Length = 472
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 122/401 (30%), Positives = 197/401 (49%), Gaps = 51/401 (12%)
Query: 31 PMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVY-LTGSFN 89
P+ + + +I DFG V DG+ AF +AI + GG + VP G Y + G
Sbjct: 49 PVTFPDKTYNIADFGAVADGRMPCKGAFDKAITQCSD---QGGGRIIVPAGTYYMNGPLV 105
Query: 90 LTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSY-GRGRERPGGRYMSFIHGDGLQDVVIT 148
S++ ++L GA++ + + ++ LP+ R Y I+ +Q++ +T
Sbjct: 106 FKSNVNIHLEDGAILNFSSNQEDY-----LPAVITRWEGTELFNYSPLIYAYHVQNIALT 160
Query: 149 GENGTIDGQGAIWWNMWR--------------QRTLPF----------TRPNLIEFMNSR 184
G+ GTI+G G+ ++ W + LP RP IE
Sbjct: 161 GK-GTINGNGSKKFSAWADNQNIDKEILRRMGRENLPIYRRIFGEGFRLRPGFIEPYGCV 219
Query: 185 SIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYIS 244
++ I + ++SPFW IHP++C+NV++R VT+ + + N DG DP+S SNV IE S
Sbjct: 220 NVRIEGITIKDSPFWVIHPIFCNNVIVRDVTV--DSHNRNNDGCDPESCSNVLIEGCTFS 277
Query: 245 TGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINL 304
TGDD +A+KSG D G P+ + IR T S +G+ +GSE SGGV NV E+I++
Sbjct: 278 TGDDAIAIKSGRDNDAWRIGQPTENVVIRNCTFWSKINGVCIGSEISGGVRNVFIENISI 337
Query: 305 YNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDK-----FNPNAL 359
I+ K+N+ RGG+I NI V ++ ++ R + V P+ K F+P
Sbjct: 338 LKSSNAIYFKSNLDRGGYIENIYVRNIQADSVRTAL-----VRVEPNYKGERSGFHPT-- 390
Query: 360 PVVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINL 399
+ N IT+++V + + + + G P I L NI +
Sbjct: 391 -LFNKITVENVTCGQTNECAISMAGFPELPIRNITLKNITV 430
>gi|281421112|ref|ZP_06252111.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
gi|281404647|gb|EFB35327.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
Length = 524
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 133/459 (28%), Positives = 203/459 (44%), Gaps = 81/459 (17%)
Query: 33 RYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTS 92
++ +++++ DFG +GDG +L T AF +AI L + GG L VP GV+ TG L S
Sbjct: 43 QFPANEVNLKDFGAIGDGSSLCTTAFAKAI---DALTQKGGGKLIVPQGVWFTGPIVLKS 99
Query: 93 HMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENG 152
++ L+L KGAVI + D +P I S+ R R S I G L +V ITG+ G
Sbjct: 100 NINLHLEKGAVILFSPDDALYPFIET--SFEGLDTR---RCQSPISGHHLTNVAITGQ-G 153
Query: 153 TIDGQGAIWWNMWRQRTLP----------------------------------------- 171
IDG G W + +Q+
Sbjct: 154 CIDGNGEYWRPLKKQKVTAAQWKQITSRGGAFKRADYWFPSEGALKADNSANMNVPKTPA 213
Query: 172 ----------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 221
F RP +I +N +++ ++ VIFQNSP WNIHP+ C NV+I V + P+
Sbjct: 214 SEEEWNEIKRFLRPVMISLVNCKNVWLNGVIFQNSPAWNIHPLMCENVLIEDVLVRNPSY 273
Query: 222 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 281
+ N DG+D +S N I +S GDD + +KSG D G G P + + T
Sbjct: 274 AQNGDGLDLESCKNALIVNSTFDVGDDGICIKSGKDADGRKRGIPCENVIVNGCTVFKGH 333
Query: 282 SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI- 340
G VGSE SGGV+N+ VG+ K+ GRGG + NI + ++ M + + +
Sbjct: 334 GGFVVGSEMSGGVKNIKVSDCQFLGTDVGLRFKSTRGRGGIVENIYIDNMSMFDIQTDVI 393
Query: 341 --------KIAGDVGDHPDD-------KFNPN-ALPVVNGITIKDVWGTKVQQSGLIQGL 384
K A +V + D+ KF + P I I V +++ GL
Sbjct: 394 TFDLYYGGKSAVEVLNDGDEAKSQKVQKFKVDETTPCFRNIDINHVICRTARRAAYFNGL 453
Query: 385 KNSPFTGICLSNINL----QGVAGPTSPPLKCSDVSGSA 419
P + I + ++ + QG+ + +K ++ SA
Sbjct: 454 PEMPVSNIHIKDMEVNNAQQGIVINRTDGVKLENIKVSA 492
>gi|225165583|ref|ZP_03727398.1| glycoside hydrolase family 28 [Diplosphaera colitermitum TAV2]
gi|224800169|gb|EEG18584.1| glycoside hydrolase family 28 [Diplosphaera colitermitum TAV2]
Length = 421
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 129/411 (31%), Positives = 194/411 (47%), Gaps = 52/411 (12%)
Query: 27 SGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTG 86
+ + P++ ++ + G G T AF AI L GG L VP G +LTG
Sbjct: 7 AALPPLQIPPAATNLLEHGAQEGGIQSCTTAFANAI---DTLAAQGGGTLTVPAGRWLTG 63
Query: 87 SFNLTSHMTLYLAKGAVIKATQDTWNW--PLIAPLPSYGRGRERPGGRYMSF---IHGDG 141
L SH+ L+L GA + +++ ++ P++A R G M+F ++
Sbjct: 64 PICLRSHIRLHLETGAHVVFSREHADYQPPVLA---------HRAGCWVMNFHPLLYARD 114
Query: 142 LQDVVITGENGTIDGQGAIWWNMWRQ-------------RTLPFT-----------RPNL 177
+ ITG GT DGQG WW W++ R +P RPN+
Sbjct: 115 ATHIAITGR-GTFDGQGDAWWE-WKKNEDGVRRLIDMVARRVPIAERIFGTVADCVRPNM 172
Query: 178 IEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVC 237
+EF+N R ++I NV ++SP + +HPV C NV +R ++IL + PN DGIDP+ NV
Sbjct: 173 LEFINCRDVLIENVTLRDSPAYLVHPVGCENVTLRGLSILG--NGPNNDGIDPEYCRNVL 230
Query: 238 IEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENV 297
IED + TGDD + +KSG D+ G A P+ + +RR+ GI +GSE S G+ NV
Sbjct: 231 IEDCLVDTGDDCICLKSGRDQDGWAENRPTENVIVRRIRTRRGHGGIVLGSELSSGIRNV 290
Query: 298 LAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-ARKGIKIAGDVGDHPDDKF-- 354
L E + GI +K+ GRGGF+ NI + ++ M + + I I D G +
Sbjct: 291 LVEDCDFSGTERGIRIKSAPGRGGFVENIHMRNIRMSDIIDEAIIIHMDYGSVAKGQVGS 350
Query: 355 ----NPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 401
N + + I I+DV ++ I G P I L N+ L
Sbjct: 351 AFQSNTPSPTRMRNILIEDVTCASAGKALDITGDAALPPESITLRNLRLHA 401
>gi|237710945|ref|ZP_04541426.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|229454789|gb|EEO60510.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
Length = 446
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 121/409 (29%), Positives = 190/409 (46%), Gaps = 59/409 (14%)
Query: 37 DKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTL 96
+++ + G G+ LNT I R L +GG L+ P G YLTGS ++ S++TL
Sbjct: 25 ERVDMQQAGADIQGRKLNTALINSTIDR---LNANGGGTLFFPAGTYLTGSIHMKSNITL 81
Query: 97 YLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDG 156
L GA +K +++ ++ + G + + I+ +++ I GE GT+DG
Sbjct: 82 ELEAGATLKFSENFDDFLPYVEVRHEGIMMKS----FQPLIYAVDAENITIKGE-GTLDG 136
Query: 157 QGAIWWNMW-----------------------RQRTLP-----------------FTRPN 176
QG WW + ++ L F RP
Sbjct: 137 QGKAWWTEFFRVLVDLRDNGKRNINKYQPMFEKENDLKALYAETNEDWHGTLDRRFFRPP 196
Query: 177 LIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNV 236
I + +++ + V NSPFW ++P +C NV I+ +TI SPNTDGI+P+S NV
Sbjct: 197 FIHPIRCKNVRVEGVTIINSPFWTVNPEFCDNVTIKGITI-HNVPSPNTDGINPESCKNV 255
Query: 237 CIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVEN 296
I D +IS GDD + +KSG D G P ITI T S G+ +GSE SGGV+
Sbjct: 256 HISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCTMLSGHGGVVIGSEMSGGVKK 315
Query: 297 VLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK-----GIKIAGDVGDHPD 351
V + GI +K+ GRGG + +I VS++ M N +K +K + +
Sbjct: 316 VTISNCVFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIVLNLKYSKMPAEPKS 375
Query: 352 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 400
D+ V+G+T++D V ++ GL +P TGI + ++ +Q
Sbjct: 376 DRTPEFRNIYVSGVTVRD-----VNTPIMVVGLPEAPITGIVMRDVYIQ 419
>gi|373955264|ref|ZP_09615224.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373891864|gb|EHQ27761.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 549
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 126/451 (27%), Positives = 202/451 (44%), Gaps = 81/451 (17%)
Query: 34 YRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSH 93
++ D +I F GDG TLNT + +AI GG ++ VP GV+LTG +L S+
Sbjct: 35 FKTDTFNIKQFDAKGDGLTLNTNSINDAITSCSE---KGGGVVLVPGGVWLTGPIDLKSN 91
Query: 94 MTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGT 153
+ L++ + ++ T+D +P++ G P GR S I G LQ++ ITG G
Sbjct: 92 VNLHIDRDGILLFTKDFNQYPIVE-----GSYEGLPAGRCKSPISGKDLQNIAITG-TGI 145
Query: 154 IDGQGAIW---------WNMWRQRTLP--------------------------------- 171
IDG G W W+ +
Sbjct: 146 IDGNGDAWRMVKKDKLTATQWQDKIASGGLLSADKKTWYPTEKSLKGSQAKDPGILKEGR 205
Query: 172 ----------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 221
F RPN++ N + I++ V FQNSP WN+HP CS++ +R V + P
Sbjct: 206 SIQDFEVYKDFLRPNMVVLNNCKRILLEGVTFQNSPAWNLHPFLCSDLTLRGVNVKNPWY 265
Query: 222 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 281
+ N DGID +SS+N IE+S GDD + +KSG DE G G P+ + +R
Sbjct: 266 AQNGDGIDLESSTNTLIENSTFDVGDDGICIKSGRDEAGRKLGKPTENVIVRNCVVYHAH 325
Query: 282 SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN------ 335
G +GSE SGG +N+ + + VG+ KT GRGG ++NI V+++ M++
Sbjct: 326 GGFVIGSEMSGGAKNIFVYNCSFLGTDVGLRFKTTRGRGGVVQNIYVTNINMKDIGAEAI 385
Query: 336 -------ARKGIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKN 386
A+ + ++G+ D P + P A P I ++ + I+GL
Sbjct: 386 LFDMYYMAKDPVALSGEKRDAPKVEVLPVTEATPQFKDFHISNIVCNGAATALFIRGLPE 445
Query: 387 SPFTGICLSNINLQGVAGPTSPPLKCSDVSG 417
G+ L+++ ++ G + C++ +G
Sbjct: 446 MNILGLYLNDMVIKAKKG-----MVCTEATG 471
>gi|52081815|ref|YP_080606.1| glycoside hydrolase family protein [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|319647732|ref|ZP_08001950.1| hypothetical protein HMPREF1012_02989 [Bacillus sp. BT1B_CT2]
gi|404490699|ref|YP_006714805.1| glycoside hydrolase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|423683814|ref|ZP_17658653.1| glycoside hydrolase family protein [Bacillus licheniformis WX-02]
gi|52005026|gb|AAU24968.1| Glycoside Hydrolase Family 28 [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|52349704|gb|AAU42338.1| putative glycoside hydrolase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317390073|gb|EFV70882.1| hypothetical protein HMPREF1012_02989 [Bacillus sp. BT1B_CT2]
gi|383440588|gb|EID48363.1| glycoside hydrolase family protein [Bacillus licheniformis WX-02]
Length = 436
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 130/414 (31%), Positives = 202/414 (48%), Gaps = 53/414 (12%)
Query: 30 VPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFN 89
VP+ + N +T FG +GK +T+A ++AI ++GG + VP GV+L+G+
Sbjct: 16 VPV-FPNRSFDVTSFGADENGKNDSTEAIQKAI---DQAHQAGGGRVTVPEGVFLSGALR 71
Query: 90 LTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITG 149
L S++ L++AKGAVIK +Q+ ++ L L + G E Y I+ ++ ITG
Sbjct: 72 LKSNVDLHIAKGAVIKFSQNPEDY-LPVVLTRF-EGVELY--NYSPLIYAYEADNIAITG 127
Query: 150 ENGTIDGQG--AIWWNMWR-------------------QRTLPFT----------RPNLI 178
+ GT+DGQG WW R +R +P T RPN I
Sbjct: 128 K-GTLDGQGDDEHWWPWKRGTNGQPSQEKDRNALFEMAERGIPVTERQFGKGHYLRPNFI 186
Query: 179 EFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCI 238
+ + I+I V NSP W +HPV C NV + + ++ PNTDG++P+S NV I
Sbjct: 187 QPYRCKHILIQGVTVLNSPMWQVHPVLCENVTVDGIKVIGHG--PNTDGVNPESCKNVVI 244
Query: 239 EDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVL 298
+ + GDD +AVKSG + G PS I I G+ +GSE SGGV+NV+
Sbjct: 245 KGCHFDNGDDCIAVKSGRNADGRRINIPSENIVIEHNEMKDGHGGVTIGSEISGGVKNVI 304
Query: 299 AEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK---GIKIAGDVGDHPDDK 353
AE ++ N+ + +KTN RGG + NI +++ ++ I + + GD D K
Sbjct: 305 AEGNLMDSPNLDRALRIKTNSVRGGVLENIYFHKNTVKSLKREVIAIDMEYEEGDAGDFK 364
Query: 354 FNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTS 407
PVV + +K + Q + +SP TG+ +++ + GV P
Sbjct: 365 ------PVVRTVDVKQLKSMGGQYGIRVLAYDHSPVTGLKVADSEIDGVDVPME 412
>gi|224536305|ref|ZP_03676844.1| hypothetical protein BACCELL_01177, partial [Bacteroides
cellulosilyticus DSM 14838]
gi|224522067|gb|EEF91172.1| hypothetical protein BACCELL_01177 [Bacteroides cellulosilyticus
DSM 14838]
Length = 434
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 112/352 (31%), Positives = 162/352 (46%), Gaps = 60/352 (17%)
Query: 33 RYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTS 92
++ + K+++ DFG VG+G+ L T AF +AI L GG L VP GV+ TG L S
Sbjct: 44 KFPDRKVNLADFGAVGNGEELCTAAFAKAI---DTLAEKGGGHLIVPAGVWFTGPIVLKS 100
Query: 93 HMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENG 152
++ L+L KGAVI + D +PL+ + R R S + G L++V ITGE G
Sbjct: 101 NIDLHLEKGAVILFSPDVDLYPLVETVFEGLDTR-----RCQSPVSGRNLENVAITGE-G 154
Query: 153 TIDGQGAIWWNMWRQRTLP----------------------------------------- 171
IDG G W + R++
Sbjct: 155 AIDGNGHYWRPLKREKVTEGVWKQTIARGGVYKRPTYWFPYPQTLKGDTISNMNVPQNLK 214
Query: 172 ----------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 221
F RP ++ + +++ + VIFQNSP WN+HP+ C NV+I V + P+
Sbjct: 215 TEEEWQSVRHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLIEEVQVRNPSY 274
Query: 222 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 281
+ N DG+D +S N I +S GDD + +KSG DE G G + + T
Sbjct: 275 AQNGDGLDLESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRGRVCENVVVDGCTVFKGH 334
Query: 282 SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
G VGSE SGGV NV + VG+ K+ GRGG + NI + ++ M
Sbjct: 335 GGFVVGSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWIRNIAM 386
>gi|289578915|ref|YP_003477542.1| glycoside hydrolase family protein [Thermoanaerobacter italicus
Ab9]
gi|289528628|gb|ADD02980.1| glycoside hydrolase family 28 [Thermoanaerobacter italicus Ab9]
Length = 519
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 127/407 (31%), Positives = 187/407 (45%), Gaps = 53/407 (13%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+++ DFG GDGKT++T + AIY G ++ P G+YLTG L S++TL L
Sbjct: 85 VNVRDFGAKGDGKTIDTSFIQAAIYSCPE-----GGRVFFPGGIYLTGPIFLKSNITLEL 139
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYM------------SFIHGDGLQDVV 146
+K AV+ D +P+ LP+ + + Y+ S I G +++V
Sbjct: 140 SKDAVLLGANDRNLYPI---LPNTIKSQNSDEELYLATWEGEAAECFASLITGINIENVN 196
Query: 147 ITGENGTIDGQG--AIWWN-------MWRQRTLPFTRPNLIEFMNS-RSIIISNVIFQNS 196
I GE GTIDG WW WR RT+ F+N ++I+I + +NS
Sbjct: 197 IIGE-GTIDGNANFETWWKEHKIKKGAWRPRTV---------FLNQCKNILIEGLTIKNS 246
Query: 197 PFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGW 256
P W IHP N+ +TI P +SPNTDG++P++S NV I S GDD +A+KSG
Sbjct: 247 PAWTIHPFQSENLKFINLTIENPQNSPNTDGLNPEASKNVLILGCKFSVGDDCIAIKSGK 306
Query: 257 DEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTN 316
+ G + + +R G+ +GSE SGGV+ V E N GI +KT
Sbjct: 307 FDMAQKLGKLTEKVFVRNCYMEYGHGGVVIGSEMSGGVKEVYVEKCIFNNTDRGIRIKTR 366
Query: 317 IGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDK----FNPNALPV------VNGIT 366
GRGGFI I + M + I D K ++ LP+ + I
Sbjct: 367 RGRGGFIDEIHADKIRMNRVKTPFTINSFYFCDSDGKTEYVWSKEKLPIDKRTPYIGNIY 426
Query: 367 IKDVWGTKVQ-QSGLIQGLKNSPFTGICLSNI--NLQGVAGPTSPPL 410
+KD+ T Q +G + GL + + NI + A P P +
Sbjct: 427 LKDIGCTNTQVAAGFMYGLPERKIEKVIMENIYVHFDENAKPGYPEM 473
>gi|345516133|ref|ZP_08795626.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|423227918|ref|ZP_17214324.1| hypothetical protein HMPREF1063_00144 [Bacteroides dorei
CL02T00C15]
gi|423239050|ref|ZP_17220166.1| hypothetical protein HMPREF1065_00789 [Bacteroides dorei
CL03T12C01]
gi|423243178|ref|ZP_17224254.1| hypothetical protein HMPREF1064_00460 [Bacteroides dorei
CL02T12C06]
gi|229434099|gb|EEO44176.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|392637665|gb|EIY31531.1| hypothetical protein HMPREF1063_00144 [Bacteroides dorei
CL02T00C15]
gi|392646053|gb|EIY39772.1| hypothetical protein HMPREF1064_00460 [Bacteroides dorei
CL02T12C06]
gi|392647461|gb|EIY41162.1| hypothetical protein HMPREF1065_00789 [Bacteroides dorei
CL03T12C01]
Length = 446
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 121/409 (29%), Positives = 190/409 (46%), Gaps = 59/409 (14%)
Query: 37 DKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTL 96
+++ + G G+ LNT I R L +GG L+ P G YLTGS ++ S++TL
Sbjct: 25 ERVDMQQAGADIQGRKLNTTLINSTIDR---LNANGGGTLFFPAGTYLTGSIHMKSNITL 81
Query: 97 YLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDG 156
L GA +K +++ ++ + G + + I+ +++ I GE GT+DG
Sbjct: 82 ELEAGATLKFSENFDDFLPYVEVRHEGIMMKS----FQPLIYAVDAENITIKGE-GTLDG 136
Query: 157 QGAIWWNMW-----------------------RQRTLP-----------------FTRPN 176
QG WW + ++ L F RP
Sbjct: 137 QGKAWWTEFFRVLVDLRDNGKRNINKYQPMFEKENDLKALYAETNEDWHGTLDRRFFRPP 196
Query: 177 LIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNV 236
I + +++ + V NSPFW ++P +C NV I+ +TI SPNTDGI+P+S NV
Sbjct: 197 FIHPIRCKNVRVEGVKIINSPFWTVNPEFCDNVTIKGITI-HNVPSPNTDGINPESCKNV 255
Query: 237 CIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVEN 296
I D +IS GDD + +KSG D G P ITI T S G+ +GSE SGGV+
Sbjct: 256 HISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCTMLSGHGGVVIGSEMSGGVKK 315
Query: 297 VLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK-----GIKIAGDVGDHPD 351
V + GI +K+ GRGG + +I VS++ M N +K +K + +
Sbjct: 316 VTISNCVFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIVLNLKYSKMPAEPKS 375
Query: 352 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 400
D+ V+G+T++D V ++ GL +P TGI + ++ +Q
Sbjct: 376 DRTPEFRNIYVSGVTVRD-----VNTPIMVVGLPEAPITGIVMRDVYIQ 419
>gi|212694786|ref|ZP_03302914.1| hypothetical protein BACDOR_04320 [Bacteroides dorei DSM 17855]
gi|265750531|ref|ZP_06086594.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|212662640|gb|EEB23214.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|263237427|gb|EEZ22877.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
Length = 446
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 121/409 (29%), Positives = 190/409 (46%), Gaps = 59/409 (14%)
Query: 37 DKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTL 96
+++ + G G+ LNT I R L +GG L+ P G YLTGS ++ S++TL
Sbjct: 25 ERVDMQQAGADIQGRKLNTALINSTIDR---LNANGGGTLFFPAGTYLTGSIHMKSNITL 81
Query: 97 YLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDG 156
L GA +K +++ ++ + G + + I+ +++ I GE GT+DG
Sbjct: 82 ELEAGATLKFSENFDDFLPYVEVRHEGIMMKS----FQPLIYAVDAENITIKGE-GTLDG 136
Query: 157 QGAIWWNMW-----------------------RQRTLP-----------------FTRPN 176
QG WW + ++ L F RP
Sbjct: 137 QGKAWWTEFFRVLVDLRDNGKRNINKYQPMFEKENDLKALYAETNEDWHGTLDRRFFRPP 196
Query: 177 LIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNV 236
I + +++ + V NSPFW ++P +C NV I+ +TI SPNTDGI+P+S NV
Sbjct: 197 FIHPIRCKNVRVEGVKIINSPFWTVNPEFCDNVTIKGITI-HNVPSPNTDGINPESCKNV 255
Query: 237 CIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVEN 296
I D +IS GDD + +KSG D G P ITI T S G+ +GSE SGGV+
Sbjct: 256 HISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCTMLSGHGGVVIGSEMSGGVKK 315
Query: 297 VLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK-----GIKIAGDVGDHPD 351
V + GI +K+ GRGG + +I VS++ M N +K +K + +
Sbjct: 316 VTISNCVFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIVLNLKYSKMPAEPKS 375
Query: 352 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 400
D+ V+G+T++D V ++ GL +P TGI + ++ +Q
Sbjct: 376 DRTPEFRNIYVSGVTVRD-----VNTPIMVVGLPEAPITGIVMRDVYIQ 419
>gi|257070016|ref|YP_003156271.1| endopolygalacturonase [Brachybacterium faecium DSM 4810]
gi|256560834|gb|ACU86681.1| endopolygalacturonase [Brachybacterium faecium DSM 4810]
Length = 431
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 111/342 (32%), Positives = 167/342 (48%), Gaps = 21/342 (6%)
Query: 71 SGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPG 130
+GG + VP GV+ TG+ L S + L+L GA+++ D +P + GR
Sbjct: 30 AGGGRVSVPAGVHRTGALRLRSGVELHLEAGALLQFVPDPALYPAVEARWEGAVGRV--- 86
Query: 131 GRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQR--TLPFTRPNLIEFMNSRSIII 188
+ ++ G +DV ITG GTIDG G WW+ +R R L RP LI + I
Sbjct: 87 --HSPCLYAHGERDVAITGL-GTIDGGGQTWWDTFRHRREELAHPRPTLIGLHECERVTI 143
Query: 189 SNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDD 248
+V +NSP W +HP C +V + + I PA+SPNTDGIDP+S NV I D +I GDD
Sbjct: 144 RDVALRNSPAWTVHPSLCEDVTLTNLHIHNPAESPNTDGIDPESCRNVRISDCHIDVGDD 203
Query: 249 LVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVG 308
+A+K+G + + +TI T G+ +GSE SGGV NV+ +
Sbjct: 204 CIALKAGTERTPDRVA--TENVTITGCTMVRGHGGVVIGSEMSGGVRNVVISNCVFQGAD 261
Query: 309 VGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-----AGDVGDHP---DDKFNP--NA 358
GI +KT RGG + N+ VS + M++ + + G G P D P
Sbjct: 262 RGIRLKTRRDRGGTVENVRVSTIVMDDVLCPLTVNPFYFCGPDGKEPHVGDRTARPVDAG 321
Query: 359 LPVVNGITIKDVWGTKVQQS-GLIQGLKNSPFTGICLSNINL 399
P + + + + T V S G + GL +P + L ++++
Sbjct: 322 TPHLRSLHLSHLTATNVHASAGHVFGLPEAPLSDFSLHDVSI 363
>gi|371940174|dbj|BAL45524.1| glycoside hydrolase [Bacillus licheniformis]
Length = 436
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 128/404 (31%), Positives = 196/404 (48%), Gaps = 52/404 (12%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
+T FG G GK T A ++AI ++GG + VP GV+L+G+ L S++ L+LA
Sbjct: 25 DVTAFGADGSGKKDATGAIQKAI---DQAHKAGGGRVAVPEGVFLSGALRLKSNVELHLA 81
Query: 100 KGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG- 158
+GAVIK +Q+ ++ L L + G E Y I+ +++ ITG+ GT+DGQG
Sbjct: 82 QGAVIKFSQNPEDY-LPVVLTRF-EGVELY--NYSPLIYAYEAENIAITGK-GTLDGQGD 136
Query: 159 -AIWWNMWR-------------------QRTLPFT----------RPNLIEFMNSRSIII 188
WW R +R +P T RPN I+ + I+I
Sbjct: 137 DEHWWPWKRGTNGQSSQEKDRNALFEMAERGVPVTERQFGKGHYLRPNFIQPYRCKDILI 196
Query: 189 SNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDD 248
V NSP W +HPV C NV + + ++ PNTDG++P+S NV I+ + GDD
Sbjct: 197 QGVTVLNSPMWQVHPVLCENVTVDGIKVIGHG--PNTDGVNPESCKNVVIKGCHFDNGDD 254
Query: 249 LVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEH--INLYN 306
+AVKSG + G PS I I G+ +GSE SGGV+NV+AE ++ N
Sbjct: 255 CIAVKSGRNADGRRINMPSENIVIEHNEMKDGHGGVTIGSEISGGVKNVIAEGNLMDSPN 314
Query: 307 VGVGIHVKTNIGRGGFIRNITVSDVYMENARK---GIKIAGDVGDHPDDKFNPNALPVVN 363
+ + +KTN RGG + NI +++ ++ I + + GD D K PVV
Sbjct: 315 LDRALRIKTNSVRGGVLENIYFHKNTVKSLKREVIAIDMEYEEGDAGDFK------PVVR 368
Query: 364 GITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTS 407
I ++ + Q + +SP TG+ +++ + GV P
Sbjct: 369 NIDVEQLKSMGGQYGIRVLAYDHSPVTGLKVTDSEIDGVDIPME 412
>gi|294777094|ref|ZP_06742551.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|319643453|ref|ZP_07998076.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345517811|ref|ZP_08797274.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|254836521|gb|EET16830.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|294448963|gb|EFG17506.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|317384858|gb|EFV65814.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 446
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 121/409 (29%), Positives = 189/409 (46%), Gaps = 59/409 (14%)
Query: 37 DKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTL 96
+++ + G G+ LNT I R L GG L+ P G YLTGS ++ S++TL
Sbjct: 25 ERVDMQQAGADVQGRKLNTALINSTIDR---LNAHGGGTLFFPAGTYLTGSIHMKSNITL 81
Query: 97 YLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDG 156
L GA +K +++ ++ + G + + I+ +++ I GE GT+DG
Sbjct: 82 ELEAGATLKFSENFDDFLPYVEVRHEGIMMKS----FQPLIYAVDAENITIKGE-GTLDG 136
Query: 157 QGAIWWNMW-----------------------RQRTLP-----------------FTRPN 176
QG WW + ++ L F RP
Sbjct: 137 QGKAWWTEFFRVLVDLRDNGKRNINKYQPMFEKENDLKALYAETNEDWHGTLDRRFFRPP 196
Query: 177 LIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNV 236
I + +++ + V NSPFW ++P +C NV I+ +TI SPNTDGI+P+S NV
Sbjct: 197 FIHPIRCKNVRVEGVKIINSPFWTVNPEFCDNVTIKGITI-HNVPSPNTDGINPESCKNV 255
Query: 237 CIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVEN 296
I D +IS GDD + +KSG D G P ITI T S G+ +GSE SGGV+
Sbjct: 256 HISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCTMLSGHGGVVIGSEMSGGVKK 315
Query: 297 VLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK-----GIKIAGDVGDHPD 351
V + GI +K+ GRGG + +I VS++ M N +K +K + +
Sbjct: 316 VTISNCVFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIVLNLKYSKMPAEPKS 375
Query: 352 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 400
D+ V+G+T++D V ++ GL +P TGI + ++ +Q
Sbjct: 376 DRTPEFRNIYVSGVTVRD-----VNTPIMVVGLPEAPITGIVMRDVYIQ 419
>gi|150005260|ref|YP_001300004.1| polygalacturonase [Bacteroides vulgatus ATCC 8482]
gi|149933684|gb|ABR40382.1| glycoside hydrolase family 28, candidate polygalacturonase
[Bacteroides vulgatus ATCC 8482]
Length = 446
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 121/409 (29%), Positives = 189/409 (46%), Gaps = 59/409 (14%)
Query: 37 DKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTL 96
+++ + G G+ LNT I R L GG L+ P G YLTGS ++ S++TL
Sbjct: 25 ERVDMQQAGADVQGRKLNTALINSTIDR---LNAHGGGTLFFPAGTYLTGSIHMKSNITL 81
Query: 97 YLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDG 156
L GA +K +++ ++ + G + + I+ +++ I GE GT+DG
Sbjct: 82 ELEAGATLKFSENFDDFLPYVEVRHEGIMMKS----FQPLIYAVDAENITIKGE-GTLDG 136
Query: 157 QGAIWWNMW-----------------------RQRTLP-----------------FTRPN 176
QG WW + ++ L F RP
Sbjct: 137 QGKAWWTEFFRVLVDLRDNGKRNINKYQPMFEKENDLKALYAETNEDWHGTLDRRFFRPP 196
Query: 177 LIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNV 236
I + +++ + V NSPFW ++P +C NV I+ +TI SPNTDGI+P+S NV
Sbjct: 197 FIHPIRCKNVRVEGVKIINSPFWTVNPEFCDNVTIKGITI-HNVPSPNTDGINPESCKNV 255
Query: 237 CIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVEN 296
I D +IS GDD + +KSG D G P ITI T S G+ +GSE SGGV+
Sbjct: 256 HISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCTMLSGHGGVVIGSEMSGGVKK 315
Query: 297 VLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK-----GIKIAGDVGDHPD 351
V + GI +K+ GRGG + +I VS++ M N +K +K + +
Sbjct: 316 VTISNCVFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIVLNLKYSKMPAEPKS 375
Query: 352 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 400
D+ V+G+T++D V ++ GL +P TGI + ++ +Q
Sbjct: 376 DRTPEFRNIYVSGVTVRD-----VNTPIMVVGLPEAPITGIVMRDVYIQ 419
>gi|423311776|ref|ZP_17289713.1| hypothetical protein HMPREF1058_00325 [Bacteroides vulgatus
CL09T03C04]
gi|392689891|gb|EIY83166.1| hypothetical protein HMPREF1058_00325 [Bacteroides vulgatus
CL09T03C04]
Length = 446
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 121/409 (29%), Positives = 189/409 (46%), Gaps = 59/409 (14%)
Query: 37 DKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTL 96
+++ + G G+ LNT I R L GG L+ P G YLTGS ++ S++TL
Sbjct: 25 ERVDMQQAGADIQGRKLNTALINSTIDR---LNAHGGGTLFFPAGTYLTGSIHMKSNITL 81
Query: 97 YLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDG 156
L GA +K +++ ++ + G + + I+ +++ I GE GT+DG
Sbjct: 82 ELEAGATLKFSENFDDFLPYVEVRHEGIMMKS----FQPLIYAVDAENITIKGE-GTLDG 136
Query: 157 QGAIWWNMW-----------------------RQRTLP-----------------FTRPN 176
QG WW + ++ L F RP
Sbjct: 137 QGKAWWTEFFRVLVDLRDNGKRNINKYQPMFEKENDLKALYAETNEDWHGTLDRRFFRPP 196
Query: 177 LIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNV 236
I + +++ + V NSPFW ++P +C NV I+ +TI SPNTDGI+P+S NV
Sbjct: 197 FIHPIRCKNVRVEGVKIINSPFWTVNPEFCDNVTIKGITI-HNVPSPNTDGINPESCKNV 255
Query: 237 CIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVEN 296
I D +IS GDD + +KSG D G P ITI T S G+ +GSE SGGV+
Sbjct: 256 HISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCTMLSGHGGVVIGSEMSGGVKK 315
Query: 297 VLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK-----GIKIAGDVGDHPD 351
V + GI +K+ GRGG + +I VS++ M N +K +K + +
Sbjct: 316 VTISNCIFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMRNIKKEAIVLNLKYSKMPAEPKS 375
Query: 352 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 400
D+ V+G+T++D V ++ GL +P TGI + ++ +Q
Sbjct: 376 DRTPEFRNIYVSGVTVRD-----VNTPIMVVGLPEAPITGIVMRDVYIQ 419
>gi|326800288|ref|YP_004318107.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326551052|gb|ADZ79437.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 543
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 123/463 (26%), Positives = 206/463 (44%), Gaps = 76/463 (16%)
Query: 9 SILLSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHL 68
+++L F + A + + ++ D +SIT FG + G+ LNT++ +AI
Sbjct: 7 TVILLIFTHGAFAQKLAEPTVSLPTFKKDTVSITAFGAISGGRHLNTESINQAI---DQT 63
Query: 69 RRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRER 128
+ GG ++ +P GV+L+G L S++ L+LA A+++ T+D + L+
Sbjct: 64 HKKGGGVVLIPAGVWLSGPITLKSNINLHLAANALLQFTKDFSQYSLVQT-----SWEGI 118
Query: 129 PGGRYMSFIHGDGLQDVVITGENGTIDGQGAIW------------W-------------- 162
P R S I Q++ ITG+ G IDG G W W
Sbjct: 119 PQMRNQSPIWALNQQNIAITGK-GVIDGNGDAWRMVKKAKMTETQWKKLISSGGVLNEKG 177
Query: 163 NMW--RQRTLP------------------------FTRPNLIEFMNSRSIIISNVIFQNS 196
++W Q +L + RPN+I I++ V FQNS
Sbjct: 178 DIWYPSQSSLKGASYKDPGLVEKGKNAQFYEEIKDYLRPNMILLEKCERILLEGVTFQNS 237
Query: 197 PFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGW 256
WNIHP+ +++ IR + + P S N DG+D +S NV +E S GDD + +KSG
Sbjct: 238 AAWNIHPLMSADLTIRNINVRNPWYSQNGDGLDIESCKNVLVEQSTFDVGDDAICIKSGR 297
Query: 257 DEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTN 316
+E G G P+ + +R T G VGSE SGG +N+ ++ +G+ KT
Sbjct: 298 NEAGRERGMPTENLWVRNCTVYHAHGGFVVGSEMSGGAKNLYVDNCTFIGTDIGLRFKTT 357
Query: 317 IGRGGFIRNITVSDVYMEN-------------ARKGIKIAGDVGDHPDDKFNP--NALPV 361
GRGG + N+ +++++M++ A+ I ++G+ + P +F P A P
Sbjct: 358 RGRGGVVENVYINNIFMKDIPGEAILFDMYYEAKDPIVLSGEHREPPKVEFLPVTEATPQ 417
Query: 362 VNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 404
I +V ++ I+GL I L+ +++ G
Sbjct: 418 FKDFYINNVVCDGAAKALFIRGLPEMHIKNIQLTRLDMVAKEG 460
>gi|365122251|ref|ZP_09339156.1| hypothetical protein HMPREF1033_02502 [Tannerella sp.
6_1_58FAA_CT1]
gi|363642965|gb|EHL82299.1| hypothetical protein HMPREF1033_02502 [Tannerella sp.
6_1_58FAA_CT1]
Length = 561
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 130/435 (29%), Positives = 193/435 (44%), Gaps = 77/435 (17%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
K++IT FGGVGDG TLN++AF +AI + L + GG L +P G++ TG L S++ +Y
Sbjct: 54 KVTITQFGGVGDGTTLNSEAFAKAI---EALEKKGGGTLVIPQGIWYTGPIVLKSNIHIY 110
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
L GA+I + D +P++ S+ R R S I G ++ ITG+ GTIDG
Sbjct: 111 LQGGAIILFSDDFDLYPIVHT--SFEGLDTR---RCQSPISAKGAVNIAITGK-GTIDGN 164
Query: 158 GAIW------------WNMWRQR--------------------------TLP-------- 171
G W W Q+ +P
Sbjct: 165 GDAWRPVKKSKLTASQWKALLQKGGVLNDKKDIWYPSAKSKLGNERSDMNVPRGLKTDEE 224
Query: 172 ------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNT 225
F RP L+ F++ ++++ V FQNSP WN+HP+ C NV I +T+ P S N
Sbjct: 225 WEEVKDFLRPVLLSFIDCTNVLLQGVTFQNSPSWNLHPLMCENVTIENLTVRNPWYSQNG 284
Query: 226 DGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIA 285
DG+D +S N + + GDD + +KSG D G G P + + G
Sbjct: 285 DGLDIESCKNTIVTNCSFDVGDDGICIKSGKDADGRKRGIPCENVIVDNCVVYHGHGGFV 344
Query: 286 VGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK------- 338
VGSE SGGV+N+ + VG+ K+ GRGG + NI + ++ M N
Sbjct: 345 VGSEMSGGVKNISVSNCQFLGTDVGLRFKSTRGRGGVVENIFIKNIDMINIPTDALLFDL 404
Query: 339 --GIKIAGDV---GDHPDDKFNPNAL----PVVNGITIKDVWGTKVQQSGLIQGLKNSPF 389
G K A +V GD ++ N A+ P ITI V +++ GL
Sbjct: 405 YYGGKSASEVLADGDEVKEESNIPAVTEETPAFRNITISRVNCQGARRAMYFNGLPEMNV 464
Query: 390 TGICLSNINLQGVAG 404
+ +S+ N+ G
Sbjct: 465 QNVTVSDCNITAQLG 479
>gi|254295110|ref|YP_003061133.1| glycoside hydrolase family protein [Hirschia baltica ATCC 49814]
gi|254043641|gb|ACT60436.1| glycoside hydrolase family 28 [Hirschia baltica ATCC 49814]
Length = 469
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 123/416 (29%), Positives = 198/416 (47%), Gaps = 52/416 (12%)
Query: 29 IVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSF 88
I P + +TDF GDG NT AF+ AI R++GG + VP G YLTG+
Sbjct: 45 ITPPSIPKAQFLLTDFDARGDGIFDNTAAFKAAI---DACRKAGGGQIRVPDGHYLTGAI 101
Query: 89 NLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVIT 148
L S++ L ++ GA + + D ++P++ L Y G E Y I+ ++V IT
Sbjct: 102 QLHSNIELNVSAGARLIFSTDPMDYPVV--LTRY-EGVEVMN--YSPLIYARDAKNVAIT 156
Query: 149 GENGTIDGQGA--IWWNM-------WR------------------------QRTL---PF 172
GE G +DGQ + WW WR QR +
Sbjct: 157 GE-GVLDGQASNEHWWPWCGAERFGWREGVGHQTPDRQALFEMAESGIPVEQRRFGPGHY 215
Query: 173 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDS 232
RP+ +EF N ++++ ++ ++SPFWNIHPV NV++R V ++ PN DG +P+S
Sbjct: 216 LRPSFVEFYNCENVLVEDIHLKDSPFWNIHPVLSRNVIVRGVEVVG--HGPNNDGCNPES 273
Query: 233 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSG 292
++ IE+ Y TGDD +A+KSG + G PS I IR + G+ +GSE SG
Sbjct: 274 VDHMLIENCYFDTGDDCIAIKSGRNADGRRVAVPSENILIRNCQMKAGHGGVVIGSEISG 333
Query: 293 GVENVLAE--HINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 350
V NV AE ++ ++ + +K N RGG + NI + ++ + + + I +
Sbjct: 334 DVFNVYAEGCAMDSPDLWYMLRIKNNAMRGGVVENIHLRNIEVGQVARAVMIC---DFNY 390
Query: 351 DDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPT 406
++ N PV+ ++++ + K + QG + I L + GV+ P+
Sbjct: 391 EEGINGPFTPVLRNVSMQSIAVKKAVRVLDSQGFAKAEIENISLKDCIFNGVSSPS 446
>gi|392939365|ref|ZP_10305009.1| endopolygalacturonase [Thermoanaerobacter siderophilus SR4]
gi|392291115|gb|EIV99558.1| endopolygalacturonase [Thermoanaerobacter siderophilus SR4]
Length = 519
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 123/392 (31%), Positives = 182/392 (46%), Gaps = 51/392 (13%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+++ DFG GDGKT++T + AIY G ++ P G+YLTG L S++TL L
Sbjct: 85 VNVRDFGAKGDGKTIDTSFIQAAIYSCPE-----GGRVFFPGGIYLTGPIFLKSNITLEL 139
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYM------------SFIHGDGLQDVV 146
+K AV+ D +P+ LP+ + + Y+ S I G +++V
Sbjct: 140 SKDAVLLGANDRNLYPI---LPNTIKSQNSDEELYLATWEGEAAECFASLITGINIENVN 196
Query: 147 ITGENGTIDGQG--AIWWN-------MWRQRTLPFTRPNLIEFMNS-RSIIISNVIFQNS 196
I GE GTIDG WW WR RT+ F+N ++I+I V +NS
Sbjct: 197 IIGE-GTIDGNANFETWWKEHKIKKGAWRPRTV---------FLNQCKNILIEGVTIKNS 246
Query: 197 PFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGW 256
P W IHP N+ +TI P +SPNTDG++P++S NV I S GDD +A+K+G
Sbjct: 247 PAWTIHPFQSENLKFINLTIENPKNSPNTDGLNPEASKNVLILGCKFSVGDDCIAIKAGK 306
Query: 257 DEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTN 316
+ G + + +R G+ +GSE SGGV+ V E N GI +KT
Sbjct: 307 FDMAQKLGKLTEKVFVRNCYMEYGHGGVVIGSEMSGGVKEVYVEKCIFNNTDRGIRIKTR 366
Query: 317 IGRGGFIRNITVSDVYMENARKGIKIAG----DVGDHPDDKFNPNALPV------VNGIT 366
GRGGFI I + M + I DV + ++ LP+ + I
Sbjct: 367 RGRGGFIDEIHADKIRMNRVKTPFTINSFYFCDVDGKTEYVWSKEKLPIDERTPYIGNIY 426
Query: 367 IKDVWGTKVQ-QSGLIQGLKNSPFTGICLSNI 397
+K++ T Q +G I GL + + I
Sbjct: 427 LKNINCTDTQVAAGFIYGLPERKIEKVIMEEI 458
>gi|448540079|ref|ZP_21623316.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-646]
gi|448552184|ref|ZP_21629848.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-645]
gi|448553851|ref|ZP_21630729.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-644]
gi|445709350|gb|ELZ61181.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-645]
gi|445709953|gb|ELZ61776.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-646]
gi|445719854|gb|ELZ71532.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-644]
Length = 516
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 178/397 (44%), Gaps = 41/397 (10%)
Query: 46 GVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIK 105
G+ D +L+T A + A+ +GG + Y+PPG Y + + T LA GA ++
Sbjct: 12 GIDDDGSLDTAAIQAAL---DDCAGTGGEV-YLPPGTYRSAPLRVGDDTTFRLANGAELR 67
Query: 106 ATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNM- 164
QD +P + S G + G + +H +V ITGE G IDG G+ WW
Sbjct: 68 FVQDFTEFPTVE---SRWEGWNQDG--FHPCLHVADAANVTITGE-GVIDGGGSYWWEFV 121
Query: 165 ----------------------WRQRTLPFT-RPNLIEFMNSRSIIISNVIFQNSPFWNI 201
+ FT RP L++ ++ +S V +NSPFWN
Sbjct: 122 SVPPEQYPSELTERLEAIRSGNKQDAVSTFTVRPPLLQIDGCENVTVSGVTLRNSPFWNT 181
Query: 202 HPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 261
H VY +V I V+I P D+PN DGID DSS V + D++I GDD + +KSG DE G
Sbjct: 182 HVVYSDDVTIHDVSIRNPPDAPNGDGIDIDSSRFVRVSDTHIDAGDDAICLKSGKDEEGR 241
Query: 262 AYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGG 321
G P+ + + T G+ +GSET+G V +V + + GI +K+ GRGG
Sbjct: 242 EVGRPTENVVVTNCTVEHGHGGVVIGSETAGDVRHVTVTNCTFTDTDRGIRIKSKRGRGG 301
Query: 322 FIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSG 379
+ ++ + M I G D P A P V + + +V+ +
Sbjct: 302 TVEDLRFDTIVMRRVACPFVINGYYQTDIDSDPEPVTEATPNVRNVDFHHITAEEVESAA 361
Query: 380 LIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVS 416
+ GL F GI +++++ + P SD+S
Sbjct: 362 FLAGLPEQRFEGISFTDVDIDA-----TRPFDASDLS 393
>gi|448621831|ref|ZP_21668580.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax
denitrificans ATCC 35960]
gi|445754861|gb|EMA06255.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax
denitrificans ATCC 35960]
Length = 512
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 177/397 (44%), Gaps = 41/397 (10%)
Query: 46 GVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIK 105
G D +L+T A + A+ GG + Y+PPG Y + + TL LA GA ++
Sbjct: 5 GTDDDDSLDTAAIQAAL---DDCAGEGGEV-YLPPGTYRSAPLRVGDDTTLRLANGAELR 60
Query: 106 ATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNM- 164
QD +P + S G + G + +H +V ITGE G IDG G+ WW
Sbjct: 61 FVQDFTEFPTVE---SRWEGWNQDG--FHPCLHVADAANVTITGE-GVIDGGGSYWWEFV 114
Query: 165 ----------------------WRQRTLPFT-RPNLIEFMNSRSIIISNVIFQNSPFWNI 201
+ FT RP L++ ++ +S V +NSPFWN
Sbjct: 115 SVPPEEYPPALAERLAEIRSGNKQDAVSTFTVRPPLLQIDGCENVTVSGVTLRNSPFWNT 174
Query: 202 HPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 261
H VY +V + V+I P D+PN DGID DSS V + D++I GDD + +KSG DE G
Sbjct: 175 HVVYSEDVTVHDVSIQNPPDAPNGDGIDIDSSRFVRVSDTHIDAGDDAICLKSGKDEEGR 234
Query: 262 AYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGG 321
G P+ + + T G+ +GSET+G V +V + + GI +K+ GRGG
Sbjct: 235 EVGRPTENVVVTNCTVEHGHGGVVIGSETAGDVRHVTVTNCTFTDTDRGIRIKSKRGRGG 294
Query: 322 FIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSG 379
+ ++ + M I G D P A P V + + +V+ +
Sbjct: 295 TVEDLRFDTIVMRRVACPFVINGYYQTDIDSDPEPVTEATPNVRNVDFHHITAEEVESAA 354
Query: 380 LIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVS 416
+ GL F GI +++++ + P SD+S
Sbjct: 355 FLAGLPERRFEGISFTDVDIDA-----TRPFDASDLS 386
>gi|189461873|ref|ZP_03010658.1| hypothetical protein BACCOP_02539 [Bacteroides coprocola DSM 17136]
gi|189431467|gb|EDV00452.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 494
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 127/435 (29%), Positives = 193/435 (44%), Gaps = 76/435 (17%)
Query: 34 YRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSH 93
+ ++++++ DFG VGDG L T+AF +AI L + GG L VP GV+ TG L S+
Sbjct: 45 FPDNEVNLKDFGAVGDGMHLCTEAFAKAI---DALDKKGGGKLTVPAGVWFTGPIVLKSN 101
Query: 94 MTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGT 153
+ L++ KGA++ + D +PL+ + R R S I G L +V ITG+ G
Sbjct: 102 INLHIEKGAIVLFSPDVDLYPLVETVFEGLDTR-----RCQSPISGRNLVNVAITGQ-GA 155
Query: 154 IDGQGAIWWNMWRQRTLP------------------------------------------ 171
IDG G W + +Q+
Sbjct: 156 IDGNGHYWRPLKKQKVTEGQWKAATSRGGVYKRPDYWFPYPETLKGDTISNMNVPQNLKT 215
Query: 172 ---------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS 222
F RP ++ F+ +++ + V+FQNSP WN+HP+ C NV+I V + P+ +
Sbjct: 216 EEEWQSVRHFLRPVMVSFIECKNVWLEGVVFQNSPAWNLHPLMCENVLIENVEVRNPSYA 275
Query: 223 PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS 282
N DG+D +S N I +S GDD + +KSG DE G + + T
Sbjct: 276 QNGDGLDLESCKNALIVNSSFDVGDDGICLKSGKDEDGRRRARACENVIVDGCTVYKGHG 335
Query: 283 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGG-----FIRNITVSDVYME--- 334
G VGSE SGGV N+ + VG+ K+ GRGG +IRNI++ D+ E
Sbjct: 336 GFVVGSEMSGGVRNISVNNCQFLGTDVGLRFKSKRGRGGVVENIWIRNISMIDIPTEPVT 395
Query: 335 -NARKGIKIAGDV---GDHPDDKFNP----NALPVVNGITIKDVWGTKVQQSGLIQGLKN 386
N G K A +V G+ K P P I I+ + + +++ G+
Sbjct: 396 FNLYYGGKSAVEVLESGEVVPVKVAPMPVDETTPCFRNIHIEHLTCSNARRAMYFNGIPE 455
Query: 387 SPFTGICLSNINLQG 401
P GI L +I +
Sbjct: 456 MPIDGITLKHIRISA 470
>gi|146301992|ref|YP_001196583.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156410|gb|ABQ07264.1| Candidate polygalacturonase; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 475
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 123/424 (29%), Positives = 205/424 (48%), Gaps = 61/424 (14%)
Query: 24 VTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVY 83
+T + +++ +I DFG V DGKTLNT AF +A IQ +GG + VP G Y
Sbjct: 43 LTIKNLPKTNFQDKTYNINDFGAVADGKTLNTAAFEKA---IQTCTENGGGKVLVPNGKY 99
Query: 84 LTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQ 143
LTG+ +L +++ L+L A I + + ++P++ + G E Y I+
Sbjct: 100 LTGAIHLENNVNLHLEDKAEILFSLNPKDYPIVH---TSWEGTELMN--YSPLIYAKNKT 154
Query: 144 DVVITGENGTIDGQG--AIWWNMWR---------------------------QRTLP--- 171
+V ITG+ G ++GQ WW +W ++ +P
Sbjct: 155 NVAITGK-GILNGQADSTNWW-IWSGAKMYGWKKGIPSQNDPTNREVLVDMAEKDIPVEQ 212
Query: 172 -------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 224
+ RPN IEF ++++ ++ NSPFW +HP+ +N++I VT+ + PN
Sbjct: 213 RIFGEGRYLRPNFIEFFECNTVLVKDITVINSPFWILHPIKTNNMIIDGVTV--NSHGPN 270
Query: 225 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 284
DG DP+ S N+ I++ +TGDD +A+K+G D G PS I ++ G+
Sbjct: 271 NDGCDPEYSQNIVIKNCTFNTGDDCIAIKAGRDADGRRVAIPSKNIIVQNCKMIDGHGGV 330
Query: 285 AVGSETSGGVENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 342
+GSE S GV NV E+ ++ N+ I +KTN RGG I N+ V ++ + ++ + +
Sbjct: 331 VIGSEISAGVNNVFVENCVMDSPNLDRAIRIKTNSRRGGIIENVFVRNLEVGTVKECV-L 389
Query: 343 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL----IQGLKNSPFTGICLSNIN 398
++ + N +PV+ I +++V V+ G +G K SP I L N+
Sbjct: 390 KLNMFYNVYGSQTGNFIPVIRNINLENV---NVKNGGKYSIWAEGYKESPVENITLKNVK 446
Query: 399 LQGV 402
+Q V
Sbjct: 447 IQKV 450
>gi|329925656|ref|ZP_08280474.1| polygalacturonase (pectinase) [Paenibacillus sp. HGF5]
gi|328939683|gb|EGG36026.1| polygalacturonase (pectinase) [Paenibacillus sp. HGF5]
Length = 523
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 125/423 (29%), Positives = 190/423 (44%), Gaps = 81/423 (19%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
++I+D+G VG+G NT+ F +AI + ++GG + +PPG++ TG L S + L+
Sbjct: 21 VTISDYGAVGNGVYDNTRVFHQAI---EACAKAGGGTVVIPPGIWRTGPIKLQSRIELHA 77
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
+ GA++ ++ ++PL L S GR+ R S + G+GL+DV ITG +G DG G
Sbjct: 78 SAGALVVFSKFFEDYPL---LMSTYEGRQM--FRCQSPLDGEGLEDVAITG-SGIFDGSG 131
Query: 159 AIW------------WN-------------MW--------RQRTLP-------------- 171
W W +W Q TL
Sbjct: 132 EAWRPVKQGKLTESQWERLIQSGGVVDDQGLWWPTPAARDGQETLDRIEQTGSEEPQDYV 191
Query: 172 ----FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDG 227
+ RPNL+ N + I++S FQNS W +HP + I+ +T+ P + N DG
Sbjct: 192 PVRDYLRPNLLSLRNCKRILLSGPTFQNSAAWCLHPWASEQITIQNITVRNPWYAQNGDG 251
Query: 228 IDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVG 287
+D DS V +E+S GDD + +KSG +E G G PS I IR T GI VG
Sbjct: 252 LDIDSCKYVTVENSSFDVGDDAICLKSGKNEAGRLLGKPSERIRIRNCTVYHGHGGIVVG 311
Query: 288 SETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV- 346
SE SGG+++V +GI K+ GRGG + NI + + M + I GD
Sbjct: 312 SEMSGGIKDVYVSDCTFIGTDIGIRFKSCRGRGGVVENILIERIRMRD------IDGDAI 365
Query: 347 ------------GDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGI 392
G++ ++ P PV I I+D+ + + LI GL P +
Sbjct: 366 SFNLYYEGKAGSGEYQEEVMLPVTEETPVFRNIVIQDIVCSGAHTALLINGLPEMPVENL 425
Query: 393 CLS 395
+
Sbjct: 426 TVK 428
>gi|255532707|ref|YP_003093079.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255345691|gb|ACU05017.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 542
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/398 (28%), Positives = 188/398 (47%), Gaps = 45/398 (11%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
++ +G D L T+A ++AI ++GG +Y P G YLTG+ +L S++T+++
Sbjct: 42 NVLKYGARNDSSKLATQAIKKAI---DAASKAGGGTVYFPAGKYLTGAIHLKSNITIFID 98
Query: 100 KGAVIKATQDTWNW-PLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
GA + + + ++ P++ R + + +++ ITG G IDG G
Sbjct: 99 AGAELHFSDNFDDYLPMVK-----SRYEGVDVTSFSPLFYAYKAENIAITGR-GIIDGHG 152
Query: 159 AIWWNM------------W--------RQRTLP---------FTRPNLIEFMNSRSIIIS 189
WW+ W R+ LP F RP I+ M +++ I
Sbjct: 153 KKWWDFVEGYKADQPRSKWQYMFDDLNREILLPDDPKQMKRGFLRPPFIQTMYCKNVFIE 212
Query: 190 NVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD-SPNTDGIDPDSSSNVCIEDSYISTGDD 248
+ +NSPFW ++P +C NV I VTI P +PNTDGI+P+S +NV I + +IS GDD
Sbjct: 213 GITIRNSPFWTVNPEFCENVTIHAVTINNPGSFAPNTDGINPESCNNVHISNCHISVGDD 272
Query: 249 LVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVG 308
+ +KSG D G P+ TI T S G+ +GSE SG V + +
Sbjct: 273 CITIKSGKDAPGRKMAAPAQNYTITNCTMLSGHGGVVIGSEMSGDVRKISISNCVFDGTD 332
Query: 309 VGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNP--NALPVVNGIT 366
GI +K+ GRGG + I V ++ M+N ++ I D+ + P P I
Sbjct: 333 RGIRIKSARGRGGIVEEIRVDNIIMKNIKQQ-AIVLDL-QYAKTTLEPVSERTPRFRNIH 390
Query: 367 IKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 404
++ G +V ++ + GL+ P I ++IN++ G
Sbjct: 391 FSNITG-QVNEAAYLNGLEEMPIENISFNDINMEAKTG 427
>gi|237709360|ref|ZP_04539841.1| beta-xylosidase [Bacteroides sp. 9_1_42FAA]
gi|229456745|gb|EEO62466.1| beta-xylosidase [Bacteroides sp. 9_1_42FAA]
Length = 938
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/308 (35%), Positives = 162/308 (52%), Gaps = 33/308 (10%)
Query: 59 REAIYR-IQHLRRSGGTLLYVPPGVY-LTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLI 116
R+ I R I +GG + + G+Y L G+ L S + L+L K A + + + +
Sbjct: 538 RQLIQRAIDSCSLAGGGHVIISKGIYYLKGNLVLKSDVNLHLEKDAYLLFSGKADD--FL 595
Query: 117 APLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQ--------- 167
+ + G E G M I+ ++ ITG+ GTID QG + W Q
Sbjct: 596 PEVWTRWEGTELYGHSPM--IYAKHATNIAITGQ-GTIDAQGGREFASWSQIEVSDRNRL 652
Query: 168 -----RTLPFT----------RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIR 212
+ +P T RP+ I+FM I++ + +NSPFW IHPVYC NV++R
Sbjct: 653 RKMGEKLIPVTERIFGKGTILRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVR 712
Query: 213 YVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITI 272
+TI + PN DG DP+S+SNV IE+ TGDD +A+K+G D G G PS I I
Sbjct: 713 SITI--DSHYPNNDGCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVI 770
Query: 273 RRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVY 332
R S +G+ +GSE SGGVEN+ ++I + V ++ K+N RGG+IRNI VS++
Sbjct: 771 RNCLFQSECNGLCIGSEMSGGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNIT 830
Query: 333 MENARKGI 340
+E ++ +
Sbjct: 831 IERSKGAV 838
>gi|423242205|ref|ZP_17223315.1| hypothetical protein HMPREF1065_03938 [Bacteroides dorei
CL03T12C01]
gi|392639949|gb|EIY33757.1| hypothetical protein HMPREF1065_03938 [Bacteroides dorei
CL03T12C01]
Length = 955
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/308 (35%), Positives = 162/308 (52%), Gaps = 33/308 (10%)
Query: 59 REAIYR-IQHLRRSGGTLLYVPPGVY-LTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLI 116
R+ I R I +GG + + G+Y L G+ L S + L+L K A + + + +
Sbjct: 555 RQLIQRAIDSCSLAGGGHVIISKGIYYLKGNLVLKSDVNLHLEKDAYLLFSGKADD--FL 612
Query: 117 APLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQ--------- 167
+ + G E G M I+ ++ ITG+ GTID QG + W Q
Sbjct: 613 PEVWTRWEGTELYGHSPM--IYAKHATNIAITGQ-GTIDAQGGREFASWSQIEVSDRNRL 669
Query: 168 -----RTLPFT----------RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIR 212
+ +P T RP+ I+FM I++ + +NSPFW IHPVYC NV++R
Sbjct: 670 RKMGEKLIPVTERIFGKGTILRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVR 729
Query: 213 YVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITI 272
+TI + PN DG DP+S+SNV IE+ TGDD +A+K+G D G G PS I I
Sbjct: 730 SITI--DSHYPNNDGCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVI 787
Query: 273 RRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVY 332
R S +G+ +GSE SGGVEN+ ++I + V ++ K+N RGG+IRNI VS++
Sbjct: 788 RNCLFQSECNGLCIGSEMSGGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNIT 847
Query: 333 MENARKGI 340
+E ++ +
Sbjct: 848 IERSKGAV 855
>gi|399032129|ref|ZP_10731768.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398069540|gb|EJL60890.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 479
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 128/455 (28%), Positives = 219/455 (48%), Gaps = 73/455 (16%)
Query: 2 FRFLVTLSILLSYFNCFSLASVVT-----------CSGIVPMRYRNDKISITDFGGVGDG 50
F F + + ILL +F+C S + ++ I ++ + +I D+G V DG
Sbjct: 11 FAFFIPVYILL-FFSCSSKNADISGDSPWKKMDLIVKSIPQTKFSDKSYNIKDYGAVADG 69
Query: 51 KTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDT 110
TLNT AF +AI + +GG + VP G YLTG+ +L S++ L+L A I + +
Sbjct: 70 TTLNTGAFEKAI---KECAENGGGKVIVPNGKYLTGAIHLESNVNLHLDDNAEILFSTNP 126
Query: 111 WNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG--AIWWNMWR-- 166
++P++ + G E Y ++ +V ITG+ GT++GQ + WW +W
Sbjct: 127 KDYPIVH---TSFEGTEVM--NYSPLVYAKNKTNVAITGK-GTLNGQANSSNWW-VWSGG 179
Query: 167 -------------------------QRTLPFT----------RPNLIEFMNSRSIIISNV 191
++ +P T RPN IEF +++I ++
Sbjct: 180 KSYGWQKGNPSQNDPANREVLVDMAEKGVPVTERVFGEGRYLRPNFIEFFECNTVLIKDI 239
Query: 192 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 251
N+PFW +HP+ +N++I VT+ + PN DG DP+ S N+ I++ +TGDD +A
Sbjct: 240 KIINAPFWILHPMKSNNIIIDGVTV--NSHGPNNDGCDPEYSQNIIIKNCVFNTGDDCIA 297
Query: 252 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEH--INLYNVGV 309
+KSG D G PS I ++ G+ +GSE S GV NV E+ ++ N+
Sbjct: 298 IKSGRDADGRRVAIPSKNIIVQNCKMIDGHGGVVIGSEISAGVNNVFVENCIMDSPNLDR 357
Query: 310 GIHVKTNIGRGGFIRNITVSDVYMENARK---GIKIAGDVGDHPDDKFNPNALPVVNGIT 366
I +KTN RGG I ++ V ++ + ++ + + +V F +PV+ I+
Sbjct: 358 AIRIKTNSKRGGVIEDVYVRNLEVGTVKECVLKLNMFYNVYGSQTGSF----IPVIRNIS 413
Query: 367 IKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINLQ 400
+++V K + G+ +G K SP + L N+ ++
Sbjct: 414 LENVTVKKAGKYGVWAEGYKESPVENVTLKNVVIE 448
>gi|423232721|ref|ZP_17219121.1| hypothetical protein HMPREF1063_04941 [Bacteroides dorei
CL02T00C15]
gi|423247413|ref|ZP_17228463.1| hypothetical protein HMPREF1064_04669 [Bacteroides dorei
CL02T12C06]
gi|392623160|gb|EIY17265.1| hypothetical protein HMPREF1063_04941 [Bacteroides dorei
CL02T00C15]
gi|392632553|gb|EIY26512.1| hypothetical protein HMPREF1064_04669 [Bacteroides dorei
CL02T12C06]
Length = 955
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/308 (35%), Positives = 162/308 (52%), Gaps = 33/308 (10%)
Query: 59 REAIYR-IQHLRRSGGTLLYVPPGVY-LTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLI 116
R+ I R I +GG + + G+Y L G+ L S + L+L K A + + + +
Sbjct: 555 RQLIQRAIDSCSLAGGGHVIISKGIYYLKGNLVLKSDVNLHLEKDAYLLFSGKADD--FL 612
Query: 117 APLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQ--------- 167
+ + G E G M I+ ++ ITG+ GTID QG + W Q
Sbjct: 613 PEVWTRWEGTELYGHSPM--IYAKHATNIAITGQ-GTIDAQGGREFASWSQIEVSDRNRL 669
Query: 168 -----RTLPFT----------RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIR 212
+ +P T RP+ I+FM I++ + +NSPFW IHPVYC NV++R
Sbjct: 670 RKMGEKLIPVTERIFGKGTILRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVR 729
Query: 213 YVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITI 272
+TI + PN DG DP+S+SNV IE+ TGDD +A+K+G D G G PS I I
Sbjct: 730 SITI--DSHYPNNDGCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVI 787
Query: 273 RRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVY 332
R S +G+ +GSE SGGVEN+ ++I + V ++ K+N RGG+IRNI VS++
Sbjct: 788 RNCLFQSECNGLCIGSEMSGGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNIT 847
Query: 333 MENARKGI 340
+E ++ +
Sbjct: 848 IERSKGAV 855
>gi|265755035|ref|ZP_06089949.1| beta-xylosidase [Bacteroides sp. 3_1_33FAA]
gi|263234646|gb|EEZ20225.1| beta-xylosidase [Bacteroides sp. 3_1_33FAA]
Length = 955
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/308 (35%), Positives = 162/308 (52%), Gaps = 33/308 (10%)
Query: 59 REAIYR-IQHLRRSGGTLLYVPPGVY-LTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLI 116
R+ I R I +GG + + G+Y L G+ L S + L+L K A + + + +
Sbjct: 555 RQLIQRAIDSCSLAGGGHVIISKGIYYLKGNLVLKSDVNLHLEKDAYLLFSGKADD--FL 612
Query: 117 APLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQ--------- 167
+ + G E G M I+ ++ ITG+ GTID QG + W Q
Sbjct: 613 PEVWTRWEGTELYGHSPM--IYAKHATNIAITGQ-GTIDAQGGREFASWSQIEVSDRNRL 669
Query: 168 -----RTLPFT----------RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIR 212
+ +P T RP+ I+FM I++ + +NSPFW IHPVYC NV++R
Sbjct: 670 RKMGEKLIPVTERIFGKGTILRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVR 729
Query: 213 YVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITI 272
+TI + PN DG DP+S+SNV IE+ TGDD +A+K+G D G G PS I I
Sbjct: 730 SITI--DSHYPNNDGCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVI 787
Query: 273 RRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVY 332
R S +G+ +GSE SGGVEN+ ++I + V ++ K+N RGG+IRNI VS++
Sbjct: 788 RNCLFQSECNGLCIGSEMSGGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNIT 847
Query: 333 MENARKGI 340
+E ++ +
Sbjct: 848 IERSKGAV 855
>gi|345513230|ref|ZP_08792752.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|345456240|gb|EEO47229.2| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
Length = 955
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/308 (35%), Positives = 162/308 (52%), Gaps = 33/308 (10%)
Query: 59 REAIYR-IQHLRRSGGTLLYVPPGVY-LTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLI 116
R+ I R I +GG + + G+Y L G+ L S + L+L K A + + + +
Sbjct: 555 RQLIQRAIDSCSLAGGGHVIISKGIYYLKGNLVLKSDVNLHLEKDAYLLFSGKADD--FL 612
Query: 117 APLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQ--------- 167
+ + G E G M I+ ++ ITG+ GTID QG + W Q
Sbjct: 613 PEVWTRWEGTELYGHSPM--IYAKHATNIAITGQ-GTIDAQGGREFASWSQIEVSDRNRL 669
Query: 168 -----RTLPFT----------RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIR 212
+ +P T RP+ I+FM I++ + +NSPFW IHPVYC NV++R
Sbjct: 670 RKMGEKLIPVTERIFGKGTILRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVR 729
Query: 213 YVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITI 272
+TI + PN DG DP+S+SNV IE+ TGDD +A+K+G D G G PS I I
Sbjct: 730 SITI--DSHYPNNDGCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVI 787
Query: 273 RRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVY 332
R S +G+ +GSE SGGVEN+ ++I + V ++ K+N RGG+IRNI VS++
Sbjct: 788 RNCLFQSECNGLCIGSEMSGGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNIT 847
Query: 333 MENARKGI 340
+E ++ +
Sbjct: 848 IERSKGAV 855
>gi|212693830|ref|ZP_03301958.1| hypothetical protein BACDOR_03351 [Bacteroides dorei DSM 17855]
gi|212663719|gb|EEB24293.1| glycosyl hydrolase, family 43 [Bacteroides dorei DSM 17855]
Length = 957
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/308 (35%), Positives = 162/308 (52%), Gaps = 33/308 (10%)
Query: 59 REAIYR-IQHLRRSGGTLLYVPPGVY-LTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLI 116
R+ I R I +GG + + G+Y L G+ L S + L+L K A + + + +
Sbjct: 557 RQLIQRAIDSCSLAGGGHVIISKGIYYLKGNLVLKSDVNLHLEKDAYLLFSGKADD--FL 614
Query: 117 APLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQ--------- 167
+ + G E G M I+ ++ ITG+ GTID QG + W Q
Sbjct: 615 PEVWTRWEGTELYGHSPM--IYAKHATNIAITGQ-GTIDAQGGREFASWSQIEVSDRNRL 671
Query: 168 -----RTLPFT----------RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIR 212
+ +P T RP+ I+FM I++ + +NSPFW IHPVYC NV++R
Sbjct: 672 RKMGEKLIPVTERIFGKGTILRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVR 731
Query: 213 YVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITI 272
+TI + PN DG DP+S+SNV IE+ TGDD +A+K+G D G G PS I I
Sbjct: 732 SITI--DSHYPNNDGCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVI 789
Query: 273 RRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVY 332
R S +G+ +GSE SGGVEN+ ++I + V ++ K+N RGG+IRNI VS++
Sbjct: 790 RNCLFQSECNGLCIGSEMSGGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNIT 849
Query: 333 MENARKGI 340
+E ++ +
Sbjct: 850 IERSKGAV 857
>gi|219814394|gb|ACL36472.1| pectinase [uncultured bacterium]
Length = 436
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 127/404 (31%), Positives = 196/404 (48%), Gaps = 52/404 (12%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
+T FG G GK T A ++AI ++GG + VP GV+L+G+ L S++ L+LA
Sbjct: 25 DVTAFGADGSGKKDATGAIQKAI---DQAHKAGGGRVAVPEGVFLSGALRLKSNVELHLA 81
Query: 100 KGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG- 158
+GAVIK +Q+ ++ L L + G E Y I+ +++ ITG+ GT+DGQG
Sbjct: 82 QGAVIKFSQNPEDY-LPVVLTRF-EGVELY--NYSPLIYAYEAENIAITGK-GTLDGQGD 136
Query: 159 -AIWWNMWR-------------------QRTLPFT----------RPNLIEFMNSRSIII 188
WW R +R +P T RPN I+ + I+I
Sbjct: 137 DEHWWPWKRGTNGQSSQEKDRNALFEMAERGVPVTERQFGKGHYLRPNFIQPYRCKDILI 196
Query: 189 SNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDD 248
V NSP W +HPV C NV + + ++ PNTDG++P+S NV I+ + +GDD
Sbjct: 197 QGVPVLNSPMWQVHPVLCENVTVDGIKVIG--HGPNTDGVNPESCKNVVIKGCHFDSGDD 254
Query: 249 LVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEH--INLYN 306
+AVKSG + PS I I G+ +GSE SGGV+NV+AE ++ N
Sbjct: 255 CIAVKSGRNADARRINMPSENIVIEHNEMKDGHGGVTIGSEISGGVKNVIAEGNLMDSPN 314
Query: 307 VGVGIHVKTNIGRGGFIRNITVSDVYMENARK---GIKIAGDVGDHPDDKFNPNALPVVN 363
+ + +KTN RGG + NI +++ ++ I + + GD D K PVV
Sbjct: 315 LDRALRIKTNSVRGGVLENIYFHKNTVKSLKREVIAIDMEYEEGDAGDFK------PVVR 368
Query: 364 GITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTS 407
I ++ + Q + +SP TG+ +++ + GV P
Sbjct: 369 NIDVEQLKSMGGQYGIRVLAYDHSPVTGLKVTDSEIDGVDIPME 412
>gi|322437527|ref|YP_004219617.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321165420|gb|ADW71123.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 467
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 129/408 (31%), Positives = 202/408 (49%), Gaps = 37/408 (9%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
++++ DFG +GDG TL T++ + I R L GG + +P G YLTGS +L + +TL
Sbjct: 49 QLNVRDFGAIGDGITLETESLQRTIDRCGVL---GGGEVIIPAGRYLTGSVSLRTKVTLR 105
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
LA VI + D ++ A G+ PG Y+ IH + + + G G+I+G
Sbjct: 106 LAAECVILGSPDLAHY---AVSQVRWEGKWIPG--YLGLIHALDARKIAVLGP-GSIEGN 159
Query: 158 GAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL 217
A+ ++ P RP LIEF+ + + + W+IHP C N+V R +T+
Sbjct: 160 VAVAGRPTKEN--PLRRPALIEFLYCDDVHLEGFSTSYAHMWSIHPTCCDNLVFRNLTVR 217
Query: 218 APADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVT- 276
+ N DGID DS +V I+ I++GDD +++KSG E P+ + I T
Sbjct: 218 STLT--NGDGIDIDSCRHVLIDTCDIASGDDCISLKSGRGEEAYQLARPTEDVRIVNCTL 275
Query: 277 GSSPFSGIAVGSETSGGVENVLAEHINLYNV-GVGIHVKTNIGRGGFIRNITVSDVYMEN 335
F+ I +GSETS G+ VL E + +V +++K+ +GRG FI ++TV D+
Sbjct: 276 EGRGFACIGIGSETSAGIRRVLIEGCRVTSVYKFAVYIKSRVGRGAFIEDLTVRDMSAAK 335
Query: 336 ARKG-IKIAGDVGDHPDDKFNP--NALPVVNGIT-----IKD----VWGTKVQQSGLIQG 383
R G +KI+ D+ P + LP+ I+ + D V ++ L+ G
Sbjct: 336 MRMGFLKISQTSAGVQDENPVPGLDGLPLFRNISFLRIHVDDAPVLVEAKEISADKLLDG 395
Query: 384 LKNSPFTGIC-----LSNI---NLQGVA--GPTSPPLKCSDVSGSAYQ 421
L FTG C L+NI L+G+A G T P L+ +V+G Q
Sbjct: 396 LTLDGFTGTCAKGLELANITHATLRGIAVSGFTGPLLRIDNVTGKGLQ 443
>gi|431798726|ref|YP_007225630.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789491|gb|AGA79620.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 475
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 125/417 (29%), Positives = 199/417 (47%), Gaps = 70/417 (16%)
Query: 33 RYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTS 92
+ + + SI ++G G+ L+T A AI + +GG + VP GVYLTG+ +L S
Sbjct: 53 EFPDQEFSIEEYGAEAGGEVLSTDAIAAAI---KACNEAGGGRVVVPKGVYLTGAVHLLS 109
Query: 93 HMTLYLAKGAVIKATQDTWNW-PLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGEN 151
++ L+L +GA ++ +++ ++ PL+ S G E Y FI+ +++ ITG N
Sbjct: 110 NVNLHLEEGATLRFSRNPKDYLPLVR---SRWEGMELMN--YSPFIYAYQQENIAITG-N 163
Query: 152 GTIDGQGAI--WW------------NMWRQ---RTL-------------------PFTRP 175
GT+DG + WW M RQ R L F RP
Sbjct: 164 GTLDGHADMEHWWPWCGAKHFGWKEGMGRQNPSRKLLHEMVHDRVPLEERIFGEGHFMRP 223
Query: 176 NLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSN 235
++ ++++I +V N+P WN+HPV C NV + V I PN DG DP++ N
Sbjct: 224 QFVQPFECKNVLIQDVKLINAPMWNLHPVLCENVTVERVKI--ETLGPNNDGCDPEACKN 281
Query: 236 VCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVE 295
V I+D Y TGDD +A+KSG +E G G PS I I G+ +GSE SGG
Sbjct: 282 VLIKDCYFDTGDDCIAIKSGRNEDGRIPGIPSENIIIEGCEMKEGHGGVVIGSEISGGAR 341
Query: 296 NVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDV----YMENARKGIKIAGDVGDH 349
NV A+++ + N+ + +KT+ RGG + NI + DV Y E A + + GDH
Sbjct: 342 NVFAQNLVMDSPNLDRVLRIKTSSKRGGTVENIYMRDVVVGTYREAAVRFNMFYEEEGDH 401
Query: 350 PDDKFNPNALPVVNGITIKDVWGTKVQQSG----LIQGLKNSPFTGICLSNINLQGV 402
+P + + ++++ +V+ G + ++SP T + N + V
Sbjct: 402 ---------IPTIRNVIVENL---QVKNGGKYAVMANAYESSPVTNFQMINCRIDSV 446
>gi|374311245|ref|YP_005057675.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358753255|gb|AEU36645.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 467
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/372 (31%), Positives = 191/372 (51%), Gaps = 22/372 (5%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
++++ DFG GDG TL T + ++A+ R L GG + +P G YLTG +L S +TL
Sbjct: 49 QLNVRDFGATGDGSTLETASLQQALDRCNVL---GGGEVLIPAGRYLTGGLSLRSRVTLR 105
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
L K A + + D ++P+ G+ PG Y + +H +++ I GE G I+G
Sbjct: 106 LDKDATLLGSPDLAHYPVAQ---VRWEGKWIPG--YTALLHALDARNIAIVGE-GKIEGN 159
Query: 158 GAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL 217
A+ + P RP L+EF+N + + + + W+IHP C N+V R +TI
Sbjct: 160 EAVAGRPTKDN--PLRRPALLEFINCDGVHLEGISTSYAHMWSIHPTCCDNLVFRNLTI- 216
Query: 218 APADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVT- 276
+ N DGID DS +V I+ I++GDD +++KSG E P+ + I T
Sbjct: 217 -RSTKTNGDGIDIDSCRHVLIDSCDIASGDDCISLKSGRGEEAYTMNRPTEDVRITNCTL 275
Query: 277 GSSPFSGIAVGSETSGGVENVLAEHINLYNV-GVGIHVKTNIGRGGFIRNITVSDVYMEN 335
F+ + +G+E+S G+ NV+ EH ++ +V I++K+ IGRG FI N+TV D+
Sbjct: 276 EGRGFACLGIGTESSAGIRNVIIEHCHITSVYKYAIYIKSRIGRGAFIENLTVRDMDAAR 335
Query: 336 ARKG-IKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGI 392
R G ++I D P LP+ +++ +VQ + ++ N+ +G
Sbjct: 336 MRMGFLRIDQTNAGIQDADPVPGLEGLPLFRNFRFENI---RVQDAPVLVEAINTD-SGK 391
Query: 393 CLSNINLQGVAG 404
L + LQG++G
Sbjct: 392 MLDGLVLQGISG 403
>gi|288541509|gb|ADC45581.1| glycoside hydrolase [Streptomyces nanchangensis]
Length = 433
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 130/428 (30%), Positives = 201/428 (46%), Gaps = 75/428 (17%)
Query: 29 IVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSF 88
I P + +IT +G VGDG+ +NT+AFR AI R+GG + VP G +LTG+
Sbjct: 8 IRPPAFPRRTFTITHYGAVGDGQKMNTEAFRAAIAACH---RAGGGHVLVPEGRFLTGAI 64
Query: 89 NLTSHMTLYLAKGAVIKATQDTWNW-PLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVI 147
+L S + L++ +GA I + D ++ P++ + R Y FI+ G ++V +
Sbjct: 65 HLRSGVDLHVTEGATIAFSPDPRDFLPVV-----FTRWEGTECYNYSPFIYAYGERNVAV 119
Query: 148 TGENGTIDGQGAIW-WNMWRQRTLP---------------------------FTRPNLIE 179
TG GT+DGQ + W W + + P + RP +++
Sbjct: 120 TGP-GTLDGQARLGPWESWYRSSGPQGPDQSLLRRMGSAGVPVAERVFGDGHYLRPKMVQ 178
Query: 180 FMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP--NTDGIDPDSSSNVC 237
F R++++S + + P W +HPV +NV +R +T+ DS NTDG DP+ S+V
Sbjct: 179 FYRCRNVLVSGLTIVDPPMWTVHPVLSTNVTVRDITV----DSTLYNTDGCDPECCSDVL 234
Query: 238 IEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENV 297
I +T DD VAVKSG DE G G PS I +R S + G+ VGSE SGGV +V
Sbjct: 235 ITGCRFNTNDDCVAVKSGRDEDGHRVGVPSRNIVVRDCWFSGRWGGMTVGSEMSGGVRDV 294
Query: 298 LAEHINL--------YNVGVGIHVKTNIGRGGF-----IRNITVSDVYMENARKGIKIAG 344
AE+ + Y V ++VK + RGG+ IRN T V + + G
Sbjct: 295 FAENCEINSPDFPGRYPVKHALYVKASKKRGGYIDGVHIRNFTGQSVERDAVFVNMNYNG 354
Query: 345 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL-----IQGLKNSPFTGICLSNINL 399
G LPV +++++ +++ G + GL+ G+ LS
Sbjct: 355 GEG---------GTLPV----SVRNIHMDRMEIDGARAVLQLVGLETDHLRGVSLSRSTF 401
Query: 400 QGVAGPTS 407
G+ P S
Sbjct: 402 TGILSPDS 409
>gi|59044767|gb|AAW84066.1| pectate lyase [uncultured bacterium]
Length = 471
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 128/413 (30%), Positives = 197/413 (47%), Gaps = 59/413 (14%)
Query: 31 PMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNL 90
PMR +T+FG GDG+T T AFR AI R + +GG + VPPG YLTG+ +L
Sbjct: 51 PMR----TFDLTEFGAKGDGRTDCTLAFRRAIDRCTN---AGGGRVVVPPGSYLTGAIHL 103
Query: 91 TSHMTLYLAKGAVIKATQDTWNW-PLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITG 149
S++ L++++G +K +Q+ ++ P++ + R Y FI+ ++ ITG
Sbjct: 104 KSNVDLHISEGTTVKFSQNPKDYLPVV-----FSRWEGVEVFNYSPFIYAFEQTNIAITG 158
Query: 150 ENGTIDGQG--AIWW------------NMWRQRT------------LP----------FT 173
+ GT++GQ WW M QR +P +
Sbjct: 159 K-GTLNGQSDNEHWWPWNGRAAYGWKEGMSNQRPDRNALFAMAEKGVPVQERIFGEGHYL 217
Query: 174 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 233
RP I+ +++I V +NSP W IHPV C NV+++ V I + PN DG +P+S
Sbjct: 218 RPQFIQPYRCENVLIEGVTIRNSPMWEIHPVLCRNVIVQNVII--NSHGPNNDGCNPESC 275
Query: 234 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 293
++V I+D TGDD +A+KSG + G P+ I + GI VGSE SGG
Sbjct: 276 TDVLIKDCDFDTGDDCIAIKSGRNADGRRLKAPTENIIVTGCRMKDGHGGITVGSEISGG 335
Query: 294 VENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYM-ENARKGIKIAGDVGDHP 350
V N+ A + L N+ + VK N RGG + N+ ++ + + A I I + +
Sbjct: 336 VRNLFASNCRLDSPNLDHALRVKNNAMRGGLLENLHFRNIDVGQVAHAVITIDFNYEEGA 395
Query: 351 DDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 403
F PVV T+ + TK + + +QGL +P + L+N VA
Sbjct: 396 KGSFT----PVVRDYTVDGLRSTKSKYALDVQGLATAPIVNLRLTNCIFDNVA 444
>gi|409099480|ref|ZP_11219504.1| glycoside hydrolase family protein [Pedobacter agri PB92]
Length = 530
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 122/399 (30%), Positives = 184/399 (46%), Gaps = 49/399 (12%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
++T +G D L T A ++AI ++GG +Y P G YLTG+ +L S++T+++
Sbjct: 32 NVTKYGAKNDSSKLATVAIKKAI---DAASKAGGGTVYFPAGKYLTGAIHLKSNITIFID 88
Query: 100 KGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMS-FIHGDGLQDVVITGENGTIDGQG 158
GA + + + ++ LP E + S + +++ I G G IDG G
Sbjct: 89 AGAELHFSDNFDDY-----LPMVESRYEGVDVKSFSPLFYAYKAENISIIGR-GLIDGHG 142
Query: 159 AIWWNM------------W-----------------RQRTLPFTRPNLIEFMNSRSIIIS 189
WW+ W +Q F RP I+ M ++++I
Sbjct: 143 KKWWDFVEGYKEGQARSKWQYEFDKLNKDIVLPDDPKQMKRGFLRPPFIQTMFCKNVLID 202
Query: 190 NVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDL 249
+ +NSPFW ++P + NV I VTI P SPNTDGI+P+S NV I D +IS GDD
Sbjct: 203 GITIRNSPFWTVNPEFSENVKIHAVTINNP-HSPNTDGINPESCKNVHISDCHISVGDDC 261
Query: 250 VAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGV 309
+ +KSG DE G P+ I T S G+ +GSE SG V + +
Sbjct: 262 ITIKSGKDEPGRRMAIPAENYVITNCTMLSGHGGVVIGSEMSGDVRKITISNCVFDGTDR 321
Query: 310 GIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFN----PNALPVVNGI 365
GI +KT GRGG + I VS++ M K IK V D K N + P I
Sbjct: 322 GIRIKTARGRGGIVEEIRVSNIIM----KDIKQQAIVLDMQYAKTNVQPVSDRTPKFRNI 377
Query: 366 TIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 404
++ G +V Q+ + GL+ P I ++IN++ G
Sbjct: 378 HFSNITG-QVNQAAYLNGLEEMPIENITFNDINMEAKTG 415
>gi|89098529|ref|ZP_01171412.1| hypothetical protein B14911_09967 [Bacillus sp. NRRL B-14911]
gi|89086774|gb|EAR65892.1| hypothetical protein B14911_09967 [Bacillus sp. NRRL B-14911]
Length = 443
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/286 (34%), Positives = 155/286 (54%), Gaps = 17/286 (5%)
Query: 53 LNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWN 112
L T+ ++AI ++GG + +P G +LTG L ++ L+L GA +K + +
Sbjct: 16 LATEGIQKAI---DEAYQNGGGKVVIPAGEFLTGPLFLKDNIELHLENGAHLKFSDKQED 72
Query: 113 WPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQR--TL 170
+P++ S G +R Y S + +G +++ +TG GTIDG G WW+++R R L
Sbjct: 73 YPVVT---SRWEGVKRK--VYASCLFAEGARNIAVTG-FGTIDGNGMEWWDVFRNRREEL 126
Query: 171 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 230
+ RP LI F + I + +V NSP W ++P+ C ++ + V+IL PADSPNTDGIDP
Sbjct: 127 KYPRPKLISFDHCEHITLRDVRLINSPSWTVNPICCRDITVDNVSILNPADSPNTDGIDP 186
Query: 231 DSSSNVCIEDSYISTGDDLVAVKSGWD--EYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 288
+S NV I + +I GDD +A+KSG + E +A ITI T + GS
Sbjct: 187 ESCRNVRISNCHIDVGDDCIAIKSGTEDTEERVA----CENITITNCTMVHGHGAVVFGS 242
Query: 289 ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYME 334
E SG + NV + + GI K+ GRGG + ++ V ++ ME
Sbjct: 243 EMSGDIRNVTISNCVFQDTDRGIRFKSRRGRGGVVEDVRVDNIVME 288
>gi|218133835|ref|ZP_03462639.1| hypothetical protein BACPEC_01724 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991210|gb|EEC57216.1| polygalacturonase (pectinase) [[Bacteroides] pectinophilus ATCC
43243]
Length = 521
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 124/410 (30%), Positives = 197/410 (48%), Gaps = 35/410 (8%)
Query: 18 FSLASVVTCSGIVPMRYRND----KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGG 73
+++++V I P+ R D +++ DFG G+G+ +T A + AI R
Sbjct: 61 YTISAVYDGKEIAPVSVRTDYEFVTLNVKDFGAYGNGEHDDTNAIQCAIMSCPKAGR--- 117
Query: 74 TLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLI-APLPSYGRGRE----- 127
+ VP G Y S L S +TL LAKGAV+ A + +P++ + SY E
Sbjct: 118 --ILVPAGEYKISSIFLKSDITLDLAKGAVLSAFTEREKFPILPGVIESYDETDEYNLGS 175
Query: 128 ---RPGGRYMSFIHGDGLQDVVITGENGTIDGQGAI--WWNMWRQRTLPFTRPNLIEFMN 182
P + + + G +++VVITGE GTIDG WW + R + + RP L +
Sbjct: 176 WEGNPLDCFSAIVCGINVENVVITGE-GTIDGNAGFDNWWYNVKVRNIAW-RPRLFFINH 233
Query: 183 SRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSY 242
R++ + + QNSP W +HP + ++ V I PA+S NTDG+DP+S ++V + +Y
Sbjct: 234 CRNVTMHGITVQNSPSWTLHPYFSDHLKFIDVKIKNPANSHNTDGLDPESCTDVRVLGTY 293
Query: 243 ISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHI 302
IS GDD +A+KSG G + P+S + +R+ + VGSE + GV++V
Sbjct: 294 ISVGDDCIAIKSGKIYMGRKHKIPTSDMEVRQCCMRDGHGAVTVGSEIAAGVKDVHIRDC 353
Query: 303 NLYNVGVGIHVKTNIGRG--GFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFN----P 356
N G+ VKT GRG + +I+ ++ M+N + PD K
Sbjct: 354 IFMNTDRGLRVKTRRGRGRDSVLDDISFENITMDNVMTPFVVNSFYFCDPDGKTEYVATS 413
Query: 357 NALPV------VNGITIKDVWGTKVQQSG-LIQGLKNSPFTGICLSNINL 399
ALPV + +T KD+ T +G I GL S + N+++
Sbjct: 414 KALPVDDRTPAIKRLTFKDIKATNCHVAGAYICGLPESKIERLTFENVDI 463
>gi|325972835|ref|YP_004249026.1| polygalacturonase [Sphaerochaeta globus str. Buddy]
gi|324028073|gb|ADY14832.1| Polygalacturonase [Sphaerochaeta globus str. Buddy]
Length = 453
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 122/400 (30%), Positives = 187/400 (46%), Gaps = 55/400 (13%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSH-MTLYL 98
++ FG VG+G+ ++AF +A+ + S G +L++ G YLTG ++ + + L L
Sbjct: 5 TLKSFGAVGNGQQNESEAFAKALAAL-----SDGGVLHIEEGTYLTGPLHIQAKGLVLEL 59
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIH-GDGLQDVVITGENGTIDGQ 157
+GAVI+ D L P+ S G I DGL ++ GE G IDG
Sbjct: 60 DRGAVIQFIADE---NLYTPVYSRWEGVNCYCMHPCLLIENSDGL---IVRGE-GIIDGN 112
Query: 158 GAIWWN-MWRQRTLP-------------------------------FTRPNLIEFMNSRS 185
G WW+ ++RT F RP L++ +NS +
Sbjct: 113 GQWWWDTAHKKRTTQKGPVSAMENELSRLNPGYERQSGGGGGRQSQFLRPPLVQILNSNN 172
Query: 186 IIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYIST 245
+ + + QNSPFW +HP+Y +N++ + +L P D+PNTDGID DS V I+ +
Sbjct: 173 VKLEGLTLQNSPFWTLHPLYSTNLIFMDLKVLNPKDAPNTDGIDVDSCRFVTIKKCLVDV 232
Query: 246 GDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLY 305
GDD +A+KSG G+A P++ I I T S G +GSET+ G+ +V
Sbjct: 233 GDDGIALKSGSGPDGVATNKPTTDILIEECTVKSAHGGAVIGSETAAGIRDVRVHDCLFD 292
Query: 306 NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-------AGDVGDHPDDKFN-PN 357
GI +KT GRGG I N+ S V M+N + + + D D +K + +
Sbjct: 293 GTDRGIRIKTRRGRGGAISNLHFSSVRMKNNLCPLTLNMYYRCGSLDPQDFSLEKLSITD 352
Query: 358 ALPVVNGITIKDVWGTKVQQS-GLIQGLKNSPFTGICLSN 396
P + G+TI+D + S I GL SP + + N
Sbjct: 353 TTPSIEGVTIEDCYSEDFTSSAAFIVGLPESPIRDLVIRN 392
>gi|317474867|ref|ZP_07934137.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
gi|316909005|gb|EFV30689.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
Length = 445
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 192/432 (44%), Gaps = 63/432 (14%)
Query: 6 VTLSILLSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRI 65
+T+++L+++F V ++ +++ + + G NT+ I R
Sbjct: 4 ITITVLMAFF--------------VALQVFAERVDMREAGVDNQEALKNTEIINNTINR- 48
Query: 66 QHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRG 125
L ++GG L+ P G YLT S ++ S++TL L GA ++ + + ++ + G
Sbjct: 49 --LNKAGGGTLFFPSGDYLTASIHMKSNITLELEAGATLRFSDNFDDYMPFVEMRHEGVM 106
Query: 126 RERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWN---------------------- 163
+ + I+ +++ I GE G +DGQG WW
Sbjct: 107 MKS----FQPLIYATDAENITIKGE-GKLDGQGKAWWKEFFRVLIDLRDNGKRDINKYQP 161
Query: 164 MWRQ----RTL--------------PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVY 205
++ Q +TL F RP I+ + R++ I + NSPFW ++P +
Sbjct: 162 LFEQANDMKTLYAETNVDWHSTLDRRFLRPPFIQLLRCRNVRIEGITIVNSPFWTVNPNF 221
Query: 206 CSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH 265
C NV ++ VTI SPNTDGI+P+S SNV I D +IS GDD + +KSG D G
Sbjct: 222 CDNVTVKGVTI-NNVPSPNTDGINPESCSNVHISDCHISVGDDCITIKSGRDLQARKIGR 280
Query: 266 PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRN 325
P ITI T S G+ +GSE SGGV+ V + GI +K+ GRGG + +
Sbjct: 281 PCENITITNCTMLSGHGGVVIGSEMSGGVKKVTISNCVFDGTDRGIRIKSTRGRGGVVED 340
Query: 326 ITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLK 385
I VS+V M + ++ + + PV I + + Q + GL
Sbjct: 341 IRVSNVVMSDIKREAVVLNLKYSQMKMEKKSERTPVFRNIFVTGLTVRGTQTPLKVDGLP 400
Query: 386 NSPFTGICLSNI 397
+P GI +I
Sbjct: 401 EAPIEGIVFRDI 412
>gi|269119326|ref|YP_003307503.1| glycoside hydrolase family protein [Sebaldella termitidis ATCC
33386]
gi|268613204|gb|ACZ07572.1| glycoside hydrolase family 28 [Sebaldella termitidis ATCC 33386]
Length = 509
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 124/390 (31%), Positives = 185/390 (47%), Gaps = 33/390 (8%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+ I +FG VGDGKT+NT A + AI L +++ + G YLTG L S++T+ +
Sbjct: 82 LDIREFGAVGDGKTVNTFAIQTAI-----LSAPENSIIEIRDGNYLTGPVLLKSNITINI 136
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRER----------PGGRYMSFIHGDGLQDVVIT 148
A A + A ++ +P+ LP+ +R P + S G + +V IT
Sbjct: 137 AGNARLTALKEREMYPI---LPASINKADRTFYLGSWEGEPAACFASLFTGVSVNNVNIT 193
Query: 149 GENGTIDGQG--AIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYC 206
GE GTIDG WW + + + + RP I + +I I + +NSP W +HPV+
Sbjct: 194 GE-GTIDGNSDRETWWKDAKIKRISW-RPRTIFLTDCSNINIVGINIENSPSWTLHPVFS 251
Query: 207 SNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHP 266
SN+ + I P DSPNTDGIDP+S NV I S GDD +A+KSG + G G P
Sbjct: 252 SNLGFFDMKIRNPKDSPNTDGIDPESCKNVSIIGVKFSVGDDCIAIKSGKGKIGREIGIP 311
Query: 267 SSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNI 326
S I I G+ +GSE SGG++NV ++ N G+ +KT GRGG I I
Sbjct: 312 SENINIENCHMEFGHGGVVIGSEMSGGIKNVNIKNCLFENTDRGLRIKTRRGRGGIIDGI 371
Query: 327 TVSDVYMENARKGIKIAG----DVGDHPDDKFNPNAL------PVVNGITIKDVWGTKVQ 376
++ M+ I D + +N + L PV+ IT K++ +
Sbjct: 372 HAENIVMDKVLTPFVINEFYYCDSDGKTEYVWNKDKLEITEETPVIKNITFKNMVCKNSE 431
Query: 377 Q-SGLIQGLKNSPFTGICLSNINLQGVAGP 405
+G + GL + L N+ + P
Sbjct: 432 VCAGFMYGLPERKIERVVLENLTIDFAEDP 461
>gi|421078108|ref|ZP_15539067.1| glycoside hydrolase family 28 [Pelosinus fermentans JBW45]
gi|392523693|gb|EIW46860.1| glycoside hydrolase family 28 [Pelosinus fermentans JBW45]
Length = 453
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 125/423 (29%), Positives = 194/423 (45%), Gaps = 67/423 (15%)
Query: 29 IVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSF 88
I+P + +TDFG VGDG T AFR + +GG + VP G+YLTG
Sbjct: 28 IIPPTFPRRDFVVTDFGAVGDGIMDCTDAFRRVM---MAANTAGGGRVVVPAGIYLTGPI 84
Query: 89 NLTSHMTLYLAKGAVIKATQDTWNW-PLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVI 147
+ S++ LY++K A +K +QD + P++ R Y I+ G ++ I
Sbjct: 85 HFKSNVNLYVSKEATVKFSQDLEKYLPMVL-----NRFEGVELYNYSPLIYSYGAVNIAI 139
Query: 148 TGENGTIDGQG--AIWWNMWR-------------------------QRTLP--------- 171
TGE G +DG G WW W+ ++ +P
Sbjct: 140 TGE-GILDGNGDNEHWW-PWKGLTQYGWQEGQAHQAEDRDVLFAMAEQNVPVEERKFGSG 197
Query: 172 -FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 230
+ RP+ I+F NS++I+I + ++SP W I PV C N+ I V I+ PNTDG +P
Sbjct: 198 HYLRPSFIQFYNSKNILIEGITVKDSPMWQISPVLCENITIDKVKIVGHG--PNTDGFNP 255
Query: 231 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 290
DS N+ I++ Y + GDD +A+KSG + G P I I+ GI +GSE
Sbjct: 256 DSCKNILIKNCYFNNGDDCIAIKSGRNGDGRRINIPCENIVIQNNYMKDGHGGITIGSEI 315
Query: 291 SGGVENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA----- 343
SG V NV A+H ++ N+ + KTN RGG I NI + +++ + I I
Sbjct: 316 SGSVRNVFADHNVMDSPNLDRALRFKTNSVRGGIIENIYFKNTTVKSIGEEIFIVDMDYE 375
Query: 344 -GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 402
GD G++ P+V I ++++ + L+ +P + + +N L V
Sbjct: 376 EGDAGEY---------TPIVRNIFVENLESYGGKTGILMSAYDRTPISNVQFTNCILHNV 426
Query: 403 AGP 405
P
Sbjct: 427 ETP 429
>gi|167521696|ref|XP_001745186.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776144|gb|EDQ89764.1| predicted protein [Monosiga brevicollis MX1]
Length = 945
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 129/437 (29%), Positives = 202/437 (46%), Gaps = 65/437 (14%)
Query: 41 ITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLY-VPPGVYLTGSFNLTSHMTLYLA 99
++D+G D K+++T A + AI G LL + G+YLTGS L S++ +
Sbjct: 523 VSDYGARDDNKSISTHAIQTAIEACSRCPEGGHVLLRPLDKGIYLTGSLFLKSNIIFEVT 582
Query: 100 KGAVI--KATQDTWNWPLI----APLPSYGRGRERPGGRYMSFIHGDGLQD--------- 144
G + A + T +WP I A + R G ++F + D
Sbjct: 583 AGVRLLGTANKSTVHWPQIYRRNAGVLELSRAALLNAGTCLTFHSTNQTGDQCAEWSRYS 642
Query: 145 -VVITGENGTIDGQGAIWWNMWRQRTLPFT-RPNLIEFMNSRSIIISNVIFQNSPFWNIH 202
+ ITG GTIDG G W + FT RP LI M + +S++ + FW +
Sbjct: 643 NITITGA-GTIDGNGFSGWYLPPYLNGSFTNRPMLIAPMWVDGLYLSDLTLTDPAFWTVA 701
Query: 203 PVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA 262
P +C NV I + I+ PNTDG+DPDS NV +E YISTGDD +A+KSG +A
Sbjct: 702 PAFCKNVHIHDLRIIT--SGPNTDGVDPDSCQNVLVERCYISTGDDCIAIKSGRGPQALA 759
Query: 263 YGHPSSGITIRRV------------------------TGSSPFSGIAVGSETSGGVENVL 298
P++ +TIR V T + GI++GSE SGG+ +VL
Sbjct: 760 INMPTANVTIRHVPQRVGRDYDATAIGSYALCRGQIRTDCTTGHGISIGSEMSGGIYDVL 819
Query: 299 AEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGD------VGDHPDD 352
+++ L G+ VKT +GRGG +RN+T ++ +++ + I D VGD
Sbjct: 820 FDNLTLSGTTNGVRVKTCMGRGGSVRNVTYRNMVIDSVDTAVLINQDYNSVTCVGD---- 875
Query: 353 KFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKC 412
ALP + I +++V V+ + ++ L+++ G+ N+ + + KC
Sbjct: 876 -----ALPNFSDILVQNVIANNVKMAFELECLQDNSCAGLRFENVTVTAFQNAS----KC 926
Query: 413 SDVSGS-AYQVKPWPCS 428
+ V V P PC+
Sbjct: 927 AHVQPEIGPNVSPVPCT 943
>gi|448419310|ref|ZP_21580352.1| exo-poly-alpha-D-galacturonosidase precursor [Halosarcina pallida
JCM 14848]
gi|445675300|gb|ELZ27833.1| exo-poly-alpha-D-galacturonosidase precursor [Halosarcina pallida
JCM 14848]
Length = 541
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 111/399 (27%), Positives = 180/399 (45%), Gaps = 45/399 (11%)
Query: 46 GVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIK 105
G+ D +L+T+A + A+ G +Y+P G YL+ + TL +A GA ++
Sbjct: 35 GIEDDDSLDTEAIQAALDDCA----GEGGEVYLPSGTYLSAPLRVGDDTTLRVANGAELR 90
Query: 106 ATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMW 165
D +P + S G + G + ++ ++V ITGE G +DG G+ WW++
Sbjct: 91 FVGDFREFPTVE---SRWEGWNQDG--FHPCLYVADAENVTITGE-GVVDGGGSHWWDLV 144
Query: 166 RQRTLPF------------------------TRPNLIEFMNSRSIIISNVIFQNSPFWNI 201
F RP L++ ++ +S V +NSPFWN
Sbjct: 145 ETPEAEFPDDLKERLAEIRSGHRQDDVSTFTVRPPLLQIHECENVTVSGVTLRNSPFWNT 204
Query: 202 HPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 261
H VY +V I V+I P D+PN DGID DSS V + D++I GDD + +KSG DE G
Sbjct: 205 HVVYSEDVTIHDVSIRNPPDAPNGDGIDIDSSRFVRVSDTHIDAGDDAICLKSGKDEEGR 264
Query: 262 AYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGG 321
G P+ + + T G+ VGSET+G V +V + + GI +K+ GRGG
Sbjct: 265 EVGRPTENVVVTNCTVEHGHGGVVVGSETAGDVRHVTVTNCTFTDTDRGIRIKSKRGRGG 324
Query: 322 FIRNITVSDVYMENARKGIKIAG----DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQ 377
+ ++ + M + G D+ P K A P V + + +V+
Sbjct: 325 TVEDLRFDTIVMRRVACPFVLNGYYQTDIDSDP--KPVDEATPNVRNVNFHHITAEEVES 382
Query: 378 SGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVS 416
+ + GL F GI +++++ + P +D+S
Sbjct: 383 AAFLAGLPERRFEGISFTDVDIDA-----TRPFDATDLS 416
>gi|393783422|ref|ZP_10371595.1| hypothetical protein HMPREF1071_02463 [Bacteroides salyersiae
CL02T12C01]
gi|392668855|gb|EIY62348.1| hypothetical protein HMPREF1071_02463 [Bacteroides salyersiae
CL02T12C01]
Length = 468
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 130/419 (31%), Positives = 197/419 (47%), Gaps = 56/419 (13%)
Query: 41 ITDFGGVGDGKTLNTKAFREAIYR-IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
ITDFG D +++ EAI + I +GG + VP G + TG L S++ +L
Sbjct: 50 ITDFGAKADNESV---PCHEAINQAILQCSLTGGGTVIVPKGTFYTGPITLKSNVNFHLE 106
Query: 100 KGAVIK-ATQDTWNWP-LIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
+GAV+K T + +P +I RP I+ G ++ ITG+ GTIDGQ
Sbjct: 107 EGAVLKFLTDQSLYFPGVITRWEGLDCYNARP------LIYAYGETNIAITGK-GTIDGQ 159
Query: 158 GA--IWWNM-------W-----------RQRTLPF-----------------TRPNLIEF 180
G+ WW M W R+R L + RP LI
Sbjct: 160 GSNDTWWPMCGAAKYGWKEGMVAQRNGGRERLLMYGETSTPIYKRVMTPEDGLRPQLINL 219
Query: 181 MNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIED 240
+ +I+I +V NSPFW IHP++C ++++R V I PN DG DP+S NV IE+
Sbjct: 220 YSCHTILIEDVTLLNSPFWVIHPLFCESLIVRGVNIFNRG--PNGDGCDPESCKNVLIEN 277
Query: 241 SYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAE 300
TGDD +A+KSG + G + PS I +R + G+ +GSE SGG N+ E
Sbjct: 278 CTFDTGDDCIAIKSGRNADGRKWNIPSENIIVRNCKMKNGHGGVVIGSEISGGYRNLFVE 337
Query: 301 HINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNA 358
+ + N+ I +KT+ RGG I N+ V D+ + R+ + + ++ + N N
Sbjct: 338 NCQMDSPNLDRVIRIKTSTCRGGIIENVFVRDITVGQCREAV-LRINLQYENRENCNRNF 396
Query: 359 LPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT-GICLSNINLQGVAGPTSPPLKCSDVS 416
PVV + +K+V K + LI GL + I + + + VA T+ DV+
Sbjct: 397 PPVVRNVHLKNVTCEKSRLGVLIIGLDDDQHVYNISVEDSHFNNVAKGTNDIKGAKDVT 455
>gi|325106070|ref|YP_004275724.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974918|gb|ADY53902.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 552
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 162/353 (45%), Gaps = 62/353 (17%)
Query: 34 YRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSH 93
++ D +IT++G DG +LNT A +AI + GG ++ VP G +LTG L ++
Sbjct: 41 FKKDTFNITNYGAKPDGISLNTDAINKAI---SDCSKKGGGVVLVPNGYWLTGPIKLQNN 97
Query: 94 MTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGT 153
+ L+L K A+++ +++ ++ L+ G +P R S I G + +V ITG+ G
Sbjct: 98 VNLHLKKNALLQFSKNFDDYKLVE-----GVYEGKPSARNESPIMGVNVSNVAITGQ-GI 151
Query: 154 IDGQGAIW------------WNMW-----------RQRTLP------------------- 171
IDG G W W ++R P
Sbjct: 152 IDGNGDAWRMVRTSDLTEYEWKAKIAKGEGILSEDKKRWYPSEKNKRGHDQNISFWLGPG 211
Query: 172 -----------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA 220
F RPNLI N +++++ V FQNSP WN+HP+ C N+ +R + I P
Sbjct: 212 VKLSDFEPVKDFLRPNLIVLNNCKNVLLEGVTFQNSPAWNVHPIMCENLTLRGLFIKNPD 271
Query: 221 DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP 280
+ N DG D +S NV +E GDD + +KSG DE G G + + IR T
Sbjct: 272 YAHNGDGADIESCKNVLVEHCIFDVGDDAICIKSGKDEEGRKRGIATENVIIRNNTVYKG 331
Query: 281 FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
G VGSE SGG +N+ GI KT+ GRGG + NI + D+ M
Sbjct: 332 HGGFVVGSEMSGGAKNIFVYDCTFMGTDKGIRFKTSRGRGGVVENIFIKDINM 384
>gi|159040816|ref|YP_001540068.1| glycoside hydrolase [Caldivirga maquilingensis IC-167]
gi|157919651|gb|ABW01078.1| glycoside hydrolase family 28 [Caldivirga maquilingensis IC-167]
Length = 462
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 192/437 (43%), Gaps = 74/437 (16%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
++ ++G G +T A EAI + R ++Y+PPG YL+ + L S++ L +
Sbjct: 12 NVVEYGADPKGLDDSTGAINEAITQASETR----GIVYIPPGNYLSRNIILRSNVMLLID 67
Query: 100 KGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRY---MSFIHGDGLQDVVITGENGTIDG 156
KGAV+K + D ++P+I R G + M I G +++V I GE G DG
Sbjct: 68 KGAVVKFSTDYKSYPIIET--------RREGVHHCGVMPLIFGKDVRNVRIIGE-GVFDG 118
Query: 157 QGAIWW---------NMWR----------------------------------------- 166
QG WW + WR
Sbjct: 119 QGYAWWPIRRFRVTEDYWRRLVESGGVVGDDGKTWWPTRNAMEGAEAFRKITSEGGKPST 178
Query: 167 ---QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 223
+R F RP L++ N+ ++ I V F++SP W IH +Y +V + + +AP SP
Sbjct: 179 EDCERYREFFRPQLLQLYNAENVTIEGVTFKDSPMWTIHILYSRHVTLINTSSIAPDYSP 238
Query: 224 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 283
NTDG+ DSSS+V + I GDD + +KSG DE G G PS I G
Sbjct: 239 NTDGVVVDSSSDVEVRGCMIDVGDDCLVIKSGRDEEGRRIGIPSENIHASGCLMKRGHGG 298
Query: 284 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-ARKGIKI 342
+GSE SGGV NV + G+ +KT GRGG I N+ V+++YM N + + +
Sbjct: 299 FVIGSEMSGGVRNVSIQDSVFDGTERGVRIKTTRGRGGLIENVYVNNIYMRNIIHEAVVV 358
Query: 343 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL--- 399
P + + P + G+ I++ Q+ LI GL P I + N +
Sbjct: 359 DMFYEKRPVEPVSERT-PKIRGVVIRNTSCDGADQAVLINGLPEMPIEDIIIENTRITSN 417
Query: 400 QGVAGPTSPPLKCSDVS 416
+G+ + ++ S+V
Sbjct: 418 KGIHIENASSIRLSNVK 434
>gi|423223572|ref|ZP_17210041.1| hypothetical protein HMPREF1062_02227 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638197|gb|EIY32044.1| hypothetical protein HMPREF1062_02227 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 551
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 169/350 (48%), Gaps = 63/350 (18%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
I +TDFGG GDG TLN++AF +AI Q+L GG L VP GV+LTG L +++ L+L
Sbjct: 49 ICLTDFGGSGDGVTLNSEAFEKAI---QYLASKGGGRLIVPQGVWLTGPIELENNVELHL 105
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRG-RERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
+ +++ +QD +P++ + + R +P +S + +V +TG+ G IDG
Sbjct: 106 SDNSIVVFSQDKSLYPIVETVFEGCKTFRCKP---QLSAVRK---SNVAVTGK-GIIDGA 158
Query: 158 GAIW------------WN--------------MWR-------------QRTLP------- 171
G IW WN +W Q +P
Sbjct: 159 GDIWRLGKKNEMPPMVWNECIQSGGILSEDGELWYPTESYYRGAKDAIQNIVPWAKTMED 218
Query: 172 ------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNT 225
F RP ++ F +++ ++FQNSP WN+H ++++ + + P + N
Sbjct: 219 FESVRDFLRPVMVNFRECDGVLLEGIVFQNSPCWNVHLSLSRDIIVHNIAVRCPWYAKNG 278
Query: 226 DGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIA 285
DGID +S +N+ + DS+ GDD + +KSG DE G G P+S I + G
Sbjct: 279 DGIDIESCTNLLLTDSWFDVGDDAICIKSGKDEEGRRRGIPASNIIVDNCVCYHGHGGFV 338
Query: 286 VGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 335
VGSE SGGV+N+ + VG+ K+ GRGG + NI + ++ M +
Sbjct: 339 VGSEMSGGVKNIAVSNCRFSGTDVGLRFKSKRGRGGVVENIYIKNIMMND 388
>gi|354581296|ref|ZP_09000200.1| glycoside hydrolase family 28 [Paenibacillus lactis 154]
gi|353201624|gb|EHB67077.1| glycoside hydrolase family 28 [Paenibacillus lactis 154]
Length = 522
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 122/420 (29%), Positives = 188/420 (44%), Gaps = 81/420 (19%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+ ITD+G VGDG NT AF +AI + ++GG + +PPG++ TG L S + L+
Sbjct: 20 VMITDYGAVGDGVYDNTLAFHQAI---EACAKAGGGKVVIPPGIWHTGPLTLQSRIELHA 76
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDG-- 156
+ GA++ ++ +P+ + +Y GR+ R S + G+GL+D+ TG +G DG
Sbjct: 77 SAGALVMFSKQFEAYPI--RMSAY-EGRQM--FRCQSPLDGEGLEDIAFTG-SGIFDGGG 130
Query: 157 ---------------------------QGAIWW----------NMWR------------Q 167
G +WW N+ R +
Sbjct: 131 EAWRPVKQGKLTESQWDRLIHTGGVVDDGGLWWPTPAARDGMENLARIEQTGSRNPQDYE 190
Query: 168 RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDG 227
+ RPNL+ N + I+++ FQNS W +HP + I+ +T+ P + N DG
Sbjct: 191 PVRDYLRPNLLSLRNCKRILLNGPTFQNSAAWCLHPWASEQITIQNITVRNPWYAQNGDG 250
Query: 228 IDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVG 287
+D DS V +E+S GDD + +KSG +E G G PS I+IR T GI VG
Sbjct: 251 LDIDSCKYVTVENSSFDVGDDAICLKSGKNEAGRLLGKPSERISIRNCTVYHGHGGIVVG 310
Query: 288 SETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV- 346
SE SGG+++V N +GI K+ GRGG + NI + + M +I GD
Sbjct: 311 SEMSGGIKDVHVSDCNFIGTDIGIRFKSCRGRGGVVENIFIERIRMR------EIDGDAI 364
Query: 347 ------------GDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGI 392
G++ + P PV I I+D+ + + LI GL P +
Sbjct: 365 SFNLYYEGKAGSGEYQAEAMLPVTEETPVFRNIVIQDIVCSGAHTALLINGLPEMPVENV 424
>gi|384566069|ref|ZP_10013173.1| endopolygalacturonase [Saccharomonospora glauca K62]
gi|384521923|gb|EIE99118.1| endopolygalacturonase [Saccharomonospora glauca K62]
Length = 491
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 135/425 (31%), Positives = 200/425 (47%), Gaps = 70/425 (16%)
Query: 27 SGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTG 86
I P R +++IT G G+ +T A AI R GG + VPPG Y TG
Sbjct: 50 EAITPPRIPPRRVTITAHGADPTGRRDSTDAIAAAITAAA---RKGGGKVVVPPGEYRTG 106
Query: 87 SFNLTSHMTLYLAKGAVIKATQDTWNW-PLIAPLPSYGRGRERPGGRYMSFIHGDGLQDV 145
+ +L S++ L++++GA ++ +QD ++ P++ + R Y F++ G+ DV
Sbjct: 107 AIHLRSNIELHVSRGATLRFSQDPADYLPMV-----HTRWEGIELYNYSPFVYAYGVHDV 161
Query: 146 VITGENGTIDGQG--AIWW---------------------NMWRQRTLPFT--------- 173
ITGE G +DGQ WW + ++ +P
Sbjct: 162 AITGE-GVLDGQADPEHWWPWKTEPDGHGGVVETEHRNALHAMAEQGVPVAQRRFADSKL 220
Query: 174 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 233
RPN ++F S +I++S V NSP W IHPV NV++ VT+ +P D PN+DG++P+SS
Sbjct: 221 RPNFVQFYRSSTILVSGVTLTNSPMWMIHPVLSENVLVDGVTLDSP-DGPNSDGVNPESS 279
Query: 234 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 293
NV I +S + GDD +AVKSG + G G PS I I + G+ +GSE SG
Sbjct: 280 RNVVIRNSRFNNGDDCIAVKSGRNADGRRIGVPSENIVIHDNRMFAGHGGVVIGSEMSGD 339
Query: 294 VENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN------ARKGIKI--- 342
V NV AE +N ++ + +KTN RGG TV VY + A I+I
Sbjct: 340 VRNVFAERNVMNSPHLDRALRIKTNSVRGG-----TVEGVYFRDNDVPAVADAVIRINFH 394
Query: 343 --AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 400
GDVGD P V GI I +V + + ++G + SP T I + +
Sbjct: 395 YEEGDVGDF---------TPTVRGIHIDNVHSVGGEFALYLRGYERSPITDITIRDSTFS 445
Query: 401 GVAGP 405
P
Sbjct: 446 EATTP 450
>gi|254785604|ref|YP_003073033.1| glycoside hydrolase family 28 domain-containing protein
[Teredinibacter turnerae T7901]
gi|237685733|gb|ACR12997.1| glycoside hydrolase family 28 domain protein [Teredinibacter
turnerae T7901]
Length = 467
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 125/441 (28%), Positives = 204/441 (46%), Gaps = 61/441 (13%)
Query: 3 RFLVTLSILLSYFNCFSLASV----------VTCSGIVPMRYRNDKISITDFGGVGDGKT 52
R L+ + S C +L+S+ + + P + + + I +G V DG++
Sbjct: 7 RQLLQATAAFSLPGCHNLSSLSPPVDWATAQTIDTAVQPPVFPDRQFDIQHYGAVADGQS 66
Query: 53 LNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWN 112
L+T A AI ++GG + VP G YLTG+ +L S++ L+LA+ A + ++D +
Sbjct: 67 LSTGAINSAIIACH---KAGGGRVLVPAGHYLTGAVHLLSNVELHLAENARLSFSRDPND 123
Query: 113 WPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAI--WW-----NMW 165
+ + + + G E G Y I+ +++ ITG G +DG + WW + W
Sbjct: 124 Y--LPAVFTRWEGVEYMG--YSPLIYAYQAENIGITG-TGVLDGSASEMHWWPWKGTSEW 178
Query: 166 -------------------------RQRTLP---FTRPNLIEFMNSRSIIISNVIFQNSP 197
RQR + RP I+ R++++ +V N+P
Sbjct: 179 ARPGFASQDNSRAQLFAQAEAGVPPRQRHYSDGHYLRPPFIQPYQCRNVLLEDVTIINAP 238
Query: 198 FWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWD 257
FW +HPV C NV R + + + PN+DG +P+S NV IE + TGDD +A+KSG +
Sbjct: 239 FWLVHPVLCDNVTARRLHLQSLG--PNSDGCNPESCRNVLIEHCFFDTGDDCIAIKSGRN 296
Query: 258 EYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAE--HINLYNVGVGIHVKT 315
G PS I IR + G+ +GSE SGGV NV A ++ ++ G +KT
Sbjct: 297 ADGRRLNIPSENIVIRHCEMRAGHGGVVIGSEISGGVRNVYAHDNRMSSPDLERGFRIKT 356
Query: 316 NIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKV 375
N RGG I NI + D+ + + I I + KF+ P V I + ++
Sbjct: 357 NSVRGGLIENIYLRDIQIGQVKDAIVINFHYEEGDAGKFD----PTVRNINLDNISCEHA 412
Query: 376 QQSGLIQGLKNSPFTGICLSN 396
QQ I+G +P + ++N
Sbjct: 413 QQVFQIRGFDRAPIKQLSITN 433
>gi|431798433|ref|YP_007225337.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789198|gb|AGA79327.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 477
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 126/408 (30%), Positives = 196/408 (48%), Gaps = 70/408 (17%)
Query: 41 ITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAK 100
I+DFG VGDG T ++A + AI Q +GG + VPPG Y TG L S++ L+L K
Sbjct: 60 ISDFGAVGDGSTDASQAIKSAI---QACAEAGGGKVVVPPGDYPTGPIYLESNVNLHLEK 116
Query: 101 GAVIKATQDTWNW-PLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG- 158
A + + D ++ PL+ Y R Y ++ +++ ITGE G +DGQ
Sbjct: 117 DARLMFSTDPKDYLPLV-----YTRWEGVELMNYSPLVYAFEEENIAITGE-GILDGQAN 170
Query: 159 -AIWWNMWRQRT---------------------------LP----------FTRPNLIEF 180
WW W+ +T +P + RP ++
Sbjct: 171 ETNWW-PWKGKTQYGYTEGDPQQEDADKRHALFQMAEDGVPVEERKFGEGFYLRPQFVQP 229
Query: 181 MNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIED 240
+++++ V NSP W ++PV C NV I VT+ + PN+DG DP+SS NV I+D
Sbjct: 230 YRCKNVLVEGVKIVNSPMWILNPVLCENVTIEGVTV--ESHGPNSDGCDPESSKNVLIKD 287
Query: 241 SYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAE 300
Y +TGDD +A+KSG + G PS I I+ + G+ +GSE SGGV NV AE
Sbjct: 288 CYFNTGDDCIAIKSGRNADGRRINVPSENIIIQNCKMADGHGGVVIGSEISGGVRNVFAE 347
Query: 301 --HINLYNVGVGIHVKTNIGRGG-----FIRNITVSDVYMENARKGIKIAGDVGDHPDDK 353
+N ++ + +KT+ RGG ++RNI V + + R + D G +
Sbjct: 348 NCEMNSPHLDRALRIKTSSMRGGIIEDIYLRNIDVGQIAQQVVRVNM-FYEDSGAY---- 402
Query: 354 FNPNALPVVNGITIKDVWGTKVQQSG-LIQGLKNSPFTGICLSNINLQ 400
+P V I ++++ + G L++G +NSP I L N+N++
Sbjct: 403 -----VPTVRNIHVENMTVENGGKVGVLLEGYENSPVENITLENVNIK 445
>gi|82524094|emb|CAJ19131.1| putative endopolygalacturonase [unidentified microorganism]
Length = 448
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 127/402 (31%), Positives = 176/402 (43%), Gaps = 53/402 (13%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVY-LTGSFNLTSHMTLY 97
I+I G G+G T AF++A + R GG + VP GVY + G +L S++ L
Sbjct: 35 INIQKMGAKGNGTTDCLPAFKKAF---KKAVRKGGARIVVPAGVYYIKGPLHLVSNVCLE 91
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPG------GRYMSFIHGDGLQDVVITGEN 151
+ +GA +K AP P Y + Y FI+G L DV I G+
Sbjct: 92 IQEGATLK----------FAPEPEYYLPAVKTSWEGTFLQNYSPFIYGYQLHDVSIIGK- 140
Query: 152 GTIDGQGAIWWNMWRQRTLP------------------------FTRPNLIEFMNSRSII 187
GTIDG + WR P + RP+LI+ I
Sbjct: 141 GTIDGNAMTTFATWRSLQKPAQQRSRDMNHAGTPVSERNFGEGDYLRPHLIQLYGCERIT 200
Query: 188 ISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGD 247
I +V NSPFW IH + N ++R +I A N DGIDP+ S NV IED + + GD
Sbjct: 201 IEDVFITNSPFWCIHLLQSENAILR--SIRFDAKLVNNDGIDPEMSRNVLIEDVHFNNGD 258
Query: 248 DLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYN- 306
D VA+KSG D G PS I IR + +GSE S G++NV E+ +
Sbjct: 259 DNVAIKSGRDHDGRGTACPSENIIIRNCHFKG-LHAVVLGSEMSAGIQNVYVENCDYAGY 317
Query: 307 VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGIT 366
G+++KTN RGGFIRNI+ + + I G D + IT
Sbjct: 318 CKRGLYIKTNPDRGGFIRNISFKNCEFDEVEDLFYITSMYGGEGQDN---TFFTDIENIT 374
Query: 367 IKDVWGTKVQQSGLI-QGLKNSPFTGICLSNINLQGVAGPTS 407
++++ K + GL+ QG K P I NI + V S
Sbjct: 375 VENIQCRKARAGGLVLQGTKAKPLRNIQFRNITIGEVKNAIS 416
>gi|218129085|ref|ZP_03457889.1| hypothetical protein BACEGG_00659 [Bacteroides eggerthii DSM 20697]
gi|217988720|gb|EEC55039.1| polygalacturonase (pectinase) [Bacteroides eggerthii DSM 20697]
Length = 445
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 192/432 (44%), Gaps = 63/432 (14%)
Query: 6 VTLSILLSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRI 65
+T+++L+++F V ++ +++ + + G NT+ I R
Sbjct: 4 ITITVLMAFF--------------VALQVFAERVDMREAGVDNQEALKNTEIINNTINR- 48
Query: 66 QHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRG 125
L ++GG L+ P G YLT S ++ S++TL L GA ++ + + ++ + G
Sbjct: 49 --LNKAGGGTLFFPSGDYLTASIHMKSNITLELEAGATLRFSDNFDDYMPFVEMRHEGVM 106
Query: 126 RERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWN---------------------- 163
+ + I+ +++ I GE G +DGQG WW
Sbjct: 107 MK----SFQPLIYATDAENITIKGE-GKLDGQGKAWWKEFFRVLIDLRDNGKRDINKYQP 161
Query: 164 MWRQ----RTL--------------PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVY 205
++ Q +TL F RP I+ + R++ I + NSPFW ++P +
Sbjct: 162 LFEQANDMKTLYAETNVDWHSTLDRRFLRPPFIQPLRCRNVRIEGITIVNSPFWTVNPNF 221
Query: 206 CSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH 265
C NV ++ VTI SPNTDGI+P+S SNV I D +IS GDD + +KSG D G
Sbjct: 222 CDNVTVKGVTI-NNVPSPNTDGINPESCSNVHISDCHISVGDDCITIKSGRDLQARKIGR 280
Query: 266 PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRN 325
P ITI T S G+ +GSE SGGV+ V + GI +K+ GRGG + +
Sbjct: 281 PCENITITNCTMLSGHGGVVIGSEMSGGVKKVTISNCVFDGTDRGIRIKSTRGRGGVVED 340
Query: 326 ITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLK 385
I VS+V M + ++ + + PV I + + Q + GL
Sbjct: 341 IRVSNVVMSDIKREAVVLNLKYSQMKMEKKSERTPVFRNIFVTGLTVRGTQTPLKVDGLP 400
Query: 386 NSPFTGICLSNI 397
+P GI +I
Sbjct: 401 EAPIEGIVFRDI 412
>gi|395803712|ref|ZP_10482956.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434266|gb|EJG00216.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 492
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 124/419 (29%), Positives = 205/419 (48%), Gaps = 62/419 (14%)
Query: 30 VPMRYRNDKI-SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSF 88
+P + +DK+ +I DFG V DGKTLNT AF++A IQ +GG + VP G YLTG+
Sbjct: 61 IPQVHFSDKLYNINDFGAVADGKTLNTLAFQKA---IQECAANGGGRVLVPNGKYLTGAI 117
Query: 89 NLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVIT 148
+L S++ L+L A I + + ++P++ + G E Y I+ ++ IT
Sbjct: 118 HLESNVNLHLEDHAEILFSLNPKDYPIVH---TSWEGTEVMN--YSPLIYAKNKTNIAIT 172
Query: 149 GENGTIDGQG--AIWWNMWR---------------------------QRTLP-------- 171
G+ GT++GQ WW +W ++ +P
Sbjct: 173 GK-GTLNGQADSTNWW-IWSGGKNYGWKKGIPSQNDPTNREVLVDMAEKGIPVSERVFGD 230
Query: 172 --FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 229
+ RPN IEF + ++ ++ NSPFW +HP+ +N++I VT+ + PN DG D
Sbjct: 231 GRYLRPNFIEFFECNTALVKDIKIINSPFWILHPIKTNNMIIDGVTV--NSHGPNNDGCD 288
Query: 230 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 289
P+ S N+ I + +TGDD +A+K+G D G PS I ++ G+ +GSE
Sbjct: 289 PEYSQNILIRNCTFNTGDDCIAIKAGRDGDGRRVAIPSKNIIVQNCKMIDGHGGVVIGSE 348
Query: 290 TSGGVENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVG 347
S GV NV E+ ++ N+ I +KTN RGG I NI V ++ + ++ + + ++
Sbjct: 349 ISAGVNNVFVENCVMDSPNLDRAIRIKTNSRRGGIIENIYVRNLEVGTVKECV-LKLNMF 407
Query: 348 DHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL----IQGLKNSPFTGICLSNINLQGV 402
+ N +P + +++++V V+ G +G SP I L N+ +Q V
Sbjct: 408 YNVYGSQTGNFIPTIRNVSLENV---TVKNGGKYSVWAEGYAESPVENITLKNVKIQKV 463
>gi|436837106|ref|YP_007322322.1| glycoside hydrolase family 28 [Fibrella aestuarina BUZ 2]
gi|384068519|emb|CCH01729.1| glycoside hydrolase family 28 [Fibrella aestuarina BUZ 2]
Length = 777
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 192/437 (43%), Gaps = 74/437 (16%)
Query: 34 YRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSH 93
+R D +I +G DG TLNT+A +AI R ++GG + +P G++LTG L S+
Sbjct: 265 FRKDTFNIARYGSKADGITLNTQAINQAITRCS---QAGGGTVLIPEGLWLTGPLVLRSN 321
Query: 94 MTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGEN-- 151
+ L+LA GA+++ +++ ++P++A + G++ R + I G L +V ITG
Sbjct: 322 VNLHLASGALLQFSRNRDDYPIVA---TTWEGQD--AYRCQAPIWGVDLVNVAITGSGVI 376
Query: 152 ---------------------------GTIDGQGAIWW------------NMWR------ 166
G +D + W+ ++ R
Sbjct: 377 DGGGEVWRAVKKSKQTASQWAKLVASGGVLDDKKETWYPSAGSMKGAQSPDLARIANGKT 436
Query: 167 ----QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS 222
F RPN++ + +++ V FQNSP W +HP+ C +V +R VT+ +
Sbjct: 437 PAELTEIRDFLRPNMVSLTRCQYVLLDGVTFQNSPAWTLHPLLCEHVTMRGVTVKNQWYA 496
Query: 223 PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS 282
N DG+D +S N +E+ TGDD + +KSG DE G G P+ IR
Sbjct: 497 QNGDGVDLESCRNGLLENCTFDTGDDGITIKSGRDEEGRKRGVPTENFIIRDCRVYQAHG 556
Query: 283 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN------- 335
G +GSE SGGV N+ + VG+ KT GRGG + NI V+++ M
Sbjct: 557 GFVIGSEMSGGVRNMYVSNCQFMGTDVGLRFKTARGRGGVVENIYVNNISMTQIAGEAIL 616
Query: 336 ------ARKGIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNS 387
A+ + AGD + P + P P + +V + LI+GL
Sbjct: 617 FDMYYAAKDPVPQAGDKNELPTIEGKPLNEGTPRFRSFFVHNVSCLGAETGILIRGLPEM 676
Query: 388 PFTGICLSNINLQGVAG 404
P + I + N LQ G
Sbjct: 677 PVSNILIENAVLQTRKG 693
>gi|408501393|ref|YP_006865312.1| galacturan 1,4-alpha-galacturonidase [Bifidobacterium asteroides
PRL2011]
gi|408466217|gb|AFU71746.1| galacturan 1,4-alpha-galacturonidase [Bifidobacterium asteroides
PRL2011]
Length = 437
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/396 (30%), Positives = 179/396 (45%), Gaps = 52/396 (13%)
Query: 49 DGKTLNTKAFREAIYRIQHLRR-SGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKAT 107
D T++ F I HL + G +L +P G TG L S +T+ L KGAV+K
Sbjct: 4 DTTTVSAGDFSSIQEAIDHLAKCDGARVLTIPKGTTETGPLELISDLTIILEKGAVLKFK 63
Query: 108 QDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQ 167
D L P+ + G E ++ ++ I GE G IDG GA WW + Q
Sbjct: 64 DDP---HLYKPIWTRWEGIECHA--MHPLLYAADCHNITIDGE-GIIDGNGAWWWRTFAQ 117
Query: 168 -----RTLP----------------------------FTRPNLIEFMNSRSIIISNVIFQ 194
RT P F RP LI+F ++ + + Q
Sbjct: 118 IERTDRTQPQEDYELELARLNPDYKERAGGGARPSTQFLRPPLIQFWKCTAVKLKGITVQ 177
Query: 195 NSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKS 254
NSPFW IH VYC+ V I VT+ PA++ NTD +D DSS+NV + +S GDD + +KS
Sbjct: 178 NSPFWTIHFVYCTQVTIDGVTVRNPANAINTDALDIDSSTNVAVSNSLFDVGDDAITLKS 237
Query: 255 GWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVK 314
G G+ P++ + ++ T + GIA+GSET+GG+ +V E GI +K
Sbjct: 238 GSGPDGLRVNKPTAHVNVKDCTILASHGGIAIGSETAGGINDVNVEKCTFSGTQRGIRLK 297
Query: 315 TNIGRGGFIRNITVSDVYMENARKGIKIA-----GDVGDHPDDKFNPNALPV------VN 363
+ GRGG I+ IT+ + M++ I + G + D + +A PV +
Sbjct: 298 SRRGRGGTIKGITLRHLEMDHCWCPIVLGMYFAPGVLPQEEDYVLSKSAQPVEATTPHIR 357
Query: 364 GITIKDVWGTKVQQ-SGLIQGLKNSPFTGICLSNIN 398
I I+DV V+ + I GL SP + +
Sbjct: 358 NIRIEDVRADNVRSTAAFIVGLPESPIENVSIDQFE 393
>gi|339499261|ref|YP_004697296.1| polygalacturonase [Spirochaeta caldaria DSM 7334]
gi|338833610|gb|AEJ18788.1| Polygalacturonase [Spirochaeta caldaria DSM 7334]
Length = 467
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 149/304 (49%), Gaps = 39/304 (12%)
Query: 65 IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGR 124
I+ L GG +L + GV+ +G L S++ LY+ + A + D + L P+ +
Sbjct: 28 IKKLTSVGGGILKLTSGVFFSGPLQLYSNIHLYIEENATLTFNAD---FSLYKPVWTRWE 84
Query: 125 GRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWN-MWRQ---------------- 167
G E I +++ I G +G IDG G WWN +W+
Sbjct: 85 GVE--CWAMHPLIFASKAENITIAG-SGHIDGNGEPWWNSLWQAKAEKRTHPKYPYELQL 141
Query: 168 ----------------RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVI 211
R L F RP LI+F+N ++I + NV QNSPFWN H +CS+ I
Sbjct: 142 ADLNKDYRNQPSGGGGRELQFLRPPLIQFLNCKNITLQNVTLQNSPFWNTHFAFCSDCTI 201
Query: 212 RYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGIT 271
V + P ++PNTDG++ DS S++ I++ GDD + +KSG E GI P+ I
Sbjct: 202 TGVHFINPKEAPNTDGLNIDSCSSITIQNCTFDVGDDCLGLKSGSGEDGIRINRPTENIL 261
Query: 272 IRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDV 331
I T + G+ +GSET+GG+ N+ + ++ G+ +KT GRGG I NI +
Sbjct: 262 IDSCTMKNGHGGVVIGSETAGGINNIKITNCSMEETDRGLRIKTRRGRGGVIENIRLEHC 321
Query: 332 YMEN 335
YM+N
Sbjct: 322 YMKN 325
>gi|319644236|ref|ZP_07998749.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345519913|ref|ZP_08799321.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|254836217|gb|EET16526.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|317384227|gb|EFV65199.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 468
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 185/385 (48%), Gaps = 52/385 (13%)
Query: 40 SITDFGGV--GDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+I DFG +G+ L +A AI ++GG + VPPG +LTG L S++ L+
Sbjct: 48 NIKDFGAKEGNNGEILCHEAINLAILTCS---QTGGGTVLVPPGEFLTGPITLKSNVNLH 104
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
L +GA +K + + + L P R I+ G ++ ITG+ G IDGQ
Sbjct: 105 LEEGAYLKFSSEKY---LYTP-TVLTRWEGVDCYNLHPLIYAYGESNIGITGK-GIIDGQ 159
Query: 158 GAI--WWNM-------WRQ-------------------------RTLPFT---RPNLIEF 180
+ WW+M W++ R + F RP LI
Sbjct: 160 ASNDNWWSMCGAPHYGWKEGMTAQKNGGRDKLLMYAETFAPIDKRQMTFEDGLRPQLINL 219
Query: 181 MNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIED 240
+I+I NV +NSPFW IHP++C ++ +R V + + PN+DG DP+SS NV IE+
Sbjct: 220 YRCNTILIENVTLKNSPFWVIHPLFCESLTVRGVKV--SSHGPNSDGCDPESSKNVLIEN 277
Query: 241 SYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAE 300
TGDD +A+KSG + G + PS I +R G+ VGSE SGG +N+ E
Sbjct: 278 CIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCEMKDGHGGVVVGSEISGGYKNLFVE 337
Query: 301 HINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNA 358
+ + N+ I +KTN RGG I NI V +V + R+ + + ++ +K + N
Sbjct: 338 NCKMDSPNLERVIRIKTNNCRGGVIENIYVRNVEVGECREAV-LKINLQYENREKCDRNF 396
Query: 359 LPVVNGITIKDVWGTKVQQSGLIQG 383
PVV I + +V K + LI G
Sbjct: 397 PPVVRHIYLDNVTSEKSKYGVLITG 421
>gi|116626800|ref|YP_828956.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116229962|gb|ABJ88671.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 462
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/420 (29%), Positives = 189/420 (45%), Gaps = 57/420 (13%)
Query: 29 IVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSF 88
I P + + IT FG DGKT T A R+AI R GG + G +LTG+
Sbjct: 41 IQPPKIAAKQFEITRFGARADGKTDCTDAIRKAI---DEAARVGGGRVMAREGAFLTGAI 97
Query: 89 NLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVIT 148
+L S++ L + KGA ++ + D +P++ R Y FI+ Q++ IT
Sbjct: 98 HLKSNVNLVVEKGATLRFSPDPKLYPIV-----LTRFEGLECMNYSPFIYAFNQQNIAIT 152
Query: 149 GENGTIDGQ--GAIWW-------------NMWRQRTL-------------------PFTR 174
G GT+DGQ G WW N + R + R
Sbjct: 153 G-GGTLDGQASGEHWWPWAGKRGARPDDPNQRKARAALVEMAEKGVPVADRKFGDGAWLR 211
Query: 175 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 234
P I+ ++ I +V NSP + +HPV C NV+ R V + + PN DG DP+SS
Sbjct: 212 PMFIQPYRCTNVQIEDVTITNSPMYEMHPVLCRNVIARNVKV--SSHGPNNDGCDPESSV 269
Query: 235 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 294
+V I+ TGDD +A+KSG + G PS + ++ G+ +GSE SGG+
Sbjct: 270 DVLIDGCTFDTGDDCIAIKSGRNADGRRLHSPSENLIVQNCVMKDGHGGVTMGSECSGGI 329
Query: 295 ENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG--IKIAGDVGDHP 350
NV A+ + N+ V + K N RGG I + VYM N + G + A DV +
Sbjct: 330 RNVFAQDCQMDSPNLNVALRFKNNAVRGGVIEH-----VYMRNVKAGQVAQAAIDVDFYY 384
Query: 351 DDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPL 410
++ + PVV + + ++ K ++G K++P I + N AG T PP+
Sbjct: 385 EEGEKGSFTPVVRDVEVVNLEVKKCTTPWSLRGFKSAPVRDIRIRNCTF---AGATKPPV 441
>gi|375100955|ref|ZP_09747218.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661687|gb|EHR61565.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 462
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/343 (30%), Positives = 171/343 (49%), Gaps = 41/343 (11%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLT-GSFNLTSHMTLY 97
+ +TD+G VGDG T A A+ ++ R+GG + +PPG + + G L SH+ L+
Sbjct: 54 VDVTDYGAVGDGSTDARPAIEAALADME---RAGGGRVVLPPGTWFSAGPIRLRSHVDLH 110
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
++ GA ++ ++D ++ + +PS G E G Y +H + DV +TG G IDG
Sbjct: 111 VSSGATLRFSEDPADY--LPVVPSRWEGTEMFG--YSPLLHAHRVHDVAVTG-GGLIDGN 165
Query: 158 GAIWWNMWR------QRTLP------------------FTRPNLIEFMNSRSIIISNVIF 193
+ WR Q+ L + RP++++F S +++ V
Sbjct: 166 AEDGFAAWRELQGEDQQALRRMGKEGVPVEERVFGEGHYLRPSMLQFYESSDVLVEGVTI 225
Query: 194 QNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDS-YISTGDDLVAV 252
++P W H +Y ++ +R VT+ PN DG+ DSSS+V +E++ + GDD V V
Sbjct: 226 VDAPMWVNHFIYSDDITVRDVTV--KTHRPNNDGVAIDSSSDVLVENNDFQGIGDDCVVV 283
Query: 253 KSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 312
KSG DE G G PS I +R S G A+GSE SGGV V E + +G ++
Sbjct: 284 KSGRDEDGRRVGRPSENIVVRGNRMSGTEGGFAIGSEMSGGVNTVFVERNTMDTIGSALY 343
Query: 313 VKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV-----GDHP 350
+K N+ RGG + + + D+ + A K ++ D G+HP
Sbjct: 344 IKANLDRGGVVERVRIRDITVGTAEKVLRFQTDYSGYQGGNHP 386
>gi|150004301|ref|YP_001299045.1| polygalacturonase [Bacteroides vulgatus ATCC 8482]
gi|294776888|ref|ZP_06742351.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|149932725|gb|ABR39423.1| glycoside hydrolase family 28, candidate polygalacturonase
[Bacteroides vulgatus ATCC 8482]
gi|294449364|gb|EFG17901.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 468
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 185/385 (48%), Gaps = 52/385 (13%)
Query: 40 SITDFGGV--GDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+I DFG +G+ L +A AI ++GG + VPPG +LTG L S++ L+
Sbjct: 48 NIKDFGAKEGNNGEILCHEAINLAILTCS---QTGGGTVLVPPGEFLTGPITLKSNVNLH 104
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
L +GA +K + + + L P R I+ G ++ ITG+ G IDGQ
Sbjct: 105 LEEGAYLKFSSEKY---LYTP-TVLTRWEGVDCYNLHPLIYAYGESNIGITGK-GIIDGQ 159
Query: 158 GAI--WWNM-------WRQ-------------------------RTLPFT---RPNLIEF 180
+ WW+M W++ R + F RP LI
Sbjct: 160 ASNDNWWSMCGAPHYGWKEGMTAQKNGGRDKLLMYAETFAPIDKRQMTFEDGLRPQLINL 219
Query: 181 MNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIED 240
+I+I NV +NSPFW IHP++C ++ +R V + + PN+DG DP+SS NV IE+
Sbjct: 220 YRCNTILIENVTLKNSPFWVIHPLFCESLTVRGVKV--SSHGPNSDGCDPESSKNVLIEN 277
Query: 241 SYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAE 300
TGDD +A+KSG + G + PS I +R G+ VGSE SGG +N+ E
Sbjct: 278 CIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCEMKDGHGGVVVGSEISGGYKNLFVE 337
Query: 301 HINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNA 358
+ + N+ I +KTN RGG I NI V +V + R+ + + ++ +K + N
Sbjct: 338 NCKMDSPNLERVIRIKTNNCRGGVIENIYVRNVEVGECREAV-LKINLQYENREKCDRNF 396
Query: 359 LPVVNGITIKDVWGTKVQQSGLIQG 383
PVV + + +V K + LI G
Sbjct: 397 PPVVRHVYLDNVTSEKSKYGVLITG 421
>gi|386722797|ref|YP_006189123.1| hypothetical protein B2K_11610 [Paenibacillus mucilaginosus K02]
gi|384089922|gb|AFH61358.1| hypothetical protein B2K_11610 [Paenibacillus mucilaginosus K02]
Length = 518
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 130/410 (31%), Positives = 193/410 (47%), Gaps = 41/410 (10%)
Query: 30 VPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFN 89
V R + D+ IT+FG V DG+TLNT+A + AI + G + VP G ++TG+
Sbjct: 92 VSTRGQADRFDITEFGAVADGQTLNTEAIQAAIDAC-----TAGGKVVVPKGTFVTGAIF 146
Query: 90 LTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIH----GDG-LQD 144
L S MTLY+ +G V+ + + ++P+ + GRE+ Y S I+ +G L+
Sbjct: 147 LKSRMTLYVEQGGVLLGSDNPDDYPV---MQYRWEGREQLC--YASLINTKDPAEGRLEQ 201
Query: 145 VVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPV 204
++I GE G ID G ++ F R + N + + ++ + SP W +H +
Sbjct: 202 IIIEGE-GKIDANGMALFHKEMAEKKGF-RGRAVCLRNVDGVYLKDITVRQSPAWCVHLI 259
Query: 205 YCSNVVIRYVTILAPADSP--------NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGW 256
YC+ V + ++ I D N DG++PDS+S+V I +S I++ DD +A+KSG
Sbjct: 260 YCNGVSVNHIEIHTKKDEHGRRYEHIFNGDGLNPDSTSDVYIFNSMIASQDDCIAIKSGR 319
Query: 257 DEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTN 316
+E G G PS I I T S F G+A GSE SGGV NV +V +K
Sbjct: 320 NEEGRRVGIPSQNIRISNCTFKSGF-GVATGSEMSGGVRNVRISDCRFEDVYSIATIKAP 378
Query: 317 IGRGGFIRNITVSDVYMENA----------RKGIKIAG--DVGDHPDDKFNP--NALPVV 362
GRG I N+TV D + N R I I D DK V+
Sbjct: 379 RGRGAVIENVTVEDCTLTNYSLEHEDCRWFRGAINIDQFYSHADFDADKVEEVDEGTSVI 438
Query: 363 NGITIKD-VWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLK 411
I +K+ V T + + GL SP I L N+N G G + +K
Sbjct: 439 RNIHLKNIVLDTHAGNAVFMAGLPESPLQNIRLENVNALGKYGLKAYNIK 488
>gi|375100882|ref|ZP_09747145.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661614|gb|EHR61492.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 485
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 130/420 (30%), Positives = 198/420 (47%), Gaps = 60/420 (14%)
Query: 27 SGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTG 86
S + P R + ++TD G G +T A AI R GG + VPPG Y TG
Sbjct: 52 STVKPPRIPQRRFTVTDHGADPTGHRDSTHAIAAAIATAA---RKGGGKVVVPPGEYHTG 108
Query: 87 SFNLTSHMTLYLAKGAVIKATQDTWNW-PLIAPLPSYGRGRERPGGRYMSFIHGDGLQDV 145
+ +L S++ L++++GA ++ +QD ++ P++ + R Y F++ G+ DV
Sbjct: 109 AIHLRSNIELHISRGATLRFSQDPADYLPMV-----HTRWEGIELYNYSPFVYAHGVHDV 163
Query: 146 VITGENGTIDGQG--AIWW---------------------NMWRQRTLP-----FT---- 173
ITG G +DGQ WW + +R +P FT
Sbjct: 164 AITG-GGVLDGQANPQHWWPWKTEPDGRGGVIETEHRDALHAMAERGVPVEQRRFTDSKL 222
Query: 174 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 233
RPN ++F S I++S V NSP W IHPV NV++ VT+ +P D PN+DG++P+SS
Sbjct: 223 RPNFVQFYRSSDILVSGVTLTNSPMWMIHPVLSENVIVDGVTLDSP-DGPNSDGVNPESS 281
Query: 234 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 293
NV I +S GDD +A+KSG + G G PS I I G+ +GSE SG
Sbjct: 282 RNVVIRNSSFDNGDDCIAIKSGRNADGRRIGVPSENIVIHDNRMFDGHGGVVIGSEMSGD 341
Query: 294 VENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYM-ENARKGIKI-----AGD 345
V NV AE ++ + + +KTN RGG + + D + E A I++ GD
Sbjct: 342 VRNVFAERNVMDSPRLDRALRIKTNSVRGGTVEGVYFRDNDIPEVADAVIRVNFHYEEGD 401
Query: 346 VGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGP 405
GD P V G+ I++V + + ++G + SP T + + + V P
Sbjct: 402 TGDF---------TPTVRGLHIENVHSVGGEFALYLRGYERSPVTDVTIRDSTFSEVTTP 452
>gi|336431286|ref|ZP_08611139.1| hypothetical protein HMPREF0991_00258 [Lachnospiraceae bacterium
2_1_58FAA]
gi|336019012|gb|EGN48745.1| hypothetical protein HMPREF0991_00258 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 519
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 105/310 (33%), Positives = 151/310 (48%), Gaps = 20/310 (6%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+++ DFG GDG +T + AI R + +P G Y S L H+T+ L
Sbjct: 81 LNVRDFGAKGDGVQDDTTYIQAAIMSCPRNSR-----VLIPEGTYRVTSLFLKDHLTMEL 135
Query: 99 AKGAVIKATQDTWNWPLI-APLPSYGRGRE--------RPGGRYMSFIHGDGLQDVVITG 149
AKGAV+ A + + ++ S + E + ++G G++DV I G
Sbjct: 136 AKGAVLSAYTERERFSILRGTYQSEDQENEYILGTWEGEAQNMFAGIMNGIGIKDVTICG 195
Query: 150 ENGTIDGQGAIWWNMW--RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCS 207
E GTIDG A W N W + RP +I + I+ + QNSP WNIHP +CS
Sbjct: 196 E-GTIDG-NASWENWWLDAKEVRGAARPRMIFLNRCEDVTITGITVQNSPSWNIHPYFCS 253
Query: 208 NVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPS 267
++ VT+L P SPNTDG++P+S +V I S GDD +AVK+G G Y PS
Sbjct: 254 HLKFIGVTVLGPKVSPNTDGLNPESCDDVEITGCLFSVGDDCIAVKAGKISVGAKYKVPS 313
Query: 268 SGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG--GFIRN 325
S I IR+ I +GSE + G++N+ A N G+ +KT GRG I
Sbjct: 314 SNIRIRQCCMRDGHGSITLGSEMAAGIKNLQARQCVFLNTDRGLRIKTRRGRGKDAVIDG 373
Query: 326 ITVSDVYMEN 335
I D+ M++
Sbjct: 374 ILFEDIRMDS 383
>gi|390944044|ref|YP_006407805.1| endopolygalacturonase [Belliella baltica DSM 15883]
gi|390417472|gb|AFL85050.1| endopolygalacturonase [Belliella baltica DSM 15883]
Length = 570
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 111/354 (31%), Positives = 165/354 (46%), Gaps = 61/354 (17%)
Query: 34 YRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSH 93
+ N +SI + G V DG T NT+AF +AI + GG + VP G++LTG S+
Sbjct: 55 FPNFTLSILEHGAVSDGVTKNTEAFAKAI---DAVASKGGGKVLVPRGIWLTGPIQFKSN 111
Query: 94 MTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGT 153
+ L+L GA+I ++D ++PLI + G R +S I+ DG++++ ITG GT
Sbjct: 112 INLHLEAGALILFSKDFDDYPLIE---TSFEGLNTV--RCISPIYADGVENIAITG-TGT 165
Query: 154 IDGQGAIW------------W--------------NMW---------------------- 165
+DG G W W +MW
Sbjct: 166 LDGNGDAWRPVKKSKMTSSQWKSLLASGGLLNEKGDMWFPSESSIKGYQASSNFNVPDLI 225
Query: 166 ----RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 221
+ F RP ++ NS+ I++ FQNSP WNIHP+ +++IR + + P
Sbjct: 226 DPSELETVKDFLRPVMVSIKNSKRILLDGPTFQNSPAWNIHPLMSEDIIIRNLNVRNPWY 285
Query: 222 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 281
S N DG+D +S NV I D+ GDD + KSG D+ G G P+ + ++
Sbjct: 286 SQNGDGLDLESCKNVLIYDNIFDVGDDAICFKSGKDQDGRDRGMPTENVVVKNNIVYHGH 345
Query: 282 SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 335
G +GSE SGGV NV VG+ K+ GRGG + NI +S++ M N
Sbjct: 346 GGFVIGSEMSGGVRNVHISDCTFMGTDVGLRFKSTRGRGGVVENIYISNIDMIN 399
>gi|154502614|ref|ZP_02039674.1| hypothetical protein RUMGNA_00427 [Ruminococcus gnavus ATCC 29149]
gi|153796806|gb|EDN79226.1| polygalacturonase (pectinase) [Ruminococcus gnavus ATCC 29149]
Length = 532
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 105/310 (33%), Positives = 151/310 (48%), Gaps = 20/310 (6%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+++ DFG GDG +T + AI R + +P G Y S L H+T+ L
Sbjct: 91 LNVRDFGAKGDGVQDDTTYIQAAIMSCPRNSR-----VLIPEGTYRVTSLFLKDHLTMEL 145
Query: 99 AKGAVIKATQDTWNWPLI-APLPSYGRGRE--------RPGGRYMSFIHGDGLQDVVITG 149
AKGAV+ A + + ++ S + E + ++G G++DV I G
Sbjct: 146 AKGAVLSAYTERERFSILRGTYQSEDQENEYILGTWEGEAQNMFAGIMNGIGIKDVTICG 205
Query: 150 ENGTIDGQGAIWWNMW--RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCS 207
E GTIDG A W N W + RP +I + I+ + QNSP WNIHP +CS
Sbjct: 206 E-GTIDG-NASWENWWLDAKEVRGAARPRMIFLNRCEDVTITGITVQNSPSWNIHPYFCS 263
Query: 208 NVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPS 267
++ VT+L P SPNTDG++P+S +V I S GDD +AVK+G G Y PS
Sbjct: 264 HLKFIGVTVLGPKVSPNTDGLNPESCDDVEITGCLFSVGDDCIAVKAGKISVGAKYKVPS 323
Query: 268 SGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG--GFIRN 325
S I IR+ I +GSE + G++N+ A N G+ +KT GRG I
Sbjct: 324 SNIRIRQCCMRDGHGSITLGSEMAAGIKNLQARQCVFLNTDRGLRIKTRRGRGKDAVIDG 383
Query: 326 ITVSDVYMEN 335
I D+ M++
Sbjct: 384 ILFEDIRMDS 393
>gi|337746270|ref|YP_004640432.1| hypothetical protein KNP414_02001 [Paenibacillus mucilaginosus
KNP414]
gi|336297459|gb|AEI40562.1| hypothetical protein KNP414_02001 [Paenibacillus mucilaginosus
KNP414]
Length = 475
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 128/407 (31%), Positives = 192/407 (47%), Gaps = 41/407 (10%)
Query: 33 RYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTS 92
R + D+ IT+FG V DG+T+NT+A + AI + G + VP G ++TG+ L S
Sbjct: 52 RPQADRFEITEFGAVADGQTINTEAIQAAIDAC-----TAGGKVVVPKGTFVTGAIFLKS 106
Query: 93 HMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIH----GDG-LQDVVI 147
MTLY+ +G V+ + + ++P+ + GRE+ Y S I+ +G L+ ++I
Sbjct: 107 RMTLYIEQGGVLLGSDNPDDYPV---MQYRWEGREQLC--YASLINTKDPAEGRLEQIII 161
Query: 148 TGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCS 207
GE G ID G ++ F R + N + + ++ + SP W +H +YC+
Sbjct: 162 EGE-GKIDANGMALFHKEMAEKKGF-RGRAVCLRNVDGVYLKDITVRQSPAWCVHLIYCN 219
Query: 208 NVVIRYVTILAPADSP--------NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEY 259
V + ++ I D N DG++PDS+S+V I +S I++ DD +A+KSG +E
Sbjct: 220 GVSVNHIEIHTKKDEQGRRYEHIFNGDGLNPDSTSDVYIFNSMIASQDDCIAIKSGRNEE 279
Query: 260 GIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 319
G G PS I I T S F G+A GSE SGGV NV +V +K GR
Sbjct: 280 GRRVGIPSQNIRISNCTFKSGF-GVATGSEMSGGVRNVRISDCRFEDVYSIATIKAPRGR 338
Query: 320 GGFIRNITVSDVYMENA----------RKGIKIAG--DVGDHPDDKFNP--NALPVVNGI 365
G I N+TV D + N R I I D DK V+ I
Sbjct: 339 GAVIENVTVEDCTLTNYSLEHEDCRWFRGAINIDQFYSHADFDADKVEEVDEGTSVIRNI 398
Query: 366 TIKD-VWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLK 411
+K+ V T + + GL SP I L N+N G G + +K
Sbjct: 399 HLKNIVLDTHAGNAVFMAGLPESPLQNIRLENVNALGKYGLKAYNIK 445
>gi|148269623|ref|YP_001244083.1| glycoside hydrolase family protein [Thermotoga petrophila RKU-1]
gi|147735167|gb|ABQ46507.1| glycoside hydrolase, family 28 [Thermotoga petrophila RKU-1]
Length = 446
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 124/410 (30%), Positives = 197/410 (48%), Gaps = 66/410 (16%)
Query: 36 NDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMT 95
N ++++ DFG GD +T +++F+ AI + L + GG L VP GV+LTG +L S++
Sbjct: 23 NREVNLLDFGARGDERTDCSESFKRAI---EELSKQGGGRLIVPEGVFLTGPIHLKSNIE 79
Query: 96 LYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTID 155
L++ KG + P++ + G E Y ++ ++V ITG +G +D
Sbjct: 80 LHV-KGTIKFIPDPERYLPVVL---TRFEGIELYN--YSPLVYALDCKNVAITG-SGVLD 132
Query: 156 GQG--AIWWNMWR-------------------------QRTLP----------FTRPNLI 178
G WW+ W+ +R P + RP+ +
Sbjct: 133 GSADNEHWWS-WKGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEERVFGKGHYLRPSFV 191
Query: 179 EFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCI 238
+F R++++ +V NSP W +HPV NV+IR + I + PN DGIDP+S + I
Sbjct: 192 QFYRCRNVLVEDVKIINSPMWCVHPVLSENVIIRNIEI--SSTGPNNDGIDPESCKYMLI 249
Query: 239 EDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR--VTGSSPFSGIAVGSETSGGVEN 296
E TGDD V +KSG D G G PS I +R V + G+ +GSE SGGV N
Sbjct: 250 EKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRN 309
Query: 297 VLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSD-----VYMENARKGIKIAGDVGDHPD 351
V+A + NV + +KTN RGG++ NI D V E R ++ + G++
Sbjct: 310 VVARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRYDNEEGEY-- 367
Query: 352 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 401
LPVV + +K++ T + + I+GL+N I +S+ ++G
Sbjct: 368 -------LPVVRSVFVKNLKATGGKYALRIEGLENDYVKDILISDTIMEG 410
>gi|395212459|ref|ZP_10399800.1| glycoside hydrolase [Pontibacter sp. BAB1700]
gi|394457168|gb|EJF11353.1| glycoside hydrolase [Pontibacter sp. BAB1700]
Length = 582
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 125/445 (28%), Positives = 201/445 (45%), Gaps = 84/445 (18%)
Query: 34 YRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSH 93
+ N +SITDFG V DG T +T AF +AI + + + GG ++ VP G++LTG L S+
Sbjct: 69 FGNYSVSITDFGAVSDGLTKSTAAFEKAIADV--VAKGGGKVI-VPRGMWLTGPIVLKSN 125
Query: 94 MTLYLAKGAVIKATQDTWNWPLIAP----LPSYGRGRERPGGRYMSFIHGDGLQDVVITG 149
+ L++ GA++ ++D ++PL+ L ++ R S I G L++V ITG
Sbjct: 126 INLHVEDGALVLFSKDFDDYPLVKTSFEGLNTF---------RCQSPISGRDLENVAITG 176
Query: 150 ENGTIDGQGAIW------------WN--------------MW------------------ 165
+ G IDG G W W +W
Sbjct: 177 K-GVIDGNGDAWRPVKKGKMTESQWKTLLKSGGVLSDDGKIWYPTESSKRGAVTGNFNVP 235
Query: 166 -----RQRTLP---FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL 217
+++ P F RP ++ +N + +++ FQNSP WNIHP+ C +V IR +T+
Sbjct: 236 LDLTEKEQFEPIKDFMRPVMVSLINCKKVLLDGPTFQNSPAWNIHPLMCEDVTIRNLTVR 295
Query: 218 APADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTG 277
P S N DG+D +S N I ++ GDD + +KSG D++G G P+ + ++
Sbjct: 296 NPWYSQNGDGLDLESCKNSVIYNNTFDVGDDAICIKSGKDQHGRDRGIPTENVIVKNNVV 355
Query: 278 SSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-A 336
G VGSE S GV+NV + +G+ K+ GRGG + NI +S++ M N
Sbjct: 356 YHGHGGFVVGSEMSSGVKNVHVSNCTFIGTDIGLRFKSTRGRGGVVENIYISNIDMINIP 415
Query: 337 RKGIKI------------AGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQ 382
+ I A G ++K P P I +K++ ++ +Q
Sbjct: 416 TQAISFNLFYGGNSPTMDAEQGGAKKEEKLMPVTEETPSFKDIYMKNIRVAGADEALALQ 475
Query: 383 GLKNSPFTGICLSNINLQGVAGPTS 407
GL + + N L+ G T+
Sbjct: 476 GLPEMNLQNVNIENAVLKAKKGITA 500
>gi|407978683|ref|ZP_11159511.1| glycoside hydrolase [Bacillus sp. HYC-10]
gi|407414714|gb|EKF36344.1| glycoside hydrolase [Bacillus sp. HYC-10]
Length = 463
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 128/417 (30%), Positives = 197/417 (47%), Gaps = 61/417 (14%)
Query: 31 PMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNL 90
PM + + + ++ +G G+ L+T A + AI L+ G + +P G +LTG+ L
Sbjct: 47 PM-FPDREFNVIHYGADEKGEVLSTNAIQSAIDDAHRLK---GGRVVIPKGTFLTGALEL 102
Query: 91 TSHMTLYLAKGAVIKATQDTWNW-PLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITG 149
SH+ L+L + A + +QD ++ PL+ L Y G E Y I+ +++ ITG
Sbjct: 103 KSHVELHLHENAYVTFSQDPRDYLPLV--LTRY-EGIELYN--YSPLIYAHHAENMAITG 157
Query: 150 ENGTIDGQG--AIWW----------NMWRQRTLPFT-------------------RPNLI 178
+GT+DG+G WW + R R L F R + I
Sbjct: 158 -SGTLDGRGDEHHWWPWKYGTNGQPSQDRDRQLLFEMAEKRIPVEERVFGEGHYLRSSFI 216
Query: 179 EFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCI 238
+ ++I+I V ++SP W IHPV C NV++R V I+ PNTDG++P+S NV I
Sbjct: 217 QPYQCQNILIEGVTVKDSPMWQIHPVLCENVIVRGVNII--GHGPNTDGVNPESCRNVLI 274
Query: 239 EDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVL 298
ED Y GDD +A+KSG +E G G PS I IRR G+ +GSE SGGV V
Sbjct: 275 EDCYFDNGDDCIAIKSGRNEDGRRIGVPSENIVIRRNEMRDGHGGVTIGSEISGGVRYVY 334
Query: 299 AEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI------AGDVGDHP 350
AE ++ N+ + +KTN RGG I +I + +++ + + GD G H
Sbjct: 335 AEDNIMDSPNLDRALRIKTNSVRGGTIEHIYFKNNTVKSLKHEVVCIDMMYEEGDAGPHK 394
Query: 351 DDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTS 407
PVV I ++ + + + I +SP T + + + V P S
Sbjct: 395 ---------PVVRHIEVEGLKSSGGRYGVKIAAYPHSPVTHFKMKDCVIDDVTYPLS 442
>gi|298480639|ref|ZP_06998835.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298273073|gb|EFI14638.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 469
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 126/401 (31%), Positives = 196/401 (48%), Gaps = 57/401 (14%)
Query: 41 ITDFGG-VGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
ITDFG V D L +A +AI +Q GGT+L VP G + TG L S + +L
Sbjct: 52 ITDFGAKVDDESNLCHEAINQAI--LQCSLAGGGTVL-VPKGTFYTGPITLKSDVNFHLE 108
Query: 100 KGAVIK-ATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
+GAV+K +T + +P + + G + R + + +G+ ++ ITG+ G IDGQG
Sbjct: 109 EGAVLKFSTDQSLYFPAVL---TRWEGIDCYNARPLIYAYGE--SNIAITGK-GIIDGQG 162
Query: 159 AI--WWNM-------W-----------RQRTLPF-----------------TRPNLIEFM 181
+I WW M W R+R + RP L+
Sbjct: 163 SIDAWWPMCGSAKYGWKEGMVAQRNGGRERLQMYGETSTPVYKRLMKPEDGMRPQLLNLH 222
Query: 182 NSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDS 241
+ +I+I V NSPFW IHP++C ++++ VT+ PN DG DP+S NV IE+
Sbjct: 223 SCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFNRG--PNGDGCDPESCKNVLIENC 280
Query: 242 YISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEH 301
TGDD +A+KSG +E G + PS I +R + G+ +GSE SGG N+ E
Sbjct: 281 TFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMKNGHGGVVIGSEISGGYRNLFVED 340
Query: 302 INLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNAL 359
+ N+ I +KT+ RGG I NI V +V + R+ + + ++ +K
Sbjct: 341 CQMDSPNLDRVIRIKTSTCRGGLIENIFVRNVTVGQCREAV-LRINLQYENREKCKRGFE 399
Query: 360 PVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 400
P+V + +K+V K + LI GL++ +SNI+++
Sbjct: 400 PIVRNVHLKNVTCEKSELGVLIIGLEDDKH----VSNISIE 436
>gi|15891800|ref|NP_357472.1| polygalacturonase-like protein [Agrobacterium fabrum str. C58]
gi|15160276|gb|AAK90257.1| polygalacturonase-like protein [Agrobacterium fabrum str. C58]
Length = 517
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 113/370 (30%), Positives = 175/370 (47%), Gaps = 25/370 (6%)
Query: 49 DGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQ 108
+G N A A+ + +GGTL + PGV+ L S MTL+LA+GAV++A
Sbjct: 101 EGARANATALENAVAAVP----AGGTL-RLGPGVWTAFPVRLKSDMTLHLAEGAVLRAPS 155
Query: 109 DTWNWPLIAPLPSYGRG----RERPGGRYMSFIHGDGLQDVVITGENGTIDGQG--AIWW 162
WP++ GR P + + +H G ++VI G G +DG G WW
Sbjct: 156 VRNRWPILPARDEAGRMLGSWEGLPDACFAAPVHAIGADNLVIEGR-GILDGSGDKGDWW 214
Query: 163 NMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS 222
+ ++ RP + ++ + +N+ W IHP C ++ +TI+AP DS
Sbjct: 215 SWPKETREGARRPRGLHLVSCHKTQLLGFTIRNAASWTIHPQGCEDLTAAGLTIIAPHDS 274
Query: 223 PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH--PSSGITIRRVTGSSP 280
PNTDG +P+S NV I S GDD +AVK+G H + GI++R
Sbjct: 275 PNTDGFNPESCRNVMISGVRFSVGDDCIAVKAGKRGPDGEDDHLAETRGISVRHCLMQRG 334
Query: 281 FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 340
G+ +GSE SGGV +V E ++ G+ +KT GRGG + NIT+ V ++ + +
Sbjct: 335 HGGLVIGSEMSGGVHDVTVEDCDMIGTDRGLRLKTRRGRGGMVGNITMRRVLLDGVQTAL 394
Query: 341 KIAG----DVGDHPD--DKFNP----NALPVVNGITIKDVWGTKV-QQSGLIQGLKNSPF 389
D H D NP + P V+GIT++DV + +G+ GL +P
Sbjct: 395 SANAHYHCDADGHDDWVQSRNPAPVNDGTPFVDGITVEDVEIRNLAHAAGVFLGLPEAPI 454
Query: 390 TGICLSNINL 399
I + N+ +
Sbjct: 455 RNIVVRNLTI 464
>gi|452973315|gb|EME73137.1| glycoside hydrolase [Bacillus sonorensis L12]
Length = 436
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 123/406 (30%), Positives = 194/406 (47%), Gaps = 52/406 (12%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+ +T FG GKT +T AF++AI + GG + VP GV+LTG+ L S++ L+
Sbjct: 23 RFDVTRFGADSGGKTDSTAAFQQAI---DEAHQKGGGRVTVPKGVFLTGALRLKSNVELH 79
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
+ K AVI+ +Q+ ++ L A L + G E Y I+ +++ ITG G +DGQ
Sbjct: 80 VTKDAVIRFSQNPADY-LPAVLTRF-EGVELYN--YSPLIYAYEAENIAITG-GGMLDGQ 134
Query: 158 G--AIWWNMWR-------------------QRTLP----------FTRPNLIEFMNSRSI 186
WW R +R +P + RPN I+ +++
Sbjct: 135 ADDRHWWPWKRGTNGQPSQEKDRDALFEMAERNVPVEERRFGTGHYLRPNFIQPYRCKNV 194
Query: 187 IISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTG 246
I V NSP W IHPV C NV + V ++ PNTDG+DP+S ++ I++ G
Sbjct: 195 FIQGVTVMNSPMWQIHPVLCENVTVDGVKVIG--HGPNTDGVDPESCKSMIIKNCLFDNG 252
Query: 247 DDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEH--INL 304
DD +A+KSG + G PS I I G+ +GSE SGGV+NV AE ++
Sbjct: 253 DDCIAIKSGRNADGRRINVPSENIVIENNEMKDGHGGVTIGSEISGGVKNVFAEGNLMDS 312
Query: 305 YNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK---GIKIAGDVGDHPDDKFNPNALPV 361
N+ + +KTN RGG ++NI +++ ++ I + + GD + K PV
Sbjct: 313 PNLDRALRIKTNSVRGGVLKNIYFYHNVVKSLKQEVIAIDMEYEEGDAGEFK------PV 366
Query: 362 VNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTS 407
V GI + ++ + + +SP TG+ ++N + V P
Sbjct: 367 VRGIEVDELKSAGGRYGIRVLAYDHSPVTGLKVTNSEINDVNIPME 412
>gi|409199011|ref|ZP_11227674.1| endopolygalacturonase [Marinilabilia salmonicolor JCM 21150]
Length = 568
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 126/438 (28%), Positives = 182/438 (41%), Gaps = 85/438 (19%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+SI +FG VGD T N +AF AI + + GG + VP G++LTG + S++ L+L
Sbjct: 59 VSIVEFGAVGDAVTPNGEAFTRAI---EQVSEKGGGRVIVPRGIWLTGPIQMKSNINLHL 115
Query: 99 AKGAVIKATQDTWNWPLIAP----LPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
GAVI+ + + +PLI L +Y R +S IH L+++ ITG NG I
Sbjct: 116 EDGAVIRFSSNFDEYPLIKTSFEGLDTY---------RCISPIHAHNLENIAITG-NGVI 165
Query: 155 DGQGAIWWNMWRQRTLP------------------------------------------- 171
DG G W + + + P
Sbjct: 166 DGNGDAWRPVKKSKMTPSQWKKLVQSGGVLSDDGKIWYPSEKSKAGDGRDNFNVPDFDNR 225
Query: 172 --------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 223
F RP ++ + I++ FQNSP WNIHP+ +V IR +TI P S
Sbjct: 226 DAFEEVKDFLRPVMVSIKECKRILLDGPTFQNSPAWNIHPLMSEDVTIRNLTIRNPWYSQ 285
Query: 224 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 283
N DG+D +S NV I ++ GDD + KSG +E G G P+ + ++ G
Sbjct: 286 NGDGLDLESCKNVVIYNNTFDVGDDAICFKSGKNEDGRRRGIPTENVIVKNNIVYHGHGG 345
Query: 284 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM-----ENARK 338
VGSE SG V NV VG+ K+ GRGG + NI +S++ M E R
Sbjct: 346 FVVGSEMSGDVRNVHVSDCTFMGTDVGLRFKSTRGRGGVVENIYISNIDMIDIPTEPIRF 405
Query: 339 GIKIAG-----DVGDHPDDKFNP-------NALPVVNGITIKDVWGTKVQQSGLIQGLKN 386
+ G D GD+ P P I +K++ + GL
Sbjct: 406 NLFYGGNAPVMDDGDNSAPSEEPAEAVSVTEETPSFRNIFMKNIRANGFGNAAFFMGLPE 465
Query: 387 SPFTGICLSNINLQGVAG 404
+ L N L+G G
Sbjct: 466 MNLQNVHLENAVLRGAQG 483
>gi|268612424|pdb|3JUR|A Chain A, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612425|pdb|3JUR|B Chain B, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612426|pdb|3JUR|C Chain C, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612427|pdb|3JUR|D Chain D, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
Length = 448
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 125/408 (30%), Positives = 195/408 (47%), Gaps = 66/408 (16%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
++++ DFG GDG+T +++F+ AI + L + GG L VP GV+LTG +L S++ L+
Sbjct: 27 EVNLLDFGARGDGRTDCSESFKRAI---EELSKQGGGRLIVPEGVFLTGPIHLKSNIELH 83
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
+ KG + P++ + G E Y ++ ++V ITG +G +DG
Sbjct: 84 V-KGTIKFIPDPERYLPVVL---TRFEGIELYN--YSPLVYALDCENVAITG-SGVLDGS 136
Query: 158 G--AIWWNMWR-------------------------QRTLP----------FTRPNLIEF 180
WW W+ +R P + RP+ ++F
Sbjct: 137 ADNEHWWP-WKGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEERVFGKGHYLRPSFVQF 195
Query: 181 MNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIED 240
R++++ V NSP W IHPV NV+IR + I + PN DGIDP+S + IE
Sbjct: 196 YRCRNVLVEGVKIINSPMWCIHPVLSENVIIRNIEI--SSTGPNNDGIDPESCKYMLIEK 253
Query: 241 SYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR--VTGSSPFSGIAVGSETSGGVENVL 298
TGDD V +KSG D G G PS I +R V + G+ +GSE SGGV NV+
Sbjct: 254 CRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVV 313
Query: 299 AEHINLYNVGVGIHVKTNIGRGGFIRNITVSD-----VYMENARKGIKIAGDVGDHPDDK 353
A + NV + +KTN RGG++ NI D V E R ++ + G++
Sbjct: 314 ARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRYDNEEGEY---- 369
Query: 354 FNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 401
LPVV + +K++ T + + I+GL+N I +S+ ++G
Sbjct: 370 -----LPVVRSVFVKNLKATGGKYAVRIEGLENDYVKDILISDTIIEG 412
>gi|329894082|ref|ZP_08270067.1| Glycoside hydrolase, family 77 [gamma proteobacterium IMCC3088]
gi|328923254|gb|EGG30574.1| Glycoside hydrolase, family 77 [gamma proteobacterium IMCC3088]
Length = 487
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 126/410 (30%), Positives = 185/410 (45%), Gaps = 66/410 (16%)
Query: 36 NDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMT 95
+D+ + +FG V DG + A ++AI +H GG + GVYLTG +L S +
Sbjct: 58 SDRFVVENFGAVSDGVFDCSDAIQKAI---EHAESQGGGTVVFTQGVYLTGPIHLRSKIA 114
Query: 96 LYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTID 155
L+L K A +K D N L A + G E G + I+ GL DV ITG+ GT+D
Sbjct: 115 LHLEKDATLKFVTDP-NRYLPAVFTRW-EGMELMG--FSPLIYAYGLNDVAITGQ-GTLD 169
Query: 156 G--QGAIWWNMWR---------------------------QRTLP----------FTRPN 176
G WW W+ +R +P F RP
Sbjct: 170 GGANDQTWWP-WKGPHKEAHWDLIEGQDQKPARDYLFAMAERGVPPRERVFADGGFLRPP 228
Query: 177 LIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNV 236
++F + + I++ + N+PFW IHPV +V IR V + PN+DG DP+S V
Sbjct: 229 FLQFYDCQRILVEGIKITNAPFWLIHPVLSRDVTIRGVH--CQSYGPNSDGCDPESCERV 286
Query: 237 CIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVEN 296
IED TGDD +A+KSG + G G P + ++ G+ +GSE SGGV N
Sbjct: 287 VIEDCVFDTGDDCIALKSGRNADGRRIGVPCKDVVVQNCHMKEGHGGVVIGSEISGGVAN 346
Query: 297 VLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-----AGDVGDH 349
V H + ++ I +KTN RGG I ++ S + + + + I GD G
Sbjct: 347 VHVRHCTMDSPHLERAIRIKTNAQRGGLIEHLRYSKITIGSVKDVFVINFYYEEGDRG-- 404
Query: 350 PDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL 399
+P+V I I D+ K Q+ ++G SP T + L N N+
Sbjct: 405 -------KWMPLVRDIEITDLTVAKAQRVFNLRGFPQSPITDVSLRNWNV 447
>gi|335034438|ref|ZP_08527786.1| polygalacturonase-like protein [Agrobacterium sp. ATCC 31749]
gi|333794034|gb|EGL65383.1| polygalacturonase-like protein [Agrobacterium sp. ATCC 31749]
Length = 517
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/370 (30%), Positives = 176/370 (47%), Gaps = 25/370 (6%)
Query: 49 DGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQ 108
+G N A A+ + +GGTL + PGV+ L S MTL+LA+GAV++A
Sbjct: 101 EGARANATALENAVAAVP----AGGTL-RLGPGVWTAFPVRLKSEMTLHLAEGAVLRAPS 155
Query: 109 DTWNWPLIAPLPSYGRG----RERPGGRYMSFIHGDGLQDVVITGENGTIDGQG--AIWW 162
+WP++ GR P + + + G ++VI G G +DG G WW
Sbjct: 156 VRNSWPILPARDEAGRMLGSWEGLPDACFAAPVDAIGADNLVIEGR-GILDGSGDKGDWW 214
Query: 163 NMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS 222
+ ++ RP + ++ R + +N+ W IHP C ++ +TI+AP DS
Sbjct: 215 SWPKETRDGARRPRGLHLVSCRKTQLLGFTIRNAASWTIHPQGCEDLTAAGLTIIAPHDS 274
Query: 223 PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH--PSSGITIRRVTGSSP 280
PNTDG +P+S NV I S GDD +AVK+G H + GI++R
Sbjct: 275 PNTDGFNPESCRNVMISGVRFSVGDDCIAVKAGKRGPDGEDDHLAETRGISVRHCLMQRG 334
Query: 281 FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 340
G+ +GSE SGGV +V E ++ G+ +KT GRGG + NIT+ V ++ + +
Sbjct: 335 HGGLVIGSEMSGGVHDVTVEDCDMIGTDRGLRLKTRRGRGGIVSNITMRRVLLDGVQTAL 394
Query: 341 KIAG----DVGDHPD--DKFNP----NALPVVNGITIKDVWGTKV-QQSGLIQGLKNSPF 389
D H D NP + P V+GIT++DV + +G+ GL +P
Sbjct: 395 SANAHYHCDADGHDDWVQSRNPAPVNDGTPFVDGITVEDVEIRNLAHAAGVFLGLPEAPI 454
Query: 390 TGICLSNINL 399
I + N+ +
Sbjct: 455 RNIVVRNLTI 464
>gi|346223719|ref|ZP_08844861.1| glycoside hydrolase family protein [Anaerophaga thermohalophila DSM
12881]
Length = 567
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 158/350 (45%), Gaps = 68/350 (19%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
++I+DFG +GDG T N++AF +I + +GG + V G++LTG + S++ LYL
Sbjct: 58 VNISDFGAIGDGITDNSEAFAASI---DDVAANGGGKVVVSRGIWLTGPIKMKSNINLYL 114
Query: 99 AKGAVIKATQDTWNWPLIAP----LPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
GAV+ + D +PLI L +Y R MS IH L+++ TG NG
Sbjct: 115 EDGAVVLFSSDFDKYPLIETSFEGLETY---------RCMSPIHAHNLENIAFTG-NGVF 164
Query: 155 DGQGAIW---------WNMWR--------------------------------------- 166
DG G W + W+
Sbjct: 165 DGSGDAWRPVKKSKMTASQWKNLVESGGVLSDDGKIWYPTEKSKAGDGKDNFNVPDLSSK 224
Query: 167 ---QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 223
++ F RP ++ + +++ FQNSP WNIHP+ NV+IR +TI P S
Sbjct: 225 EEYEKVKDFLRPVMVSIKECKGVLLDGPTFQNSPAWNIHPLMSENVIIRNLTIRNPWYSQ 284
Query: 224 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 283
N DG+D +S NV I ++ GDD + KSG +E G G P+ + ++ G
Sbjct: 285 NGDGLDLESCKNVLIYNNSFDVGDDAICFKSGKNEDGRRRGMPTENVIVKNNIVYHGHGG 344
Query: 284 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
VGSE SGGV NV G+ K+ GRGG + NI +SD+ M
Sbjct: 345 FVVGSEMSGGVRNVHVSKCTFMGTDTGLRFKSTRGRGGVVENIYISDIDM 394
>gi|160880699|ref|YP_001559667.1| glycoside hydrolase family protein [Clostridium phytofermentans
ISDg]
gi|160429365|gb|ABX42928.1| glycoside hydrolase family 28 [Clostridium phytofermentans ISDg]
Length = 474
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 121/431 (28%), Positives = 184/431 (42%), Gaps = 73/431 (16%)
Query: 34 YRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSH 93
+ + ++SITD+ V G NT A +AI + L GG + VP G++LTG L S+
Sbjct: 11 FPDRQVSITDYKAVSGGIESNTAAINQAITELSKL---GGGTVNVPEGIWLTGPITLKSN 67
Query: 94 MTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGT 153
+ L+L KGA+I ++ +P+I L +Y +P R +S IH +++ ITGE G
Sbjct: 68 INLHLEKGALITFDKNPEEYPII--LTNY---EGQPRLRAVSPIHAFDEENIAITGE-GV 121
Query: 154 IDGQGAIWW---------NMWRQR------------------------------------ 168
IDG G W W+ R
Sbjct: 122 IDGNGHEWRPLKEFKVTKKQWQARLKKSPYVIDTKEGGIWYPSKTSYEGCLEGEVSVEDP 181
Query: 169 --------TLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA 220
RP + + I+I V QNSP WN+HP+ C+N+ +R I
Sbjct: 182 DALKKAAPNYDLYRPVMTNLVRCNKILIEGVTLQNSPAWNLHPLLCTNLTLRNAFIRNAN 241
Query: 221 DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP 280
+ N DG+D +S V I GDD + +KSG + G P+ + IR
Sbjct: 242 FAQNGDGLDLESCRFVDIYGVKFDVGDDAICIKSGKNAIGRKITVPTEHVRIRDCVVYHG 301
Query: 281 FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG- 339
G +GSE S GV +V+ E+ GI K+ IGRGG + +IT+ ++ M + +
Sbjct: 302 HGGFVIGSEMSRGVRDVVIENCLFLGTDTGIRFKSAIGRGGVVEDITIRNIQMTDIEEDA 361
Query: 340 ---------IKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT 390
++ D P D + +P ITI+DV + Q+ I GL+ P
Sbjct: 362 IIFTMGYTLFRLDHQASDEP-DTISKEDIPEFKNITIRDVNCLRAGQAIKIDGLEQMPIH 420
Query: 391 GICLSNINLQG 401
I L N+ +Q
Sbjct: 421 DIILENVMIQA 431
>gi|420264265|ref|ZP_14766898.1| polygalacturonase [Enterococcus sp. C1]
gi|394768641|gb|EJF48547.1| polygalacturonase [Enterococcus sp. C1]
Length = 438
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 160/302 (52%), Gaps = 16/302 (5%)
Query: 36 NDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMT 95
N +++ D G + L T+A +E +I L + GG + G Y TG+ L S++
Sbjct: 2 NIQLTTADLQG---KEGLLTEAIQE---KIDELHQQGGGRITFSAGRYPTGALFLKSNIE 55
Query: 96 LYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTID 155
L+L GA + + D ++P++ S G +R Y S ++ + +++ +TG G +D
Sbjct: 56 LHLLLGATLVFSDDPKDYPVVV---SRWEGVKRE--VYASCLYAENAENIAVTGL-GMLD 109
Query: 156 GQGAIWWNMWRQ--RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRY 213
GQG WW +R+ L + RP LI F + + I + ++ +SP W ++P+ C N+ I
Sbjct: 110 GQGQRWWKTFRENREQLAYPRPKLISFDSCQQITLKDIRLVDSPSWTVNPILCQNLTIDN 169
Query: 214 VTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIR 273
+ I PADSPNTDGIDP+S NV I + +I GDD +A+KSG ++ ITI
Sbjct: 170 LRIKNPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKSGTEDTKERVA--CENITIV 227
Query: 274 RVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
+ +GSE SG + NV + + GI +K+ GRGG I +I V+++ M
Sbjct: 228 NCHMLHGHGAVVLGSEMSGDIRNVTISNCIFQDTDRGIRLKSRRGRGGTIEDIRVNNIVM 287
Query: 334 EN 335
+N
Sbjct: 288 DN 289
>gi|404405418|ref|ZP_10997002.1| glycoside hydrolase family protein [Alistipes sp. JC136]
Length = 1278
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 126/393 (32%), Positives = 193/393 (49%), Gaps = 43/393 (10%)
Query: 41 ITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLT-GSFNLTSHMTLYLA 99
ITDFG G+ A AI R R GG + +P G + + G L SH+ L+L
Sbjct: 44 ITDFGAEAGGEADCRPAVAAAIDRCS---REGGGRVVIPAGRWFSKGPVVLKSHVNLHLE 100
Query: 100 KGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGA 159
GAV+ + D ++ L A L + G E Y I+ ++ +TG+ G IDG+G+
Sbjct: 101 AGAVLFFSSDEADY-LPAVLTRW-EGTEVYN--YSPLIYAWQATNIAVTGQ-GVIDGRGS 155
Query: 160 IWWNMWRQRTLP------------------------FTRPNLIEFMNSRSIIISNVIFQN 195
+ W+ R + RP ++E +N ++I V F +
Sbjct: 156 HNFAHWKPRQKADQKALRRMGTDLVPVSDRLFGEGHYLRPAMLEPVNCTDVLIEGVTFVD 215
Query: 196 SPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSG 255
SPFW IHP+ C NV +R VT+ + + N DG DP+S +NV IED TGDD +A+KSG
Sbjct: 216 SPFWVIHPLACENVTVRGVTV--DSYNLNNDGCDPESCTNVLIEDCTFRTGDDGIAIKSG 273
Query: 256 WDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKT 315
D G P+ + IR + S +G+ +GSE SGGV NV+ E++ + +VG GI+ K+
Sbjct: 274 RDNDAWRIGRPTENVLIRNCSFRSKANGVCIGSEISGGVRNVVVENVRMSDVGNGIYFKS 333
Query: 316 NIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFN--PNALPVVNGITIKDVWGT 373
N+ RGG+I ++ V V ++ RK + + PD K N G I+DV
Sbjct: 334 NLDRGGYIEDVFVCGVEADSVRKTLVLF-----EPDYKSESRENHPTAFRGFVIEDVRAQ 388
Query: 374 KVQQSGL-IQGLKNSPFTGICLSNINLQGVAGP 405
++G+ I+G + P + +S + L P
Sbjct: 389 WAGKAGIDIRGFADMPVRDVTISRLTLASTPEP 421
>gi|412993465|emb|CCO13976.1| predicted protein [Bathycoccus prasinos]
Length = 635
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 122/388 (31%), Positives = 194/388 (50%), Gaps = 33/388 (8%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+++ G VGDG T+NT+ + A+ + + L PPG +LTG L S++ + L
Sbjct: 194 VNVALAGAVGDGMTVNTETIQNALDSLTMKAQGRTQTLAFPPGRWLTGPLELKSNVKIVL 253
Query: 99 -AKGAVIKATQDTWNWPL-----IAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENG 152
+ ++A + T WP+ LPS + P + +FIH ++ I+G G
Sbjct: 254 DGPRSFLEAVKSTDLWPIDDWKEHPSLPS-----DDPTPIFRAFIHAYNQTNIEISG-GG 307
Query: 153 TIDGQGAIWWNMWR-QRTLPFTR-----PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYC 206
TI+G G WW+ Q+ P R PNL+ + + I N++ NSP + + P YC
Sbjct: 308 TINGHGDFWWDRKTDQKYSPSMRKKAHVPNLVHLVGCSDVKIENIVLTNSPHFTVRPQYC 367
Query: 207 SNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGD--DLVAVKSGWDEYGIAYG 264
+ V + + I PA+SP T+G+ DS+SN + DS+I+TGD D VA+KSG D +G
Sbjct: 368 NKVSVSRIHISNPANSPGTNGVVFDSTSNSFLRDSFITTGDKEDAVAIKSGKDYHGRKAN 427
Query: 265 HPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHI------NLYNVGVGIHVKTNIG 318
PS I + VT + ++VGSE SGGV N++ I N + VG VKT G
Sbjct: 428 VPSKNIRVEHVTILGGHA-LSVGSEMSGGVSNIIFSDITFDGRNNKFGVG-SARVKTMRG 485
Query: 319 RGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNP---NALPVVNGITIKDVWGTKV 375
RGG + IT ++ NA +++ + D P P+V I K+V +
Sbjct: 486 RGGVVDQITFQNIRGWNALYALELY-EYYSKQDTNVGPVSREETPIVKNINFKNVHIEGI 544
Query: 376 QQ-SGLIQGLKNSPFTGICLSNINLQGV 402
++ +G+I GL + + + N++L V
Sbjct: 545 KRYAGVIAGLPEMAVSNLVIENVHLTNV 572
>gi|150388731|ref|YP_001318780.1| glycoside hydrolase [Alkaliphilus metalliredigens QYMF]
gi|149948593|gb|ABR47121.1| glycoside hydrolase, family 28 [Alkaliphilus metalliredigens QYMF]
Length = 519
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 119/395 (30%), Positives = 179/395 (45%), Gaps = 31/395 (7%)
Query: 29 IVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSF 88
+ Y + +++ DFG G G+ +T + + AI R + +P G YLT
Sbjct: 74 VFKTEYESVTLNVKDFGATGTGEKHDTASLQAAIMSCPPSGR-----VLIPEGTYLTAPL 128
Query: 89 NLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRER---------PGGRYMSFIHG 139
L S++TL + KGA + + ++P++ G++ P + S + G
Sbjct: 129 YLKSNITLEIQKGAKLLGSNVREDYPILPGTTKTTDGKDEFYLGSWEGDPMDCFASLLTG 188
Query: 140 DGLQDVVITGENGTIDGQGAI--WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSP 197
G+ +V I G+ G IDG + WW +++ + + RP LI N R I+I V QNSP
Sbjct: 189 IGVNNVKIIGK-GIIDGNASFDNWWKDAKKKRVAW-RPRLIFIKNCRDILIEEVTVQNSP 246
Query: 198 FWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWD 257
W IHP++ N+ + + ++ P DSPNTDGI+P+S NV I S GDD +A+KSG
Sbjct: 247 SWTIHPMFSQNLQLINLKVINPKDSPNTDGINPESCQNVKIIGVDFSVGDDCIAIKSGKL 306
Query: 258 EYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNI 317
G S I IR GI +GSE +GGV+NV A GI +KT
Sbjct: 307 YLGQRLKIASQDIMIRNCHMKFGHGGIVIGSEMAGGVKNVSAIRCIFEETDRGIRIKTRR 366
Query: 318 GRG--GFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFN----------PNALPVVNGI 365
GRG G I I ++ M+ I PD K PVV +
Sbjct: 367 GRGKDGVINGINAENIVMKKVLTPFVINTFYFCDPDGKTEYVWSKEKLPVDERTPVVKNV 426
Query: 366 TIKDVWGTKVQ-QSGLIQGLKNSPFTGICLSNINL 399
+K++ + +G I GL I L +I +
Sbjct: 427 YLKNMICEDCEVAAGFIYGLPECKIENIILEDIKV 461
>gi|15643203|ref|NP_228247.1| exo-poly-alpha-D-galacturonosidase [Thermotoga maritima MSB8]
gi|4980944|gb|AAD35522.1|AE001722_6 exo-poly-alpha-D-galacturonosidase, putative [Thermotoga maritima
MSB8]
Length = 448
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 124/408 (30%), Positives = 195/408 (47%), Gaps = 66/408 (16%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
++++ DFG GDG+T +++F+ AI + L + GG L VP GV+LTG +L S++ L+
Sbjct: 27 EVNLLDFGARGDGRTDCSESFKRAI---EELSKQGGGRLIVPEGVFLTGPIHLKSNIELH 83
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
+ KG + P++ + G E Y ++ ++V ITG +G +DG
Sbjct: 84 V-KGTIKFIPDPERYLPVVL---TRFEGIELYN--YSPLVYALDCENVAITG-SGVLDGS 136
Query: 158 G--AIWWNMWR-------------------------QRTLP----------FTRPNLIEF 180
WW W+ +R P + RP+ ++F
Sbjct: 137 ADNEHWWP-WKGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEERVFGKGHYLRPSFVQF 195
Query: 181 MNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIED 240
R++++ V NSP W +HPV NV+IR + I + PN DGIDP+S + IE
Sbjct: 196 YRCRNVLVEGVKIINSPMWCVHPVLSENVIIRNIEI--SSTGPNNDGIDPESCKYMLIEK 253
Query: 241 SYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR--VTGSSPFSGIAVGSETSGGVENVL 298
TGDD V +KSG D G G PS I +R V + G+ +GSE SGGV NV+
Sbjct: 254 CRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVV 313
Query: 299 AEHINLYNVGVGIHVKTNIGRGGFIRNITVSD-----VYMENARKGIKIAGDVGDHPDDK 353
A + NV + +KTN RGG++ NI D V E R ++ + G++
Sbjct: 314 ARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRYDNEEGEY---- 369
Query: 354 FNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 401
LPVV + +K++ T + + I+GL+N I +S+ ++G
Sbjct: 370 -----LPVVRSVFVKNLKATGGKYAVRIEGLENDYVKDILISDTIIEG 412
>gi|418045389|ref|ZP_12683485.1| glycoside hydrolase family 28 [Thermotoga maritima MSB8]
gi|351678471|gb|EHA61618.1| glycoside hydrolase family 28 [Thermotoga maritima MSB8]
Length = 446
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 126/408 (30%), Positives = 195/408 (47%), Gaps = 66/408 (16%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
++++ DFG GDG+T +++F+ AI + L + GG L VP GV+LTG +L S++ L+
Sbjct: 25 EVNLLDFGARGDGRTDCSESFKRAI---EELSKQGGGRLIVPEGVFLTGPIHLKSNIELH 81
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
+ IK D + L L + G E Y ++ ++V ITG +G +DG
Sbjct: 82 VK--GTIKFIPDPERY-LPVVLTRF-EGIELYN--YSPLVYALDCENVAITG-SGVLDGS 134
Query: 158 G--AIWWNMWR-------------------------QRTLP----------FTRPNLIEF 180
WW W+ +R P + RP+ ++F
Sbjct: 135 ADNEHWWP-WKGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEERVFGKGHYLRPSFVQF 193
Query: 181 MNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIED 240
R++++ V NSP W +HPV NV+IR + I + PN DGIDP+S + IE
Sbjct: 194 YRCRNVLVEGVKIINSPMWCVHPVLSENVIIRNIEI--SSTGPNNDGIDPESCKYMLIEK 251
Query: 241 SYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR--VTGSSPFSGIAVGSETSGGVENVL 298
TGDD V +KSG D G G PS I +R V + G+ +GSE SGGV NV+
Sbjct: 252 CRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVV 311
Query: 299 AEHINLYNVGVGIHVKTNIGRGGFIRNITVSD-----VYMENARKGIKIAGDVGDHPDDK 353
A + NV + +KTN RGG++ NI D V E R ++ + G++
Sbjct: 312 ARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRYDNEEGEY---- 367
Query: 354 FNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 401
LPVV + +K++ T + + I+GL+N I +S+ ++G
Sbjct: 368 -----LPVVRSVFVKNLKATGGKYAVRIEGLENDYVKDILISDTIIEG 410
>gi|338211743|ref|YP_004655796.1| Exo-poly-alpha-galacturonosidase [Runella slithyformis DSM 19594]
gi|336305562|gb|AEI48664.1| Exo-poly-alpha-galacturonosidase [Runella slithyformis DSM 19594]
Length = 781
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 121/450 (26%), Positives = 198/450 (44%), Gaps = 83/450 (18%)
Query: 34 YRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSH 93
+R D +I +G DG T+NTKA +AI + +GG + VP G++LTG L ++
Sbjct: 266 FRKDTFNICRYGAKADGLTVNTKAISQAI---EACHAAGGGTVLVPAGLWLTGPIVLKNN 322
Query: 94 MTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGT 153
+ L++AK A+++ +++ ++P++ + G+E R + I G L ++ ITGE G
Sbjct: 323 VNLHIAKNALLQFSRNHDDYPIVI---TTWEGQE--SYRCQAPIWGVDLTNIGITGE-GV 376
Query: 154 IDGQGAIWWNMWRQR---------------------------------TLP--------- 171
+DG G +W + R + LP
Sbjct: 377 LDGGGEVWRAIKRDKQTNTQWANLLRSGGVVSEKGDLWYPSEKSKKGNNLPNAGRILNGI 436
Query: 172 ------------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP 219
F RPN+I +++++ V FQNSP W +HP+ C +V IR VT+
Sbjct: 437 HPTPTELESYKDFLRPNMISLTRCKNVLLEGVTFQNSPAWTMHPLLCEHVSIRNVTVKNH 496
Query: 220 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS 279
+ N+D +D +S N +E TGDD + +KSG DE G G P+ I+
Sbjct: 497 WYAQNSDALDLESCRNGIVEGCTFDTGDDGITIKSGRDEQGRKRGVPTENFIIKDCKVYH 556
Query: 280 PFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN---- 335
G +GSE SGGV N+ + VG+ KT GRGG + +I V+DV M
Sbjct: 557 AHGGFVIGSEMSGGVRNMFVSNCTFMGSDVGLRFKTARGRGGVVEDIYVTDVNMTEIPGE 616
Query: 336 ---------ARKGIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGL 384
A+ + G+ + P K P P +K++ + + L++GL
Sbjct: 617 AILFDMYYAAKDPVPQEGESNELPAIKAEPLNEGTPQFKNFYLKNIICRGAETAILVRGL 676
Query: 385 KNSPFTGICLSNINLQGVAGPTSPPLKCSD 414
+ + NIN++ + L C +
Sbjct: 677 PE-----MSIKNINVENAVIEANKGLVCVE 701
>gi|374309036|ref|YP_005055466.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358751046|gb|AEU34436.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 471
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 124/405 (30%), Positives = 194/405 (47%), Gaps = 40/405 (9%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
K+++ DFG VGDGKT +T A ++ + R L GG ++VP G YLTG+ L S+ L
Sbjct: 56 KLNVRDFGAVGDGKTKDTLALQQTLDRCSLL---GGGEVFVPAGEYLTGALVLRSNTLLR 112
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
L A + + D ++PL GR G Y+ FI +++ I G+ G I G
Sbjct: 113 LDGDASLLGSPDVADYPLTQ---VRWEGRWIKG--YIGFISAMDAENIGIVGK-GKIVGN 166
Query: 158 GAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL 217
AI + +R F P L+EF++ R++ + + + W+IHP YC N+ + VT+
Sbjct: 167 TAIKGRV--ERATQFRNPALLEFVSCRNVRVEDCFTSQNDMWSIHPTYCENITFKNVTVH 224
Query: 218 APADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTG 277
+ A DGID DS +V I+ T DD +++KSG E G P+ + I T
Sbjct: 225 SGA-----DGIDVDSCKHVVIDGCDFDTHDDCISLKSGRGEEGYTILRPTEDVQISNCTF 279
Query: 278 SSPF-SGIAVGSETSGGVENVLAEHINLYNVGV-GIHVKTNIGRGGFIRNITVSDVYMEN 335
F + I +GSETSGG+ NV H I++K+ GRG FI +I+++D+ +
Sbjct: 280 MDHFWACIGIGSETSGGIRNVRVNHCKCLGARTFAIYIKSRPGRGAFIEDISMNDLEVSG 339
Query: 336 ARKGIKIAGDVGDHPDDKF---NPNALPVV-----NGITIKD----VWGTKVQQSGLIQG 383
A++G + D+F +P + + I + D V G + S ++G
Sbjct: 340 AKQGFLRFNILDSGKQDEFPVPGEEGIPTIRNFHFSNIRVTDMPVLVDGVGIHPSKPLEG 399
Query: 384 LKNSPFTGICLSNINLQG----------VAGPTSPPLKCSDVSGS 418
+ TG C I+L V G T P L +V+G+
Sbjct: 400 FSLTNVTGTCGKGISLANIKHAVVRDIKVTGFTGPLLSAHNVTGT 444
>gi|375148498|ref|YP_005010939.1| glycoside hydrolase family protein [Niastella koreensis GR20-10]
gi|361062544|gb|AEW01536.1| glycoside hydrolase family 28 [Niastella koreensis GR20-10]
Length = 547
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 128/480 (26%), Positives = 196/480 (40%), Gaps = 81/480 (16%)
Query: 9 SILLSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHL 68
+ +L C S S I P ++ D IT +G V DG+ LNT+A AI
Sbjct: 8 AAVLGLMACSSGLSAQKLPVIQPTSFKKDSTWITKYGAVADGQMLNTQAINAAI---DAC 64
Query: 69 RRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRER 128
+ GG ++ VP G++ TG L S++ L+L KGAV++ T+D + L+ G
Sbjct: 65 NKKGGGVVVVPAGLWATGPITLKSNVNLHLKKGAVLQFTKDFNQYQLVE-----GNWEGI 119
Query: 129 PGGRYMSFIHGDGLQDVVITGENGTIDGQGAIW------------WNMW----------- 165
P R S + ++ ITG G IDG G W W W
Sbjct: 120 PQMRNQSPVSATNATNIAITG-FGVIDGGGEAWRQVRKEKLTESQWKEWVAGGGVVSEDG 178
Query: 166 -----------------------------RQRTLPFTRPNLIEFMNSRSIIISNVIFQNS 196
+ F RPNLI + +++ V FQNS
Sbjct: 179 KSWYPSEQWLKAAKMKNPGEFTPDKTPEFYKSIKDFLRPNLIVLTKCKKVLLEGVTFQNS 238
Query: 197 PFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGW 256
W +HP+ ++ +R VT+ P + N DGID +S + V IE+S GDD + +KSG
Sbjct: 239 AAWCLHPLMSEDLTVRNVTVKNPWFAQNGDGIDVESCNRVLIENSSFDVGDDGLCMKSGR 298
Query: 257 DEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTN 316
DE G G P+ + IR G +GSE SGG N+ + +G+ KT
Sbjct: 299 DEAGRKRGMPTENVIIRDCKVYHAHGGFVIGSEMSGGARNIWVNNCTFIGTDIGLRFKTT 358
Query: 317 IGRGGFIRNITVSDVYMEN-------------ARKGIKIAGDVGDHPDDKFNP--NALPV 361
GRGG + NI +D+ M + + + +AG+ + P + P P
Sbjct: 359 RGRGGIVENIYCNDIQMIDIPGEAILFDMYYMSVDPVALAGEKRELPKVEKLPVDEGTPQ 418
Query: 362 VNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQ 421
+K+V + ++G+ + L N LQ G + C + SG ++
Sbjct: 419 FRNFVVKNVVCNGAAKGIFLRGIPEMHVKDVLLENCILQARKG-----IDCQEASGITFK 473
>gi|423312702|ref|ZP_17290639.1| hypothetical protein HMPREF1058_01251 [Bacteroides vulgatus
CL09T03C04]
gi|392687436|gb|EIY80729.1| hypothetical protein HMPREF1058_01251 [Bacteroides vulgatus
CL09T03C04]
Length = 468
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 185/385 (48%), Gaps = 52/385 (13%)
Query: 40 SITDFGGV--GDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+I DFG +G+ L +A AI ++GG + VPPG +LTG L S++ L+
Sbjct: 48 NIKDFGAKEGNNGEILCHEAINLAILTCS---QTGGGTVLVPPGEFLTGPITLKSNVNLH 104
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
L +GA +K + + + L P R I+ G ++ ITG+ G IDGQ
Sbjct: 105 LEEGAYLKFSSEKY---LYTP-TVLTRWEGVDCYNLHPLIYAYGESNIGITGK-GIIDGQ 159
Query: 158 GAI--WWNM-------WRQ-------------------------RTLPFT---RPNLIEF 180
+ WW+M W++ R + F RP LI
Sbjct: 160 ASNDNWWSMCGAPHYGWKEGMTAQKNGGRDKLLMYAETFAPIDKRQMTFEDGLRPQLINL 219
Query: 181 MNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIED 240
+I+I NV +NSPFW IHP++C ++ +R V + + PN+DG DP+SS NV IE+
Sbjct: 220 YRCNTILIENVTLKNSPFWVIHPLFCESLTVRGVKV--SSHGPNSDGCDPESSKNVLIEN 277
Query: 241 SYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAE 300
TGDD +A+KSG + G + PS I +R G+ VGSE SGG +N+ E
Sbjct: 278 CIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCEMKDGHGGVVVGSEISGGYKNLFVE 337
Query: 301 HINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNA 358
+ + N+ I +KTN RGG I NI V +V + R+ + + ++ +K + +
Sbjct: 338 NCKMDSPNLERVIRIKTNNCRGGVIENIYVRNVEVGECREAV-LKINLQYENREKCDRSF 396
Query: 359 LPVVNGITIKDVWGTKVQQSGLIQG 383
PVV + + +V K + LI G
Sbjct: 397 PPVVRHVYLDNVTSEKSKYGVLITG 421
>gi|408369543|ref|ZP_11167324.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
gi|407745289|gb|EKF56855.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
Length = 466
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 132/448 (29%), Positives = 209/448 (46%), Gaps = 61/448 (13%)
Query: 21 ASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPP 80
A ++ S VP ND SI D+G VGDG T NT+A ++A IQ +GG + +P
Sbjct: 32 ADLIIESITVPEFPDND-FSIMDYGAVGDGTTDNTQAIKDA---IQACVEAGGGKVVIPA 87
Query: 81 GVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGD 140
G +LTG +L S++ L+L K + + T+D + L SY G E Y I+
Sbjct: 88 GKFLTGPIHLKSNVNLHLEKNSEVIFTKDKQAY-LPVVRTSY-EGVELM--NYSPLIYAY 143
Query: 141 GLQDVVITGENGTIDGQGAI--WW---------------------NMWRQRTL-----PF 172
+++ +TG +GT +GQ WW N+ R R + P
Sbjct: 144 QQKNIAVTG-SGTFNGQAGKENWWPWSGAERYGHKKGDPHQRDSINLPRLRKMNEDATPV 202
Query: 173 T----------RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS 222
+ RP E S +++I V F N+PFW +HP+ C+NV + V ++ +
Sbjct: 203 SERIFGEGHHLRPTFFEPFESENVLIKGVTFINAPFWVMHPIKCTNVTVDGVKVI--SHG 260
Query: 223 PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS 282
PN DG +P+ S NV I + TGDD +A+KSG ++ G G S I +
Sbjct: 261 PNNDGCNPEYSKNVHITNCVFDTGDDCIAIKSGRNDEGRRVGIVSENIVVENCIMKDGHG 320
Query: 283 GIAVGSETSGGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG- 339
G+ +GSE S GV NV + + N+ I +KTN RGGF+ N+ V D+ + ++
Sbjct: 321 GVVMGSEISAGVRNVYVRNCKMDSPNLDRAIRIKTNTLRGGFVENVFVKDIQVGQVKEAF 380
Query: 340 IKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSG-LIQGLKNSPFTGICLSNIN 398
+KI + D +P + I I++V + G LIQG + +P + N+
Sbjct: 381 LKINTYYAIY--DNQEGEHIPTIKNIHIENVTVEDGGKYGILIQGREENPVKNVTFKNVT 438
Query: 399 LQGVAGP----TSPPLKCSD--VSGSAY 420
++ P S P++ ++ + G Y
Sbjct: 439 IKKAEMPMRVENSEPIEFTNTTIGGQKY 466
>gi|371778396|ref|ZP_09484718.1| glycoside hydrolase [Anaerophaga sp. HS1]
Length = 572
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 163/350 (46%), Gaps = 68/350 (19%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+SI DFG VGDG T N++AF +AI ++ GG + VP G++LTG + S++ L++
Sbjct: 63 VSIVDFGAVGDGVTDNSEAFAKAI---DYVSEKGGGRVIVPRGIWLTGPIIMKSNIDLHV 119
Query: 99 AKGAVIKATQDTWNWPLIAP----LPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
+GAV++ + D ++PLI L ++ R MS IH L+++ TG+ G
Sbjct: 120 QQGAVVRFSPDFEDYPLIETIFEGLNTF---------RCMSPIHAHNLENIAFTGK-GIF 169
Query: 155 DGQGAIW---------WNMWR--------------------------------------- 166
DG G W + W+
Sbjct: 170 DGNGDAWRPVKKSKLTESQWKKLVNSGGVLSDDGQIWYPSEKSKAGDSRDNFNVPDLERK 229
Query: 167 ---QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 223
++ F RP ++ + +++ FQNSP WNIHP+ C +V IR +T+ P S
Sbjct: 230 EDFEKIKDFLRPVMVSIKECKRVLLDGPTFQNSPAWNIHPLLCEDVTIRNLTVRNPWYSQ 289
Query: 224 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 283
N DG+D +S NV I ++ GDD + KSG DE G P+ + ++ G
Sbjct: 290 NGDGLDLESCKNVVIYNNSFDVGDDAICFKSGKDEDGRKRAVPTENVVVKNNVVYHGHGG 349
Query: 284 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
+GSE SGGV NV + VG+ K+ GRGG + NI +S++ M
Sbjct: 350 FVIGSEMSGGVRNVHVSNCTFIGTDVGLRFKSTRGRGGVVENIYISNIDM 399
>gi|197105922|ref|YP_002131299.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
gi|196479342|gb|ACG78870.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
Length = 470
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/420 (29%), Positives = 198/420 (47%), Gaps = 56/420 (13%)
Query: 29 IVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSF 88
I P + + ITDFG G+ +++AF AI +GG + VPPG +LTG
Sbjct: 38 IRPPIFPDRDFPITDFGADGEAVADSSEAFARAIAACHA---AGGGRVVVPPGWWLTGPI 94
Query: 89 NLTSHMTLYLAKGAVIKATQDTWNW-PLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVI 147
+L S++ L++ KGA I D + PL+ + R Y F++ +++ +
Sbjct: 95 HLKSNVNLHVQKGATILFKTDPKAYLPLV-----FTRWEGVELMNYSPFVYAFEQENIAV 149
Query: 148 TGENGTIDGQGAI--WWNM---WRQRT------LP------------------------- 171
TGE G +DGQ + WW W+Q +P
Sbjct: 150 TGE-GVLDGQCSREHWWTWKGPWKQNQHGWAEGMPNQRPARARLFQMAEDRTPVEQRVFG 208
Query: 172 ---FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGI 228
+ RP I+ +++I V + SPFW +HPV C NV IR + I + PN DGI
Sbjct: 209 EGSYLRPPFIQPYRCTNVLIEGVSLRRSPFWQVHPVLCRNVTIRRLDI--NSHGPNNDGI 266
Query: 229 DPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 288
DP+S +V IED + STGDD +A+ SG +E G G P + IR + G+ +GS
Sbjct: 267 DPESCDHVLIEDCFFSTGDDCIALNSGRNEDGRRVGVPCQNVVIRGCRMADGHGGLTIGS 326
Query: 289 ETSGGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV 346
+ SG V NV AE+ L ++ I K N RGG + + ++ + R+ + V
Sbjct: 327 QISGHVRNVFAENCRLDSPDLDHAIRFKNNALRGGIVERVRYRNLEVGQVRRAVVT---V 383
Query: 347 GDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPT 406
+ ++ N PV+ + I++V + +++ +QGL +P I + + + +GVA P+
Sbjct: 384 DFNYEEGANGRFKPVLRDVLIENVRSGRSRRAVDLQGLPGAPARDIRIVDCDFRGVAEPS 443
>gi|372223095|ref|ZP_09501516.1| glycoside hydrolase family protein [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 472
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/454 (27%), Positives = 213/454 (46%), Gaps = 72/454 (15%)
Query: 5 LVTLSILLSYFNCFSLASVV------------TCSGIVPMRYRNDKISITDFGGVGDGKT 52
L+ L +L +F+C + V + I +++N + ++ D+G V DG
Sbjct: 9 LMVLMAVLLFFSCAEKKTAVDDWAVNWAKRDSIVANIQLPKFKNQEFNVMDYGAVADGSV 68
Query: 53 LNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWN 112
LNT+A EA I+ +GG + +P G Y+TG +L ++ L +A+GA + T D
Sbjct: 69 LNTEAIAEA---IKACNAAGGGKVVLPAGKYVTGPIHLLDNVNLEIAEGAEVLFTTDKSL 125
Query: 113 WPLIAPLPSYGRGRERPGGRYMSF---IHGDGLQDVVITGENGTIDGQG--AIWW----- 162
+PL SY G M+F I+ +++ ITG+ G ++GQ WW
Sbjct: 126 FPLAH--TSY------EGTELMNFSPLIYAKDKKNIAITGK-GVLNGQANNGNWWPWCGN 176
Query: 163 --------------------NMWRQRTLP----------FTRPNLIEFMNSRSIIISNVI 192
++ +P F RP IE +++I ++
Sbjct: 177 TKYGWAEGDPKQHSSLKKLKEDMSEKGVPVADRIFGMGEFLRPTFIEPFGCENVLIKDIT 236
Query: 193 FQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAV 252
N+PFW +HP+ +NVV+ +T+ + PN DG DP+ + NV I++ +TGDD +A+
Sbjct: 237 IINAPFWVVHPIKSNNVVVDGITV--DSHGPNNDGCDPEYAKNVWIKNCVFNTGDDCIAI 294
Query: 253 KSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLY--NVGVG 310
KSG +E G PS I + G+ +GSE S GV NV ++ + N+
Sbjct: 295 KSGRNEDGRRVNIPSENIVVEDCKMIDGHGGVVMGSEISAGVRNVFVQNCQMDSPNLDRA 354
Query: 311 IHVKTNIGRGGFIRNITVSDVYMENARKGI-KIAGDVGDHPDDKFNPNALPVVNGITIKD 369
I +KTN RGGF+ N+ V ++ + ++ + KI G + K + +P V+ + +++
Sbjct: 355 IRIKTNTKRGGFVENVYVRNINVGQVKEAVLKINLHYGIYGVQK--GSFMPKVSNVYLEN 412
Query: 370 VWGTKVQQSG-LIQGLKNSPFTGICLSNINLQGV 402
+ + G L+ G + SP + L N+ ++ V
Sbjct: 413 IAVDNGGKYGVLVNGYEESPVKNVFLKNVTIKKV 446
>gi|147772320|emb|CAN69072.1| hypothetical protein VITISV_012807 [Vitis vinifera]
Length = 111
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/108 (72%), Positives = 84/108 (77%)
Query: 333 MENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGI 392
ME AR GIKIAGDVGDHPDD FNPNALPVV G+ I+DVWG V Q G I GLKNSPFTGI
Sbjct: 1 MEKARTGIKIAGDVGDHPDDNFNPNALPVVKGVVIRDVWGLDVLQPGSIIGLKNSPFTGI 60
Query: 393 CLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACS 440
CLS INL G P + P KCSDVSG+A V PWPCSEL+S QTG+CS
Sbjct: 61 CLSKINLHGKIKPGTAPWKCSDVSGAAVGVSPWPCSELTSPGQTGSCS 108
>gi|386819253|ref|ZP_10106469.1| endopolygalacturonase [Joostella marina DSM 19592]
gi|386424359|gb|EIJ38189.1| endopolygalacturonase [Joostella marina DSM 19592]
Length = 468
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 132/478 (27%), Positives = 220/478 (46%), Gaps = 76/478 (15%)
Query: 4 FLVTLSILLSYFNCFSLASVVTC----------SGIVPMRYRNDKISITDFGGVGDGKTL 53
++L ++ + F+C + T S IV + + +I D+G V DG+T
Sbjct: 6 LFLSLIVIFTCFSCKEESKKATAELQDPADKIISQIVVPNFPDKNFNIKDYGAVNDGETN 65
Query: 54 NTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNW 113
N+KA ++AI + +GG + VP G Y+TG +L S++ +L +GA I T+D +
Sbjct: 66 NSKAIKDAI---KACNDAGGGKVIVPKGKYVTGPIHLLSNVNFHLEEGAEILFTKDKKAY 122
Query: 114 -PLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAI--WW-------- 162
P++ SY G E Y I+ +++ +TG+ GT +GQ WW
Sbjct: 123 LPVVH--TSY-EGVELMN--YSPLIYAYKQKNIAVTGK-GTFNGQAGKDNWWPWCGAERY 176
Query: 163 -------------NMWRQRTL-----PFT----------RPNLIEFMNSRSIIISNVIFQ 194
N+ R R + P RP E +I++ +V F
Sbjct: 177 GHIEGEPQQKDSVNLPRLRKMNEAGTPVAERVFGEGYQLRPTFFEPFECENILVKDVTFT 236
Query: 195 NSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKS 254
N+PFW +HP+ N+ + VT+ + PN DG DP+ S NV I++ TGDD +A+KS
Sbjct: 237 NAPFWVMHPIKSVNITVDGVTVR--SHGPNNDGCDPEYSKNVHIKNCLFDTGDDCIAIKS 294
Query: 255 GWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLY--NVGVGIH 312
G ++ G PS I + G+ +GSE S GV NV + + N+ I
Sbjct: 295 GRNDDGRRVNIPSENIVVENCEMKDGHGGVVMGSEISAGVRNVYVRNCKMDSPNLDRAIR 354
Query: 313 VKTNIGRGGFIRNITVSDVYMENARKG-IKIAGDVGDHPDDKFNPNALPVVNGITIKDVW 371
+KTN RGGF+ N+ V ++ + ++ +K+ G + + + + +P + I I+DV
Sbjct: 355 IKTNTLRGGFVENVFVKNIEVGQVKEAFLKVNTHYGIYANQE--GDYMPSIKNIHIEDV- 411
Query: 372 GTKVQQSG----LIQGLKNSPFTGICLSNINLQGVAGPT----SPPLKCSDVSGSAYQ 421
KV G L++G + P I N+ + A P S P++ ++ S + Q
Sbjct: 412 --KVDNGGKYGILVRGREALPVKNITFKNVVINKAATPMLIEHSEPIQFTNTSINGKQ 467
>gi|423232717|ref|ZP_17219117.1| hypothetical protein HMPREF1063_04937 [Bacteroides dorei
CL02T00C15]
gi|423247409|ref|ZP_17228459.1| hypothetical protein HMPREF1064_04665 [Bacteroides dorei
CL02T12C06]
gi|392623156|gb|EIY17261.1| hypothetical protein HMPREF1063_04937 [Bacteroides dorei
CL02T00C15]
gi|392632549|gb|EIY26508.1| hypothetical protein HMPREF1064_04665 [Bacteroides dorei
CL02T12C06]
Length = 468
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/385 (30%), Positives = 184/385 (47%), Gaps = 52/385 (13%)
Query: 40 SITDFGGV--GDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+I DFG +G+ +A AI ++GG + VPPG +LTG L S++ L+
Sbjct: 48 NIKDFGAKEGNNGEIFCHEAINLAILTCS---QAGGGTVLVPPGEFLTGPITLKSNVNLH 104
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
L +GA +K + + + L P R I+ G ++ ITG+ G IDGQ
Sbjct: 105 LEEGAYLKFSSEKY---LYTP-TVLTRWEGVDCYNLHPLIYAYGESNIAITGK-GIIDGQ 159
Query: 158 GAI--WWNM-------WRQ-------------------------RTLPFT---RPNLIEF 180
+ WW+M W++ R + F RP LI
Sbjct: 160 ASNDNWWSMCGAPHYGWKEGMTAQKNGGRNKLLMYAKTFAPIDKRQMTFEDGLRPQLINL 219
Query: 181 MNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIED 240
+I+I NV +NSPFW IHP++C ++ +R V + + PN+DG DP+SS NV IE+
Sbjct: 220 YRCNTILIENVTLKNSPFWVIHPLFCESLTVRGVKV--SSHGPNSDGCDPESSKNVLIEN 277
Query: 241 SYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAE 300
TGDD +A+KSG + G + PS I +R G+ VGSE SGG +N+ E
Sbjct: 278 CIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCEMKDGHGGVVVGSEISGGYKNLFVE 337
Query: 301 HINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNA 358
+ + N+ I +KTN RGG I NI V ++ + R+ + + ++ +K + +
Sbjct: 338 NCKMDSPNLERVIRIKTNNCRGGVIENIYVRNIEVGECREAV-LKINLQYENREKCDRSF 396
Query: 359 LPVVNGITIKDVWGTKVQQSGLIQG 383
PVV + + +V K + LI G
Sbjct: 397 PPVVRHVYLDNVTSEKSKYGVLITG 421
>gi|379720205|ref|YP_005312336.1| hypothetical protein PM3016_2299 [Paenibacillus mucilaginosus 3016]
gi|378568877|gb|AFC29187.1| hypothetical protein PM3016_2299 [Paenibacillus mucilaginosus 3016]
Length = 518
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 129/410 (31%), Positives = 192/410 (46%), Gaps = 41/410 (10%)
Query: 30 VPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFN 89
V R + D+ IT+FG V DG+T+NT+A + AI + G + VP G ++TG+
Sbjct: 92 VSTRGQADRFDITEFGAVADGQTINTEAIQAAIDAC-----TAGGKVVVPKGTFVTGAIF 146
Query: 90 LTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIH----GDG-LQD 144
L S MTLY+ +G V+ + + ++P+ + GRE+ Y S I+ +G L+
Sbjct: 147 LKSRMTLYVEQGGVLLGSDNPDDYPV---MQYRWEGREQLC--YASLINTKDPAEGRLEQ 201
Query: 145 VVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPV 204
++I GE G ID G ++ F R + N + + ++ + SP W +H +
Sbjct: 202 IIIEGE-GKIDANGMALFHKEMAEKKGF-RGRAVCLRNVDGVYLKDITVRQSPAWCVHLI 259
Query: 205 YCSNVVIRYVTILAPADSP--------NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGW 256
YC+ V + +V I D N DG++PDS+S+V I +S I++ DD +A+KSG
Sbjct: 260 YCNGVSVNHVEIHTKKDERGRRYEHIFNGDGLNPDSTSDVYIFNSMIASQDDCIAIKSGR 319
Query: 257 DEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTN 316
+E G G PS I I S F G+A GSE SGGV NV +V +K
Sbjct: 320 NEEGRRVGIPSQNIRISNCIFKSGF-GVATGSEMSGGVRNVRISDCRFEDVYSIATIKAP 378
Query: 317 IGRGGFIRNITVSDVYMENA----------RKGIKIAG--DVGDHPDDKFNP--NALPVV 362
GRG I N+TV D + N R I I D DK V+
Sbjct: 379 RGRGAVIENVTVEDCTLTNYSLEHEDCRWFRGAINIDQFYSHADFDADKVEEVDEGTSVI 438
Query: 363 NGITIKD-VWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLK 411
I +K+ V T + + GL SP I L N+N G G + +K
Sbjct: 439 RNIHLKNIVLDTHAGNAVFMAGLPESPLQNIRLENVNALGKYGLKAYNIK 488
>gi|325570664|ref|ZP_08146390.1| polygalacturonase [Enterococcus casseliflavus ATCC 12755]
gi|325156510|gb|EGC68690.1| polygalacturonase [Enterococcus casseliflavus ATCC 12755]
Length = 438
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 160/302 (52%), Gaps = 16/302 (5%)
Query: 36 NDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMT 95
N +++ D G + L T+A +E +I L + GG + G Y TG+ L S++
Sbjct: 2 NIQLTTADLQG---KEGLLTEAIQE---KIDELHQQGGGRITFSAGRYPTGALFLKSNIE 55
Query: 96 LYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTID 155
L+L GA + + D ++P++ S G +R Y S ++ + +++ +TG G +D
Sbjct: 56 LHLLLGATLVFSDDPKDYPVVV---SRWEGVKRE--VYASCLYAENAENIAVTGL-GMLD 109
Query: 156 GQGAIWWNMWRQ--RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRY 213
GQG WW +R+ L + RP LI F + + I + ++ +SP W ++P+ C N+ I
Sbjct: 110 GQGQRWWKTFRENREQLAYPRPKLISFDSCQQITLKDIRLVDSPSWTVNPILCQNLTIDN 169
Query: 214 VTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIR 273
+ I PADSPNTDGIDP+S NV I + +I GDD +A+KSG ++ ITI
Sbjct: 170 LRIKNPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKSGTEDTKERVA--CENITIV 227
Query: 274 RVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
+ +GSE SG + NV + + G+ +K+ GRGG I +I V+++ M
Sbjct: 228 NCHMLHGHGAVVLGSEMSGDIRNVTISNCIFQDTDRGVRLKSRRGRGGTIEDIRVNNIVM 287
Query: 334 EN 335
+N
Sbjct: 288 DN 289
>gi|212693826|ref|ZP_03301954.1| hypothetical protein BACDOR_03347 [Bacteroides dorei DSM 17855]
gi|237709356|ref|ZP_04539837.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|265755031|ref|ZP_06089945.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|423242200|ref|ZP_17223310.1| hypothetical protein HMPREF1065_03933 [Bacteroides dorei
CL03T12C01]
gi|212663715|gb|EEB24289.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|229456741|gb|EEO62462.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|263234642|gb|EEZ20221.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|392639944|gb|EIY33752.1| hypothetical protein HMPREF1065_03933 [Bacteroides dorei
CL03T12C01]
Length = 468
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/385 (30%), Positives = 184/385 (47%), Gaps = 52/385 (13%)
Query: 40 SITDFGGV--GDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+I DFG +G+ +A AI ++GG + VPPG +LTG L S++ L+
Sbjct: 48 NIKDFGAKEGNNGEIFCHEAINLAILTCS---QAGGGTVLVPPGEFLTGPITLKSNVNLH 104
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
L +GA +K + + + L P R I+ G ++ ITG+ G IDGQ
Sbjct: 105 LEEGAYLKFSSEKY---LYTP-TVLTRWEGVDCYNLHPLIYAYGESNIAITGK-GIIDGQ 159
Query: 158 GAI--WWNM-------WRQ-------------------------RTLPFT---RPNLIEF 180
+ WW+M W++ R + F RP LI
Sbjct: 160 ASNDNWWSMCGAPHYGWKEGMTAQKNGGRNKLLMYAETFAPIDKRQMTFEDGLRPQLINL 219
Query: 181 MNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIED 240
+I+I NV +NSPFW IHP++C ++ +R V + + PN+DG DP+SS NV IE+
Sbjct: 220 YRCNTILIENVTLKNSPFWVIHPLFCESLTVRGVKV--SSHGPNSDGCDPESSKNVLIEN 277
Query: 241 SYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAE 300
TGDD +A+KSG + G + PS I +R G+ VGSE SGG +N+ E
Sbjct: 278 CIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCEMKDGHGGVVVGSEISGGYKNLFVE 337
Query: 301 HINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNA 358
+ + N+ I +KTN RGG I NI V ++ + R+ + + ++ +K + +
Sbjct: 338 NCKMDSPNLERVIRIKTNNCRGGVIENIYVRNIEVGECREAV-LKINLQYENREKCDRSF 396
Query: 359 LPVVNGITIKDVWGTKVQQSGLIQG 383
PVV + + +V K + LI G
Sbjct: 397 PPVVRHVYLDNVTSEKSKYGVLITG 421
>gi|291514459|emb|CBK63669.1| Endopolygalacturonase [Alistipes shahii WAL 8301]
Length = 555
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 129/443 (29%), Positives = 184/443 (41%), Gaps = 87/443 (19%)
Query: 36 NDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMT 95
++ +S+ DFGG GDG TLNT AF +AI + GG + VP GV+ TG L +
Sbjct: 44 SNTVSVADFGGSGDGHTLNTAAFADAIAALAA---RGGGRVVVPEGVWYTGPIELKDNTE 100
Query: 96 LYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTID 155
L+L + AVI + D +PL+ + G R S I G+++V ITG G ID
Sbjct: 101 LHLEQNAVIVFSDDKTLYPLVE---TTFEGLNTL--RCQSPISARGVKNVAITGR-GVID 154
Query: 156 GQGAIW--------------------------------------------------WNMW 165
G G W W
Sbjct: 155 GNGDAWRAVKQDKLNPRQWKTLVRSGGVLSDDGKTWYPSESYKFGATSGADQNVSTWAKT 214
Query: 166 R---QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS 222
R +R F RP +I + ++++ VIFQNSP WNIHP C+N+++ +T+ P +
Sbjct: 215 RADFERMHDFLRPVMIAVHHCENVLLEGVIFQNSPCWNIHPAMCTNLIVNDITVRCPDYA 274
Query: 223 PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS 282
N DGID +S NV + +S GDD + +KSG D+ G G P I +
Sbjct: 275 QNGDGIDIESCRNVVLTNSRFDVGDDGICIKSGKDKAGRDRGIPCENILVDNCIVFHGHG 334
Query: 283 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN------- 335
G VGSE SGGV NV + VG+ K+ GRGG + NI + D+ M N
Sbjct: 335 GFVVGSEMSGGVRNVRVSNCTFSGTDVGLRFKSARGRGGVVENIWIEDIAMNNILQEPLL 394
Query: 336 --------------ARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLI 381
A G D+ P D+ P I I++VW +++
Sbjct: 395 FDLFYGGKSASEAHAEGGDAEVTDIAPKPVDE----TTPAFRDIHIRNVWCRGARRAMYF 450
Query: 382 QGLKNSPFTGICLSNINLQGVAG 404
GL + + N + V G
Sbjct: 451 NGLPEMNVERVTVENTQIYAVTG 473
>gi|192362237|ref|YP_001980696.1| polygalacturonase pga28A [Cellvibrio japonicus Ueda107]
gi|190688402|gb|ACE86080.1| polygalacturonase, putative, pga28A [Cellvibrio japonicus Ueda107]
Length = 489
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 128/438 (29%), Positives = 193/438 (44%), Gaps = 67/438 (15%)
Query: 12 LSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRS 71
+SY + A + + I + N I +G G TKAF AI +
Sbjct: 46 MSYDEAWRTADDIR-NNIARTSFPNKTFDIRAYGARAGGAIDATKAFANAIAACHA---A 101
Query: 72 GGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGG 131
GG + V G YL+G +L S++ L++ KGA I D + + + + G E G
Sbjct: 102 GGGKVLVSGGTYLSGPIHLLSNVNLHVEKGARIAFITDPKAY--LPAVFTRWEGMELMG- 158
Query: 132 RYMSFIHGDGLQDVVITGENGTIDGQG--AIWW----NMWR------------------- 166
Y I+ +++ ITGE GT+DGQ WW W+
Sbjct: 159 -YSPLIYAYRQENIAITGE-GTLDGQANRTTWWPWKGGAWKGGKNWSVPGFPTQDEGREQ 216
Query: 167 -QRTLPF--------------TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVI 211
QR + RP ++ ++I V NSPFW ++PV C++V++
Sbjct: 217 LQRAMEAGVAPEQRLFAEGANLRPPFVQPYECERVLIEGVTIVNSPFWLLNPVLCNDVIV 276
Query: 212 RYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGIT 271
R VT + PN+DG DP+S V IED Y TGDD +A+KSG + G PS I
Sbjct: 277 RGVT--CDSMGPNSDGCDPESCDRVLIEDCYFDTGDDCIAIKSGRNHDGRRINRPSQNIV 334
Query: 272 IRRVTGSSPFSGIAVGSETSGGVENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVS 329
IR G+ +GSE SGGV NV EH +N ++ G+ +KTN RGG + N
Sbjct: 335 IRNCHMRRGHGGVVIGSEMSGGVRNVFVEHCEMNSPDLERGLRIKTNSVRGGVVENFFAR 394
Query: 330 DVYMENARKGIKI-----AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGL 384
D+ + + I I GD G+H P+V I + + K ++ ++G
Sbjct: 395 DITIVEVKNAIVIDFQYEEGDAGEH---------TPIVRNIDFRGITCAKAERVFQVRGY 445
Query: 385 KNSPFTGICLSNINLQGV 402
+ SP + + L N + + V
Sbjct: 446 ERSPISNLALRNCDFKQV 463
>gi|345513234|ref|ZP_08792756.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|229437148|gb|EEO47225.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
Length = 468
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/385 (30%), Positives = 184/385 (47%), Gaps = 52/385 (13%)
Query: 40 SITDFGGV--GDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+I DFG +G+ +A AI ++GG + VPPG +LTG L S++ L+
Sbjct: 48 NIKDFGAKEGNNGEIFCHEAINLAILTCS---QAGGGTVLVPPGEFLTGPITLKSNVNLH 104
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
L +GA +K + + + L P R I+ G ++ ITG+ G IDGQ
Sbjct: 105 LEEGAYLKFSSEKY---LYTP-TVLTRWEGVDCYNLHPLIYAYGESNIAITGK-GIIDGQ 159
Query: 158 GAI--WWNM-------WRQ-------------------------RTLPFT---RPNLIEF 180
+ WW+M W++ R + F RP LI
Sbjct: 160 ASNDNWWSMCGAPHYGWKEGMTAQKNGGRNKLLMYAETFAPIDKRQMTFEDGLRPQLINL 219
Query: 181 MNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIED 240
+I+I NV +NSPFW IHP++C ++ +R V + + PN+DG DP+SS NV IE+
Sbjct: 220 YRCNTILIENVTLKNSPFWVIHPLFCESLTVRGVKV--SSHGPNSDGCDPESSKNVLIEN 277
Query: 241 SYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAE 300
TGDD +A+KSG + G + PS I +R G+ VGSE SGG +N+ E
Sbjct: 278 CIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCEMKDGHGGVVVGSEISGGYKNLFVE 337
Query: 301 HINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNA 358
+ + N+ I +KTN RGG I NI V ++ + R+ + + ++ +K + +
Sbjct: 338 NCKMDSPNLERIIRIKTNNCRGGVIENIYVRNIEVGECREAV-LKINLQYENREKCDRSF 396
Query: 359 LPVVNGITIKDVWGTKVQQSGLIQG 383
PVV + + +V K + LI G
Sbjct: 397 PPVVRHVYLDNVTSEKSKYGVLITG 421
>gi|325106104|ref|YP_004275758.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974952|gb|ADY53936.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 1277
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/356 (30%), Positives = 180/356 (50%), Gaps = 39/356 (10%)
Query: 71 SGGTLLYVPPGVY-LTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPS-YGRGRER 128
GG + VPPG Y + G S++ LYL++GA + + D ++ LP+ R
Sbjct: 78 EGGGQVTVPPGKYFIKGPIIFKSNVNLYLSEGAELIFSHDEKDY-----LPAVLTRWEGT 132
Query: 129 PGGRYMSFIHGDGLQDVVITGENGTIDGQG---------------AIWWNMWRQRTLPFT 173
Y I+ ++++ ITG+ G ++GQG A+ M R+ +
Sbjct: 133 EVFNYSPLIYAYQVENIAITGK-GILNGQGSKNIANWKPEQKKDQALIRKMGREGAPVYN 191
Query: 174 ---------RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 224
RP IE +N R+I+I V ++ FW IHP+ C+NV +R V+I + + N
Sbjct: 192 RLFGEKHKLRPAFIEPLNCRNILIEGVRIIDATFWVIHPIGCNNVTVRNVSI--DSFNAN 249
Query: 225 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 284
+DG DP+S++N +E+ + TGDD +A+KSG D+ G G P+ I +R T S SG+
Sbjct: 250 SDGFDPESTTNALVENCHFRTGDDGIAIKSGRDQDGWRIGQPTENIIVRNSTFESLASGV 309
Query: 285 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG 344
+GSE SGGV NV E+I + I+ K+N+ RGG++ N + +V M++ I+
Sbjct: 310 CIGSEISGGVRNVFIENIKIPKASNAIYFKSNLDRGGYMENTWIRNVNMDSVGTAIRFDP 369
Query: 345 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINL 399
D + N N TI+++ +SG+ + G K+ P T + L N+ +
Sbjct: 370 DYKSESKE----NYATRFNNFTIENINCAYASRSGIEVNGFKDMPITNVALKNVRI 421
>gi|389574386|ref|ZP_10164450.1| glycoside hydrolase [Bacillus sp. M 2-6]
gi|388425994|gb|EIL83815.1| glycoside hydrolase [Bacillus sp. M 2-6]
Length = 463
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 127/415 (30%), Positives = 199/415 (47%), Gaps = 60/415 (14%)
Query: 33 RYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTS 92
++ + + ++ +G G L+T A + AI L+ GG +L +P G +LTG+ L S
Sbjct: 48 KFPDREFNVIHYGADNKGIELSTNAIQSAIDDAHRLK--GGRVL-IPEGTFLTGALELKS 104
Query: 93 HMTLYLAKGAVIKATQDTWNW-PLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGEN 151
++ L+L + A + +QDT ++ PL+ L Y G E Y I+ +++ ITG
Sbjct: 105 NVELHLHENAYVSFSQDTRDYLPLV--LTRY-EGIELYN--YSPLIYAHHAENIAITGA- 158
Query: 152 GTIDGQG--AIWW----------NMWRQRTLPFT-------------------RPNLIEF 180
GT+DG+G WW + R R L F R + I+
Sbjct: 159 GTLDGRGDEHHWWPWKYGTNGQPSQDRDRQLLFEMAEKRIPVEERVFGEGHYLRSSFIQP 218
Query: 181 MNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIED 240
N ++I+I V ++SP W +HPV NV++R V I+ PNTDG++P+S +V IED
Sbjct: 219 YNCQNILIEGVTVKDSPMWQVHPVLSENVIVRGVNIIGHG--PNTDGVNPESCRHVLIED 276
Query: 241 SYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAE 300
Y GDD +A+KSG +E G G PS I IRR T G+ +GSE SGGV+ V AE
Sbjct: 277 CYFDNGDDCIAIKSGRNEDGRRIGVPSENIVIRRNTMRDGHGGVTIGSEISGGVKYVYAE 336
Query: 301 H--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI------AGDVGDHPDD 352
++ N+ + +KTN RGG I +I + +++ + + GD G H
Sbjct: 337 DNVMDSPNLDRALRIKTNSVRGGTIEHIYFKNNLVKSLKHEVVCIDMMYEEGDAGPH--- 393
Query: 353 KFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTS 407
PVV I ++ + + + I +SP T + + + V P S
Sbjct: 394 ------RPVVRHIEVEGLKSSGGRYGVKIAAYSHSPVTHFKMKDCVIDDVTYPLS 442
>gi|308185704|ref|YP_003929835.1| polygalacturonase [Pantoea vagans C9-1]
gi|308056214|gb|ADO08386.1| Putative polygalacturonase precursor [Pantoea vagans C9-1]
Length = 352
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/317 (34%), Positives = 163/317 (51%), Gaps = 32/317 (10%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+I+I DF V D +L+T+A + AI S G + +P G +LTG+ L S MTL
Sbjct: 3 RINIIDFAAVPDATSLSTQAIQRAIDSA-----SAGDTVLIPAGRFLTGALFLKSEMTLE 57
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
LAK AV+ +Q ++P I P G P + ++ + ++V + G +GT+DGQ
Sbjct: 58 LAKDAVLLGSQRLEDYPDI-PTRVAGIDMVWPA----AMLNINHCRNVTVCG-SGTLDGQ 111
Query: 158 GAIWWNM-------------WRQRTLPFT------RPNLIEFMNSRSIIISNVIFQNSPF 198
GA+WW+ + +R L + RP + S + + + Q+S F
Sbjct: 112 GAVWWHKFWGDDETSGMLADYTRRGLRWVVDYDCRRPRNVVVYESECVTLEDFTSQDSGF 171
Query: 199 WNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDE 258
WN+H Y V ++ + ++ A P+TDGID DSS V +E +S DD + VKSG
Sbjct: 172 WNLHVCYSKQVNLQRLRVM-NATGPSTDGIDIDSSQLVRVEGCTVSCNDDNICVKSGRGA 230
Query: 259 YGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIG 318
G + I IR T SGI +GSETSGG+ENV+ EH GVG +K+
Sbjct: 231 EAQQLGRTARDIIIRDCTLLKG-SGITLGSETSGGIENVIIEHNRFSGTGVGFRIKSARN 289
Query: 319 RGGFIRNITVSDVYMEN 335
RGG+I+NI V + ME+
Sbjct: 290 RGGWIKNIVVRHLKMED 306
>gi|325106423|ref|YP_004276077.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975271|gb|ADY54255.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 482
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 120/423 (28%), Positives = 197/423 (46%), Gaps = 64/423 (15%)
Query: 29 IVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSF 88
IV ++ ITD+G D +T+A R+AI + +GG + VP G +L+G
Sbjct: 45 IVAPTFKKVDYKITDYGASLDSTVKSTEAIRKAI---EACHTNGGGRVIVPKGTFLSGPI 101
Query: 89 NLTSHMTLYLAKGAVIKATQDTWNW-PLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVI 147
+L S++ L+L GA I ++D ++ PL+ + R Y I+ +++ I
Sbjct: 102 HLKSNVNLHLEDGAKILFSRDVNDYKPLV-----FSRWEGMECMNYSPLIYAYEQENIAI 156
Query: 148 TGENGTIDGQG--AIWWNMWRQRT-------LP--------------------------- 171
TG NG +DG WW W+ + +P
Sbjct: 157 TG-NGILDGNANNEYWW-PWKAKKEYGWKEGIPNQLAAVKILTQQVKDLVPARERIHGDG 214
Query: 172 -FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 230
+ RP I+ S++++I++V N+PFWNI+PV C NV +R V ++ PN DG DP
Sbjct: 215 SYLRPPFIQPYLSKNVLIADVKIINAPFWNINPVLCENVTVRNVKVV--THGPNNDGCDP 272
Query: 231 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 290
+S NV I Y TGDD +A+KSG +E G P+ I G+ +GSE
Sbjct: 273 ESCKNVLITGCYFDTGDDCIAIKSGRNEDGRNIARPAENHIIENCEMKDGHGGVVIGSEI 332
Query: 291 SGGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGD 348
SGG N+ A+++ + N+ + +KT+ RGG I N+ + +V + ++ + +
Sbjct: 333 SGGARNIFAQNLIMDSPNLDRILRLKTSSLRGGIIENVYMRNVEVGTYKEAAILCDMFYE 392
Query: 349 HPDDKFNPNALPVVNGITIKDVWGTKVQQSG----LIQGLKNSPFTGICLSNINLQGVAG 404
P D LP + I+++++ ++Q G LI K SP + +SN + GV
Sbjct: 393 KPGD-----FLPTIRNISVENL---NIKQGGKFGVLINAYKESPVENLRISNSTINGVKI 444
Query: 405 PTS 407
P
Sbjct: 445 PVQ 447
>gi|170288299|ref|YP_001738537.1| glycoside hydrolase family protein [Thermotoga sp. RQ2]
gi|170175802|gb|ACB08854.1| glycoside hydrolase family 28 [Thermotoga sp. RQ2]
Length = 446
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 125/408 (30%), Positives = 195/408 (47%), Gaps = 66/408 (16%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
++++ DFG GD +T +++F+ AI + L + GG L VP GV+LTG +L S++ L+
Sbjct: 25 EVNLLDFGARGDERTDCSESFKRAI---EELSKQGGGRLIVPEGVFLTGPIHLKSNIELH 81
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
+ IK D + L L + G E Y ++ ++V ITG +G +DG
Sbjct: 82 VK--GTIKFIPDPERY-LPVVLTKF-EGIELYN--YSPLVYALDCKNVAITG-SGVLDGS 134
Query: 158 G--AIWWNMWR-------------------------QRTLP----------FTRPNLIEF 180
WW W+ +R P + RP+ ++F
Sbjct: 135 ADNEHWWP-WKGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEERVFGKGHYLRPSFVQF 193
Query: 181 MNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIED 240
R++++ +V NSP W +HPV NV+IR + I + PN DGIDP+S + IE
Sbjct: 194 YRCRNVLVEDVKIINSPMWCVHPVLSENVIIRNIEI--SSTGPNNDGIDPESCKYMLIEK 251
Query: 241 SYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR--VTGSSPFSGIAVGSETSGGVENVL 298
TGDD V +KSG D G G PS I +R V + G+ +GSE SGGV NV+
Sbjct: 252 CRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVV 311
Query: 299 AEHINLYNVGVGIHVKTNIGRGGFIRNITVSD-----VYMENARKGIKIAGDVGDHPDDK 353
A + NV + +KTN RGG++ NI D V E R ++ + G++
Sbjct: 312 ARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRYDNEEGEY---- 367
Query: 354 FNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 401
LPVV + +K++ T + + I+GL+N I +S+ ++G
Sbjct: 368 -----LPVVRSVFVKNLKATGGKYALRIEGLENDYVKDIMISDTIMEG 410
>gi|397691340|ref|YP_006528594.1| exo-poly-alpha-D-galacturonosidase [Melioribacter roseus P3M]
gi|395812832|gb|AFN75581.1| exo-poly-alpha-D-galacturonosidase [Melioribacter roseus P3M]
Length = 495
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 187/414 (45%), Gaps = 78/414 (18%)
Query: 52 TLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTW 111
T NT A +AI +GG + VP G++LTG + S++ L+L KGA+I+ T++
Sbjct: 2 TKNTDAINKAI---AACSENGGGKVIVPAGIWLTGPIEMKSNVNLFLEKGAMIQFTKNFD 58
Query: 112 NWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIW---------- 161
++PL+ L +Y G E+ R S I G L+++ ITG G IDG G W
Sbjct: 59 DYPLV--LTTY-EGTEQY--RCQSPISGWNLENIAITGY-GVIDGGGDAWRYVKKSKLTE 112
Query: 162 --W-------------NMW--------RQRTLP-------------------FTRPNLIE 179
W N W QR L + RP ++
Sbjct: 113 SQWKKLVSSGGVVDKKNQWWPSEQAMNGQRILDSLLEANGELTKEDYRKVRDYLRPVMVN 172
Query: 180 FMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIE 239
+ ++I++ V FQNSP WNIHP+ N++++ VT+ P S N DGID +S NV I
Sbjct: 173 LVKCKNILLEGVTFQNSPAWNIHPLMSENIILKNVTVRNPWYSQNGDGIDVESCKNVVIY 232
Query: 240 DSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLA 299
D GDD + +KSG +E+G G P+ + I G +GSE SGGV N+
Sbjct: 233 DCKFDVGDDAICMKSGKNEFGRKRGIPTENVIIADCIVYHGHGGFTIGSEMSGGVRNIKV 292
Query: 300 EHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENA----------------RKGIKIA 343
+ N +G+ K+ GRGG + NI + ++YM++ + I +A
Sbjct: 293 TNCNFIGTDIGLRFKSTRGRGGVVENIYIDNIYMKDIPTEALSFNMYYGGQAPTEDIPLA 352
Query: 344 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNI 397
+ + + P I + D++ + + +IQGL I L+N+
Sbjct: 353 EKLKNRKVLNVDETT-PQFRNIFLNDIYCIGAEDAVIIQGLPEMKIKNIVLNNV 405
>gi|257876852|ref|ZP_05656505.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC20]
gi|257811018|gb|EEV39838.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC20]
Length = 438
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 95/285 (33%), Positives = 153/285 (53%), Gaps = 13/285 (4%)
Query: 53 LNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWN 112
L T+A +E +I L + GG + G Y TG+ L S++ L+L GA + + D +
Sbjct: 16 LLTEAIQE---KIDELHQQGGGRITFSAGRYPTGALFLKSNIELHLLLGATLVFSDDPKD 72
Query: 113 WPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQ--RTL 170
+P++ S G +R Y S ++ + +++ +TG G +DGQG WW +R+ L
Sbjct: 73 YPVVV---SRWEGVKRE--VYASCLYAENAENIAVTGL-GMLDGQGQRWWKTFRENREQL 126
Query: 171 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 230
+ RP LI F + + I + ++ +SP W ++P+ C ++ I + I PADSPNTDGIDP
Sbjct: 127 AYPRPKLISFDSCQQITLKDIRLVDSPSWTVNPILCQDLTIDNLRIKNPADSPNTDGIDP 186
Query: 231 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 290
+S NV I + +I GDD +A+KSG ++ ITI + +GSE
Sbjct: 187 ESCKNVRISNCHIDVGDDCIAIKSGTEDTKERVA--CENITIVNCHMLHGHGAVVLGSEM 244
Query: 291 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 335
SG + NV + + GI +K+ GRGG I +I V+++ M+N
Sbjct: 245 SGDIRNVTISNCIFQDTDRGIRLKSRRGRGGTIEDIRVNNIVMDN 289
>gi|257867957|ref|ZP_05647610.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC30]
gi|257874287|ref|ZP_05653940.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC10]
gi|257802040|gb|EEV30943.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC30]
gi|257808451|gb|EEV37273.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC10]
Length = 438
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 95/285 (33%), Positives = 153/285 (53%), Gaps = 13/285 (4%)
Query: 53 LNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWN 112
L T+A +E +I L + GG + G Y TG+ L S++ L+L GA + + D +
Sbjct: 16 LLTEAIQE---KIDELHQQGGGRITFSAGRYPTGALFLKSNIELHLLLGATLVFSDDPKD 72
Query: 113 WPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQ--RTL 170
+P++ S G +R Y S ++ + +++ +TG G +DGQG WW +R+ L
Sbjct: 73 YPVVV---SRWEGVKRE--VYASCLYAENAENIAVTGL-GMLDGQGQRWWKTFRENREQL 126
Query: 171 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 230
+ RP LI F + + I + ++ +SP W ++P+ C ++ I + I PADSPNTDGIDP
Sbjct: 127 AYPRPKLISFDSCQQITLKDIRLVDSPSWTVNPILCQDLTIDNLRIKNPADSPNTDGIDP 186
Query: 231 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 290
+S NV I + +I GDD +A+KSG ++ ITI + +GSE
Sbjct: 187 ESCKNVRISNCHIDVGDDCIAIKSGTEDTKERVA--CENITIVNCHMLHGHGAVVLGSEM 244
Query: 291 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 335
SG + NV + + GI +K+ GRGG I +I V+++ M+N
Sbjct: 245 SGDIRNVTISNCIFQDTDRGIRLKSRRGRGGTIEDIRVNNIVMDN 289
>gi|160880868|ref|YP_001559836.1| glycoside hydrolase family protein [Clostridium phytofermentans
ISDg]
gi|160429534|gb|ABX43097.1| glycoside hydrolase family 28 [Clostridium phytofermentans ISDg]
Length = 518
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 105/320 (32%), Positives = 157/320 (49%), Gaps = 21/320 (6%)
Query: 29 IVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSF 88
++ Y +++ +FG GDG +T + AI ++G L +P G Y +
Sbjct: 72 VIKTDYEFVTLNVKEFGAKGDGVHDDTTMIQCAI---NSCPKNGRVL--IPEGCYKISTL 126
Query: 89 NLTSHMTLYLAKGAVIKATQDTWNWPLI-APLPSYGRGRE--------RPGGRYMSFIHG 139
L S + L L +GAV+ A D +P++ + S+ E P + I G
Sbjct: 127 FLKSDLRLELGRGAVLSAFTDRSKFPILPGRIESFDETEEYNLGSWEGNPLDSFAGIITG 186
Query: 140 DGLQDVVITGENGTIDG--QGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSP 197
+ +V ITGE GTIDG WWN + R + + RP LI + +I + + +NSP
Sbjct: 187 INVSNVEITGE-GTIDGCADETNWWNNPKVRNIAW-RPRLIFLNHCNNITVQGITVKNSP 244
Query: 198 FWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWD 257
WNIHP + ++ +TIL P DSPNTDG+DP+S NV I Y S GDD +A+KSG
Sbjct: 245 CWNIHPYFSDDLKFVDLTILNPKDSPNTDGLDPESCKNVLIVGVYFSLGDDCIAIKSGKI 304
Query: 258 EYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNI 317
G + PS + IR+ I +GSE +GGV+N+ + G+ +KT
Sbjct: 305 YMGAKHKRPSENLEIRQCCMRDGHGSITIGSEMAGGVKNLTVRECLFIHTDRGLRIKTRR 364
Query: 318 GRGGFIRNITVSDVYMENAR 337
GRG ++ + V EN R
Sbjct: 365 GRG---KDAIIDGVLFENIR 381
>gi|182416092|ref|YP_001821158.1| glycoside hydrolase [Opitutus terrae PB90-1]
gi|177843306|gb|ACB77558.1| glycoside hydrolase family 28 [Opitutus terrae PB90-1]
Length = 543
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 125/423 (29%), Positives = 192/423 (45%), Gaps = 45/423 (10%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
I D G V GKT NT AF +AI +GG + VP G +LTG +L S++ L+LA
Sbjct: 55 DIRDHGAVPGGKTKNTAAFAQAIAACAE---AGGGRVLVPAGRWLTGPIHLRSNIELHLA 111
Query: 100 KGA-VIKATQDTWNWPLIAPLPSYGRGRERPGG----RYMSFIHGDGLQDVVITGENGTI 154
+ A VI + + P++ R GG Y FI+ +V ITG G +
Sbjct: 112 QDAEVIFSDRFEDYLPVVL---------VRVGGIELYNYSPFIYARDCTNVAITGP-GRL 161
Query: 155 DGQGAIWWNMWRQRT-----------LPFT-----------RPNLIEFMNSRSIIISNVI 192
+G WW W+ + +P RPN + F N R++++
Sbjct: 162 NGNSQRWW-AWKTKETKRIFRLAPDGVPVEQRIFGTPEAAIRPNFVVFFNCRNVLMEGFT 220
Query: 193 FQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAV 252
P W IHPVY N++IR V +L + PN DGIDPDS NV IE TGDD V +
Sbjct: 221 IGGGPNWTIHPVYSENIIIRRVHVLT--EGPNNDGIDPDSCRNVLIEHCVFDTGDDCVVL 278
Query: 253 KSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 312
KSG++E G P+ + +R + + G+ VGSE SG V NV + +
Sbjct: 279 KSGYNEDGWRVARPTENVVMRWCSSARGHGGLVVGSEMSGDVRNVYMHDCDFAGTDRAVR 338
Query: 313 VKTNIGRGGFIRNITVSDVYMENARKGIKIAG-DVGDHPDDKFNPNALPVVNGITIKDVW 371
+K+ GRGG + NI ++ + + ++ + I D G + F P+ I ++ V
Sbjct: 339 IKSRRGRGGVVENIWAENLRVRDMQQEVVILNMDYGADRNQAFTEKP-PLFRNIHVRRVT 397
Query: 372 GTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELS 431
+ I GL +SP + ++ +Q G + ++ + A + P EL+
Sbjct: 398 ADGAPAAIRIAGLADSPIEHVTFEDLTIQSTRGVIAQHVRGLTFANVAIGPRIGPVFELT 457
Query: 432 SSQ 434
+Q
Sbjct: 458 DAQ 460
>gi|284005877|ref|YP_003391696.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
gi|283821061|gb|ADB42897.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
Length = 390
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 122/377 (32%), Positives = 188/377 (49%), Gaps = 26/377 (6%)
Query: 47 VGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKA 106
+ DG T K+ ++ I +GG L VP G YL +L S + L LA GA + A
Sbjct: 23 LADGTTDQAKSLQQTI---DSCGATGGGTLIVPAGRYLISPISLCSRVNLQLASGATLLA 79
Query: 107 TQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWR 166
+ + ++ P + I+GD L DV +TG GTIDG GA+WW +
Sbjct: 80 STNAADYTPKLP----------------NLINGDSLTDVSLTGT-GTIDGNGAVWWQRFI 122
Query: 167 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 226
RP LI SR++ I + NSP +++ P C NV I+ +TI AP+DSPNTD
Sbjct: 123 DSGKTLNRPRLIYLTRSRNVTIDGLTLINSPSFHLVPSQCQNVTIQNLTITAPSDSPNTD 182
Query: 227 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 286
GIDP + ++V I++ I GDD +A+K G I P I IR G++V
Sbjct: 183 GIDPANCTHVLIQNCTIDNGDDNIAIKGGRSNGQIV--QPCQDIQIRNCRFLHGH-GLSV 239
Query: 287 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV 346
GSETS GV +V + GI +K+ G GG I+N++ S + M N + I
Sbjct: 240 GSETSSGVSSVSVTNCTFTGTTNGIRIKSQPGLGGAIQNLSYSQITMTNVTNPLIIDLAY 299
Query: 347 GDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPT 406
+ ++ + + +P V+G+TI + T + +G + GL NS + LSN+ + G
Sbjct: 300 SLNNNNGYASD-IPSVSGLTIDQLSVTGAKNAGSLVGLTNSLLQNLTLSNLQISAQTGLV 358
Query: 407 SPPLKCSDVSGSAYQVK 423
+ +++ SAY+++
Sbjct: 359 LQNAR--NITMSAYRIQ 373
>gi|386819250|ref|ZP_10106466.1| endopolygalacturonase [Joostella marina DSM 19592]
gi|386424356|gb|EIJ38186.1| endopolygalacturonase [Joostella marina DSM 19592]
Length = 569
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 193/437 (44%), Gaps = 78/437 (17%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+SI +G V G NT+A +AI + + GG + +P G++LTG L S++ L+L
Sbjct: 59 VSIEKYGAVAGGLEKNTQAIEKAISEVS---KKGGGTVKIPRGIWLTGPITLKSNINLHL 115
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
GA++ +++ ++PL + G R +S I+ ++++ ITG+ G IDG G
Sbjct: 116 EDGALLLFSKNFEDYPLT---DTSFEGLNTM--RCISPINAMNVENIAITGK-GVIDGNG 169
Query: 159 AIW-----------------------------W-------------------NMWRQRTL 170
W W N+ ++ L
Sbjct: 170 DAWRPVKKGKMTSKQWDNLVASGGVLSEDGKIWFPTKSSKKGFDSREYFNVPNLTKKEDL 229
Query: 171 P----FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 226
F RP ++ +N +++ FQNSP WNIHP+ NV+IR + + P S N D
Sbjct: 230 ESVKDFLRPVMVSIVNCNKVLLDGPTFQNSPAWNIHPLMSENVIIRNLKVRNPWYSQNGD 289
Query: 227 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 286
G+D +S NV I ++ GDD + +KSG D+ G G P+ + ++ T G +
Sbjct: 290 GLDLESCKNVLIYNNTFDVGDDAICIKSGKDKDGRDRGIPTENVIVKNNTVYHAHGGFVI 349
Query: 287 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENA-RKGIKIAGD 345
GSE SGGV+N+ + N VG+ K+ GRGG + NI +SD+ M N + I+
Sbjct: 350 GSEMSGGVKNINVSNCNFIGTDVGLRFKSTRGRGGVVENIYISDINMINIPTEAIRFNMF 409
Query: 346 V-GDHPDDKFNPNA---------------LPVVNGITIKDVWGTKVQQSGLIQGLKNSPF 389
G+ P + N NA PV I +K++ T ++ GL
Sbjct: 410 YSGNAPILEENQNAEDEQRDEQKVAVTEETPVFKNIYMKNIIATNSGKAAFFMGLPEKSL 469
Query: 390 TGICLSNINLQGVAGPT 406
+ L N L+ G T
Sbjct: 470 ENVTLENAMLEADEGIT 486
>gi|333897861|ref|YP_004471735.1| polygalacturonase [Thermoanaerobacterium xylanolyticum LX-11]
gi|333113126|gb|AEF18063.1| Polygalacturonase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 518
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 120/385 (31%), Positives = 179/385 (46%), Gaps = 36/385 (9%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
I++ DFG VGDGK L+T + + AI + G +Y P GVYLT L S++T+ L
Sbjct: 84 INVKDFGAVGDGKRLDTFSIQAAI-----MACPDGGRVYFPEGVYLTYPIFLKSNITIEL 138
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGG-----------RYMSFIHGDGLQDVVI 147
KGAV+ + +P+ LP +E G + S I G +++V I
Sbjct: 139 GKGAVLLGAKGREMYPI---LPGEIDSQEFKNGYLGSWEGETNNMFASLITGISVENVNI 195
Query: 148 TGENGTIDGQGAI--WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVY 205
G+ G IDG + WW + + + + RP + ++++I + +NSP W IHP+
Sbjct: 196 IGD-GIIDGNSSFDTWWQDAKVKRIAW-RPRTVYLNKCKNVLIEGITIKNSPSWTIHPLM 253
Query: 206 CSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH 265
N+ + I P D+PNTDG+DP+S +V I + S GDD +A+KSG
Sbjct: 254 SQNLKFVNLNIENPKDAPNTDGLDPESCKDVLIVGTRFSVGDDCIAIKSGKLSVSQKLPM 313
Query: 266 PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG--GFI 323
PS + IR + +GSE SGGV+NV E+ GI +KT GRG G I
Sbjct: 314 PSENLIIRNCLMEYGHGAVVIGSEMSGGVKNVHVENCIFRKTDRGIRIKTRRGRGKTGVI 373
Query: 324 RNITVSDVYMENARKGIKIAG----DVGDHPDDKFNPNALPV------VNGITIKDVWGT 373
I S++ ME I D + ++ LPV V I +KD+
Sbjct: 374 DEIHASNIRMEGVLTPFTINSFYFCDADGKTEYVWSKEKLPVDDRTPYVGNIYLKDITCI 433
Query: 374 KVQ-QSGLIQGLKNSPFTGICLSNI 397
Q +G + GL + + NI
Sbjct: 434 DTQVAAGYMYGLPERKIERVDMENI 458
>gi|393787524|ref|ZP_10375656.1| hypothetical protein HMPREF1068_01936 [Bacteroides nordii
CL02T12C05]
gi|392658759|gb|EIY52389.1| hypothetical protein HMPREF1068_01936 [Bacteroides nordii
CL02T12C05]
Length = 467
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 120/389 (30%), Positives = 185/389 (47%), Gaps = 55/389 (14%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYR-IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+ITDFG D +T + EAI + I +GG + VP G + TG L S++ +L
Sbjct: 49 NITDFGAKPDNET---EPCHEAINQAILKCSLAGGGTVVVPQGTFYTGPITLKSNVNFHL 105
Query: 99 AKGAVIK-ATQDTWNWP-LIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDG 156
+GA++K T + +P +I RP I+ G ++ ITG+ GTIDG
Sbjct: 106 QEGAILKFLTNQSLYFPGVITRWEGLDCYNARP------LIYAYGETNIAITGK-GTIDG 158
Query: 157 QGA--IWWNM-------W-----------RQRTLPF-----------------TRPNLIE 179
QG+ WW M W R+R L + RP LI
Sbjct: 159 QGSNETWWPMCGAPKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRIMTPEDGLRPQLIN 218
Query: 180 FMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIE 239
+++I +V NSPFW IHP++C ++++R V I PN DG DP+S NV IE
Sbjct: 219 LYACSTVLIEDVTLLNSPFWVIHPLFCESLIVRGVNIFNRG--PNGDGCDPESCKNVLIE 276
Query: 240 DSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLA 299
+ TGDD +A+KSG + G + PS I +R + G+ +GSE SGG N+
Sbjct: 277 NCTFDTGDDCIAIKSGRNADGRKWNIPSENIIVRNCKMKNGHGGVVIGSEISGGYRNLFV 336
Query: 300 EHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPN 357
E+ + N+ I +KT+ RGG I N+ V ++ + R+ + + ++ ++ N
Sbjct: 337 ENCQMDSPNLDRVIRIKTSTCRGGIIENVFVRNITVGQCREAV-LRINLQYENREQCNRG 395
Query: 358 ALPVVNGITIKDVWGTKVQQSGLIQGLKN 386
P V + +K+V K + LI GL +
Sbjct: 396 FTPTVRNVHLKNVTCQKSRLGVLIIGLDD 424
>gi|403252174|ref|ZP_10918484.1| exo-poly-alpha-D-galacturonosidase [Thermotoga sp. EMP]
gi|402812187|gb|EJX26666.1| exo-poly-alpha-D-galacturonosidase [Thermotoga sp. EMP]
Length = 446
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 123/404 (30%), Positives = 195/404 (48%), Gaps = 58/404 (14%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
++++ DFG GD +T +++F+ AI + L + GG L VP GV+LTG +L S++ L+
Sbjct: 25 EVNLLDFGARGDRRTDCSESFKRAI---EELSKQGGGRLIVPEGVFLTGPIHLKSNIELH 81
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
+ KG + P++ + G E Y ++ ++V ITG +G +DG
Sbjct: 82 V-KGTIKFIPDPERYLPVVL---TRFEGIELYN--YSPLVYALDCENVAITG-SGVLDGS 134
Query: 158 G--AIWWNMWR-------------------------QRTLP----------FTRPNLIEF 180
WW W+ +R P + RP+ ++F
Sbjct: 135 ADNEHWWP-WKGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEERVFGKGHYLRPSFVQF 193
Query: 181 MNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIED 240
R++++ V NSP W +HPV NV+IR + I + PN DGIDP+S + IE
Sbjct: 194 YRCRNVLVEGVKIINSPMWCVHPVLSENVIIRNIEI--SSTGPNNDGIDPESCKYMLIEK 251
Query: 241 SYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR--VTGSSPFSGIAVGSETSGGVENVL 298
TGDD V +KSG D G G PS I +R V + G+ +GSE SGGV NV+
Sbjct: 252 CRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVV 311
Query: 299 AEHINLYNVGVGIHVKTNIGRGGFIRNI-TVSDVYMENARKGIKIAGDVGDHPDDKFNPN 357
A + NV + +KTN RGG++ NI + +V M + + I+I + D
Sbjct: 312 ARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAMNVSEEVIRI-----NLRYDNEEGE 366
Query: 358 ALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 401
LPVV + +K++ T + + I+GL+N I +S+ ++G
Sbjct: 367 YLPVVRSVFVKNLKATGGKYAVRIEGLENDYVKDILISDTIIEG 410
>gi|304396605|ref|ZP_07378486.1| glycoside hydrolase family 28 [Pantoea sp. aB]
gi|304356114|gb|EFM20480.1| glycoside hydrolase family 28 [Pantoea sp. aB]
Length = 430
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 109/317 (34%), Positives = 162/317 (51%), Gaps = 32/317 (10%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+I+I DF V D +L+T+A + AI S G + +P G +LTG+ L S MTL
Sbjct: 3 RINIIDFAAVPDATSLSTQAIQRAIDSA-----SAGDTVLIPAGRFLTGALFLKSEMTLE 57
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
LAK A++ +Q ++P I P G P + ++ + ++V + G +GT DGQ
Sbjct: 58 LAKDAMLLGSQRLEDYPDI-PTRVAGIDMVWPA----AMLNINHCRNVTVCG-SGTFDGQ 111
Query: 158 GAIWWNM-------------WRQRTLPFT------RPNLIEFMNSRSIIISNVIFQNSPF 198
GA+WW+ + +R L + RP + S + + + Q+S F
Sbjct: 112 GAVWWHKFWGDDENSGMLADYTRRGLRWVVDYDCRRPRNVVVYESECVTLEDFTSQDSGF 171
Query: 199 WNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDE 258
WN+H Y V ++ + ++ A P+TDGID DSS V +E +S DD + VKSG
Sbjct: 172 WNLHVCYSKQVNLQRLRVMN-ATGPSTDGIDIDSSQLVRVESCTVSCNDDNICVKSGRGA 230
Query: 259 YGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIG 318
G + I IR T SGI +GSETSGG+ENV+ EH GVG +K+
Sbjct: 231 EAQQLGRTARDIIIRDCTLLKG-SGITLGSETSGGIENVIIEHNRFSGTGVGFRIKSARN 289
Query: 319 RGGFIRNITVSDVYMEN 335
RGG+I+NI V + ME+
Sbjct: 290 RGGWIKNIVVRHLKMED 306
>gi|420156232|ref|ZP_14663077.1| pectate lyase family protein [Clostridium sp. MSTE9]
gi|394757879|gb|EJF40876.1| pectate lyase family protein [Clostridium sp. MSTE9]
Length = 511
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 120/385 (31%), Positives = 175/385 (45%), Gaps = 37/385 (9%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
I I D+ GDG +T A AIY +++ P G YL L S + LYL
Sbjct: 80 IHIKDYNAAGDGIRNDTAAIHAAIYSA-----PPRSVVIFPRGEYLVEHLFLKSGVDLYL 134
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRE------------RPGGRYMSFIHGDGLQDVV 146
+GAV++ N +A + Y + + P + S I+G +Q V
Sbjct: 135 EEGAVLRQNP---NRDALAIVKGYQKSYDYTDAVINASWEGNPLDCFCSLIYGKDVQQVR 191
Query: 147 ITGENGTIDGQGAI--WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPV 204
I G+ GT++G G WWN +++ + RP + +N I + + QNS WNIHP+
Sbjct: 192 IYGD-GTLNGSGMEGGWWNEPKKKNRAY-RPRNVSLVNCSDITVCGLTSQNSAAWNIHPL 249
Query: 205 YCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYG 264
Y SN+ +TI + DSPNTDG++P+S NV I GDD +A+KSG +
Sbjct: 250 YSSNLAFYGLTIQSDPDSPNTDGLNPESCENVEIVGCRFQVGDDCIAIKSGKLFLSRRHL 309
Query: 265 HPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG--GF 322
PS IT+RR G+ +GSE S GV++VL ++ G +KT GRG
Sbjct: 310 RPSRKITVRRCLMEEGHGGVVIGSEISCGVQDVLVQNCLFRRTDRGFRIKTRRGRGSTSV 369
Query: 323 IRNITVSDVYMENARKGIKI----AGDVGDHPDDKFNPNALPV------VNGITIKDVWG 372
+ + S V ME I D H D ALPV V IT+ D+
Sbjct: 370 VDGVRFSHVKMEQVSHCFVINMFYHCDPDGHSDLVQCKEALPVGAETPAVQNITLSDICA 429
Query: 373 TKVQQSGL-IQGLKNSPFTGICLSN 396
++ S + + GL SP + + N
Sbjct: 430 DEIAGSAVFLYGLPESPIRNVTVKN 454
>gi|345299336|ref|YP_004828694.1| glycoside hydrolase family protein [Enterobacter asburiae LF7a]
gi|345093273|gb|AEN64909.1| glycoside hydrolase family 28 [Enterobacter asburiae LF7a]
Length = 430
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 125/405 (30%), Positives = 186/405 (45%), Gaps = 64/405 (15%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
++ DFG G+ ++T A + AI + H L +P G +LTGS L S MTL+L
Sbjct: 5 NVCDFGADPSGRQVSTAAIQRAIAKTGH-----NDTLVIPAGRFLTGSLFLKSGMTLHLE 59
Query: 100 KGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYM----SFIHGDGLQDVVITGENGTID 155
GA + +Q ++PLI R G M + I+ DV ITG GTID
Sbjct: 60 AGAQLLGSQSLDDYPLIDT---------RVAGIDMRWPAAIINIINCHDVSITG-GGTID 109
Query: 156 GQGAIWWNM-------------WRQRTLPFT------RPNLIEFMNSRSIIISNVIFQNS 196
GQG +WW + R L + RP I S I + + + S
Sbjct: 110 GQGLVWWQRFWGDDEQGGMLGDYSARGLRWVVDYDCQRPRNILVYESERITLRDFTSRES 169
Query: 197 PFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGW 256
FWN+H Y ++ + V I A P+TDGID DS V +E +S DD + +K+G
Sbjct: 170 GFWNVHLCYSRHITLDSVQISNSA-GPSTDGIDIDSCEQVRVERCVVSCNDDNICIKAGR 228
Query: 257 DEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTN 316
+ + + I IR T +S SGI +GSETSGG+E VL EH GVG +K+
Sbjct: 229 GQEAASKARSARDIVIRDCTPNSG-SGITLGSETSGGIERVLIEHNRFNGTGVGFRIKSA 287
Query: 317 IGRGGFIRNITVSDVYMENARKGIKIA------------GDVGDHP-------DDKFNPN 357
RGGFIR+I V + + + R + I GD+ D P DD
Sbjct: 288 RNRGGFIRDIKVRHLQLVDVRFPVMIQLNWFAQYSYGERGDLTDKPDHWRKLADDVQGEA 347
Query: 358 ALPVVNGITIKDVWGTKVQQS-----GLIQGLKNSPFTGICLSNI 397
L V+ +T++++ + + S I+G + P + + L+++
Sbjct: 348 GLTHVSNLTLENISARRSESSVFSRAFFIEGYPDRPVSALTLASV 392
>gi|311748289|ref|ZP_07722074.1| exo-poly-alpha-D-galacturonosidase [Algoriphagus sp. PR1]
gi|126576785|gb|EAZ81033.1| exo-poly-alpha-D-galacturonosidase [Algoriphagus sp. PR1]
Length = 557
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 126/459 (27%), Positives = 200/459 (43%), Gaps = 87/459 (18%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
SI ++G VGDG T N++AF+ AI + + GG + VP G++LTG L ++ L+L
Sbjct: 52 SIMEYGAVGDGLTNNSQAFKAAI---EEVSNQGGGKVLVPRGIWLTGPITLLDNVNLHLE 108
Query: 100 KGAVIKATQDTWNWPLIAP----LPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTID 155
G++I +++ +PL+ L ++ R +S I+ ++++ ITG NGTID
Sbjct: 109 DGSLITFSKNKDEYPLVETSFEGLNTF---------RCLSPINAYRVENIAITG-NGTID 158
Query: 156 GQGAIW------------WNM------------W-------------------------- 165
G G W WN W
Sbjct: 159 GSGEAWRAVKRSKMTDSQWNELVSSGGIVVGTNWFPSQSFLDGHNASSSFNVPDVTDRKE 218
Query: 166 RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNT 225
++ F RP ++ S+ +++ FQNSP WNIHP+ +V+IR +T+ P S N
Sbjct: 219 LEKMKDFLRPVMVSIRESKRVLLDGPTFQNSPAWNIHPLMSEDVIIRNLTVRNPWFSQNG 278
Query: 226 DGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIA 285
DG+D +S NV I ++ GDD + KSG D G G P+ + ++ G
Sbjct: 279 DGLDLESCKNVLIYNNTFDVGDDAICFKSGKDSDGRERGMPTENVIVKNNIVYHGHGGFT 338
Query: 286 VGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM-----ENARKGI 340
VGSE SGG++NV + VG+ K+ GRGG + NI +S + M E R +
Sbjct: 339 VGSEMSGGIKNVHVSNCTFMGTDVGLRFKSTRGRGGVVENIWISKINMINIPAEAIRFNM 398
Query: 341 KIAGDV-----GDHPDDKFNPNAL-------PVVNGITIKDVWGTKVQQSGLIQGLKNSP 388
+G+ + +D+ L P I +KD+ T + GL
Sbjct: 399 FYSGNAPVLEEDQNAEDEARKEELAPVTEETPSFRNIFMKDIQVTGSGVAAFFMGLPEMK 458
Query: 389 FTGICLSNINL---QGVAGPTSPPLKCSDVSGSAYQVKP 424
+ L N L +G+ + L+ +V+ S Q P
Sbjct: 459 LQNVKLENAVLNAEKGITAIDAAGLELMNVNISGTQEIP 497
>gi|423294951|ref|ZP_17273078.1| hypothetical protein HMPREF1070_01743 [Bacteroides ovatus
CL03T12C18]
gi|392674531|gb|EIY67977.1| hypothetical protein HMPREF1070_01743 [Bacteroides ovatus
CL03T12C18]
Length = 469
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 127/438 (28%), Positives = 198/438 (45%), Gaps = 64/438 (14%)
Query: 1 MFRFLVTLSILLSYFNCFSLASVVTCSGIVPMRYRNDK-----------ISITDFGGVGD 49
M R + L ++L + + A+ V + R +K ITDFG D
Sbjct: 1 MMRRTINLLLMLLFVAEVTFANTVDFDKVFKESARIEKQIKRTSFPKRTFLITDFGAKTD 60
Query: 50 GKTLNTKAFREAIYR-IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIK-AT 107
+ EAI + I SGG + VP G + TG L S++ +L +GAV+K +T
Sbjct: 61 DEA---NPCHEAINQAILQCSLSGGGTVIVPKGTFYTGPITLKSNVNFHLEEGAVLKFST 117
Query: 108 QDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAI--WWNM- 164
+ +P + R I+ G ++ ITG+ G IDGQG++ WW M
Sbjct: 118 DQSLYFPAVLT-----RWEGIDCYNAHPLIYAYGESNIAITGK-GIIDGQGSMETWWPMC 171
Query: 165 ------W-----------RQRTLPF-----------------TRPNLIEFMNSRSIIISN 190
W R+R L + RP L+ + +I+I
Sbjct: 172 GAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMKPEDGMRPQLLNLHSCHTILIEG 231
Query: 191 VIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLV 250
V NSPFW IHP++C ++++ VT+ PN DG DP+S NV IE+ TGDD +
Sbjct: 232 VTLLNSPFWVIHPLFCESLIVSGVTVFNRG--PNGDGCDPESCKNVLIENCTFDTGDDCI 289
Query: 251 AVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLY--NVG 308
A+KSG +E G + PS I +R + G+ +GSE SGG N+ E + N+
Sbjct: 290 AIKSGRNEDGRKWNIPSENIIVRGCMMRNGHGGVVIGSEISGGYRNLFVEDCRMDSPNLD 349
Query: 309 VGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIK 368
I +KT+ RGG I N+ V +V + R+ + + ++ +K P+V + +K
Sbjct: 350 RVIRIKTSTCRGGLIENVYVRNVTVGQCREAV-LRINLQYENREKCKRGFDPIVRNVHLK 408
Query: 369 DVWGTKVQQSGLIQGLKN 386
+V K + LI GL++
Sbjct: 409 NVTCEKSKLGVLIIGLED 426
>gi|395803704|ref|ZP_10482948.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434258|gb|EJG00208.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 451
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 120/399 (30%), Positives = 198/399 (49%), Gaps = 46/399 (11%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVY-LTGSFNLTSHMTL 96
+I+I G GD + N KAF +A+ + + +GGT++ VP G+Y + G + S++ L
Sbjct: 43 QINILKLGAKGDSVSDNKKAFDKAMALCK--KNNGGTII-VPKGIYKINGPIHFVSNVNL 99
Query: 97 YLAKGAVIKATQDTWNW-PLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTID 155
L KGA IK + + ++ P++ L S+ Y I+ + ++ I+GE GTID
Sbjct: 100 KLEKGAKIKFSDNPEDYLPMV--LTSWEGTMLY---NYSPLIYANNCTNIAISGE-GTID 153
Query: 156 GQGAIWWNMW---------RQRTLP---------------FTRPNLIEFMNSRSIIISNV 191
G+G W + R R + F RP +I+F+N ++I++ N+
Sbjct: 154 GEGGKTWKTFKAKENEGKNRSRDMNHNNTPLSERKFGEGYFLRPQMIQFLNCKNILVENI 213
Query: 192 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 251
+NSPFW +H + ++ IR ++ + + N DGIDP+ + +V IE+ GDD VA
Sbjct: 214 RIENSPFWCLHLLKSESITIRGISY--KSLNHNNDGIDPEYAKDVLIENVTFDNGDDNVA 271
Query: 252 VKSGWDEYGIA-YGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYN-VGV 309
+K+G D G A PS I IR G+ +GSE S GV+NV E+ +
Sbjct: 272 IKAGRDHEGRANTATPSQNIIIRNCNFKG-LHGVVIGSEMSAGVQNVFVENCKTAGYLKR 330
Query: 310 GIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKD 369
GI++KTN RGG+I+NI V ++ ++ + I + H + K V+ + +
Sbjct: 331 GIYLKTNADRGGYIKNIFVRNIQLDQVEDCLYITANY--HGEGK---GYQSDVSNVYFSN 385
Query: 370 VWGTKVQQSGL-IQGLKNSPFTGICLSNINLQGVAGPTS 407
+ K +SG+ IQG + I L NI ++ S
Sbjct: 386 ITCNKASESGIVIQGFADKKIKNISLKNIEIKEAKNALS 424
>gi|240144096|ref|ZP_04742697.1| putative polygalacturonase [Roseburia intestinalis L1-82]
gi|257203884|gb|EEV02169.1| putative polygalacturonase [Roseburia intestinalis L1-82]
gi|291536249|emb|CBL09361.1| Endopolygalacturonase [Roseburia intestinalis M50/1]
Length = 518
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 123/393 (31%), Positives = 176/393 (44%), Gaps = 31/393 (7%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+++ DFG GDGK +TK + AI R + +P G Y S L S++ L L
Sbjct: 83 LNVRDFGATGDGKQDDTKFIQAAILACPKESR-----VLIPKGSYRITSLFLKSNLRLEL 137
Query: 99 AKGAVIKATQDTWNWPLI-APLPSYGRGRE--------RPGGRYMSFIHGDGLQDVVITG 149
AKGA + A D +P + SY E P + I G +++V+I G
Sbjct: 138 AKGAELIADTDRAAYPKFPGMIESYDEQGEYNLGTWEGNPLPMFAGIITGLDVENVLIYG 197
Query: 150 ENGTIDGQGAI--WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCS 207
GTI+G + WW + F RP L + +++ + V F+NSP W +HP +
Sbjct: 198 R-GTINGNASKENWWKNPKVMVGAF-RPRLFFLSHCQNVTLCGVTFKNSPSWTLHPYFSD 255
Query: 208 NVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPS 267
N+ +TI P+DSPNTDG+DP+S NV I S GDD +AVKSG G Y PS
Sbjct: 256 NLKFYGLTINNPSDSPNTDGLDPESCKNVDIVGVKFSLGDDCIAVKSGKIYMGKKYRTPS 315
Query: 268 SGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG--GFIRN 325
I IR+ + + VGSE +GGV+N++ E Y+ G+ +KT GRG +
Sbjct: 316 ENIHIRQCLMENGHGAVTVGSEMAGGVKNLVVEECRFYDTDRGLRIKTRRGRGKDAVLDQ 375
Query: 326 ITVSDVYMENARKGIKIAGDVGDHPDDKF----NPNALPVVNG---ITIKDVWGTKVQQ- 377
I + M+ I PD K + +PV +G I D K Q
Sbjct: 376 IIFRKIDMDQVMTPFVINCFYFCDPDGKTEFVQSREKMPVDDGTPAILRLDFEDIKAQNC 435
Query: 378 ---SGLIQGLKNSPFTGICLSNINLQGVAGPTS 407
+ GL I + NI + P S
Sbjct: 436 HVAAAYFDGLPEQKIEQIIMKNITVTYAKNPKS 468
>gi|392950256|ref|ZP_10315813.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
gi|392434538|gb|EIW12505.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
Length = 427
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 117/361 (32%), Positives = 179/361 (49%), Gaps = 23/361 (6%)
Query: 65 IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGR 124
I + +GG L + GVY GS L S TL+L GAV+K + +T +P P+ S
Sbjct: 28 INDILEAGGGQLNLTAGVYEVGSLELGSDFTLFLEAGAVLKFSHETDVYP---PVESRWE 84
Query: 125 GRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRT--LPFTRPNLIEFMN 182
G + Y + ++G L+ V ITGE G +DGQG WW + ++ L + RP L +
Sbjct: 85 GATQT--VYRACLYGSHLKRVKITGE-GVVDGQGKKWWRRFDEKAAELEYPRPYLCSIEH 141
Query: 183 SRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSY 242
S ++I NV F NSP W +HP C NV I VT++ P +SPNTDG+DP+S N+ I +
Sbjct: 142 SEQVVIENVTFVNSPAWTLHPFDCENVAINNVTVVNPKNSPNTDGLDPESCRNIRIANCC 201
Query: 243 ISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHI 302
GDD +A+KSG ++ + I I G+ GSE SG + NV +
Sbjct: 202 FDVGDDCIAIKSGTEDASQSIA--CENIIISGCNMVHGHGGVVFGSEMSGDIRNVTISNC 259
Query: 303 NLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGD--VGDHPDDKF--NPNA 358
+ GI KT GRGG I I+V+++ M+N + I G ++ + A
Sbjct: 260 VFQDTDRGIRFKTRRGRGGRISGISVNNIVMDNVLCPLIINSYYFCGKRGNEAYVWTKEA 319
Query: 359 LPV------VNGITIKDVWGTKVQQ-SGLIQGLKNSPFTGICLSN--INLQGVAGPTSPP 409
LPV ++ ++ + T ++ +G I GL + + LS+ L + P +P
Sbjct: 320 LPVDERTPKLSNLSFSHLIATNIRSCAGFIYGLPEMAISNVTLSDARFELSKDSQPEAPA 379
Query: 410 L 410
+
Sbjct: 380 M 380
>gi|332715898|ref|YP_004443364.1| polygalacturonase-like protein [Agrobacterium sp. H13-3]
gi|325062583|gb|ADY66273.1| polygalacturonase-like protein [Agrobacterium sp. H13-3]
Length = 531
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 173/369 (46%), Gaps = 25/369 (6%)
Query: 50 GKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQD 109
G N +A EA+ + +GGTL + G++ L S MT +LA+GAV++A
Sbjct: 109 GARANARALEEAVAAVP----AGGTLQFAA-GLWTAFPVRLKSDMTFHLAEGAVLRAPST 163
Query: 110 TWNWPLIAPLPSYGRG----RERPGGRYMSFIHGDGLQDVVITGENGTIDGQG--AIWWN 163
WP++ GR P + + +H G ++VI G G +DG G WW+
Sbjct: 164 RNGWPILPARDETGRMLGSWEGLPDACFAAPVHAIGADNLVIEG-TGVLDGSGDRGDWWS 222
Query: 164 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 223
++ RP + ++ R++ + +N+P W +HP C + +TI AP +SP
Sbjct: 223 WPKETRDGARRPRGLHLVSCRNVGLFGFTIRNAPSWTVHPQGCETLKAAGLTISAPHNSP 282
Query: 224 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH--PSSGITIRRVTGSSPF 281
NTDG +P+S NV I S GDD +AVK+G H + G+++R
Sbjct: 283 NTDGFNPESCRNVTISGVRFSVGDDCIAVKAGKRGPNGEDDHLAETRGVSVRHCLMERGH 342
Query: 282 SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 341
G+ +GSE SGGV +V E ++ G+ +KT GRGG + NIT+ V ++ +
Sbjct: 343 GGLVIGSEMSGGVHDVTVEDCDMVGTDRGLRLKTRRGRGGSVSNITMRRVLLDGVHTALS 402
Query: 342 IAG----DVGDHP------DDKFNPNALPVVNGITIKDVWGTKV-QQSGLIQGLKNSPFT 390
D H D + P ++GIT++DV + +G+ GL +P
Sbjct: 403 ANAHYHCDADGHDGWVQSRDPAPVDDGTPFIDGITVEDVEIRHLAHAAGVFLGLPEAPIR 462
Query: 391 GICLSNINL 399
I + N+ +
Sbjct: 463 NIAIRNLTI 471
>gi|440760701|ref|ZP_20939804.1| Polygalacturonase [Pantoea agglomerans 299R]
gi|436425454|gb|ELP23188.1| Polygalacturonase [Pantoea agglomerans 299R]
Length = 430
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/317 (34%), Positives = 162/317 (51%), Gaps = 32/317 (10%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+I+I DF V D +L+T+A + AI S G + +P G +LTG+ L S MTL
Sbjct: 3 RINIIDFAAVPDATSLSTQAIQRAIDSA-----SAGDTVLIPAGRFLTGALFLKSEMTLE 57
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
LAK A++ +Q ++P I P G P + ++ + ++V + G +GT DGQ
Sbjct: 58 LAKDAMLLGSQRLEDYPDI-PTRVAGIDMVWPA----AMLNINHCRNVTVCG-SGTFDGQ 111
Query: 158 GAIWWNM-------------WRQRTLPFT------RPNLIEFMNSRSIIISNVIFQNSPF 198
GA+WW+ + +R L + RP + S + + + Q+S F
Sbjct: 112 GAVWWHKFWGDDENSGMLADYTRRGLRWVVDYDCRRPRNVVVYESECVTLEDFTSQDSGF 171
Query: 199 WNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDE 258
WN+H Y V ++ + ++ A P+TDGID D+S V +E +S DD + VKSG
Sbjct: 172 WNLHVCYSKQVNLQRLRVMN-ATGPSTDGIDIDTSQLVRVESCTVSCNDDNICVKSGRGA 230
Query: 259 YGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIG 318
G + I IR T SGI +GSETSGG+ENV+ EH GVG +K+
Sbjct: 231 EAQQLGRTARDIIIRDCTLLKG-SGITLGSETSGGIENVIIEHNRFSGTGVGFRIKSARN 289
Query: 319 RGGFIRNITVSDVYMEN 335
RGG+I+NI V + ME+
Sbjct: 290 RGGWIKNIVVRHLKMED 306
>gi|418409920|ref|ZP_12983231.1| polygalacturonase-like protein [Agrobacterium tumefaciens 5A]
gi|358003969|gb|EHJ96299.1| polygalacturonase-like protein [Agrobacterium tumefaciens 5A]
Length = 523
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 175/369 (47%), Gaps = 25/369 (6%)
Query: 50 GKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQD 109
G N +A EA+ + +GGTL + G++ L S MT +LA+GAV++A
Sbjct: 101 GARANARALEEAVAAVP----AGGTLRFAA-GLWTAFPVRLKSDMTFHLAEGAVLRAPST 155
Query: 110 TWNWPLIAPLPSYGRG----RERPGGRYMSFIHGDGLQDVVITGENGTIDGQG--AIWWN 163
WP++ GR P + + +H G ++VI G G +DG G WW+
Sbjct: 156 RNGWPILPARDETGRMLGSWEGLPDACFAAPVHAIGADNLVIEG-TGVLDGSGDRGDWWS 214
Query: 164 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 223
++ RP + ++ R++ + +N+P W +HP C + +TI AP +SP
Sbjct: 215 WPKETRDGARRPRGLHLVSCRNVGLFGFTIRNAPSWTVHPQGCETLKAAGLTISAPHNSP 274
Query: 224 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH--PSSGITIRRVTGSSPF 281
NTDG +P+S NV I S GDD +AVK+G H + G+++R
Sbjct: 275 NTDGFNPESCRNVTISGVRFSVGDDCIAVKAGKRGPNGEDDHLAETRGVSVRHCLMERGH 334
Query: 282 SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 341
G+ +GSE SGGV NV E ++ G+ +KT GRGG + N+T+ V ++ + +
Sbjct: 335 GGLVIGSEMSGGVHNVTVEDCDMVGTDRGLRLKTRRGRGGSVSNVTMRRVLLDGVQTALS 394
Query: 342 IAG----DVGDHPD--DKFNPNAL----PVVNGITIKDVWGTKV-QQSGLIQGLKNSPFT 390
D H +P + P ++GIT++DV + +G+ GL +P
Sbjct: 395 ANAHYHCDADGHDGWVQSRDPAPVDYGTPFIDGITVEDVEIRHLAHAAGVFLGLPEAPIR 454
Query: 391 GICLSNINL 399
I + N+ +
Sbjct: 455 NIAIRNLTI 463
>gi|332666314|ref|YP_004449102.1| polygalacturonase [Haliscomenobacter hydrossis DSM 1100]
gi|332335128|gb|AEE52229.1| Polygalacturonase [Haliscomenobacter hydrossis DSM 1100]
Length = 778
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 123/452 (27%), Positives = 195/452 (43%), Gaps = 79/452 (17%)
Query: 34 YRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSH 93
+R D SI +G DG TL+T A +A+ + H +GG ++ VP G +LTG L S+
Sbjct: 265 FRKDTFSIVRYGAKSDGITLSTPAINQAV-NLAH--EAGGGVVVVPSGFWLTGPIVLKSN 321
Query: 94 MTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGT 153
+ L++++GA+++ + ++PL+ + G + R + I ++ ITG G
Sbjct: 322 VNLHISQGALLQFSNKREDFPLVK---TTWEGED--AIRCQAPISAVEASNIAITG-TGI 375
Query: 154 IDGQGAIWWNM---------WRQ------------RT----------------------- 169
IDG G +W + W++ RT
Sbjct: 376 IDGAGQVWRQVKKDKLTEAQWKKLIASGGVLDEEKRTWYPSENALKGSKIQKPGSIAAGF 435
Query: 170 --------LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 221
F RPN++ +++ + FQNSP W IHP+ C ++ +R V + P
Sbjct: 436 NLNNCSEFKDFLRPNMVSLSRCTQVLLEGITFQNSPAWTIHPLLCEHITLRDVIVRNPWY 495
Query: 222 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 281
N D +D +S N +E TGDD + +KSG D G G P+ I +R T
Sbjct: 496 GQNNDALDLESCRNGLVEGCSFDTGDDGICIKSGRDAEGRKRGVPTENIIVRNCTVFHGH 555
Query: 282 SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN------ 335
G +GSE SGGV N+ N VG+ KT GRGG + NI V+D+ M N
Sbjct: 556 GGFVIGSEMSGGVRNLFVSDCNFLGTDVGLRFKTARGRGGIVENIYVTDINMTNIPGEAI 615
Query: 336 -------ARKGIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKN 386
A+ + + G+ P+ K P P IK++ + LI+GL
Sbjct: 616 LFDMYYMAKDPVSLNGEKNVLPEMKAEPLGEGTPQFRNFHIKNIVCQGAETGILIRGLPE 675
Query: 387 SPFTGICLSNINL---QGVAGPTSPPLKCSDV 415
P I + N N+ QG+ S ++ ++
Sbjct: 676 MPIKNISIENANITCNQGLVCVESENIRLKNI 707
>gi|255531066|ref|YP_003091438.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255344050|gb|ACU03376.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 554
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/442 (26%), Positives = 186/442 (42%), Gaps = 74/442 (16%)
Query: 29 IVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSF 88
I ++ D I+I +G DG TLNTK+ +AI + GG ++ +P G++LTG
Sbjct: 36 IAKTFFKKDTINILKYGAKNDGITLNTKSINQAI---TDCNKRGGGVVVIPEGLWLTGPI 92
Query: 89 NLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVIT 148
L S++ L+L K A+++ T+D +PL+ G P R S I Q++ IT
Sbjct: 93 ELKSNVNLHLKKNALLQFTKDMDQYPLVE-----GNWEGLPQMRNQSPIWASNQQNIAIT 147
Query: 149 --------GENGTIDGQGAIWWNMWRQ-------------------RTLP---------- 171
GE + + + + W+ ++L
Sbjct: 148 GYGIVDGGGEAWRMVKKDKLTESQWKSLLASGGVVGEDNKSWYPSAKSLKGAKMKNAGVI 207
Query: 172 --------------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL 217
F RPNL+ + +++ V FQNSP WN+HP+ ++ IR V
Sbjct: 208 TKDKDAAFYAEIKDFLRPNLLVLNRCKRVLLEGVTFQNSPAWNLHPLMSEDITIRNVYAK 267
Query: 218 APADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTG 277
P + N DG+D +S NV +E S GDD + +KSG D G P+ + IR T
Sbjct: 268 NPWYAQNGDGLDIESCKNVLVEGSTFDVGDDGICIKSGRDAEGRKRAMPTENVVIRHSTV 327
Query: 278 SSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-- 335
G +GSE SGG +N+ +G+ KT GRGG + NI ++ M++
Sbjct: 328 YHAHGGFVIGSEMSGGAKNIFISDCTFIGTDIGLRFKTTRGRGGVVENIYARNINMKDIP 387
Query: 336 -----------ARKGIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQ 382
A + + G+ + P + P PV I +V ++ I+
Sbjct: 388 GEAILFDMYYAAVDPVPLTGEKRETPKVELLPVTEETPVFRKFYISNVVCDGAAKAVFIR 447
Query: 383 GLKNSPFTGICLSNINLQGVAG 404
GL + I L N+ ++ G
Sbjct: 448 GLPEMSISDIFLDNLTIKAKEG 469
>gi|356565569|ref|XP_003551012.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 346
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/204 (44%), Positives = 109/204 (53%), Gaps = 43/204 (21%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R +TDFGGVGDGKT NTKAF+ AI + H GG LL VPPG +LTGSFNLTSH
Sbjct: 167 RKHSAVLTDFGGVGDGKTSNTKAFQYAISNLSHYASDGGALLVVPPGKWLTGSFNLTSHF 226
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL+L K A I +QD WP + LPSYGRGR+ P G YM
Sbjct: 227 TLFLQKEATILGSQDESEWPTLPVLPSYGRGRDAPDGPYM-------------------- 266
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
IE M I ISN+ NS +HP+Y S+++I+ +
Sbjct: 267 -----------------------IEIMFFDHIQISNLTLINSLSLFVHPIYSSDIIIQGL 303
Query: 215 TILAPADSPNTDGIDPDSSSNVCI 238
TILAP DSPNTDGID + S +V I
Sbjct: 304 TILAPIDSPNTDGIDLEDSVSVLI 327
>gi|390956451|ref|YP_006420208.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
gi|390411369|gb|AFL86873.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
Length = 423
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 128/441 (29%), Positives = 209/441 (47%), Gaps = 62/441 (14%)
Query: 9 SILLSYFNCFSLASVVTCSGIV-PMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQH 67
S++L+ F S A V + P Y G DGKT +T A ++AI +
Sbjct: 3 SVVLAAFAAVSFALPVAAQTVCDPHAY----------GAKADGKTKDTAAIQKAI---EI 49
Query: 68 LRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRE 127
GT++ + G +L+G L S +TL + KGA + ++D ++PL RE
Sbjct: 50 CAPKHGTVI-LKGGTFLSGPLTLRSDLTLEIDKGATLLGSRDIDDYPL----------RE 98
Query: 128 RPGGRYMSFIHGDGLQDVVITG---ENGTIDGQGAIWWNMWRQRTLP--------FTRPN 176
R ++ +H D + ++ +TG E G IDG G I+W M R +P + RP
Sbjct: 99 DAKWRRVALLHADHVSNLRVTGGKTEGGIIDGSGDIFWEMARTHRVPNDTSGSGGYPRPM 158
Query: 177 LIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS-PNTDGIDPDSSSN 235
L++ S+ + ++ QNSP +N+ +C + I + I PA + PNTDGIDP SS N
Sbjct: 159 LVDITESQHLTFDHITLQNSPMYNLTFFFCDGIKIDHTIIRNPAKTGPNTDGIDPFSSKN 218
Query: 236 VCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS---GIAVGSETSG 292
+ I I TGDD +A+KSG E G P + I S F G++VGSE +G
Sbjct: 219 IEISYVDIDTGDDDIALKSGLVERDPKIG-PVEHVYIH----DSIFRHGHGLSVGSELAG 273
Query: 293 GVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI---------A 343
G+ +V E+I + N G+ +K+N RG I ++ ++ M + I+I A
Sbjct: 274 GISDVRVENIVMENTDAGVRIKSNRTRGNDIHDLHYKNIQMTGVGQPIQITEYYPKWPAA 333
Query: 344 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 403
G D P + I+++++ T + + +I G+ P + L+ I++ G
Sbjct: 334 GTDTAKAVDAHTPR----FHDISLENITATGAKDA-IIIGIPEYPIQNLTLTKISISGEK 388
Query: 404 GPTSPPLKCSDVSGSAYQVKP 424
G ++ ++V+ VKP
Sbjct: 389 GLQ---IRNAEVTMQDVVVKP 406
>gi|312130362|ref|YP_003997702.1| glycoside hydrolase [Leadbetterella byssophila DSM 17132]
gi|311906908|gb|ADQ17349.1| glycoside hydrolase family 28 [Leadbetterella byssophila DSM 17132]
Length = 775
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/440 (26%), Positives = 195/440 (44%), Gaps = 78/440 (17%)
Query: 34 YRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSH 93
+R D +I +G DG T+NT A +AI + H +GG + +P GV++TG L S+
Sbjct: 263 FRKDTFNIVRYGAKADGFTVNTTAIAQAI-DLAH--EAGGGTVLIPAGVWVTGPLKLKSN 319
Query: 94 MTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGT 153
+ L+L KGA+++ + + ++P++ + G++ R + I G ++ ITG+ G
Sbjct: 320 VNLHLQKGALLQFSNNRDDYPIVE---TTWEGQK--ALRCHAPIWAVGQVNIAITGQ-GI 373
Query: 154 IDGQGAIW---------------------------------------------W-NMWRQ 167
+DG G +W W N+W +
Sbjct: 374 MDGSGEVWKQVKKNKLTSTQWRKLVESGGVVGKKGDAWYPSEQSRYGNEDVRDWANLWVE 433
Query: 168 -RTLP-------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP 219
+TL F RPN+I +++I V FQNSP W +HP+ ++ +R V + P
Sbjct: 434 GKTLEDYMTVKDFLRPNMISITECENVLIEGVTFQNSPAWTLHPLLSKHITLRNVNVRNP 493
Query: 220 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS 279
N D +D +S S ++ TGDD + +KSG DE G G P+ + I+ T
Sbjct: 494 WFGQNNDALDLESCSYAIVDGCTFDTGDDAITLKSGRDEQGRKRGVPTENVIIKNTTVFH 553
Query: 280 PFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN---- 335
G +GSE SGGV+NV ++ + +G+ KT RGG + NI +S++ M N
Sbjct: 554 GHGGFVIGSEMSGGVKNVFVDNCSFLGTDIGLRFKTKRDRGGVVENIYISNIAMNNIPGE 613
Query: 336 ---------ARKGIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGL 384
A+ + + GD P P P IK+V + +++GL
Sbjct: 614 AILFDMYYEAKDPVPLDGDSHALPVIAPQPVNEGTPQFKNFYIKNVVSHGAVSAIVLRGL 673
Query: 385 KNSPFTGICLSNINLQGVAG 404
P GI + + + + G
Sbjct: 674 PEMPIRGIKIEDSHFKSDKG 693
>gi|291538883|emb|CBL11994.1| Endopolygalacturonase [Roseburia intestinalis XB6B4]
Length = 518
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 123/393 (31%), Positives = 176/393 (44%), Gaps = 31/393 (7%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+++ DFG GDGK +TK + AI R + +P G Y S L S++ L L
Sbjct: 83 LNVRDFGATGDGKQDDTKFIQAAILACPKESR-----VLIPKGSYRITSLFLKSNLRLEL 137
Query: 99 AKGAVIKATQDTWNWPLI-APLPSYGRGRE--------RPGGRYMSFIHGDGLQDVVITG 149
AKGA + A D +P + SY E P + I G +++V+I G
Sbjct: 138 AKGAELIADTDRAVYPKFPGMIESYDEQGEYNLGTWEGNPLPMFAGIITGLDVENVLIYG 197
Query: 150 ENGTIDGQGAI--WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCS 207
GTI+G + WW + F RP L + +++ + V F+NSP W +HP +
Sbjct: 198 R-GTINGNASKENWWKNPKVMVGAF-RPRLFFLSHCQNVTLCGVTFKNSPSWTLHPYFSD 255
Query: 208 NVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPS 267
N+ +TI P+DSPNTDG+DP+S NV I S GDD +AVKSG G Y PS
Sbjct: 256 NLKFYGLTINNPSDSPNTDGLDPESCKNVDIVGVKFSLGDDCIAVKSGKIYMGKKYRTPS 315
Query: 268 SGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG--GFIRN 325
I IR+ + + VGSE +GGV+N++ E Y+ G+ +KT GRG +
Sbjct: 316 ENIHIRQCLMENGHGAVTVGSEMAGGVKNLVVEECRFYDTDRGLRIKTRRGRGKDAVLDQ 375
Query: 326 ITVSDVYMENARKGIKIAGDVGDHPDDKF----NPNALPVVNG---ITIKDVWGTKVQQ- 377
I + M+ I PD K + +PV +G I D K Q
Sbjct: 376 IIFRKIDMDQVMTPFVINCFYFCDPDGKTEFVQSREKMPVDDGTPAILRLDFEDIKAQNC 435
Query: 378 ---SGLIQGLKNSPFTGICLSNINLQGVAGPTS 407
+ GL I + NI + P S
Sbjct: 436 HVAAAYFDGLPEQKIEQIIMKNITVTYAKNPKS 468
>gi|326797927|ref|YP_004315746.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326548691|gb|ADZ77076.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 455
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 132/450 (29%), Positives = 199/450 (44%), Gaps = 69/450 (15%)
Query: 1 MFRFLVTLSILLSYFNC----------FSLASVVTCSGIVPMRYRN----DKISITDFGG 46
M +F V L LL F C + T G+V + N +++ ITD+G
Sbjct: 1 MEKFFVYLLCLLPIFVCAGNDTETEVTLDKRKIKTPFGVVSVESPNFSSCERLPITDYGA 60
Query: 47 VGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKA 106
+ +T +KA AI + L GG ++ +P G +LTG +L S++ L+L KGA++
Sbjct: 61 LQGNQTATSKAITTAIEKAHKL---GGGIVVIPAGEWLTGKIHLKSNVNLHLDKGALLLF 117
Query: 107 TQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWR 166
+++ ++ + + S G E Y I+ +++ ITG+ G I + +W W
Sbjct: 118 SENPADY--LPAVHSSWEGME--CYNYSPLIYAYECKNIAITGQ-GEIKAKMDVW-ETWF 171
Query: 167 QRTLPFT----------------------------RPNLIEFMNSRSIIISNVIFQNSPF 198
R P RP I+F S ++++ + NSPF
Sbjct: 172 TRPKPHMESIKRLYNLASAYTPLEQRQMVNDTAHLRPQFIQFNRSENVLLEGISITNSPF 231
Query: 199 WNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDE 258
W IH N++IR + + A N DG+DP+ S NV IE+ GDD +A+KSG +
Sbjct: 232 WTIHTYLSKNIIIRNLNVYAHGH--NNDGVDPEMSQNVLIENCVFDQGDDAIAIKSGRNP 289
Query: 259 YGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIH---VKT 315
G PS I IR T + IA+GSE SGG+ENV + + + H +KT
Sbjct: 290 EGWRLKAPSKNIIIRNCTVKNGHQLIAIGSELSGGIENVFVDSCVVMDGAKLNHLLFIKT 349
Query: 316 NIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFN-PNALPVVNG--ITIKDVW- 371
N GG++RNI Y N + G G +G D + N +P V IKDV+
Sbjct: 350 NERMGGYVRNI-----YASNLQAGRIELGILGIETDVLYQWRNLVPTVERRLTPIKDVYL 404
Query: 372 ----GTKVQQSGLIQGLKNSPFTGICLSNI 397
VQ I G K P I L N+
Sbjct: 405 NNVTAKNVQFVSRILGQKELPIENIVLKNV 434
>gi|346224313|ref|ZP_08845455.1| glycoside hydrolase family protein [Anaerophaga thermohalophila DSM
12881]
Length = 572
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 160/350 (45%), Gaps = 68/350 (19%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+SI DFG VGDG N+ AF +AI ++ GG + VP G++LTG + S++ L+L
Sbjct: 63 VSIVDFGAVGDGVFDNSDAFAQAI---DNVSEKGGGRVVVPRGLWLTGPIIMKSNIDLHL 119
Query: 99 AKGAVIKATQDTWNWPLIAP----LPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
GAV+ + D ++PLI L +Y R MS +H GL+++ TG NG
Sbjct: 120 EDGAVVHFSSDFDDYPLIDTSFEGLNTY---------RCMSPVHAHGLENIAFTG-NGIF 169
Query: 155 DGQGAIW---------WNMWR--------------------------------------- 166
DG G W + W+
Sbjct: 170 DGNGDAWRPVKKSKMTESQWKKLVNSGGVLSDDGEIWYPSEKSKAGDSRDNFNVPDLKTK 229
Query: 167 ---QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 223
++ F RP ++ + +++ FQNSP WNIHP+ +++IR +T+ P S
Sbjct: 230 EDFEKIKDFLRPVMVSIKGCKQVLLDGPTFQNSPAWNIHPLMSRDIIIRNLTVRNPWYSQ 289
Query: 224 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 283
N DG+D +S NV I ++ GDD + KSG +E G G P+ + ++ G
Sbjct: 290 NGDGLDLESCKNVLIYNNSFDVGDDAICFKSGKNEDGRRRGVPTENVIVKNNVVYHGHGG 349
Query: 284 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
+GSE SGGV NV + VG+ K+ GRGG + NI + ++ M
Sbjct: 350 FVIGSEMSGGVRNVHVANCTFIGTDVGLRFKSTRGRGGVVENIYIFNIDM 399
>gi|393764308|ref|ZP_10352920.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella agri BL06]
gi|392604938|gb|EIW87837.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella agri BL06]
Length = 481
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 195/422 (46%), Gaps = 63/422 (14%)
Query: 27 SGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTG 86
+ I P+++ + SITDFG NT A AI +GG + +P G + TG
Sbjct: 55 AAIKPVKFPDRSFSITDFGAAAKAGFDNTAAIAAAIAACAA---AGGGRVLIPGGRFETG 111
Query: 87 SFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVV 146
+ +L S++ L+LA V+ D ++ + + + G E G Y I+ +++
Sbjct: 112 AIHLKSNVNLHLADDTVLSFYTDREHY--LPYVMTRWEGVELMG--YSPLIYAYQQENIA 167
Query: 147 ITGENGTIDGQGAI--WW---NMWRQRT-----------------------LP------- 171
+TG NG ++G GA+ WW W +R +P
Sbjct: 168 LTG-NGILEGNGAVDAWWPWKGQWERRNWDYDASVDQVKTRSPLFEMAERGVPVSERVFN 226
Query: 172 --FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 229
F RP I+ + ++I V +NSPFW I+PV +V++R V ++ PN+DG +
Sbjct: 227 ENFLRPPFIQPYGCKRVLIEGVTIRNSPFWLINPVLSEDVIVRNVNCISYG--PNSDGCN 284
Query: 230 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 289
P+S + V IE+ TGDD +A+KSG + G P + I+ + G+ +GSE
Sbjct: 285 PESCNRVLIENCLFDTGDDCIALKSGRNNDGRRLATPVQNVVIQDCIMRAGHGGVVMGSE 344
Query: 290 TSGGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI----- 342
SGG N+ A + N+ GI +KTN RGG I N+ + D+ + R I I
Sbjct: 345 ISGGARNIFARRCRMSSPNLARGIRIKTNSVRGGLIENVYIRDIEIGEVRDAIVINFFYE 404
Query: 343 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 402
GD G N +P VN + I ++ K Q++ ++G + +P +G+ L ++
Sbjct: 405 EGDAG---------NFMPQVNNLHISNLTVQKAQRAFELRGFERAPISGVTLHHVQFNNT 455
Query: 403 AG 404
A
Sbjct: 456 AA 457
>gi|160887001|ref|ZP_02068004.1| hypothetical protein BACOVA_05015 [Bacteroides ovatus ATCC 8483]
gi|293369359|ref|ZP_06615944.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|156107412|gb|EDO09157.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|292635526|gb|EFF54033.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
Length = 469
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 182/387 (47%), Gaps = 53/387 (13%)
Query: 41 ITDFGGVGDGKTLNTKAFREAIYR-IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
ITDFG D + EAI + I SGG + VP G + TG L S++ +L
Sbjct: 52 ITDFGAKTDDEA---NPCHEAINQAILQCSLSGGGTVIVPKGTFYTGPITLKSNVNFHLE 108
Query: 100 KGAVIK-ATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
+GAV+K +T + +P + R I+ G ++ ITG+ G IDGQG
Sbjct: 109 EGAVLKFSTDQSLYFPAVLT-----RWEGIDCYNAHPLIYAYGESNIAITGK-GIIDGQG 162
Query: 159 AI--WWNM-------W-----------RQRTLPF-----------------TRPNLIEFM 181
++ WW M W R+R L + RP L+
Sbjct: 163 SMETWWPMCGAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMRPEDGMRPQLLNLH 222
Query: 182 NSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDS 241
+ +I+I V NSPFW IHP++C ++++ VT+ PN DG DP+S NV IE+
Sbjct: 223 SCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFNRG--PNGDGCDPESCKNVLIENC 280
Query: 242 YISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEH 301
TGDD +A+KSG +E G + PS I +R + G+ +GSE SGG N+ E
Sbjct: 281 TFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMKNGHGGVVIGSEISGGYRNLFVED 340
Query: 302 INLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNAL 359
+ N+ I +KT+ RGG I N+ V +V + R+ + + ++ +K
Sbjct: 341 CRMDSPNLDRVIRIKTSTCRGGLIENVYVRNVTVGQCREAV-LRINLQYENREKCKRGFD 399
Query: 360 PVVNGITIKDVWGTKVQQSGLIQGLKN 386
P+V + +K+V K + LI GL++
Sbjct: 400 PIVRNVHLKNVTCEKSKLGVLIIGLED 426
>gi|423223575|ref|ZP_17210044.1| hypothetical protein HMPREF1062_02230 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638200|gb|EIY32047.1| hypothetical protein HMPREF1062_02230 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 532
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 188/411 (45%), Gaps = 53/411 (12%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
++S+ ++GG+G+G TLNT+AF AI L GG L VP G++LTG L S++ L+
Sbjct: 49 EVSLAEYGGIGNGMTLNTQAFAAAI---ADLSERGGGHLIVPEGIWLTGPIVLKSNIDLH 105
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGR-ERPGGRYMSF---IHGDGLQD--------- 144
+ K A++ T D +PL++P R + P Y I G+G+ D
Sbjct: 106 VLKNAIVLFTPDKTQYPLLSPDEGTSGSRCQSPISAYHESNFSITGEGVFDGNGELWRPV 165
Query: 145 ------------VVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVI 192
+ TG GT+ GAIW+ L RP ++ F+ +++ V+
Sbjct: 166 KRFKVSNAEWNSFIKTG--GTVKQDGAIWYPETSSEKLAKKRPRMVRFVRCERVLLQGVV 223
Query: 193 FQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAV 252
FQNSP ++++ + N+V+ + + P ++ N DGID S +N I + + GDD + +
Sbjct: 224 FQNSPSFHVNFILSDNIVVDGIMVRCPWNAQNGDGIDLSSCTNALIVNCAVDAGDDAICL 283
Query: 253 KSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 312
KSG + G G P + I I T G +GS+T GG++ V + + G+
Sbjct: 284 KSGIGDVGRRRG-PCANIIIDNCTVFHGHGGFVIGSDTGGGIDRVSVRNCRFIDTDTGLR 342
Query: 313 VKTNIGRGGFIRNITVSDVYMENARK-----------------GIKIAGDVGDHPDDKFN 355
K+ GRGG + N+ V ++ M + GI G++ D P F
Sbjct: 343 FKSKRGRGGVVSNVYVDNIMMNDIANYAIWFDSYYQEKTPEPDGIPEGGEMTDVP---FM 399
Query: 356 P--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 404
P + P I I ++ ++ GL + + L++ + VAG
Sbjct: 400 PVTDDTPCFQDIHISNITCRDAGRAMFFNGLPEMNVSNVSLTDCMIHSVAG 450
>gi|418299606|ref|ZP_12911438.1| polygalacturonase-like protein [Agrobacterium tumefaciens
CCNWGS0286]
gi|355534759|gb|EHH04058.1| polygalacturonase-like protein [Agrobacterium tumefaciens
CCNWGS0286]
Length = 517
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 113/414 (27%), Positives = 186/414 (44%), Gaps = 34/414 (8%)
Query: 49 DGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQ 108
+G N +A A+ + GGTL + GV+ L S+M +LA+GAV++A
Sbjct: 101 EGARANAQALERAVAAVPQ----GGTL-RLAAGVWTASPVRLKSNMAFHLAQGAVLRAPS 155
Query: 109 DTWNWPLIAPLPSYGRG----RERPGGRYMSFIHGDGLQDVVITGENGTIDGQG--AIWW 162
WP++ GR P + + +H G+ ++VI G G +DG G WW
Sbjct: 156 TRRGWPILPARDEAGRMLGSWEGLPDACFTAPVHAIGVDNLVIEGR-GILDGSGDKGDWW 214
Query: 163 NMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS 222
++ RP + ++ R + +N+ W IHP C +++ ++I AP DS
Sbjct: 215 RWPKETRDGARRPRGLHLVSCRKTNLLGFTIRNAASWTIHPQGCEDLIAAGLSIAAPHDS 274
Query: 223 PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH--PSSGITIRRVTGSSP 280
PNTDG +P+S NV I S GDD +AVK+G H + G+ +
Sbjct: 275 PNTDGFNPESCRNVTISGVRFSVGDDCIAVKAGKRGPDGEDDHLAETRGVRVGHCLMERG 334
Query: 281 FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 340
G+ +GSE SGGV +V E ++ G+ +KT GRGG + NI + V ++ + +
Sbjct: 335 HGGLVIGSEMSGGVHDVAVEDCDMIGTDRGLRLKTRRGRGGAVSNIAMRRVLLDGVKTAL 394
Query: 341 KIAG----DVGDHPD--DKFNP----NALPVVNGITIKDVWGTKVQQ-SGLIQGLKNSPF 389
D H D NP + P ++GIT++DV + +G GL +P
Sbjct: 395 SANAHYHCDADGHDDWVQSRNPAPVDSGTPFIDGITVEDVEIRNLSHAAGAFLGLAEAPI 454
Query: 390 TGICLSNINL--QGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSN 441
+ + N+ + + ++ +PP+ A +V+P + Q C N
Sbjct: 455 RNVTIRNVTIVSRDLSAIATPPIM-------ADRVRPMRHEAIVFEQAHIVCDN 501
>gi|260642167|ref|ZP_05414737.2| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260623411|gb|EEX46282.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 469
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 182/387 (47%), Gaps = 53/387 (13%)
Query: 41 ITDFGGVGDGKTLNTKAFREAIYR-IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
ITDFG D + EAI + I SGG + VP G + TG L S++ +L
Sbjct: 52 ITDFGAKTDDEA---NPCHEAINQAILQCSLSGGGTVIVPKGTFYTGPITLKSNVNFHLE 108
Query: 100 KGAVIK-ATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
+GAV+K +T + +P + R I+ G ++ ITG+ G IDGQG
Sbjct: 109 EGAVLKFSTDQSLYFPAVLT-----RWEGIDCYNAHPLIYAYGESNIAITGK-GIIDGQG 162
Query: 159 AI--WWNM-------W-----------RQRTLPF-----------------TRPNLIEFM 181
++ WW M W R+R L + RP L+
Sbjct: 163 SMETWWPMCGAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMKPEDGMRPQLLNLH 222
Query: 182 NSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDS 241
+ +I+I V NSPFW IHP++C ++++ VT+ PN DG DP+S NV IE+
Sbjct: 223 SCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFNRG--PNGDGCDPESCKNVLIENC 280
Query: 242 YISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEH 301
TGDD +A+KSG +E G + PS I +R + G+ +GSE SGG N+ E
Sbjct: 281 TFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGHGGVVIGSEISGGYRNLFVED 340
Query: 302 INLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNAL 359
+ N+ I +KT+ RGG I N+ V +V + R+ + + ++ +K
Sbjct: 341 CRMDSPNLDRVIRIKTSTCRGGLIENVYVRNVTVGQCREAV-LRINLQYENREKCKRGFD 399
Query: 360 PVVNGITIKDVWGTKVQQSGLIQGLKN 386
P+V + +K+V K + LI GL++
Sbjct: 400 PIVRNVHLKNVTCEKSKLGVLIIGLED 426
>gi|336406856|ref|ZP_08587502.1| hypothetical protein HMPREF0127_04815 [Bacteroides sp. 1_1_30]
gi|335948529|gb|EGN10233.1| hypothetical protein HMPREF0127_04815 [Bacteroides sp. 1_1_30]
Length = 469
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 182/387 (47%), Gaps = 53/387 (13%)
Query: 41 ITDFGGVGDGKTLNTKAFREAIYR-IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
ITDFG D + EAI + I SGG + VP G + TG L S++ +L
Sbjct: 52 ITDFGAKTDDEA---NPCHEAINQAILQCSLSGGGTVIVPKGTFYTGPITLKSNVNFHLE 108
Query: 100 KGAVIK-ATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
+GAV+K +T + +P + R I+ G ++ ITG+ G IDGQG
Sbjct: 109 EGAVLKFSTDQSLYFPAVLT-----RWEGIDCYNAHPLIYAYGESNIAITGK-GIIDGQG 162
Query: 159 AI--WWNM-------W-----------RQRTLPF-----------------TRPNLIEFM 181
++ WW M W R+R L + RP L+
Sbjct: 163 SMETWWPMCGAVKYGWKEGMVAQRNGGRERLLMYGETLTPVYKRLMKPEDGMRPQLLNLH 222
Query: 182 NSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDS 241
+ +I+I V NSPFW IHP++C ++++ VT+ PN DG DP+S NV IE+
Sbjct: 223 SCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFNRG--PNGDGCDPESCKNVLIENC 280
Query: 242 YISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEH 301
TGDD +A+KSG +E G + PS I +R + G+ +GSE SGG N+ E
Sbjct: 281 TFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGHGGVVIGSEISGGYRNLFVED 340
Query: 302 INLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNAL 359
+ N+ I +KT+ RGG I N+ V +V + R+ + + ++ +K
Sbjct: 341 CRMDSPNLDRVIRIKTSTCRGGLIENVYVRNVTVGQCREAV-LRINLQYENREKCKRGFD 399
Query: 360 PVVNGITIKDVWGTKVQQSGLIQGLKN 386
P+V + +K+V K + LI GL++
Sbjct: 400 PIVRNVHLKNVTCEKSKLGVLIIGLED 426
>gi|299148506|ref|ZP_07041568.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|423288903|ref|ZP_17267754.1| hypothetical protein HMPREF1069_02797 [Bacteroides ovatus
CL02T12C04]
gi|298513267|gb|EFI37154.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|392668993|gb|EIY62485.1| hypothetical protein HMPREF1069_02797 [Bacteroides ovatus
CL02T12C04]
Length = 469
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 182/387 (47%), Gaps = 53/387 (13%)
Query: 41 ITDFGGVGDGKTLNTKAFREAIYR-IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
ITDFG D + EAI + I SGG + VP G + TG L S++ +L
Sbjct: 52 ITDFGAKTDDEA---NPCHEAINQAILQCSLSGGGTVIVPKGTFYTGPITLKSNVNFHLE 108
Query: 100 KGAVIK-ATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
+GAV+K +T + +P + R I+ G ++ ITG+ G IDGQG
Sbjct: 109 EGAVLKFSTDQSLYFPAVLT-----RWEGIDCYNAHPLIYAYGESNIAITGK-GIIDGQG 162
Query: 159 AI--WWNM-------W-----------RQRTLPF-----------------TRPNLIEFM 181
++ WW M W R+R L + RP L+
Sbjct: 163 SMETWWPMCGAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMKPEDGMRPQLLNLH 222
Query: 182 NSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDS 241
+ +I+I V NSPFW IHP++C ++++ VT+ PN DG DP+S NV IE+
Sbjct: 223 SCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFNRG--PNGDGCDPESCKNVLIENC 280
Query: 242 YISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEH 301
TGDD +A+KSG +E G + PS I +R + G+ +GSE SGG N+ E
Sbjct: 281 TFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGHGGVVIGSEISGGYRNLFVED 340
Query: 302 INLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNAL 359
+ N+ I +KT+ RGG I N+ V +V + R+ + + ++ +K
Sbjct: 341 CRMDSPNLDRVIRIKTSTCRGGLIENVFVRNVTVGQCREAV-LRINLQYENREKCKRGFD 399
Query: 360 PVVNGITIKDVWGTKVQQSGLIQGLKN 386
P+V + +K+V K + LI GL++
Sbjct: 400 PIVRNVHLKNVTCEKSKLGVLIIGLED 426
>gi|336414764|ref|ZP_08595108.1| hypothetical protein HMPREF1017_02216 [Bacteroides ovatus
3_8_47FAA]
gi|335942134|gb|EGN03982.1| hypothetical protein HMPREF1017_02216 [Bacteroides ovatus
3_8_47FAA]
Length = 469
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 127/438 (28%), Positives = 197/438 (44%), Gaps = 64/438 (14%)
Query: 1 MFRFLVTLSILLSYFNCFSLASVVTCSGIVPMRYRNDK-----------ISITDFGGVGD 49
M R + L ++L + + A+ V R +K ITDFG D
Sbjct: 1 MMRRTINLLLMLLFVAEVTFANTVDFDKAFKESARIEKQIKRTSFPKRTFLITDFGAKTD 60
Query: 50 GKTLNTKAFREAIYR-IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIK-AT 107
+ EAI + I SGG + VP G + TG L S++ +L +GAV+K +T
Sbjct: 61 DEA---NPCHEAINQAILQCSLSGGGTVIVPKGTFYTGPITLKSNVNFHLEEGAVLKFST 117
Query: 108 QDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAI--WWNM- 164
+ +P + R I+ G ++ ITG+ G IDGQG++ WW M
Sbjct: 118 DQSLYFPAVLT-----RWEGIDCYNAHPLIYAYGESNIAITGK-GIIDGQGSMETWWPMC 171
Query: 165 ------W-----------RQRTLPF-----------------TRPNLIEFMNSRSIIISN 190
W R+R L + RP L+ + +I+I
Sbjct: 172 GAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMKPEDGMRPQLLNLHSCHTILIEG 231
Query: 191 VIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLV 250
V NSPFW IHP++C ++++ VT+ PN DG DP+S NV IE+ TGDD +
Sbjct: 232 VTLLNSPFWVIHPLFCESLIVSGVTVFNRG--PNGDGCDPESCKNVLIENCTFDTGDDCI 289
Query: 251 AVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLY--NVG 308
A+KSG +E G + PS I +R + G+ +GSE SGG N+ E + N+
Sbjct: 290 AIKSGRNEDGRKWNIPSENIIVRGCMMRNGHGGVVIGSEISGGYRNLFVEDCRMDSPNLD 349
Query: 309 VGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIK 368
I +KT+ RGG I N+ V +V + R+ + + ++ +K P+V + +K
Sbjct: 350 RVIRIKTSTCRGGLIENVFVRNVTVGQCREAV-LRINLQYENREKCKRGFDPIVRNVHLK 408
Query: 369 DVWGTKVQQSGLIQGLKN 386
+V K + LI GL++
Sbjct: 409 NVTCEKSKLGVLIIGLED 426
>gi|238917515|ref|YP_002931032.1| glycoside hydrolase family 28 [Eubacterium eligens ATCC 27750]
gi|238872875|gb|ACR72585.1| Glycoside Hydrolase Family 28 [Eubacterium eligens ATCC 27750]
Length = 518
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 117/397 (29%), Positives = 180/397 (45%), Gaps = 35/397 (8%)
Query: 31 PMRYRND----KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTG 86
P+ ++ D +++ +FG GDG+ +T A + AI R + VP GVY
Sbjct: 70 PVEFKTDYEYVTLNVREFGAYGDGEHDDTNAIQCAIMAAPKDSR-----VLVPEGVYKIS 124
Query: 87 SFNLTSHMTLYLAKGAVIKATQDTWNWPLI-APLPSY--------GRGRERPGGRYMSFI 137
S L ++ L LAKGAV+ A + +P++ + +Y G P + + +
Sbjct: 125 SIFLKDNLNLELAKGAVLSAFTEREKFPILPGQIETYDEKDYYNLGTWEGNPLDMFSAIV 184
Query: 138 HGDGLQDVVITGENGTIDGQGAI--WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQN 195
G +V ITGE GTIDG WW + R + RP L N ++ + + QN
Sbjct: 185 CGINCSNVTITGE-GTIDGCTTHDNWWKNCKIRNTAW-RPRLFFINNCSNVTMHGITVQN 242
Query: 196 SPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSG 255
SP W IHP + ++ V IL PA+S NTDG+DP+S +V + +YIS GDD +A+KSG
Sbjct: 243 SPSWTIHPYFSKHLKFIDVKILNPANSHNTDGLDPESCQDVLVLGTYISVGDDCIAIKSG 302
Query: 256 WDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKT 315
P+ +T+R+ + VGSE + GV++V N G+ VKT
Sbjct: 303 KIYMAQKEKTPTEDMTVRQCCMRDGHGAVTVGSEIAAGVKDVHIRDCMFMNTDRGLRVKT 362
Query: 316 NIGRGGF--IRNITVSDVYMENARKGIKIAGDVGDHPDDKFN----------PNALPVVN 363
GRG + +I+ ++ M+N + PD K + P +
Sbjct: 363 RRGRGKLSVLDDISFENIDMDNVMTPFVVNSFYFCDPDGKTEYVGSRKPLPVDDRTPSIK 422
Query: 364 GITIKDVWGTKVQQSG-LIQGLKNSPFTGICLSNINL 399
+T KD+ +G I GL S + NIN
Sbjct: 423 SLTFKDINAKNCHVAGAYIFGLPESKVEKLTFENINF 459
>gi|295086754|emb|CBK68277.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
Length = 459
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 182/387 (47%), Gaps = 53/387 (13%)
Query: 41 ITDFGGVGDGKTLNTKAFREAIYR-IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
ITDFG D + EAI + I SGG + VP G + TG L S++ +L
Sbjct: 42 ITDFGAKTDDEA---NPCHEAINQAILQCSLSGGGTVIVPKGTFYTGPITLKSNVNFHLE 98
Query: 100 KGAVIK-ATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
+GAV+K +T + +P + R I+ G ++ ITG+ G IDGQG
Sbjct: 99 EGAVLKFSTDQSLYFPAVLT-----RWEGIDCYNAHPLIYAYGESNIAITGK-GIIDGQG 152
Query: 159 AI--WWNM-------W-----------RQRTLPF-----------------TRPNLIEFM 181
++ WW M W R+R L + RP L+
Sbjct: 153 SMETWWPMCGAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMKPEDGMRPQLLNLH 212
Query: 182 NSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDS 241
+ +I+I V NSPFW IHP++C ++++ VT+ PN DG DP+S NV IE+
Sbjct: 213 SCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFNRG--PNGDGCDPESCKNVLIENC 270
Query: 242 YISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEH 301
TGDD +A+KSG +E G + PS I +R + G+ +GSE SGG N+ E
Sbjct: 271 TFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGHGGVVIGSEISGGYRNLFVED 330
Query: 302 INLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNAL 359
+ N+ I +KT+ RGG I N+ V +V + R+ + + ++ +K
Sbjct: 331 CRMDSPNLDRVIRIKTSTCRGGLIENVYVRNVTVGQCREAV-LRINLQYENREKCKRGFD 389
Query: 360 PVVNGITIKDVWGTKVQQSGLIQGLKN 386
P+V + +K+V K + LI GL++
Sbjct: 390 PIVRNVHLKNVTCEKSKLGVLIIGLED 416
>gi|269957316|ref|YP_003327105.1| glycoside hydrolase family 28 [Xylanimonas cellulosilytica DSM
15894]
gi|269305997|gb|ACZ31547.1| glycoside hydrolase family 28 [Xylanimonas cellulosilytica DSM
15894]
Length = 459
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 161/351 (45%), Gaps = 27/351 (7%)
Query: 64 RIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYG 123
RI GG + V PGV+ TGS L SH+ L++ GAV++ D +P P
Sbjct: 32 RIDEAAARGGGRVTVGPGVHRTGSLRLRSHVELHVEAGAVLQFVPDPALYP-----PVEA 86
Query: 124 RGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNS 183
R P + ++ + V ITG+ G G WW +R TL RP L+
Sbjct: 87 RWEGAPATIHQPCLYAHDAEHVAITGDGVIDGGGGP-WWEAFRAGTLAHPRPTLVGLHRC 145
Query: 184 RSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYI 243
+ + +V ++SP W +HP+ C +V +R VTI+ P DSPNTDGIDP+S NV I +I
Sbjct: 146 THVRLRDVTLRSSPAWTVHPLLCDDVAVRDVTIVNPPDSPNTDGIDPESCRNVRISGCHI 205
Query: 244 STGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHIN 303
GDD +A+K+G + + + T G+ +GSE SGG+ NV+
Sbjct: 206 DVGDDCIALKAGTEASPERVA--CENVVVTGCTLVHGHGGVVLGSEMSGGIRNVVVADCV 263
Query: 304 LYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI--------------AGDVGDH 349
GI +K GRGG + ++ VS+V M++ + + GD G
Sbjct: 264 FQGTDRGIRLKARRGRGGVVEDVRVSNVVMDDVGCPLVLNQHYDRGPGGDSPHVGDRGAL 323
Query: 350 PDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQ-GLKNSPFTGICLSNINL 399
P D P+ IT+ V V+ + + GL P + L ++ +
Sbjct: 324 PVDATT----PLFRRITVAHVSARNVRAAAVFALGLAEQPVAELVLDDVAV 370
>gi|357494033|ref|XP_003617305.1| Glycoside hydrolase family 28 protein [Medicago truncatula]
gi|355518640|gb|AET00264.1| Glycoside hydrolase family 28 protein [Medicago truncatula]
Length = 156
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 97/195 (49%), Positives = 118/195 (60%), Gaps = 42/195 (21%)
Query: 252 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGI 311
+KSGWD+YGI+YG SS ITIR V+GSSPF GIA SETSG V+NV +GI
Sbjct: 1 MKSGWDKYGISYGRLSSSITIRHVSGSSPFIGIAGVSETSGRVDNV---------NDMGI 51
Query: 312 HVKTNIGRGGFIRNITVSDVYME-NARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 370
K VY+ ++GI+I+GDVGDHPDDK + NALP+V
Sbjct: 52 EYKC---------------VYIYGECKEGIQISGDVGDHPDDKCDLNALPIV-------- 88
Query: 371 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTS--PPLKCSDVSGSAYQVKPWPCS 428
++GLIQG+KNSPFT ICLS+INL V G S P KCSDV G A QV PWPC
Sbjct: 89 ------KAGLIQGMKNSPFTDICLSDINLHEVNGTRSRTPSCKCSDVFGVALQVSPWPCP 142
Query: 429 ELSSSQQTGACSNHF 443
EL S Q G+C +++
Sbjct: 143 EL-ISHQLGSCVSYY 156
>gi|397170830|ref|ZP_10494240.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella aestuarii B11]
gi|396087304|gb|EJI84904.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella aestuarii B11]
Length = 481
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 119/423 (28%), Positives = 196/423 (46%), Gaps = 65/423 (15%)
Query: 27 SGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTG 86
+ I P+++ + SITDFG NT A AI +GG + +P G + TG
Sbjct: 55 AAIKPVKFPDRSFSITDFGAAAKAGFDNTAAIAAAIAACAA---AGGGRVLIPGGRFETG 111
Query: 87 SFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVV 146
+ +L S++ L+LA V+ D ++ + + + G E G Y I+ +++
Sbjct: 112 AIHLKSNVNLHLADDTVLSFYTDRKHY--LPYVMTRWEGVELMG--YSPLIYAYQQENIA 167
Query: 147 ITGENGTIDGQGAI--WWNMWR---------------------------QRTLP------ 171
+TG NG ++G GA+ WW W+ +R +P
Sbjct: 168 LTG-NGILEGNGAVDAWW-PWKGDWERRNWDYDASVDQVKTRSPLFEMAERGVPVSERVF 225
Query: 172 ---FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGI 228
F RP I+ + ++I V +NSPFW I+PV +V++R V ++ PN+DG
Sbjct: 226 NENFLRPPFIQPYGCKRVLIEGVTIRNSPFWLINPVLSEDVIVRNVNCISYG--PNSDGC 283
Query: 229 DPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 288
+P+S + V IE+ TGDD +A+KSG + G P + I+ + G+ +GS
Sbjct: 284 NPESCNRVLIENCLFDTGDDCIALKSGRNNDGRRLATPVQNVVIQDCIMRAGHGGVVMGS 343
Query: 289 ETSGGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI---- 342
E SGG N+ A + N+ GI +KTN RGG I N+ + D+ + R I I
Sbjct: 344 EISGGARNIFARRCRMSSPNLARGIRIKTNSVRGGLIENVYIRDIEIGEVRDAIVINFFY 403
Query: 343 -AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 401
GD G N +P VN + I ++ K Q++ ++G + +P +G+ L ++
Sbjct: 404 EEGDAG---------NFMPQVNNLHISNLTVQKAQRAFELRGFERAPISGVTLHHVQFNN 454
Query: 402 VAG 404
A
Sbjct: 455 TAA 457
>gi|157693735|ref|YP_001488197.1| glycoside hydrolase [Bacillus pumilus SAFR-032]
gi|157682493|gb|ABV63637.1| glycoside hydrolase [Bacillus pumilus SAFR-032]
Length = 463
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 124/410 (30%), Positives = 193/410 (47%), Gaps = 60/410 (14%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+ ++ +G G L+T+A + AI L+ GG +L +P G ++TG+ L SH+ L+
Sbjct: 53 EFNVVHYGADAQGIELSTEAIQSAIDDAHRLK--GGRVL-IPEGTFVTGALELKSHVELH 109
Query: 98 LAKGAVIKATQDTWNW-PLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDG 156
L + A + +Q+ ++ PL+ L Y G E Y I+ +++ ITG GT+DG
Sbjct: 110 LHEKAYVSFSQNPKDYLPLV--LTRY-EGVELYN--YSPLIYAHHAENIAITGA-GTLDG 163
Query: 157 QG--AIWW----------NMWRQRTLPFT-------------------RPNLIEFMNSRS 185
+G WW + R R L F R + I+ +
Sbjct: 164 RGDEHHWWPWKYGTNGQPSQERDRQLLFDMAEKRRPVEERVFGEGHYLRSSFIQPYQCQQ 223
Query: 186 IIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYIST 245
++I V ++SP W IHPV +V++R V I+ PNTDG++P+S NV IED Y
Sbjct: 224 VLIEGVTVKDSPMWQIHPVLSEHVIVRGVHII--GHGPNTDGVNPESCRNVLIEDCYFDN 281
Query: 246 GDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEH--IN 303
GDD +A+KSG +E G G PS I IRR G+ +GSE SGGV V AE+ ++
Sbjct: 282 GDDCIAIKSGRNEDGRRIGIPSENIVIRRNEMRDGHGGVTIGSEISGGVRYVYAENNVMD 341
Query: 304 LYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI------AGDVGDHPDDKFNPN 357
N+ + +KTN RGG I +I + +++ + + GD G H
Sbjct: 342 SPNLDRALRIKTNSVRGGTIEHIYFKNNTVKSLKHEVVCIDMMYEEGDAGPH-------- 393
Query: 358 ALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTS 407
PVV I ++ + + + I +SP T + N + V P S
Sbjct: 394 -RPVVRHIEVEGLKSSGGRYGVKIAAYSHSPVTNFNMKNCVIDHVTYPLS 442
>gi|167763470|ref|ZP_02435597.1| hypothetical protein BACSTE_01844 [Bacteroides stercoris ATCC
43183]
gi|167698764|gb|EDS15343.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 467
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 118/387 (30%), Positives = 188/387 (48%), Gaps = 53/387 (13%)
Query: 41 ITDFGGVGDGKTLNTKAFREAIYR-IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
ITDFG D + EAI R I +GG + VP G + TG L S++ ++
Sbjct: 50 ITDFGAQPDTPD---EPCHEAINRAILTCSLNGGGTVVVPKGTFHTGPITLKSNVNFHVE 106
Query: 100 KGAVIK-ATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
+GAV+K +T + +P + + G + R + + +G+ ++ ITG+ GTIDGQG
Sbjct: 107 EGAVLKFSTDQSLYFPAVI---TRWEGLDCYNARPLIYAYGE--TNIAITGK-GTIDGQG 160
Query: 159 A--IWWNM-------W-----------RQRTLPF-----------------TRPNLIEFM 181
+ WW M W R+R L + RP LI
Sbjct: 161 SNETWWPMCGASRYGWKEGMVAQRNGGRERLLMYGETSTPVYKRIMKPEDGMRPQLINLY 220
Query: 182 NSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDS 241
+ +++I +V NSPFW IHP++C ++++R V + PN DG DP+S NV IE+
Sbjct: 221 SCNTVLIEDVTLLNSPFWVIHPLFCESLIVRGVHVFNRG--PNGDGCDPESCKNVLIENC 278
Query: 242 YISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEH 301
TGDD +A+KSG ++ G + PS I +R + G+ +GSE SGG N+ E+
Sbjct: 279 TFDTGDDCIAIKSGRNQDGRKWNIPSENIIVRGCFMKNGHGGVVIGSEISGGYRNLFVEN 338
Query: 302 INLYNVGVG--IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNAL 359
+ + + I +KT+ RGG I N+ V +V + R+ + + ++ +K N
Sbjct: 339 CRMDSPDLDRVIRIKTSTCRGGLIENVFVRNVTVGQCREAV-LRINLQYENREKCNRGYA 397
Query: 360 PVVNGITIKDVWGTKVQQSGLIQGLKN 386
P V + +K+V K + LI GL +
Sbjct: 398 PTVRNVHLKNVTCEKSKLGVLIIGLDD 424
>gi|300725841|ref|ZP_07059307.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
gi|299776888|gb|EFI73432.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
Length = 447
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 184/405 (45%), Gaps = 40/405 (9%)
Query: 34 YRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSH 93
+ N ++SI DFG +NT A +AI + + + GG + +P G ++TG+ + S+
Sbjct: 21 FANYEVSIIDFGAQCGPDHVNTMAINQAI---KAVSQHGGGKVIIPAGYWMTGAIEMQSN 77
Query: 94 MTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGT 153
+ LYL A + T + ++ L+ P R ++ I G LQ++ ITG +G
Sbjct: 78 VNLYLDYNAFVSFTTNISDYRLVDT-----DFEGSPSKRCIAPISGTHLQNIAITG-HGV 131
Query: 154 IDGQGAIWWNMWRQRTLP-----FT----------------------RPNLIEFMNSRSI 186
DG G W + R + FT RP L+ F + +++
Sbjct: 132 FDGSGERWRPVKRSKLTSAQWKNFTSRPGSVNKKGDVWEPDSNAANIRPVLLNFTSCKNV 191
Query: 187 IISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTG 246
+ V F+NSP W +HP+ C NV I + + P + N D +D +S NV I +S G
Sbjct: 192 KLEGVTFKNSPAWCVHPLLCENVTIDNIKVNNPWYAQNGDALDVESCKNVVIINSLFDAG 251
Query: 247 DDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYN 306
DD + +KSG +E G G P + I+ T G +GSE SGGV+N+
Sbjct: 252 DDAICIKSGKNEAGRRRGVPCENVYIKNNTVLHGHGGFVIGSEMSGGVKNIYISDCTFIG 311
Query: 307 VGVGIHVKTNIGRGGFIRNITVSDVYMENARKG---IKIAGDVGDHPDDKFNPN-ALPVV 362
VG+ K+ GRGG + NI + + M+N + + P ++ + N PV
Sbjct: 312 TDVGLRFKSARGRGGVVENIYIDRINMKNIVNEAITMNLYYSSNGKPAERTDVNEGTPVF 371
Query: 363 NGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTS 407
I +K++ +S + GL P I + N+ + +A +S
Sbjct: 372 RNIEMKNLLVEGAGKSFYLYGLPEMPLENISIQNMRVSKIAETSS 416
>gi|329954471|ref|ZP_08295562.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328527439|gb|EGF54436.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 467
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 189/387 (48%), Gaps = 53/387 (13%)
Query: 41 ITDFGGVGDGKTLNTKAFREAIYR-IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
ITDFG D + EAI + I +GG + VP G + TG L S++ ++
Sbjct: 50 ITDFGAKPDTPD---EPCHEAINQAIVTCSLNGGGTVVVPKGTFHTGPVTLKSNVNFHVE 106
Query: 100 KGAVIK-ATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
+GAV+K +T + +P + + G + R + + +G+ ++ ITG+ GTIDGQG
Sbjct: 107 EGAVLKFSTDQSLYFPAVI---TRWEGLDCYNARPLIYAYGE--TNIAITGK-GTIDGQG 160
Query: 159 A--IWWNM-------W-----------RQRTLPF-----------------TRPNLIEFM 181
+ WW+M W R+R L + RP LI
Sbjct: 161 SNETWWSMCGAPRYGWKEGMVAQRNGGRERLLMYGETSTPIYKRIMKPEDGMRPQLINLY 220
Query: 182 NSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDS 241
+ +++I +V NSPFW IHP++C ++++R V + PN DG DP+S NV IE+
Sbjct: 221 SCNTVLIEDVTLLNSPFWVIHPLFCESLIVRGVHVFNRG--PNGDGCDPESCKNVLIENC 278
Query: 242 YISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEH 301
TGDD +A+KSG ++ G + PS I +R + G+ +GSE SGG N+ E+
Sbjct: 279 TFDTGDDCIAIKSGRNQDGRKWNIPSENIIVRSCFMKNGHGGVVIGSEISGGYRNLFVEN 338
Query: 302 INLYNVGVG--IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNAL 359
+ + + I +KT+ RGG I N+ V +V + R+ + + ++ +K N
Sbjct: 339 CRMDSPDLDRVIRIKTSTCRGGLIENVFVRNVTVGQCREAV-LRINLQYENREKCNRGYA 397
Query: 360 PVVNGITIKDVWGTKVQQSGLIQGLKN 386
P V + +K+V K + LI GL +
Sbjct: 398 PTVRNVHLKNVTCEKSKLGVLIIGLDD 424
>gi|390436865|ref|ZP_10225403.1| polygalacturonase [Pantoea agglomerans IG1]
Length = 430
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 108/321 (33%), Positives = 162/321 (50%), Gaps = 40/321 (12%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+I+I DF V D +L+T+A + AI G + +P G +LTG+ L S MTL
Sbjct: 3 RINIIDFDAVPDATSLSTQAIQRAIDSAAE-----GDTVLIPAGRFLTGALFLKSKMTLE 57
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYM----SFIHGDGLQDVVITGENGT 153
LAK AV+ +Q ++P IA R G M + ++ + ++V + G +GT
Sbjct: 58 LAKDAVLLGSQQLEDYPEIAT---------RVAGIDMVWPTAMLNINQCRNVTVCG-SGT 107
Query: 154 IDGQGAIWWNM-------------WRQRTLPFT------RPNLIEFMNSRSIIISNVIFQ 194
+DGQGA+WW+ + +R L + RP + S + + + +
Sbjct: 108 LDGQGAVWWHKFWGDDENSGMLADYTRRGLRWVVDYDCRRPRNLVVYQSECVTLQDFTSK 167
Query: 195 NSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKS 254
+S FWN+H Y V ++ + ++ A P+TDGID DSS V +E +S DD + VKS
Sbjct: 168 DSGFWNLHVCYSKQVNLQRLNVM-NATGPSTDGIDIDSSQLVRVEGCTVSCNDDNICVKS 226
Query: 255 GWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVK 314
G + I IR T SGI +GSETSGG+ENV+ EH GVG +K
Sbjct: 227 GRGAEAQQLARTARDIIIRDCTLLKG-SGITLGSETSGGIENVIIEHNRFSGTGVGFRIK 285
Query: 315 TNIGRGGFIRNITVSDVYMEN 335
+ RGG+I+NI V + ME+
Sbjct: 286 SARNRGGWIKNIIVRHLIMED 306
>gi|325298782|ref|YP_004258699.1| Polygalacturonase [Bacteroides salanitronis DSM 18170]
gi|324318335|gb|ADY36226.1| Polygalacturonase [Bacteroides salanitronis DSM 18170]
Length = 535
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 120/430 (27%), Positives = 187/430 (43%), Gaps = 82/430 (19%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
SIT+FG V DG TLNT+AF + I + + GG + VP G++LTG L S++ L+L
Sbjct: 60 SITEFGAVADGITLNTEAFAQTI---DAVSQQGGGTVVVPAGLWLTGPIVLKSNINLHLE 116
Query: 100 KGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGA 159
+ A++ T D +P+I S+ R R S + +G +++ ITG+ G +DG G
Sbjct: 117 ENALVLFTADHTQYPIIKT--SFEGLETR---RCQSPVSANGAENIAITGK-GVMDGNGD 170
Query: 160 IW------------WN--------------MW-------------RQRTLP--------- 171
W WN +W + +P
Sbjct: 171 TWRPVKKGKMTASQWNKLVASGGVLNEKGDIWYPSEGSIKGANACKDFNVPEGIETEEDW 230
Query: 172 -----FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 226
+ RP L+ F+ + +++ V F+NSP W +HP+ C ++ + +++ P S N D
Sbjct: 231 NSIRDWLRPVLLSFIKCKKVLLEGVTFKNSPSWCLHPLSCEDLTVYNISVSNPWYSQNGD 290
Query: 227 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 286
+D +S + V + +S GDD + +KSG DE G G P I IR G V
Sbjct: 291 ALDIESCNRVLVLNSSFDAGDDGICIKSGKDESGRRRGEPCQNIIIRDNVVLHGHGGFVV 350
Query: 287 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR--------------NITVSDVY 332
GSE SGGV+N+ ++ VG+ K+ GRGG + + D++
Sbjct: 351 GSEMSGGVKNIYVDNCTFLGTDVGLRFKSTRGRGGVVENIHINNINMINIPNEALIFDLF 410
Query: 333 MENARKGIKIAGDVGDHPDDKFNP---NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPF 389
G GD P ++ P P I IK+V V ++ L GL P
Sbjct: 411 YGGNAPG---EGDAPGAPKEEVVPPVTEETPAFRDIFIKNVTAKNVGRAVLFNGLPEMPI 467
Query: 390 TGICLSNINL 399
I L N+ +
Sbjct: 468 KNIFLENVTI 477
>gi|354723575|ref|ZP_09037790.1| glycoside hydrolase family protein [Enterobacter mori LMG 25706]
Length = 430
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 120/406 (29%), Positives = 189/406 (46%), Gaps = 56/406 (13%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
ISI FG + ++T A ++AI + + G + +P G YLTG+ L S +TL+L
Sbjct: 4 ISILTFGADPSAERISTTAIQQAIAKAKP-----GDSVVIPAGRYLTGAIFLKSDITLHL 58
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
+G+V+ +Q ++PLI + G P G I+ Q+V +TG GT+DGQG
Sbjct: 59 VQGSVLLGSQHLEDYPLIDTRVA-GIDMRWPAG----IINVINAQNVSLTG-TGTLDGQG 112
Query: 159 AIWWN-MWRQRT------------------LPFTRPNLIEFMNSRSIIISNVIFQNSPFW 199
IWW W RP + S++I++ + S FW
Sbjct: 113 RIWWQRFWGDDEHGGMVGDYSANGLRWVVDYDCQRPRNVLVYESKNILLKDFTSCESGFW 172
Query: 200 NIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEY 259
N+H Y +V + ++I+ A P+TDGID DS V IE +S DD + +K+G
Sbjct: 173 NVHLCYSRDVAVENLSIINSA-GPSTDGIDIDSCEQVRIERCTVSCNDDNICIKAGRGRE 231
Query: 260 GIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 319
+ I IR + SGI +GSETSGG+E+VL E+ GVG +K+ R
Sbjct: 232 AAPKARTARAIVIRECVLNKG-SGITLGSETSGGIEHVLIENNRFNGTGVGFRIKSARNR 290
Query: 320 GGFIRNITVSDVYMENARKGIKI------------AGDVGDHPDD------------KFN 355
GGFIR+ITV ++ ++N R + I +G++ D P+
Sbjct: 291 GGFIRHITVRNLLLQNVRFPVLIQLNWFPQYSYGDSGNLQDKPEHWRKLADGVEGEAGLT 350
Query: 356 PNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 401
+ P ++ IT + ++ I+G + P G+ L NI++
Sbjct: 351 EVSHPTLSNITARRSDSNLFSRAFFIEGYPDRPVCGLTLDNISVDA 396
>gi|334124103|ref|ZP_08498112.1| exo-poly-alpha-D-galacturonosidase [Enterobacter hormaechei ATCC
49162]
gi|333389102|gb|EGK60268.1| exo-poly-alpha-D-galacturonosidase [Enterobacter hormaechei ATCC
49162]
Length = 430
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 127/402 (31%), Positives = 187/402 (46%), Gaps = 56/402 (13%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
ISI G + L+T A ++AI Q ++ +PPG +LTG+ L S ++L+L
Sbjct: 4 ISILACGADPTAQRLSTSAIQQAIDNAQQ-----NDVIVIPPGRFLTGALFLKSGVSLHL 58
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
GA + +QD ++PLI + G P G I+ ++V ITG GTIDGQG
Sbjct: 59 DAGAQLVGSQDLADYPLINTRVA-GIDMRWPAG----IINIIECENVSITG-TGTIDGQG 112
Query: 159 AIWWNM-------------WRQRTLPFT------RPNLIEFMNSRSIIISNVIFQNSPFW 199
AIWW + R L + RP I S++I++ + + S FW
Sbjct: 113 AIWWQRFWGDDERSGMVEDYSARGLRWVVDYDCQRPRNILIFESQTILLRDFTSRESGFW 172
Query: 200 NIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEY 259
N+H Y ++ + V I A P+TDGID DS V +E +S DD + +KSG
Sbjct: 173 NMHLCYSRHIEVEGVQISNSA-GPSTDGIDIDSCEQVRVERCIVSCNDDNICIKSGRGYE 231
Query: 260 GIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 319
+ I IR T + SGI +GSETSGG+E VL E GVG +K+ R
Sbjct: 232 AAQKARTARDIVIRGCT-LNKGSGITLGSETSGGIERVLIEDNAFNGTGVGFRIKSARNR 290
Query: 320 GGFIRNITVSDVYMENARKGIKIA------------GDVGDHPDDKFNPNA-------LP 360
GGFIR+I V ++ + + R + I GD+ D P+ A L
Sbjct: 291 GGFIRDIIVQNLRLTDVRFPVLIQLNWFPQYSYGDRGDLADKPEHWRKLAAGVEGDAGLT 350
Query: 361 VVNGITIKDVWGTK-----VQQSGLIQGLKNSPFTGICLSNI 397
VV+G+TI ++ + ++ I+G P G+ L I
Sbjct: 351 VVSGLTINNITARRSDNKCFSRAFFIEGYPERPVAGLTLEGI 392
>gi|390933294|ref|YP_006390799.1| glycoside hydrolase family protein [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389568795|gb|AFK85200.1| glycoside hydrolase family 28 [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 518
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 155/311 (49%), Gaps = 25/311 (8%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
I++ DFG VGDGK ++T + + AI + G +Y P GVYLT L S++T+ L
Sbjct: 84 INVKDFGAVGDGKRIDTFSIQSAI-----MACPDGGRVYFPEGVYLTYPIFLKSNITIEL 138
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRE-----------RPGGRYMSFIHGDGLQDVVI 147
KGAV+ ++ +P+ LP +E + S I G +++V I
Sbjct: 139 GKGAVLLGAKEREMYPI---LPGEIDSQEFSNSYLGSWEGEANDMFASLITGISVENVNI 195
Query: 148 TGENGTIDGQGAI--WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVY 205
G+ G IDG + WW + + + + RP + ++++I + +NSP W IHP+
Sbjct: 196 IGD-GVIDGNSSFDTWWYDAKVKRIAW-RPRTVYLNKCKNVLIEGITIRNSPSWTIHPLM 253
Query: 206 CSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH 265
N+ + I P D+PNTDG+DP+S +V I + S GDD +A+KSG
Sbjct: 254 SQNLKFINLNIENPKDAPNTDGLDPESCKDVLIAGTRFSVGDDCIAIKSGKLSVSQKLPM 313
Query: 266 PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG--GFI 323
PS + IR + +GSE SGGV+NV E+ GI +KT GRG G I
Sbjct: 314 PSENLYIRNCLMEYGHGAVVIGSEMSGGVKNVHVENCVFKKTDRGIRIKTRRGRGKTGII 373
Query: 324 RNITVSDVYME 334
I +++ ME
Sbjct: 374 DEIHAANIKME 384
>gi|383114434|ref|ZP_09935198.1| hypothetical protein BSGG_1394 [Bacteroides sp. D2]
gi|313693859|gb|EFS30694.1| hypothetical protein BSGG_1394 [Bacteroides sp. D2]
Length = 469
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 118/387 (30%), Positives = 182/387 (47%), Gaps = 53/387 (13%)
Query: 41 ITDFGGVGDGKTLNTKAFREAIYR-IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
ITDFG D + EAI + I +GG + VP G + TG L S++ +L
Sbjct: 52 ITDFGAKTDDEA---NPCHEAINQAILQCSLAGGGTVIVPKGTFYTGPVTLKSNVNFHLE 108
Query: 100 KGAVIK-ATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
+GAV+K +T + +P + R I+ G ++ ITG+ G IDGQG
Sbjct: 109 EGAVLKFSTDQSLYFPAVLT-----RWEGIDCYNAHPLIYAYGESNIAITGK-GIIDGQG 162
Query: 159 AI--WWNM-------W-----------RQRTLPF-----------------TRPNLIEFM 181
++ WW M W R+R L + RP L+
Sbjct: 163 SMETWWPMCGAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMKPEDGMRPQLLNLH 222
Query: 182 NSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDS 241
+ +I+I V NSPFW IHP++C ++++ VT+ PN DG DP+S NV IE+
Sbjct: 223 SCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFNRG--PNGDGCDPESCKNVLIENC 280
Query: 242 YISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEH 301
TGDD +A+KSG +E G + PS I +R + G+ +GSE SGG N+ E
Sbjct: 281 TFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGHGGVVIGSEISGGYRNLFVED 340
Query: 302 INLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNAL 359
+ N+ I +KT+ RGG I N+ V +V + R+ + + ++ +K
Sbjct: 341 CRMDSPNLDRVIRIKTSTCRGGLIENVYVRNVTVGQCREAV-LRINLQYENREKCKRGFD 399
Query: 360 PVVNGITIKDVWGTKVQQSGLIQGLKN 386
P+V + +K+V K + LI GL++
Sbjct: 400 PIVRNVHLKNVTCEKSKLGVLIIGLED 426
>gi|281423599|ref|ZP_06254512.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella oris F0302]
gi|281402419|gb|EFB33250.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella oris F0302]
Length = 856
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 123/416 (29%), Positives = 186/416 (44%), Gaps = 65/416 (15%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYR-IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+ IT FG + + +AI+R I +L + GG + VP G + TG+ L S + L
Sbjct: 44 VVITKFGAKTTASAVQNQ---QAIHRAIAYLAKQGGGKVVVPAGKWQTGALRLASGIELV 100
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
++K A+++ D +PL+ Y I+ G DVV++GE GTIDG
Sbjct: 101 VSKDALLQFVFDRSLYPLVKT-----SWEGMMCWNYSPCIYSYGADDVVVSGE-GTIDGG 154
Query: 158 GA--IWWNM----------------------------------WRQRTLPF---TRPNLI 178
G+ WW M W +R RP LI
Sbjct: 155 GSNETWWPMCGKQVFGYVKGVTKEAQVSGSRRRLQQFAEDDVPWDERRFGLGQGLRPQLI 214
Query: 179 EFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCI 238
F+ + +S V +SPFW IHP+ C NV + V I + PN DG DP++ NV I
Sbjct: 215 NFVKGNRVRVSGVTLLHSPFWVIHPLLCKNVTVDGVKIWN--EGPNGDGCDPEACENVLI 272
Query: 239 EDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVL 298
++++ TGDD +A+KSG + G + PS I IR GI +GSE SGG +NV
Sbjct: 273 QNTHFHTGDDCIAIKSGRNNDGRMWNKPSRNIIIRNCVMEDGHGGIVIGSEISGGCKNVY 332
Query: 299 AEHINLYNVGVG--IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNP 356
AE + + + + +KTN RGG I NI + V + ++ + + ++ P++
Sbjct: 333 AEDCTMDSPHLDRVLRIKTNNCRGGRIENINMRRVKVGQCKEAV-VKINLDYEPEEPCYR 391
Query: 357 NALPVVNGITIKDVWGTKVQQSGLIQG-----------LKNSPFTGICLSNINLQG 401
P V + ++DV K LI G LK+ F GI N+ + G
Sbjct: 392 GFEPEVRDVNVEDVTCRKSAYGVLIVGRDSVENVSDIRLKDCVFNGIGRENVRITG 447
>gi|298482142|ref|ZP_07000330.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298271699|gb|EFI13272.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 469
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 126/438 (28%), Positives = 196/438 (44%), Gaps = 64/438 (14%)
Query: 1 MFRFLVTLSILLSYFNCFSLASVVTCSGIVPMRYRNDK-----------ISITDFGGVGD 49
M R + L ++L + + A+ V R +K ITDFG D
Sbjct: 1 MMRRTINLLLMLLFVAEVTFANTVDFDKAFKESARIEKQIKRTSFPKRTFLITDFGAKTD 60
Query: 50 GKTLNTKAFREAIYR-IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIK-AT 107
+ EAI + I SGG + VP G + TG L S++ + +GAV+K +T
Sbjct: 61 DEA---NPCHEAINQAILQCSLSGGGTVIVPKGTFYTGPITLKSNVNFHFEEGAVLKFST 117
Query: 108 QDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAI--WWNM- 164
+ +P + R I+ G ++ ITG+ G IDGQG++ WW M
Sbjct: 118 DQSLYFPAVLT-----RWEGIDCYNAHPLIYAYGESNIAITGK-GIIDGQGSMETWWPMC 171
Query: 165 ------W-----------RQRTLPF-----------------TRPNLIEFMNSRSIIISN 190
W R+R L + RP L+ + +I+I
Sbjct: 172 GAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMKPEDGMRPQLLNLHSCHTILIEG 231
Query: 191 VIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLV 250
V NSPFW IHP++C ++++ VT+ PN DG DP+S NV IE+ TGDD +
Sbjct: 232 VTLLNSPFWVIHPLFCESLIVSGVTVFNRG--PNGDGCDPESCKNVLIENCTFDTGDDCI 289
Query: 251 AVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLY--NVG 308
A+KSG +E G + PS I +R + G+ +GSE SGG N+ E + N+
Sbjct: 290 AIKSGRNEDGRKWNIPSENIIVRGCMMRNGHGGVVIGSEISGGYRNLFVEDCRMDSPNLD 349
Query: 309 VGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIK 368
I +KT+ RGG I N+ V +V + R+ + + ++ +K P+V + +K
Sbjct: 350 RVIRIKTSTCRGGLIENVYVRNVTVGQCREAV-LRINLQYENREKCKRGFDPIVRNVHLK 408
Query: 369 DVWGTKVQQSGLIQGLKN 386
+V K + LI GL++
Sbjct: 409 NVTCEKSKLGVLIIGLED 426
>gi|325105433|ref|YP_004275087.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974281|gb|ADY53265.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 569
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 194/438 (44%), Gaps = 76/438 (17%)
Query: 34 YRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSH 93
++ D + +G DG TLNTK+ AI ++GG ++++ GV+LTG L S+
Sbjct: 55 FKKDTFYVEKYGAKPDGITLNTKSINAAI---DACSKNGGGVVFLGGGVWLTGPIQLKSN 111
Query: 94 MTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGT 153
+ L++ + A++ T+D + L+ G +P S I +++V ITGE G
Sbjct: 112 VNLHVKRDAILLFTKDKSQYKLVE-----GNWEGKPALVNESPISAFNVENVAITGE-GI 165
Query: 154 IDGQGAIWW---------NMWR-------------QRTLP-------------------- 171
IDG G +W + W+ Q +P
Sbjct: 166 IDGSGEVWRLVKKGKLTASQWKNLVASGGVLSKDGQSWMPSESYKKGDEAGNARYFKAGS 225
Query: 172 ----------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 221
F RPNL NS+ I++ V FQNSP W +HP+ ++V+R V + P
Sbjct: 226 KLADYEPMKDFYRPNLFVIANSKRILLEGVTFQNSPAWCLHPLMSEDLVLRNVFVKNPWY 285
Query: 222 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 281
+ N DGID +S NV IE+S GDD + +KSG DE G P+ + +R
Sbjct: 286 AQNGDGIDIESCKNVLIENSTFDVGDDGICIKSGRDEAGRKRAMPTEDVIVRNNVVYHAH 345
Query: 282 SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN------ 335
G +GSE SGG +N+ + + +G+ KT GRGG + N+ +++ YM++
Sbjct: 346 GGFVIGSEMSGGAKNLYVYNNSFIGTDIGLRFKTTRGRGGIVENVYIANSYMKDIPGDAI 405
Query: 336 -------ARKGIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKN 386
A+ + +AG+ P +F P A P IK+V + ++G+
Sbjct: 406 LFDMYYEAKDPVPLAGEKRPAPVAEFKPVTEATPQFKNFYIKNVVCNGADKGLFVRGIPE 465
Query: 387 SPFTGICLSNINLQGVAG 404
I L ++ L+ G
Sbjct: 466 MNVQNIYLEDLTLEAKTG 483
>gi|322436856|ref|YP_004219068.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321164583|gb|ADW70288.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 414
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 118/380 (31%), Positives = 184/380 (48%), Gaps = 40/380 (10%)
Query: 41 ITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAK 100
+ G GDG T +T+A ++AI + SGG +L+G + S +TL +
Sbjct: 25 VKTMGAKGDGVTKDTEAIQKAIDTCTVVTLSGGK--------FLSGPLEIKSGVTLDVET 76
Query: 101 GAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAI 160
GA++ + D ++ + +P + F+H +V ITG GTIDGQG +
Sbjct: 77 GAMLLGSTDRADYKAATLM-------RQP--TVLPFLHIVNADNVKITG-GGTIDGQGKV 126
Query: 161 WWNMWRQRTLP------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
WW+ + RP + +S+ + + N+ QN+ FW + P Y +V ++
Sbjct: 127 WWDYVKGAKDAGVLGNDHPRPMGLLIDHSKHVTVENITIQNAGFWQVVPYYSDYLVFSHL 186
Query: 215 TILAPAD-SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIR 273
+LAP +PNTDGIDP SSS++ I+ + S GDD +A+KSG PS I I
Sbjct: 187 RVLAPQRGAPNTDGIDPFSSSHIKIDHYFSSVGDDNIAIKSGAIN-SPGPDAPSEDIVIT 245
Query: 274 RVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
S G+++GSE +GGV +V AE I+ GI VK N RG ++T D+ M
Sbjct: 246 DCIFESGH-GLSIGSEIAGGVHHVHAERISFKGTDQGIRVKANRDRGNDTSDLTFKDITM 304
Query: 334 ENARKGIKIA---------GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGL 384
++ R I I+ G+V P + P+ + I I++V +G+I GL
Sbjct: 305 DDVRTSILISEYYPKAMPEGEVASAPITRLTPH----FHDIHIENVKSVNSDWAGVIVGL 360
Query: 385 KNSPFTGICLSNINLQGVAG 404
SP T I L N+++Q G
Sbjct: 361 PESPVTDISLKNVSIQAKKG 380
>gi|317503775|ref|ZP_07961787.1| glycoside hydrolase [Prevotella salivae DSM 15606]
gi|315665072|gb|EFV04727.1| glycoside hydrolase [Prevotella salivae DSM 15606]
Length = 856
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 131/456 (28%), Positives = 196/456 (42%), Gaps = 72/456 (15%)
Query: 6 VTLSILLSYFNCFSLASVVTCS-------GIVPMRYRNDKISITDFGGVGDGKTL-NTKA 57
++L I +F F+L S I + + + IT FG N +A
Sbjct: 4 LSLLIFFVFFPLFALGDGWNESEYQAIEHAIEQPKIADRSVVITKFGAKTTASAAQNQRA 63
Query: 58 FREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIA 117
++AI L R GG + VP G + TG+ L+S + L ++K A+++ + +PL+
Sbjct: 64 IQKAI---AFLARQGGGKVVVPAGKWHTGALRLSSGIELVVSKDALLQFVFERSLYPLVK 120
Query: 118 PLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGA--IWWNM----------- 164
Y I+ G DVV++GE GTIDG G+ WW M
Sbjct: 121 T-----SWEGMMCWNYSPCIYSFGSDDVVVSGE-GTIDGGGSNETWWPMCGKEVFGYVKG 174
Query: 165 -----------------------WRQRTLPF---TRPNLIEFMNSRSIIISNVIFQNSPF 198
W +R RP LI F+ + +S V NSPF
Sbjct: 175 VTKEAQVLGSRRRLQQMAEDDVPWDERRFGLGYGLRPQLINFVKGNRVRVSGVTLLNSPF 234
Query: 199 WNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDE 258
W IHP+ C NV + V I + PN DG DP++ NV I++++ TGDD +A+KSG +
Sbjct: 235 WVIHPLQCKNVTVDGVKIWN--EGPNGDGCDPEACENVLIQNTHFHTGDDCIAIKSGRNN 292
Query: 259 YGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVG--IHVKTN 316
G + PS I IRR GI +GSE SGG NV AE + + + + +KTN
Sbjct: 293 DGRLWNQPSKNIIIRRCVMEDGHGGIVIGSEISGGCMNVFAEDCTMDSPHLDRVLRIKTN 352
Query: 317 IGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQ 376
RGG I NI V V + ++ + + ++ P + P V + ++ V K
Sbjct: 353 NCRGGRIENINVRRVKVGQCKEAV-VKINLDYEPQEPCYRGFEPEVRNVNVEQVTCQKSA 411
Query: 377 QSGLIQG-----------LKNSPFTGICLSNINLQG 401
LI G LK+ F GI ++ + G
Sbjct: 412 YGVLIVGRDSVENVSDIRLKDCEFNGISKQDVRITG 447
>gi|388256014|ref|ZP_10133195.1| polygalacturonase, putative, pga28A [Cellvibrio sp. BR]
gi|387939714|gb|EIK46264.1| polygalacturonase, putative, pga28A [Cellvibrio sp. BR]
Length = 505
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/424 (28%), Positives = 182/424 (42%), Gaps = 57/424 (13%)
Query: 21 ASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPP 80
A + + P+ + + DFG DGK NT+AF AI +
Sbjct: 71 AEAIRAQVVAPV-FPERSFDVRDFGAKADGKHNNTQAFAAAIKACHDAGGGKVVVAGGD- 128
Query: 81 GVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGD 140
YL+G +L S++ L++A+GA I D + + + + G E G Y I+
Sbjct: 129 --YLSGPIHLLSNINLHVAEGARILFITDPSAY--LPAVFTRWEGMELMG--YSPLIYAY 182
Query: 141 GLQDVVITGENGTIDGQG--AIWW----------NMWRQRTLP----------------- 171
G ++ ITG+ G +DGQ WW W +P
Sbjct: 183 GQTNIAITGK-GVLDGQANRTTWWPWKGGAWKGGTDWSMPGVPTQDAARDKLMQDMENGV 241
Query: 172 -----------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA 220
+ RP I+ ++++I V N+PFW ++PV C NV + V + +
Sbjct: 242 PVAERMYADGAYLRPPFIQPYACKNVLIEGVTITNAPFWLLNPVLCENVTVDGVNCI--S 299
Query: 221 DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP 280
PN+DG DP+S NV I++ TGDD +A+KSG + G P+ I I
Sbjct: 300 HGPNSDGCDPESCKNVVIKNCLFDTGDDCIAIKSGRNADGRRLNTPTENIVISHCKMREG 359
Query: 281 FSGIAVGSETSGGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARK 338
G+ +GSE SGGV NV EH + N+ GI +KTN RGG I N + D+ +
Sbjct: 360 HGGVVIGSEISGGVRNVFVEHCEMSSPNLDRGIRIKTNSVRGGVIENFFIRDITIGEVTT 419
Query: 339 GIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNIN 398
I I D + KF P V I I+++ + ++G K SP + L+N +
Sbjct: 420 AIVIDFDYEEGDAGKFT----PTVRNIDIRNLHCENAKHVFQVRGYKRSPIQNLHLTNCH 475
Query: 399 LQGV 402
+ V
Sbjct: 476 FKQV 479
>gi|189459631|ref|ZP_03008416.1| hypothetical protein BACCOP_00257 [Bacteroides coprocola DSM 17136]
gi|189433713|gb|EDV02698.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 535
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/430 (27%), Positives = 187/430 (43%), Gaps = 82/430 (19%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
SIT+FG V DG TLNT+AF +AI + + GG + VP G++LTG L S++ LYL
Sbjct: 60 SITEFGAVADGITLNTEAFDKAI---KAVAEKGGGKVIVPAGLWLTGPIVLQSNINLYLE 116
Query: 100 KGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGA 159
+ A++ T D +P++ S+ R R S I +++ ITG+ G +DG G
Sbjct: 117 ENALVLFTADHTQYPIVKT--SFEGLETR---RCQSPISALNAENLAITGK-GVMDGNGD 170
Query: 160 IW---------WNMWRQ------------------------------------------- 167
W N W++
Sbjct: 171 TWRPVKKGKMTANQWKKLVDSGGVLDESGRIWYPSEGSIKGAMACKNFNVPEGINTDEEW 230
Query: 168 -RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 226
+ RP L+ F+ + +++ V F+NSP W +HP+ C ++ I +++ P S N D
Sbjct: 231 NSIRDWLRPVLLSFIKCKKVLLEGVTFKNSPSWCLHPLSCEDITINNISVSNPWYSQNGD 290
Query: 227 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 286
+D +S + I++S GDD + +KSG DE G G P + IR G V
Sbjct: 291 ALDLESCNRALIQNSSFDAGDDGICIKSGKDEDGRRRGEPCQNVIIRNNVVLHGHGGFVV 350
Query: 287 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT--------------VSDVY 332
GSE SGGV+N+ ++ VG+ K+ GRGG + NI + D++
Sbjct: 351 GSEMSGGVKNIYVDNCTFLGTDVGLRFKSTRGRGGVVENIHINNINMINIPNEGLIFDLF 410
Query: 333 MENARKGIKIAGDVGDHPDDKFNP---NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPF 389
G GD ++P ++ P P I IK+V V ++ L GL P
Sbjct: 411 YGGKAPG---EGDGYNNPTEQKIPAVTEETPAFRDIFIKNVTAKNVGRAILFNGLPEMPI 467
Query: 390 TGICLSNINL 399
I + N+ +
Sbjct: 468 KNIHIENVTM 477
>gi|409198539|ref|ZP_11227202.1| glycoside hydrolase [Marinilabilia salmonicolor JCM 21150]
Length = 531
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/329 (33%), Positives = 169/329 (51%), Gaps = 48/329 (14%)
Query: 41 ITDFGGVGDGKTLNTKAFREAIYR-IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
I DFG K N +AI+R I +GG + +P G +LTG +L S++ L+L
Sbjct: 68 IRDFGA--RQKNNNNHKSTDAIHRAIDAATTAGGGKVLIPRGNWLTGPIHLKSNINLHLE 125
Query: 100 KGAVIKATQDTWNW-PLIAPLPSYGRGRERPGG----RYMSFIHGDGLQDVVITGENGTI 154
+GA + ++D ++ P++ + R G Y S I+ +++V ITG+ G +
Sbjct: 126 EGASLYFSEDKEDYLPVV---------KHRYEGVETYNYSSLIYAKNIENVAITGK-GIL 175
Query: 155 DGQGAIW--WNMWRQRT----LPFTR--------------PNLIEFMNSRSIIISNVIFQ 194
+GQG W W + R +P +R P+ + F S++I I + +
Sbjct: 176 EGQGEHWLKWGTVQPRATATKVPLSRRKNFGKGAGKEGMRPSFVVFWKSKNIFIEGITLR 235
Query: 195 NSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKS 254
SP WNIH +Y S++V+R +TI + +S N DGI DSSS+ +E +++STGDD + +KS
Sbjct: 236 ESPMWNIHLIYSSHIVVRDITINS-VESHNGDGIVLDSSSDALLEYNHLSTGDDAIVLKS 294
Query: 255 GWDEYGIAYGHPSSGITIRRV------TGSSPFSGIAVGSETSGGVENVLAEHINLYNVG 308
G++E G+ P+ + IR TGS G+ GSETSGG+ N+
Sbjct: 295 GFNEEGLEINIPTENVVIRNYYAYDVRTGS---GGVVFGSETSGGIRNIYVHDALFEKCD 351
Query: 309 VGIHVKTNIGRGGFIRNITVSDVYMENAR 337
GI KT GRG NI +SDV M+N R
Sbjct: 352 RGIRFKTARGRGNITENIIISDVQMKNIR 380
>gi|325298060|ref|YP_004257977.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324317613|gb|ADY35504.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 462
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 126/399 (31%), Positives = 177/399 (44%), Gaps = 67/399 (16%)
Query: 41 ITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVY-LTGSFNLTSHMTLYLA 99
IT FG GDGK AF +A+ R +SGG + VP G Y L G + S++ L L
Sbjct: 50 ITSFGAKGDGKKDCKPAFDKAMKRAA---KSGGAHIVVPAGEYKLNGPIHFVSNVCLELQ 106
Query: 100 KGAVIKATQDTWNWPLIAPLPSYGRGRERPG------GRYMSFIHGDGLQDVVITGENGT 153
+GAV+K AP P Y + Y FI+G L+++ I G+ GT
Sbjct: 107 EGAVLK----------FAPEPEYYLPLVKTSWEGTFLQNYSPFIYGYQLENISIIGK-GT 155
Query: 154 IDGQGAIWWNMWRQRTLP------------------------FTRPNLIEFMNSRSIIIS 189
IDG + W+ + + RP LI+F ++I +
Sbjct: 156 IDGNAGSTFATWKSQQKKGQQLSRDMNHNETPVEERNFGEGYYLRPQLIQFFACKNITLE 215
Query: 190 NVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDL 249
V NSPFW IH + N++ R + A N DGIDP+ + N+ IE+ + GDD
Sbjct: 216 GVFITNSPFWCIHLLKSENIICR--GLRYDAKLVNNDGIDPEFTRNLLIENIEFNNGDDN 273
Query: 250 VAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYN-VG 308
VA+K G D G PS I IR G+ +GSE S GV+NV E+
Sbjct: 274 VAIKCGRDNDGWTTARPSENIIIRNCKFKG-LHGVVLGSEMSAGVQNVFIENCTYGGYCK 332
Query: 309 VGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGD-------HPDDKFNPNALPV 361
GI++KTN RGGFIRNI Y+ N R G+V D + + +
Sbjct: 333 RGIYIKTNPDRGGFIRNI-----YVNNCR-----FGEVEDLFYATSMYAGEGMDNTHFTE 382
Query: 362 VNGITIKDVWGTKVQQSGLI-QGLKNSPFTGICLSNINL 399
V+ I +KDV K + L+ QG P + N+N+
Sbjct: 383 VHDIYVKDVTCQKASAAALVLQGTTVKPIYNVRFENVNV 421
>gi|349858579|gb|AEQ20324.1| endopygalactorunase [uncultured bacterium CSLG10]
Length = 452
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/402 (30%), Positives = 189/402 (47%), Gaps = 46/402 (11%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R + D+G GDG T NT A + AI ++GGT+++ GVYLTGS L S
Sbjct: 21 RAAEFRANDYGAKGDGVTANTVAIQSAI---DAAAKTGGTIVFAS-GVYLTGSIFLKSGT 76
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
L + KG I+ QD +P++ P G + P + I+ +V I+G+ G I
Sbjct: 77 RLRVDKGVEIRGMQDQAAYPVM-PTRIAGIEMKWPA----ALINVYEQSNVKISGQ-GVI 130
Query: 155 DGQGAIWWNMWRQRTLPFT-------------RPNLIEFMNSRSIIISNVIFQNSPFWNI 201
DG G +WW+ + Q + RP LI+ S ++ + + + S FW +
Sbjct: 131 DGDGKMWWDKYWQVRKDYEPKGLRWAADYDTPRPRLIQIYKSDNVELQGLTLRRSGFWTV 190
Query: 202 HPVYCSNVVIRYVTIL--APADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEY 259
H Y V + VTI P+TDGID DSSS+V ++++ I DD + +K+G D
Sbjct: 191 HICYSRKVTVDGVTIRNNIGGRGPSTDGIDVDSSSDVLVQNADIECNDDAIVMKAGRDAD 250
Query: 260 GIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHIN-LYNVGVGIHVKTNIG 318
G+ P+ + I VT +GI GSETSGG+ +V A I+ L +GI K+
Sbjct: 251 GLRVNRPTENVVIHDVTVRDGAAGITFGSETSGGIRHVEAYRIHVLAPSPIGILFKSAAT 310
Query: 319 RGGFIRNITVSDVYMENARKGI-------------KIAGDVGDHPD-----DKFNPNA-- 358
RGG + +I++ D+ M N KI + + PD + P A
Sbjct: 311 RGGTVEDISIHDIDMRNVPTAFSVNFNWNPNYSYAKIPQGLQNVPDYYKVMTQEVPRAQG 370
Query: 359 LPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 400
LP + I I ++ + Q+ + ++P G+ NI++Q
Sbjct: 371 LPHLKNIRISNIKASGSTQAFSVGAYADAPLQGVTFRNIDIQ 412
>gi|347530390|ref|YP_004837153.1| glycoside hydrolase family protein [Roseburia hominis A2-183]
gi|345500538|gb|AEN95221.1| glycoside hydrolase family protein [Roseburia hominis A2-183]
Length = 382
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 178/372 (47%), Gaps = 39/372 (10%)
Query: 54 NTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNW 113
N +EA+ R L SGGT++ VP G + +G+ +L S++ LYL +G VI + ++
Sbjct: 11 NQNVIQEAVDR---LPASGGTVI-VPRGEWKSGAIHLKSNVKLYLEEGCVIHFSSCMEDY 66
Query: 114 PLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQ------ 167
+ P+ + G E Y I+ ++V I G G +DG G+ WW+ W++
Sbjct: 67 --LPPVFTRWEGVE--CYNYSPLIYAADCENVTICG-TGVLDGAGSAWWH-WKKLQQNAA 120
Query: 168 --------RTLPFT-----------RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 208
+ +P RP+ I+F+N + + + + ++ P W IHPVYC +
Sbjct: 121 DHLIRAESQEIPVEERIFATRKDALRPSFIQFINCKHVTLEDFTIEDGPQWTIHPVYCED 180
Query: 209 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 268
VV+R VT+ PNTDG +PDS V IED TGDD +A+ SG +E G G P
Sbjct: 181 VVVRGVTV--NTKGPNTDGCNPDSCRKVLIEDCTFETGDDCIAINSGMNEDGWRVGRPCE 238
Query: 269 GITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITV 328
I ++ + +A+GS SGG+ ++ GI +K+ GRGG+++ + V
Sbjct: 239 QIEVKNCRFIGGHAAVAIGSGMSGGICDIWIHDCVARGTERGIRIKSMRGRGGYVKRVNV 298
Query: 329 SDVYMENARK-GIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS 387
+ M+ K I+++ + G + A P + + + G + GL S
Sbjct: 299 ERMQMDEIEKEAIEVSMNYGSSTAVPVSQKA-PEFSELRFAHIRGNHAAIGVSLCGLPES 357
Query: 388 PFTGICLSNINL 399
P I L ++++
Sbjct: 358 PLREITLEDVSI 369
>gi|419720997|ref|ZP_14248200.1| pectate lyase family protein [Lachnoanaerobaculum saburreum F0468]
gi|383302819|gb|EIC94301.1| pectate lyase family protein [Lachnoanaerobaculum saburreum F0468]
Length = 526
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 182/386 (47%), Gaps = 31/386 (8%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+++ DFG +GDG L++ + AI + GT+ Y+P G YL L S++ +++
Sbjct: 83 LNVKDFGALGDGSGLDSGYIQAAI----NACPKDGTV-YIPKGKYLCTPVFLKSNIDIWI 137
Query: 99 AKGAVIKATQDTWNWPLI-APLPSYGRGRE--------RPGGRYMSFIHGDGLQDVVITG 149
K A++ +D +P++ + S +E P + + I G +++V I G
Sbjct: 138 DKDAILIGEKDRKKYPILPGMIESSDEKKEYNIGSWEGNPLDCFAALITGISVENVHIYG 197
Query: 150 ENGTIDGQGAI--WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCS 207
E G +DG ++ WW +++ + + RPN + N ++I + + NSP W +HP Y
Sbjct: 198 E-GILDGNASMLDWWKDAKKKNIAW-RPNTVFLHNCKNIAMQGLCIMNSPSWTVHPYYSD 255
Query: 208 NVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPS 267
N++ TI+ P +SPNTDG+DP+S NV I + IS GDD VA+KSG + + P+
Sbjct: 256 NLLFLNNTIMNPDNSPNTDGLDPESCENVLILGADISVGDDCVAIKSGKYYMALKHYKPA 315
Query: 268 SGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG--GFIRN 325
I IR + +GSE + GV +V E G+ +KT GRG + N
Sbjct: 316 KNIVIRNSIFRKGHGSVTIGSEVAAGVYDVSVEKCIFEGTDRGLRIKTRRGRGEKSVLDN 375
Query: 326 ITVSDVYMENA----RKGIKIAGDVGDHPD-----DKFNPNA-LPVVNGITIKDVWGTKV 375
I ++ M++ + D H D DK N P + I +D+ V
Sbjct: 376 ICFENILMKDVCMPFTANMFYFCDPDGHSDYVQNQDKMEVNEKTPKIGKIAARDIRCENV 435
Query: 376 QQ-SGLIQGLKNSPFTGICLSNINLQ 400
+ + GL P I L NI L
Sbjct: 436 KNIFACLYGLPEMPVEEIVLENITLN 461
>gi|373954236|ref|ZP_09614196.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373890836|gb|EHQ26733.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 545
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 159/355 (44%), Gaps = 62/355 (17%)
Query: 34 YRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSH 93
++ D +I +G V DG TLNTK+ AI ++GG ++ +P G+++TG L S+
Sbjct: 39 FKKDTFNIIKYGAVADGITLNTKSINNAI---DACSKNGGGVVLIPQGLWMTGPIVLKSN 95
Query: 94 MTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGT 153
+ L++ + A+++ T D +PL+ G R S + G L ++ ITG G
Sbjct: 96 VNLHIDRAAMVQMTDDKSQYPLVE-----GNYEGHAAVRNQSPVSGTNLVNIAITG-GGI 149
Query: 154 IDGQGAIWWNM----------WRQ------------------------------------ 167
IDG G W W++
Sbjct: 150 IDGNGTGVWRAIGKDRLTESEWKELVASGGVVSENGKSWYPSQSYAKGNAIKDVSLLKPG 209
Query: 168 RTLP-------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA 220
++L + RPN++ + I++S FQNSP W +H + C ++ ++ V + P
Sbjct: 210 KSLSDYEEYKDYFRPNMVVLTGCKKILLSGTTFQNSPNWCLHTLLCEDLTLQDVHVRNPW 269
Query: 221 DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP 280
++ N D ID +S NV +E+S GDD + +KSG DE G G P+ + +R
Sbjct: 270 NAQNGDAIDVESCRNVLVENSTFDAGDDGLCIKSGRDEEGRKRGVPTENVVMRNNIVYRA 329
Query: 281 FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 335
G +GSE SGG N+ +G+ KT GRGG + NI + ++ M +
Sbjct: 330 HGGFVIGSEMSGGARNIFVSDCTFIGTDIGLRFKTARGRGGIVENIYIKNISMRD 384
>gi|212695103|ref|ZP_03303231.1| hypothetical protein BACDOR_04641 [Bacteroides dorei DSM 17855]
gi|212662419|gb|EEB22993.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 532
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/306 (33%), Positives = 156/306 (50%), Gaps = 26/306 (8%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+I DFG VGDGK+L+TKA ++AI + G ++ VP GVYLTG+ S+MTLY+
Sbjct: 118 FNIKDFGAVGDGKSLDTKAIQQAI---DACNKQG--IVVVPKGVYLTGALFFKSYMTLYI 172
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHG-----DGLQDVVITGENGT 153
+GA++K + D ++P++ R G +Y S I+G G+Q+ I G+ G
Sbjct: 173 EEGAILKGSSDLAHYPIVRS-----RFEGIEGSQYASLINGGTLLSGGIQEFSIRGK-GI 226
Query: 154 IDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRY 213
ID G N ++ L + R ++ MN +I + V F SP W +H +YC V I+
Sbjct: 227 IDANGENLINQQKKEGLGY-RGRILSLMNGENICLEGVTFLQSPAWGVHFIYCMGVTIKD 285
Query: 214 VTILAPADSP--------NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH 265
V I D N DG+ DSS ++ + ++ IS+ DD V++KSG D G
Sbjct: 286 VYINTRFDPETGRKYKIHNGDGLTIDSSKDIVVYNTTISSQDDNVSIKSGRDNDGRRVAK 345
Query: 266 PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRN 325
+ + + F G+ VGSE +G V NVL + N +K GRGG I N
Sbjct: 346 STDNVKLFDCKFLGGF-GVVVGSEMAGNVRNVLVNNCFYENTACVSQLKAPWGRGGVIEN 404
Query: 326 ITVSDV 331
IT ++
Sbjct: 405 ITFKNI 410
>gi|340751772|ref|ZP_08688582.1| glycoside hydrolase [Fusobacterium mortiferum ATCC 9817]
gi|229420732|gb|EEO35779.1| glycoside hydrolase [Fusobacterium mortiferum ATCC 9817]
Length = 512
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 180/394 (45%), Gaps = 32/394 (8%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+++ FG GDG + +T A + AI R +Y+P G YL S L ++T+ L
Sbjct: 81 LNVKRFGAKGDGVSNDTLALQTAIMSCPENGR-----VYIPKGKYLITSLFLKDNLTIEL 135
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRE--------RPGGRYMSFIHGDGLQDVVITGE 150
+GA + N+ ++ L + E P + S I G +++V I G
Sbjct: 136 GEGAELLGDTKRENFGILPGLIDNDKNEEYYLGSWEGNPLDSFTSLITGINVKNVRIIGR 195
Query: 151 NGTIDGQGAI--WWNMWRQRTLPFTRPNLIEFMNS-RSIIISNVIFQNSPFWNIHPVYCS 207
G ++GQ + WW + + + + RP I F+NS +++I + NSP W IHP +
Sbjct: 196 -GCLNGQASKENWWKNPKVKNIAW-RPRSI-FLNSCENVVIEGIKIMNSPSWTIHPFLTN 252
Query: 208 NVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPS 267
N+ + I PADSPNTDGIDP+S NV S GDD +A+KSG G PS
Sbjct: 253 NLRFINLKIENPADSPNTDGIDPESCENVEYIGIDFSVGDDCIAIKSGKLYLGKVLNKPS 312
Query: 268 SGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG--GFIRN 325
I+ + G+ +GSE SGGVEN+ E + Y GI +KT GRG G I
Sbjct: 313 KNFIIKNCSMKYGHGGVVIGSEMSGGVENINIEKCDFYKTDKGIRIKTRRGRGENGVIDG 372
Query: 326 ITVSDVYMENARKGIKIAGDVGDHPDDK----FNPNALPV------VNGITIKDVWGTK- 374
I V ++ M+ + PD K + LPV + I+ +++
Sbjct: 373 IYVKNISMKEVKVPFVFNSFYFCDPDGKTEYVYTKEKLPVDERTPSIKNISFENIKAEDT 432
Query: 375 VQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSP 408
+ +G + GL P + N+ + G +P
Sbjct: 433 LVCAGFLYGLPEKPIENVKFKNVEVDFKDGEVTP 466
>gi|304317802|ref|YP_003852947.1| glycoside hydrolase family protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779304|gb|ADL69863.1| glycoside hydrolase family 28 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 519
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 117/385 (30%), Positives = 181/385 (47%), Gaps = 30/385 (7%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
I++ DFG GDGK ++T + + AI + G ++ P G+YLT L S++TL L
Sbjct: 84 INVRDFGANGDGKRIDTFSIQAAI-----ISCPDGGRVFFPEGIYLTYPLFLKSNITLEL 138
Query: 99 AKGAVIKATQDTWNWPLI-------APLPSY-GRGRERPGGRYMSFIHGDGLQDVVITGE 150
KGAV+ ++ +P++ SY G + S I G G+++V I GE
Sbjct: 139 GKGAVLLGAKEREMYPILPGEIDCKKIEDSYLGSWEGEAKEIFASLITGIGVENVNIIGE 198
Query: 151 NGTIDGQGAI--WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 208
GTIDG + WW+ + + + + RP I ++++I + +NSP W IHP+ N
Sbjct: 199 -GTIDGNSSFDTWWHDAKVKRIAW-RPRTIFLNKCKNVLIEGITIKNSPSWTIHPLLSQN 256
Query: 209 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 268
+ + I P D+PNTDG+DP+S +V I + S GDD +A+KSG S
Sbjct: 257 LKFINLNIENPKDAPNTDGLDPESCKDVVILGTRFSVGDDCIAIKSGKLATSRKLPVSSE 316
Query: 269 GITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG--GFIRNI 326
+ IR + +GSE SGGV+NV + GI +KT GRG G I I
Sbjct: 317 NLYIRNCLMEYGHGAVVIGSEMSGGVKNVHVDRCVFRKTDRGIRIKTRRGRGSTGIIDEI 376
Query: 327 TVSDVYMENARKGIKIAGDVGDHPDDK----FNPNALPV------VNGITIKDVWGTKVQ 376
S++ M+ I D K ++ LPV + I +KD+ Q
Sbjct: 377 HASNIKMDKVLTPFTINSFYFCDEDGKTEYVWSKEKLPVDDRTPYIGNIYLKDITCNDTQ 436
Query: 377 -QSGLIQGLKNSPFTGICLSNINLQ 400
+G + GL + + NI ++
Sbjct: 437 VAAGYMYGLPERKIEKVTMENIYIK 461
>gi|90020600|ref|YP_526427.1| glycoside hydrolase family protein [Saccharophagus degradans 2-40]
gi|89950200|gb|ABD80215.1| polygalacturonase-like protein [Saccharophagus degradans 2-40]
Length = 463
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 190/392 (48%), Gaps = 53/392 (13%)
Query: 34 YRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSH 93
+ N + ++ +FGG + NT AF++AI ++GG + VP G + TG+ +L S+
Sbjct: 48 FPNKEFNLLEFGG--KEGSDNTLAFKKAI---AACSKAGGGKVVVPAGRFETGAIHLESN 102
Query: 94 MTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGT 153
+ L++++GA I D + L A + G E G Y I+ G ++ ITG+ GT
Sbjct: 103 VNLHISEGATIAFFTDP-KYYLPAVFTRW-EGMECMG--YSPLIYAYGKTNIAITGK-GT 157
Query: 154 IDGQG--AIWW-----NMW-------------------------RQRTLP---FTRPNLI 178
+DGQ WW W R+R + RP+ +
Sbjct: 158 LDGQADPTHWWAWKGNKEWGVEGYPSQKESRNQLFAQAEAGDPVRERVYADGHYLRPSFV 217
Query: 179 EFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCI 238
+ +++I ++ N+PFW +HP NV +R V + + PN+DG DP+S NV I
Sbjct: 218 QPYKCENVLIEDITIINAPFWLLHPTLSQNVTVRGVHL--ESLGPNSDGCDPESCKNVVI 275
Query: 239 EDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVL 298
E+ + +TGDD +A+KSG + G P+ + IR + G+ +GSE SGGV NV
Sbjct: 276 ENCFFNTGDDCIAIKSGRNNDGRRLATPTENVIIRNCKMEAGHGGVVIGSEISGGVRNVF 335
Query: 299 AEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNP 356
AE+ ++ ++ GI +KTN RGG + NI V + + ++ I I + KF+
Sbjct: 336 AENNVMSSPDLEKGIRIKTNSVRGGLLENIYVRNCTIGEVQQAIVINFQYEEGDAGKFD- 394
Query: 357 NALPVVNGITIKDVWGTKVQQSGLIQGLKNSP 388
P V + I+++ Q I+G + +P
Sbjct: 395 ---PTVRNVEIRNLVCQHALQVFNIRGFERAP 423
>gi|408672530|ref|YP_006872278.1| glycoside hydrolase family 28 [Emticicia oligotrophica DSM 17448]
gi|387854154|gb|AFK02251.1| glycoside hydrolase family 28 [Emticicia oligotrophica DSM 17448]
Length = 789
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 125/452 (27%), Positives = 204/452 (45%), Gaps = 83/452 (18%)
Query: 34 YRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSH 93
+R D +I+ +G DG T+NTKA +AI + +GG + VP G+++TG L S+
Sbjct: 274 FRKDTFNISRYGAKADGITVNTKAINQAI---EICNAAGGGTVLVPKGLWVTGPIVLKSN 330
Query: 94 MTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGT 153
+ L+L KGA+++ +++ ++P++ L ++ G+E R + I G L+++ ITGE G
Sbjct: 331 VNLHLEKGALLQFSKNYDDYPIV--LTTW-EGQE--SYRCQAPIWGVDLENIAITGE-GV 384
Query: 154 IDGQGAIW------------W--------------NMW--RQRTLP-------------- 171
+DG G W W N W +++L
Sbjct: 385 LDGGGDAWRAIKREKQTAGQWANLIKSGGVVDEKQNNWYPSEKSLKGNMIPNAGRILNGV 444
Query: 172 ------------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP 219
F RPN++ ++III V FQNSP W +HP+ C ++ ++ V + P
Sbjct: 445 KPTPEELASYKDFLRPNMLSLTRCKNIIIEGVTFQNSPAWTMHPLLCEHITVKNVNVSNP 504
Query: 220 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS 279
+ N+D ID +S N +E STGDD + +KSG DE G G P+ I+
Sbjct: 505 WYAQNSDAIDLESCRNGVLEGCTFSTGDDGITIKSGRDEQGRKRGVPTENFVIKDCIVYH 564
Query: 280 PFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN---- 335
G +GSE SGGV N+ VG+ KT GRGG + NI V+++ M +
Sbjct: 565 AHGGFVIGSEMSGGVRNMFISDCTFMGSDVGLRFKTARGRGGVVNNIYVNNINMTDIPGE 624
Query: 336 ---------ARKGIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGL 384
A+ ++ G + P K P P I+++ + + LI+GL
Sbjct: 625 AVLFDMYYAAKDPVRADGKENELPVIKAEPLGEGTPQFKDFYIQNIVCKGAETAILIRGL 684
Query: 385 KNSPFTGICLSNINLQGVAGPTSPPLKCSDVS 416
+ + NIN++ + L C +
Sbjct: 685 PE-----MTIKNINIENAMIEANKGLVCVEAE 711
>gi|329960859|ref|ZP_08299138.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328532145|gb|EGF58949.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 488
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 183/387 (47%), Gaps = 53/387 (13%)
Query: 41 ITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAK 100
ITDFG D T ++ E I +GG + VP G + TG L S++ ++ +
Sbjct: 71 ITDFGAKPD--TPDSPCHEEINRAIVTCSLNGGGTVIVPKGTFYTGPITLKSNVNFHVEE 128
Query: 101 GAVIK-ATQDTWNWP-LIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
GA +K +T + +P +I RP I+ G ++ ITG+ GTIDGQG
Sbjct: 129 GATLKFSTDQSLYFPGVITRWEGLDCYNARP------LIYAYGETNIAITGK-GTIDGQG 181
Query: 159 A--IWWNM-------W-----------RQRTLPF-----------------TRPNLIEFM 181
+ WW M W R+R L + RP L+
Sbjct: 182 SKETWWPMCGAPRYGWKEGMVAQRNGGRERLLMYGETSTPIYKRVMKPEDGLRPQLVNLY 241
Query: 182 NSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDS 241
+ +++I ++ NSPFW IHP++C ++ +R V + PN DG DP+S NV IE+
Sbjct: 242 SCNTVLIEDITLLNSPFWVIHPLFCESLTVRGVKVFNRG--PNGDGCDPESCKNVLIENC 299
Query: 242 YISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEH 301
TGDD +A+KSG + G + PS I +R + G+ +GSE SGG N+ E+
Sbjct: 300 TFDTGDDCIAIKSGRNADGRKWNIPSENIIVRNCFMKNGHGGVVIGSEISGGYRNLYVEN 359
Query: 302 INLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNAL 359
+ N+ I +KT+ RGG I N+ V +V + R+ + + ++ +K + +
Sbjct: 360 CQMDSPNLDRVIRIKTSTCRGGIIENVFVRNVTVGQCREAV-LRINLQYENREKCDRSFP 418
Query: 360 PVVNGITIKDVWGTKVQQSGLIQGLKN 386
PVV + +K+V K + LI GL +
Sbjct: 419 PVVRNVHLKNVTCEKSKLGILIIGLDD 445
>gi|329962597|ref|ZP_08300545.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328529628|gb|EGF56526.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 454
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 198/405 (48%), Gaps = 55/405 (13%)
Query: 29 IVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVY-LTGS 87
I+P + + ++TD+G D + A EAI + + GGT+L +P G Y + G+
Sbjct: 39 IIPPTFPDSTYNVTDYGAKNDTAFDSRPAILEAINKCN--QNGGGTVL-IPAGNYFIKGA 95
Query: 88 FNLTSHMTLYLAKGAVIKATQDTWNW-PLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVV 146
L S++ L++ +GA ++ + ++ P++ + G E Y FI+ +V
Sbjct: 96 ITLKSNVNLHIVEGARLEFSTAASDYLPMVL---TKWEGTE--CFNYTPFIYAYQCTNVA 150
Query: 147 ITGENGTIDGQGAIWWNMWRQRTLP------------------------FTRPNLIEFMN 182
+TG+ GT+DG GA+ +N W + P + RP +I+F
Sbjct: 151 LTGK-GTLDGNGAVTFNGWHAKQGPAVDRLRQMGIDSIPVYERVFGEGYYLRPCMIQFYG 209
Query: 183 SRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSY 242
+++++ +V +SPFW IHPV+C+NV +R + I +++ N DG DP+S +NV IE+
Sbjct: 210 CKNVLVEDVRIFDSPFWIIHPVFCNNVTVRNIYI--DSNNYNNDGCDPESCTNVLIENMD 267
Query: 243 ISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHI 302
+ GDD +A+KSG D+ G G + + IR + I +GSETSGGV NV E
Sbjct: 268 FNVGDDGIAIKSGRDQDGWRIGQATENVIIRNCHFAR--WAITIGSETSGGVRNVYIEDC 325
Query: 303 NLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI------KIAGDVGDHPDDKFNP 356
+ + GI+ K+N+ RGG+ N+ + + + G+ G+HP
Sbjct: 326 KIDSCRNGIYFKSNLDRGGYFENLNMRRIEADVCLWGVVNFRTNYHGYRGGNHP------ 379
Query: 357 NALPVVNGITIKDVWGTKVQQSGLI-QGLKNSPFTGICLSNINLQ 400
+ I I+D+ +V L+ GL + I L NI ++
Sbjct: 380 ---TLFRNICIEDINCNRVDSVALMANGLPEAKLYNITLRNIKVK 421
>gi|375109255|ref|ZP_09755504.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella jeotgali KCTC 22429]
gi|374570559|gb|EHR41693.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella jeotgali KCTC 22429]
Length = 481
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 118/422 (27%), Positives = 193/422 (45%), Gaps = 63/422 (14%)
Query: 27 SGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTG 86
+ I P+ + + SITDFG NT A AI +GG + +P G + TG
Sbjct: 55 AAIKPVTFPDRSFSITDFGAAAKAGFDNTAAIAAAIAACAA---AGGGRVLIPGGRFETG 111
Query: 87 SFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVV 146
+ +L S++ L+LA V+ D ++ + + + G E G Y I+ +++
Sbjct: 112 AIHLKSNVNLHLADDTVLSFYTDREHY--LPYVMTRWEGVELMG--YSPLIYAYQQENIA 167
Query: 147 ITGENGTIDGQGAI--WW---NMWRQRT-----------------------LP------- 171
+TG NG ++G GA+ WW W +R +P
Sbjct: 168 LTG-NGILEGNGAVDAWWPWKGHWERRNWDYDASVDQVKTRSPLFEMAERGVPVSERVFN 226
Query: 172 --FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 229
F RP I+ + ++I V +NSPFW I+PV +V++R V ++ PN+DG +
Sbjct: 227 ENFLRPPFIQPYGCKRVLIEGVTIRNSPFWLINPVLSEDVIVRNVNCISYG--PNSDGCN 284
Query: 230 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 289
P+S + V IE+ TGDD +A+KSG + G P + I+ + G+ +GSE
Sbjct: 285 PESCNRVLIENCLFDTGDDCIALKSGRNNDGRRLATPVQNVVIQDCIMRAGHGGVVMGSE 344
Query: 290 TSGGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI----- 342
SGG N+ A + N+ GI +KTN RGG I N+ + D+ + R I I
Sbjct: 345 ISGGARNIFARRCRMSSPNLARGIRIKTNSVRGGLIENVYIRDIEIGEVRDAIVINFFYE 404
Query: 343 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 402
GD G N +P V + I ++ K Q++ ++G + +P +G+ L ++
Sbjct: 405 EGDAG---------NFMPQVKNLHISNLTVQKAQRAFELRGFERAPISGVTLHHVQFNNT 455
Query: 403 AG 404
A
Sbjct: 456 AA 457
>gi|404484304|ref|ZP_11019517.1| hypothetical protein HMPREF1135_02577 [Clostridiales bacterium
OBRC5-5]
gi|404342621|gb|EJZ68992.1| hypothetical protein HMPREF1135_02577 [Clostridiales bacterium
OBRC5-5]
Length = 526
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 178/386 (46%), Gaps = 31/386 (8%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+++ DFG GDG ++ + AI + GT+ Y+P G YL L S++ L++
Sbjct: 83 LNVKDFGAAGDGVKTDSVCIQAAI----NACPKDGTV-YIPKGKYLCTPVFLKSNIDLWI 137
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRER---------PGGRYMSFIHGDGLQDVVITG 149
K A++ +D +P++ + + P + + I G +++V+I G
Sbjct: 138 DKDAILIGEKDRKKYPILPGMTQSSDENDEYNIGSWEGNPLDCFAALITGISVENVLIFG 197
Query: 150 ENGTIDGQGAI--WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCS 207
E G +DG + WW +++ + + RPN + N ++I + + NSP W +HP Y
Sbjct: 198 E-GILDGNAGMLDWWKDAKKKNIAW-RPNTVFLHNCKNIAMQGLCIMNSPSWTVHPYYSD 255
Query: 208 NVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPS 267
N++ TI+ P +SPNTDG+DP+S NV I + IS GDD VA+KSG + + P+
Sbjct: 256 NLLFLNNTIMNPDNSPNTDGLDPESCENVLILGADISVGDDCVAIKSGKYYMALKHYKPA 315
Query: 268 SGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG--GFIRN 325
I IR + +GSE + GV +V E G+ +KT GRG + N
Sbjct: 316 KNIVIRNSIFRKGHGSVTIGSEVAAGVYDVSVEKCIFEGTDRGLRIKTRRGRGEKSVLDN 375
Query: 326 ITVSDVYMENA----RKGIKIAGDVGDHPD-----DKFNPNA-LPVVNGITIKDVWGTKV 375
I ++ M++ + D H D DK N P + I +D+ V
Sbjct: 376 ICFENIIMKDVCMPFTANMFYFCDPDGHSDYVQNQDKMEVNEKTPKIGKIAARDIRCENV 435
Query: 376 QQ-SGLIQGLKNSPFTGICLSNINLQ 400
+ + GL P I L NI L
Sbjct: 436 KNIFACLYGLPEMPVEEIVLENITLN 461
>gi|383641178|ref|ZP_09953584.1| glycoside hydrolase [Sphingomonas elodea ATCC 31461]
Length = 465
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 188/411 (45%), Gaps = 58/411 (14%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+T FG GDG+TLN+ A AI +GG + VP G +LTG+ +L S++ L+L
Sbjct: 46 FDVTRFGARGDGQTLNSTAIARAIAACAA---AGGGRVVVPAGRFLTGAVHLRSNVNLHL 102
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
GA + + D ++PL+ + R Y ++ +++ ITGE GT+DGQG
Sbjct: 103 QAGATLLFSTDPKDYPLV-----FTRWEGIELMNYSPLVYARQQRNIAITGE-GTLDGQG 156
Query: 159 AI--WWNM-----------WR-----------------QRTLP----------FTRPNLI 178
+ WW+ WR +R +P F RP +
Sbjct: 157 SARHWWSWKGPWGGTVDHGWREGMPDQRKARAILFEMAERRVPVEKRVFGEGSFLRPAFV 216
Query: 179 EFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCI 238
+ + +++I V + +PFW IHPV C N+++R V +L PN DG DP+S I
Sbjct: 217 QPYDCENVLIEGVKLRGAPFWQIHPVLCRNLIVRGVDVL--GHGPNNDGCDPESVDGALI 274
Query: 239 EDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVL 298
E TGDD +A+ SG +E G P+ I IR G+ VGS+ SGG +
Sbjct: 275 ERCTFDTGDDCIAINSGRNEDGRRLAMPAQNILIRDCRMKEGHGGVVVGSQISGGARWIF 334
Query: 299 AEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-ARKGIKIAGDVGDHPDDKFN 355
AE ++ ++ I K N RGG + N D+ + +R + + + + +F
Sbjct: 335 AERCVMDSPDLWYAIRFKNNALRGGLLENFFYRDIDVGTVSRAAVTCDFNYEEGANGRF- 393
Query: 356 PNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPT 406
+P + + I+ + + QGL +P TG+ L + + GV P+
Sbjct: 394 ---VPRLRNVVIERLRTKNAARVLDSQGLPGAPVTGVTLRDCSFDGVTQPS 441
>gi|299141314|ref|ZP_07034451.1| exo-poly-alpha-D-galacturonosidase [Prevotella oris C735]
gi|298577274|gb|EFI49143.1| exo-poly-alpha-D-galacturonosidase [Prevotella oris C735]
Length = 858
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 125/416 (30%), Positives = 187/416 (44%), Gaps = 65/416 (15%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYR-IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+ IT FG T + ++AI+R I +L + GG + V G + TG+ LTS + L
Sbjct: 46 VVITKFGA---KTTASAAQNQQAIHRAIAYLAKLGGGKVVVLAGKWQTGALRLTSGIELV 102
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
++K A+++ D +PL+ Y I+ G DVV++GE GTIDG
Sbjct: 103 VSKDALLQFVFDRSLYPLVKT-----SWEGMMCWNYSPCIYSYGADDVVVSGE-GTIDGG 156
Query: 158 GA--IWWNM----------------------------------WRQRTLPF---TRPNLI 178
G+ WW M W +R RP LI
Sbjct: 157 GSNETWWPMCGKQVFGYVKGVTKEAQVSGSRRRLQQFAEDDVPWDERRFGLGQGLRPQLI 216
Query: 179 EFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCI 238
F+ + +S V +SPFW IHP+ C NV + V I + PN DG DP++ NV I
Sbjct: 217 NFVKGNRVRVSGVTLLHSPFWVIHPLLCKNVTVDGVKIWN--EGPNGDGCDPEACENVLI 274
Query: 239 EDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVL 298
++++ TGDD +A+KSG + G + PS I IR GI +GSE SGG +NV
Sbjct: 275 QNTHFHTGDDCIAIKSGRNNDGRMWNKPSRNIIIRNCVMEDGHGGIVIGSEISGGCKNVY 334
Query: 299 AEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNP 356
AE + ++ + +KTN RGG I NI + V + ++ + + ++ P++
Sbjct: 335 AEDCTMDSPHLDRVLRIKTNNCRGGRIENINMRRVKVGQCKEAV-VKINLDYEPEEPCYR 393
Query: 357 NALPVVNGITIKDVWGTKVQQSGLIQG-----------LKNSPFTGICLSNINLQG 401
P V + I+DV K LI G LK+ F GI N+ + G
Sbjct: 394 GFEPEVRDVNIEDVTCRKSAYGVLIVGRDSVENVSDIRLKDCVFNGIGRENVRITG 449
>gi|167765390|ref|ZP_02437503.1| hypothetical protein BACSTE_03778 [Bacteroides stercoris ATCC
43183]
gi|167697018|gb|EDS13597.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 452
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 119/405 (29%), Positives = 195/405 (48%), Gaps = 55/405 (13%)
Query: 29 IVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVY-LTGS 87
IVP + + +TD+G D + A +AI H +GG + +P G Y + G+
Sbjct: 41 IVPPVFADTVYDVTDYGAKSDTTFDSCPAILQAI---SHCNTNGGGTVLIPAGNYFIKGA 97
Query: 88 FNLTSHMTLYLAKGAVIKATQDTWNW-PLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVV 146
L S++ L++A+GA ++ + + ++ P++ + G E Y FI+ +V
Sbjct: 98 ITLKSNINLHIAEGARLEFSTEAADYLPMVL---TKWEGTE--CFNYSPFIYAYQCTNVA 152
Query: 147 ITGENGTIDGQGAIWWNMWR---------------------QRTL---PFTRPNLIEFMN 182
+TG+ GTIDG G++ +N W QR + RP +I+F
Sbjct: 153 VTGK-GTIDGNGSVTFNGWHAIQGPAVDRLRQMGIDSVPVYQRVFGEGHYLRPCMIQFYG 211
Query: 183 SRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSY 242
+++++ ++ +SPFW IHPV+C NV +R V I +++ N DG DP+S +NV IE
Sbjct: 212 CKNVLVEDLKIYDSPFWIIHPVFCDNVTVRNVYI--DSNNYNNDGCDPESCTNVLIEGMD 269
Query: 243 ISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHI 302
+ GDD +A+KSG D+ G G + + IR + I VGSE SGGV N+ E
Sbjct: 270 FNVGDDGIAIKSGRDQDGWRIGQATENVIIRNCHFAR--WAITVGSEMSGGVRNIYIEDC 327
Query: 303 NLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG-IKIAGDV-----GDHPDDKFNP 356
+ + GI+ K+N RGG+ N+ + + + G I + G+HP
Sbjct: 328 KIDSCRNGIYFKSNPDRGGYFENLNMRRIEADVCLWGVINFRTNYHGYRGGNHP------ 381
Query: 357 NALPVVNGITIKDVWGTKVQQSGLI-QGLKNSPFTGICLSNINLQ 400
+ I I+DV +V L+ GL + I L NIN++
Sbjct: 382 ---TLFRNICIEDVTCNRVDSVALMANGLPEAKLHNITLRNINVK 423
>gi|146301983|ref|YP_001196574.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156401|gb|ABQ07255.1| Candidate polygalacturonase; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 448
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 115/409 (28%), Positives = 199/409 (48%), Gaps = 45/409 (11%)
Query: 27 SGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVY-LT 85
S I P + ++++ G GD T N F +A+ + ++ GGT++ VP G+Y +
Sbjct: 30 SRIQPPVFSAYQVNVLKLGAKGDSITNNKAVFDKAMALCK--KKGGGTII-VPKGIYKIN 86
Query: 86 GSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDV 145
G + S++ L + KGA IK + + ++PL+ L S+ Y I+ ++
Sbjct: 87 GPIHFVSNVNLKIEKGAKIKFSDNPQDYPLV--LTSWEGTMLY---NYSPLIYAVDCTNI 141
Query: 146 VITGENGTIDGQGAIWWNMWRQR--------------TLP----------FTRPNLIEFM 181
ITG G IDG+G W ++ + +P F RP +I+F+
Sbjct: 142 AITGV-GIIDGEGGKIWKSFKAKEGAGKNLSREMNHNNVPVSDRKFGEGYFLRPQMIQFL 200
Query: 182 NSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDS 241
N ++I++ NV +NSPFW +H + N+ +R ++ + + N DGIDP+ + +V IE+
Sbjct: 201 NCKNILVENVRIENSPFWCLHLLKSQNITVRGISY--KSLNYNNDGIDPEYAKDVLIENV 258
Query: 242 YISTGDDLVAVKSGWDEYGIA-YGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAE 300
GDD VA+K+G D G A PS I IR G+ +GSE S GV+NV E
Sbjct: 259 TFDNGDDNVAIKAGRDHEGRANTASPSENIVIRNCNFKG-LHGVVIGSEMSAGVQNVFVE 317
Query: 301 HINLYN-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNAL 359
+ + GI++KTN RGG+I+N+ V ++ ++ + I + + +
Sbjct: 318 NCKTAGYLKRGIYLKTNADRGGYIKNVFVQNLQLDEVEDCLYITANYHGEGEGYQSD--- 374
Query: 360 PVVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINLQGVAGPTS 407
++ I ++ + +SG+ IQG + I L+NI+++ S
Sbjct: 375 --ISNIHFSNITCNRASESGIVIQGFSDKKIRSISLNNIDIKEAKNALS 421
>gi|189462203|ref|ZP_03010988.1| hypothetical protein BACCOP_02885 [Bacteroides coprocola DSM 17136]
gi|189431106|gb|EDV00091.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 460
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 101/294 (34%), Positives = 151/294 (51%), Gaps = 33/294 (11%)
Query: 72 GGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNW-PLIAPLPSYGRGRERPG 130
GGT+ +L G +L S + L LA+GA ++ + + ++ P++ + G E G
Sbjct: 75 GGTVKISEGHYFLNGPLHLKSDVNLNLAEGAYLQFSGKSSDFLPVVL---TRWEGTELYG 131
Query: 131 GRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMW---------RQRTL----------- 170
M I+ ++ ITG+ GTID QG + + W R R +
Sbjct: 132 HSPM--IYAYHANNIAITGK-GTIDAQGGLEFAAWSKIEANDRDRLREMGDKLVPVHERI 188
Query: 171 ----PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 226
RP+ I+ ++I + ++SPFW IHPVYC NV++R VTI + PN D
Sbjct: 189 FGEGTVLRPSCIQPYGCSRVLIEGITVKDSPFWTIHPVYCDNVIVRGVTI--DSHFPNND 246
Query: 227 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 286
G DP+S++NV IE+ TGDD +A+KSG D G G PS I IR S +G+ +
Sbjct: 247 GCDPESTTNVLIENCTFRTGDDAIAIKSGRDTDGRYIGRPSRNIVIRNCIFHSECNGLCI 306
Query: 287 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 340
GSE SGG +V +I + V I+ K+N RGG+IRN+ V + +E A+ I
Sbjct: 307 GSEMSGGASDVYMNNIEIGTVKNAIYFKSNRDRGGYIRNVVVDSITVERAKGAI 360
>gi|358066336|ref|ZP_09152863.1| hypothetical protein HMPREF9473_04926 [Clostridium hathewayi
WAL-18680]
gi|356695387|gb|EHI57019.1| hypothetical protein HMPREF9473_04926 [Clostridium hathewayi
WAL-18680]
Length = 539
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 149/295 (50%), Gaps = 20/295 (6%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+++ DFG GDG +T + AI ++G L VP G+Y S L + L +
Sbjct: 102 LNVRDFGAKGDGVQDDTGFIQAAI---MCCPKNGRVL--VPEGIYRVSSLFLKDDLRLEI 156
Query: 99 AKGAVIKATQDTWNWPLIAPL-PSYGRGRE--------RPGGRYMSFIHGDGLQDVVITG 149
KGAV+ A D +P++ L SY E P + + I G +++VV+ G
Sbjct: 157 GKGAVLSAFTDRTKFPVLKGLIDSYDEKEEYNLGSWEGNPLDMFSAIITGINVKNVVLYG 216
Query: 150 ENGTIDGQGAI----WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVY 205
+ G I+G WW + R + F RP +I + +++ + QNSP WNIHP +
Sbjct: 217 Q-GLIEGNAGYEEDNWWYNAKVRRIAF-RPRMIFLNHCEHVVVQGIRVQNSPSWNIHPYF 274
Query: 206 CSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH 265
+++ +T+L P DSPNTDG+DP+S +V I Y S GDD +A+KSG G Y
Sbjct: 275 SNHLRFLDLTVLNPKDSPNTDGLDPESCKDVEIAGVYFSLGDDCIAIKSGKIYMGAKYRV 334
Query: 266 PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 320
PS I IR+ I +GSE +GGV+++ + + G+ +KT GRG
Sbjct: 335 PSEDIVIRQCCMRDGHGSITIGSEMAGGVKHLTVKDCLFLHTDRGLRIKTRRGRG 389
>gi|194015552|ref|ZP_03054168.1| glycoside hydrolase [Bacillus pumilus ATCC 7061]
gi|194012956|gb|EDW22522.1| glycoside hydrolase [Bacillus pumilus ATCC 7061]
Length = 463
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 123/410 (30%), Positives = 191/410 (46%), Gaps = 60/410 (14%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+ ++ +G G L+T A + AI L+ GG +L +P G ++TG+ L SH+ L+
Sbjct: 53 EFNVVHYGADAKGTELSTDAIQSAIDDAHRLK--GGRVL-IPEGTFVTGALELKSHVELH 109
Query: 98 LAKGAVIKATQDTWNW-PLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDG 156
L + A + +Q+ ++ PL+ L Y G E Y I+ +++ ITG GT+DG
Sbjct: 110 LHEKAYVAFSQNRKDYLPLV--LTRY-EGVELYN--YSPLIYAHHAENIAITGA-GTLDG 163
Query: 157 QG--AIWW----------NMWRQRTLPFT-------------------RPNLIEFMNSRS 185
+G WW + R R L F R + I+ +
Sbjct: 164 RGDEHHWWPWKYGTNGQPSQDRDRQLLFDMAEKRIPVEERVFGEGHYLRSSFIQPYQCQQ 223
Query: 186 IIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYIST 245
++I V ++SP W IHPV V++R V I+ PNTDG++P+S NV IED Y
Sbjct: 224 VLIEGVTVKDSPMWQIHPVLSELVIVRGVHII--GHGPNTDGVNPESCRNVLIEDCYFDN 281
Query: 246 GDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEH--IN 303
GDD +A+KSG +E G G PS I IRR G+ +GSE SGGV + AE+ ++
Sbjct: 282 GDDCIAIKSGRNEDGRRIGIPSENIVIRRNEMRDGHGGVTIGSEISGGVRYIYAENNVMD 341
Query: 304 LYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI------AGDVGDHPDDKFNPN 357
N+ + +KTN RGG I +I + +++ + + GD G H
Sbjct: 342 SPNLDRALRIKTNSVRGGTIEHIYFKNNTVKSLKHEVVCIDMMYEEGDAGPH-------- 393
Query: 358 ALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTS 407
PVV I ++ + + + I +SP T + N + V P S
Sbjct: 394 -RPVVRHIQVEGLKSSGGRYGVKIAAYSHSPVTNFNMKNCVIDHVTYPLS 442
>gi|189462646|ref|ZP_03011431.1| hypothetical protein BACCOP_03343 [Bacteroides coprocola DSM 17136]
gi|189430807|gb|EDU99791.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 482
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 115/401 (28%), Positives = 187/401 (46%), Gaps = 55/401 (13%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
+I DFG D T + + I + GG + +P G + TG + S++ L+L
Sbjct: 64 NIKDFGATTD--TPDQPCHEQINLAITTCNQEGGGTVVIPKGTFYTGPITMKSNVNLHLE 121
Query: 100 KGAVIKATQDTWNWPLIAP-LPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
+GA +K + D L P + + G + R + + +G+ ++ ITG+ GTIDGQG
Sbjct: 122 EGATLKFSTDQ---KLYFPGVITRWEGLDCYNARPLIYAYGES--NIAITGK-GTIDGQG 175
Query: 159 A--IWWNM-------W-----------RQRTLPFT-----------------RPNLIEFM 181
+ WW M W R+R + + RP LI F
Sbjct: 176 SNETWWPMCGAAHYGWKEGMHSQKLGSRERLMGYAELKRPIYERAMTPEDALRPQLINFY 235
Query: 182 NSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDS 241
+I+I +V NSPFW IHP+ C ++++R V I PN DG DP+S NV IE+
Sbjct: 236 LCNTILIEDVTLLNSPFWVIHPLLCESLIVRGVKIYNRG--PNGDGCDPESCKNVLIENC 293
Query: 242 YISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEH 301
TGDD +A+KSG +E G + PS I +R + G+ +GSE SGG N+ E+
Sbjct: 294 RFDTGDDCIAIKSGRNEDGRKWNRPSENIIVRNCEMKNGHGGVVIGSEISGGYRNLYVEN 353
Query: 302 INLYNVGVG--IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNAL 359
+ + + I +KTN RGG + N+ V ++ + + + + ++ + N
Sbjct: 354 CVMDSPQLDRVIRIKTNDCRGGIVENVFVRNIKVGQCHEAV-LKINLLYESKENCNRAFP 412
Query: 360 PVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 400
P+V + +K++ Q GL N C+ NI+++
Sbjct: 413 PIVRNVHLKNITCENSQYGIYAVGLPNKD----CVYNISVE 449
>gi|295095844|emb|CBK84934.1| Endopolygalacturonase [Enterobacter cloacae subsp. cloacae NCTC
9394]
Length = 430
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 126/402 (31%), Positives = 185/402 (46%), Gaps = 56/402 (13%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
ISI G + L+T A ++AI Q ++ +P G +LTG+ L S ++L L
Sbjct: 4 ISILACGADPTAQRLSTSAIQQAINSAQQ-----NDVIVIPQGRFLTGALFLKSGVSLRL 58
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
GA + +QD ++PLI + G P G I+ ++V ITG GTIDGQG
Sbjct: 59 DAGAQLVGSQDLADYPLINTRVA-GIDMRWPAG----IINIIDCENVSITG-TGTIDGQG 112
Query: 159 AIWWNM-------------WRQRTLPFT------RPNLIEFMNSRSIIISNVIFQNSPFW 199
IWW + R L + RP I S+SI++ + + S FW
Sbjct: 113 VIWWQRFWGDDERSGMVGDYSARGLRWVVDYDCQRPRNILVFESQSILLRDFTSRESGFW 172
Query: 200 NIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEY 259
N+H Y + + V I A P+TDGID DS V +E +S DD + +KSG
Sbjct: 173 NMHLCYSRRITVEGVQISNSA-GPSTDGIDIDSCEQVRVERCIVSCNDDNICIKSGRGRE 231
Query: 260 GIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 319
+ I IR T + SGI +GSETSGG+E VL E GVG +K+ R
Sbjct: 232 AAQKARTARDIVIRGCT-LNKGSGITLGSETSGGIERVLIEDNAFNGTGVGFRIKSARNR 290
Query: 320 GGFIRNITVSDVYMENARKGIKIA------------GDVGDHPDDKFN-------PNALP 360
GGFIR+ITV ++++ + R + I G++ D P+ L
Sbjct: 291 GGFIRDITVQNLHLTDVRFPVLIQLNWFPQYSYGDRGNLSDKPEHWRKLAEGVEGEAGLT 350
Query: 361 VVNGITIKDVWGTK-----VQQSGLIQGLKNSPFTGICLSNI 397
V+G+TIK++ + ++ I+G P TG+ L I
Sbjct: 351 AVSGLTIKNMSAHRSDNKYFSRAFFIEGYPERPVTGLTLDGI 392
>gi|431798423|ref|YP_007225327.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789188|gb|AGA79317.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 565
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 118/442 (26%), Positives = 191/442 (43%), Gaps = 78/442 (17%)
Query: 34 YRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSH 93
+ + +++IT +G VG+G NT AF +AI + ++GG + VP G++LTG L S+
Sbjct: 50 FPDHEVNITAYGAVGNGIEKNTAAFAKAI---DEVAQAGGGRVIVPRGIWLTGPVTLQSN 106
Query: 94 MTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGT 153
+ L+L +GA++ ++D ++PL+ + G R S I+ +++ ITG+ G
Sbjct: 107 INLHLEEGALVLFSRDFDDYPLVK---TSFEGLNTV--RCTSPINAFEAENIAITGK-GV 160
Query: 154 IDGQGAIWWNMWRQRTLP------------------------------------------ 171
IDG G W + + + P
Sbjct: 161 IDGNGDAWRPVKKGKMTPGQWDKLVKSGGVLSDDEKMWFPTANSKKGYTSSSNFNVPDLI 220
Query: 172 ----------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 221
F RP ++ + +++ FQNSP WNIHP+ NVVIR + + P
Sbjct: 221 SDDELASVKDFLRPVMVSLVKCNKVLLDGPTFQNSPAWNIHPLMSENVVIRNLNVRNPWY 280
Query: 222 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 281
S N DG+D +S N + ++ GDD + KSG ++ G G P+ + ++ T
Sbjct: 281 SQNGDGLDLESCKNALVYNNTFDVGDDAICFKSGKNQDGRDRGMPTENVIVKNNTVYHAH 340
Query: 282 SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-ARKGI 340
G VGSE SGGV NV + VG+ K+ GRGG + NI +SD+ M N I
Sbjct: 341 GGFVVGSEMSGGVRNVHVSNCTFIGTDVGLRFKSTRGRGGVVENIHISDIDMINIPTDAI 400
Query: 341 K----------IAGDVGDHPDDKFNPNALPVVN------GITIKDVWGTKVQQSGLIQGL 384
+ + + D D+ + +PV I +K++ T + GL
Sbjct: 401 RFNMFYGGNSPVLEEDQDAEDEARDETIVPVTEETPAFKDIYMKNITATGSGTAAFFMGL 460
Query: 385 KNSPFTGICLSNINLQGVAGPT 406
+ L N L+ G T
Sbjct: 461 PEKSLENVRLENALLEAKNGIT 482
>gi|300728229|ref|ZP_07061597.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
gi|299774464|gb|EFI71088.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
Length = 856
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 123/403 (30%), Positives = 185/403 (45%), Gaps = 62/403 (15%)
Query: 48 GDGKTLNTKAFREAIYR-IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKA 106
G + + A ++AI R I + GG + +P G Y TG+ + SH+ L + +GA +
Sbjct: 51 GASEKASAAANQKAINRVIAMASKKGGGNVIIPKGTYSTGAITMLSHVNLVVEEGATLHF 110
Query: 107 TQDTWNWPLIAPLPSYGRGRERPGG----RYMSFIHGDGLQDVVITGENGTIDGQGA--I 160
+ +PL+ R G Y I+ D+ ITG+ GTIDG G+
Sbjct: 111 AFEPKLYPLV---------RTSWEGLACWNYSPCIYAYKATDIAITGK-GTIDGGGSNDT 160
Query: 161 WWNM---------------------------WRQRTLPFT----------RPNLIEFMNS 183
WW M + +PF RP LI F+ S
Sbjct: 161 WWPMNGNPKFGYKPGITKESQKLGSRAKLMKMAENDVPFDERKFGMGQGLRPQLINFVRS 220
Query: 184 RSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYI 243
+I+I +V SPFW IHP+ C N+ + V I + PN DG DP++ NV I+++
Sbjct: 221 ENILIKDVTLLRSPFWVIHPLLCKNITVDGVQIWN--EGPNGDGCDPEACENVIIQNTLF 278
Query: 244 STGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAE--H 301
TGDD +A+KSG + G +G PS I IR G+ +GSE SGG ENV AE +
Sbjct: 279 HTGDDCIAIKSGRNNDGRFWGKPSKNIIIRNCKMEDGHGGVVIGSEISGGCENVYAENCY 338
Query: 302 INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI-KIAGDVGDHPDDKFNPNALP 360
++ N+ + +KTN RGG I+NI + +V + ++ + KI D ++ D P
Sbjct: 339 MDSPNLERVLRIKTNNCRGGLIQNINMRNVKVGQCKEAVLKINLDYENNED--CYRGFEP 396
Query: 361 VVNGITIKDVWGTKVQQSGLIQGLKN-SPFTGICLSNINLQGV 402
V + +++V K + L+ GL N I L N GV
Sbjct: 397 TVRNVNMENVTCEKSEYGVLMIGLDNVDNIYDINLKNCTFNGV 439
>gi|427386399|ref|ZP_18882596.1| hypothetical protein HMPREF9447_03629 [Bacteroides oleiciplenus YIT
12058]
gi|425726439|gb|EKU89304.1| hypothetical protein HMPREF9447_03629 [Bacteroides oleiciplenus YIT
12058]
Length = 467
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 119/389 (30%), Positives = 185/389 (47%), Gaps = 55/389 (14%)
Query: 41 ITDFGGVGDGKTLNT-KAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
ITDFG D +A +AI + GGT++ VP G + TG L S++ ++
Sbjct: 50 ITDFGAKPDTPDAPCHEAINQAI--VTCCLNGGGTVI-VPKGTFYTGPITLKSNVNFHVE 106
Query: 100 KGAVIK-ATQDTWNWP-LIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
+GA++K +T + +P +I RP I+ G ++ ITG+ GTIDGQ
Sbjct: 107 EGAILKFSTDQSLYFPGVITRWEGLDCYNARP------LIYAYGETNIAITGK-GTIDGQ 159
Query: 158 GA--IWWNM-------W-----------RQRTLPF-----------------TRPNLIEF 180
G+ WW M W R+R L + RP LI
Sbjct: 160 GSNDTWWPMCGAPRYGWKEGMVAQRNGGRERLLMYGETSTPVYKRVMTPEDGLRPQLINL 219
Query: 181 MNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIED 240
+ +++I +V NSPFW IHP++C ++++R V + PN DG DP+S NV IE+
Sbjct: 220 YSCNTVLIEDVTLLNSPFWVIHPLFCESLIVRGVYVYNRG--PNGDGCDPESCKNVLIEN 277
Query: 241 SYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAE 300
TGDD +A+KSG ++ G +G PS I +R G+ +GSE SGG N+ E
Sbjct: 278 CTFDTGDDCIAIKSGRNQDGRKWGIPSENIIVRGCYMKKGHGGVVIGSEISGGYRNLYVE 337
Query: 301 HINLYNVGVG--IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNA 358
+ + + + I +KT+ RGG I N+ V +V + R+ + + ++ + N
Sbjct: 338 NCKMDSPDLDRVIRIKTSTCRGGLIENVFVRNVTVGQCREAV-LRINLQYENRENCNRGF 396
Query: 359 LPVVNGITIKDVWGTKVQQSGLIQGLKNS 387
P V + +K+V K + LI GL N
Sbjct: 397 TPTVRNVHLKNVTCEKSKLGVLIIGLDND 425
>gi|372276037|ref|ZP_09512073.1| polygalacturonase [Pantoea sp. SL1_M5]
Length = 430
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 107/321 (33%), Positives = 161/321 (50%), Gaps = 40/321 (12%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+I+I DF V D +L+T+A + AI G + +P G +LTG+ L S MTL
Sbjct: 3 RINIIDFDAVPDATSLSTQAIQRAIDSAAE-----GDTVLIPAGRFLTGALFLKSKMTLE 57
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYM----SFIHGDGLQDVVITGENGT 153
LAK AV+ +Q ++P IA R G M + ++ + ++V + G +GT
Sbjct: 58 LAKDAVLLGSQQLEDYPEIAT---------RVAGIDMVWPTAMLNINQCRNVTVCG-SGT 107
Query: 154 IDGQGAIWWNM-------------WRQRTLPFT------RPNLIEFMNSRSIIISNVIFQ 194
+DGQGA+WW+ + +R L + RP + S + + + +
Sbjct: 108 LDGQGAVWWHKFWGDDENSGMLADYTRRGLRWVVDYDCRRPRNLVVYQSECVTLQDFTSK 167
Query: 195 NSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKS 254
+S FWN+H Y V ++ + ++ A +TDGID DSS V +E +S DD + VKS
Sbjct: 168 DSGFWNLHVCYSKQVNLQRLNVM-NATGTSTDGIDIDSSQLVRVEGCTVSCNDDNICVKS 226
Query: 255 GWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVK 314
G + I IR T SGI +GSETSGG+ENV+ EH GVG +K
Sbjct: 227 GRGAEAQQLARTARDIIIRDCTLLKG-SGITLGSETSGGIENVIIEHNRFSGTGVGFRIK 285
Query: 315 TNIGRGGFIRNITVSDVYMEN 335
+ RGG+I+NI V + ME+
Sbjct: 286 SARNRGGWIKNIIVRHLIMED 306
>gi|294815999|ref|ZP_06774642.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
gi|326444342|ref|ZP_08219076.1| glycoside hydrolase family 28 [Streptomyces clavuligerus ATCC
27064]
gi|294328598|gb|EFG10241.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
Length = 479
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 124/426 (29%), Positives = 199/426 (46%), Gaps = 71/426 (16%)
Query: 29 IVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSF 88
I P R+ + IT +G VGDG T NT A R AI R+GG + VP G ++TG+
Sbjct: 58 IRPPRFPDRWFDITQYGAVGDGTTKNTAAIRAAITACH---RAGGGHVLVPAGRFVTGAI 114
Query: 89 NLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVIT 148
+L + L++++G ++ + D ++ L A L + G E Y F++ + V +T
Sbjct: 115 HLRGGVDLHVSEGGILAFSPDPADY-LPAVLTRW-EGTE--CWNYSPFVYAHNQRGVAVT 170
Query: 149 GENGTIDGQG--AIWWNMWRQRTLP--------------------------FTRPNLIEF 180
GE G +DGQ W + +R TL + RP +++F
Sbjct: 171 GE-GILDGQARRGPWESWYRTGTLQGPDQRLLRKMGSEGVPVKDRLFGAGHYLRPKMVQF 229
Query: 181 MNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIED 240
R ++IS++ + P W +HPV C+NV +R +T+ + NTDG+DP++S V I
Sbjct: 230 NRCRDVLISDLTIVDPPMWTVHPVLCTNVTVRNITVESLLH--NTDGVDPEASRLVHITG 287
Query: 241 SYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAE 300
+T DD VAVK+G DE G G PS I ++ S + GI VGSE SGGV V AE
Sbjct: 288 CRFNTNDDCVAVKAGRDEDGHRVGVPSEDIVVQDCDFSGRWGGITVGSEMSGGVRRVFAE 347
Query: 301 HINL--------YNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI------AGDV 346
+ Y V +++K + RGGF+ + V + + + G+
Sbjct: 348 DCRINPPDFPGHYPVKYPVYLKASKKRGGFVDGVYVRRFSGQAVEREVLFVNMDYNGGEG 407
Query: 347 GDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL-----IQGLKNSPFTGICLSNINLQG 401
G HP ++++D+ + + G + GL+ G+ L++ + G
Sbjct: 408 GTHP--------------VSVRDIHLSHCRIDGARAVLRLVGLETDRLRGVHLAHCDFTG 453
Query: 402 VAGPTS 407
V GP +
Sbjct: 454 VRGPDA 459
>gi|424911961|ref|ZP_18335338.1| endopolygalacturonase [Rhizobium leguminosarum bv. viciae USDA
2370]
gi|392847992|gb|EJB00515.1| endopolygalacturonase [Rhizobium leguminosarum bv. viciae USDA
2370]
Length = 517
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 171/370 (46%), Gaps = 25/370 (6%)
Query: 49 DGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQ 108
+G N +A A+ + H GGTL + G++ + L S+MT +LA+GAV++A
Sbjct: 101 EGARANAEALETAVAAVPH----GGTL-RLAAGLWTSFPVRLKSNMTFHLAEGAVLRAPS 155
Query: 109 DTWNWPLIAPLPSYGRG----RERPGGRYMSFIHGDGLQDVVITGENGTIDGQG--AIWW 162
WP++ G P + + + G +++I G G +DG G WW
Sbjct: 156 SRKAWPILPARDDAGHMLGSWEGLPDACFAAPVQAIGTDNLIIEG-RGVLDGSGDRGDWW 214
Query: 163 NMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS 222
+ ++ RP + ++ R I + +N+ W IHP C +++ +TI AP DS
Sbjct: 215 SWPKETRDGARRPRGLHLVSCRKIQLLGFTIKNAASWTIHPQGCEDLIAAGLTINAPHDS 274
Query: 223 PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH--PSSGITIRRVTGSSP 280
PNTDG +P+S NV I S GDD +AVK+G H + GI +R
Sbjct: 275 PNTDGFNPESCRNVTISGVRFSVGDDCIAVKAGKRGPDGEDDHLAETRGIRVRHCLMERG 334
Query: 281 FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 340
G+ +GSE SGGV +V E ++ G+ +KT GRGG + NI + V ++ + +
Sbjct: 335 HGGLVIGSEMSGGVHDVSVEDCDMVGTDRGLRLKTRRGRGGIVSNIAMRRVLLDGVQTAL 394
Query: 341 KIAGDV---GDHPDDKFNP-------NALPVVNGITIKDVWGTKV-QQSGLIQGLKNSPF 389
D D++ P ++GI ++DV + +G+ GL +P
Sbjct: 395 SANAHYHCDADGHDERVQSRQPAPIDKGTPFIDGIIVEDVEIRNLAHAAGVFLGLPEAPI 454
Query: 390 TGICLSNINL 399
+ + N+ +
Sbjct: 455 RNVAIRNLTI 464
>gi|261822466|ref|YP_003260572.1| glycoside hydrolase family protein [Pectobacterium wasabiae WPP163]
gi|261606479|gb|ACX88965.1| glycoside hydrolase family 28 [Pectobacterium wasabiae WPP163]
gi|385872775|gb|AFI91295.1| Glycoside hydrolase family 28 [Pectobacterium sp. SCC3193]
Length = 460
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 126/441 (28%), Positives = 201/441 (45%), Gaps = 52/441 (11%)
Query: 2 FRFLVTLSILLSYFNCFSLA-SVVTCSGIVPMRYRNDKISITDFGGVGDGK--TLNTKAF 58
R + LS++ S C +L T +++ + +T +G G LNT+AF
Sbjct: 1 MRSGLALSLMAS---CITLGIQAGTAQAASSVKFPDKTCDVTQYGAEGHRLQIALNTEAF 57
Query: 59 REAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAP 118
++AI +GG ++VP G YL L S++ L LAK A I A+ + +
Sbjct: 58 QKAI---DDCAAAGGGTVHVPRGNYLVDPLFLKSNIRLDLAKDATIVASTEVAAYRATEK 114
Query: 119 LPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPF------ 172
+ E G ++ FI Q+V ITGE GTIDGQGA+WW WR+
Sbjct: 115 T----KYAEAENG-WLPFISIADAQNVAITGE-GTIDGQGAVWWERWRENIRATGKKGGT 168
Query: 173 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDS 232
RP LI +S ++++ +V +SP ++I Y +V + IL+P +PNTD IDP
Sbjct: 169 DRPRLIYIKSSSNVLVDSVTLTHSPSFHIVMRYSHDVDVNGTRILSPWHAPNTDAIDPID 228
Query: 233 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSG 292
S N+ I ++YI DD +A+K+ + G + + GI++GSETSG
Sbjct: 229 SQNIRITNNYIDCNDDHIAIKAEKPDSRFPNGVVDNIYIANNILKQG--RGISIGSETSG 286
Query: 293 GVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG-------- 344
GV NVL E+ GI +KT G+GG ++NIT + M + + A
Sbjct: 287 GVNNVLVENNQFEGSMYGIRIKTLRGKGGEVKNITYRNTKMVDVEIPLVFAAYYKAAPIV 346
Query: 345 -------------DVGDH-------PDDKFNPNALPVVNGITIKDVWGT-KVQQSGLIQG 383
+G+ P+ F+ P + +TI+++ T K + + I G
Sbjct: 347 QAEVDKMLAEGGFTMGEQIYPPDTDPEQPFDQYKTPHFSNVTIENLESTGKTKAAAYIIG 406
Query: 384 LKNSPFTGICLSNINLQGVAG 404
+ +P +G N+ + G
Sbjct: 407 VPEAPLSGFHFDNVRIDADKG 427
>gi|325105247|ref|YP_004274901.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974095|gb|ADY53079.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 456
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 111/332 (33%), Positives = 162/332 (48%), Gaps = 43/332 (12%)
Query: 29 IVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYL-TGS 87
I+P +K+ ITDFG VGD + + AF + I Q + G + VPPGVYL G
Sbjct: 42 IIPPTISKNKLIITDFGAVGDSLSDSKPAFDKVI---QICKEQNGARIIVPPGVYLLRGP 98
Query: 88 FNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPG-GRYMSFIHGDGLQDVV 146
++ +M++ + KGA + + + ++ LP+ E Y FI+ +++V
Sbjct: 99 IHMVDNMSIDIQKGAKLIFSNEAKDY-----LPTVLTSWEGTFLYNYSPFIYAYQVKNVA 153
Query: 147 ITGENGTIDGQGAIWWNMWR--------------QRTLP----------FTRPNLIEFMN 182
I GE GTIDG +N+W +P F RP I+F
Sbjct: 154 IIGE-GTIDGNAKDSFNLWHGKQKQSQELSRKMNHENVPIEKRQFGEGHFLRPQFIQFFE 212
Query: 183 SRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSY 242
++I+I V NSPFW +H + N+ R V A + N DG DP+ S NV IED
Sbjct: 213 CKNILIEGVTITNSPFWCVHFLKSENITARKVKF--DAFNKNNDGFDPEYSKNVLIEDID 270
Query: 243 ISTGDDLVAVKSGWDEYGIAYGHPSSGITIR--RVTGSSPFSGIAVGSETSGGVENVLAE 300
+ DD +A+K+G D G G S I IR R G G+ +GSE S GV+NV E
Sbjct: 271 FNNADDNIAIKAGRDYEGRRIGLTSENIIIRNCRFKG---LHGVVIGSEMSAGVQNVFVE 327
Query: 301 HINLYN-VGVGIHVKTNIGRGGFIRNITVSDV 331
+ GI++K+N RGGFIR+I +++V
Sbjct: 328 NCTYGGYCKRGIYLKSNPDRGGFIRDIYINNV 359
>gi|266623900|ref|ZP_06116835.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
gi|288864287|gb|EFC96585.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
Length = 537
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 102/310 (32%), Positives = 155/310 (50%), Gaps = 21/310 (6%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+++ FG GDG +T A + AI R +Y+P G YL S L S TL +
Sbjct: 82 LNVRRFGAKGDGIHDDTLAIQTAIASCPKDGR-----VYIPEGKYLVTSLFLKSDFTLDI 136
Query: 99 AKGAVIKATQDTWNWPLI-APLPSYGRGRE--------RPGGRYMSFIHGDGLQDVVITG 149
K AV+ + + ++ + SY E P + S I G + +VVITG
Sbjct: 137 GKNAVLLGHAEREKFGVLPGMIQSYDETGEYNLGSWEGNPLDIFTSMITGIHVSNVVITG 196
Query: 150 ENGTIDGQGAI--WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCS 207
E GT+DG WW R + + F RP ++ + +++ V QNSP WN+HP +
Sbjct: 197 E-GTLDGCATFDDWWEDDRAKIIAF-RPRMVFLNHCDHVVLHGVTIQNSPSWNLHPYFSD 254
Query: 208 NVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPS 267
++ +TIL P DSPNTDG+DP+S + + I Y S GDD +A+KSG G Y PS
Sbjct: 255 DLRFLDLTILNPWDSPNTDGMDPESVNGLEIAGIYFSLGDDCIALKSGKYYMGHKYKVPS 314
Query: 268 SGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 327
I +R+ ++ + +GSE + GV++V + + G+ +KT GRG ++
Sbjct: 315 QNIEVRQCCMNNGHGAVTIGSEMAAGVKHVHVKDCLFLHTDRGLRIKTRRGRG---KDAV 371
Query: 328 VSDVYMENAR 337
V D+ EN R
Sbjct: 372 VEDICFENIR 381
>gi|298383858|ref|ZP_06993419.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298263462|gb|EFI06325.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 538
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/340 (30%), Positives = 154/340 (45%), Gaps = 62/340 (18%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+++I+ FG GDG TLNTKA +AI + R GG ++ +P G +LTG L S++ LY
Sbjct: 58 EVNISKFGAKGDGMTLNTKAINDAIKEVNQ--RGGGKVI-IPEGTWLTGPIELLSNVNLY 114
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
+ A+I T D +P+I P+ G E R S I +++ ITG G DG
Sbjct: 115 TERNALILFTGDFEAYPII---PTSFEGLETR--RCQSPISARNAENIAITG-YGIFDGN 168
Query: 158 GAIW------------WN--------------MW-------------RQRTLP------- 171
G W WN +W + +P
Sbjct: 169 GDCWRPVKKEKLTASQWNKLVKSGGVLDEQERIWYPTAGSLKGAMACKDFNVPEGINTDE 228
Query: 172 -------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 224
+ RP L+ F+ S+ I++ V F+NSP W +HP+ C + + + ++ P S N
Sbjct: 229 EWNEIRAWLRPVLLSFVKSKKILLEGVTFKNSPSWCLHPLSCEDFTVNNIQVINPWYSQN 288
Query: 225 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 284
D +D +S N I +S GDD + +KSG DE G G P + ++ T G
Sbjct: 289 GDALDLESCKNALILNSVFDAGDDAICIKSGKDENGRRRGEPCQNVIVKNNTVLHGHGGF 348
Query: 285 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 324
VGSE SGGV+N+ E VG+ K+ GRGG +
Sbjct: 349 VVGSEMSGGVKNIYVEDCTFLGTDVGLRFKSTRGRGGVVE 388
>gi|288924892|ref|ZP_06418828.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
gi|288338082|gb|EFC76432.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
Length = 470
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 163/341 (47%), Gaps = 52/341 (15%)
Query: 36 NDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMT 95
++++S+ DFGG GDG T+NT+AF +A + L + GG L VP GVYLTG + ++
Sbjct: 46 DNRVSLPDFGGKGDGVTMNTEAFGKA---MSELSKKGGGHLDVPAGVYLTGMISFKDNID 102
Query: 96 LYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTID 155
L+L K A+I + D ++ I + PG I+ +++ ITGE G ID
Sbjct: 103 LHLDKNAIIVLSPDKNDFIKIE--NGMKDDKATPG------INASKRKNISITGE-GIID 153
Query: 156 GQGAIW------------WNMWRQ---------------------------RTLPFTRPN 176
G G W WN + T RP+
Sbjct: 154 GNGEWWRPVKRGKVSDTEWNRLKAMGGTVTPKGDLWYPFNLTHFSNVADTYETQERYRPH 213
Query: 177 LIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNV 236
L+ F + ++++ V NSP ++I P C+NVVI +T+ P ++ N D ID S V
Sbjct: 214 LVRFTDCENVLVKGVTLLNSPKFHIIPTRCTNVVIDGITVKCPWNAQNGDAIDISSCRQV 273
Query: 237 CIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVEN 296
I ++ I GDD + +K+G G+ YG P + + I T + G +GSE SGG++N
Sbjct: 274 LIVNNVIDAGDDGICMKAGAGAKGVEYG-PVANVLIENNTVYNAHGGFVIGSEFSGGMKN 332
Query: 297 VLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 337
++ G+ K+ + RGG NI +SD+YM + +
Sbjct: 333 IVVRRNKFCGTDTGLRFKSAVKRGGKTENIFISDIYMTDIK 373
>gi|402308351|ref|ZP_10827360.1| pectate lyase family protein [Prevotella sp. MSX73]
gi|400375795|gb|EJP28690.1| pectate lyase family protein [Prevotella sp. MSX73]
Length = 470
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 163/341 (47%), Gaps = 52/341 (15%)
Query: 36 NDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMT 95
++++S+ DFGG GDG T+NT+AF +A + L + GG L VP GVYLTG + ++
Sbjct: 46 DNRVSLPDFGGKGDGVTMNTEAFGKA---MSELSKKGGGHLDVPAGVYLTGMISFKDNID 102
Query: 96 LYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTID 155
L+L K A+I + D ++ I + PG I+ +++ ITGE G ID
Sbjct: 103 LHLDKNAIIVLSPDKNDFIKIE--NGMKDDKATPG------INASKRKNISITGE-GIID 153
Query: 156 GQGAIW------------WNMWRQ---------------------------RTLPFTRPN 176
G G W WN + T RP+
Sbjct: 154 GNGEWWRPVKRGKVSDTEWNRLKAMGGTVTPKGDLWYPFNLTHFSNVADTYETQERYRPH 213
Query: 177 LIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNV 236
L+ F + ++++ V NSP ++I P C+NVVI +T+ P ++ N D ID S V
Sbjct: 214 LVRFTDCENVLVKGVTLLNSPKFHIIPTRCTNVVIDGITVKCPWNAQNGDAIDISSCRQV 273
Query: 237 CIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVEN 296
I ++ I GDD + +K+G G+ YG P + + I T + G +GSE SGG++N
Sbjct: 274 LIVNNVIDAGDDGICMKAGAGAKGVEYG-PVANVLIENNTVYNAHGGFVIGSEFSGGMKN 332
Query: 297 VLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 337
++ G+ K+ + RGG NI +SD+YM + +
Sbjct: 333 IVVRRNKFCGTDTGLRFKSAVKRGGKTENIFISDIYMTDIK 373
>gi|315607918|ref|ZP_07882911.1| galacturan 1,4-alpha-galacturonidase [Prevotella buccae ATCC 33574]
gi|315250387|gb|EFU30383.1| galacturan 1,4-alpha-galacturonidase [Prevotella buccae ATCC 33574]
Length = 470
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 163/341 (47%), Gaps = 52/341 (15%)
Query: 36 NDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMT 95
++++S+ DFGG GDG T+NT+AF +A + L + GG L VP GVYLTG + ++
Sbjct: 46 DNRVSLPDFGGKGDGVTMNTEAFGKA---MSELSKKGGGHLDVPAGVYLTGMISFKDNID 102
Query: 96 LYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTID 155
L+L K A+I + D ++ I + PG I+ +++ ITGE G ID
Sbjct: 103 LHLDKNAIIVLSPDKNDFIKIE--NGMKDDKATPG------INASKRKNISITGE-GIID 153
Query: 156 GQGAIW------------WNMWRQ---------------------------RTLPFTRPN 176
G G W WN + T RP+
Sbjct: 154 GNGEWWRPVKRGKVSDTEWNRLKAMGGTVTPKGDLWYPFNLTHFSNVADTYETQERYRPH 213
Query: 177 LIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNV 236
L+ F + ++++ V NSP ++I P C+NVVI +T+ P ++ N D ID S V
Sbjct: 214 LVRFTDCENVLVKGVTLLNSPKFHIIPTRCTNVVIDGITVKCPWNAQNGDAIDISSCRQV 273
Query: 237 CIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVEN 296
I ++ I GDD + +K+G G+ YG P + + I T + G +GSE SGG++N
Sbjct: 274 LIINNVIDAGDDGICMKAGAGAKGVEYG-PVANVLIENNTVYNAHGGFVIGSEFSGGMKN 332
Query: 297 VLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 337
++ G+ K+ + RGG NI +SD+YM + +
Sbjct: 333 IVVRRNKFCGTDTGLRFKSAVKRGGKTENIFISDIYMTDIK 373
>gi|442804291|ref|YP_007372440.1| endopygalactorunase [Clostridium stercorarium subsp. stercorarium
DSM 8532]
gi|442740141|gb|AGC67830.1| endopygalactorunase [Clostridium stercorarium subsp. stercorarium
DSM 8532]
Length = 455
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/312 (35%), Positives = 155/312 (49%), Gaps = 34/312 (10%)
Query: 48 GDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKAT 107
GDG+T + A + AI + SGG +Y PG+YLTGS L S +TL + +G ++
Sbjct: 14 GDGRTDCSNAIQRAIDTVSA---SGGGKVYFRPGIYLTGSIFLKSGVTLEIGEGVELRGI 70
Query: 108 QDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNM-WR 166
D +P I + G E P G I+ G +V ITG+ GTIDGQG WWN W
Sbjct: 71 IDETAYPDIWTRVA-GIEMEWPAG----LINVIGQANVTITGK-GTIDGQGFYWWNKYWG 124
Query: 167 QRTL------------------PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 208
+ L RP I NS + + ++ + SPFWN+H Y ++
Sbjct: 125 EDRLGGMRKEYTGKGLRWAVDYDCKRPRNILIYNSSQVTLRDLTLRRSPFWNVHICYSTD 184
Query: 209 VVIRYVTILAPADS--PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHP 266
V YV+ L D+ P+TDGID DSS NV IE+ I DD + +K+G D G+ P
Sbjct: 185 V---YVSGLVIKDNEGPSTDGIDVDSSRNVLIENCNIECNDDNICIKAGRDADGLRVNRP 241
Query: 267 SSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNI 326
S I +R + S +G+ +GSETSG + NV I G +K+ + RGG I NI
Sbjct: 242 SENIVVRNCSIGSG-AGVTIGSETSGSIRNVEIYQIKANGTDGGFRIKSALTRGGVIENI 300
Query: 327 TVSDVYMENARK 338
V D M N +
Sbjct: 301 RVHDFEMVNVLR 312
>gi|29349595|ref|NP_813098.1| exo-poly-alpha-D-galacturonosidase [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341505|gb|AAO79292.1| exo-poly-alpha-D-galacturonosidase precursor [Bacteroides
thetaiotaomicron VPI-5482]
Length = 538
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 154/340 (45%), Gaps = 62/340 (18%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+++I+ FG GDG TLNTKA +AI + + + GG + +P G +LTG L S++ LY
Sbjct: 58 EVNISKFGAKGDGMTLNTKAINDAI---KEVNQRGGGKVIIPEGTWLTGPIELLSNVNLY 114
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
+ A+I T D +P+I P+ G E R S I +++ ITG G DG
Sbjct: 115 TERNALILFTGDFEAYPII---PTSFEGLETR--RCQSPISARNAENIAITGY-GIFDGN 168
Query: 158 GAIW------------WN--------------MW-------------RQRTLP------- 171
G W WN +W + +P
Sbjct: 169 GDCWRPVKKEKLTASQWNKLVKSGGVLDEQERIWYPTAGSLKGAMACKDFNVPEGINTDE 228
Query: 172 -------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 224
+ RP L+ F+ S+ I++ V F+NSP W +HP+ C + + + ++ P S N
Sbjct: 229 EWNEIRAWLRPVLLNFVKSKRILLEGVTFKNSPSWCLHPLSCEDFTVNNIQVINPWYSQN 288
Query: 225 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 284
D +D +S N I +S GDD + +KSG DE G G P + ++ T G
Sbjct: 289 GDALDLESCKNALILNSVFDAGDDAICIKSGKDENGRRRGEPCQNVIVKNNTVLHGHGGF 348
Query: 285 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 324
VGSE SGGV+N+ E VG+ K+ GRGG +
Sbjct: 349 VVGSEMSGGVKNIYVEDCTFLGTDVGLRFKSTRGRGGVVE 388
>gi|374376177|ref|ZP_09633835.1| Polygalacturonase [Niabella soli DSM 19437]
gi|373233017|gb|EHP52812.1| Polygalacturonase [Niabella soli DSM 19437]
Length = 437
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 123/400 (30%), Positives = 179/400 (44%), Gaps = 74/400 (18%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
K SI DFG + + T NT ++AI ++GG + +PPG+YL G S +
Sbjct: 38 KFSIKDFGAIANNSTDNTGVIQQAI---DAADKAGGGTVIIPPGIYLCGPLQFKSSLNFR 94
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRY--MSFIHGDGLQDVVITGENGTID 155
+ GAV++ + P+ Y PGG FI G L DV ITG +GTID
Sbjct: 95 IDSGAVLR----------LLPMDRY------PGGTKSGTDFISGSKLHDVAITG-SGTID 137
Query: 156 GQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI--HPVYCSNVVIRY 213
GQGA WW ++ + + RP +I N ++I V N+P ++I +NV +
Sbjct: 138 GQGAPWWPAYKDKGV--KRPRMIALQNCERLLIRGVTLMNAPMFHIAISGKATNNVTVDK 195
Query: 214 VTILAPA-DSP-----NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI-----A 262
VT+ APA D P NTD D S + + I+D ISTGDD G I
Sbjct: 196 VTVRAPASDDPLNPSHNTDACDV-SGNKILIKDCDISTGDDNFTCGGGTSNVHIQNCKYG 254
Query: 263 YGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGF 322
YGH G+++GS T GGV N L E + N GI +K++ RGG
Sbjct: 255 YGH-----------------GLSIGSYTKGGVSNFLIEDCSFTNTECGIRIKSDRDRGGV 297
Query: 323 IRNITVSDVYMENARKGIKIAGDVGDHPDD-----KFNP------------NALPVVNGI 365
++N+T ++ MEN I I G + K P + PV I
Sbjct: 298 VQNLTYRNIKMENVGMPILIYGAYMAKEKEFRNLQKITPEIAAGYAREPLTDLTPVYKDI 357
Query: 366 TIKDVWGTKV--QQSGLIQGLKNSPFTGICLSNINLQGVA 403
T +++ T +++GLI GL +P + I + + A
Sbjct: 358 TFENITATTQNGKRAGLIWGLPEAPASNIVFKKVTITASA 397
>gi|383120529|ref|ZP_09941257.1| hypothetical protein BSIG_2461 [Bacteroides sp. 1_1_6]
gi|382985024|gb|EES68500.2| hypothetical protein BSIG_2461 [Bacteroides sp. 1_1_6]
Length = 535
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/340 (30%), Positives = 154/340 (45%), Gaps = 62/340 (18%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+++I+ FG GDG TLNTKA +AI + R GG ++ +P G +LTG L S++ LY
Sbjct: 55 EVNISKFGAKGDGMTLNTKAINDAIKEVNQ--RGGGKVI-IPEGTWLTGPIELLSNVNLY 111
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
+ A+I T D +P+I P+ G E R S I +++ ITG G DG
Sbjct: 112 TERNALILFTGDFEAYPII---PTSFEGLETR--RCQSPISARNAENIAITG-YGIFDGN 165
Query: 158 GAIW------------WN--------------MW-------------RQRTLP------- 171
G W WN +W + +P
Sbjct: 166 GDCWRPVKKEKLTASQWNKLVKSGGVLDEQERIWYPTAGSLKGAMACKDFNVPEGINTDE 225
Query: 172 -------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 224
+ RP L+ F+ S+ I++ V F+NSP W +HP+ C + + + ++ P S N
Sbjct: 226 EWNEIRAWLRPVLLNFVKSKRILLEGVTFKNSPSWCLHPLSCEDFTVNNIQVINPWYSQN 285
Query: 225 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 284
D +D +S N I +S GDD + +KSG DE G G P + ++ T G
Sbjct: 286 GDALDLESCKNALILNSVFDAGDDAICIKSGKDENGRRRGEPCQNVIVKNNTVLHGHGGF 345
Query: 285 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 324
VGSE SGGV+N+ E VG+ K+ GRGG +
Sbjct: 346 VVGSEMSGGVKNIYVEDCTFLGTDVGLRFKSTRGRGGVVE 385
>gi|150004535|ref|YP_001299279.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|319643966|ref|ZP_07998541.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345518227|ref|ZP_08797681.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|423312455|ref|ZP_17290392.1| hypothetical protein HMPREF1058_01004 [Bacteroides vulgatus
CL09T03C04]
gi|149932959|gb|ABR39657.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
gi|254835520|gb|EET15829.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|317384490|gb|EFV65457.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|392688143|gb|EIY81432.1| hypothetical protein HMPREF1058_01004 [Bacteroides vulgatus
CL09T03C04]
Length = 539
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 153/349 (43%), Gaps = 59/349 (16%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
++I DFG DG TLNTKA +AI Q + GG + +P G++LTG L S++ LY
Sbjct: 61 VNIIDFGAKPDGITLNTKAINDAI---QQVNAKGGGKVIIPEGLWLTGPIELLSNVNLYT 117
Query: 99 AKGAVIKATQDTWNWPLI-----------APLPSYGRGRERPGGRYMSFIHGDG------ 141
K A++ + D +P+I P R E G+G
Sbjct: 118 EKNALVLFSADHSLYPIINTSFEGLETRRCQSPISARNAENIAITGHGVFDGNGDTWRPT 177
Query: 142 LQDVVITGE-------NGTIDGQGAIW----------------------------WNMWR 166
+D + G+ G +D G IW W+ R
Sbjct: 178 KKDKLTEGQWKKLVASGGVVDADGRIWYPSEGALKGAILSKDNFNVPRGELTDSDWDYMR 237
Query: 167 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 226
+ RP L+ F+ +++ F+NSP W +HP+ C N+ I VT+ P S N D
Sbjct: 238 D----WLRPVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYSQNGD 293
Query: 227 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 286
+D +S + I ++ GDD + +KSG DE G G P + + T G V
Sbjct: 294 ALDLESCNKALIINNSFDAGDDGICIKSGKDEQGRKRGEPCQNVIVMNNTVLHGHGGFVV 353
Query: 287 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 335
GSE SGGV N+ ++ VG+ K+N GRGG + NI +S++ M N
Sbjct: 354 GSEMSGGVNNIYVDNCTFMGTDVGLRFKSNRGRGGLVENIYISNINMIN 402
>gi|452958539|gb|EME63892.1| endopolygalacturonase [Amycolatopsis decaplanina DSM 44594]
Length = 453
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 178/387 (45%), Gaps = 36/387 (9%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
SI DFG GDGKT NT A R+AI + GG + VP G ++TG+ L S + L+L
Sbjct: 57 FSILDFGARGDGKTDNTAAIRKAI---ETANARGGGHVVVPRGTFVTGAVYLKSDVDLHL 113
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
A GAV+ D +P + L Y G E M + + + ++ +TG+ GT+D G
Sbjct: 114 AAGAVLAFDSDASKFPNV--LTRY-EGIECVNRSPMIYAYKE--SNIAVTGQ-GTLDAAG 167
Query: 159 AIWWNMWR----------------QRTLPFT----RPNLIEFMNSRSIIISNVIFQNSPF 198
WN + +R +P + R +E + +++I + +N F
Sbjct: 168 TASWNKGKDREYLESLVAKGIPPERRIVPGSGHTMRSTFVEPYSCDTVLIQGITLKNPMF 227
Query: 199 WNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDE 258
W +HP C NV I V A NTD DP+S +V I +S++ DD +A+KSG D
Sbjct: 228 WQLHPTLCRNVTIDGVRTDASTAHSNTDACDPESCDHVVIVNSHLGAHDDNIALKSGRDA 287
Query: 259 YGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLY-NVGVGIHVKTNI 317
G G P I + + I GSE +GG+ +V A + + G++VK+N
Sbjct: 288 DGRRVGVPCRNIVVANCVMDGNWGAITCGSEQTGGIRDVYAYKLTVTGETKYGLYVKSNT 347
Query: 318 GRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQ 377
RGGF N+ + V R + + D + +P T+ + GT+ Q
Sbjct: 348 LRGGFTENVNLDSVSGTFGRSVVYVLPDYNGQTGEY-----VPRFGPFTLGNSTGTRCGQ 402
Query: 378 SGL-IQGLKNSPFTGICLSNINLQGVA 403
+ ++GL NS G+ + + GVA
Sbjct: 403 AAFDVRGLPNSHVRGLRVRDCRFDGVA 429
>gi|237708712|ref|ZP_04539193.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|265756017|ref|ZP_06090484.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|345513499|ref|ZP_08793020.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|423242356|ref|ZP_17223465.1| hypothetical protein HMPREF1065_04088 [Bacteroides dorei
CL03T12C01]
gi|229437348|gb|EEO47425.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|229457138|gb|EEO62859.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|263234095|gb|EEZ19696.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|392639642|gb|EIY33458.1| hypothetical protein HMPREF1065_04088 [Bacteroides dorei
CL03T12C01]
Length = 539
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 153/349 (43%), Gaps = 59/349 (16%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
++I DFG DG TLNTKA +AI Q + GG + +P G++LTG L S++ LY
Sbjct: 61 VNIIDFGAKPDGITLNTKAINDAI---QQVNAKGGGKVIIPEGLWLTGPIELLSNVNLYT 117
Query: 99 AKGAVIKATQDTWNWPLI-----------APLPSYGRGRERPGGRYMSFIHGDG------ 141
K A++ + D +P+I P R E G+G
Sbjct: 118 EKNALVLFSADHSLYPIINTSFEGLETRRCQSPISARNAENIAITGHGVFDGNGDTWRPT 177
Query: 142 LQDVVITGE-------NGTIDGQGAIW----------------------------WNMWR 166
+D + G+ G +D G IW W+ R
Sbjct: 178 KKDKLTEGQWKKLIASGGVVDADGRIWYPSEGALKGAILSKDNFNVPRGELTDSDWDYMR 237
Query: 167 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 226
+ RP L+ F+ +++ F+NSP W +HP+ C N+ I VT+ P S N D
Sbjct: 238 D----WLRPVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYSQNGD 293
Query: 227 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 286
+D +S + I ++ GDD + +KSG DE G G P + + T G V
Sbjct: 294 ALDLESCNKALIINNSFDAGDDGICIKSGKDEQGRKRGEPCQNVIVMNNTVLHGHGGFVV 353
Query: 287 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 335
GSE SGGV N+ ++ VG+ K+N GRGG + NI +S++ M N
Sbjct: 354 GSEMSGGVNNIYVDNCTFMGTDVGLRFKSNRGRGGLVENIYISNINMIN 402
>gi|315497213|ref|YP_004086017.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
gi|315415225|gb|ADU11866.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
Length = 466
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 120/436 (27%), Positives = 194/436 (44%), Gaps = 68/436 (15%)
Query: 30 VPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFN 89
VP R + ITDFG D + T A +AI R+G + VP G++ TG N
Sbjct: 46 VPDFSRAQRFPITDFGASTDDQAATTAAIAKAIDAAH---RAGSGNVIVPQGIWPTGKIN 102
Query: 90 LTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITG 149
L SH+ L+L+KGA + ++ ++ + P+ + G E Y ++ ++V ++G
Sbjct: 103 LKSHVNLHLSKGATLLFSEKPEDY--LPPVQTSWEGIE--CFNYSPLVYAFDCENVGLSG 158
Query: 150 ENGTIDGQGAIWWNMWRQRTLPFT----------------------------RPNLIEFM 181
E G + + +W +W +R P RP+ ++F
Sbjct: 159 E-GKLKAKLDVW-QVWYKRPKPHMDALVRLYDLAYKGVPVEARQMVEGENHLRPHFVQFN 216
Query: 182 NSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDS 241
R ++I ++ ++SPFW IHP+ C +VVIR V + A N DG+DP+ S NV IED
Sbjct: 217 RCRHVLIEDISIEDSPFWTIHPLLCRDVVIRRVKVRAHGH--NNDGVDPEMSQNVLIEDC 274
Query: 242 YISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEH 301
GDD V+VKSG D P+ + +R + +AVGSE SGG+EN+ ++
Sbjct: 275 VFDQGDDAVSVKSGRDMDAWRLNTPTKNVVMRNCRIKNGHQLMAVGSELSGGIENIFVDN 334
Query: 302 INLYNVGVG-----------IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 350
+ G G ++VKTN RGG+++NI + +V KI G +
Sbjct: 335 CHFVGDGKGDDGWAVPINNLLYVKTNERRGGYVKNIHMRNV------SATKIQGSLLAVE 388
Query: 351 DDKFNP---------NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 401
D L + G+ + DV + + LI+ + P + L +
Sbjct: 389 TDVLYQWRTLLPTYVRKLTPIEGLYLSDVRVEEAKHLCLIKAETDMPVKTVSLRRLRANT 448
Query: 402 VAGPTSPPLKCSDVSG 417
+ T +K +V G
Sbjct: 449 L---TDTAIKTQNVQG 461
>gi|293375683|ref|ZP_06621956.1| polygalacturonase (pectinase) [Turicibacter sanguinis PC909]
gi|292645734|gb|EFF63771.1| polygalacturonase (pectinase) [Turicibacter sanguinis PC909]
Length = 526
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 155/312 (49%), Gaps = 24/312 (7%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+++ F GDG T +T A + AI R +++P G Y T + L S++TL L
Sbjct: 84 LNVKHFNAKGDGITDDTLAIQAAIMSCPDDGR-----VFIPKGTYATKTIFLKSNLTLEL 138
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRER-----------PGGRYMSFIHGDGLQDVVI 147
KGA + + ++ A LP Y + P + + I G + +V +
Sbjct: 139 EKGATLLYSA---SFESGAILPGYTKNSNHEEYYLGSWEGNPLDTFTALIQGVNVSNVNL 195
Query: 148 TGENGTIDGQGAI-WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYC 206
GE G +DG G+I WW+ + R + + RP L + ++S + + + QNSP W +HP++
Sbjct: 196 IGE-GVLDGNGSIGWWDFPKVRNVAW-RPRLFQIIHSHHVNVQGITLQNSPSWTVHPLFS 253
Query: 207 SNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHP 266
++ + I+ P DSPNTDG+DP+S V I + S GDD +A+KSG G
Sbjct: 254 DDLKFIDLKIINPKDSPNTDGLDPESCHRVLILGVHFSVGDDCIAIKSGKIYLGSRLKRA 313
Query: 267 SSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG--GFIR 324
S ITIR + + + +GSE +GGV+++L E G+ +KT GRG +
Sbjct: 314 SEYITIRNCSMNFGHGAVVIGSEMAGGVKHILVEQCLFNETDRGLRIKTRRGRGEAAIVE 373
Query: 325 NITVSDVYMENA 336
++T + ME
Sbjct: 374 DVTFRHIEMEKV 385
>gi|423228811|ref|ZP_17215217.1| hypothetical protein HMPREF1063_01037 [Bacteroides dorei
CL02T00C15]
gi|423247623|ref|ZP_17228671.1| hypothetical protein HMPREF1064_04877 [Bacteroides dorei
CL02T12C06]
gi|392631516|gb|EIY25487.1| hypothetical protein HMPREF1064_04877 [Bacteroides dorei
CL02T12C06]
gi|392635550|gb|EIY29449.1| hypothetical protein HMPREF1063_01037 [Bacteroides dorei
CL02T00C15]
Length = 539
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 153/349 (43%), Gaps = 59/349 (16%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
++I DFG DG TLNTKA +AI Q + GG + +P G++LTG L S++ LY
Sbjct: 61 VNIIDFGAKPDGITLNTKAINDAI---QQVNAKGGGKVIIPEGLWLTGPIELLSNVNLYT 117
Query: 99 AKGAVIKATQDTWNWPLI-----------APLPSYGRGRERPGGRYMSFIHGDG------ 141
K A++ + D +P+I P R E G+G
Sbjct: 118 EKNALVLFSADHSLYPIINTSFEGLETRRCQSPISARDAENIAITGHGVFDGNGDTWRPT 177
Query: 142 LQDVVITGE-------NGTIDGQGAIW----------------------------WNMWR 166
+D + G+ G +D G IW W+ R
Sbjct: 178 KKDKLTEGQWKKLIASGGVVDADGRIWYPSEGALKGAILSKDNFNVPRGELTDSDWDYMR 237
Query: 167 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 226
+ RP L+ F+ +++ F+NSP W +HP+ C N+ I VT+ P S N D
Sbjct: 238 D----WLRPVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYSQNGD 293
Query: 227 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 286
+D +S + I ++ GDD + +KSG DE G G P + + T G V
Sbjct: 294 ALDLESCNKALIINNSFDAGDDGICIKSGKDEQGRKRGEPCQNVIVMNNTVLHGHGGFVV 353
Query: 287 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 335
GSE SGGV N+ ++ VG+ K+N GRGG + NI +S++ M N
Sbjct: 354 GSEMSGGVNNIYVDNCTFMGTDVGLRFKSNRGRGGLVENIYISNINMIN 402
>gi|421083085|ref|ZP_15543964.1| Glycoside hydrolase family 28 [Pectobacterium wasabiae CFBP 3304]
gi|401702311|gb|EJS92555.1| Glycoside hydrolase family 28 [Pectobacterium wasabiae CFBP 3304]
Length = 460
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/441 (28%), Positives = 201/441 (45%), Gaps = 52/441 (11%)
Query: 2 FRFLVTLSILLSYFNCFSLA-SVVTCSGIVPMRYRNDKISITDFGGVGD--GKTLNTKAF 58
R + LS++ S C +L T +++ + +T +G G LNT+AF
Sbjct: 1 MRSGLALSLMAS---CITLGIQAGTAQAASSVKFPDKTCDVTQYGAEGHRLQIALNTEAF 57
Query: 59 REAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAP 118
++AI +GG ++VP G YL L S++ L LAK A I A+ + +
Sbjct: 58 QKAI---DDCAAAGGGTVHVPRGNYLVDPLFLKSNIRLDLAKDATIVASTEVAAYRATEK 114
Query: 119 LPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPF------ 172
+ E G ++ FI Q+V ITG+ GTIDGQGA+WW WR+
Sbjct: 115 T----KYAEAENG-WLPFISIADAQNVAITGQ-GTIDGQGAVWWERWRENIRATGKKGGT 168
Query: 173 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDS 232
RP LI +S ++++ V +SP +++ Y +V + IL+P +PNTD IDP
Sbjct: 169 DRPRLIYIKSSSNVLVDGVTLTHSPSFHVVMRYSHDVDVNGTRILSPWHAPNTDAIDPID 228
Query: 233 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSG 292
S N+ I ++YI DD +A+K+ + G + + GI++GSETSG
Sbjct: 229 SQNIRITNNYIDCNDDHIAIKAEKPDSRFPNGVVDNIYIANNILKQG--RGISIGSETSG 286
Query: 293 GVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG-------- 344
GV NVL E+ GI +KT G+GG ++NIT + M + + A
Sbjct: 287 GVNNVLVENNQFEGSMYGIRIKTLRGKGGEVKNITYRNTKMVDVEIPLVFAAYYKAAPIV 346
Query: 345 -------------DVGDH-------PDDKFNPNALPVVNGITIKDVWGT-KVQQSGLIQG 383
+G+ P+ F+ + P + +TI+++ T K + + I G
Sbjct: 347 QAEVDKMLAEGGFTMGEQIYPSDTDPEQPFDQHKTPHFSNVTIENLESTGKTKAAAYIIG 406
Query: 384 LKNSPFTGICLSNINLQGVAG 404
+ +P +G N+ + G
Sbjct: 407 VPEAPLSGFHFDNVRIDADKG 427
>gi|326790331|ref|YP_004308152.1| polygalacturonase [Clostridium lentocellum DSM 5427]
gi|326541095|gb|ADZ82954.1| Polygalacturonase [Clostridium lentocellum DSM 5427]
Length = 515
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/312 (33%), Positives = 157/312 (50%), Gaps = 26/312 (8%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+++ DFG VGDG T++T A + A + G+ + +P G Y L SHMTL L
Sbjct: 80 LNVKDFGAVGDGVTMDTAAIQAA-----IMAAPKGSRVVIPAGTYKILPLFLKSHMTLEL 134
Query: 99 AKGAVIKATQDTWNWPL-----------IAPLPSYGRGRERPGGRYMSFIHGDGLQDVVI 147
+GA + A D ++P+ IA L S+ Y S I G G++DV I
Sbjct: 135 LEGATLLAHTDRKDYPILPGKMILEDGSIAYLASW---EGDMADCYASIITGIGVRDVRI 191
Query: 148 TGENGTIDG--QGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVY 205
G+ GTIDG Q A WW + + + RP + ++ +++ + +NSP W +HPV
Sbjct: 192 IGQ-GTIDGNGQNADWWVDCKVKRGAW-RPRSLYLVDCEDVVVEGITIKNSPSWTVHPVR 249
Query: 206 CSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH 265
+ + +T+ P DSPNTDGIDP+S + V I S GDD +A+KSG +
Sbjct: 250 STKLRFINLTLNNPKDSPNTDGIDPESCNGVEIIGVKFSLGDDCIAIKSGKISVPVDMRR 309
Query: 266 PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRN 325
PS I IR G+ +GSE SGG+++V E N G+ +KT GRG
Sbjct: 310 PSENIIIRNCLMEYGHGGVVLGSEMSGGIKHVYVERCFFRNTDRGLRIKTRRGRGN---T 366
Query: 326 ITVSDVYMENAR 337
+ ++Y++N +
Sbjct: 367 AVIDEIYIKNIK 378
>gi|397691596|ref|YP_006528850.1| glycoside hydrolase family 28 [Melioribacter roseus P3M]
gi|395813088|gb|AFN75837.1| glycoside hydrolase family 28 [Melioribacter roseus P3M]
Length = 463
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/383 (28%), Positives = 172/383 (44%), Gaps = 50/383 (13%)
Query: 65 IQHLRRSGGTLLYVPPGVY-LTGSFNLTSHMTLYLAKGAVIKATQDTWNW-PLIAPLPSY 122
I+ +SGG + +P GVY G + S++ L+L K AV+ + + ++ P++ +
Sbjct: 71 IEECGKSGGGKIIIPEGVYKCNGPIHFKSNINLHLEKNAVVLFSTNPKDYLPVV-----F 125
Query: 123 GRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAI--WWNMWRQRTLP--------- 171
R Y I+G + +V ITGE G DG + WW W+ R P
Sbjct: 126 TRWEGVECYNYSPLIYGFEVDNVAITGE-GVFDGMASDENWWK-WKGRKNPKDDETQNNP 183
Query: 172 -------------------------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYC 206
+ RPN ++F S++I+I V F+NSP W +HPV
Sbjct: 184 NSRPRLFEMNNQDVPVDKRVFGEGHYLRPNFVQFYKSKNILIEGVTFKNSPMWFLHPVLS 243
Query: 207 SNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHP 266
N++IR V + PN DG DP+S NV IE Y GDD +A+KSG + G P
Sbjct: 244 ENIIIRNVKTI--GHGPNNDGCDPESCKNVLIEGCYFDNGDDCIAIKSGRNNDGRRINAP 301
Query: 267 SSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIR 324
S I IR T G+ +GSE SGG V AE + N+ + +K+N RGG +
Sbjct: 302 SENIIIRNCTMKDGHGGVVIGSEISGGCRFVFAEECKMDSPNLDRMLRIKSNTVRGGVVE 361
Query: 325 NITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGL 384
++ V ++ + I + ++ P + + P I +++V K + GL
Sbjct: 362 HVYVRNIEVGEVSNAI-VRMNMFYDPKEIGPRDFPPKFRNIRVENVTSRKSDYALEFLGL 420
Query: 385 KNSPFTGICLSNINLQGVAGPTS 407
+ SP + + N + GV S
Sbjct: 421 EESPIENVEIINCDFNGVKKENS 443
>gi|182416077|ref|YP_001821143.1| glycosyl hydrolase [Opitutus terrae PB90-1]
gi|177843291|gb|ACB77543.1| glycosyl hydrolase family 88 [Opitutus terrae PB90-1]
Length = 865
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 117/413 (28%), Positives = 186/413 (45%), Gaps = 60/413 (14%)
Query: 29 IVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSF 88
I P + + ITDFG D T A R AI ++GG + VP G +LTG+
Sbjct: 438 IQPPTFPDRDFPITDFGAKPDADC--TDAIRAAI---DACHQAGGGRVVVPAGEWLTGAI 492
Query: 89 NLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVIT 148
+L S++ L++AKGA ++ D +P++ + R + FI+ +++ IT
Sbjct: 493 HLRSNVNLHVAKGATLRWVFDLAKYPIV-----FTRWEGVECMNFSPFIYAWEQENIAIT 547
Query: 149 GENGTIDGQGAIW-----WNMWRQRTLP----------------------------FTRP 175
GE GT+DG G+ W WN R T P F RP
Sbjct: 548 GE-GTLDG-GSDWSTWWGWNDKRDGTAPKQRAARNRLIQMGETNVPVAERVFGANDFLRP 605
Query: 176 NLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSN 235
N ++ ++I+I V SP W +HPV N+ +R V I + PN DG DP+S +
Sbjct: 606 NFVQPYRCKNILIEGVSIIRSPMWELHPVLSQNITVRNVKIT--SHGPNNDGFDPESCRD 663
Query: 236 VCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVE 295
+ +ED+ TGDD +A+KSG + G P+ + IRR G+ +GSE +GG+
Sbjct: 664 ILVEDTLFDTGDDCIAIKSGRNGDGRRVNVPTENMVIRRCVMKDGHGGVVLGSECTGGIR 723
Query: 296 NVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDK 353
N+ E + ++ G+ K N RGG + N V+M N + G G+ D
Sbjct: 724 NIFVEDCEMDSPDLDRGLRFKNNAVRGGVLEN-----VFMRNVKIG--RVGEAVLTIDLL 776
Query: 354 FNPNA----LPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 402
+ A P+V + ++++ + + I+G + I +SN V
Sbjct: 777 YEEGAKGAFKPIVRNVQMENITSSASPRVMYIRGFPGAVIEDIRISNSTFNSV 829
>gi|336314135|ref|ZP_08569056.1| endopolygalacturonase [Rheinheimera sp. A13L]
gi|335881648|gb|EGM79526.1| endopolygalacturonase [Rheinheimera sp. A13L]
Length = 479
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 120/404 (29%), Positives = 184/404 (45%), Gaps = 65/404 (16%)
Query: 41 ITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAK 100
IT FG + + KA EAI ++GG + VP GV+ TG +L S++ L+L K
Sbjct: 63 ITAFGAKQNQRC--DKAITEAIAACH---KAGGGRVVVPEGVWSTGPVHLKSNVNLHLQK 117
Query: 101 GAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ--G 158
AV+ D + + + + G E G + I+ Q++ +TGE G ++G G
Sbjct: 118 NAVLSFVTDPQAY--LPEVFTRWEGVELMG--FSPLIYAYQQQNIAVTGE-GILEGNASG 172
Query: 159 AIWW---NMWRQ---RTLPFT-----------------------------RPNLIEFMNS 183
WW +W+ + P T RP I+
Sbjct: 173 ENWWPWKGVWKHTPWKLDPATDQKPGRDQLFAMAEAGVPVEKRYLDNNRLRPPFIQPYGC 232
Query: 184 RSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYI 243
++I V +NSPFW I+PV C +VVIR V ++ PN+DG DP+S V IE+
Sbjct: 233 ERVLIEGVTIRNSPFWLINPVLCKDVVIRGVNCVS--FGPNSDGCDPESCQRVLIENCLF 290
Query: 244 STGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHIN 303
TGDD +A+KSG + G P + I+ S G+ +GSE SGG + + A
Sbjct: 291 DTGDDCIALKSGRNAEGRRLATPIQQVVIQDCLMKSGHGGVVIGSEISGGAKQIFARRCR 350
Query: 304 LY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-----AGDVGDHPDDKFNP 356
+ N+ G+ +KTN RGG I I V D+ + + I I GD G
Sbjct: 351 MSSPNLERGLRIKTNSVRGGLIEQIAVDDIEIGEVKDAIVINFYYEEGDAG--------- 401
Query: 357 NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 400
N LP V + I + K Q++ I+GL + +GI +S+++ +
Sbjct: 402 NFLPEVKDLKISNFRVKKAQRAFEIRGLPRAGISGIQMSDVSFE 445
>gi|433656005|ref|YP_007299713.1| endopolygalacturonase [Thermoanaerobacterium thermosaccharolyticum
M0795]
gi|433294194|gb|AGB20016.1| endopolygalacturonase [Thermoanaerobacterium thermosaccharolyticum
M0795]
Length = 519
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/385 (29%), Positives = 180/385 (46%), Gaps = 30/385 (7%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
I++ DFG GDGK ++T + + AI + G ++ G+YLT L S++TL L
Sbjct: 84 INVRDFGANGDGKRIDTFSIQAAI-----ISCPDGGRVFFHEGIYLTYPLFLKSNITLEL 138
Query: 99 AKGAVIKATQDTWNWPLI-------APLPSY-GRGRERPGGRYMSFIHGDGLQDVVITGE 150
KGAV+ ++ +P++ SY G + S I G G+++V I GE
Sbjct: 139 GKGAVLLGAKEREMYPILPGEIDCKKIEDSYLGSWEGEAKEIFASLITGIGVENVNIIGE 198
Query: 151 NGTIDGQGAI--WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 208
GTIDG + WW+ + + + + RP I ++++I + +NSP W IHP+ N
Sbjct: 199 -GTIDGNSSFDTWWHDAKVKRIAW-RPRTIFLNKCKNVLIEGITIKNSPSWTIHPLLSQN 256
Query: 209 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 268
+ + I P D+PNTDG+DP+S +V I + S GDD +A+KSG S
Sbjct: 257 LKFINLNIENPKDAPNTDGLDPESCKDVVILGTRFSVGDDCIAIKSGKLATSRKLPVSSE 316
Query: 269 GITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG--GFIRNI 326
+ IR + +GSE SGGV+NV + GI +KT GRG G I I
Sbjct: 317 NLYIRNCLMEYGHGAVVIGSEMSGGVKNVHVDRCVFRKTDRGIRIKTRRGRGSTGIIDEI 376
Query: 327 TVSDVYMENARKGIKIAG----DVGDHPDDKFNPNALPV------VNGITIKDVWGTKVQ 376
S++ M+ I D + ++ LPV + I +KD+ Q
Sbjct: 377 HASNIKMDKVLTPFTINSFYFCDADGKTEYVWSKEKLPVDDRTPYIGNIYLKDITCNDTQ 436
Query: 377 -QSGLIQGLKNSPFTGICLSNINLQ 400
+G + GL + + NI ++
Sbjct: 437 VAAGYMYGLPERKIEKVTMENIYIK 461
>gi|224540752|ref|ZP_03681291.1| hypothetical protein BACCELL_05666 [Bacteroides cellulosilyticus
DSM 14838]
gi|423224671|ref|ZP_17211139.1| hypothetical protein HMPREF1062_03325 [Bacteroides cellulosilyticus
CL02T12C19]
gi|224517619|gb|EEF86724.1| hypothetical protein BACCELL_05666 [Bacteroides cellulosilyticus
DSM 14838]
gi|392635111|gb|EIY29017.1| hypothetical protein HMPREF1062_03325 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 467
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/389 (30%), Positives = 184/389 (47%), Gaps = 55/389 (14%)
Query: 41 ITDFGGVGDGKTLNT-KAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
ITDFG D +A +AI + GGT++ VP G + TG L S++ ++
Sbjct: 50 ITDFGAKPDTPDAPCHEAINQAI--VTCCLNGGGTVV-VPKGTFYTGPITLKSNVNFHVE 106
Query: 100 KGAVIK-ATQDTWNWP-LIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
+GAV+K +T + +P +I RP I+ G ++ ITG+ GTIDGQ
Sbjct: 107 EGAVLKFSTDQSLYFPGVITRWEGIDCYNARP------LIYAYGETNIAITGK-GTIDGQ 159
Query: 158 GA--IWWNM-------W-----------RQRTLPF-----------------TRPNLIEF 180
G+ WW M W R+R L + RP LI
Sbjct: 160 GSNETWWPMCGAPRYGWKEGMVAQRNGGRERLLMYGETSTPIYKRVMTPEDGLRPQLINL 219
Query: 181 MNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIED 240
+ +++I +V NSPFW IHP++C ++ +R V + PN DG DP+S NV IE+
Sbjct: 220 YSCNTVLIEDVTLLNSPFWVIHPLFCESLTVRGVYVYNRG--PNGDGCDPESCKNVLIEN 277
Query: 241 SYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAE 300
TGDD +A+KSG ++ G +G PS I +R G+ +GSE SGG N+ E
Sbjct: 278 CTFDTGDDCIAIKSGRNQDGRKWGVPSENIIVRGCYMKKGHGGVVIGSEISGGYRNLYVE 337
Query: 301 HINLYNVGVG--IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNA 358
+ + + + I +KT+ RGG I N+ V +V + R+ + + ++ + N
Sbjct: 338 NCKMDSPDLDRVIRIKTSTCRGGLIENVFVRNVTVGQCREAV-LRINLQYENRENCNRGF 396
Query: 359 LPVVNGITIKDVWGTKVQQSGLIQGLKNS 387
P V + +K+V K + LI GL +
Sbjct: 397 TPTVRNVHLKNVTCEKSKLGVLIIGLDDD 425
>gi|325679916|ref|ZP_08159485.1| polygalacturonase (pectinase) [Ruminococcus albus 8]
gi|324108354|gb|EGC02601.1| polygalacturonase (pectinase) [Ruminococcus albus 8]
Length = 513
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/343 (30%), Positives = 164/343 (47%), Gaps = 32/343 (9%)
Query: 16 NCFSLASV-------VTCSGIVPMRYRNDK----ISITDFGGVGDGKTLNTKAFREAIYR 64
N FSL + V +G P+ ++ K +S+ DFG VGDG +T + + A+
Sbjct: 43 NVFSLFDLEPHTDYTVEVTGHDPLSFKTAKETSAVSVKDFGAVGDGVADDTLSIQTAV-- 100
Query: 65 IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLI-APLPSYG 123
+ +GG L + P G YLTG NL SH+T+ + A + T D +P I +
Sbjct: 101 --NCLPAGGRLRF-PEGTYLTGPINLKSHITIEFTEKATLLGTTDMARYPKIPGVITDLV 157
Query: 124 RGRERPGG--------RYMSFIHGDGLQDVVITGENGTIDG--QGAIWWNMWRQRTLPFT 173
G E G + + + + +D+ I G GT+DG Q + WW + + +P
Sbjct: 158 TGEEVHFGTWEGNAVPMHQALLFAEYAEDIKIVGR-GTVDGNAQNSQWWVDVKNQEVP-- 214
Query: 174 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 233
RP LI F + + + + QN+ W +HP + + + +++ AP DSPNTD +DP++
Sbjct: 215 RPRLIFFNRCKLVTVHGITAQNAASWQLHPYFSTELQFLDLSVNAPKDSPNTDALDPEAC 274
Query: 234 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 293
V I S GDD +A+KSG E G + P++ TIR I +GSE +GG
Sbjct: 275 DTVNIVGCRFSVGDDCIAIKSGKIEIGRKFKQPANRHTIRNCIMQFGHGAITLGSEMAGG 334
Query: 294 VENVLAEHINLYNVGVGIHVKTNIGRG--GFIRNITVSDVYME 334
V+N+ G+ +KT GRG I I ++ M+
Sbjct: 335 VKNLSVSRCIFKETDRGLRIKTRRGRGKDAVIDGIEFKNIKMD 377
>gi|294778294|ref|ZP_06743720.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294447922|gb|EFG16496.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 539
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 153/349 (43%), Gaps = 59/349 (16%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
++I DFG DG TLNTKA +AI Q + GG + +P G++LTG L S++ LY
Sbjct: 61 VNIIDFGAKPDGITLNTKAINDAI---QQVNAKGGGKVIIPEGLWLTGPIELLSNVNLYT 117
Query: 99 AKGAVIKATQDTWNWPLI-----------APLPSYGRGRERPGGRYMSFIHGDG------ 141
K A++ + D +P+I P R E G+G
Sbjct: 118 EKNALVLFSADHSLYPIINTSFEGLETRRCQSPISARNAENIAITGHGVFDGNGDTWRPT 177
Query: 142 LQDVVITGE-------NGTIDGQGAIW----------------------------WNMWR 166
+D + G+ G +D G IW W+ R
Sbjct: 178 KKDKLTEGQWKKLVASGGVVDTDGRIWYPSEGALKGAILSKDNFNVPRGELTDSDWDYMR 237
Query: 167 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 226
+ RP L+ F+ +++ F+NSP W +HP+ C N+ I VT+ P S N D
Sbjct: 238 D----WLRPVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYSQNGD 293
Query: 227 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 286
+D +S + I ++ GDD + +KSG DE G G P + + T G V
Sbjct: 294 ALDLESCNKALIINNSFDAGDDGICIKSGKDEQGRKRGEPCQNVIVMNNTVLHGHGGFVV 353
Query: 287 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 335
GSE SGGV N+ ++ VG+ K+N GRGG + NI +S++ M N
Sbjct: 354 GSEMSGGVNNIYVDNCTFMGTDVGLRFKSNRGRGGLVENIYISNINMIN 402
>gi|373469919|ref|ZP_09561077.1| polygalacturonase [Lachnospiraceae bacterium oral taxon 082 str.
F0431]
gi|371763536|gb|EHO52007.1| polygalacturonase [Lachnospiraceae bacterium oral taxon 082 str.
F0431]
Length = 526
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 178/386 (46%), Gaps = 31/386 (8%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+++ DFG GDG ++ + AI + GT+ Y+P G YL L S++ L++
Sbjct: 83 LNVKDFGAAGDGVKTDSVCIQAAI----NACPKDGTV-YIPKGKYLCTPVFLKSNIDLWI 137
Query: 99 AKGAVIKATQDTWNWPLIAPLP---------SYGRGRERPGGRYMSFIHGDGLQDVVITG 149
K A++ +D +P++ + + G P + + I G +++V+I G
Sbjct: 138 DKDAILIGEKDRKKYPILPGMTQSSDENDEYNIGSWEGNPLDCFAALITGISVENVLIFG 197
Query: 150 ENGTIDGQGAI--WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCS 207
E G +DG + WW +++ + + RPN + N ++I + + NSP W +HP Y
Sbjct: 198 E-GILDGNAGMLDWWKDAKKKNIAW-RPNTVFLYNCKNIAMQGLCIMNSPSWTLHPYYSD 255
Query: 208 NVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPS 267
N++ TI+ P +SPNTDG+DP+S NV I + IS GDD VA+KSG + + P+
Sbjct: 256 NLLFLNNTIMNPDNSPNTDGLDPESCENVLILGADISVGDDCVAIKSGKYYMALKHYKPA 315
Query: 268 SGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG--GFIRN 325
I IR + +GSE + GV +V G+ +KT GRG + N
Sbjct: 316 KNIVIRNSIFRKGHGSVTIGSEVAAGVYDVRVGKCIFEGTDRGLRIKTRRGRGEKSVLDN 375
Query: 326 ITVSDVYMENA----RKGIKIAGDVGDHPD-----DKFNPNA-LPVVNGITIKDVWGTKV 375
I ++ M++ + D H D DK N P + I +D+ V
Sbjct: 376 ICFENILMKDVCMPFTANMFYFCDPDGHSDYVQNQDKMEVNEKTPKIGKIAARDIRCENV 435
Query: 376 QQ-SGLIQGLKNSPFTGICLSNINLQ 400
+ + GL P I L NI L
Sbjct: 436 KNIFACLYGLPEMPVEEIVLENITLN 461
>gi|255536015|ref|YP_003096386.1| glycoside hydrolase, family 28 [Flavobacteriaceae bacterium
3519-10]
gi|255342211|gb|ACU08324.1| glycoside hydrolase, family 28 [Flavobacteriaceae bacterium
3519-10]
Length = 491
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 118/423 (27%), Positives = 197/423 (46%), Gaps = 72/423 (17%)
Query: 33 RYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTS 92
++R+ +I +G V DGKT+ T++ R+AI + GG + VP G +L+G +L +
Sbjct: 63 KFRDANYNIVSYGAVADGKTMATESIRKAILACS---KDGGGKVIVPSGKFLSGPIHLEN 119
Query: 93 HMTLYLAKGA-VIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGEN 151
++ L+L +GA ++ +T +PL+ + G E Y I+ +++ +TG+
Sbjct: 120 NVNLHLMEGAEILFSTNPDDFYPLVH---TSFEGMELMN--YSPLIYAKNKKNIAVTGK- 173
Query: 152 GTIDGQGA--IWWNMWR----------------------------------QRTL---PF 172
G ++GQ + WW W+ RT +
Sbjct: 174 GILNGQASNDNWW-TWKGSSAYGFKPGMPSQLDPNNLPKLMEMADTNVPVSNRTFGNGRY 232
Query: 173 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDS 232
RPN IE +++I + N+PFW +HP+ N+++ V I + PN DG+DP+
Sbjct: 233 LRPNFIEPFECENVLIQGITIINAPFWILHPIKSKNIIVDGVNIR--SHGPNNDGLDPEY 290
Query: 233 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSG 292
S NV I++S +TGDD +A+K+G DE G G + I +R G+ +GSE S
Sbjct: 291 SQNVLIKNSIFNTGDDCIAIKAGRDEEGRRVGIMTENIIVRDCKMIDGHGGVVIGSEMSA 350
Query: 293 GVENVLA--EHINLYNVGVGIHVKTNIGRGG-----FIRNITVSDVYMENARKGIKIAGD 345
GV NV H++ + I +KTN RGG +++N+TV +V + I +
Sbjct: 351 GVRNVFVYNNHMDSPELDRAIRLKTNNVRGGVVDGVYVKNLTVGEV----KEAVLHITMN 406
Query: 346 VGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSG----LIQGLKNSPFTGICLSNINLQG 401
D+ + N P + I ++DV KV+ G GL+NS I N+ +
Sbjct: 407 YKDYKNR--TGNFTPQIRNILLEDV---KVKNGGKYAIFADGLENSKIQNITFKNVTIDK 461
Query: 402 VAG 404
V
Sbjct: 462 VKA 464
>gi|254444100|ref|ZP_05057576.1| Polygalacturonase superfamily [Verrucomicrobiae bacterium DG1235]
gi|198258408|gb|EDY82716.1| Polygalacturonase superfamily [Verrucomicrobiae bacterium DG1235]
Length = 476
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 113/383 (29%), Positives = 182/383 (47%), Gaps = 58/383 (15%)
Query: 65 IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPS-YG 123
I+ GG + VP G Y TG +L S++ L++A+GA +K + + ++ LP+ +
Sbjct: 83 IEACNAGGGGTVLVPAGTYHTGPVHLLSNVNLHVAEGATLKFSTEAKDY-----LPAVFT 137
Query: 124 RGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAI-WWNMWRQRTLP----------- 171
R Y I+ ++ +TG+ GT+DGQ ++ W W ++ P
Sbjct: 138 RWEGVECYNYSPLIYAFEQTNIAVTGK-GTLDGQASLDNWLDWNVKSAPGGSKQIPARNR 196
Query: 172 --------------------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVI 211
F RPN ++ +++I +V NSP W IHPV NV +
Sbjct: 197 LIEYGAKGTPVDERVFGEGDFLRPNFLQPYRCDNVLIEDVTIINSPMWEIHPVLSRNVTV 256
Query: 212 RYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGIT 271
R VT++ + N DG +P+SS +V IE+ TGDD +A+KSG + G PS I
Sbjct: 257 RGVTVV--SHGSNNDGCNPESSKDVLIENCVFDTGDDCIAIKSGRNNDGRRVNVPSENII 314
Query: 272 IRRVTGSSPFSGIAVGSETSGGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVS 329
+R G+ +GSE SGGV NV E+ + N+ + +KTN RGG I N+ V
Sbjct: 315 VRNCKMKDGHGGVVIGSEISGGVRNVFVENCEMSSPNLDRALRIKTNSIRGGLIENVFVR 374
Query: 330 DVYMENARKG-IKI-----AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQG 383
DV + + IK+ GD GD PVV + ++ + + + + ++G
Sbjct: 375 DVEVGVVKDSVIKVNFLYEEGDAGDFA---------PVVRNVVVRRLTSRESKYALFLKG 425
Query: 384 LKNSPFTGICLSNINLQGVAGPT 406
+++P TGI L + +GV P+
Sbjct: 426 YEHTPITGIRLIDCQFEGVQRPS 448
>gi|407791858|ref|ZP_11138936.1| polygalacturonase [Gallaecimonas xiamenensis 3-C-1]
gi|407198911|gb|EKE68937.1| polygalacturonase [Gallaecimonas xiamenensis 3-C-1]
Length = 495
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 118/415 (28%), Positives = 190/415 (45%), Gaps = 55/415 (13%)
Query: 33 RYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTS 92
++ I+DFG V GK LN+ A AI +GG + VP G +LTG+ +L S
Sbjct: 67 KFAERDFPISDFGAVPGGKVLNSDAIAAAIAACAA---AGGGRVRVPQGRFLTGAIHLKS 123
Query: 93 HMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENG 152
++ L+L KGAV+ + + ++ + + + G E G I+ G +++ +TG+ G
Sbjct: 124 NVNLHLDKGAVLVFSPNPDHY--LPAVFTRWEGMEMMG--LSPLIYAYGQRNIAVTGQ-G 178
Query: 153 TIDG--QGAIWW--------NMWRQRTLP-----------------------------FT 173
+DG WW WRQ + F
Sbjct: 179 VLDGGADDNTWWPWKGPHPEGHWRQDPIAQTQKAARDKLQQEVLAGTDPRTRLHGQGSFL 238
Query: 174 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 233
RP I+ ++++I V NSPFW +HPV C +V +R VT + PN DG DP+
Sbjct: 239 RPAFIQPYLCQNVLIEGVTLVNSPFWLLHPVLCQSVTVRGVTCRS--HGPNNDGCDPECC 296
Query: 234 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 293
+V IE TGDD +A+KSG +E G G + +R G+ +GSE SGG
Sbjct: 297 DHVVIEGCTFDTGDDCIAIKSGRNEDGRRVGQACRNLVVRNCQMKDGHGGLVLGSEISGG 356
Query: 294 VENVLAEHINLYN--VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 351
V NV ++ + + + +KTN RGG I I + ++ + + + I + +
Sbjct: 357 VYNVFLDNCQMDSPELERAFRIKTNARRGGTIEGIRIRNLRVGEVKDAVSINFFYEEGQE 416
Query: 352 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPT 406
+F LP V I I ++ Q++ ++G ++P G+ LSN + VA P+
Sbjct: 417 GRF----LPEVRDIHIDNLVVRSAQRAFYLRGFASAPIEGVTLSNCRIDKVAAPS 467
>gi|380693930|ref|ZP_09858789.1| exo-poly-alpha-D-galacturonosidase [Bacteroides faecis MAJ27]
Length = 528
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 152/343 (44%), Gaps = 68/343 (19%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+++I+ FG GDG TLNTKA +AI + + + GG + +P G +LTG L S++ LY
Sbjct: 48 EVNISKFGAKGDGMTLNTKAINDAI---KEVNQRGGGKVIIPEGTWLTGPIELLSNVNLY 104
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITG-------- 149
+ A++ T D +P+I P+ G + R S I +++ ITG
Sbjct: 105 TERNALVLFTGDFEAYPII---PTSFEGLDTR--RCQSPISARDAENIAITGYGIFDGNG 159
Query: 150 ---------------------ENGTIDGQGAIW--------------------------- 161
G +D Q IW
Sbjct: 160 DCWRPVKKEKLTASQWNKLVKSGGVLDAQERIWYPTAGSLKGAMACKDFNVPEGINTDEE 219
Query: 162 WNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 221
WN R + RP L+ F+ S+ +++ V F+NSP W +HP+ C ++ + + ++ P
Sbjct: 220 WNEIR----AWLRPVLLSFVKSKKVLLEGVTFKNSPSWCLHPLSCEDITVNNIQVINPWY 275
Query: 222 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 281
S N D +D +S N I +S GDD + +KSG DE G G P + ++ T
Sbjct: 276 SQNGDALDLESCKNALIINSVFDAGDDAICIKSGKDENGRRRGEPCQNVIVKNNTVLHGH 335
Query: 282 SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 324
G VGSE SGGV+N+ E VG+ K+ GRGG +
Sbjct: 336 GGFVVGSEMSGGVKNIYVEDCTFLGTDVGLRFKSTRGRGGVVE 378
>gi|329957634|ref|ZP_08298109.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328522511|gb|EGF49620.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 533
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 155/350 (44%), Gaps = 68/350 (19%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+SI FG GDG TLNTKA +AI + + GG + +P G++LTG L S++ LY
Sbjct: 58 VSILQFGAKGDGTTLNTKAINDAI---KAVNAKGGGKVVIPEGLWLTGPIELLSNVNLYT 114
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
K A++ T D +P++ S+ R R S I +++ ITG +G DG G
Sbjct: 115 EKNALVVFTDDFNAYPILET--SFEGLNTR---RCQSPISARNTENIAITG-HGVFDGSG 168
Query: 159 ----------------------------AIW---------------------------WN 163
+IW WN
Sbjct: 169 DSWRPVKKSKLTASQWDALVKSGGVVDKSIWYPTAGSLKGALACKNFNNPEGIETDEEWN 228
Query: 164 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 223
R P+ RP L+ + S+ +++ V F+NSP W +HP+ C ++ I V + P S
Sbjct: 229 EIR----PWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINQVKVFNPWYSQ 284
Query: 224 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 283
N D +D +S N I ++ GDD + +KSG DE G G P + ++ T G
Sbjct: 285 NGDALDLESCKNALIINNIFDAGDDAICIKSGKDEDGRKRGEPCQNVIVKNNTVLHGHGG 344
Query: 284 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
VGSE SGGV+N+ VG+ K+ GRGG + I + +++M
Sbjct: 345 FVVGSEMSGGVKNIYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHM 394
>gi|346223842|ref|ZP_08844984.1| glycoside hydrolase family protein [Anaerophaga thermohalophila DSM
12881]
Length = 532
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 163/327 (49%), Gaps = 37/327 (11%)
Query: 36 NDKISITDFGGVGDGKTLNTKAFREAIYR-IQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
N I DFG + T +AI++ I SGG + VP G +LTG +L S++
Sbjct: 63 NKTFDIRDFGA-KEMDADKTNKCTDAIHKAIDAASESGGGTVLVPAGQWLTGPVHLKSNI 121
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
L+L K A + ++D ++ + +P G E Y I+ + +V ITG+ GT+
Sbjct: 122 NLHLEKNASLFFSEDKTDY--LPVVPQRYEGVEVYN--YSPLIYAANVTNVSITGK-GTL 176
Query: 155 DGQGAIW--WNMWRQRT----LPFTR--------------PNLIEFMNSRSIIISNVIFQ 194
+GQG W W + R +P +R PN + F S++I++ +
Sbjct: 177 EGQGQHWLEWGTVQPRANAAKVPLSRRKNFGKGAGKEGMRPNFVVFWKSKNILVEGITLN 236
Query: 195 NSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKS 254
SP WNIH VY N ++R +T+ + DS N DG+ DSS +V +E + + TGDD + +KS
Sbjct: 237 ESPMWNIHLVYSQNAIVRDITVNS-LDSQNGDGVVVDSSHDVLLEYNQLHTGDDAIVLKS 295
Query: 255 GWDEYGIAYGHPSSGITIRRV------TGSSPFSGIAVGSETSGGVENVLAEHINLYNVG 308
G++E G+A P+ + IR TGS G+ GSETSGG+ NV
Sbjct: 296 GFNEDGLAINIPTENVVIRNYYAYKVRTGS---GGVVFGSETSGGIRNVYVHDAVFEKCD 352
Query: 309 VGIHVKTNIGRGGFIRNITVSDVYMEN 335
GI KT GRG I NI V D+ M++
Sbjct: 353 RGIRFKTARGRGNVIENIFVRDISMKD 379
>gi|373462557|ref|ZP_09554274.1| hypothetical protein HMPREF9944_02538 [Prevotella maculosa OT 289]
gi|371948030|gb|EHO65924.1| hypothetical protein HMPREF9944_02538 [Prevotella maculosa OT 289]
Length = 853
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 126/419 (30%), Positives = 178/419 (42%), Gaps = 65/419 (15%)
Query: 36 NDKISITDFGG-VGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
N + IT FG N KA AI L + GG + VP G + TG+ L S +
Sbjct: 41 NRSVVITKFGAKTSASAAQNQKAILRAI---AVLAKQGGGKVIVPAGKWNTGALRLQSGI 97
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
L ++K A ++ D +PL+ Y I+ DVV++GE GTI
Sbjct: 98 ELVVSKDAHLQFVFDRDLYPLVKT-----SWEGMMCWNYSPCIYSYEANDVVVSGE-GTI 151
Query: 155 DGQGA--IWWNM----------------------------------WRQRTLPF---TRP 175
DG G+ WW M W +R RP
Sbjct: 152 DGGGSNETWWPMNGKANFGYVKGVTKEAQVLGSRARLQKMAEADMPWDERRFGKGYGLRP 211
Query: 176 NLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSN 235
LI F+ I IS V SPFW IHP+ C NV + V I + PN DG DP+ N
Sbjct: 212 QLINFVKGNRIRISGVTLLRSPFWVIHPLLCKNVTVDGVKIWN--EGPNGDGCDPEGCEN 269
Query: 236 VCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVE 295
V I+++ TGDD +A+KSG + G + PS I IR G+ +GSE SGG +
Sbjct: 270 VLIQNTLFHTGDDCIAIKSGRNNDGRFWNQPSKNIIIRNCVMEDGHGGVVIGSEISGGCQ 329
Query: 296 NVLAEHINLYNVGVG--IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDK 353
N+ AE + + + + +KTN RGG I NI + V + ++ + + ++ P +
Sbjct: 330 NIYAEDCEMDSPELDRVLRIKTNNCRGGLIENINMRRVKVGQCKEAV-VKINLDYEPKEP 388
Query: 354 FNPNALPVVNGITIKDVWGTKVQQSGLIQG-----------LKNSPFTGICLSNINLQG 401
PVV + ++DV K LI G LKN F GI N+ + G
Sbjct: 389 CYRGFEPVVRNVNVEDVTCQKSAYGVLIVGRDSVENVTDIRLKNCSFNGISKENVKITG 447
>gi|160936546|ref|ZP_02083913.1| hypothetical protein CLOBOL_01436 [Clostridium bolteae ATCC
BAA-613]
gi|158440337|gb|EDP18082.1| hypothetical protein CLOBOL_01436 [Clostridium bolteae ATCC
BAA-613]
Length = 522
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 149/311 (47%), Gaps = 21/311 (6%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+ + DFG GDG +T + AI R + +P G Y S L + + L
Sbjct: 82 LDVRDFGAKGDGIQDDTLFIQAAIMACPEKSR-----VLIPAGTYRIVSLFLKDDVNIEL 136
Query: 99 AKGAVIKATQDTWNWPLIAPL-PSYGRGRE--------RPGGRYMSFIHGDGLQDVVITG 149
A+GAV+ A D +P+ + SY E P + I+G ++ VI G
Sbjct: 137 AEGAVLSAYTDRTRFPVFQGMIQSYDEQGEYNLGTWEGNPLPMFTGIINGVNVKGAVIYG 196
Query: 150 ENGTIDGQ-GAIWWNMWRQRTLPFT--RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYC 206
+ GTIDG G N W + + T RP +I R + + + +NSP WNIHP +
Sbjct: 197 Q-GTIDGNAGDSEGNWWHEPKVIHTACRPRMIFLERCRQVTVQGITVRNSPSWNIHPYFS 255
Query: 207 SNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHP 266
++ + +L P DSPNTDG+DP+S +V I Y S GDD +AVKSG G Y P
Sbjct: 256 DHLRFFDLKVLNPKDSPNTDGLDPESCQDVEIAGVYFSLGDDCIAVKSGKIYMGSTYKRP 315
Query: 267 SSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNI 326
S I+IRR + +GSE +GGV+N+ + + G+ +KT GRG ++
Sbjct: 316 SKDISIRRCCMRDGHGSVTIGSEMAGGVKNLTVKDCMFLHTDRGLRIKTRRGRG---KDA 372
Query: 327 TVSDVYMENAR 337
V + E+ R
Sbjct: 373 VVDGIVFEHIR 383
>gi|29349531|ref|NP_813034.1| exo-poly-alpha-D-galacturonosidase [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341440|gb|AAO79228.1| exo-poly-alpha-D-galacturonosidase precursor [Bacteroides
thetaiotaomicron VPI-5482]
Length = 528
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 187/417 (44%), Gaps = 61/417 (14%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+++I DFG + DG TLNT+A AI + + GG + +P G++LTG L S++ LY
Sbjct: 58 EVNIRDFGALSDGVTLNTEAINNAI---KAVSSKGGGKVIIPEGLWLTGPVVLLSNVNLY 114
Query: 98 LAKGAVIKATQDTWNWPLI-------------APLPSY--------GRGRERPGGRYMSF 136
K A+I + DT +P+I +P+ + G G G
Sbjct: 115 AEKNALIVFSSDTSLYPIIDTSFEGLDTKRCQSPISAMNAENIAITGNGVFDGAGDRWRP 174
Query: 137 IHGDGL-----QDVVITGENGTIDGQGAIWW----------------NMWRQRT------ 169
+ D + +++V +G G +D G +W+ N ++ T
Sbjct: 175 VKKDKMTERQWKNLVSSG--GKVDENGKVWYPDAGALKASVLMTGQNNGQKEITDEEWTY 232
Query: 170 -LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGI 228
+ RP ++ + S+ I++ V F+NSP W IHP+ C ++ + V + P S N D +
Sbjct: 233 MKSWLRPVMLSIVKSKRILLEGVTFKNSPGWCIHPLSCESLTLNDVKVFNPWYSQNGDAL 292
Query: 229 DPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 288
D +S NV + + + GDD + +KSG DE G G P + I+ T G +GS
Sbjct: 293 DVESCKNVLVTNCFFDAGDDAICLKSGKDEDGRRRGEPCENVIIKNNTVLHGHGGFVIGS 352
Query: 289 ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM---ENARKGIKIAGD 345
E SGGV NV + VG+ K+ GRGG + NI + ++ M N + +
Sbjct: 353 EMSGGVRNVYVSGCSFVGTDVGLRFKSTRGRGGVVENIFIDNINMIDISNDALTMDLYYA 412
Query: 346 VGDHPDDKFNPNA---LPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL 399
V D P+ P+ PV I I +V +++ GL P I + N+ +
Sbjct: 413 VNDFPETPI-PDVNEETPVFRNIYISNVLCRGAERAVYFNGLPEMPLKNIFIKNMTV 468
>gi|212693553|ref|ZP_03301681.1| hypothetical protein BACDOR_03070 [Bacteroides dorei DSM 17855]
gi|212663806|gb|EEB24380.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 539
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 153/349 (43%), Gaps = 59/349 (16%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
++I DFG DG TLNTKA +AI Q + GG + +P G++LTG L S++ LY
Sbjct: 61 VNIIDFGAKPDGITLNTKAINDAI---QQVNAKGGGKVIIPEGLWLTGPIELLSNVNLYT 117
Query: 99 AKGAVIKATQDTWNWPLI-----------APLPSYGRGRERPGGRYMSFIHGDG------ 141
K +++ + D +P+I P R E G+G
Sbjct: 118 EKNSLVLFSADHSLYPIINTSFEGLETRRCQSPISARNAENIAITGHGVFDGNGDTWRPT 177
Query: 142 LQDVVITGE-------NGTIDGQGAIW----------------------------WNMWR 166
+D + G+ G +D G IW W+ R
Sbjct: 178 KKDKLTEGQWKKLIASGGVVDADGRIWYPSEGALKGAILSKDNFNVPRGELTDSDWDYMR 237
Query: 167 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 226
+ RP L+ F+ +++ F+NSP W +HP+ C N+ I VT+ P S N D
Sbjct: 238 D----WLRPVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYSQNGD 293
Query: 227 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 286
+D +S + I ++ GDD + +KSG DE G G P + + T G V
Sbjct: 294 ALDLESCNKALIINNSFDAGDDGICIKSGKDEQGRKRGEPCQNVIVMNNTVLHGHGGFVV 353
Query: 287 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 335
GSE SGGV N+ ++ VG+ K+N GRGG + NI +S++ M N
Sbjct: 354 GSEMSGGVNNIYVDNCTFMGTDVGLRFKSNRGRGGLVENIYISNINMIN 402
>gi|423294962|ref|ZP_17273089.1| hypothetical protein HMPREF1070_01754 [Bacteroides ovatus
CL03T12C18]
gi|392674542|gb|EIY67988.1| hypothetical protein HMPREF1070_01754 [Bacteroides ovatus
CL03T12C18]
Length = 529
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 100/340 (29%), Positives = 152/340 (44%), Gaps = 62/340 (18%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+++I FG GDG LNTKA +AI + + + GG + +P GV+LTG L S++ LY
Sbjct: 49 EVNIEKFGAKGDGLFLNTKAINDAI---KDVNQRGGGKVIIPEGVWLTGPIELLSNVNLY 105
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
+ A++ T D +P+IA S+ R R S I +++ ITG +GT DG
Sbjct: 106 TEQNALVLFTGDFEAYPIIAT--SFEGLETR---RCQSPISARNAENIAITG-HGTFDGN 159
Query: 158 GAIW---------WNMWRQ----------------------------------------- 167
G W + W++
Sbjct: 160 GDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLKGAMACKDFNVPEGINTDE 219
Query: 168 ---RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 224
P+ RP L+ + S+ +++ V F+NSP W +HP+ C + + + ++ P S N
Sbjct: 220 EWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQN 279
Query: 225 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 284
D ID +S N I +S GDD + +KSG DE G G P + ++ T G
Sbjct: 280 GDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGF 339
Query: 285 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 324
VGSE SGGV+N+ E VG+ K+ GRGG +
Sbjct: 340 VVGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 379
>gi|212694769|ref|ZP_03302897.1| hypothetical protein BACDOR_04302 [Bacteroides dorei DSM 17855]
gi|345516118|ref|ZP_08795611.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|423227933|ref|ZP_17214339.1| hypothetical protein HMPREF1063_00159 [Bacteroides dorei
CL02T00C15]
gi|423239066|ref|ZP_17220182.1| hypothetical protein HMPREF1065_00805 [Bacteroides dorei
CL03T12C01]
gi|423243193|ref|ZP_17224269.1| hypothetical protein HMPREF1064_00475 [Bacteroides dorei
CL02T12C06]
gi|212662623|gb|EEB23197.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|345455530|gb|EEO44191.2| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|392637680|gb|EIY31546.1| hypothetical protein HMPREF1063_00159 [Bacteroides dorei
CL02T00C15]
gi|392646068|gb|EIY39787.1| hypothetical protein HMPREF1064_00475 [Bacteroides dorei
CL02T12C06]
gi|392647477|gb|EIY41178.1| hypothetical protein HMPREF1065_00805 [Bacteroides dorei
CL03T12C01]
Length = 465
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 118/396 (29%), Positives = 184/396 (46%), Gaps = 55/396 (13%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYL-TGSFNLTSHMTL 96
+IS+ FG GDGK AF +A+ R H+ GG + VP G YL G + S++ L
Sbjct: 50 QISLISFGAKGDGKKDCKPAFDKAMKRAAHM---GGAHIVVPAGEYLLNGPIHFVSNVCL 106
Query: 97 YLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDG 156
L +GA +K + + + + G + Y FI+G L++V I G+ G IDG
Sbjct: 107 ELQEGATLKFSSEPAFYLPLVKTSWEGTFLQN----YSPFIYGYQLENVSIIGK-GVIDG 161
Query: 157 QGAIWWNMWR--------------QRTLP----------FTRPNLIEFMNSRSIIISNVI 192
+ W+ + +P + RP+L++F + ++I I +V
Sbjct: 162 NAGTTFATWKSKQKIGQQLSREMNHKEVPVAERNFGEGYWLRPHLVQFFDCKNITIEDVF 221
Query: 193 FQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAV 252
N+PFW IH + N++ R I A N DGIDP+ + N+ IE+ + GDD VA+
Sbjct: 222 ITNAPFWCIHLLKSENIICR--GIRYDAKLVNNDGIDPEYTRNLLIENIEFNNGDDNVAI 279
Query: 253 KSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYN-VGVGI 311
K G D G PS I IR G+ +GSE S G+++V E+ GI
Sbjct: 280 KCGRDNDGWKTSCPSENIIIRNCKFKG-LHGVVLGSEMSSGIQHVFVENCTYGGYCKRGI 338
Query: 312 HVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGD-------HPDDKFNPNALPVVNG 364
+KTN RGGFIR D+Y+ N G+V D + + + + V+
Sbjct: 339 FIKTNPDRGGFIR-----DIYVNNCE-----FGEVEDLFYVTSMYAGEGMDNHHFTEVHD 388
Query: 365 ITIKDVWGTKVQQSGLI-QGLKNSPFTGICLSNINL 399
I +KD+ KV + L+ QG + P + N+++
Sbjct: 389 IYVKDLKCKKVNVAALVLQGTEAKPIYNVTFDNVDV 424
>gi|408789181|ref|ZP_11200887.1| polygalacturonase-like protein [Rhizobium lupini HPC(L)]
gi|408485004|gb|EKJ93352.1| polygalacturonase-like protein [Rhizobium lupini HPC(L)]
Length = 519
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 161/347 (46%), Gaps = 21/347 (6%)
Query: 72 GGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRG----RE 127
GGTL + G + + L S MT +LA+GAV++A WP++ G
Sbjct: 122 GGTL-QLAAGFWTSFPIRLKSSMTFHLAEGAVLRAPASRKGWPILPACDDAGHMLGSWEG 180
Query: 128 RPGGRYMSFIHGDGLQDVVITGENGTIDGQG--AIWWNMWRQRTLPFTRPNLIEFMNSRS 185
P + + +H G +++I G G +DG G WW+ ++ RP + ++ R
Sbjct: 181 LPDACFAAPVHAIGTDNLIIEG-RGVLDGSGDRGDWWSWPKETRDGARRPRGLHLVSCRK 239
Query: 186 IIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYIST 245
I + +N+ W IHP C +++ +TI AP DSPNTDG +P+S NV I S
Sbjct: 240 IQLLGFTIKNAASWTIHPQGCEDLIAAGLTINAPHDSPNTDGFNPESCRNVTISGVRFSV 299
Query: 246 GDDLVAVKSGWDEYGIAYGH--PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHIN 303
GDD +AVK+G H + GI +R G+ +GSE SGGV +V E +
Sbjct: 300 GDDCIAVKAGKRSPDGEDDHLAETRGIRVRHCLMERGHGGLVIGSEMSGGVHDVSVEDCD 359
Query: 304 LYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV---GDHPDDKFNP---- 356
+ G+ +KT GRGG + NI + V ++ + + D D++
Sbjct: 360 MVGTDRGLRLKTRRGRGGIVSNIAMRRVLLDGVQTALSANAHYHCDADGHDERVQSRQPA 419
Query: 357 ---NALPVVNGITIKDVWGTKV-QQSGLIQGLKNSPFTGICLSNINL 399
P ++GI ++DV + +G+ GL +P + + N+ +
Sbjct: 420 PIDKGTPFIDGIIVEDVEIRNLAHAAGVFLGLPEAPIRNVAIRNLTI 466
>gi|330836022|ref|YP_004410663.1| Polygalacturonase [Sphaerochaeta coccoides DSM 17374]
gi|329747925|gb|AEC01281.1| Polygalacturonase [Sphaerochaeta coccoides DSM 17374]
Length = 459
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 113/368 (30%), Positives = 160/368 (43%), Gaps = 48/368 (13%)
Query: 70 RSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERP 129
R GG +L +P G + TG L S +T LA+G+ + D L P+ S G
Sbjct: 32 RHGGEVL-IPSGTWHTGPVTLASGITFRLAEGSRLVFIPDE---DLYVPVYSRWEGVSCW 87
Query: 130 GGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQ---------------------- 167
FI DV +TG G IDG G WW R+
Sbjct: 88 CMHPCLFISES--HDVTVTG-TGVIDGSGKSWWESARRKRALHMKPETPMEKKLAALNPG 144
Query: 168 ----------RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL 217
R F RP L++ ++S + + V SPFW +HPV+ S + R V I+
Sbjct: 145 YADQPGGGGGRQCQFLRPPLLQILDSTRVTVEGVTLTGSPFWTLHPVFSSGLTFRDVKII 204
Query: 218 APADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTG 277
PAD+PNTDGID DS +V + + GDD +A+KSG GIA G P+ + + T
Sbjct: 205 NPADAPNTDGIDIDSCQDVMVTGCLVDVGDDGIALKSGSGPDGIAAGRPTRNVRVSGCTV 264
Query: 278 SSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-- 335
S GI +GSET+ G+ ++AE GI +KT GRGG I ++ + M N
Sbjct: 265 RSAHGGIVIGSETAAGISGLVAEDCLFDGTDRGIRIKTRRGRGGAISDLRFERLTMRNNL 324
Query: 336 ARKGIKIAGDVGDHPDDKFN------PNALPVVNGITIKDVWGTKVQQS-GLIQGLKNSP 388
I + G F+ + P + I ++D T Q S G I GL P
Sbjct: 325 CPLAINMYYRCGTTEGSLFSLSPEPIDDTTPSIGNILVRDCVATGSQASAGFIVGLPERP 384
Query: 389 FTGICLSN 396
T + + +
Sbjct: 385 ITELVVED 392
>gi|299148526|ref|ZP_07041588.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|298513287|gb|EFI37174.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
Length = 539
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 100/340 (29%), Positives = 152/340 (44%), Gaps = 62/340 (18%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+++I FG GDG LNTKA +AI + + + GG + +P GV+LTG L S++ LY
Sbjct: 59 EVNIEKFGAKGDGLFLNTKAINDAI---KDVNQRGGGKVIIPEGVWLTGPIELLSNVNLY 115
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
+ A++ T D +P+IA S+ R R S I +++ ITG +GT DG
Sbjct: 116 TEQNALVLFTGDFEAYPIIAT--SFEGLETR---RCQSPISARNAENIAITG-HGTFDGN 169
Query: 158 GAIW---------WNMWRQ----------------------------------------- 167
G W + W++
Sbjct: 170 GDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLRGAMACKDFNVPEGINTDE 229
Query: 168 ---RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 224
P+ RP L+ + S+ +++ V F+NSP W +HP+ C + + + ++ P S N
Sbjct: 230 EWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQN 289
Query: 225 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 284
D ID +S N I +S GDD + +KSG DE G G P + ++ T G
Sbjct: 290 GDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGF 349
Query: 285 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 324
VGSE SGGV+N+ E VG+ K+ GRGG +
Sbjct: 350 VVGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|410634542|ref|ZP_11345177.1| exo-poly-alpha-D-galacturonosidase [Glaciecola arctica BSs20135]
gi|410145928|dbj|GAC22044.1| exo-poly-alpha-D-galacturonosidase [Glaciecola arctica BSs20135]
Length = 477
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 201/419 (47%), Gaps = 65/419 (15%)
Query: 29 IVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSF 88
I+ + + +SIT+ G + +++A R+ I ++ +GG + VP G + TG
Sbjct: 50 IIAPSFPDYAMSITELGAKPGFENDSSEAIRQTIAKVVS---AGGGTVVVPAGEFYTGPV 106
Query: 89 NLTSHMTLYLAKGAVIKATQDTWNW-PLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVI 147
+L S++ ++AKGAV+ + + P + + G E G I+ +V I
Sbjct: 107 HLESNINFHIAKGAVLHFYPEPERYKPYVF---TRWEGTELMG--LSPLIYAYKKTNVAI 161
Query: 148 TGENGTIDGQGAI--WW---NMWRQRT-----------------------LP-------- 171
TG+ G ++G G+ WW W++ T LP
Sbjct: 162 TGK-GILEGGGSEQHWWPWKGPWKKSTWGDDPIENQKFTRDVLREMAEQELPVAQRVFKN 220
Query: 172 -FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 230
+ RP I+ +++I V +NSPFW ++PV C NV +R I + PN+DG DP
Sbjct: 221 NYLRPPFIQPYACINVLIEGVTIKNSPFWLVNPVLCKNVTVR--NIHCDSHGPNSDGCDP 278
Query: 231 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 290
++ ++V IE+ TGDD +A+KSG + G G P I I S G+ +GSE
Sbjct: 279 EACTDVLIENCIFDTGDDCIAIKSGRNADGRRVGQPCENILINNCQMRSGHGGVVIGSEI 338
Query: 291 SGGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-----A 343
SGGV N+ A++ + ++ GI +KTN RGG ++N+ D+ + ++ + I
Sbjct: 339 SGGVRNLYAQNCEMSSPDLDRGIRIKTNSIRGGHLKNLNYRDIRIGQVKEAVVINFYYEE 398
Query: 344 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 402
GDVG KF PV+ I I++++ ++ ++G ++P TG+ + N+ + V
Sbjct: 399 GDVG-----KFT----PVLEDINIENLYVEHATRAFSLRGYPHTPITGVSIKNLTILKV 448
>gi|50120129|ref|YP_049296.1| polygalacturonase [Pectobacterium atrosepticum SCRI1043]
gi|49610655|emb|CAG74100.1| putative polygalacturonase [Pectobacterium atrosepticum SCRI1043]
Length = 460
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 124/441 (28%), Positives = 200/441 (45%), Gaps = 52/441 (11%)
Query: 2 FRFLVTLSILLSYFNCFSLA-SVVTCSGIVPMRYRNDKISITDFGGVGDGK--TLNTKAF 58
R + LS++ S C +L T +++ + +T +G G LNT+AF
Sbjct: 1 MRSGLALSLMAS---CITLGIQAGTAQAASSVKFPDKTCDVTQYGAEGHRLQIALNTEAF 57
Query: 59 REAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAP 118
++AI +GG ++VP G YL L S++ L LAK A I A+ + +
Sbjct: 58 QKAI---DDCAAAGGGTVHVPRGNYLVDPLFLKSNIRLDLAKDATIVASTEVAAYRATEK 114
Query: 119 LPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPF------ 172
+ E G ++ FI Q+V ITG+ GTIDGQGA+WW WR+
Sbjct: 115 T----KYAEAENG-WLPFISIADAQNVAITGQ-GTIDGQGAVWWERWRENIRATGKKGGT 168
Query: 173 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDS 232
RP LI +S ++++ V +SP +++ Y +V + IL+P +PNTD IDP
Sbjct: 169 DRPRLIYIKSSSNVLVDGVTLTHSPSFHVVMRYSHDVDVNGTRILSPWHAPNTDAIDPID 228
Query: 233 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSG 292
S N+ I ++YI DD +A+K+ + G + + GI++GSETSG
Sbjct: 229 SQNIRITNNYIDCNDDHIAIKAEKPDSRFPNGVVDNIYIANNILKQG--RGISIGSETSG 286
Query: 293 GVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG-------- 344
GV NVL E+ GI +KT G+GG ++NIT + M + + A
Sbjct: 287 GVNNVLVENNQFEGSMYGIRIKTLRGKGGEVKNITYRNTKMVDVEIPLVFAAYYKAAPIV 346
Query: 345 -------------DVGDH-------PDDKFNPNALPVVNGITIKDVWGT-KVQQSGLIQG 383
+G+ P+ F+ P + +TI+++ T K + + I G
Sbjct: 347 QAEVDKMLAEGGFTMGEQIYPPDTDPEQPFDQYKTPHFSNVTIENLESTGKTKAAAYIIG 406
Query: 384 LKNSPFTGICLSNINLQGVAG 404
+ +P +G N+ + G
Sbjct: 407 VPEAPLSGFHFDNVRIDADKG 427
>gi|419957067|ref|ZP_14473133.1| glycoside hydrolase family protein [Enterobacter cloacae subsp.
cloacae GS1]
gi|388607225|gb|EIM36429.1| glycoside hydrolase family protein [Enterobacter cloacae subsp.
cloacae GS1]
Length = 430
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 126/402 (31%), Positives = 182/402 (45%), Gaps = 56/402 (13%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
ISI G + L+T A ++AI Q ++ +P G +LTG+ L S ++L L
Sbjct: 4 ISILACGADPTAQRLSTSAIQQAINSAQE-----NDVIVIPQGRFLTGALFLKSGVSLRL 58
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
GA + +QD ++PLI + G P G I+ ++V ITG GTIDGQG
Sbjct: 59 DAGAQLVGSQDLADYPLINTRVA-GIDMRWPAG----IINIIDCENVSITG-TGTIDGQG 112
Query: 159 AIWWNM-------------WRQRTLPFT------RPNLIEFMNSRSIIISNVIFQNSPFW 199
IWW + R L + RP I S++I++ + + S FW
Sbjct: 113 VIWWQRFWGDDERSGMVGDYSARGLRWVVDYDCQRPRNILVFESQNILLRDFTSRESGFW 172
Query: 200 NIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEY 259
NIH Y + + V I A P+TDGID DS V IE +S DD + +KSG
Sbjct: 173 NIHLCYSRRIAVEAVQISNSA-GPSTDGIDVDSCEQVRIERCIVSCNDDNICIKSGRGRE 231
Query: 260 GIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 319
+ I IR T + SGI +GSETSGG+E VL E GVG +K+ R
Sbjct: 232 AAQKARTARDIVIRGCTLNKG-SGITLGSETSGGIERVLIEDNAFNGTGVGFRIKSARNR 290
Query: 320 GGFIRNITVSDVYMENARKGIKIAGD------VGDHPDDKFNPN-------------ALP 360
GGFIR+ITV ++ + + R + I + GD + P L
Sbjct: 291 GGFIRDITVQNLRLTDVRFPVLIQLNWFPQYSYGDQSNLSDKPEHWRKLAEGVEGEAGLT 350
Query: 361 VVNGITIKDVWGTK-----VQQSGLIQGLKNSPFTGICLSNI 397
V+G+TIK++ + ++ I+G P G+ L I
Sbjct: 351 EVSGLTIKNMTARRSDKKYFSRAFFIEGYPERPVAGLTLEGI 392
>gi|224536236|ref|ZP_03676775.1| hypothetical protein BACCELL_01103 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522122|gb|EEF91227.1| hypothetical protein BACCELL_01103 [Bacteroides cellulosilyticus
DSM 14838]
Length = 456
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 118/405 (29%), Positives = 192/405 (47%), Gaps = 55/405 (13%)
Query: 29 IVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLT-GS 87
IVP + + +T +G D + A EAI +GG + +P G Y + G+
Sbjct: 41 IVPPTFPDSIYDVTAYGAKSDTSFDSRPAILEAI---NQCNTNGGGTVLIPAGNYFSKGA 97
Query: 88 FNLTSHMTLYLAKGAVIKATQDTWNW-PLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVV 146
L S++ L++A GA ++ + ++ P++ + G E Y FI+ +V
Sbjct: 98 ILLKSNVNLHIADGARLEFSTVASDYLPMVL---TKWEGTE--CFNYSPFIYAYQCTNVA 152
Query: 147 ITGENGTIDGQGAIWWNMWRQRTLP------------------------FTRPNLIEFMN 182
+TG+ GTIDG GA+ +N W P + RP +I+F
Sbjct: 153 LTGK-GTIDGNGAVTFNGWHALQGPALDRLRQMGIDSIPVYERVFGEGYYLRPCMIQFYG 211
Query: 183 SRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSY 242
+++++ +V +SPFW IHPV+C NV +R V I +++ N DG DP+SS+NV IE+
Sbjct: 212 CKNVLVEDVQIYDSPFWIIHPVFCDNVTVRNVYI--DSNNYNNDGCDPESSTNVLIENMD 269
Query: 243 ISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHI 302
+ GDD +A+KSG D+ G G + + IR + I +GSE SGGV N+ E
Sbjct: 270 FNVGDDGIAIKSGRDQDGWRIGQATENVIIRNCHFAR--WAITIGSEMSGGVRNIFIEDC 327
Query: 303 NLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG-IKIAGDV-----GDHPDDKFNP 356
+ + GI+ K+N+ RGG+ N+ + + + G I + G+HP
Sbjct: 328 KIDSCRNGIYFKSNLDRGGYFENLNMRRIEADVCLWGVINFRTNYHGYRGGNHP------ 381
Query: 357 NALPVVNGITIKDVWGTKVQQSGLI-QGLKNSPFTGICLSNINLQ 400
+ I I+DV +V L+ GL + I L NI ++
Sbjct: 382 ---TLFRNICIEDVTCNRVDSVALMANGLPEAKLYNITLRNIKVK 423
>gi|237710960|ref|ZP_04541441.1| glycoside hydrolase [Bacteroides sp. 9_1_42FAA]
gi|265750548|ref|ZP_06086611.1| glycoside hydrolase, family 28 [Bacteroides sp. 3_1_33FAA]
gi|229454804|gb|EEO60525.1| glycoside hydrolase [Bacteroides sp. 9_1_42FAA]
gi|263237444|gb|EEZ22894.1| glycoside hydrolase, family 28 [Bacteroides sp. 3_1_33FAA]
Length = 443
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 118/396 (29%), Positives = 184/396 (46%), Gaps = 55/396 (13%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYL-TGSFNLTSHMTL 96
+IS+ FG GDGK AF +A+ R H+ GG + VP G YL G + S++ L
Sbjct: 28 QISLISFGAKGDGKKDCKPAFDKAMKRAAHM---GGAHIVVPAGEYLLNGPIHFVSNVCL 84
Query: 97 YLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDG 156
L +GA +K + + + + G + Y FI+G L++V I G+ G IDG
Sbjct: 85 ELQEGATLKFSSEPAFYLPLVKTSWEGTFLQN----YSPFIYGYQLENVSIIGK-GVIDG 139
Query: 157 QGAIWWNMWR--------------QRTLP----------FTRPNLIEFMNSRSIIISNVI 192
+ W+ + +P + RP+L++F + ++I I +V
Sbjct: 140 NAGTTFATWKSKQKIGQQLSREMNHKEVPVAERNFGEGYWLRPHLVQFFDCKNITIEDVF 199
Query: 193 FQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAV 252
N+PFW IH + N++ R I A N DGIDP+ + N+ IE+ + GDD VA+
Sbjct: 200 ITNAPFWCIHLLKSENIICR--GIRYDAKLVNNDGIDPEYTRNLLIENIEFNNGDDNVAI 257
Query: 253 KSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYN-VGVGI 311
K G D G PS I IR G+ +GSE S G+++V E+ GI
Sbjct: 258 KCGRDNDGWKTSCPSENIIIRNCKFKG-LHGVVLGSEMSSGIQHVFVENCTYGGYCKRGI 316
Query: 312 HVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGD-------HPDDKFNPNALPVVNG 364
+KTN RGGFIR D+Y+ N G+V D + + + + V+
Sbjct: 317 FIKTNPDRGGFIR-----DIYVNNCE-----FGEVEDLFYVTSMYAGEGMDNHHFTEVHD 366
Query: 365 ITIKDVWGTKVQQSGLI-QGLKNSPFTGICLSNINL 399
I +KD+ KV + L+ QG + P + N+++
Sbjct: 367 IYVKDLKCKKVNVAALVLQGTEAKPIYNVTFDNVDV 402
>gi|237721299|ref|ZP_04551780.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
gi|229449095|gb|EEO54886.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
Length = 539
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 152/340 (44%), Gaps = 62/340 (18%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+++I FG GDG LNTKA +AI + + + GG + +P G++LTG L S++ LY
Sbjct: 59 EVNIEKFGAKGDGLFLNTKAINDAI---KDVNQHGGGKVIIPEGIWLTGPIELLSNVNLY 115
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
+ A++ T D +P+IA S+ R R S I +++ ITG +GT DG
Sbjct: 116 TKQNALVLFTGDFEAYPIIAT--SFEGLETR---RCQSPISARNAENIAITG-HGTFDGN 169
Query: 158 GAIW---------WNMWRQ----------------------------------------- 167
G W + W++
Sbjct: 170 GDCWRPVKKGKLTASQWKKLVKSGGVLDEKQEVWYPTAGSLKGAMACKDFNVPEGINTDE 229
Query: 168 ---RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 224
P+ RP L+ + S+ +++ V F+NSP W +HP+ C + + + ++ P S N
Sbjct: 230 EWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQN 289
Query: 225 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 284
D ID +S N I +S GDD + +KSG DE G G P + ++ T G
Sbjct: 290 GDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGF 349
Query: 285 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 324
VGSE SGGV+N+ E VG+ K+ GRGG +
Sbjct: 350 VVGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|371776320|ref|ZP_09482642.1| glycoside hydrolase family protein [Anaerophaga sp. HS1]
Length = 463
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 121/410 (29%), Positives = 185/410 (45%), Gaps = 47/410 (11%)
Query: 30 VPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFN 89
VP D SITDFG V K TKA +AI +GG + +P G + +G +
Sbjct: 51 VPEFSECDDFSITDFGAVEKEKISTTKAISQAIAAASD---AGGGRVIIPAGEWFSGKIH 107
Query: 90 LTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITG 149
L S++ L+L++GA++ + D ++ + + + G E Y I+ ++V ITG
Sbjct: 108 LKSNVNLHLSEGAILTFSGDPQDY--LPAVHTTWEGIE--CYNYSPLIYAYKCENVAITG 163
Query: 150 ENGTIDGQGAIWWNMW------------------------RQRTL----PFTRPNLIEFM 181
G + + +W W ++R + RP I+F
Sbjct: 164 A-GQLKAEMGVW-KRWFARPPAHMNSLKKLYHMAAKGVAVQERVMVNDTSHLRPQFIQFN 221
Query: 182 NSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDS 241
+++ + V NSPFW IHP C NVVIR V + A N DG+DP+ NV IED
Sbjct: 222 RCKNVRMEGVTIINSPFWVIHPYMCHNVVIRNVKVYAHGH--NNDGVDPEMCENVLIEDC 279
Query: 242 YISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEH 301
GDD +A+KSG ++ PS I +R + +A+GSE SGGVENV E+
Sbjct: 280 VFDQGDDAIAIKSGRNQDAWRLNTPSRNIVVRNCLVKNGHQLLAIGSELSGGVENVFLEN 339
Query: 302 INLYNVGVGIH---VKTNIGRGGFIRNITVSDVYMENARKGIK-IAGDVGDHPDD---KF 354
+ H +KTN RGG+++N+ V +V + +GI I DV D +
Sbjct: 340 CTVEENARMFHLVFIKTNERRGGYVKNVYVRNVTADKMSQGILGIDTDVLYQWRDLVPTY 399
Query: 355 NPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 404
P ++ + + D+ KV I P I L NI ++ + G
Sbjct: 400 EKRLTP-ISDVYLTDIKANKVNFLSRILAQDALPVKNIRLKNIRVEQITG 448
>gi|336414787|ref|ZP_08595131.1| hypothetical protein HMPREF1017_02239 [Bacteroides ovatus
3_8_47FAA]
gi|335942157|gb|EGN04005.1| hypothetical protein HMPREF1017_02239 [Bacteroides ovatus
3_8_47FAA]
Length = 529
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 152/340 (44%), Gaps = 62/340 (18%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+++I FG GDG LNTKA +AI + + + GG + +P G++LTG L S++ LY
Sbjct: 49 EVNIEKFGAKGDGLFLNTKAINDAI---KDVNQHGGGKVIIPEGIWLTGPIELLSNVNLY 105
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
+ A++ T D +P+IA S+ R R S I +++ ITG +GT DG
Sbjct: 106 TEQNALVLFTGDFEAYPIIAT--SFEGLETR---RCQSPISARNAENIAITG-HGTFDGN 159
Query: 158 GAIW---------WNMWRQ----------------------------------------- 167
G W + W++
Sbjct: 160 GDCWRPVKKGKLTASQWKKLVKSGGVLDEKQEVWYPTAGSLKGAMACKDFNVPEGINTDE 219
Query: 168 ---RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 224
P+ RP L+ + S+ +++ V F+NSP W +HP+ C + + + ++ P S N
Sbjct: 220 EWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQN 279
Query: 225 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 284
D ID +S N I +S GDD + +KSG DE G G P + ++ T G
Sbjct: 280 GDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGF 339
Query: 285 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 324
VGSE SGGV+N+ E VG+ K+ GRGG +
Sbjct: 340 VVGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 379
>gi|227329691|ref|ZP_03833715.1| putative polygalacturonase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 460
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 124/441 (28%), Positives = 200/441 (45%), Gaps = 52/441 (11%)
Query: 2 FRFLVTLSILLSYFNCFSLA-SVVTCSGIVPMRYRNDKISITDFGGVGD--GKTLNTKAF 58
R + LS++ S C +L T +++ + +T +G G LNT+AF
Sbjct: 1 MRSGLALSLMAS---CITLGIQAGTAQAASSVKFPDKICDVTQYGAEGHRLQIALNTQAF 57
Query: 59 REAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAP 118
++AI +GG ++VP G YL L S++ L LAK A I A+ + +
Sbjct: 58 QKAI---DDCAAAGGGTVHVPRGNYLVDPLFLKSNIRLDLAKDATIVASTEEAAYRATEK 114
Query: 119 LPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPF------ 172
+ E G ++ FI Q+V ITG+ GTIDGQGA+WW WR+
Sbjct: 115 T----KYAEAENG-WLPFISIADAQNVAITGQ-GTIDGQGAVWWERWRENIRATGKKGGT 168
Query: 173 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDS 232
RP LI +S ++++ V +SP +++ Y +V + IL+P +PNTD IDP
Sbjct: 169 DRPRLIYIKSSNNVLVDGVTLTHSPSFHVVMRYSHDVDVNGTRILSPWHAPNTDAIDPID 228
Query: 233 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSG 292
S N+ I ++YI DD +A+K+ + G + + GI++GSETSG
Sbjct: 229 SQNIRITNNYIDCNDDHIAIKAEKPDSRFPNGVVDNIYIANNILKQG--RGISIGSETSG 286
Query: 293 GVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG-------- 344
GV NVL E+ GI +KT G+GG ++NIT + M + + A
Sbjct: 287 GVNNVLVENNQFEGSMYGIRIKTLRGKGGEVKNITYRNTKMVDVEIPLVFAAYYKAAPIV 346
Query: 345 -------------DVGDH-------PDDKFNPNALPVVNGITIKDVWGT-KVQQSGLIQG 383
+G+ P+ F+ P + +TI+++ T K + + I G
Sbjct: 347 QAEVDKMLAEGGFTMGEQIYPPDTDPEQPFDQYKTPHFSNVTIENLESTGKTKAAAYIIG 406
Query: 384 LKNSPFTGICLSNINLQGVAG 404
+ +P +G N+ + G
Sbjct: 407 VPEAPLSGFHFDNVRIDADKG 427
>gi|423212244|ref|ZP_17198773.1| hypothetical protein HMPREF1074_00305 [Bacteroides xylanisolvens
CL03T12C04]
gi|392695132|gb|EIY88357.1| hypothetical protein HMPREF1074_00305 [Bacteroides xylanisolvens
CL03T12C04]
Length = 539
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 151/340 (44%), Gaps = 62/340 (18%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+++I FG GDG LNTKA +AI + R GG ++ +P G++LTG L S++ LY
Sbjct: 59 EVNIEKFGAKGDGLFLNTKAINDAIKEVNQ--RGGGKVI-IPEGIWLTGPIELLSNVNLY 115
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
+ A++ T D +P+IA S+ R R S I +++ ITG GT DG
Sbjct: 116 TEQNALVLFTGDFEAYPIIAT--SFEGLETR---RCQSPISARNAENIAITG-YGTFDGN 169
Query: 158 GAIW---------WNMWRQ----------------------------------------- 167
G W + W++
Sbjct: 170 GDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLKGAMACKDFNVPEGINTDE 229
Query: 168 ---RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 224
P+ RP L+ + S+ +++ V F+NSP W +HP+ C + + V ++ P S N
Sbjct: 230 EWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNVMVINPWYSQN 289
Query: 225 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 284
D ID +S N I +S GDD + +KSG DE G G P + ++ T G
Sbjct: 290 GDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGF 349
Query: 285 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 324
VGSE SGGV+N+ E VG+ K+ GRGG +
Sbjct: 350 VVGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|322434842|ref|YP_004217054.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321162569|gb|ADW68274.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 478
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 103/314 (32%), Positives = 164/314 (52%), Gaps = 27/314 (8%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+ + DFG GDG T++T A ++AI +S GT+++ P G YL+GS + S +TL L
Sbjct: 27 VKVNDFGAKGDGSTMDTAAIQKAI---DAAAKSHGTVVFAP-GTYLSGSIFVKSGVTLQL 82
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
KG I +Q ++P+ +P+ G E + ++ +D VITGE GTIDG G
Sbjct: 83 DKGVTILGSQRIEDYPV---MPTRVAGIEMSWPAALVNVYEQ--KDAVITGE-GTIDGDG 136
Query: 159 AIWWN-MWRQRT------------LPFTRPNLIEFMNSRSIIISN-VIFQNSPFWNIHPV 204
I+W+ W R RP L++ NS I I ++ + S FW +H
Sbjct: 137 KIYWDSYWTLRKGYEPRGLRWASDYDARRPRLVQVFNSSHIKIGGGLLLRRSGFWTLHIC 196
Query: 205 YCSNVVIRYVTIL--APADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA 262
Y ++V +TI P+TDGID DSS ++ + + I+ DD + +K+G D G+
Sbjct: 197 YSTDVTADGLTIRNNEGGRGPSTDGIDIDSSKHIVVAHADIAVNDDALCLKAGRDSDGLR 256
Query: 263 YGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLY-NVGVGIHVKTNIGRGG 321
P+ + +R T +G+ GSETSGG N+ A ++ ++ +V VGI K+ RGG
Sbjct: 257 VNRPTEDVVLRDSTIRDGAAGVTFGSETSGGFRNIEAYNLKVFGHVPVGILFKSAHTRGG 316
Query: 322 FIRNITVSDVYMEN 335
F N+ + D+ + +
Sbjct: 317 FAENVRIHDLTLTD 330
>gi|423226065|ref|ZP_17212531.1| hypothetical protein HMPREF1062_04717 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392630583|gb|EIY24571.1| hypothetical protein HMPREF1062_04717 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 466
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 118/405 (29%), Positives = 192/405 (47%), Gaps = 55/405 (13%)
Query: 29 IVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLT-GS 87
IVP + + +T +G D + A EAI +GG + +P G Y + G+
Sbjct: 51 IVPPTFPDSIYDVTAYGAKSDTSFDSRPAILEAI---NQCNTNGGGTVLIPAGNYFSKGT 107
Query: 88 FNLTSHMTLYLAKGAVIKATQDTWNW-PLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVV 146
L S++ L++A GA ++ + ++ P++ + G E Y FI+ +V
Sbjct: 108 ILLKSNVNLHVADGARLEFSTVASDYLPMVL---TKWEGTE--CFNYSPFIYAYQCTNVA 162
Query: 147 ITGENGTIDGQGAIWWNMWRQRTLP------------------------FTRPNLIEFMN 182
+TG+ GTIDG GA+ +N W P + RP +I+F
Sbjct: 163 LTGK-GTIDGNGAVTFNGWHALQGPALDRLRQMGIDSIPVYERVFGEGYYLRPCMIQFYG 221
Query: 183 SRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSY 242
+++++ +V +SPFW IHPV+C NV +R V I +++ N DG DP+SS+NV IE+
Sbjct: 222 CKNVLVEDVQIYDSPFWIIHPVFCDNVTVRNVYI--DSNNYNNDGCDPESSTNVLIENMD 279
Query: 243 ISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHI 302
+ GDD +A+KSG D+ G G + + IR + I +GSE SGGV N+ E
Sbjct: 280 FNVGDDGIAIKSGRDQDGWRIGQATENVIIRNCHFAR--WAITIGSEMSGGVRNIFIEDC 337
Query: 303 NLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG-IKIAGDV-----GDHPDDKFNP 356
+ + GI+ K+N+ RGG+ N+ + + + G I + G+HP
Sbjct: 338 KIDSCRNGIYFKSNLDRGGYFENLNMRRIEADVCLWGVINFRTNYHGYRGGNHP------ 391
Query: 357 NALPVVNGITIKDVWGTKVQQSGLI-QGLKNSPFTGICLSNINLQ 400
+ I I+DV +V L+ GL + I L NI ++
Sbjct: 392 ---TLFRNICIEDVTCNRVDSVALMANGLPEAKLYNITLRNIKVK 433
>gi|399029277|ref|ZP_10730250.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398072887|gb|EJL64081.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 563
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 162/353 (45%), Gaps = 59/353 (16%)
Query: 33 RYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTS 92
+++ D ++I DFG V + L TKA +AI + SGG ++ +P G++ TG L S
Sbjct: 53 KFKKDTLNIVDFGAVPNTGELCTKAINDAIMKCSE---SGGGVVAIPSGLWTTGPIYLKS 109
Query: 93 HMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENG 152
++ L+ GA I T D + LI SY G + R S I G GL+++ ITG+ G
Sbjct: 110 NVNLHTQNGAYILFTSDLNQYKLIN---SYFEGNKVI--RCESPIMGVGLENIAITGK-G 163
Query: 153 TIDGQGAIW------------W-NM-------------W-----------RQRTLPFT-- 173
DG G+ W W NM W ++ LP
Sbjct: 164 IFDGNGSKWRPVKIGKMSDEQWKNMVNSGGILSKDRKTWYPSEEALIGNEQKDKLPKVPS 223
Query: 174 -----------RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS 222
RP ++ +N + +++ V FQNSP WN++P+ C NV + + I P S
Sbjct: 224 IENMKPYKQALRPVMVSLVNCKKLLLDGVTFQNSPAWNVNPLMCENVTLSNLNIRNPWYS 283
Query: 223 PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS 282
N DG+D +S + + GDD + +KSG D+ G G P+ I+
Sbjct: 284 QNGDGLDLESCRIGTVTNCRFDVGDDAICIKSGKDQEGRERGKPTELFVIKDCVVYHGHG 343
Query: 283 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 335
G +GSE SGGV N+ +++ G+ K+ GRGG + NI + D+ M +
Sbjct: 344 GFVIGSEMSGGVRNLFIKNLTFIGTDCGLRFKSTRGRGGLVENIWMEDIRMSD 396
>gi|116619804|ref|YP_821960.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116222966|gb|ABJ81675.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 535
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 130/452 (28%), Positives = 200/452 (44%), Gaps = 74/452 (16%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
+I D+G DG T AFR+AI Q + +GG +YVPPG Y +G L S+MTL +
Sbjct: 32 NIADYGAKKDGSAPATDAFRQAI---QAAKAAGGGTIYVPPGRYTSGPIELFSNMTLDID 88
Query: 100 KGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRY--MSFIHGDGLQDVVITGE------- 150
GA ++ +P +A LP + RGR M I G G+++V +TG
Sbjct: 89 AGARVE-------FP-VAELP-FTRGRYLGVETLTPMPLIGGTGVENVTVTGRGILTTGD 139
Query: 151 -------------------NGTID--------GQGAIWWNMWR-------------QRTL 170
NG I G W ++ + +
Sbjct: 140 YEAWRKAYPAAYQEYLKLHNGVISTGGSEAFSANGPRWDHLLKVLETGHRASEEEYRLAA 199
Query: 171 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 230
RP+ I FMN++++++ +V +P + +H +Y N +R V I P+ + I
Sbjct: 200 AELRPSFICFMNAKNVLVEDVRIIGAPMFVVHLLYTENATVRNVMIQT-YPGPHANAIVA 258
Query: 231 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 290
DSS V I DSYI TGDD + +KSG D GI P+ +TI T + +GSET
Sbjct: 259 DSSRFVHISDSYIDTGDDGIVLKSGKDADGIRVNRPTEHVTITNCTVHHAHGAVVIGSET 318
Query: 291 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG--DVGD 348
+G + +V+A +I + GI +K+ GRGG + ++ + MEN GI + +G
Sbjct: 319 AGSIRDVVASNITAIDTENGIRIKSRRGRGGTVDDLRFDNWTMENVGTGIVVTSYYVMGG 378
Query: 349 HPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPT 406
D K P P I I +V ++ I GL P TG+ L+++ G G T
Sbjct: 379 ESDTKEEPVSERTPKFRNIGISNVTIHGAKKVVDIDGLPEMPITGLRLTDVAGSGKVGLT 438
Query: 407 SP--------PLKCSDVSGSAYQVKPWPCSEL 430
+ L+ + SG+ +Q + EL
Sbjct: 439 ARYTDGLELHHLQVNAESGAPFQFESATNLEL 470
>gi|298482165|ref|ZP_07000353.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298271722|gb|EFI13295.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 539
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 100/340 (29%), Positives = 151/340 (44%), Gaps = 62/340 (18%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+++I FG GDG LNTKA +AI + R GG ++ +P G++LTG L S++ LY
Sbjct: 59 EVNIEKFGAKGDGLYLNTKAINDAIKEVNQ--RGGGKVI-IPEGIWLTGPIELLSNVNLY 115
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
+ A++ T D +P+IA S+ R R S I +++ ITG GT DG
Sbjct: 116 TEQNALVLFTGDFEAYPIIAT--SFEGLETR---RCQSPISARNAENIAITG-YGTFDGN 169
Query: 158 GAIW---------WNMWRQ----------------------------------------- 167
G W + W++
Sbjct: 170 GDCWRPVKKGKLTASQWKKLVSSGGVLDEKQEIWYPTAGSLKGAMACKDFNVPEGINTDE 229
Query: 168 ---RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 224
P+ RP L+ + S+ +++ V F+NSP W +HP+ C + + + ++ P S N
Sbjct: 230 EWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQN 289
Query: 225 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 284
D ID +S N I +S GDD + +KSG DE G G P + ++ T G
Sbjct: 290 GDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGF 349
Query: 285 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 324
VGSE SGGV+N+ E VG+ K+ GRGG +
Sbjct: 350 VVGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|262408522|ref|ZP_06085068.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294646518|ref|ZP_06724155.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|262353387|gb|EEZ02481.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292638137|gb|EFF56518.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
Length = 539
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 100/340 (29%), Positives = 152/340 (44%), Gaps = 62/340 (18%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+++I FG GDG LNTKA +AI + +R GG ++ +P G++LTG L S++ LY
Sbjct: 59 EVNIEKFGAKGDGLFLNTKAINDAIKEVN--QRGGGKVI-IPEGIWLTGPIELLSNVNLY 115
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
+ A++ T D +P+IA S+ R R S I +++ ITG GT DG
Sbjct: 116 TEQNALVLFTGDFEAYPIIAT--SFEGLETR---RCQSPISARNAENIAITG-YGTFDGN 169
Query: 158 GAIW---------WNMWRQ----------------------------------------- 167
G W + W++
Sbjct: 170 GDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLKGAMACKDFNVPEGINTDE 229
Query: 168 ---RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 224
P+ RP L+ + S+ +++ V F+NSP W +HP+ C + + + ++ P S N
Sbjct: 230 EWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQN 289
Query: 225 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 284
D ID +S N I +S GDD + +KSG DE G G P + ++ T G
Sbjct: 290 GDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGF 349
Query: 285 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 324
VGSE SGGV+N+ E VG+ K+ GRGG +
Sbjct: 350 VVGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|294807547|ref|ZP_06766344.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345512393|ref|ZP_08791923.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D1]
gi|294445248|gb|EFG13918.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345453872|gb|EEO50012.2| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D1]
Length = 529
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 100/340 (29%), Positives = 152/340 (44%), Gaps = 62/340 (18%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+++I FG GDG LNTKA +AI + +R GG ++ +P G++LTG L S++ LY
Sbjct: 49 EVNIEKFGAKGDGLFLNTKAINDAIKEVN--QRGGGKVI-IPEGIWLTGPIELLSNVNLY 105
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
+ A++ T D +P+IA S+ R R S I +++ ITG GT DG
Sbjct: 106 TEQNALVLFTGDFEAYPIIAT--SFEGLETR---RCQSPISARNAENIAITG-YGTFDGN 159
Query: 158 GAIW---------WNMWRQ----------------------------------------- 167
G W + W++
Sbjct: 160 GDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLKGAMACKDFNVPEGINTDE 219
Query: 168 ---RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 224
P+ RP L+ + S+ +++ V F+NSP W +HP+ C + + + ++ P S N
Sbjct: 220 EWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQN 279
Query: 225 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 284
D ID +S N I +S GDD + +KSG DE G G P + ++ T G
Sbjct: 280 GDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGF 339
Query: 285 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 324
VGSE SGGV+N+ E VG+ K+ GRGG +
Sbjct: 340 VVGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 379
>gi|359414685|ref|ZP_09207150.1| Polygalacturonase [Clostridium sp. DL-VIII]
gi|357173569|gb|EHJ01744.1| Polygalacturonase [Clostridium sp. DL-VIII]
Length = 487
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 154/311 (49%), Gaps = 26/311 (8%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+++ DFG GDG L+T A + +I R + VP G YL L S++T+ L
Sbjct: 56 LNVKDFGAKGDGLELDTAAVQASIAACPLHGR-----IIVPKGRYLLTPIFLKSNITIEL 110
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRER---------PGGRYMSFIHGDGLQDVVITG 149
+GAV+ QD +P++ L G +E P + S I G +++V I G
Sbjct: 111 EEGAVLLGAQDRNKYPILPGLLK-GSSKEEYFLGSWEGDPDDCFASLITGINVENVNIIG 169
Query: 150 ENGTIDGQGAI--WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCS 207
NG IDG +I WW +++ + + RP +I + ++I++ +V +NSP W IHP+
Sbjct: 170 -NGIIDGNASIDNWWFEAKKKRIAW-RPRMIFLVGCKNILVESVTVKNSPSWTIHPLMSE 227
Query: 208 NVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPS 267
++ + I P DSPNTDG+DP+S NV I S GDD +A+KSG PS
Sbjct: 228 DLKFINLYIENPKDSPNTDGLDPESCKNVHILGVNFSVGDDCIAIKSGKIFISKIKTMPS 287
Query: 268 SGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGG------ 321
I IR + + +GSE S G+ N+ E+ GI +KT GRG
Sbjct: 288 QHIYIRNCNMNFGHGAVVLGSEMSSGINNIYVENCLFNETDRGIRIKTRRGRGDTAIIDE 347
Query: 322 -FIRNITVSDV 331
+ RNI ++ V
Sbjct: 348 IYARNIKMNKV 358
>gi|238794982|ref|ZP_04638578.1| Endopolygalacturonase [Yersinia intermedia ATCC 29909]
gi|238725685|gb|EEQ17243.1| Endopolygalacturonase [Yersinia intermedia ATCC 29909]
Length = 442
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 110/321 (34%), Positives = 161/321 (50%), Gaps = 40/321 (12%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
K++I FG G+ L T A + AI + G T++ VPPG YLTG+ L +H+
Sbjct: 15 KLNILAFGADASGQQLATAAIQHAI----DIAAPGDTVV-VPPGRYLTGALFLKNHLIFE 69
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHG--DGLQ--DVVITGENGT 153
L GAV+ +++ ++PL + R G M + G + LQ DV + G +GT
Sbjct: 70 LQTGAVLLGSRELEDYPL---------RQTRVAGIDMVWPTGIINILQCHDVCVCG-SGT 119
Query: 154 IDGQGAIWWNM-------------WRQRTLPFT------RPNLIEFMNSRSIIISNVIFQ 194
IDGQGA+WW+ + QR L + RP + S + +S +
Sbjct: 120 IDGQGAVWWHKFWGTDENGGMLADYSQRGLRWVVDYDCQRPRNLVVYRSEQVEMSGFTSR 179
Query: 195 NSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKS 254
S FWNIH Y ++ + ++ + + P+TDGID DSS V +E +S DD + VK+
Sbjct: 180 ESGFWNIHLCYSQHLYLHHLQV-ENSGGPSTDGIDIDSSQQVRVEHCRVSCNDDNICVKA 238
Query: 255 GWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVK 314
G G + I IR SGI +GSETSGG+E VL E+I GVG +K
Sbjct: 239 GRGAEAERIGATARDIVIRECELLHG-SGITLGSETSGGIEQVLIENITFSGTGVGFRIK 297
Query: 315 TNIGRGGFIRNITVSDVYMEN 335
+ RGGFIR++ VS + M +
Sbjct: 298 SARNRGGFIRHVRVSGLQMTD 318
>gi|116623151|ref|YP_825307.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116226313|gb|ABJ85022.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 436
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 186/405 (45%), Gaps = 54/405 (13%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+ +TD+G DGKT+NT A ++AI ++G ++ PGVYL+G+ L S+M L
Sbjct: 17 EFRVTDYGAKADGKTVNTVALQKAI---DAAAKAGKGVVVFAPGVYLSGALFLKSNMELR 73
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYM----SFIHGDGLQDVVITGENGT 153
L +G I+ QD +PL+ + R G M + ++ +V ++G+ GT
Sbjct: 74 LDEGVEIRGVQDLAAYPLM---------QTRVAGIEMKWPAALLNVYEQSNVRLSGK-GT 123
Query: 154 IDGQGAIWWNM-WRQRTLPFT-------------RPNLIEFMNSRSIIISNVIFQNSPFW 199
+DG G IWW++ W+ R + RP LI+ S+ + + ++ + FW
Sbjct: 124 VDGDGKIWWDLYWKMRREEYEPKGLRWAVDYDCRRPRLIQIYKSQGVDLVSLTLKRPGFW 183
Query: 200 NIHPVYCSNVVIRYVTILAPADS--PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWD 257
+H Y V + +TI D P+TDGID DSSS+V + I DD + +K+G D
Sbjct: 184 TVHICYSERVTVDGLTIRNNTDGKGPSTDGIDIDSSSDVLVAHCDIDCNDDAICLKAGRD 243
Query: 258 EYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYN-VGVGIHVKTN 316
G+ P+ + I +G+ +GSETSGG+ ++ +H+ + + V GI K+
Sbjct: 244 ADGLRVNLPTERVRITDNVVRGGAAGVTIGSETSGGIRHIEVDHLTVMSAVPAGILFKSA 303
Query: 317 IGRGGFIRNITVSDVYM-------------ENARKGIKIAGDVGDHPD-----DKFNP-- 356
RGG I +I + +V A K+ V D PD + P
Sbjct: 304 STRGGTIEDIAIRNVITVGVATPVSITLNWNPAYSYAKLPEGVKDMPDYWRVLTEVVPPG 363
Query: 357 NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 401
+P + I V T Q++ + SP +I+++
Sbjct: 364 KGIPHFRDVRISRVKSTGAQRAFAVSSYAESPLVDFQFKDIDIEA 408
>gi|293369380|ref|ZP_06615965.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|336406828|ref|ZP_08587475.1| hypothetical protein HMPREF0127_04788 [Bacteroides sp. 1_1_30]
gi|292635547|gb|EFF54054.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|335933190|gb|EGM95200.1| hypothetical protein HMPREF0127_04788 [Bacteroides sp. 1_1_30]
Length = 529
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/340 (29%), Positives = 152/340 (44%), Gaps = 62/340 (18%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+++I FG GDG LNTKA +AI + + + GG + +P GV+LTG L S++ LY
Sbjct: 49 EVNIEKFGAKGDGLFLNTKAINDAI---KDVNQRGGGKVIIPEGVWLTGPIELLSNVNLY 105
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
+ A++ T D +P+IA S+ R R S I +++ ITG +GT DG
Sbjct: 106 TEQNALVLFTGDFEAYPIIAT--SFEGLETR---RCQSPISVRNAENIAITG-HGTFDGN 159
Query: 158 GAIW---------WNMWRQ----------------------------------------- 167
G W + W++
Sbjct: 160 GDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLRGAMACKDFNVPEGINTDE 219
Query: 168 ---RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 224
P+ RP L+ + S+ +++ V F+NSP W +HP+ C + + + ++ P S N
Sbjct: 220 EWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQN 279
Query: 225 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 284
D ID +S N I +S GDD + +KSG DE G G P + ++ T G
Sbjct: 280 GDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGF 339
Query: 285 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 324
VGSE SGGV+N+ E VG+ K+ GRGG +
Sbjct: 340 VVGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 379
>gi|198277233|ref|ZP_03209764.1| hypothetical protein BACPLE_03445 [Bacteroides plebeius DSM 17135]
gi|198269731|gb|EDY94001.1| polygalacturonase (pectinase) [Bacteroides plebeius DSM 17135]
Length = 478
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 157/347 (45%), Gaps = 60/347 (17%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+++I DFG V DGKTLNT+A +AI Q + GG + +P G++LTG L S++ LY
Sbjct: 13 EVNIKDFGAVADGKTLNTEAINKAI---QKVSARGGGKVIIPQGLWLTGPIELQSNVNLY 69
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
+ ++I + + ++P+I S+ R R S I +++ ITG +G DG
Sbjct: 70 TEENSLILFSDNFNDYPIIET--SFEGLETR---RCQSPISAVNAENIAITG-HGVFDGA 123
Query: 158 GAIW------------W------------NMWR--------------------------- 166
G W W N+W
Sbjct: 124 GDSWRPVKKGKMTESQWKSLLASGGVVENNIWYPTEGSLKGAKACKEFNNPEGIETEEQW 183
Query: 167 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 226
P+ RP L+ +++++ V F+NSP W +HP+ C ++ I V + P S N D
Sbjct: 184 NEIRPWLRPVLLSLAKCKNVLLKGVTFKNSPSWCLHPLSCEHITIDGVKVFNPWYSQNGD 243
Query: 227 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 286
+D +S +N + ++ GDD + +KSG DE G G P + ++ G V
Sbjct: 244 ALDLESCTNALVINNVFDAGDDAICIKSGKDEDGRKRGEPCQNVIVKNNVVLHGHGGFVV 303
Query: 287 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
GSE SGGV+N+ VG+ K+ GRGG + NI + ++ M
Sbjct: 304 GSEMSGGVKNIYVSDCTFLGTDVGLRFKSTRGRGGVVENIHIHNINM 350
>gi|160887026|ref|ZP_02068029.1| hypothetical protein BACOVA_05040 [Bacteroides ovatus ATCC 8483]
gi|423288884|ref|ZP_17267735.1| hypothetical protein HMPREF1069_02778 [Bacteroides ovatus
CL02T12C04]
gi|156107437|gb|EDO09182.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|295086775|emb|CBK68298.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
gi|392668974|gb|EIY62466.1| hypothetical protein HMPREF1069_02778 [Bacteroides ovatus
CL02T12C04]
Length = 539
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/340 (29%), Positives = 152/340 (44%), Gaps = 62/340 (18%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+++I FG GDG LNTKA +AI + + + GG + +P GV+LTG L S++ LY
Sbjct: 59 EVNIEKFGAKGDGLFLNTKAINDAI---KDVNQRGGGKVIIPEGVWLTGPIELLSNVNLY 115
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
+ A++ T D +P+IA S+ R R S I +++ ITG +GT DG
Sbjct: 116 TEQNALVLFTGDFEAYPIIAT--SFEGLETR---RCQSPISVRNAENIAITG-HGTFDGN 169
Query: 158 GAIW---------WNMWRQ----------------------------------------- 167
G W + W++
Sbjct: 170 GDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLRGAMACKDFNVPEGINTDE 229
Query: 168 ---RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 224
P+ RP L+ + S+ +++ V F+NSP W +HP+ C + + + ++ P S N
Sbjct: 230 EWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQN 289
Query: 225 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 284
D ID +S N I +S GDD + +KSG DE G G P + ++ T G
Sbjct: 290 GDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGF 349
Query: 285 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 324
VGSE SGGV+N+ E VG+ K+ GRGG +
Sbjct: 350 VVGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|399032800|ref|ZP_10732032.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398068822|gb|EJL60216.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 456
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 119/413 (28%), Positives = 188/413 (45%), Gaps = 53/413 (12%)
Query: 30 VPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFN 89
+P + + SI DFG V K ++A +AI + ++GG ++ +P G +LT +
Sbjct: 44 IPDFSKCKEFSIVDFGAVQGNKNKTSEAINKAISKAN---KAGGGVVVIPEGEWLTKKIH 100
Query: 90 LTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITG 149
S++ L+L KGAV+ ++ ++ + + S G E Y I+ +++ ITG
Sbjct: 101 FKSNVNLHLNKGAVLLFSETPDDY--LPAVNSTWEGYE--CYNYSPLIYAYKCKNIAITG 156
Query: 150 ENGTIDGQGAIW--W------NMWRQRTLPFT-------------------RPNLIEFMN 182
E G + + IW W +M + L F RP I+F
Sbjct: 157 E-GELKAKMDIWKEWFARPKAHMESLKRLYFLASYNKPMKERQMVNDSAHFRPQFIQFNR 215
Query: 183 SRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSY 242
+I++ V NSPFW IHP +VV+R + + A N DG+DP+ S NV IE+
Sbjct: 216 CENILMDGVTITNSPFWTIHPFLSKDVVLRNLKVYAHGH--NNDGVDPEMSQNVLIENCI 273
Query: 243 ISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHI 302
GDD +A+KSG ++ S I +R T + +A+GSE SGG+ENV ++
Sbjct: 274 FDQGDDAIAIKSGSNQDAWRLNTSSKNIVMRNCTVKNGHQLVAIGSELSGGIENVFIDNC 333
Query: 303 NLYNVGVGIH---VKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFN---- 355
+ + H +KTN RGG+ VS++YM N G AG +G D +
Sbjct: 334 TVVDGAKLNHLLFIKTNERRGGY-----VSNIYMSNIVSGKIDAGILGIDTDVLYQWRDL 388
Query: 356 ----PNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 404
L + I + ++ T V+ I G K P I L N+ + V G
Sbjct: 389 VPTIERRLTPIKNIYLDNIKATNVKFISKISGQKELPVENIFLKNVTVDVVQG 441
>gi|403057563|ref|YP_006645780.1| polygalacturonase [Pectobacterium carotovorum subsp. carotovorum
PCC21]
gi|402804889|gb|AFR02527.1| putative polygalacturonase [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 460
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 124/441 (28%), Positives = 199/441 (45%), Gaps = 52/441 (11%)
Query: 2 FRFLVTLSILLSYFNCFSLA-SVVTCSGIVPMRYRNDKISITDFGGVGD--GKTLNTKAF 58
R + LS++ S C +L T +++ + +T +G G LNT+AF
Sbjct: 1 MRSGLALSLMAS---CITLGIQAGTAQAASSVKFPDKTCDVTQYGAEGHRLQIALNTQAF 57
Query: 59 REAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAP 118
++AI +GG ++VP G YL L S++ L LAK A I A+ + +
Sbjct: 58 QKAI---DDCAAAGGGTVHVPRGNYLVDPLFLKSNIRLDLAKDATIVASTEEAAYRATEK 114
Query: 119 LPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPF------ 172
+ E G ++ FI Q+V ITG+ GTIDGQGA+WW WR+
Sbjct: 115 T----KYAEAENG-WLPFISIADAQNVAITGQ-GTIDGQGAVWWERWRENIRATGKKGGT 168
Query: 173 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDS 232
RP LI +S ++++ V +SP +++ Y +V + IL+P +PNTD IDP
Sbjct: 169 DRPRLIYIKSSSNVLVDGVTLTHSPSFHVVMRYSHDVDVNGTRILSPWHAPNTDAIDPID 228
Query: 233 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSG 292
S N+ I ++YI DD +A+K+ + G + + GI++GSETSG
Sbjct: 229 SQNIRITNNYIDCNDDHIAIKAEKPDSRFPNGVVDNIYIANNILKQG--RGISIGSETSG 286
Query: 293 GVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG-------- 344
GV NVL E+ GI +KT G+GG ++NIT + M + + A
Sbjct: 287 GVNNVLVENNQFEGSMYGIRIKTLRGKGGEVKNITYRNTKMVDVEIPLVFAAYYKAAPIV 346
Query: 345 -------------DVGDH-------PDDKFNPNALPVVNGITIKDVWGT-KVQQSGLIQG 383
+G+ P F+ P + +TI+++ T K + + I G
Sbjct: 347 QAEVDKMLAEGGFTMGEQIYPPDTDPAQPFDQYKTPHFSNVTIENLESTGKTKAAAYIIG 406
Query: 384 LKNSPFTGICLSNINLQGVAG 404
+ +P +G N+ + G
Sbjct: 407 VPEAPLSGFHFDNVRIDADKG 427
>gi|329957312|ref|ZP_08297832.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328523025|gb|EGF50128.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 452
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 195/405 (48%), Gaps = 55/405 (13%)
Query: 29 IVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVY-LTGS 87
IVP + + +T++G D + A +AI GG + +P G Y + G+
Sbjct: 41 IVPPAFADTIYDVTEYGAKDDTAFDSRPAILKAI---NQCNTDGGGTVLIPAGNYFIKGA 97
Query: 88 FNLTSHMTLYLAKGAVIKATQDTWNW-PLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVV 146
L S++ L++A+GA ++ + + ++ P++ + G E Y FI+ +V
Sbjct: 98 ITLKSNINLHIAEGARLEFSTEAADYLPMVL---TKWEGTE--CFNYSPFIYAYQCTNVA 152
Query: 147 ITGENGTIDGQGAIWWNMW---------RQRTL---------------PFTRPNLIEFMN 182
+TG+ GTIDG G++ +N W R R + + RP +I+F
Sbjct: 153 VTGK-GTIDGNGSVTFNDWHAIQGPAVDRLRQMGIDSVPVYERVFGEGHYLRPCMIQFYG 211
Query: 183 SRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSY 242
+++++ ++ +SPFW IHPV+C NV +R V I +++ N DG DP+SS+NV IE
Sbjct: 212 CKNVLVEDLKIYDSPFWIIHPVFCDNVTVRNVYI--DSNNYNNDGCDPESSTNVLIEGMD 269
Query: 243 ISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHI 302
+ GDD +A+KSG D+ G G + + IR + I +GSE SGGV N+ E
Sbjct: 270 FNVGDDGIAIKSGRDQDGWRIGQATENVIIRNCHFAR--WAITIGSEMSGGVRNIYIEDC 327
Query: 303 NLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG-IKIAGDV-----GDHPDDKFNP 356
+ + GI+ K+N+ RGG+ N+ + + + G I + G+HP
Sbjct: 328 KIDSCRNGIYFKSNLDRGGYFENLNMRRIEADVCLWGVINFRTNYHGYRGGNHP------ 381
Query: 357 NALPVVNGITIKDVWGTKVQQSGLI-QGLKNSPFTGICLSNINLQ 400
+ I I+DV +V L+ GL + I L NI ++
Sbjct: 382 ---TLFRNICIEDVTCNRVDSVALMANGLPEAKLYDITLRNITVK 423
>gi|383642336|ref|ZP_09954742.1| glycoside hydrolase family 28 [Sphingomonas elodea ATCC 31461]
Length = 489
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 197/437 (45%), Gaps = 67/437 (15%)
Query: 29 IVPMRYRNDKISITDFGGV-GDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGS 87
+VP + + IT+FG GD ++ + R +G + VP G++L+G
Sbjct: 48 LVPDFRHSRRFQITEFGARPGDKQSTSIAIARAIRAANA----AGSGSVIVPAGIWLSGK 103
Query: 88 FNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVI 147
+L S++ L+LA+GA+++ + D ++ + P+ + G E Y I+ ++V I
Sbjct: 104 IHLESNVNLHLARGAILRFSDDPQDY--LPPVQTSWEGIE--CFNYSPLIYAFDCENVAI 159
Query: 148 TGENGTIDGQGAIWWNMWRQR-----------------TLPFT-----------RPNLIE 179
TG G I+ W +W R +P RP+LI+
Sbjct: 160 TGP-GRIEPV-LDRWKIWSARPKLHMDALVALYDMAYRNVPVADRQMAIGQNNLRPHLIQ 217
Query: 180 FMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIE 239
F R++++ ++ + SPFW +HP+ C +V IR V+I A N DG+DP+ S NV IE
Sbjct: 218 FNRCRNVLVEDISIRGSPFWTLHPLLCRDVTIRRVSI--QAHGHNNDGVDPEMSQNVLIE 275
Query: 240 DSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLA 299
D GDD V+VKSG D P + +R + +AVGSE SGG+EN+
Sbjct: 276 DCVFDQGDDAVSVKSGRDMDAWRLATPCRNVVVRNCRVLNGHQLMAVGSELSGGIENIWV 335
Query: 300 EHINLYNVGVG-----------IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGD 348
+ + G G ++VKTN RGG++RN+ +S V +AG V
Sbjct: 336 DDCHFVGDGRGGDDHAVPINNLLYVKTNERRGGYVRNVHMSRV------TATTLAGSVLA 389
Query: 349 HPDDKFNP---------NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL 399
D L + + + DV + Q +I+G ++ P + LS + +
Sbjct: 390 VETDVLYQWRTLLPTYVRRLTAIERLRVSDVHVQQAQSVAVIKGERDLPIQDVRLSRVRV 449
Query: 400 QGVAGPTSPPLKCSDVS 416
+ V+G + DV+
Sbjct: 450 ERVSGTPTIVENARDVT 466
>gi|325299708|ref|YP_004259625.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319261|gb|ADY37152.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 468
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 186/402 (46%), Gaps = 57/402 (14%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
+I DFG D T + I + GG + VP G + TG L S++ L+++
Sbjct: 49 NIMDFGAKPD--TPDAPCHEAINQAIMACNQEGGGTVLVPEGTFYTGPITLKSNVNLHVS 106
Query: 100 KGAVIKAT--QDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
+GAV+K + QD + +I P I+ G ++ +TG+ G IDGQ
Sbjct: 107 EGAVLKFSTDQDLYFPAVITRWEGLDCYNAHP------LIYAYGETNIALTGK-GVIDGQ 159
Query: 158 GAI--WWNM-------W-----------RQRTLPFT-----------------RPNLIEF 180
G+ WW M W R+R + + RP LI F
Sbjct: 160 GSNENWWYMCGAPRYGWKEGMRSQKLGSRERLMGYAELKRPIYERVMTPEDGLRPQLINF 219
Query: 181 MNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIED 240
+ +++I +V NSPFW IHP++C ++++R V I PN DG DP+S NV IE+
Sbjct: 220 YSCNTVLIEDVTLLNSPFWVIHPLFCESLIVRGVKIFNRG--PNGDGCDPESCKNVLIEN 277
Query: 241 SYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAE 300
TGDD +A+KSG +E G + PS I +R + G+ +GSE SGG N+ E
Sbjct: 278 CRFDTGDDCIAIKSGRNEDGRKWNIPSENIVVRNCEMKNGHGGVVIGSEISGGYRNLYVE 337
Query: 301 HINLYNVGVG--IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNA 358
+ + + I +KT+ RGG I N+ V ++ + + + + ++ ++ N
Sbjct: 338 DCVMDSPQLDRVIRIKTSTCRGGVIENVFVRNIKVGQCNEAV-LRINLKYEEREQCNRGF 396
Query: 359 LPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 400
P V + +K+V K + + GL + +SN++L+
Sbjct: 397 DPTVRNVHLKNVTCEKSRYGIVAIGLDDDKH----VSNVSLE 434
>gi|339022449|ref|ZP_08646391.1| glycoside hydrolase family 28 [Acetobacter tropicalis NBRC 101654]
gi|338750533|dbj|GAA09695.1| glycoside hydrolase family 28 [Acetobacter tropicalis NBRC 101654]
Length = 438
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 127/426 (29%), Positives = 198/426 (46%), Gaps = 58/426 (13%)
Query: 30 VPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFN 89
+P + + +G DG+T + A + AI +GG ++ + G +L+G +
Sbjct: 3 IPSHAASSRCDPVTYGARHDGRTNDGPAIQRAITACS---EAGGGMVSLTSGTWLSGPLS 59
Query: 90 LTSHMTLYLAKGAVIKATQDT--WNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVI 147
L +H+TL L +G+ + + DT ++W + +PG +S I +QDV I
Sbjct: 60 LKNHVTLNLGQGSTLLGSSDTRLFHWAFLGKA-------AQPGEALVSAI---DVQDVAI 109
Query: 148 TGENGTIDGQGA-IWW----NMWRQRT---LPF-------------TRPNLIEFMNSRSI 186
TG+ G IDG GA +WW + +T LP+ RP LIEF + +
Sbjct: 110 TGQ-GHIDGNGAAVWWPQAVRAHKTQTSGPLPYGPDYPGVPAANGLPRPWLIEFSHVQHG 168
Query: 187 IISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTG 246
IS V NSP W + S + I ++TI PA S NTDGID SS +V + I+TG
Sbjct: 169 RISGVTATNSPMWTVVVRESSQIKIDHLTIRNPASSRNTDGIDLVSSDHVTMSTLDIATG 228
Query: 247 DDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYN 306
DD +A+KSG + G A S IT R G+++GSE + G ++ ++ N
Sbjct: 229 DDNIAIKSGLRQPGRAVSDIS--ITQSRF---GEGHGLSIGSELANGAHHIRISDVSFQN 283
Query: 307 VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP---------DDKFNP- 356
G+ +K+ RGG I I+ V M + R + I+ P D P
Sbjct: 284 TLSGLRIKSGRDRGGDIGWISAEHVMMNHVRAPLSISDYYAGQPGGTQKTVSMTDPAAPV 343
Query: 357 -NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDV 415
+ P ++ +TI D+ + +G++ GL +P G+ L NI L G L+ S V
Sbjct: 344 TSTTPHIHDVTITDLTAKNAETAGVVLGLPEAPIEGLTLRNIRLSARKG-----LQFSHV 398
Query: 416 SGSAYQ 421
SG A +
Sbjct: 399 SGRASE 404
>gi|354594579|ref|ZP_09012618.1| hypothetical protein CIN_13140 [Commensalibacter intestini A911]
gi|353672255|gb|EHD13955.1| hypothetical protein CIN_13140 [Commensalibacter intestini A911]
Length = 430
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 127/413 (30%), Positives = 190/413 (46%), Gaps = 57/413 (13%)
Query: 44 FGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAV 103
+GG DG T+NT A ++A+ + GG ++ + GV+L+G L S++T L +G V
Sbjct: 19 YGGRADGNTINTDAIQKAV---DMCAQYGGGVVLLSKGVWLSGPITLKSNITFSLGQGTV 75
Query: 104 IKA--TQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGA-I 160
+KA T D + I + P + +FI D + DV I G+ GTIDG G
Sbjct: 76 LKANNTDDQFKNAFI----------DYPVQKGEAFILADHVHDVSIVGQ-GTIDGDGQQT 124
Query: 161 WWNMWRQ-----------------RTLPFT----RPNLIEFMNSRSIIISNVIFQNSPFW 199
WW +Q +P RP LIEF + +++ + V+ N+P W
Sbjct: 125 WWAKAKQINALLHQGNDQLFKQEYSGVPIANGVPRPWLIEFNDVQNVHLKGVLLTNAPMW 184
Query: 200 NIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEY 259
N+ +V I + I P DSPNTDGID SS + I D ISTGDD +++KSG +
Sbjct: 185 NVVIRSSQDVNIDTIKIQNPKDSPNTDGIDIVSSQYIQISDVDISTGDDNISIKSGLQQ- 243
Query: 260 GIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 319
P+ ITI+ GI++GSET+ G+ V ++I+ GI +K+ R
Sbjct: 244 --GNALPARDITIKNSLMHDGH-GISIGSETANGIGKVTIQNIHFSGSTNGIRIKSQRDR 300
Query: 320 GGFIRNITVSDVYMENARKGIKIAG--DVGDHPDDKFNP--------NALPVVNGITIKD 369
G I ITV + MEN I I V + F + P+++ I + D
Sbjct: 301 GNSIGPITVDHIQMENVTNPIVINASYSVNSYKKRSFKEALKQKELTSLTPLIHDILLSD 360
Query: 370 VWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQV 422
+ S ++ GL + I L +I +Q G LK V G +QV
Sbjct: 361 IHVVNADNSIILSGLPEAFIWNIVLDHIFMQAKHG-----LKARYVQGVMHQV 408
>gi|410664607|ref|YP_006916978.1| polygalacturonase pga28A [Simiduia agarivorans SA1 = DSM 21679]
gi|409026964|gb|AFU99248.1| polygalacturonase pga28A [Simiduia agarivorans SA1 = DSM 21679]
Length = 466
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 116/408 (28%), Positives = 179/408 (43%), Gaps = 64/408 (15%)
Query: 41 ITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAK 100
+ DFG V D + A R I +GG + GVY T + +L S++ L++A+
Sbjct: 60 VEDFGAVADS---DEDATRAIADAIAAAHAAGGGRVVCAKGVYQTAAIHLKSNVELHVAE 116
Query: 101 GAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG-- 158
GA + D + + + + G E G Y I+ G Q++ +TG G +DG
Sbjct: 117 GATLSFVTDPSRY--LPAVFTRWEGMEMMG--YSPLIYAYGQQNIAVTG-GGVLDGNAND 171
Query: 159 AIWW--------NMW-------------------------RQRTLP---FTRPNLIEFMN 182
WW W R+R F RP ++F
Sbjct: 172 QTWWPWKGAHKERHWDLIEGEDQRPARDALQADVLAGVDPRERHYAEGSFLRPAFVQFYA 231
Query: 183 SRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSY 242
+ I V NSPFW +HPV C +VV+R VT + PN DG DP+S NV IE
Sbjct: 232 CNQVKIEGVTLVNSPFWLLHPVLCESVVVRGVT--CRSHGPNNDGCDPESCKNVLIEQCV 289
Query: 243 ISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEH- 301
TGDD +A+KSG +E G G + +R G+ +GSE SGG N+ EH
Sbjct: 290 FDTGDDCIALKSGRNEDGRRVGVAVENVVVRHCEMRDGHGGLVLGSEISGGARNIFMEHC 349
Query: 302 -INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-----AGDVGDHPDDKFN 355
+N ++ + KTN RGG I + V V+++ A++ + + G+ G+H
Sbjct: 350 SMNSPHLERALRFKTNARRGGVIEKVRVRHVHIQQAQEALVVNFHYEEGEAGEH------ 403
Query: 356 PNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 403
+P V I ++D+ +V++ ++G ++P I L VA
Sbjct: 404 ---MPTVRDILVEDLRCDQVERVFHLRGFAHNPVGAITLRRAQFGRVA 448
>gi|227114428|ref|ZP_03828084.1| putative polygalacturonase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 460
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 123/440 (27%), Positives = 199/440 (45%), Gaps = 50/440 (11%)
Query: 2 FRFLVTLSILLSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGD--GKTLNTKAFR 59
R + LS++ S A + + V ++ + +T +G G LNT+AF+
Sbjct: 1 MRSGLALSLMASCITLGIQAGIAQAASSV--KFPDKTCDVTQYGAEGHRLQIALNTQAFQ 58
Query: 60 EAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPL 119
+AI +GG ++VP G YL L S++ L LAK A I A+ + +
Sbjct: 59 KAI---DDCAAAGGGTVHVPRGNYLVDPLFLKSNIRLDLAKDATIVASTEEAAYRATEKT 115
Query: 120 PSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPF------T 173
+ E G ++ FI Q+V ITG+ GTIDGQGA+WW WR+
Sbjct: 116 ----KYAEAENG-WLPFISIADAQNVAITGQ-GTIDGQGAVWWERWRENIRATGKKGGTD 169
Query: 174 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 233
RP LI +S ++++ V +SP +++ Y +V + IL+P +PNTD IDP S
Sbjct: 170 RPRLIYIKSSSNVLVDGVTLTHSPSFHVVMRYSHDVDVNGTRILSPWHAPNTDAIDPIDS 229
Query: 234 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 293
N+ I ++YI DD +A+K+ + G + + GI++GSETSGG
Sbjct: 230 QNIRITNNYIDCNDDHIAIKAEKPDSRFPNGVVDNIYIANNILKQG--RGISIGSETSGG 287
Query: 294 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG--------- 344
V NVL E+ GI +KT G+GG ++NIT + M + + A
Sbjct: 288 VNNVLVENNQFEGSMYGIRIKTLRGKGGEVKNITYRNTKMVDVEIPLVFAAYYKAAPIVQ 347
Query: 345 ------------DVGDH-------PDDKFNPNALPVVNGITIKDVWGT-KVQQSGLIQGL 384
+G+ P+ F+ P + +TI+++ T K + + I G+
Sbjct: 348 AEVDKMLAEGGFTMGEQIYPPDTDPEQLFDQYKTPHFSNVTIENLESTGKTKAAAYIIGV 407
Query: 385 KNSPFTGICLSNINLQGVAG 404
+P +G N+ + G
Sbjct: 408 PEAPLSGFHFDNVRIDADKG 427
>gi|218134189|ref|ZP_03462993.1| hypothetical protein BACPEC_02079 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991564|gb|EEC57570.1| polygalacturonase (pectinase) [[Bacteroides] pectinophilus ATCC
43243]
Length = 480
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 157/354 (44%), Gaps = 63/354 (17%)
Query: 34 YRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSH 93
+R + I D+G V G+ NT+A AI + GG + VP G++LTG + +
Sbjct: 18 FREAQYDIRDYGAVAGGRVSNTEAINAAI---RTCSEEGGGHVIVPSGLWLTGPVRILTG 74
Query: 94 MTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGT 153
+ L++ GAV+ ++ +PLI + Y +P R +S I Q+V ITGE GT
Sbjct: 75 VDLHVENGAVLMFDKNREEYPLI--ISDY---EGQPRIRTVSPIMAADAQNVAITGE-GT 128
Query: 154 IDGQGAIW------------WN-----------------MW------------------- 165
IDG G +W W+ MW
Sbjct: 129 IDGNGELWRPLKKFKVTQRQWDKFVATSPDTVIPTNEGGMWFPTVTSYDGCMEGEPSLDD 188
Query: 166 ------RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP 219
+R F RP ++ F+ ++I V QNSP WN+HP+ C+N+ + I P
Sbjct: 189 PDALKKAERHYDFYRPVMVNFVRCDRVLIDGVTLQNSPAWNVHPLLCTNLTVSNAFIKNP 248
Query: 220 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS 279
+ N DGID +S V I ++ GDD + +KSG +E G P+ + I T
Sbjct: 249 YYAQNGDGIDVESCQYVEIYNTKFEVGDDGICLKSGKNEIGRRIKTPTKYVYIHDCTVMH 308
Query: 280 PFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
G VGSE S G+ V ++ VGI K+ +GRGG + NI + ++ M
Sbjct: 309 AHGGFVVGSEMSRGMSEVYVQNCAFMGTDVGIRFKSQLGRGGIVENINLENINM 362
>gi|383114440|ref|ZP_09935204.1| hypothetical protein BSGG_5145 [Bacteroides sp. D2]
gi|382948584|gb|EIC71811.1| hypothetical protein BSGG_5145 [Bacteroides sp. D2]
Length = 529
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 152/340 (44%), Gaps = 62/340 (18%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+++I FG GDG LNTKA +AI + + + GG + +P GV+LTG L S++ LY
Sbjct: 49 EVNIEKFGAKGDGLFLNTKAINDAI---KDVNQRGGGKVIIPEGVWLTGPIELLSNVNLY 105
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
+ A++ T + +P+IA S+ R R S I +++ ITG +GT DG
Sbjct: 106 TEQNALVLFTGNFEAYPIIAT--SFEGLETR---RCQSPISARNAENIAITG-HGTFDGN 159
Query: 158 GAIW---------WNMWRQ----------------------------------------- 167
G W + W++
Sbjct: 160 GDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLKGAMACKDFNVPEGINTDE 219
Query: 168 ---RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 224
P+ RP L+ + S+ +++ V F+NSP W +HP+ C + + + ++ P S N
Sbjct: 220 EWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQN 279
Query: 225 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 284
D ID +S N I +S GDD + +KSG DE G G P + ++ T G
Sbjct: 280 GDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGF 339
Query: 285 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 324
VGSE SGGV+N+ E VG+ K+ GRGG +
Sbjct: 340 VVGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 379
>gi|182416708|ref|ZP_02948108.1| glycoside Hydrolase Family 28 [Clostridium butyricum 5521]
gi|237667049|ref|ZP_04527033.1| glycoside Hydrolase Family 28 [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182379433|gb|EDT76927.1| glycoside Hydrolase Family 28 [Clostridium butyricum 5521]
gi|237655397|gb|EEP52953.1| glycoside Hydrolase Family 28 [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 511
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/389 (29%), Positives = 185/389 (47%), Gaps = 61/389 (15%)
Query: 65 IQHLRRSGGTLLYVP------PGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWN--WPLI 116
I ++GG + +P P +Y +GS L S++ LY+ + A+IK ++ N +PL+
Sbjct: 94 IDDANKNGGGKVIIPGGTKEEPKIYYSGSITLKSNVELYIEENAIIKFLRNKSNRFYPLV 153
Query: 117 APLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDG-QGAIWWNMWR--------- 166
Y R + FI+ +++ I+G+ G +DG W W+
Sbjct: 154 -----YTRWEGVEMMNFSPFIYSYEAENISISGK-GVLDGCADEFNWMPWKFGYFNEEDQ 207
Query: 167 --QRTLPFT---------------------RPNLIEFMNSRSIIISNVIFQNSPFWNIHP 203
QR F RP I+ S++I+I ++ NSPFW ++P
Sbjct: 208 QIQRERLFNLGQENADVRTRRIFNDEISTIRPPFIQPYKSKNILIKDITILNSPFWEVNP 267
Query: 204 VYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAY 263
V C N+ I +T+ + N DG+DP+S ++ IED + +TGDD +A+KSG + G
Sbjct: 268 VLCENIKIDSITV--DSHLYNNDGVDPESCKDMIIEDCHFTTGDDCIAIKSGRNNEGRNI 325
Query: 264 GHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYN---VGVGIHVKTNIGRG 320
G PS I IR GI +GSE SGGV ++ A H N ++ + I KTN RG
Sbjct: 326 GVPSQNIIIRNNKFEDGHGGITIGSEISGGVNDIFA-HDNYFDSSELDYPIRFKTNAERG 384
Query: 321 GFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGIT---IKDVWGTKVQQ 377
G + NI V + + ++ + I D ++ N N +P++ IT IK V G +
Sbjct: 385 GKLENIYVKNSVVNKSKIAV-IHADF--FYEEGTNGNYMPILRNITLSNIKTVEGGSIDA 441
Query: 378 SG--LIQGLKNSPFTGICLSNINLQGVAG 404
+ ++G K++P I + ++ L GV G
Sbjct: 442 NNALFLKGFKDAPIENILIEDVYLNGVKG 470
>gi|253687486|ref|YP_003016676.1| glycoside hydrolase family protein [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251754064|gb|ACT12140.1| glycoside hydrolase family 28 [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 460
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 127/443 (28%), Positives = 202/443 (45%), Gaps = 56/443 (12%)
Query: 2 FRFLVTLSILLSYFNCFSLA-SVVTCSGIVPMRYRNDKISITDFGGVGD--GKTLNTKAF 58
R + LS++ S C +L T +++ + +T +G G LNT+AF
Sbjct: 1 MRSGLALSLMAS---CITLGIQAGTAQAASSVKFPDKICDVTQYGAEGHRLQIALNTEAF 57
Query: 59 REAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAP 118
++AI +GG ++VP G YL L S++ L LAK A I A+ + IA
Sbjct: 58 QKAI---DDCAAAGGGTVHVPRGNYLVDPLFLKSNIRLDLAKDATIVASTE------IAA 108
Query: 119 LPSYGRGR--ERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPF---- 172
+ + + E G ++ FI Q+V ITG+ GTIDGQGA+WW WR+
Sbjct: 109 YRATEKTKYAEAENG-WLPFISIADAQNVAITGQ-GTIDGQGAVWWERWRENIRATGKKG 166
Query: 173 --TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 230
RP LI +S ++++ V +SP ++I Y +V + IL+P +PNTD IDP
Sbjct: 167 GTDRPRLIYIKSSSNVLVDGVTLTHSPSFHIVMRYSHDVDVNGTRILSPWHAPNTDAIDP 226
Query: 231 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 290
S N+ I ++YI DD +A+K+ + G + + GI++GSET
Sbjct: 227 IDSQNIRITNNYIDCNDDHIAIKAEKPDSRFPNGVVDNIYIANNILKQG--RGISIGSET 284
Query: 291 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG------ 344
SGGV NVL E+ GI +KT G+GG ++NIT + M + + A
Sbjct: 285 SGGVNNVLVENNQFEGSMYGIRIKTLRGKGGEVKNITYRNTKMVDVEIPLVFAAYYKAAP 344
Query: 345 ---------------DVGDH-------PDDKFNPNALPVVNGITIKDVWGT-KVQQSGLI 381
+G+ P F+ P + +TI+++ T K + + I
Sbjct: 345 IVQAEVDKMLAEGGFTMGEQIYPPDTDPAQPFDQYKTPHFSNVTIENLESTGKTKAAAYI 404
Query: 382 QGLKNSPFTGICLSNINLQGVAG 404
G+ +P +G N+ + G
Sbjct: 405 IGVPEAPLSGFHFDNVRIDADKG 427
>gi|255036065|ref|YP_003086686.1| glycoside hydrolase [Dyadobacter fermentans DSM 18053]
gi|254948821|gb|ACT93521.1| glycoside hydrolase family 28 [Dyadobacter fermentans DSM 18053]
Length = 455
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 123/413 (29%), Positives = 180/413 (43%), Gaps = 65/413 (15%)
Query: 29 IVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSF 88
+VP R + ITDFG V K + A R+AI ++GG + VP G +LTG
Sbjct: 44 LVPDFSRVKRFLITDFGAVAGDKEKISGAIRQAI---DAANQAGGGKVVVPAGEWLTGKV 100
Query: 89 NLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVIT 148
+L S++ L+L KGAV+ ++ ++ + + S G E Y I+ ++V IT
Sbjct: 101 HLKSNVNLHLDKGAVLLFSEKPEDY--LPAVHSSWEGIE--CYNYSPLIYAYQCKNVAIT 156
Query: 149 GENGTIDGQGAIWWNMWRQRTLPFT----------------------------RPNLIEF 180
GE G + + +W W R P RP I+F
Sbjct: 157 GE-GEVRAKMEVW-KEWFARPKPHMESIKRLYNLAQDYTPVEQRQMVNDTAHLRPQFIQF 214
Query: 181 MNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIED 240
++++ NSPFW IHP C NVVI + + A N DG+DP+ S NV I D
Sbjct: 215 NRCENVLMEGFTVTNSPFWTIHPYLCKNVVISRLKVYAHGH--NNDGVDPEMSQNVFITD 272
Query: 241 SYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAE 300
GDD +A+KSG + G PS I IR +T + +A+GSE SGG+ENV
Sbjct: 273 CVFDQGDDAIAIKSGRNPEGWRLKTPSKNIVIRNLTVKNGHQLVAIGSELSGGIENVDIS 332
Query: 301 HINLYNVGVGIH---VKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD------ 351
+ + H +KTN GG+++NI Y N G G +G D
Sbjct: 333 QCQVVDGAKLNHLLFIKTNERMGGYVKNI-----YASNLTAGKIDLGVLGIETDVLYQWR 387
Query: 352 -------DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNI 397
K P + ++ I++KD V+ I G K P + + NI
Sbjct: 388 TLVPTKIRKLTPISDIYLSNISVKD-----VKFESRILGQKELPVKNVSMKNI 435
>gi|383120469|ref|ZP_09941197.1| hypothetical protein BSIG_2521 [Bacteroides sp. 1_1_6]
gi|382985005|gb|EES68560.2| hypothetical protein BSIG_2521 [Bacteroides sp. 1_1_6]
Length = 528
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 186/417 (44%), Gaps = 61/417 (14%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+++I DFG + DG TLNT+A AI + + GG + +P G++LTG L S++ LY
Sbjct: 58 EVNIRDFGALSDGVTLNTEAINNAI---KAVNSKGGGKVIIPEGLWLTGPVVLLSNVNLY 114
Query: 98 LAKGAVIKATQDTWNWPLI-------------APLPSY--------GRGRERPGGRYMSF 136
K A+I + DT +P+I +P+ + G G G
Sbjct: 115 AEKNALIVFSSDTSLYPIIDTSFEGLDTKRCQSPISAMNAENIAITGSGVFDGAGDRWRP 174
Query: 137 IHGDGL-----QDVVITGENGTIDGQGAIWW----------------NMWRQRT------ 169
+ D + +++V +G G +D G +W+ N ++ T
Sbjct: 175 VKKDKMTERQWKNLVSSG--GKVDENGKVWYPDAGALKASVLMTGQNNGQKEITDEEWTY 232
Query: 170 -LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGI 228
+ RP ++ + S+ I++ V F+NSP W IHP+ C ++ + V + P S N D +
Sbjct: 233 MKSWLRPVMLSIVKSKRILLEGVTFKNSPGWCIHPLSCESLTLNDVKVFNPWYSQNGDAL 292
Query: 229 DPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 288
D +S NV + + + GDD + +KSG DE G G P + I+ T G +GS
Sbjct: 293 DVESCKNVLVTNCFFDAGDDAICLKSGKDEDGRRRGEPCENVIIKNNTVLHGHGGFVIGS 352
Query: 289 ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM---ENARKGIKIAGD 345
E SGGV NV + VG+ K+ GRGG + NI + ++ M N + +
Sbjct: 353 EMSGGVRNVYVSGCSFVGTDVGLRFKSTRGRGGVVENIFIDNINMIDIPNDALTMDLYYA 412
Query: 346 VGDHPDDKFNPNA---LPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL 399
V D P+ P+ PV I I +V ++ GL P I + N+ +
Sbjct: 413 VNDSPETPI-PDVNEETPVFRNIYISNVLCRGAGRAVYFNGLPEMPLKNIFIKNMTV 468
>gi|189466414|ref|ZP_03015199.1| hypothetical protein BACINT_02789 [Bacteroides intestinalis DSM
17393]
gi|189434678|gb|EDV03663.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 467
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/389 (30%), Positives = 184/389 (47%), Gaps = 55/389 (14%)
Query: 41 ITDFGGVGDGKTLNT-KAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
ITDFG D +A +AI + GGT++ VP G + TG L S++ ++
Sbjct: 50 ITDFGAKPDTPDAPCHEAINQAI--VTCCLNGGGTVV-VPKGTFYTGPITLKSNVNFHVE 106
Query: 100 KGAVIK-ATQDTWNWP-LIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
+GAV++ +T + +P +I P I+ G ++ ITG+ GTIDGQ
Sbjct: 107 EGAVLRFSTDQSLYFPGVITRWEGIDCYNAHP------LIYAYGETNIAITGK-GTIDGQ 159
Query: 158 GA--IWWNM-------W-----------RQRTLPF-----------------TRPNLIEF 180
G+ WW M W R+R L + RP LI
Sbjct: 160 GSNETWWPMCGAPRYGWKEGMVAQRNGGRERLLMYGETSTPIYKRVMTPEDGLRPQLINL 219
Query: 181 MNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIED 240
+ +++I +V NSPFW IHP++C ++ +R V + PN DG DP+S NV IE+
Sbjct: 220 YSCNTVLIEDVTLLNSPFWVIHPLFCESLTVRGVYVYNRG--PNGDGCDPESCKNVLIEN 277
Query: 241 SYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAE 300
TGDD +A+KSG ++ G +G PS I +R G+ +GSE SGG N+ E
Sbjct: 278 CTFDTGDDCIAIKSGRNQDGRKWGIPSENIIVRGCYMKKGHGGVVIGSEISGGYRNLYVE 337
Query: 301 HINLYNVGVG--IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNA 358
+ + + + I +KT+ RGG I N+ V +V + R+ + + ++ + N
Sbjct: 338 NCKMDSPDLDRVIRIKTSTCRGGLIENVFVRNVTVGQCREAV-LRINLQYENRENCNRGF 396
Query: 359 LPVVNGITIKDVWGTKVQQSGLIQGLKNS 387
P V + +K+V K + LI GL ++
Sbjct: 397 TPTVRNVHLKNVTCEKSKLGVLIIGLDDN 425
>gi|380693857|ref|ZP_09858716.1| exo-poly-alpha-D-galacturonosidase [Bacteroides faecis MAJ27]
Length = 525
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 185/417 (44%), Gaps = 61/417 (14%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+++I DFG + DG TLNT+A AI + + GG + +P G++LTG L S++ LY
Sbjct: 58 EVNIRDFGALSDGVTLNTEAINNAI---KTVSSKGGGKVIIPEGLWLTGPVVLLSNVNLY 114
Query: 98 LAKGAVIKATQDTWNWPLI-------------APLPSY--------GRGRERPGGRYMSF 136
K A+I + DT +P+I +P+ + G G G
Sbjct: 115 TEKNALIVFSSDTSLYPIIEASFEGLDTKRCQSPISAMNAENIAITGSGVFDGAGDRWRP 174
Query: 137 IHGDGL-----QDVVITGENGTIDGQGAIWW---------------NMWRQRTL------ 170
+ D + +++V +G G +D G +W+ N ++
Sbjct: 175 VKKDKMTERQWKNLVSSG--GKVDENGKVWYPDAGALKASVLMTGQNSGQKEITDEEWIY 232
Query: 171 --PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGI 228
+ RP ++ + S+ I++ V F+NSP W IHP+ C ++ + V + P S N D +
Sbjct: 233 MKSWLRPVMLSIVKSKRILLEGVTFKNSPGWCIHPLSCESLTLNDVKVFNPWYSQNGDAL 292
Query: 229 DPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 288
D +S NV + + + GDD + +KSG DE G G P + I+ T G +GS
Sbjct: 293 DVESCKNVLVTNCFFDAGDDAICLKSGKDEDGRRRGEPCENVIIKNNTVLHGHGGFVIGS 352
Query: 289 ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM---ENARKGIKIAGD 345
E SGGV NV + VG+ K+ GRGG + NI + ++ M N + +
Sbjct: 353 EMSGGVRNVYVSGCSFVGTDVGLRFKSTRGRGGVVENIFIDNINMIDIPNDALTMDLYYA 412
Query: 346 VGDHPDDKFNPNA---LPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL 399
V D P+ P+ PV I I +V ++ GL P I + N+ +
Sbjct: 413 VNDSPETPI-PDVNEETPVFRNIYISNVLCRGAGRAVYFNGLPEMPLKNILIKNMTV 468
>gi|224538252|ref|ZP_03678791.1| hypothetical protein BACCELL_03143 [Bacteroides cellulosilyticus
DSM 14838]
gi|423221595|ref|ZP_17208065.1| hypothetical protein HMPREF1062_00251 [Bacteroides cellulosilyticus
CL02T12C19]
gi|224520112|gb|EEF89217.1| hypothetical protein BACCELL_03143 [Bacteroides cellulosilyticus
DSM 14838]
gi|392645922|gb|EIY39642.1| hypothetical protein HMPREF1062_00251 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 534
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 121/460 (26%), Positives = 188/460 (40%), Gaps = 82/460 (17%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
++I DFG GDG LNTKA +AI + + GG + +P G++LTG L S++ LY
Sbjct: 58 VNIVDFGAKGDGIVLNTKAINDAI---KAVNAKGGGKVIIPEGLWLTGPIELLSNVNLYT 114
Query: 99 AKGAVIKATQDTWNWPLI-------------APLPSYGRGRERPGGRYMSFIHGDGLQDV 145
A++ T D +P+I +P+ ++ G + GD + V
Sbjct: 115 EMNALVLFTDDFEAYPIIKTSFEGLDTRRCQSPISAWNAENIAITGHGVFDGSGDSWRPV 174
Query: 146 V-----------ITGENGTIDGQGAIW---------------------------WNMWRQ 167
+ G +D G+IW WN R
Sbjct: 175 KKGKLTAGQWSSLVSSGGVVDASGSIWYPTAGALKGAMATKDFNNPEGINTDEEWNEIR- 233
Query: 168 RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDG 227
P+ RP L+ + S+ +++ V F+NSP W +HP+ C ++ I V + P S N D
Sbjct: 234 ---PWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITIHNVKVFNPWYSQNGDA 290
Query: 228 IDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVG 287
+D +S N I ++ GDD + +KSG DE G G P + ++ T G VG
Sbjct: 291 LDLESCKNALIVNNIFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGFVVG 350
Query: 288 SETSGGVENVLAEHINLYNVGVGIHVKTNIGRGG-----FIRNITVSDVYMENARKGIKI 342
SE SGGV+NV VG+ K+ GRGG +I NI + D+ E +
Sbjct: 351 SEMSGGVKNVYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNINMIDIPHEALLFDLFY 410
Query: 343 AGD-VGDHPDDKFN----------PNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTG 391
G G+ +D P I I +V V ++ GL P
Sbjct: 411 GGKGAGEETEDDLEGRMKSSVPPVTEKTPAFRDIHITNVTCRSVGRAMFFNGLPEMPIRN 470
Query: 392 ICLSNINL----QGVAGPTSPPLKCS----DVSGSAYQVK 423
+ + ++ + QG+ + + D G+A QVK
Sbjct: 471 VHVKDVVITDAKQGIVISQAENVSIENVKIDTKGTALQVK 510
>gi|329962420|ref|ZP_08300420.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328529976|gb|EGF56864.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 532
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 154/350 (44%), Gaps = 68/350 (19%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
++I DFGG DG LNT+A +AI + + GG + +P G++LTG L S++ LY
Sbjct: 58 VNIVDFGGKNDGVALNTQAINDAI---KAVNAHGGGKVIIPEGIWLTGPIELLSNVNLYT 114
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
K A++ T D +P+I S+ R R S I +++ ITG G DG G
Sbjct: 115 EKNALVVFTDDFSAYPIIKT--SFEGLDTR---RCQSPISARNAENIAITGY-GVFDGSG 168
Query: 159 ----------------------------AIW---------------------------WN 163
+IW WN
Sbjct: 169 DSWRPVKKGKLTASQWEALVKSGGVVDKSIWYPTAGALKGALACKNFNNPEGIDTDEEWN 228
Query: 164 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 223
R P+ RP L+ + S+ +++ V F+NSP W +HP+ C ++ I V + P S
Sbjct: 229 EIR----PWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINNVKVFNPWYSQ 284
Query: 224 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 283
N D +D +S N I ++ GDD + +KSG DE G G P + ++ T G
Sbjct: 285 NGDALDLESCKNALIINNIFDAGDDAICIKSGKDEDGRRRGEPCQNVVVKDNTVLHGHGG 344
Query: 284 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
VGSE SGGV+N+ VG+ K+ GRGG + I + +++M
Sbjct: 345 FVVGSEMSGGVKNIYVSDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHM 394
>gi|402307601|ref|ZP_10826623.1| pectate lyase family protein [Prevotella sp. MSX73]
gi|400378313|gb|EJP31171.1| pectate lyase family protein [Prevotella sp. MSX73]
Length = 471
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 117/397 (29%), Positives = 172/397 (43%), Gaps = 43/397 (10%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYL-TGSFNLTSHMTLY 97
I + G DGKT A +A+ + R+ GG + + GV+L G +L + L
Sbjct: 57 IDLARLGAKTDGKTDARPAMIKAL---RQARKWGGARIVLSGGVFLMCGPIHLVDGVCLD 113
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPG-GRYMSFIHGDGLQDVVITGENGTIDG 156
+ +GA ++ + + + LP+ E Y I+G L DV I G+ G IDG
Sbjct: 114 IREGATLRFSPEPRFY-----LPTVATSWEGTFLNNYSPMIYGRNLHDVSIVGK-GLIDG 167
Query: 157 QGAIWWNMWRQRTLP------------------------FTRPNLIEFMNSRSIIISNVI 192
A + WR R + RP LI+ R++ I V
Sbjct: 168 NCAATFATWRARQKEGQTLSRRMNHEERPLAERNFGEGHWLRPQLIQLFGCRNVTIEGVK 227
Query: 193 FQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAV 252
NSPFW IH + NV+ R + A N DGIDP+SS NV IED GDD VA+
Sbjct: 228 IINSPFWCIHLLQSENVICR--GLRYDAKLVNNDGIDPESSRNVLIEDVSFDNGDDNVAI 285
Query: 253 KSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYN-VGVGI 311
KSG D G + HPS I IRR + +GSE SGGV NV E + G+
Sbjct: 286 KSGRDNDGWTHAHPSENIIIRRCRFKG-LHAVVIGSEMSGGVRNVFVEDCDFAGYCKRGL 344
Query: 312 HVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVW 371
++KTN RGG+++NI + D + I + + + V + + V
Sbjct: 345 YIKTNPDRGGYVKNIYMKDCRFDEVEDLIYV---TSMYAGEGLGSRHFSEVEHLLVDGVS 401
Query: 372 GTKVQQSGLI-QGLKNSPFTGICLSNINLQGVAGPTS 407
K + +G++ QG K P + + + + V S
Sbjct: 402 CRKARAAGIVLQGTKAKPIRDVTIRRVEIGEVKNAVS 438
>gi|399032135|ref|ZP_10731774.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398069546|gb|EJL60896.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 449
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 113/394 (28%), Positives = 197/394 (50%), Gaps = 50/394 (12%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVY-LTGSFNLTSHMTL 96
++++ G GD + + F +A+ + + +GGT++ VP G+Y L G + S++ L
Sbjct: 43 QVNVAKLGAKGDSISNSKPFFDKAMALCK--KNNGGTIV-VPKGIYFLNGPIHFVSNVNL 99
Query: 97 YLAKGAVIKATQDTWNW-PLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTID 155
+ KGA IK + + N+ P++ L S+ Y I+ ++ I+GE GTID
Sbjct: 100 KIEKGAKIKFSDNPENYLPMV--LTSWEGTMIY---NYSPLIYAYDCTNIAISGE-GTID 153
Query: 156 GQGAIWWNMWRQR--------------TLP----------FTRPNLIEFMNSRSIIISNV 191
G+G W ++ + ++P F RP +I+F ++I++ N+
Sbjct: 154 GEGGKTWKSFKDKEGKGKELSREMNHNSIPINERKFGTGYFLRPQMIQFFKCKNILVENI 213
Query: 192 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 251
+NSPFW +H + ++ +R ++ + + N DGIDP+ + +V IE+ + GDD +A
Sbjct: 214 RIENSPFWCLHLLKSESITVRGISY--KSLNYNNDGIDPEYAKDVLIENVTFNNGDDNIA 271
Query: 252 VKSGWDEYGIA-YGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGV- 309
+K+G D G A PS I IR G+ +GSE S GV+NV E N VG
Sbjct: 272 IKAGRDHEGRANSATPSENIIIRNCNFKG-LHGVVIGSEMSAGVQNVYVE--NCKTVGYL 328
Query: 310 --GIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITI 367
GI++KTN RGGFI+N+ V ++ ++ + I + H + K ++ ++
Sbjct: 329 KRGIYLKTNADRGGFIKNVFVRNIQLDEVEDCLYITANY--HGEGK---GFQSEISNVSF 383
Query: 368 KDVWGTKVQQSGL-IQGLKNSPFTGICLSNINLQ 400
D+ K +G+ IQG + I L+NI ++
Sbjct: 384 SDISCNKASATGIVIQGFPDKKIKNISLNNIEIK 417
>gi|427387085|ref|ZP_18883141.1| hypothetical protein HMPREF9447_04174 [Bacteroides oleiciplenus YIT
12058]
gi|425725690|gb|EKU88559.1| hypothetical protein HMPREF9447_04174 [Bacteroides oleiciplenus YIT
12058]
Length = 534
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 154/356 (43%), Gaps = 68/356 (19%)
Query: 34 YRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSH 93
+ N +SI +FG GDG LNTKA +AI + + GG + +P G++LTG L S+
Sbjct: 53 FPNYTVSIVEFGAKGDGIMLNTKAINDAI---KAVNAKGGGKVVIPEGLWLTGPIELLSN 109
Query: 94 MTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGEN-- 151
+ LY A+I T D +P+I S+ R R S I +++ ITG
Sbjct: 110 VNLYTEMNALILFTDDFEAYPIIKT--SFEGLDTR---RCQSPISAWNAENIAITGHGVF 164
Query: 152 ---------------------------GTIDGQGAIW----------------------- 161
G +D G+IW
Sbjct: 165 DGSGDSWRPVKKGKLTSGQWSSLVKSGGVVDESGSIWYPTAGALKGAMATKDFNNPEGIE 224
Query: 162 ----WNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL 217
WN R P+ RP L+ + S+ +++ V F+NSP W +HP+ C ++ I V +
Sbjct: 225 TDEEWNEIR----PWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITIHNVKVF 280
Query: 218 APADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTG 277
P S N D +D +S N I ++ GDD + +KSG DE G G P + ++ T
Sbjct: 281 NPWYSQNGDALDLESCKNALIINNIFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTV 340
Query: 278 SSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
G VGSE SGGV+NV VG+ K+ GRGG + I + ++ M
Sbjct: 341 LHGHGGFVVGSEMSGGVKNVYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNINM 396
>gi|255645539|gb|ACU23264.1| unknown [Glycine max]
Length = 126
Score = 145 bits (366), Expect = 4e-32, Method: Composition-based stats.
Identities = 72/106 (67%), Positives = 83/106 (78%), Gaps = 4/106 (3%)
Query: 7 TLSILLSYFNCFSL----ASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAI 62
TL++L+ + C+ L +CS IV + +R D ISIT+FGGVGDG+TLNTKAFREAI
Sbjct: 7 TLALLVCFSCCWLLVLGEGETASCSNIVALGHRTDNISITEFGGVGDGRTLNTKAFREAI 66
Query: 63 YRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQ 108
YR+QHL R GGTLLYVPPGVYLT FNLTSHMTLYLA GAVI ATQ
Sbjct: 67 YRVQHLPREGGTLLYVPPGVYLTEPFNLTSHMTLYLAAGAVIMATQ 112
>gi|451341085|ref|ZP_21911561.1| Polygalacturonase [Amycolatopsis azurea DSM 43854]
gi|449416100|gb|EMD21877.1| Polygalacturonase [Amycolatopsis azurea DSM 43854]
Length = 451
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 175/388 (45%), Gaps = 38/388 (9%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
S+ DFG GDGKT N+ A ++ I + GG + VP G ++TG+ L S++ L+L
Sbjct: 55 FSVLDFGAKGDGKTDNSAAIKKTI---ETANARGGGHVVVPKGTFVTGAVYLKSNVDLHL 111
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
GAV+K D +P + L Y G E M + + + D+ +TG GT+D
Sbjct: 112 DAGAVLKFGSDASKFPNV--LTRY-EGIECVNRSPMIYAYKE--SDIAVTGR-GTLDAAD 165
Query: 159 AIWWNMWR----------------QRTLPFT----RPNLIEFMNSRSIIISNVIFQNSPF 198
WN + +R +P + R +E +++I V +N F
Sbjct: 166 TASWNKGKDREYLESLVAKGVPPEKRIVPGSGHAMRSTFVEPYACDTVLIQGVTLKNPVF 225
Query: 199 WNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDE 258
W +HP C NV I V A NTD DP+S +V I +S++ DD +A+K+G D
Sbjct: 226 WQLHPTLCRNVTIDGVRTDASTAHSNTDACDPESCDHVVIVNSHLGAHDDNIALKAGRDA 285
Query: 259 YGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLY-NVGVGIHVKTNI 317
G G P I + + I GSE +GG+ +V A + + ++VK+N
Sbjct: 286 DGRRVGVPCRNIVVANCVMDGNWGAITCGSEQTGGISDVYAYKLTVTGETKYALYVKSNT 345
Query: 318 GRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNA-LPVVNGITIKDVWGTKVQ 376
RGGF N+ + V AR + PD A +P TI D TK
Sbjct: 346 LRGGFTENVNLDRVSGTFARSFAYVL------PDYNGQTGAYVPRFGPFTISDSASTKCG 399
Query: 377 QSGL-IQGLKNSPFTGICLSNINLQGVA 403
Q+ ++GL NS G+ +S+ GVA
Sbjct: 400 QAAFDVRGLPNSHVRGLRVSDCRFDGVA 427
>gi|423301929|ref|ZP_17279952.1| hypothetical protein HMPREF1057_03093 [Bacteroides finegoldii
CL09T03C10]
gi|408471020|gb|EKJ89552.1| hypothetical protein HMPREF1057_03093 [Bacteroides finegoldii
CL09T03C10]
Length = 546
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 150/344 (43%), Gaps = 70/344 (20%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+++I FG GDG LNTKA +AI + + + GG + +P G++LTG L S++ LY
Sbjct: 58 EVNIEKFGAKGDGLFLNTKAINDAI---KDVNQHGGGKVIIPEGIWLTGPIELLSNVNLY 114
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
+ A++ T D +P+IA S+ R R S I +++ ITG GT DG
Sbjct: 115 TERNALVLFTGDFEAYPIIAT--SFEGLETR---RCQSPISARNAENIAITG-YGTFDGN 168
Query: 158 G------------------------------AIW-------------------------- 161
G IW
Sbjct: 169 GDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTPGSLKGAMACKDFNVPEGINTDE 228
Query: 162 -WNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA 220
WN R P+ RP L+ S+ I++ V F+NSP W +HP+ C + + + ++ P
Sbjct: 229 EWNEIR----PWLRPVLLSIAKSKKILLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPW 284
Query: 221 DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP 280
S N D ID +S N I +S GDD + +KSG DE G G P + ++ T
Sbjct: 285 YSQNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHG 344
Query: 281 FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 324
G VGSE SGGV+N+ E VG+ K+ GRGG +
Sbjct: 345 HGGFVVGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 388
>gi|357386032|ref|YP_004900756.1| Polygalacturonase [Pelagibacterium halotolerans B2]
gi|351594669|gb|AEQ53006.1| Polygalacturonase [Pelagibacterium halotolerans B2]
Length = 508
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 170/349 (48%), Gaps = 28/349 (8%)
Query: 73 GTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRE----- 127
G LYVPPG++ TG L S + +++ +GA IK D + ++ + GR +
Sbjct: 115 GATLYVPPGIWRTGPVFLKSGLFVHVPEGATIKGVADRGAYRMLEAFGADGRQQASWEGV 174
Query: 128 --RPGGRYMSFIHGDGLQDVVITGENGTIDGQGAI--WWNMWRQRTLPFTRPNLIEFMNS 183
R G ++ I DG V I G+ G IDG GA WW ++ RP +
Sbjct: 175 PARCYGSLLTAIDADG---VTIAGK-GVIDGAGAEGDWWEWPKETREGARRPRTVFANRC 230
Query: 184 RSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYI 243
+ +S + +NSP W IHP+ C+ V + I P DSPNTDG++P+SS+++ I
Sbjct: 231 TQLKMSGLTVRNSPSWTIHPLDCAGAVFADLAIENPPDSPNTDGLNPESSTDIEIVGVRF 290
Query: 244 STGDDLVAVKSG--WDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEH 301
S GDD +A+K+G W + + P+ +++R G+ +GSE SG V +V
Sbjct: 291 SVGDDCIAIKAGKIWPDGTVPA--PTRNVSVRHCLMERGHGGVVIGSEMSGSVTDVTVAF 348
Query: 302 INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD---DKFNPNA 358
+ + G+ +KT GRGG + I +SD M+ + + I PD D A
Sbjct: 349 CTMRDTDRGLRIKTRRGRGGAVARIVLSDCLMDGVKTPLSINSHYFCDPDGRSDAVQNRA 408
Query: 359 LPVVNGIT--IKDV--WGTKVQQS----GLIQGLKNSPFTGICLSNINL 399
V+ T I D+ T+V+ + + GL +P +G+ ++++++
Sbjct: 409 PAPVSAATPKIGDIRFERTEVKNAHHALAYVLGLAEAPVSGLTIADVSV 457
>gi|423216971|ref|ZP_17203467.1| hypothetical protein HMPREF1061_00240 [Bacteroides caccae
CL03T12C61]
gi|392629501|gb|EIY23508.1| hypothetical protein HMPREF1061_00240 [Bacteroides caccae
CL03T12C61]
Length = 539
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 150/340 (44%), Gaps = 62/340 (18%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+++I FG GDG LNTKA +AI + + + GG + +P G++LTG L S++ LY
Sbjct: 59 EVNIEKFGAKGDGLFLNTKAINDAI---KDVNQRGGGKVIIPEGIWLTGPIELLSNVNLY 115
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
+ A++ T D +P+I S+ R R S I +++ ITG GT DG
Sbjct: 116 TEQNALVLFTGDFEAYPIIDT--SFEGLETR---RCQSPISARNAENIAITGY-GTFDGN 169
Query: 158 GAIW---------WNMWRQ----------------------------------------- 167
G W + W++
Sbjct: 170 GDCWRPVKKEKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLKGAMACKDFNVPEGINTDE 229
Query: 168 ---RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 224
P+ RP L+ + S+ +++ V F+NSP W +HP+ C + + + ++ P S N
Sbjct: 230 EWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQN 289
Query: 225 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 284
D ID +S N I +S GDD + +KSG DE G G P + ++ T G
Sbjct: 290 GDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGF 349
Query: 285 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 324
VGSE SGGV+N+ E VG+ K+ GRGG +
Sbjct: 350 VVGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|238006852|gb|ACR34461.1| unknown [Zea mays]
Length = 187
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 77/121 (63%), Positives = 88/121 (72%), Gaps = 1/121 (0%)
Query: 31 PMRYRNDKISITDFGGVGDGKTLNT-KAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFN 89
P R +S+ FG GDG+TLNT R + GGTLLYVPPGV+LTG FN
Sbjct: 36 PAPRRGAWMSVASFGARGDGQTLNTGAFARAVARIARRRGARGGTLLYVPPGVWLTGPFN 95
Query: 90 LTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITG 149
LTSHMTL+LA+GA+++ATQDT +WPLI PLPSYGRGRE PGGRYMS IHG GLQDV ITG
Sbjct: 96 LTSHMTLFLARGAIVRATQDTSSWPLIDPLPSYGRGRELPGGRYMSLIHGHGLQDVFITG 155
Query: 150 E 150
Sbjct: 156 S 156
>gi|340348164|ref|ZP_08671257.1| glycoside hydrolase [Prevotella dentalis DSM 3688]
gi|433652999|ref|YP_007296853.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
gi|339607813|gb|EGQ12738.1| glycoside hydrolase [Prevotella dentalis DSM 3688]
gi|433303532|gb|AGB29347.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
Length = 857
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 120/409 (29%), Positives = 182/409 (44%), Gaps = 55/409 (13%)
Query: 38 KISITDFGG-VGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTL 96
+ ITDFG V N KA AI R GG + VP G +LTG+ L S + L
Sbjct: 44 EYRITDFGASVRATAARNQKAINRAI---ATCSRQGGGRVVVPRGEWLTGAIRLQSRVNL 100
Query: 97 YLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDG 156
+ +GA ++ D +PL+ + G E Y I+ DV +TG GT+DG
Sbjct: 101 VVEEGATLEFAFDPALYPLVK---TSWEGLE--CWNYSPCIYAYQATDVGLTGR-GTVDG 154
Query: 157 QGA--IWWNMW--------------------RQRTLPFT-----------------RPNL 177
G+ WW M R + L RP L
Sbjct: 155 NGSRDTWWPMCGAAKYGFVAGQTKEAQSLGARAQLLKMAEDGVPADERRFGMGRGLRPQL 214
Query: 178 IEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVC 237
+ F I++ + NSPFW IHP+ +N+ + VT+ D PN DG DP++ SNV
Sbjct: 215 VNFNACDGILVEGLTLANSPFWVIHPLLSTNITVDGVTVTN--DGPNGDGCDPEACSNVL 272
Query: 238 IEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENV 297
I++ TGDD +A+KSG + G + PS I IR G+ +GSE SGG NV
Sbjct: 273 IQNCTFDTGDDCIAIKSGRNNDGRLWNRPSENIIIRHCKMKDGHGGVVIGSEISGGCRNV 332
Query: 298 LAE--HINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFN 355
AE H++ ++ + +KTN RGG I NI + +V + + + + ++ P ++
Sbjct: 333 FAEDCHMDSPHLDRVLRIKTNNCRGGVIENINMRNVTVGQCNEAV-LRINLDYEPREQCY 391
Query: 356 PNALPVVNGITIKDVWGTKVQQSGLIQGLKN-SPFTGICLSNINLQGVA 403
P V + +++V + + I GL N + + + N GV+
Sbjct: 392 RGFEPTVRRVYMENVTSRESKYGVQIIGLNNIENVSDVTVKNCRFDGVS 440
>gi|357054504|ref|ZP_09115588.1| hypothetical protein HMPREF9467_02560 [Clostridium clostridioforme
2_1_49FAA]
gi|355384476|gb|EHG31541.1| hypothetical protein HMPREF9467_02560 [Clostridium clostridioforme
2_1_49FAA]
Length = 522
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 149/311 (47%), Gaps = 21/311 (6%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+ + DFG GDG +T + AI R + +P G Y S L ++ + L
Sbjct: 82 LDVRDFGAKGDGIQDDTLFIQAAIMACPEKSR-----VLIPAGTYRIVSLFLKDNVNIEL 136
Query: 99 AKGAVIKATQDTWNWPLIAPL-PSYGRGRE--------RPGGRYMSFIHGDGLQDVVITG 149
A+GAV+ A D +P+ + SY E P + I G +++ VI G
Sbjct: 137 AEGAVLSAYTDRTRFPVFQGMIQSYDEQGEYNLGTWEGNPLPMFTGIITGVNVKEAVIYG 196
Query: 150 ENGTIDGQ-GAIWWNMWRQRTLPFT--RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYC 206
+ G IDG G N W + + T RP +I R + + + +NSP WNIHP +
Sbjct: 197 Q-GIIDGNAGTGEGNWWHEPKVIHTACRPRMIFLERCRQVTVQGITVRNSPSWNIHPYFS 255
Query: 207 SNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHP 266
++ + +L+P DSPNTDG+DP+S +V I S GDD +AVKSG G Y P
Sbjct: 256 DHLRFFDLKVLSPKDSPNTDGLDPESCKDVEIAGVCFSVGDDCIAVKSGKIYMGSTYKCP 315
Query: 267 SSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNI 326
S I+IRR + +GSE +GGV+++ + + G+ +KT GRG ++
Sbjct: 316 SKNISIRRCCMRDGHGSVTIGSEMAGGVKDLTVKDCMFLHTDRGLRIKTRRGRG---KDA 372
Query: 327 TVSDVYMENAR 337
V + E+ R
Sbjct: 373 VVDKIVFEHIR 383
>gi|317505480|ref|ZP_07963398.1| polygalacturonase [Prevotella salivae DSM 15606]
gi|315663393|gb|EFV03142.1| polygalacturonase [Prevotella salivae DSM 15606]
Length = 494
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 160/339 (47%), Gaps = 52/339 (15%)
Query: 36 NDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMT 95
N+++S+TDFG V DG TLNT+AFR+AI ++ L GG L VP G+YLTG +L ++
Sbjct: 67 NNQVSLTDFGAVPDGITLNTEAFRKAISKLTKL---GGGHLIVPAGIYLTGPISLKDNID 123
Query: 96 LYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTID 155
++L + A+I + + ++ P + +S I ++ ITGE GTID
Sbjct: 124 IHLERNALILFSPNKKDF--------LKATDNEPQPKVVSGITASKRTNISITGE-GTID 174
Query: 156 GQGAIW------------WNMWRQRT----------LPFT-----------------RPN 176
G G W WN ++ PF R +
Sbjct: 175 GNGQWWRPVKRVKMSDVEWNQYKAMGGTITPKGDLWYPFNLKTQENIAPNASEQEKMRAH 234
Query: 177 LIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNV 236
LI +++I V QNSP ++I P C+NV++ +T+ P ++ N DGID + SNV
Sbjct: 235 LIRITECNNVLIQGVTIQNSPRFHIVPQRCNNVIVDGITVRCPWNAQNGDGIDVGNCSNV 294
Query: 237 CIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVEN 296
I +S GDD + +KSG E I I+ T G +GSE GG++N
Sbjct: 295 LIVNSTFDVGDDAICMKSGA-EKADQTNRSCVNINIQNNTVYHGHGGFVIGSEVIGGMKN 353
Query: 297 VLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 335
+ + G+ K+ +GRGG +I +++ YM N
Sbjct: 354 IYVNNNFFSGTDTGLRFKSAVGRGGKTEDIFINNCYMNN 392
>gi|153807509|ref|ZP_01960177.1| hypothetical protein BACCAC_01789 [Bacteroides caccae ATCC 43185]
gi|149129871|gb|EDM21083.1| polygalacturonase (pectinase) [Bacteroides caccae ATCC 43185]
Length = 539
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 150/340 (44%), Gaps = 62/340 (18%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+++I FG GDG LNTKA +AI + + + GG + +P G++LTG L S++ LY
Sbjct: 59 EVNIEKFGAKGDGLFLNTKAINDAI---KDVNQRGGGKVIIPEGIWLTGPIELLSNVNLY 115
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
+ A++ T D +P+I S+ R R S I +++ +TG GT DG
Sbjct: 116 TEQNALVLFTGDFEAYPIIDT--SFEGLETR---RCQSPISARNAENIAVTGY-GTFDGN 169
Query: 158 GAIW---------WNMWRQ----------------------------------------- 167
G W + W++
Sbjct: 170 GDCWRPVKKEKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLKGAMACKDFNVPEGINTDE 229
Query: 168 ---RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 224
P+ RP L+ + S+ +++ V F+NSP W +HP+ C + + + ++ P S N
Sbjct: 230 EWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQN 289
Query: 225 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 284
D ID +S N I +S GDD + +KSG DE G G P + ++ T G
Sbjct: 290 GDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGF 349
Query: 285 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 324
VGSE SGGV+N+ E VG+ K+ GRGG +
Sbjct: 350 VVGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|388258052|ref|ZP_10135230.1| glycoside hydrolase family 28 [Cellvibrio sp. BR]
gi|387938173|gb|EIK44726.1| glycoside hydrolase family 28 [Cellvibrio sp. BR]
Length = 513
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 119/416 (28%), Positives = 192/416 (46%), Gaps = 74/416 (17%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+I+ +DFG GDG T +T A ++AI + L + PG YLTGS L S+M L
Sbjct: 77 EINASDFGAKGDGTTDDTNALQKAI----DATAAKKATLVLQPGTYLTGSLFLKSNMALR 132
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYM----SFIHGDGLQDVVITGENGT 153
L KG + Q+ + SY R + R G + + ++ DV I GE GT
Sbjct: 133 LDKGVTLTGKQN---------IESYPRQKTRIAGIEIVWPSALLNVYEQADVHIYGE-GT 182
Query: 154 IDGQGAIWWN-MWRQRTL------------PFTRPNLIEFMNSRSIIISN-VIFQNSPFW 199
IDG G ++W W +R + RP LI+ NS+ I + + + + FW
Sbjct: 183 IDGNGMVFWQTFWDKRNVYEGKGLRWAADYDAERPRLIQVYNSKRIELGGGLHMKRAGFW 242
Query: 200 NIHPVYCSNVVIRYVTILAPADS--PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWD 257
+ VY ++V + V I +D P+TDGID DSS +V +E + I DD + +K+G D
Sbjct: 243 TLQIVYSNDVKVSNVVIRNNSDGKGPSTDGIDIDSSHHVLVEKADIDVNDDALCLKAGRD 302
Query: 258 EYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGV------GI 311
G+ P+ + IR +G+ GSETSG + N I++YN+ V GI
Sbjct: 303 ADGLRVNRPTEHVVIRDSIIRHAEAGVTFGSETSGSIRN-----IDVYNLDVQGPVYSGI 357
Query: 312 HVKTNIGRGGFIRNITVSDVYMENARKGIKI----------------AGDVGDH------ 349
K+ RGG + +I + D+ ++NA +++ +V +H
Sbjct: 358 FFKSAHVRGGTVSDIRIRDMKVQNAEAAVRVDLNWLPVYSYPVIPPGIKNVPEHWKILAT 417
Query: 350 --PDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 403
P +K +P + I I ++ + + L+QG +P + SN+++ A
Sbjct: 418 PVPKEK----GMPKLRDIHISNI-KAEANAAFLMQGYAEAPLQNVHFSNMHITAAA 468
>gi|189468045|ref|ZP_03016830.1| hypothetical protein BACINT_04439 [Bacteroides intestinalis DSM
17393]
gi|189436309|gb|EDV05294.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 534
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 152/351 (43%), Gaps = 68/351 (19%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
++I DFG GDG LNTKA +AI + + GG + +P G++LTG L S++ LY
Sbjct: 58 VNIIDFGAKGDGIVLNTKAINDAI---KAVNAKGGGKVVIPGGLWLTGPIELLSNVNLYT 114
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGEN------- 151
A+I T D +P+I S+ R R S I +++ ITG
Sbjct: 115 EMNALILFTDDFEAYPIIET--SFEGLNTR---RCQSPISAWNAENIAITGNGVFDGSGD 169
Query: 152 ----------------------GTIDGQGAIW---------------------------W 162
G +D G+IW W
Sbjct: 170 SWRPVKKGKLTSSQWNSLVNSGGVVDEAGSIWYPTAGALKGAMATKDFNNPEGIETDEEW 229
Query: 163 NMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS 222
N R P+ RP L+ + S+ +++ V F+NSP W +HP+ C ++ I V + P S
Sbjct: 230 NEIR----PWLRPVLLNIVKSKRVLLEGVTFKNSPSWCLHPLSCEHITIHNVKVFNPWYS 285
Query: 223 PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS 282
N D +D +S N I ++ GDD + +KSG DE G G P + ++ T
Sbjct: 286 QNGDALDLESCKNALIINNIFDAGDDAICIKSGKDEDGRKRGEPCQNVIVKNNTVLHGHG 345
Query: 283 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
G VGSE SGGV+NV VG+ K+ GRGG + I + ++ M
Sbjct: 346 GFVVGSEMSGGVKNVYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNINM 396
>gi|376338084|gb|AFB33587.1| hypothetical protein 2_7803_01, partial [Pinus cembra]
Length = 138
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 67/137 (48%), Positives = 99/137 (72%), Gaps = 1/137 (0%)
Query: 254 SGWDEYGIAYGHPSSGITIRRVTGSS-PFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 312
SGWDEYGI YG PSS I IRRV G + SG+A+GSE SGG++ V A+ + ++N G+
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGQTHTSSGLALGSEMSGGIQGVHAQDLQIFNSRRGLR 60
Query: 313 VKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWG 372
+KT GRGG++R++ +S+V M+N GI G GDHPDD+++PNALP + IT KD+ G
Sbjct: 61 IKTAPGRGGYVRDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPXIQRITFKDIIG 120
Query: 373 TKVQQSGLIQGLKNSPF 389
+++ +G ++G++N+PF
Sbjct: 121 XEIKTAGSVEGIQNAPF 137
>gi|393786780|ref|ZP_10374912.1| hypothetical protein HMPREF1068_01192 [Bacteroides nordii
CL02T12C05]
gi|392658015|gb|EIY51645.1| hypothetical protein HMPREF1068_01192 [Bacteroides nordii
CL02T12C05]
Length = 536
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 145/339 (42%), Gaps = 62/339 (18%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
ISI FG DGK LNTKA EAI + + GG + +P G++LTG L S++ LY
Sbjct: 57 ISIVAFGAQNDGKFLNTKAINEAI---KAVHAKGGGKVVIPEGLWLTGPIELLSNVNLYT 113
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITG--------- 149
+ A+I T D +P+I S+ R R S I +++ ITG
Sbjct: 114 ERNAMILFTDDFEAYPIIET--SFEGLETR---RCQSPISARNAENIAITGYGTFDGSGD 168
Query: 150 --------------------ENGTIDGQGAIWW------------------------NMW 165
G D G IW+ W
Sbjct: 169 SWRPVKRDKLTVSQWSKLVKSGGVTDAAGKIWYPTAGALKGALACKDFNVPEGINTDEEW 228
Query: 166 RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNT 225
+ P+ RP L+ + S+ +++ V F+NSP W +HP+ C ++ I V + P S N
Sbjct: 229 DE-IRPWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINNVKVFNPWYSQNG 287
Query: 226 DGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIA 285
D +D +S N I +S GDD + +KSG DE G G P + ++ T G
Sbjct: 288 DALDLESCKNALIINSLFDAGDDAICIKSGKDEDGRRRGEPCQNVLVKNNTVLHGHGGFV 347
Query: 286 VGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 324
VGSE SGGV+N+ VG+ K+ GRGG +
Sbjct: 348 VGSEMSGGVKNIYVTDCTFLGTDVGLRFKSTRGRGGVVE 386
>gi|266621133|ref|ZP_06114068.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
gi|288867222|gb|EFC99520.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
Length = 517
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 120/430 (27%), Positives = 182/430 (42%), Gaps = 38/430 (8%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
I++ +FG GDG +T + AI ++G L +P G Y S L SH+ L L
Sbjct: 81 INVKEFGAKGDGLQDDTGFIQAAILACP---KNGRVL--IPKGTYRITSLFLKSHIRLEL 135
Query: 99 AKGAVIKATQDTWNWP-LIAPLPSYGRGRE--------RPGGRYMSFIHGDGLQDVVITG 149
GA++ A D + +P L + SY + P + I+G +++VVI G
Sbjct: 136 GAGAILAADTDRFKYPRLPGMIESYDETEDYNLGTWEGNPLPMFAGIINGIEVENVVIYG 195
Query: 150 ENGTIDGQGAI--WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCS 207
E G IDGQ + WW F RP ++ + I + +NSP W +HP +
Sbjct: 196 E-GLIDGQASFENWWKDAGTMRGAF-RPRMVFLERCKDITLQGFYLKNSPAWVLHPYFSQ 253
Query: 208 NVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPS 267
+ + I PADSPNTDG+DP+S +V I + S GDD +AVKSG G Y PS
Sbjct: 254 GLRFLDLDIENPADSPNTDGLDPESCKDVEITGLHFSLGDDCIAVKSGKIYMGRRYKTPS 313
Query: 268 SGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG--GFIRN 325
I IR+ + + VGSE GV+ V + G+ VKT GRG + +
Sbjct: 314 ENIEIRQCLMENGHGAVTVGSEVGAGVKAVRVRDCLFRHTDRGLRVKTRRGRGKDSVLSD 373
Query: 326 ITVSDVYMENARKGIKIAGDVGDHPDDKFN----PNALPV------VNGITIKDVWGTKV 375
I+ + M++ + PD K ALP + ++ D+
Sbjct: 374 ISFQHIVMDHVMTPFVVNSFYFCDPDGKTEYVQCREALPADERTPEIQNLSFTDIKAANC 433
Query: 376 QQSG-LIQGLKNSPFTGICLSNINL-------QGVAGPTSPPLKCSDVSGSAYQVKPWPC 427
+ + GL I L N+++ +GV CS + V C
Sbjct: 434 HAAASFLCGLPEQKIRQIELRNVDISFAEQAREGVPAMMEGVSACSRQGFTVMNVDTLVC 493
Query: 428 SELSSSQQTG 437
++ + Q G
Sbjct: 494 ENVTITGQKG 503
>gi|288925897|ref|ZP_06419827.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
gi|288337321|gb|EFC75677.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
Length = 459
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 172/397 (43%), Gaps = 43/397 (10%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYL-TGSFNLTSHMTLY 97
I + G DGKT A +A+ + R+ GG + + GV+L G +L + L
Sbjct: 45 IDLARLGAKTDGKTDARPAMIKAL---RQARKWGGARIVLSGGVFLMCGPIHLVDGVCLD 101
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPG-GRYMSFIHGDGLQDVVITGENGTIDG 156
+ +GA ++ + + + LP+ E Y I+G L DV I G+ G IDG
Sbjct: 102 IREGATLRFSPEPRFY-----LPTVATSWEGTFLNNYSPMIYGRNLHDVSIVGK-GLIDG 155
Query: 157 QGAIWWNMWRQRTLP------------------------FTRPNLIEFMNSRSIIISNVI 192
A + WR R + RP LI+ R++ I V
Sbjct: 156 NCAATFATWRARQKEGQTLSRRMNHEERPLAERNFGEGHWLRPQLIQLFGCRNVTIEGVK 215
Query: 193 FQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAV 252
NSPFW IH + NV+ R + A N DGIDP+SS NV IED GDD VA+
Sbjct: 216 IINSPFWCIHLLQSENVICR--GLRYDAKLVNNDGIDPESSRNVLIEDVSFDNGDDNVAI 273
Query: 253 KSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYN-VGVGI 311
KSG D G + HPS I IRR + +GSE SGGV NV E + G+
Sbjct: 274 KSGRDNDGWTHAHPSENIIIRRCRFKG-LHAVVIGSEMSGGVRNVFVEDCDFAGYCKRGL 332
Query: 312 HVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVW 371
++KTN RGG+++NI + D + I + + + V + + V
Sbjct: 333 YIKTNPDRGGYVKNIYMKDCRFDEVEDLIYV---TSMYAGEGLGSRHFSEVEHLLVDGVS 389
Query: 372 GTKVQQSGLI-QGLKNSPFTGICLSNINLQGVAGPTS 407
+ + +G++ QG K P + + + + V S
Sbjct: 390 CRRARAAGIVLQGTKAKPIRDVTIRRVEIGEVKNAVS 426
>gi|196228364|ref|ZP_03127231.1| glycoside hydrolase family 28 [Chthoniobacter flavus Ellin428]
gi|196227767|gb|EDY22270.1| glycoside hydrolase family 28 [Chthoniobacter flavus Ellin428]
Length = 456
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/399 (29%), Positives = 177/399 (44%), Gaps = 53/399 (13%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
SITDFG + + T+A +AI +GG + +P GV+LTG+ +L ++ L+LA
Sbjct: 50 SITDFGASPNADS--TEAIAKAITACHA---AGGGRVTIPAGVWLTGAVHLLGNVDLHLA 104
Query: 100 KGAVIKATQDTWNW-PLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
K A ++ + + P++ L Y G E Y ++ ++V ITG GT+DG
Sbjct: 105 KEATLRFVPEPAKYLPVV--LTRY-EGIE--CMNYSPLVYAFEQENVAITGA-GTLDGSA 158
Query: 159 AI--WWNMWRQRTLP-------------------------------FTRPNLIEFMNSRS 185
+ WW W +R F RP+ IE ++
Sbjct: 159 SSQNWW-AWNERAPDKPALQAADRKQLDQQGADGTPVAQRIFGAGHFLRPSFIEPYRCKN 217
Query: 186 IIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYIST 245
++I V NSP W IHP C+NV +R VT+ + N DG DP+S +V IED T
Sbjct: 218 VLIEGVTIVNSPMWEIHPTLCTNVTVRGVTVHSLGT--NNDGCDPESCHDVLIEDCTFQT 275
Query: 246 GDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLY 305
GDD +A+KSG + G G + I IRR T G+ +GSE SGGV NV +
Sbjct: 276 GDDCIAIKSGRNNDGRRVGVAAENIIIRRCTMKDGHGGVTIGSEVSGGVRNVFVSDCQMD 335
Query: 306 N--VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVN 363
+ + K+N RGG I NI VS V + R + D+ + P PV+
Sbjct: 336 SPRLDRAFRFKSNAVRGGEIENIQVSQVKI--GRVARAVLSVEFDYEEGAHGPE-RPVLR 392
Query: 364 GITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 402
+ I++V I + + L + GV
Sbjct: 393 HVRIENVTAESCGSVATITSFPAAVIDDVRLKDCTFHGV 431
>gi|355673331|ref|ZP_09058928.1| hypothetical protein HMPREF9469_01965 [Clostridium citroniae
WAL-17108]
gi|354814797|gb|EHE99396.1| hypothetical protein HMPREF9469_01965 [Clostridium citroniae
WAL-17108]
Length = 532
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 148/314 (47%), Gaps = 22/314 (7%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+++ DFG GDG +T + A+ R + VP G Y S L ++ + L
Sbjct: 93 LNVRDFGAKGDGIQDDTLFIQSAVMACPKDSR-----VLVPAGTYRIVSLFLKDNVKIEL 147
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRER---------PGGRYMSFIHGDGLQDVVITG 149
KGAV+ A D +P++ + G++ P + + + G +++ VI G
Sbjct: 148 EKGAVLSADTDRSRFPVLKGMIKSFDGKDEYNLGTWEGDPLPMFSAVVTGINIENAVIYG 207
Query: 150 ENGTIDGQGAI----WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVY 205
G I+G WW+ ++ F RP ++ + ++I + +NSP WNIHP +
Sbjct: 208 -RGVIEGNAGFGEENWWHDPKRMKTAF-RPRMVFLERCKHVVIQGLTLRNSPSWNIHPYF 265
Query: 206 CSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH 265
++ + +L+P DSPNTDG+DP+S +V I S GDD +AVKSG G Y
Sbjct: 266 SEHLKFLDLRVLSPKDSPNTDGLDPESCRDVEITGICFSVGDDCIAVKSGKIYMGTTYKR 325
Query: 266 PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG--GFI 323
PS I + R + +GSE +GGV+N+ + G+ +KT GRG +
Sbjct: 326 PSEDIVVSRCCMRDGHGSVTIGSEMAGGVKNLTVRDCVFRHTDRGLRIKTRRGRGKNAVV 385
Query: 324 RNITVSDVYMENAR 337
I ++M+ +
Sbjct: 386 DGILFERIHMDQVK 399
>gi|167764884|ref|ZP_02437005.1| hypothetical protein BACSTE_03276 [Bacteroides stercoris ATCC
43183]
gi|167697553|gb|EDS14132.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 550
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 153/350 (43%), Gaps = 68/350 (19%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+SI FG DG TLNTKA +AI + + GG + +P G++LTG L S++ L+
Sbjct: 76 VSILQFGAKSDGTTLNTKAINDAI---KAVNAKGGGKVVIPEGLWLTGPIELLSNVNLHT 132
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
K A++ T D +P++ S+ R R S I +++ ITG G DG G
Sbjct: 133 EKNALVVFTDDFNAYPILET--SFEGLNTR---RCQSPISARNAENIAITGY-GVFDGSG 186
Query: 159 ----------------------------AIW---------------------------WN 163
+IW WN
Sbjct: 187 DSWRPVKKSKLTAGQWDALVKSGGVVDKSIWYPTAGSLKGALACKNFNNPEGIETDEEWN 246
Query: 164 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 223
R P+ RP L+ + S+ +++ V F+NSP W +HP+ C ++ I V + P S
Sbjct: 247 EIR----PWLRPVLLNIVKSKRVLLEGVTFKNSPSWCLHPLSCEHITINQVKVFNPWYSQ 302
Query: 224 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 283
N D +D +S N I ++ GDD + +KSG DE G G P + ++ T G
Sbjct: 303 NGDALDLESCKNALIINNIFDAGDDAICIKSGKDEDGRKRGEPCQNVIVKNNTVLHGHGG 362
Query: 284 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
VGSE SGGV+N+ VG+ K+ GRGG + I + +++M
Sbjct: 363 FVVGSEMSGGVKNIYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHM 412
>gi|218129299|ref|ZP_03458103.1| hypothetical protein BACEGG_00876 [Bacteroides eggerthii DSM 20697]
gi|217988476|gb|EEC54797.1| polygalacturonase (pectinase) [Bacteroides eggerthii DSM 20697]
Length = 533
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 154/350 (44%), Gaps = 68/350 (19%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
++I FG GDG TLNTKA +AI + + GG + +P G++LTG L S++ LY
Sbjct: 58 VNILQFGAKGDGITLNTKAINDAI---KAVNAKGGGKVVIPEGLWLTGPIELLSNVNLYT 114
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
K A+I + D +P++ S+ R R S I +++ ITG G DG G
Sbjct: 115 EKNALIVFSDDFNAYPILET--SFEGLNTR---RCQSPISARNAENIAITGY-GVFDGSG 168
Query: 159 ----------------------------AIW---------------------------WN 163
+IW WN
Sbjct: 169 DSWRPVKKGKLTAGQWDALVKSGGVVDKSIWYPTAGSLKGALACKEFNNPEGIETEEEWN 228
Query: 164 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 223
R P+ RP L+ + S+ +++ V F+NSP W +HP+ C ++ I V + P S
Sbjct: 229 EIR----PWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINQVKVFNPWYSQ 284
Query: 224 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 283
N D +D +S N I ++ GDD + +KSG D+ G G P + ++ T G
Sbjct: 285 NGDALDLESCKNALIINNIFDAGDDAICIKSGKDKDGRERGEPCQNVIVKNNTVLHGHGG 344
Query: 284 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
VGSE SGGV+N+ VG+ K+ GRGG + I + +++M
Sbjct: 345 FVVGSEMSGGVKNIYVADCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHM 394
>gi|332533447|ref|ZP_08409312.1| glycoside hydrolase, family 77 [Pseudoalteromonas haloplanktis
ANT/505]
gi|332037156|gb|EGI73613.1| glycoside hydrolase, family 77 [Pseudoalteromonas haloplanktis
ANT/505]
Length = 474
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 117/436 (26%), Positives = 195/436 (44%), Gaps = 71/436 (16%)
Query: 18 FSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLY 77
+ +A+ + + +VP + + +I DFG +G+ T+A AI + GG +Y
Sbjct: 27 WQMAAQIKSAIVVPT-FPAKQFNIKDFGAKENGQYDCTQAINSAI---EACHAQGGGQVY 82
Query: 78 VPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFI 137
+P G Y TG+ +L S++ L+L+ A++ + D ++ + + + G E G Y I
Sbjct: 83 IPDGTYFTGAIHLLSNVNLHLSDNAIVSFSTDPTHY--LPEVFTRWEGLEMMG--YSPLI 138
Query: 138 HGDGLQDVVITGENGTIDGQG--AIWW-------------------NMWRQR-------- 168
+ +++ ITG+ GT+ G G WW + QR
Sbjct: 139 YAFEQENIAITGK-GTLQGNGDNQTWWPWKGPHKEGHWDLIKDSQGKVLHQREARDQLMV 197
Query: 169 --------------TLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
T + RP I+ ++I+I V +NSPFW ++PV C +V + V
Sbjct: 198 DAEAGVPVSERIYSTGAYLRPPFIQPYKCKNILIQGVTIKNSPFWLMNPVLCKSVTVDKV 257
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
+ PN+DG DP+S +V I++ TGDD +A+KSG + G G PS I I
Sbjct: 258 NF--SSHGPNSDGCDPESCDHVHIKNCVFDTGDDCIAIKSGRNADGRRVGVPSQNIVIEN 315
Query: 275 VTGSSPFSGIAVGSETSGGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVY 332
G+ +GSE SGGV NV ++ + ++ I +KTN RGG I +I + +V
Sbjct: 316 CHMKEGHGGVVIGSEISGGVNNVFVQNCTMDSPHLERAIRIKTNSVRGGLIEHIRIRNVD 375
Query: 333 MENARKGIKI-----AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL-IQGLKN 386
+ + + I GD G +F+ P V I I+++ V + G +
Sbjct: 376 VGTVKNAVVINFYYEEGDAG-----QFD----PTVRDIQIENLHCKNVLSKAFYLNGFER 426
Query: 387 SPFTGICLSNINLQGV 402
+P I N + V
Sbjct: 427 APINDIHFKNCHFDQV 442
>gi|407684232|ref|YP_006799406.1| glycoside hydrolase family protein [Alteromonas macleodii str.
'English Channel 673']
gi|407245843|gb|AFT75029.1| glycoside hydrolase family 28 domain-containing protein
[Alteromonas macleodii str. 'English Channel 673']
Length = 488
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 189/401 (47%), Gaps = 64/401 (15%)
Query: 47 VGDGKTLNTKAFREAIYR-IQHLRRSGGTLLYVPPGVYL-TGSFNLTSHMTLYLAKGAVI 104
V D N F++A++ I + R GG + VP G +L +G +L S++ L++ GA I
Sbjct: 74 VTDFLNENGSDFKQALHAAIDQVARQGGGKVVVPKGDWLCSGPIHLQSNINLHIEAGATI 133
Query: 105 KATQDTWNW-PLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAI--W 161
+ + + ++ P + + G E G Y I+ ++ ITG+ GT+DG A W
Sbjct: 134 RFSTNPDDYKPYVF---TRWEGMELMG--YSPLIYAFEQSNIAITGK-GTLDGSAAKDNW 187
Query: 162 W---NMWRQRTL--------------------------------PFTRPNLIEFMNSRSI 186
W W+ T + RP I+ ++
Sbjct: 188 WPWKGKWKASTWGDDPVENQKYTRDTLQEMVENGTPVSDRVFENNYLRPPFIQPYRCENV 247
Query: 187 IISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTG 246
+I V SPFW ++PV C NV + + + PN+DG DP+S +NV I + TG
Sbjct: 248 LIEGVTILRSPFWLVNPVLCKNVTVN--DVYCKSFGPNSDGCDPESCTNVLISNCTFDTG 305
Query: 247 DDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLY- 305
DD +A+KSG + G P S I I + G+ +GSE SGGVEN+ A+H +
Sbjct: 306 DDCIAIKSGRNADGRRVNVPCSNIVIEHCEMKAGHGGVVIGSEISGGVENLYAQHCTMSS 365
Query: 306 -NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-----AGDVGDHPDDKFNPNAL 359
++ GI +KTN RGG ++N+ ++ + + + + GD G+ P
Sbjct: 366 PDLDRGIRIKTNSIRGGHLKNLNYRNIDIGTVKDAVVVNFFYEEGDAGNFP--------- 416
Query: 360 PVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 400
P++ ITI+++ ++ +++G ++P +G+ L+NI ++
Sbjct: 417 PLLEDITIENLNVASANRAFVLRGYDHTPISGLTLNNITIK 457
>gi|317475267|ref|ZP_07934533.1| exo-poly-alpha-D-galacturonosidase [Bacteroides eggerthii
1_2_48FAA]
gi|316908521|gb|EFV30209.1| exo-poly-alpha-D-galacturonosidase [Bacteroides eggerthii
1_2_48FAA]
Length = 533
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 154/350 (44%), Gaps = 68/350 (19%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
++I FG GDG TLNTKA +AI + + GG + +P G++LTG L S++ LY
Sbjct: 58 VNILQFGAKGDGITLNTKAINDAI---KAVNAKGGGKVVIPEGLWLTGPIELLSNVNLYT 114
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
K A+I + D +P++ S+ R R S I +++ ITG G DG G
Sbjct: 115 EKNALIVFSDDFNAYPILET--SFEGLNTR---RCQSPISARNAENIAITGY-GVFDGSG 168
Query: 159 ----------------------------AIW---------------------------WN 163
+IW WN
Sbjct: 169 DSWRPVKKGKLTAGQWDALVKSGGVVDKSIWYPTAGSLKGALACKEFNNPEGIETEEEWN 228
Query: 164 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 223
R P+ RP L+ + S+ +++ V F+NSP W +HP+ C ++ I V + P S
Sbjct: 229 EIR----PWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINQVKVFNPWYSQ 284
Query: 224 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 283
N D +D +S N I ++ GDD + +KSG D+ G G P + ++ T G
Sbjct: 285 NGDALDLESCKNALIINNIFDAGDDAICIKSGKDKDGRERGEPCQNVIVKNNTVLHGHGG 344
Query: 284 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
VGSE SGGV+N+ VG+ K+ GRGG + I + +++M
Sbjct: 345 FVVGSEMSGGVKNIYVADCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHM 394
>gi|414344702|ref|YP_006986194.1| glycoside hydrolase family protein [Gluconobacter oxydans H24]
gi|411030009|gb|AFW03263.1| glycoside hydrolase family 28 [Gluconobacter oxydans H24]
Length = 477
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 135/456 (29%), Positives = 213/456 (46%), Gaps = 75/456 (16%)
Query: 3 RFLVTLSILLSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAI 62
R LV L +++ C + S S P+ Y DG+T + A + AI
Sbjct: 26 RRLV-LGGVVAALLCMPMTSHAASSRCDPVTYSARH----------DGRTNDGPAIQRAI 74
Query: 63 YRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDT--WNWPLIAPLP 120
+GG ++ + G++L+G +L +H+TL L KG+ + + DT ++W +
Sbjct: 75 TACS---EAGGGVVSLASGIWLSGPLSLKNHVTLNLEKGSTLLGSSDTRLFHWAFLGKA- 130
Query: 121 SYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGA-IWW----NMWRQRT---LPF 172
+PG +S I +QDV ITG+ G IDG GA +WW + +T LP+
Sbjct: 131 ------AQPGEALVSAID---VQDVAITGQ-GHIDGNGAAVWWPQAVRAHKTQTSGPLPY 180
Query: 173 -------------TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP 219
RP LIEF + + IS V NSP W + S + I ++TI P
Sbjct: 181 GPDYPGVPAANGLPRPWLIEFSHVQHGRISGVTATNSPMWTVVVRESSQIRIDHLTIRNP 240
Query: 220 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS 279
A S NTDGID SS +V + + I+TGDD +A+KSG + G A +S I+I + S
Sbjct: 241 ASSRNTDGIDLVSSDHVTMSNLEIATGDDNIAIKSGLTQPGQA----ASDISITQ----S 292
Query: 280 PF---SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENA 336
F G+++GSE + G ++ ++ N G+ +K+ RGG I I+ + M++
Sbjct: 293 RFGEGHGLSIGSELANGAHHIRISDVSFQNTLSGLRIKSGRDRGGDIGWISAEHLTMDHV 352
Query: 337 RKGIKI----AGDVGDHPDDKF--NPNA-----LPVVNGITIKDVWGTKVQQSGLIQGLK 385
R + I AG G P A P ++ +TI D+ T G++ GL
Sbjct: 353 RVPLSISDYYAGQPGGTQQTALMTEPAAPVTSTTPHIHDVTITDMTATNAGTVGVVLGLP 412
Query: 386 NSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQ 421
+P G+ L ++ L G L+ S VSG +++
Sbjct: 413 EAPIEGLTLRHVRLSARKG-----LQLSHVSGRSFE 443
>gi|86141409|ref|ZP_01059955.1| hypothetical protein MED217_05307 [Leeuwenhoekiella blandensis
MED217]
gi|85831968|gb|EAQ50423.1| hypothetical protein MED217_05307 [Leeuwenhoekiella blandensis
MED217]
Length = 453
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/336 (31%), Positives = 170/336 (50%), Gaps = 46/336 (13%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
++ ITDFG + K NT+A AI + +GGT++ +P G +LTG + S++ L+
Sbjct: 49 RLLITDFGADPNNKKKNTEAIAAAIDSAHAI--AGGTVV-IPKGEWLTGKIHFKSNVNLH 105
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
L +GA + ++D ++ L A L ++ G E Y I+ +++ ITG+ G + +
Sbjct: 106 LEEGATLLFSEDPQDY-LPAVLSTW-EGME--CYNYSPLIYAYECENIAITGK-GKLKAK 160
Query: 158 GAIW--W---------NMWR-----QRTLPFT-----------RPNLIEFMNSRSIIISN 190
W W N+ R + +P RP I+F S+ I++
Sbjct: 161 MDTWEVWFARPSGHMQNLKRLYEMASKDIPVEERQMVNDSANFRPQFIQFNRSKHILLEG 220
Query: 191 VIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLV 250
+ +NSPFW IHP S+V+IR V + A N DG+DP+ S NV IE+ GDD +
Sbjct: 221 IAIENSPFWVIHPYLSSDVIIREVNVFAHGH--NNDGVDPEMSQNVLIENCVFDQGDDAI 278
Query: 251 AVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENV------LAEHINL 304
AVK+G ++ P I IR + + +A+GSE SGGVENV +A + L
Sbjct: 279 AVKAGRNQDAWRLNTPVKNIVIRDCSVKNGHQLLAIGSELSGGVENVYMGNCEVAPNAKL 338
Query: 305 YNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 340
++ + +KTN RGG+++NI + D+ KGI
Sbjct: 339 NHL---LFIKTNERRGGYVKNIYMEDIKAGRIDKGI 371
>gi|260642009|ref|ZP_05414289.2| exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii DSM
17565]
gi|260623835|gb|EEX46706.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 546
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/344 (29%), Positives = 150/344 (43%), Gaps = 70/344 (20%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+++I FG GDG LNTKA +AI + + + GG + +P G++LTG L S++ LY
Sbjct: 58 EVNIEKFGAKGDGLFLNTKAINDAI---KDVNQHGGGKVIIPEGIWLTGPIELLSNVNLY 114
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
+ A++ T D +P+IA S+ R R S I +++ ITG GT DG
Sbjct: 115 TERNALVLFTGDFEAYPIIAT--SFEGLETR---RCQSPISARNAENIAITG-YGTFDGN 168
Query: 158 G------------------------------AIW-------------------------- 161
G IW
Sbjct: 169 GDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTPGSLKGAMACKDFNVPEGINTDE 228
Query: 162 -WNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA 220
WN R P+ RP L+ + S+ I++ V F+NSP W +HP+ C + + + ++ P
Sbjct: 229 EWNEIR----PWLRPVLLSIVKSKKILLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPW 284
Query: 221 DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP 280
S N D ID +S N I +S GDD + +KS DE G G P + ++ T
Sbjct: 285 YSQNGDAIDLESCKNALIINSVFDAGDDAICIKSDKDEDGRRRGEPCQNVIVKNNTVLHG 344
Query: 281 FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 324
G VGSE SGGV+N+ E VG+ K+ GRGG +
Sbjct: 345 HGGFVVGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 388
>gi|298385027|ref|ZP_06994586.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298262171|gb|EFI05036.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 528
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 185/417 (44%), Gaps = 61/417 (14%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+++I DFG + DG TLNT+A AI + + GG + +P G++LTG L S++ LY
Sbjct: 58 EVNIRDFGALSDGVTLNTEAINNAI---KAVSSKGGGKVIIPEGLWLTGPVVLLSNVNLY 114
Query: 98 LAKGAVIKATQDTWNWPLI-------------APLPSY--------GRGRERPGGRYMSF 136
K A+I + DT +P+I +P+ + G G G
Sbjct: 115 AEKNALIVFSSDTSLYPIIDTSFEGLDTKRCQSPISAMNAENIAITGNGVFDGAGDRWRP 174
Query: 137 IHGDGL-----QDVVITGENGTIDGQGAIWW----------------NMWRQRT------ 169
+ D + +++V +G G +D G +W+ N ++ T
Sbjct: 175 VKKDKMTERQWKNLVSSG--GKVDENGKVWYPDAGALKASVLMTGQNNGQKEITDEEWTY 232
Query: 170 -LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGI 228
+ RP ++ + S+ I++ V F+NSP W IHP+ C ++ + V + P S N D +
Sbjct: 233 MKSWLRPVMLSIVKSKRILLEGVTFKNSPGWCIHPLSCESLTLNDVKVFNPWYSQNGDAL 292
Query: 229 DPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 288
D +S NV + + + GDD + +KSG DE G G + I+ T G +GS
Sbjct: 293 DVESCKNVLVTNCFFDAGDDAICLKSGKDEDGRRRGESCENVIIKNNTVLHGHGGFVIGS 352
Query: 289 ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM---ENARKGIKIAGD 345
E SGGV NV + VG+ K+ GRGG + NI + ++ M N + +
Sbjct: 353 EMSGGVRNVYVSGCSFVGTDVGLRFKSTRGRGGVVENIFIDNINMIDIPNDALTMDLYYA 412
Query: 346 VGDHPDDKFNPNA---LPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL 399
V D P+ P+ PV I I +V ++ GL P I + N+ +
Sbjct: 413 VNDFPETPI-PDVNEETPVFRNIYISNVLCRGAGRAVYFNGLPEMPLKNIFIKNMTV 468
>gi|366053529|ref|ZP_09451251.1| polygalacturonase [Lactobacillus suebicus KCTC 3549]
Length = 439
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 175/383 (45%), Gaps = 60/383 (15%)
Query: 65 IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGR 124
I + SGG L+ + G +LTG NL S++T+ AVIK N L P+ +
Sbjct: 23 INKIGDSGGELI-IAQGEHLTGPINLVSNLTVTFETDAVIKFKN---NPELYTPVWTRWE 78
Query: 125 GRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWR-----QRTLP-------- 171
G E ++ +G +++VI G+ G +DG G+ WW+ +R RTLP
Sbjct: 79 GIECYA--MHPLMYANGKENIVIRGK-GVVDGSGSSWWDKFRNIEQEDRTLPREKYELDL 135
Query: 172 --------------------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVI 211
F RP LI+F I +S+ +NSPFW +H VY + + I
Sbjct: 136 AKLNPDYKTRTGGGGRPSTQFLRPPLIQFWKCHDIKLSDFTLENSPFWTLHMVYSNKISI 195
Query: 212 RYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGIT 271
+T PA++ NTD +D DSS +V +++ + GDD V +KSG E GI P+ +
Sbjct: 196 DNMTFSNPAEAINTDAMDIDSSEDVTVKNCLLDVGDDGVTLKSGSGEDGIRVNKPTKNVK 255
Query: 272 IRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDV 331
+ + GIA+GSET+ G+ +V + GI +K+ RGG I NI +S +
Sbjct: 256 VSDCRILASHGGIAIGSETAAGISDVEVSNCTFDGTRRGIRLKSRRTRGGTIENINLSGL 315
Query: 332 YMENARKGIKIAG---------------DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQ 376
M+ I + D G P D+ P+ + I+IK++ T V+
Sbjct: 316 KMDLCWCPISLEQYFAPGVLPEEEATVLDEGPQPVDETTPH----IRNISIKNIKATNVR 371
Query: 377 Q-SGLIQGLKNSPFTGICLSNIN 398
+ I GL + + + N +
Sbjct: 372 ATAAFIVGLPEANIENVEIENFD 394
>gi|261880664|ref|ZP_06007091.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270332617|gb|EFA43403.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 851
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 121/428 (28%), Positives = 187/428 (43%), Gaps = 56/428 (13%)
Query: 33 RYRNDKISITDFGGVGDGKTL-NTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLT 91
++ + + SIT FG N KA AI + GG + VP G +LTG+ +
Sbjct: 38 QFADREYSITQFGASPKASAAKNQKAINRAILMCS---KKGGGRIVVPRGEWLTGAIRMQ 94
Query: 92 SHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGEN 151
SH+ L + +GA +K + +PL+ G G Y I+ DV +TG+
Sbjct: 95 SHVNLVVEEGATLKFAFEPELYPLVKT-SWEGIG----CWNYSPCIYAYQATDVALTGK- 148
Query: 152 GTIDGQGA--IWWNM----------------------------------WRQRTLPF--- 172
GTIDG G+ WW M W QR
Sbjct: 149 GTIDGNGSKQTWWPMCGAPRYGFVKGETKEAQNLGSRAQLLKYAENDVPWDQRKFGMGKG 208
Query: 173 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDS 232
R L+ F+ S I+I ++ NSPFW IHP+ N+ + + D PN DG DP++
Sbjct: 209 LRSQLVNFVESDGILIKDLHLVNSPFWVIHPLLSKNITVD--GVFVQNDGPNGDGCDPEA 266
Query: 233 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSG 292
V I++ TGDD +A+KSG + G + PS I IR + G+ +GSE SG
Sbjct: 267 CDGVLIQNCTFDTGDDCIAIKSGRNNDGRLWNKPSQNIIIRNCKMADGHGGVVIGSEISG 326
Query: 293 GVENVLAE--HINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 350
G NV AE +++ ++ + +KTN RGG I NI + +V + + + + ++ P
Sbjct: 327 GCRNVFAEDCYMDSPHLDRVLRIKTNNCRGGLIENINMRNVTVGQCNEAV-LRINLDYEP 385
Query: 351 DDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN-SPFTGICLSNINLQGVA-GPTSP 408
++ P V + +++V + + I GL N I + N GV+ P S
Sbjct: 386 REECYRGFEPTVRKVYMENVTSKESKYGVQIIGLNNIENVYDITVKNCKFDGVSKAPVSI 445
Query: 409 PLKCSDVS 416
K D+
Sbjct: 446 SGKTRDIK 453
>gi|361068131|gb|AEW08377.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|376338080|gb|AFB33585.1| hypothetical protein 2_7803_01, partial [Pinus cembra]
Length = 138
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/137 (48%), Positives = 99/137 (72%), Gaps = 1/137 (0%)
Query: 254 SGWDEYGIAYGHPSSGITIRRVTGSS-PFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 312
SGWDEYGI YG PSS I IRRV G + SG+A+GSE SGG++ V A+ + ++N G+
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGQTHTSSGLALGSEMSGGIQGVHAQDLQIFNSRRGLR 60
Query: 313 VKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWG 372
+KT GRGG++R++ +S+V M+N GI G GDHPDD+++PNALP + IT KD+ G
Sbjct: 61 IKTAPGRGGYVRDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDIIG 120
Query: 373 TKVQQSGLIQGLKNSPF 389
+++ +G ++G++N+PF
Sbjct: 121 DEIKTAGSVEGIQNAPF 137
>gi|317056840|ref|YP_004105307.1| glycoside hydrolase family protein [Ruminococcus albus 7]
gi|315449109|gb|ADU22673.1| glycoside hydrolase family 28 [Ruminococcus albus 7]
Length = 513
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/313 (30%), Positives = 147/313 (46%), Gaps = 23/313 (7%)
Query: 23 VVTCSGIVPMRYRNDK----ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYV 78
V+ SG P+ +R K +S+ DFG GDG + +T + + AI + + R LY
Sbjct: 57 VLEISGEDPVTFRTAKESCAVSVRDFGAKGDGFSDDTVSIQTAINCLPNNGR-----LYF 111
Query: 79 PPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPS---------YGRGRERP 129
P GVYLT L SH+TL +++ A + D + +I +G
Sbjct: 112 PEGVYLTAPIVLKSHITLDISEKAKLLGLPDQSAYNVIPGTAKDIITGEDIHFGTWEGNA 171
Query: 130 GGRYMSFIHGDGLQDVVITGENGTIDGQGAI--WWNMWRQRTLPFTRPNLIEFMNSRSII 187
+ + I + +D+ I G G IDG WW ++R +P RP L+ F + I
Sbjct: 172 VPMHQALIFAEYAEDIRIVGR-GVIDGNAEAGGWWENVKERNIP--RPRLLFFNRCKLIT 228
Query: 188 ISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGD 247
+ + N+ W IHP + S + + I AP DSPNTD +DP++ NV I S GD
Sbjct: 229 VHGITVCNAASWQIHPYFSSYLHFLDLDITAPKDSPNTDALDPEACDNVWISGCRFSVGD 288
Query: 248 DLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNV 307
D +A+KSG + G + P+ IR + +GSE +GGV N+ E +
Sbjct: 289 DCIAIKSGKIDIGRKFKQPAENHNIRNCLMQFGHGAVTLGSEMAGGVRNLTVERCIFDHT 348
Query: 308 GVGIHVKTNIGRG 320
G+ +KT GRG
Sbjct: 349 DRGLRIKTRRGRG 361
>gi|116619801|ref|YP_821957.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116222963|gb|ABJ81672.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 528
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 121/430 (28%), Positives = 187/430 (43%), Gaps = 56/430 (13%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
+I D+G DG L T+AFR AI Q + +GG +YVP G Y++G L S++ L++
Sbjct: 25 NIADYGARKDGSALATEAFRSAI---QAAKAAGGGTVYVPAGQYISGPIELVSNLVLHID 81
Query: 100 KGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTID---- 155
GA ++ +P S GR + + I G L++V ITG G +
Sbjct: 82 AGATLR-------FPATRLPFSRGRWQGIEALTPVPLIGGRNLENVSITGR-GVLTTSQP 133
Query: 156 ---------GQGAIWWNMWR-------------QRTLPFTRPNLIEFMNSRSIIISNVIF 193
G G W ++ Q+ P P I M S++++I +
Sbjct: 134 EWTRIMGDPGSGPDWLHLLEILELKKPIPDQEYQKAAPQLLPMFISLMESKNVLIQGIHI 193
Query: 194 QNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVK 253
S W I VY N V+ V ++ +T GI DSS NV I D YI TGDD + +K
Sbjct: 194 VGSAMWPIQLVYDDNAVVSGV-MVETFGGHDTGGIYVDSSRNVRISDCYIDTGDDGIVIK 252
Query: 254 SGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHV 313
SG D G P+ I+I + +GSE SG + N++A +I +G+ +
Sbjct: 253 SGKDADGRRVNRPAENISITNCNVHRAHGAVVLGSEISGWIRNLVASNITCDGTQMGVRI 312
Query: 314 KTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKD---V 370
KT GRGG I ++ + M+N +GI I+ P++K P PV +I +
Sbjct: 313 KTRRGRGGGIEDVRFDNWTMQNVARGINISSFYVMAPENKSTPPEEPVSERTSIYRNIAI 372
Query: 371 WGTKVQQSGL---IQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPC 427
+ S L I+G+ P G+ +S+I + + + AY K
Sbjct: 373 SHMTINNSRLVIDIEGIPEMPIDGLRISDI------------VATAQIGMKAYNTKAMEL 420
Query: 428 SELSSSQQTG 437
+ S +TG
Sbjct: 421 HNVQLSAKTG 430
>gi|383114359|ref|ZP_09935123.1| hypothetical protein BSGG_1470 [Bacteroides sp. D2]
gi|313693935|gb|EFS30770.1| hypothetical protein BSGG_1470 [Bacteroides sp. D2]
Length = 524
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 183/422 (43%), Gaps = 67/422 (15%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+++I DFG DG TLNT+A +AI ++ H + GG + +P G++LTG L S++ L+
Sbjct: 57 QVNICDFGAKSDGVTLNTEAINKAI-KVVHDK--GGGKVIIPEGLWLTGPIVLQSNVNLH 113
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITG-------- 149
K A+I + DT +P+I S+ R R S I ++++ ITG
Sbjct: 114 AEKNALIVFSGDTSLYPIITT--SFEGLDTR---RCQSPISAMNVENIAITGYGVFDGAG 168
Query: 150 ---------------------ENGTIDGQGAIWW------------------------NM 164
G +D G +W+
Sbjct: 169 DRWRPVKKDKMTDRQWKNLVNSGGNVDENGKVWYPNEGALKASVLMSGQGNQQAEITSEE 228
Query: 165 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 224
W + + RP L+ + S+ +++ V F+NSP W +HP+ C ++++ V + P S N
Sbjct: 229 WEEMK-SWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYSQN 287
Query: 225 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 284
D +D +S NV I + + GDD + +KSG DE G G P + +R T G
Sbjct: 288 GDALDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRNNTVLHGHGGF 347
Query: 285 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG 344
+GSE SGGV+NV + VG+ K+ GRGG + NI ++++ M + IA
Sbjct: 348 VIGSEMSGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDALIAD 407
Query: 345 DVGDHPDDKFNP-----NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL 399
P P I I DV+ ++ + GL P I + N+ +
Sbjct: 408 LYYAAKSAPGEPIPSVSEETPAFRNIYISDVFCRGAGRAAYLNGLPEMPIENISIKNMVV 467
Query: 400 QG 401
G
Sbjct: 468 TG 469
>gi|295102197|emb|CBK99742.1| Endopolygalacturonase [Faecalibacterium prausnitzii L2-6]
Length = 518
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 178/386 (46%), Gaps = 33/386 (8%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+ + +G V DG+T NT + A+ GGT+ YVP G Y T S + S TLYL
Sbjct: 82 VDASRYGLVADGETDNTGRLQAALSTCPR----GGTV-YVPAGRYRTASLFMKSCTTLYL 136
Query: 99 AKGAVIKATQDTWNWPLI-APLPSYGRGRE--------RPGGRYMSFIHGDGLQDVVITG 149
KGAV+ D ++P++ +PS E P + ++ + DVV+TG
Sbjct: 137 EKGAVLLGDNDRTHYPILPGVIPSENEVDEYYLTGWEGNPLNSFAGLLNITQVHDVVVTG 196
Query: 150 ENGTID--GQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCS 207
E GT+D Q WW + + + + RP + ++S +I + + QNS W IHP++
Sbjct: 197 E-GTLDCDAQNGDWWIDPKVKRIAW-RPRAVAMVDSENICLHGITVQNSYSWTIHPIFVK 254
Query: 208 NVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPS 267
++ + I P ++PNTDGIDP+S I I GDD +A+K+ G+
Sbjct: 255 HLDLLSFNINNPYNAPNTDGIDPESCEYTRIIGVNIHVGDDCIAMKASKVFLGMKLKKSC 314
Query: 268 SGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG--GFIRN 325
IR GI +GSE SGGV++++ + + G+ VKT GRG I
Sbjct: 315 EHTVIRNCLLDKGHGGIVIGSEMSGGVKDMVVTQCLMDHTDRGLRVKTRRGRGNTAVIDG 374
Query: 326 ITVSDVYMENARKGIKIAGDVGDHPDDKFNP-----NALPV------VNGITIKDVWGTK 374
+ +V M + I PD +P ALPV + +T++D+ T
Sbjct: 375 LVFRNVEMRGVKAPFVINMFYFCDPDGH-SPYVQCREALPVDEYTPKLGTLTMEDIVATD 433
Query: 375 VQQSGL-IQGLKNSPFTGICLSNINL 399
Q +G GL P G+ + N+ +
Sbjct: 434 AQFAGCYFDGLPEQPIEGVSMKNVTI 459
>gi|261406869|ref|YP_003243110.1| glycoside hydrolase family protein [Paenibacillus sp. Y412MC10]
gi|261283332|gb|ACX65303.1| glycoside hydrolase family 28 [Paenibacillus sp. Y412MC10]
Length = 475
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 122/422 (28%), Positives = 173/422 (40%), Gaps = 63/422 (14%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+I DFG +GDG + NT+A A + GGT+L +P G++LTG L S + L+
Sbjct: 29 FNIADFGAIGDGLSDNTEA--FAAAIEACASQGGGTVL-IPAGLWLTGPIRLQSGIRLHA 85
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
GA++ + + ++PLI SY R R M I+G+ L++V ITG G DG G
Sbjct: 86 DAGALVHFSANRDDYPLIRT--SYEGLRTV---RCMPAIYGEDLENVAITG-TGIFDGSG 139
Query: 159 AIW---------WNMWRQ--------------------------RTL------------- 170
W W+Q ++L
Sbjct: 140 EAWRPVKRMKLTEGQWKQLIQSGGYEEGGVWWPTEQSLKSAALVKSLIAQNVQDPSAFEP 199
Query: 171 --PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGI 228
RP L++ R ++ F+NSP WN+HP C +V IR V+I S N DG+
Sbjct: 200 ARDHLRPTLVQLDRCRKVLFDGPTFRNSPAWNVHPWLCEHVTIRNVSIRNQWHSQNGDGL 259
Query: 229 DPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 288
D DS I DS GDD + +KSG D G A P+ +TIR G +GS
Sbjct: 260 DLDSCRYANIYDSVFDVGDDAICIKSGKDADGRALAVPTEYVTIRNCQVFHGHGGFVIGS 319
Query: 289 ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGD 348
E SG V N+ G+ K+ GRGG + I + V M+ K I
Sbjct: 320 EMSGDVRNIAITDCVFIGTDAGLRFKSTRGRGGTVERIYIRGVLMKEIAKEAIIFSSYYS 379
Query: 349 HPDDKFNPNAL----PVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 404
++ +P A+ PV I D + I+GL P I + L G
Sbjct: 380 GKNNTDDPVAVTEETPVFRDFHISDTTCIGAHTALHIKGLPEMPIENIVFDRVQLTARNG 439
Query: 405 PT 406
T
Sbjct: 440 AT 441
>gi|237717974|ref|ZP_04548455.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
gi|229452776|gb|EEO58567.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
Length = 524
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/417 (26%), Positives = 182/417 (43%), Gaps = 57/417 (13%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+++I DFG DG TLNT+A +AI ++ H + GG + +P G++LTG L S++ L+
Sbjct: 57 QVNICDFGAKSDGVTLNTEAINKAI-KVVHDK--GGGKVIIPEGLWLTGPIVLQSNVNLH 113
Query: 98 LAKGAVIKATQDTWNWPLI-------------APLPSY--------GRGRERPGGRYMSF 136
K A+I + DT +P+I +P+ + G G G
Sbjct: 114 AEKNALIVFSGDTSLYPIITTSFEGLDTRRCQSPISAMNAENIAITGYGVFDGAGDRWRP 173
Query: 137 IHGDGLQDVV---ITGENGTIDGQGAIWW------------------------NMWRQRT 169
+ D + D + G +D G +W+ W +
Sbjct: 174 VKKDKMTDRQWKNLVNSGGNVDENGKVWYPNEGALKASVLMSGQGNQQAEITSEEWEEMK 233
Query: 170 LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 229
+ RP L+ + S+ +++ V F+NSP W +HP+ C ++++ V + P S N D +D
Sbjct: 234 -SWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYSQNGDALD 292
Query: 230 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 289
+S NV I + + GDD + +KSG DE G G P + +R T G +GSE
Sbjct: 293 VESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRNNTVLHGHGGFVIGSE 352
Query: 290 TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDH 349
SGGV+NV + VG+ K+ GRGG + NI ++++ M + IA
Sbjct: 353 MSGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDALIADLYYAA 412
Query: 350 PDDKFNP-----NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 401
P P I I DV+ ++ + GL P I + N+ + G
Sbjct: 413 KSAPGEPIPSVSEETPAFRNIYISDVFCRGAGRAAYLNGLPEMPIENISIKNMVVTG 469
>gi|423288978|ref|ZP_17267829.1| hypothetical protein HMPREF1069_02872 [Bacteroides ovatus
CL02T12C04]
gi|423294865|ref|ZP_17272992.1| hypothetical protein HMPREF1070_01657 [Bacteroides ovatus
CL03T12C18]
gi|392668742|gb|EIY62236.1| hypothetical protein HMPREF1069_02872 [Bacteroides ovatus
CL02T12C04]
gi|392676056|gb|EIY69497.1| hypothetical protein HMPREF1070_01657 [Bacteroides ovatus
CL03T12C18]
Length = 524
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/417 (26%), Positives = 182/417 (43%), Gaps = 57/417 (13%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+++I DFG DG TLNT+A +AI ++ H + GG + +P G++LTG L S++ L+
Sbjct: 57 QVNICDFGAKSDGVTLNTEAINKAI-KVVHDK--GGGKVIIPEGLWLTGPIVLQSNVNLH 113
Query: 98 LAKGAVIKATQDTWNWPLI-------------APLPSY--------GRGRERPGGRYMSF 136
K A+I + DT +P+I +P+ + G G G
Sbjct: 114 AEKNALIVFSGDTSLYPIITTSFEGLDTRRCQSPISAMNAENIAITGYGVFDGAGDRWRP 173
Query: 137 IHGDGLQDVV---ITGENGTIDGQGAIWW------------------------NMWRQRT 169
+ D + D + G +D G +W+ W +
Sbjct: 174 VKKDKMTDRQWKNLVNSGGNVDENGKVWYPNEGALKASVLMSGQGNQQAEITSEEWEEMK 233
Query: 170 LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 229
+ RP L+ + S+ +++ V F+NSP W +HP+ C ++++ V + P S N D +D
Sbjct: 234 -SWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYSQNGDALD 292
Query: 230 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 289
+S NV I + + GDD + +KSG DE G G P + +R T G +GSE
Sbjct: 293 VESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRNNTVLHGHGGFVIGSE 352
Query: 290 TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDH 349
SGGV+NV + VG+ K+ GRGG + NI ++++ M + IA
Sbjct: 353 MSGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDALIADLYYAA 412
Query: 350 PDDKFNP-----NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 401
P P I I DV+ ++ + GL P I + N+ + G
Sbjct: 413 KSAPGEPIPSVSEETPAFRNIYISDVFCRGAGRAAYLNGLPEMPIENISIKNMVVTG 469
>gi|317047820|ref|YP_004115468.1| glycoside hydrolase family protein [Pantoea sp. At-9b]
gi|316949437|gb|ADU68912.1| glycoside hydrolase family 28 [Pantoea sp. At-9b]
Length = 447
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 124/393 (31%), Positives = 185/393 (47%), Gaps = 49/393 (12%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
S DFGG GD TL T+A ++AI R + GG + + PGV+L+G L S++TL +
Sbjct: 28 SPADFGGKGDDSTLATRAIQQAIDRCA---QQGGGHVTLGPGVWLSGPIVLKSNVTLVIP 84
Query: 100 KGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGA 159
G +KAT DT + + ++ RP +FI +G++ V I G GTIDG GA
Sbjct: 85 DGVTLKATPDTAQF-----VDAF---LGRPTQPNEAFILANGVRHVAIEG-GGTIDGNGA 135
Query: 160 -IWW-------NMWRQ----------RTLPFT----RPNLIEFMNSRSIIISNVIFQNSP 197
WW N R + +P RP L+E N S I N+ NSP
Sbjct: 136 QAWWPAAIALRNTVRSGHPEAFTAKYQGIPLANGMPRPWLVEMNNVTSSEIHNIRLTNSP 195
Query: 198 FWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWD 257
WN+ ++ I +T+ P+ +PNTDGID SSS++ I+ + ISTGDD +A+KSG
Sbjct: 196 MWNLVLRNSQHLKIDQLTVDNPSTAPNTDGIDIVSSSDILIKHADISTGDDHIAIKSG-- 253
Query: 258 EYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNI 317
G S I I+ GI++GSET G+ V H+ G+ VK+
Sbjct: 254 -ISAGSGVKSENIAIQDSVMRQGH-GISLGSETINGIGKVTVSHVRFVGAENGLRVKSGR 311
Query: 318 GRGGFIRNITVSDVYMENARKGIKI-------AGDVGDHPDDKFNPNAL----PVVNGIT 366
RG I + V V M + + + AG G + PV++GI
Sbjct: 312 DRGNKIGPLQVDHVTMTDVATPLLVTDSYSGQAGAAGHALIAPIAAAPVTPTTPVISGIE 371
Query: 367 IKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL 399
+ + T + + ++ GL +P T + L +I +
Sbjct: 372 VNHLAATGAKYAMILSGLPEAPVTDVRLRHIAI 404
>gi|407688164|ref|YP_006803337.1| glycoside hydrolase family protein [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407291544|gb|AFT95856.1| glycoside hydrolase family 28 domain-containing protein
[Alteromonas macleodii str. 'Balearic Sea AD45']
Length = 488
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 187/401 (46%), Gaps = 64/401 (15%)
Query: 47 VGDGKTLNTKAFREAIYR-IQHLRRSGGTLLYVPPGVYL-TGSFNLTSHMTLYLAKGAVI 104
V D N F++A++ I + R GG + VP G +L +G +L S++ L + GA I
Sbjct: 74 VTDFLNENGSDFKQALHAAIDQVARQGGGKVVVPKGDWLCSGPIHLQSNINLRIEAGATI 133
Query: 105 KATQDTWNW-PLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAI--W 161
+ + + ++ P + + G E G Y I+ ++ ITG+ GT+DG A W
Sbjct: 134 RFSTNPEDYKPYVF---TRWEGMELMG--YSPLIYAFEQSNIAITGK-GTLDGSAAKDNW 187
Query: 162 W---NMWRQRTL--------------------------------PFTRPNLIEFMNSRSI 186
W W+ T + RP I+ ++
Sbjct: 188 WPWKGKWKASTWGDDPVENQKYTRDTLQEMVENGTPVSDRVFENNYLRPPFIQPYRCENV 247
Query: 187 IISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTG 246
+I V SPFW ++PV C NV + + + PN+DG DP+S +NV I + TG
Sbjct: 248 LIEGVTILRSPFWLVNPVLCKNVTVN--DVYCKSFGPNSDGCDPESCTNVLISNCTFDTG 305
Query: 247 DDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLY- 305
DD +A+KSG + G P S I I + G+ +GSE SGGVEN+ A+H +
Sbjct: 306 DDCIAIKSGRNADGRRVNVPCSNIVIEHCEMKAGHGGVVIGSEISGGVENLYAQHCTMSS 365
Query: 306 -NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-----AGDVGDHPDDKFNPNAL 359
++ GI +KTN RGG ++N+ ++ + + + + GD G P
Sbjct: 366 PDLDRGIRIKTNSIRGGHLKNLNYRNIDIGTVKDAVVVNFFYEEGDAGKFP--------- 416
Query: 360 PVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 400
P++ ITI+++ ++ +++G ++P +G+ L+NI ++
Sbjct: 417 PLLEDITIENLNVASANRAFVLRGYDHTPISGLTLNNITIK 457
>gi|299148436|ref|ZP_07041498.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|298513197|gb|EFI37084.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
Length = 518
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 111/426 (26%), Positives = 177/426 (41%), Gaps = 75/426 (17%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+++I DFG DG TLNT+A AI ++ H + GG + +P G++LTG L S++ L+
Sbjct: 51 QVNICDFGAKSDGVTLNTEAINNAI-KVVHDK--GGGKVVIPEGLWLTGPIVLQSNVNLH 107
Query: 98 LAKGAVIKATQDTWNWPLI-------------APLPSY--------GRGRERPGGRYMSF 136
K A+I + DT +P+I +P+ + G G G
Sbjct: 108 AEKNALIVFSSDTSLYPIITTSFEGLDAKRCQSPISAMNAENIAITGYGVFDGAGDRWRP 167
Query: 137 IHGDGLQDVV---ITGENGTIDGQGAIWW------------------------NMWRQRT 169
+ D + D + G +D G +W+ W
Sbjct: 168 VKKDKMTDRQWKNLVNSGGKVDENGKVWYPNEGALKASVLMAGSGDKRTEITSEEWEDMK 227
Query: 170 LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 229
+ RP L+ + S+ I++ V F+NSP W +HP+ C ++ + V + P S N D +D
Sbjct: 228 -SWLRPVLLSIVKSKKILLEGVTFKNSPSWCLHPLSCESLTLNDVKVFNPWYSQNGDALD 286
Query: 230 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 289
+S NV I + + GDD + +KSG DE G G P I +R T G +GSE
Sbjct: 287 VESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENIIVRNNTVLHGHGGFVIGSE 346
Query: 290 TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR--------------NITVSDVYMEN 335
SGGV+NV + VG+ K+ GRGG + + ++D+Y
Sbjct: 347 MSGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDALIADLYYAA 406
Query: 336 ARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLS 395
+ V + P I I DV+ ++ + GL P I +
Sbjct: 407 KSAPSEPVPSVSEE---------TPAFRNIYISDVFCRGAGRAAYLNGLPEMPIENISIK 457
Query: 396 NINLQG 401
N+ + G
Sbjct: 458 NMVVTG 463
>gi|333382504|ref|ZP_08474174.1| hypothetical protein HMPREF9455_02340 [Dysgonomonas gadei ATCC
BAA-286]
gi|332828815|gb|EGK01507.1| hypothetical protein HMPREF9455_02340 [Dysgonomonas gadei ATCC
BAA-286]
Length = 717
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/360 (29%), Positives = 165/360 (45%), Gaps = 40/360 (11%)
Query: 3 RFLVTLSILLSYFNCFSLASV------VTCSGIVPMRYRNDKISITDFGGVGDGKTLNTK 56
RF + I+ Y C + AS V +G + N ++ D+G V DG T+NTK
Sbjct: 6 RFFIL--IICLYVTCMAYASRIPELSWVEKTGARNIPKSNRSYNVADYGAVADGVTMNTK 63
Query: 57 AFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLI 116
A ++AI R+GG + PG YLTGS L + + K + + D ++P +
Sbjct: 64 AIQKAI---DECARNGGGTVTFSPGKYLTGSVYLKEGVHFIIPKHTTLLGSTDLKDYPEM 120
Query: 117 APLPSYGRGRERPGGRYM----SFIHGDGLQDVVITGENGTIDGQGAIWWN-MWRQRT-- 169
R G M + I+ G ++V+++GE G + QG ++W+ W R
Sbjct: 121 ---------NTRVAGIEMQWPSALINVLGQKNVMVSGE-GVVHAQGKVFWDSYWAMRKDY 170
Query: 170 ----------LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL-- 217
RP + S + + + F+ + FW I +Y S + V I
Sbjct: 171 EAKGLRWIVDYDCKRPRTLLVSESSDVTVKGLTFRQAGFWTIQILYSSYCTVDGVIIQNN 230
Query: 218 APADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTG 277
P+TDG+D DSSS + +E+ I DD +KSG D G+ P+ I IR
Sbjct: 231 VGGHGPSTDGVDIDSSSYILVENCDIDCNDDNFCLKSGRDADGLRVNRPTEYIVIRNCIS 290
Query: 278 SSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 337
+ + GSETSGG+ +VLAE + VGI +K+ + RGG +I + DV M+N R
Sbjct: 291 RAGGGLLTCGSETSGGIRHVLAEGLKAKGTTVGIRLKSAMNRGGTTEHIYIRDVEMDNVR 350
>gi|383150861|gb|AFG57437.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150863|gb|AFG57438.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150865|gb|AFG57439.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150867|gb|AFG57440.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150869|gb|AFG57441.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150871|gb|AFG57442.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150873|gb|AFG57443.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150875|gb|AFG57444.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150877|gb|AFG57445.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150879|gb|AFG57446.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150881|gb|AFG57447.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150883|gb|AFG57448.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150885|gb|AFG57449.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150887|gb|AFG57450.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150889|gb|AFG57451.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150891|gb|AFG57452.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150893|gb|AFG57453.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
Length = 138
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/137 (48%), Positives = 99/137 (72%), Gaps = 1/137 (0%)
Query: 254 SGWDEYGIAYGHPSSGITIRRVTGSS-PFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 312
SGWDEYGI YG PSS I IRRV G + SG+A+GSE SGG++ V A+ I ++N G+
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGETHTSSGLALGSEMSGGIKGVHAQDIQIFNSRRGLR 60
Query: 313 VKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWG 372
+KT GRGG+++++ +S+V M+N GI G GDHPDD+++PNALP + IT KD+ G
Sbjct: 61 IKTAPGRGGYVKDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDIIG 120
Query: 373 TKVQQSGLIQGLKNSPF 389
+++ +G ++G++N+PF
Sbjct: 121 DEIKTAGSVEGIQNAPF 137
>gi|270339777|ref|ZP_06005984.2| exo-poly-alpha-D-galacturonosidase [Prevotella bergensis DSM 17361]
gi|270333786|gb|EFA44572.1| exo-poly-alpha-D-galacturonosidase [Prevotella bergensis DSM 17361]
Length = 464
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 160/338 (47%), Gaps = 52/338 (15%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+++ DFG GDG +NT+AF +AI L + GG L VP G++LTG +L ++ L+L
Sbjct: 48 VNLKDFGATGDGTAMNTEAFSKAI---SALNKQGGGRLVVPAGIWLTGLISLKDNIDLHL 104
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
+ AVI + D + + P+ +P + I ++V ITGE G IDG G
Sbjct: 105 ERNAVIVFSPDKRD---LIPVKD-----GKPDAKAAPCIRASKRKNVSITGE-GIIDGNG 155
Query: 159 AIW------------WNMWRQ-----------------RTLP----------FTRPNLIE 179
W WN ++ + LP R +L+
Sbjct: 156 EYWRPVKRGKVSDTEWNQYKAMGGTITEKGDLWYPFNLKHLPNVADNYDAQEKMRTHLVR 215
Query: 180 FMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIE 239
F + +++++ V +NSP +++ P C+NV+I V ++ P ++ N D ID + NV I
Sbjct: 216 FTDCQNVLVQGVTLRNSPKFHLVPQRCTNVIIDNVKVICPWNAQNGDAIDIGNCKNVLIV 275
Query: 240 DSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLA 299
++ I GDD + +K G + G+ G P I I+ G +GSE GG++N+
Sbjct: 276 NNTIDAGDDGICMKGGVGQKGVKDG-PCENINIQDNIVYHAHGGFVIGSEFCGGMKNIFV 334
Query: 300 EHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 337
+ G+ K+ +GRGG +I +S +YM + +
Sbjct: 335 HNNTFAGTDTGLRFKSGVGRGGTTSDIYISKIYMTDIK 372
>gi|160886912|ref|ZP_02067915.1| hypothetical protein BACOVA_04926 [Bacteroides ovatus ATCC 8483]
gi|156107323|gb|EDO09068.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
Length = 518
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 112/417 (26%), Positives = 182/417 (43%), Gaps = 57/417 (13%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+++I DFG DG TLNT+A +AI ++ H + GG + +P G++LTG L S++ L+
Sbjct: 51 QVNICDFGAKSDGVTLNTEAINKAI-KVVHDK--GGGKVIIPEGLWLTGPIVLQSNVNLH 107
Query: 98 LAKGAVIKATQDTWNWPLI-------------APLPSY--------GRGRERPGGRYMSF 136
K A+I + DT +P+I +P+ + G G G
Sbjct: 108 AEKNALIVFSGDTSLYPIITTSFEGLDTRRCQSPISAMNAENIAITGYGVFDGAGDRWRP 167
Query: 137 IHGDGLQDVV---ITGENGTIDGQGAIWW------------------------NMWRQRT 169
+ D + D + G +D G +W+ W +
Sbjct: 168 VKKDKMTDRQWKNLVNSGGNVDENGKVWYPNEGALKASVLMSGQGNQQAEITSEEWEEMK 227
Query: 170 LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 229
+ RP L+ + S+ +++ V F+NSP W +HP+ C ++++ V + P S N D +D
Sbjct: 228 -SWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYSQNGDALD 286
Query: 230 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 289
+S NV I + + GDD + +KSG DE G G P + +R T G +GSE
Sbjct: 287 VESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRNNTVLHGHGGFVIGSE 346
Query: 290 TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDH 349
SGGV+NV + VG+ K+ GRGG + NI ++++ M + IA
Sbjct: 347 MSGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDALIADLYYAA 406
Query: 350 PDDKFNP-----NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 401
P P I I DV+ ++ + GL P I + N+ + G
Sbjct: 407 KSAPGEPIPSVSEETPAFRNIYISDVFCRGAGRAAYLNGLPEMPIENISIKNMVVTG 463
>gi|336415491|ref|ZP_08595830.1| hypothetical protein HMPREF1017_02938 [Bacteroides ovatus
3_8_47FAA]
gi|335940370|gb|EGN02237.1| hypothetical protein HMPREF1017_02938 [Bacteroides ovatus
3_8_47FAA]
Length = 524
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 111/426 (26%), Positives = 177/426 (41%), Gaps = 75/426 (17%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+++I DFG DG TLNT+A AI ++ H + GG + +P G++LTG L S++ L+
Sbjct: 57 QVNICDFGAKSDGVTLNTEAINNAI-KVVHDK--GGGKVVIPEGLWLTGPIVLQSNVNLH 113
Query: 98 LAKGAVIKATQDTWNWPLI-------------APLPSY--------GRGRERPGGRYMSF 136
K A+I + DT +P+I +P+ + G G G
Sbjct: 114 AEKNALIVFSSDTSLYPIITTSFEGLDAKRCQSPISAMNAENIAITGYGVFDGAGDRWRP 173
Query: 137 IHGDGLQDVV---ITGENGTIDGQGAIWW------------------------NMWRQRT 169
+ D + D + G +D G +W+ W
Sbjct: 174 VKKDKMTDRQWKNLVNSGGKVDENGKVWYPNEGALKASVLMAGSGDKRTEITSEEWEDMK 233
Query: 170 LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 229
+ RP L+ + S+ I++ V F+NSP W +HP+ C ++ + V + P S N D +D
Sbjct: 234 -SWLRPVLLSIVKSKKILLEGVTFKNSPSWCLHPLSCESLTLNDVKVFNPWYSQNGDALD 292
Query: 230 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 289
+S NV I + + GDD + +KSG DE G G P I +R T G +GSE
Sbjct: 293 VESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENIIVRNNTVLHGHGGFVIGSE 352
Query: 290 TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR--------------NITVSDVYMEN 335
SGGV+NV + VG+ K+ GRGG + + ++D+Y
Sbjct: 353 MSGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDALIADLYYAA 412
Query: 336 ARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLS 395
+ V + P I I DV+ ++ + GL P I +
Sbjct: 413 KSAPSEPVPSVSEE---------TPAFRNIYISDVFCRGAGRAAYLNGLPEMPIENISIK 463
Query: 396 NINLQG 401
N+ + G
Sbjct: 464 NMVVTG 469
>gi|325842985|ref|ZP_08167837.1| polygalacturonase (pectinase) [Turicibacter sp. HGF1]
gi|325489511|gb|EGC91879.1| polygalacturonase (pectinase) [Turicibacter sp. HGF1]
Length = 415
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 139/275 (50%), Gaps = 19/275 (6%)
Query: 76 LYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRER------- 128
++P G Y T + L S++TL L KGA + + ++ A LP Y +
Sbjct: 5 FFIPKGTYATKTIFLKSNLTLELEKGATLLYSA---SFESGAILPGYTKNSNHEEYYLGS 61
Query: 129 ----PGGRYMSFIHGDGLQDVVITGENGTIDGQGAI-WWNMWRQRTLPFTRPNLIEFMNS 183
P + + I G + +V + GE G +DG G+I WW+ + R + + RP L + ++S
Sbjct: 62 WEGNPLDTFTALIQGVNVSNVNLIGE-GVLDGNGSIGWWDFPKVRNVAW-RPRLFQIIHS 119
Query: 184 RSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYI 243
+ + + QNSP W +HP++ ++ + I+ P DSPNTDG+DP+S V I +
Sbjct: 120 HHVNVQGITLQNSPSWTVHPLFSDDLKFIDLKIINPKDSPNTDGLDPESCHRVLILGVHF 179
Query: 244 STGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHIN 303
S GDD +A+KSG G S ITIR + + + +GSE +GGV+++L E
Sbjct: 180 SVGDDCIAIKSGKIYLGSRLKRASEYITIRNCSMNFGHGAVVIGSEMAGGVKHILVEQCL 239
Query: 304 LYNVGVGIHVKTNIGRG--GFIRNITVSDVYMENA 336
G+ +KT GRG + ++T + ME
Sbjct: 240 FNETDRGLRIKTRRGRGEAAIVEDVTFRHIEMEKV 274
>gi|281419728|ref|ZP_06250727.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM
18205]
gi|281406257|gb|EFB36937.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM
18205]
Length = 873
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 115/396 (29%), Positives = 181/396 (45%), Gaps = 74/396 (18%)
Query: 54 NTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNW 113
N KA + I + ++ GGT++ +P G + TG+ + S + L L +GAV++ + +
Sbjct: 64 NQKAINKLIALVS--KKGGGTIV-IPKGTWRTGAIEMKSFVELNLEEGAVLQFAFEPKLY 120
Query: 114 PLIAP----LPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG--AIWWNMW-- 165
PL+ L + Y I+ + D+ ITG+ GTIDG G WW W
Sbjct: 121 PLVRTAWEGLACWN---------YSPCIYAYKVSDIAITGK-GTIDGGGNNDTWWQ-WNG 169
Query: 166 -------------------RQRT-------LPFT----------RPNLIEFMNSRSIIIS 189
R R +PF RP L+ F+ S I+I
Sbjct: 170 NPYFGYKEGVTKEHQKMGSRARLQKMAENGVPFDERKFGMGQGLRPQLVNFVRSERILIK 229
Query: 190 NVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDL 249
+V NSPFW +HP+ C ++ + VT+ + PN DG DP++ NV I++ TGDD
Sbjct: 230 DVKMINSPFWVMHPLLCKDITVDGVTVWN--EGPNGDGCDPEACENVLIQNCIFHTGDDC 287
Query: 250 VAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGV 309
+A+KSG + G + PS I IR G+ +GSE SGG ENV AE+ + + +
Sbjct: 288 IAIKSGRNNDGRLWNKPSKNIIIRNCRMEDGHGGVVIGSEISGGCENVYAENCEMDSPHL 347
Query: 310 G--IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITI 367
+ +KTN RGG I+NI + V + ++ + + ++ P + P V +++
Sbjct: 348 ERILRIKTNNCRGGLIQNIHMRKVTVGQCKEAV-LKINLDYEPREACYRGFEPTVRNVSM 406
Query: 368 KDVWGTKVQQSGLIQG-----------LKNSPFTGI 392
+DV K LI G +KN F G+
Sbjct: 407 EDVTCQKSNYGVLIIGGNKVENVYDIHVKNCKFDGV 442
>gi|307135908|gb|ADN33771.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Cucumis melo subsp. melo]
Length = 188
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/123 (58%), Positives = 83/123 (67%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R +TDFGGVGDG T NT+AFR AI + L +GG L VPPG +LTGSFNLTSH
Sbjct: 50 RQHTAVLTDFGGVGDGVTSNTQAFRRAIEHLSPLAANGGAQLIVPPGKWLTGSFNLTSHF 109
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL++ K A I A+QD WP +A LPSYG GR+ PGGRY S I+G L DVVITG NG
Sbjct: 110 TLFVHKDATILASQDESEWPQVAILPSYGVGRDAPGGRYSSLIYGTNLTDVVITGNNGCK 169
Query: 155 DGQ 157
Q
Sbjct: 170 SSQ 172
>gi|402307012|ref|ZP_10826044.1| glycosyl hydrolase, family 88 [Prevotella sp. MSX73]
gi|400379233|gb|EJP32078.1| glycosyl hydrolase, family 88 [Prevotella sp. MSX73]
Length = 853
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 123/415 (29%), Positives = 184/415 (44%), Gaps = 65/415 (15%)
Query: 36 NDKISITDFGG-VGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
N I IT +G N KA AI + ++ GG + VP G + TG+ L SH+
Sbjct: 41 NRTILITAYGAKTSASAAQNQKAINRAI-AVASMK--GGGSVVVPNGTWNTGAITLKSHV 97
Query: 95 TLYLAKGAVIKATQDTWNWPLIAP----LPSYGRGRERPGGRYMSFIHGDGLQDVVITGE 150
L + +GA + + +PL+ L Y Y I+ G D+ ++G+
Sbjct: 98 NLVVEEGATLHFVFEPDLYPLVRTAWEGLECYN---------YSPCIYAYGATDIAVSGK 148
Query: 151 NGTIDGQGA--IWW---------------------------NMWRQRTLPFT-------- 173
GTIDG G+ WW + + +P
Sbjct: 149 -GTIDGGGSNDTWWAWNGNPRFGYKEGVTTESQRLGSRAQLQKYAEDGVPVEKRKFGKGC 207
Query: 174 --RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 231
RP LI FM+ I+I +V NSPFW IHP+ N+ + V I + PN DG DP+
Sbjct: 208 GLRPQLINFMHCERILIRDVKMVNSPFWVIHPLLSKNITVDNVYIWN--EGPNGDGCDPE 265
Query: 232 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 291
+ NV I++ TGDD +A+KSG + G +G PS I IR G+ +GSE S
Sbjct: 266 ACENVLIQNCTFHTGDDCIAIKSGRNNDGRLWGKPSKNIIIRNCKMEDGHGGVVIGSEIS 325
Query: 292 GGVENVLAE--HINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI-KIAGDVGD 348
GG ENV AE +++ + + +KTN RGG I+NI + +V + ++ + KI D
Sbjct: 326 GGCENVYAEDCYMDSPELERVLRIKTNNCRGGLIQNINMRNVKVGQCKEAVLKINLDY-- 383
Query: 349 HPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN-SPFTGICLSNINLQGV 402
P + P V + +++V K + L+ GL I +SN GV
Sbjct: 384 EPREACYRGFQPTVRNVNMENVTCGKSEYGVLVIGLNEVENVYDINVSNCKFDGV 438
>gi|315608643|ref|ZP_07883624.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
gi|315249682|gb|EFU29690.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
Length = 873
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 123/415 (29%), Positives = 184/415 (44%), Gaps = 65/415 (15%)
Query: 36 NDKISITDFGG-VGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
N I IT +G N KA AI + ++ GG + VP G + TG+ L SH+
Sbjct: 61 NRTILITAYGAKTSASAAQNQKAINRAI-AVASMK--GGGSVVVPNGTWNTGAITLKSHV 117
Query: 95 TLYLAKGAVIKATQDTWNWPLIAP----LPSYGRGRERPGGRYMSFIHGDGLQDVVITGE 150
L + +GA + + +PL+ L Y Y I+ G D+ ++G+
Sbjct: 118 NLVVEEGATLHFVFEPDLYPLVRTAWEGLECYN---------YSPCIYAYGATDIAVSGK 168
Query: 151 NGTIDGQGA--IWW---------------------------NMWRQRTLPFT-------- 173
GTIDG G+ WW + + +P
Sbjct: 169 -GTIDGGGSNDTWWAWNGNPRFGYKEGVTTESQRLGSRAQLQKYAEDGVPVEKRKFGKGR 227
Query: 174 --RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 231
RP LI FM+ I+I +V NSPFW IHP+ N+ + V I + PN DG DP+
Sbjct: 228 GLRPQLINFMHCERILIRDVKMVNSPFWVIHPLLSKNITVDNVYIWN--EGPNGDGCDPE 285
Query: 232 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 291
+ NV I++ TGDD +A+KSG + G +G PS I IR G+ +GSE S
Sbjct: 286 ACENVLIQNCTFHTGDDCIAIKSGRNNDGRLWGKPSKNIIIRNCKMEDGHGGVVIGSEIS 345
Query: 292 GGVENVLAE--HINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI-KIAGDVGD 348
GG ENV AE +++ + + +KTN RGG I+NI + +V + ++ + KI D
Sbjct: 346 GGCENVYAEDCYMDSPELERVLRIKTNNCRGGLIQNINMRNVKVGQCKEAVLKINLDY-- 403
Query: 349 HPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN-SPFTGICLSNINLQGV 402
P + P V + +++V K + L+ GL I +SN GV
Sbjct: 404 EPREACYRGFQPTVRNVNMENVTCGKSEYGVLVIGLNEVENVYDINVSNCKFDGV 458
>gi|288926468|ref|ZP_06420388.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
gi|288336759|gb|EFC75125.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
Length = 843
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 123/415 (29%), Positives = 184/415 (44%), Gaps = 65/415 (15%)
Query: 36 NDKISITDFGG-VGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
N I IT +G N KA AI + ++ GG + VP G + TG+ L SH+
Sbjct: 31 NRTILITAYGAKTSASAAQNQKAINRAI-AVASMK--GGGSVVVPNGTWNTGAITLKSHV 87
Query: 95 TLYLAKGAVIKATQDTWNWPLIAP----LPSYGRGRERPGGRYMSFIHGDGLQDVVITGE 150
L + +GA + + +PL+ L Y Y I+ G D+ ++G+
Sbjct: 88 NLVVEEGATLHFVFEPDLYPLVRTAWEGLECYN---------YSPCIYAYGATDIAVSGK 138
Query: 151 NGTIDGQGA--IWW---------------------------NMWRQRTLPFT-------- 173
GTIDG G+ WW + + +P
Sbjct: 139 -GTIDGGGSNDTWWAWNGNPRFGYKEGVTTESQRLGSRAQLQKYAEDGVPVEKRKFGKGR 197
Query: 174 --RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 231
RP LI FM+ I+I +V NSPFW IHP+ N+ + V I + PN DG DP+
Sbjct: 198 GLRPQLINFMHCERILIRDVKMVNSPFWVIHPLLSKNITVDNVYIWN--EGPNGDGCDPE 255
Query: 232 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 291
+ NV I++ TGDD +A+KSG + G +G PS I IR G+ +GSE S
Sbjct: 256 ACENVLIQNCTFHTGDDCIAIKSGRNNDGRLWGKPSKNIIIRNCKMEDGHGGVVIGSEIS 315
Query: 292 GGVENVLAE--HINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI-KIAGDVGD 348
GG ENV AE +++ + + +KTN RGG I+NI + +V + ++ + KI D
Sbjct: 316 GGCENVYAEDCYMDSPELERVLRIKTNNCRGGLIQNINMRNVKVGQCKEAVLKINLDY-- 373
Query: 349 HPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN-SPFTGICLSNINLQGV 402
P + P V + +++V K + L+ GL I +SN GV
Sbjct: 374 EPREACYRGFQPTVRNVNMENVTCGKSEYGVLVIGLNEVENVYDINVSNCKFDGV 428
>gi|320106925|ref|YP_004182515.1| glycoside hydrolase family protein [Terriglobus saanensis SP1PR4]
gi|319925446|gb|ADV82521.1| glycoside hydrolase family 28 [Terriglobus saanensis SP1PR4]
Length = 460
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 107/340 (31%), Positives = 172/340 (50%), Gaps = 28/340 (8%)
Query: 12 LSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRS 71
+S + +L V +C+ + + + ++T+FG GDG TL++ A + I +S
Sbjct: 7 VSQTSFVALLMVASCNMLFAEKSKT--FNVTNFGAKGDGITLDSPAIQRTI---DAAAKS 61
Query: 72 GGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGG 131
GGT+++ G YL+GS + S +TL + KG I +Q ++PL +P+ G E
Sbjct: 62 GGTVVF-RAGTYLSGSIFVKSGVTLRVDKGVTILGSQKISDYPL---MPTRVAGIEMTWP 117
Query: 132 RYMSFIHGDGLQDVVITGENGTIDGQGAIWWN-MWRQRTLPFTR------------PNLI 178
+ I+ ++ ITGE GTIDG G ++W+ W R TR P LI
Sbjct: 118 AALVNIYEQ--KNAEITGE-GTIDGDGKVFWDGYWSLRKDYDTRGIRWAADYDSKRPRLI 174
Query: 179 EFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL--APADSPNTDGIDPDSSSNV 236
+ NS + +S ++ + S FW +H Y +V + +TI P+TDGID DSS V
Sbjct: 175 QVFNSSQVKLSGLMLRRSGFWTVHICYSHDVTLDGLTIRNNEGGRGPSTDGIDIDSSKKV 234
Query: 237 CIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVEN 296
++ + I+ DD + +K+G D G+ P+ I +R +G+ +GSETSGG N
Sbjct: 235 LVQHADIAVNDDALCLKAGRDSDGLRVNRPTEDIVLRDSVIRDGAAGVTIGSETSGGFRN 294
Query: 297 VLAEHIN-LYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 335
+ A + L V VGI K+ RGG+ N+ D+ M +
Sbjct: 295 IEAYGLTVLKQVPVGILFKSARTRGGWGENLRFHDITMTD 334
>gi|15893646|ref|NP_346995.1| polygalacturonase [Clostridium acetobutylicum ATCC 824]
gi|337735568|ref|YP_004635015.1| polygalacturonase [Clostridium acetobutylicum DSM 1731]
gi|384457079|ref|YP_005669499.1| Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
EA 2018]
gi|15023202|gb|AAK78335.1|AE007550_2 Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
ATCC 824]
gi|325507768|gb|ADZ19404.1| Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
EA 2018]
gi|336292627|gb|AEI33761.1| putative polygalacturonase (pectinase) [Clostridium acetobutylicum
DSM 1731]
Length = 513
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 96/309 (31%), Positives = 155/309 (50%), Gaps = 22/309 (7%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
++I DFG VGDG +NT + AI R + +P G YLTG L S++TL L
Sbjct: 84 VNILDFGAVGDGNHVNTAFIQAAIQVCPAFGR-----VIIPKGTYLTGPLFLKSNITLEL 138
Query: 99 AKGAVIKATQDTWNWPLIAPLPSY-------GRGRERPGGRYMSFIHGDGLQDVVITGEN 151
+G+V+ ++ ++P++ S G + S I +++V I G+
Sbjct: 139 EEGSVLLGLKEREHYPILKANISMTNRDFYLGSWEGNEADCFASLITAINVENVNIIGK- 197
Query: 152 GTIDGQGAI--WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNV 209
GTIDG WW +++ + + RP + ++I++ V +NSP W IHP+ ++
Sbjct: 198 GTIDGNSDFDTWWFKAKEKRIAW-RPRTLFLNACKNILVEGVTIKNSPSWTIHPLMSDHL 256
Query: 210 VIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHP--S 267
++I P ++PNTD +DP+S NV I S GDD +A+KSG + I+ +P S
Sbjct: 257 KFINLSIENPFNAPNTDALDPESCKNVLILGDTFSVGDDCIAIKSG--KIDISKKNPVSS 314
Query: 268 SGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG--GFIRN 325
I IR S + +GSE S G++++ E G+ +KT GRG G I N
Sbjct: 315 ENINIRNCNMRSGHGAVVLGSEMSSGLKSIFIEKCIFNATDRGLRIKTRRGRGSKGIIDN 374
Query: 326 ITVSDVYME 334
I + ++ M+
Sbjct: 375 IHMKNIKMD 383
>gi|410636673|ref|ZP_11347265.1| polygalacturonase, putative, pga28A [Glaciecola lipolytica E3]
gi|410143760|dbj|GAC14470.1| polygalacturonase, putative, pga28A [Glaciecola lipolytica E3]
Length = 476
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 191/408 (46%), Gaps = 65/408 (15%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
SI DFG + ++ A R AI + +GG + VP G + TG +L S++ L++A
Sbjct: 63 SIKDFGAKPGKQNDSSMAIRAAIADVAS---AGGGTVLVPAGEFYTGPVHLESNINLHIA 119
Query: 100 KGAVIKATQDTWNW-PLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
+GAV+ + + P + + G E G I+ +V +TG+ G ++G G
Sbjct: 120 QGAVLHFYPEPERYKPYVF---TRWEGTELMG--LSPLIYAFEKTNVAVTGK-GILEGGG 173
Query: 159 A--IWW---NMWR------------------------------QRTLP--FTRPNLIEFM 181
+ WW W+ QR + RP I+ +
Sbjct: 174 SHTHWWPWKGKWKEAEWGDHPVENQKFTRDPLREMAENEVPVAQRVFDDNYLRPPFIQPI 233
Query: 182 NSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDS 241
++++I V +NSPFW ++PV C NV ++ I + PN+DG DP++ +V I++
Sbjct: 234 RCKNVLIEGVTIKNSPFWLVNPVLCENVTVQ--GIHCESYGPNSDGCDPEACKDVLIQNC 291
Query: 242 YISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEH 301
TGDD +A+KSG + G G S I I + G+ +GSE SGGV N+ ++
Sbjct: 292 IFDTGDDCIAIKSGRNADGRRVGVASENILIENCQMKAGHGGVVIGSEISGGVRNLYVDN 351
Query: 302 INLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-----AGDVGDHPDDKF 354
+ ++ GI +KTN RGG ++N+ ++ + + I I GDVG KF
Sbjct: 352 CEMSSPDLDRGIRIKTNSIRGGHLKNLNYRNINIGQVKDAIVINFYYEEGDVG-----KF 406
Query: 355 NPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 402
PV+ I I+++W ++ ++G ++P TG+ L N+ V
Sbjct: 407 T----PVLEDIRIENLWVEHATRAFSLRGYPHTPITGVTLKNLTFVKV 450
>gi|251790610|ref|YP_003005331.1| glycoside hydrolase family 28 [Dickeya zeae Ech1591]
gi|247539231|gb|ACT07852.1| glycoside hydrolase family 28 [Dickeya zeae Ech1591]
Length = 467
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 122/445 (27%), Positives = 195/445 (43%), Gaps = 53/445 (11%)
Query: 2 FRFLVTLSILLSYFNCFSLASVVTCSGIVPMRYRN----DKI-SITDFGGVGDGK--TLN 54
+ T +++ FSL + +G+ D++ +T +G G LN
Sbjct: 1 MKHCFTYGVIMHKGIAFSLLASCALAGMSAQSAEKVAFPDRVCDVTRYGAEGHRLQIALN 60
Query: 55 TKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWP 114
T +F++AI +GG + VP G YL L S++ L+L K A + A+ +
Sbjct: 61 TSSFQKAI---DECAAAGGGTVLVPAGNYLVEPLFLKSNVRLHLEKHATLVASTGESAYR 117
Query: 115 LIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQ------R 168
R + G ++ FI Q+V ITGE GTIDGQGA+WW WR+ +
Sbjct: 118 AT----DSTRYAQAENG-WLPFISIADAQNVAITGE-GTIDGQGAVWWERWREAIRATGK 171
Query: 169 TLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGI 228
RP LI S +++ V NSP +++ Y +V + +I+AP +PNTD I
Sbjct: 172 KGGTDRPRLIYITRSSQVLVDGVTLTNSPSFHVVMRYARDVTVNGTSIIAPWHAPNTDAI 231
Query: 229 DPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 288
DP S N+ I ++ I DD +A+K+ + G + V GI++GS
Sbjct: 232 DPIDSQNIRITNNVIDCNDDHIAIKAEKPDSRFPDGVVDNVYIANNVLKQG--RGISIGS 289
Query: 289 ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG---- 344
ETSGGV NVL E+ GI +K+ G+GG ++N+T M N + +G
Sbjct: 290 ETSGGVNNVLVENNRFEGSMYGIRIKSLRGKGGEVKNVTYRHTRMVNVEVPLVFSGYYQA 349
Query: 345 -----------------DVGDH-------PDDKFNPNALPVVNGITIKDVWGT-KVQQSG 379
+G+ P F+ P + ITI D+ T + + +G
Sbjct: 350 APIVQAEVDKLLQAGGFTLGEQIYPPDTEPAQPFDKVKTPHFSNITIVDLESTGRSKAAG 409
Query: 380 LIQGLKNSPFTGICLSNINLQGVAG 404
I G+ +P +G + ++ G
Sbjct: 410 YIIGVPEAPLSGFHFEQVRIEAEKG 434
>gi|315606960|ref|ZP_07881966.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
gi|315251341|gb|EFU31324.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
Length = 459
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 115/397 (28%), Positives = 171/397 (43%), Gaps = 43/397 (10%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYL-TGSFNLTSHMTLY 97
I + G DGKT A +A+ + R+ G + + GV+L G +L + L
Sbjct: 45 IDLARLGAKTDGKTDARPAMIKAL---RQARKWGRARIVLSGGVFLMCGPIHLVDGVCLD 101
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPG-GRYMSFIHGDGLQDVVITGENGTIDG 156
+ +GA ++ + + + LP+ E Y I+G L DV I G+ G IDG
Sbjct: 102 IREGATLRFSPEPRFY-----LPTVATSWEGTFLNNYSPMIYGRNLHDVSIVGK-GLIDG 155
Query: 157 QGAIWWNMWRQRTLP------------------------FTRPNLIEFMNSRSIIISNVI 192
A + WR R + RP LI+ R++ I V
Sbjct: 156 NCAATFATWRARQKEGQTLSRRMNHEERPLAERNFGEGHWLRPQLIQLFGCRNVTIEGVK 215
Query: 193 FQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAV 252
NSPFW IH + NV+ R + A N DGIDP+SS NV IED GDD VA+
Sbjct: 216 IINSPFWCIHLLQSENVICR--GLRYDAKLVNNDGIDPESSRNVLIEDVSFDNGDDNVAI 273
Query: 253 KSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYN-VGVGI 311
KSG D G + HPS I IRR + +GSE SGGV NV E + G+
Sbjct: 274 KSGRDNDGWTHAHPSENIIIRRCRFKG-LHAVVIGSEMSGGVRNVFVEDCDFAGYCKRGL 332
Query: 312 HVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVW 371
++KTN RGG+++NI + D + I + + + V + + V
Sbjct: 333 YIKTNPDRGGYVKNIYMKDCRFDEVEDLIYV---TSMYAGEGLGSRHFSEVEHLLVDGVS 389
Query: 372 GTKVQQSGLI-QGLKNSPFTGICLSNINLQGVAGPTS 407
+ + +G++ QG K P + + + + V S
Sbjct: 390 CRRARAAGIVLQGTKAKPIRDVTIRRVEIGEVKNAVS 426
>gi|374374281|ref|ZP_09631940.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
gi|373233723|gb|EHP53517.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
Length = 465
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 122/410 (29%), Positives = 183/410 (44%), Gaps = 53/410 (12%)
Query: 26 CSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLT 85
C P ++ K+ IT FG V + NT A AI L GG ++ +P G +LT
Sbjct: 50 CKINTPDFSKSKKLVITGFGAVPGDQQKNTAAIARAIATANKL---GGGIVVIPKGEWLT 106
Query: 86 GSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDV 145
G +L S++ L+L KGA + + + ++ + + S G E Y I+ ++V
Sbjct: 107 GKIHLKSNVNLHLEKGATLLFSGNPQDY--LPAVVSSWEGME--CYNYSPLIYVYECKNV 162
Query: 146 VITGENGTIDGQGAIW---------------------WNM--WRQRTL----PFTRPNLI 178
ITGE GT+ Q A W WN QR + RP I
Sbjct: 163 AITGE-GTLKAQMATWEKWFARPRAHMESIKRLYNLAWNRAPLEQRQMVNDTAHLRPQFI 221
Query: 179 EFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCI 238
+F S +I++ V NSPFW IH N+ +R + + A N DG+DP+ S NV I
Sbjct: 222 QFNRSENILLEGVSVVNSPFWTIHLYLSKNIRLRNLNVYAHGH--NNDGVDPEMSQNVLI 279
Query: 239 EDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVL 298
E+ GDD +A+KSG + G PS I IR T + +A+GSE SGG+ENV
Sbjct: 280 ENCVFDQGDDAIAIKSGRNPEGWRLKTPSKNIVIRNCTVKNGHQLVAIGSELSGGIENVF 339
Query: 299 AEHINLYNVGVGIH---VKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFN 355
+H + + H +KTN GG+++NI Y N R G G +G D +
Sbjct: 340 IDHCTVLDGAKLNHLLFIKTNERMGGYVKNI-----YASNIRSGKIDLGILGIETDVLYQ 394
Query: 356 --------PNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNI 397
L + I + ++ ++V+ + G K P + L N+
Sbjct: 395 WRDLVPTYEKRLTPIKDIFLTNIHASEVKFIARVLGQKALPVETVSLKNV 444
>gi|257440293|ref|ZP_05616048.1| polygalacturonase [Faecalibacterium prausnitzii A2-165]
gi|257197327|gb|EEU95611.1| polygalacturonase (pectinase) [Faecalibacterium prausnitzii A2-165]
Length = 518
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 179/386 (46%), Gaps = 33/386 (8%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+ + +G V DG T NT + A+ GGT+ YVP G Y T S + S TLYL
Sbjct: 82 VDASRYGLVADGTTDNTGKLQAALSTCP----KGGTV-YVPAGRYRTSSLFMKSCTTLYL 136
Query: 99 AKGAVIKATQDTWNWPLI-APLPSYGRGRE--------RPGGRYMSFIHGDGLQDVVITG 149
KGAV+ D ++P++ +PS E P + ++ + DVV+TG
Sbjct: 137 EKGAVLLGDNDRTHYPILPGVIPSENEVDEYYLTGWEGNPLDSFAGLLNITQVHDVVVTG 196
Query: 150 ENGTID--GQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCS 207
E GT+D Q WW + + + + RP + ++S ++ + + QNS W IHP++
Sbjct: 197 E-GTLDCDAQNGDWWINQKVKRIAW-RPRAVAAVDSENVCLHGITVQNSYSWTIHPIFVK 254
Query: 208 NVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPS 267
++ + I P ++PNTDGIDP+S + I + I GDD +A+K+ G+
Sbjct: 255 HLDLLNFNINNPYNAPNTDGIDPESCEYIRIIGANIHVGDDCIAMKASKVFLGMKLKKSC 314
Query: 268 SGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG--GFIRN 325
IR GI +GSE SGGV++++ + + G+ VKT GRG I
Sbjct: 315 EHTVIRNCLLDKGHGGIVIGSEMSGGVKDMVVTQCLMDHTDRGLRVKTRRGRGNTAVIDG 374
Query: 326 ITVSDVYMENARKGIKIAGDVGDHPDDKFNP-----NALPV------VNGITIKDVWGTK 374
+ +V M + I PD +P +A+PV + +T++D+ T
Sbjct: 375 LVFRNVEMRGVKTPFVINMFYFCDPDGH-SPYVQCRDAMPVDEYTPKLGSLTMEDIVATD 433
Query: 375 VQQSGL-IQGLKNSPFTGICLSNINL 399
Q +G GL P I + N+ +
Sbjct: 434 AQFAGCYFDGLPEQPIERISMKNVTI 459
>gi|146311767|ref|YP_001176841.1| glycoside hydrolase family protein [Enterobacter sp. 638]
gi|145318643|gb|ABP60790.1| glycoside hydrolase, family 28 [Enterobacter sp. 638]
Length = 460
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 121/406 (29%), Positives = 187/406 (46%), Gaps = 49/406 (12%)
Query: 37 DKI-SITDFGGVGD--GKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSH 93
DK+ +IT +G G LNT+A ++AI +GG + VP G +LT L S+
Sbjct: 33 DKVCNITQYGAEGHRLQIALNTEAIQKAI---DDCAAAGGGTVLVPKGNFLTNPLFLKSN 89
Query: 94 MTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGT 153
+ L L K A + A+ + + + E G ++ FI Q+V I GE GT
Sbjct: 90 IQLKLEKDATLVASTEVAAYRA----DDKSKYAEAENG-WLPFISIADAQNVAIVGE-GT 143
Query: 154 IDGQGAIWWNMWRQRTLPF------TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCS 207
IDGQGA+WW WR+ RP LI S +++I V +SP +++ Y
Sbjct: 144 IDGQGAVWWERWRENIRATGKKGGTDRPRLIYITRSHNVLIDGVTLTHSPSFHVVTRYAH 203
Query: 208 NVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPS 267
+V I IL+P +PNTD IDP S N+ I ++YI DD +A+K+ + G
Sbjct: 204 DVDINGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAIKAEKADPRFPDG-VV 262
Query: 268 SGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 327
I I T GI++GSE++GGV NVL E+ GI +K+ G+GG ++NI
Sbjct: 263 DNIYIANNTLKQG-RGISIGSESAGGVNNVLVENNTFEGSMYGIRIKSPRGKGGEVKNIV 321
Query: 328 VSDVYMEN--------------------ARKGIKIAG-DVGDH-------PDDKFNPNAL 359
+ M N K +K G +G+ P F+
Sbjct: 322 YRNTKMHNVEVPLVFSAYYKAAPIVEAEVEKLLKEGGFTLGEQIYPPDSDPKQPFDKYKT 381
Query: 360 PVVNGITIKDVWGT-KVQQSGLIQGLKNSPFTGICLSNINLQGVAG 404
P + IT++++ T + + I G +P +G +N+N++ G
Sbjct: 382 PHFSNITVENLTSTGDSKAAAYIIGTPEAPLSGFHFTNVNIEAAQG 427
>gi|374312327|ref|YP_005058757.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358754337|gb|AEU37727.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 543
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 111/385 (28%), Positives = 184/385 (47%), Gaps = 49/385 (12%)
Query: 43 DFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGA 102
D G GDG TLNT A ++A+ +GG ++ +PPG +L+G L SH+TL+L GA
Sbjct: 34 DTGARGDGHTLNTNALQKAV---DQAAAAGGGVVVIPPGDFLSGGLVLRSHVTLHLEAGA 90
Query: 103 VIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWW 162
+++ + ++ P G G ++ F +D+ ITG +GTIDG G+ +W
Sbjct: 91 ILRGSPRVEDYEYRPGPPVEGDS----NGHHLLF--ALDAEDIAITG-HGTIDGGGSAFW 143
Query: 163 N-----------------MWRQRTLPFTRPN-LIEFMNSRSIIISNVIFQNSPFWNIHPV 204
+ W RP+ +IE R++ I V N+P W + PV
Sbjct: 144 HRKGRSTPRPEDLWGDVIAWDYEPATPRRPSPMIELARCRNVRIEGVTLTNAPGWTLRPV 203
Query: 205 YCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYG 264
C V+IR + + P +PNTDG+D + NV + D I+TGDD + +KS + YG
Sbjct: 204 ACETVLIRGIRVRNPIYAPNTDGMDITACRNVFVSDCDIATGDDAICIKS-ENPYGELL- 261
Query: 265 HPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGV---------GIHVKT 315
P+ IT+ S+ +G VG+ T G VEN++ + +YN GI ++
Sbjct: 262 -PTKNITVTNCVLSTCCNGFKVGTSTHGRVENIVFSNSVIYNESTTPLNERATSGIALE- 319
Query: 316 NIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKV 375
+ GG + + +S++ MENAR + + +G + P + GI + + T
Sbjct: 320 -VVDGGSMSGVLISNIQMENARTPLFVR--LG-----RRKPAQGSFLRGIRFEQIHATGA 371
Query: 376 QQSGLIQGLKNSPFTGICLSNINLQ 400
+ I GL + P + ++N + +
Sbjct: 372 LLTSSITGLPDMPVEDVVIANSSFR 396
>gi|361068129|gb|AEW08376.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
Length = 138
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 99/137 (72%), Gaps = 1/137 (0%)
Query: 254 SGWDEYGIAYGHPSSGITIRRVTGSS-PFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 312
SGWDEYGI YG PSS I IRRV G + SG+++GSE SGG++ V A+ I ++N G+
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGQTHTSSGLSLGSEMSGGIKGVHAQDIQIFNSRRGLR 60
Query: 313 VKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWG 372
+KT GRGG+++++ +S+V M+N GI G GDHPDD+++PNALP + IT KD+ G
Sbjct: 61 IKTAPGRGGYVKDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDIIG 120
Query: 373 TKVQQSGLIQGLKNSPF 389
+++ +G ++G++N+PF
Sbjct: 121 DEIKTAGSVEGIQNAPF 137
>gi|293370401|ref|ZP_06616955.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|292634549|gb|EFF53084.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
Length = 525
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 112/417 (26%), Positives = 179/417 (42%), Gaps = 57/417 (13%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+++I DFG +G TLNT+A AI + GG + +P G++LTG L S++ L+
Sbjct: 58 QVNICDFGAKSNGVTLNTEAINNAIKAVHD---KGGGKVVIPEGLWLTGPIVLQSNVNLH 114
Query: 98 LAKGAVIKATQDTWNWPLI-------------APLPSY--------GRGRERPGGRYMSF 136
K A+I + DT +P+I +P+ + G G G
Sbjct: 115 AEKNALIVFSSDTSLYPIITTSFEGLDVKRCQSPISAMNAENIAITGYGVFDGAGDRWRP 174
Query: 137 IHGDGLQDVV---ITGENGTIDGQGAIWW------------------------NMWRQRT 169
+ D + D + G +D G +W+ W
Sbjct: 175 VKKDKMTDRQWKNLVNSGGKVDENGKVWYPNEGALKASVLMAGSEDKRTEITSEEWEDMK 234
Query: 170 LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 229
+ RP L+ + S+ I++ V F+NSP W +HP+ C ++++ V + P S N D +D
Sbjct: 235 -SWLRPVLLSIVKSKKILLEGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYSQNGDALD 293
Query: 230 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 289
+S NV I + + GDD + +KSG DE G G P + +R T G +GSE
Sbjct: 294 VESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRNNTVLHGHGGFVIGSE 353
Query: 290 TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG---DV 346
SGGV+NV + VG+ K+ GRGG + NI ++++ M + IA V
Sbjct: 354 MSGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDALIADLYYAV 413
Query: 347 GDHPDDKFN--PNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 401
P + P I I DV+ ++ + GL P I + N+ + G
Sbjct: 414 KSAPGEPVPSVSEETPAFRNIYISDVFCRGAGRAAYLNGLPEMPIENISIKNMVVTG 470
>gi|255523559|ref|ZP_05390527.1| glycoside hydrolase family 28 [Clostridium carboxidivorans P7]
gi|296186479|ref|ZP_06854882.1| polygalacturonase (pectinase) [Clostridium carboxidivorans P7]
gi|255512816|gb|EET89088.1| glycoside hydrolase family 28 [Clostridium carboxidivorans P7]
gi|296048926|gb|EFG88357.1| polygalacturonase (pectinase) [Clostridium carboxidivorans P7]
Length = 532
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 179/402 (44%), Gaps = 45/402 (11%)
Query: 34 YRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSH 93
++N +ITD+G T NT AF++AI + GG + VP G +LTG L S+
Sbjct: 59 FQNKDFNITDYGAESGSITKNTDAFKKAI---TECNKVGGGRVVVPAGTWLTGPIELKSN 115
Query: 94 MTLYLAKGAVIKATQDTWNWPLIAPLPS-YGRGRER--PGGRYMSFIHGDGLQDVVITGE 150
+ LYL GA++ + + P Y + E+ Y + I G L ++ ITG+
Sbjct: 116 VNLYLDSGALV----------IFSSNPEDYKKTDEKNSSSNSYKNLISGSNLSNIAITGD 165
Query: 151 NGTIDGQGAIWW---------NMWR-------------------QRTLPFTRPNLIEFMN 182
G ++G GA W ++W+ ++ + RPNL+ N
Sbjct: 166 -GVLNGNGAFWRPVKKEKVTDSIWKSFVSAGGVLDSAGTTVWPNKQVVNVKRPNLLNLSN 224
Query: 183 SRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSY 242
+S+++ F+NSP +NI N+++R I + NTDGID + NV I +
Sbjct: 225 CKSVLLDGPSFENSPQFNIDINSSENLIVRNTKIFNEYWAQNTDGIDISACKNVLIYNDT 284
Query: 243 ISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHI 302
++TGDD + +KSG + I + G VGS T GG++N+ +
Sbjct: 285 VNTGDDGICMKSGSSSKSNNDEPTLENVVIENCIVNHAHGGFVVGSNTDGGMKNIYVHNC 344
Query: 303 NLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVV 362
N G+ K++IG GG + +I + + M+N + + + N +P
Sbjct: 345 NYIGTDSGLRFKSDIGNGGKVEDIYIDGINMKNIVNDAIVFDTNYEAKNTNNTSNKVPNF 404
Query: 363 NGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 404
I I +V+ Q++ I+GL P + L NI ++ G
Sbjct: 405 QNIHISNVFCDGAQEAANIKGLDAVPVKNLDLKNITIKSTNG 446
>gi|376338086|gb|AFB33588.1| hypothetical protein 2_7803_01, partial [Pinus mugo]
Length = 138
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 67/137 (48%), Positives = 98/137 (71%), Gaps = 1/137 (0%)
Query: 254 SGWDEYGIAYGHPSSGITIRRVTGSS-PFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 312
SGWDEYGI YG PSS I IRRV G + SG+A+GSE SGG++ V A+ I ++N G+
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGETHTSSGLALGSEMSGGIKGVHAQDIQIFNSRRGLR 60
Query: 313 VKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWG 372
+KT GRGG+++++ +S+V M+N GI G GDHPDD+++PNALP + IT KD+ G
Sbjct: 61 IKTAPGRGGYVKDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDIIG 120
Query: 373 TKVQQSGLIQGLKNSPF 389
+++ +G + G++N+PF
Sbjct: 121 DEIKTAGSVXGIQNAPF 137
>gi|430005219|emb|CCF21020.1| Polygalacturonase-like protein [Rhizobium sp.]
Length = 521
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 183/396 (46%), Gaps = 39/396 (9%)
Query: 54 NTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVI--KATQDTW 111
N A + AI + GGTL + PG + L S MTL+LA+GA + +++D+W
Sbjct: 108 NADALQAAIADLP----VGGTL-RIGPGRWTALPVTLRSDMTLHLAEGAELCSPSSRDSW 162
Query: 112 NWPLIAPLPS-----YGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAI--WWNM 164
+ + P G P + + +H G + +V+ G+ G +DG G WW
Sbjct: 163 S---VFPARDNAGHLLGSWEGEPAACFAAPLHAIGARRLVLEGK-GILDGAGNAGDWWGW 218
Query: 165 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 224
++ R + ++ + + +N+P W IHP C +V ++I AP DSPN
Sbjct: 219 AKETRDGARRARGLHLIDCSDVTLFGFTIRNAPSWIIHPQGCHRLVAACLSIEAPHDSPN 278
Query: 225 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG----IAYGHPSSGITIRRVTGSSP 280
TDG +P+ SS + +E + GDD +A+K+G + G A+ + + IR
Sbjct: 279 TDGFNPEGSSEIRVEGVRFTVGDDCIAIKAG--KRGPCGEAAHLRETRDVQIRHCLMERG 336
Query: 281 FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 340
G+ +GSE SGGV +VL E + G+ +KT GRGG + IT+ V ME
Sbjct: 337 HGGVVIGSEMSGGVHDVLVEDCEMIGTDRGLRLKTRRGRGGSVSGITMRRVRMEGVLTAF 396
Query: 341 KIAGDVGDHPD--DKF----NPNAL----PVVNGITIKDVWGTKVQQS-GLIQGLKNSPF 389
PD D++ P AL P ++GI ++D+ +V + G GL +P
Sbjct: 397 SANAHYHCDPDGHDEWVQSRQPAALDEGTPEIDGIAVEDIDLHEVGHAVGAFLGLPEAPI 456
Query: 390 TGICLSNINLQGV---AGPTSPPLKCSDVSGSAYQV 422
+ + N+ + A P +PP+ V +++
Sbjct: 457 RNVSIRNLRVHSFDPEAAP-APPIMADGVQAMRHEM 491
>gi|347531917|ref|YP_004838680.1| glycoside hydrolase family protein [Roseburia hominis A2-183]
gi|345502065|gb|AEN96748.1| glycoside hydrolase family 28 [Roseburia hominis A2-183]
Length = 518
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/310 (31%), Positives = 148/310 (47%), Gaps = 20/310 (6%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+++ FG GDG + +T + AI R + +P G Y S L S +++ L
Sbjct: 83 LNVRKFGAKGDGVSDDTTFIQAAIMACPPESR-----VLIPAGTYKITSLFLKSGISVEL 137
Query: 99 AKGAVIKATQDTWNWPLIAPL-PSY--------GRGRERPGGRYMSFIHGDGLQDVVITG 149
AKGA + A D ++ ++ L SY G P + I G + DV + G
Sbjct: 138 AKGAELLADTDRSHYAILPGLIESYDETGDYNLGTWEGNPLPMFAGIISGIDVSDVNLYG 197
Query: 150 ENGTIDGQGAI--WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCS 207
E G+I+G + WW + F RP ++ R+I + + F +SP W IHP +
Sbjct: 198 E-GSINGAASHENWWKNEKVMVGAF-RPRMLSLNRCRNIRVQGLYFHDSPAWVIHPYFSD 255
Query: 208 NVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPS 267
++ + + PA SPNTDG+DP+S +V I S GDD +AVKSG G Y PS
Sbjct: 256 ELLFCNLIVENPAKSPNTDGLDPESCRDVTICGVRFSLGDDCIAVKSGKIYMGRRYKTPS 315
Query: 268 SGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG--GFIRN 325
S I + + + VGSE +GGV N++ E Y+ G+ +KT GRG + N
Sbjct: 316 SNIHVYQCLMEHGHGAVTVGSEMAGGVNNLIVEKCRFYHTDRGLRIKTRRGRGKDAILDN 375
Query: 326 ITVSDVYMEN 335
I D+ ME
Sbjct: 376 IIFRDLMMEQ 385
>gi|295105134|emb|CBL02678.1| Endopolygalacturonase [Faecalibacterium prausnitzii SL3/3]
Length = 457
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 157/313 (50%), Gaps = 28/313 (8%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
S+T +G VGDG T + A + AI GG ++ Y + S L S++ L+L
Sbjct: 4 SVTKYGAVGDGATNDAAAIQSAIDACN--AAGGGRVVLEGGHTYYSSSIELKSNVELHLE 61
Query: 100 KGAVIKATQDTWNW-------PLIAPLPSYGRGRERPGGR-YMSFIHGDGLQDVVITGEN 151
+GA++KA D + +A + S + +RP + +FIH + ITG+
Sbjct: 62 QGALLKAHSDISTYFNPNGDDASVAAV-SGAKAVDRPVAKPAYTFIHAKDADNFSITGQ- 119
Query: 152 GTIDGQGAIWWNMWRQRTLPFT-----RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYC 206
G +DG ++ M R F RP ++ + I +V QNSPFW +HP C
Sbjct: 120 GAVDGN--VYAFMKRASRYYFNGDFYPRPTMVYVEHCNHISFHDVTLQNSPFWTLHPAGC 177
Query: 207 SNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVK--SGWDEYGIAYG 264
++V+I + +L P D N+DGIDPD S+NV I ++ DD + +K +G +EYG
Sbjct: 178 NDVLISNIRVLNPLDCTNSDGIDPDHSTNVRIIGCHVQCADDCICLKTTAGNNEYG---- 233
Query: 265 HPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 324
P+ + I T +S + I +G+E EN+L ++ + G+ ++ I GG +R
Sbjct: 234 -PTKNVIISNCTLTSTSAAIKIGTEGVADFENILVDNCIITGTNRGLSIQ--IRDGGCVR 290
Query: 325 NITVSDVYMENAR 337
N++ S++ +E R
Sbjct: 291 NVSFSNIMIETRR 303
>gi|280977865|gb|ACZ98650.1| polygalacturonase [Cellulosilyticum ruminicola]
Length = 518
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/310 (31%), Positives = 147/310 (47%), Gaps = 21/310 (6%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
++I DFG GDG++++ A + AI G + P G Y T L SH+T+ L
Sbjct: 81 LNIRDFGAKGDGESMDAAAIQAAIAAAPK-----GARIVFPAGTYRTTPIFLKSHITIEL 135
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRE----------RPGGRYMSFIHGDGLQDVVIT 148
+GA + + +P++ + E Y S + G G++DV I
Sbjct: 136 MEGATLLGHHERDAYPILPGKLTKEDDNENFYFLGTWEGEIAECYASLLTGIGVEDVRII 195
Query: 149 GENGTIDG--QGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYC 206
GE GT+DG Q WW + + + RP + + I++ + +NSP W +HP+
Sbjct: 196 GE-GTLDGNGQNGDWWINCKVKREAW-RPRSLYLLECHDILVEGITIKNSPSWTVHPIRS 253
Query: 207 SNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHP 266
S + +T+ P DSPNTDGIDP+S + V I S GDD +A+KSG + P
Sbjct: 254 SKLRFINLTLNNPKDSPNTDGIDPESCNGVEILGVKFSLGDDCIAIKSGKISIPLKERRP 313
Query: 267 SSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG--GFIR 324
S I IR + +GSE SGGV+NV E + G+ +KT GRG I
Sbjct: 314 SENIIIRNCLMQYGHGAVVLGSEMSGGVKNVFVERCFFEDTDRGLRIKTRRGRGNTAIID 373
Query: 325 NITVSDVYME 334
I V ++ M+
Sbjct: 374 QIYVKNIQMK 383
>gi|300728468|ref|ZP_07061828.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
gi|299774269|gb|EFI70901.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
Length = 466
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 157/334 (47%), Gaps = 52/334 (15%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+SI D GG GDG T NT+AFR+AI ++ L GG L VP G+YLTG + ++ L+L
Sbjct: 47 VSILDCGGKGDGITSNTEAFRKAISKLSKL---GGGHLNVPAGIYLTGLISFKDNIDLHL 103
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
K A+I ++D + I + PG I+ +++ ITGE G IDG G
Sbjct: 104 EKNAIIVFSEDKKEF--IKEENGVKDDKATPG------INASKRKNISITGE-GIIDGNG 154
Query: 159 AIW------------WNMWRQRT----------LPFT-----------------RPNLIE 179
W WN ++ PF R +LI
Sbjct: 155 EWWRPVKRSKVSNTEWNDFKAMGGTESAKGDLWYPFNLKHFDNIAATPEAQEKMRTHLIR 214
Query: 180 FMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIE 239
+ +++I V +NSP ++I P C NV+I VT+ P ++ N D ID + +NV I
Sbjct: 215 LTDCENVLIQGVTVENSPKFHIVPQRCKNVIIDGVTVRCPWNAQNGDAIDIGNCTNVLIV 274
Query: 240 DSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLA 299
++ I GDD + +K G + YG P I I+ G +GSE SGG++N+
Sbjct: 275 NNVIDAGDDGICMKGGAGAKALEYG-PCLNINIQDNIVYHAHGGFVIGSEFSGGMKNIYV 333
Query: 300 EHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
+ + K+++GRGG +I +S++YM
Sbjct: 334 HNNTFSGTDTELRFKSSVGRGGTTEDIYISNIYM 367
>gi|356494975|ref|XP_003516356.1| PREDICTED: uncharacterized protein LOC100783583 [Glycine max]
Length = 1470
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/115 (57%), Positives = 81/115 (70%)
Query: 119 LPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLI 178
L SYGRGR+ P GR+ S I G L DV+ITG NGTIDGQG WW+ + + L TRP +I
Sbjct: 1075 LYSYGRGRDAPDGRFSSLIFGTNLTDVIITGYNGTIDGQGCYWWDKFHKGELKLTRPYMI 1134
Query: 179 EFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 233
E M S I ISN+ NSP W +HP+Y S+++I+ +TILAP DSPNTDGIDP S
Sbjct: 1135 EIMFSDHIQISNLTLINSPSWFVHPIYTSDIIIQGLTILAPVDSPNTDGIDPGDS 1189
>gi|313114438|ref|ZP_07799963.1| polygalacturonase [Faecalibacterium cf. prausnitzii KLE1255]
gi|310623236|gb|EFQ06666.1| polygalacturonase [Faecalibacterium cf. prausnitzii KLE1255]
Length = 510
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 178/386 (46%), Gaps = 33/386 (8%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+ + +G V DG T NT + A+ GGT+ YVP G Y T S L S+ TLYL
Sbjct: 74 VDASRYGLVADGTTDNTLKLQAALSTCP----KGGTV-YVPAGRYRTCSLFLKSNTTLYL 128
Query: 99 AKGAVIKATQDTWNWPLI-APLPSYGRGRE--------RPGGRYMSFIHGDGLQDVVITG 149
KGAV+ D ++P++ +PS E P + ++ + DVV+TG
Sbjct: 129 EKGAVLLGDNDRTHYPILPGVIPSENEVDEYYLTGWEGNPLDSFAGLLNITQVHDVVVTG 188
Query: 150 ENGTID--GQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCS 207
E GT+D + WW + + + + RP + ++S +I + + QNS W IHP++
Sbjct: 189 E-GTLDCDAENGDWWVTPKIKRIAW-RPRAVAAVDSENICLHGITVQNSYSWTIHPIFVK 246
Query: 208 NVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPS 267
++ + I P ++PNTDGIDP+S + I I GDD +A+K+ G+
Sbjct: 247 HLDLLNFNINNPYNAPNTDGIDPESCEYIRIIGVNIHVGDDCIAMKASKVFLGMKLKKSC 306
Query: 268 SGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG--GFIRN 325
IR GI +GSE SGGV++++ + + G+ VKT GRG I
Sbjct: 307 EHTVIRNCLLDKGHGGIVIGSEMSGGVKDMVVTQCLMDHTDRGLRVKTRRGRGNTAVIDG 366
Query: 326 ITVSDVYMENARKGIKIAGDVGDHPDDKFNP-----NALPV------VNGITIKDVWGTK 374
+ +V M + I PD P +A+PV + +T++D+ T
Sbjct: 367 LVFRNVEMRGVKAPFVINMFYFCDPDGH-GPYVQCRDAMPVDEYTPKLGSLTMEDIVATD 425
Query: 375 VQQSGL-IQGLKNSPFTGICLSNINL 399
Q +G GL P + + N+ +
Sbjct: 426 AQFAGCYFDGLPEQPIERVSMKNVTI 451
>gi|325106411|ref|YP_004276065.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975259|gb|ADY54243.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 476
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 175/354 (49%), Gaps = 31/354 (8%)
Query: 1 MFRFLVTLSILLSYFNCFSLASVVTCSGIVPMRYRND-----KISITDFGGVGDGKTLNT 55
+F+ + LS++++Y F+ ++ + I + + ++ +G GDGKTLNT
Sbjct: 6 IFKLFLCLSLVINY--AFAQSNEIKFDWIDKVGAKKAPEGKGMFNVAKYGAKGDGKTLNT 63
Query: 56 KAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPL 115
++AI + GG ++ PG YLTGS + + L + KG I +QD ++ +
Sbjct: 64 NTIQKAI---DDCAKKGGGIVVFNPGEYLTGSVFVKKGVNLRIDKGVTILGSQDIKDYKV 120
Query: 116 IAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMW---RQRTLP- 171
I + G E P + I+ +D +I+G+ G I+ QG ++W+ + R+ P
Sbjct: 121 IDTRVA-GIEMEWPA----ALINVLDQEDAMISGK-GLINAQGKVFWDYYWNLRKEYEPK 174
Query: 172 ---------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL--APA 220
RP I NS+++ I ++ Q + FW + VY S V + +TI
Sbjct: 175 GLRWIIDYDARRPRTILVSNSKNVTIKDLNIQQAGFWTVQVVYSSYVTVDGLTINNNVGG 234
Query: 221 DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP 280
P+TDG+D DSSS + ++++ I DD +K+G D G+ P + IR
Sbjct: 235 HGPSTDGVDIDSSSWILVQNTDIDCNDDNFCIKAGRDADGLRVNRPCEYVVIRDCVARKG 294
Query: 281 FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYME 334
+ +GSETSGG+ N+ A +I +++K+ + RGGF+ N+ + +V M+
Sbjct: 295 GGLLTLGSETSGGIRNIYASNIKGMATSNCLNIKSAVTRGGFVENVLLENVTMD 348
>gi|160943445|ref|ZP_02090679.1| hypothetical protein FAEPRAM212_00936 [Faecalibacterium prausnitzii
M21/2]
gi|158445305|gb|EDP22308.1| polygalacturonase (pectinase) [Faecalibacterium prausnitzii M21/2]
Length = 457
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/314 (30%), Positives = 159/314 (50%), Gaps = 30/314 (9%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPG-VYLTGSFNLTSHMTLYL 98
S+T +G VGDG T + A + AI +GG + + G Y + S L S++ L+L
Sbjct: 4 SVTKYGAVGDGATNDAAAIQSAI---DACNAAGGGRVVLEGGHTYYSSSIELKSNVELHL 60
Query: 99 AKGAVIKATQDTWNW-------PLIAPLPSYGRGRERPGGR-YMSFIHGDGLQDVVITGE 150
+GA++KA D + +A + S + +RP + +FIH + ITG+
Sbjct: 61 EQGALLKAHSDISTYFNPNGDDASVAAV-SGAKAVDRPVAKPAYTFIHAKDADNFSITGQ 119
Query: 151 NGTIDGQGAIWWNMWRQRTLPFT-----RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVY 205
G +DG ++ M R F RP ++ + I +V QNSPFW +HP
Sbjct: 120 -GAVDGN--VYAFMKRASRYYFNGDFYPRPTMVYVEHCNHISFHDVTLQNSPFWTLHPAG 176
Query: 206 CSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVK--SGWDEYGIAY 263
C++V+I + +L P D N+DGIDPD S+NV I ++ DD + +K +G +EYG
Sbjct: 177 CNDVLISNIRVLNPLDCTNSDGIDPDHSTNVRIIGCHVQCADDCICLKTTAGNNEYG--- 233
Query: 264 GHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFI 323
P+ + I T +S + I +G+E EN+L ++ + G+ ++ I GG +
Sbjct: 234 --PTKNVIISNCTLTSTSAAIKIGTEGVADFENILVDNCIITGSNRGLSIQ--IRDGGCV 289
Query: 324 RNITVSDVYMENAR 337
RN++ S++ +E R
Sbjct: 290 RNVSFSNIMIETRR 303
>gi|313236094|emb|CBY11419.1| unnamed protein product [Oikopleura dioica]
Length = 204
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 117/202 (57%), Gaps = 12/202 (5%)
Query: 100 KGAVIKATQDTWNWPLIAPLPSYGRGRE----RPGGRYMSFIHGDGLQDVVITGENGTID 155
KG I A+ + ++ ++ LPSY R+ Y S +G+ +++VV TGE G I+
Sbjct: 5 KGCEIIASANEDDYQIMPTLPSYCIARDGLAASKDALYRSVFYGEYVENVVFTGE-GLIN 63
Query: 156 GQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVT 215
G+G WW + L F RP L + + ++ I + ++NSPFW IH VY N+ I V
Sbjct: 64 GEGENWWTR-NSQNLKFERPRLFQCLFCKNFKIEKLTWKNSPFWTIHFVYSENIEIADVA 122
Query: 216 ILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRV 275
ILA +S NTDGID DSSSNV I D +I GDD++A+KSG+D G +G P+ + +
Sbjct: 123 ILAEHESRNTDGIDIDSSSNVHIHDVFIDVGDDVIALKSGFDFCGREFGMPTKNVLVE-- 180
Query: 276 TGSSPF--SGIAVGSETSGGVE 295
+S F A+GSE SGGV+
Sbjct: 181 --NSVFINENFAIGSEMSGGVQ 200
>gi|408376656|ref|ZP_11174260.1| Polygalacturonase [Agrobacterium albertimagni AOL15]
gi|407749346|gb|EKF60858.1| Polygalacturonase [Agrobacterium albertimagni AOL15]
Length = 503
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 179/393 (45%), Gaps = 26/393 (6%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+ I D G D NT A + AI + +GGTL +P G + +G L S MTL +
Sbjct: 86 VDIRDHGARPDSND-NTTAIQSAIAAVP----AGGTL-RLPAGSWTSGPLFLKSDMTLLI 139
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGR----YMSFIHGDGLQDVVITGENGTI 154
+GAV++ + +++ GR G + S ++ ++ I G+ G +
Sbjct: 140 EEGAVLQDSGTREGRRILSSRHPEGRVLGTWEGVAEACFASLLNAIDCDNLTICGQ-GIV 198
Query: 155 DGQG--AIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIR 212
DG G WW ++ RP + R + I+ + +NSP W +HPV C +V+
Sbjct: 199 DGGGDRGDWWTWPKETRDGARRPRTMFLSGCRHLTIAGITVRNSPSWTVHPVLCEDVLAV 258
Query: 213 YVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITI 272
+TI DSPNTDG++P+SS N+ + IS GDD VA+K+G + P+ + I
Sbjct: 259 GLTIRNHPDSPNTDGLNPESSQNIRLVGLDISVGDDCVAIKAGKRDPRGGPDRPTRNVEI 318
Query: 273 RRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVY 332
R + +GSE S G+ +V + + G+ +KT GRGG + I+V D
Sbjct: 319 RNCLMQRGHGAVVMGSEMSQGISDVSISRCHFFGTDRGLRIKTRRGRGGTVSKISVHDCR 378
Query: 333 MENARKGIKIAG----DVGDHPDDKFNPNALPV------VNGITIKDVWGTKVQQSGLI- 381
ME+ I + D D + ALPV + GI I+++ + + + +
Sbjct: 379 MEDVATPIAVNAFYFCDADGRSDYVQSRTALPVSLTTPKIEGIDIRNLEVSGAETAAAVF 438
Query: 382 QGLKNSPFTGICLSNINL--QGVAGPTSPPLKC 412
GL S + + +++ A P P + C
Sbjct: 439 YGLPESTIDAVSIDGMSIAYSADAKPAVPEMAC 471
>gi|372281193|ref|ZP_09517229.1| polygalacturonase-like protein [Oceanicola sp. S124]
Length = 861
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 158/361 (43%), Gaps = 26/361 (7%)
Query: 71 SGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGR----GR 126
GGTL VPPG + L + MTL+L +GA + A D WP++ P GR
Sbjct: 110 EGGTL-RVPPGRFAISPVFLKARMTLWLEEGAELCALHDRAGWPILPPRDDAGRVIGTWE 168
Query: 127 ERPGGRYMSFIHGDGLQDVVITGENGTIDGQG--AIWWNMWRQRTLPFTRPNLIEFMNSR 184
P + + + + ITG G +D G WW+ ++ RP + + +
Sbjct: 169 GLPEAAFAAPLTAIDCDGLTITG-LGILDAGGDRGDWWSWPKETRAGARRPRALFLAHGQ 227
Query: 185 SIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYIS 244
+ +S + +NSP W +HP + + I P DSPNTDG++P+S ++V + + S
Sbjct: 228 GVQLSGITVRNSPSWTVHPYRIDGLTCAGLKIQNPPDSPNTDGLNPESCTDVTLAGIHFS 287
Query: 245 TGDDLVAVKSGWDEYGIAYG-----HPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLA 299
GDD +AVKSG G G P+ + + G+ +GSE SG + +V
Sbjct: 288 VGDDCIAVKSGKRGTGALKGLAGHLAPTRRLHVHHCLMERGHGGMVLGSEMSGDITDVTV 347
Query: 300 EHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNP--- 356
G+ +KT GRGG + + SDV M+ + I PD +
Sbjct: 348 TACEFIGTDRGLRIKTRRGRGGEVARVHFSDVLMQGVGTPLAINAFYYCDPDGRSPEVQS 407
Query: 357 -------NALPVVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINLQGVAGPTSP 408
P ++ IT DV T V + + GL +P TG+ L N + P++P
Sbjct: 408 RSPAPVDETTPKIHDITFSDVIATDVPVCAVAVLGLPEAPVTGVRLK--NFRASLDPSAP 465
Query: 409 P 409
P
Sbjct: 466 P 466
>gi|376338082|gb|AFB33586.1| hypothetical protein 2_7803_01, partial [Pinus cembra]
Length = 138
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 97/137 (70%), Gaps = 1/137 (0%)
Query: 254 SGWDEYGIAYGHPSSGITIRRVTGSS-PFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 312
SGWDEYGI YG PSS I IRRV G + SG+A+GSE SGG++ V A+ + ++N G+
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGQTHTSSGLALGSEMSGGIQGVHAQDLQIFNSRRGLR 60
Query: 313 VKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWG 372
+KT GRGG++R++ +S+V M+N GI G GDHPDD+++PNAL + IT KD+ G
Sbjct: 61 IKTAPGRGGYVRDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALXDIQRITFKDIIG 120
Query: 373 TKVQQSGLIQGLKNSPF 389
+++ +G + G++N+PF
Sbjct: 121 DEIKTAGSVXGIQNAPF 137
>gi|386820345|ref|ZP_10107561.1| endopolygalacturonase [Joostella marina DSM 19592]
gi|386425451|gb|EIJ39281.1| endopolygalacturonase [Joostella marina DSM 19592]
Length = 514
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 184/388 (47%), Gaps = 52/388 (13%)
Query: 41 ITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAK 100
+ DFGG+GDGKT+NT+A ++AI + +GG + PG YL+GS + ++ + K
Sbjct: 85 VNDFGGIGDGKTINTEAIQKAIDKCAE---NGGGTIAFKPGTYLSGSIFIKKNIHFKIGK 141
Query: 101 GAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYM----SFIHGDGLQDVVITGENGTIDG 156
I +QD + Y R G M + I+ ++V+I GE G IDG
Sbjct: 142 NVTILGSQD---------INDYKEIDTRVAGIEMKWPAALINVSNQENVIIDGE-GLIDG 191
Query: 157 QGAIWWNM-WRQRTLPF-------------TRPNLIEFMNSRSIIISNVIFQNSPFWNIH 202
QG ++W+ W R + RP I +S++I + ++ Q + FW +H
Sbjct: 192 QGKVFWDYYWDLRKNEYEPKGLRWIVDYDAKRPRTILISDSKNIALKDLNIQKAGFWTVH 251
Query: 203 PVYCSNVVIRYVTILAP--ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 260
+Y + + + I P+TDGID DSS V I++ I DD +K+G D G
Sbjct: 252 VLYSEKITVDGLIIKNNIGGHGPSTDGIDIDSSKWVLIQNCDIDCNDDNFCLKAGRDWDG 311
Query: 261 IAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 320
P+ + IR +GSET+G + +V +I G+++K+ + RG
Sbjct: 312 QRVNRPTEYVVIRNCIARKGAGLFTLGSETAGSIRHVYVSNIKGLGTSNGLNIKSALTRG 371
Query: 321 GFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNP----NALPVVNGITIKDV---WGT 373
G + +I++ ++ M++ + +KI+ + +NP + LP G I + W
Sbjct: 372 GTVEDISLQNIQMDSVKTFVKISMN--------WNPSYSYSKLP--EGYDIDSIPIHWKK 421
Query: 374 KVQQSGLIQGLKNSPFTGICLSNINLQG 401
+++ +G+ F I LSNI+++G
Sbjct: 422 LLKEVPASKGI--PTFKNISLSNIDVKG 447
>gi|323452523|gb|EGB08397.1| hypothetical protein AURANDRAFT_26417 [Aureococcus anophagefferens]
Length = 460
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 124/432 (28%), Positives = 188/432 (43%), Gaps = 50/432 (11%)
Query: 41 ITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYL-TGSFNLTSHMTLYLA 99
+ +G V DG T + FR AI R +GG + G +L G +L ++ LY+A
Sbjct: 38 VHHYGAVPDGSTDALEGFRLAI---AAARDAGGGRVVAKGGTFLLRGGLDLYDNVQLYVA 94
Query: 100 KGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGE---NGTIDG 156
K ++ D + L A L + G E Y I ++V + G N +DG
Sbjct: 95 KRTTLRWAADRTGF-LPAVLTKF-EGTEL--FNYHPLIRAFEAENVSVVGADPANSVLDG 150
Query: 157 QGAIW-----WNMWRQRTLPFTR--------------PNLIEFMNSRSIIISNVIFQNSP 197
G W + + R L + P+ ++ R + ++N N+P
Sbjct: 151 GGDGWPLKAPKDAKKLRELGASNAPVEARQFGGKGLPPSFVQPFRCRRVSLANFSLVNAP 210
Query: 198 FWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWD 257
FW +HPVY NV +R + + D PNTDG+DP++ +V +E+ IS GDD VA+K+G D
Sbjct: 211 FWAVHPVYSENVWVRNLRVNTSWDRPNTDGVDPEACKDVLVENCVISAGDDAVALKTGRD 270
Query: 258 EYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNI 317
G G S I +RR +S F+GI VGSE SGGV+NV + I VK+N
Sbjct: 271 ADGWRVGVASENIVVRRNVLASRFNGICVGSEVSGGVDNVFFLENRIERAFHAIFVKSNS 330
Query: 318 GRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDD-KFNPNALPVV-NGITIKDVWGTKV 375
RG F+R + V+ V K +AGD +D K A P KDV
Sbjct: 331 ERGSFVRYVHVAHV------KAYDLAGDCIHFTNDYKGVRGARPTTFEKFAFKDVICRSA 384
Query: 376 QQSGLIQGLKNSPFTGICLSNINLQGVA-----GPTSPPLKCSDVSGSAYQVKPWPCSEL 430
+ L SP + + ++ ++ P S P+ ++V+ W + L
Sbjct: 385 VFAIRATSLAASPIADVTIRDVIVKSTMRTTPDHPVSHPVAVANVAN-------WEVANL 437
Query: 431 SSSQQTGACSNH 442
+ Q SN
Sbjct: 438 RVNGQAVDLSNR 449
>gi|302671860|ref|YP_003831820.1| polygalacturonase Pgl28A [Butyrivibrio proteoclasticus B316]
gi|302396333|gb|ADL35238.1| polygalacturonase Pgl28A [Butyrivibrio proteoclasticus B316]
Length = 524
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 148/311 (47%), Gaps = 27/311 (8%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+ +T FG GDG T++T A + AI GT+ Y+P G YL L S MTL+L
Sbjct: 81 LDVTAFGAKGDGVTMDTAAIQAAICACP----KDGTV-YLPKGEYLVTPLFLKSDMTLWL 135
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRER------------PGGRYMSFIHGDGLQDVV 146
KGAVI D ++P+ LP R + P Y S I Q++
Sbjct: 136 DKGAVILGDTDRNHYPV---LPGMTRATDEKSEYNLGTWEGNPLNCYASLITAIDAQNLD 192
Query: 147 ITGENGTIDGQG--AIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPV 204
I G GTIDG + WW + + + RP + + + + + NV QNSP W +HP
Sbjct: 193 IIGP-GTIDGNAGNSDWWVNAKVKRGAW-RPFAMYLVRCQKVRVQNVRVQNSPCWTVHPY 250
Query: 205 YCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYG 264
Y ++ + I P+DSPNTDG+DP+S NV + + IS GDD +A+KSG + +
Sbjct: 251 YSDDLAFLNLYIHNPSDSPNTDGLDPESCKNVLVAGTTISVGDDCMAIKSGKFYMSMEHH 310
Query: 265 HPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 324
+ I IR + VGSE +GGV+NV G+ +KT GRG
Sbjct: 311 KVTENIIIRNCRFERGHGSVTVGSEVAGGVKNVRVTQCIFDGTDRGLRIKTRRGRG---E 367
Query: 325 NITVSDVYMEN 335
+ D+ EN
Sbjct: 368 RSVLDDILFEN 378
>gi|257883313|ref|ZP_05662966.1| glycoside hydrolase [Enterococcus faecium 1,231,502]
gi|294622163|ref|ZP_06701235.1| glycoside hydrolase, family 28 [Enterococcus faecium U0317]
gi|424791207|ref|ZP_18217685.1| polygalacturonase [Enterococcus faecium V689]
gi|424796702|ref|ZP_18222393.1| polygalacturonase [Enterococcus faecium S447]
gi|424949498|ref|ZP_18365166.1| polygalacturonase [Enterococcus faecium R496]
gi|424953671|ref|ZP_18368620.1| polygalacturonase [Enterococcus faecium R494]
gi|424956677|ref|ZP_18371442.1| polygalacturonase [Enterococcus faecium R446]
gi|424968089|ref|ZP_18381747.1| polygalacturonase [Enterococcus faecium P1140]
gi|424994453|ref|ZP_18406390.1| polygalacturonase [Enterococcus faecium ERV168]
gi|424998615|ref|ZP_18410289.1| polygalacturonase [Enterococcus faecium ERV165]
gi|425001111|ref|ZP_18412641.1| polygalacturonase [Enterococcus faecium ERV161]
gi|425005192|ref|ZP_18416457.1| polygalacturonase [Enterococcus faecium ERV102]
gi|425011657|ref|ZP_18422540.1| polygalacturonase [Enterococcus faecium E422]
gi|425017825|ref|ZP_18428310.1| polygalacturonase [Enterococcus faecium C621]
gi|425032265|ref|ZP_18437333.1| polygalacturonase [Enterococcus faecium 515]
gi|425039363|ref|ZP_18443906.1| polygalacturonase [Enterococcus faecium 513]
gi|427397514|ref|ZP_18889996.1| hypothetical protein HMPREF9307_02172 [Enterococcus durans
FB129-CNAB-4]
gi|430860949|ref|ZP_19478544.1| glycosyl hydrolase [Enterococcus faecium E1573]
gi|430968697|ref|ZP_19487858.1| glycosyl hydrolase [Enterococcus faecium E1576]
gi|431017550|ref|ZP_19490427.1| glycosyl hydrolase [Enterococcus faecium E1578]
gi|431261224|ref|ZP_19505721.1| glycosyl hydrolase [Enterococcus faecium E1623]
gi|431777891|ref|ZP_19566132.1| glycosyl hydrolase [Enterococcus faecium E2560]
gi|431783620|ref|ZP_19571718.1| glycosyl hydrolase [Enterococcus faecium E6012]
gi|431786792|ref|ZP_19574790.1| glycosyl hydrolase [Enterococcus faecium E6045]
gi|447913735|ref|YP_007395147.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
gi|257818971|gb|EEV46299.1| glycoside hydrolase [Enterococcus faecium 1,231,502]
gi|291598332|gb|EFF29421.1| glycoside hydrolase, family 28 [Enterococcus faecium U0317]
gi|402919873|gb|EJX40434.1| polygalacturonase [Enterococcus faecium V689]
gi|402922629|gb|EJX42990.1| polygalacturonase [Enterococcus faecium S447]
gi|402934203|gb|EJX53573.1| polygalacturonase [Enterococcus faecium R496]
gi|402938575|gb|EJX57571.1| polygalacturonase [Enterococcus faecium R494]
gi|402945373|gb|EJX63728.1| polygalacturonase [Enterococcus faecium R446]
gi|402952951|gb|EJX70715.1| polygalacturonase [Enterococcus faecium P1140]
gi|402980028|gb|EJX95661.1| polygalacturonase [Enterococcus faecium ERV168]
gi|402982462|gb|EJX97925.1| polygalacturonase [Enterococcus faecium ERV165]
gi|402987164|gb|EJY02253.1| polygalacturonase [Enterococcus faecium ERV102]
gi|402987438|gb|EJY02501.1| polygalacturonase [Enterococcus faecium ERV161]
gi|402995993|gb|EJY10403.1| polygalacturonase [Enterococcus faecium E422]
gi|403003651|gb|EJY17535.1| polygalacturonase [Enterococcus faecium C621]
gi|403013574|gb|EJY26660.1| polygalacturonase [Enterococcus faecium 515]
gi|403016109|gb|EJY28944.1| polygalacturonase [Enterococcus faecium 513]
gi|425722190|gb|EKU85087.1| hypothetical protein HMPREF9307_02172 [Enterococcus durans
FB129-CNAB-4]
gi|430551267|gb|ELA91036.1| glycosyl hydrolase [Enterococcus faecium E1573]
gi|430554867|gb|ELA94435.1| glycosyl hydrolase [Enterococcus faecium E1576]
gi|430559249|gb|ELA98609.1| glycosyl hydrolase [Enterococcus faecium E1578]
gi|430576629|gb|ELB15266.1| glycosyl hydrolase [Enterococcus faecium E1623]
gi|430638495|gb|ELB74426.1| glycosyl hydrolase [Enterococcus faecium E2560]
gi|430644804|gb|ELB80385.1| glycosyl hydrolase [Enterococcus faecium E6012]
gi|430644943|gb|ELB80507.1| glycosyl hydrolase [Enterococcus faecium E6045]
gi|445189444|gb|AGE31086.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
Length = 436
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 140/281 (49%), Gaps = 35/281 (12%)
Query: 76 LYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYM- 134
+++P G+YL G+ L L +GAV+K D +P I R G M
Sbjct: 40 VFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPEIDT---------RVAGVEMK 90
Query: 135 ---SFIHGDGLQDVVITGENGTIDGQGAIWWNMW-------------RQRTL------PF 172
+ ++ +D++I G+ G IDGQG WW ++ Q+ L
Sbjct: 91 WPAAILNVLSAKDILIEGK-GIIDGQGDHWWELYWGKDQKSGTRAEYDQKGLRWIADYAI 149
Query: 173 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDS 232
RP ++ +++ ++IFQ S FWN+ Y ++V++ V I+ D P+TDGID DS
Sbjct: 150 KRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDS 208
Query: 233 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSG 292
S+NV + + ++ GDD +A+KSG D G SS I + R S + G+ +GSE S
Sbjct: 209 STNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGY-GVTIGSEVSA 267
Query: 293 GVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
GV +V IN + GI +K++ RGG I NI V ++ M
Sbjct: 268 GVSDVYIHDINFFQSDCGIRMKSSKERGGVIENIRVENLNM 308
>gi|281419687|ref|ZP_06250686.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
gi|281406216|gb|EFB36896.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
Length = 467
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 160/341 (46%), Gaps = 52/341 (15%)
Query: 37 DKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTL 96
+ +SI ++GG GDG T+NT+AF +AI + L + GG L VP G+YLTG +L ++ L
Sbjct: 44 NHVSILEYGGNGDGLTMNTQAFAKAISK---LNKMGGGHLNVPAGIYLTGLISLKDNIDL 100
Query: 97 YLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDG 156
+L K A+I ++D + I R P I+ +++ ITGE GTIDG
Sbjct: 101 HLEKNAIIVLSEDKNDHFKIDKTTGKKESRATPA------INASKRKNISITGE-GTIDG 153
Query: 157 QGAIWWN----------MWRQ-RTL------------PF-----------------TRPN 176
G WW W++ +T+ PF R +
Sbjct: 154 NGE-WWRPVKRSKVSDVEWKEFQTMGGTLNEKGDIWYPFNLKHKPNVAENMDEQEKNRTH 212
Query: 177 LIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNV 236
+I F + ++++ V NSP ++I P C NV+I +T+ P ++ N D ID S +V
Sbjct: 213 MIRFTSCENVLVQGVTLLNSPKFHIIPTRCKNVIIDGITVKCPWNAQNGDAIDISSCKDV 272
Query: 237 CIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVEN 296
I ++ I GDD + +K G P I I+ T G +GSE SGG++N
Sbjct: 273 LIVNNVIDAGDDGICMKGG-AGAAGVAAGPCENINIQDNTVYHAHGGFVIGSEFSGGMKN 331
Query: 297 VLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 337
++ + G+ K+ + RGG NI + +YM + +
Sbjct: 332 IVVRNNTFQGTDTGLRFKSAVKRGGTSENIYIDHIYMTDIK 372
>gi|374316328|ref|YP_005062756.1| endopolygalacturonase [Sphaerochaeta pleomorpha str. Grapes]
gi|359351972|gb|AEV29746.1| endopolygalacturonase [Sphaerochaeta pleomorpha str. Grapes]
Length = 454
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 105/366 (28%), Positives = 160/366 (43%), Gaps = 48/366 (13%)
Query: 73 GTLLYVPPGVYLTGSFNLTSH-MTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGG 131
G L + PG + TG ++ H + +++ K A I + + +P Y R
Sbjct: 33 GGCLSIGPGTWRTGPITISGHDIEVHIHKDAKIVFIPEEGKY-----IPVYSRWEGINCY 87
Query: 132 RYMSFIHGDGLQDVVITGENGTIDGQGAIWWNM--------------------------- 164
++ V I GE GT+ G G WW++
Sbjct: 88 CMHPCLYILNSHRVTIQGE-GTLYGSGHYWWDLSLGKRNLKMEPATETEKRFALLNPGYK 146
Query: 165 -----WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP 219
R F RP L++ +S I++ + ++SPFW +HP+Y N+V + ++I P
Sbjct: 147 SQGGGGGGRQSQFLRPPLVQVKDSSDILLEGITLEDSPFWTLHPLYSRNLVFKNLSIKNP 206
Query: 220 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS 279
++PNTDGID DS NV IE I GDD +A+KSG GI G P+ + I + T +
Sbjct: 207 KNAPNTDGIDLDSCENVTIEGCVIDVGDDGIALKSGSGPDGILTGRPTKDVRIFQCTVRN 266
Query: 280 PFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN--AR 337
G +GSET+ G+ NV + GI +KT GRGG I +++ + M
Sbjct: 267 AHGGAVIGSETAAGIHNVEVSNCLFDGTDRGIRIKTRRGRGGKISHLSFLGLKMVKNLCP 326
Query: 338 KGIKIAGDVGDHPDDKFNPNALPV------VNGITIKDVWGTKVQQS-GLIQGLKNSPFT 390
I + G ++ F+ LPV V+ I I D S I GL SP T
Sbjct: 327 LTINLYYRCGSFSNEDFSLEKLPVCPETPSVSDIRITDCEAVGCLSSIAFIVGLPESPIT 386
Query: 391 GICLSN 396
G+C+ +
Sbjct: 387 GLCIED 392
>gi|291459617|ref|ZP_06599007.1| polygalacturonase [Oribacterium sp. oral taxon 078 str. F0262]
gi|291417895|gb|EFE91614.1| polygalacturonase [Oribacterium sp. oral taxon 078 str. F0262]
Length = 526
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 119/395 (30%), Positives = 167/395 (42%), Gaps = 33/395 (8%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+ + FG +GDGK +T + AI GT+ +P G YLT L S ++L+L
Sbjct: 84 LDVRAFGALGDGKNDDTACIQAAIEACP----KDGTV-RIPKGRYLTRPLFLRSGLSLWL 138
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRE---------RPGGRYMSFIHGDGLQDVVITG 149
+GAV+ ++P + + G+ P Y S + G L++V I G
Sbjct: 139 DRGAVLLGDPSREHYPRLPGMTERSDGKGGFNLGSWEGDPETSYASLLTGIELRNVDIFG 198
Query: 150 ENGTIDGQG--AIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCS 207
E GT+DG + WW + + + RP I R I I V+ +NSP W IHP Y
Sbjct: 199 E-GTVDGNADRSDWWEEHKTKRGAW-RPRTIFLCRCRCIRIQGVLVRNSPSWTIHPYYTD 256
Query: 208 NVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPS 267
+ + VTI P DSPNTDG DP+S +V + IS GDD +A+KSG S
Sbjct: 257 GISLYNVTIWNPPDSPNTDGFDPESCEDVLLLGCRISVGDDCIAIKSGKARMAGERRKAS 316
Query: 268 SGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG--GFIRN 325
+R + +GSE + GV V A G+ +KT GRG F
Sbjct: 317 RNFALRNSILERGHGALTIGSEAAAGVYRVEASLCIFSGTDRGLRLKTRRGRGPDCFYDE 376
Query: 326 ITVSDVYMENARKGIKI----AGDVGDHPDDKFNPNALPVVNGIT--IKDVWGTKVQQSG 379
I + MEN D H + ALP VN +T I V ++ SG
Sbjct: 377 IYFHHIRMENVPMPFTFNMFYHCDADGHERYVQSQEALP-VNAMTPGIGAVRAENIRCSG 435
Query: 380 L------IQGLKNSPFTGICLSNINLQGVAGPTSP 408
+ GL P I L I+ + P P
Sbjct: 436 VDSALLCAYGLPERPIGAILLRGIDAVFLEDPERP 470
>gi|300770985|ref|ZP_07080862.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
gi|300762258|gb|EFK59077.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
Length = 481
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 113/437 (25%), Positives = 189/437 (43%), Gaps = 67/437 (15%)
Query: 43 DFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGA 102
DFG DGKT++TKA ++AI + GG + PG YLTGS + S + L++ +G
Sbjct: 57 DFGAREDGKTISTKAIQQAI---DACAKKGGGKVQFRPGKYLTGSVFIKSGVFLHVDEGV 113
Query: 103 VIKATQDTWNWPLIAPLPSYGRGRERPGGRYM----SFIHGDGLQDVVITGENGTIDGQG 158
+ +Q ++P I R G M + ++ +G Q I+G+ G I+GQG
Sbjct: 114 ELLGSQSLEDYPQI---------NTRVAGIEMIWPAALVNINGQQKAGISGK-GIINGQG 163
Query: 159 AIWWNM-WRQRT------------LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVY 205
+W+ W+ R+ RP + S III +V + + FW +H +Y
Sbjct: 164 KPFWDAYWKLRSEYDKKGLRWIVDYDAQRPRTVIVDGSEDIIIRDVTLKQAGFWTVHLLY 223
Query: 206 CSNVVI--RYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAY 263
S V + + P+TDGID DSS + I+++ I DD +KSG D G+
Sbjct: 224 SSYVTVDGIIIKNNINGIGPSTDGIDIDSSKWIRIQNADIDCNDDNFCIKSGRDWDGLRV 283
Query: 264 GHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFI 323
P+ + I I GSETSGG+ +++A ++ + VGI +K+ RGG +
Sbjct: 284 NRPTEYVLITDCISRKGDGLITFGSETSGGMRHIIARNLKAHGTKVGIRLKSARNRGGVV 343
Query: 324 RNITVSDVYMENARKGIKIA------------------GDVGDHPDDKFNP-----NALP 360
+I + ++ M++ R ++ V +H P +P
Sbjct: 344 EDILLENIQMDSVRTAFEVTPNWNPSYSYSKLPAGYDINKVPEHWKKMVTPVEPASKGIP 403
Query: 361 VVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY 420
I IK+V+ Q++ + GL+ +P L N+ + + +G
Sbjct: 404 TFQNIQIKNVFVKFAQRAINVDGLQENPLQKFSLENVAI------------TAKTAGVIR 451
Query: 421 QVKPWPCSELSSSQQTG 437
K W + + Q G
Sbjct: 452 HAKNWQLKNVKVTAQDG 468
>gi|365122655|ref|ZP_09339556.1| hypothetical protein HMPREF1033_02902 [Tannerella sp.
6_1_58FAA_CT1]
gi|363642403|gb|EHL81761.1| hypothetical protein HMPREF1033_02902 [Tannerella sp.
6_1_58FAA_CT1]
Length = 427
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 116/403 (28%), Positives = 190/403 (47%), Gaps = 53/403 (13%)
Query: 20 LASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVP 79
L+ +V+ I+ + S+TD+G NT A ++ I +GG + +P
Sbjct: 15 LSGIVSAQTILKPEIPETRFSVTDYGASASALD-NTVAIQKTI---DECSAAGGGSVIIP 70
Query: 80 PGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGG-------- 131
G ++ G + S++ L L G ++KA LP YG+G G
Sbjct: 71 AGTFMCGPIVMKSNINLVLDDGCILKA------------LP-YGKGNGIVEGSYPNNGKP 117
Query: 132 -RYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISN 190
RY I G +Q++ ++G+ G I+G G+ WW +R R LI F N R+I I
Sbjct: 118 DRYAHLISGKRVQNIKVSGK-GVIEGDGSAWWTAFRANR-SIKRGCLIRFDNCRNIEICG 175
Query: 191 VIFQNSPFWNIHPVY---CSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGD 247
+ QN+P N+H S++ +R +TI AP ++PN+DGID + NV I + I+ GD
Sbjct: 176 IRLQNAP--NVHITLGRGSSDITVRDITIEAPDEAPNSDGIDV-WAPNVLIYNCNIACGD 232
Query: 248 DLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNV 307
D +A+ SG + ITIR+ + G ++GS T+G +ENVL + + N
Sbjct: 233 DNIAMDSG-----------TKNITIRKCNFGNGH-GCSIGSYTAG-IENVLVDSCSFKNT 279
Query: 308 GVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVV----- 362
I +K+N RGG +NI S++ ++N RK I I P D +A V
Sbjct: 280 ESAIRMKSNRSRGGGEKNIIYSNITIDNVRKPIFITSYYPKTPKDVTEDSAEEVTVTTPS 339
Query: 363 -NGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 404
N I ++++ + +G+I G+ P + N+ ++ G
Sbjct: 340 WNNIFLRNIEIYDCEYAGIIWGVPELPIRNVVFDNVKIRATKG 382
>gi|315500573|ref|YP_004089375.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
gi|315418585|gb|ADU15224.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
Length = 476
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 178/405 (43%), Gaps = 52/405 (12%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+ DFG GDG T NT A + R + L + PG YLTGS L S M L L
Sbjct: 43 VRAEDFGARGDGVTRNTAALQ----RAIEAAAAQNATLVLAPGTYLTGSLFLKSGMALRL 98
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
KG + Q ++P++ + G E P + ++ DV I GE G IDG G
Sbjct: 99 DKGVTLVGEQTIESYPVMQTRIA---GIELPWPSALLNVYDQ--TDVRIYGE-GKIDGNG 152
Query: 159 AIWWNMWRQRTLPFT-------------RPNLIEFMNSRSIIISN------VIFQNSPFW 199
++W+ ++ + RP LI+ NS I + N + S FW
Sbjct: 153 KVFWDRFQSIRADYEARGLRWAADYDAQRPRLIQIYNSSRIELGNGPMAEPLQLARSGFW 212
Query: 200 NIHPVYCSNVVIRYVTILAPADS--PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWD 257
+ VY +V + +T+ D P+TDG+D DSS + +E + I DD + +K+G D
Sbjct: 213 TVQIVYSHDVKVSGITVRNNIDGKGPSTDGVDIDSSHTILVEHADIDANDDALCLKAGRD 272
Query: 258 EYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYN-VGVGIHVKTN 316
G+ P+ + IR T + ++G+ GSETSGG+ NV + + V GI K+
Sbjct: 273 ADGLRVNRPTENVVIRNSTIRAAYAGVTFGSETSGGIRNVRVHDLRVIGPVRYGILFKSA 332
Query: 317 IGRGGFIRNITVSDVYMENARKGIKI------AGDVGDHPDDKF--------------NP 356
RGG +I +SD+ + A GI+I A P+
Sbjct: 333 ATRGGGASDIDISDIDVAQAETGIRINLNWFPAYSYAKIPEGLTAYPAYWATLTAPVPRS 392
Query: 357 NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 401
LP V+ I I+ V ++ + ++ + P + I + ++ L+
Sbjct: 393 KGLPQVHNIRIRRVTAKGLKTAVDLEAYADVPLSNIQIEDVTLEA 437
>gi|322437669|ref|YP_004219759.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321165562|gb|ADW71265.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 482
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 118/404 (29%), Positives = 181/404 (44%), Gaps = 53/404 (13%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
++++ D G GDG T +T A + A+ R L GG + VP G YLTG+ + S+ L
Sbjct: 40 QVNVRDLGATGDGSTKDTVAMQLALDRCSVL---GGGEVLVPAGEYLTGALRIHSNTVLR 96
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
+ +GA + + D ++P GR G Y +FI ++V I G+ G I
Sbjct: 97 IEEGASLNGSPDIGDYPFTQ---VRWEGRWIKG--YSAFISAQDGENVTIIGK-GKIVAS 150
Query: 158 GAIWWNMWRQRTLP--FTRPN-----------------------LIEFMNSRSIIISNVI 192
AI + P +TRP L+EF + R++++ +V
Sbjct: 151 PAIKGRVVHADGSPMVYTRPAAGTAPNPDGPTNVARRDIMRNPALMEFTHCRNVLVQDVF 210
Query: 193 FQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAV 252
Q + W+ HPVYC NV R VT+ + A DGID DS V I+ T DD +++
Sbjct: 211 TQGNDMWSTHPVYCENVTFRNVTVHSGA-----DGIDVDSCKGVVIDGCEFVTRDDCISL 265
Query: 253 KSGWDEYGIAYGHPSSGITIRRVT-GSSPFSGIAVGSETSGGVENVLAEHINLYNVGV-G 310
KSG G G I I T + ++ I +GSETSGG+ NV EH
Sbjct: 266 KSGRGMEGNTIGVVCEDIHISNCTFNDAVWACIGIGSETSGGIRNVHVEHCKCLGARTFA 325
Query: 311 IHVKTNIGRGGFIRNITVSDVYMENARKG---IKIAGDVGDHPDDKFNPNALPVV----- 362
I++K+ GRG FI +I ++D+ + A++G I PD + +P +
Sbjct: 326 IYIKSRPGRGAFIEDIYMNDLEVSGAQQGFLRFNILNSGLQDPDPVPGDDGIPTIRNFHF 385
Query: 363 NGITIKDVW----GTKVQQSGLIQGLKNSPFTGICLSNINLQGV 402
+ I +KDV G + ++G + TG C I L +
Sbjct: 386 SNIRVKDVPVLVDGASIHPRKPLEGFSLTNVTGTCGKGIRLANI 429
>gi|329956871|ref|ZP_08297439.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328523628|gb|EGF50720.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 522
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 156/348 (44%), Gaps = 58/348 (16%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
++ I DFG DG+TLNT+A AI + GG + +P G++LTG L +++ L+
Sbjct: 57 QVDIRDFGAKADGETLNTEAINNAIKAVSE---KGGGKVVIPEGLWLTGPVVLQNNVNLH 113
Query: 98 LAKGAVIKATQDTWNWPLI-------------APLPSY--------------GRGRE-RP 129
+ K A++ + D +PL+ +P+ + G G RP
Sbjct: 114 VEKNALVLFSGDADLYPLVRTSFEGLDMLRCQSPISAMNAENIAITGHGVLDGSGDSWRP 173
Query: 130 -------GGRYMSFIHGDGLQDV---------------VITGENGTIDGQGAIWWNMWRQ 167
G++ S + G+ D ++TG + + W M R
Sbjct: 174 VKRNKMTDGQWKSLLKSGGVVDESGKVWYPNEGALKASILTGSKEKREISDSEWEGMKR- 232
Query: 168 RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDG 227
+ RP L+ + S+ +++ V F+NSP W +HP+ C ++ + V + P S N D
Sbjct: 233 ----WLRPVLLSIVKSKRVLLEGVTFRNSPSWCLHPLSCEDLTLNGVKVFNPWYSQNGDA 288
Query: 228 IDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVG 287
+D +S NV + +S GDD + +KSG + G G P + ++ T G VG
Sbjct: 289 LDVESCKNVVVTNSLFDAGDDAICIKSGKNADGRRRGEPCENVLVKNNTVLHGHGGFVVG 348
Query: 288 SETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 335
SE SGGV NV VG+ K+ GRGG + N+ V ++ M N
Sbjct: 349 SEMSGGVRNVYVADCTFIGTDVGLRFKSTRGRGGVVENVYVDNINMIN 396
>gi|431797010|ref|YP_007223914.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430787775|gb|AGA77904.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 455
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 182/399 (45%), Gaps = 45/399 (11%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+ ITDFG D + ++A AI +GG + +P G + TG +L S++ ++
Sbjct: 51 RFVITDFGAEEDDQQATSQAIVTAI---SAAVEAGGGRIVIPAGEWPTGKIHLKSNINIH 107
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
L +GA + ++D ++ + + + G E Y I+ +++ ITG+ G + +
Sbjct: 108 LEEGATLLFSEDPKDY--LPAVKTTWEGME--CFNYSPLIYAFDCENIAITGK-GELKAK 162
Query: 158 GAIW--W---------NMWRQRTLPFT----------------RPNLIEFMNSRSIIISN 190
W W ++ R L T RP I+F +++
Sbjct: 163 MNTWKVWFSRPKAHMESLKRLYNLAATDVPVEERNFVNDSSNFRPQFIQFNRCEKVLLEG 222
Query: 191 VIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLV 250
V NSPFW IHP +VVIR V + A N DG+DP+ S N+ IE+ GDD +
Sbjct: 223 VKITNSPFWVIHPFMSKDVVIRDVQVFAHGH--NNDGVDPEMSQNMLIENCIFDQGDDAI 280
Query: 251 AVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYN---V 307
AVKSG ++ P+ I IR + +A+GSE SGGVENV E+ + +
Sbjct: 281 AVKSGRNQDAWRLNMPTKNIVIRNSLVKNGHQLLAIGSELSGGVENVYMENCEVQEGAKL 340
Query: 308 GVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK-IAGDVGDHPDD---KFNPNALPVVN 363
++VKTN RGG++RN+ + ++ KG+ I DV D + P+ N
Sbjct: 341 NHLLYVKTNERRGGYVRNVHMKNIQCGKIDKGVLGIETDVLYQWRDLVPTYERRLTPIEN 400
Query: 364 GITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 402
I +++V V I+ SP + L NI ++ +
Sbjct: 401 -IYMENVRAADVAFVSRIKADPESPVEVVQLKNIQVESI 438
>gi|423241479|ref|ZP_17222592.1| hypothetical protein HMPREF1065_03215 [Bacteroides dorei
CL03T12C01]
gi|392641372|gb|EIY35149.1| hypothetical protein HMPREF1065_03215 [Bacteroides dorei
CL03T12C01]
Length = 463
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 118/414 (28%), Positives = 181/414 (43%), Gaps = 53/414 (12%)
Query: 29 IVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSF 88
IVP + ITD+ V D TL T A AI GG + +P G +LT
Sbjct: 40 IVPPVFPERSFVITDYHDVKD--TLYTNAINRAI---TICSEQGGGKVIIPDGEFLTAPI 94
Query: 89 NLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVIT 148
L S++ L+L+ V+K T D + + L+ R I+ G ++ IT
Sbjct: 95 RLKSNVNLHLSDSTVLKFTTDPFFFDLVQT-----RIEGIDCYNISPLIYAYGETNIAIT 149
Query: 149 GENGTIDGQG--AIWWNMWRQR----------------------TLPFT----------R 174
G NG +DGQ + W++ R R ++PF R
Sbjct: 150 G-NGVMDGQADSSNWFSENRIRGIVQEDGKKINEKTLLYEMKEDSIPFKERVFMRENGIR 208
Query: 175 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 234
P I ++I++ SPFW IHP+ N+ +R V + + N DG DP+S
Sbjct: 209 PQFINLYKCKNILLEGFTLNRSPFWLIHPLLSENITVRKVKM--QSHGYNNDGCDPESCR 266
Query: 235 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 294
NV IED TGDD +A+KSG DE G + PS I +R +G+A+GSE +GG
Sbjct: 267 NVLIEDCDFDTGDDCIAIKSGRDEDGRYWNIPSENIIVRHCRMKDGHAGVAIGSEVTGGC 326
Query: 295 ENVLAEHINLYNVGVG--IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDD 352
NV E+ + + + I +K+N RGG + NI + ++ + ++ I H DD
Sbjct: 327 RNVWVENCTMDSPELDRIIRIKSNAMRGGEVENIFIRNIRVGECKESILGFELKYWHVDD 386
Query: 353 KFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS-PFTGICLSNINLQGVAGP 405
P LP + I ++++ K Q + G ++ I + + GV P
Sbjct: 387 --GP-YLPYFHNIHLENITSKKSQYVLHLDGFEDKIQAQDIFVKDCTFDGVMKP 437
>gi|345513952|ref|ZP_08793467.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|423230893|ref|ZP_17217297.1| hypothetical protein HMPREF1063_03117 [Bacteroides dorei
CL02T00C15]
gi|423244604|ref|ZP_17225679.1| hypothetical protein HMPREF1064_01885 [Bacteroides dorei
CL02T12C06]
gi|229435766|gb|EEO45843.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|392630013|gb|EIY24015.1| hypothetical protein HMPREF1063_03117 [Bacteroides dorei
CL02T00C15]
gi|392641453|gb|EIY35229.1| hypothetical protein HMPREF1064_01885 [Bacteroides dorei
CL02T12C06]
Length = 463
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 118/414 (28%), Positives = 181/414 (43%), Gaps = 53/414 (12%)
Query: 29 IVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSF 88
IVP + ITD+ V D TL T A AI GG + +P G +LT
Sbjct: 40 IVPPVFPERSFVITDYHDVKD--TLYTNAINRAI---TICSEQGGGKVIIPDGEFLTAPI 94
Query: 89 NLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVIT 148
L S++ L+L+ V+K T D + + L+ R I+ G ++ IT
Sbjct: 95 RLKSNVNLHLSDSTVLKFTTDPFFFDLVQT-----RIEGIDCYNISPLIYAYGETNIAIT 149
Query: 149 GENGTIDGQG--AIWWNMWRQR----------------------TLPFT----------R 174
G NG +DGQ + W++ R R ++PF R
Sbjct: 150 G-NGVMDGQADSSNWFSENRIRGIVQEDGKKINEKTLLYEMKEDSIPFKERVFMRENGIR 208
Query: 175 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 234
P I ++I++ SPFW IHP+ N+ +R V + + N DG DP+S
Sbjct: 209 PQFINLYKCKNILLEGFTLNRSPFWLIHPLLSENITVRKVKM--QSHGYNNDGCDPESCR 266
Query: 235 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 294
NV IED TGDD +A+KSG DE G + PS I +R +G+A+GSE +GG
Sbjct: 267 NVLIEDCDFDTGDDCIAIKSGRDEDGRYWNIPSENIIVRHCRMKDGHAGVAIGSEVTGGC 326
Query: 295 ENVLAEHINLYNVGVG--IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDD 352
NV E+ + + + I +K+N RGG + NI + ++ + ++ I H DD
Sbjct: 327 RNVWVENCTMDSPELDRIIRIKSNAMRGGEVENIFIRNIRVGECKESILGFELKYWHVDD 386
Query: 353 KFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS-PFTGICLSNINLQGVAGP 405
P LP + I ++++ K Q + G ++ I + + GV P
Sbjct: 387 --GP-YLPYFHNIHLENITSKKSQYVLHLDGFEDKIQARDIFVKDCTFDGVMKP 437
>gi|266623864|ref|ZP_06116799.1| exo-poly-alpha-D-galacturonosidase [Clostridium hathewayi DSM
13479]
gi|288864322|gb|EFC96620.1| exo-poly-alpha-D-galacturonosidase [Clostridium hathewayi DSM
13479]
Length = 438
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 182/397 (45%), Gaps = 58/397 (14%)
Query: 50 GKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQD 109
G+ L T+A + I G +L + G YLT L + M + +GAV+K T D
Sbjct: 16 GERLVTEALQALIDETSQ----AGGILVLEKGTYLTAPLFLKNGMEFHFEEGAVLKGTTD 71
Query: 110 TWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMW---- 165
P+I P + G G + Y ++ +G +DV+I+G NGTIDGQG WW +
Sbjct: 72 ETKIPVI-PTRAAGIGMDW----YPGVLNCNGQKDVIISG-NGTIDGQGEYWWRKYWGDD 125
Query: 166 ---------RQRTLPFT------RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVV 210
++ L + R + M S I + ++ S FWNIH Y ++
Sbjct: 126 GKSGMRGEYDKKGLRWACDYDCMRVRNVVIMESSRITLKDITSMRSGFWNIHICYSDHIH 185
Query: 211 IRYVTILAPA-DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSG 269
+ + I + +SP+TDGID DS +V +E+ DD + +KSG D GI P
Sbjct: 186 VDGIKIASCGGESPSTDGIDIDSCHDVLVENCVTDCNDDSICIKSGRDADGIRVNRPCHD 245
Query: 270 ITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVS 329
IT++ + F G+ +GSE SGGV + +++ + G +K+++ R G+IR++ V
Sbjct: 246 ITVQNCEIRAGF-GVTIGSEVSGGVYQITLKNLRYHGTDCGFRIKSSVARHGYIRDVRVE 304
Query: 330 DVYMENARKGIKI-----------------AGDVGDHPDDKFN--PNALP--VVNGITIK 368
+ M N + G++ +H P+++P V+ ITI+
Sbjct: 305 GLSMVNVKYPFHFFLNWNPAYSYCELPGDYEGEIPEHWKKLLEAIPDSVPKTKVSNITIE 364
Query: 369 DVWGTK------VQQSGLIQGLKNSPFTGICLSNINL 399
+V + ++ I+G ++ P + N++L
Sbjct: 365 NVTARNEADYNGISRAFHIEGFEDQPVEHVIFKNVSL 401
>gi|359452816|ref|ZP_09242155.1| glycoside hydrolase, family 77 [Pseudoalteromonas sp. BSi20495]
gi|358050136|dbj|GAA78404.1| glycoside hydrolase, family 77 [Pseudoalteromonas sp. BSi20495]
Length = 489
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 116/436 (26%), Positives = 194/436 (44%), Gaps = 71/436 (16%)
Query: 18 FSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLY 77
+ +A + S VP + + +I DFG GD KT NT A AI + GG +
Sbjct: 43 WKMADAIKSSIKVP-SFPDKTFNIIDFGANGDNKTNNTVAINNAI---KSCNAQGGGQVI 98
Query: 78 VPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFI 137
+P G ++TG+ +L S++ L+L +GA++ + ++ + + + G E G Y I
Sbjct: 99 IPQGQFITGAIHLLSNVNLHLEEGAILSFSTSPEDY--LPAVFTRWEGLEMMG--YSPLI 154
Query: 138 HGDGLQDVVITGENGTIDGQG--AIWW-------------------NMWRQRTL------ 170
+ +++ ITG+ G ++G WW + Q+T
Sbjct: 155 YAFEQENIAITGK-GILEGNANNTTWWPWKGKHKEAHWELLTDNNGQIIEQKTARDKLMR 213
Query: 171 ----------------PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
+ RP I+ +++I + +NSPFW ++PV C++V + V
Sbjct: 214 DAEQHIPVEQRIYADGAYLRPPFIQPYRCNNVLIEGITIKNSPFWLVNPVLCNSVTVCDV 273
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
T + PN+DG DP+S ++V I++ TGDD +A+KSG + G S I I
Sbjct: 274 TF--SSHGPNSDGCDPESCNHVHIKNCVFDTGDDCIAIKSGRNADGRRVNTASQNIVIEN 331
Query: 275 VTGSSPFSGIAVGSETSGGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVY 332
G+ +GSE SGGV NV ++ + ++ I +KTN RGG I +I + ++
Sbjct: 332 CHMKEGHGGVVIGSEISGGVNNVFVQNCTMDSPHLERAIRIKTNSVRGGLIEHIRIRNIE 391
Query: 333 MENARKGIKI-----AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL-IQGLKN 386
+ + I I GD G +F+ P+V I I ++ V L + G
Sbjct: 392 VGTVKNAIVINFYYEEGDAG-----QFD----PIVRDIKIDNLHCKNVLSKALYLNGFAR 442
Query: 387 SPFTGICLSNINLQGV 402
P I L+N + V
Sbjct: 443 DPIKDITLTNSHFDQV 458
>gi|430824494|ref|ZP_19443051.1| glycosyl hydrolase [Enterococcus faecium E0120]
gi|430868568|ref|ZP_19482862.1| glycosyl hydrolase [Enterococcus faecium E1574]
gi|431744399|ref|ZP_19533267.1| glycosyl hydrolase [Enterococcus faecium E2071]
gi|430441022|gb|ELA51165.1| glycosyl hydrolase [Enterococcus faecium E0120]
gi|430548832|gb|ELA88680.1| glycosyl hydrolase [Enterococcus faecium E1574]
gi|430605142|gb|ELB42547.1| glycosyl hydrolase [Enterococcus faecium E2071]
Length = 436
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 140/281 (49%), Gaps = 35/281 (12%)
Query: 76 LYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYM- 134
+++P G+YL G+ L L +GAV+K D +P I R G M
Sbjct: 40 VFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPEIDT---------RVAGAEMK 90
Query: 135 ---SFIHGDGLQDVVITGENGTIDGQGAIWWNMW-------------RQRTL------PF 172
+ ++ +D++I G+ G IDGQG WW ++ Q+ L
Sbjct: 91 WPAAILNVLSAKDILIEGK-GIIDGQGDHWWELYWGKDQKSGTRAEYDQKGLRWIADYAI 149
Query: 173 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDS 232
RP ++ +++ ++IFQ S FWN+ Y ++V++ V I+ D P+TDGID DS
Sbjct: 150 KRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDS 208
Query: 233 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSG 292
S+NV + + ++ GDD +A+KSG D G SS I + R S + G+ +GSE S
Sbjct: 209 STNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGY-GVTIGSEVSA 267
Query: 293 GVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
GV +V I+ + GI +K++ RGG I NI V ++ M
Sbjct: 268 GVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNM 308
>gi|315650888|ref|ZP_07903931.1| pectin lyase [Lachnoanaerobaculum saburreum DSM 3986]
gi|315486867|gb|EFU77206.1| pectin lyase [Lachnoanaerobaculum saburreum DSM 3986]
Length = 360
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 142/277 (51%), Gaps = 18/277 (6%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+++ DFG GDG +++ + A+ + GT+ Y+P G YL L S++ L++
Sbjct: 83 LNVKDFGAAGDGVKIDSVCIQAAV----NACPKDGTV-YIPKGRYLCTPVFLKSNIDLWI 137
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRER---------PGGRYMSFIHGDGLQDVVITG 149
K AV+ +D +P++ + + P + + I G +++V+I G
Sbjct: 138 DKDAVLIGEKDRKKYPILPGMIESSDEKNEYNIGSWEGNPLDCFAALITGLSVENVLIYG 197
Query: 150 ENGTIDGQGAI--WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCS 207
E G +DG + WW +++ + + RPN + N ++I + + NSP W +HP Y
Sbjct: 198 E-GILDGNAGMLDWWKDAKKKNIAW-RPNTVFLHNCKNIAMQGLCIMNSPSWTLHPYYSD 255
Query: 208 NVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPS 267
N++ TI+ P +SPNTDG+DP+S NV I + IS GDD +A+KSG + + P+
Sbjct: 256 NLLFLNNTIMNPDNSPNTDGLDPESCENVLILGADISVGDDCIAIKSGKYYMALRHYKPA 315
Query: 268 SGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINL 304
I IR + +GSE + GV +V E++ L
Sbjct: 316 KNIVIRNSIFRKGHGSVTIGSEVAAGVYDVSVENVYL 352
>gi|261207238|ref|ZP_05921927.1| glycoside hydrolase, family 28 [Enterococcus faecium TC 6]
gi|289567178|ref|ZP_06447568.1| glycoside hydrolase, family 28 [Enterococcus faecium D344SRF]
gi|294614358|ref|ZP_06694275.1| glycoside hydrolase, family 28 [Enterococcus faecium E1636]
gi|430850287|ref|ZP_19468050.1| glycosyl hydrolase [Enterococcus faecium E1185]
gi|260078866|gb|EEW66568.1| glycoside hydrolase, family 28 [Enterococcus faecium TC 6]
gi|289161037|gb|EFD08947.1| glycoside hydrolase, family 28 [Enterococcus faecium D344SRF]
gi|291592830|gb|EFF24422.1| glycoside hydrolase, family 28 [Enterococcus faecium E1636]
gi|430535912|gb|ELA76303.1| glycosyl hydrolase [Enterococcus faecium E1185]
Length = 436
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 140/281 (49%), Gaps = 35/281 (12%)
Query: 76 LYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYM- 134
+++P G+YL G+ L L +GAV+K D +P I R G M
Sbjct: 40 VFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPEIDT---------RVAGVEMK 90
Query: 135 ---SFIHGDGLQDVVITGENGTIDGQGAIWWNMW-------------RQRTL------PF 172
+ ++ +D++I G+ G IDGQG WW ++ Q+ L
Sbjct: 91 WPAAILNVLSAKDILIEGK-GIIDGQGDHWWELYWGKDQKSGTRAEYDQKGLRWIADYAI 149
Query: 173 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDS 232
RP ++ +++ ++IFQ S FWN+ Y ++V++ V I+ D P+TDGID DS
Sbjct: 150 KRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDS 208
Query: 233 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSG 292
S+NV I + ++ GDD +A+KSG D G SS I + R S + G+ +GSE S
Sbjct: 209 STNVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGY-GVTIGSEVSA 267
Query: 293 GVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
GV +V I+ + GI +K++ RGG I NI V ++ M
Sbjct: 268 GVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNM 308
>gi|423106873|ref|ZP_17094568.1| hypothetical protein HMPREF9687_00119 [Klebsiella oxytoca 10-5243]
gi|376388999|gb|EHT01691.1| hypothetical protein HMPREF9687_00119 [Klebsiella oxytoca 10-5243]
Length = 460
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 122/413 (29%), Positives = 188/413 (45%), Gaps = 63/413 (15%)
Query: 37 DKI-SITDFGGVGD--GKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSH 93
DK+ IT +G G LNT A ++AI +GG + VP G +LT L ++
Sbjct: 33 DKVCDITHYGAEGHRLQIALNTDAIQKAI---DDCAAAGGGTVLVPKGNFLTNPLFLKNN 89
Query: 94 MTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRY-------MSFIHGDGLQDVV 146
+ L L K A + A+ + + RG ++ RY + FI Q+V
Sbjct: 90 IQLKLEKDATLVASTEVAAY----------RGDDKT--RYAEAENGWLPFISIADAQNVA 137
Query: 147 ITGENGTIDGQGAIWWNMWRQRTLPF------TRPNLIEFMNSRSIIISNVIFQNSPFWN 200
I GE GTIDGQGA+WW WR+ RP LI + +++I V +SP ++
Sbjct: 138 IVGE-GTIDGQGAVWWERWRENIRATGKKGGTDRPRLIYITRASNVLIDGVTLTHSPSFH 196
Query: 201 IHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 260
+ Y +V I IL+P +PNTD IDP S N+ I ++YI DD +A+K+ +
Sbjct: 197 VVTRYAHDVDINGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAIKAEKADPR 256
Query: 261 IAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 320
G I I T GI++GSE++GGV NVL E+ GI +K+ G+G
Sbjct: 257 FPDG-VVDNIYIANNTLKQG-RGISIGSESAGGVNNVLVENNTFEGSMYGIRIKSPRGKG 314
Query: 321 GFIRNITVSDVYMENAR--------------------KGIKIAG-DVGDH-------PDD 352
G ++NI S+ M N K ++ G +G+ P
Sbjct: 315 GEVKNIVYSNTRMHNVEVPLVFSAYYKAAPIVQAEVDKLLQAGGFTLGEQIYPPDSDPKQ 374
Query: 353 KFNPNALPVVNGITIKDVWGT-KVQQSGLIQGLKNSPFTGICLSNINLQGVAG 404
F+ P + IT++++ T + + I G +P +G SN+N++ G
Sbjct: 375 PFDKYKTPHFSNITVENLTSTGDSKAAAYIIGTPEAPLSGFHFSNVNIEADRG 427
>gi|418938241|ref|ZP_13491792.1| glycoside hydrolase family 28 [Rhizobium sp. PDO1-076]
gi|375055025|gb|EHS51309.1| glycoside hydrolase family 28 [Rhizobium sp. PDO1-076]
Length = 503
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 185/396 (46%), Gaps = 32/396 (8%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+ I DFG + N +A + AI I +GGTL +P G + +G L S+MTL +
Sbjct: 86 LDIRDFGASTESAD-NARAIQSAIAAIP----AGGTL-RLPAGSWSSGPVFLKSNMTLLI 139
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGR------GRERPGGRYMSFIHGDGLQDVVITGENG 152
+GAV+ T ++ + GR G P + S I+ Q++ ITG+ G
Sbjct: 140 EEGAVLADTGSRQGRKVLPARHADGRVLGTWEGVAEPC--FASLINAIDCQNLAITGQ-G 196
Query: 153 TIDGQG--AIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVV 210
TIDG G WW ++ RP I + R + +S + +NSP W IHPV C +V+
Sbjct: 197 TIDGGGDRGDWWTWPKETRDGARRPRTIFLSDCRHVTLSGITVRNSPSWTIHPVLCEHVL 256
Query: 211 IRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGI 270
+TI SPNTDG++P++SS++ + IS GDD +A+K+G + P+ +
Sbjct: 257 AVGLTIRNDPLSPNTDGLNPEASSDIRLIGLDISVGDDCIAIKAGKRDPRGGPDRPTRRV 316
Query: 271 TIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSD 330
IR + +GSE S G+ +V + G+ +KT GRGG + +I +S
Sbjct: 317 EIRNCLMQLGHGAVVMGSEMSRGIHDVSISRCHFVGTDRGLRIKTRRGRGGAVSDIHLSQ 376
Query: 331 VYMENARKGIKIAG----DVGDHPDDKFNPNALPV------VNGITIKDVWGTKVQQSGL 380
M+ I + D + + N LP+ ++ ITI+DV + + +
Sbjct: 377 CRMDGVATPIAVNAFYFCDADGRSEYVQSRNPLPLSIETPRISNITIRDVVVSGAETAAA 436
Query: 381 I-QGLKNSPFTGICLSNINL---QGVAGPTSPPLKC 412
+ GL + + +++ +G A P P + C
Sbjct: 437 VFYGLPECEIDAVSVDGLSIVYGEG-AKPGLPEMAC 471
>gi|293557205|ref|ZP_06675755.1| glycoside hydrolase, family 28 [Enterococcus faecium E1039]
gi|291600657|gb|EFF30959.1| glycoside hydrolase, family 28 [Enterococcus faecium E1039]
Length = 443
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 140/281 (49%), Gaps = 35/281 (12%)
Query: 76 LYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYM- 134
+++P G+YL G+ L L +GAV+K D +P I R G M
Sbjct: 47 VFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPEIDT---------RVAGVEMK 97
Query: 135 ---SFIHGDGLQDVVITGENGTIDGQGAIWWNMW-------------RQRTL------PF 172
+ ++ +D++I G+ G IDGQG WW ++ Q+ L
Sbjct: 98 WPAAILNVLSAKDILIEGK-GIIDGQGDHWWELYWGKDQKSGTRAEYDQKGLRWIADYAI 156
Query: 173 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDS 232
RP ++ +++ ++IFQ S FWN+ Y ++V++ V I+ D P+TDGID DS
Sbjct: 157 KRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDS 215
Query: 233 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSG 292
S+NV + + ++ GDD +A+KSG D G SS I + R S + G+ +GSE S
Sbjct: 216 STNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGY-GVTIGSEVSA 274
Query: 293 GVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
GV +V I+ + GI +K++ RGG I NI V ++ M
Sbjct: 275 GVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNM 315
>gi|295103112|emb|CBL00656.1| Endopolygalacturonase [Faecalibacterium prausnitzii SL3/3]
Length = 518
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 177/384 (46%), Gaps = 39/384 (10%)
Query: 44 FGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAV 103
+G V DG+T NT + A+ GGT+ YVP G Y T S + S+ TLYL KGAV
Sbjct: 87 YGLVADGETDNTVRLQAALSTCP----KGGTV-YVPAGRYRTASLFMKSNTTLYLEKGAV 141
Query: 104 IKATQDTWNWPLI-APLPSYGRGRE--------RPGGRYMSFIHGDGLQDVVITGENGTI 154
+ D ++P++ LPS E P + ++ + DVV+TGE GT+
Sbjct: 142 LLGDNDRTHYPILPGVLPSENEVDEYYLTGWEGNPLDSFAGLLNITQVHDVVVTGE-GTL 200
Query: 155 D--GQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIR 212
D Q WW + + + + RP + ++S ++ + + QNS W IHP++ ++ +
Sbjct: 201 DCDAQNGDWWVNPKVKRIAW-RPRAVAAVDSENVCLHGITVQNSFSWTIHPIFVKHLDLL 259
Query: 213 YVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITI 272
I P ++PNTDGIDP+S + I I GDD +A+K+ G+ I
Sbjct: 260 NFNINNPYNAPNTDGIDPESCEYIRIIGMNIHVGDDCIAMKASKVFLGMKLKRSCEHTVI 319
Query: 273 RRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG--GFIRNITVSD 330
R GI +GSE SGGV++++ + + G+ VKT GRG I + +
Sbjct: 320 RNCLLDKGHGGIVIGSEMSGGVKDMVVTQCLMDHTDRGLRVKTRRGRGNTAVIDGLVFRN 379
Query: 331 VYMENARKGIKIA----GDVGDH----------PDDKFNPNALPVVNGITIKDVWGTKVQ 376
V M + I D H P D++ P + +T++++ T Q
Sbjct: 380 VEMRGVKAPFVINMFYFCDPDGHGPYVQCREAMPVDEYTPK----LGSLTMENIVATDAQ 435
Query: 377 QSGL-IQGLKNSPFTGICLSNINL 399
+G GL P + + ++++
Sbjct: 436 FAGCYFDGLPEQPIERVTMRDVSI 459
>gi|411100599|gb|AFW03783.1| Putative polygalacturonase [Enterobacteriaceae bacterium HS]
Length = 456
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 120/237 (50%), Gaps = 12/237 (5%)
Query: 172 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 231
F RP L++F R I + ++ QNSPFW H VY ++++R V IL PAD+ NTD +D D
Sbjct: 178 FLRPPLLQFWKCRHIRLEDITLQNSPFWTCHTVYSRDIILRGVKILNPADAINTDAVDLD 237
Query: 232 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 291
SS ++ IE GDD V +KSG G+ P+ G+T+ + GIA+GSET+
Sbjct: 238 SSEDIVIEHCLFDVGDDAVTLKSGSGADGLRINLPTRGVTVSHCKILASHGGIAIGSETA 297
Query: 292 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA-----GDV 346
GG+E+V I +K+ GRGG I+NIT+S++ M I I G +
Sbjct: 298 GGIEDVTVNDCVFEGTQRAIRLKSRRGRGGTIKNITLSNLTMTGCWCPIVIGQYFAPGVL 357
Query: 347 GDHPDDKFNPNALPV------VNGITIKDVWGTKVQQ-SGLIQGLKNSPFTGICLSN 396
D + A PV + + I V T ++ + I GL +P + + N
Sbjct: 358 PAERDTTLSETAQPVTPMTPRIENVRIAHVQATDIRATAAFIVGLPEAPIQRVTIEN 414
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Query: 76 LYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMS 135
L VP GVY TG L S + L L GA+I+ D +P P+ + G E R
Sbjct: 31 LIVPAGVYETGPVTLYSDLILTLEAGAIIRFRADPHCYP---PIWTRWEGIECYAMR--P 85
Query: 136 FIHGDGLQDVVITGENGTIDGQGAIWWNMWRQ 167
++ ++ + GE G IDG G WW+ +RQ
Sbjct: 86 LMYASEASNITLRGE-GVIDGAGQWWWDTFRQ 116
>gi|307129970|ref|YP_003881986.1| Exo-poly-alpha-D-galacturonosidase [Dickeya dadantii 3937]
gi|306527499|gb|ADM97429.1| Exo-poly-alpha-D-galacturonosidase [Dickeya dadantii 3937]
Length = 467
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 173/388 (44%), Gaps = 46/388 (11%)
Query: 52 TLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTW 111
LNT++F++AI +GG + VP G YL L S++ L+L K A + A+
Sbjct: 58 ALNTESFQKAI---DECAAAGGGTVLVPAGNYLVEPLFLKSNVRLHLEKNATLVASTGEN 114
Query: 112 NWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQ---- 167
+ R E G ++ FI Q+V ITGE GTIDGQGA+WW WR
Sbjct: 115 AYRAT----DSTRYAEAENG-WLPFISIADAQNVAITGE-GTIDGQGAVWWERWRAAIRA 168
Query: 168 --RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNT 225
+ RP LI S ++I V NSP +++ Y +V + I+AP +PNT
Sbjct: 169 TGKKGGTDRPRLIYVTRSNRVLIDGVTLTNSPSFHVVMRYAHDVTVNGTHIIAPWHAPNT 228
Query: 226 DGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIA 285
D IDP S N+ I ++ I DD +A+K+ + G + V GI+
Sbjct: 229 DAIDPIDSQNIRITNNVIDCNDDHIAIKAEKPDSRFPNGVVDNIYIANNVLKQG--RGIS 286
Query: 286 VGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG- 344
+GSETSGGV NVL E+ GI +K+ G+GG ++N+T M + + +G
Sbjct: 287 IGSETSGGVNNVLVENNRFEGSMYGIRIKSLRGKGGEVKNVTYRHTRMLDVEVPLVFSGY 346
Query: 345 --------------------DVGDH-------PDDKFNPNALPVVNGITIKDVWGT-KVQ 376
+G+ P F+ P + +TI D+ T + +
Sbjct: 347 YQAAPIVQAEVDKLLQAGGFTLGEQIYPPDTEPAQPFDKVKTPHFSQVTIVDLESTGRSK 406
Query: 377 QSGLIQGLKNSPFTGICLSNINLQGVAG 404
+G I G+ +P +G + + G
Sbjct: 407 AAGYIIGVPEAPLSGFHFEQVRIDAEKG 434
>gi|431703877|ref|ZP_19525103.1| glycosyl hydrolase [Enterococcus faecium E1904]
gi|430596723|gb|ELB34539.1| glycosyl hydrolase [Enterococcus faecium E1904]
Length = 436
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 140/281 (49%), Gaps = 35/281 (12%)
Query: 76 LYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYM- 134
+++P G+YL G+ L L +GAV+K D +P I R G M
Sbjct: 40 VFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPEIDT---------RVAGVEMK 90
Query: 135 ---SFIHGDGLQDVVITGENGTIDGQGAIWWNMW-------------RQRTL------PF 172
+ ++ +D++I G+ G IDGQG WW ++ Q+ L
Sbjct: 91 WPAAILNVLSAKDILIEGK-GIIDGQGDHWWELYWGKDQKSGTRAEYDQKGLRWIADYAI 149
Query: 173 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDS 232
RP ++ +++ ++IFQ S FWN+ Y ++V++ V I+ D P+TDGID DS
Sbjct: 150 KRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDS 208
Query: 233 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSG 292
S+NV + + ++ GDD +A+KSG D G SS I + R S + G+ +GSE S
Sbjct: 209 STNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGY-GVTIGSEVSA 267
Query: 293 GVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
GV +V I+ + GI +K++ RGG I NI V ++ M
Sbjct: 268 GVSDVYIRDIDFFQSDCGIRMKSSKERGGVIENIRVENLNM 308
>gi|257886390|ref|ZP_05666043.1| glycoside hydrolase [Enterococcus faecium 1,231,501]
gi|257822246|gb|EEV49376.1| glycoside hydrolase [Enterococcus faecium 1,231,501]
Length = 436
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 140/281 (49%), Gaps = 35/281 (12%)
Query: 76 LYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYM- 134
+++P G+YL G+ L L +GAV+K D +P I R G M
Sbjct: 40 VFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPEIDT---------RVAGVEMK 90
Query: 135 ---SFIHGDGLQDVVITGENGTIDGQGAIWWNMW-------------RQRTL------PF 172
+ ++ +D++I G+ G IDGQG WW ++ Q+ L
Sbjct: 91 WPAAILNVLSAKDILIEGK-GIIDGQGDHWWELYWGKDQKSGTRAEYDQKGLRWIADYAI 149
Query: 173 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDS 232
RP ++ +++ ++IFQ S FWN+ Y ++V++ V I+ D P+TDGID DS
Sbjct: 150 KRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDS 208
Query: 233 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSG 292
S+NV + + ++ GDD +A+KSG D G SS I + R S + G+ +GSE S
Sbjct: 209 STNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGY-GVTIGSEVSA 267
Query: 293 GVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
GV +V I+ + GI +K++ RGG I NI V ++ M
Sbjct: 268 GVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNM 308
>gi|69249564|ref|ZP_00605017.1| Glycoside hydrolase, family 28 [Enterococcus faecium DO]
gi|389869657|ref|YP_006377080.1| glycosyl hydrolase [Enterococcus faecium DO]
gi|68194111|gb|EAN08650.1| Glycoside hydrolase, family 28 [Enterococcus faecium DO]
gi|388534906|gb|AFK60098.1| glycosyl hydrolase [Enterococcus faecium DO]
Length = 317
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 140/281 (49%), Gaps = 35/281 (12%)
Query: 76 LYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYM- 134
+++P G+YL G+ L L +GAV+K D +P I R G M
Sbjct: 40 VFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPEIDT---------RVAGVEMK 90
Query: 135 ---SFIHGDGLQDVVITGENGTIDGQGAIWWNMW-------------RQRTL------PF 172
+ ++ +D++I G+ G IDGQG WW ++ Q+ L
Sbjct: 91 WPAAILNVLSAKDILIEGK-GIIDGQGDHWWELYWGKDQKSGTRAEYDQKGLRWIADYAI 149
Query: 173 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDS 232
RP ++ +++ ++IFQ S FWN+ Y ++V++ V I+ D P+TDGID DS
Sbjct: 150 KRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDS 208
Query: 233 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSG 292
S+NV + + ++ GDD +A+KSG D G SS I + R S + G+ +GSE S
Sbjct: 209 STNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGY-GVTIGSEVSA 267
Query: 293 GVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
GV +V I+ + GI +K++ RGG I NI V ++ M
Sbjct: 268 GVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNM 308
>gi|20451636|emb|CAC83614.1| putative polygalacturonase [Erwinia chrysanthemi]
Length = 457
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 173/388 (44%), Gaps = 46/388 (11%)
Query: 52 TLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTW 111
LNT++F++AI +GG + VP G YL L S++ L+L K A + A+
Sbjct: 48 ALNTESFQKAI---DECAAAGGGTVLVPAGNYLVEPLFLKSNVRLHLEKNATLVASTGEN 104
Query: 112 NWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQ---- 167
+ R E G ++ FI Q+V ITGE GTIDGQGA+WW WR
Sbjct: 105 AYRAT----DSTRYAEAENG-WLPFISIADAQNVAITGE-GTIDGQGAVWWERWRAAIRA 158
Query: 168 --RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNT 225
+ RP LI S ++I V NSP +++ Y +V + I+AP +PNT
Sbjct: 159 TGKKGGTDRPRLIYVTRSNRVLIDGVTLTNSPSFHVVMRYAHDVTVNGTHIIAPWHAPNT 218
Query: 226 DGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIA 285
D IDP S N+ I ++ I DD +A+K+ + G + V GI+
Sbjct: 219 DAIDPIDSQNIRITNNVIDCNDDHIAIKAEKPDSRFPNGVVDNIYIANNVLKQG--RGIS 276
Query: 286 VGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG- 344
+GSETSGGV NVL E+ GI +K+ G+GG ++N+T M + + +G
Sbjct: 277 IGSETSGGVNNVLVENNRFEGSMYGIRIKSLRGKGGEVKNVTYRHTRMLDVEVPLVFSGY 336
Query: 345 --------------------DVGDH-------PDDKFNPNALPVVNGITIKDVWGT-KVQ 376
+G+ P F+ P + +TI D+ T + +
Sbjct: 337 YQAAPIVQAEVDKLLQAGGFTLGEQIYPPDTEPAQPFDKVKTPHFSQVTIVDLESTGRSK 396
Query: 377 QSGLIQGLKNSPFTGICLSNINLQGVAG 404
+G I G+ +P +G + + G
Sbjct: 397 AAGYIIGVPEAPLSGFHFEQVRIDAEKG 424
>gi|282601137|ref|ZP_05980861.2| glycoside hydrolase, family 77 [Subdoligranulum variabile DSM
15176]
gi|282569962|gb|EFB75497.1| polygalacturonase (pectinase) [Subdoligranulum variabile DSM 15176]
Length = 531
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 129/424 (30%), Positives = 194/424 (45%), Gaps = 63/424 (14%)
Query: 38 KISITD--FGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMT 95
+I++T+ + GDG T NT A + AI G +Y+P G YLTG+ L S M
Sbjct: 114 RINVTEAPYWAKGDGITKNTAALQRAIDAC-----GPGDAVYLPAGTYLTGALQLHSDME 168
Query: 96 LYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFI------HGDGLQ--DVVI 147
LYL +GAV++ T ++ +PS G ER Y S + H DG +VVI
Sbjct: 169 LYLEEGAVLQGTAQLVDYQ--PRIPSRFEGIERRC--YSSLLNLGKMDHDDGYNCVNVVI 224
Query: 148 TGENGTIDGQGAIWWNMW-----------------------RQRTLP-FTRPNLIEFMNS 183
G+ GTI G G + + T+P RP L+ N
Sbjct: 225 RGK-GTIAGGGKALADAIIADEREHLKDYLAEHLDLVESCDEEDTIPGRVRPRLVNLSNC 283
Query: 184 RSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYI 243
+++ IS + ++SP W + +Y N+V + + N DG DPDSS+N + S +
Sbjct: 284 QNVWISGLTLKDSPSWILQMIYSDNIVTDHCAFHSEG-IWNGDGWDPDSSTNCTLFASEL 342
Query: 244 STGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHIN 303
TGDD VA+KSG + G A G PS+ I I S G+ +GSE SGGVE+V +
Sbjct: 343 YTGDDSVAIKSGKNPEGNAIGRPSAHIYIFDCRVGSG-QGLCIGSEMSGGVEDVQIWDCD 401
Query: 304 LYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVN 363
L N G+ +K RGG++R +TV D K ++ + DD + +PV+
Sbjct: 402 LENSFSGLEIKATAKRGGYVRGVTVRDC------KAPRVMIHAVPYNDDGEAADTVPVLE 455
Query: 364 -----GITIKDVWGTKVQQSGLIQGLKNSPFTGI--CLSNINLQGVA----GPTSPPLKC 412
G+T+ Q+ + ++ + F G L ++N G+ P P C
Sbjct: 456 HFTFAGLTLTGRALNSKQEWKDVSPVELAGFEGPNGTLRDVNFDGLTITAKAPRLPLQYC 515
Query: 413 SDVS 416
SDV+
Sbjct: 516 SDVT 519
>gi|257880502|ref|ZP_05660155.1| glycoside hydrolase [Enterococcus faecium 1,230,933]
gi|257891467|ref|ZP_05671120.1| glycoside hydrolase [Enterococcus faecium 1,231,410]
gi|257894590|ref|ZP_05674243.1| glycoside hydrolase [Enterococcus faecium 1,231,408]
gi|260562501|ref|ZP_05833011.1| glycoside hydrolase, family 28 [Enterococcus faecium C68]
gi|293559900|ref|ZP_06676412.1| glycoside hydrolase, family 28 [Enterococcus faecium E1162]
gi|293568218|ref|ZP_06679552.1| glycoside hydrolase, family 28 [Enterococcus faecium E1071]
gi|314938533|ref|ZP_07845818.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|314942449|ref|ZP_07849289.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|314952938|ref|ZP_07855905.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|314992207|ref|ZP_07857650.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|314995236|ref|ZP_07860348.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|383329848|ref|YP_005355732.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|406581503|ref|ZP_11056645.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|406583794|ref|ZP_11058839.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|406586138|ref|ZP_11061075.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|406591702|ref|ZP_11065948.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410936303|ref|ZP_11368170.1| polygalacturonase [Enterococcus sp. GMD5E]
gi|415891700|ref|ZP_11549789.1| glycoside hydrolase, family 28 [Enterococcus faecium E4453]
gi|416141648|ref|ZP_11599441.1| glycoside hydrolase, family 28 [Enterococcus faecium E4452]
gi|424845982|ref|ZP_18270582.1| polygalacturonase [Enterococcus faecium R501]
gi|424854970|ref|ZP_18279301.1| polygalacturonase [Enterococcus faecium R499]
gi|424907683|ref|ZP_18331153.1| polygalacturonase [Enterococcus faecium R497]
gi|424960554|ref|ZP_18375059.1| polygalacturonase [Enterococcus faecium P1986]
gi|424964733|ref|ZP_18378800.1| polygalacturonase [Enterococcus faecium P1190]
gi|424971125|ref|ZP_18384586.1| polygalacturonase [Enterococcus faecium P1139]
gi|424974628|ref|ZP_18387853.1| polygalacturonase [Enterococcus faecium P1137]
gi|424981126|ref|ZP_18393878.1| polygalacturonase [Enterococcus faecium ERV99]
gi|424983701|ref|ZP_18396276.1| polygalacturonase [Enterococcus faecium ERV69]
gi|424987499|ref|ZP_18399873.1| polygalacturonase [Enterococcus faecium ERV38]
gi|424992279|ref|ZP_18404358.1| polygalacturonase [Enterococcus faecium ERV26]
gi|425007167|ref|ZP_18418312.1| polygalacturonase [Enterococcus faecium ERV1]
gi|425014690|ref|ZP_18425355.1| polygalacturonase [Enterococcus faecium E417]
gi|425021599|ref|ZP_18431838.1| polygalacturonase [Enterococcus faecium C497]
gi|425023083|ref|ZP_18433222.1| polygalacturonase [Enterococcus faecium C1904]
gi|425034686|ref|ZP_18439563.1| polygalacturonase [Enterococcus faecium 514]
gi|425042059|ref|ZP_18446425.1| polygalacturonase [Enterococcus faecium 511]
gi|425046653|ref|ZP_18450650.1| polygalacturonase [Enterococcus faecium 510]
gi|425047905|ref|ZP_18451836.1| polygalacturonase [Enterococcus faecium 509]
gi|425051840|ref|ZP_18455481.1| polygalacturonase [Enterococcus faecium 506]
gi|425060678|ref|ZP_18463962.1| polygalacturonase [Enterococcus faecium 503]
gi|430821821|ref|ZP_19440408.1| glycosyl hydrolase [Enterococcus faecium E0045]
gi|430827440|ref|ZP_19445583.1| glycosyl hydrolase [Enterococcus faecium E0164]
gi|430830082|ref|ZP_19448148.1| glycosyl hydrolase [Enterococcus faecium E0269]
gi|430832646|ref|ZP_19450686.1| glycosyl hydrolase [Enterococcus faecium E0333]
gi|430845573|ref|ZP_19463457.1| glycosyl hydrolase [Enterococcus faecium E1050]
gi|430848406|ref|ZP_19466225.1| glycosyl hydrolase [Enterococcus faecium E1133]
gi|430856188|ref|ZP_19473891.1| glycosyl hydrolase [Enterococcus faecium E1392]
gi|430921156|ref|ZP_19485323.1| glycosyl hydrolase [Enterococcus faecium E1575]
gi|431220446|ref|ZP_19501380.1| glycosyl hydrolase [Enterococcus faecium E1620]
gi|431243678|ref|ZP_19503851.1| glycosyl hydrolase [Enterococcus faecium E1622]
gi|431323331|ref|ZP_19509135.1| glycosyl hydrolase [Enterococcus faecium E1626]
gi|431388094|ref|ZP_19511700.1| glycosyl hydrolase [Enterococcus faecium E1627]
gi|431472779|ref|ZP_19514507.1| glycosyl hydrolase [Enterococcus faecium E1630]
gi|431520920|ref|ZP_19516634.1| glycosyl hydrolase [Enterococcus faecium E1634]
gi|431565479|ref|ZP_19519841.1| glycosyl hydrolase [Enterococcus faecium E1731]
gi|431747812|ref|ZP_19536581.1| glycosyl hydrolase [Enterococcus faecium E2134]
gi|431750357|ref|ZP_19539076.1| glycosyl hydrolase [Enterococcus faecium E2297]
gi|431755435|ref|ZP_19544084.1| glycosyl hydrolase [Enterococcus faecium E2883]
gi|431761409|ref|ZP_19549983.1| glycosyl hydrolase [Enterococcus faecium E3346]
gi|431766527|ref|ZP_19555004.1| glycosyl hydrolase [Enterococcus faecium E4215]
gi|431769102|ref|ZP_19557530.1| glycosyl hydrolase [Enterococcus faecium E1321]
gi|431771653|ref|ZP_19560033.1| glycosyl hydrolase [Enterococcus faecium E1644]
gi|431774523|ref|ZP_19562830.1| glycosyl hydrolase [Enterococcus faecium E2369]
gi|431780630|ref|ZP_19568803.1| glycosyl hydrolase [Enterococcus faecium E4389]
gi|257814730|gb|EEV43488.1| glycoside hydrolase [Enterococcus faecium 1,230,933]
gi|257827827|gb|EEV54453.1| glycoside hydrolase [Enterococcus faecium 1,231,410]
gi|257830969|gb|EEV57576.1| glycoside hydrolase [Enterococcus faecium 1,231,408]
gi|260073186|gb|EEW61531.1| glycoside hydrolase, family 28 [Enterococcus faecium C68]
gi|291589118|gb|EFF20932.1| glycoside hydrolase, family 28 [Enterococcus faecium E1071]
gi|291606172|gb|EFF35594.1| glycoside hydrolase, family 28 [Enterococcus faecium E1162]
gi|313590492|gb|EFR69337.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|313593265|gb|EFR72110.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|313595010|gb|EFR73855.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|313598757|gb|EFR77602.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|313642161|gb|EFS06741.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|364090042|gb|EHM32674.1| glycoside hydrolase, family 28 [Enterococcus faecium E4452]
gi|364093760|gb|EHM35997.1| glycoside hydrolase, family 28 [Enterococcus faecium E4453]
gi|378939542|gb|AFC64614.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|402919810|gb|EJX40376.1| polygalacturonase [Enterococcus faecium R501]
gi|402930037|gb|EJX49740.1| polygalacturonase [Enterococcus faecium R497]
gi|402931903|gb|EJX51454.1| polygalacturonase [Enterococcus faecium R499]
gi|402945951|gb|EJX64271.1| polygalacturonase [Enterococcus faecium P1190]
gi|402947336|gb|EJX65555.1| polygalacturonase [Enterococcus faecium P1986]
gi|402955971|gb|EJX73460.1| polygalacturonase [Enterococcus faecium P1137]
gi|402959993|gb|EJX77186.1| polygalacturonase [Enterococcus faecium P1139]
gi|402964601|gb|EJX81373.1| polygalacturonase [Enterococcus faecium ERV99]
gi|402970834|gb|EJX87147.1| polygalacturonase [Enterococcus faecium ERV69]
gi|402973957|gb|EJX90038.1| polygalacturonase [Enterococcus faecium ERV26]
gi|402974321|gb|EJX90380.1| polygalacturonase [Enterococcus faecium ERV38]
gi|402995601|gb|EJY10044.1| polygalacturonase [Enterococcus faecium ERV1]
gi|402998000|gb|EJY12285.1| polygalacturonase [Enterococcus faecium E417]
gi|403006140|gb|EJY19807.1| polygalacturonase [Enterococcus faecium C497]
gi|403010837|gb|EJY24182.1| polygalacturonase [Enterococcus faecium C1904]
gi|403019832|gb|EJY32411.1| polygalacturonase [Enterococcus faecium 514]
gi|403023546|gb|EJY35791.1| polygalacturonase [Enterococcus faecium 510]
gi|403024469|gb|EJY36625.1| polygalacturonase [Enterococcus faecium 511]
gi|403032233|gb|EJY43801.1| polygalacturonase [Enterococcus faecium 509]
gi|403036566|gb|EJY47912.1| polygalacturonase [Enterococcus faecium 506]
gi|403042389|gb|EJY53347.1| polygalacturonase [Enterococcus faecium 503]
gi|404452562|gb|EJZ99746.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|404456117|gb|EKA02874.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|404461646|gb|EKA07540.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|404467225|gb|EKA12407.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410735249|gb|EKQ77163.1| polygalacturonase [Enterococcus sp. GMD5E]
gi|430438093|gb|ELA48581.1| glycosyl hydrolase [Enterococcus faecium E0045]
gi|430444048|gb|ELA53960.1| glycosyl hydrolase [Enterococcus faecium E0164]
gi|430479137|gb|ELA56411.1| glycosyl hydrolase [Enterococcus faecium E0269]
gi|430479701|gb|ELA56917.1| glycosyl hydrolase [Enterococcus faecium E0333]
gi|430495380|gb|ELA71555.1| glycosyl hydrolase [Enterococcus faecium E1050]
gi|430534977|gb|ELA75402.1| glycosyl hydrolase [Enterococcus faecium E1133]
gi|430545274|gb|ELA85257.1| glycosyl hydrolase [Enterococcus faecium E1392]
gi|430554049|gb|ELA93721.1| glycosyl hydrolase [Enterococcus faecium E1575]
gi|430569541|gb|ELB08542.1| glycosyl hydrolase [Enterococcus faecium E1620]
gi|430571647|gb|ELB10533.1| glycosyl hydrolase [Enterococcus faecium E1622]
gi|430577979|gb|ELB16555.1| glycosyl hydrolase [Enterococcus faecium E1626]
gi|430580359|gb|ELB18832.1| glycosyl hydrolase [Enterococcus faecium E1627]
gi|430583564|gb|ELB21926.1| glycosyl hydrolase [Enterococcus faecium E1630]
gi|430585063|gb|ELB23364.1| glycosyl hydrolase [Enterococcus faecium E1634]
gi|430589388|gb|ELB27517.1| glycosyl hydrolase [Enterococcus faecium E1731]
gi|430604699|gb|ELB42134.1| glycosyl hydrolase [Enterococcus faecium E2134]
gi|430609784|gb|ELB46961.1| glycosyl hydrolase [Enterococcus faecium E2297]
gi|430616657|gb|ELB53552.1| glycosyl hydrolase [Enterococcus faecium E2883]
gi|430621550|gb|ELB58311.1| glycosyl hydrolase [Enterococcus faecium E3346]
gi|430626087|gb|ELB62675.1| glycosyl hydrolase [Enterococcus faecium E4215]
gi|430628018|gb|ELB64476.1| glycosyl hydrolase [Enterococcus faecium E1321]
gi|430632927|gb|ELB69117.1| glycosyl hydrolase [Enterococcus faecium E1644]
gi|430633928|gb|ELB70073.1| glycosyl hydrolase [Enterococcus faecium E2369]
gi|430639085|gb|ELB74967.1| glycosyl hydrolase [Enterococcus faecium E4389]
Length = 436
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 140/281 (49%), Gaps = 35/281 (12%)
Query: 76 LYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYM- 134
+++P G+YL G+ L L +GAV+K D +P I R G M
Sbjct: 40 VFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPEIDT---------RVAGVEMK 90
Query: 135 ---SFIHGDGLQDVVITGENGTIDGQGAIWWNMW-------------RQRTL------PF 172
+ ++ +D++I G+ G IDGQG WW ++ Q+ L
Sbjct: 91 WPAAILNVLSAKDILIEGK-GIIDGQGDHWWELYWGKDQKSGTRAEYDQKGLRWIADYAI 149
Query: 173 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDS 232
RP ++ +++ ++IFQ S FWN+ Y ++V++ V I+ D P+TDGID DS
Sbjct: 150 KRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDS 208
Query: 233 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSG 292
S+NV + + ++ GDD +A+KSG D G SS I + R S + G+ +GSE S
Sbjct: 209 STNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGY-GVTIGSEVSA 267
Query: 293 GVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
GV +V I+ + GI +K++ RGG I NI V ++ M
Sbjct: 268 GVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNM 308
>gi|375100883|ref|ZP_09747146.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661615|gb|EHR61493.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 460
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 116/395 (29%), Positives = 178/395 (45%), Gaps = 50/395 (12%)
Query: 41 ITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLT-GSFNLTSHMTLYLA 99
+TDFG VGDG+T + I GG + +P G + + G +L SH+ L+++
Sbjct: 58 VTDFGAVGDGRT---DSHDAITAAIAAAHTDGGGRVVLPEGTWRSDGPLHLESHIELHVS 114
Query: 100 KGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGA 159
GA + D ++ + + + G E G Y I+ + DV ITG NG IDG
Sbjct: 115 DGAHLIFGPDPADY--LPAVHTRWEGTEMYG--YSPLIYAHDVHDVAITG-NGVIDGNPD 169
Query: 160 IWWNMWRQ---------RTLPFT---------------RPNLIEFMNSRSIIISNVIFQN 195
++ W R + F RP++I+ ++ +++++ +N
Sbjct: 170 SEFHTWTDKQDADVQALRRMGFDGVPLEQRQFGEGHHLRPSMIQIFDAERVLLADYTVRN 229
Query: 196 SPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSG 255
SPFW H VY + V+R +T+ + +PN DG+D DSS++V IE + TGDD V VKSG
Sbjct: 230 SPFWINHLVYTDDAVVRGLTV--DSHNPNNDGVDVDSSTDVLIEHNTFRTGDDSVVVKSG 287
Query: 256 WDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKT 315
D+ G G PS + +R GIA+GSE SGG+ +V L + I K
Sbjct: 288 RDKDGRDIGRPSRNVVVRH-NDMGGEDGIALGSEMSGGISHVYFTDNTLRSGAAAIRFKG 346
Query: 316 NIGRGGFIRNITVSDVYMENARKGIKIAGDV-----GDHPDDKFNPNALPVVNGITIKDV 370
N+ RGG + +I V + +++ + I D GD P PV I D
Sbjct: 347 NLDRGGTVEHIRVRNFDIDSFERLIWFQLDYPGELGGDFP---------PVYRDIVFSDF 397
Query: 371 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGP 405
T I G +P + L NI + P
Sbjct: 398 TVTSADTLLEIHGPDAAPLRDVTLRNITVAHTDTP 432
>gi|397656221|ref|YP_006496923.1| Polygalacturonase [Klebsiella oxytoca E718]
gi|394344836|gb|AFN30957.1| Polygalacturonase [Klebsiella oxytoca E718]
Length = 460
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 122/413 (29%), Positives = 187/413 (45%), Gaps = 63/413 (15%)
Query: 37 DKI-SITDFGGVGDGK--TLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSH 93
DKI IT +G G LNT A ++AI +GG + VP G +LT L ++
Sbjct: 33 DKICDITHYGAEGHRLQIALNTDAIQKAI---DDCAAAGGGTVLVPKGNFLTNPLFLKNN 89
Query: 94 MTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRY-------MSFIHGDGLQDVV 146
+ L L K A + A+ + + RG ++ RY + FI Q+V
Sbjct: 90 IQLKLEKDATLVASTEVAAY----------RGDDKT--RYAEAENGWLPFISIADAQNVA 137
Query: 147 ITGENGTIDGQGAIWWNMWRQRTLPF------TRPNLIEFMNSRSIIISNVIFQNSPFWN 200
I GE GTIDGQGA+WW WR+ RP LI + +++I V +SP ++
Sbjct: 138 IVGE-GTIDGQGAVWWERWRENIRATGKKGGTDRPRLIYITRASNVLIDGVTLTHSPSFH 196
Query: 201 IHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 260
+ Y +V I IL+P +PNTD IDP S N+ I ++YI DD +A+K+ +
Sbjct: 197 VVTRYAHDVDINGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAIKAEKADPR 256
Query: 261 IAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 320
G I I T GI++GSE++GGV NVL E+ GI +K+ G+G
Sbjct: 257 FPEG-VVDNIYIANNTLKQG-RGISIGSESAGGVNNVLVENNTFEGSMYGIRIKSPRGKG 314
Query: 321 GFIRNITVSDVYMENAR--------------------KGIKIAG-DVGDH-------PDD 352
G ++NI + M N K ++ G +G+ P
Sbjct: 315 GEVKNIVYRNTRMHNVEVPLVFSAYYKAAPIVQAEVDKLLQAGGFTLGEQIYPPDSDPKQ 374
Query: 353 KFNPNALPVVNGITIKDVWGT-KVQQSGLIQGLKNSPFTGICLSNINLQGVAG 404
F+ P + IT++++ T + + I G +P +G SN+N++ G
Sbjct: 375 PFDKYKTPHFSNITVENLTSTGDSKAAAYIIGTPEAPLSGFHFSNVNIEADRG 427
>gi|408369670|ref|ZP_11167450.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
gi|407744724|gb|EKF56291.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
Length = 454
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 183/406 (45%), Gaps = 53/406 (13%)
Query: 30 VPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFN 89
VP ++++ ITD+G + + + ++A +AI + GG + +P G +LTG +
Sbjct: 43 VPDFSQSNRYYITDYGALPNDQKATSRAIMDAI---KEAHAQGGGRVVIPKGEWLTGKIH 99
Query: 90 LTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITG 149
L S++ L+L +GAV+ + + ++ + + S G E Y I+ +++ ITG
Sbjct: 100 LKSNINLHLEQGAVLLFSDNPQDY--LPAVHSSWEGLE--CFNYSPLIYAYKCKNIAITG 155
Query: 150 ENGTIDGQGAIWWNMW-----------------------RQRTL----PFTRPNLIEFMN 182
+ G + + W + + QR + RP I+F
Sbjct: 156 Q-GELKAKMDTWRSWFDRPPGHMNSLKELYHMAANNVPVEQRQMVNDSANLRPQFIQFNR 214
Query: 183 SRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSY 242
S +I++ V NSPFW IHP NV I+ VT+ A N DG+DP+ S N+ IE+
Sbjct: 215 SENILLQGVTITNSPFWVIHPYLSKNVSIKEVTVFAHGH--NNDGVDPEMSQNIIIENCT 272
Query: 243 ISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHI 302
GDD +AVKSG ++ P+ I I+ + +A+GSE SGG+EN+ +
Sbjct: 273 FDQGDDAIAVKSGRNQDAWRLATPAKNIVIKNCKIINGHQLMAIGSELSGGIENIYMSNC 332
Query: 303 NLYNVGVGIH---VKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFN---- 355
+ H +KTN RGG VS++YM++ + G G +G D +
Sbjct: 333 QVEQGAKLNHLLFIKTNERRGGI-----VSNIYMDSIQAGEIAEGILGIDTDVLYQWRNL 387
Query: 356 ----PNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNI 397
L V+ + + D+ V I G + P + L+ +
Sbjct: 388 VPTYQRELTVIKDVYLSDIHAENVAFISKISGQEQVPVKNVVLNRV 433
>gi|424978123|ref|ZP_18391071.1| polygalacturonase [Enterococcus faecium P1123]
gi|402963044|gb|EJX79942.1| polygalacturonase [Enterococcus faecium P1123]
Length = 426
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 140/281 (49%), Gaps = 35/281 (12%)
Query: 76 LYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYM- 134
+++P G+YL G+ L L +GAV+K D +P I R G M
Sbjct: 30 VFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPEIDT---------RVAGVEMK 80
Query: 135 ---SFIHGDGLQDVVITGENGTIDGQGAIWWNMW-------------RQRTL------PF 172
+ ++ +D++I G+ G IDGQG WW ++ Q+ L
Sbjct: 81 WPAAILNVLSAKDILIEGK-GIIDGQGDHWWELYWGKDQKSGTRAEYDQKGLRWIADYAI 139
Query: 173 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDS 232
RP ++ +++ ++IFQ S FWN+ Y ++V++ V I+ D P+TDGID DS
Sbjct: 140 KRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDS 198
Query: 233 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSG 292
S+NV + + ++ GDD +A+KSG D G SS I + R S + G+ +GSE S
Sbjct: 199 STNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGY-GVTIGSEVSA 257
Query: 293 GVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
GV +V I+ + GI +K++ RGG I NI V ++ M
Sbjct: 258 GVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNM 298
>gi|315570522|gb|ADU33265.1| glycoside hydrolase family protein 28 [Callosobruchus maculatus]
Length = 409
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 189/412 (45%), Gaps = 46/412 (11%)
Query: 5 LVTLSILLSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYR 64
++ LS LSY C S + ++ +F G ++TK AI
Sbjct: 8 IICLSFSLSYIQCNS-----------------EIYNVIEFRVDPTGHIVSTKGITAAI-- 48
Query: 65 IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNW--PLIAPLPSY 122
+ ++ G +++ P G+Y TG L SH+TL + GA++ +D N P+ LPS
Sbjct: 49 -REASKNNGGVVHFPKGIYRTGPIQLRSHVTLQIDNGALL-LFEDNQNLYPPVNVTLPS- 105
Query: 123 GRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMN 182
E Y I G +++ ITG G +DG GA W + P TRP + F+
Sbjct: 106 ---GEVIALSYTPLISAFGQRNISITGR-GMLDGSGAFWIKLLPP---PSTRPFFLYFVE 158
Query: 183 SRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS----PNTDGIDPDSSSNVCI 238
S+ +++ V +NSP +N+H S++ I+ +TI P ++ PNTDGI+ D + +
Sbjct: 159 SQEVLLEGVHIKNSPMYNVHFKDTSHITIKGITITNPENTVDPGPNTDGINCDPCRYLHV 218
Query: 239 EDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVL 298
+ ISTGDD + +K+ P+ + I +GI++GS T+GG+ N+
Sbjct: 219 SNVTISTGDDAIVMKADMRGRTSKQLKPTEHVLIENSFIFVGHAGISMGSATAGGLRNIT 278
Query: 299 AEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK-GIKIAGDVGDHPDDKFNPN 357
+ GI++KT RGG + +I ++ M N RK G+ IA DV + D+ +
Sbjct: 279 VRNCLFNGTNRGIYIKTARDRGGKVEDIHYHNITMLNIRKEGVAIA-DVYNGTDEGLHER 337
Query: 358 AL---------PVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 400
+ P + I + + G +S I GL SP I + + +
Sbjct: 338 NVYPQPVTENTPFIGNIEFQGIRGNSKLESIFIVGLPESPVVNITFKDFSAK 389
>gi|425055006|ref|ZP_18458501.1| polygalacturonase [Enterococcus faecium 505]
gi|403034856|gb|EJY46278.1| polygalacturonase [Enterococcus faecium 505]
Length = 436
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 140/281 (49%), Gaps = 35/281 (12%)
Query: 76 LYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMS 135
+++P G+YL G+ L L +GAV+K + +P I R G M
Sbjct: 40 VFIPKGIYLVGALFLKDKSHLIFEEGAVLKGKTEIEAFPEIDT---------RVAGIEMK 90
Query: 136 F----IHGDGLQDVVITGENGTIDGQGAIWWNMW---RQRT----------------LPF 172
+ ++ +D++I G+ G IDGQG WW ++ Q++
Sbjct: 91 WPAAVLNVLSAKDILIEGK-GIIDGQGEHWWELYWGKDQKSGTRAEYDRKGLRWIADYAI 149
Query: 173 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDS 232
RP ++ ++I ++IFQ S FWN+ Y ++V++ V I+ D P+TDGID DS
Sbjct: 150 KRPRACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKV-IIRHNDGPSTDGIDIDS 208
Query: 233 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSG 292
S++V I + ++ GDD +A+KSG D G SS I I R S + G+ +GSE S
Sbjct: 209 STDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGY-GVTIGSEVSA 267
Query: 293 GVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
GV +V IN + GI +K++ RGG I NI V ++ M
Sbjct: 268 GVSDVYIHDINFFQSDCGIRMKSSRERGGVIENIRVENLNM 308
>gi|160945608|ref|ZP_02092834.1| hypothetical protein FAEPRAM212_03137 [Faecalibacterium prausnitzii
M21/2]
gi|158443339|gb|EDP20344.1| polygalacturonase (pectinase) [Faecalibacterium prausnitzii M21/2]
Length = 518
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 177/384 (46%), Gaps = 39/384 (10%)
Query: 44 FGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAV 103
+G V DG+T NT + A+ GGT+ YVP G Y T S + S+ TLYL KGAV
Sbjct: 87 YGLVADGETDNTVRLQAALSTCP----KGGTV-YVPAGRYRTASLFMKSNTTLYLEKGAV 141
Query: 104 IKATQDTWNWPLI-APLPSYGRGRE--------RPGGRYMSFIHGDGLQDVVITGENGTI 154
+ D ++P++ LPS E P + ++ + DVV+TGE GT+
Sbjct: 142 LLGDNDRTHYPILPGVLPSENEVDEYYLTGWEGNPLDSFAGLLNITQVHDVVVTGE-GTL 200
Query: 155 D--GQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIR 212
D + WW + + + + RP + ++S ++ + + QNS W IHP++ ++ +
Sbjct: 201 DCDAENGDWWVNPKVKRIAW-RPRAVAAVDSENVCLHGITVQNSYSWTIHPIFVKHLDLL 259
Query: 213 YVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITI 272
I P ++PNTDGIDP+S + I I GDD +A+K+ G+ I
Sbjct: 260 NFNINNPYNAPNTDGIDPESCEYIRIIGMNIHVGDDCIAMKASKVFLGMKLKRSCEHTVI 319
Query: 273 RRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG--GFIRNITVSD 330
R GI +GSE SGGV++++ + + G+ VKT GRG I + +
Sbjct: 320 RNCLLDKGHGGIVIGSEMSGGVKDMVVTQCLMDHTDRGLRVKTRRGRGNTAVIDGLVFRN 379
Query: 331 VYMENARKGIKIA----GDVGDH----------PDDKFNPNALPVVNGITIKDVWGTKVQ 376
V M + I D H P D++ P + +T++++ T Q
Sbjct: 380 VEMRGVKAPFVINMFYFCDPDGHGPYVQCREPLPVDEYTPK----LGSLTMENIVATDAQ 435
Query: 377 QSGL-IQGLKNSPFTGICLSNINL 399
+G GL P + + ++++
Sbjct: 436 FAGCYFDGLPEQPIERVTMRDVSI 459
>gi|375259243|ref|YP_005018413.1| glycoside hydrolase [Klebsiella oxytoca KCTC 1686]
gi|365908721|gb|AEX04174.1| glycoside hydrolase family protein [Klebsiella oxytoca KCTC 1686]
Length = 460
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 122/413 (29%), Positives = 187/413 (45%), Gaps = 63/413 (15%)
Query: 37 DKI-SITDFGGVGDGK--TLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSH 93
DKI IT +G G LNT A ++AI +GG + VP G +LT L ++
Sbjct: 33 DKICDITHYGAEGHRLQIALNTDAIQKAI---DDCAAAGGGTVLVPKGNFLTNPLFLKNN 89
Query: 94 MTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRY-------MSFIHGDGLQDVV 146
+ L L K A + A+ + + RG ++ RY + FI Q+V
Sbjct: 90 IQLKLEKDATLVASTEVAAY----------RGDDKT--RYAEAENGWLPFISIADAQNVA 137
Query: 147 ITGENGTIDGQGAIWWNMWRQRTLPF------TRPNLIEFMNSRSIIISNVIFQNSPFWN 200
I GE GTIDGQGA+WW WR+ RP LI + +++I V +SP ++
Sbjct: 138 IVGE-GTIDGQGAVWWERWRENIRATGKKGGTDRPRLIYITRASNVLIYGVTLTHSPSFH 196
Query: 201 IHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 260
+ Y +V I IL+P +PNTD IDP S N+ I ++YI DD +A+K+ +
Sbjct: 197 VVTRYAHDVDINGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAIKAEKADPR 256
Query: 261 IAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 320
G I I T GI++GSE++GGV NVL E+ GI +K+ G+G
Sbjct: 257 FPEG-VVDNIYIANNTLKQG-RGISIGSESAGGVNNVLVENNTFEGSMYGIRIKSPRGKG 314
Query: 321 GFIRNITVSDVYMENAR--------------------KGIKIAG-DVGDH-------PDD 352
G ++NI + M N K ++ G +G+ P
Sbjct: 315 GEVKNIVYRNTRMHNVEVPLVFSAYYKAAPIVQAEVDKLLQAGGFTLGEQIYPPDSDPKQ 374
Query: 353 KFNPNALPVVNGITIKDVWGT-KVQQSGLIQGLKNSPFTGICLSNINLQGVAG 404
F+ P + IT++++ T + + I G +P +G SN+N++ G
Sbjct: 375 PFDKYKTPHFSNITVENLTSTGDSKAAAYIIGTPEAPLSGFHFSNVNIEADRG 427
>gi|86141279|ref|ZP_01059825.1| hypothetical protein MED217_04657 [Leeuwenhoekiella blandensis
MED217]
gi|85831838|gb|EAQ50293.1| hypothetical protein MED217_04657 [Leeuwenhoekiella blandensis
MED217]
Length = 483
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 119/415 (28%), Positives = 186/415 (44%), Gaps = 56/415 (13%)
Query: 34 YRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSH 93
+ + +I D+G G LN A I+ +GG + +P G +LTG +L S+
Sbjct: 61 FADTTFNILDYGAQEGGTVLNADA---IADAIEACNAAGGGRVLIPAGRFLTGPIHLKSN 117
Query: 94 MTLYLAKGAVIKATQDTWNW-PLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENG 152
+ L+L +GA + T D + P++ SY G E Y I+ G +++ +TG+ G
Sbjct: 118 VNLHLEEGAEVLFTTDKSAYLPVVHT--SY-EGMEIM--NYSPLIYAKGQKNIAVTGK-G 171
Query: 153 TIDGQG--AIWW---------------NMWRQRTLP--FT-------------------R 174
T +GQ WW +P FT R
Sbjct: 172 TFNGQADKENWWPWCGAERYGHKEGAPKQKDDHNIPALFTMIEDGTPVEERIFGEGHQLR 231
Query: 175 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 234
P +E + +++I V F N+PFW IHP+ V + VT+ + PN DG DP+ S
Sbjct: 232 PLFLETLECENVLIQGVTFTNAPFWVIHPLKSKYVTVDGVTV--NSHGPNNDGCDPEYSK 289
Query: 235 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 294
V I + +TGDD +A+KSG + G PS I + G+ +GSE S GV
Sbjct: 290 YVHITNCKFNTGDDCIAIKSGRNGDGRRVNIPSENIVVENCDMKDGHGGVVMGSEISAGV 349
Query: 295 ENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI-KIAGDVGDHPD 351
NV + +N N+ I +KTN RGGF+ N+ V D+ + ++ + KI G +
Sbjct: 350 RNVFVRNCTMNSPNLDRAIRIKTNTLRGGFVENVYVKDIEVGQVKEAVLKINTYYGIY-- 407
Query: 352 DKFNPNALPVVNGITIKDVWGTKVQQSG-LIQGLKNSPFTGICLSNINLQGVAGP 405
K +P + I +++V + G LIQG + P TGI N+ ++ P
Sbjct: 408 GKQEGEFIPTIQNINLENVTVENGGKYGLLIQGREEKPVTGISFKNVTIKNADTP 462
>gi|345301605|ref|YP_004821553.1| glycoside hydrolase family 28 [Enterobacter asburiae LF7a]
gi|345095542|gb|AEN67177.1| glycoside hydrolase family 28 [Enterobacter asburiae LF7a]
Length = 447
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 177/374 (47%), Gaps = 48/374 (12%)
Query: 65 IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNW-PLIAPLPSYG 123
I +GG ++ +P G +++G L SH+TL+LA G+ +K+T + ++ P P++
Sbjct: 53 IDQCSSNGGGIVTLPAGTWVSGPLTLKSHVTLHLAAGSTLKSTGNPDDFVPAFISQPTHP 112
Query: 124 RGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAI-WWNM--------------WRQR 168
R + I +QD+ ITG GTIDGQG WW+ W ++
Sbjct: 113 R---------EALIIASHVQDIAITGP-GTIDGQGQKSWWSKASDAREHLKHGDVSWFEK 162
Query: 169 T---LP----FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 221
+P RP LIEF + + IS + NSP WN+ N+ + +I P D
Sbjct: 163 NWKGIPPANGMPRPWLIEFDHVQGGNISQLHIINSPMWNLVLRNSENIDVSRSSIFNPPD 222
Query: 222 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 281
SPNTDGID SS N+ + +STGDD +A+KSG G A PSS I I +
Sbjct: 223 SPNTDGIDVVSSKNISLRHLKLSTGDDDIAIKSGLASTGKAP--PSSNINIDDIDIYRGH 280
Query: 282 SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 341
G++VGSET+ G+ V +++ G+ +K+ RG I I+ ++ M + +
Sbjct: 281 -GLSVGSETANGIGRVTMQNVRFNGTDNGLRIKSGRDRGNQIGPISADNITMNHVNVPLV 339
Query: 342 IAGDVGDH-----------PDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT 390
I G + P + + P ++ +TI+ + T +G+I GL +P
Sbjct: 340 ITDSYGGNGGYSSKSLTSIPTSAIS-SLTPFIHDVTIQHLTATNSGMAGIISGLPEAPLQ 398
Query: 391 GICLSNINLQGVAG 404
I L +I++ G
Sbjct: 399 NITLKDIHIDATHG 412
>gi|313221288|emb|CBY32045.1| unnamed protein product [Oikopleura dioica]
Length = 278
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/224 (38%), Positives = 125/224 (55%), Gaps = 8/224 (3%)
Query: 76 LYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRE----RPGG 131
+Y P S L S++TL KG I A+ + ++ ++ LPSY R+
Sbjct: 55 VYFPAEKIEIASLELRSNLTLNFPKGCEIIASANEDDYQIMPTLPSYCIARDGLAASKDA 114
Query: 132 RYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 191
Y S +G+ +++VV TGE G I+G+G WW Q L F RP L + + ++ I +
Sbjct: 115 LYRSVFYGENVENVVFTGE-GLINGEGVNWWTRNSQ-NLKFERPRLFQCLFCKNFKIEKL 172
Query: 192 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 251
++NSPFW IH VY N+ I V ILA +S NTDGID DSSSNV I D ++ GDD++A
Sbjct: 173 TWKNSPFWTIHFVYSENIEIADVAILAEHESRNTDGIDIDSSSNVHIHDVFVDVGDDVIA 232
Query: 252 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVE 295
+KSG+D G +G P+ + + + A+GSE SGGV+
Sbjct: 233 LKSGFDFCGREFGMPTKNVLVENSVFIN--ENFAIGSEMSGGVQ 274
>gi|198276929|ref|ZP_03209460.1| hypothetical protein BACPLE_03134 [Bacteroides plebeius DSM 17135]
gi|198270454|gb|EDY94724.1| polygalacturonase (pectinase) [Bacteroides plebeius DSM 17135]
Length = 461
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 187/416 (44%), Gaps = 48/416 (11%)
Query: 18 FSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLY 77
F + SV C+ + N + IT +G LNT+AF +AI + R+GG +
Sbjct: 21 FPMDSVYLCT------FPNKEFPITKYGARKGNNHLNTQAFAKAI---EACNRAGGGRVV 71
Query: 78 VPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFI 137
VP G + TG +L SH+ L+L +GAV++ + D N L A + S+ G E Y I
Sbjct: 72 VPAGEWFTGPIHLKSHVNLFLEEGAVVRFS-DNPNDYLPAVMTSW-EGLE--CYNYSPLI 127
Query: 138 HGDGLQDVVITGENGTIDGQGAIWWNMW------------------------RQRTLP-- 171
+ ++V I+G+ GT+ W W +QR +
Sbjct: 128 YAFECENVGISGK-GTL-APVMDTWRTWFKRPEAHLNALRQLYSMGSTDVPVKQRQMAKG 185
Query: 172 --FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 229
RP+LI F ++I++ + + SPFW IH C++ V+R++ + A N DGID
Sbjct: 186 ENHLRPHLIHFNRCKNILLEDFHIRQSPFWTIHLYLCNSGVVRHLDV--QAHGHNNDGID 243
Query: 230 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 289
+ S N IE+ GDD V +K+G ++ PS I +R + + + +GSE
Sbjct: 244 LEMSRNFLIENCKFDQGDDAVVIKAGRNQDAWRLNTPSENIVVRDCDILNGHTLLGIGSE 303
Query: 290 TSGGVENVLAEHINL-YNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGD 348
SGGV N+ NV +KTN RGGFI NI + D+ + + ++ DV
Sbjct: 304 ISGGVRNIYMTRCKAPQNVHRLFFLKTNHRRGGFIENIYLEDIEAGDMLRTFEVDTDVLY 363
Query: 349 HPDDKF--NPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 402
D + ++GI +K++ ++G P + + N+ + V
Sbjct: 364 QWKDLVPTYETRITRIDGIHVKNIHCQSADAIYELKGDARLPIRNVFVENVKVDTV 419
>gi|407700483|ref|YP_006825270.1| glycoside hydrolase family protein [Alteromonas macleodii str.
'Black Sea 11']
gi|407249630|gb|AFT78815.1| glycoside hydrolase family 28 domain-containing protein
[Alteromonas macleodii str. 'Black Sea 11']
Length = 488
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 190/403 (47%), Gaps = 64/403 (15%)
Query: 45 GGVGDGKTLNTKAFREAIY-RIQHLRRSGGTLLYVPPGVYL-TGSFNLTSHMTLYLAKGA 102
V D ++ F++A++ I + GG + VP G +L G +L S++ L++ GA
Sbjct: 72 ANVVDFLAIHNNDFKQALHDAISQIASQGGGKVVVPKGNWLCKGPIHLQSNINLHVELGA 131
Query: 103 VIKATQDTWNW-PLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAI- 160
I+ + + ++ P + + G E G Y I+ ++ ITG+ GT+DG A
Sbjct: 132 TIQFSTNPDDYKPYVF---TRWEGMELMG--YSPLIYAYEQTNIAITGK-GTLDGCAAKD 185
Query: 161 -WW---NMWR-----------------------QRTLP---------FTRPNLIEFMNSR 184
WW W+ +R P + RP I+
Sbjct: 186 NWWPWKGKWKASTWGDDPVENQKYTRDTLQEMVERGTPVSERVFEKNYLRPPFIQPYRCE 245
Query: 185 SIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYIS 244
+++I V SPFW ++PV C NV + + + PN+DG DP+S +NV I +
Sbjct: 246 NVLIEGVTILRSPFWLVNPVLCKNVTVN--DVYCKSFGPNSDGCDPESCTNVIISNCTFD 303
Query: 245 TGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINL 304
TGDD +A+KSG + G P S I I + G+ +GSE SGGVEN+ A++ +
Sbjct: 304 TGDDCIAIKSGRNADGRRVNVPCSNIIIEHCEMKAGHGGVVIGSEISGGVENLYAQYCTM 363
Query: 305 Y--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-----AGDVGDHPDDKFNPN 357
++ GI +KTN RGG ++N+ ++ + + + + GD G+ P
Sbjct: 364 SSPDLDRGIRIKTNSIRGGHLKNLNYRNIDIGTVKDAVVVNFFYEEGDAGNFP------- 416
Query: 358 ALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 400
P++ ITI+++ ++ +++G ++P +G+ L+N+ ++
Sbjct: 417 --PLLEDITIENLNVVSANRAFVLRGYDHTPISGLTLNNVTIK 457
>gi|374311248|ref|YP_005057678.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358753258|gb|AEU36648.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 461
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 162/319 (50%), Gaps = 26/319 (8%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
++DFG GDG TL++ A + AI H SGGT++ VP G YL GS + S +TL +
Sbjct: 36 KVSDFGAKGDGTTLDSPAIQRAIDAASH---SGGTVI-VPAGTYLCGSIFVKSGVTLQIE 91
Query: 100 KGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGA 159
K A I+ +Q ++PL +P+ G E + ++ Q GTIDG G
Sbjct: 92 KDATIRGSQKITDYPL---MPTRVAGIEMTWPAALVNVYE---QKNAAITGGGTIDGDGK 145
Query: 160 IWWNMWRQRTLPF-------------TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYC 206
I+W+ +R + RP L++ NS I +S ++ + S FW +H Y
Sbjct: 146 IFWDSYRTLRSDYDPKGLRWAADYDAKRPRLVQIFNSDHIKLSGLMLKRSGFWTVHICYS 205
Query: 207 SNVVIRYVTILAPADS--PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYG 264
++ + VTI D P+TDGID DSS + ++ + IS DD + +K+G D G+
Sbjct: 206 HDIEVDGVTIRNNEDGKGPSTDGIDIDSSKKILVQHADISVNDDALCLKAGRDSDGLRVN 265
Query: 265 HPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHIN-LYNVGVGIHVKTNIGRGGFI 323
P+ + ++ + +G+ GSETSGG NV A I L V VGI K+ RGG+
Sbjct: 266 RPTEDVVLKDSVVRAGAAGVTFGSETSGGFRNVEAYGITVLKPVPVGILFKSAHTRGGWA 325
Query: 324 RNITVSDVYMENARKGIKI 342
+I + D+ +++ I++
Sbjct: 326 EDIRIHDMDLKDVAVAIRV 344
>gi|423112756|ref|ZP_17100447.1| hypothetical protein HMPREF9689_00504 [Klebsiella oxytoca 10-5245]
gi|376390250|gb|EHT02936.1| hypothetical protein HMPREF9689_00504 [Klebsiella oxytoca 10-5245]
Length = 460
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 121/413 (29%), Positives = 187/413 (45%), Gaps = 63/413 (15%)
Query: 37 DKI-SITDFGGVGDGK--TLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSH 93
DK+ IT +G G LNT A ++AI +GG + VP G +LT L ++
Sbjct: 33 DKVCDITHYGAEGHRLQIALNTDAIQKAI---DDCAAAGGGTVLVPKGNFLTNPLFLKNN 89
Query: 94 MTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRY-------MSFIHGDGLQDVV 146
+ L L K A + A+ + + RG ++ RY + FI Q+V
Sbjct: 90 IQLKLEKDATLVASTEVAAY----------RGDDKT--RYAEAENGWLPFISIADAQNVA 137
Query: 147 ITGENGTIDGQGAIWWNMWRQRTLPF------TRPNLIEFMNSRSIIISNVIFQNSPFWN 200
I GE GTIDGQGA+WW WR+ RP LI + +++I V +SP ++
Sbjct: 138 IVGE-GTIDGQGAVWWERWRENIRATGKKGGTDRPRLIYITRASNVLIDGVTLTHSPSFH 196
Query: 201 IHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 260
+ Y +V I IL+P +PNTD IDP S N+ I ++YI DD +A+K+ +
Sbjct: 197 VVTRYAHDVDINGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAIKAEKADPR 256
Query: 261 IAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 320
G I I T GI++GSE++GGV NVL E+ GI +K+ G+G
Sbjct: 257 FPDG-VVDNIYIANNTLKQG-RGISIGSESAGGVNNVLVENNTFEGSMYGIRIKSPRGKG 314
Query: 321 GFIRNITVSDVYMENAR--------------------KGIKIAG-DVGDH-------PDD 352
G ++NI + M N K ++ G +G+ P
Sbjct: 315 GEVKNIVYRNTRMHNVEVPLVFSAYYKAAPIVQAEVDKLLQAGGFTLGEQIYPPDSDPKQ 374
Query: 353 KFNPNALPVVNGITIKDVWGT-KVQQSGLIQGLKNSPFTGICLSNINLQGVAG 404
F+ P + IT++++ T + + I G +P +G SN+N++ G
Sbjct: 375 PFDKYKTPHFSNITVENLTSTGDSKAAAYIIGTPEAPLSGFHFSNVNIEADRG 427
>gi|414071001|ref|ZP_11406978.1| glycoside hydrolase [Pseudoalteromonas sp. Bsw20308]
gi|410806622|gb|EKS12611.1| glycoside hydrolase [Pseudoalteromonas sp. Bsw20308]
Length = 489
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 115/436 (26%), Positives = 194/436 (44%), Gaps = 71/436 (16%)
Query: 18 FSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLY 77
+ +A + S VP + + +I DFG G+ KT NT A AI + GG +
Sbjct: 43 WKMADAIKSSIKVP-SFPDKTFNIIDFGANGNNKTNNTVAINNAI---KSCNAQGGGQVI 98
Query: 78 VPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFI 137
+P G ++TG+ +L S++ L+L +GA++ + ++ + + + G E G Y I
Sbjct: 99 IPQGQFITGAIHLLSNVNLHLEEGAILSFSTSPEDY--LPAVFTRWEGLEMMG--YSPLI 154
Query: 138 HGDGLQDVVITGENGTIDGQG--AIWW-------------------NMWRQRTL------ 170
+ +++ ITG+ G ++G WW + Q+T
Sbjct: 155 YAFEQENIAITGK-GILEGNANNTTWWPWKGKHKEAHWELLTDNNGQIIEQKTARDKLMR 213
Query: 171 ----------------PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
+ RP I+ +++I + +NSPFW ++PV C++V + V
Sbjct: 214 DAEQHIPVEQRIYADGAYLRPPFIQPYRCNNVLIEGITIKNSPFWLVNPVLCNSVTVCDV 273
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
T + PN+DG DP+S ++V I++ TGDD +A+KSG + G S I I
Sbjct: 274 TF--SSHGPNSDGCDPESCNHVHIKNCVFDTGDDCIAIKSGRNADGRRVNTASQNIVIEN 331
Query: 275 VTGSSPFSGIAVGSETSGGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVY 332
G+ +GSE SGGV NV ++ + ++ I +KTN RGG I +I + ++
Sbjct: 332 CHMKEGHGGVVIGSEISGGVNNVFVQNCTMDSPHLERAIRIKTNSVRGGLIEHIRIRNIE 391
Query: 333 MENARKGIKI-----AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL-IQGLKN 386
+ + I I GD G +F+ P+V I I ++ V L + G
Sbjct: 392 VGTVKNAIVINFYYEEGDAG-----QFD----PIVRDIKIDNLHCKNVLSKALYLNGFAR 442
Query: 387 SPFTGICLSNINLQGV 402
P I L+N + V
Sbjct: 443 DPIKDITLTNSHFDQV 458
>gi|336429336|ref|ZP_08609303.1| hypothetical protein HMPREF0994_05309 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336002947|gb|EGN33044.1| hypothetical protein HMPREF0994_05309 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 521
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/308 (31%), Positives = 147/308 (47%), Gaps = 22/308 (7%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+++ DFG G+G+ +T + AI R + +PPG Y S L S+ L L
Sbjct: 83 LNVRDFGASGEGERDDTVFIQAAIMACPPEGR-----VVIPPGKYRVTSLFLKSNSNLEL 137
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRE---------RPGGRYMSFIHGDGLQDVVITG 149
+GAV+ P++ L S G+G Y + G G ++V + G
Sbjct: 138 EEGAVLIYDGRPGRLPILPGLLS-GKGENSLALGSWEGEAADMYAALFTGCGAENVNLYG 196
Query: 150 ENGTIDGQGAI--WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCS 207
+ G I G ++ WW+ +++ P RP ++ + + I + + F P W IHP +CS
Sbjct: 197 K-GEILGGASMEDWWSEENRQSSPH-RPRMLFLTHCKHIRVQGLRFSMCPSWCIHPCFCS 254
Query: 208 NVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPS 267
++ I V I+ P DSPNTDGI+P+S +V I + S GDD +A+KSG P
Sbjct: 255 DLGIYDVEIINPEDSPNTDGINPESCEHVEIAGCHFSLGDDCIAIKSGKGRRAQENPVPG 314
Query: 268 SGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 327
S I IR+ + G+ +GSE S GV +V N G+ +KT GRG ++
Sbjct: 315 SHIQIRQCFMENGHGGVTIGSEISSGVHHVTVRDCCFRNTDRGLRIKTRRGRG---KSCV 371
Query: 328 VSDVYMEN 335
V V EN
Sbjct: 372 VDAVLFEN 379
>gi|315499125|ref|YP_004087929.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
gi|315417137|gb|ADU13778.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
Length = 512
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 110/396 (27%), Positives = 170/396 (42%), Gaps = 33/396 (8%)
Query: 44 FGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAV 103
FG GDG + +T A + A+ G L+ + G YL+ L S M + L +GA
Sbjct: 83 FGAKGDGVSDDTAALQAALMAC-----PPGGLVRLEAGRYLSAPLFLKSDMAVELCEGAH 137
Query: 104 IKATQDTWNWPLI-APLPS--------YGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
I +D WP++ LP G + + Q+V I G G +
Sbjct: 138 ILGHRDITKWPVLPGVLPDAEGVKHTCLGSWEGEADACHAGLFNLLFAQNVQIYGR-GVM 196
Query: 155 DGQGAI--WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIR 212
D Q WW + R + + RP LI + +I+ + +NSP W +HP++ +
Sbjct: 197 DAQAGFDTWWERPKARFIGW-RPRLIFMVECEQVILQGMTLKNSPSWTVHPLFSRGLTFV 255
Query: 213 YVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITI 272
+ I APADSPNTDG++P+SS+++ I + GDD +A+KSG P+ + I
Sbjct: 256 DLRIEAPADSPNTDGLNPESSTDIVISGVDFAVGDDCIALKSGKISMARRSVRPTRRVRI 315
Query: 273 RRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG--GFIRNITVSD 330
+ +GSE + GV ++ + N GI +KT GRG IR +
Sbjct: 316 SNCRMKDGHGAVVIGSEMACGVYDISVQTCLFINTDRGIRLKTRRGRGREAVIRGLNCRH 375
Query: 331 VYMENARKGIKIAGDVGDHPDDKF------NPNAL----PVVNGITIKDVWGTKVQQSGL 380
+ ME I PD K NP + P + I + + V+ +GL
Sbjct: 376 IRMEGVGSAFVINSFYWCDPDGKTDEVADRNPRPVDEGTPSIGDIRLSHIDAIGVRHAGL 435
Query: 381 -IQGLKNSPFTGICLSNINLQ--GVAGPTSPPLKCS 413
+ GL P G+ L +I L+ A P P + S
Sbjct: 436 YVLGLPEQPVDGLTLDHIRLRFDPQAKPGEPDMAAS 471
>gi|347537471|ref|YP_004844896.1| glycoside hydrolase family protein [Flavobacterium branchiophilum
FL-15]
gi|345530629|emb|CCB70659.1| Glycoside hydrolase precursor, family 28 [Flavobacterium
branchiophilum FL-15]
Length = 475
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 112/414 (27%), Positives = 190/414 (45%), Gaps = 58/414 (14%)
Query: 29 IVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSF 88
+ P + N ++ D+G + DG NT F + I + GG ++ +P G Y TG
Sbjct: 47 VQPPVFPNKTFNVMDYGAISDGVFDNTVVFNKTI---KTCSEKGGGMVLIPKGTYFTGPI 103
Query: 89 NLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVIT 148
+L +++ L+L++GA I + + ++PL+ + G E Y I+ +V IT
Sbjct: 104 HLDNNVNLHLSEGAEIVFSTNPKDYPLVH---TSFEGTELM--NYSPLIYAYNKTNVAIT 158
Query: 149 GENGTIDGQGAI--WWNM-------WRQ----------------------RTL---PFTR 174
G+ G ++G+ + WW W++ R + R
Sbjct: 159 GK-GILNGKASNDNWWPWCGKSVYGWKKGDPIQNVKQLMESAEKGMAVKDRVFGDGNYLR 217
Query: 175 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 234
PN IEF +++ + + N+PFW IHP+ ++V++ + I + PN DG DP+ S
Sbjct: 218 PNFIEFFECKNVHLKDFKIVNAPFWIIHPIKSNHVIVDGIHI--ESHGPNNDGCDPEYSK 275
Query: 235 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 294
NV I + TGDD +A+K+G D G S I I+ G+ +GSE S GV
Sbjct: 276 NVIIRNCTFDTGDDCIAIKAGRDSDGRRVAIKSENILIQNCKMFDGHGGVTIGSEISAGV 335
Query: 295 ENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK---GIKIAGDVGDH 349
NV E+ ++ + I +K+N RGG I NI V ++ + ++ GI + V +
Sbjct: 336 SNVFVENCIMDSPELDRAIRIKSNTRRGGIIENIYVRNITVGEVKESVLGIDLHYGVHGN 395
Query: 350 PDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 403
F +P+V I I++ + ++ GL G+ G +SNI + V
Sbjct: 396 QTGTF----MPIVRNIFIEN---STIKNGGL-YGILAKGHPGFPISNIRFKEVT 441
>gi|430854301|ref|ZP_19472017.1| glycosyl hydrolase [Enterococcus faecium E1258]
gi|430539030|gb|ELA79293.1| glycosyl hydrolase [Enterococcus faecium E1258]
Length = 436
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 139/281 (49%), Gaps = 35/281 (12%)
Query: 76 LYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYM- 134
+++P G+YL G+ L L +GAV+K D +P I R G M
Sbjct: 40 VFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPEIDT---------RVAGVEMK 90
Query: 135 ---SFIHGDGLQDVVITGENGTIDGQGAIWWNMW-------------RQRTL------PF 172
+ ++ +D++I G+ IDGQG WW ++ Q+ L
Sbjct: 91 WPAAILNVLSAKDILIEGKR-IIDGQGDHWWELYWGKDQKSGTRAEYDQKGLRWIADYAI 149
Query: 173 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDS 232
RP ++ +++ ++IFQ S FWN+ Y ++V++ V I+ D P+TDGID DS
Sbjct: 150 KRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IICNNDGPSTDGIDIDS 208
Query: 233 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSG 292
S+NV + + ++ GDD +A+KSG D G SS I + R S + G+ +GSE S
Sbjct: 209 STNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGY-GVTIGSEVSA 267
Query: 293 GVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
GV +V I+ + GI +K++ RGG I NI V ++ M
Sbjct: 268 GVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNM 308
>gi|423301906|ref|ZP_17279929.1| hypothetical protein HMPREF1057_03070 [Bacteroides finegoldii
CL09T03C10]
gi|408470997|gb|EKJ89529.1| hypothetical protein HMPREF1057_03070 [Bacteroides finegoldii
CL09T03C10]
Length = 489
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 167/345 (48%), Gaps = 36/345 (10%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
++D I TDFG D L+T+ + AI GG + +P GVY G+ + S +
Sbjct: 51 KSDCIHATDFGLKSDTSVLSTRFVQSAI---DACHEKGGGTVIIPSGVYRIGALFIKSGV 107
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSF----IHGDGLQDVVITGE 150
L+L+KG + A++D ++P PS R G M++ ++ ++ +TGE
Sbjct: 108 NLHLSKGTTLIASEDIRDYP---EFPS------RIAGIEMTWPSAVLNIMDAENAALTGE 158
Query: 151 NGTIDGQGAIWWNMWRQRTLPFTRPNL-------------IEFMNSRSIIISNVIFQNSP 197
G ID +G ++W+ + + + + L I NS+ I + + +
Sbjct: 159 -GFIDCRGKVFWDKYWEMRKEYEKKKLRWIVDYDCKRVRGILVSNSKHITLKDFTLVRTG 217
Query: 198 FWNIHPVYCSNVVIRYVTIL--APADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSG 255
FW +Y + + VTI P+TDGID DSS+N+ +E+ + DD + +K+G
Sbjct: 218 FWACQILYSDHCSVDGVTINNNVGGHGPSTDGIDIDSSTNILVENCEVDCNDDNICIKAG 277
Query: 256 WDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKT 315
D G+ P+ + IR T + GSETSG + NVLA + Y G + +K+
Sbjct: 278 RDADGLRVNRPTENVVIRNCTARKGAGLVTCGSETSGSIRNVLAYDLKAYGTGAALRLKS 337
Query: 316 NIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALP 360
++ RGG + NI ++ V ++ +K VG + + K++ +ALP
Sbjct: 338 SMNRGGTVENIYMTRVKADS----VKYVLAVGLNWNPKYSYSALP 378
>gi|255034418|ref|YP_003085039.1| glycoside hydrolase [Dyadobacter fermentans DSM 18053]
gi|254947174|gb|ACT91874.1| glycoside hydrolase family 28 [Dyadobacter fermentans DSM 18053]
Length = 528
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 179/392 (45%), Gaps = 48/392 (12%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
I ITD G + TKA + AI + ++ GGT++ VP G + TG +L S++ L++
Sbjct: 72 IRITDKGA--RAGAMATKAIQSAIDEVS--KKKGGTVI-VPAGTWRTGRISLKSNVNLHI 126
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSF---IHGDGLQDVVITGEN---G 152
++GA ++ + + ++ LP+ E G MS I+ +G +++ +TG+ G
Sbjct: 127 SEGAELRFSPEIEDY-----LPAVFTRNE--GVELMSLGALIYANGQENIAVTGKGKLVG 179
Query: 153 TIDG---QGAIWWNMWRQRTLPFTRP-----------------NLIEFMNSRSIIISNVI 192
DG Q + N+ ++ +P +P I +N + + I +
Sbjct: 180 PPDGPVRQRYMNVNVI-EKVVPADKPVSERVYEGKDGGFIFPPMFISPINCKKVYIEGIT 238
Query: 193 FQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAV 252
N+PFWN+ PVYC NV+IR +T+ + P DGID +SS NV IE +S+GDD +
Sbjct: 239 LHNTPFWNVVPVYCDNVIIRGITVQS-VGIPRGDGIDIESSRNVLIEYCTLSSGDDCFTI 297
Query: 253 KSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 312
K+G E GI P+ + IR GI GSET+G + NV + G+
Sbjct: 298 KAGRGEDGIRVNKPTENVVIRHCLAREGHGGITCGSETAGMIRNVYVRDCVFDDTDTGLR 357
Query: 313 VKTNIGRGGFIRNITVSDVYMENARKGIKI--------AGDVGDHPDDKFNPNALPVVNG 364
KT R G NI ++ M +K G++ D + + P
Sbjct: 358 FKTRRSRAGGGENIVYENIRMNLRGDAVKFDMLGSRQYVGELADRLPPRPVNDLTPAYRN 417
Query: 365 ITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 396
IT +++ K + I G+ SP + + N
Sbjct: 418 ITARNIVVDKARTFIDITGIPESPAANLLIEN 449
>gi|293379024|ref|ZP_06625177.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
gi|292642303|gb|EFF60460.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
Length = 436
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 140/281 (49%), Gaps = 35/281 (12%)
Query: 76 LYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYM- 134
+++P G+YL G+ L L +GAV+K + +P I R G M
Sbjct: 40 VFIPKGIYLVGALFLKDKSHLIFEEGAVLKGKTEIEAFPEIDT---------RVAGVEMK 90
Query: 135 ---SFIHGDGLQDVVITGENGTIDGQGAIWWNMW---RQRT----------------LPF 172
+ ++ +D++I G+ G IDGQG WW ++ Q++
Sbjct: 91 WPAAILNVLSAKDILIEGK-GIIDGQGEHWWELYWGKDQKSGTRAEYDRKGLRWIADYAI 149
Query: 173 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDS 232
RP ++ ++I ++IFQ S FWN+ Y ++V++ + I+ D P+TDGID DS
Sbjct: 150 KRPRACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKI-IIRHNDGPSTDGIDIDS 208
Query: 233 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSG 292
S++V I + ++ GDD +A+KSG D G SS I I R S + G+ +GSE S
Sbjct: 209 STDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGY-GVTIGSEVSA 267
Query: 293 GVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
GV +V I+ + GI +K++ RGG I NI V ++ M
Sbjct: 268 GVSDVYIHDIDFFQSDCGIRMKSSRKRGGVIENIRVENLNM 308
>gi|431758794|ref|ZP_19547417.1| glycosyl hydrolase [Enterococcus faecium E3083]
gi|430616609|gb|ELB53505.1| glycosyl hydrolase [Enterococcus faecium E3083]
Length = 436
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 140/281 (49%), Gaps = 35/281 (12%)
Query: 76 LYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYM- 134
+++P G+YL G+ L L +GAV+K + +P I R G M
Sbjct: 40 VFIPKGIYLVGALFLKDKSHLIFEEGAVLKGKTEIEAFPEIDT---------RVAGVEMK 90
Query: 135 ---SFIHGDGLQDVVITGENGTIDGQGAIWWNMW---RQRT----------------LPF 172
+ ++ +D++I G+ G IDGQG WW ++ Q++
Sbjct: 91 WPAAILNVLSAKDILIEGK-GIIDGQGEHWWELYWGKDQKSGTRAEYDRKVLRWIADYAI 149
Query: 173 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDS 232
RP ++ ++I ++IFQ S FWN+ Y ++V++ + I+ D P+TDGID DS
Sbjct: 150 KRPRACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKI-IIRHNDGPSTDGIDIDS 208
Query: 233 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSG 292
S++V I + ++ GDD +A+KSG D G SS I I R S + G+ +GSE S
Sbjct: 209 STDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGY-GVTIGSEVSA 267
Query: 293 GVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
GV +V I+ + GI +K++ RGG I NI V ++ M
Sbjct: 268 GVSDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNM 308
>gi|424764550|ref|ZP_18191970.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|431050708|ref|ZP_19493377.1| glycosyl hydrolase [Enterococcus faecium E1590]
gi|431764023|ref|ZP_19552569.1| glycosyl hydrolase [Enterococcus faecium E3548]
gi|402419033|gb|EJV51317.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|430560246|gb|ELA99550.1| glycosyl hydrolase [Enterococcus faecium E1590]
gi|430621327|gb|ELB58094.1| glycosyl hydrolase [Enterococcus faecium E3548]
Length = 436
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 140/281 (49%), Gaps = 35/281 (12%)
Query: 76 LYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYM- 134
+++P G+YL G+ L L +GAV+K + +P I R G M
Sbjct: 40 VFIPKGIYLVGALFLKDKSHLIFEEGAVLKGKTEIEAFPEIDT---------RVAGVEMK 90
Query: 135 ---SFIHGDGLQDVVITGENGTIDGQGAIWWNMW---RQRT----------------LPF 172
+ ++ +D++I G+ G IDGQG WW ++ Q++
Sbjct: 91 WPAAILNVLSAKDILIEGK-GIIDGQGEHWWELYWGKDQKSGTRAEYDRKGLRWIADYAI 149
Query: 173 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDS 232
RP ++ ++I ++IFQ S FWN+ Y ++V++ + I+ D P+TDGID DS
Sbjct: 150 KRPRACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKI-IIRHNDGPSTDGIDIDS 208
Query: 233 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSG 292
S++V I + ++ GDD +A+KSG D G SS I I R S + G+ +GSE S
Sbjct: 209 STDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGY-GVTIGSEVSA 267
Query: 293 GVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
GV +V I+ + GI +K++ RGG I NI V ++ M
Sbjct: 268 GVSDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNM 308
>gi|430837659|ref|ZP_19455621.1| glycosyl hydrolase [Enterococcus faecium E0680]
gi|430840340|ref|ZP_19458267.1| glycosyl hydrolase [Enterococcus faecium E0688]
gi|430859280|ref|ZP_19476893.1| glycosyl hydrolase [Enterococcus faecium E1552]
gi|430487173|gb|ELA63943.1| glycosyl hydrolase [Enterococcus faecium E0680]
gi|430489826|gb|ELA66401.1| glycosyl hydrolase [Enterococcus faecium E0688]
gi|430544024|gb|ELA84074.1| glycosyl hydrolase [Enterococcus faecium E1552]
Length = 436
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 139/281 (49%), Gaps = 35/281 (12%)
Query: 76 LYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYM- 134
+++P G+YL G+ L L +GAV+K D +P I R G M
Sbjct: 40 VFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPEIDT---------RVAGVEMK 90
Query: 135 ---SFIHGDGLQDVVITGENGTIDGQGAIWWNMW-------------RQRTL------PF 172
+ ++ +D++I G+ G IDGQG WW ++ Q+ L
Sbjct: 91 WPAAILNVLSAKDILIEGK-GIIDGQGDHWWELYWGKDQKSGTRAEYDQKGLRWIADYAI 149
Query: 173 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDS 232
RP ++ +++ ++IFQ S FWN+ Y ++V++ V I+ D P+TDGID D
Sbjct: 150 KRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDY 208
Query: 233 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSG 292
S+NV + + ++ GDD +A+KSG D G SS I + R S + G+ +GSE S
Sbjct: 209 STNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGY-GVTIGSEVSA 267
Query: 293 GVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
GV +V I+ + GI +K++ RGG I NI V ++ M
Sbjct: 268 GVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNM 308
>gi|425057510|ref|ZP_18460923.1| polygalacturonase [Enterococcus faecium 504]
gi|403040305|gb|EJY51392.1| polygalacturonase [Enterococcus faecium 504]
Length = 436
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 139/281 (49%), Gaps = 35/281 (12%)
Query: 76 LYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYM- 134
+++P G+YL G+ L L +GAV+K D +P I R G M
Sbjct: 40 VFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPEIDT---------RVAGVEMK 90
Query: 135 ---SFIHGDGLQDVVITGENGTIDGQGAIWWNMW-------------RQRTL------PF 172
+ ++ +D++I G+ G IDGQG WW ++ Q+ L
Sbjct: 91 WPAAILNVLSAKDILIEGK-GIIDGQGDHWWELYWGKDQKSGTRAEYDQKGLRWIADYAI 149
Query: 173 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDS 232
RP ++ +++ ++IFQ S FWN+ Y ++V++ V I+ D P+TDGID DS
Sbjct: 150 KRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDS 208
Query: 233 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSG 292
S+NV + + ++ GDD +A+KSG D G SS I + R S + G+ +GSE S
Sbjct: 209 STNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGY-GVTIGSEVSA 267
Query: 293 GVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
GV +V I+ + GI +K++ RG I NI V ++ M
Sbjct: 268 GVSDVYIHDIDFFQSDCGIRMKSSKERGEVIENIRVENLNM 308
>gi|227550317|ref|ZP_03980366.1| pectin lyase [Enterococcus faecium TX1330]
gi|227180577|gb|EEI61549.1| pectin lyase [Enterococcus faecium TX1330]
Length = 436
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 140/281 (49%), Gaps = 35/281 (12%)
Query: 76 LYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYM- 134
+++P G+YL G+ L L +GAV+K + +P I R G M
Sbjct: 40 VFIPKGIYLVGALFLKDKSHLIFEEGAVLKGKTEIEAFPEIDT---------RVAGVEMK 90
Query: 135 ---SFIHGDGLQDVVITGENGTIDGQGAIWWNMW---RQRT----------------LPF 172
+ ++ +D++I G+ G IDGQG WW ++ Q++
Sbjct: 91 WPAAILNVLSAKDILIEGK-GIIDGQGEHWWELYWGEDQKSGTRAEYDRKGLRWIADYAI 149
Query: 173 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDS 232
RP ++ ++I ++IFQ S FWN+ Y ++V++ + I+ D P+TDGID DS
Sbjct: 150 KRPRACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKI-IIRHNDGPSTDGIDIDS 208
Query: 233 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSG 292
S++V I + ++ GDD +A+KSG D G SS I I R S + G+ +GSE S
Sbjct: 209 STDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGY-GVTIGSEVSA 267
Query: 293 GVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
GV +V I+ + GI +K++ RGG I NI V ++ M
Sbjct: 268 GVSDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNM 308
>gi|300726353|ref|ZP_07059805.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
gi|299776378|gb|EFI72936.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
Length = 464
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 184/424 (43%), Gaps = 53/424 (12%)
Query: 8 LSILLSYFNCFSLASVVT-CSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQ 66
+++ S +C S AS+ G P + +I+I G +G AF +AI R
Sbjct: 23 IALRDSILSCISGASIANPLKGNSPKNVQ--EINILKMGARNNGTYNCLPAFNKAIRRAS 80
Query: 67 HLRRSGGTLLYVPPGVY-LTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRG 125
+ G + VP G Y L G L S++ + L +GAV+K D +P++
Sbjct: 81 AKK---GVKIIVPKGTYYLCGPIVLRSNVCIDLQEGAVLKFAPDAKYYPMV--------- 128
Query: 126 RERPGGRYM----SFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLP---------- 171
G ++ FI+G +++V ITG+ GTIDG + WR + P
Sbjct: 129 NTSWEGTFLYNHSPFIYGYQVENVAITGK-GTIDGNAMTTFATWRPKQKPAQLLSRQQNH 187
Query: 172 --------------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL 217
+ RP LI+ S++I + V NSPFW IH + N++ R +
Sbjct: 188 EEVPIVQRKFGQGQWLRPQLIQLYQSKNITLEGVKIINSPFWCIHLLKSENIICRRLRY- 246
Query: 218 APADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTG 277
A N DGIDP+ S N+ IED + + GDD VA+KSG D G P+ I IR
Sbjct: 247 -DAKLVNNDGIDPEMSRNILIEDIHFNNGDDNVAIKSGRDNDGWHDACPAENIVIRNCHF 305
Query: 278 SSPFSGIAVGSETSGGVENVLAEHINLYN-VGVGIHVKTNIGRGGFIRNITVSDVYMENA 336
+ +GSE S GV NV E+ + G+ +KTN RGGF+ ++ V++ +
Sbjct: 306 KG-LHAVVIGSEMSAGVRNVFVENCDYAGYCKRGVFIKTNPDRGGFVSHLFVNNCKFDEV 364
Query: 337 RKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLI-QGLKNSPFTGICLS 395
+ + + + + + + KV+ + L+ QG P + +
Sbjct: 365 EDLFYVTSRYAGEGQESMH---FSTIEHLYVDGLSARKVRAAALVLQGTSAKPVQHVSFN 421
Query: 396 NINL 399
I +
Sbjct: 422 AIEV 425
>gi|293571115|ref|ZP_06682155.1| glycoside hydrolase, family 28 [Enterococcus faecium E980]
gi|430842918|ref|ZP_19460825.1| glycosyl hydrolase [Enterococcus faecium E1007]
gi|431064175|ref|ZP_19493522.1| glycosyl hydrolase [Enterococcus faecium E1604]
gi|431130293|ref|ZP_19498935.1| glycosyl hydrolase [Enterococcus faecium E1613]
gi|431739352|ref|ZP_19528287.1| glycosyl hydrolase [Enterococcus faecium E1972]
gi|431742389|ref|ZP_19531282.1| glycosyl hydrolase [Enterococcus faecium E2039]
gi|291608845|gb|EFF38127.1| glycoside hydrolase, family 28 [Enterococcus faecium E980]
gi|430492629|gb|ELA68993.1| glycosyl hydrolase [Enterococcus faecium E1007]
gi|430566194|gb|ELB05313.1| glycosyl hydrolase [Enterococcus faecium E1613]
gi|430568816|gb|ELB07846.1| glycosyl hydrolase [Enterococcus faecium E1604]
gi|430596080|gb|ELB33937.1| glycosyl hydrolase [Enterococcus faecium E1972]
gi|430600147|gb|ELB37805.1| glycosyl hydrolase [Enterococcus faecium E2039]
Length = 443
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 140/281 (49%), Gaps = 35/281 (12%)
Query: 76 LYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYM- 134
+++P G+YL G+ L L +GAV+K + +P I R G M
Sbjct: 47 VFIPKGIYLVGALFLKDKSHLIFEEGAVLKGKTEIEAFPEIDT---------RVAGIEMK 97
Query: 135 ---SFIHGDGLQDVVITGENGTIDGQGAIWWNMW---RQRT----------------LPF 172
+ ++ +D++I G+ G IDGQG WW ++ Q++
Sbjct: 98 WPAAILNVLSAKDILIEGK-GIIDGQGEHWWELYWGKDQKSGTRAEYDRKGLRWIADYAI 156
Query: 173 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDS 232
RP ++ ++I ++IFQ S FWN+ Y ++V++ V I+ D P+TDGID DS
Sbjct: 157 KRPRACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKV-IIRHNDGPSTDGIDIDS 215
Query: 233 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSG 292
S++V I + ++ GDD +A+KSG D G SS I I R S + G+ +GSE S
Sbjct: 216 STDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGY-GVTIGSEVSA 274
Query: 293 GVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
G+ +V I+ + GI +K++ RGG I NI V ++ M
Sbjct: 275 GISDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNM 315
>gi|315570530|gb|ADU33269.1| glycoside hydrolase family protein 28 [Callosobruchus maculatus]
Length = 395
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 177/374 (47%), Gaps = 33/374 (8%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
+T +G G+ +T A AI GG L++ PPG YLTG L S+M + +
Sbjct: 21 DVTKYGADRTGRVPSTDAIARAI---NDAETHGGGLVHFPPGRYLTGPIELKSNMIMDVG 77
Query: 100 KGAVIKATQDTWNWP-LIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
G +I D +P L LP G+ R P + I G ++V I G N DG+G
Sbjct: 78 DGTIITFLDDPALYPPLHGKLPD-GQRRILP---FTPLIRAWGQKNVGIRG-NVIFDGRG 132
Query: 159 AIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILA 218
+WW+ + P TRP I F + ++++ ++SP +N++ +Y + +VI + I
Sbjct: 133 EVWWD---RLPPPATRPIFINFFDCHNVVLKGFTIKSSPMFNVNILYSNGIVIDGIRIRN 189
Query: 219 P----ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH-----PSSG 269
P PNTDGI+ S + I ++TGDD +A+ A+GH P+
Sbjct: 190 PESYHGKGPNTDGINVVSVRRLHITGVDVATGDDCIAIN--------AWGHGKERIPTED 241
Query: 270 ITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVS 329
+ I S G+++GS T+GG+ N+ + G+ +KTN RGG I +I
Sbjct: 242 VLIEDSHMSIGHGGVSIGSVTAGGLRNITVRNCVFDGTTRGLLIKTNRERGGTIEDIHYE 301
Query: 330 DVYMENAR-KGIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKN 386
++ M N R +GI I D+ + D P + P V I +V G+ + ++ GL
Sbjct: 302 NIVMNNMRWEGIAIT-DLYNDKDSGRKPIGDQTPFVRNIKYNNVRGSSKKSPIMLIGLPE 360
Query: 387 SPFTGICLSNINLQ 400
+P I + N +++
Sbjct: 361 APVENIEIENCDIR 374
>gi|237721278|ref|ZP_04551759.1| LOW QUALITY PROTEIN: glycoside hydrolase family 28 protein
[Bacteroides sp. 2_2_4]
gi|229449074|gb|EEO54865.1| LOW QUALITY PROTEIN: glycoside hydrolase family 28 protein
[Bacteroides sp. 2_2_4]
Length = 380
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 141/290 (48%), Gaps = 43/290 (14%)
Query: 136 FIHGDGLQDVVITGENGTIDGQGAI--WWNM-------W-----------RQRTLPF--- 172
I+ G ++ ITG+ G IDGQG++ WW M W R+R L +
Sbjct: 52 LIYAYGESNIAITGK-GIIDGQGSMETWWPMCGAVKYGWKEGMVAQRNGGRERLLMYGET 110
Query: 173 --------------TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILA 218
RP L+ + +I+I V NSPFW IHP++C ++++ VT+
Sbjct: 111 STPVYKRLMKPEDGMRPQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFN 170
Query: 219 PADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGS 278
PN DG DP+S NV IE+ TGDD +A+KSG +E G + PS I +R
Sbjct: 171 RG--PNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMR 228
Query: 279 SPFSGIAVGSETSGGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENA 336
+ G+ +GSE SGG N+ E + N+ I +KT+ RGG I N+ V +V +
Sbjct: 229 NGHGGVVIGSEISGGYRNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVFVRNVTVGQC 288
Query: 337 RKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 386
R+ + + ++ +K P+V + +K+V K + LI GL++
Sbjct: 289 REAV-LRINLQYENREKCKRGFDPIVRNVHLKNVTCEKSKLGVLIIGLED 337
>gi|423221752|ref|ZP_17208222.1| hypothetical protein HMPREF1062_00408 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392645616|gb|EIY39340.1| hypothetical protein HMPREF1062_00408 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 461
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/349 (30%), Positives = 163/349 (46%), Gaps = 51/349 (14%)
Query: 29 IVPMRYRNDKISITDFGGVGDGK-TLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGS 87
IVP + + ITD+ DGK +L TKA +AI GG + +P G+Y T
Sbjct: 40 IVPPTFPDKNYVITDYY---DGKDSLYTKAINQAI---TECSVQGGGKVIIPKGIYPTAP 93
Query: 88 FNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVI 147
L S++ L+LA AV+K T D + L + + G + I+ ++ I
Sbjct: 94 IRLKSNVNLHLADSAVLKFTTD---YNLFDTVRTRLEGID--CYNISPLIYAYEEVNIAI 148
Query: 148 TGENGTIDGQG--AIWWNMWRQR----------------------TLPFT---------- 173
TG NG +DGQ + W+ R R ++PF
Sbjct: 149 TG-NGIMDGQADRSNWFCDERIRGVVQKDGKHTNEKTLLYEMKEDSVPFDKRVFSGKSSI 207
Query: 174 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 233
RP I ++I++ +PFW IHP+ NV IR V + + N DG DP+S
Sbjct: 208 RPQFINLYKCKNILLEGFTINRAPFWLIHPLLSENVTIRKVKM--QSHGYNNDGCDPESC 265
Query: 234 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 293
+NV IED TGDD +A+KSG DE G + PS I +R +G+A+GSE +GG
Sbjct: 266 NNVLIEDCDFDTGDDCIAIKSGRDEDGRFWNIPSENIIVRNCRMKDGHAGVAIGSEVTGG 325
Query: 294 VENVLAEHINLYNVGVG--IHVKTNIGRGGFIRNITVSDVYMENARKGI 340
NV E+ + + + I +K+N RGG + N+ V ++++ ++ I
Sbjct: 326 CRNVWVENCRMDSPELDRIIRIKSNAIRGGEVENLFVRNIFVGECKESI 374
>gi|257889043|ref|ZP_05668696.1| glycoside hydrolase [Enterococcus faecium 1,141,733]
gi|257825106|gb|EEV52029.1| glycoside hydrolase [Enterococcus faecium 1,141,733]
Length = 412
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 140/281 (49%), Gaps = 35/281 (12%)
Query: 76 LYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYM- 134
+++P G+YL G+ L L +GAV+K + +P I R G M
Sbjct: 16 VFIPKGIYLVGALFLKDKSHLIFEEGAVLKGKTEIEAFPEIDT---------RVAGVEMK 66
Query: 135 ---SFIHGDGLQDVVITGENGTIDGQGAIWWNMW---RQRT----------------LPF 172
+ ++ +D++I G+ G IDGQG WW ++ Q++
Sbjct: 67 WPAAILNVLSAKDILIEGK-GIIDGQGEHWWELYWGKDQKSGTRAEYDRKGLRWIADYAI 125
Query: 173 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDS 232
RP ++ ++I ++IFQ S FWN+ Y ++V++ + I+ D P+TDGID DS
Sbjct: 126 KRPRACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKI-IIRHNDGPSTDGIDIDS 184
Query: 233 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSG 292
S++V I + ++ GDD +A+KSG D G SS I I R S + G+ +GSE S
Sbjct: 185 STDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGY-GVTIGSEVSA 243
Query: 293 GVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
GV +V I+ + GI +K++ RGG I NI V ++ M
Sbjct: 244 GVSDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNM 284
>gi|257897638|ref|ZP_05677291.1| glycoside hydrolase [Enterococcus faecium Com12]
gi|257834203|gb|EEV60624.1| glycoside hydrolase [Enterococcus faecium Com12]
Length = 412
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 140/281 (49%), Gaps = 35/281 (12%)
Query: 76 LYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYM- 134
+++P G+YL G+ L L +GAV+K + +P I R G M
Sbjct: 16 VFIPKGIYLVGALFLKDKSHLIFEEGAVLKGKTEIEAFPEIDT---------RVAGVEMK 66
Query: 135 ---SFIHGDGLQDVVITGENGTIDGQGAIWWNMW---RQRT----------------LPF 172
+ ++ +D++I G+ G IDGQG WW ++ Q++
Sbjct: 67 WPAAILNVLSAKDILIEGK-GIIDGQGEHWWELYWGEDQKSGTRAEYDRKGLRWIADYAI 125
Query: 173 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDS 232
RP ++ ++I ++IFQ S FWN+ Y ++V++ + I+ D P+TDGID DS
Sbjct: 126 KRPRACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKI-IIRHNDGPSTDGIDIDS 184
Query: 233 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSG 292
S++V I + ++ GDD +A+KSG D G SS I I R S + G+ +GSE S
Sbjct: 185 STDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGY-GVTIGSEVSA 243
Query: 293 GVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
GV +V I+ + GI +K++ RGG I NI V ++ M
Sbjct: 244 GVSDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNM 284
>gi|392950252|ref|ZP_10315809.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
gi|392434534|gb|EIW12501.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
Length = 438
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/318 (30%), Positives = 152/318 (47%), Gaps = 31/318 (9%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
++++ F GDGK L+TK ++A+ + T L + PG YLTG+ + S+ L
Sbjct: 9 LTLSQFTPHGDGKNLDTKIIQQALNEANKQQ----TGLTIGPGDYLTGALFVPSNSHLQF 64
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
GA + + D ++P I + G P ++ I G +DVVI G G IDG G
Sbjct: 65 EAGARLIGSTDLADYPEIDTRVA-GVEMRWPAA-ILNVIDG---EDVVIEGP-GVIDGNG 118
Query: 159 AIWWNMW-------RQRTL------------PFTRPNLIEFMNSRSIIISNVIFQNSPFW 199
+WW + QR + RP + F ++ IS++ S FW
Sbjct: 119 PVWWERYWGTDQKGGQRKIYDAKNLRWIVDYEVKRPREVLFYRCKNCAISDLTLMRSGFW 178
Query: 200 NIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEY 259
N YC + + ++T+ + P+TDGID DSSS V + + +S GDD + VKSG D
Sbjct: 179 NCQLTYCQQMEVSHLTV-KENNGPSTDGIDIDSSSYVRVHNCELSCGDDCIVVKSGRDGD 237
Query: 260 GIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 319
G+ P++ I I S + G+ +GSE S G+ +V + N G +K++ R
Sbjct: 238 GLRVNQPAAHIEIDHCIIHSGY-GVTLGSEVSAGISDVHIHDMIFENTDCGFRMKSSADR 296
Query: 320 GGFIRNITVSDVYMENAR 337
GG I+N+ + M N +
Sbjct: 297 GGVIKNVVAEHLEMHNVQ 314
>gi|372221526|ref|ZP_09499947.1| glycoside hydrolase family protein [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 487
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 151/308 (49%), Gaps = 25/308 (8%)
Query: 43 DFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGA 102
DFG NTKA + AI SGG ++ PG YL+GS L ++ L+L K
Sbjct: 58 DFGAQSKVGFTNTKAIQTAI---DSCAASGGGIVKFRPGTYLSGSIFLKDNVQLHLDKEV 114
Query: 103 VIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWW 162
+ +Q+ ++ IA + G E P + ++ Q+V+I+GE GTIDGQG ++W
Sbjct: 115 TLLGSQNILDYKEIATRVA-GIEMEWPA----ALVNAIDTQNVLISGE-GTIDGQGKVFW 168
Query: 163 NM-WRQRTLPF-------------TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 208
+M W R + RP + NS+++I+ ++ Q + FW + +Y +
Sbjct: 169 DMYWDMRKNDYEPKGLRWIVDYDAKRPRTVLIQNSKNVIVRDLTLQRAGFWTVQILYSKH 228
Query: 209 VVIRYVTILAP--ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHP 266
V +TI P+TDGID DSSS + +++ I DD +K+G D G+ P
Sbjct: 229 VTTDGLTIRNNIGGHGPSTDGIDIDSSSYILVQNCDIDCNDDNFCLKAGRDWDGLRVNRP 288
Query: 267 SSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNI 326
+ + I+ + VGSETSGG+ ++ A +I G+ +K+ RGG I +I
Sbjct: 289 TEYVVIKDCKTGKGAGLLTVGSETSGGIRHIYANNIQGKGTDAGLKLKSATTRGGVIEDI 348
Query: 327 TVSDVYME 334
++ M+
Sbjct: 349 IFDNMKMD 356
>gi|189463211|ref|ZP_03011996.1| hypothetical protein BACCOP_03924 [Bacteroides coprocola DSM 17136]
gi|189430190|gb|EDU99174.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 431
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 183/414 (44%), Gaps = 53/414 (12%)
Query: 29 IVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSF 88
I P + + ITD+ D +L T A AI + GG + VP G +LT
Sbjct: 8 ISPPTFPDKTYVITDYYNGKD--SLYTDAINRAI---EACSSQGGGTVLVPDGEFLTAPI 62
Query: 89 NLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVIT 148
L S++ L+L+ ++K T D + L + + G + I+ G ++ IT
Sbjct: 63 RLKSNVNLHLSDSTILKFTTD---YNLFETVLTRIEGID--CHNISPLIYAYGENNIAIT 117
Query: 149 GENGTIDGQGAI--WWNMWR-------------QRTLPFT-------------------R 174
G+ G +DGQ + W+ R ++TL + R
Sbjct: 118 GK-GKLDGQASTDNWFAEQRIRGIKAENGETVNEKTLLYQMKADSIPVKERVFEKANGIR 176
Query: 175 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 234
P I ++I++ SPFW IHP+ NV I+ V + + PN DG DP+S
Sbjct: 177 PQFINLYKCKNILLEGFTINRSPFWLIHPLLSENVTIKGVKM--QSHGPNNDGCDPESCE 234
Query: 235 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 294
NV IED TGDD +A+KSG DE G + P I +R +G+A+GSE +GG
Sbjct: 235 NVLIEDCDFDTGDDCIAIKSGRDEDGRYWNIPCKNIIVRECRMKDGHAGVAIGSEITGGC 294
Query: 295 ENVLAEHINLYNVGVG--IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDD 352
NV E+ + + + I +K+N RGG + N+ V ++ + ++ I H D+
Sbjct: 295 HNVWVENCRMDSPELDRIIRIKSNPMRGGNVANVFVRNITVGECKQSILGIEQKYWHVDE 354
Query: 353 KFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN-SPFTGICLSNINLQGVAGP 405
P LP+ I ++++ K Q + G + S I L + + +GV P
Sbjct: 355 --GP-YLPLFENIHLENITSKKSQYVLHLDGFDDKSQIRNIYLKDCSFEGVEKP 405
>gi|257900361|ref|ZP_05680014.1| glycoside hydrolase [Enterococcus faecium Com15]
gi|257838273|gb|EEV63347.1| glycoside hydrolase [Enterococcus faecium Com15]
Length = 412
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 140/281 (49%), Gaps = 35/281 (12%)
Query: 76 LYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYM- 134
+++P G+YL G+ L L +GAV+K + +P I R G M
Sbjct: 16 VFIPKGIYLVGALFLKDKSHLIFEEGAVLKGKTEIEAFPEIDT---------RVAGIEMK 66
Query: 135 ---SFIHGDGLQDVVITGENGTIDGQGAIWWNMW---RQRT----------------LPF 172
+ ++ +D++I G+ G IDGQG WW ++ Q++
Sbjct: 67 WPAAILNVLSAKDILIEGK-GIIDGQGEHWWELYWGKDQKSGTRAEYDRKGLRWIADYAI 125
Query: 173 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDS 232
RP ++ ++I ++IFQ S FWN+ Y ++V++ V I+ D P+TDGID DS
Sbjct: 126 KRPRACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKV-IIRHNDGPSTDGIDIDS 184
Query: 233 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSG 292
S++V I + ++ GDD +A+KSG D G SS I I R S + G+ +GSE S
Sbjct: 185 STDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGY-GVTIGSEVSA 243
Query: 293 GVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
G+ +V I+ + GI +K++ RGG I NI V ++ M
Sbjct: 244 GISDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNM 284
>gi|300715765|ref|YP_003740568.1| Pectin lyase fold domain protein, virulence factor [Erwinia
billingiae Eb661]
gi|299061601|emb|CAX58716.1| Pectin lyase fold domain protein, virulence factor [Erwinia
billingiae Eb661]
Length = 791
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 120/394 (30%), Positives = 175/394 (44%), Gaps = 47/394 (11%)
Query: 43 DFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGA 102
DFGG DGKTLNT A ++AI Q +R GGT+ + PG +L+G L S++TL + +GA
Sbjct: 379 DFGGKADGKTLNTTAIQQAID--QCSQRGGGTV-QLSPGRWLSGPLQLQSNITLQIDQGA 435
Query: 103 VIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWW 162
++A+ + + A + R E +FI+ + +V ITG WW
Sbjct: 436 TLQASNQEGKF-VNAFIGHPARVNE-------AFIYASNVNNVAITGGGTLDGDGEKSWW 487
Query: 163 -NMWRQRT----------------LPFT----RPNLIEFMNSRSIIISNVIFQNSPFWNI 201
+ R +P RP IEF N I + NSP WNI
Sbjct: 488 PQALKIRAEVRGGNPKAFTDRFPGIPLANGAPRPWFIEFNNVSHSKIEQLHLTNSPMWNI 547
Query: 202 HPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 261
+++ ++ V I P SPNTDG+D SS N+ + + I TGDD +A+KSG
Sbjct: 548 VIRNSADITVQNVRITNPVSSPNTDGMDIVSSRNITVSNMDIHTGDDNIAIKSGLVNGTA 607
Query: 262 AYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGG 321
A S ITI GI+VGSET+ G+ V H+ N G+ +K+ RG
Sbjct: 608 A---ASKDITIEDSVMRDGH-GISVGSETANGIGKVTINHVTFLNTENGVRIKSARDRGE 663
Query: 322 FIRNITVSDVYMENARKGIKI----AGDVGDHPDDKFNP-------NALPVVNGITIKDV 370
I + S + M N + + +G G P + P + GI I D+
Sbjct: 664 NIGPLIASHLTMTNVVTPVLVTNSYSGQAGAQGHTLTQPIETAAVTASTPKMKGIHISDL 723
Query: 371 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 404
TK + + GL SP + L+NI + G
Sbjct: 724 MATKASYAMIFSGLPESPVEDVTLNNIRIDAQYG 757
>gi|421725056|ref|ZP_16164257.1| glycoside hydrolase [Klebsiella oxytoca M5al]
gi|410374138|gb|EKP28818.1| glycoside hydrolase [Klebsiella oxytoca M5al]
Length = 460
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 120/413 (29%), Positives = 186/413 (45%), Gaps = 63/413 (15%)
Query: 37 DKI-SITDFGGVGDGK--TLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSH 93
DK+ IT +G G LNT A ++AI +GG + VP G +LT L ++
Sbjct: 33 DKVCDITHYGAEGHRLQIALNTDAIQKAI---DDCAAAGGGTVRVPKGNFLTNPLFLKNN 89
Query: 94 MTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRY-------MSFIHGDGLQDVV 146
+ L L K A + A+ + + RG ++ RY + FI Q+V
Sbjct: 90 IQLKLEKDATLVASTEEAAY----------RGDDKT--RYAEAENGWLPFISIADAQNVA 137
Query: 147 ITGENGTIDGQGAIWWNMWRQRTLPF------TRPNLIEFMNSRSIIISNVIFQNSPFWN 200
I GE GTIDGQGA+WW WR+ RP LI + +++I V +SP ++
Sbjct: 138 IVGE-GTIDGQGAVWWERWRENIRATGKKGGTDRPRLIYITRASNVLIDGVTLTHSPSFH 196
Query: 201 IHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 260
+ Y +V I IL+P +PNTD IDP S N+ I ++YI DD +A+K+ +
Sbjct: 197 VVTRYAHDVDINGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAIKAEKADPR 256
Query: 261 IAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 320
G I I T GI++GSE++GGV NV E+ GI +K+ G+G
Sbjct: 257 FPDG-VVDNIYIANNTLKQ-GRGISIGSESAGGVNNVRVENNTFEGSMYGIRIKSPRGKG 314
Query: 321 GFIRNITVSDVYMENAR--------------------KGIKIAG-DVGDH-------PDD 352
G ++NI + M N K ++ G +G+ P
Sbjct: 315 GEVKNIVYRNTRMHNVEVPLVFSAYYKAAPIVQAEVDKLLQAGGFTLGEQIYPPDSDPKQ 374
Query: 353 KFNPNALPVVNGITIKDVWGT-KVQQSGLIQGLKNSPFTGICLSNINLQGVAG 404
F+ P + IT++++ T + + I G +P +G SN+N++ G
Sbjct: 375 PFDKYKTPHFSNITVENLTSTGDSKAAAYIIGTPEAPLSGFHFSNVNIEADRG 427
>gi|319643150|ref|ZP_07997780.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345520559|ref|ZP_08799946.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|254835079|gb|EET15388.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|317385228|gb|EFV66177.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 1095
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/370 (30%), Positives = 179/370 (48%), Gaps = 27/370 (7%)
Query: 27 SGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTG 86
S ++ + N + +I ++G G+G + T + I H +GG + +P G YL+G
Sbjct: 696 SKLISIGKSNREYNIKEYGVKGNGYS-ETATLQRIINEAAH---NGGGTIVIPAGEYLSG 751
Query: 87 SFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRE-RPGGRYMSFIHGDGLQDV 145
+ + L + K A + +T D +P+I P+ G E R +++F H DG++
Sbjct: 752 ALFFPRGVDLRIEKNAKLISTVDPNEFPVI---PTRFEGIEKRWRCAFLNFDHSDGVK-- 806
Query: 146 VITGENGTIDGQGAIWWNMWRQRTLPFT---RPNLIEFMNSRSIIISNVIFQNSPFWNIH 202
+ GE G IDG+G W + +PF RP L+ F + IS + N W +H
Sbjct: 807 -VYGE-GVIDGKGVEW------KKIPFGNSGRPRLLCFTDCPGGKISGLKMINQASWCLH 858
Query: 203 PVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA 262
+Y + I + I A P++DGID DSS+++ I + I DD +++KSG DE G
Sbjct: 859 VLYTNGFTIDGIDIRALEYIPSSDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRR 918
Query: 263 YGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVG-IHVKTNIGRGG 321
G PS I I + G+A+GSE SGG+ NV + N + K+ RGG
Sbjct: 919 VGRPSENILIENCHFAYGHGGVAMGSEISGGIRNVTIRSCLMDNENWSPLRFKSQPSRGG 978
Query: 322 FIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPV--VNGITIKDVWGTKVQQSG 379
+ NIT D+ ++ AR I + P +P P+ + I K++ G + Q +G
Sbjct: 979 TVENITFEDITIKGARSIFDINMEWRMVP--PLSPAHYPLTCLRNIHFKNING-EAQSAG 1035
Query: 380 LIQGLKNSPF 389
+ G K +PF
Sbjct: 1036 TMYGFKETPF 1045
>gi|160892048|ref|ZP_02073051.1| hypothetical protein BACUNI_04508 [Bacteroides uniformis ATCC 8492]
gi|156858526|gb|EDO51957.1| polygalacturonase (pectinase) [Bacteroides uniformis ATCC 8492]
Length = 471
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 109/358 (30%), Positives = 162/358 (45%), Gaps = 46/358 (12%)
Query: 18 FSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLY 77
F + SV C I P R IT +G GK LNTKA +AI HL GG +
Sbjct: 37 FPMDSVFLC--IFPQR----DFLITKYGAKAGGKKLNTKAIAKAITAC-HL--VGGGRVV 87
Query: 78 VPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFI 137
+P G +LTG +L S++ LY+ +GAV++ T DT + L A + S+ G E Y I
Sbjct: 88 IPKGEWLTGPIHLKSNINLYMEEGAVLRFT-DTPSDYLPAVMTSW-EGME--CYNYSPLI 143
Query: 138 HGDGLQDVVITGENGTIDGQGAIWWNMWRQR------------TLPFT------------ 173
+ +++ ITG+ W +W R T+ T
Sbjct: 144 YASDCENIAITGKGVLAPKMDT--WRIWFARPQAHMEALRKLYTMASTDVPVEERQMAVG 201
Query: 174 ----RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 229
RP+LI R++++ + SPFW IH C ++R + + A+ N DGID
Sbjct: 202 ENNLRPHLIHLNRCRNVLLDGFKIRESPFWTIHLYMCKGGIVRGLDV--KANGHNNDGID 259
Query: 230 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 289
+ S N IE+ GDD V +KSG + G P I +R + + +GSE
Sbjct: 260 LEMSRNFLIENCKFDQGDDAVVIKSGRNRDAWRLGTPCENIVVRNCQVMEGHTLLGIGSE 319
Query: 290 TSGGVENVLAEHINL-YNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV 346
SGGV NV H ++ +V +KTN RGG + NI + DV ++ + + D+
Sbjct: 320 LSGGVRNVYMHHCDVPASVHCLFFIKTNRRRGGIVENIYLEDVTCKDTEYLVGLDMDI 377
>gi|302875124|ref|YP_003843757.1| glycoside hydrolase family protein [Clostridium cellulovorans 743B]
gi|307690250|ref|ZP_07632696.1| glycoside hydrolase family 28 [Clostridium cellulovorans 743B]
gi|302577981|gb|ADL51993.1| glycoside hydrolase family 28 [Clostridium cellulovorans 743B]
Length = 510
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 171/376 (45%), Gaps = 67/376 (17%)
Query: 80 PGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWN--WPLIAPLPSYGRGRERPGGRYMSFI 137
P VY TG+ L S++ L + K A+++ ++ N +PL+ Y R + FI
Sbjct: 118 PNVYYTGAITLKSNVILEIQKNAILRFVRNKTNEFYPLV-----YTRWEGVEMMNFSPFI 172
Query: 138 HGDGLQDVVITGENGTIDGQGAIW-WNMWR-----------QRTLPFT------------ 173
+ +++ I GE G +DG + W W+ QR F
Sbjct: 173 YSYEAENIAIVGE-GVLDGNADEFNWMPWKFGYFKEEDQQIQRERLFELGQKNADVRTER 231
Query: 174 ---------RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 224
RP I+ S++I+I +V NSPFW I+PV C N I+ I + N
Sbjct: 232 IFGDDVSTIRPPFIQPYKSKNILIKDVKIINSPFWEINPVLCEN--IKVDNIKVGTNLYN 289
Query: 225 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 284
DG+DP+S ++ IE+ Y TGDD +A+KSG + G G P+ + IR GI
Sbjct: 290 NDGVDPESCKDMIIENCYFLTGDDCIAIKSGRNNEGRNIGVPTENVIIRYNEFKDGHGGI 349
Query: 285 AVGSETSGGVENVLAEHINLYN---VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 341
+GSE SGGV ++ A H N ++ + I KTN RGG + NI V + + ++ +
Sbjct: 350 TIGSEISGGVNDIFA-HDNYFDSKELDYPIRFKTNAERGGKLENIYVKNSTVNKSKIAVI 408
Query: 342 IA------GDVGDHPDDKFNPNALPVVNGITIKDVWGTK-----VQQSGLIQGLKNSPFT 390
A G GDH P++ IT++++ + + + I+G +++P
Sbjct: 409 HADFFYEEGTNGDHK---------PILRNITLENIKTVEGGSIDAKNALYIKGFEHAPIE 459
Query: 391 GICLSNINLQGVAGPT 406
I + + L GV G
Sbjct: 460 NIVIEDAILNGVNGEA 475
>gi|150004702|ref|YP_001299446.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|149933126|gb|ABR39824.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
Length = 471
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 109/358 (30%), Positives = 162/358 (45%), Gaps = 46/358 (12%)
Query: 18 FSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLY 77
F + SV C I P R IT +G GK LNTKA +AI HL GG +
Sbjct: 37 FPMDSVFLC--IFPQR----DFLITKYGAKAGGKKLNTKAIAKAITAC-HL--VGGGRVV 87
Query: 78 VPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFI 137
+P G +LTG +L S++ LY+ +GAV++ T DT + L A + S+ G E Y I
Sbjct: 88 IPKGEWLTGPIHLKSNINLYMEEGAVLRFT-DTPSDYLPAVMTSW-EGME--CYNYSPLI 143
Query: 138 HGDGLQDVVITGENGTIDGQGAIWWNMWRQR------------TLPFT------------ 173
+ +++ ITG+ W +W R T+ T
Sbjct: 144 YASDCENIAITGKGVLAPKMDT--WRIWFARPQAHMEALRKLYTMASTDVPVEERQMAVG 201
Query: 174 ----RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 229
RP+LI R++++ + SPFW IH C ++R + + A+ N DGID
Sbjct: 202 ENNLRPHLIHLNRCRNVLLDGFKIRESPFWTIHLYMCKGGIVRGLDV--KANGHNNDGID 259
Query: 230 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 289
+ S N IE+ GDD V +KSG + G P I +R + + +GSE
Sbjct: 260 LEMSRNFLIENCKFDQGDDAVVIKSGRNRDAWRLGTPCENIVVRNCQVMEGHTLLGIGSE 319
Query: 290 TSGGVENVLAEHINL-YNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV 346
SGGV NV H ++ +V +KTN RGG + NI + DV ++ + + D+
Sbjct: 320 LSGGVRNVYMHHCDVPASVHCLFFIKTNRRRGGIVENIYLEDVTCKDTEYLVGLDMDI 377
>gi|197105923|ref|YP_002131300.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
gi|196479343|gb|ACG78871.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
Length = 468
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 155/319 (48%), Gaps = 40/319 (12%)
Query: 44 FGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLT-GSFNLTSHMTLYLAKGA 102
FGG DG++ A ++AI R+GG + + PGV+ + G L SH+ L + GA
Sbjct: 63 FGGRADGRSDARPAIQKAI---DAAHRAGGGRVTLSPGVWFSRGPVRLKSHVELRVEAGA 119
Query: 103 VIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWW 162
+ + + ++ + P+ + G E Y FI+ G++DV ITG G IDG +
Sbjct: 120 TLLFSPEPDDY--LPPVKTRWEGTEVY--TYSPFIYAAGVEDVAITG-GGVIDGNAQSRF 174
Query: 163 NMW---------RQRTLPFT---------------RPNLIEFMNSRSIIISNVIFQNSPF 198
+ W R R + F RP LI+ + + + +NSPF
Sbjct: 175 HAWHNLAEPDFQRLRRMGFEGVPVAQRRFGKGTHLRPPLIQVFGGKRVRLEGFTARNSPF 234
Query: 199 WNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDE 258
W H VY VV+R +T+ + PN DG+D +SS+ V IE+S TGDD V +KSG D
Sbjct: 235 WVNHLVYADEVVVRGITV--DSHFPNNDGVDVESSTRVLIENSRFRTGDDSVVIKSGRDL 292
Query: 259 YGIAYGHPSSGITIR--RVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTN 316
G G PS+ + +R + G GIA+GSE SGGV +V L I K N
Sbjct: 293 DGRRIGRPSAWVLVRGNDMGGE---DGIALGSEMSGGVHDVFFTDNVLRKGLSAIRFKAN 349
Query: 317 IGRGGFIRNITVSDVYMEN 335
+ RGG + + V ++ +E+
Sbjct: 350 LDRGGTVERVRVRNMTVED 368
>gi|150002783|ref|YP_001297527.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|294777287|ref|ZP_06742742.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|149931207|gb|ABR37905.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
gi|294448907|gb|EFG17452.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 1095
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 111/370 (30%), Positives = 179/370 (48%), Gaps = 27/370 (7%)
Query: 27 SGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTG 86
S ++ + N + +I ++G G+G + T + I H +GG + +P G YL+G
Sbjct: 696 SKLISIGKNNREYNIKEYGVKGNGYS-ETATLQRIINEAVH---NGGGTIVIPAGEYLSG 751
Query: 87 SFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRE-RPGGRYMSFIHGDGLQDV 145
+ + L + K A + +T D +P+I P+ G E R +++F H DG++
Sbjct: 752 ALFFPRGVDLRIEKNAKLISTVDPNEFPVI---PTRFEGIEKRWRCAFLNFDHSDGVK-- 806
Query: 146 VITGENGTIDGQGAIWWNMWRQRTLPFT---RPNLIEFMNSRSIIISNVIFQNSPFWNIH 202
+ GE G IDG+G W + +PF RP L+ F + IS + N W +H
Sbjct: 807 -VYGE-GVIDGKGVEW------KKIPFGNSGRPRLLCFTDCPGGKISGLKMINQASWCLH 858
Query: 203 PVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA 262
+Y + I + I A P++DGID DSS+++ I + I DD +++KSG DE G
Sbjct: 859 VLYTNGFTIDGIDIRALEYIPSSDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRR 918
Query: 263 YGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVG-IHVKTNIGRGG 321
G PS I I + G+A+GSE SGG+ NV + N + K+ RGG
Sbjct: 919 VGRPSENILIENCHFAYGHGGVAMGSEISGGIRNVTIRSCLMDNENWSPLRFKSQPSRGG 978
Query: 322 FIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPV--VNGITIKDVWGTKVQQSG 379
+ NIT D+ ++ AR I + P +P P+ + I K++ G + Q +G
Sbjct: 979 TVENITFEDITIKGARSIFDINMEWRMVP--PLSPAHYPLTCLRNIHFKNING-EAQSAG 1035
Query: 380 LIQGLKNSPF 389
+ G K +PF
Sbjct: 1036 TMYGFKEAPF 1045
>gi|225872229|ref|YP_002753684.1| glycosyl hydrolase, family 28 [Acidobacterium capsulatum ATCC
51196]
gi|225792218|gb|ACO32308.1| glycosyl hydrolase, family 28 [Acidobacterium capsulatum ATCC
51196]
Length = 468
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 123/461 (26%), Positives = 194/461 (42%), Gaps = 83/461 (18%)
Query: 28 GIVPMRYRNDKISI--TDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLT 85
GI PM ++I +G GDG TL+T R + + G + PG Y T
Sbjct: 17 GIQPMAAHAKMLAIRANAYGAKGDGITLDT---RAIQAALDAAAKKGPATVTFAPGTYRT 73
Query: 86 GSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSF----IHGDG 141
G+ + S TL + G ++A N+PLI + R G M + I+
Sbjct: 74 GALFVKSGTTLRIGAGVTLRAVHGLANYPLI---------KTRVAGIDMHWPAAVINVYR 124
Query: 142 LQDVVITGENGTIDGQGAIWWN-------MWRQRTLPFT------RPNLIEFMNSRSIII 188
DV ITG +GT+DG G WW+ + R L + RP LIEF S+ + +
Sbjct: 125 QHDVHITG-SGTVDGNGKYWWDGYWALRKQYDLRGLRWAADYDDRRPRLIEFYQSQHVSL 183
Query: 189 SNVIFQNSPFWNIHPVYCSNVVIRYVTIL--APADSPNTDGIDPDSSSNVCIEDSYISTG 246
+ + SPFW +H Y + V + +TI P+TDG+D DSS +V +E + IS
Sbjct: 184 AGLHLLRSPFWTVHICYSAYVHVDGITIRNNIGGRGPSTDGVDIDSSRHVLVEHADISVN 243
Query: 247 DDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHIN-LY 305
DD + +K+G D G+ P I IR T + +GSETSGG NV +I+ L
Sbjct: 244 DDALCLKAGRDSDGLRVNKPDVDIVIRNCTVRYGAAAFTIGSETSGGFRNVDVYNIHALE 303
Query: 306 NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPN-------- 357
+V G+ K+ RGG+ NI + D ++ I I + +NP+
Sbjct: 304 HVPSGVLFKSAHTRGGWADNIRIHDFQLDGVAIPIHITMN--------WNPSYSYAKIPH 355
Query: 358 --------------------ALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNI 397
LP + I ++ T +++ + + +P L +I
Sbjct: 356 GLKHVPRYYRVLAKPVPPARGLPHFRNVHIWNIEATNAKRAFDVSAMPAAPLVRFKLDHI 415
Query: 398 NLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGA 438
+Q + +GS V+ W S ++ + G+
Sbjct: 416 RIQ------------AQSAGSIAAVRDWTLSHVTVQTKDGS 444
>gi|315570532|gb|ADU33270.1| glycoside hydrolase family protein 28 [Callosobruchus maculatus]
Length = 394
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 175/369 (47%), Gaps = 22/369 (5%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
+T +G G+ T A AI + GG L++ P G YLTG L S+M + +
Sbjct: 20 DVTRYGADRTGRVPCTDAIARAI---KDAEIHGGGLIHFPSGRYLTGPIELKSNMVMDVG 76
Query: 100 KGAVIKATQDTWNWP-LIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
G +I D +P L LP G+ R P + I G ++V I G DG+G
Sbjct: 77 TGTIITFLDDPALYPPLDVTLPD-GQRRSVP---FTPLIRAWGQKNVGIRGNKVIFDGRG 132
Query: 159 AIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILA 218
IWW+ + P TRP + F + ++++ ++SP +N++ ++ S +VI V I
Sbjct: 133 EIWWD---RLPPPATRPIFVNFFDCHNVVLKGFTIKSSPMFNVNILHSSGIVIDGVRIRN 189
Query: 219 PAD----SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
P PNTDGI+ S V I ++TGDD V V + W + P+ + I
Sbjct: 190 PESYHGRGPNTDGINLVSVRKVHITGVDVATGDDCV-VFNAWGY--LKERVPTEDVLIEN 246
Query: 275 VTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYME 334
S I++GS T+GG+ N+ + + G+ +KTN RGG I NI ++ M
Sbjct: 247 SYMSVGHGAISIGSVTAGGLRNITVRNCVIDGTTRGLDIKTNRQRGGTIENINYYNITMN 306
Query: 335 NAR-KGIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTG 391
R +GI + D+ + D + P + P + I ++ G+ + L+QGL +P
Sbjct: 307 RVRWEGIALI-DLFNDNDPSWKPIGDQTPFIRNIRFDNIRGSCDRNPILVQGLPEAPIEN 365
Query: 392 ICLSNINLQ 400
I +SN +++
Sbjct: 366 IEISNTDIR 374
>gi|423315483|ref|ZP_17293411.1| hypothetical protein HMPREF1058_04023 [Bacteroides vulgatus
CL09T03C04]
gi|392679286|gb|EIY72672.1| hypothetical protein HMPREF1058_04023 [Bacteroides vulgatus
CL09T03C04]
Length = 1095
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 111/370 (30%), Positives = 178/370 (48%), Gaps = 27/370 (7%)
Query: 27 SGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTG 86
S + + N + +I ++G G+G + T + I H +GG + +P G YL+G
Sbjct: 696 SKFISIGKNNREYNIKEYGVKGNGYS-ETATLQRIINEAAH---NGGGTIVIPAGEYLSG 751
Query: 87 SFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRE-RPGGRYMSFIHGDGLQDV 145
+ + L + K A + +T D +P+I P+ G E R +++F H DG++
Sbjct: 752 ALFFPRGVDLRIEKNAKLISTVDPNEFPVI---PTRFEGIEKRWRCAFLNFDHSDGVK-- 806
Query: 146 VITGENGTIDGQGAIWWNMWRQRTLPFT---RPNLIEFMNSRSIIISNVIFQNSPFWNIH 202
+ GE G IDG+G W + +PF RP L+ F + IS + N W +H
Sbjct: 807 -VYGE-GVIDGKGVEW------KKIPFGNSGRPRLLCFTDCPGGKISGLKMINQASWCLH 858
Query: 203 PVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA 262
+Y + I + I A P++DGID DSS+++ I + I DD +++KSG DE G
Sbjct: 859 VLYTNGFTIDGIDIRALEYIPSSDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRR 918
Query: 263 YGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVG-IHVKTNIGRGG 321
G PS I I + G+A+GSE SGG+ NV + N + K+ RGG
Sbjct: 919 VGRPSENILIENCHFAYGHGGVAMGSEISGGIRNVTIRSCLMDNENWSPLRFKSQPSRGG 978
Query: 322 FIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPV--VNGITIKDVWGTKVQQSG 379
+ NIT D+ ++ AR I + P +P P+ + I K++ G + Q +G
Sbjct: 979 TVENITFEDITIKGARSIFDINMEWRMVP--PLSPAHYPLTSLRNIHFKNING-EAQSAG 1035
Query: 380 LIQGLKNSPF 389
+ G K +PF
Sbjct: 1036 TMYGFKEAPF 1045
>gi|413920258|gb|AFW60190.1| hypothetical protein ZEAMMB73_155387 [Zea mays]
Length = 163
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 91/140 (65%)
Query: 291 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 350
SGG+ ++ H+ +++ GI KT+ GRGG+I ++ +S+V MEN GI+ G+ HP
Sbjct: 2 SGGISDIHVNHLRIHDSSKGISFKTSPGRGGYIEDVVISEVQMENVHVGIEFTGNCSTHP 61
Query: 351 DDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPL 410
DD F+P+ LP ++ +T+K++ GT + +G++ G++ +PFT ICLSN+N AG
Sbjct: 62 DDSFDPSDLPAIDHVTMKNMAGTNISVAGVLSGIEGAPFTAICLSNLNFSMAAGSGPSSW 121
Query: 411 KCSDVSGSAYQVKPWPCSEL 430
CSDVSG + V P PC+EL
Sbjct: 122 SCSDVSGYSEAVFPEPCTEL 141
>gi|356553680|ref|XP_003545181.1| PREDICTED: probable polygalacturonase At3g15720-like [Glycine max]
Length = 402
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 123/434 (28%), Positives = 197/434 (45%), Gaps = 64/434 (14%)
Query: 8 LSILLSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQH 67
+ +L++ F L S +CS I ++ D+G +GDG T +++AF +A + +
Sbjct: 1 MEVLIAIFFVLYLVSHCSCSRIREAAINLYTFNVMDYGAIGDGLTDDSQAFLKA-WSMVC 59
Query: 68 LRRSGGTLLYVPPG-------VYLTGSFNLTS-HMTLYLAKGAVIKATQDTWNWPLIAPL 119
++G L VPPG + +G + +S H L +G V+ A + T W
Sbjct: 60 AMKNGAATLKVPPGKTFMLKPLQFSGPCSFSSVHFQL---EGDVV-APKSTEAW------ 109
Query: 120 PSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIE 179
+ + +++ F + DGL +I G G IDG G++WWN + ++ +RP +
Sbjct: 110 ------KGQDSSKWIDFSNVDGL---IIDG-GGQIDGSGSVWWNSCKVKSC--SRPTALS 157
Query: 180 FMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIE 239
N ++ ++ NS +I ++ I VTI AP DSPNTDGID SS + I+
Sbjct: 158 IQNCNNLQLTGTRHLNSARNHISINNSNHTHIFNVTITAPQDSPNTDGIDVSQSSYILIQ 217
Query: 240 DSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG----VE 295
S I+TGDD +A+KSG I +GIT P GI+VGS G VE
Sbjct: 218 RSTIATGDDCIAMKSGTSYVNI------TGITC------GPGHGISVGSLGKKGTCQTVE 265
Query: 296 NVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFN 355
+V + N G+ +KT G G+ RNI + + N + I I D + ++
Sbjct: 266 HVHVNNCNFKGADNGMRIKTWPGGCGYARNIKFEHILLTNTKNPIIIDQDYENVQNEDKK 325
Query: 356 PNALPVVNGITIKDVWGTKVQQSGLIQGL-----------------KNSPFTGICLSNIN 398
+ ++G+T + V GT ++ +I S + + S N
Sbjct: 326 QTSEVQISGVTYRCVNGTSNSETAIILNCGAGAGCTDIFMDVVNITSTSSGSNVHASCNN 385
Query: 399 LQGVAGPTSPPLKC 412
GVA TSPP+ C
Sbjct: 386 AHGVAASTSPPVSC 399
>gi|390959335|ref|YP_006423092.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
gi|390414253|gb|AFL89757.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
Length = 468
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 156/320 (48%), Gaps = 26/320 (8%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
++ +FG GDG +TKA ++A+ + + + PG Y GS + S L L
Sbjct: 20 LTANNFGAKGDGVADDTKAIQKALDAAAGKHDT----VTLKPGTYRIGSIFVKSGSRLDL 75
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
KG ++ Q +PL +P+ G E + ++ DV ITGE GTIDG G
Sbjct: 76 PKGVTLRGIQSLDAYPL---MPTRIAGIEMTWPAALVNVYKQ--TDVQITGE-GTIDGDG 129
Query: 159 AIWWNMW---RQRTLP----------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVY 205
+ WW + R + P RP LI+ +S ++ + + S FW +H Y
Sbjct: 130 SYWWKSYWDLRAKYEPKGLRWASDYDAKRPRLIQVFDSSNVKLDGPMLTRSGFWTVHICY 189
Query: 206 CSNVVIRYVTIL--APADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAY 263
+V I +VTI P+TDGID DSS +V ++ + I DD + +K+G D G+
Sbjct: 190 SHDVTIDHVTIRNNEGGKGPSTDGIDIDSSHDVLVQHADIDVNDDALCLKAGRDSDGLRV 249
Query: 264 GHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHIN-LYNVGVGIHVKTNIGRGGF 322
P+ + +R + + + GSETSGG N+ A ++ L V G+ +K+ RGGF
Sbjct: 250 NRPTYNVVLRDSLIRTGAAAVTFGSETSGGFRNIEAYNLTALRGVTNGVLIKSAKVRGGF 309
Query: 323 IRNITVSDVYMENARKGIKI 342
N+ V D++++ + IK+
Sbjct: 310 GENLRVHDLHLDGVKTPIKV 329
>gi|238024144|ref|YP_002908376.1| glycoside hydrolase [Burkholderia glumae BGR1]
gi|237878809|gb|ACR31141.1| Glycoside hydrolase [Burkholderia glumae BGR1]
Length = 673
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 107/183 (58%), Gaps = 20/183 (10%)
Query: 172 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 231
F RP ++EF+ ++++ N QN+PFW HP C+NVVIR V +A + PN DG DPD
Sbjct: 341 FLRPCMVEFIGCTNVLMENYHTQNTPFWQHHPTDCTNVVIRGV--MADSIGPNNDGFDPD 398
Query: 232 SSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 288
+ +NV + +TGDD +A+KSG D EYG A H ++ T +S GI +GS
Sbjct: 399 ACNNVLCDGMVFNTGDDCIAIKSGKDLDTEYGAAQNH-----VVQNCTMNSGHGGITLGS 453
Query: 289 ETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 341
E GG+ENV A ++ + N + + I +KTN+ RGGF+RN V+ V + N G+
Sbjct: 454 EMGGGIENVYARNLTMLNQFWATNSLNIAIRIKTNMNRGGFVRNFYVNGVTLPN---GVS 510
Query: 342 IAG 344
+ G
Sbjct: 511 LTG 513
>gi|414864495|tpg|DAA43052.1| TPA: hypothetical protein ZEAMMB73_419161 [Zea mays]
Length = 216
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/115 (57%), Positives = 79/115 (68%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R +T++G VGDG+TLNT AF A+ + GG L VPPG +LTG FNLTS
Sbjct: 41 RKHVARVTEYGAVGDGRTLNTAAFARAVADLARRAPDGGAALVVPPGKWLTGPFNLTSCF 100
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITG 149
TLYL +GA I A+QD +WPLIAPLPSYGRGR+ PG RY +FI G L DV+ITG
Sbjct: 101 TLYLDEGAEILASQDMKHWPLIAPLPSYGRGRDEPGPRYSNFIGGSNLTDVIITG 155
>gi|431753628|ref|ZP_19542297.1| glycosyl hydrolase [Enterococcus faecium E2620]
gi|430611661|gb|ELB48738.1| glycosyl hydrolase [Enterococcus faecium E2620]
Length = 436
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 139/281 (49%), Gaps = 35/281 (12%)
Query: 76 LYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYM- 134
+++P G+YL G+ L L +GAV+K + +P I R G M
Sbjct: 40 VFIPEGIYLVGALFLKDKSHLIFEEGAVLKGKTEIEAFPEIDT---------RVAGVEMK 90
Query: 135 ---SFIHGDGLQDVVITGENGTIDGQGAIWWNMW---RQRT----------------LPF 172
+ ++ + ++I G+ G IDGQG WW ++ Q++
Sbjct: 91 WPAAILNVLSAKHILIEGK-GIIDGQGEHWWELYWGKDQKSGTRAEYDRKGLCWIADYAI 149
Query: 173 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDS 232
RP ++ ++I ++IFQ S FWN+ Y ++V++ + I+ D P+TDGID DS
Sbjct: 150 KRPRACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKI-IIRHNDGPSTDGIDIDS 208
Query: 233 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSG 292
S++V I + ++ GDD +A+KSG D G SS I I R S + G+ +GSE S
Sbjct: 209 STDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGY-GVTIGSEVSA 267
Query: 293 GVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
GV +V I+ + GI +K++ RGG I NI V ++ M
Sbjct: 268 GVSDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNM 308
>gi|315570520|gb|ADU33264.1| glycoside hydrolase family protein 28 [Callosobruchus maculatus]
Length = 407
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 176/378 (46%), Gaps = 24/378 (6%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
++TDFG GK +T A +AI + GG + + G YL+G F L S++TL
Sbjct: 24 NVTDFGADSTGKNASTTAITKAIDKAS--EDYGGVVRFTK-GQYLSGPFELKSNITLQFD 80
Query: 100 KGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGA 159
V+K D +P + L G P Y I +++VVI G+ +DG GA
Sbjct: 81 DDVVLKFLDDPKEYPPLTKLLPNGLTFSLP---YTPLIRAFIVRNVVIRGK-AILDGNGA 136
Query: 160 IWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP 219
WW ++ P RP + F S +I + +V +NSP +NI +Y +V+++ ++I P
Sbjct: 137 PWW---KRLPPPNARPQFLFFYQSYNITVEDVAIRNSPMYNIQLIYTDHVLLKGISIKNP 193
Query: 220 AD----SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRV 275
PNTDGI+ + + + + + TGDD VA+ + + + P+ I I
Sbjct: 194 PSYVDPGPNTDGINCNPCRYLHVTNVTVDTGDDCVALDADLGDKLMGRW-PTEHILIENS 252
Query: 276 TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 335
+ +++GS T+ G+ N+ + G+++KT GRGG + +I ++ M N
Sbjct: 253 HMFAGHGAVSIGSATTAGLRNITVRNCIFNGTDRGLYIKTRRGRGGLVEDIHYHNITMLN 312
Query: 336 ARK-GIKIAG-----DVGDHPDD-KFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKN 386
RK G+ IA D G H + + P + P + I + + G +S I GL
Sbjct: 313 IRKEGVAIAAVYNGTDEGMHERNIHWVPIDDTTPFIRNIRYRGIRGNSKLESLFIVGLPE 372
Query: 387 SPFTGICLSNINLQGVAG 404
+ L + ++Q G
Sbjct: 373 RQVLDVILDDFHVQSEKG 390
>gi|160886940|ref|ZP_02067943.1| hypothetical protein BACOVA_04954 [Bacteroides ovatus ATCC 8483]
gi|237721224|ref|ZP_04551705.1| pectate lyase [Bacteroides sp. 2_2_4]
gi|423288954|ref|ZP_17267805.1| hypothetical protein HMPREF1069_02848 [Bacteroides ovatus
CL02T12C04]
gi|423294898|ref|ZP_17273025.1| hypothetical protein HMPREF1070_01690 [Bacteroides ovatus
CL03T12C18]
gi|156107351|gb|EDO09096.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|229449020|gb|EEO54811.1| pectate lyase [Bacteroides sp. 2_2_4]
gi|392668718|gb|EIY62212.1| hypothetical protein HMPREF1069_02848 [Bacteroides ovatus
CL02T12C04]
gi|392676089|gb|EIY69530.1| hypothetical protein HMPREF1070_01690 [Bacteroides ovatus
CL03T12C18]
Length = 461
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 157/342 (45%), Gaps = 40/342 (11%)
Query: 34 YRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSH 93
Y + ITDFG V G+ NTKA AI + +SGG + VP G +LTG + S+
Sbjct: 48 YPDKDFIITDFGAVNGGRVDNTKAITSAI---EACNQSGGGRVVVPAGTWLTGPIHFKSN 104
Query: 94 MTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGT 153
+ LYL + AV+ T + ++ L A + S+ G E Y ++ ++V ITG+ GT
Sbjct: 105 VNLYLEENAVLNFTDNPSDY-LPAVMTSW-EGLE--CYNYSPLLYAFECENVAITGK-GT 159
Query: 154 IDGQGAIWWNMWRQRTLPFT----------------------------RPNLIEFMNSRS 185
+ + W +W +R P RP+LI F ++
Sbjct: 160 LQPKMDTW-KVWFKRPQPHLEALKELYTKASTNIPVIERQMAIGENHLRPHLIHFNRCKN 218
Query: 186 IIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYIST 245
+++ + SPFW IH C ++R + + A N DGID + S N +ED
Sbjct: 219 VLLDGFKIRESPFWTIHLYMCDGGLVRNLDV--KAHGHNNDGIDFEMSRNFLVEDCSFDQ 276
Query: 246 GDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLY 305
GDD V +K+G ++ P I IR + + +GSE SGG+ N+
Sbjct: 277 GDDAVVIKAGRNQDAWRLNTPCENIVIRNCQILKGHTLLGIGSEISGGIRNIYMHDCTAP 336
Query: 306 N-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV 346
N V VKTN RGGFI N+ + +V A++ ++I +V
Sbjct: 337 NSVMRLFFVKTNHRRGGFIENVYMKNVKAGTAQRVLEIDTEV 378
>gi|315570526|gb|ADU33267.1| glycoside hydrolase family protein 28 [Callosobruchus maculatus]
Length = 404
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 175/378 (46%), Gaps = 36/378 (9%)
Query: 41 ITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAK 100
+ FG G+ +T A ++AI + +GGT+ + P G YL+G+ L S++ L A
Sbjct: 23 VNKFGADSTGRKPSTHAIQKAINKAA--SNNGGTV-HFPHGQYLSGAIELKSNIILDFAD 79
Query: 101 GAVIKATQDTWNWPLIAPLPSYGRGRERPGGR-----YMSFIHGDGLQDVVITGENGTID 155
V+K D +P PL ++ P G+ + I ++ I G N +D
Sbjct: 80 DVVLKFLDDPKEYP---PL-----HKKLPNGKIVNLQFTPLIRAFDHINITIRG-NAVLD 130
Query: 156 GQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVT 215
G G WW ++ P TRP ++ R + + N+ ++SP +N++ C +V IR +
Sbjct: 131 GHGETWW---KRMPPPSTRPVFLQIFWVRYLTLENITVKSSPMFNVNLKNCDDVTIRGIK 187
Query: 216 ILAPAD----SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGIT 271
I PA+ PNTDGI+ +S V I ISTGDD +A+ + P+ +
Sbjct: 188 IRNPANYVDPGPNTDGINVNSCRRVHITGVNISTGDDCIALDANGKG---KTKTPTEDVL 244
Query: 272 IRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDV 331
I + G+++GS TSGG+ NV + G+ +K+ GRGG + +I ++
Sbjct: 245 IEDSHMYAGHGGVSIGSVTSGGLRNVTVRNCIFNGTNRGLFIKSRRGRGGLVEDIHYHNI 304
Query: 332 YMENARK-GIKIAG-----DVGDHPDDKF-NP--NALPVVNGITIKDVWGTKVQQSGLIQ 382
M + RK GI IA D G D + P P + + K++ G V I
Sbjct: 305 QMVDLRKEGIAIAAIYNGSDPGLRSRDFYWEPVNETTPFIRNVEFKNIHGDSVLNPIFIV 364
Query: 383 GLKNSPFTGICLSNINLQ 400
GL SP + +N+ ++
Sbjct: 365 GLPESPIENVTFTNVKIE 382
>gi|330996084|ref|ZP_08319977.1| polygalacturonase [Paraprevotella xylaniphila YIT 11841]
gi|329573855|gb|EGG55436.1| polygalacturonase [Paraprevotella xylaniphila YIT 11841]
Length = 466
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 102/343 (29%), Positives = 156/343 (45%), Gaps = 46/343 (13%)
Query: 18 FSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLY 77
F + SV C + P + IT +G GK LNTKA A+ R+GG +
Sbjct: 38 FPMDSVYLC--VFPQK----DFPITRYGAKEGGKVLNTKAIARAV---DACHRAGGGRVV 88
Query: 78 VPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFI 137
VP G +LTG +L S++ L+L KGAV+ T ++ L A + S+ G E Y +
Sbjct: 89 VPAGEWLTGPVHLKSNVNLHLEKGAVLSFTDTPLDY-LPAVMTSW-EGME--CYNYSPLV 144
Query: 138 HGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFT------------------------ 173
+ +++ ITG +GT+ + W W R
Sbjct: 145 YAYDCENIAITG-SGTLAPRMETW-KKWFARPQAHMDALKKLYEMASTDIAVEKRQMAEG 202
Query: 174 ----RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 229
RP+LI R++++ + + SPFW IH C ++R + + A+ N DGID
Sbjct: 203 ENNLRPHLIHLNRCRNVLLEDFSIRESPFWTIHLYMCKGGIVRRLDV--KANGHNNDGID 260
Query: 230 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 289
+ S + IE+ GDD V +KSG + PS I IR + + + +GSE
Sbjct: 261 LEMSRDFLIENCTFDQGDDAVVIKSGRNRDAWRLDTPSENIVIRNCKILAGHTLLGIGSE 320
Query: 290 TSGGVENVLAEHIN-LYNVGVGIHVKTNIGRGGFIRNITVSDV 331
SGG+ N+ H + L +V +KTN RGGF+ NI + D+
Sbjct: 321 LSGGIRNIFMHHCDVLGSVRCLFFIKTNCRRGGFVENIHLEDI 363
>gi|189464040|ref|ZP_03012825.1| hypothetical protein BACINT_00375 [Bacteroides intestinalis DSM
17393]
gi|189438613|gb|EDV07598.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 532
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 115/385 (29%), Positives = 173/385 (44%), Gaps = 40/385 (10%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+S FG V D L+T A ++AI SGG + + PG YLTG+ + S + L +
Sbjct: 84 VSANSFGAVADSTVLSTDAIQKAI---DSCALSGGGTVTLQPGYYLTGALFVKSGVNLQI 140
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYM----SFIHGDGLQDVVITGENGTI 154
+KG + A D +P R R G M + I+ G + ++GE GT+
Sbjct: 141 SKGVTLIACSDIHCYPEF---------RSRIAGIEMVWPAAVINIIGEEKASVSGE-GTL 190
Query: 155 DGQGAIWWNM-WRQRT------------LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 201
D +G I+W+ W R R I NS + +SN + FW
Sbjct: 191 DCRGKIFWDKYWAMRKEYEAKGLRWIVDYDCKRVRGILVENSSDVTLSNFTLMRTGFWGC 250
Query: 202 HPVYCSNVVIRYVTILAP--ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEY 259
+Y + + + I P+TDGID DSS+N+ IE+ I DD + +K+G D
Sbjct: 251 QILYSDHCTVDGLIINNNIGGRGPSTDGIDIDSSTNILIENCEIDCNDDNICLKAGRDAD 310
Query: 260 GIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 319
G+ P+ I IR T I GSETSGG+ NVLA + + + +K+ + R
Sbjct: 311 GLRVNRPTENIVIRNCTVHKGGGLITCGSETSGGIRNVLAHDLKAFGTSNVLQLKSAMTR 370
Query: 320 GGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPV-VNGITIKDVWGTKVQQS 378
GG I NI ++ V +N R+ D +P K++ + LP G + + W KV +
Sbjct: 371 GGVIENIYITRVEAKNVRR--IFGADPNWNP--KYSYSTLPENYKGKELPEHW--KVMLT 424
Query: 379 GLIQGLKNSP-FTGICLSNINLQGV 402
+I K P F I LS + V
Sbjct: 425 PVIPSEKGFPHFRNIYLSQVKATNV 449
>gi|393781473|ref|ZP_10369668.1| hypothetical protein HMPREF1071_00536 [Bacteroides salyersiae
CL02T12C01]
gi|392676536|gb|EIY69968.1| hypothetical protein HMPREF1071_00536 [Bacteroides salyersiae
CL02T12C01]
Length = 537
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 143/343 (41%), Gaps = 68/343 (19%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
+++I +G DGK LNT+A AI + + GG + +P G++LTG L S++ LY
Sbjct: 56 EVNIVAYGAKNDGKFLNTEAINNAI---KAVNAKGGGKVIIPEGLWLTGPIVLLSNVNLY 112
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITG-------- 149
+ A+I T D +P+I S+ R R S I +++ ITG
Sbjct: 113 TERNALILFTDDFEAYPIINT--SFEGLETR---RCQSPISARNAENIAITGYGTFDGAG 167
Query: 150 ---------------------ENGTIDGQGAIW--------------------------- 161
G D G IW
Sbjct: 168 DSWRPVKKDKLTASQWGKLVKSGGVTDSAGKIWYPTAGALKGALACKDFNVPEGINTDEE 227
Query: 162 WNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 221
WN R P+ RP L+ + S+ +++ V F+NSP W +HP+ C ++ + V + P
Sbjct: 228 WNEIR----PWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITVNNVKVFNPWY 283
Query: 222 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 281
S N D +D +S N I +S GDD + +KSG D G G P + ++
Sbjct: 284 SQNGDALDLESCKNALIINSLFDAGDDAICIKSGKDADGRRRGEPCQNVLVKNNIVLHGH 343
Query: 282 SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 324
G VGSE SGGV+N+ VG+ K+ GRGG +
Sbjct: 344 GGFVVGSEMSGGVKNIYVTDCTFMGTDVGLRFKSTRGRGGVVE 386
>gi|295086705|emb|CBK68228.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
Length = 460
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 158/342 (46%), Gaps = 40/342 (11%)
Query: 34 YRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSH 93
Y + ITD+G G+ NTKA AI + +SGG + VP G++LTG + S+
Sbjct: 47 YPDKDFLITDYGAKNGGEVNNTKAIAAAI---EACHKSGGGRVVVPAGIWLTGPIHFKSN 103
Query: 94 MTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGT 153
+ LYL + A++ T + ++ L A + S+ G E Y ++ ++V ITG+ GT
Sbjct: 104 VNLYLEENAILNFTDNPSDY-LPAVMTSW-EGLE--CYNYSPLLYAFECENVAITGK-GT 158
Query: 154 IDGQGAIWWNMWRQRTLPFT----------------------------RPNLIEFMNSRS 185
+ + W +W +R P RP+LI F ++
Sbjct: 159 LQPKMDTW-KVWFKRPQPHLEALKELYTKASTDVPVIERQMAVGENHLRPHLIHFNRCKN 217
Query: 186 IIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYIST 245
+++ + SPFW IH C ++R + + A D N DGID + S N +ED
Sbjct: 218 VLLDGFKIRESPFWTIHLYMCDGGLVRNLDVKAHGD--NNDGIDFEMSRNFLVEDCSFDQ 275
Query: 246 GDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLY 305
GDD V +K+G ++ P I IR + + +GSE SGG+ N+
Sbjct: 276 GDDAVVIKAGRNQDAWRLNTPCENIVIRNCQILKGHTLLGIGSEISGGIRNIYMHDCTAP 335
Query: 306 N-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV 346
N V VKTN RGGFI N+ + +V A++ ++I +V
Sbjct: 336 NSVMRLFFVKTNHRRGGFIENVYMKNVQAGTAQRVLEIDTEV 377
>gi|325300073|ref|YP_004259990.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319626|gb|ADY37517.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 458
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 178/416 (42%), Gaps = 48/416 (11%)
Query: 18 FSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLY 77
F + SV CS + + IT +G K NT+A +AI + R+GG +
Sbjct: 35 FPMDSVTLCS------FPDRDFVITKYGASHADKKKNTRALAKAI---EACNRAGGGRVV 85
Query: 78 VPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFI 137
VP G + TG +L S++ LYL +GAV++ + D ++ L A + S+ G E Y +
Sbjct: 86 VPAGEWFTGPVHLKSNVNLYLEEGAVLRFSDDPADY-LPAVMTSW-EGLE--CYNYSPLV 141
Query: 138 HGDGLQDVVITGENGTIDGQGAIWWNMWRQR-----------------TLPFT------- 173
+ ++V ITG+ W +W +R +P
Sbjct: 142 YAFECENVAITGKGVLAPDMDT--WKIWFKRPQAHLHALAQLYSMASTDVPVELRQMARG 199
Query: 174 ----RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 229
RP+LI F + +++ + SPFW IH C++ V+R + + A N DGID
Sbjct: 200 ENHLRPHLIHFNRCKHVLLDGFKIRQSPFWTIHLYMCNSGVVRNLDV--QAHGHNNDGID 257
Query: 230 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 289
+ S N +E GDD V +KSG ++ P I +R + +GSE
Sbjct: 258 FEMSRNFLVEHCTFDQGDDAVVIKSGRNQDAWRLNTPCENIVVRHCAIRKGHVLLGIGSE 317
Query: 290 TSGGVENVLAEHINL-YNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGD 348
SGGV N+ + +V +KTN RGGFI NI + ++ + + +I DV
Sbjct: 318 MSGGVRNIYMHDCTVPESVQRLFFLKTNHRRGGFIENIYLENIEAGDMLRAFEIDTDVLY 377
Query: 349 HPDDKF--NPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 402
D L + GI +K+V ++G K P + + N+ + +
Sbjct: 378 QWKDLVPTYERKLTRIKGIYMKNVHCKSADAIYELKGEKEEPIRDVFIENVKVDTI 433
>gi|116619802|ref|YP_821958.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116222964|gb|ABJ81673.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 535
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 174/400 (43%), Gaps = 52/400 (13%)
Query: 37 DKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTL 96
+ +I D+G DG T AFR AI + +GG ++VP G Y TG L S++ L
Sbjct: 26 EHFNILDYGAKNDGSAPATGAFRAAIQAAKA---AGGGTVFVPAGKYTTGPIELVSNLVL 82
Query: 97 YLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDG 156
Y GAV++ P + R + + I G L++V + G G +
Sbjct: 83 YFDAGAVVEFPAQ--RLPFVK-----SRQQSIEALTPVPLIGGSNLENVTVAGR-GVLKS 134
Query: 157 QGAIWWN-MWRQRTLP----------------------------------FTRPNLIEFM 181
W M RQ+ RP+ + M
Sbjct: 135 NNEDWMKLMPRQKATTADPGSANGPNWEKLLTMLEVKTPAPEAAYLAAAPELRPSFVRTM 194
Query: 182 NSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDS 241
SR+++I + F SP W IH +Y NVV+R V I+ +TDGI DSS NV I +
Sbjct: 195 ESRNVLIEGLQFVGSPMWTIHLLYSDNVVVRDV-IIETYPGVHTDGIAVDSSRNVRISNC 253
Query: 242 YISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEH 301
YI TGDD + +K+G D G+ P+ ++I + + +GSETSG V N++A +
Sbjct: 254 YIDTGDDGIVIKAGKDSDGLRVNRPTENVSITNCSVHHAHGAVTIGSETSGWVRNLVASN 313
Query: 302 INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG---DVGDHPDDKFNP-- 356
I +G+ +K+ GRGG + ++ + MEN + I G+ P + P
Sbjct: 314 ITCDGTQMGVRIKSRRGRGGGVEDVRFDNWTMENVGTAVNITNYYLMEGEKPANDPEPVS 373
Query: 357 NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 396
N PV I I ++ + + I+GL + + +S+
Sbjct: 374 NRTPVFRNIAISNMTVNHARVAIDIEGLPEMNVSNLRISD 413
>gi|225420387|ref|ZP_03762690.1| hypothetical protein CLOSTASPAR_06732 [Clostridium asparagiforme
DSM 15981]
gi|225040964|gb|EEG51210.1| hypothetical protein CLOSTASPAR_06732 [Clostridium asparagiforme
DSM 15981]
Length = 519
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 143/310 (46%), Gaps = 21/310 (6%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+++ DFG GDG +T A + AI R + +P G Y L + L L
Sbjct: 82 LNVRDFGAAGDGIKDDTLAIQSAIMACPPQGR-----VLIPAGRYSFVCLFLKDGINLEL 136
Query: 99 AKGAVIKATQDTWNWPLIAPLPSY---------GRGRERPGGRYMSFIHGDGLQDVVITG 149
KGA + A D +P + Y G P + I G +++V I G
Sbjct: 137 EKGAELSAVTDRERFPFYPGMVPYTDQTGDYCLGTWEGDPQKMFCGLITGVHVKNVNIYG 196
Query: 150 ENGTIDGQGAI--WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCS 207
E GT++G + WW+ ++ + + RP + +I + + +NSP W IHP + +
Sbjct: 197 E-GTLNGNASHENWWHNCKEMKIAW-RPRAVFLNGCENISLVGLTVKNSPSWTIHPYFSN 254
Query: 208 NVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPS 267
++ + +LAP DS NTDG+DP+S V + + S GDD +AVKSG G Y PS
Sbjct: 255 HLRFLGLNVLAPKDSHNTDGLDPESCRQVELAGIHFSVGDDCIAVKSGKIYMGKTYRTPS 314
Query: 268 SGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 327
ITIR+ + + + +GSE GV ++ + G+ +KT GRG +
Sbjct: 315 EHITIRQCSMNDGHGSVVIGSEIGAGVRDLTVRDCIFKDTDRGLRIKTRRGRG---EDCV 371
Query: 328 VSDVYMENAR 337
V V EN R
Sbjct: 372 VDRVAFENIR 381
>gi|298482100|ref|ZP_07000288.1| glycoside Hydrolase Family 28 [Bacteroides sp. D22]
gi|298271657|gb|EFI13230.1| glycoside Hydrolase Family 28 [Bacteroides sp. D22]
Length = 460
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 158/342 (46%), Gaps = 40/342 (11%)
Query: 34 YRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSH 93
Y + ITD+G G+ NTKA AI + +SGG + VP G++LTG + S+
Sbjct: 47 YPDKDFLITDYGAKNGGEVNNTKAIAAAI---EACHKSGGGRVVVPAGIWLTGPIHFKSN 103
Query: 94 MTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGT 153
+ LYL + A++ T + +++ L A + S+ G E Y ++ ++V ITG+ GT
Sbjct: 104 VNLYLEENAILNFTDNPFDY-LPAVMTSW-EGLE--CYNYSPLLYAFECENVAITGK-GT 158
Query: 154 IDGQGAIWWNMWRQRTLPFT----------------------------RPNLIEFMNSRS 185
+ + W +W +R P RP+LI F ++
Sbjct: 159 LQPKMDTW-KVWFKRPQPHLEALKELYTKASTDVPVIERQMAVGENHLRPHLIHFNRCKN 217
Query: 186 IIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYIST 245
+++ + SPFW IH C ++R + + A N DGID + S N +ED
Sbjct: 218 VLLDGFKIRESPFWTIHLYMCDGGLVRNLDV--KAHGHNNDGIDFEMSRNFLVEDCSFDQ 275
Query: 246 GDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLY 305
GDD V +K+G ++ P I IR + + +GSE SGG+ N+
Sbjct: 276 GDDAVVIKAGRNQDAWRLNTPCENIVIRNCQILKGHTLLGIGSEISGGIRNIYMHDCTAP 335
Query: 306 N-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV 346
N V VKTN RGGFI N+ + +V A++ ++I +V
Sbjct: 336 NSVMRLFFVKTNHRRGGFIENVYMKNVQAGMAQRVLEIDTEV 377
>gi|189467900|ref|ZP_03016685.1| hypothetical protein BACINT_04292 [Bacteroides intestinalis DSM
17393]
gi|189436164|gb|EDV05149.1| FG-GAP repeat protein [Bacteroides intestinalis DSM 17393]
Length = 1068
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 158/342 (46%), Gaps = 40/342 (11%)
Query: 34 YRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSH 93
+ N SI ++G V GKT+NTKA +AI + ++GG + +P G +LTG +L S+
Sbjct: 50 FPNRDFSIANYGAVKGGKTINTKAIAKAI---KACNKAGGGRVVIPAGEWLTGPVHLMSN 106
Query: 94 MTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGT 153
+ LYL+ GA+++ T + ++ L A + S+ G E Y ++ ++V ITG GT
Sbjct: 107 VNLYLSDGAILRFTDNPEDY-LPAVMTSW-EGME--CYNYSPLVYAFDCENVAITG-TGT 161
Query: 154 IDGQGAIWWNMWRQRTLPFT----------------------------RPNLIEFMNSRS 185
+ W W +R P RP+LI F ++
Sbjct: 162 LQPIMDTW-RKWFKRPKPHMDALAELYTMASTDVPVEKRQMAKGENNLRPHLIHFNRCKN 220
Query: 186 IIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYIST 245
+++ + SPFW IH C ++R + + A N DG+D + S N IED
Sbjct: 221 VLLDQFKIRESPFWTIHLYMCDGGIVRNLDVYAHGH--NNDGVDLEMSRNFLIEDCKFDQ 278
Query: 246 GDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLY 305
GDD V +K+G ++ P I IR + + +GSE SGG+ NV
Sbjct: 279 GDDAVVIKAGRNQDAWRLDTPCENIVIRNCDIIKGHTLLGIGSEMSGGIRNVYMHDCAAP 338
Query: 306 N-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV 346
+ V KTN RGGFI NI + +V ++ ++I DV
Sbjct: 339 DSVFRLFFAKTNHRRGGFIENIHMENVKAGKMQRVLEIDTDV 380
>gi|224536297|ref|ZP_03676836.1| hypothetical protein BACCELL_01169 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522091|gb|EEF91196.1| hypothetical protein BACCELL_01169 [Bacteroides cellulosilyticus
DSM 14838]
Length = 473
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 153/309 (49%), Gaps = 24/309 (7%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
++TD+G GD ++NT A ++AI ++GG ++ PG+YLTGS + +++ L+++
Sbjct: 48 NVTDYGAKGDALSMNTMAIQKAI---DAAEQAGGGIVVFHPGIYLTGSLFVGNNVNLHIS 104
Query: 100 KGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGA 159
KG + +QD ++ I + G E P + I+ G ++ I+G+ G I+G+G
Sbjct: 105 KGVTLIGSQDIGDYKKIDTRVA-GIEMEWPS----ALINIIGKKNAAISGD-GVINGRGK 158
Query: 160 IWWN-MWRQRT------------LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYC 206
++W+ W R RP I ++ + +++ FW++H +Y
Sbjct: 159 VFWDKYWNMREDYEAKGLRWIVDYDCERPRGILIAECENVTVRDIVLYQPGFWSLHILYS 218
Query: 207 SNVVIRYVTIL--APADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYG 264
++ I + I P+TDGID DSS + ++++ I+ DD +K+G D G+
Sbjct: 219 KHITIDGIIISNNIEGHGPSTDGIDIDSSEYILVQNANINCNDDNFCLKAGRDSDGLRVN 278
Query: 265 HPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 324
P + IR S GSETSGG+ N++A + G+ K+ RGG I
Sbjct: 279 RPCQYVVIRDCVAGSGGGMFTCGSETSGGIRNIVAYRMKGVGTKCGLRFKSTCQRGGVIE 338
Query: 325 NITVSDVYM 333
+I + D+ M
Sbjct: 339 DIYLYDIEM 347
>gi|212690884|ref|ZP_03299012.1| hypothetical protein BACDOR_00372 [Bacteroides dorei DSM 17855]
gi|345512466|ref|ZP_08791992.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|212666566|gb|EEB27138.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|229438023|gb|EEO48100.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
Length = 1095
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/368 (29%), Positives = 175/368 (47%), Gaps = 23/368 (6%)
Query: 27 SGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTG 86
S ++ + N + +I ++G G+G + T + I H +GG + +P G YL+G
Sbjct: 696 SKLISIGKNNREYNIKEYGVKGNGYS-ETATLQRIINEAAH---NGGGTIVIPAGEYLSG 751
Query: 87 SFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRE-RPGGRYMSFIHGDGLQDV 145
+ + L + K A + +T D +P+I P+ G E R +++F H DG++
Sbjct: 752 ALFFPRGVDLRIEKNAKLISTVDPNEFPVI---PTRFEGIEKRWRCAFLNFDHSDGVK-- 806
Query: 146 VITGENGTIDGQGAIWWNMWRQRTLPFT---RPNLIEFMNSRSIIISNVIFQNSPFWNIH 202
+ GE G IDG+G W + +PF RP L+ F + IS + N W +H
Sbjct: 807 -VYGE-GVIDGKGVEW------KKIPFGNSGRPRLVCFTDCPGGKISGLKMINQASWCLH 858
Query: 203 PVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA 262
+Y + I + I A P++DGID DSS+++ I + I DD +++KSG DE G
Sbjct: 859 VLYTNGFTIDGIDIRALEYIPSSDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRR 918
Query: 263 YGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVG-IHVKTNIGRGG 321
G PS I I + G+A+GSE SG + NV + N + K+ RGG
Sbjct: 919 VGRPSENILIENCHFAYGHGGVAMGSEISGDIRNVTIRSCLMDNENWSPLRFKSQPSRGG 978
Query: 322 FIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLI 381
+ NIT D+ ++ AR I + P L + I K++ G + Q +G +
Sbjct: 979 TVENITFEDIIIKGARSIFDINMEWRMVPPLLPAHYPLTCLRNIHFKNING-EAQSAGTM 1037
Query: 382 QGLKNSPF 389
G K +PF
Sbjct: 1038 YGFKEAPF 1045
>gi|265752310|ref|ZP_06088103.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|263237102|gb|EEZ22572.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
Length = 1095
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/368 (29%), Positives = 175/368 (47%), Gaps = 23/368 (6%)
Query: 27 SGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTG 86
S ++ + N + +I ++G G+G + T + I H +GG + +P G YL+G
Sbjct: 696 SKLISIGKNNREYNIKEYGVKGNGYS-ETATLQRIINEAAH---NGGGTIVIPAGEYLSG 751
Query: 87 SFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRE-RPGGRYMSFIHGDGLQDV 145
+ + L + K A + +T D +P+I P+ G E R +++F H DG++
Sbjct: 752 ALFFPRGVDLRIEKNAKLISTVDPNEFPVI---PTRFEGIEKRWRCAFLNFDHSDGVK-- 806
Query: 146 VITGENGTIDGQGAIWWNMWRQRTLPFT---RPNLIEFMNSRSIIISNVIFQNSPFWNIH 202
+ GE G IDG+G W + +PF RP L+ F + IS + N W +H
Sbjct: 807 -VYGE-GVIDGKGVEW------KKIPFGNSGRPRLVCFTDCPGGKISGLKMINQASWCLH 858
Query: 203 PVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA 262
+Y + I + I A P++DGID DSS+++ I + I DD +++KSG DE G
Sbjct: 859 VLYTNGFTIDGIDIRALEYIPSSDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRR 918
Query: 263 YGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVG-IHVKTNIGRGG 321
G PS I I + G+A+GSE SG + NV + N + K+ RGG
Sbjct: 919 VGRPSENILIENCHFAYGHGGVAMGSEISGDIRNVTIRSCLMDNENWSPLRFKSQPSRGG 978
Query: 322 FIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLI 381
+ NIT D+ ++ AR I + P L + I K++ G + Q +G +
Sbjct: 979 TVENITFEDIIIKGARSIFDINMEWRMVPPLLPAHYPLTCLRNIHFKNING-EAQSAGTM 1037
Query: 382 QGLKNSPF 389
G K +PF
Sbjct: 1038 YGFKETPF 1045
>gi|423229002|ref|ZP_17215407.1| hypothetical protein HMPREF1063_01227 [Bacteroides dorei CL02T00C15]
gi|423244841|ref|ZP_17225915.1| hypothetical protein HMPREF1064_02121 [Bacteroides dorei CL02T12C06]
gi|392634755|gb|EIY28667.1| hypothetical protein HMPREF1063_01227 [Bacteroides dorei CL02T00C15]
gi|392641228|gb|EIY35012.1| hypothetical protein HMPREF1064_02121 [Bacteroides dorei CL02T12C06]
Length = 1095
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/368 (29%), Positives = 175/368 (47%), Gaps = 23/368 (6%)
Query: 27 SGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTG 86
S ++ + N + +I ++G G+G + T + I H +GG + +P G YL+G
Sbjct: 696 SKLISIGKNNREYNIKEYGVKGNGYS-ETATLQRIINEAAH---NGGGTIVIPAGEYLSG 751
Query: 87 SFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRE-RPGGRYMSFIHGDGLQDV 145
+ + L + K A + +T D +P+I P+ G E R +++F H DG++
Sbjct: 752 ALFFPRGVDLRIEKNAKLISTVDPNEFPVI---PTRFEGIEKRWRCAFLNFDHSDGVK-- 806
Query: 146 VITGENGTIDGQGAIWWNMWRQRTLPFT---RPNLIEFMNSRSIIISNVIFQNSPFWNIH 202
+ GE G IDG+G W + +PF RP L+ F + IS + N W +H
Sbjct: 807 -VYGE-GVIDGKGVEW------KKIPFGNSGRPRLVCFTDCPGGKISGLKMINQASWCLH 858
Query: 203 PVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA 262
+Y + I + I A P++DGID DSS+++ I + I DD +++KSG DE G
Sbjct: 859 VLYTNGFTIDGIDIRALEYIPSSDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRR 918
Query: 263 YGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVG-IHVKTNIGRGG 321
G PS I I + G+A+GSE SG + NV + N + K+ RGG
Sbjct: 919 VGRPSENILIENCHFAYGHGGVAMGSEISGDIRNVTIRSCLMDNENWSPLRFKSQPSRGG 978
Query: 322 FIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLI 381
+ NIT D+ ++ AR I + P L + I K++ G + Q +G +
Sbjct: 979 TVENITFEDIIIKGARSIFDINMEWRMVPPLLPAHYPLTCLRNIHFKNING-EAQSAGTM 1037
Query: 382 QGLKNSPF 389
G K +PF
Sbjct: 1038 YGFKEAPF 1045
>gi|423239843|ref|ZP_17220958.1| hypothetical protein HMPREF1065_01581 [Bacteroides dorei CL03T12C01]
gi|392645468|gb|EIY39195.1| hypothetical protein HMPREF1065_01581 [Bacteroides dorei CL03T12C01]
Length = 1095
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/368 (29%), Positives = 175/368 (47%), Gaps = 23/368 (6%)
Query: 27 SGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTG 86
S ++ + N + +I ++G G+G + T + I H +GG + +P G YL+G
Sbjct: 696 SKLISIGKNNREYNIKEYGVKGNGYS-ETATLQRIINEAAH---NGGGTIVIPAGEYLSG 751
Query: 87 SFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRE-RPGGRYMSFIHGDGLQDV 145
+ + L + K A + +T D +P+I P+ G E R +++F H DG++
Sbjct: 752 ALFFPRGVDLRIEKNAKLISTVDPNEFPVI---PTRFEGIEKRWRCAFLNFDHSDGVK-- 806
Query: 146 VITGENGTIDGQGAIWWNMWRQRTLPFT---RPNLIEFMNSRSIIISNVIFQNSPFWNIH 202
+ GE G IDG+G W + +PF RP L+ F + IS + N W +H
Sbjct: 807 -VYGE-GVIDGKGVEW------KKIPFGNSGRPRLVCFTDCPGGKISGLKMINQASWCLH 858
Query: 203 PVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA 262
+Y + I + I A P++DGID DSS+++ I + I DD +++KSG DE G
Sbjct: 859 VLYTNGFTIDGIDIRALEYIPSSDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRR 918
Query: 263 YGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVG-IHVKTNIGRGG 321
G PS I I + G+A+GSE SG + NV + N + K+ RGG
Sbjct: 919 VGRPSENILIENCHFAYGHGGVAMGSEISGDIRNVTIRSCLMDNENWSPLRFKSQPSRGG 978
Query: 322 FIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLI 381
+ NIT D+ ++ AR I + P L + I K++ G + Q +G +
Sbjct: 979 TVENITFEDIIIKGARSIFDINMEWRMVPPLLPAHYPLTCLRNIHFKNING-EAQSAGTM 1037
Query: 382 QGLKNSPF 389
G K +PF
Sbjct: 1038 YGFKEAPF 1045
>gi|224538432|ref|ZP_03678971.1| hypothetical protein BACCELL_03326 [Bacteroides cellulosilyticus
DSM 14838]
gi|224519937|gb|EEF89042.1| hypothetical protein BACCELL_03326 [Bacteroides cellulosilyticus
DSM 14838]
Length = 435
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/349 (30%), Positives = 162/349 (46%), Gaps = 51/349 (14%)
Query: 29 IVPMRYRNDKISITDFGGVGDGK-TLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGS 87
IVP + + ITD+ DGK +L TKA +AI GG + +P G+Y T
Sbjct: 14 IVPPTFPDKNYVITDYY---DGKDSLYTKAINQAI---TECSVQGGGKVIIPKGIYPTAP 67
Query: 88 FNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVI 147
L S++ L+LA AV+K T D + L + + G + I+ ++ I
Sbjct: 68 IRLKSNVNLHLADSAVLKFTTD---YNLFDTVRTRLEGID--CYNISPLIYAYEEVNIAI 122
Query: 148 TGENGTIDGQG--AIWWNMWRQR----------------------TLPFT---------- 173
TG NG +DGQ + W+ R R ++PF
Sbjct: 123 TG-NGIMDGQADRSNWFCDERIRGVVQKDGKHTNEKTLLYEMKEDSVPFDKRVFSGKSSI 181
Query: 174 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 233
RP I ++I++ +PFW IHP+ NV IR V + + N DG DP+S
Sbjct: 182 RPQFINLYKCKNILLEGFTINRAPFWLIHPLLSENVTIRKVKM--QSHGYNNDGCDPESC 239
Query: 234 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 293
+NV IE TGDD +A+KSG DE G + PS I +R +G+A+GSE +GG
Sbjct: 240 NNVLIEYCDFDTGDDCIAIKSGRDEDGRFWNIPSENIIVRNCRMKDGHAGVAIGSEVTGG 299
Query: 294 VENVLAEHINLYNVGVG--IHVKTNIGRGGFIRNITVSDVYMENARKGI 340
NV E+ + + + I +K+N RGG + N+ V ++++ ++ I
Sbjct: 300 CRNVWVENCRMDSPELDRIIRIKSNAIRGGEVENLFVRNIFVGECKESI 348
>gi|423301868|ref|ZP_17279891.1| hypothetical protein HMPREF1057_03032 [Bacteroides finegoldii
CL09T03C10]
gi|408470959|gb|EKJ89491.1| hypothetical protein HMPREF1057_03032 [Bacteroides finegoldii
CL09T03C10]
Length = 752
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 170/378 (44%), Gaps = 46/378 (12%)
Query: 4 FLVTLSILLSYFNCFSLASVVTCSGIVPMR------YRNDKISITDFGGVGDGKTLNTKA 57
F V S++ + + + + PM+ Y + ITD+G G+T NTKA
Sbjct: 301 FAVEASVVEALISASEQYTTIKVEAPFPMQPIKEFIYPDKDFVITDYGAKSGGETDNTKA 360
Query: 58 FREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIA 117
AI + ++GG + VP G++LTG + S++ LYL + AV+ + + ++ L A
Sbjct: 361 IAAAI---EACYKAGGGRVVVPDGIWLTGPIHFKSNVNLYLEENAVLSFSDNPKDY-LPA 416
Query: 118 PLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFT---- 173
+ S+ G E Y ++ ++V I+G+ GT+ + W +W +R P
Sbjct: 417 VMTSW-EGLE--CYNYSPLLYAFECENVAISGK-GTLQPKMGTW-RVWFKRPQPHLEALK 471
Query: 174 ------------------------RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNV 209
RP+LI F ++I + + SPFW IH C
Sbjct: 472 ELYTKASTGVPVEERQMAVGENNLRPHLIHFNRCKNIQLEGFRIRESPFWTIHIYMCDGG 531
Query: 210 VIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSG 269
V+R + + A N DGID + S N +E+ GDD V +K+G ++ P
Sbjct: 532 VVRNLDVRAHGH--NNDGIDFEMSKNFLVENCSFDQGDDAVVIKAGRNQDAWRLNTPCEN 589
Query: 270 ITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYN-VGVGIHVKTNIGRGGFIRNITV 328
I IR + + +GSE SGG+ N+ + N V VKTN RGGFI NI +
Sbjct: 590 IVIRNCQILKGHTLLGIGSEISGGIRNIYMHDCTVPNSVMRLFFVKTNHRRGGFIENIYM 649
Query: 329 SDVYMENARKGIKIAGDV 346
DV N ++ ++I +V
Sbjct: 650 KDVNAGNVQRVLEIDTEV 667
>gi|237712628|ref|ZP_04543109.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|229453949|gb|EEO59670.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
Length = 478
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/368 (29%), Positives = 175/368 (47%), Gaps = 23/368 (6%)
Query: 27 SGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTG 86
S ++ + N + +I ++G G+G + T + I H +GG + +P G YL+G
Sbjct: 79 SKLISIGKNNREYNIKEYGVKGNGYS-ETATLQRIINEAAH---NGGGTIVIPAGEYLSG 134
Query: 87 SFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRE-RPGGRYMSFIHGDGLQDV 145
+ + L + K A + +T D +P+I P+ G E R +++F H DG++
Sbjct: 135 ALFFPRGVDLRIEKNAKLISTVDPNEFPVI---PTRFEGIEKRWRCAFLNFDHSDGVK-- 189
Query: 146 VITGENGTIDGQGAIWWNMWRQRTLPFT---RPNLIEFMNSRSIIISNVIFQNSPFWNIH 202
+ GE G IDG+G W + +PF RP L+ F + IS + N W +H
Sbjct: 190 -VYGE-GVIDGKGVEW------KKIPFGNSGRPRLLCFTDCPGGKISGLKMINQASWCLH 241
Query: 203 PVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA 262
+Y + I + I A P++DGID DSS+++ I + I DD +++KSG DE G
Sbjct: 242 VLYTNGFTIDGIDIRALEYIPSSDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRR 301
Query: 263 YGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVG-IHVKTNIGRGG 321
G PS I I + G+A+GSE SG + NV + N + K+ RGG
Sbjct: 302 VGRPSENILIENCHFAYGHGGVAMGSEISGDIRNVTIRSCLMDNENWSPLRFKSQPSRGG 361
Query: 322 FIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLI 381
+ NIT D+ ++ AR I + P L + I K++ G + Q +G +
Sbjct: 362 TVENITFEDIIIKGARSIFDINMEWRMVPPLLPAHYPLTCLRNIHFKNING-EAQSAGTM 420
Query: 382 QGLKNSPF 389
G K +PF
Sbjct: 421 YGFKEAPF 428
>gi|262408407|ref|ZP_06084954.1| pectate lyase [Bacteroides sp. 2_1_22]
gi|294646414|ref|ZP_06724057.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294807852|ref|ZP_06766636.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345508621|ref|ZP_08788247.1| pectate lyase [Bacteroides sp. D1]
gi|229445709|gb|EEO51500.1| pectate lyase [Bacteroides sp. D1]
gi|262353959|gb|EEZ03052.1| pectate lyase [Bacteroides sp. 2_1_22]
gi|292638241|gb|EFF56616.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294444947|gb|EFG13630.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
Length = 460
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 157/342 (45%), Gaps = 40/342 (11%)
Query: 34 YRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSH 93
Y + ITD+G GK NTKA AI + +SGG + VP G++LTG + S+
Sbjct: 47 YPDKDFLITDYGAKNGGKVNNTKAIAAAI---EACHKSGGGRVVVPAGIWLTGPIHFKSN 103
Query: 94 MTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGT 153
+ LYL + A++ T + ++ L A + S+ G E Y ++ ++V ITG+ GT
Sbjct: 104 VNLYLEENAILNFTDNPSDY-LPAVMTSW-EGLE--CYNYSPLLYAFECENVAITGK-GT 158
Query: 154 IDGQGAIWWNMWRQRTLPFT----------------------------RPNLIEFMNSRS 185
+ + W +W +R P RP+LI F ++
Sbjct: 159 LQPKMDTW-KVWFKRPQPHLEALKELYTKASTDVPVIERQMAVGENHLRPHLIHFNRCKN 217
Query: 186 IIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYIST 245
+++ + SPFW IH C ++R + + A N DGID + S N +ED
Sbjct: 218 VLLDGFKIRESPFWTIHLYMCDGGLVRNLDV--KAHGHNNDGIDFEMSRNFLVEDCSFDQ 275
Query: 246 GDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLY 305
GDD V +K+G ++ P I IR + + +GSE SGG+ N+
Sbjct: 276 GDDAVVIKAGRNQDAWRLNTPCENIVIRNCQILKGHTLLGIGSEISGGIRNIYMHDCTAP 335
Query: 306 N-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV 346
N V VKTN RGGFI N+ + +V A++ ++I +V
Sbjct: 336 NSVMRLFFVKTNHRRGGFIENVYMKNVQAGMAQRVLEIDTEV 377
>gi|239628555|ref|ZP_04671586.1| glycoside Hydrolase [Clostridiales bacterium 1_7_47_FAA]
gi|239518701|gb|EEQ58567.1| glycoside Hydrolase [Clostridiales bacterium 1_7_47FAA]
Length = 716
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 178/404 (44%), Gaps = 56/404 (13%)
Query: 44 FGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAV 103
FG V D + T+A + AI I R GG L +P G TG+ L S + L+L
Sbjct: 29 FGVVPDSGAVQTQALQRAIDTIS---REGGGRLLLPGGTIRTGALELKSGVELHLQDRES 85
Query: 104 IKA---TQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAI 160
+ A + ++P++ + P + I+ D+ +TGE GT+DG
Sbjct: 86 VLAFVNEEPELHYPVV-----FSHWEATPCYNFSPLIYACDAHDIAVTGE-GTLDGGADF 139
Query: 161 --WWN-------MW-------------------------RQRTL---PFTRPNLIEFMNS 183
WWN W QR + RPN I+ +
Sbjct: 140 GHWWNWHHQVEDAWSDDKPDLQLEDRKALRRMNVDGVPVEQRVFGPGHYLRPNFIQTIRC 199
Query: 184 RSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYI 243
+++ +NSP W ++PV C ++ + VT+ + N DG DP+S + V I +
Sbjct: 200 SRVLLQGFTLKNSPMWQLNPVMCRSLTVDGVTLYS--HGANNDGCDPESCNGVHIRNCRF 257
Query: 244 STGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLA--EH 301
TGDD +++KSG D G G P + I + GIA+GSE SGG+ VLA
Sbjct: 258 DTGDDCISLKSGRDRDGRMAGIPCENVLIENNEFADGHGGIALGSEMSGGIRRVLAVNNR 317
Query: 302 INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPV 361
+ N+ + +KTN RGG + ++ ++D M++ G + G + +D N + LP
Sbjct: 318 FSSPNLTYALRLKTNARRGGRVEDVILADSVMDHV-HGAAVHGTM--LYEDGRNGSDLPE 374
Query: 362 VNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGP 405
+ ITI+++ ++ P TG+ L NI + GVA P
Sbjct: 375 FHNITIENIVAHGGDYGIFLEAFDEVPVTGLTLRNIRIDGVARP 418
>gi|300789895|ref|YP_003770186.1| endopolygalacturonase [Amycolatopsis mediterranei U32]
gi|384153411|ref|YP_005536227.1| endopolygalacturonase [Amycolatopsis mediterranei S699]
gi|399541775|ref|YP_006554437.1| endopolygalacturonase [Amycolatopsis mediterranei S699]
gi|299799409|gb|ADJ49784.1| endopolygalacturonase [Amycolatopsis mediterranei U32]
gi|340531565|gb|AEK46770.1| endopolygalacturonase [Amycolatopsis mediterranei S699]
gi|398322545|gb|AFO81492.1| endopolygalacturonase [Amycolatopsis mediterranei S699]
Length = 457
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 177/404 (43%), Gaps = 38/404 (9%)
Query: 34 YRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPG-VYLTGSFNLTS 92
+ + + IT +G DGKT NT A +AI +GG + VP G +LTG+ L S
Sbjct: 55 FPDRRFPITGYGAKNDGKTDNTAAIAKAI---DACVAAGGGHVIVPGGGSFLTGAIRLKS 111
Query: 93 HMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENG 152
++ L+L G+V+K + D +P + L Y G E M + + + +++ +TG G
Sbjct: 112 NVDLHLEAGSVLKFSGDAAKFPNV--LTRY-EGIECVNHSPMIYAYQE--KNIGLTGS-G 165
Query: 153 TIDGQGAIWWNMWRQRTLPFT--------------------RPNLIEFMNSRSIIISNVI 192
T+D WN R T R +E +++I +
Sbjct: 166 TLDAAATSSWNKGSDRAYLETLVAKGTPPEKRVVPGSGHTMRSAFVEPYACENVLIQGIT 225
Query: 193 FQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAV 252
+NS FW +HP C NV + V+ NTDG DP+S +V I + + DD +A+
Sbjct: 226 LKNSMFWQLHPTLCRNVTVDGVSTDPSTAHSNTDGCDPESCDHVVIANCTLGAHDDNIAI 285
Query: 253 KSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLY-NVGVGI 311
KSG D G P + + + + I GSE +GG+ NV A + + + +
Sbjct: 286 KSGRDADGRRVNVPCQNLVVVNCVMNGNWGAITCGSEQTGGIRNVYAYKLTVKGDTKFAL 345
Query: 312 HVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVW 371
+VK+N RGGF NI + V AR + + + +P TI +
Sbjct: 346 YVKSNTLRGGFSENINLDSVSGTFARNFVYVTSTYNSQTG-----SYVPSFGPFTISNCS 400
Query: 372 GTKVQQSGL-IQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSD 414
TK+ + GL N+ G ++N +GV+ TS LK D
Sbjct: 401 STKIAGKTFDVSGLSNAHVHGFAVANSTFKGVSD-TSNTLKYVD 443
>gi|355672899|ref|ZP_09058620.1| hypothetical protein HMPREF9469_01657 [Clostridium citroniae
WAL-17108]
gi|354814926|gb|EHE99524.1| hypothetical protein HMPREF9469_01657 [Clostridium citroniae
WAL-17108]
Length = 442
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 117/417 (28%), Positives = 192/417 (46%), Gaps = 66/417 (15%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPG-VYLTGSFNLTSHMTLYL 98
++ D+G GDG + + A ++AI +GG + +P G Y++GS L S++ LY+
Sbjct: 4 NVRDYGAAGDGASKDRNAIQKAI---DACSEAGGGRVVLPGGGTYMSGSLVLRSNVELYV 60
Query: 99 AKGAVIKATQDTWNWPLIAP------------LPSYGRGRERPGGRYMSFIHGDGLQDVV 146
GAV+KA+ D ++ + P LPSY RY FI+G G +++
Sbjct: 61 ESGAVLKASTDPSDYQPLDPQDPEGSVEHEESLPSYINCEYDGKPRYY-FIYGRGGENIR 119
Query: 147 ITGENGTIDGQGAIWWNMWRQRTLP---FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHP 203
ITG GTIDG I++ + + + R +I + + + +V FW +H
Sbjct: 120 ITG-FGTIDGSEEIYYGKQIRYHIEGAYYPRIPMILMEDVEHLTVRDVTLTRCAFWTLHM 178
Query: 204 VYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKS--GWDEYGI 261
C +V++ V IL N DGIDPD +V I + ++ DD + +K+ G+++YG
Sbjct: 179 AGCRDVLVDSVRILNNLRMANCDGIDPDHCQDVRIVNCHVECADDCIVLKNTKGFEKYG- 237
Query: 262 AYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEH--INLYNVGVGIHVKTNIGR 319
P I I T S S + +G+E+ EN++ E+ I+ N G+ +H++
Sbjct: 238 ----PCKNILISGCTLISTSSAVKIGTESEDDFENIIIENCCISRTNRGISLHLRDK--- 290
Query: 320 GGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSG 379
G IRN+ VS+V +E R + G A PV IT+ D ++ G
Sbjct: 291 -GNIRNVLVSNVTIETRRFSEQWWG------------RAEPVY--ITVMD------RKEG 329
Query: 380 LIQGLKNSPFTGICLSNINLQGVAG---PTSPP-----LKCSDVSGSAYQVKPWPCS 428
+ G + + L +IN +G G SP LK +V + + WPC
Sbjct: 330 VTAG----QISNVRLRDINCRGENGIFICASPDHVIRGLKLENVHVTLEKQSKWPCD 382
>gi|356544252|ref|XP_003540568.1| PREDICTED: probable polygalacturonase At3g15720-like [Glycine max]
Length = 402
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 121/434 (27%), Positives = 197/434 (45%), Gaps = 64/434 (14%)
Query: 8 LSILLSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQH 67
+ +L++ F L S +CS + + ++ D+G +GDG T +++AF +A + +
Sbjct: 1 MEVLIAIFFLLYLVSHCSCSRLREAAINLNTFNVMDYGAIGDGLTDDSQAFLKA-WSMVC 59
Query: 68 LRRSGGTLLYVPPG-------VYLTGSFNLTS-HMTLYLAKGAVIKATQDTWNWPLIAPL 119
++G L VPPG + +G + +S H L +G V+ A + T W
Sbjct: 60 AMKNGAATLKVPPGKTFMLKPLQFSGPCSFSSVHFQL---EGDVV-APKSTEAW------ 109
Query: 120 PSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIE 179
+ + +++ F + DGL +I G G IDG G++WWN + ++ +RP +
Sbjct: 110 ------KGQDSSKWIDFSNVDGL---IIDG-GGQIDGSGSVWWNSCKVKSC--SRPTALS 157
Query: 180 FMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIE 239
N ++ ++ NS +I ++ I VTI AP DSPNTDGID SS + I+
Sbjct: 158 IHNCNNLQLTGTRHLNSARNHISINNSNHTHIFNVTITAPQDSPNTDGIDVSQSSYILIQ 217
Query: 240 DSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG----VE 295
S I+TGDD +A+ SG I +GIT P GI+VGS G VE
Sbjct: 218 RSTIATGDDCIAMNSGTSYVNI------TGITC------GPGHGISVGSLGKKGTCQTVE 265
Query: 296 NVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFN 355
+V + N G+ +KT G G+ RNI + + N + I I D + ++
Sbjct: 266 HVHVSNCNFKGADNGMRIKTWPGGCGYARNIKFEHIVLTNTKNPIIIDQDYENVQNEDKK 325
Query: 356 PNALPVVNGITIKDVWGTKVQQSGLIQGL-----------------KNSPFTGICLSNIN 398
+ ++G+T + V GT ++ +I S + + S N
Sbjct: 326 QTSEVQISGVTYRYVNGTCNSETAIILNCGAGAGCTDIFMDLVNITSTSSGSNVLASCNN 385
Query: 399 LQGVAGPTSPPLKC 412
GVA TSPP+ C
Sbjct: 386 AHGVAASTSPPVSC 399
>gi|255642114|gb|ACU21323.1| unknown [Glycine max]
Length = 203
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/105 (60%), Positives = 77/105 (73%)
Query: 169 TLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGI 228
T TRP LIE M S +I ISN+ NSP WN+HPVY SN++++ +TI AP SPNTDGI
Sbjct: 95 TRRHTRPYLIELMFSDNIQISNLTLLNSPSWNVHPVYSSNIIVQGITIYAPVTSPNTDGI 154
Query: 229 DPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIR 273
+PDS +NV IED YI +GDD VAVKSGWDEYGI +G P+ + I
Sbjct: 155 NPDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIE 199
>gi|399087913|ref|ZP_10753337.1| endopolygalacturonase [Caulobacter sp. AP07]
gi|398031883|gb|EJL25254.1| endopolygalacturonase [Caulobacter sp. AP07]
Length = 458
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 179/417 (42%), Gaps = 68/417 (16%)
Query: 33 RYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTS 92
R+ + D G G +T+ F+ AI ++GG + V G YL G L S
Sbjct: 32 RFPERVCDVRDHGAGGTRIWFDTEGFQAAI---DACAKAGGGTVRVTRGEYLIGPIWLKS 88
Query: 93 HMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENG 152
++ L L KGA + A D +P G I+ +V + GE G
Sbjct: 89 NIRLELQKGAEVLAATDPALFPQ---------------GERAGLINVKDADNVAVVGE-G 132
Query: 153 TIDGQGAIWWN----MWR-----------QRTLPFTRPNLIEFMNSRSIIISNVIFQNSP 197
IDGQGA+WW +WR ++ RP LI +S +I V +NSP
Sbjct: 133 LIDGQGAVWWERIRAIWRANPNFATDGQARQQQKDDRPRLILVSHSTNIRFEGVRIENSP 192
Query: 198 FWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWD 257
+++ +V I V I APA +PNTD IDP S +V I ++ IS GDD+VA+KS
Sbjct: 193 SFHLVLNDTDHVTIDRVRITAPAHAPNTDAIDPIDSRHVVITNNVISVGDDIVAIKSN-- 250
Query: 258 EYGIAYGHPSSGITIRRVTGSSPFS--GIAVGSETSGGVENVLAEHINLYNVGVGIHVKT 315
G HP + + ++G++ + GI +GS TSGGV V E+ + G+ +KT
Sbjct: 251 --GPDPRHPDAVSSDILISGNTILAGRGICIGSGTSGGVTRVRVENNSFDGSMYGLRIKT 308
Query: 316 NIGRGGFIRNITVSDVYMENARK-------------------------GIKIAGDVGDHP 350
G+GG +R++ + M+N G + + P
Sbjct: 309 MRGKGGKVRDVVFKNNRMKNVETPLVFTSYYEYRPLDLKAATALLQPGGFLLGNQIWPGP 368
Query: 351 DDKFNP---NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 404
D P + P + I + + T +G++ GL P G+ L ++ ++ G
Sbjct: 369 TDPAQPIAADKTPDMADIVVDGLTATGADLAGIVVGLPERPIAGLTLRDVRIEAKHG 425
>gi|30688821|ref|NP_850359.1| Polygalacturonase ADPG2 [Arabidopsis thaliana]
gi|226711460|sp|Q8RY29.2|ADPG2_ARATH RecName: Full=Polygalacturonase ADPG2; Short=AtADPG2; Short=PG
ADPG2; AltName: Full=Pectinase ADPG2; AltName:
Full=Protein ARABIDOPSIS DEHISCENCE ZONE
POLYGALACTURONASE 2; Flags: Precursor
gi|330254946|gb|AEC10040.1| Polygalacturonase ADPG2 [Arabidopsis thaliana]
Length = 433
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 177/375 (47%), Gaps = 44/375 (11%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPG-VYLTGSFNLT--SHMT 95
+S++DFG GDGKT +T+AF A + +G L VP G YL S LT +
Sbjct: 68 VSVSDFGAKGDGKTDDTQAFVNAWKK--ACSSNGAVNLLVPKGNTYLLKSIQLTGPCNSI 125
Query: 96 LYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITG-ENGTI 154
L + + A+Q ++ I+ +I DG+ ++ + G + G +
Sbjct: 126 LTVQIFGTLSASQKRSDYKDISK-----------------WIMFDGVNNLSVDGGDTGVV 168
Query: 155 DGQGAIWW--NMWRQRTLPFTR-PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVI 211
DG G WW + R + P T+ P + F NS+S+I+ N+ +N+ I CSNV +
Sbjct: 169 DGNGETWWQNSCKRNKAKPCTKAPTALTFYNSKSLIVKNLKVRNAQQIQISIEKCSNVQV 228
Query: 212 RYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGIT 271
V + APADSPNTDGI ++ N+ + +S I TGDD ++++SG S +
Sbjct: 229 SNVVVTAPADSPNTDGIHITNTQNIRVSESIIGTGDDCISIESG-----------SQNVQ 277
Query: 272 IRRVTGSSPFSGIAVGS----ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 327
I +T P GI++GS + V V + L G+ +KT G G NI
Sbjct: 278 INDIT-CGPGHGISIGSLGDDNSKAFVSGVTVDGAKLSGTDNGVRIKTYQGGSGTASNII 336
Query: 328 VSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL-IQGLKN 386
++ M+N + I I D D +A+ V N + +D+ GT ++ + KN
Sbjct: 337 FQNIQMDNVKNPIIIDQDYCDKSKCTTEKSAVQVKN-VVYRDISGTSASENAITFNCSKN 395
Query: 387 SPFTGICLSNINLQG 401
P GI L +N++G
Sbjct: 396 YPCQGIVLDRVNIKG 410
>gi|336404054|ref|ZP_08584754.1| hypothetical protein HMPREF0127_02067 [Bacteroides sp. 1_1_30]
gi|335943751|gb|EGN05584.1| hypothetical protein HMPREF0127_02067 [Bacteroides sp. 1_1_30]
Length = 460
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 157/342 (45%), Gaps = 40/342 (11%)
Query: 34 YRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSH 93
Y + ITD+G G+ NTKA AI + +SGG + VP G++LTG + S+
Sbjct: 47 YPDKDFLITDYGAKNGGEVNNTKAIAAAI---EACHKSGGGRVVVPAGIWLTGPIHFKSN 103
Query: 94 MTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGT 153
+ LYL + A++ T + ++ L A + S+ G E Y ++ ++V I G+ GT
Sbjct: 104 VNLYLEENAILNFTDNPSDY-LPAVMTSW-EGLE--CYNYSPLLYAFECENVAIIGK-GT 158
Query: 154 IDGQGAIWWNMWRQRTLPFT----------------------------RPNLIEFMNSRS 185
+ + W +W +R P RP+LI F ++
Sbjct: 159 LQPKMDTW-KVWFKRPQPHLEALKELYTKASTDVPVIERQMAVGENHLRPHLIHFNRCKN 217
Query: 186 IIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYIST 245
+++ + SPFW IH C ++R + + A D N DGID + S N +ED
Sbjct: 218 VLLDGFKIRESPFWTIHLYMCDGGLVRNLDVKAHGD--NNDGIDFEMSRNFLVEDCSFDQ 275
Query: 246 GDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLY 305
GDD V +K+G ++ P I IR + + +GSE SGG+ N+
Sbjct: 276 GDDAVVIKAGRNQDAWRLNTPCENIVIRNCQILKGHTLLGIGSEISGGIRNIYMHDCTAP 335
Query: 306 N-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV 346
N V VKTN RGGFI N+ + +V A++ ++I +V
Sbjct: 336 NSVMRLFFVKTNHRRGGFIENVYMKNVQAGTAQRVLEIDTEV 377
>gi|299148459|ref|ZP_07041521.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|298513220|gb|EFI37107.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
Length = 461
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 158/342 (46%), Gaps = 40/342 (11%)
Query: 34 YRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSH 93
Y + ITDFG V G+ NTKA AI + +SGG + VP G +LTG + S+
Sbjct: 48 YPDKDFIITDFGAVNGGRVDNTKAITSAI---EACNQSGGGRVVVPAGTWLTGPIHFKSN 104
Query: 94 MTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGT 153
+ LYL + AV+ T + ++ L A + S+ G E Y ++ ++V ITG+ GT
Sbjct: 105 VNLYLEENAVLNFTDNPSDY-LPAVMTSW-EGLE--CYNYSPLLYAFECENVAITGK-GT 159
Query: 154 IDGQGAIWWNMWRQR-----------------TLPFT-----------RPNLIEFMNSRS 185
+ + W +W +R +P RP+LI F ++
Sbjct: 160 LQPKMDTW-KVWFKRPQSHLEALKELYTKASTNIPVIERQMAIGENHLRPHLIHFNRCKN 218
Query: 186 IIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYIST 245
+++ + SPFW IH C ++R + + A N DGID + S N +ED
Sbjct: 219 VLLDGFKIRESPFWTIHLYMCDGGLVRNLDV--KAHGHNNDGIDFEMSRNFLVEDCSFDQ 276
Query: 246 GDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLY 305
GDD V +K+G ++ P I IR + + +GSE SGG+ N+
Sbjct: 277 GDDAVVIKAGRNQDAWRLNTPCENIVIRNCQILKGHTLLGIGSEISGGIRNIYMHDCTAP 336
Query: 306 N-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV 346
N V VKTN RGGFI N+ + +V A++ ++I +V
Sbjct: 337 NSVMRLFFVKTNHRRGGFIENVYMKNVKAGTAQRVLEIDTEV 378
>gi|393786392|ref|ZP_10374528.1| hypothetical protein HMPREF1068_00808 [Bacteroides nordii
CL02T12C05]
gi|392660021|gb|EIY53638.1| hypothetical protein HMPREF1068_00808 [Bacteroides nordii
CL02T12C05]
Length = 477
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/405 (24%), Positives = 176/405 (43%), Gaps = 58/405 (14%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
++TD+G GD +NT A ++AI ++GG ++ PG+YLTG+ + +++ +
Sbjct: 51 NVTDYGAKGDALEMNTTAIQKAI---DAAEQAGGGIVTFSPGIYLTGALFVGNNVNFNIP 107
Query: 100 KGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYM----SFIHGDGLQDVVITGENGTID 155
KG + +QD + Y + R G M + ++ G ++ I+G+ G I+
Sbjct: 108 KGTTLIGSQD---------IDDYKKIDTRVAGVEMNWPSALVNIIGKKNAAISGD-GVIN 157
Query: 156 GQGAIWWNMWRQRTLPF-------------TRPNLIEFMNSRSIIISNVIFQNSPFWNIH 202
G+G ++W+ +R + RP I ++ + N++ FW++H
Sbjct: 158 GRGKVFWDKYRSMRKEYDPKGLRWIVDYDCERPRGILIAECENVTVENIVLYQPGFWSLH 217
Query: 203 PVYCSNVVIRYVTILAPADS--PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 260
+Y V + + I + P+TDGID DSS + +++S I+ DD +K+G D G
Sbjct: 218 ILYSKYVTVDGIIISNNIEGRGPSTDGIDIDSSEYILVQNSNINCNDDNFCLKAGRDSDG 277
Query: 261 IAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 320
+ P + IR GSETSGG+ N++A ++ G+ K+ RG
Sbjct: 278 LRVNRPCRYVVIRDCIAGHGDGLFTCGSETSGGINNIVAYNMTGMGTKYGLRFKSTCQRG 337
Query: 321 GFIRNITVSDVYMENARKGIKIAGDVGDHP-----------DDKFNP------------- 356
G I +I + ++ M R + D+ HP D+K P
Sbjct: 338 GVIEDIYLCNIEMIGVRDPFVV--DLNWHPAYSTSKLPEGYDEKNVPTHWIKMLTPVDPK 395
Query: 357 NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 401
P + +V T Q + G++NS G N++ G
Sbjct: 396 QGTPKFRNVHFMNVTATNAQTCIKVSGIENSTIDGFDFDNVHFSG 440
>gi|336415457|ref|ZP_08595796.1| hypothetical protein HMPREF1017_02904 [Bacteroides ovatus
3_8_47FAA]
gi|335940336|gb|EGN02203.1| hypothetical protein HMPREF1017_02904 [Bacteroides ovatus
3_8_47FAA]
Length = 461
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 156/342 (45%), Gaps = 40/342 (11%)
Query: 34 YRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSH 93
Y + ITDFG V G+ NTKA AI + +SGG + VP G +LTG + S+
Sbjct: 48 YPDKDFIITDFGAVNGGRVDNTKAITSAI---EACNQSGGGRVVVPAGTWLTGPIHFKSN 104
Query: 94 MTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGT 153
+ LYL + AV+ T + ++ L A + S+ G E Y ++ ++V ITG+ GT
Sbjct: 105 VNLYLEENAVLNFTDNPSDY-LPAVMTSW-EGLE--CYNYSPLLYAFECENVAITGK-GT 159
Query: 154 IDGQGAIWWNMWRQRTLPFT----------------------------RPNLIEFMNSRS 185
+ + W +W +R P RP+LI F ++
Sbjct: 160 LQPKMDTW-KVWFKRPQPHLEALKELYAKASTNIPVIERQMAIGENHLRPHLIHFNRCKN 218
Query: 186 IIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYIST 245
+++ + SPFW IH C ++R + + A N D ID + S N +ED
Sbjct: 219 VLLDGFKIRESPFWTIHLYMCDGGLVRNLDV--KAHGHNNDDIDFEMSRNFLVEDCSFDQ 276
Query: 246 GDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLY 305
GDD V +K+G ++ P I IR + + +GSE SGG+ N+
Sbjct: 277 GDDAVVIKAGRNQDAWRLNTPCENIVIRNCQILKGHTLLGIGSEISGGIRNIYMHDCTAP 336
Query: 306 N-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV 346
N V VKTN RGGFI N+ + +V A++ ++I +V
Sbjct: 337 NSVMRLFFVKTNHRRGGFIENVYMKNVKAGTAQRVLEIDTEV 378
>gi|334342614|ref|YP_004555218.1| glycoside hydrolase [Sphingobium chlorophenolicum L-1]
gi|334103289|gb|AEG50712.1| glycoside hydrolase family 28 [Sphingobium chlorophenolicum L-1]
Length = 482
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 167/392 (42%), Gaps = 59/392 (15%)
Query: 71 SGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPG 130
+GG + VP G + +G+ +L S++ L++ A I + ++P++ + R
Sbjct: 93 AGGGRVIVPAGTWESGAIHLKSNVNLHVQADATILFSTRPQDYPIV-----FTRWEGMEL 147
Query: 131 GRYMSFIHGDGLQDVVITGENGTIDGQGAI--WWN----------------MWRQRTL-- 170
Y ++ G ++V +TG GT+DGQ WW+ M QR
Sbjct: 148 MNYSPLVYAHGQENVALTGA-GTLDGQAGPDNWWSWKGPWNGTVEHGWKEGMADQRPARA 206
Query: 171 --------------------PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVV 210
+ RP ++F ++I V + SPFW +HPV C NVV
Sbjct: 207 RLFQMAEANVSPEKRIFGEGDYLRPAFVQFYACDRVLIEGVKLRRSPFWQVHPVLCRNVV 266
Query: 211 IRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGI 270
+R V I PN DG DP+S + IE TGDD +AV SG + G P+ I
Sbjct: 267 VRGVDIHGLG--PNNDGCDPESVDMMLIEQCTFDTGDDCIAVNSGRNADGRRLAAPAQNI 324
Query: 271 TIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITV 328
IR G+ VGS+ SGG ++ AE + ++ I K N RGG + +
Sbjct: 325 VIRDCRMKEGHGGVVVGSQISGGARHIYAERCTMDSPDLWYAIRFKNNALRGGLLEHFYF 384
Query: 329 SDVYM-ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS 387
D+ + + +R I + + D F PV+ I ++ + + + QGL +
Sbjct: 385 RDLTVGQVSRAAITCDFNYEEGADGPFK----PVLRDILVQRMTVARAARVLDSQGLPGA 440
Query: 388 PFTGICLSNINLQGVAGPT----SPPLKCSDV 415
P + + + GV P+ SP ++ S V
Sbjct: 441 PVGTVRIEDSRFDGVTHPSILAHSPDIRLSRV 472
>gi|451820152|ref|YP_007456353.1| endopolygalacturonase [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451786131|gb|AGF57099.1| endopolygalacturonase [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 506
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 171/370 (46%), Gaps = 55/370 (14%)
Query: 80 PGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWN--WPLIAPLPSYGRGRERPGGRYMSFI 137
P VY TG+ + S++ L++ + A++K ++ N +PL+ Y R + FI
Sbjct: 115 PNVYYTGAIYIKSNIELHIEENAILKFVRNKTNEFYPLV-----YTRWEGIEMMNFSPFI 169
Query: 138 HGDGLQDVVITGENGTIDG-QGAIWWNMWR-----------QRTLPFT------------ 173
+ ++ ITG+ G +DG W W+ QR F
Sbjct: 170 YSYEENNIAITGK-GILDGCADEFNWMPWKFGYFNEEDQQIQRERLFNMGQEGVDVRNER 228
Query: 174 ---------RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 224
RP I+ + +I+I ++ NSPFW ++PV C N+ + + I + N
Sbjct: 229 IFSDDISTIRPPFIQPYKTNNILIRDITILNSPFWEVNPVLCENIKVSGIRI--DTNLYN 286
Query: 225 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 284
DG+DP+S ++ IE+ Y TGDD +A+KSG + G G P+S I IR GI
Sbjct: 287 NDGVDPESCKDMIIENCYFLTGDDCIAIKSGRNNEGRNIGIPTSNIIIRNNEFKDGHGGI 346
Query: 285 AVGSETSGGVENVLAEHINLYN---VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 341
+GSE SGGV N+ H N ++ + I KTN RGG + NI + + + ++ +
Sbjct: 347 TIGSEISGGVNNIFG-HDNYFDSEELDYPIRFKTNAERGGLLENIYIKNSTVNKSKVAV- 404
Query: 342 IAGDVGDHPDDKFNPNALPVVNGI---TIKDVWGTKV--QQSGLIQGLKNSPFTGICLSN 396
I D ++ N N P++ I IK V G + + + ++G +++P I + +
Sbjct: 405 IHADF--FYEEGTNGNHKPILRNIALSNIKTVDGGSIDAKNALYLKGFEDAPIENILIED 462
Query: 397 INLQGVAGPT 406
L GV G
Sbjct: 463 ALLNGVKGEA 472
>gi|356503131|ref|XP_003520365.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase
At3g15720-like [Glycine max]
Length = 472
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 172/400 (43%), Gaps = 55/400 (13%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNL---- 90
+N ++ DFG VGDGKT +T+AF +A ++ + TLL P V+L S L
Sbjct: 111 QNTIYNVIDFGAVGDGKTDDTQAFLKA-WQSMCEAQGTSTLLIPPNKVFLVTSMXLKGPC 169
Query: 91 TSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGE 150
+ +G ++ T+D W G + I + + I G
Sbjct: 170 VAPSVQIQLQGVIVAPTKDAW-----------------VEGNLNTLIMISNVNGLTIDGS 212
Query: 151 NGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVV 210
G IDG G+ WW ++ P RP+++ + S+ ++N+ NSP +IH C
Sbjct: 213 GGLIDGYGSAWWAC---KSCP--RPSVLIINSCNSVSVTNLNMINSPKSHIHVNGCEGAT 267
Query: 211 IRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEY----GIAYGHP 266
++ I AP DSPNTDG D +S N+ IEDS I+TGDD +A+ SG Y GIA G
Sbjct: 268 FSHINISAPGDSPNTDGFDISTSKNIMIEDSTIATGDDCIAI-SGGSSYINVTGIACG-- 324
Query: 267 SSGITIRRVTGSSPFSGIAVGS--ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 324
P GI++GS + V+ V + + G +KT G+ +
Sbjct: 325 -------------PGHGISIGSLGKKFDTVQEVYVRNCSFIRTTNGARIKTFPNGMGYAK 371
Query: 325 NITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGL 384
IT D+ +E R I I + D + V+ +T + + GT + +
Sbjct: 372 QITFEDITLEQTRNPIIIDQEYRDLTNQAVE------VSDVTYRGIHGTSLDGRAITLDC 425
Query: 385 KNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKP 424
S GI L IN+ S C++ G+A P
Sbjct: 426 GESGCYGIVLDQINIVSCLTGKSASCFCNNAHGTATATNP 465
>gi|383120496|ref|ZP_09941224.1| hypothetical protein BSIG_2496 [Bacteroides sp. 1_1_6]
gi|382985014|gb|EES68535.2| hypothetical protein BSIG_2496 [Bacteroides sp. 1_1_6]
Length = 462
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 166/376 (44%), Gaps = 57/376 (15%)
Query: 17 CFSLASVVTC-----------SGIVPMR------YRNDKISITDFGGVGDGKTLNTKAFR 59
CF L SV T PM+ Y + ITDFG V G+ NTKA
Sbjct: 13 CFGLLSVATVMAGGNYKTVKVKAPFPMQPIKVFIYPDRDFKITDFGAVPGGEVDNTKAIA 72
Query: 60 EAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPL 119
AI ++GG + VP G++LTG + S++ L L + AV+ T + ++ L A +
Sbjct: 73 AAI---DACNKAGGGRVVVPAGIWLTGPVHFKSNVNLCLEEDAVLSFTDNPEDY-LPAVM 128
Query: 120 PSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFT------ 173
S+ G E Y ++ ++V I+G+ GT+ + W +W +R P
Sbjct: 129 TSW-EGLE--CYNYSPLLYAFECENVAISGK-GTLQPKMGTW-KVWFKRPAPHLQALKEL 183
Query: 174 ----------------------RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVI 211
RP+LI F +++++ + SPFW IH C ++
Sbjct: 184 YTKASTNVPVIERQMATGENHLRPHLIHFNRCKNVMLDGFKIRESPFWTIHLYMCDGGIV 243
Query: 212 RYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGIT 271
R + + A N DGID + S N +ED GDD V +K+G ++ P I
Sbjct: 244 RNLDVRAHGH--NNDGIDFEMSRNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIV 301
Query: 272 IRRVTGSSPFSGIAVGSETSGGVENVLAEHINL-YNVGVGIHVKTNIGRGGFIRNITVSD 330
IR + + +GSE SGG+ N+ Y+V VKTN RGGFI NI + +
Sbjct: 302 IRNCRILKGHTLLGIGSEISGGIRNIYMHDCTAPYSVMRLFFVKTNHRRGGFIENIYMKN 361
Query: 331 VYMENARKGIKIAGDV 346
V A++ ++I +V
Sbjct: 362 VASGTAQRVLEIDTEV 377
>gi|383315603|ref|YP_005376445.1| endopolygalacturonase [Frateuria aurantia DSM 6220]
gi|379042707|gb|AFC84763.1| endopolygalacturonase [Frateuria aurantia DSM 6220]
Length = 441
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 172/371 (46%), Gaps = 37/371 (9%)
Query: 55 TKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWP 114
T ++AI R GG L + GV++T L S + L+L GAV++ ++
Sbjct: 51 TSLLQQAIDRCSA---KGGGQLRLAAGVFMTAPLALRSGVDLHLDAGAVLRGVAGQQHY- 106
Query: 115 LIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMW-------RQ 167
P+Y R G + DG++ V I+GE G+IDG G WW +
Sbjct: 107 ----RPAYMNWPYRFGEALLGM---DGVRHVRISGE-GSIDGFGQQWWPQAQQARLTGEK 158
Query: 168 RTLPF--------TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP 219
+TL RP LIE S + I V N+P WN+ Y ++ IR V+IL P
Sbjct: 159 QTLALGIPASNGLPRPWLIEIHRSADVRIEGVHIINAPMWNLVTRYSHDIDIRGVSILNP 218
Query: 220 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTG-- 277
ADSPNTDGID +S +V I DS ISTGDD +A+KSG + P+ R+
Sbjct: 219 ADSPNTDGIDVVASRHVRIRDSRISTGDDCIAIKSGLPGSRL----PAEATVDVRIDHLW 274
Query: 278 SSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 337
G++VGSET G+ V + G+ +K+ RG I +I + M+
Sbjct: 275 LGRGHGLSVGSETLFGIRGVDVRDVVFQGTDAGVRIKSGRDRGNRISDIHFRHLRMKGVG 334
Query: 338 KGIKIAGDVGDHPDDKFNPNAL----PVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
I + ++ A+ P ++ +++ DV + +GL+ GL SP GI
Sbjct: 335 TAISVLAYYPKPAPEQDPAQAVTATTPWISDVSVTDVQAEGSRVAGLLIGLPESPLRGIR 394
Query: 394 LSNINLQGVAG 404
L +++LQ +G
Sbjct: 395 LGHLSLQAGSG 405
>gi|238916395|ref|YP_002929912.1| glycoside hydrolase family 28-like polygalacturonase [Eubacterium
eligens ATCC 27750]
gi|238871755|gb|ACR71465.1| Glycoside Hydrolase Family 28-like polygalacturonase [Eubacterium
eligens ATCC 27750]
Length = 458
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 142/315 (45%), Gaps = 59/315 (18%)
Query: 60 EAIYR-IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAP 118
+AI R I ++ GG + +P G++ T + S + L + K A++K ++D +PLI
Sbjct: 40 DAINRAINYISEKGGGTVVIPDGIWFTAPIEIKSDVELRIEKNAILKFSKDIDQYPLI-- 97
Query: 119 LPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIW------------WNMWR 166
+ +Y G+E R S I + ++ ITG G IDG G +W W
Sbjct: 98 ITNY-EGQECI--RAKSPITAENAINIGITG-GGVIDGSGDMWRPIKQFKITDRQWEALM 153
Query: 167 QRT------------LP----------------------------FTRPNLIEFMNSRSI 186
+++ +P F RP ++ + + I
Sbjct: 154 KKSQYIIDTKGGGIWMPTESSFKGNEHNIQLDAENALEKASEYYDFYRPVMVSLRHCKRI 213
Query: 187 IISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTG 246
++ V F+NSP WNIHP +C N+ +R VT+ P + N DGID +S V I + TG
Sbjct: 214 LLDGVTFKNSPAWNIHPFFCKNLTVRNVTVSNPYYAQNGDGIDVESCKKVHIHNCTFETG 273
Query: 247 DDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYN 306
DD + +KSG + P + I + G +GSE S G++NVL E+
Sbjct: 274 DDAICLKSGKNAVARQIEGPCEDVYIHDCLVNEGHGGFVIGSEMSRGIKNVLVENCTFLG 333
Query: 307 VGVGIHVKTNIGRGG 321
VG+ +K+ +GRGG
Sbjct: 334 TDVGVRIKSALGRGG 348
>gi|356503135|ref|XP_003520367.1| PREDICTED: probable polygalacturonase At3g15720-like [Glycine max]
Length = 452
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 171/396 (43%), Gaps = 47/396 (11%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNL---- 90
+N ++ DFG VGDGKT +T+AF +A + + + TLL P V+L S L
Sbjct: 91 QNTIYNVIDFGAVGDGKTDDTQAFLKAWQSMCEAQGTS-TLLIPPNKVFLVTSMLLKGPC 149
Query: 91 TSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGE 150
+ +G ++ T+D W G + I + + I G
Sbjct: 150 VAPSVQIQLQGVIVAPTKDAW-----------------VEGNLNTLIMISNVNGLTIDGS 192
Query: 151 NGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVV 210
G IDG G+ WW ++ P RP+++ + S+ ++N+ NSP +IH C
Sbjct: 193 GGLIDGYGSAWWAC---KSCP--RPSVLIINSCNSVSVTNLNMINSPKSHIHVNGCEGAT 247
Query: 211 IRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGI 270
++ I AP DSPNTDG D +S N+ IEDS I+TGDD +A+ G SS I
Sbjct: 248 FSHINISAPGDSPNTDGFDISTSKNIMIEDSTIATGDDCIAISGG-----------SSYI 296
Query: 271 TIRRVTGSSPFSGIAVGS--ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITV 328
+ + P GI++GS + V+ V + + G +KT G+ + IT
Sbjct: 297 NVTGI-ACGPGHGISIGSLGKKFDTVQEVYVRNCSFIRTTNGARIKTFPNGMGYAKQITF 355
Query: 329 SDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSP 388
D+ +E R I I + D + V+ +T + + GT + + S
Sbjct: 356 EDITLEQTRNPIIIDQEYRDLTNQAVE------VSDVTYRGIHGTSLDGRAITLDCGESG 409
Query: 389 FTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKP 424
GI L IN+ S C++ G+A P
Sbjct: 410 CYGIVLDQINIVSCLTGKSASCFCNNAHGTATATNP 445
>gi|293370067|ref|ZP_06616633.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|292634859|gb|EFF53382.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
Length = 461
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 157/342 (45%), Gaps = 40/342 (11%)
Query: 34 YRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSH 93
Y + ITDFG V G+ NTKA AI + +SGG + VP G +LTG + S+
Sbjct: 48 YPDKDFIITDFGAVNGGRVDNTKAITSAI---EACNQSGGGRVVVPAGTWLTGPIHFKSN 104
Query: 94 MTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGT 153
+ LYL + AV+ T + ++ L A + S+ G E Y ++ ++V ITG+ GT
Sbjct: 105 VNLYLEENAVLNFTDNPSDY-LPAVMTSW-EGLE--CYNYSPLLYAFECENVAITGK-GT 159
Query: 154 IDGQGAIWWNMWRQR-----------------TLPFT-----------RPNLIEFMNSRS 185
+ + W +W +R +P RP+LI F ++
Sbjct: 160 LQPKMDTW-KVWFKRPQSHLEALKELYTKASTNIPVIERQMAIGENHLRPHLIHFNRCKN 218
Query: 186 IIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYIST 245
+++ SPFW IH C ++R + + A N DGID + S N +ED
Sbjct: 219 VLLDGFKICESPFWTIHLYMCDGGLVRNLDV--KAHGHNNDGIDFEMSRNFLVEDCSFDQ 276
Query: 246 GDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLY 305
GDD V +K+G ++ P I IR + + +GSE SGG+ N+
Sbjct: 277 GDDAVVIKAGRNQDAWRLNTPCENIVIRNCQILKGHTLLGIGSEISGGIRNIYMHDCTAP 336
Query: 306 N-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV 346
N V VKTN RGGFI N+ + +V A++ ++I +V
Sbjct: 337 NSVMRLFFVKTNHRRGGFIENVYMKNVKAGTAQRVLEIDTEV 378
>gi|309779639|ref|ZP_07674398.1| polygalacturonase transmembrane protein [Ralstonia sp. 5_7_47FAA]
gi|349616569|ref|ZP_08895706.1| hypothetical protein HMPREF0989_03952 [Ralstonia sp. 5_2_56FAA]
gi|308921580|gb|EFP67218.1| polygalacturonase transmembrane protein [Ralstonia sp. 5_7_47FAA]
gi|348612214|gb|EGY61836.1| hypothetical protein HMPREF0989_03952 [Ralstonia sp. 5_2_56FAA]
Length = 671
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 109/182 (59%), Gaps = 18/182 (9%)
Query: 172 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS--PNTDGID 229
+ RP ++EF+ ++++ N N+PFW HPV+C+NVVIR VT+ DS PN DG D
Sbjct: 339 YLRPCMVEFIGCTNVLMENYRTVNTPFWQHHPVHCTNVVIRGVTV----DSIGPNNDGFD 394
Query: 230 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 289
PD+ SNV E+ +TGDD +A+KSG YG P+ I+ T +S GI +GSE
Sbjct: 395 PDACSNVLCENVTFNTGDDCIAIKSG-KNLDTGYG-PAQDHVIQNCTMNSGHGGITLGSE 452
Query: 290 TSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 342
GGV+N+ A ++ + N + + I +KTN+ RGGF++N V++V + N G+ +
Sbjct: 453 MGGGVQNIYARNLAMLNQFWATNSLNIAIRIKTNMNRGGFVKNFYVTNVSLPN---GVNL 509
Query: 343 AG 344
G
Sbjct: 510 TG 511
>gi|294674151|ref|YP_003574767.1| pectinase family protein/glycosyl hydrolase family 88 [Prevotella
ruminicola 23]
gi|294473505|gb|ADE82894.1| pectinase family protein/glycosyl hydrolase family 88 [Prevotella
ruminicola 23]
Length = 1596
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 189/414 (45%), Gaps = 66/414 (15%)
Query: 41 ITDFGGVGDGKTLNTKAF-REAIYRIQHL--RRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
IT +G KT NT A ++AI + L ++ GG ++ +LTG+ L S + L
Sbjct: 48 ITQYGA----KTTNTAAKNQKAIQKAIDLCSKKGGGRVVIPANQKFLTGAIQLKSSVNLE 103
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
+ +GAV++ +P++ + G E ++ +D+ ITG+ GTIDG
Sbjct: 104 VQEGAVLEFAFQPELYPIVE---TSWEGLE--CFNLSPCVYAFKAKDIAITGK-GTIDGG 157
Query: 158 GA--IWWNM-------WRQRTLP-------------------------------FT---- 173
G+ WW W++ T+ FT
Sbjct: 158 GSNDTWWPWNGNPRFGWKEGTISQRGGSRARLLKNGEDGVPMYNEKGERSPERVFTAQDG 217
Query: 174 -RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDS 232
RP L+ F I++ +V SPFW IHP++ +++ +R V ++ D PN DG DP+
Sbjct: 218 LRPQLVSFNKCEGILLEDVTLLRSPFWVIHPLHSTDITVRRVKMIN--DGPNGDGCDPEC 275
Query: 233 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSG 292
V IED + +TGDD +A+KSG + G PS I IR + G+ VGSE SG
Sbjct: 276 CDRVLIEDCFFNTGDDCIAIKSGRNRDGRERNMPSKNIIIRNCEMKNGHGGVVVGSEISG 335
Query: 293 GVENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI-KIAGDVGDH 349
G +NV A ++ + + +KTN RGG I NI + ++ + ++ + KI D +H
Sbjct: 336 GCQNVYAHDCVMDSPELERVLRIKTNSCRGGIIENINMRNITVGKCKESVLKINLDY-EH 394
Query: 350 PDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT-GICLSNINLQGV 402
++ P+V + +++V + Q I GL F I + N + GV
Sbjct: 395 -NEICCRGYYPIVRNVYMENVTSQQSQYGVQIIGLDEDTFVYDINVKNCHFNGV 447
>gi|239628551|ref|ZP_04671582.1| glycoside Hydrolase [Clostridiales bacterium 1_7_47_FAA]
gi|239518697|gb|EEQ58563.1| glycoside Hydrolase [Clostridiales bacterium 1_7_47FAA]
Length = 710
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 112/429 (26%), Positives = 195/429 (45%), Gaps = 58/429 (13%)
Query: 17 CFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLL 76
C+S A + P+ + N ++ +TD+G V D L+TKA + A I H+ GG ++
Sbjct: 16 CWSTAESILEQIHDPV-FPNLRVDVTDYGAVPDDGILDTKAIQAA---IDHVSAQGGGMV 71
Query: 77 YVPPGVYLTGSFNLTSHMTLYL-AKGAVIKATQDT--WNWPLIAPLPSYGRGRERPGGRY 133
+P G + TG+ L ++ L+L ++ V+ T+D N+PL+ +Y G P +
Sbjct: 72 VIPRGRFDTGAIVLKENVNLHLESEDTVLCFTRDIIPENYPLVL---AYYEG--APCYNW 126
Query: 134 MSFIHGDGLQDVVITGENGTIDGQG--AIWWNMW-------------------------- 165
I+ +G ++ +TG+ G +DGQ WW+ +
Sbjct: 127 SPLIYANGQDNIAVTGK-GRLDGQADQDTWWSWYGDTYIGQDYTRPSSSDVGILRRMVDD 185
Query: 166 ----RQRTL---PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILA 218
R+R F RPN I+ + ++++ + +N P W ++PV C+NV +R + +
Sbjct: 186 GVDVRKRVFGEGHFLRPNFIQVIGCENVLVEGISIKNPPMWGVNPVLCTNVTVRGIEV-- 243
Query: 219 PADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG---IAYGHPSSGITIRRV 275
+ N DG +P++ + V IED G D VAVKSG + G G + + IR
Sbjct: 244 DGNFNNNDGCNPENCNYVLIEDCRFQVGGDGVAVKSGRNRDGWELKEAGWSARNMVIRGN 303
Query: 276 TGSSPFSGIAVGSETSGGVENVLAE--HINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
+ SGIA GSE SG + ++ A+ ++ I K+N RGG + I +
Sbjct: 304 EFAGGTSGIAFGSEMSGDIRDIYADDNRFGTQSLDYAIRFKSNAARGGVVERIYIRGSRA 363
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
N R + I + D+ + + LP I I+D ++ P TG+
Sbjct: 364 SNIRY-VSIHATM--LYDEGWMGSYLPEYRDIRIEDFTANGGTYGIFMEAFDQVPITGLE 420
Query: 394 LSNINLQGV 402
L +++++ V
Sbjct: 421 LVDVDIRDV 429
>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
Length = 1112
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 122/230 (53%), Gaps = 24/230 (10%)
Query: 30 VPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFN 89
+ + R + +TDFG +GDGKT NTKAFREAI ++ GG L VPPG +LTGSFN
Sbjct: 842 LALNCRKHRAVLTDFGAIGDGKTSNTKAFREAITKLTTKAVDGGVQLIVPPGNWLTGSFN 901
Query: 90 LTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITG 149
LTSH TL++ +GA I A+QD +P+I PLPSYG R+ S I+G L DVVIT
Sbjct: 902 LTSHFTLFIQQGATILASQDESEYPMIPPLPSYGE------ARFTSLIYGSNLTDVVIT- 954
Query: 150 ENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV--IFQNSPFWNIHPV--- 204
+ I+ Q AI R +T R ++ + +R + + +F + + +HPV
Sbjct: 955 DVTLINTQSAI-----RIKT-AVGRGGYVKNIFARRFTMKTMKYVFWMTGSYKLHPVGGF 1008
Query: 205 ------YCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDD 248
SN+ R +T S +GI D + +C+ + I+ D
Sbjct: 1009 DPKALPEISNINYRDMTAENVTISAKLEGIKNDPFTGLCMSNVTIALSPD 1058
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 83/163 (50%), Gaps = 4/163 (2%)
Query: 277 GSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENA 336
G + F+ + GS + +V+ + L N I +KT +GRGG+++NI M+
Sbjct: 935 GEARFTSLIYGS----NLTDVVITDVTLINTQSAIRIKTAVGRGGYVKNIFARRFTMKTM 990
Query: 337 RKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 396
+ + G HP F+P ALP ++ I +D+ V S ++G+KN PFTG+C+SN
Sbjct: 991 KYVFWMTGSYKLHPVGGFDPKALPEISNINYRDMTAENVTISAKLEGIKNDPFTGLCMSN 1050
Query: 397 INLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGAC 439
+ + P C+DVSG +VKP PCS L T C
Sbjct: 1051 VTIALSPDPKKLQWNCTDVSGVTSRVKPEPCSLLPDKGTTMDC 1093
>gi|427402267|ref|ZP_18893339.1| hypothetical protein HMPREF9710_02935 [Massilia timonae CCUG 45783]
gi|425718800|gb|EKU81743.1| hypothetical protein HMPREF9710_02935 [Massilia timonae CCUG 45783]
Length = 432
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 170/363 (46%), Gaps = 46/363 (12%)
Query: 37 DKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTL 96
++ IT +G V D KT+NT A ++ I + R GGT++ VP GV+++G+ + L
Sbjct: 33 ERSDITAYGAVADDKTVNTAAIQQTIDALAA--RGGGTVV-VPRGVFVSGALFFKPGVHL 89
Query: 97 YLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYM-----SFIHGDGLQDVVITGEN 151
+LAKGAV+K + D ++P+ R R G + + ++ DG ++GE
Sbjct: 90 HLAKGAVLKCSTDLSHFPV---------RRTRIEGHFAENFNPALVNADGCDGFHLSGE- 139
Query: 152 GTIDGQGA-IWWNMWRQR------------TLPFTRPNLIEFMNSRSIIISNVIFQNSPF 198
GT+DG G IW W R ++P R LIE SR + + V F++S F
Sbjct: 140 GTLDGAGRPIWDRFWTLRKAYKDPGNFPNISVPRARLALIE--RSRGVTVEGVTFKDSQF 197
Query: 199 WNIHPVYCSNVVIRYVTILAPAD---SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSG 255
WN+H C +V +++ + P D +P+TDGID DS V I+ Y S DD +A K
Sbjct: 198 WNLHLYRCQDVTVKHARFVVPDDYEQAPSTDGIDLDSCQRVTIDGCYFSVTDDCIAAKGS 257
Query: 256 WDEYGIAYGH--PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHI----NLYNVGV 309
+ + P G+ +R S + +GSE + V ++L E ++ NV V
Sbjct: 258 RGPFALQDKDSPPVVGVHVRNCEFRRGHSVMTLGSEAT-LVRDILVEDCRVTGHVLNVAV 316
Query: 310 GIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKD 369
+K N+ + + +++ R I + D K P +V I ++D
Sbjct: 317 ---LKLRPDTPQHYENVHLRKLSLQSERGAIVSVQPWTQYVDLKGAPPPKSIVRNIRLED 373
Query: 370 VWG 372
+ G
Sbjct: 374 IEG 376
>gi|298383811|ref|ZP_06993372.1| glycoside Hydrolase Family 28 [Bacteroides sp. 1_1_14]
gi|298263415|gb|EFI06278.1| glycoside Hydrolase Family 28 [Bacteroides sp. 1_1_14]
Length = 464
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 165/376 (43%), Gaps = 57/376 (15%)
Query: 17 CFSLASVVTC-----------SGIVPMR------YRNDKISITDFGGVGDGKTLNTKAFR 59
CF L SV T PM+ Y + ITDFG V G+ NTKA
Sbjct: 15 CFGLLSVATVMAGGNYKTVKVKAPFPMQPIKVFIYPDRDFKITDFGAVPGGEVDNTKAIA 74
Query: 60 EAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPL 119
AI ++GG + VP G++LTG + S++ L L + AV+ T + ++ L A +
Sbjct: 75 AAI---DACNKAGGGRVVVPAGIWLTGPVHFKSNINLCLEENAVLSFTDNPEDY-LPAVM 130
Query: 120 PSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFT------ 173
S+ G E Y ++ ++V I+G+ GT+ + W +W +R P
Sbjct: 131 TSW-EGLE--CYNYSPLLYAFECENVAISGK-GTLQPKMGTW-KVWFKRPAPHLQALKEL 185
Query: 174 ----------------------RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVI 211
RP+LI F +++++ + SPFW IH C ++
Sbjct: 186 YTKASTNVPVIERQMATGENHLRPHLIHFNRCKNVMLDGFKIRESPFWTIHLYMCDGGIV 245
Query: 212 RYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGIT 271
R + + A N DGID + S N +ED GDD V +K+G ++ P I
Sbjct: 246 RNLDVRAHGH--NNDGIDFEMSRNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIV 303
Query: 272 IRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYN-VGVGIHVKTNIGRGGFIRNITVSD 330
IR + + +GSE SGG+ N+ N V VKTN RGGFI NI + +
Sbjct: 304 IRNCRILKGHTLLGIGSEISGGIRNIYMHDCTAPNSVMRLFFVKTNHRRGGFIENIYMKN 363
Query: 331 VYMENARKGIKIAGDV 346
V A++ ++I +V
Sbjct: 364 VASGTAQRVLEIDTEV 379
>gi|427387343|ref|ZP_18883399.1| hypothetical protein HMPREF9447_04432 [Bacteroides oleiciplenus YIT
12058]
gi|425725504|gb|EKU88375.1| hypothetical protein HMPREF9447_04432 [Bacteroides oleiciplenus YIT
12058]
Length = 923
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/372 (27%), Positives = 168/372 (45%), Gaps = 52/372 (13%)
Query: 65 IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGR 124
I + + GG + VPPG + +G L S++ L++A+GA I+ + D ++ + + +
Sbjct: 76 IVDVNKKGGGTVLVPPGRWKSGRIMLKSNVNLHIAEGAEIEFSGDIEDY--LPAVFTRHE 133
Query: 125 GRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQR-------------TLP 171
G E G +FI+ DG ++ +TG+ GTI G + R+R T+P
Sbjct: 134 GIELFGA--GAFIYADGENNIAVTGK-GTITGPA--LDSEVRKRTNTAAVVEIDVPATMP 188
Query: 172 -------------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILA 218
F P I +N ++ I + S WN+ P YC NV+IR +T+ +
Sbjct: 189 LNERLFDGMEGRDFQPPRTIAPINCTNVFIEGITMNRSALWNVVPTYCENVIIRGITVNS 248
Query: 219 PADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGS 278
+ P DGID +SS NV IE ++T DD +KSG E G+ G P++ + IR +
Sbjct: 249 -LEIPRGDGIDIESSKNVLIEYCTLNTHDDCFTLKSGRGEEGVHIGRPTANVVIRHSLAT 307
Query: 279 SPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK 338
+ GI GSET+G ++N+ A GI KT RGG N+ + M + +
Sbjct: 308 NGPGGITCGSETAGNIKNIYAHDCVFKGTMTGILFKTRRPRGGGTENVLYERIRMIDVKD 367
Query: 339 GIK--------IAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT 390
K G++ D + + PVV I ++D I + T
Sbjct: 368 AFKWELLGSKRWVGELADRMPLRAINSLTPVVRNIHVRD----------FIVESSDRMIT 417
Query: 391 GICLSNINLQGV 402
IC+ + L+ V
Sbjct: 418 AICIPEVPLRNV 429
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 115/229 (50%), Gaps = 20/229 (8%)
Query: 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLY 97
K ITD+G V D + T+ + I ++GG ++ +P G +L+GS LY
Sbjct: 537 KYCITDYGVVNDSTIVQTEKIQAVI---DSAEKNGGGVVIIPKGTFLSGSLFFKPKTHLY 593
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
L + A +K + D ++ ++ R + + + ++ D + ++G+ GTI+G
Sbjct: 594 LEEKATLKGSDDISDFAVVDT-----RMEGQSLKYFAALLNADEVDGFTVSGK-GTINGN 647
Query: 158 GAIWW-NMWRQR-------TLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNV 209
G +W + W +R + RP L+ NS+++ IS V NSPFW H C +
Sbjct: 648 GMRYWKSFWLRREVNPKCTNMDELRPRLLYVSNSKNVQISGVRLINSPFWTTHFYKCEQL 707
Query: 210 VIRYVTILAPAD---SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSG 255
+ + I +P +P+TDG+D D +NV I++ YIS DD +A+K G
Sbjct: 708 RLLNLHITSPTSPVHAPSTDGVDIDVCTNVLIKNCYISVDDDGIALKGG 756
>gi|29349563|ref|NP_813066.1| hypothetical protein BT_4155 [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341473|gb|AAO79260.1| pectate lyase [Bacteroides thetaiotaomicron VPI-5482]
Length = 448
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 165/376 (43%), Gaps = 57/376 (15%)
Query: 17 CFSLASVVTC-----------SGIVPMR------YRNDKISITDFGGVGDGKTLNTKAFR 59
CF L SV T PM+ Y + ITDFG V G+ NTKA
Sbjct: 2 CFGLLSVATVMAGGNYKTVKVKAPFPMQPIKVFIYPDRDFKITDFGAVPGGEVDNTKAIA 61
Query: 60 EAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPL 119
AI ++GG + VP G++LTG + S++ L L + AV+ T + ++ L A +
Sbjct: 62 AAI---DACNKAGGGRVVVPAGIWLTGPVHFKSNINLCLEEDAVLSFTDNPEDY-LPAVM 117
Query: 120 PSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFT------ 173
S+ G E Y ++ ++V I+G+ GT+ + W +W +R P
Sbjct: 118 TSW-EGLE--CYNYSPLLYAFECENVAISGK-GTLQPKMGTW-KVWFKRPAPHLQALKEL 172
Query: 174 ----------------------RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVI 211
RP+LI F +++++ + SPFW IH C ++
Sbjct: 173 YTKASTNVPVIERQMAIGENHLRPHLIHFNRCKNVMLDGFKIRESPFWTIHLYMCDGGIV 232
Query: 212 RYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGIT 271
R + + A N DGID + S N +ED GDD V +K+G ++ P I
Sbjct: 233 RNLDVRAHGH--NNDGIDFEMSRNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIV 290
Query: 272 IRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYN-VGVGIHVKTNIGRGGFIRNITVSD 330
IR + + +GSE SGG+ N+ N V VKTN RGGFI NI + +
Sbjct: 291 IRNCRILKGHTLLGIGSEISGGIRNIYMHDCTAPNSVMRLFFVKTNHRRGGFIENIYMKN 350
Query: 331 VYMENARKGIKIAGDV 346
V A++ ++I +V
Sbjct: 351 VASGTAQRVLEIDTEV 366
>gi|427383479|ref|ZP_18880199.1| hypothetical protein HMPREF9447_01232 [Bacteroides oleiciplenus YIT
12058]
gi|425728663|gb|EKU91518.1| hypothetical protein HMPREF9447_01232 [Bacteroides oleiciplenus YIT
12058]
Length = 432
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 135/276 (48%), Gaps = 24/276 (8%)
Query: 29 IVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSF 88
IV + DK ITD+ V D L T+ + I GG ++ +P G YL+G+
Sbjct: 37 IVNIETLGDKYKITDYSVVNDSTLLQTEKIQAVI---DQASSKGGGVVIIPKGTYLSGAL 93
Query: 89 NLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVIT 148
LYL +GAV+K + D N+P+I R + + + ++ DG+ I+
Sbjct: 94 FFKPKTHLYLEEGAVLKGSDDISNFPIINT-----RIEGQSLKYFAALVNADGVNGFTIS 148
Query: 149 GENGTIDGQGAIWW-NMWRQRT-------LPFTRPNLIEFMNSRSIIISNVIFQNSPFWN 200
G+ GTI+G G +W + W +R+ + RP L+ NS + IS V NSPFW
Sbjct: 149 GK-GTINGNGLRYWKSFWLRRSVIPKCTNMDELRPRLVHVSNSNDVQISGVRLINSPFWT 207
Query: 201 IHPVYCSNVVIRYVTILAPA---DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSG-- 255
H C+NV + + I +PA +P+TD ID D SNV +++ Y+S DD +A+K G
Sbjct: 208 THIYKCNNVKLLNLYIFSPAAPVKAPSTDAIDIDVCSNVLVKNCYLSVNDDAIALKGGKG 267
Query: 256 -WDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 290
W + G ++ + I T S + GSE+
Sbjct: 268 PWADKDSNNG-SNTNLIIEDCTFGFCHSALTCGSES 302
>gi|198275291|ref|ZP_03207822.1| hypothetical protein BACPLE_01450 [Bacteroides plebeius DSM 17135]
gi|198271874|gb|EDY96144.1| polygalacturonase (pectinase) [Bacteroides plebeius DSM 17135]
Length = 511
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 164/359 (45%), Gaps = 56/359 (15%)
Query: 18 FSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLY 77
F L + C+G + N + G VGDGKTLNT++ + AI L GG LY
Sbjct: 7 FILCGLFLCAGTIAATDYN----VLQQGAVGDGKTLNTQSLQSAI---DALHAKGGGQLY 59
Query: 78 VPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFI 137
P G YLTGS L S++TLYL K AV+ + +++P + + + I
Sbjct: 60 FPAGRYLTGSLQLKSNVTLYLEKEAVLLGSTSPYDYPGFSTEKELKVNNDHFD---QALI 116
Query: 138 HGDGLQDVVITGENGTIDGQGAIW-----------------WNMWRQRTLPFTRPNLIEF 180
+ +G +++ I GE G IDGQG +N +R+R P TRP L+
Sbjct: 117 YAEGAENIGIMGE-GCIDGQGRELALTIDSLHHTGELVDKHYNTYRKR--PNTRPKLLFM 173
Query: 181 MNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIED 240
N R + + F++ W + C+++ I + + A N DGID +V I +
Sbjct: 174 RNCRKVELRKTNFRSGAAWGLSFSLCADLTIDSLHVENRA-YWNNDGIDISDCKDVRISN 232
Query: 241 SYISTGDDLVAVKS----GWDEY-------------GIAYGHPSSG----ITIRRVTGSS 279
+I++ DD + +KS W++ I +G S G +TI +
Sbjct: 233 CFINSADDGICLKSHNRGAWNDRVSISNCHIISSASAIKFGTESLGGFKNVTIDNIRIKD 292
Query: 280 PF-SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG---GFIRNITVSDVYME 334
F S IA+ S +ENV +++ N G I ++ G G++RN+T+ +VY+E
Sbjct: 293 TFRSAIAIESVDGAEIENVQVSNVHAVNTGNAIFIRLGHRSGEQPGYLRNVTIKNVYVE 351
>gi|189467634|ref|ZP_03016419.1| hypothetical protein BACINT_04024 [Bacteroides intestinalis DSM
17393]
gi|189435898|gb|EDV04883.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 436
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 135/276 (48%), Gaps = 24/276 (8%)
Query: 29 IVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSF 88
IV + DK ITD+ V D + T+ + I GG ++ +P G YL+G+
Sbjct: 41 IVNIETLGDKYKITDYSVVNDSTLIQTEKIQAVI---DQASSKGGGVVIIPKGTYLSGAL 97
Query: 89 NLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVIT 148
LYL +GAV+K + D N+P+I R + + + ++ DG+ I+
Sbjct: 98 FFKPKTHLYLEEGAVLKGSDDISNFPIINT-----RIEGQSLKYFAALVNADGVNGFTIS 152
Query: 149 GENGTIDGQGAIWW-NMWRQRT-------LPFTRPNLIEFMNSRSIIISNVIFQNSPFWN 200
G+ GTI+G G +W + W +R+ + RP L+ NS + IS V NSPFW
Sbjct: 153 GK-GTINGNGLRYWKSFWLRRSVIPKCTNMDELRPRLVHISNSNDVQISGVRLINSPFWT 211
Query: 201 IHPVYCSNVVIRYVTILAPA---DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSG-- 255
H C+NV + + I +PA +P+TD ID D SNV +++ Y+S DD +A+K G
Sbjct: 212 THIYKCNNVKLLNLYIFSPAAPVKAPSTDAIDIDVCSNVLVKNCYLSVNDDAIALKGGKG 271
Query: 256 -WDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 290
W + G ++ I I T S + GSE+
Sbjct: 272 PWADKDSNNG-SNTNIIIEDCTYGFCHSALTCGSES 306
>gi|19310405|gb|AAL84942.1| At2g41850/T11A7.5 [Arabidopsis thaliana]
Length = 433
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 176/375 (46%), Gaps = 44/375 (11%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPG-VYLTGSFNLT--SHMT 95
+S++DFG GDGKT +T+AF A + +G L VP G YL S LT +
Sbjct: 68 VSVSDFGAKGDGKTDDTQAFVNAWKK--ACSSNGAVNLLVPKGNTYLLKSIQLTGPCNSI 125
Query: 96 LYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITG-ENGTI 154
L + + A+Q ++ I+ +I DG+ ++ + G + G +
Sbjct: 126 LTVQIFGTLSASQKRSDYKDISK-----------------WIMFDGVNNLSVDGGDTGVV 168
Query: 155 DGQGAIWW--NMWRQRTLPFTR-PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVI 211
DG G WW + R + P T P + F NS+S+I+ N+ +N+ I CSNV +
Sbjct: 169 DGNGETWWQNSCKRNKAKPCTXAPTALTFYNSKSLIVKNLKVRNAQQIQISIEKCSNVQV 228
Query: 212 RYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGIT 271
V + APADSPNTDGI ++ N+ + +S I TGDD ++++SG S +
Sbjct: 229 SNVVVTAPADSPNTDGIHITNTQNIRVSESIIGTGDDCISIESG-----------SQNVQ 277
Query: 272 IRRVTGSSPFSGIAVGS----ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 327
I +T P GI++GS + V V + L G+ +KT G G NI
Sbjct: 278 INDIT-CGPGHGISIGSLGDDNSKAFVSGVTVDGAKLSGTDNGVRIKTYQGGSGTASNII 336
Query: 328 VSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL-IQGLKN 386
++ M+N + I I D D +A+ V N + +D+ GT ++ + KN
Sbjct: 337 FQNIQMDNVKNPIIIDQDDCDKGKCTTEKSAVQVKN-VVYRDISGTSASENAITFNCSKN 395
Query: 387 SPFTGICLSNINLQG 401
P GI L +N++G
Sbjct: 396 YPCQGIVLDRVNIKG 410
>gi|423226292|ref|ZP_17212758.1| hypothetical protein HMPREF1062_04944 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392629720|gb|EIY23726.1| hypothetical protein HMPREF1062_04944 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 459
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 179/400 (44%), Gaps = 42/400 (10%)
Query: 34 YRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSH 93
Y N S+ DFG V G NTK+ AI ++GG + +P G +LTG +L S+
Sbjct: 46 YPNRNFSVVDFGAVKGGIADNTKSIAAAI---DACHKAGGGRVVIPEGEWLTGPVHLKSN 102
Query: 94 MTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGT 153
+ LYL++ AV+ T ++ L A + S+ G E Y ++ G ++V ITG+ G
Sbjct: 103 VNLYLSENAVLCFTDHPSDY-LPAVMTSW-EGME--CYNYSPLVYAIGCENVAITGK-GM 157
Query: 154 IDGQGAIWWNMWRQR------------TLPFT----------------RPNLIEFMNSRS 185
+ + W +W R T+ T RP+LI F R+
Sbjct: 158 LKPKMDTW-KVWFARPEAHLNALKELYTMASTDVPVEKRQMAVGENNLRPHLIHFNRCRN 216
Query: 186 IIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYIST 245
+++ + SPFW IH C+ + R + + A N DGID + + N +ED
Sbjct: 217 VLLDGFKIRESPFWTIHIYMCNGGIARNLDV--KAHGHNNDGIDLEMTRNFLVEDCTFDQ 274
Query: 246 GDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINL- 304
GDD V +K+G + P+ I IR + + +GSE SGG+ NV +
Sbjct: 275 GDDAVVIKAGRNRDAWRLNIPTENIVIRNCNIVEGHTLLGIGSEISGGIRNVYMHDCKVP 334
Query: 305 YNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKF--NPNALPVV 362
+V VKTN RG F+ NI + ++ + ++ ++I DV D + +
Sbjct: 335 QSVRRLFFVKTNHRRGAFVENIHMENIRAGHVQRVLEIDTDVLYQWKDLVPTYEERITRI 394
Query: 363 NGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 402
+GI +K+V T ++G P + + ++++ V
Sbjct: 395 DGIYMKNVVCTSADAIYELKGDAKLPVRNVVIEDVHVNEV 434
>gi|330816973|ref|YP_004360678.1| glycoside hydrolase family protein [Burkholderia gladioli BSR3]
gi|327369366|gb|AEA60722.1| Glycoside hydrolase, family 28 [Burkholderia gladioli BSR3]
Length = 672
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 104/180 (57%), Gaps = 14/180 (7%)
Query: 172 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 231
+ RP ++EF+ ++++ N QN+PFW HP C+NVVIR ++A + PN DG DPD
Sbjct: 340 YLRPCMVEFIGCTNVLMENYHTQNTPFWQHHPTDCTNVVIR--GVMADSIGPNNDGFDPD 397
Query: 232 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 291
+ NV + +TGDD +A+KSG D YG P+ ++ T +S GI +GSE
Sbjct: 398 ACRNVLCDGMVFNTGDDCIAIKSGKD-LDTGYG-PAQNHVVQNCTMNSGHGGITLGSEMG 455
Query: 292 GGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG 344
GGVEN+ A ++ + N + + I +KTN+ RGGF+RN V V + N G+ + G
Sbjct: 456 GGVENIYARNLTMLNQFWATNSLNIAIRIKTNMNRGGFVRNFYVDGVSLPN---GVSLTG 512
>gi|340347489|ref|ZP_08670597.1| exo-poly-alpha-D-galacturonosidase [Prevotella dentalis DSM 3688]
gi|433653517|ref|YP_007297371.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
gi|339609185|gb|EGQ14060.1| exo-poly-alpha-D-galacturonosidase [Prevotella dentalis DSM 3688]
gi|433304050|gb|AGB29865.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
Length = 472
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 157/338 (46%), Gaps = 53/338 (15%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+S+ D+G VGDG T+NT+AF +A+ L + GG L VP G++LTG L ++ L+L
Sbjct: 51 VSLKDYGAVGDGLTMNTRAFAKAM---ADLAKRGGGHLNVPAGIWLTGPIVLKDNIDLHL 107
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
+ A+I + D ++ L A + + + + ++ +TGE G IDG G
Sbjct: 108 DRNALILFSPDKRDF-LTAT--------DGKAAKVVPCLSASKRSNIAVTGE-GIIDGNG 157
Query: 159 AIW------------WNMWRQRT----------LPF-----------------TRPNLIE 179
W WN +R PF R +L+
Sbjct: 158 EYWRPVKRSKVSDTEWNQYRAMGGTVTAKGDLWYPFGLKHEPDVAEDHEAQERMRQHLVR 217
Query: 180 FMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIE 239
F + R +++ V +N+P +++ P C++V++ +T+ P ++ N D ID + NV I
Sbjct: 218 FTDCRRVLVQGVTLRNAPRFHLVPQRCTDVIVDGITVACPWNAQNGDAIDIGNCRNVLIV 277
Query: 240 DSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLA 299
++ I+ GDD + +K G G A G P I I+ G +GSE SGG+ N+
Sbjct: 278 NNTINAGDDGICMKGGAGAKGAADG-PCENINIQDNRVYHAHGGFVIGSEFSGGMNNIYV 336
Query: 300 EHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 337
G+ K+ GRGG R+I +S +YM + +
Sbjct: 337 HRNTFAGTDTGLRFKSATGRGGTTRDIHISQIYMTDIK 374
>gi|2335094|gb|AAC02763.1| putative polygalacturonase [Arabidopsis thaliana]
Length = 426
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 109/372 (29%), Positives = 173/372 (46%), Gaps = 45/372 (12%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPG-VYLTGSFNLT--SHMT 95
+S++DFG GDGKT +T+AF A + +G L VP G YL S LT +
Sbjct: 68 VSVSDFGAKGDGKTDDTQAFVNAWKK--ACSSNGAVNLLVPKGNTYLLKSIQLTGPCNSI 125
Query: 96 LYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITG-ENGTI 154
L + + A+Q ++ I+ +I DG+ ++ + G + G +
Sbjct: 126 LTVQIFGTLSASQKRSDYKDISK-----------------WIMFDGVNNLSVDGGDTGVV 168
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DG G WW Q + + + F NS+S+I+ N+ +N+ I CSNV + V
Sbjct: 169 DGNGETWW----QNSCKRNKAKALTFYNSKSLIVKNLKVRNAQQIQISIEKCSNVQVSNV 224
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
+ APADSPNTDGI ++ N+ + +S I TGDD ++++SG S + I
Sbjct: 225 VVTAPADSPNTDGIHITNTQNIRVSESIIGTGDDCISIESG-----------SQNVQIND 273
Query: 275 VTGSSPFSGIAVGS----ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSD 330
+T P GI++GS + V V + L G+ +KT G G NI +
Sbjct: 274 IT-CGPGHGISIGSLGDDNSKAFVSGVTVDGAKLSGTDNGVRIKTYQGGSGTASNIIFQN 332
Query: 331 VYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL-IQGLKNSPF 389
+ M+N + I I D D +A+ V N + +D+ GT ++ + KN P
Sbjct: 333 IQMDNVKNPIIIDQDYCDKSKCTTEKSAVQVKN-VVYRDISGTSASENAITFNCSKNYPC 391
Query: 390 TGICLSNINLQG 401
GI L +N++G
Sbjct: 392 QGIVLDRVNIKG 403
>gi|317046607|ref|YP_004114255.1| glycoside hydrolase family protein [Pantoea sp. At-9b]
gi|316948224|gb|ADU67699.1| glycoside hydrolase family 28 [Pantoea sp. At-9b]
Length = 443
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 140/299 (46%), Gaps = 19/299 (6%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+S+ DF V DG+TL+T F+ A+ HL + GG L VPPG Y G+ L SH+ L+L
Sbjct: 3 LSLADFHPVADGETLDTACFQRAL---DHLTQRGGGTLTVPPGRYRLGTLTLGSHLKLHL 59
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
A GA + A+Q ++ + + + ++ G +++ I+G+ G IDG G
Sbjct: 60 AAGATLLASQRVEDY-------QHCLAQSQAELSQHVLLYAVGQRNISISGK-GVIDGDG 111
Query: 159 AIWWNMWRQRT---LPF-TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
W+ + LP RP +I F + + + +P W +H V C +V + ++
Sbjct: 112 EAWFAAEKDAQGYRLPRPQRPRIIVFEDCEQVTLQEFTIVQAPMWTVHLVSCRHVHVEHL 171
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
TI PNTD +D DS V + +SY+S DD + +K+ + + I I
Sbjct: 172 TIDNAMTMPNTDALDIDSCEAVFVSNSYLSAADDAICIKTTQKPTHLRRA--ARQIMISN 229
Query: 275 VTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
S +G+ET VE+V +++ I + + GG R + S++ +
Sbjct: 230 CQLRSWSCAFKIGTETFDDVEDVTVSGCTIFDSNRAIGLLSR--DGGSFRRLLFSNLTL 286
>gi|427385675|ref|ZP_18881982.1| hypothetical protein HMPREF9447_03015 [Bacteroides oleiciplenus YIT
12058]
gi|425726714|gb|EKU89577.1| hypothetical protein HMPREF9447_03015 [Bacteroides oleiciplenus YIT
12058]
Length = 532
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 145/319 (45%), Gaps = 32/319 (10%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+S FG V D L+T A ++AI SGG + + PG YLTG+ + S + L +
Sbjct: 84 VSANSFGAVADSTVLSTNAIQKAI---DSCALSGGGTVTLQPGYYLTGALFVKSGVNLQI 140
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYM----SFIHGDGLQDVVITGENGTI 154
+KG + A D + +P R R G M + I+ G + ++GE GT+
Sbjct: 141 SKGVTLIACPDIYCYPEF---------RSRIAGIEMIWPAAVINIIGEKKASVSGE-GTL 190
Query: 155 DGQGAIWWNM-WRQRT------------LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 201
D +G I+W+ W R R I S I +SN + FW
Sbjct: 191 DCRGKIFWDKYWAMRKEYEAKGLRWIVDYDCKRVRGILVERSSDITLSNFTLMRTGFWGC 250
Query: 202 HPVYCSNVVIRYVTILAP--ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEY 259
+Y + + + I P+TDGID DSS+N+ IE+ I DD++ +K+G D
Sbjct: 251 QILYSDHCTVDGLNIDNNIGGHGPSTDGIDIDSSTNILIENCTIDCNDDIICLKAGRDAD 310
Query: 260 GIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 319
G+ + + IR T I GSETSG + N+LA + V +K+ + R
Sbjct: 311 GLRVNRSTENVLIRNCTAHRGAGLITCGSETSGSIRNILAYDLKAIGTSVVFLLKSAMTR 370
Query: 320 GGFIRNITVSDVYMENARK 338
GG + N+ V+ V EN R+
Sbjct: 371 GGTVENVYVTRVEAENVRQ 389
>gi|265755004|ref|ZP_06089918.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|263234615|gb|EEZ20194.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
Length = 497
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 159/368 (43%), Gaps = 46/368 (12%)
Query: 65 IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGR 124
I + + GG + +P G + + L S++ L+LAKGA I+ + ++ LP+
Sbjct: 49 IAEVSKQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFSGRAEDY-----LPAVFT 103
Query: 125 GRERPGGRYM---SFIHGDGLQDVVITGENGTIDG-----------------QGAIWWNM 164
E G M +FI+ +G ++ ITGE GTI G + + W+M
Sbjct: 104 RHE--GVEIMGPAAFIYANGENNIAITGE-GTIYGPSMDAEIRKRPNGASVVEKDVPWDM 160
Query: 165 WRQRTL-------PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL 217
++ + F RP I +N +++I + + S WN+ P+YC NV+IR +T+
Sbjct: 161 PIEQRIYDGMEGRTFYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVN 220
Query: 218 APADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTG 277
+ P+ DGID +S NV IE ++ GDD +K+G E G+ G P+ + IR
Sbjct: 221 S-TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVIIRYSLA 279
Query: 278 SSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 337
GI GSET+G ++N+ GI KT RGG N + M N
Sbjct: 280 QHGHGGITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVG 339
Query: 338 KGIK---------IAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSP 388
K + +P K N P V I IKD Q G+ P
Sbjct: 340 KAFTWDLLGSAYYMGELAARYPARKVN-RLTPNVKNILIKDFIVESADQFFTANGIPEIP 398
Query: 389 FTGICLSN 396
F + + N
Sbjct: 399 FNQVVIEN 406
>gi|388511385|gb|AFK43754.1| unknown [Medicago truncatula]
Length = 400
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 184/418 (44%), Gaps = 54/418 (12%)
Query: 30 VPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPG-------V 82
V +++ ++ D+G VG+GK T+AF +A ++ + + L +P G V
Sbjct: 21 VRLKHIRPSFNVLDYGAVGNGKNDETRAFVDA-WKDTCIAMHESSTLLIPKGKTFMLQPV 79
Query: 83 YLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGL 142
+ G N +S++ + L + + W WP + G ++ FI GL
Sbjct: 80 WFQGPCN-SSNIYVKLEGTIIAPKNIEAWKWP-----------NDNYKGSWIRFIEISGL 127
Query: 143 QDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIH 202
+V G G IDG+GA WW+ P + F ++I+ + NSP +I
Sbjct: 128 --IVYGG--GIIDGKGAQWWDCHSNIKCEKENPTALHFHACENLILRELTHINSPRNHIS 183
Query: 203 PVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA 262
C I + I+AP +SPNTDGID SSN+ IE+S I TGDD +A+
Sbjct: 184 LNACHGSHISKLHIIAPNESPNTDGIDIAESSNIIIENSKIETGDDCIAIN--------- 234
Query: 263 YGHPSSGITIRRVTGSSPFSGIAVGSETSGG----VENVLAEHINLYNVGVGIHVKTNIG 318
H S+ I I + P GI+VGS G VEN + G +KT IG
Sbjct: 235 --HGSNSIYINGIF-CGPGHGISVGSLGRNGVHESVENTYVRNCTFNRTTNGARIKTWIG 291
Query: 319 RGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNP--NALPV-VNGITIKDVWGTKV 375
G+ R +T D+ + A + I D ++NP +A V V+ +T +++ GT +
Sbjct: 292 GNGYARKVTFEDIILIEADNPVII--------DQEYNPYDSAYAVKVSDVTFRNIRGTSI 343
Query: 376 QQSGL-IQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPW-PCSELS 431
+ + + ++ T I L IN+ G C +V+G P+ PC L
Sbjct: 344 AKHAIQLHCDEDITCTNIILEGINITSSIGEEVHA-SCKNVNGVCTSCIPYVPCLSLE 400
>gi|237709329|ref|ZP_04539810.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|229456714|gb|EEO62435.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
Length = 529
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 159/368 (43%), Gaps = 46/368 (12%)
Query: 65 IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGR 124
I + + GG + +P G + + L S++ L+LAKGA I+ + ++ LP+
Sbjct: 81 IAEVSKQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFSGRAEDY-----LPAVFT 135
Query: 125 GRERPGGRYM---SFIHGDGLQDVVITGENGTIDG-----------------QGAIWWNM 164
E G M +FI+ +G ++ ITGE GTI G + + W+M
Sbjct: 136 RHE--GVEIMGPAAFIYANGENNIAITGE-GTIYGPSMDAEIRKRPNGASVVEKDVPWDM 192
Query: 165 WRQRTL-------PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL 217
++ + F RP I +N +++I + + S WN+ P+YC NV+IR +T+
Sbjct: 193 PIEQRIYDGMEGRTFYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVN 252
Query: 218 APADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTG 277
+ P+ DGID +S NV IE ++ GDD +K+G E G+ G P+ + IR
Sbjct: 253 S-TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVIIRYSLA 311
Query: 278 SSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 337
GI GSET+G ++N+ GI KT RGG N + M N
Sbjct: 312 QHGHGGITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVG 371
Query: 338 KGIK---------IAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSP 388
K + +P K N P V I IKD Q G+ P
Sbjct: 372 KAFTWDLLGSAYYMGELAARYPARKVN-RLTPNVKNILIKDFIVESADQFFTANGIPEIP 430
Query: 389 FTGICLSN 396
F + + N
Sbjct: 431 FNQVVIEN 438
>gi|423312679|ref|ZP_17290616.1| hypothetical protein HMPREF1058_01228 [Bacteroides vulgatus
CL09T03C04]
gi|392687413|gb|EIY80706.1| hypothetical protein HMPREF1058_01228 [Bacteroides vulgatus
CL09T03C04]
Length = 594
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 159/368 (43%), Gaps = 46/368 (12%)
Query: 65 IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGR 124
I + + GG + +P G + + L S++ L+LAKGA I+ + ++ LP+
Sbjct: 146 IAEVSKQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFSGCAEDY-----LPAVFT 200
Query: 125 GRERPGGRYM---SFIHGDGLQDVVITGENGTIDG-----------------QGAIWWNM 164
E G M +FI+ +G ++ ITGE GTI G + + W+M
Sbjct: 201 RHE--GVEIMGPAAFIYANGENNIAITGE-GTIYGPPMDAEIRKRPNGASVVEKDVPWDM 257
Query: 165 WRQRTL-------PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL 217
++ + F RP I +N +I+I + + S WN+ P+YC NV+IR +T+
Sbjct: 258 PIEQRIYDGMEGRTFYRPKTISPINCTNILIEGITMERSTLWNVVPIYCENVIIRGITVN 317
Query: 218 APADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTG 277
+ P+ DGID +S NV IE ++ GDD +K+G E G+ G P+ + IR
Sbjct: 318 S-TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVIRYSLA 376
Query: 278 SSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 337
GI GSET+G ++N+ GI KT RGG N + M N
Sbjct: 377 QHGHGGITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVG 436
Query: 338 KGIK---------IAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSP 388
K + +P K N P V I IKD Q G+ P
Sbjct: 437 KAFTWDLLGSAYYMGELAARYPARKVN-RLTPDVKNILIKDFIVESADQFFTANGIPEIP 495
Query: 389 FTGICLSN 396
F + + N
Sbjct: 496 FNQVVVEN 503
>gi|212690918|ref|ZP_03299046.1| hypothetical protein BACDOR_00406 [Bacteroides dorei DSM 17855]
gi|212666150|gb|EEB26722.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 462
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 177/392 (45%), Gaps = 42/392 (10%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
SI D+G V G+T+NT+A +AI ++GG + +P G +LTG + S++ L+L
Sbjct: 52 FSIVDYGAVKGGETVNTEAIAKAI---AACNKAGGGRVVIPEGEWLTGPIHFQSNVNLHL 108
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
+ A+++ T + ++ L A + S+ G E Y ++ +++ ITG+ GT+
Sbjct: 109 EENAILRFTDNPSDY-LPAVMTSW-EGME--CYNYSPLLYAMDCENIAITGK-GTL-API 162
Query: 159 AIWWNMWRQRTLPFT----------------------------RPNLIEFMNSRSIIISN 190
W +W +R P RP+LI F +++++
Sbjct: 163 MDTWKIWFKRPKPHMDALKELYTMASTDVPVEQRQMAKGENHLRPHLIHFNRCKNVLLDE 222
Query: 191 VIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLV 250
+ SPFW IH C ++R + + A N DGID + S N IE+ GDD V
Sbjct: 223 FKIRQSPFWTIHLYMCDGGIVRNLDV--KAHGHNNDGIDLEMSCNFLIENCVFDQGDDAV 280
Query: 251 AVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYN-VGV 309
+K+G ++ P I IR + + +GSE SGGV NV + + V
Sbjct: 281 VIKAGRNQDAWRLNTPCENIVIRHCDILKGHTLLGIGSEMSGGVRNVYMHNCTAPDSVFR 340
Query: 310 GIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKF--NPNALPVVNGITI 367
KTN RGGFI NI + +V ++ +++ DV D +++ +NG+ +
Sbjct: 341 LFFAKTNHRRGGFIENIWMKNVKAGKMQRVLEVDTDVLYQWRDLVPTYQDSITFINGLYM 400
Query: 368 KDVWGTKVQQSGLIQGLKNSPFTGICLSNINL 399
V + + ++G P + + N+ +
Sbjct: 401 DSVTCDRTEAVYDLKGDARLPIKNVEIRNVTV 432
>gi|408501581|ref|YP_006865500.1| pectinesterase [Bifidobacterium asteroides PRL2011]
gi|408466405|gb|AFU71934.1| pectinesterase [Bifidobacterium asteroides PRL2011]
Length = 1519
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/338 (31%), Positives = 153/338 (45%), Gaps = 52/338 (15%)
Query: 30 VPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFN 89
P RY ++ DFG GDG T +T A ++ I + +Y+P G YL+G+ N
Sbjct: 132 TPKRY-----NVRDFGASGDGSTKDTAAIQKTIDACKEKN----CQVYLPAGTYLSGALN 182
Query: 90 LTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGR---YMSFIH-GDGLQDV 145
L S M+ ++ GA +K +++ ++P S E GR Y S ++ G+
Sbjct: 183 LHSDMSFFVDAGAQLKPSRELADYPFT----SARHDIEDVMGRNPAYSSLLNAGEMDSKA 238
Query: 146 VITGENGTIDGQGAIWWN----MWRQRTLPFT---------------RP-------NLIE 179
+T N I G G I + R+ FT +P +LI
Sbjct: 239 GVTTRNIKIMGPGTIGDEANGLLLRKAYDDFTHNGDGGNLDIPSDIYQPGQHVGGGSLIS 298
Query: 180 FMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIE 239
N + + + +N W + PVY ++ + ++ N DG DP+SSSNV I
Sbjct: 299 MKNVGGVYLDGIHIRNGMMWTVVPVYSKDITAYGLQLVTSVH--NGDGFDPNSSSNVWIL 356
Query: 240 DSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLA 299
+ STGDD A+KSG D GIA PS I R +S G+ +GSE SGGV NV
Sbjct: 357 GTSFSTGDDCSAIKSGKDAEGIAIARPSENIYFRGDVFNSGHGGVTIGSEMSGGVRNVFV 416
Query: 300 EHINLYNVGV-------GIHVKTNIGRGGFIRNITVSD 330
E + V + GI VK + RGG++RNI V D
Sbjct: 417 EDSTIVPVDLTSGAVNPGIRVKVSPKRGGYVRNIQVRD 454
>gi|423239876|ref|ZP_17220991.1| hypothetical protein HMPREF1065_01614 [Bacteroides dorei
CL03T12C01]
gi|392644865|gb|EIY38599.1| hypothetical protein HMPREF1065_01614 [Bacteroides dorei
CL03T12C01]
Length = 462
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 177/392 (45%), Gaps = 42/392 (10%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
SI D+G V G+T+NT+A +AI ++GG + +P G +LTG + S++ L+L
Sbjct: 52 FSIVDYGAVKGGETVNTEAIAKAIVACN---KAGGGRVVIPEGEWLTGPIHFQSNVNLHL 108
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
+ A+++ T + ++ L A + S+ G E Y ++ +++ ITG+ GT+
Sbjct: 109 EENAILRFTDNPSDY-LPAVMTSW-EGME--CYNYSPLLYAMDCENIAITGK-GTL-API 162
Query: 159 AIWWNMWRQRTLPFT----------------------------RPNLIEFMNSRSIIISN 190
W +W +R P RP+LI F +++++
Sbjct: 163 MDTWKIWFKRPKPHMDALKELYTMASTDVPVEQRQMAKGENHLRPHLIHFNRCKNVLLDE 222
Query: 191 VIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLV 250
+ SPFW IH C ++R + + A N DGID + S N IE+ GDD V
Sbjct: 223 FKIRQSPFWTIHLYMCDGGIVRNLDV--KAHGHNNDGIDLEMSRNFLIENCVFDQGDDAV 280
Query: 251 AVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYN-VGV 309
+K+G ++ P I IR + + +GSE SGGV NV + + V
Sbjct: 281 VIKAGRNQDAWRLNTPCENIVIRHCDILKGHTLLGIGSEMSGGVRNVYMHNCTAPDSVFR 340
Query: 310 GIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKF--NPNALPVVNGITI 367
KTN RGGFI NI + +V ++ +++ DV D +++ +NG+ +
Sbjct: 341 LFFAKTNHRRGGFIENIWMKNVKAGKMQRVLEVDTDVLYQWRDLVPTYQDSITFINGLYM 400
Query: 368 KDVWGTKVQQSGLIQGLKNSPFTGICLSNINL 399
V + + ++G P + + N+ +
Sbjct: 401 DSVTCDRTEAVYDLKGDARLPIKNVEIRNVTV 432
>gi|449446684|ref|XP_004141101.1| PREDICTED: polygalacturonase At1g48100-like [Cucumis sativus]
gi|449489467|ref|XP_004158321.1| PREDICTED: polygalacturonase At1g48100-like [Cucumis sativus]
Length = 477
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 181/393 (46%), Gaps = 57/393 (14%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGV-YLTGSFNLTSHMT-- 95
++ DFG GDG+T +TKAF+ A ++ G+++ VP G +L G + +
Sbjct: 85 FNVLDFGAKGDGETDDTKAFQSAWESACNVE---GSVVEVPSGSEFLVGPISFSGPNCQP 141
Query: 96 --LYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGT 153
++ G +I T + ++G G + +I L+ + + G GT
Sbjct: 142 NIMFQLDGKIIAPTSPS----------AWGSG-------MLQWIEFTKLKGITVKG-TGT 183
Query: 154 IDGQGAIWWN-----------MWRQRT---LPFTRPNLIEFMNSRSIIISNVIFQNSPFW 199
IDGQG++WWN + ++ + LP T+P + F S + +S + QNS
Sbjct: 184 IDGQGSVWWNDSPTDNPTDKNLDKESSGGELPSTKPTALRFYGSDEVTVSGITIQNSQKA 243
Query: 200 NIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEY 259
++ C+ V + +TI +P DSPNTDGI +S NV I +S I+ GDD +++++G
Sbjct: 244 HLKFDSCTAVQVSSLTISSPGDSPNTDGIHLQNSQNVIISNSNIACGDDCISIQTG---- 299
Query: 260 GIAYGHPSSGITIRRVTGSSPFSGIAVG----SETSGGVENVLAEHINLYNVGVGIHVKT 315
SSG+ I V P GI++G +T V NV + L N G+ +KT
Sbjct: 300 -------SSGVYIHNVN-CGPGHGISIGGLGRDDTKACVSNVTVRDVKLQNTMNGVRIKT 351
Query: 316 NIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKV 375
G G ++ I S++ + + + I I D N ++ ++G+ ++ GT
Sbjct: 352 WQGGSGLVQGILFSNIQVTDVQTPIMIDQYYCD-GGRCHNGSSAVAISGVNYVNIRGTYT 410
Query: 376 QQSGLIQGLKNSPFTGICLSNINLQGVAGPTSP 408
+ P TG+ L I L+G +G P
Sbjct: 411 STPVHFACSDSLPCTGVTLDTIQLEGSSGSNEP 443
>gi|357462815|ref|XP_003601689.1| hypothetical protein MTR_3g084360 [Medicago truncatula]
gi|355490737|gb|AES71940.1| hypothetical protein MTR_3g084360 [Medicago truncatula]
Length = 400
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 125/444 (28%), Positives = 188/444 (42%), Gaps = 65/444 (14%)
Query: 1 MFRFLVTLSILLSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFRE 60
+ L +S+ +S +CF L + P+ ++ ++ ++G GD T ++ AF +
Sbjct: 3 LLFVLYLMSLFVSPISCFRLVNRK------PLAQKS--FNVVNYGAKGDSNTDDSNAFLK 54
Query: 61 AIYRIQHLRRSGGTLLYVPPG----VYLTGSFN--LTSHMTLYLAKGAVIK-ATQDTWNW 113
A + + GT + PG + SF S + G +I + W W
Sbjct: 55 AWQEV--CGSTQGTPTLIIPGGKKFMLQPSSFQGPCKSSTVKVMMMGTIIAPQSSGKWKW 112
Query: 114 PLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFT 173
R ++SF H GL +I+GE GT DGQGA WW +
Sbjct: 113 ------------DSRDDDAWISFSHIKGL---IISGE-GTFDGQGASWWKNYNDHG---- 152
Query: 174 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 233
RP ++F+ ++ + + +SP +I V C+ +I ++ I+AP +SPNTDGID S
Sbjct: 153 RPTALQFLGCDNLKLGPLRHIDSPKNHISIVDCNGALISHLHIIAPENSPNTDGIDISRS 212
Query: 234 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 293
+N+ IE S ISTGDD +A+ SG S I I + P GI+VGS G
Sbjct: 213 TNIIIEHSTISTGDDCIAINSG-----------SKFINITAIN-CGPGHGISVGSLGKDG 260
Query: 294 ----VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDH 349
VE V H G +KT G+ R IT D+ + I I D
Sbjct: 261 KYATVEEVHVSHSIFTGTENGARIKTWTAGTGYARKITYEDITLIKVNNPIII-----DQ 315
Query: 350 PDDKFNPNALPVVNGITIKDV-----WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 404
D + V G+ + DV GT ++ + T I L NIN+ G+ G
Sbjct: 316 HYDALESVSDSVRKGVKVSDVTFRGFRGTANEKDAIELNCARIGCTNIVLENINIAGLGG 375
Query: 405 PTSPPLKCSDVSGSAYQVKP-WPC 427
P C++V GS P PC
Sbjct: 376 E-KPSASCNNVQGSCSSCNPNVPC 398
>gi|373956691|ref|ZP_09616651.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373893291|gb|EHQ29188.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 474
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 122/451 (27%), Positives = 194/451 (43%), Gaps = 60/451 (13%)
Query: 4 FLVTLSILLSYFNCFSLASV----VTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFR 59
F + +I L+ C V G M + + +G V +G TLNT A +
Sbjct: 7 FFICTAIFLTLNFCAKAIDADPAWVKLVGSKKMPAKTTVFKVLAYGAVNNGTTLNTSAIQ 66
Query: 60 EAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPL 119
+AI GG ++ PG YLTGS L ++ L + KG + +Q+ L
Sbjct: 67 KAI---DACSAKGGGIVSFAPGKYLTGSIFLKKNVRLQIDKGVELLGSQN---------L 114
Query: 120 PSYGRGRERPGGRYM----SFIHGDGLQDVVITGENGTIDGQGAIWWNM-WRQRT----- 169
Y + R G M + I+ ++V +TGE G ++ QG +W+ W R
Sbjct: 115 DDYPQMDTRIAGIEMKWPAALINIIDQENVAVTGE-GLVNAQGKPFWDKYWNMRKEYDPK 173
Query: 170 -------LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS 222
RP + S +I I + Q + FW + +Y V + + + D
Sbjct: 174 GLRWIVDYDAQRPRTLLISGSSNITIKAITLQQAGFWTVQVLYSKYVTVDGIIVRNNIDG 233
Query: 223 --PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP 280
P+TDGID DSS+ V I++ I DD +K+G D G+ P+ + IR +
Sbjct: 234 HGPSTDGIDVDSSTYVLIQNCDIDCNDDDFCLKAGRDWDGLRVNKPTEYVVIRYCISRAG 293
Query: 281 FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 340
+ +GSETSGG+ +VLA +++ G G+++K+ RGG + +I ++ M N I
Sbjct: 294 GGLLTLGSETSGGIRHVLATNLSGNGTGNGLNIKSATTRGGTVEDIHFKNITMNNIGNAI 353
Query: 341 KI------AGDVGDHPD-----------DKFNPNALPVVNGI-TIKDVWGTKVQQSGLIQ 382
+I A PD K + P GI T KDV+ + + G +
Sbjct: 354 QITMNWNPAYSYSKLPDGYDINTVPAHWKKMLTHVEPAEKGIPTFKDVYISNINIKGAKK 413
Query: 383 -----GLKNSPFTGICLSNINLQG-VAGPTS 407
G++ P G SN+N++ VAG S
Sbjct: 414 AINAVGMQGHPLVGFHFSNVNIEANVAGDIS 444
>gi|329955387|ref|ZP_08296295.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328525790|gb|EGF52814.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 432
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 139/276 (50%), Gaps = 24/276 (8%)
Query: 29 IVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSF 88
IV + K +ITD+G V D L T+ + I R R+GG ++ VP G +L+GS
Sbjct: 37 IVNIETLGQKYTITDYGVVNDSTILQTEKIQAVIDRAA---RNGGGVIVVPKGTFLSGSI 93
Query: 89 NLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVIT 148
LY+ +G+V+K + D N+ ++ R + + + ++ D + I+
Sbjct: 94 FFKPRTHLYMEEGSVLKGSDDISNFAIVNT-----RIEGQSLKYFAALVNADKVNGFTIS 148
Query: 149 GENGTIDGQGAIWW-NMW-RQRTLPFT------RPNLIEFMNSRSIIISNVIFQNSPFWN 200
G+ GTI+G G +W + W R++ +P RP L+ NS + IS V NSPFW
Sbjct: 149 GK-GTINGNGHRYWKSFWLRRQVIPKCTNMDELRPRLLYISNSNDVQISGVRLMNSPFWT 207
Query: 201 IHPVYCSNVVIRYVTILAPA---DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSG-- 255
H C+N+ + + I APA +P++D ID D SNV +++ Y+S DD VA+K G
Sbjct: 208 THIYRCNNIKLLNLHIFAPAAPVKAPSSDAIDIDVCSNVLVKNCYMSVNDDAVALKGGKG 267
Query: 256 -WDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 290
W + G ++ I I T SG+ GSE+
Sbjct: 268 PWADKDANNG-SNTNIIIEDCTYGFCHSGLTCGSES 302
>gi|237712598|ref|ZP_04543079.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|423229037|ref|ZP_17215442.1| hypothetical protein HMPREF1063_01262 [Bacteroides dorei
CL02T00C15]
gi|423244877|ref|ZP_17225951.1| hypothetical protein HMPREF1064_02157 [Bacteroides dorei
CL02T12C06]
gi|229453919|gb|EEO59640.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|392634790|gb|EIY28702.1| hypothetical protein HMPREF1063_01262 [Bacteroides dorei
CL02T00C15]
gi|392640918|gb|EIY34709.1| hypothetical protein HMPREF1064_02157 [Bacteroides dorei
CL02T12C06]
Length = 462
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 177/392 (45%), Gaps = 42/392 (10%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
SI D+G V G+T+NT+A +AI ++GG + +P G +LTG + S++ L+L
Sbjct: 52 FSIVDYGAVKGGETVNTEAIAKAI---AACNKAGGGRVVIPEGEWLTGPIHFQSNVNLHL 108
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
+ A+++ T + ++ L A + S+ G E Y ++ +++ ITG+ GT+
Sbjct: 109 EENAILRFTDNPSDY-LPAVMTSW-EGME--CYNYSPLLYAMDCENIAITGK-GTL-API 162
Query: 159 AIWWNMWRQRTLPFT----------------------------RPNLIEFMNSRSIIISN 190
W +W +R P RP+LI F +++++
Sbjct: 163 MDTWKIWFKRPKPHMDALKELYTMASTDVPVEQRQMAKGENHLRPHLIHFNRCKNVLLDE 222
Query: 191 VIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLV 250
+ SPFW IH C ++R + + A N DGID + S N IE+ GDD V
Sbjct: 223 FKIRQSPFWTIHLYMCDGGIVRNLDV--KAHGHNNDGIDLEMSCNFLIENCVFDQGDDAV 280
Query: 251 AVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYN-VGV 309
+K+G ++ P I IR + + +GSE SGGV NV + + V
Sbjct: 281 VIKAGRNQDAWRLNTPCENIVIRHCDILKGHTLLGIGSEMSGGVRNVYMHNCTAPDSVFR 340
Query: 310 GIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKF--NPNALPVVNGITI 367
KTN RGGFI NI + +V ++ +++ DV D +++ +NG+ +
Sbjct: 341 LFFAKTNHRRGGFIENIWMKNVKAGKMQRVLEVDTDVLYQWRDLVPTYQDSITFINGLYM 400
Query: 368 KDVWGTKVQQSGLIQGLKNSPFTGICLSNINL 399
V + + ++G P + + N+ +
Sbjct: 401 DSVTCDRTEAVYDLKGDARLPIKNVEIRNVTV 432
>gi|294776431|ref|ZP_06741909.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294449757|gb|EFG18279.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 424
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 177/392 (45%), Gaps = 42/392 (10%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
SI D+G V G+T+NT+A +AI ++GG + +P G +LTG + S++ L+L
Sbjct: 14 FSIVDYGAVKGGETVNTEAIAKAIAACN---KAGGGRVVIPEGEWLTGPVHFKSNVNLHL 70
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
+ A+++ T + ++ L A + S+ G E Y ++ +++ ITG+ GT+
Sbjct: 71 EENAILRFTDNPSDY-LPAVMTSW-EGME--CYNYSPLLYAMDCENIAITGK-GTL-API 124
Query: 159 AIWWNMWRQRTLPFT----------------------------RPNLIEFMNSRSIIISN 190
W +W +R P RP+LI F +++++
Sbjct: 125 MDTWKIWFKRPKPHMDALKELYTMASTDVPVEQRQMAKGENHLRPHLIHFNRCKNVLLDE 184
Query: 191 VIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLV 250
+ SPFW IH C ++R + + A N DGID + S N IE+ GDD V
Sbjct: 185 FKIRQSPFWTIHLYMCDGGIVRNLDV--KAHGHNNDGIDLEMSRNFLIENCVFDQGDDAV 242
Query: 251 AVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYN-VGV 309
+K+G ++ P I IR + + +GSE SGGV NV + + V
Sbjct: 243 VIKAGRNQNAWRLNTPCENIVIRHCNILKGHTLLGIGSEMSGGVRNVYMHNCTAPDSVFR 302
Query: 310 GIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKF--NPNALPVVNGITI 367
KTN RGGFI NI + +V ++ +++ DV D +++ +NG+ +
Sbjct: 303 LFFAKTNHRRGGFIENIWMKNVKAGKMQRVLEVDTDVLYQWRDLVPTYQDSITFINGLYM 362
Query: 368 KDVWGTKVQQSGLIQGLKNSPFTGICLSNINL 399
V + + ++G P + + N+ +
Sbjct: 363 DSVTCDRTEAVYDLKGDARLPIKNVEIRNVTV 394
>gi|150002759|ref|YP_001297503.1| polygalacturonase [Bacteroides vulgatus ATCC 8482]
gi|149931183|gb|ABR37881.1| glycoside hydrolase family 28, candidate polygalacturonase
[Bacteroides vulgatus ATCC 8482]
Length = 462
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 177/392 (45%), Gaps = 42/392 (10%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
SI D+G V G+T+NT+A +AI ++GG + +P G +LTG + S++ L+L
Sbjct: 52 FSIVDYGAVKGGETVNTEAIAKAI---AACNKAGGGRVVIPEGEWLTGPVHFKSNVNLHL 108
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
+ A+++ T + ++ L A + S+ G E Y ++ +++ ITG+ GT+
Sbjct: 109 EENAILRFTDNPSDY-LPAVMTSW-EGME--CYNYSPLLYAMDCENIAITGK-GTL-API 162
Query: 159 AIWWNMWRQRTLPFT----------------------------RPNLIEFMNSRSIIISN 190
W +W +R P RP+LI F +++++
Sbjct: 163 MDTWKIWFKRPKPHMDALKELYTMASTDVPVEQRQMAKGENHLRPHLIHFNRCKNVLLDE 222
Query: 191 VIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLV 250
+ SPFW IH C ++R + + A N DGID + S N IE+ GDD V
Sbjct: 223 FKIRQSPFWTIHLYMCDGGIVRNLDV--KAHGHNNDGIDLEMSRNFLIENCVFDQGDDAV 280
Query: 251 AVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYN-VGV 309
+K+G ++ P I IR + + +GSE SGGV NV + + V
Sbjct: 281 VIKAGRNQDAWRLNTPCENIVIRHCNILKGHTLLGIGSEMSGGVRNVYMHNCTAPDSVFR 340
Query: 310 GIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKF--NPNALPVVNGITI 367
KTN RGGFI NI + +V ++ +++ DV D +++ +NG+ +
Sbjct: 341 LFFAKTNHRRGGFIENIWMKNVKAGKMQRVLEVDTDVLYQWRDLVPTYQDSITFINGLYM 400
Query: 368 KDVWGTKVQQSGLIQGLKNSPFTGICLSNINL 399
V + + ++G P + + N+ +
Sbjct: 401 DSVTCDRTEAVYDLKGDARLPIKNVEIRNVTV 432
>gi|265752277|ref|ZP_06088070.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|263237069|gb|EEZ22539.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
Length = 462
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 177/392 (45%), Gaps = 42/392 (10%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
SI D+G V G+T+NT+A +AI ++GG + +P G +LTG + S++ L+L
Sbjct: 52 FSIVDYGAVKGGETVNTEAIAKAI---AACNKAGGGRVVIPEGEWLTGPVHFQSNVNLHL 108
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
+ A+++ T + ++ L A + S+ G E Y ++ +++ ITG+ GT+
Sbjct: 109 EENAILRFTDNPSDY-LPAVMTSW-EGME--CYNYSPLLYAMDCENIAITGK-GTL-API 162
Query: 159 AIWWNMWRQRTLPFT----------------------------RPNLIEFMNSRSIIISN 190
W +W +R P RP+LI F +++++
Sbjct: 163 MDTWKIWFKRPKPHMDALKELYTMASTDVPVEQRQMAKGENHLRPHLIHFNRCKNVLLDE 222
Query: 191 VIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLV 250
+ SPFW IH C ++R + + A N DGID + S N IE+ GDD V
Sbjct: 223 FKIRQSPFWTIHLYMCDGGIVRNLDV--KAHGHNNDGIDLEMSCNFLIENCVFDQGDDAV 280
Query: 251 AVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYN-VGV 309
+K+G ++ P I IR + + +GSE SGGV NV + + V
Sbjct: 281 VIKAGRNQDAWRLNTPCENIVIRHCDILKGHTLLGIGSEMSGGVRNVYMHNCTAPDSVFR 340
Query: 310 GIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKF--NPNALPVVNGITI 367
KTN RGGFI NI + +V ++ +++ DV D +++ +NG+ +
Sbjct: 341 LFFAKTNHRRGGFIENIWMKNVKAGKMQRVLEVDTDVLYQWRDLVPTYQDSITFINGLYM 400
Query: 368 KDVWGTKVQQSGLIQGLKNSPFTGICLSNINL 399
V + + ++G P + + N+ +
Sbjct: 401 DSVTCDRTEAVYDLKGDARLPIKNVEIRNVTV 432
>gi|294776865|ref|ZP_06742328.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294449341|gb|EFG17878.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 594
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 158/368 (42%), Gaps = 46/368 (12%)
Query: 65 IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGR 124
I + + GG + +P G + + L S++ L+LAKGA I+ ++ LP+
Sbjct: 146 IAEVSKQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFAGRAEDY-----LPAVFT 200
Query: 125 GRERPGGRYM---SFIHGDGLQDVVITGENGTIDG-----------------QGAIWWNM 164
E G M +FI+ +G ++ ITGE GTI G + + W+M
Sbjct: 201 RHE--GVEIMGPAAFIYANGENNIAITGE-GTIYGPPMDAEIRKRPNGASVVEKDVPWDM 257
Query: 165 WRQRTL-------PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL 217
++ + F RP I +N +++I + + S WN+ P+YC NV+IR +T+
Sbjct: 258 PIEQRIYDGMEGRTFYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVN 317
Query: 218 APADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTG 277
+ P+ DGID +S NV IE ++ GDD +K+G E G+ G P+ + IR
Sbjct: 318 S-TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVIRYSLA 376
Query: 278 SSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 337
GI GSET+G ++N+ GI KT RGG N + M N
Sbjct: 377 QHGHGGITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVG 436
Query: 338 KGIK---------IAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSP 388
K + +P K N P V I IKD Q G+ P
Sbjct: 437 KAFTWDLLGSAYYMGELAARYPARKVN-RLTPDVKNILIKDFIVESADQFFTANGIPEIP 495
Query: 389 FTGICLSN 396
F + + N
Sbjct: 496 FNQVVVEN 503
>gi|225442916|ref|XP_002265133.1| PREDICTED: probable polygalacturonase At3g15720-like [Vitis
vinifera]
Length = 374
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 111/391 (28%), Positives = 186/391 (47%), Gaps = 40/391 (10%)
Query: 40 SITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLA 99
++ +G VG+GKT ++KAF +A + H +S L +PP +L +
Sbjct: 11 NVVSYGAVGNGKTDDSKAFMKAWSAVCH-GQSHDAHLIIPPKTFLLKPVKFS-------- 61
Query: 100 KGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGA 159
KA++ T ++ L + R G ++ F GL + G+ G+IDG+G+
Sbjct: 62 --GPCKASRITVQ--VLGKLVASTNKRAFNGNYWLLFHKVKGL---TLWGK-GSIDGKGS 113
Query: 160 IWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP 219
WW +Q F RP ++F +++ + NS +I C +I + ++AP
Sbjct: 114 AWW---QQHDSDF-RPAALKFYECPGMVLKGLTHLNSQKQHIVITKCHGALISKIKVIAP 169
Query: 220 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS 279
DSPNTDGI+ SS NV ++ S+ISTGDD +A+ +G SS I I+ +T +
Sbjct: 170 EDSPNTDGINIASSKNVRVQRSHISTGDDCIAISAG-----------SSNIKIKGMT-CA 217
Query: 280 PFSGIAVGSETSGG-----VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYME 334
P GI++G+ G VE V G+G+ +KT G G +RNI+ ++ ++
Sbjct: 218 PSHGISIGALGDPGKPDESVEKVDVSDCTFKGPGIGVRIKTWQGGRGRVRNISYKNIEVQ 277
Query: 335 NARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGIC 393
I I K N +A+ V + ++ + GT + + + +N+ T I
Sbjct: 278 EVGTPIVIDQFYCPRGGCKNNSDAVRVSD-VSYSGIRGTYTRDDAMSLLCSQNAACTNIV 336
Query: 394 LSNINLQGVAGPTSPPLKCSDVSGSAYQVKP 424
L NINL+ + + +KC +V G + VKP
Sbjct: 337 LDNINLRTMDPKKAAKVKCFNVKGRSQDVKP 367
>gi|319643181|ref|ZP_07997809.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345520529|ref|ZP_08799916.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|423315312|ref|ZP_17293242.1| hypothetical protein HMPREF1058_03854 [Bacteroides vulgatus
CL09T03C04]
gi|423315336|ref|ZP_17293266.1| hypothetical protein HMPREF1058_03878 [Bacteroides vulgatus
CL09T03C04]
gi|254835049|gb|EET15358.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|317385085|gb|EFV66036.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|392679549|gb|EIY72930.1| hypothetical protein HMPREF1058_03854 [Bacteroides vulgatus
CL09T03C04]
gi|392679573|gb|EIY72954.1| hypothetical protein HMPREF1058_03878 [Bacteroides vulgatus
CL09T03C04]
Length = 462
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 177/392 (45%), Gaps = 42/392 (10%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
SI D+G V G+T+NT+A +AI ++GG + +P G +LTG + S++ L+L
Sbjct: 52 FSIVDYGAVKGGETVNTEAIAKAI---AACNKAGGGRVVIPEGEWLTGPVHFKSNVNLHL 108
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
+ A+++ T + ++ L A + S+ G E Y ++ +++ ITG+ GT+
Sbjct: 109 EENAILRFTDNPSDY-LPAVMTSW-EGME--CYNYSPLLYAMDCENIAITGK-GTL-API 162
Query: 159 AIWWNMWRQRTLPFT----------------------------RPNLIEFMNSRSIIISN 190
W +W +R P RP+LI F +++++
Sbjct: 163 MDTWKIWFKRPKPHMDALKELYTMASTDVPVEQRQMAKGENHLRPHLIHFNRCKNVLLDE 222
Query: 191 VIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLV 250
+ SPFW IH C ++R + + A N DGID + S N IE+ GDD V
Sbjct: 223 FKIRQSPFWTIHLYMCDGGIVRNLDV--KAHGHNNDGIDLEMSRNFLIENCVFDQGDDAV 280
Query: 251 AVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYN-VGV 309
+K+G ++ P I IR + + +GSE SGGV NV + + V
Sbjct: 281 VIKAGRNQDAWRLNTPCENIVIRHCDILKGHTLLGIGSEMSGGVRNVYMHNCTAPDSVFR 340
Query: 310 GIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKF--NPNALPVVNGITI 367
KTN RGGFI NI + +V ++ +++ DV D +++ +NG+ +
Sbjct: 341 LFFAKTNHRRGGFIENIWMKNVKAGKMQRVLEVDTDVLYQWRDLVPTYQDSITFINGLYM 400
Query: 368 KDVWGTKVQQSGLIQGLKNSPFTGICLSNINL 399
V + + ++G P + + N+ +
Sbjct: 401 DSVTCDRTEAVYDLKGDARLPIKNVEIRNVTV 432
>gi|325299780|ref|YP_004259697.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319333|gb|ADY37224.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 461
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 144/319 (45%), Gaps = 44/319 (13%)
Query: 58 FREAIYR-IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLI 116
+ EAI R I GG + +P G Y T L S++ L+L+ V++ D +P +
Sbjct: 62 YTEAISRAIDTCSAQGGGTVLIPNGTYRTAPIRLKSNVNLHLSDSTVLQFVTDPALFPTV 121
Query: 117 APLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAI--WWNMWR-------- 166
R I+ G ++ +TG+ G +DGQ W++ R
Sbjct: 122 -----LTRIEGIDCHNVSPLIYAYGETNIALTGK-GILDGQADTSNWFSPARLKSIDENG 175
Query: 167 ----QRTLPFT-------------------RPNLIEFMNSRSIIISNVIFQNSPFWNIHP 203
++TL + RP I ++I++ SPFW IHP
Sbjct: 176 KEINEKTLLYQMMKDSIPASRRVFAGEKGIRPQFINLYKCKNILLEGFTLHRSPFWLIHP 235
Query: 204 VYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAY 263
+ N+ +R V + + N DG DP+S NV I+ TGDD +A+KSG DE G +
Sbjct: 236 LLSENITVRKVIL--QSHGRNNDGCDPESCKNVLIDSCSFDTGDDCIAIKSGRDEDGRYW 293
Query: 264 GHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVG--IHVKTNIGRGG 321
PS I +R +G+A+GSE +GG +NV E+ + + + I +K+N RGG
Sbjct: 294 NIPSENIIVRNCLMKDGHAGVAIGSEITGGCQNVWVENCRMDSPELDRIIRIKSNSERGG 353
Query: 322 FIRNITVSDVYMENARKGI 340
++NI V D+ + ++ I
Sbjct: 354 EVKNIFVRDITVGECKESI 372
>gi|254392542|ref|ZP_05007720.1| glycoside hydrolase [Streptomyces clavuligerus ATCC 27064]
gi|197706207|gb|EDY52019.1| glycoside hydrolase [Streptomyces clavuligerus ATCC 27064]
Length = 380
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 145/322 (45%), Gaps = 64/322 (19%)
Query: 133 YMSFIHGDGLQDVVITGENGTIDGQG--AIWWNMWRQRTLP------------------- 171
Y F++ + V +TGE G +DGQ W + +R TL
Sbjct: 56 YSPFVYAHNQRGVAVTGE-GILDGQARRGPWESWYRTGTLQGPDQRLLRKMGSEGVPVKD 114
Query: 172 -------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 224
+ RP +++F R ++IS++ + P W +HPV C+NV +R +T+ + N
Sbjct: 115 RLFGAGHYLRPKMVQFNRCRDVLISDLTIVDPPMWTVHPVLCTNVTVRNITVESLLH--N 172
Query: 225 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 284
TDG+DP++S V I +T DD VAVK+G DE G G PS I ++ S + GI
Sbjct: 173 TDGVDPEASRLVHITGCRFNTNDDCVAVKAGRDEDGHRVGVPSEDIVVQDCDFSGRWGGI 232
Query: 285 AVGSETSGGVENVLAEHINL--------YNVGVGIHVKTNIGRGGFIRNITVSDVYMENA 336
VGSE SGGV V AE + Y V +++K + RGGF+ + V +
Sbjct: 233 TVGSEMSGGVRRVFAEDCRINPPDFPGHYPVKYPVYLKASKKRGGFVDGVYVRRFSGQAV 292
Query: 337 RKGIKI------AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL-----IQGLK 385
+ + G+ G HP ++++D+ + + G + GL+
Sbjct: 293 EREVLFVNMDYNGGEGGTHP--------------VSVRDIHLSHCRIDGARAVLRLVGLE 338
Query: 386 NSPFTGICLSNINLQGVAGPTS 407
G+ L++ + GV GP +
Sbjct: 339 TDRLRGVHLAHCDFTGVRGPDA 360
>gi|345512498|ref|ZP_08792024.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|229435434|gb|EEO45511.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
Length = 462
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 178/392 (45%), Gaps = 42/392 (10%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
SI D+G V G+T+NT+A +AI ++GG + +P G +LTG + S++ L+L
Sbjct: 52 FSIVDYGAVKGGETVNTEAIAKAI---AACNKAGGGRVVIPEGEWLTGPVHFQSNVNLHL 108
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
+ A+++ T + ++ L A + S+ G E Y ++ +++ ITG+ GT+
Sbjct: 109 EENAILRFTDNPSDY-LPAVMTSW-EGME--CYNYSPLLYAMDCENIAITGK-GTL-API 162
Query: 159 AIWWNMWRQRTLPFT----------------------------RPNLIEFMNSRSIIISN 190
W +W +R P RP+LI F +++++
Sbjct: 163 MDTWKIWFKRPKPHMDALKELYTMASTDVPVEQRQMAKGENHLRPHLIHFNRCKNVLLDE 222
Query: 191 VIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLV 250
+ SPFW +H C ++R + + A N DGID + S N IE+ GDD V
Sbjct: 223 FKIRQSPFWTVHLYMCDGGIVRNLDV--KAHGHNNDGIDLEMSRNFLIENCVFDQGDDAV 280
Query: 251 AVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYN-VGV 309
+K+G ++ P I +R + + +GSE SGGV NV + + V
Sbjct: 281 VIKAGRNQDAWRLNTPCENIVVRHCNILKGHTLLGIGSEMSGGVRNVYMHNCTAPDSVFR 340
Query: 310 GIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKF--NPNALPVVNGITI 367
KTN RGGFI NI + +V ++ +++ DV D +++ ++NG+ +
Sbjct: 341 LFFAKTNHRRGGFIENIWMKNVKAGKMQRVLEVDTDVLYQWRDLVPTYQDSITLINGLYM 400
Query: 368 KDVWGTKVQQSGLIQGLKNSPFTGICLSNINL 399
V + + ++G P + + N+ +
Sbjct: 401 DSVTCDRTEAVYDLKGDARLPIKNVEIRNVTV 432
>gi|253688511|ref|YP_003017701.1| glycoside hydrolase family protein [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251755089|gb|ACT13165.1| glycoside hydrolase family 28 [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 437
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 111/392 (28%), Positives = 176/392 (44%), Gaps = 51/392 (13%)
Query: 47 VGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKA 106
V +G L T A + AI ++GG + + GV+ +G L ++ LYLA G+ + A
Sbjct: 29 VSEGIALATSAIQHAI---DQCSQAGGGRVELSAGVWQSGPLLLKDNVELYLAAGSRLTA 85
Query: 107 TQ--DTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAI-WWN 163
+ D + I+ P +FI ++++ I G G IDGQG WW
Sbjct: 86 SYQGDAFKPGFISA----------PAHEGEAFILAKDVKNIAIAGP-GVIDGQGQQRWWP 134
Query: 164 M--------------WRQRTLP-------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIH 202
+ W + P RP LIEF N IS + +NSP WN+
Sbjct: 135 LATEARNHLKHGDTNWFTQHYPGIPTANGMPRPWLIEFANVSQGKISGIGIENSPMWNLV 194
Query: 203 PVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA 262
++ + TI P+DSPNTDGID SS V + ISTGDD ++VKSG + A
Sbjct: 195 IRDSHHIEVTNSTITNPSDSPNTDGIDIISSRQVHLHHLNISTGDDNISVKSGLAKR--A 252
Query: 263 YGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGF 322
S ITI + S GI++GSET G+ V + ++ G+ +K+ RG
Sbjct: 253 DDAESRDITIDHIQ-SENGHGISIGSETINGIGKVTLQDLHFTGTENGVRIKSGRDRGAN 311
Query: 323 IRNITVSDVYMENARKGIKIA---GDVGDHPDDKFNP-------NALPVVNGITIKDVWG 372
I + + +V M+ + + I G G + D +P P ++ +T++ +
Sbjct: 312 IGPVIIRNVTMQQVKTPLVITDSYGGNGGYSSDSVSPIKYQTLTTTTPNIHDVTLQHIEA 371
Query: 373 TKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 404
+ +G+I GL +P I L ++++ G
Sbjct: 372 SGATHAGIISGLPEAPLKNIHLESVHITAKTG 403
>gi|237712634|ref|ZP_04543115.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|423228996|ref|ZP_17215401.1| hypothetical protein HMPREF1063_01221 [Bacteroides dorei
CL02T00C15]
gi|423244835|ref|ZP_17225909.1| hypothetical protein HMPREF1064_02115 [Bacteroides dorei
CL02T12C06]
gi|229453955|gb|EEO59676.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|392634749|gb|EIY28661.1| hypothetical protein HMPREF1063_01221 [Bacteroides dorei
CL02T00C15]
gi|392641222|gb|EIY35006.1| hypothetical protein HMPREF1064_02115 [Bacteroides dorei
CL02T12C06]
Length = 494
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 173/381 (45%), Gaps = 40/381 (10%)
Query: 43 DFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGA 102
D+G D L+T A ++AI RSGG + V PG Y G+ L S++ L+L +G
Sbjct: 59 DYGLKNDSTQLSTAALQKAI---DECHRSGGGTVEVAPGYYRIGAIYLKSNVNLHLNQGT 115
Query: 103 VIKATQDTWNWPLIAPLPSYGRGRERPGGRYM----SFIHGDGLQDVVITGENGTIDGQG 158
+ A++D + Y R R G M + I+ ++ I+G GT+D +G
Sbjct: 116 TLIASED---------IDLYPEMRSRVAGIEMVWPSAVINILDAENAAISGA-GTLDCRG 165
Query: 159 AIWWNMW-------RQRTLPF------TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVY 205
I+W+ + +R L + R + NSR I + + + FW +Y
Sbjct: 166 KIFWDKYWTMRKDYEKRKLRWIVDYDCKRVRGMLISNSRHITLKDFTLMRTGFWGCQVLY 225
Query: 206 CSNVVIRYVTIL--APADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAY 263
+ + I P+TDGID DSS+N+ IE+ + DD + +K+G D G+
Sbjct: 226 SDQCTLNGLKINNNVGGHGPSTDGIDIDSSTNILIENCEVDCNDDNICLKAGRDADGLRV 285
Query: 264 GHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFI 323
P+ I +R I GSETSG + NVL ++ Y + +K+ + RGG +
Sbjct: 286 NRPTENIIVRGCIARKGAGLITCGSETSGCIRNVLGYNLQAYGTSSTLRLKSAMNRGGTV 345
Query: 324 RNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPV-VNGITIKDVWGTKVQQSGLIQ 382
NI ++ V +N R +A D+ +P ++ + LP G I + W KV + +
Sbjct: 346 ENIYMTQVTADNVRH--VLAADLNWNP--SYSYSTLPAEYEGKEIPEHW--KVMLTPVTP 399
Query: 383 GLKNSP-FTGICLSNINLQGV 402
K P F + LS++ V
Sbjct: 400 KEKGYPHFRNVWLSDVKATNV 420
>gi|325298611|ref|YP_004258528.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324318164|gb|ADY36055.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 484
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 178/375 (47%), Gaps = 32/375 (8%)
Query: 43 DFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGA 102
DFG D L+T+A + A+ R+GG ++ + G Y TG+ + + L L KGA
Sbjct: 55 DFGLEQDTTKLSTEAIQRAV---DACSRAGGGIVAIKKGYYRTGALFIKGGVNLRLEKGA 111
Query: 103 VIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWW 162
V+ A++D ++P + G + P G I+ +G+Q+ +TGE GTID +G W
Sbjct: 112 VLIASEDFGDYPERMTRIA-GIEMQWPAG----VINFEGVQNAALTGE-GTIDCRGKFCW 165
Query: 163 NMWRQRTLPFTRPNL-------------IEFMNSRSIIISNVIFQNSPFWNIHPVYCSNV 209
+ + + + L I S+ + + + FW VY +
Sbjct: 166 DKYWTMRKDYVKRGLRWIVDYDAKRIRGIVVSQSKDVTLKGFTLLRTGFWGCQLVYSGHC 225
Query: 210 VIRYVTIL--APADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPS 267
+ + I P+TDGID DSSS++ IE++YI DD + +K+G D G+ P+
Sbjct: 226 TVDGIRINNNLGGHGPSTDGIDVDSSSDILIENAYIDCNDDNICLKAGRDADGLRVNRPT 285
Query: 268 SGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 327
+ IR + + +GSETSGG+ NVLA + + +K+ + RGG + +I
Sbjct: 286 ERVVIRNCIAAKGGGLVTIGSETSGGIRNVLAYDLESKGTSTMLRLKSAMNRGGTVEHIY 345
Query: 328 VSDVYMENARKGIKIAGDVGDHPDDKFNPNALP-VVNGITIKDVWGTKVQQSGLIQGLKN 386
V+ E+ + + D+ +P ++ + LP G I + W KV + ++ K
Sbjct: 346 VTRCKGEDVKN--VLVADLNWNP--SYSYSKLPEEYEGKEIPEHW--KVMLAPVVPKEKG 399
Query: 387 SP-FTGICLSNINLQ 400
P F + +S+I+++
Sbjct: 400 YPHFRSVYMSHISVK 414
>gi|212690878|ref|ZP_03299006.1| hypothetical protein BACDOR_00366 [Bacteroides dorei DSM 17855]
gi|265752316|ref|ZP_06088109.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|345512460|ref|ZP_08791986.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|423239837|ref|ZP_17220952.1| hypothetical protein HMPREF1065_01575 [Bacteroides dorei
CL03T12C01]
gi|212666560|gb|EEB27132.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|229438029|gb|EEO48106.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|263237108|gb|EEZ22578.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|392645462|gb|EIY39189.1| hypothetical protein HMPREF1065_01575 [Bacteroides dorei
CL03T12C01]
Length = 494
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 173/381 (45%), Gaps = 40/381 (10%)
Query: 43 DFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGA 102
D+G D L+T A ++AI RSGG + V PG Y G+ L S++ L+L +G
Sbjct: 59 DYGLKNDSTQLSTAALQKAI---DECHRSGGGTVEVAPGYYRIGAIYLKSNVNLHLNQGT 115
Query: 103 VIKATQDTWNWPLIAPLPSYGRGRERPGGRYM----SFIHGDGLQDVVITGENGTIDGQG 158
+ A++D + Y R R G M + I+ ++ I+G GT+D +G
Sbjct: 116 TLIASED---------IDLYPEMRSRVAGIEMVWPSAVINILDAENAAISGA-GTLDCRG 165
Query: 159 AIWWNMW-------RQRTLPF------TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVY 205
I+W+ + +R L + R + NSR I + + + FW +Y
Sbjct: 166 KIFWDKYWTMRKDYEKRKLRWIVDYDCKRVRGMLISNSRHITLKDFTLMRTGFWGCQVLY 225
Query: 206 CSNVVIRYVTIL--APADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAY 263
+ + I P+TDGID DSS+N+ IE+ + DD + +K+G D G+
Sbjct: 226 SDQCTLNGLKINNNVGGHGPSTDGIDIDSSTNILIENCEVDCNDDNICLKAGRDADGLRV 285
Query: 264 GHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFI 323
P+ I +R I GSETSG + NVL ++ Y + +K+ + RGG +
Sbjct: 286 NRPTENIIVRGCIARKGAGLITCGSETSGCIRNVLGYNLQAYGTSSTLRLKSAMNRGGTV 345
Query: 324 RNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPV-VNGITIKDVWGTKVQQSGLIQ 382
NI ++ V +N R +A D+ +P ++ + LP G I + W KV + +
Sbjct: 346 ENIYMTQVTADNVRH--VLAADLNWNP--SYSYSTLPAEYEGKEIPEHW--KVMLTPVTP 399
Query: 383 GLKNSP-FTGICLSNINLQGV 402
K P F + LS++ V
Sbjct: 400 KEKGYPHFRNVWLSDVKATNV 420
>gi|224536009|ref|ZP_03676548.1| hypothetical protein BACCELL_00873 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522376|gb|EEF91481.1| hypothetical protein BACCELL_00873 [Bacteroides cellulosilyticus
DSM 14838]
Length = 459
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 179/400 (44%), Gaps = 42/400 (10%)
Query: 34 YRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSH 93
Y + S+ DFG V G NTK+ AI ++GG + +P G +LTG +L S+
Sbjct: 46 YPDRNFSVVDFGAVKGGIADNTKSITAAI---NACHKAGGGRVVIPEGEWLTGPVHLKSN 102
Query: 94 MTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGT 153
+ LYL++ AV+ T + ++ L A + S+ G E Y ++ G ++V ITG+ G
Sbjct: 103 VNLYLSENAVLCFTDNPSDY-LPAVMTSW-EGME--CYNYSPLVYAVGCENVAITGK-GM 157
Query: 154 IDGQGAIWWNMWRQR------------TLPFT----------------RPNLIEFMNSRS 185
+ + W +W R T+ T RP+LI F R+
Sbjct: 158 LKPKMDTW-KVWFARPEAHLNALKELYTMASTDVPVEKRQMAVGENNLRPHLIHFNRCRN 216
Query: 186 IIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYIST 245
+++ + SPFW IH C + R + + A N DGID + + N +ED
Sbjct: 217 VLLDGFKIRESPFWTIHIYMCDGGIARNLDV--KAHGHNNDGIDLEMTRNFLVEDCTFDQ 274
Query: 246 GDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINL- 304
GDD V +K+G + P+ I IR + + +GSE SGG+ NV +
Sbjct: 275 GDDAVVIKAGRNRDAWRLNIPTENIVIRNCNIVEGHTLLGIGSEISGGIRNVYMHDCKVP 334
Query: 305 YNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKF--NPNALPVV 362
+V VKTN RG F+ NI + ++ + ++ ++I DV D + +
Sbjct: 335 QSVRRLFFVKTNHRRGAFVENIHMENIRAGHVQRVLEIDTDVLYQWKDLVPTYEERITRI 394
Query: 363 NGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 402
+GI +K+V T ++G P + + ++++ V
Sbjct: 395 DGIYMKNVVCTSADAIYELKGDTKLPARNVVIEDVHVNEV 434
>gi|302672206|ref|YP_003832166.1| polygalacturonase Pgl28B [Butyrivibrio proteoclasticus B316]
gi|302396679|gb|ADL35584.1| polygalacturonase Pgl28B [Butyrivibrio proteoclasticus B316]
Length = 519
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 158/340 (46%), Gaps = 44/340 (12%)
Query: 26 CSGIVPMR----YRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPG 81
C G + +R R ++ + + +GDGKTLNT A ++A+ ++++ P G
Sbjct: 81 CLGRITVRTGKVKRKIDVTTSPYNALGDGKTLNTAALQKALDDCDE-----NSIVFFPKG 135
Query: 82 VYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYM----SFI 137
YLTG+ N+ S+ +YL +GA+++ T+D ++ + + S G E R +
Sbjct: 136 TYLTGALNVHSNSEIYLEEGALLQGTEDPADY--LPKIHSRFEGYEMECYRSLLNLGELD 193
Query: 138 HGDGL--QDVVITGENGTIDGQGAIWWNMWR--------------QRTLPFTRPN----- 176
H G ++V+I GE + G A+ ++ R + + +P
Sbjct: 194 HSSGFNCENVIIRGEGSIMGGGAALAKSIARIEGERLRDYIASLGDKIKEYEKPETIASR 253
Query: 177 ----LIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDS 232
LI N ++I I + +P WNIH +Y +V + T L N DG DPDS
Sbjct: 254 FRGRLINMSNCQNIWIHGLTLGFAPSWNIHFIYSDQIVTDHCT-LKSEGVWNGDGWDPDS 312
Query: 233 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF-SGIAVGSETS 291
S+N + T DD VA+KSG + G P+ IR + F G+ +GSE S
Sbjct: 313 STNSTLYACDFYTEDDSVAIKSGKNPEGNVINRPTK--HIRVFDSVTHFGHGLCIGSEMS 370
Query: 292 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDV 331
GGVE+V + GI +K RGG++RNI V D+
Sbjct: 371 GGVEDVRLWDCQMGPTWSGIEIKATKKRGGYVRNILVRDI 410
>gi|380693882|ref|ZP_09858741.1| hypothetical protein BfaeM_07848 [Bacteroides faecis MAJ27]
Length = 454
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 163/376 (43%), Gaps = 57/376 (15%)
Query: 17 CFSLASV-----------VTCSGIVPMR------YRNDKISITDFGGVGDGKTLNTKAFR 59
CF L SV V PM+ Y ITDFG V G+ NT+A
Sbjct: 5 CFGLLSVTMVVAGDHYKTVKVKAPFPMQPIKIFIYPEQDFKITDFGAVPGGEVNNTQAIA 64
Query: 60 EAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPL 119
AI ++GG + VP G +LTG + S++ L L + AV+ T + ++ L A +
Sbjct: 65 AAI---DACNKAGGGRVVVPAGTWLTGPVHFKSNVNLCLEENAVLSFTDNPEDY-LPAVM 120
Query: 120 PSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFT------ 173
S+ G E Y ++ ++V I+G+ GT+ + W +W +R P
Sbjct: 121 TSW-EGLE--CYNYSPLLYAFECENVAISGK-GTLQPKMGTW-KVWFKRPAPHLEALKDL 175
Query: 174 ----------------------RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVI 211
RP+LI F +++++ + SPFW IH C ++
Sbjct: 176 YTKASTNVPVIERQMAVGENHLRPHLIHFNRCKNVMLDGFKIRESPFWTIHLYMCDGGMV 235
Query: 212 RYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGIT 271
R + + A N DGID + S N +ED GDD V +K+G ++ P I
Sbjct: 236 RNLDVRAHGH--NNDGIDFEMSRNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIV 293
Query: 272 IRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYN-VGVGIHVKTNIGRGGFIRNITVSD 330
IR + + +GSE SGG+ N+ N V VKTN RGGFI NI + +
Sbjct: 294 IRNCRILKGHTLLGIGSEISGGIRNIYMHDCTAPNSVMRLFFVKTNHRRGGFIENIYMKN 353
Query: 331 VYMENARKGIKIAGDV 346
V A++ ++I +V
Sbjct: 354 VEAGTAQRVLEIDTEV 369
>gi|221200600|ref|ZP_03573641.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD2M]
gi|221208427|ref|ZP_03581429.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD2]
gi|221171615|gb|EEE04060.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD2]
gi|221179172|gb|EEE11578.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD2M]
Length = 665
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 101/174 (58%), Gaps = 17/174 (9%)
Query: 172 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 231
+ RP ++EF+ ++++ N QN+PFW HP C NVVIR VT + PN DG DPD
Sbjct: 333 YLRPCMVEFIGCTNVLMENYQTQNTPFWQHHPTACRNVVIRGVTTN--SIGPNNDGFDPD 390
Query: 232 SSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 288
+ ++V ED +TGDD +A+KSG + EYG A H +R T +S GI +GS
Sbjct: 391 ACTDVLCEDCTFNTGDDCIAIKSGKNRDTEYGPAKRH-----LVRNCTMNSGHGGITLGS 445
Query: 289 ETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMEN 335
E GGVE + A ++++ N + + I VKTN+ RGG++++ V V + N
Sbjct: 446 EMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVSLPN 499
>gi|161519770|ref|YP_001583197.1| glycoside hydrolase family protein [Burkholderia multivorans ATCC
17616]
gi|189354051|ref|YP_001949678.1| endopolygalacturonase [Burkholderia multivorans ATCC 17616]
gi|160343820|gb|ABX16905.1| glycoside hydrolase family 28 [Burkholderia multivorans ATCC 17616]
gi|189338073|dbj|BAG47142.1| endopolygalacturonase [Burkholderia multivorans ATCC 17616]
Length = 665
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 105/183 (57%), Gaps = 20/183 (10%)
Query: 172 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 231
+ RP ++EF+ ++++ N QN+PFW HP C NVVIR VT + PN DG DPD
Sbjct: 333 YLRPCMVEFIGCTNVLMENYQTQNTPFWQHHPTACRNVVIRGVTTN--SIGPNNDGFDPD 390
Query: 232 SSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 288
+ ++V ED +TGDD +A+KSG + EYG A H +R T +S GI +GS
Sbjct: 391 ACTDVLCEDCTFNTGDDCIAIKSGKNRDTEYGPAKRH-----LVRNCTMNSGHGGITLGS 445
Query: 289 ETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 341
E GGVE + A ++++ N + + I VKTN+ RGG++++ V V + N G+
Sbjct: 446 EMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVSLPN---GVT 502
Query: 342 IAG 344
+ G
Sbjct: 503 LKG 505
>gi|150004323|ref|YP_001299067.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|149932747|gb|ABR39445.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
Length = 594
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 159/368 (43%), Gaps = 46/368 (12%)
Query: 65 IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGR 124
I + + GG + +P G + + L S++ L+LAKGA ++ + ++ LP+
Sbjct: 146 IAEVSKQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAELEFSGCAEDY-----LPAVFT 200
Query: 125 GRERPGGRYM---SFIHGDGLQDVVITGENGTIDG-----------------QGAIWWNM 164
E G M +FI+ +G ++ ITGE GTI G + + W+M
Sbjct: 201 RHE--GVEIMGPAAFIYANGENNIAITGE-GTIYGPPMDAEIRKRPNGASVVEKDVPWDM 257
Query: 165 WRQRTL-------PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL 217
++ + F RP I +N +++I + + S WN+ P+YC NV+IR +T+
Sbjct: 258 PIEQRIYDGMEGRTFYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVN 317
Query: 218 APADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTG 277
+ P+ DGID +S NV IE ++ GDD +K+G E G+ G P+ + IR
Sbjct: 318 S-TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVIRYSLA 376
Query: 278 SSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 337
GI GSET+G ++N+ GI KT RGG N + M N
Sbjct: 377 QHGHGGITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVG 436
Query: 338 KGIK---------IAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSP 388
K + +P K N P V I IKD Q G+ P
Sbjct: 437 KAFTWDLLGSAYYMGELAARYPARKVN-RLTPDVKNILIKDFIVESADQFFTANGIPEIP 495
Query: 389 FTGICLSN 396
F + + N
Sbjct: 496 FNQVVVEN 503
>gi|357495809|ref|XP_003618193.1| Polygalacturonase [Medicago truncatula]
gi|355493208|gb|AES74411.1| Polygalacturonase [Medicago truncatula]
Length = 425
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 170/399 (42%), Gaps = 45/399 (11%)
Query: 11 LLSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRR 70
L F+C S ++ + ++ DFG GDG + +TKAF +A +
Sbjct: 17 FLVLFSCLERCSATRGHSWRKLKATSSTFNVLDFGAKGDGHSDDTKAFEDAWAAACKMEA 76
Query: 71 S-----GGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRG 125
S G++ V P + +G N ++ L + + W
Sbjct: 77 STMVVPSGSVFLVKP-ISFSGP-NCEPNIVFQLDGKIIAPTSPSAW-------------- 120
Query: 126 RERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRS 185
G + ++ L + I G+ G IDGQG++WWN LP T+P + F S
Sbjct: 121 ----GSGTLQWLEFTKLNKITIKGK-GVIDGQGSVWWN--DSEKLPKTKPTALRFYGSDG 173
Query: 186 IIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYIST 245
+ +S + QNS ++ C+NV + +T +P DSPNTDGI +S +V I S +S
Sbjct: 174 VSVSGITIQNSQQTHLKFDSCTNVQVFDITTSSPGDSPNTDGIHLQNSQDVVISGSTLSC 233
Query: 246 GDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS----ETSGGVENVLAEH 301
GDD V++++G S I + V P GI++GS T V NV
Sbjct: 234 GDDCVSIQTG-----------CSNILVHNVN-CGPGHGISIGSLGKENTKACVSNVTVRD 281
Query: 302 INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPV 361
+ L N G+ +KT G G ++NI S++ + + + I I D + N +
Sbjct: 282 VTLQNTLTGVRIKTWQGGSGSVQNIMFSNIQVSDVKTPIMIDQFYCDGGKCR-NVTSAVA 340
Query: 362 VNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 400
V+ I +V GT ++ + P GI L I L+
Sbjct: 341 VSSIHYTNVHGTYTKEPIYFACSDSLPCKGITLDTIKLE 379
>gi|423232692|ref|ZP_17219092.1| hypothetical protein HMPREF1063_04912 [Bacteroides dorei
CL02T00C15]
gi|423247384|ref|ZP_17228434.1| hypothetical protein HMPREF1064_04640 [Bacteroides dorei
CL02T12C06]
gi|392623131|gb|EIY17236.1| hypothetical protein HMPREF1063_04912 [Bacteroides dorei
CL02T00C15]
gi|392632524|gb|EIY26483.1| hypothetical protein HMPREF1064_04640 [Bacteroides dorei
CL02T12C06]
Length = 919
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 159/368 (43%), Gaps = 46/368 (12%)
Query: 65 IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGR 124
I + + GG + +P G + + L S++ L+LAKGA I+ + ++ LP+
Sbjct: 471 IAEVSKQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFSGRAEDY-----LPAVFT 525
Query: 125 GRERPGGRYM---SFIHGDGLQDVVITGENGTIDG-----------------QGAIWWNM 164
E G M +FI+ +G ++ ITGE GTI G + + W+M
Sbjct: 526 RHE--GVEIMGPAAFIYANGENNIAITGE-GTIYGPSMDAEIRKRPNGASVVEKDVPWDM 582
Query: 165 WRQRTL-------PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL 217
++ + F RP I +N +++I + + S WN+ P+YC NV+IR +T+
Sbjct: 583 PIEQRIYDGMEGRTFYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVN 642
Query: 218 APADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTG 277
+ P+ DGID +S NV IE ++ GDD +K+G E G+ G P+ + IR
Sbjct: 643 S-TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVIRYSLA 701
Query: 278 SSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 337
GI GSET+G ++N+ GI KT RGG N + M N
Sbjct: 702 QHGHGGITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVG 761
Query: 338 KGIK---------IAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSP 388
K + +P K N P V I IKD Q G+ P
Sbjct: 762 KAFTWDLLGSAYYMGELAARYPARKVN-RLTPDVKNILIKDFIVESADQFFTANGIPEIP 820
Query: 389 FTGICLSN 396
F + + N
Sbjct: 821 FNQVVIEN 828
>gi|421478826|ref|ZP_15926555.1| polygalacturonase domain protein [Burkholderia multivorans CF2]
gi|400223986|gb|EJO54252.1| polygalacturonase domain protein [Burkholderia multivorans CF2]
Length = 665
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 105/183 (57%), Gaps = 20/183 (10%)
Query: 172 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 231
+ RP ++EF+ ++++ N QN+PFW HP C NVVIR VT + PN DG DPD
Sbjct: 333 YLRPCMVEFIGCTNVLMENYQTQNTPFWQHHPTACRNVVIRGVTTN--SIGPNNDGFDPD 390
Query: 232 SSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 288
+ ++V ED +TGDD +A+KSG + EYG A H +R T +S GI +GS
Sbjct: 391 ACTDVLCEDCTFNTGDDCIAIKSGKNRDTEYGPAKRH-----LVRNCTMNSGHGGITLGS 445
Query: 289 ETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 341
E GGVE + A ++++ N + + I VKTN+ RGG++++ V V + N G+
Sbjct: 446 EMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVSLPN---GVT 502
Query: 342 IAG 344
+ G
Sbjct: 503 LKG 505
>gi|423242175|ref|ZP_17223285.1| hypothetical protein HMPREF1065_03908 [Bacteroides dorei
CL03T12C01]
gi|392639919|gb|EIY33727.1| hypothetical protein HMPREF1065_03908 [Bacteroides dorei
CL03T12C01]
Length = 919
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 159/368 (43%), Gaps = 46/368 (12%)
Query: 65 IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGR 124
I + + GG + +P G + + L S++ L+LAKGA I+ + ++ LP+
Sbjct: 471 IAEVSKQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFSGRAEDY-----LPAVFT 525
Query: 125 GRERPGGRYM---SFIHGDGLQDVVITGENGTIDG-----------------QGAIWWNM 164
E G M +FI+ +G ++ ITGE GTI G + + W+M
Sbjct: 526 RHE--GVEIMGPAAFIYANGENNIAITGE-GTIYGPSMDAEIRKRPNGASVVEKDVPWDM 582
Query: 165 WRQRTL-------PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL 217
++ + F RP I +N +++I + + S WN+ P+YC NV+IR +T+
Sbjct: 583 PIEQRIYDGMEGRTFYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVN 642
Query: 218 APADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTG 277
+ P+ DGID +S NV IE ++ GDD +K+G E G+ G P+ + IR
Sbjct: 643 S-TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVIIRYSLA 701
Query: 278 SSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 337
GI GSET+G ++N+ GI KT RGG N + M N
Sbjct: 702 QHGHGGITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVG 761
Query: 338 KGIK---------IAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSP 388
K + +P K N P V I IKD Q G+ P
Sbjct: 762 KAFTWDLLGSAYYMGELAARYPARKVN-RLTPDVKNILIKDFIVESADQFFTANGIPEIP 820
Query: 389 FTGICLSN 396
F + + N
Sbjct: 821 FNQVVIEN 828
>gi|9967518|emb|CAC05657.1| endopolygalacturonase [Brassica napus]
gi|9967520|emb|CAC05658.1| endopolygalacturonase [Brassica napus]
Length = 434
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 169/375 (45%), Gaps = 43/375 (11%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPG-VYLTGSFNLTSHMTLY 97
+S++DFG GDGKT +T+AF A + SG L VP G Y S L
Sbjct: 68 VSVSDFGAKGDGKTDDTQAFVNAWKK--ACSSSGAVNLLVPEGKTYFLKSLRLNGPCKSV 125
Query: 98 LAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMS-FIHGDGLQDVVITG-ENGTID 155
L + L + ++R +S +I DG+ + + G GT++
Sbjct: 126 LT----------------VQILGTLSASQQRSDYEDLSKWITFDGVNSLTVDGGATGTVN 169
Query: 156 GQGA-IWW--NMWRQRTLPFTR-PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVI 211
G GA WW + R T+ P + F NS+++ ++N+ +++ I CSNV +
Sbjct: 170 GNGAETWWENSCKRNEAKKCTKAPTALTFYNSKNLRVNNLRVKDAQQIQISIEKCSNVQV 229
Query: 212 RYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGIT 271
V + APADSPNTDGI ++ N+ + +S I TGDD ++++SG S +
Sbjct: 230 SNVEVTAPADSPNTDGIHITNTQNIQVSNSIIGTGDDCISIESG-----------SQNVQ 278
Query: 272 IRRVTGSSPFSGIAVGS----ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 327
I +T P GI++GS + V V + L G+ +KTN G G NI
Sbjct: 279 INDLT-CGPGHGISIGSLGDDNSKAFVSGVTVDGAKLSGTDNGVRIKTNQGGSGTASNII 337
Query: 328 VSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL-IQGLKN 386
++ MEN I I D D +A+ + N + +++ GT + KN
Sbjct: 338 FQNIQMENVENPIIIDQDYCDKSKCTEQKSAVQIKN-VVYRNISGTSASDIAITFNCSKN 396
Query: 387 SPFTGICLSNINLQG 401
P GI L +N++G
Sbjct: 397 YPCQGIVLDKVNIKG 411
>gi|212695092|ref|ZP_03303220.1| hypothetical protein BACDOR_04630 [Bacteroides dorei DSM 17855]
gi|212662408|gb|EEB22982.1| hypothetical protein BACDOR_04630 [Bacteroides dorei DSM 17855]
Length = 475
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 160/351 (45%), Gaps = 51/351 (14%)
Query: 18 FSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLY 77
F + + C I P R SI D+G V GK NT+A +AI ++GG +
Sbjct: 39 FPMEPIKEC--IFPER----DFSIVDYGAVEGGKQKNTEAIAKAI---DACNKAGGGRVV 89
Query: 78 VPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFI 137
+P G +LTGS + S++ L+LA+ A+++ T D ++ L A + S+ G E Y +
Sbjct: 90 IPAGEWLTGSIHFKSNVNLHLAENAIVRFTDDPADY-LPAVMTSW-EGME--CYNYSPLL 145
Query: 138 HGDGLQDVVITGENGTIDGQGAIWWNMWRQR------------TLPFT------------ 173
+ +++ ITG+ G + +W +W +R T+ T
Sbjct: 146 YAFECENIAITGK-GLLKPHMGLW-KVWFKRPPAHMEALKELYTMASTDVPVEQRQMAKG 203
Query: 174 ----RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 229
RP+LI+F +++++ + SPFW IH + R + + A N DGID
Sbjct: 204 ENNLRPHLIQFNRCKNVLLDGFHIEESPFWTIHMYLVDGGIARNLNVKAMGH--NNDGID 261
Query: 230 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 289
+ + N IED GDD V +KSG ++ P+ I +R + + + VGSE
Sbjct: 262 LEMTRNFLIEDCVFEQGDDAVVIKSGRNQDAWRLNTPTENIVVRNCLVLAGQTLLGVGSE 321
Query: 290 TSGGVENVLAEHINL-YNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG 339
SGGV N+ NV +KTN RG F+ N VYME + G
Sbjct: 322 ISGGVRNIYMHDCEAPNNVHRLFFIKTNHRRGAFVEN-----VYMEKIKTG 367
>gi|212693801|ref|ZP_03301929.1| hypothetical protein BACDOR_03322 [Bacteroides dorei DSM 17855]
gi|212663690|gb|EEB24264.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 919
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 159/368 (43%), Gaps = 46/368 (12%)
Query: 65 IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGR 124
I + + GG + +P G + + L S++ L+LAKGA I+ + ++ LP+
Sbjct: 471 IAEVSKQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFSGRAEDY-----LPAVFT 525
Query: 125 GRERPGGRYM---SFIHGDGLQDVVITGENGTIDG-----------------QGAIWWNM 164
E G M +FI+ +G ++ ITGE GTI G + + W+M
Sbjct: 526 RHE--GVEIMGPAAFIYANGENNIAITGE-GTIYGPSMDAEIRKRPNGASVVEKDVPWDM 582
Query: 165 WRQRTL-------PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL 217
++ + F RP I +N +++I + + S WN+ P+YC NV+IR +T+
Sbjct: 583 PIEQRIYDGMEGRTFYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVN 642
Query: 218 APADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTG 277
+ P+ DGID +S NV IE ++ GDD +K+G E G+ G P+ + IR
Sbjct: 643 S-TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVIIRYSLA 701
Query: 278 SSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 337
GI GSET+G ++N+ GI KT RGG N + M N
Sbjct: 702 QHGHGGITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVG 761
Query: 338 KGIK---------IAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSP 388
K + +P K N P V I IKD Q G+ P
Sbjct: 762 KAFTWDLLGSAYYMGELAARYPARKVN-RLTPDVKNILIKDFIVESADQFFTANGIPEIP 820
Query: 389 FTGICLSN 396
F + + N
Sbjct: 821 FNQVVIEN 828
>gi|420246079|ref|ZP_14749578.1| endopolygalacturonase, partial [Rhizobium sp. CF080]
gi|398043755|gb|EJL36633.1| endopolygalacturonase, partial [Rhizobium sp. CF080]
Length = 441
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 139/308 (45%), Gaps = 11/308 (3%)
Query: 33 RYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTS 92
R + I DFG + N A + I + GGTL +P G +L+G L S
Sbjct: 80 RQETALLDIRDFGASPEASN-NAPAIQRTIAALP----PGGTL-RIPAGRWLSGPIFLKS 133
Query: 93 HMTLYLAKGAVIKATQDTWNWPLIAPLPSYGR----GRERPGGRYMSFIHGDGLQDVVIT 148
HM L + G + A N+P++ + GR Y S I+ + V +
Sbjct: 134 HMALLVEDGGELAAIASRENFPILPARHADGRILGTWEGVAEACYASLINAIDCRGVHLA 193
Query: 149 GENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNS-RSIIISNVIFQNSPFWNIHPVYCS 207
G G W W + T R F+++ + +S + +NSP W +HPV C
Sbjct: 194 GAGIIDGGGDRGDWWSWPKETRQGARRARTVFLSACEDVTLSGLTIRNSPSWTVHPVLCK 253
Query: 208 NVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPS 267
++ +TI DSPNTDG +P+SSS++ + +IS GDD +A+K+G P+
Sbjct: 254 GLIAADLTIENDPDSPNTDGFNPESSSDIRLVGLHISVGDDCIALKAGKRSPLGGPDRPT 313
Query: 268 SGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 327
+ I + +GSE S G+ ++ + + G+ +KT GRGG + +I
Sbjct: 314 EHVRIENCLMERGHGAVVIGSEMSAGISDIAIRNCHFKGTDRGLRIKTRRGRGGLVADIR 373
Query: 328 VSDVYMEN 335
+SD ME+
Sbjct: 374 LSDSLMED 381
>gi|383120489|ref|ZP_09941217.1| parallel beta-helix [Bacteroides sp. 1_1_6]
gi|251840459|gb|EES68541.1| parallel beta-helix [Bacteroides sp. 1_1_6]
Length = 506
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 171/385 (44%), Gaps = 40/385 (10%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
IS FG V D L+T+A ++AI SGG + + PG Y TG+ + S + L +
Sbjct: 58 ISANSFGAVADSTVLSTEAIQKAI---DSCAISGGGTVVLQPGYYQTGALFVKSGVNLQI 114
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSF----IHGDGLQDVVITGENGTI 154
KG + A+ D ++P R R G M++ I+ ++ I+GE GT+
Sbjct: 115 GKGVTLLASPDIHHYPEF---------RSRIAGIEMTWPAAVINIVDEKNAAISGE-GTL 164
Query: 155 DGQGAIWWNM-WRQRT------------LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 201
D +G ++W+ W R R I S I +S + FW
Sbjct: 165 DCRGKVFWDKYWEMRKEYEARGLRWIVDYDCKRVRGILVERSSDITLSGFTLMRTGFWGC 224
Query: 202 HPVYCSNVVIRYVTILAP--ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEY 259
+Y I +TI P+TDGID DSS N+ IE+ + DD + +KSG D
Sbjct: 225 QILYSDYCTIDGLTINNNIGGHGPSTDGIDIDSSCNILIENCDVDCNDDNICIKSGRDAD 284
Query: 260 GIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 319
G+ P+ + +R T I GSETSG + NVL + + +K+ + R
Sbjct: 285 GLRVNRPTENVVVRNCTARKGAGLITCGSETSGSIRNVLGYDLKAVGTYTVLRLKSAMNR 344
Query: 320 GGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPV-VNGITIKDVWGTKVQQS 378
GG I NI ++ V EN R+ +A D+ +P ++ + LP G I + W KV +
Sbjct: 345 GGTIENIYMTRVSAENVRQ--VLAADLNWNP--SYSYSTLPKEYEGKEIPEHW--KVMLT 398
Query: 379 GLIQGLKNSP-FTGICLSNINLQGV 402
+ K P F I LS + + V
Sbjct: 399 PVEPPEKGYPRFRDIYLSQVKAENV 423
>gi|345513259|ref|ZP_08792781.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|229437122|gb|EEO47199.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
Length = 919
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 159/368 (43%), Gaps = 46/368 (12%)
Query: 65 IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGR 124
I + + GG + +P G + + L S++ L+LAKGA I+ + ++ LP+
Sbjct: 471 IAEVSKQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFSGRAKDY-----LPAVFT 525
Query: 125 GRERPGGRYM---SFIHGDGLQDVVITGENGTIDG-----------------QGAIWWNM 164
E G M +FI+ +G ++ ITGE GTI G + + W+M
Sbjct: 526 RHE--GVEIMGPAAFIYANGENNIAITGE-GTIYGPSMDAEIRKRPNGASVVEKDVPWDM 582
Query: 165 WRQRTL-------PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL 217
++ + F RP I +N +++I + + S WN+ P+YC NV+IR +T+
Sbjct: 583 PIEQRIYDGMKGRTFYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVN 642
Query: 218 APADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTG 277
+ P+ DGID +S NV IE ++ GDD +K+G E G+ G P+ + IR
Sbjct: 643 S-TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVIIRYSLA 701
Query: 278 SSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 337
GI GSET+G ++N+ GI KT RGG N + M N
Sbjct: 702 QHGHGGITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVG 761
Query: 338 KGIK---------IAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSP 388
K + +P K N P V I IKD Q G+ P
Sbjct: 762 KAFTWDLLGSAYYMGELAARYPARKVN-RLTPNVKNILIKDFIVESADQFFTANGIPEIP 820
Query: 389 FTGICLSN 396
F + + N
Sbjct: 821 FNQVVIEN 828
>gi|421472155|ref|ZP_15920382.1| polygalacturonase domain protein, partial [Burkholderia multivorans
ATCC BAA-247]
gi|400223840|gb|EJO54116.1| polygalacturonase domain protein, partial [Burkholderia multivorans
ATCC BAA-247]
Length = 615
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 105/183 (57%), Gaps = 20/183 (10%)
Query: 172 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 231
+ RP ++EF+ ++++ N QN+PFW HP C NVVIR VT + PN DG DPD
Sbjct: 283 YLRPCMVEFIGCTNVLMENYQTQNTPFWQHHPTACRNVVIRGVTTN--SIGPNNDGFDPD 340
Query: 232 SSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 288
+ ++V ED +TGDD +A+KSG + EYG A H +R T +S GI +GS
Sbjct: 341 ACTDVLCEDCTFNTGDDCIAIKSGKNRDTEYGPAKRH-----LVRNCTMNSGHGGITLGS 395
Query: 289 ETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 341
E GGVE + A ++++ N + + I VKTN+ RGG++++ V V + N G+
Sbjct: 396 EMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVSLPN---GVT 452
Query: 342 IAG 344
+ G
Sbjct: 453 LKG 455
>gi|160884725|ref|ZP_02065728.1| hypothetical protein BACOVA_02714 [Bacteroides ovatus ATCC 8483]
gi|156109760|gb|EDO11505.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
Length = 527
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 169/367 (46%), Gaps = 44/367 (11%)
Query: 65 IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGR 124
I+ + + GG + +P G + +G L S++ L+LA+G+ I+ + ++ LP+
Sbjct: 73 IEEISQKGGGTVIIPKGKWKSGRIVLKSNVNLHLAEGSEIEFPGNAEDY-----LPAVFT 127
Query: 125 GRERPGGRYM---SFIHGDGLQDVVITGE----------------NGTIDGQGAIWWNMW 165
E G M SFI+ +G ++ ITG+ NG + I N
Sbjct: 128 RHE--GIEIMGSGSFIYANGEDNIAITGKGVIYGPSLDAEIRQRPNGNTVVEKDILNNAP 185
Query: 166 RQRTL-------PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILA 218
++ + F +P I +N +++I + + S FWN+ P+YC NV+IR +T+ +
Sbjct: 186 VEKRVFDGMDGRGFYKPKTISPINCTNVLIEGITMERSTFWNVCPIYCENVIIRGITVNS 245
Query: 219 PADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGS 278
P+ DGID +S NV IE ++ GDD +K+G E G+ G P+ + IR
Sbjct: 246 IG-IPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVIRYSLAQ 304
Query: 279 SPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK 338
G+ GSET+GGV+NV +GI KT R G + + + M N +
Sbjct: 305 QGHGGVTCGSETAGGVKNVYVHDCVFDGTQIGIRFKTRRNRAGGVNDALYEKIRMINVGE 364
Query: 339 GIK--IAGD---VGDHPDDKFNPNAL----PVVNGITIKDVWGTKVQQSGLIQGLKNSPF 389
K + G VG+ +++ P A+ P + I IK+ ++ + G+ P
Sbjct: 365 AFKWDLLGSKRYVGELA-ERYPPRAVNKLTPTIKDIHIKNFIVESAEKILSVNGIPEIPC 423
Query: 390 TGICLSN 396
+ + + N
Sbjct: 424 SNVLIEN 430
>gi|383115308|ref|ZP_09936066.1| hypothetical protein BSGG_2810 [Bacteroides sp. D2]
gi|313695275|gb|EFS32110.1| hypothetical protein BSGG_2810 [Bacteroides sp. D2]
Length = 496
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 155/341 (45%), Gaps = 36/341 (10%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
IS FG V D L+T+A ++AI +GG + + PG YL G+ + S + L L
Sbjct: 57 ISANSFGAVADSTRLSTEAIQKAI---DECSAAGGGTVILAPGYYLVGALFIKSGVNLQL 113
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYM----SFIHGDGLQDVVITGENGTI 154
KG + A+ D N+P R R G M + ++ ++V I+GE G I
Sbjct: 114 DKGVTLLASTDINNYPEF---------RSRIAGIEMIWPSAVLNVIKQKNVAISGE-GMI 163
Query: 155 DGQGAIWWNMWRQRTLPFTRPNL-------------IEFMNSRSIIISNVIFQNSPFWNI 201
D +G +W+ + + + L I S + + + + FW
Sbjct: 164 DCRGKKFWDQYWSMRREYEKKGLRWAVDYDCKRVRGILVERSTDVTLKDFTLMRTGFWAC 223
Query: 202 HPVYCSNVVIRYVTILAP--ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEY 259
+Y I +TI P+TDG+D DSS+N+ IE+ I DD + +KSG D
Sbjct: 224 QILYSDYCSINGLTINNNIGGRGPSTDGVDIDSSTNILIENCMIDCNDDNICLKSGRDTD 283
Query: 260 GIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 319
G+ P+ + IR T I GSETSGG+ N+L + + +K+ + R
Sbjct: 284 GLRVNRPTENVVIRNCTTRKGAGLITCGSETSGGIRNILGHDLTAQGTWSVLRLKSAMNR 343
Query: 320 GGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALP 360
GG I NI ++ V ++ R +A D+ +P +++ + LP
Sbjct: 344 GGIIENIYITRVKADSVRN--VLAADLNWNP--QYSYSTLP 380
>gi|317474838|ref|ZP_07934108.1| glycoside hydrolase [Bacteroides eggerthii 1_2_48FAA]
gi|316908976|gb|EFV30660.1| glycoside hydrolase [Bacteroides eggerthii 1_2_48FAA]
Length = 492
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 163/370 (44%), Gaps = 50/370 (13%)
Query: 65 IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGR 124
I+ L GG + +P G +L+G L S + L++A+GA I ++ LP+
Sbjct: 49 IEQLSSQGGGTVIIPAGKWLSGRIELKSFVELHIARGAEIVFGGCAEDY-----LPAVFT 103
Query: 125 GRERPGGRYM---SFIHGDGLQDVVITGE----------------NGTIDGQGAIWWNMW 165
E G M +FI+ + +++ ITGE NG + I W+M
Sbjct: 104 RHE--GVEIMGPGAFIYANNQENIAITGEGRILGPDMDAEIRKRPNGASVVEKDIPWDMP 161
Query: 166 RQRTL-------PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILA 218
++ + F RP I +N R+++I + + S WN+ P+YC NV+IR +T+ +
Sbjct: 162 VEQRIYDGMDGRTFYRPKTISPINCRNVLIEGITMERSTLWNVVPIYCENVIIRGITVNS 221
Query: 219 PADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGS 278
+ P+ DGID +S N+ IE ++ GDD +K+G + G+ G + + IR
Sbjct: 222 -TEVPSGDGIDIESCKNILIEYCTLNCGDDCFTLKAGRADDGLRVGKATENVVIRHSLAQ 280
Query: 279 SPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGG--------FIRNITVSD 330
GI +GSET+G ++N+ GI KT RGG +R I V
Sbjct: 281 HGHGGITIGSETAGMIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSNHTIYERLRMINVGK 340
Query: 331 VY----MENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 386
+ + NA ++A + D PN ++ IKD +Q G+
Sbjct: 341 AFTWDLLGNAYYMGELAARYPERAVDHLTPN----ISNTVIKDFIVESSKQFFTANGIPE 396
Query: 387 SPFTGICLSN 396
PF+ + N
Sbjct: 397 IPFSNTLIEN 406
>gi|206564620|ref|YP_002235383.1| putative polygalacturonate hydrolase [Burkholderia cenocepacia
J2315]
gi|444359790|ref|ZP_21161085.1| polygalacturonase domain protein [Burkholderia cenocepacia BC7]
gi|444367969|ref|ZP_21167846.1| polygalacturonase domain protein [Burkholderia cenocepacia
K56-2Valvano]
gi|198040660|emb|CAR56646.1| putative polygalacturonate hydrolase [Burkholderia cenocepacia
J2315]
gi|443601359|gb|ELT69502.1| polygalacturonase domain protein [Burkholderia cenocepacia BC7]
gi|443601809|gb|ELT69929.1| polygalacturonase domain protein [Burkholderia cenocepacia
K56-2Valvano]
Length = 665
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 101/174 (58%), Gaps = 17/174 (9%)
Query: 172 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 231
+ RP ++EF+ +++++N QN+PFW HP NVVIR VT + PN DG DPD
Sbjct: 333 YLRPCMVEFIGCTNVLMANYQTQNTPFWQHHPTASRNVVIRGVTTN--SIGPNNDGFDPD 390
Query: 232 SSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 288
+ ++V ED +TGDD +A+KSG D EYG A H IR T +S GI +GS
Sbjct: 391 ACTDVLCEDCTFNTGDDCIAIKSGKDRDTEYGPAKRH-----LIRNCTMNSGHGGITLGS 445
Query: 289 ETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMEN 335
E GGVE + A ++++ N + + I VKTN+ RGG++++ V V + N
Sbjct: 446 EMGGGVEQIYASNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVTLPN 499
>gi|421863816|ref|ZP_16295509.1| Polygalacturonase [Burkholderia cenocepacia H111]
gi|358076142|emb|CCE46387.1| Polygalacturonase [Burkholderia cenocepacia H111]
Length = 665
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 101/174 (58%), Gaps = 17/174 (9%)
Query: 172 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 231
+ RP ++EF+ +++++N QN+PFW HP NVVIR VT + PN DG DPD
Sbjct: 333 YLRPCMVEFIGCTNVLMANYQTQNTPFWQHHPTASRNVVIRGVTTN--SIGPNNDGFDPD 390
Query: 232 SSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 288
+ ++V ED +TGDD +A+KSG D EYG A H IR T +S GI +GS
Sbjct: 391 ACTDVLCEDCTFNTGDDCIAIKSGKDRDTEYGPAKRH-----LIRNCTMNSGHGGITLGS 445
Query: 289 ETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMEN 335
E GGVE + A ++++ N + + I VKTN+ RGG++++ V V + N
Sbjct: 446 EMGGGVEQIYASNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVTLPN 499
>gi|345519938|ref|ZP_08799345.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|254836194|gb|EET16503.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
Length = 594
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 157/368 (42%), Gaps = 46/368 (12%)
Query: 65 IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGR 124
I + GG + +P G + + L S++ L+LAKGA I+ ++ LP+
Sbjct: 146 IAEVSNQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFAGRAEDY-----LPAVFT 200
Query: 125 GRERPGGRYM---SFIHGDGLQDVVITGENGTIDG-----------------QGAIWWNM 164
E G M +FI+ +G ++ ITGE GTI G + + W+M
Sbjct: 201 RHE--GVEIMGPAAFIYANGENNIAITGE-GTIYGPPMDAEIRKRPNGASVVEKDVPWDM 257
Query: 165 WRQRTL-------PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL 217
++ + F RP I +N +++I + + S WN+ P+YC NV+IR +T+
Sbjct: 258 PIEQRIYDGMEGRTFYRPKTISPINCTNVLIEGIAMERSTLWNVVPIYCENVIIRGITVN 317
Query: 218 APADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTG 277
+ P+ DGID +S NV IE ++ GDD +K+G E G+ G P+ + IR
Sbjct: 318 S-TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVIRYSLA 376
Query: 278 SSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 337
GI GSET+G ++N+ GI KT RGG N + M N
Sbjct: 377 QHGHGGITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVG 436
Query: 338 KGIK---------IAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSP 388
K + +P K N P V I IKD Q G+ P
Sbjct: 437 KAFTWDLLGSAYYMGELAARYPARKVN-RLTPDVKNILIKDFIVESADQFFTANGIPEIP 495
Query: 389 FTGICLSN 396
F + + N
Sbjct: 496 FNQVVVEN 503
>gi|319644257|ref|ZP_07998770.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|317384248|gb|EFV65220.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 580
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 157/368 (42%), Gaps = 46/368 (12%)
Query: 65 IQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGR 124
I + GG + +P G + + L S++ L+LAKGA I+ ++ LP+
Sbjct: 132 IAEVSNQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFAGRAEDY-----LPAVFT 186
Query: 125 GRERPGGRYM---SFIHGDGLQDVVITGENGTIDG-----------------QGAIWWNM 164
E G M +FI+ +G ++ ITGE GTI G + + W+M
Sbjct: 187 RHE--GVEIMGPAAFIYANGENNIAITGE-GTIYGPPMDAEIRKRPNGASVVEKDVPWDM 243
Query: 165 WRQRTL-------PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL 217
++ + F RP I +N +++I + + S WN+ P+YC NV+IR +T+
Sbjct: 244 PIEQRIYDGMEGRTFYRPKTISPINCTNVLIEGIAMERSTLWNVVPIYCENVIIRGITVN 303
Query: 218 APADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTG 277
+ P+ DGID +S NV IE ++ GDD +K+G E G+ G P+ + IR
Sbjct: 304 S-TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVIRYSLA 362
Query: 278 SSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 337
GI GSET+G ++N+ GI KT RGG N + M N
Sbjct: 363 QHGHGGITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVG 422
Query: 338 KGIK---------IAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSP 388
K + +P K N P V I IKD Q G+ P
Sbjct: 423 KAFTWDLLGSAYYMGELAARYPARKVN-RLTPDVKNILIKDFIVESADQFFTANGIPEIP 481
Query: 389 FTGICLSN 396
F + + N
Sbjct: 482 FNQVVVEN 489
>gi|298383805|ref|ZP_06993366.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298263409|gb|EFI06272.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 506
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 171/385 (44%), Gaps = 40/385 (10%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
IS FG V D L+T+A ++AI SGG + + PG Y TG+ + S + L +
Sbjct: 58 ISANSFGAVADSTVLSTEAIQKAI---DSCAVSGGGTVVLQPGYYQTGALFVKSGVNLQI 114
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSF----IHGDGLQDVVITGENGTI 154
KG + A+ D ++P R R G M++ I+ ++ I+GE GT+
Sbjct: 115 GKGVTLLASPDIHHYPEF---------RSRIAGIEMTWPAAVINIVDEKNAAISGE-GTL 164
Query: 155 DGQGAIWWNM-WRQRT------------LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 201
D +G ++W+ W R R I S I +S + FW
Sbjct: 165 DCRGKVFWDKYWEMRKEYEARGLRWIVDYDCKRVRGILVERSSDITLSGFTLMRTGFWGC 224
Query: 202 HPVYCSNVVIRYVTILAP--ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEY 259
+Y I +TI P+TDGID DSS N+ IE+ + DD + +KSG D
Sbjct: 225 QILYSDYCTIDGLTINNNIGGHGPSTDGIDIDSSCNILIENCDVDCNDDNICIKSGRDAD 284
Query: 260 GIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 319
G+ P+ + +R T I GSETSG + NVL + + +K+ + R
Sbjct: 285 GLRVNRPTENVVVRNCTARKGAGLITCGSETSGSIRNVLGYDLKAVGTYTVLRLKSAMNR 344
Query: 320 GGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPV-VNGITIKDVWGTKVQQS 378
GG I NI ++ V EN R+ +A D+ +P ++ + LP G I + W KV +
Sbjct: 345 GGTIENIYMTRVSAENVRQ--VLAADLNWNP--SYSYSTLPKEYEGKEIPEHW--KVMLT 398
Query: 379 GLIQGLKNSP-FTGICLSNINLQGV 402
+ K P F I LS + + V
Sbjct: 399 PVEPPEKGYPRFRDIYLSQVKAENV 423
>gi|254249598|ref|ZP_04942918.1| Endopolygalacturonase [Burkholderia cenocepacia PC184]
gi|124876099|gb|EAY66089.1| Endopolygalacturonase [Burkholderia cenocepacia PC184]
Length = 667
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 105/183 (57%), Gaps = 20/183 (10%)
Query: 172 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 231
+ RP ++EF+ +++++N QN+PFW HP NVVIR VT + PN DG DPD
Sbjct: 335 YLRPCMVEFIGCTNVLMANYQTQNTPFWQHHPTASRNVVIRGVTTN--SIGPNNDGFDPD 392
Query: 232 SSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 288
+ ++V ED +TGDD +A+KSG D EYG A H IR T +S GI +GS
Sbjct: 393 ACTDVLCEDCTFNTGDDCIAIKSGKDRDVEYGPAKRH-----LIRNCTMNSGHGGITLGS 447
Query: 289 ETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 341
E GGVE + A ++++ N + + I VKTN+ RGG++++ V V + N G+
Sbjct: 448 EMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVTLPN---GVT 504
Query: 342 IAG 344
+ G
Sbjct: 505 LKG 507
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.138 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,556,820,796
Number of Sequences: 23463169
Number of extensions: 352769343
Number of successful extensions: 724911
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2527
Number of HSP's successfully gapped in prelim test: 1564
Number of HSP's that attempted gapping in prelim test: 713514
Number of HSP's gapped (non-prelim): 5640
length of query: 443
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 297
effective length of database: 8,933,572,693
effective search space: 2653271089821
effective search space used: 2653271089821
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 78 (34.7 bits)