BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013402
(443 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A7PZL3|PGLR_VITVI Probable polygalacturonase OS=Vitis vinifera GN=GSVIVT00026920001
PE=1 SV=1
Length = 491
Score = 419 bits (1077), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/409 (50%), Positives = 272/409 (66%), Gaps = 3/409 (0%)
Query: 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM 94
R S+ DFGGVGDG+TLNTKAF++A+ + GG LYVP G +LTGSF+LTSH
Sbjct: 59 RAHSASLVDFGGVGDGQTLNTKAFQDAVSELSKYGSEGGAQLYVPAGKWLTGSFSLTSHF 118
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL+L + AV+ A+QD WP+I PLPSYGRGR+ GRY S I G L DV+ITG+NGTI
Sbjct: 119 TLFLHRDAVLLASQDISQWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIITGDNGTI 178
Query: 155 DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
DGQG +WW + L +TRP LIE M S I ISN+ NSP WN+HPVY N++I+ +
Sbjct: 179 DGQGGLWWQRFHGGKLKYTRPYLIELMYSADIQISNLTLLNSPSWNVHPVYSRNILIQGI 238
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
TILAP SPNTDGI+PDS +N IED YI +GDD VAVKSGWDEYGIAYG P+ + IRR
Sbjct: 239 TILAPVRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 298
Query: 275 VTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 333
+T SP+S IA+GSE SGG+++V AE I N GI +KT IGRGG++++I V + M
Sbjct: 299 LTCISPYSAVIALGSEMSGGIQDVRAEDIVAINSESGIRIKTGIGRGGYVKDIYVRGMTM 358
Query: 334 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 393
+ + + G+ G H D+ ++P A PV+ GI +D+ V + ++G+ + PFTGIC
Sbjct: 359 KTMKWAFWMTGNYGSHADNHYDPKAFPVIQGINYRDMVAENVSMAARLEGIPSDPFTGIC 418
Query: 394 LSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSS--QQTGACS 440
+SN+ + A P C+DV G + V P PCS L ++T C+
Sbjct: 419 ISNVTIHLAAKAKKVPWTCTDVEGISSGVTPTPCSTLPDQGPEKTSLCN 467
>sp|Q8RY29|ADPG2_ARATH Polygalacturonase ADPG2 OS=Arabidopsis thaliana GN=ADPG2 PE=2 SV=2
Length = 433
Score = 129 bits (325), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 177/375 (47%), Gaps = 44/375 (11%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPG-VYLTGSFNLT--SHMT 95
+S++DFG GDGKT +T+AF A + +G L VP G YL S LT +
Sbjct: 68 VSVSDFGAKGDGKTDDTQAFVNAWKK--ACSSNGAVNLLVPKGNTYLLKSIQLTGPCNSI 125
Query: 96 LYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITG-ENGTI 154
L + + A+Q ++ I+ +I DG+ ++ + G + G +
Sbjct: 126 LTVQIFGTLSASQKRSDYKDISK-----------------WIMFDGVNNLSVDGGDTGVV 168
Query: 155 DGQGAIWW--NMWRQRTLPFTR-PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVI 211
DG G WW + R + P T+ P + F NS+S+I+ N+ +N+ I CSNV +
Sbjct: 169 DGNGETWWQNSCKRNKAKPCTKAPTALTFYNSKSLIVKNLKVRNAQQIQISIEKCSNVQV 228
Query: 212 RYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGIT 271
V + APADSPNTDGI ++ N+ + +S I TGDD ++++SG S +
Sbjct: 229 SNVVVTAPADSPNTDGIHITNTQNIRVSESIIGTGDDCISIESG-----------SQNVQ 277
Query: 272 IRRVTGSSPFSGIAVGS----ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 327
I +T P GI++GS + V V + L G+ +KT G G NI
Sbjct: 278 INDIT-CGPGHGISIGSLGDDNSKAFVSGVTVDGAKLSGTDNGVRIKTYQGGSGTASNII 336
Query: 328 VSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL-IQGLKN 386
++ M+N + I I D D +A+ V N + +D+ GT ++ + KN
Sbjct: 337 FQNIQMDNVKNPIIIDQDYCDKSKCTTEKSAVQVKN-VVYRDISGTSASENAITFNCSKN 395
Query: 387 SPFTGICLSNINLQG 401
P GI L +N++G
Sbjct: 396 YPCQGIVLDRVNIKG 410
>sp|Q9LW07|PGLR3_ARATH Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana
GN=At3g15720 PE=1 SV=1
Length = 456
Score = 118 bits (296), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 119/420 (28%), Positives = 192/420 (45%), Gaps = 58/420 (13%)
Query: 36 NDKISITDFGGVGDGKTLNTKAFREAIYRI-------QHLRRSGGTLLYVPPGVYLTGSF 88
++ + +T FG VGDG T +++AF +A + Q + +G T + P + GS
Sbjct: 21 SNALDVTQFGAVGDGVTDDSQAFLKAWEAVCSGTGDGQFVVPAGMTFMLQP--LKFQGSC 78
Query: 89 NLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVIT 148
T L K L+AP +G + +++ F +GL VI
Sbjct: 79 KSTPVFVQMLGK--------------LVAPSKGNWKGDKD---QWILFTDIEGL---VIE 118
Query: 149 GENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 208
G+ G I+GQG+ WW +RP ++F + ++ +S + +SP +IH C+
Sbjct: 119 GD-GEINGQGSSWWEH------KGSRPTALKFRSCNNLRLSGLTHLDSPMAHIHISECNY 171
Query: 209 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 268
V I + I AP SPNTDGID +SSNV I+D I+TGDD +A+ SG I S
Sbjct: 172 VTISSLRINAPESSPNTDGIDVGASSNVVIQDCIIATGDDCIAINSGTSNIHI------S 225
Query: 269 GITIRRVTGSSPFSGIAVGSETSGG----VENVLAEHINLYNVGVGIHVKTNIGRGGFIR 324
GI P GI++GS G VENV ++ N G +KT G G+ R
Sbjct: 226 GIDC------GPGHGISIGSLGKDGETATVENVCVQNCNFRGTMNGARIKTWQGGSGYAR 279
Query: 325 NITVSDVYMENARKGIKIAG--DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL-I 381
IT + + ++N I I + GD + K ++ V+ + + GT + G+
Sbjct: 280 MITFNGITLDNVENPIIIDQFYNGGDSDNAKDRKSSAVEVSKVVFSNFIGTSKSEYGVDF 339
Query: 382 QGLKNSPFTGICLSNINLQGVAGPTSPPL--KCSDVSGSAYQVKP-WPCSELSSSQQTGA 438
+ + P T I L ++ ++ + + +C +V G++ P C ELS+ + A
Sbjct: 340 RCSERVPCTEIFLRDMKIETASSGSGQVAQGQCLNVRGASTIAVPGLECLELSTDMFSSA 399
>sp|Q02096|PGLR_PERAE Polygalacturonase OS=Persea americana PE=2 SV=1
Length = 462
Score = 112 bits (280), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 180/396 (45%), Gaps = 45/396 (11%)
Query: 31 PMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGV-YLTG--S 87
P + IS+ DFG GDG T +TKAF +A S G++L VP YL +
Sbjct: 77 PETSPDTDISVDDFGARGDG-TDDTKAFEKAWKDAC----SSGSVLIVPENKNYLLKQIT 131
Query: 88 FNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVI 147
F+ L + I+A+ D +W G R+R +I + + ++ +
Sbjct: 132 FSGPCKSDLRVKIRGTIEASSDQSDW--------VGHNRKR-------WIEFEDISNLTL 176
Query: 148 TGENGTIDGQGAIWWN--MWRQRTLPF-TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPV 204
G GT +G G WW+ R+++LP + P + F + +++I+S++ ++S ++
Sbjct: 177 EG-GGTSNGNGETWWDSSCKRKKSLPCKSAPTALTFRSCKNLIVSDLSIKDSQKMHLSFD 235
Query: 205 YCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYG 264
C +V+ + + AP SPNTDGI + + + +S I TGDD ++++SG
Sbjct: 236 KCQDVIASNLMVTAPEHSPNTDGIHITGTQRIHVMNSVIGTGDDCISIESG--------- 286
Query: 265 HPSSGITIRRVTGSSPFSGIAVGS----ETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 320
S + I P GI++GS + V VL + NL++ G+ +KT G
Sbjct: 287 ---SKMVIATNITCGPGHGISIGSLGDRNSEAHVSGVLVDGGNLFDTTNGLRIKTWQGGS 343
Query: 321 GFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL 380
G +NI ++ M N I I D D + V+ + ++ GT + +
Sbjct: 344 GSAKNIKFQNIVMHNVTNPIIIDQYYCDSKDPCPEQESAVKVSNVAYMNIRGTSASEVAV 403
Query: 381 -IQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDV 415
K+SP G + NINL G G + + CS++
Sbjct: 404 KFDCSKSSPCQGYIVGNINLVGNGGKET-TMSCSNI 438
>sp|O23147|ADPG1_ARATH Polygalacturonase ADPG1 OS=Arabidopsis thaliana GN=ADPG1 PE=2 SV=1
Length = 431
Score = 105 bits (263), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 168/376 (44%), Gaps = 46/376 (12%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
+S+++FG GDGKT +T+AF++A + +G T VP G YL
Sbjct: 68 VSVSNFGAKGDGKTDDTQAFKKAWKKA--CSTNGVTTFLVPKG-------------KTYL 112
Query: 99 AKGAVIKA-TQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDV----VITGENGT 153
K + + N+ ++ L + + + Y H L+DV + G G
Sbjct: 113 LKSTRFRGPCKSLRNFQILGTLSASTKRSD-----YKDKNHWLILEDVNNLSIDGGSTGI 167
Query: 154 IDGQGAIWW-NMWR-QRTLPFTR-PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVV 210
I+G G WW N + ++ P T+ P + N +++ + N+ +N+ I C+ V
Sbjct: 168 INGNGKTWWQNSCKIDKSKPCTKAPTALTLYNLKNLNVKNLRVKNAQQIQISIEKCNKVE 227
Query: 211 IRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGI 270
+ V I AP DSPNTDGI ++ N+ + +S I TGDD ++++ G + +
Sbjct: 228 VSNVEITAPGDSPNTDGIHITNTQNIRVSNSDIGTGDDCISIEDG-----------TQNL 276
Query: 271 TIRRVTGSSPFSGIAVGS----ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNI 326
I +T P GI++GS + V + + G+ +KT G G +NI
Sbjct: 277 QIFDLT-CGPGHGISIGSLGDDNSKAYVSGINVDGAKFSESDNGVRIKTYQGGSGTAKNI 335
Query: 327 TVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL-IQGLK 385
++ MEN + I I D D + +A+ V N + K++ GT + + +
Sbjct: 336 KFQNIRMENVKNPIIIDQDYCDKDKCEDQESAVQVKN-VVYKNISGTSATDVAITLNCSE 394
Query: 386 NSPFTGICLSNINLQG 401
P GI L N+ ++G
Sbjct: 395 KYPCQGIVLENVKIKG 410
>sp|Q7M1E7|PGLR2_CHAOB Polygalacturonase OS=Chamaecyparis obtusa PE=1 SV=1
Length = 514
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 163/395 (41%), Gaps = 48/395 (12%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGS--FNLTSHMTL 96
++ +G VGDGK +T+AF A +++ LL + + F L
Sbjct: 59 FNVEQYGAVGDGKHDSTEAF--ATTWNAACKKASAVLLVPANKKFFVNNLVFRGPCQPHL 116
Query: 97 YLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDG 156
I A D W + ++ F L D + G G IDG
Sbjct: 117 SFKVDGTIVAQPDPARW--------------KNSKIWLQFAQ---LTDFNLMG-TGVIDG 158
Query: 157 QGAIWW----NMWRQRTL--PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVV 210
QG WW + RT+ RP I+ S+S+ + + NSP +++ C V
Sbjct: 159 QGQQWWAGQCKVVNGRTVCNDRNRPTAIKIDYSKSVTVKELTLMNSPEFHLVFGECEGVK 218
Query: 211 IRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGI 270
I+ + I AP DSPNTDGID +S IE I TGDD +A+ +G SS I
Sbjct: 219 IQGLKIKAPRDSPNTDGIDIFASKRFHIEKCVIGTGDDCIAIGTG-----------SSNI 267
Query: 271 TIRRVTGSSPFSGIAVGS----ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNI 326
TI+ + P GI++GS + V +V + G+ +KT G G I
Sbjct: 268 TIKDLI-CGPGHGISIGSLGRDNSRAEVSHVHVNRAKFIDTQNGLRIKTWQGGSGLASYI 326
Query: 327 TVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 386
T +V M N+ I I N + + G+T K++ GT + + +
Sbjct: 327 TYENVEMINSENPILINQFYCTSASACQNQRSAVQIQGVTYKNIHGTSATAAAIQLMCSD 386
Query: 387 S-PFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY 420
S P TGI LSN++L+ +G P C D + +
Sbjct: 387 SVPCTGIQLSNVSLKLTSG---KPASCVDKNARGF 418
>sp|P35336|PGLR_ACTDE Polygalacturonase OS=Actinidia deliciosa PE=2 SV=1
Length = 467
Score = 102 bits (253), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 169/388 (43%), Gaps = 43/388 (11%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTG--SFNLTSHMTL 96
+++ DFG GDG+ +TKAF +A ++ S LL VP YL SF+ L
Sbjct: 90 VNVDDFGAKGDGRD-DTKAFEKA-WKAACSSTSSAVLL-VPKKNYLVRPISFSGPCKSGL 146
Query: 97 YLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDG 156
+ I+A+ D R R GR+ ++ D +Q++ + G GTI+G
Sbjct: 147 TMQIYGTIEASDD--------------RSDYRKDGRH--WLVFDSVQNLRVEG-GGTING 189
Query: 157 QGAIWW--NMWRQRTLPFT-RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRY 213
G IWW + + LP P + F S+ +I+ N+ +N+ ++ C NV
Sbjct: 190 NGKIWWQNSCKTNKALPCKDAPTALTFYKSKHVIVKNLKIENAQQIHVSFDNCVNVQASN 249
Query: 214 VTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIR 273
+ + AP +SPNTDGI + N+ I I TGDD +++ +G S + +
Sbjct: 250 LMVTAPENSPNTDGIHVTGTQNIHISSCVIGTGDDCISIVNG-----------SRKVRVN 298
Query: 274 RVTGSSPFSGIAVGS----ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVS 329
+T P GI++GS + V +V+ L G+ +KT G G NI
Sbjct: 299 DIT-CGPGHGISIGSLGYGNSEAHVSDVVVNGAKLCGTTNGVRIKTWQGGSGSASNIKFQ 357
Query: 330 DVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL-IQGLKNSP 388
+V M N I I + D ++ V + +++ GT + K P
Sbjct: 358 NVEMHNVENPIIIDQNYCDQDKPCQEQSSAVQVKNVVYQNIKGTCASNVAITFDCSKRFP 417
Query: 389 FTGICLSNINLQGVAGPTSPPLKCSDVS 416
GI L +++L+ G + L C++V
Sbjct: 418 CQGIVLEDVDLEIEGGAAAKAL-CNNVE 444
>sp|P27644|PGLR_RHIRD Polygalacturonase OS=Rhizobium radiobacter GN=pgl PE=2 SV=1
Length = 312
Score = 101 bits (252), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 102/210 (48%), Gaps = 14/210 (6%)
Query: 193 FQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAV 252
+N+ W IHP C ++ TI+AP DSPNTDG +P+S NV I S GDD +AV
Sbjct: 40 IRNAASWTIHPQGCEDLTAAASTIIAPHDSPNTDGFNPESCRNVMISGVRFSVGDDCIAV 99
Query: 253 KSGWDEYGIAYGH--PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVG 310
K+G H + GIT+R G+ +GSE SGGV +V E ++ G
Sbjct: 100 KAGKRGPDGEDDHLAETRGITVRHCLMQPGHGGLVIGSEMSGGVHDVTVEDCDMIGTDRG 159
Query: 311 IHVKTNIGR-GGFIRNITVSDVYMENARKGIKIAG----DVGDHPD--DKFNP----NAL 359
+ +KT GG + NIT+ V ++ + + D H D NP +
Sbjct: 160 LRLKTGARSGGGMVGNITMRRVLLDGVQTALSANAHYHCDADGHDDWVQSRNPAPVNDGT 219
Query: 360 PVVNGITIKDVWGTKV-QQSGLIQGLKNSP 388
P V+GIT++DV + +G+ GL + P
Sbjct: 220 PFVDGITVEDVEIRNLAHAAGVFLGLPDVP 249
>sp|P35338|PGLR2_MAIZE Exopolygalacturonase OS=Zea mays GN=PG9 PE=2 SV=1
Length = 410
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 174/398 (43%), Gaps = 61/398 (15%)
Query: 41 ITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAK 100
IT G G+GKT +TKA +EA +G + +P G +L G N T K
Sbjct: 43 ITKLGASGNGKTDSTKAVQEA--WASACGGTGKQTILIPKGDFLVGQLNFTGP-----CK 95
Query: 101 GAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAI 160
G V Q N L Y + G ++ + D L VITG+ G +DGQG
Sbjct: 96 GDV--TIQVDGNLLATTDLSQY-----KEHGNWIEILRVDNL---VITGK-GNLDGQGPA 144
Query: 161 WW--NMWRQRTLPFTRPN--LIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTI 216
W N ++ PN +++F+N+ + S V NS F++++ C N++I+ VT+
Sbjct: 145 VWSKNSCTKKYDCKILPNSLVMDFVNNGEV--SGVTLLNSKFFHMNMYQCKNMLIKDVTV 202
Query: 217 LAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVT 276
AP DSPNTDGI SS + I ++ I GDD +++ G + I +G+T
Sbjct: 203 TAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPGTSKVNI------TGVT----- 251
Query: 277 GSSPFSGIAVGS----ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVY 332
P GI++GS + V ++ + L G+ +K +TVS ++
Sbjct: 252 -CGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASV---LTVSKIH 307
Query: 333 MENARKGIKIAGDVGDHP---DDKFNPNALPVVNG--------ITIKDVWGTKVQQSGL- 380
EN IK+ +P D K+ PN L NG +T K++ GT +
Sbjct: 308 YEN----IKMEDSA--NPIFIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAIS 361
Query: 381 IQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGS 418
+ P TG + ++N++ C++ GS
Sbjct: 362 LLCTAKVPCTGATMDDVNVEYSGTNNKTMAICTNAKGS 399
>sp|P48978|PGLR_MALDO Polygalacturonase OS=Malus domestica PE=2 SV=1
Length = 460
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 167/379 (44%), Gaps = 55/379 (14%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLT----SHM 94
IS+ DFG G+G +T+AF +A SG +L VP YL + S +
Sbjct: 99 ISVDDFGAKGNGAD-DTQAFVKAWKAA--CSSSGAMVLVVPQKNYLVRPIEFSGPCKSQL 155
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
TL + I+A++D R + ++ F D +Q++++ G GTI
Sbjct: 156 TLQIY--GTIEASED--------------RSIYKDIDHWLIF---DNVQNLLVVGP-GTI 195
Query: 155 DGQGAIWW-NMWRQRTLP---FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVY--CSN 208
+G G IWW N + + P P + F ++++ N+ Q++ IH ++ C N
Sbjct: 196 NGNGNIWWKNSCKIKPQPPCGTYAPTAVTFNRCNNLVVKNLNIQDAQ--QIHVIFQNCIN 253
Query: 209 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 268
V +T+ AP DSPNTDGI ++ N+ I S I TGDD +++ SG S
Sbjct: 254 VQASCLTVTAPEDSPNTDGIHVTNTQNITISSSVIGTGDDCISIVSG-----------SQ 302
Query: 269 GITIRRVTGSSPFSGIAVGSETSGGVEN----VLAEHINLYNVGVGIHVKTNIGRGGFIR 324
+ +T P GI++GS G E+ V L G+ +KT G G
Sbjct: 303 RVQATDIT-CGPGHGISIGSLGEDGSEDHVSGVFVNGAKLSGTSNGLRIKTWKGGSGSAT 361
Query: 325 NITVSDVYMENARKGIKIAGDVGDH--PDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQ 382
NI +V M + I I + DH D K +A+ V N + +++ GT +
Sbjct: 362 NIVFQNVQMNDVTNPIIIDQNYCDHKTKDCKQQKSAVQVKN-VLYQNIRGTSASGDAITL 420
Query: 383 GLKNS-PFTGICLSNINLQ 400
S P GI L ++ LQ
Sbjct: 421 NCSQSVPCQGIVLQSVQLQ 439
>sp|P26216|PGLR1_MAIZE Exopolygalacturonase OS=Zea mays GN=PG1 PE=1 SV=1
Length = 410
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 175/398 (43%), Gaps = 61/398 (15%)
Query: 41 ITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAK 100
IT G G+GKT +TKA +EA +G + +P G +L G N T K
Sbjct: 43 ITKLGASGNGKTDSTKAVQEA--WASACGGTGKQTILIPKGDFLVGQLNFTGP-----CK 95
Query: 101 GAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAI 160
G V Q N L Y + G ++ + D L VITG+ G +DGQG
Sbjct: 96 GDV--TIQVDGNLLATTDLSQY-----KDHGNWIEILRVDNL---VITGK-GNLDGQGPA 144
Query: 161 WW--NMWRQRTLPFTRPN--LIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTI 216
W N ++ PN +++F+N+ + S V NS F++++ C +++I+ VT+
Sbjct: 145 VWSKNSCTKKYDCKILPNSLVMDFVNNGEV--SGVTLLNSKFFHMNMYRCKDMLIKDVTV 202
Query: 217 LAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVT 276
AP DSPNTDGI SS + I ++ I GDD +++ G + I +G+T
Sbjct: 203 TAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPGTSKVNI------TGVT----- 251
Query: 277 GSSPFSGIAVGS----ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVY 332
P GI++GS + V ++ + L G+ +K +TVS ++
Sbjct: 252 -CGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASV---LTVSKIH 307
Query: 333 MENARKGIKIAGDVGDHP---DDKFNPNALPVVNG--------ITIKDVWGTKVQQSGL- 380
EN IK+ +P D K+ PN L NG +T K++ GT +
Sbjct: 308 YEN----IKMEDSA--NPIFIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAVS 361
Query: 381 IQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGS 418
+ P TG+ + ++N++ C++ GS
Sbjct: 362 LLCTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNAKGS 399
>sp|P35339|PGLR3_MAIZE Exopolygalacturonase OS=Zea mays GN=PG2C PE=2 SV=1
Length = 410
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 110/399 (27%), Positives = 175/399 (43%), Gaps = 61/399 (15%)
Query: 41 ITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAK 100
IT G G+GKT +TKA +EA +G + +P G +L G N T K
Sbjct: 43 ITKLGASGNGKTDSTKAVQEA--WASACGGTGKQTILIPKGDFLVGPLNFTGP-----CK 95
Query: 101 GAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAI 160
G V Q N L Y + G ++ + D L VITG+ G +DGQG
Sbjct: 96 GDV--TIQVNGNLLATTDLSQY-----KDHGNWIEILRVDNL---VITGK-GKLDGQGPA 144
Query: 161 WW--NMWRQRTLPFTRPN--LIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTI 216
W N ++ PN +++F+N+ + S + NS F++++ C +++I+ V +
Sbjct: 145 VWSKNSCVKKYDCKILPNSLVMDFVNNGEV--SGITLLNSKFFHMNMYKCKDMLIKDVNV 202
Query: 217 LAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVT 276
AP DSPNTDGI SS V I ++ I GDD +++ G + I +G+T
Sbjct: 203 TAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGPGTSKVNI------TGVT----- 251
Query: 277 GSSPFSGIAVGS----ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVY 332
P GI++GS + V ++ + L G+ +K +T S ++
Sbjct: 252 -CGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAASV---LTASKIH 307
Query: 333 MENARKGIKIAGDVGDHP---DDKFNPNALPVVNG--------ITIKDVWGTKVQQSGL- 380
EN IK+ D G +P D K+ PN L NG +T K++ GT +
Sbjct: 308 YEN----IKME-DSG-YPIIIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAVN 361
Query: 381 IQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSA 419
+ P TG+ + ++N++ C + GSA
Sbjct: 362 LLCTAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNAKGSA 400
>sp|Q9SFB7|QRT2_ARATH Polygalacturonase QRT2 OS=Arabidopsis thaliana GN=QRT2 PE=1 SV=2
Length = 439
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 122/272 (44%), Gaps = 20/272 (7%)
Query: 152 GTIDGQGAIWW--NMWRQRTLP-FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 208
G IDG G IWW + LP P + F+ ++ +SN+ +N+ ++ C N
Sbjct: 167 GRIDGNGHIWWPKSCKINPQLPCLGAPTAVTFVECNNLRVSNIRLENAQQMHLTFQDCKN 226
Query: 209 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 268
V + + +PADSPNTDGI + N+ I+DS + TGDD +++ SG + ++
Sbjct: 227 VKALNLMVTSPADSPNTDGIHVSGTQNILIQDSIVRTGDDCISIVSGSENV------RAT 280
Query: 269 GITIRRVTGSSPFSGIAVGS----ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 324
GIT P GI++GS + V NV+ L G+ +KT G G +
Sbjct: 281 GIT------CGPGHGISIGSLGEDNSEAYVSNVVVNKATLIGTTNGVRIKTWQGGHGMAK 334
Query: 325 NITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL-IQG 383
NI D+ M+N I I D D + + V+ + K++ GT + +
Sbjct: 335 NIIFQDIIMKNVTNPIIINQDYCDRVEACPEQKSAVQVSNVLYKNIQGTSSRPIAVKFVC 394
Query: 384 LKNSPFTGICLSNINLQGVAGPTSPPLKCSDV 415
KN P GI + N+ L CS+V
Sbjct: 395 SKNIPCRGISMQNVKLVDQTQQDVSKASCSNV 426
>sp|P43212|PGLR2_CRYJA Polygalacturonase OS=Cryptomeria japonica PE=1 SV=1
Length = 514
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 121/431 (28%), Positives = 179/431 (41%), Gaps = 63/431 (14%)
Query: 35 RNDKISI---TDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGS---F 88
R+D I+I +G VGDGK T+AF A Q + +L VP + F
Sbjct: 52 RHDAINIFNVEKYGAVGDGKHDCTEAFSTAW---QAACKKPSAMLLVPGNKKFVVNNLFF 108
Query: 89 NLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVIT 148
N +I A Q+ +W + ++ F G +
Sbjct: 109 NGPCQPHFTFKVDGIIAAYQNPASW--------------KNNRIWLQFAKLTGF---TLM 151
Query: 149 GENGTIDGQGAIWWN---MW---RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIH 202
G+ G IDGQG WW W R+ RP I+F S +II + NSP +++
Sbjct: 152 GK-GVIDGQGKQWWAGQCKWVNGREICNDRDRPTAIKFDFSTGLIIQGLKLMNSPEFHLV 210
Query: 203 PVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA 262
C V I ++I AP DSPNTDGID +S N ++ + I TGDD VA+ +G
Sbjct: 211 FGNCEGVKIIGISITAPRDSPNTDGIDIFASKNFHLQKNTIGTGDDCVAIGTG------- 263
Query: 263 YGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAE----HIN---LYNVGVGIHVKT 315
SS I I + P GI++GS G EN AE H+N + G+ +KT
Sbjct: 264 ----SSNIVIEDLI-CGPGHGISIGSL---GRENSRAEVSYVHVNGAKFIDTQNGLRIKT 315
Query: 316 NIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKV 375
G G +I +V M N+ I I N + + +T K++ GT
Sbjct: 316 WQGGSGMASHIIYENVEMINSENPILINQFYCTSASACQNQRSAVQIQDVTYKNIRGTSA 375
Query: 376 QQSGLIQGLKNS-PFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY---QVKPWPCSELS 431
+ + +S P I LS+I+L+ +G + C + + + Y V P C LS
Sbjct: 376 TAAAIQLKCSDSMPCKDIKLSDISLKLTSGKIA---SCLNDNANGYFSGHVIP-ACKNLS 431
Query: 432 SSQQTGACSNH 442
S + +H
Sbjct: 432 PSAKRKESKSH 442
>sp|Q9FY19|PGLR2_JUNAS Polygalacturonase OS=Juniperus ashei GN=JNA2 PE=1 SV=1
Length = 507
Score = 95.5 bits (236), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 136/300 (45%), Gaps = 27/300 (9%)
Query: 136 FIHGDGLQDVVITGENGTIDGQGAIWWNMWRQ----RTLPFT--RPNLIEFMNSRSIIIS 189
++H L D + G G IDGQG WW+ + RT+ RP I+ S+S+ +
Sbjct: 140 WMHFARLTDFNLMG-TGVIDGQGNRWWSDQCKTINGRTVCNDKGRPTAIKIDFSKSVTVK 198
Query: 190 NVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDL 249
+ NSP +++ C V I+ + I AP DSPNTDGID +S IE I TGDD
Sbjct: 199 ELTLTNSPEFHLVFGECDGVKIQGIKIKAPRDSPNTDGIDIFASKRFEIEKCTIGTGDDC 258
Query: 250 VAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG----VENVLAEHINLY 305
VAV +G SS ITI+ +T P G+++GS G V V +
Sbjct: 259 VAVGTG-----------SSNITIKDLT-CGPGHGMSIGSLGKGNSRSEVSFVHLDGAKFI 306
Query: 306 NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGI 365
+ G+ +KT G G +IT +V M NA I I N + + +
Sbjct: 307 DTQNGLRIKTWQGGSGLASHITYENVEMINAENPILINQFYCTSAAACKNQRSAVKIQDV 366
Query: 366 TIKDVWGTKVQQSGLIQGLKNS-PFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKP 424
T K++ GT + + +S P + I LSN+ L+ +G + C + + + Y P
Sbjct: 367 TFKNIHGTSATTAAIQLMCSDSVPCSNIKLSNVFLKLTSGKVA---TCVNKNANGYYTNP 423
>sp|P18192|PGLR1_PECCC Endo-polygalacturonase OS=Pectobacterium carotovorum subsp.
carotovorum GN=peh PE=3 SV=1
Length = 402
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/305 (31%), Positives = 142/305 (46%), Gaps = 38/305 (12%)
Query: 82 VYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDG 141
V+L+G +L S ++L + KG ++A N PS + G +FI
Sbjct: 77 VFLSGPLSLPSGVSLLIDKGVTLRAVN---NAKSFENAPSSCGVVDTNGKGCDAFITATS 133
Query: 142 LQDVVITGENGTIDGQGAI--------WWNMW---RQRTLPFTRPNLIEFMNSRSIIISN 190
+ I G GTIDGQG + WW++ + + L P LI+ S++ + N
Sbjct: 134 TTNSGIYGP-GTIDGQGGVKLQDKKVSWWDLAADAKVKKLKQNTPRLIQINKSKNFTLYN 192
Query: 191 VIFQNSPFWNIHPVYCSN--VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDD 248
V NSP N H V+ TI P+ + NTDGIDP SS N+ I S ISTGDD
Sbjct: 193 VSLINSP--NFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAHSNISTGDD 250
Query: 249 LVAVKS--GWDE-YGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLY 305
VA+K+ G E I+ H G TG G+++GSET GV NV + + +
Sbjct: 251 NVAIKAYKGRSETRNISILHNEFG------TG----HGMSIGSETM-GVYNVTVDDLIMT 299
Query: 306 NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGI 365
G+ +K++ G + + S+V M+N K I I D +K + +P + I
Sbjct: 300 GTTNGLRIKSDKSAAGVVNGVRYSNVVMKNVAKPIVI-----DTVYEKKEGSNVPDWSDI 354
Query: 366 TIKDV 370
T KD+
Sbjct: 355 TFKDI 359
>sp|P26509|PGLR2_PECSS Endo-polygalacturonase OS=Pectobacterium sp. (strain SCC3193)
GN=pehA PE=1 SV=1
Length = 402
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 141/305 (46%), Gaps = 38/305 (12%)
Query: 82 VYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDG 141
V+L+G +L S ++L + KG ++A N PS ++ G +FI
Sbjct: 77 VFLSGPLSLPSGVSLLIDKGVTLRAVN---NAKSFENAPSSCGVVDKNGKGCDAFITAVS 133
Query: 142 LQDVVITGENGTIDGQGAI--------WWNMW---RQRTLPFTRPNLIEFMNSRSIIISN 190
+ I G GTIDGQG + WW + + + L P LI+ S++ + N
Sbjct: 134 TTNSGIYGP-GTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTPRLIQINKSKNFTLYN 192
Query: 191 VIFQNSPFWNIHPVYCSN--VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDD 248
V NSP N H V+ TI P+ + NTDGIDP SS N+ I S I+TGDD
Sbjct: 193 VSLINSP--NFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATGDD 250
Query: 249 LVAVKS---GWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLY 305
VA+K+ + I+ H G TG G+++GSET GV NV + + +
Sbjct: 251 NVAIKAYKGRAETRNISILHNDFG------TG----HGMSIGSETM-GVYNVTVDDLKMN 299
Query: 306 NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGI 365
G+ +K++ G + + S+V M+N K I I D +K + +P + I
Sbjct: 300 GTTNGLRIKSDKSAAGVVNGVRYSNVVMKNVAKPIVI-----DTVYEKKEGSNVPDWSDI 354
Query: 366 TIKDV 370
T KDV
Sbjct: 355 TFKDV 359
>sp|Q949Z1|PGLR4_ARATH Polygalacturonase At1g48100 OS=Arabidopsis thaliana GN=At1g48100
PE=2 SV=1
Length = 475
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 141/324 (43%), Gaps = 54/324 (16%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHM---- 94
+T FG VGDG +T AF++A ++ SG ++ P G G F +TS +
Sbjct: 80 FDVTSFGAVGDGSCDDTAAFQDA-WKAACAVESG--VVLAPEG----GVFKITSTIFSGP 132
Query: 95 ---TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGEN 151
L V+ WP + +++ F DG +G+
Sbjct: 133 CKPGLVFQLDGVLMPPDGPEEWP-----------EKDNKNQWLVFYRLDGF---TFSGK- 177
Query: 152 GTIDGQGAIWWNM---------WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIH 202
GT++G G WW++ + P P +I F S +I + + QNSP +++
Sbjct: 178 GTVEGNGQKWWDLPCKPHRGPDGSSSSGPCASPTMIRFFMSNNIEVKGLRIQNSPQFHMK 237
Query: 203 PVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA 262
C V+I + I +P SPNTDGI ++ +V I +S +S GDD +++ +G
Sbjct: 238 FDGCQGVLINEIQISSPKLSPNTDGIHLGNTRSVGIYNSVVSNGDDCISIGTG------- 290
Query: 263 YGHPSSGITIRRVTGSSPFSGIAVGS----ETSGGVENVLAEHINLYNVGVGIHVKTNIG 318
S + I+ VT P GI++GS + V N+ + + + G+ VKT G
Sbjct: 291 ----CSDVDIQGVT-CGPSHGISIGSLGVHNSQACVSNITVRNTVIRDSDNGLRVKTWQG 345
Query: 319 RGGFIRNITVSDVYMENARKGIKI 342
G + N+ ++ MEN I +
Sbjct: 346 GTGSVSNLLFENIQMENVLNCIIV 369
>sp|O22818|PGLR6_ARATH Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana
GN=At2g43860 PE=2 SV=1
Length = 405
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 111/402 (27%), Positives = 171/402 (42%), Gaps = 50/402 (12%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSF----NLTSHM 94
+++ +G DG +TKAF A + + + T + VP G +L G+ N
Sbjct: 33 LNVLSYGAKPDGSKDSTKAFLAA-WDVA-CASANPTTIIVPKGRFLVGNLVFHGNECKQA 90
Query: 95 TLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTI 154
+ + I A +D + +IA + I + + DV I G G +
Sbjct: 91 PISIRIAGSIVAPED---FRIIASSKHW--------------IWFEDVTDVSIYG--GIL 131
Query: 155 DGQGAIWWNMWRQ--RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIR 212
D QG W P +L+ F S +I IS + NS ++I +NV I
Sbjct: 132 DAQGTSLWKCKNNGGHNCPTGAKSLV-FSGSNNIKISGLTSINSQKFHIVIDNSNNVNID 190
Query: 213 YVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITI 272
V + A +SPNTDGI +SS +V I +S I TGDD +++ G I TI
Sbjct: 191 GVKVSADENSPNTDGIHVESSHSVHITNSRIGTGDDCISIGPGSTNVFIQ--------TI 242
Query: 273 RRVTGSSPFSGIAVGS----ETSGGVENVLAEHINLYNVGVGIHVKT-NIGRGGFIRNIT 327
R P GI++GS E GV+NV +++ G+ +KT F RNI
Sbjct: 243 R----CGPGHGISIGSLGRAEEEQGVDNVTVSNVDFMGTNNGVRIKTWGKDSNSFARNIV 298
Query: 328 VSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGT-KVQQSGLIQGLKN 386
+ M+ + I I H + + V N + +D+ GT + + L+ K
Sbjct: 299 FQHINMKMVKNPIIIDQHYCLHKPCPKQESGVKVSN-VRYEDIHGTSNTEVAVLLDCSKE 357
Query: 387 SPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPW-PC 427
P TGI + ++NL V P C + +GSA V P+ PC
Sbjct: 358 KPCTGIVMDDVNLVSVHRPAQA--SCDNANGSANDVVPFTPC 397
>sp|Q94AJ5|PGLR5_ARATH Probable polygalacturonase At1g80170 OS=Arabidopsis thaliana
GN=At1g80170 PE=1 SV=1
Length = 444
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 106/437 (24%), Positives = 183/437 (41%), Gaps = 64/437 (14%)
Query: 33 RYRNDKI-SITDFGGVGDGKTLNTKAFREA-------IYRIQHLRRSGGTLLYVPPGVYL 84
R R++++ + +FG G+G T +TKAF +A + + L T L P + L
Sbjct: 46 RPRSERLLHVGNFGAKGNGVTDDTKAFADAWKTACSSKVKTRILVPENYTCLLRP--IDL 103
Query: 85 TGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQD 144
+G + +TL ++ + D W G R + +++ GL
Sbjct: 104 SGP--CKARLTLQISGTIIAPNDPDVWE----------GLNRRK-------WLYFHGLSR 144
Query: 145 VVITGENGTIDGQGAIWWNMWRQRTLPFTR-------PNLIEFMNSRSIIISNVIFQNSP 197
+ + G GT++G G WW +R+ P + F +++ + N+ +S
Sbjct: 145 LTVEG-GGTVNGMGQEWW----ERSCKHNHSNPCRGAPTALTFHKCKNMRVENLNVIDSQ 199
Query: 198 FWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWD 257
+I C V I + ++APA SPNTDGI S + I+++ +STGDD +++
Sbjct: 200 QMHIALTSCRRVTISGLKVIAPATSPNTDGIHISVSRGIVIDNTTVSTGDDCISIVKN-- 257
Query: 258 EYGIAYGHPSSGITIRRVTGSSPFSGIAVG----SETSGGVENVLAEHINLYNVGVGIHV 313
S+ I+I + P GI++G S++ V ++ + + + G+ +
Sbjct: 258 ---------STQISISNII-CGPGHGISIGSLGKSKSWEEVRDITVDTAIISDTANGVRI 307
Query: 314 KTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGT 373
KT G G + I ++ M N I I D N + + I+ V GT
Sbjct: 308 KTWQGGSGLVSKIIFRNIKMNNVSNPIIIDQYYCDSRKPCANQTSAISIENISFVHVRGT 367
Query: 374 KVQQSGL-IQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPC---- 427
+ + I +SP I L +I+L+ G C + GS+ QV P PC
Sbjct: 368 SASKEAIKISCSDSSPCRNILLQDIDLEPSNGDGFTESFCWEAYGSSSGQVYPPPCLSDD 427
Query: 428 -SELSSSQQTGACSNHF 443
S L S Q+G S +
Sbjct: 428 TSFLEQSVQSGITSAYL 444
>sp|P49062|PGLR1_ARATH Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana GN=PGA3
PE=2 SV=1
Length = 422
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 163/371 (43%), Gaps = 52/371 (14%)
Query: 41 ITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAK 100
IT FG VGDG T KAF IQ L VP G +L G + A
Sbjct: 54 ITKFGAVGDGSTNTFKAFLNT--WIQVCDSPVPATLLVPKGTFLAGP--------VIFAG 103
Query: 101 GAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAI 160
K T + +I + + G P + F D L V+TG GT G+G
Sbjct: 104 PCKSKVTVN-----VIGTIIATTSGYATP--EWFLFERVDNL---VLTGT-GTFHGKGEA 152
Query: 161 WWNM-----WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVT 215
W Q LP P ++F N +++ I+ + N+ +++ V NV I+ +
Sbjct: 153 VWKADGCGKKVQCNLP---PTSLKFRNMKNVEINGISSVNAKAFHMFLVKTENVNIQNIK 209
Query: 216 ILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRV 275
+ APA+SPNTDGI ++ NV I DS I+TGDD V+V G S+ +T+ RV
Sbjct: 210 LTAPAESPNTDGIHLSNADNVSILDSTIATGDDCVSV-----------GRGSNNVTVERV 258
Query: 276 TGSSPFSGIAVGSETS-GGVENVLAEHIN---LYNVGVGIHVKTNIGRG-GFIRNITVSD 330
P G++VGS E+V H+N + G+ +KT G +I +
Sbjct: 259 I-CGPGHGLSVGSLGKYKNEEDVSGIHVNNCTMIETDNGLRIKTWGGSDPSKAVDIKFEN 317
Query: 331 VYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL-IQGLKNSPF 389
+ M++ + I I + G D + ++ I K++ GT + + + I K+ P
Sbjct: 318 IIMQSVKNPIIIDQNYGSRGGD-----SQVAISDILFKNIRGTTITKDVVQIMCSKSVPC 372
Query: 390 TGICLSNINLQ 400
G+ + ++NL
Sbjct: 373 QGVNVVDVNLD 383
>sp|P05117|PGLR_SOLLC Polygalacturonase-2 OS=Solanum lycopersicum GN=PG2 PE=1 SV=1
Length = 457
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 178/414 (42%), Gaps = 42/414 (10%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
I++ FG GDGKT + AF +A R + +V P YL
Sbjct: 76 INVLSFGAKGDGKTYDNIAFEQAWNEACSSRTP---VQFVVP------------KNKNYL 120
Query: 99 AKGAVIKA-TQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQ 157
K + + + + L + + + R +I D +Q++V+ G GTI+G
Sbjct: 121 LKQITFSGPCRSSISVKIFGSLEASSKISDYKDRRL--WIAFDSVQNLVVGGG-GTINGN 177
Query: 158 GAIWW--NMWRQRTLPF-TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 214
G +WW + ++LP P + F N +++ ++N+ +N+ +I C+NVV +
Sbjct: 178 GQVWWPSSCKINKSLPCRDAPTALTFWNCKNLKVNNLKSKNAQQIHIKFESCTNVVASNL 237
Query: 215 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 274
I A A SPNTDG+ ++ + I D+ I TGDD +++ SG S +
Sbjct: 238 MINASAKSPNTDGVHVSNTQYIQISDTIIGTGDDCISIVSG-----------SQNVQATN 286
Query: 275 VTGSSPFSGIAVGSETSGGVE----NVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSD 330
+T P GI++GS SG E NV + G+ +KT G G NI +
Sbjct: 287 IT-CGPGHGISIGSLGSGNSEAYVSNVTVNEAKIIGAENGVRIKTWQGGSGQASNIKFLN 345
Query: 331 VYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL-IQGLKNSPF 389
V M++ + I I + D + + V + +++ GT + + N P
Sbjct: 346 VEMQDVKYPIIIDQNYCDRVEPCIQQFSAVQVKNVVYENIKGTSATKVAIKFDCSTNFPC 405
Query: 390 TGICLSNINLQGVAGPTSPPLKCSDVS-GSAYQVKPWPCSELSSSQQTGACSNH 442
GI + NINL G +G S C +V +A V P C+ L S+ N+
Sbjct: 406 EGIIMENINLVGESGKPSEAT-CKNVHFNNAEHVTP-HCTSLEISEDEALLYNY 457
>sp|Q39766|PGLR_GOSBA Polygalacturonase OS=Gossypium barbadense GN=G9 PE=2 SV=1
Length = 407
Score = 82.4 bits (202), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 166/407 (40%), Gaps = 61/407 (14%)
Query: 41 ITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAK 100
+ FG DGKT +K F +A + + + +P G YL NL
Sbjct: 32 VAKFGAKADGKTDLSKPFLDAWK--EACASVTPSTVVIPKGTYLLSKVNLEG-------- 81
Query: 101 GAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSF-----IHGDGLQDVVITGENGTID 155
P AP+ +G + +F + +++ + G G D
Sbjct: 82 -------------PCKAPIEINVQGTIQAPADPSAFKDPNWVRFYSVENFKMFG-GGIFD 127
Query: 156 GQGAIWW--NMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRY 213
GQG+I + N R P I F + +I ++ ++S ++I+ C N+ +
Sbjct: 128 GQGSIAYEKNTCENREFRSKLPVNIRFDFVTNALIQDITSKDSKLFHINVFACKNITLER 187
Query: 214 VTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIR 273
+ I AP +SPNTDGI S V I S I TGDD +++ G + + I+
Sbjct: 188 LKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDG-----------TKNMVIK 236
Query: 274 RVTGSSPFSGIAVGS----ETSGGVENVLAEHINLYNVGVGIHVKTNIGR-GGFIRNITV 328
+T P GI++GS + VE + + + N G +KT G GG + I
Sbjct: 237 EIT-CGPGHGISIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEHGGAVSEIHF 295
Query: 329 SDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLK--- 385
D+ M N I I K N + ++ I+ K++ GT S L + +K
Sbjct: 296 EDITMNNVSSPILIDQQYCPWNKCKKNEESKVKLSNISFKNIRGT----SALPEAIKFIC 351
Query: 386 --NSPFTGICLSNINLQ--GVAGPTSPPLKCSDVSGSAYQVKPWPCS 428
+SP + L++I++Q G TS L + + ++ P PCS
Sbjct: 352 SGSSPCQNVELADIDIQHNGAEPATSQCLNVKPI--TIGKLNPIPCS 396
>sp|Q39786|PGLR_GOSHI Polygalacturonase OS=Gossypium hirsutum GN=G9 PE=2 SV=1
Length = 407
Score = 82.4 bits (202), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 166/407 (40%), Gaps = 61/407 (14%)
Query: 41 ITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAK 100
+ FG DGKT +K F +A + + + +P G YL NL
Sbjct: 32 VAKFGAKADGKTDLSKPFLDAWK--EACASVTPSTVVIPKGTYLLSKVNLEG-------- 81
Query: 101 GAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSF-----IHGDGLQDVVITGENGTID 155
P AP+ +G + +F + +++ + G G D
Sbjct: 82 -------------PCKAPIEINVQGTIQAPADPSAFKDPNWVRFYSVENFKMFG-GGIFD 127
Query: 156 GQGAIWW--NMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRY 213
GQG+I + N R P I F + +I ++ ++S ++I+ C N+ +
Sbjct: 128 GQGSIAYEKNTCENREFRSKLPVNIRFDFLTNALIQDITSKDSKLFHINVFACKNITLER 187
Query: 214 VTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIR 273
+ I AP +SPNTDGI S V I S I TGDD +++ G + + I+
Sbjct: 188 LKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDG-----------TKNMVIK 236
Query: 274 RVTGSSPFSGIAVGS----ETSGGVENVLAEHINLYNVGVGIHVKTNIGR-GGFIRNITV 328
+T P GI++GS + VE + + + N G +KT G GG + I
Sbjct: 237 EIT-CGPGHGISIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEHGGAVSEIHF 295
Query: 329 SDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLK--- 385
D+ M N I I K N + ++ I+ K++ GT S L + +K
Sbjct: 296 EDITMNNVSSPILIDQQYCPWNKCKKNEESKVKLSNISFKNIRGT----SALPEAIKFIC 351
Query: 386 --NSPFTGICLSNINLQ--GVAGPTSPPLKCSDVSGSAYQVKPWPCS 428
+SP + L++I+++ G TS L ++ ++ P PCS
Sbjct: 352 SGSSPCQNVELADIDIKHNGAEPATSQCLNVKPITSG--KLNPIPCS 396
>sp|P48979|PGLR_PRUPE Polygalacturonase OS=Prunus persica PE=2 SV=1
Length = 393
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 167/394 (42%), Gaps = 75/394 (19%)
Query: 3 RFLVTLSILLSYFNCFSLASVVTCSGIVPMRYRNDKISITDFGGVGDGKTLNTKAFREAI 62
R L +LS++ + ++AS P+ Y ++ G DGKT +TKAF A
Sbjct: 5 RSLFSLSLIFVFMINSAIAS--------PLTY-----NVASLGAKADGKTDSTKAFLSAW 51
Query: 63 YRIQHLRRSGGTLLYVPPGVYLTGSFNLT-----SHMTLYLAKGAVIKATQDTWNWPLIA 117
+ G ++YVP G + + + +T +A L+A
Sbjct: 52 AKACASMNPG--VIYVPAGTFFLRDVVFSGPCKNNAITFRIAG-------------TLVA 96
Query: 118 PLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWW--NMWRQRTLPFTRP 175
P G ++ F H +G V I+G G +DGQG W + P +
Sbjct: 97 PSDYRVIGN---AANWIFFHHVNG---VTISG--GILDGQGTALWACKACHGESCP-SGA 147
Query: 176 NLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSN 235
+ F +S +I++S + NS ++I NV ++ V + +SPNTDGI SS
Sbjct: 148 TTLGFSDSNNIVVSGLASLNSQMFHIVINDFQNVQMQGVRVSRSGNSPNTDGIHVQMSSG 207
Query: 236 VCIEDSYISTGDDLVAVKSG----WDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS--- 288
V I +S I+TGDD V++ G W E G+A G P GI++GS
Sbjct: 208 VTILNSKIATGDDCVSIGPGTSNLWIE-GVACG---------------PGHGISIGSLGK 251
Query: 289 -ETSGGVENVLAEHINLYNVGVGIHVKTNIGR--GGFIRNITVSDVYMENARKGIKIAGD 345
+ GV+NV + + G+ +K+ GR GF RNI M N I I D
Sbjct: 252 EQEEAGVQNVTVKTVTFSGTQNGLRIKS-WGRPSTGFARNILFQHATMVNVENPIVI--D 308
Query: 346 VGDHPDDKFNPNALP--VVNGITIKDVWGTKVQQ 377
PD+K P + ++ +T +D+ GT +
Sbjct: 309 QHYCPDNKGCPGQVSGVQISDVTYEDIHGTSATE 342
>sp|P20041|PGLR_RALSL Polygalacturonase OS=Ralstonia solanacearum GN=pglA PE=1 SV=1
Length = 529
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 126/306 (41%), Gaps = 65/306 (21%)
Query: 83 YLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGL 142
+L+GS L S +TL++ G + A+++ ++ L + G + I
Sbjct: 101 FLSGSLKLKSGVTLWIDTGVTLFASRNPADYD--NGLGTCGTATTSNDKSCNALIVARDT 158
Query: 143 QDVVITGENGTIDGQGA------------IWWNMW---RQRTLPFTRPNLIEFMNSRSII 187
I G G IDG+G WW++ + + L P LI+ N +
Sbjct: 159 AGSGIVGA-GAIDGRGGSLVTSGPNANRLTWWDIAYLNKTKGLNQQNPRLIQTYNGSAFT 217
Query: 188 ISNVIFQNSPFWNIHPVYCSNVV----------------------------IRYVTILAP 219
+ V QNSP ++I S V + T P
Sbjct: 218 LYGVTVQNSPNFHIVTTGTSGVTAWGIKIVTPSLAYAVAGYKCPSGSTPDKVTPATCFTP 277
Query: 220 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS 279
NTDG DP S+NV + SYI+TGDD VAVK+ SSG T + +
Sbjct: 278 ETVKNTDGFDPGQSTNVVLAYSYINTGDDHVAVKA------------SSGPTRNLLFAHN 325
Query: 280 PF---SGIAVGSETSGGVENVLAEHI----NLYNVGVGIHVKTNIGRGGFIRNITVSDVY 332
F G+++GSET+ GV N+L + N + G G+ +K++ RGG + NI +
Sbjct: 326 HFYYGHGLSIGSETNTGVSNMLVTDLTMDGNDSSAGNGLRIKSDASRGGKVTNIVYDGIC 385
Query: 333 MENARK 338
M N ++
Sbjct: 386 MRNVKE 391
>sp|P58598|PGLR_RALSO Polygalacturonase OS=Ralstonia solanacearum (strain GMI1000)
GN=pglA PE=3 SV=1
Length = 531
Score = 79.0 bits (193), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 95/216 (43%), Gaps = 50/216 (23%)
Query: 161 WWNMW---RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVV------- 210
WW++ + + L P L++ N + + V QNSP ++I + V
Sbjct: 190 WWDIAYLNKTKGLNQQNPRLVQLYNGSAFTLYRVTVQNSPNFHIVTTGTAGVTAWGIKIV 249
Query: 211 ---------------------IRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDL 249
+ T P NTDG DP S+NV + +SYISTGDD
Sbjct: 250 TPSLAYTVPGYKCAAGTTPDKVTPATCFTPETVKNTDGFDPGQSTNVVLANSYISTGDDH 309
Query: 250 VAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF---SGIAVGSETSGGVENV----LAEHI 302
VA+K+ S G T + + F G+++GSET GGV N+ LA
Sbjct: 310 VAIKA------------SGGATRNLLFAHNHFYYGHGLSIGSETDGGVSNMQVTDLAMDG 357
Query: 303 NLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK 338
N + G G+ +K++I RGG + NI + + M N ++
Sbjct: 358 NDSSGGNGLRIKSDISRGGKVNNIVYNGICMRNVKE 393
>sp|Q40312|PGLR_MEDSA Polygalacturonase OS=Medicago sativa PE=2 SV=1
Length = 421
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 176/402 (43%), Gaps = 71/402 (17%)
Query: 39 ISITDFGGVGD---GKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLT--SH 93
+ I+ FGG + G+ L T A+ EA + + +P G Y L
Sbjct: 25 LDISKFGGKPNSDIGQAL-TSAWNEACASTTAAK------IVIPAGTYQLNGIELKGPCK 77
Query: 94 MTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGT 153
+ L I+A D PS +G E+ + F++ D L ++G+ G
Sbjct: 78 APIELQVDGTIQAPAD----------PSVIKGTEQ----WFKFLYMDHL---TLSGK-GV 119
Query: 154 IDGQGAIWWNMWRQRTLPFT-----RPNLIEFMN-----SRSIIISNVIFQNSPFWNIHP 203
DGQGA + ++ P + N FMN + I+ V ++S +++
Sbjct: 120 FDGQGATVY----KKAAPASAWSGKNSNSKVFMNFGFNFVNNSIVRGVTSKDSKNFHVMV 175
Query: 204 VYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAY 263
C N+ TI AP DSPNTDGI S++V I ++ I TGDD V++ G
Sbjct: 176 FGCKNITFDGFTITAPGDSPNTDGIHMGKSTDVKILNTNIGTGDDCVSIGDG-------- 227
Query: 264 GHPSSGITIRRVTGSSPFSGIAVGS----ETSGGVENVLAEHINLYNVGVGIHVKTNIGR 319
S IT++ V P G++VGS T VE + ++ L G+ +KT
Sbjct: 228 ---SKQITVQGVN-CGPGHGLSVGSLGKFTTEENVEGITVKNCTLTATDNGVRIKTWPDA 283
Query: 320 GGFI--RNITVSDVYMENARKGIKIAGDVGDHP---DDKFNPNALPVVNGITIKDVWGTK 374
G I +I D+ M N + + I D +P K NP+ + ++ I+ K+V GT
Sbjct: 284 PGTITVSDIHFEDITMTNVKNPVII--DQEYYPWNQCSKKNPSKIK-LSKISFKNVKGTS 340
Query: 375 VQQSGLIQGLKNS-PFTGICLSNINLQGVAGPTSPPLKCSDV 415
G++ ++ P G+ L+N++L+ PT+ KC++V
Sbjct: 341 GTAEGVVLICSSAVPCDGVELNNVDLKFNGAPTT--AKCTNV 380
>sp|P15922|PEHX_ERWCH Exo-poly-alpha-D-galacturonosidase OS=Erwinia chrysanthemi GN=pehX
PE=1 SV=1
Length = 602
Score = 75.9 bits (185), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 106/435 (24%), Positives = 173/435 (39%), Gaps = 69/435 (15%)
Query: 39 ISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYL 98
I+IT +G GDG TLNT A ++AI G + VP GV+ TG+ L S MTL L
Sbjct: 152 INITQYGAKGDGTTLNTSAIQKAIDAC-----PTGCRIDVPAGVFKTGALWLKSDMTLNL 206
Query: 99 AKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 158
+GA + + + ++P + SY + RP + D V T +N I G+G
Sbjct: 207 LQGATLLGSDNAADYPDAYKIYSY-VSQVRPASLLNAI---DKNSSAVGTFKNIRIVGKG 262
Query: 159 AIWWNMWRQ---------RTLP------------------------------------FT 173
I N W++ TLP
Sbjct: 263 IIDGNGWKRSADAKDELGNTLPQYVKSDNSKVSKDGILAKNQVAAAVATGMDTKTAYSQR 322
Query: 174 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 233
R +L+ ++ I++V +N I + NVV V I ++ N DG++ +S
Sbjct: 323 RSSLVTLRGVQNAYIADVTIRNPANHGIMFLESENVVENSV-IHQTFNANNGDGVEFGNS 381
Query: 234 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 293
N+ + +S TGDD + +G + PS + + +GS T G
Sbjct: 382 QNIMVFNSVFDTGDDSINFAAGMGQ-DAQKQEPSQNAWLFNNFFRHGHGAVVLGSHTGAG 440
Query: 294 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-ARKGIKIAGDVGDHPDD 352
+ +VLAE+ + VG+ K+ GG I + M+N A++ + + D+
Sbjct: 441 IVDVLAENNVITQNDVGLRAKSAPAIGGGAHGIVFRNSAMKNLAKQAVIVTLSYADNNGT 500
Query: 353 -KFNPNALPV------VNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGP 405
+ P +P V +T++D G+ K+ + SN+ L GV+
Sbjct: 501 IDYTPAKVPARFYDFTVKNVTVQDSTGSNPAIEITGDSSKDIWHSQFIFSNMKLSGVS-- 558
Query: 406 TSPPLKCSDVSGSAY 420
P SD+S S +
Sbjct: 559 ---PTSISDLSDSQF 570
>sp|Q05967|PGLR_TOBAC Polygalacturonase OS=Nicotiana tabacum GN=PG1 PE=2 SV=1
Length = 396
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 120/265 (45%), Gaps = 27/265 (10%)
Query: 152 GTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVI 211
G +DGQ A W +Q PN + F + + I ++ +S ++++ C N+
Sbjct: 119 GILDGQAAAAWE-CKQSKKCNKLPNNLSFNSLTNSTIKDITTLDSKSFHVNVNQCKNLTF 177
Query: 212 RYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGIT 271
+ APA+SPNTDGI SS+V I DS STGDD ++V G + +
Sbjct: 178 IRFNVSAPANSPNTDGIHVSRSSSVNITDSNFSTGDDCISV-----------GDETEQLY 226
Query: 272 IRRVTGSSPFSGIAVGS----ETSGGVENVLAEHINLYNVGVGIHVKT-NIGRGGFIRNI 326
I RVT P GI+VGS V V + N G+ +KT G + ++
Sbjct: 227 ITRVT-CGPGHGISVGSLGGNPDEKPVVGVFVRNCTFTNTDNGVRIKTWPASHPGVVNDV 285
Query: 327 TVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPV---VNGITIKDVWGTKVQQSGL-IQ 382
D+ ++N + I D P +K N + LP ++ ++ +++ GT Q + +
Sbjct: 286 HFEDIIVQNVSNPVVI--DQVYCPFNKCNKD-LPSQVKISKVSFQNIKGTSRTQDAVSLL 342
Query: 383 GLKNSPFTGICLSNINL--QGVAGP 405
K P GI + +I++ G GP
Sbjct: 343 RSKGVPCEGIEVGDIDITYSGKEGP 367
>sp|P49063|PGLR2_ARATH Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana
GN=At3g07850 PE=1 SV=2
Length = 444
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 150/370 (40%), Gaps = 40/370 (10%)
Query: 73 GTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGR 132
G+ + VP G Y+ S KG V + P +P
Sbjct: 100 GSTITVPKGEYMVESLEFKGP-----CKGPVTLELNGNFKAPATVK-------TTKPHAG 147
Query: 133 YMSFIHGDGLQDVVITGENGTIDGQGAIWW--NMWRQRTLPFTRPNLIEFMNSRSIIISN 190
++ F + + D + G DGQG++ W N + + P I F + I++
Sbjct: 148 WIDF---ENIADFTLNGNKAIFDGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKINS 204
Query: 191 VIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLV 250
+ NS ++++ + C N+ + + I AP +S NTDGI S+ V + + I TGDD V
Sbjct: 205 ITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCV 264
Query: 251 AVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS----ETSGGVENVLAEHINLYN 306
++ G + I P GI++GS V+ V + N
Sbjct: 265 SIGDGTENL------------IVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKN 312
Query: 307 VGVGIHVKTNIGR-GGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGI 365
G+ +KT G G NI D+ M+N + I + + K + ++ +
Sbjct: 313 TDNGVRIKTWPGSPPGIASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSQVKLSDV 372
Query: 366 TIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINL--QGVAGPTSPPLKCSDVSG-SAYQ 421
TIK + GT + + + K P T I LS+INL G GP CS++ + +
Sbjct: 373 TIKGIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVS--ACSNIKPILSGK 430
Query: 422 VKPWPCSELS 431
+ P C+E++
Sbjct: 431 LVPAACTEVA 440
>sp|A1DLC1|PGLRX_NEOFI Probable exopolygalacturonase X OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=pgaX
PE=3 SV=2
Length = 432
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 136/311 (43%), Gaps = 46/311 (14%)
Query: 56 KAFREAIYRIQHLRRSGGTLLYVPPGVYLTG-SFNLTSHMTLYLAKGAVIKATQDTWNWP 114
K + I + H +GG +++ VY G + ++T + L I+ T DT W
Sbjct: 60 KDDSKNIMQALHKCNNGGKVVFDANKVYTVGTALDMTFLKHIDLEVLGKIQFTNDTDYWQ 119
Query: 115 LIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTR 174
S+ G + +F G QDV + G GT DG G +W++++ + L R
Sbjct: 120 A----HSFKHGFQNA----TTFFQLGG-QDVNVYG-GGTFDGNGQVWYDLYAEDAL-ILR 168
Query: 175 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL----APADSPNTDGIDP 230
P L + + I + + SP W S+V+ + I + ++ NTDG D
Sbjct: 169 PILFGIIGLKGGTIGPLKLRYSPQWYQLVANSSDVIFDGIDISGYSSSKNEAKNTDGWDT 228
Query: 231 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS-- 288
S N+ I++S I+ GDD V+ K P+S I + + GI+VGS
Sbjct: 229 YRSDNIVIQNSVINNGDDCVSFK------------PNSTNIIVQNLHCNGSHGISVGSLG 276
Query: 289 ETSGG---VENVLAEHINLYNVGVGIHVKT-----------NIGRGGF--IRNITVSDVY 332
+ G V+NVL +I++YN G +K G GG ++NIT + +Y
Sbjct: 277 QYKGEVDIVQNVLVYNISMYNASDGARIKVWPGVSSAMSEDLQGGGGLGSVKNITYNQMY 336
Query: 333 MENARKGIKIA 343
+EN I++
Sbjct: 337 IENVDWAIEVT 347
>sp|Q4WCZ8|PGLRX_ASPFU Probable exopolygalacturonase X OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=pgaX
PE=3 SV=2
Length = 432
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 137/311 (44%), Gaps = 46/311 (14%)
Query: 56 KAFREAIYRIQHLRRSGGTLLYVPPGVYLTGS-FNLTSHMTLYLAKGAVIKATQDTWNWP 114
K + I + H +GG +++ VY G+ ++T + L I+ T DT W
Sbjct: 60 KDDSKNIMKALHKCNNGGKVVFDANKVYTVGTALDMTFLKHIDLEVLGKIQFTNDTDYWQ 119
Query: 115 LIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTR 174
S+ G + +F G +DV + G GT+DG G +W++++ + L R
Sbjct: 120 A----NSFKHGFQNA----TTFFQLGG-EDVNVYG-GGTLDGNGQVWYDLYAEDAL-ILR 168
Query: 175 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL----APADSPNTDGIDP 230
P L + + I + + SP W S+V+ + I + ++ NTDG D
Sbjct: 169 PILFGVIGLKGGTIGPLKLRYSPQWYQLVANSSDVIFDGIDISGYSSSKNEAKNTDGWDT 228
Query: 231 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS-- 288
S N+ I++S I+ GDD V+ K P+S + + + GI+VGS
Sbjct: 229 YRSDNIVIQNSVINNGDDCVSFK------------PNSTNILVQNLHCNGSHGISVGSLG 276
Query: 289 ETSGG---VENVLAEHINLYNVGVGIHVKT-----------NIGRGGF--IRNITVSDVY 332
+ G V+NVL +I++YN G +K G GG ++N+T + +Y
Sbjct: 277 QYKGEVDIVQNVLVYNISMYNASDGARIKVWPGVSSAMSEDLQGGGGLGSVKNVTYNQMY 336
Query: 333 MENARKGIKIA 343
+EN I++
Sbjct: 337 IENVDWAIEVT 347
>sp|B0YDE8|PGLRX_ASPFC Probable exopolygalacturonase X OS=Neosartorya fumigata (strain
CEA10 / CBS 144.89 / FGSC A1163) GN=pgaX PE=3 SV=2
Length = 432
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 137/311 (44%), Gaps = 46/311 (14%)
Query: 56 KAFREAIYRIQHLRRSGGTLLYVPPGVYLTGS-FNLTSHMTLYLAKGAVIKATQDTWNWP 114
K + I + H +GG +++ VY G+ ++T + L I+ T DT W
Sbjct: 60 KDDSKNIMKALHKCNNGGKVVFDANKVYTVGTALDMTFLKHIDLEVLGKIQFTNDTDYWQ 119
Query: 115 LIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTR 174
S+ G + +F G +DV + G GT+DG G +W++++ + L R
Sbjct: 120 A----NSFKHGFQNA----TTFFQLGG-EDVNVYG-GGTLDGNGQVWYDLYAEDAL-ILR 168
Query: 175 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL----APADSPNTDGIDP 230
P L + + I + + SP W S+V+ + I + ++ NTDG D
Sbjct: 169 PILFGVIGLKGGTIGPLKLRYSPQWYQLVANSSDVIFDGIDISGYSSSKNEAKNTDGWDT 228
Query: 231 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS-- 288
S N+ I++S I+ GDD V+ K P+S + + + GI+VGS
Sbjct: 229 YRSDNIVIQNSVINNGDDCVSFK------------PNSTNILVQNLHCNGSHGISVGSLG 276
Query: 289 ETSGG---VENVLAEHINLYNVGVGIHVKT-----------NIGRGGF--IRNITVSDVY 332
+ G V+NVL +I++YN G +K G GG ++N+T + +Y
Sbjct: 277 QYKGEVDIVQNVLVYNISMYNASDGARIKVWPGVSSAMSEDLQGGGGLGSVKNVTYNQMY 336
Query: 333 MENARKGIKIA 343
+EN I++
Sbjct: 337 IENVDWAIEVT 347
>sp|Q27UB1|PGXB_ASPNG Exopolygalacturonase B OS=Aspergillus niger GN=pgxB PE=3 SV=1
Length = 438
Score = 65.9 bits (159), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 132/301 (43%), Gaps = 41/301 (13%)
Query: 141 GLQDVVITGENGTIDGQGAIWWNMWRQRTL----PFTRPNLIEFMNSRSIIISNVIFQNS 196
G QD+ I G G ++G G W++ + + + F RP L N+ I + + NS
Sbjct: 141 GGQDIKIFGS-GVLNGNGQKWYDEFAGKQILVYNTFYRPILFLTDNATRISVEGITQLNS 199
Query: 197 PFWN-----IHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 251
P W + V NV I + A +D NTDG+D V + I GDD +
Sbjct: 200 PCWTNFFVRTNDVSFDNVYIHAFSTNASSDPANTDGMDSLDVDGVSFTNMRIDVGDDCFS 259
Query: 252 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS--ETSGG---VENVLAEHINLYN 306
K P++ + + G+++GS + +G +ENV E++ L N
Sbjct: 260 PK------------PNTTNIFVQNMWCNNTHGVSMGSIGQYAGEMDIIENVYIENVTLLN 307
Query: 307 VGVGIHVKTNIGRG---GFIRNITVSDVYMENARKGIKIAG---DVGDHPDDKFNPNALP 360
G +K G+ G I N+T ++ ++N I + D+ K+ P+A+
Sbjct: 308 GQNGARLKAWAGQDVGYGRINNVTYKNIQIQNTDAPIVLDQCYFDINATECAKY-PSAVN 366
Query: 361 VVNGITIKDVWGTKVQQSG-LIQGLKNSP---FTGICLSNINLQGVAGPTSPPLKCSDVS 416
+ N I +++WG+ + G ++ L SP T I LSN+NL G + + C D+
Sbjct: 367 ITN-ILFENIWGSSSGKDGKIVADLVCSPDAVCTNITLSNVNLTSPKG--TAEIVCDDIQ 423
Query: 417 G 417
G
Sbjct: 424 G 424
>sp|A2QHG0|PGXB_ASPNC Probable exopolygalacturonase B OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=pgxB PE=3 SV=1
Length = 438
Score = 65.9 bits (159), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 132/301 (43%), Gaps = 41/301 (13%)
Query: 141 GLQDVVITGENGTIDGQGAIWWNMWRQRTL----PFTRPNLIEFMNSRSIIISNVIFQNS 196
G QD+ I G G ++G G W++ + + + F RP L N+ I + + NS
Sbjct: 141 GGQDIKIFGS-GVLNGNGQKWYDEFAGKQILVYNTFYRPILFLTDNATRISVEGITQLNS 199
Query: 197 PFWN-----IHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 251
P W + V NV I + A +D NTDG+D V + I GDD +
Sbjct: 200 PCWTNFFVRTNDVSFDNVYIHAFSTNASSDPANTDGMDSLDVDGVSFTNMRIDVGDDCFS 259
Query: 252 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS--ETSGG---VENVLAEHINLYN 306
K P++ + + G+++GS + +G +ENV E++ L N
Sbjct: 260 PK------------PNTTNIFVQNMWCNNTHGVSMGSIGQYAGEMDIIENVYIENVTLLN 307
Query: 307 VGVGIHVKTNIGRG---GFIRNITVSDVYMENARKGIKIAG---DVGDHPDDKFNPNALP 360
G +K G+ G I N+T ++ ++N I + D+ K+ P+A+
Sbjct: 308 GQNGARLKAWAGQDVGYGRINNVTYKNIQIQNTDAPIVLDQCYFDINATECAKY-PSAVN 366
Query: 361 VVNGITIKDVWGTKVQQSG-LIQGLKNSP---FTGICLSNINLQGVAGPTSPPLKCSDVS 416
+ N I +++WG+ + G ++ L SP T I LSN+NL G + + C D+
Sbjct: 367 ITN-ILFENIWGSSSGKDGKIVADLVCSPDAVCTNITLSNVNLTSPKG--TAEIVCDDIQ 423
Query: 417 G 417
G
Sbjct: 424 G 424
>sp|P47180|PGLR_YEAST Polygalacturonase OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PGU1 PE=1 SV=1
Length = 361
Score = 65.5 bits (158), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 113/240 (47%), Gaps = 29/240 (12%)
Query: 145 VVITGENG-TIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHP 203
+ + G +G TIDGQGA WW+ +P ++ + + ++ + +N+P
Sbjct: 95 ISVVGASGHTIDGQGAKWWDGLGDS--GKVKPKFVKLALTGTSKVTGLNIKNAPHQVFSI 152
Query: 204 VYCSNVVIRYVTI-LAPADSP---NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWD-E 258
CS++ I +TI + DS NTDG D SSSNV I+ + DD +AV SG +
Sbjct: 153 NKCSDLTISDITIDIRDGDSAGGHNTDGFDVGSSSNVLIQGCTVYNQDDCIAVNSGSTIK 212
Query: 259 YGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIG 318
+ Y + GI++ V G S + V AE+ ++ N G+ +KT G
Sbjct: 213 FMNNYCYNGHGISVGSVGGRSDNT-----------VNGFWAENNHVINSDNGLRIKTVEG 261
Query: 319 RGGFIRNITVSDVYMENARKGIKIAGDV--GDHPDDKFNPNA---LPVVNGITIKDVWGT 373
G + N+ ++ N GIK G V GD+ + K A +P+ N + +KD+ G+
Sbjct: 262 ATGTVTNVN----FISNKISGIKSYGIVIEGDYLNSKTTGTATGGVPISN-LVMKDITGS 316
>sp|Q0CGP0|PGLRX_ASPTN Probable exopolygalacturonase X OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=pgaX PE=3 SV=1
Length = 434
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 149/341 (43%), Gaps = 51/341 (14%)
Query: 60 EAIYRIQHLRR--SGGTLLYVPPGVYLTGS-FNLTSHMTLYLAKGAVIKATQDTWNWPLI 116
+A + + LR+ +GG +++ Y G+ ++T + L I+ T DT W
Sbjct: 62 DAAFVLSALRKCNNGGKVVFDADKEYTIGTALDMTFLRHVDLEILGRIQFTNDTDYWQAH 121
Query: 117 APLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPN 176
A R G + + G DV + G GT+DG G +W++++ L RP
Sbjct: 122 A---------FRHGFQNATTFFQLGGTDVNVYGS-GTLDGNGQVWYDLYAAEPLTL-RPI 170
Query: 177 LIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNT----DGIDPDS 232
L+ + I + + SP W ++V+ + I + S NT DG D
Sbjct: 171 LLGVIGLHGGTIGPLKLRYSPQWYQLVANSTDVLFDGIDISGYSSSKNTAKNTDGWDTYR 230
Query: 233 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS--ET 290
SSN+ I++S ++ GDD V+ K P+S + + + GI+VGS +
Sbjct: 231 SSNIVIQNSVVNNGDDCVSFK------------PNSTDILVQNMHCNGSHGISVGSLGQY 278
Query: 291 SGG---VENVLAEHINLYNV----------GVGIHVKTNI---GRGGFIRNITVSDVYME 334
G V+N+L +I++YN GV + ++ G G + NIT +Y+E
Sbjct: 279 KGEIDIVKNILVYNISMYNASDMARIKVWPGVDSALSEDLQGGGGSGAVSNITYDRMYIE 338
Query: 335 NARKGIKIAGDVGDHPDDKFN--PNALPVVNGITIKDVWGT 373
N I++ G N P+ L ++ + IK++WGT
Sbjct: 339 NVDWAIEVTQCYGQKNQTLCNQYPSNL-TISDVHIKNMWGT 378
>sp|Q6H9K0|PGLR2_PLAAC Exopolygalacturonase (Fragment) OS=Platanus acerifolia GN=plaa2
PE=1 SV=1
Length = 377
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 139/311 (44%), Gaps = 36/311 (11%)
Query: 133 YMSFIHGDGLQDVVITGENGTIDGQGAIWW---NMWRQRTLPFTRPNL-IEFMNSRSIII 188
++SF DGL ++G GT+DGQG W N + NL +F+ + ++
Sbjct: 88 WVSFYRIDGL---TVSGT-GTLDGQGQTAWAKNNCDKNPNCKHAAMNLRFDFL--KHAMV 141
Query: 189 SNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDD 248
++ NS ++I+ + C ++ ++VT+ AP S NTDGI S V I ++ I+TGDD
Sbjct: 142 RDITSLNSKMFHINVLECEDITFQHVTVTAPGTSINTDGIHVGISKGVTITNTKIATGDD 201
Query: 249 LVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS----ETSGGVENVLAEHINL 304
+++ G S +TI +V P GI++GS V + +
Sbjct: 202 CISIGPG-----------SQNVTITQVN-CGPGHGISIGSLGRYNNEKEVRGITVKGCTF 249
Query: 305 YNVGVGIHVKT-NIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD-DKFNPNALPVV 362
G+ VKT G ++T D+ M N + + + + + + P+ + +
Sbjct: 250 SGTMNGVRVKTWPNSPPGAATDLTFQDLTMNNVQNPVILDQEYCPYGQCSRQAPSRIKLS 309
Query: 363 NGITIKDVWGTKVQQSGLIQGLKNS-PFTGICLSNINL--QGVAGPTSPPLKCSDV--SG 417
N I ++ GT + ++ + P + + + INL +G GP + CS+V +
Sbjct: 310 N-INFNNIRGTSTGKVAVVIACSHGMPCSNMKIGEINLSYRGAGGPATS--TCSNVKPTF 366
Query: 418 SAYQVKPWPCS 428
S QV C+
Sbjct: 367 SGKQVPAIKCA 377
>sp|Q5ASG9|PGLX1_EMENI Exopolygalacturonase X-1 OS=Emericella nidulans (strain FGSC A4 /
ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=pgaX-1
PE=1 SV=1
Length = 434
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 142/333 (42%), Gaps = 45/333 (13%)
Query: 31 PMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTG-SFN 89
P+ Y + + + GDG+ + AF I +GG +++ Y G + +
Sbjct: 40 PLPYSHPRKKVCHVRSHGDGR--DDSAF---ILSALKSCNNGGKVVFAEEKEYTIGTALD 94
Query: 90 LTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITG 149
LT + L I+ T DT W + ++ +F G +DV + G
Sbjct: 95 LTFLKHVDLEILGRIQFTNDTDYWQANSFKHTFQNA--------TTFFQLGG-EDVNVYG 145
Query: 150 ENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNV 209
GT+DG G IW++++ + L RP L + I + + SP W S+V
Sbjct: 146 -GGTLDGNGQIWYDLYAEDPL-ILRPILFGVIGLHGGTIGPLKLRYSPQWYQLVANSSDV 203
Query: 210 VIRYVTI----LAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA--Y 263
+ + I + ++ NTDG D S N+ I++S I+ GDD V+ K E + Y
Sbjct: 204 LFDGIDISGYSKSENEAKNTDGWDTYRSKNIVIQNSVINNGDDCVSFKPNSTEILVQNLY 263
Query: 264 GHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNV----------GVGIHV 313
+ S GI++ + G +G V+NVL +I++YN GV +
Sbjct: 264 CNGSHGISVGSL-------GQYIGEVDI--VKNVLVYNISMYNASDMARIKVWPGVASAM 314
Query: 314 KTNIGRG---GFIRNITVSDVYMENARKGIKIA 343
++ G G + NIT D+Y+EN I+I
Sbjct: 315 SEDLQGGGGLGSVSNITYEDMYIENVDWAIEIT 347
>sp|B8NG16|PGLRX_ASPFN Probable exopolygalacturonase X OS=Aspergillus flavus (strain ATCC
200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167)
GN=pgaX PE=3 SV=1
Length = 433
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 121/268 (45%), Gaps = 44/268 (16%)
Query: 152 GTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVI 211
G ++G G +W++++ + L RP L+ + I + + SP W S+V+
Sbjct: 145 GELNGNGQVWYDLYAEDAL-ILRPILVGIIGLHGGTIGPLKLRYSPQWYQLVANSSDVLF 203
Query: 212 RYVTIL----APADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPS 267
+ I + ++ NTDG D SSN+ I++S I+ GDD V+ K P+
Sbjct: 204 DGIDISGYSSSENEAKNTDGWDTYRSSNIVIQNSVINNGDDCVSFK------------PN 251
Query: 268 SGITIRRVTGSSPFSGIAVGS--ETSGG---VENVLAEHINLYNV----------GVGIH 312
S + + + GI+VGS + G V+NVL +I++YN G+
Sbjct: 252 STEILVQNLHCNGSHGISVGSLGQYQGEVDIVQNVLVYNISMYNASDMARIKVWPGISSA 311
Query: 313 VKTNIGRG---GFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKD 369
+ ++ G G ++NIT +Y+EN I++ G N N + +TI D
Sbjct: 312 MSEDLQGGGGLGSVQNITYDKMYIENVDWAIEVTQCYGQKNQTLCNENP----SNLTISD 367
Query: 370 VWGTKVQQSGLIQGLKNSPFTG--ICLS 395
V+ + +G+ G KN P G IC S
Sbjct: 368 VYFNDL--TGVTSG-KNDPNVGTIICSS 392
>sp|Q27UB2|PGXA_ASPNG Exopolygalacturonase A OS=Aspergillus niger GN=pgxA PE=3 SV=1
Length = 434
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 112/258 (43%), Gaps = 36/258 (13%)
Query: 62 IYRIQHLRRSGGTLLYVPPGVYLTGS-FNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLP 120
I H +GGT+ ++PPG ++ + +LT + A I +D W A
Sbjct: 65 ILAAAHTCNNGGTV-FLPPGDFVVATALDLTFLNNIDFAIWGNITFKKDIDLWTTQAFQY 123
Query: 121 SYGRGRE--RPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLI 178
++ R GG ++ I+GDG G IDG G WW+ + + RP L+
Sbjct: 124 TFQTASLFWRFGGNNVN-IYGDG---------KGVIDGAGQYWWSAMAEDS-SVMRPCLL 172
Query: 179 EFMNSRSIIISNVIFQNSPFW-----NIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 233
IS + NSP W N + SN+ + + ++ A + NTDG D S
Sbjct: 173 GTDGLHHATISGLTMLNSPNWFNLIANSTDILISNMTMLVESEISDAPAKNTDGWDIYRS 232
Query: 234 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRV--TGSSPFSGIAVGSETS 291
SN+ I+DS I DD V+ K S+ I I+ + TGS GI+VGS
Sbjct: 233 SNIVIQDSRIVNTDDCVSFKPN-----------STQIVIQNLDCTGS---HGISVGSLGQ 278
Query: 292 GGVENVLAEHINLYNVGV 309
E + E + +YN+ +
Sbjct: 279 YQGETDIVEDLYIYNISM 296
>sp|A2QW66|PGXA_ASPNC Probable exopolygalacturonase A OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=pgxA PE=3 SV=1
Length = 434
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 112/258 (43%), Gaps = 36/258 (13%)
Query: 62 IYRIQHLRRSGGTLLYVPPGVYLTGS-FNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLP 120
I H +GGT+ ++PPG ++ + +LT + A I +D W A
Sbjct: 65 ILAAAHTCNNGGTV-FLPPGDFVVATALDLTFLNNIDFAIWGNITFKKDIDLWTTQAFQY 123
Query: 121 SYGRGRE--RPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLI 178
++ R GG ++ I+GDG G IDG G WW+ + + RP L+
Sbjct: 124 TFQTASLFWRFGGNNVN-IYGDG---------KGVIDGAGQYWWSAMAEDS-SVMRPCLL 172
Query: 179 EFMNSRSIIISNVIFQNSPFW-----NIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 233
IS + NSP W N + SN+ + + ++ A + NTDG D S
Sbjct: 173 GTDGLHHATISGLTMLNSPNWFNLIANSTDILISNMTMLVESEISDAPAKNTDGWDIYRS 232
Query: 234 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRV--TGSSPFSGIAVGSETS 291
SN+ I+DS I DD V+ K S+ I I+ + TGS GI+VGS
Sbjct: 233 SNIVIQDSRIVNTDDCVSFKPN-----------STQIVIQNLDCTGS---HGISVGSLGQ 278
Query: 292 GGVENVLAEHINLYNVGV 309
E + E + +YN+ +
Sbjct: 279 YQGETDIVEDLYIYNISM 296
>sp|P35337|PGLR_BRANA Polygalacturonase OS=Brassica napus PE=2 SV=1
Length = 397
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 123/280 (43%), Gaps = 33/280 (11%)
Query: 152 GTIDGQGAIWWNM------WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVY 205
GT DG+G W + + LP + + F + I +V ++ ++ + +
Sbjct: 113 GTFDGEGNAAWKANNCHKTFECKKLPIS----VRFDFVDNAEIKDVTSLDAKNFHFNVIS 168
Query: 206 CSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH 265
N+ + I+APA+SPNTDGI V I ++ I+TGDD ++V G
Sbjct: 169 GKNMTFDNIKIIAPAESPNTDGIHLGRCEGVKILNTKIATGDDCISVGDGM--------- 219
Query: 266 PSSGITIRRVTGSSPFSGIAVGSETSGG----VENVLAEHINLYNVGVGIHVKT--NIGR 319
+ I +V P GI+VGS G V ++ ++ L G+ +KT +
Sbjct: 220 --KNLLIEKVV-CGPGHGISVGSLGRYGWEQDVTDITVKNCTLEGTSNGLRIKTWPSAAC 276
Query: 320 GGFIRNITVSDVYMENARKGIKIAGDVGD-HPDDKFNPNALPVVNGITIKDVWGTKVQQS 378
I D+ + I I + + +K P+ + +V+ IT +++ GT +
Sbjct: 277 TTTAAGIHFEDIILNKVSNPILIDQEYCPWNQCNKNKPSTIKLVD-ITFRNIRGTSENKD 335
Query: 379 GL-IQGLKNSPFTGICLSNINLQGVAGPTSPP-LKCSDVS 416
+ + K P + + +IN++ GP PP +C++V+
Sbjct: 336 AVKLLCSKGHPCENVEIGDINIE-YTGPDGPPTFECTNVT 374
>sp|Q9UUZ2|XGHA_ASPTU Endo-xylogalacturonan hydrolase A OS=Aspergillus tubingensis
GN=xghA PE=2 SV=1
Length = 406
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 135/318 (42%), Gaps = 47/318 (14%)
Query: 48 GDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPG--VYLTGSFNLTSHMTLYLAKGAVIK 105
GD T + A EA+ + GGT+++ P G YL +L S + ++K
Sbjct: 43 GDSSTDDVPAITEALSSCGN----GGTIVF-PEGSTYYLNSVLDLGSCSDCDIQVEGLLK 97
Query: 106 ATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMW 165
DT W GR +S + DGL+ +TG +G IDG G W+++
Sbjct: 98 FASDTDYW----------SGRTA----MISVSNVDGLKLRSLTG-SGVIDGNGQDAWDLF 142
Query: 166 RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSP-FWNIHPVYCSNVVIRYVTILA--PADS 222
+ ++RP L+ ++ IS + +N P +N +NVV + + A +D+
Sbjct: 143 ASDS-SYSRPTLLYITGGSNLEISGLRQKNPPNVFNSVKGGATNVVFSNLKMDANSKSDN 201
Query: 223 P--NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSG-ITIRRV--TG 277
P NTDG D S+ V I + + DD VA K PSS +T+ + TG
Sbjct: 202 PPKNTDGFDIGESTYVTITEVTVVNDDDCVAFK------------PSSNYVTVDTISCTG 249
Query: 278 SSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGF----IRNITVSDVYM 333
S S ++G + V+N+ + N +KT G + N+T +D +
Sbjct: 250 SHGISVGSLGKSSDDSVKNIYVTGATMINSTKAAGIKTYPSGGDHGTSTVSNVTFNDFTV 309
Query: 334 ENARKGIKIAGDVGDHPD 351
+N+ +I G+ D
Sbjct: 310 DNSDYAFQIQSCYGEDDD 327
>sp|P26215|PGLR_COCCA Polygalacturonase OS=Cochliobolus carbonum GN=PGN1 PE=3 SV=1
Length = 364
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 107/237 (45%), Gaps = 20/237 (8%)
Query: 144 DVVITGENG-TIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIH 202
++ + G +G TID G WW+ + T+P + + IS + +N+P
Sbjct: 96 NIKVVGASGHTIDAAGQKWWD-GKGSNGGKTKPKFFYAHSLTTSSISGLNIKNTPVQAFS 154
Query: 203 PVYCSNVVIRYVTILAPA-DSP---NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDE 258
+ + + +TI A DS NTD D SSS + I ++ I DD VA+ SG D
Sbjct: 155 INGVTGLTLDRITIDNSAGDSAGAHNTDAFDIGSSSGITISNANIKNQDDCVAINSGSDI 214
Query: 259 YGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIG 318
+ +T + +G S +VG V+ V+ + N G+ +KT G
Sbjct: 215 H----------VTNCQCSGGHGVSIGSVGGRKDNTVKGVVVSGTTIANSDNGVRIKTISG 264
Query: 319 RGGFIRNITVSDVYMEN-ARKGIKIAGD-VGDHPDDKFNPNALPVVNGITIKDVWGT 373
G + +IT ++ ++N A+ GI I D + P K P + G+T+K+V G+
Sbjct: 265 ATGSVSDITYENITLKNIAKYGIVIEQDYLNGGPTGK--PTTGVPITGVTLKNVAGS 319
>sp|B8NPS8|XGHA_ASPFN Probable endo-xylogalacturonan hydrolase A OS=Aspergillus flavus
(strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722
/ SRRC 167) GN=xghA PE=3 SV=1
Length = 406
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 120/282 (42%), Gaps = 32/282 (11%)
Query: 140 DGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSP-- 197
DGL+ +TG +G IDG G W+ + + + + RP L+ +I +S + +N P
Sbjct: 118 DGLKLRSVTG-SGVIDGNGQESWDKFAEDS-SYKRPTLLYITGGSNIEVSGLRQKNPPNV 175
Query: 198 FWNIHPVYCSNVVIRYVTILAPADS----PNTDGIDPDSSSNVCIEDSYISTGDDLVAVK 253
F ++ SN +T+ A ++S NTD D +S+ V I I+ DD VA K
Sbjct: 176 FISVKGDT-SNAQFTSLTMDATSNSDNLPKNTDAFDIGASTYVTISSVAITNDDDCVAFK 234
Query: 254 SGWDEYGIAYGHPSSGITIRRV--TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGI 311
G + +T+ V TGS S ++G + V+NV A +I + N
Sbjct: 235 PGANY-----------VTVENVSCTGSHGISVGSLGKSSDDTVQNVYARNITMINSSKAA 283
Query: 312 HVKTNIGRGGF----IRNITVSDVYMENARKGIKIAGDVGDHPDDKF---NPNALPVVNG 364
+KT G ++N T D ++ +I G+ DD + NP V+ G
Sbjct: 284 GIKTYPSGGDHGLSTVKNATFEDFIVDGCDYAFQIQSCYGE--DDTYCEENPGD-AVLEG 340
Query: 365 ITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPT 406
I +K GT + + N G C I+ V P+
Sbjct: 341 IVVKGFTGTTSDKEDPVVANLNCGSKGTCDVTISGFEVKAPS 382
>sp|Q2UBD8|XGHA_ASPOR Probable endo-xylogalacturonan hydrolase A OS=Aspergillus oryzae
(strain ATCC 42149 / RIB 40) GN=xghA PE=3 SV=1
Length = 406
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 120/282 (42%), Gaps = 32/282 (11%)
Query: 140 DGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSP-- 197
DGL+ +TG +G IDG G W+ + + + + RP L+ +I +S + +N P
Sbjct: 118 DGLKLRSVTG-SGVIDGNGQESWDKFAEDS-SYKRPTLLYITGGSNIEVSGLRQKNPPNV 175
Query: 198 FWNIHPVYCSNVVIRYVTILAPADS----PNTDGIDPDSSSNVCIEDSYISTGDDLVAVK 253
F ++ SN +T+ A ++S NTD D +S+ V I I+ DD VA K
Sbjct: 176 FISVKGDT-SNAQFTSLTMDATSNSDNLPKNTDAFDIGASTYVTISSVAITNDDDCVAFK 234
Query: 254 SGWDEYGIAYGHPSSGITIRRV--TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGI 311
G + +T+ V TGS S ++G + V+NV A +I + N
Sbjct: 235 PGANY-----------VTVENVSCTGSHGISVGSLGKSSDDTVQNVYARNITMINSSKAA 283
Query: 312 HVKTNIGRGGF----IRNITVSDVYMENARKGIKIAGDVGDHPDDKF---NPNALPVVNG 364
+KT G ++N T D ++ +I G+ DD + NP V+ G
Sbjct: 284 GIKTYPSGGDHGLSTVKNATFEDFIVDGCDYAFQIQSCYGE--DDTYCEENPGD-AVLEG 340
Query: 365 ITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPT 406
I +K GT + + N G C I+ V P+
Sbjct: 341 IVVKGFTGTTSDKEDPVVANLNCGSKGTCDVTISGFEVKAPS 382
>sp|A2QK83|XGHA_ASPNC Probable endo-xylogalacturonan hydrolase A OS=Aspergillus niger
(strain CBS 513.88 / FGSC A1513) GN=xghA PE=3 SV=1
Length = 406
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 135/318 (42%), Gaps = 47/318 (14%)
Query: 48 GDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPG--VYLTGSFNLTSHMTLYLAKGAVIK 105
GD T + A EA+ + GGT+++ P G YL +L + + ++K
Sbjct: 43 GDSSTDDVPAITEALSSCGN----GGTIVF-PEGSTYYLNSVLDLGNCSNCDIQVEGLLK 97
Query: 106 ATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMW 165
DT W GR +S DGL+ +TG +G IDG G W+++
Sbjct: 98 FASDTDYW----------SGRTA----MISVSDVDGLKLRSLTG-SGVIDGNGQDAWDLF 142
Query: 166 RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSP-FWNIHPVYCSNVVIRYVTILA--PADS 222
+ ++RP L+ ++ IS + +N P +N +NVV + + A +D+
Sbjct: 143 ASDS-SYSRPTLLYITGGSNLEISGLRQKNPPNVFNSVKGGATNVVFSNLKMDANSKSDN 201
Query: 223 P--NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSG-ITIRRV--TG 277
P NTDG D S+ V I + + DD VA+K PSS +T+ + TG
Sbjct: 202 PPKNTDGFDIGESTYVTITEVTVVNDDDCVALK------------PSSNYVTVDTISCTG 249
Query: 278 SSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGF----IRNITVSDVYM 333
S S ++G + V+N+ + N +KT G + N+T +D +
Sbjct: 250 SHGISVGSLGKSSDDSVKNIYVTGATMINSTKAAGIKTYPSGGDHGTSTVSNVTFTDFTV 309
Query: 334 ENARKGIKIAGDVGDHPD 351
+N+ +I G+ D
Sbjct: 310 DNSDYAFQIQSCYGEDDD 327
>sp|A1DBR6|PGLRD_NEOFI Probable endopolygalacturonase D OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=pgaD
PE=3 SV=1
Length = 472
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 117/281 (41%), Gaps = 63/281 (22%)
Query: 144 DVVITGENG-TIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSII---ISNVIFQNSPFW 199
DV ITG +G IDG GA +W+ + ++P+ F+ ++ + I N+ QN P
Sbjct: 196 DVTITGADGHVIDGNGAAYWD-GKGSNGGSSKPD--HFIVAKHMYYSRIENLNIQNWPVH 252
Query: 200 NIHPVYCSNVVIRYVTILAPA-DSP-----------NTDGIDPDSSSNVCIEDSYISTGD 247
+ N++I +T+ A D+P N+DG D SS+N+ +++S++ D
Sbjct: 253 CFDIEHTENLIISGITLDNSAGDAPNSASGSKPAAHNSDGFDIKSSTNLTLQNSWVHNQD 312
Query: 248 DLVAVKSGWD-EYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYN 306
D VAV SG D Y + G++I ++G ++ V+ V + + N
Sbjct: 313 DCVAVSSGTDIVVDNMYCYGGHGLSIG-----------SIGGKSDNTVDGVTFSNSQVIN 361
Query: 307 VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGIT 366
G +K+N G G + NI ++ V+GIT
Sbjct: 362 SSNGCRIKSNSGTTGEVSNIRYENI-----------------------------TVSGIT 392
Query: 367 IKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTS 407
+G +QQ L G P G+ + NI V G S
Sbjct: 393 D---YGIDIQQDYLNGGPTGKPTNGVKIENITFVDVTGTMS 430
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.138 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 176,526,775
Number of Sequences: 539616
Number of extensions: 8183175
Number of successful extensions: 17391
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 104
Number of HSP's that attempted gapping in prelim test: 17074
Number of HSP's gapped (non-prelim): 226
length of query: 443
length of database: 191,569,459
effective HSP length: 121
effective length of query: 322
effective length of database: 126,275,923
effective search space: 40660847206
effective search space used: 40660847206
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)