Query 013402
Match_columns 443
No_of_seqs 257 out of 1733
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 09:55:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013402.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013402hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3jur_A EXO-poly-alpha-D-galact 100.0 6.4E-69 2.2E-73 542.6 32.2 362 31-414 20-421 (448)
2 1bhe_A PEHA, polygalacturonase 100.0 5.4E-62 1.8E-66 485.6 40.8 355 30-417 6-374 (376)
3 2uvf_A Exopolygalacturonase; G 100.0 1.7E-60 5.9E-65 500.0 41.9 359 32-403 150-565 (608)
4 1rmg_A Rgase A, rhamnogalactur 100.0 1.7E-59 5.8E-64 472.3 38.9 342 34-433 16-365 (422)
5 1czf_A Polygalacturonase II; b 100.0 1.1E-55 3.7E-60 435.7 32.4 320 35-416 26-357 (362)
6 2iq7_A Endopolygalacturonase; 100.0 1.1E-53 3.9E-58 419.0 33.7 315 53-416 6-332 (339)
7 1nhc_A Polygalacturonase I; be 100.0 2.4E-53 8.1E-58 416.3 33.6 315 53-417 6-332 (336)
8 1hg8_A Endopolygalacturonase; 100.0 4.7E-53 1.6E-57 415.6 35.7 317 54-417 7-345 (349)
9 1ia5_A Polygalacturonase; glyc 100.0 6.1E-53 2.1E-57 413.5 35.1 311 55-416 12-334 (339)
10 1k5c_A Endopolygalacturonase; 100.0 2.6E-53 8.9E-58 414.5 25.7 308 55-417 8-329 (335)
11 2x6w_A Tail spike protein; vir 100.0 1.2E-49 4.3E-54 403.7 21.4 302 34-402 47-384 (600)
12 1x0c_A Isopullulanase; glycosi 100.0 3.8E-43 1.3E-47 362.1 18.2 307 42-403 146-522 (549)
13 1ogo_X Dextranase; hydrolase, 100.0 1.1E-40 3.7E-45 343.4 27.6 270 71-403 229-547 (574)
14 1h80_A IOTA-carrageenase; hydr 100.0 1.1E-39 3.7E-44 328.9 28.6 300 33-401 16-360 (464)
15 3gq8_A Preneck appendage prote 100.0 2E-39 7E-44 330.7 30.2 304 35-405 19-374 (609)
16 3gqn_A Preneck appendage prote 100.0 5.1E-39 1.7E-43 332.3 27.7 304 35-405 19-374 (772)
17 2vbk_A Tailspike-protein; vira 100.0 4.4E-35 1.5E-39 282.1 12.6 228 36-308 49-286 (514)
18 2pyg_A Poly(beta-D-mannuronate 100.0 4.9E-31 1.7E-35 263.5 27.3 256 38-343 2-278 (377)
19 3jur_A EXO-poly-alpha-D-galact 99.9 1.5E-23 5.2E-28 211.5 23.8 227 134-402 190-444 (448)
20 3eqn_A Glucan 1,3-beta-glucosi 99.9 2.6E-23 8.9E-28 215.5 22.9 245 35-342 46-303 (758)
21 1czf_A Polygalacturonase II; b 99.9 2.9E-22 9.9E-27 197.3 25.4 194 176-403 88-320 (362)
22 1ia5_A Polygalacturonase; glyc 99.9 6.7E-22 2.3E-26 193.4 27.2 195 176-403 65-297 (339)
23 2iq7_A Endopolygalacturonase; 99.9 1.5E-21 5.3E-26 191.0 27.3 195 176-403 61-295 (339)
24 1nhc_A Polygalacturonase I; be 99.9 2.1E-21 7.3E-26 189.7 26.1 193 177-403 62-294 (336)
25 1rmg_A Rgase A, rhamnogalactur 99.9 5.3E-20 1.8E-24 184.9 33.8 170 200-403 129-311 (422)
26 2uvf_A Exopolygalacturonase; G 99.9 5.8E-21 2E-25 200.3 27.7 250 134-426 331-608 (608)
27 1bhe_A PEHA, polygalacturonase 99.9 2.3E-20 8E-25 185.4 28.3 198 175-402 100-338 (376)
28 1k5c_A Endopolygalacturonase; 99.9 2.5E-21 8.5E-26 188.7 20.4 198 177-401 60-287 (335)
29 1hg8_A Endopolygalacturonase; 99.9 1.7E-20 5.9E-25 184.0 26.2 195 176-403 62-307 (349)
30 1ogo_X Dextranase; hydrolase, 99.8 1E-16 3.5E-21 165.2 23.7 251 71-375 262-546 (574)
31 1x0c_A Isopullulanase; glycosi 99.7 1.2E-16 4E-21 164.8 23.4 276 71-393 220-546 (549)
32 2inu_A Insulin fructotransfera 99.6 7.3E-15 2.5E-19 142.7 18.2 242 34-315 10-283 (410)
33 1h80_A IOTA-carrageenase; hydr 99.6 1.2E-13 4.2E-18 139.2 22.4 159 181-382 106-278 (464)
34 3gq8_A Preneck appendage prote 99.4 2E-11 6.7E-16 125.1 25.2 157 134-336 134-309 (609)
35 3gqn_A Preneck appendage prote 99.4 3E-11 1E-15 125.7 25.4 157 134-336 134-309 (772)
36 2x6w_A Tail spike protein; vir 99.4 3.8E-13 1.3E-17 137.0 9.1 178 176-404 142-345 (600)
37 2pyg_A Poly(beta-D-mannuronate 99.3 8.7E-11 3E-15 116.7 20.9 219 140-403 131-361 (377)
38 1ru4_A Pectate lyase, PEL9A; p 99.3 5.1E-11 1.8E-15 118.4 18.6 249 33-343 11-299 (400)
39 1dbg_A Chondroitinase B; beta 99.2 2.4E-10 8.4E-15 116.2 18.9 207 55-314 31-271 (506)
40 3eqn_A Glucan 1,3-beta-glucosi 99.2 6.1E-11 2.1E-15 123.4 13.9 70 34-108 396-466 (758)
41 1pcl_A Pectate lyase E; lyase 98.7 5.3E-07 1.8E-11 87.7 18.1 84 224-307 132-227 (355)
42 3zsc_A Pectate trisaccharide-l 98.7 1E-06 3.6E-11 84.8 19.6 73 224-307 115-194 (340)
43 1pxz_A Major pollen allergen J 98.7 3E-07 1E-11 89.3 14.3 139 178-342 108-255 (346)
44 2qy1_A Pectate lyase II; GAG l 98.6 3.9E-07 1.3E-11 88.0 14.9 72 224-306 112-203 (330)
45 1idk_A Pectin lyase A; signal, 98.6 4.4E-07 1.5E-11 88.4 15.0 88 205-307 131-233 (359)
46 1qcx_A Pectin lyase B; beta-he 98.6 1.3E-06 4.5E-11 85.1 16.1 45 225-279 153-198 (359)
47 3uw0_A Pectinesterase; right-h 98.4 4.3E-06 1.5E-10 81.4 15.9 42 53-99 42-86 (364)
48 1gq8_A Pectinesterase; hydrola 98.4 1E-05 3.6E-10 77.5 18.3 62 182-250 92-159 (319)
49 1pxz_A Major pollen allergen J 98.4 1.8E-06 6.3E-11 83.7 12.3 132 183-336 87-226 (346)
50 2x3h_A K5 lyase, K5A lyase; ba 98.4 0.00013 4.3E-09 67.3 23.4 174 37-254 63-246 (542)
51 3zsc_A Pectate trisaccharide-l 98.4 9.3E-06 3.2E-10 78.2 16.8 166 144-338 63-251 (340)
52 1xg2_A Pectinesterase 1; prote 98.4 1.6E-05 5.4E-10 76.2 17.6 40 54-99 14-60 (317)
53 1air_A Pectate lyase C, PELC; 98.4 4.7E-06 1.6E-10 81.0 14.0 98 199-307 103-215 (353)
54 3vmv_A Pectate lyase; polysacc 98.3 8.6E-06 3E-10 78.1 15.2 134 205-370 101-249 (326)
55 1idk_A Pectin lyase A; signal, 98.1 7.4E-05 2.5E-09 72.7 15.6 169 144-341 103-284 (359)
56 1air_A Pectate lyase C, PELC; 98.1 1.9E-05 6.6E-10 76.7 11.2 145 177-341 104-265 (353)
57 1vbl_A Pectate lyase 47; PL 47 98.1 1.4E-05 4.7E-10 79.2 10.2 117 200-335 149-303 (416)
58 2nsp_A Pectinesterase A; micha 98.0 6.2E-05 2.1E-09 72.9 14.2 40 54-99 17-60 (342)
59 1pe9_A Pectate lyase A; parall 98.0 4.6E-05 1.6E-09 74.1 13.2 73 224-307 142-238 (361)
60 2o04_A Pectate lyase, PL; hexa 98.0 5.1E-05 1.7E-09 74.8 13.2 72 224-306 182-275 (399)
61 2o04_A Pectate lyase, PL; hexa 98.0 2.5E-05 8.4E-10 77.0 9.9 167 145-336 121-328 (399)
62 3vmv_A Pectate lyase; polysacc 97.9 0.0003 1E-08 67.3 16.3 159 141-336 77-249 (326)
63 1pe9_A Pectate lyase A; parall 97.9 5.1E-05 1.7E-09 73.8 11.0 144 144-306 82-259 (361)
64 1ru4_A Pectate lyase, PEL9A; p 97.9 7E-05 2.4E-09 74.2 12.0 142 177-342 109-275 (400)
65 2inu_A Insulin fructotransfera 97.9 0.0001 3.5E-09 71.8 12.0 131 184-340 136-279 (410)
66 1qcx_A Pectin lyase B; beta-he 97.8 0.00015 5E-09 70.7 12.8 168 144-340 103-283 (359)
67 1vbl_A Pectate lyase 47; PL 47 97.8 0.00016 5.5E-09 71.6 11.8 144 177-336 149-333 (416)
68 1pcl_A Pectate lyase E; lyase 97.7 0.00074 2.5E-08 65.5 15.2 146 178-336 98-279 (355)
69 2qy1_A Pectate lyase II; GAG l 97.6 0.00023 7.8E-09 68.6 10.3 148 177-341 87-254 (330)
70 3grh_A YBHC, acyl-COA thioeste 97.2 0.037 1.3E-06 54.3 20.2 45 54-99 88-135 (422)
71 2vbk_A Tailspike-protein; vira 96.3 0.015 5E-07 57.0 9.7 74 178-280 198-285 (514)
72 3t9g_A Pectate lyase; PL3, par 95.7 0.6 2.1E-05 40.2 15.5 129 208-372 53-183 (196)
73 1dbg_A Chondroitinase B; beta 95.6 0.077 2.6E-06 53.8 11.7 144 176-337 216-392 (506)
74 3t9g_A Pectate lyase; PL3, par 95.4 0.62 2.1E-05 40.2 14.6 132 183-338 51-183 (196)
75 1xg2_A Pectinesterase 1; prote 95.0 0.39 1.3E-05 45.6 13.9 110 205-336 88-205 (317)
76 1ee6_A Pectate lyase; parallel 94.8 0.47 1.6E-05 41.0 12.2 58 185-248 49-106 (197)
77 1gq8_A Pectinesterase; hydrola 94.4 0.26 9E-06 46.9 10.9 111 205-337 92-210 (319)
78 1ee6_A Pectate lyase; parallel 92.9 1.5 5.3E-05 37.9 11.9 110 207-342 48-159 (197)
79 3b4n_A Endo-pectate lyase; pec 92.5 4.6 0.00016 37.9 15.5 90 145-246 125-214 (344)
80 2nsp_A Pectinesterase A; micha 92.2 0.87 3E-05 43.7 10.8 54 233-306 139-192 (342)
81 3uw0_A Pectinesterase; right-h 91.6 1.5 5E-05 42.4 11.5 54 233-305 165-218 (364)
82 3b4n_A Endo-pectate lyase; pec 83.2 9.7 0.00033 35.8 10.9 43 207-254 158-201 (344)
83 3ju4_A Endo-N-acetylneuraminid 83.1 0.3 1E-05 47.3 0.7 22 44-65 4-25 (670)
84 3grh_A YBHC, acyl-COA thioeste 80.7 11 0.00037 37.0 10.7 20 233-252 232-251 (422)
85 3riq_A Tailspike protein; righ 69.6 83 0.0028 30.4 18.0 150 172-331 142-342 (543)
86 2vfm_A Bifunctional tail prote 55.6 22 0.00077 33.5 6.4 63 267-331 269-351 (559)
87 2vfm_A Bifunctional tail prote 54.0 78 0.0027 29.9 9.7 56 268-336 317-373 (559)
88 2v5i_A Salmonella typhimurium 53.9 77 0.0026 29.9 9.7 56 268-336 320-376 (559)
89 3riq_A Tailspike protein; righ 53.5 95 0.0033 30.0 10.4 15 205-219 261-275 (543)
90 2v5i_A Salmonella typhimurium 53.0 23 0.00078 33.5 6.0 64 267-332 272-355 (559)
91 2xc1_A Bifunctional tail prote 47.3 34 0.0012 33.7 6.4 63 267-331 376-458 (666)
92 2xc1_A Bifunctional tail prote 46.0 1.1E+02 0.0037 30.2 9.7 91 233-336 376-480 (666)
No 1
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=100.00 E-value=6.4e-69 Score=542.61 Aligned_cols=362 Identities=33% Similarity=0.543 Sum_probs=318.4
Q ss_pred cCCCCCceEEEeeccccCCCcchhHHHHHHHHHHhhhhccCCCeEEEECCCceEEEEeEeccccEEEEccCcEEEecCCC
Q 013402 31 PMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDT 110 (443)
Q Consensus 31 ~~~~~~~~~nV~dyGa~gDg~tddt~aiq~Ai~~~~~~~~~gg~~V~ip~G~Y~~~~l~l~s~~tl~~~~ga~l~~~~~~ 110 (443)
++..++++++|++|||+|||.+|||+|||+||++|+ +.+|++|+||+|+|++++|.|+|+++|+++ |+|+++.++
T Consensus 20 ~p~~~~~~~~v~~~GA~gdg~tddt~Aiq~Ai~~c~---~~ggg~v~vP~G~yl~~~l~l~s~v~l~l~--gtL~~s~d~ 94 (448)
T 3jur_A 20 EPQIPDREVNLLDFGARGDGRTDCSESFKRAIEELS---KQGGGRLIVPEGVFLTGPIHLKSNIELHVK--GTIKFIPDP 94 (448)
T ss_dssp CCCCCSCEEEGGGGTCCCEEEEECHHHHHHHHHHHH---HHTCEEEEECSSEEEESCEECCTTEEEEES--SEEEECCCG
T ss_pred CCCCCCcEEEEEecccCCCCCeecHHHHHHHHHhhh---hcCCeEEEECCCcEEEeeeEeCCCcEEEEE--EEEEecCCH
Confidence 334567799999999999999999999999999986 568999999999999999999999999998 999999999
Q ss_pred CCC-CCcCCCCCCCcccccCCCcceeeEEecCeeeeEEeccCcEEeCCC--chhhhhhccC-------------------
Q 013402 111 WNW-PLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG--AIWWNMWRQR------------------- 168 (443)
Q Consensus 111 ~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~G~~G~idG~G--~~~~~~~~~~------------------- 168 (443)
++| |.. ...++|.+. ..+.+||++.+++||+|+|. |+|||+| +.||+.....
T Consensus 95 ~~y~p~~---~~~~~G~~~--~~~~~lI~~~~~~ni~ItG~-GtIDG~G~~~~ww~~~~~~~~~~~~~~~~~~~~~~~l~ 168 (448)
T 3jur_A 95 ERYLPVV---LTRFEGIEL--YNYSPLVYALDCENVAITGS-GVLDGSADNEHWWPWKGKKDFGWKEGLPNQQEDVKKLK 168 (448)
T ss_dssp GGGCSCE---EEEETTEEE--EESCCSEEEESCEEEEEESS-CEEECCCBTTBBGGGGCCGGGTCCTTSCCSHHHHHHHH
T ss_pred HHhCccc---ccccccccc--cCccceEEEeCcEeeEEEEe-EEEECCCCchhhhhhcccccccccccccccccchhhhh
Confidence 998 432 123344332 24567899999999999998 9999999 8899753210
Q ss_pred ---------------CCCCCCCeeEEEEeecceEEEeEEEecCCCceEEeeeeeeEEEEeEEEECCCCCCCCCeecccCC
Q 013402 169 ---------------TLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 233 (443)
Q Consensus 169 ---------------~~~~~~~~~i~~~~~~nv~I~~v~i~n~~~~~i~~~~~~~v~i~~~~I~~~~~~~n~DGi~~~~s 233 (443)
.....||++|.|.+|+|++|+|++++|+++|++++..|++++|++++|.++ ++|+|||++.+|
T Consensus 169 ~~~~~~~p~~~~~~~~~~~~RP~~i~~~~~~nv~i~giti~nsp~~~i~~~~~~nv~i~~v~I~~~--~~NtDGidi~~s 246 (448)
T 3jur_A 169 EMAERGTPVEERVFGKGHYLRPSFVQFYRCRNVLVEGVKIINSPMWCIHPVLSENVIIRNIEISST--GPNNDGIDPESC 246 (448)
T ss_dssp HHHHHTCCGGGCBCSTTCCCCCCSEEEESCEEEEEESCEEESCSSCSEEEESCEEEEEESCEEEEC--STTCCSBCCBSC
T ss_pred hhhcccCcchhhhccccccCCceEEEEEcccceEEEeeEEEeCCCceEeeeccCCEEEEeEEEeec--cCCCccccccCC
Confidence 124579999999999999999999999999999999999999999999986 689999999999
Q ss_pred ccEEEEeeEEecCCceEEEccCccccccccCCCcccEEEEEEEEeC--CCceEEEccccCCcEEEEEEEeeEEeCCceeE
Q 013402 234 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS--PFSGIAVGSETSGGVENVLAEHINLYNVGVGI 311 (443)
Q Consensus 234 ~nv~I~n~~i~~gdD~i~i~sg~~~~g~~~~~~~~ni~i~n~~~~~--~~~gi~igs~~~~~v~nI~i~n~~~~~~~~gi 311 (443)
+||+|+||+|.++||||+++++++.+|...+.|++||+|+||+|++ +++||+|||+..++++||+|+||+|.++.+|+
T Consensus 247 ~nV~I~n~~i~~gDDcIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~~~~~v~nV~v~n~~~~~t~~Gi 326 (448)
T 3jur_A 247 KYMLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVVARNNVYMNVERAL 326 (448)
T ss_dssp EEEEEESCEEEESSEEEEEBCCCHHHHHHHCCCEEEEEEESCEEECSSCSEEEEECSSCTTCEEEEEEESCEEESCSEEE
T ss_pred cCEEEEeeEEEeCCCcEEeccCccccccccCCCceeEEEEEeEEecCCCcceEEECCcccCcEEEEEEEEEEEecccceE
Confidence 9999999999999999999999998888888999999999999944 35599999999999999999999999999999
Q ss_pred EEEeecCCCceEEEEEEEeEEEcccCeeE-EEEcccCCCCCCCCCCCCCCeEEeEEEEeEEEeccCeeEEEEecCCCCee
Q 013402 312 HVKTNIGRGGFIRNITVSDVYMENARKGI-KIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT 390 (443)
Q Consensus 312 ~i~s~~~~~g~v~nI~~~ni~~~~~~~~i-~i~~~~~~~~~~~~~~~~~~~i~nIt~~nI~~~~~~~~~~i~g~~~~~i~ 390 (443)
+||++.+++|.|+||+|+|++|+++.+++ .|++.|... .+...+.|+||+|+||+++....++.|.|+++.+|+
T Consensus 327 rIKt~~g~gG~v~nI~f~ni~m~~v~~~~i~I~~~Y~~~-----~~~~~~~i~nI~~~NI~~t~~~~~i~i~g~~~~p~~ 401 (448)
T 3jur_A 327 RLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRYDNE-----EGEYLPVVRSVFVKNLKATGGKYAVRIEGLENDYVK 401 (448)
T ss_dssp EEECCTTTCSEEEEEEEESCEEEEESSEEEEEESCGGGC-----CCSCCCEEEEEEEESCEEEECSEEEEEECBTTBCEE
T ss_pred EEEEEcCCCceEeeEEEEEEEEECCccccEEEEeeccCC-----CCCCCceEEEEEEEeEEEEecceEEEEEeCCCCCEe
Confidence 99999888899999999999999999988 999988653 122346899999999999987789999999999999
Q ss_pred eEEEEeEEEEeeCCCCCCCeeeee
Q 013402 391 GICLSNINLQGVAGPTSPPLKCSD 414 (443)
Q Consensus 391 ni~~~nv~~~~~~~~~~~~~~c~~ 414 (443)
||+|+||+++..+. ...|.+
T Consensus 402 ~I~~~nv~i~~~~~----~~~~~~ 421 (448)
T 3jur_A 402 DILISDTIIEGAKI----SVLLEF 421 (448)
T ss_dssp EEEEEEEEEESCSE----EEEEEE
T ss_pred eEEEEEEEEEcccc----ceeEec
Confidence 99999999997543 245555
No 2
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=100.00 E-value=5.4e-62 Score=485.63 Aligned_cols=355 Identities=26% Similarity=0.367 Sum_probs=305.3
Q ss_pred ccCCCCCceEEEeeccccCCCcchhHHHHHHHHHHhhhhccCCCeEEEECC---CceEEEEeEeccccEEEEccCcEEEe
Q 013402 30 VPMRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPP---GVYLTGSFNLTSHMTLYLAKGAVIKA 106 (443)
Q Consensus 30 ~~~~~~~~~~nV~dyGa~gDg~tddt~aiq~Ai~~~~~~~~~gg~~V~ip~---G~Y~~~~l~l~s~~tl~~~~ga~l~~ 106 (443)
+.+|..|.+|+|++|| .+|||+|||+||++|+ + |++|++|| |+|++++|.|+|+++|++++||+|++
T Consensus 6 ~~~p~~p~~~~v~~~G-----~~~dT~aiq~Ai~ac~----~-Gg~v~~~~~~~g~yl~g~i~l~s~vtL~l~~Ga~L~~ 75 (376)
T 1bhe_A 6 VSEPKTPSSCTTLKAD-----SSTATSTIQKALNNCD----Q-GKAVRLSAGSTSVFLSGPLSLPSGVSLLIDKGVTLRA 75 (376)
T ss_dssp CCCCCCCCEEEEEECC-----SSBCHHHHHHHHTTCC----T-TCEEEEECSSSSEEEESCEECCTTCEEEECTTCEEEE
T ss_pred cCCCCCCCeEEECCCC-----CCccHHHHHHHHHHhc----c-CCcEEEECCCCceEEEeEEEECCCCEEEECCCeEEEe
Confidence 3456677789999985 5799999999999884 4 55666664 79999999999999999999999999
Q ss_pred cCCCCCCCCcCCCCCCCcccccCCCcceeeEEecCeeeeEEeccCcEEeCCC--------chhhhhhcc---CCCCCCCC
Q 013402 107 TQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG--------AIWWNMWRQ---RTLPFTRP 175 (443)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~G~~G~idG~G--------~~~~~~~~~---~~~~~~~~ 175 (443)
+.++++|+.... .+.+.+..+....+||++.+++||+|+|. |+|||+| +.||+.... ......||
T Consensus 76 s~~~~~y~~~~~---~~g~~~~~g~~~~~~I~~~~~~ni~I~G~-G~IdG~G~~~~~~~~~~ww~~~~~~~~~~~~~~rp 151 (376)
T 1bhe_A 76 VNNAKSFENAPS---SCGVVDKNGKGCDAFITAVSTTNSGIYGP-GTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTP 151 (376)
T ss_dssp CSCSGGGBSSTT---CSSCEESCSCCBCCSEEEESCBSCEEECS-SEEECCTTSCCSSSSSCTTHHHHHHHHHTCEECCC
T ss_pred CCCHHHCcCCCc---cccccccCCCCcccEEEEECCEeEEEEeC-EEEECCCCcccCCCccccccccccccccCccCCCC
Confidence 999999976432 11222223334568899999999999998 9999998 579975321 12234689
Q ss_pred eeEEEEeecceEEEeEEEecCCCceEEeeeeeeEEEEeEEEECCCCCCCCCeecccCCccEEEEeeEEecCCceEEEccC
Q 013402 176 NLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSG 255 (443)
Q Consensus 176 ~~i~~~~~~nv~I~~v~i~n~~~~~i~~~~~~~v~i~~~~I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~sg 255 (443)
++|.|.+|+|++|++++++|++.|++++..|++++|++++|.++..++|+|||++.+|+||+|+||+|.++||||+++++
T Consensus 152 ~~i~~~~~~nv~I~~iti~nsp~~~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcIaiks~ 231 (376)
T 1bhe_A 152 RLIQINKSKNFTLYNVSLINSPNFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATGDDNVAIKAY 231 (376)
T ss_dssp CSEEEESCEEEEEEEEEEECCSSCSEEEESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEECSSCSEEEEEC
T ss_pred eEEEEEcceEEEEEeEEEECCCcEEEEEeCCCcEEEEeEEEECCCCCCCCceEeecCCceEEEEeCEEecCCCeEEEccc
Confidence 99999999999999999999999999999999999999999998888999999999999999999999999999999984
Q ss_pred ccccccccCCCcccEEEEEEEEeCCCceEEEccccCCcEEEEEEEeeEEeCCceeEEEEeecCCCceEEEEEEEeEEEcc
Q 013402 256 WDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 335 (443)
Q Consensus 256 ~~~~g~~~~~~~~ni~i~n~~~~~~~~gi~igs~~~~~v~nI~i~n~~~~~~~~gi~i~s~~~~~g~v~nI~~~ni~~~~ 335 (443)
.+ ..|++||+|+||+|.. ++||+||||.. +++||+|+||+|.++.+|++||++.+++|.|+||+|+|++|++
T Consensus 232 ~~------~~~s~nI~I~n~~~~~-ghGisiGSe~~-~v~nV~v~n~~~~~t~~GirIKt~~g~~G~v~ni~f~ni~~~~ 303 (376)
T 1bhe_A 232 KG------RAETRNISILHNDFGT-GHGMSIGSETM-GVYNVTVDDLKMNGTTNGLRIKSDKSAAGVVNGVRYSNVVMKN 303 (376)
T ss_dssp TT------SCCEEEEEEEEEEECS-SSCEEEEEEES-SEEEEEEEEEEEESCSEEEEEECCTTTCCEEEEEEEEEEEEES
T ss_pred CC------CCCceEEEEEeeEEEc-cccEEeccCCc-cEeeEEEEeeEEeCCCcEEEEEEecCCCceEeeEEEEeEEEeC
Confidence 21 2469999999999987 78999999987 8999999999999999999999999889999999999999999
Q ss_pred cCeeEEEEcccCCCCCCCCCCCCCCeEEeEEEEeEEEeccCeeEEEEecCCCCeeeEEEEeEEEEeeCCCCCCCeeeeec
Q 013402 336 ARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDV 415 (443)
Q Consensus 336 ~~~~i~i~~~~~~~~~~~~~~~~~~~i~nIt~~nI~~~~~~~~~~i~g~~~~~i~ni~~~nv~~~~~~~~~~~~~~c~~v 415 (443)
+.+||.|++.|... .+...+.|+||+|+||+++... ++.|.|+++.||++|+|+||+++.+ ..|.|.||
T Consensus 304 v~~~i~i~~~y~~~-----~~~~~~~i~ni~~~ni~gt~~~-~~~l~g~~~~~~~~I~l~nv~l~~~-----~~~~~~~~ 372 (376)
T 1bhe_A 304 VAKPIVIDTVYEKK-----EGSNVPDWSDITFKDVTSETKG-VVVLNGENAKKPIEVTMKNVKLTSD-----STWQIKNV 372 (376)
T ss_dssp CSEEEEEETTSSCC-----CCCCCCEEEEEEEEEEEECSCC-EEEEECTTCSSCEEEEEEEEECCTT-----CEEEEESE
T ss_pred CCceEEEEeeccCC-----CCCcCcEEEEEEEEEEEEEecc-eEEEEeCCCCCeeeEEEEeEEEecC-----CCceEEEE
Confidence 99999999988652 1233468999999999999765 6889999999999999999999874 34999998
Q ss_pred cc
Q 013402 416 SG 417 (443)
Q Consensus 416 ~~ 417 (443)
..
T Consensus 373 ~~ 374 (376)
T 1bhe_A 373 NV 374 (376)
T ss_dssp EE
T ss_pred Ee
Confidence 64
No 3
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=100.00 E-value=1.7e-60 Score=500.04 Aligned_cols=359 Identities=26% Similarity=0.367 Sum_probs=301.9
Q ss_pred CCCCCceEEEeeccccCCCcchhHHHHHHHHHHhhhhccCCCeEEEECCCceEEEEeEeccccEEEEccCcEEEecCCCC
Q 013402 32 MRYRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTW 111 (443)
Q Consensus 32 ~~~~~~~~nV~dyGa~gDg~tddt~aiq~Ai~~~~~~~~~gg~~V~ip~G~Y~~~~l~l~s~~tl~~~~ga~l~~~~~~~ 111 (443)
.++.++.++|++|||+|||.+|||+|||+||++|+ . |++|+||+|+|++++|.|+|+++|++++||+|+++.+.+
T Consensus 150 T~~~~~~~~v~~~Ga~~dg~~ddt~aiq~Ai~~c~----~-g~~v~vP~G~y~~g~i~lks~v~L~l~~gatL~~s~d~~ 224 (608)
T 2uvf_A 150 TSAKPQIVNVRDFGAIDDGKTLNTKAIQQAIDSCK----P-GCRVEIPAGTYKSGALWLKSDMTLNLQAGAILLGSENPD 224 (608)
T ss_dssp CCCCCCEEEGGGGTCCSSSSCCCHHHHHHHHHTCC----T-TEEEEECSEEEEECCEECCSSEEEEECTTEEEEECSCGG
T ss_pred cccCCCEEecccccccCCCCccCHHHHHHHHHhcC----C-CCEEEECCCceEecceeccCceEEEecCCcEEEecCCHH
Confidence 34567799999999999999999999999999884 3 899999999999999999999999999999999999998
Q ss_pred CCCCcCCCCCCCcccccCCCcceeeEEecC--------eeeeEEeccCcEEeCCCchhhhhhcc-CC-------------
Q 013402 112 NWPLIAPLPSYGRGRERPGGRYMSFIHGDG--------LQDVVITGENGTIDGQGAIWWNMWRQ-RT------------- 169 (443)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--------~~nv~I~G~~G~idG~G~~~~~~~~~-~~------------- 169 (443)
+|+.......|. +..++.++|++.+ ++||+|+|. |+|||+|..||+.... ..
T Consensus 225 ~y~~~~~~~~~~-----~~~~~~~lI~~~~~~~~~~g~~~ni~I~G~-GtIDG~G~~~~~~~~~~~~~g~~~p~~~~~~~ 298 (608)
T 2uvf_A 225 DYPAGYRLYPYS-----TIERPASLINAIDPNNSKPGTFRNIRITGS-GVIDGNGWLRAKTAEITDELGRSLPQYVASKN 298 (608)
T ss_dssp GSCEEECSSTTC-----CSCEECCSEEECCSSCCCTTSEEEEEEESS-CEEECCCBCEEEEEEEECTTSCEEEEECCCCT
T ss_pred HCcCcceeeecc-----ccccccceEEeeccccccccceeeEEEEee-EEEcCccccccccccccccccccccccccccc
Confidence 887321111111 1123457888887 799999998 9999999888742100 00
Q ss_pred ---------------------C------CCCCCeeEEEEeecceEEEeEEEecCCCceEEeeeeeeEEEEeEEEECCCCC
Q 013402 170 ---------------------L------PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS 222 (443)
Q Consensus 170 ---------------------~------~~~~~~~i~~~~~~nv~I~~v~i~n~~~~~i~~~~~~~v~i~~~~I~~~~~~ 222 (443)
. ...||++|.|.+|+|++|+|++++|++.|++++..|++++|++++|.. ..+
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~rP~~i~~~~~~nv~I~giti~ns~~~~i~~~~~~nv~i~~v~i~~-~~~ 377 (608)
T 2uvf_A 299 SKVHEDGILAKNQVEKAVSDGMDLKNAYGQRRSSLMTLRGVENVYLAGFTVRNPAFHGIMNLENHNVVANGLIHQT-YDA 377 (608)
T ss_dssp TTHHHHBSHHHHHHHHHHHTTCCHHHHHHHSSCCSEEEESEEEEEEESCEEECCSSCSEEEESCEEEEEESCEEEC-TTC
T ss_pred ccccccccccccccccccccccccccccccCCCeEEEEEeeeeEEEeCcEEecCCCCEEEEecCCCEEEeeEEEcC-CCC
Confidence 0 114899999999999999999999999999999999999999999865 557
Q ss_pred CCCCeecccCCccEEEEeeEEecCCceEEEccCccccccccCCCcccEEEEEEEEeCCCceEEEccccCCcEEEEEEEee
Q 013402 223 PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHI 302 (443)
Q Consensus 223 ~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~sg~~~~g~~~~~~~~ni~i~n~~~~~~~~gi~igs~~~~~v~nI~i~n~ 302 (443)
+|+|||++.+|+||+|+||+|.++||||+++++++.+|.. .+|++||+|+||+|.+++.++.|||++.++++||+|+||
T Consensus 378 ~NtDGidi~~s~nV~I~n~~i~~gDD~Iaiksg~~~~g~~-~~~s~nI~I~n~~~~~ghg~~~iGS~~~~~v~nI~v~n~ 456 (608)
T 2uvf_A 378 NNGDGIEFGNSQNVMVFNNFFDTGDDCINFAAGTGEKAQE-QEPMKGAWLFNNYFRMGHGAIVTGSHTGAWIEDILAENN 456 (608)
T ss_dssp TTCCSEEEESCEEEEEESCEEECSSCSEEEECCCSGGGGG-SCCEEEEEEESCEECSSSCSEEEESCCTTCEEEEEEESC
T ss_pred CCCCeEEecCCceEEEEeeEEecCCceEEecCCcCccccc-cccccCEEEEeEEEeCCCCeEEEcccCCCCEEEEEEEeE
Confidence 8999999999999999999999999999999999988887 789999999999998866666799999999999999999
Q ss_pred EEeCCceeEEEEeecCCCceEEEEEEEeEEEccc-CeeEEEEcccCCCCC-CCCCCC-CCCeEEeEEEEeEEEeccC---
Q 013402 303 NLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENA-RKGIKIAGDVGDHPD-DKFNPN-ALPVVNGITIKDVWGTKVQ--- 376 (443)
Q Consensus 303 ~~~~~~~gi~i~s~~~~~g~v~nI~~~ni~~~~~-~~~i~i~~~~~~~~~-~~~~~~-~~~~i~nIt~~nI~~~~~~--- 376 (443)
+|.++.+|++||++.+++|.|+||+|+|++|+++ .+||.|++.|..... ..+.+. ..+.+++|+|+||++.+..
T Consensus 457 ~~~~t~~GirIKt~~g~gG~v~nI~~~ni~m~~v~~~~i~I~~~y~~~~~~~~~~~~~~~~~~~~V~i~nI~~~n~~gt~ 536 (608)
T 2uvf_A 457 VMYLTDIGLRAKSTSTIGGGARNVTFRNNAMRDLAKQVMVMTLDYADSNANIDYPPAKIPAQFYDFTLKNVTVDNSTGKN 536 (608)
T ss_dssp EEESCSEEEEEEEETTTCCEEEEEEEEEEEEEEESSEEEEEEEECCCCSCCCSSCCCSSCCEEEEEEEEEEEEEEECSSS
T ss_pred EEECCCceEEEeeecCCCceEECcEEEeeEEEccccccEEEEeccCCCCcccccCCcCCCCccccEEEEeEEEEeeeceE
Confidence 9999999999999998889999999999999999 599999999875322 122222 2346889999998887654
Q ss_pred eeEEEEec--CCCCeeeEEEEeEEEEeeC
Q 013402 377 QSGLIQGL--KNSPFTGICLSNINLQGVA 403 (443)
Q Consensus 377 ~~~~i~g~--~~~~i~ni~~~nv~~~~~~ 403 (443)
.++.|.|. +..+|+||+|+||+++...
T Consensus 537 ~~i~i~g~~~~~~p~~ni~~~nv~i~~~~ 565 (608)
T 2uvf_A 537 PSIEIKGDTANKAWHRLVHVNNVQLNNVT 565 (608)
T ss_dssp CSEEEECBGGGTBCEEEEEEEEEEEESCC
T ss_pred EeEEEEEEcCCCCccccEEEEeEEEEccC
Confidence 35666665 4568999999999998754
No 4
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=100.00 E-value=1.7e-59 Score=472.29 Aligned_cols=342 Identities=21% Similarity=0.316 Sum_probs=292.7
Q ss_pred CCCceEEEeeccccCCCcchhHHHHHHHHHHhhhhccCCCeEEEECCCceEEEE-eEec--cccEEEEccCcEEEecCCC
Q 013402 34 YRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGS-FNLT--SHMTLYLAKGAVIKATQDT 110 (443)
Q Consensus 34 ~~~~~~nV~dyGa~gDg~tddt~aiq~Ai~~~~~~~~~gg~~V~ip~G~Y~~~~-l~l~--s~~tl~~~~ga~l~~~~~~ 110 (443)
+..++++|++|||+|||.+|||+|||+||++|+ +|++|+||+|+|++++ |.|+ ++++|+++ |+.+..+++.
T Consensus 16 ~~~~~~~V~~~GA~~dg~tddT~Aiq~Ai~ac~-----~g~~V~vP~G~Yli~~~l~l~g~s~v~l~l~-G~~l~~~~~~ 89 (422)
T 1rmg_A 16 GATKTCNILSYGAVADNSTDVGPAITSAWAACK-----SGGLVYIPSGNYALNTWVTLTGGSATAIQLD-GIIYRTGTAS 89 (422)
T ss_dssp HHHCEEEGGGGTCCCSSSSBCHHHHHHHHHHHT-----BTCEEEECSSEEEECSCEEEESCEEEEEEEC-SEEEECCCCS
T ss_pred cCCcEEEeeeccccCCCCcccHHHHHHHHHHCC-----CCCEEEECCCeEEeCCceeecCCCeEEEEEc-CcEEcccCCC
Confidence 346789999999999999999999999999883 5889999999999994 9999 68888886 5444432211
Q ss_pred CCCCCcCCCCCCCcccccCCCcceeeEEecCeeeeEEeccCcEEeCCCchhhhhhccCCCCCCCCeeEEEEeecceEEEe
Q 013402 111 WNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISN 190 (443)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~G~~G~idG~G~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~~ 190 (443)
..|..++.+.+++++.|+|. |+|||+|+.||.. ...||++|++.+|+|++|++
T Consensus 90 --------------------~~~~~~~~~~~~~~i~i~G~-G~IdG~G~~~w~~------~~~rp~~i~~~~~~nv~I~~ 142 (422)
T 1rmg_A 90 --------------------GNMIAVTDTTDFELFSSTSK-GAVQGFGYVYHAE------GTYGARILRLTDVTHFSVHD 142 (422)
T ss_dssp --------------------SEEEEEEEEEEEEEECSSSC-CEEECCTHHHHTT------TCCCCEEEEEEEEEEEEEEE
T ss_pred --------------------CceEEEEecCceeEEeeccC-EEEECCcchhhcC------CCCCceEEEEcccceEEEEC
Confidence 23445667788888888998 9999999999963 12389999999999999999
Q ss_pred EEEecCCCceEEeeeeeeEEEEeEEEECCCCCCCCCeecccCCccEEEEeeEEecCCceEEEccCccccccccCCCcccE
Q 013402 191 VIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGI 270 (443)
Q Consensus 191 v~i~n~~~~~i~~~~~~~v~i~~~~I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~sg~~~~g~~~~~~~~ni 270 (443)
++++|++.|++++..|+|++|+|++|.+ .+.+++|||++.+ +||+|+||+|.++||||+++++ ++||
T Consensus 143 iti~nsp~~~i~i~~~~nv~I~n~~I~~-~d~~ntDGidi~~-~nV~I~n~~i~~gDD~Iai~s~-----------~~nI 209 (422)
T 1rmg_A 143 IILVDAPAFHFTMDTCSDGEVYNMAIRG-GNEGGLDGIDVWG-SNIWVHDVEVTNKDECVTVKSP-----------ANNI 209 (422)
T ss_dssp EEEECCSSCSEEEEEEEEEEEEEEEEEC-CSSTTCCSEEEEE-EEEEEEEEEEESSSEEEEEEEE-----------EEEE
T ss_pred eEEECCCceEEEEeCcCCEEEEeEEEEC-CCCCCCccEeecC-CeEEEEeeEEeCCCCeEEeCCC-----------CcCE
Confidence 9999999999999999999999999998 4567899999998 9999999999999999999984 8999
Q ss_pred EEEEEEEeCCCceEEEcccc-CCcEEEEEEEeeEEeCCceeEEEEeecCCCceEEEEEEEeEEEcccCeeEEEEcccCCC
Q 013402 271 TIRRVTGSSPFSGIAVGSET-SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDH 349 (443)
Q Consensus 271 ~i~n~~~~~~~~gi~igs~~-~~~v~nI~i~n~~~~~~~~gi~i~s~~~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~ 349 (443)
+|+||+|.. ++||+|||+. .+.++||+|+||+|.++.+|++||++.+ .|.++||+|+|++|++++++|.|++.|...
T Consensus 210 ~I~n~~~~~-~~GisIGS~g~~~~v~nV~v~n~~~~~~~~Gi~Ikt~~g-~G~v~nI~~~NI~~~~v~~~i~i~~~y~~~ 287 (422)
T 1rmg_A 210 LVESIYCNW-SGGCAMGSLGADTDVTDIVYRNVYTWSSNQMYMIKSNGG-SGTVSNVLLENFIGHGNAYSLDIDGYWSSM 287 (422)
T ss_dssp EEEEEEEES-SSEEEEEEECTTEEEEEEEEEEEEEESSSCSEEEEEBBC-CEEEEEEEEEEEEEEEESCSEEEETBCTTS
T ss_pred EEEeEEEcC-CcceeecccCCCCcEEEEEEEeEEEeccceEEEEEecCC-CcEEEEEEEEeEEEECccccEEEEeeccCC
Confidence 999999977 5799999986 4579999999999999999999999754 589999999999999999999999988652
Q ss_pred CCCCCCCCCCCeEEeEEEEeEEEecc----CeeEEEEecCCCCeeeEEEEeEEEEeeCCCCCCCeeeeecccCcCcccCC
Q 013402 350 PDDKFNPNALPVVNGITIKDVWGTKV----QQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPW 425 (443)
Q Consensus 350 ~~~~~~~~~~~~i~nIt~~nI~~~~~----~~~~~i~g~~~~~i~ni~~~nv~~~~~~~~~~~~~~c~~v~~~~~~~~p~ 425 (443)
.. .+...+.|+||+|+||+++.. ..++.|.|.++.+|+||+|+||+++..++.. ..+.|.|+.+..
T Consensus 288 ~~---~~~~~~~i~nI~~~nI~gt~~~g~~~~~i~i~~~~~~~~~ni~l~nv~i~~~~g~~-~~~~C~n~~g~g------ 357 (422)
T 1rmg_A 288 TA---VAGDGVQLNNITVKNWKGTEANGATRPPIRVVCSDTAPCTDLTLEDIAIWTESGSS-ELYLCRSAYGSG------ 357 (422)
T ss_dssp CC---BSSSCCEEEEEEEEEEEEEESCTTTSCSEEEECBTTBCEEEEEEEEEEEEESSSSC-EEEEEESEEEES------
T ss_pred Cc---ccCCCceEEEEEEEeEEEEecccccceeEEEEeCCCCcEeeEEEEeEEEEcCCCCc-cceEEECCCccc------
Confidence 21 122335899999999999874 2478999999999999999999999876643 469999998753
Q ss_pred CCCCCcCC
Q 013402 426 PCSELSSS 433 (443)
Q Consensus 426 ~~~~~~~~ 433 (443)
+|++..+.
T Consensus 358 ~C~~~~~~ 365 (422)
T 1rmg_A 358 YCLKDSSS 365 (422)
T ss_dssp TTCBCCSS
T ss_pred cccCCCCC
Confidence 78775433
No 5
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=100.00 E-value=1.1e-55 Score=435.73 Aligned_cols=320 Identities=21% Similarity=0.287 Sum_probs=268.8
Q ss_pred CCceEEEeeccccCCCcchhHHHHHHHHHHhhhhccCCCeEEEECCCceEEEEe-EeccccEEEEccCcEEEecCCCCCC
Q 013402 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSF-NLTSHMTLYLAKGAVIKATQDTWNW 113 (443)
Q Consensus 35 ~~~~~nV~dyGa~gDg~tddt~aiq~Ai~~~~~~~~~gg~~V~ip~G~Y~~~~l-~l~s~~tl~~~~ga~l~~~~~~~~~ 113 (443)
..++++|++ ++|||+||++|+ +.++++|+||+|+|+ .| .|+++++|.++ +++.+. ...|
T Consensus 26 ~~~~Ctv~~-----------~~aiq~ai~~c~---~~~g~~v~vP~G~~l--~l~~l~~~~~l~~~--g~~~~~--~~~w 85 (362)
T 1czf_A 26 ARDSCTFTT-----------AAAAKAGKAKCS---TITLNNIEVPAGTTL--DLTGLTSGTKVIFE--GTTTFQ--YEEW 85 (362)
T ss_dssp --CEEEESS-----------HHHHHHHGGGCS---EEEEESCEECTTCCE--EECSCCTTCEEEEE--SEEEEC--CCCS
T ss_pred CCCEEEECC-----------HHHHHHHHHHhh---ccCCCEEEECCCEEE--EeeccCCCeEEEEe--CcEEec--cccC
Confidence 336799976 689999999996 557899999999998 35 67889999887 344442 1222
Q ss_pred CCcCCCCCCCcccccCCCcceeeEEecCeeeeEEecc-CcEEeCCCchhhhhhccCCCCCCCCeeEEEEeecceEEEeEE
Q 013402 114 PLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGE-NGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVI 192 (443)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~G~-~G~idG~G~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~ 192 (443)
. + .|+.+ +.+||+|+|. .|+|||+|+.||+.... ....||++|+|.+|+|++|++++
T Consensus 86 ~----------g---------~~i~~-~~~nv~I~G~~~g~IdG~G~~~w~~~~~--~~~~rP~~i~~~~~~nv~i~~it 143 (362)
T 1czf_A 86 A----------G---------PLISM-SGEHITVTGASGHLINCDGARWWDGKGT--SGKKKPKFFYAHGLDSSSITGLN 143 (362)
T ss_dssp C----------C---------CSEEE-EEESCEEEECTTCEEECCGGGTCCSCTT--SSSCCCCCEEEEEEETEEEESCE
T ss_pred C----------C---------cEEEE-eCccEEEEcCCCcEEECCCchhhcccCC--CCCCCCeEEEEeecccEEEEEEE
Confidence 1 1 35665 4499999993 29999999999985432 25679999999999999999999
Q ss_pred EecCCCceEEeeeeeeEEEEeEEEECCCC----CCCCCeecccCCccEEEEeeEEecCCceEEEccCccccccccCCCcc
Q 013402 193 FQNSPFWNIHPVYCSNVVIRYVTILAPAD----SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 268 (443)
Q Consensus 193 i~n~~~~~i~~~~~~~v~i~~~~I~~~~~----~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~sg~~~~g~~~~~~~~ 268 (443)
++|+|.|++++. |+||+|++++|.++.+ ++|+||||+.+|+||+|+||+|.++||||++++ .+
T Consensus 144 i~nsp~~~i~i~-~~nv~i~~~~I~~~~~d~~~~~NtDGidi~~s~nV~I~n~~i~~gDDcIaiks------------g~ 210 (362)
T 1czf_A 144 IKNTPLMAFSVQ-ANDITFTDVTINNADGDTQGGHNTDAFDVGNSVGVNIIKPWVHNQDDCLAVNS------------GE 210 (362)
T ss_dssp EECCSSCCEEEE-CSSEEEESCEEECGGGGTTTCCSCCSEEECSCEEEEEESCEEECSSCSEEESS------------EE
T ss_pred EecCCccEEEEe-eCCEEEEEEEEECCccccccCCCCCceeecCcceEEEEeeEEecCCCEEEEeC------------Ce
Confidence 999999999999 9999999999999643 789999999999999999999999999999998 48
Q ss_pred cEEEEEEEEeCCCceEEEccc---cCCcEEEEEEEeeEEeCCceeEEEEeecCCCceEEEEEEEeEEEcccC-eeEEEEc
Q 013402 269 GITIRRVTGSSPFSGIAVGSE---TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR-KGIKIAG 344 (443)
Q Consensus 269 ni~i~n~~~~~~~~gi~igs~---~~~~v~nI~i~n~~~~~~~~gi~i~s~~~~~g~v~nI~~~ni~~~~~~-~~i~i~~ 344 (443)
||+|+||+|.. ++||+|||+ ..+.++||+|+||+|.++.+|++||++++++|.|+||+|+|++|+++. +||.|++
T Consensus 211 nI~i~n~~~~~-ghGisiGS~G~~~~~~v~nV~v~n~~~~~t~~GirIKt~~g~~G~v~nI~~~ni~~~~v~~~~i~I~~ 289 (362)
T 1czf_A 211 NIWFTGGTCIG-GHGLSIGSVGDRSNNVVKNVTIEHSTVSNSENAVRIKTISGATGSVSEITYSNIVMSGISDYGVVIQQ 289 (362)
T ss_dssp EEEEESCEEES-SCCEEEEEECSSSCCEEEEEEEEEEEEEEEEEEEEEEEETTCCEEEEEEEEEEEEEEEEEEEEEEEEE
T ss_pred EEEEEEEEEeC-CceeEEeeccccCCCCEEEEEEEeeEEECCceEEEEEEeCCCCceEeeEEEEeEEEECcccccEEEEE
Confidence 99999999988 579999997 457899999999999999999999999988899999999999999986 7999999
Q ss_pred ccCCCCCCCCCCCCCCeEEeEEEEeEEEeccC--eeEEEEecCCCCeeeEEEEeEEEEeeCCCCCCCeeeeecc
Q 013402 345 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQ--QSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVS 416 (443)
Q Consensus 345 ~~~~~~~~~~~~~~~~~i~nIt~~nI~~~~~~--~~~~i~g~~~~~i~ni~~~nv~~~~~~~~~~~~~~c~~v~ 416 (443)
.|... .....|...+.|+||+|+||+++... .++.|.|. +.+|+||+|+||+++..+ ....|.|+.
T Consensus 290 ~Y~~~-~~~~~p~~~~~i~nI~~~ni~gt~~~~~~~i~i~c~-~~~c~ni~~~nv~i~~~~----~~~~C~n~~ 357 (362)
T 1czf_A 290 DYEDG-KPTGKPTNGVTIQDVKLESVTGSVDSGATEIYLLCG-SGSCSDWTWDDVKVTGGK----KSTACKNFP 357 (362)
T ss_dssp EEETT-EECSCCCSSEEEEEEEEEEEEEEECTTSEEEEEECC-TTTEEEEEEEEEEEESSB----CCSCCBSCC
T ss_pred ecCCC-CCCCCCCCCceEEEEEEEEEEEEecCCceEEEEEeC-CCcCcCEEEEeEEEEcCC----CcccCcCCC
Confidence 88642 11122333458999999999999875 68899997 789999999999998632 235688875
No 6
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=100.00 E-value=1.1e-53 Score=419.03 Aligned_cols=315 Identities=23% Similarity=0.293 Sum_probs=265.0
Q ss_pred hhHHHHHHHHHHhhhhccCCCeEEEECCCceEEEEe-EeccccEEEEccCcEEEecCCCCCCCCcCCCCCCCcccccCCC
Q 013402 53 LNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSF-NLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGG 131 (443)
Q Consensus 53 ddt~aiq~Ai~~~~~~~~~gg~~V~ip~G~Y~~~~l-~l~s~~tl~~~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (443)
.||+|||+||++|+ +.++++|+||+|+|+. | .|+++++|.++ +++.+. ...|.
T Consensus 6 ~dt~aiq~ai~~c~---~~~g~~v~vP~G~~~~--l~~l~~~~~l~~~--g~~~~~--~~~w~----------------- 59 (339)
T 2iq7_A 6 TDAAAAIKGKASCT---SIILNGIVVPAGTTLD--MTGLKSGTTVTFQ--GKTTFG--YKEWE----------------- 59 (339)
T ss_dssp SCHHHHHHHGGGCS---EEEEESCEECTTCCEE--ECSCCTTCEEEEE--SEEEEC--CCCSC-----------------
T ss_pred CCHHHHHHHHHHhh---ccCCCeEEECCCEEEE--eeccCCCeEEEEe--CcEEcc--ccccc-----------------
Confidence 46899999999996 5568899999999984 5 67888888887 344432 22221
Q ss_pred cceeeEEecCeeeeEEecc-CcEEeCCCchhhhhhccCCCCCCCCeeEEEEeecceEEEeEEEecCCCceEEeeeeeeEE
Q 013402 132 RYMSFIHGDGLQDVVITGE-NGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVV 210 (443)
Q Consensus 132 ~~~~~i~~~~~~nv~I~G~-~G~idG~G~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i~n~~~~~i~~~~~~~v~ 210 (443)
..++.+.+ +||+|+|. .|+|||+|+.||+..... ....||++|+|.+|+|++|++++++|+|.|++++..|++++
T Consensus 60 --g~~i~~~~-~nv~I~G~~gG~IdG~G~~~w~~~~~~-~~~~rp~~i~~~~~~nv~i~giti~nsp~~~i~i~~~~nv~ 135 (339)
T 2iq7_A 60 --GPLISFSG-TNININGASGHSIDCQGSRWWDSKGSN-GGKTKPKFFYAHSLKSSNIKGLNVLNTPVQAFSINSATTLG 135 (339)
T ss_dssp --CCSEEEEE-ESCEEEECTTCEEECCGGGTCCSCGGG-SSSCCCCCEEEEEEEEEEEECCEEECCSSCCEEEESCEEEE
T ss_pred --CcEEEEEc-ccEEEEcCCCCEEECCccccccccccc-CCCCCCeEEEEeeeCcEEEEEEEEEeCCcceEEEeccCCEE
Confidence 13566654 99999996 379999999999754322 25678999999999999999999999999999999999999
Q ss_pred EEeEEEECCCC----CCCCCeecccCCccEEEEeeEEecCCceEEEccCccccccccCCCcccEEEEEEEEeCCCceEEE
Q 013402 211 IRYVTILAPAD----SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 286 (443)
Q Consensus 211 i~~~~I~~~~~----~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~sg~~~~g~~~~~~~~ni~i~n~~~~~~~~gi~i 286 (443)
|++++|.++.. ++|+|||++.+|+||+|+||+|.++||||++++ .+||+|+||+|.. ++||+|
T Consensus 136 i~~~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~gDDciaiks------------g~nI~i~n~~~~~-ghGisi 202 (339)
T 2iq7_A 136 VYDVIIDNSAGDSAGGHNTDAFDVGSSTGVYISGANVKNQDDCLAINS------------GTNITFTGGTCSG-GHGLSI 202 (339)
T ss_dssp EESCEEECGGGGGTTCCSCCSEEEESCEEEEEESCEEECSSCSEEESS------------EEEEEEESCEEES-SCCEEE
T ss_pred EEEEEEECCccccccCCCCCcEEEcCcceEEEEecEEecCCCEEEEcC------------CccEEEEeEEEEC-CceEEE
Confidence 99999998743 789999999999999999999999999999998 4999999999988 579999
Q ss_pred ccc---cCCcEEEEEEEeeEEeCCceeEEEEeecCCCceEEEEEEEeEEEcccCe-eEEEEcccCCCCCCCCCCCCCCeE
Q 013402 287 GSE---TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK-GIKIAGDVGDHPDDKFNPNALPVV 362 (443)
Q Consensus 287 gs~---~~~~v~nI~i~n~~~~~~~~gi~i~s~~~~~g~v~nI~~~ni~~~~~~~-~i~i~~~~~~~~~~~~~~~~~~~i 362 (443)
||+ ..+.++||+|+||+|.++.+|++||++.+++|.|+||+|+|++|+++.. ||.|++.|... .....|...+.|
T Consensus 203 GSlg~~~~~~v~nV~v~n~~~~~~~~girIkt~~g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~-~~~~~p~~~~~i 281 (339)
T 2iq7_A 203 GSVGGRSDNTVKTVTISNSKIVNSDNGVRIKTVSGATGSVSGVTYSGITLSNIAKYGIVIEQDYENG-SPTGTPTNGVPI 281 (339)
T ss_dssp EEESSSSCCEEEEEEEEEEEEESCSEEEEEEEETTCCCEEEEEEEEEEEEEEESSEEEEEEEEEETT-EECSCCCSSSCE
T ss_pred CcCCcccCCCEEEEEEEeeEEECCCcEEEEEEeCCCCeEEEEEEEEeEEccCcccccEEEEeecCCC-CCCCCCCCCceE
Confidence 994 4468999999999999999999999999888999999999999999876 99999988652 111223333589
Q ss_pred EeEEEEeEEEeccC--eeEEEEecCCCCeeeEEEEeEEEEeeCCCCCCCeeeeecc
Q 013402 363 NGITIKDVWGTKVQ--QSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVS 416 (443)
Q Consensus 363 ~nIt~~nI~~~~~~--~~~~i~g~~~~~i~ni~~~nv~~~~~~~~~~~~~~c~~v~ 416 (443)
+||+|+||+++... .++.|.|. +.+|+||+|+||+++..+ ..+.|.|+.
T Consensus 282 ~ni~~~ni~gt~~~~~~~~~i~c~-~~~c~ni~~~nv~i~~~~----~~~~C~n~~ 332 (339)
T 2iq7_A 282 TGLTLSKITGSVASSGTNVYILCA-SGACSNWKWSGVSVTGGK----KSTKCSNIP 332 (339)
T ss_dssp EEEEEEEEEEEECTTSEEEEEECC-TTCEEEEEEEEEEEESSB----CCSCCBCCC
T ss_pred EEEEEEeEEEEeCCCCEEEEEEeC-CCcEecEEEEeEEEEcCC----CcccccCCC
Confidence 99999999999875 78899994 889999999999998632 236788876
No 7
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=100.00 E-value=2.4e-53 Score=416.30 Aligned_cols=315 Identities=23% Similarity=0.303 Sum_probs=264.1
Q ss_pred hhHHHHHHHHHHhhhhccCCCeEEEECCCceEEEEe-EeccccEEEEccCcEEEecCCCCCCCCcCCCCCCCcccccCCC
Q 013402 53 LNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSF-NLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGG 131 (443)
Q Consensus 53 ddt~aiq~Ai~~~~~~~~~gg~~V~ip~G~Y~~~~l-~l~s~~tl~~~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (443)
.||+|||+||++|+ +.++++|+||+|+|+ .| .|+++++|.++ +++.+. ...|.
T Consensus 6 ~~t~aiq~ai~~c~---~~gg~~v~vP~G~~~--~l~~l~~~~~l~~~--g~~~~~--~~~w~----------------- 59 (336)
T 1nhc_A 6 TSASEASESISSCS---DVVLSSIEVPAGETL--DLSDAADGSTITFE--GTTSFG--YKEWK----------------- 59 (336)
T ss_dssp SSHHHHHHHGGGCS---EEEEESCEECTTCCE--ECTTCCTTCEEEEE--SEEEEC--CCCSC-----------------
T ss_pred CCHHHHHHHHHHhh---ccCCCeEEECCCEEE--EeeccCCCeEEEEe--ceEEcc--ccccc-----------------
Confidence 57999999999996 566789999999998 35 66788888876 444432 12221
Q ss_pred cceeeEEecCeeeeEEecc-CcEEeCCCchhhhhhccCCCCCCCCeeEEEEeecceEEEeEEEecCCCceEEeeeeeeEE
Q 013402 132 RYMSFIHGDGLQDVVITGE-NGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVV 210 (443)
Q Consensus 132 ~~~~~i~~~~~~nv~I~G~-~G~idG~G~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i~n~~~~~i~~~~~~~v~ 210 (443)
..++.+. .+||+|+|. +|+|||+|+.||+..... ....||++|.|.+|+|++|++++++|+|.|++++. |++++
T Consensus 60 --g~li~~~-~~nv~I~G~~gG~IdG~G~~~w~~~~~~-~~~~rp~~i~~~~~~nv~i~~i~i~nsp~~~i~i~-~~nv~ 134 (336)
T 1nhc_A 60 --GPLIRFG-GKDLTVTMADGAVIDGDGSRWWDSKGTN-GGKTKPKFMYIHDVEDSTFKGINIKNTPVQAISVQ-ATNVH 134 (336)
T ss_dssp --CCSEECC-EESCEEEECTTCEEECCGGGTCCSCTTT-SSSCCCCCEEEEEEEEEEEESCEEECCSSCCEEEE-EEEEE
T ss_pred --CcEEEEe-cCCEEEEcCCCeEEECCccccccccCcC-CCCCCceEEEEeeeCcEEEEEEEEEeCCccEEEEE-eCCEE
Confidence 1355554 599999996 379999999999854322 25678999999999999999999999999999999 99999
Q ss_pred EEeEEEECCCC----CCCCCeecccCCccEEEEeeEEecCCceEEEccCccccccccCCCcccEEEEEEEEeCCCceEEE
Q 013402 211 IRYVTILAPAD----SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 286 (443)
Q Consensus 211 i~~~~I~~~~~----~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~sg~~~~g~~~~~~~~ni~i~n~~~~~~~~gi~i 286 (443)
|++++|.++.. ++|+|||++.+|+||+|+||+|.++||||++++ .+||+|+||+|.. ++||+|
T Consensus 135 i~~~~I~~~~~d~~~~~ntDGidi~~s~nV~I~n~~i~~gDDciaiks------------g~nI~i~n~~~~~-ghGisi 201 (336)
T 1nhc_A 135 LNDFTIDNSDGDDNGGHNTDGFDISESTGVYISGATVKNQDDCIAINS------------GESISFTGGTCSG-GHGLSI 201 (336)
T ss_dssp EESCEEECTTHHHHTCCSCCSEEECSCEEEEEESCEEESSSEEEEESS------------EEEEEEESCEEES-SSEEEE
T ss_pred EEEEEEECCCcccccCCCCCcEEecCCCeEEEEeCEEEcCCCEEEEeC------------CeEEEEEeEEEEC-CcCceE
Confidence 99999999753 789999999999999999999999999999998 4999999999987 579999
Q ss_pred ccc---cCCcEEEEEEEeeEEeCCceeEEEEeecCCCceEEEEEEEeEEEcccCe-eEEEEcccCCCCCCCCCCCCCCeE
Q 013402 287 GSE---TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK-GIKIAGDVGDHPDDKFNPNALPVV 362 (443)
Q Consensus 287 gs~---~~~~v~nI~i~n~~~~~~~~gi~i~s~~~~~g~v~nI~~~ni~~~~~~~-~i~i~~~~~~~~~~~~~~~~~~~i 362 (443)
||+ ..+.++||+|+||+|.++.+|++||++.+++|.|+||+|+|++|+++.. ||.|++.|... .....|...+.|
T Consensus 202 GS~g~~~~~~v~nV~v~n~~~~~t~~girIkt~~g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~-~~~~~p~~~~~i 280 (336)
T 1nhc_A 202 GSVGGRDDNTVKNVTISDSTVSNSANGVRIKTIYKETGDVSEITYSNIQLSGITDYGIVIEQDYENG-SPTGTPSTGIPI 280 (336)
T ss_dssp EEESSSSCCEEEEEEEEEEEEESCSEEEEEEEETTCCCEEEEEEEEEEEEEEESSEEEEEEEEEETT-EECSCCCSSSCE
T ss_pred ccCccccCCCEEEEEEEeeEEECCCcEEEEEEECCCCCEEeeeEEeeEEeeccccccEEEEeecCCC-CCCCCCCCCceE
Confidence 996 3368999999999999999999999999888999999999999999875 99999988652 111223333589
Q ss_pred EeEEEEeEEEeccC--eeEEEEecCCCCeeeEEEEeEEEEeeCCCCCCCeeeeeccc
Q 013402 363 NGITIKDVWGTKVQ--QSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSG 417 (443)
Q Consensus 363 ~nIt~~nI~~~~~~--~~~~i~g~~~~~i~ni~~~nv~~~~~~~~~~~~~~c~~v~~ 417 (443)
+||+|+||+++... .++.|.| ++.+|+||+|+||+++..+ ..+.|.|+..
T Consensus 281 ~~i~~~ni~gt~~~~~~~v~i~c-~~~~c~ni~~~nv~i~~~~----~~~~C~n~~~ 332 (336)
T 1nhc_A 281 TDVTVDGVTGTLEDDATQVYILC-GDGSCSDWTWSGVDLSGGK----TSDKCENVPS 332 (336)
T ss_dssp EEEEEEEEEEEECTTCEEEEEEC-CTTCEEEEEEEEEEEESSB----CCSCCBSCCT
T ss_pred EEEEEEeEEEEeCCCCEEEEEEc-CCCcEecEEEEeEEEEcCC----CCcccCCCCC
Confidence 99999999999876 6889999 4889999999999999632 2467888763
No 8
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=100.00 E-value=4.7e-53 Score=415.65 Aligned_cols=317 Identities=22% Similarity=0.269 Sum_probs=264.6
Q ss_pred hHHHHHHHHHHhhhhccCCCeEEEECCCceEEEEe-EeccccEEEEccCcEEEecCCCCCCCCcCCCCCCCcccccCCCc
Q 013402 54 NTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSF-NLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGR 132 (443)
Q Consensus 54 dt~aiq~Ai~~~~~~~~~gg~~V~ip~G~Y~~~~l-~l~s~~tl~~~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (443)
||+|||+||++|+ +.++++|+||+|+|+. | .|+++++|.++ +++.+. ...|. +
T Consensus 7 ~t~aiq~ai~~c~---~~gg~~v~vP~G~~l~--l~~l~~~~~l~~~--g~~~~~--~~~w~---------~-------- 60 (349)
T 1hg8_A 7 EYSGLATAVSSCK---NIVLNGFQVPTGKQLD--LSSLQNDSTVTFK--GTTTFA--TTADN---------D-------- 60 (349)
T ss_dssp SGGGHHHHHHHCS---EEEECCCEECTTCCEE--ETTCCTTCEEEEC--SEEEEC--CCCCT---------T--------
T ss_pred CHHHHHHHHHhcc---ccCCCEEEECCCEEEE--eeccCCCeEEEEc--Cceecc--ccccc---------C--------
Confidence 6899999999996 4578899999999984 5 67889999887 344432 12331 1
Q ss_pred ceeeEEecCeeeeEEecc-CcEEeCCCchhhhhhccCCCCCCCCeeEEE-E-eecceEEEeEEEecCCCceEEeeeeeeE
Q 013402 133 YMSFIHGDGLQDVVITGE-NGTIDGQGAIWWNMWRQRTLPFTRPNLIEF-M-NSRSIIISNVIFQNSPFWNIHPVYCSNV 209 (443)
Q Consensus 133 ~~~~i~~~~~~nv~I~G~-~G~idG~G~~~~~~~~~~~~~~~~~~~i~~-~-~~~nv~I~~v~i~n~~~~~i~~~~~~~v 209 (443)
..++.+. .+||+|+|. .|+|||+|+.||+........+.||++|.| . .|+|++|++++++|+|.|++++..|+++
T Consensus 61 -g~~i~~~-~~ni~I~G~~~G~IdG~G~~ww~~~~~~~~~~~rP~~i~~~~~~~~nv~I~giti~nsp~~~i~i~~~~nv 138 (349)
T 1hg8_A 61 -FNPIVIS-GSNITITGASGHVIDGNGQAYWDGKGSNSNSNQKPDHFIVVQKTTGNSKITNLNIQNWPVHCFDITGSSQL 138 (349)
T ss_dssp -CCSEEEE-EESCEEEECTTCEEECCGGGTCCSCTTCTTSCCCCSEEEEEEEEESSEEEESCEEECCSSEEEEEESCEEE
T ss_pred -CceEEEE-CccEEEEecCCCEEcCCcchhhhcccccCCCCCCCeEEEEeecCcCcEEEEEEEEEcCCCceEEEeccCCE
Confidence 1356664 499999993 299999999999854432222368999999 7 7889999999999999999999999999
Q ss_pred EEEeEEEECCC-C-----------CCCCCeecccCCccEEEEeeEEecCCceEEEccCccccccccCCCcccEEEEEEEE
Q 013402 210 VIRYVTILAPA-D-----------SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTG 277 (443)
Q Consensus 210 ~i~~~~I~~~~-~-----------~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~sg~~~~g~~~~~~~~ni~i~n~~~ 277 (443)
+|++++|.++. + ++|+|||++.+|+||+|+||+|.++||||++++ .+||+|+||+|
T Consensus 139 ~i~~~~I~~~~~~~~~~~~~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcIaiks------------g~nI~i~n~~~ 206 (349)
T 1hg8_A 139 TISGLILDNRAGDKPNAKSGSLPAAHNTDGFDISSSDHVTLDNNHVYNQDDCVAVTS------------GTNIVVSNMYC 206 (349)
T ss_dssp EEEEEEEECGGGSSCCTTTTTSCSCCSCCSEEEESCEEEEEEEEEEECSSCSEEESS------------EEEEEEEEEEE
T ss_pred EEEEEEEECCCCccccccccccccCCCCCeEEEccccEEEEEeeEEecCCCeEEeeC------------CeEEEEEeEEE
Confidence 99999999853 2 589999999999999999999999999999998 59999999999
Q ss_pred eCCCceEEEccc---cCCcEEEEEEEeeEEeCCceeEEEEeecCCCceEEEEEEEeEEEcccC-eeEEEEcccCCCCCCC
Q 013402 278 SSPFSGIAVGSE---TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR-KGIKIAGDVGDHPDDK 353 (443)
Q Consensus 278 ~~~~~gi~igs~---~~~~v~nI~i~n~~~~~~~~gi~i~s~~~~~g~v~nI~~~ni~~~~~~-~~i~i~~~~~~~~~~~ 353 (443)
.. ++||+|||+ ..+.++||+|+||+|.++.+|++||++.+++|.|+||+|+|++|+++. +||.|++.|... ...
T Consensus 207 ~~-ghGisiGS~G~~~~~~v~nV~v~n~~~~~~~~GirIKt~~g~~G~v~nI~~~ni~~~~v~~~~i~i~~~Y~~~-~~~ 284 (349)
T 1hg8_A 207 SG-GHGLSIGSVGGKSDNVVDGVQFLSSQVVNSQNGCRIKSNSGATGTINNVTYQNIALTNISTYGVDVQQDYLNG-GPT 284 (349)
T ss_dssp ES-SCCEEEEEESSSSCCEEEEEEEEEEEEEEEEEEEEEEEETTCCEEEEEEEEEEEEEEEEEEEEEEEEEEECSS-SBC
T ss_pred eC-CcceEEccccccccCCEEEEEEEEEEEECCCcEEEEEecCCCCccccceEEEEEEEEccccccEEEEeeccCC-CCC
Confidence 87 579999998 457899999999999999999999999988899999999999999986 799999988752 112
Q ss_pred CCCCCCCeEEeEEEEeEEEeccC--eeEEEEecCCCCeeeEEEEeEEEEeeCCCCCCCeeeeeccc
Q 013402 354 FNPNALPVVNGITIKDVWGTKVQ--QSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSG 417 (443)
Q Consensus 354 ~~~~~~~~i~nIt~~nI~~~~~~--~~~~i~g~~~~~i~ni~~~nv~~~~~~~~~~~~~~c~~v~~ 417 (443)
..|...+.|+||+|+||+++... .++.|.|. +.+|+||+|+||+++..+ ....|.|+..
T Consensus 285 ~~p~~~~~i~~I~~~ni~gt~~~~~~~v~i~c~-~~~c~ni~~~nv~i~~~~----~~~~C~n~~~ 345 (349)
T 1hg8_A 285 GKPTNGVKISNIKFIKVTGTVASSAQDWFILCG-DGSCSGFTFSGNAITGGG----KTSSCNYPTN 345 (349)
T ss_dssp SCCCSSEEEEEEEEEEEEEEECTTSEEEEEECC-SSCEEEEEEESCEEECCS----SCCEECSSSS
T ss_pred CcccCCceEEEEEEEeEEEEeCCCCEEEEEEeC-CCcCcCEEEEeEEEEcCC----CCeeeeCCCC
Confidence 22333358999999999998775 68899998 689999999999998632 2367998864
No 9
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=100.00 E-value=6.1e-53 Score=413.54 Aligned_cols=311 Identities=23% Similarity=0.327 Sum_probs=263.6
Q ss_pred HHHHHHHHHHhhhhccCCCeEEEECCCceEEEEe-EeccccEEEEccCcEEEecCCCCCCCCcCCCCCCCcccccCCCcc
Q 013402 55 TKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSF-NLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRY 133 (443)
Q Consensus 55 t~aiq~Ai~~~~~~~~~gg~~V~ip~G~Y~~~~l-~l~s~~tl~~~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (443)
++|||+||++|+ +.++++|+||+|+|+. | .|+++++|.++ +++.+. ...|.
T Consensus 12 ~~aiq~ai~~c~---~~gg~~v~vP~G~~l~--l~~l~~~~~l~~~--g~~~~~--~~~w~------------------- 63 (339)
T 1ia5_A 12 ASSASKSKTSCS---TIVLSNVAVPSGTTLD--LTKLNDGTHVIFS--GETTFG--YKEWS------------------- 63 (339)
T ss_dssp HHHHHHHGGGCS---EEEEESCEECTTCCEE--ECSCCTTCEEEEE--SEEEEC--CCCSC-------------------
T ss_pred hHHHHHHHHHhh---ccCCCeEEECCCEEEE--eeccCCCeEEEEe--CcEEcc--ccccc-------------------
Confidence 679999999996 5668899999999983 5 77899999887 344442 22221
Q ss_pred eeeEEecCeeeeEEecc-CcEEeCCCchhhhhhccCCCCCCCCeeEEEEeecceEEEeEEEecCCCceEEeeeeeeEEEE
Q 013402 134 MSFIHGDGLQDVVITGE-NGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIR 212 (443)
Q Consensus 134 ~~~i~~~~~~nv~I~G~-~G~idG~G~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i~n~~~~~i~~~~~~~v~i~ 212 (443)
..++.+.+ +||+|+|. +|+|||+|+.||+..... ....||++|+|.+|+|++|++++++|+|.|++++..|++++|+
T Consensus 64 g~li~~~~-~nv~I~G~~gG~IdG~G~~~w~~~~~~-~~~~rp~~i~~~~~~nv~i~~i~i~nsp~~~i~i~~~~nv~i~ 141 (339)
T 1ia5_A 64 GPLISVSG-SDLTITGASGHSINGDGSRWWDGEGGN-GGKTKPKFFAAHSLTNSVISGLKIVNSPVQVFSVAGSDYLTLK 141 (339)
T ss_dssp CCSEEEEE-ESCEEEECTTCEEECCGGGTCSSCTTT-SSSCCCCCEEEEEEEEEEEESCEEECCSSCCEEEESCEEEEEE
T ss_pred CcEEEEEc-CcEEEEcCCCeEEeCCCCccccccccC-CCCCCCeEEEEeecCcEEEEEEEEEcCCcceEEEecccCeEEe
Confidence 13566654 99999997 379999999999854322 2567899999999999999999999999999999999999999
Q ss_pred eEEEECCCC----CCCCCeecccCCccEEEEeeEEecCCceEEEccCccccccccCCCcccEEEEEEEEeCCCceEEEcc
Q 013402 213 YVTILAPAD----SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 288 (443)
Q Consensus 213 ~~~I~~~~~----~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~sg~~~~g~~~~~~~~ni~i~n~~~~~~~~gi~igs 288 (443)
+++|.++.+ ++|+|||++.+|+||+|+||+|.++||||++++ .+||+|+||+|.. ++||+|||
T Consensus 142 ~~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~gDDcIaiks------------g~nI~i~n~~~~~-ghGisiGS 208 (339)
T 1ia5_A 142 DITIDNSDGDDNGGHNTDAFDIGTSTYVTISGATVYNQDDCVAVNS------------GENIYFSGGYCSG-GHGLSIGS 208 (339)
T ss_dssp SCEEECGGGTTTTCCSCCSEEEESCEEEEEESCEEECSSCSEEESS------------EEEEEEESCEEES-SSCEEEEE
T ss_pred eEEEECCccccccCCCCCcEEecCCceEEEEeeEEEcCCCeEEEeC------------CeEEEEEeEEEEC-CceEEECc
Confidence 999998643 789999999999999999999999999999998 4999999999987 57999999
Q ss_pred c---cCCcEEEEEEEeeEEeCCceeEEEEeecCCCceEEEEEEEeEEEcccCe-eEEEEcccCCCCCCCCCCCCCCeEEe
Q 013402 289 E---TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK-GIKIAGDVGDHPDDKFNPNALPVVNG 364 (443)
Q Consensus 289 ~---~~~~v~nI~i~n~~~~~~~~gi~i~s~~~~~g~v~nI~~~ni~~~~~~~-~i~i~~~~~~~~~~~~~~~~~~~i~n 364 (443)
+ ..+.++||+|+||+|.++.+|++||++.+++|.|+||+|+|++|+++.. ||.|++.|.. + ...|...+.|+|
T Consensus 209 ~g~~~~~~v~nV~v~n~~~~~t~~girIKt~~g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~-~--~~~p~~~~~i~n 285 (339)
T 1ia5_A 209 VGGRSDNTVKNVTFVDSTIINSDNGVRIKTNIDTTGSVSDVTYKDITLTSIAKYGIVVQQNYGD-T--SSTPTTGVPITD 285 (339)
T ss_dssp ECSSSCCEEEEEEEEEEEEESCSEEEEEEEETTCCCEEEEEEEEEEEEEEESSEEEEEEEEETC-T--TSCCCSSSCEEE
T ss_pred CCcccCCCEEEEEEEeeEEECCCcEEEEEEeCCCCcEEEeeEEEEEEEECcccccEEEEccCCC-C--CCCCcCCceEEE
Confidence 5 3468999999999999999999999999888999999999999999876 9999998843 2 123333358999
Q ss_pred EEEEeEEEeccC--eeEEEEecCCCCeeeEEEEeEEEEeeCCCCCCCeeeeecc
Q 013402 365 ITIKDVWGTKVQ--QSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVS 416 (443)
Q Consensus 365 It~~nI~~~~~~--~~~~i~g~~~~~i~ni~~~nv~~~~~~~~~~~~~~c~~v~ 416 (443)
|+|+||+++... .++.|.|. +.+|+||+|+||+++..+ ..+.|.|+.
T Consensus 286 i~~~ni~gt~~~~~~~v~i~c~-~~~c~ni~~~nv~i~~~~----~~~~C~n~~ 334 (339)
T 1ia5_A 286 FVLDNVHGSVVSSGTNILISCG-SGSCSDWTWTDVSVSGGK----TSSKCTNVP 334 (339)
T ss_dssp EEEEEEEEEECTTSEEEEEECC-TTCEEEEEEEEEEEESSB----CCSCCBSCC
T ss_pred EEEEeEEEEeCCCCEEEEEEeC-CCCEecEEEEeEEEECCC----CCeeeECCC
Confidence 999999999875 78999994 889999999999998632 246788876
No 10
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=100.00 E-value=2.6e-53 Score=414.52 Aligned_cols=308 Identities=18% Similarity=0.175 Sum_probs=260.5
Q ss_pred HHHHHHHHHHhhhhccCCCeEEEECCCceEEEEeEeccccEEEEccCcEEEecCCCCCCCCcCCCCCCCcccccCCCcce
Q 013402 55 TKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYM 134 (443)
Q Consensus 55 t~aiq~Ai~~~~~~~~~gg~~V~ip~G~Y~~~~l~l~s~~tl~~~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (443)
++|||+ +++|+ +.++++|+||+|+|+ .|.|+++++|.++ +++.+. ...|. +
T Consensus 8 ~~aiq~-i~aC~---~~gg~~v~vP~G~~l--~l~l~~~~~l~~~--g~~~~~--~~~w~----------~--------- 58 (335)
T 1k5c_A 8 VDDAKD-IAGCS---AVTLNGFTVPAGNTL--VLNPDKGATVTMA--GDITFA--KTTLD----------G--------- 58 (335)
T ss_dssp TTGGGG-CTTCS---EEEECCEEECTTCCE--EECCCTTCEEEEC--SCEEEC--CCCSC----------S---------
T ss_pred HHHhHH-HHhcc---cCCCCEEEECCCEEE--EEEeCCCeEEEEe--ccEecc--ccccc----------C---------
Confidence 579999 99986 567889999999998 5678888888887 344442 12221 1
Q ss_pred eeEEecCeeeeEEec-cCcEEeCCCchhhhhhccCCCCCCCCeeEEEEeecceEEEeEEEecCCCceEEeeeeee-EEEE
Q 013402 135 SFIHGDGLQDVVITG-ENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN-VVIR 212 (443)
Q Consensus 135 ~~i~~~~~~nv~I~G-~~G~idG~G~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i~n~~~~~i~~~~~~~-v~i~ 212 (443)
.|+.+. .+||+|+| . |+|||+|+.||+..... ....||++|+|..|+ ++|++++++|+|.|++++..|++ |+|+
T Consensus 59 ~~i~~~-~~ni~I~G~~-G~idG~G~~ww~~~~~~-~~~~rP~~i~~~~~~-v~i~giti~nsp~~~i~i~~~~n~v~i~ 134 (335)
T 1k5c_A 59 PLFTID-GTGINFVGAD-HIFDGNGALYWDGKGTN-NGTHKPHPFLKIKGS-GTYKKFEVLNSPAQAISVGPTDAHLTLD 134 (335)
T ss_dssp CSEEEE-EEEEEEECTT-CEEECCGGGTCCSCTTT-SSSCCCCCSEEEEEE-EEEESCEEESCSSCCEEEEEEEEEEEEE
T ss_pred cEEEEE-ccCEEEEeCc-cEEcCChhHhhhccccc-CCCCCCeEEEEeceE-EEEEEEEEECCCcceEEEEccCCeEEEE
Confidence 356665 59999999 6 99999999999754322 256799999999999 99999999999999999999999 9999
Q ss_pred eEEEECCCC-----CCCCCeecccCCccEEEEeeEEecCCceEEEccCccccccccCCCcccEEEEEEEEeCCCceEEEc
Q 013402 213 YVTILAPAD-----SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVG 287 (443)
Q Consensus 213 ~~~I~~~~~-----~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~sg~~~~g~~~~~~~~ni~i~n~~~~~~~~gi~ig 287 (443)
+++|.++.. ++|+||||+ +|+||+|+||+|+++||||++|+ .+||+|+||+|.. ++||+||
T Consensus 135 ~v~I~~~~~d~~~~~~NtDGidi-~s~nV~I~n~~i~~gDDcIaiks------------g~nI~i~n~~~~~-ghGisIG 200 (335)
T 1k5c_A 135 GITVDDFAGDTKNLGHNTDGFDV-SANNVTIQNCIVKNQDDCIAIND------------GNNIRFENNQCSG-GHGISIG 200 (335)
T ss_dssp SCEEECGGGGGGGCCCSCCSEEE-ECSSEEEESCEEESSSCSEEEEE------------EEEEEEESCEEES-SCCEEEE
T ss_pred EEEEECCCCcccccCCCCCeEcc-cCCeEEEEeeEEEcCCCEEEeeC------------CeeEEEEEEEEEC-CccCeEe
Confidence 999999743 789999999 99999999999999999999998 3899999999988 5899999
Q ss_pred ccc-CCcEEEEEEEeeEEeCCceeEEEEeecCCC-ceEEEEEEEeEEEcccC-eeEEEEcccCCCCCCCCCCCCCCeEEe
Q 013402 288 SET-SGGVENVLAEHINLYNVGVGIHVKTNIGRG-GFIRNITVSDVYMENAR-KGIKIAGDVGDHPDDKFNPNALPVVNG 364 (443)
Q Consensus 288 s~~-~~~v~nI~i~n~~~~~~~~gi~i~s~~~~~-g~v~nI~~~ni~~~~~~-~~i~i~~~~~~~~~~~~~~~~~~~i~n 364 (443)
|+. .+.++||+|+||+|.++.+|++||++++++ |.|+||+|+||+|+++. +||.|++.|.. +. ..|.....|+|
T Consensus 201 S~g~~~~v~nV~v~n~~~~~t~~girIKt~~g~~~G~v~nI~f~ni~~~~v~~~~i~i~~~Y~~-~~--~~p~~~~~i~n 277 (335)
T 1k5c_A 201 SIATGKHVSNVVIKGNTVTRSMYGVRIKAQRTATSASVSGVTYDANTISGIAKYGVLISQSYPD-DV--GNPGTGAPFSD 277 (335)
T ss_dssp EECTTCEEEEEEEESCEEEEEEEEEEEEEETTCCSCEEEEEEEESCEEEEEEEEEEEEEEEETS-SS--SSCCSSSCEEE
T ss_pred eccCCCCEEEEEEEeeEEECCCceEEEEEeCCCCcceEeeeEEEEEEEEccccccEEEEeeCCC-CC--CCCCCCceEEE
Confidence 997 689999999999999999999999999888 99999999999999987 69999998842 21 22333358999
Q ss_pred EEEEeEE--Eecc--CeeEEEEecCCCCeeeEEEEeEEEEeeCCCCCCCeeeeeccc
Q 013402 365 ITIKDVW--GTKV--QQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSG 417 (443)
Q Consensus 365 It~~nI~--~~~~--~~~~~i~g~~~~~i~ni~~~nv~~~~~~~~~~~~~~c~~v~~ 417 (443)
|+|+||+ ++.. ..++.|.|.+ +|+||+|+||+++..+.. .+.|.++..
T Consensus 278 I~~~nI~~~Gt~~~~~~~i~i~c~~--~c~ni~~~nv~i~~~~~~---~~~~~~~~~ 329 (335)
T 1k5c_A 278 VNFTGGATTIKVNNAATRVTVECGN--CSGNWNWSQLTVTGGKAG---TIKSDKAKI 329 (335)
T ss_dssp EEECSSCEEEEECTTCEEEEEECSS--EESEEEEEEEEEESSBCC---CEECTTCEE
T ss_pred EEEEEEEEeeEEcCCceEEEEECCC--cCCCEEEEeEEEEcCCCC---ceEeEEeEe
Confidence 9999999 6554 3688999975 999999999999986543 366666654
No 11
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=100.00 E-value=1.2e-49 Score=403.67 Aligned_cols=302 Identities=17% Similarity=0.156 Sum_probs=252.2
Q ss_pred CCCceEEEeeccccCCCcchhHHHHHHHHHHhhhhccCCCeEEEECCC-ceEE------------EEeEeccccEEEEcc
Q 013402 34 YRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPG-VYLT------------GSFNLTSHMTLYLAK 100 (443)
Q Consensus 34 ~~~~~~nV~dyGa~gDg~tddt~aiq~Ai~~~~~~~~~gg~~V~ip~G-~Y~~------------~~l~l~s~~tl~~~~ 100 (443)
..++++||++|||+|| ||+|||+||++|+ +.+|++|+||+| +|++ ++|.|||+++|++++
T Consensus 47 ~~~~~~nV~dfGA~gD----dT~AIqkAIdaCs---~~GGgtV~VPaG~tYLt~sv~~gp~~~~sGpI~LkSnVtL~LdG 119 (600)
T 2x6w_A 47 HCDPSGNVIQPGPNVD----SRQYLQAAIDYVS---SNGGGTITIPAGYTWYLGSYGVGGIAGHSGIIQLRSNVNLNIEG 119 (600)
T ss_dssp CBCTTSCBCCCCTTCC----CHHHHHHHHHHHH---HTTCEEEEECTTCEEEECSCCCGGGGGGTEEEECCTTEEEEECS
T ss_pred CCCcEEeeecCCCCcc----CHHHHHHHHHHhh---hcCCCEEEECCCCEEEecccccccccccccceEEcCceEEeeec
Confidence 3456899999999999 8999999999997 678999999999 9999 999999999999984
Q ss_pred CcEEEecCCCCCCCCcCCCCCCCcccccCCCcceeeEEecCeeeeEEeccCcEEeCCCchhhhhhccCCCCCCCCeeEEE
Q 013402 101 GAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEF 180 (443)
Q Consensus 101 ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~G~~G~idG~G~~~~~~~~~~~~~~~~~~~i~~ 180 (443)
+|+++.+.++|+...+. ..+|.++|.+.+++||+|+|. |+|||+|+.||+.. .....||. +.+
T Consensus 120 --tL~as~d~~~yp~~~~v----------~~~w~slI~~~~~~NItItG~-GtIDGqG~~wW~~~---~~~~~RP~-l~f 182 (600)
T 2x6w_A 120 --RIHLSPFFDLKPFQVFV----------GFDNGDPASSGNLENCHIYGH-GVVDFGGYEFGASS---QLRNGVAF-GRS 182 (600)
T ss_dssp --EEEECGGGTTSCEEEEE----------CCSSSSGGGCCCEEEEEEESS-CEEECTTCCCSSTT---CCEEEEEC-CSE
T ss_pred --EEEEcCChHHCcccccc----------cccccceEEEecceeEEEecc-eeeeCCcccccccc---ccCCCCCE-EEE
Confidence 99999999998642100 123456788899999999998 99999999999622 11113677 889
Q ss_pred EeecceEEEeEEEecC-CCceEEe---eeeeeEEEEeEE----EECCCCCCCCCeecccCCccEEEEeeEEecCCceEEE
Q 013402 181 MNSRSIIISNVIFQNS-PFWNIHP---VYCSNVVIRYVT----ILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAV 252 (443)
Q Consensus 181 ~~~~nv~I~~v~i~n~-~~~~i~~---~~~~~v~i~~~~----I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i 252 (443)
.+|+ |+|++++|+ |.|++++ ..|+||+|+|++ |.+ ++|+||| |+|+||+|.++||||++
T Consensus 183 ~~c~---I~GITi~NSDP~w~I~iG~~~~c~NVtI~nvtfi~aI~s---spNTDGI-------V~I~nc~I~tGDDCIAI 249 (600)
T 2x6w_A 183 YNCS---VTGITFQNGDVTWAITLGWNGYGSNCYVRKCRFINLVNS---SVNADHS-------TVYVNCPYSGVESCYFS 249 (600)
T ss_dssp EEEE---EESCEEESCCCSCSEEECBTTBEEEEEEESCEEECCCCC---SSCCCEE-------EEEECSSSEEEESCEEE
T ss_pred eeeE---EeCeEEECCCCccEEEeCCCCCcccEEEeCeEEcceEec---CCCCCEE-------EEEEeeEEecCCcEEEE
Confidence 9998 999999999 9999999 999999999999 776 7899999 99999999999999999
Q ss_pred -ccCccccccccCCCcccEEEEEEEEeCCCceEEEccccCCcEEEEEEEeeEEeCCceeEEEEeecCCCceEEEEEEEeE
Q 013402 253 -KSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDV 331 (443)
Q Consensus 253 -~sg~~~~g~~~~~~~~ni~i~n~~~~~~~~gi~igs~~~~~v~nI~i~n~~~~~~~~gi~i~s~~~~~g~v~nI~~~ni 331 (443)
|+++ ..++.++ ++..+++||+|||++.+.++||+|+| +||++.+++|.|+||+|+||
T Consensus 250 ~KSGs----------~~ni~~e--~~~~GHgGISIGSe~~ggV~NV~V~N----------rIKt~~G~GG~V~NItfeNI 307 (600)
T 2x6w_A 250 MSSSF----------ARNIACS--VQLHQHDTFYRGSTVNGYCRGAYVVM----------HAAEAAGAGSYAYNMQVENN 307 (600)
T ss_dssp CCCTT----------HHHHEEE--EEECSSSEEEESCEEEEESEEEEEEE----------CGGGCTTTCSEEEEEEEESC
T ss_pred ecCCC----------cCCeEEE--EEcCCCCcEEecccccCcEEEEEEEE----------EEEeecCCCceEEEEEEEEE
Confidence 9973 2456666 55555679999999888999999999 56666677899999999999
Q ss_pred EEcccCeeEEEEcccCCCCCCCCCCCCCCeEEeEEEEeEEEeccCe-------eEEEEecCC-------CCeeeEEEEeE
Q 013402 332 YMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQ-------SGLIQGLKN-------SPFTGICLSNI 397 (443)
Q Consensus 332 ~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nIt~~nI~~~~~~~-------~~~i~g~~~-------~~i~ni~~~nv 397 (443)
+|+++..++.+++... ....+.|+||+|+||+++.... +..|.|.++ .+|++|+|+|+
T Consensus 308 ~m~nV~~~I~i~q~~~--------~~s~~~IsnItfkNItgTsas~aav~~~~g~~i~g~p~~~~~~~~~~Ie~V~~~~~ 379 (600)
T 2x6w_A 308 IAVIYGQFVILGSDVT--------ATVSGHLNDVIVSGNIVSIGERAAFSAPFGAFIDIGPDNSGASNVQDIQRVLVTGN 379 (600)
T ss_dssp EEEESSEEEEEEECBC--------SSCBCEEEEEEEESCEEEECSCCTTSSSCEEEEEECCCTTCCSSSCCEEEEEEESC
T ss_pred EEEccceEEEeCCCCC--------CCCCceEEEEEEEeEEEEeccccccccccceEEEecCcccccccccceeEEEEece
Confidence 9999998888875411 2234589999999999987542 256777664 58999999999
Q ss_pred EEEee
Q 013402 398 NLQGV 402 (443)
Q Consensus 398 ~~~~~ 402 (443)
++...
T Consensus 380 ~~~~~ 384 (600)
T 2x6w_A 380 SFYAP 384 (600)
T ss_dssp EEECC
T ss_pred EEEcC
Confidence 99654
No 12
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=100.00 E-value=3.8e-43 Score=362.11 Aligned_cols=307 Identities=17% Similarity=0.212 Sum_probs=242.2
Q ss_pred eeccccCCCcchhHHHHHHHHHHhhh----hcc------------------CCCeEEEECCCceEE---EEeEeccccE-
Q 013402 42 TDFGGVGDGKTLNTKAFREAIYRIQH----LRR------------------SGGTLLYVPPGVYLT---GSFNLTSHMT- 95 (443)
Q Consensus 42 ~dyGa~gDg~tddt~aiq~Ai~~~~~----~~~------------------~gg~~V~ip~G~Y~~---~~l~l~s~~t- 95 (443)
..|||++||.++.+.+|.-.-+.+.. ... .++++|+||+|+|++ |+|.|+|+++
T Consensus 146 ~~~~~~~dg~~~~~~~l~ifa~p~~~~~~~P~~~~~~~~~~~~g~~~~~~~~ggg~v~vP~G~yl~g~~G~i~l~s~~~~ 225 (549)
T 1x0c_A 146 DLISLAPSGARQPENALLIFASPFENSSTKPQPGSPNSIAPAPGRVLGLNTTSASTVVFNPGVYYFTGHDHMVLSSSVTW 225 (549)
T ss_dssp GEEEETTTTEEEESEEEEEEEECCCCTTTSCCTTCSSEECCCSEECCCTTTCCCSEEEECSEEEECCTTCCEEECTTCCE
T ss_pred ccccccccCcCCCcceEEEEcCChhhccCCCCcCCCCceeeccccccccccCCCCEEEECCeEEecCCceEEEecCCCCe
Confidence 46999999999998887722222211 000 468899999999997 5999999999
Q ss_pred EEEccCcEEEecCCCCCCCCcCCCCCCCcccccCCCcceeeEEecCeeeeEEeccCcEEeCCCchhhhhhccCC--CCCC
Q 013402 96 LYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRT--LPFT 173 (443)
Q Consensus 96 l~~~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~G~~G~idG~G~~~~~~~~~~~--~~~~ 173 (443)
|++++|+.|+++ ++...+++||+|+|. |+|||+|..||....... ....
T Consensus 226 L~l~~GA~L~gs----------------------------~~~~~~~~nv~ItG~-GtIDG~G~~ww~~~~~~~~~~~~~ 276 (549)
T 1x0c_A 226 VYFAPGAYVKGA----------------------------VEFLSTASEVKASGH-GVLSGEQYVWYADPDEGYQKASGA 276 (549)
T ss_dssp EEECTTEEEESC----------------------------EEECCCSSEEEEESS-CEEECTTSCTTEEGGGTTEECGGG
T ss_pred EecCCCCEEEEE----------------------------EEEecCceeEEEEee-EEEECCCceecccCcccccccccC
Confidence 999999999853 223348899999998 999999999995321110 1223
Q ss_pred CCeeEEE------EeecceEEEeEEEecCCCceEEee-ee-ee--EEEEeEEEECCCCCCCCCeecccCCccEEEEeeEE
Q 013402 174 RPNLIEF------MNSRSIIISNVIFQNSPFWNIHPV-YC-SN--VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYI 243 (443)
Q Consensus 174 ~~~~i~~------~~~~nv~I~~v~i~n~~~~~i~~~-~~-~~--v~i~~~~I~~~~~~~n~DGi~~~~s~nv~I~n~~i 243 (443)
||++|.| .+|+|++|+|++++|+++|++++. .| ++ ++|+++++.++. .+|+|||++. +||+|+||+|
T Consensus 277 rp~~i~~~~~~~~~~c~nV~I~Giti~Nsp~w~i~i~~~~~~ni~V~I~n~~i~~~~-~~NTDGidi~--~nV~I~n~~i 353 (549)
T 1x0c_A 277 NNNGLRMWRGTLGNSSQTFVLNGVTVSAPPFNSMDWSGNSLDLITCRVDDYKQVGAF-YGQTDGLEMY--PGTILQDVFY 353 (549)
T ss_dssp CSCCCCSEEEECCSSCEEEEEESCEEECCSSCSEEEECSCGGGEEEEEEEEEEECCC-BTTCCCCBCC--TTCEEEEEEE
T ss_pred CCceEEEeeccccCCceEEEEECcEEECCCceeEEeeccCCCCCeEEEEeeEeEcCC-CCCCCccccc--CCEEEEeeEE
Confidence 6777777 999999999999999999999955 56 69 999999998753 5689999998 9999999999
Q ss_pred ecCCceEEEccCccccccccCCCcccEEEEEEEEeCC-Cce-EEEccccCCcEEEEEEEeeEEeCCce------eEEEEe
Q 013402 244 STGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP-FSG-IAVGSETSGGVENVLAEHINLYNVGV------GIHVKT 315 (443)
Q Consensus 244 ~~gdD~i~i~sg~~~~g~~~~~~~~ni~i~n~~~~~~-~~g-i~igs~~~~~v~nI~i~n~~~~~~~~------gi~i~s 315 (443)
+++||||++++ +||+|+||+|+.+ +++ |++|++ .+.++||+|+||+|.++.. |..|++
T Consensus 354 ~~gDDcIaIks-------------~NI~I~n~~~~~~~g~~~IsiGs~-~~~V~NV~v~n~~i~~s~~~k~~~~g~iI~~ 419 (549)
T 1x0c_A 354 HTDDDGLKMYY-------------SNVTARNIVMWKESVAPVVEFGWT-PRNTENVLFDNVDVIHQAYANAGNNPGIFGA 419 (549)
T ss_dssp EESSCCEECCS-------------SSEEEEEEEEEECSSSCSEECCBS-CCCEEEEEEEEEEEEECCCCSGGGCCCSEEE
T ss_pred eCCCCEEEECC-------------CCEEEEeeEEEcCCCCceEEECCC-CCcEEEEEEEeeEEECccccccccceEEEec
Confidence 99999999985 8999999999865 567 999995 5789999999999998753 444776
Q ss_pred e--c--C------C-CceEEEEEEEeEEEcccC-eeEEEEcccCCCCCCCCCCCCCCeEEeEEEEeEEEeccC------e
Q 013402 316 N--I--G------R-GGFIRNITVSDVYMENAR-KGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQ------Q 377 (443)
Q Consensus 316 ~--~--~------~-~g~v~nI~~~ni~~~~~~-~~i~i~~~~~~~~~~~~~~~~~~~i~nIt~~nI~~~~~~------~ 377 (443)
. . + + .|.|+||+|+||+|+++. +++.+...+.. + ...++||+|+||++++.. .
T Consensus 420 ~~~~~~g~~~~~~d~~G~i~nI~f~NI~i~nv~~~g~~~~~~~g~-------p--g~~I~nI~i~NI~i~~~~~~~~~~~ 490 (549)
T 1x0c_A 420 VNNYLYAPDGLSSNHSTGNSNMTVRNITWSNFRAEGSSSALFRIN-------P--IQNLDNISIKNVSIESFEPLSINTT 490 (549)
T ss_dssp CCBTTTCTTSCCSCCCCBEEEEEEEEEEEEEEEEEEEECCSEEEC-------C--SEEEEEEEEEEEEEEEECCGGGTCS
T ss_pred ccccccCccccCcCCCceEccEEEEeEEEEeEEEeceEEeeecCC-------C--CCcCccEEEEEEEEEcccccccccc
Confidence 1 1 2 2 678999999999999986 66655433211 2 226999999999987654 2
Q ss_pred eEEEEecCC------CCeeeEEEEeEEEEeeC
Q 013402 378 SGLIQGLKN------SPFTGICLSNINLQGVA 403 (443)
Q Consensus 378 ~~~i~g~~~------~~i~ni~~~nv~~~~~~ 403 (443)
+..+.|.++ .+|+||+|+||++.+..
T Consensus 491 ~~~i~G~~~~~~~~~~~v~nI~f~NV~i~G~~ 522 (549)
T 1x0c_A 491 ESWMPVWYDLNNGKQITVTDFSIEGFTVGNTT 522 (549)
T ss_dssp CEEECCCBBTTTCCBCCEEEEEEEEEEETTEE
T ss_pred ceEEeCCCccccccceeeeeEEEEeEEEeCeE
Confidence 456666544 68999999999997763
No 13
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=100.00 E-value=1.1e-40 Score=343.38 Aligned_cols=270 Identities=21% Similarity=0.271 Sum_probs=221.8
Q ss_pred CCCeEEEECCCceEE-------------EEeEeccccE-EEEccCcEEEecCCCCCCCCcCCCCCCCcccccCCCcceee
Q 013402 71 SGGTLLYVPPGVYLT-------------GSFNLTSHMT-LYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPGGRYMSF 136 (443)
Q Consensus 71 ~gg~~V~ip~G~Y~~-------------~~l~l~s~~t-l~~~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (443)
.+|++||||||+|++ |+|.|+|+++ |++++||+|+++
T Consensus 229 ~ggg~v~vP~G~yl~~~~~~~gpc~~g~G~i~lkSnvt~L~L~~GA~l~g~----------------------------- 279 (574)
T 1ogo_X 229 GAKSILYFPPGVYWMNQDQSGNSGKLGSNHIRLNSNTYWVYLAPGAYVKGA----------------------------- 279 (574)
T ss_dssp CSSSEEEECSEEEEECBCTTCCBSCSSSCCEECCTTCCEEEECTTEEEESC-----------------------------
T ss_pred CCCCEEEECCcEEEEeccccCCcccccceEEEecCCCceEEecCCcEEEcc-----------------------------
Confidence 588999999999999 5899999999 999999999842
Q ss_pred EEecCeeeeEEeccCcEEeCCCchhhhhhccC-CCCCCCCeeEEEE------eecceEEEeEEEecCCCceEEeeeeeeE
Q 013402 137 IHGDGLQDVVITGENGTIDGQGAIWWNMWRQR-TLPFTRPNLIEFM------NSRSIIISNVIFQNSPFWNIHPVYCSNV 209 (443)
Q Consensus 137 i~~~~~~nv~I~G~~G~idG~G~~~~~~~~~~-~~~~~~~~~i~~~------~~~nv~I~~v~i~n~~~~~i~~~~~~~v 209 (443)
+.+.+++||+|+|. |+|||+|..||...... .....||.++.+. +|+|++|+|++++|+++|++++..|++|
T Consensus 280 i~~~~~~nv~ItG~-GtIDG~G~~ww~~~~~~~~~~~~rp~~i~~~~~~~~~~c~NV~I~Giti~NSp~w~i~~~~c~nV 358 (574)
T 1ogo_X 280 IEYFTKQNFYATGH-GILSGENYVYQANAGDNYIAVKSDSTSLRMWWHNNLGGGQTWYCVGPTINAPPFNTMDFNGNSGI 358 (574)
T ss_dssp EEECCSSCEEEESS-CEEECTTSCTTCBTTTTTBSCCCTTTBCCSEEECSCCSSEEEEEESCEEECCSSCSEEECSSSCE
T ss_pred EEEeCceeEEEEeC-EEEeCCCcccccccccccccccCCcceEEEEeccccCCceeEEEECeEEECCCCcEEeecCCCCh
Confidence 45678899999998 99999999999632211 1122478888877 9999999999999999999999999999
Q ss_pred --EEEeEEEECCCCCCCCCeecccCCccEEEEeeEEecCCceEEEccCccccccccCCCcccEEEEEEEEeCC-Cce-EE
Q 013402 210 --VIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP-FSG-IA 285 (443)
Q Consensus 210 --~i~~~~I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~sg~~~~g~~~~~~~~ni~i~n~~~~~~-~~g-i~ 285 (443)
+|+++++.++. ..++|||++. +||+|+||+|.++||||++++ +||+|+||+++.+ +++ |+
T Consensus 359 ~~~I~nv~i~~~~-~~nTDGIDi~--~NV~I~nc~I~~gDDcIaIks-------------~NI~I~nc~i~~g~g~g~Is 422 (574)
T 1ogo_X 359 SSQISDYKQVGAF-FFQTDGPEIY--PNSVVHDVFWHVNDDAIKIYY-------------SGASVSRATIWKCHNDPIIQ 422 (574)
T ss_dssp EEEEEEEEEECCC-STTCCCCBCC--TTCEEEEEEEEESSCSEECCS-------------TTCEEEEEEEEECSSSCSEE
T ss_pred hhEEEeeEeeCCC-CCCCccCccc--CCEEEEeeEEECCCCEEEECC-------------ccEEEEeEEEECCCCCceEE
Confidence 99999998743 4469999998 999999999999999999985 8999999999876 456 99
Q ss_pred EccccCCcEEEEEEEeeEEeCCce--------eEEEEee---------cCCCceEEEEEEEeEEEcccCeeEEEEcccCC
Q 013402 286 VGSETSGGVENVLAEHINLYNVGV--------GIHVKTN---------IGRGGFIRNITVSDVYMENARKGIKIAGDVGD 348 (443)
Q Consensus 286 igs~~~~~v~nI~i~n~~~~~~~~--------gi~i~s~---------~~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~ 348 (443)
|||. .+.++||+|+||+|.+... +..|++. ....| | ||+|+||+++++.+++ |.. +
T Consensus 423 IGS~-~g~V~NV~v~N~~i~~~~~~~~~~~~~g~iiGs~~~y~~~~~~~~g~g-V-NI~f~NI~~~~v~~~i-i~i-~-- 495 (574)
T 1ogo_X 423 MGWT-SRDISGVTIDTLNVIHTRYIKSETVVPSAIIGASPFYASGMSPDSRKS-I-SMTVSNVVCEGLCPSL-FRI-T-- 495 (574)
T ss_dssp CCSS-CCCEEEEEEEEEEEEECCCSSCCTTTTCEEEEECCCSSSSCCCEEEEE-E-EEEEEEEEECSSBCEE-EEE-C--
T ss_pred EcCC-CCcEEEEEEEeEEEECCcccceeccccceeeccccccccccccCCCce-E-EEEEEeEEEEceeEee-EEE-C--
Confidence 9995 5789999999999987643 3333221 01124 8 9999999999998885 432 1
Q ss_pred CCCCCCCCCCCCeEEeEEEEeEEEec------cC-eeEEEEecCCCCeeeEEEEeEEEEeeC
Q 013402 349 HPDDKFNPNALPVVNGITIKDVWGTK------VQ-QSGLIQGLKNSPFTGICLSNINLQGVA 403 (443)
Q Consensus 349 ~~~~~~~~~~~~~i~nIt~~nI~~~~------~~-~~~~i~g~~~~~i~ni~~~nv~~~~~~ 403 (443)
+ .+.|+||+|+||++++ .. .+..+.|.+ .+|+||+|+||++....
T Consensus 496 -------p--~~~I~nI~~~NI~i~g~~~~~~~~~~~~~i~G~~-~~v~nI~~~NV~i~g~~ 547 (574)
T 1ogo_X 496 -------P--LQNYKNFVVKNVAFPDGLQTNSIGTGESIIPAAS-GLTMGLAISAWTIGGQK 547 (574)
T ss_dssp -------C--SEEEEEEEEEEEEETTCBCCSTTCTTCEEECCCT-TCCEEEEEEEEEETTEE
T ss_pred -------C--CCCEEEEEEEeEEEeCccccccccccceeEecCC-CccceEEEEeEEEeCEE
Confidence 1 1369999999999876 22 245677877 89999999999997753
No 14
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=100.00 E-value=1.1e-39 Score=328.87 Aligned_cols=300 Identities=16% Similarity=0.185 Sum_probs=227.2
Q ss_pred CCCCceEE-EeeccccCCCcchhHHHHHHHHHHhhhhccC-CCeEEEECCCceEEEEeEeccccEEEEccCcEEEecCC-
Q 013402 33 RYRNDKIS-ITDFGGVGDGKTLNTKAFREAIYRIQHLRRS-GGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQD- 109 (443)
Q Consensus 33 ~~~~~~~n-V~dyGa~gDg~tddt~aiq~Ai~~~~~~~~~-gg~~V~ip~G~Y~~~~l~l~s~~tl~~~~ga~l~~~~~- 109 (443)
.....+++ |++|||+|||.+|||+|||+||++|+ +. ++++|+||+|+|++++|.|+|+++|++++|++|+++.+
T Consensus 16 ~~~~~~~~~V~dfGA~gDG~tDdT~Aiq~Aidac~---~~~ggg~V~vP~GtYl~g~I~lks~v~L~l~~GatL~~s~~t 92 (464)
T 1h80_A 16 TQQDVNYDLVDDFGANGNDTSDDSNALQRAINAIS---RKPNGGTLLIPNGTYHFLGIQMKSNVHIRVESDVIIKPTWNG 92 (464)
T ss_dssp SCCSEEEEHHHHHCCCTTSSSBCHHHHHHHHHHHH---TSTTCEEEEECSSEEEECSEECCTTEEEEECTTCEEEECCCT
T ss_pred CCCcceeeehhccCcCCCCCchhHHHHHHHHHHHh---hccCCcEEEECCCeEEEeeEeccCceEEEEcCCcEEEeccCC
Confidence 34467888 99999999999999999999999986 44 78999999999999999999999999999999999864
Q ss_pred -CCCCCCcCCCCCCCcccccCCCcceeeE--EecCeeeeEEeccCc---EEeCCCchhhhhhccCCCCCCCCeeEEEEee
Q 013402 110 -TWNWPLIAPLPSYGRGRERPGGRYMSFI--HGDGLQDVVITGENG---TIDGQGAIWWNMWRQRTLPFTRPNLIEFMNS 183 (443)
Q Consensus 110 -~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~~~~~nv~I~G~~G---~idG~G~~~~~~~~~~~~~~~~~~~i~~~~~ 183 (443)
..+|+ .+. ++.+++|++|+|. | +|||+|.. ..+|++|.|.+|
T Consensus 93 d~~~y~--------------------~~~~~~~~~~~nItI~G~-Gg~~~iDG~G~~-----------~~rp~~i~~~~~ 140 (464)
T 1h80_A 93 DGKNHR--------------------LFEVGVNNIVRNFSFQGL-GNGFLVDFKDSR-----------DKNLAVFKLGDV 140 (464)
T ss_dssp TCSCEE--------------------EEEESSSSCEEEEEEEEC-TTCEEEECTTCS-----------CCBEEEEEECSE
T ss_pred CcccCC--------------------ceEeecccCccceEEECc-CcceEEeCCCCC-----------CCCceEEEEEee
Confidence 33332 111 2378999999998 8 99998752 347889999999
Q ss_pred cceEEEeEEEecCCCceEEeeeeeeEEEEeEEEECCCCCCCCCeecccCCccEEEEeeEEecCCceEEEccCcccccccc
Q 013402 184 RSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAY 263 (443)
Q Consensus 184 ~nv~I~~v~i~n~~~~~i~~~~~~~v~i~~~~I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~sg~~~~g~~~ 263 (443)
+|++|++++++| .|.++ .|.+|.+ . |+|||++ .|+||+|+||+|.++||++....
T Consensus 141 ~Nv~I~gIti~n--~w~ih--~s~~V~i-----~------NtDGi~i-~s~nV~I~n~~I~~gddgiGs~~--------- 195 (464)
T 1h80_A 141 RNYKISNFTIDD--NKTIF--ASILVDV-----T------ERNGRLH-WSRNGIIERIKQNNALFGYGLIQ--------- 195 (464)
T ss_dssp EEEEEEEEEEEC--CSCBS--CSEEECE-----E------EETTEEE-EEEEEEEEEEEEESCCTTCEEEE---------
T ss_pred ccEEEeeeEEec--cceEe--eceeeee-----e------cCCCcee-eccCEEEeceEEecCCCeEEecc---------
Confidence 999999999999 56543 4444322 2 4799998 69999999999999999875211
Q ss_pred CCCcccEEEEEEEEeCCCceEEEccc-------cCCcEEEEEEEeeEEeCCceeEEEEeecCCCceEEEEEEEeEEEccc
Q 013402 264 GHPSSGITIRRVTGSSPFSGIAVGSE-------TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENA 336 (443)
Q Consensus 264 ~~~~~ni~i~n~~~~~~~~gi~igs~-------~~~~v~nI~i~n~~~~~~~~gi~i~s~~~~~g~v~nI~~~ni~~~~~ 336 (443)
..+++||+|+||+|.+ ++||+|++. ..+.++||+|+||+|.+...+|.|++. .+.++||+|+||+++++
T Consensus 196 ~~~~~NV~V~n~~~~g-g~GIrIktg~d~IG~~~~g~v~NI~~~Ni~~~nv~~~I~I~p~---~~~isnItfeNI~~t~~ 271 (464)
T 1h80_A 196 TYGADNILFRNLHSEG-GIALRMETDNLLMKNYKQGGIRNIFADNIRCSKGLAAVMFGPH---FMKNGDVQVTNVSSVSC 271 (464)
T ss_dssp ESEEEEEEEEEEEEES-SEEEEEECCCHHHHHHTCCEEEEEEEEEEEEESSSEEEEEECT---TCBCCCEEEEEEEEESS
T ss_pred cCCEeEEEEEeeEEEC-CCEEEEEeCCceeccCCCCcEEEEEEEeEEEECCceeEEEeCC---CceEeEEEEEEEEEEcc
Confidence 1248999999999999 899998765 346799999999999999999999853 35789999999999999
Q ss_pred CeeEEEEcccCCCCCCCCCCCCCCeEEeEEEEeEE------Eec---------c-CeeEEEEec-------------CCC
Q 013402 337 RKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVW------GTK---------V-QQSGLIQGL-------------KNS 387 (443)
Q Consensus 337 ~~~i~i~~~~~~~~~~~~~~~~~~~i~nIt~~nI~------~~~---------~-~~~~~i~g~-------------~~~ 387 (443)
..++.|++.|... +++... ...+.+|+|-. ++. . ..|+.|.+. +..
T Consensus 272 ~~aI~i~q~y~~~----fd~~~~-~~~~~~~~~~~e~~~~~G~~~~~~~~~ng~~~~~~~i~~~~~~~~~~~~~~~~~~g 346 (464)
T 1h80_A 272 GSAVRSDSGFVEL----FSPTDE-VHTRQSWKQAVESKLGRGCAQTPYARGNGGTRWAARVTQKDACLDKAKLEYGIEPG 346 (464)
T ss_dssp SCSEEECCCCCEE----CC----------------------CCBCCC----------CEEBCSCHHHHHHHHHHTCCCCC
T ss_pred ceeEEEecCcccc----cCcccc-ccccceeccccccccccCceeEEEeccCCcccCceEEccccceeccccccccccCC
Confidence 9999999887642 222221 34455554433 110 0 123334333 555
Q ss_pred CeeeEEEEeEEEEe
Q 013402 388 PFTGICLSNINLQG 401 (443)
Q Consensus 388 ~i~ni~~~nv~~~~ 401 (443)
.+++++++||+++.
T Consensus 347 ~~~~~~~~nv~~~~ 360 (464)
T 1h80_A 347 SFGTVKVFDVTARF 360 (464)
T ss_dssp BCSSEEEEEEEEEC
T ss_pred ceEEEEEEEEEecc
Confidence 68899999999866
No 15
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=100.00 E-value=2e-39 Score=330.71 Aligned_cols=304 Identities=18% Similarity=0.220 Sum_probs=231.4
Q ss_pred CCceEEEeeccccCCCcchhHHHHHHHHHHhhhhccCCCeEEEECCCceEE-EEeEeccccEEEEcc--CcEEEecCCCC
Q 013402 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLT-GSFNLTSHMTLYLAK--GAVIKATQDTW 111 (443)
Q Consensus 35 ~~~~~nV~dyGa~gDg~tddt~aiq~Ai~~~~~~~~~gg~~V~ip~G~Y~~-~~l~l~s~~tl~~~~--ga~l~~~~~~~ 111 (443)
.++.++|+||||+|||.+|||+|||+||++ + ++|+||+|+|++ ++|.|+++++|+++. .++|+++.+..
T Consensus 19 ~~~~~nV~dfGA~gDG~tDdT~Aiq~Ai~~-------G-g~V~iP~GtYlis~~l~l~snv~L~g~g~~~t~L~~~~~~p 90 (609)
T 3gq8_A 19 KQFGVSVKTYGAKGDGVTDDIRAFEKAIES-------G-FPVYVPYGTFMVSRGIKLPSNTVLTGAGKRNAVIRFMDSVG 90 (609)
T ss_dssp CSSSEEGGGGTCCCEEEEECHHHHHHHHHT-------S-SCEEECSEEEEESSCEEECSSEEEEESCTTTEEEEECTTCC
T ss_pred CCcEEEeEecccCCCCCchhHHHHHHHHHc-------C-CEEEECCccEEEeCceEECCCcEEEEeeCCCCEEEeCCCCC
Confidence 356899999999999999999999999992 3 899999999999 799999999999986 36787765432
Q ss_pred CCCCcCCCCCCCcccccCCCcceeeEEecCeeeeEEeccCcEEeCCCchhhhhhccCCCCCCCCeeEEEEeecceEEEeE
Q 013402 112 NWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 191 (443)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~G~~G~idG~G~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~~v 191 (443)
.|.. .+..++.+.+++||+|+|. +|||+|+.||... ......||++|.|.+|+|++|+++
T Consensus 91 ~~~~----------------li~~lI~a~~~~NItItG~--TIDGNG~~~g~~~--~~~g~~RP~lI~f~~c~NV~I~gV 150 (609)
T 3gq8_A 91 RGES----------------LMYNENVTTGNENIFLSSF--TLDGNNKRLGQGI--SGIGGSRESNLSIRACHNVYIRDI 150 (609)
T ss_dssp SSCC----------------SEEESCTTTCCEEEEEEEE--EEECCGGGGCSSC--CCSSTTTTCSEEEESCEEEEEEEE
T ss_pred CCCc----------------eeeeeeeecccccEEEEee--EEECCccccCccc--ccCCCCCccEEEEEeeceEEEEee
Confidence 2210 1124456788999999994 9999998554321 123457899999999999999999
Q ss_pred EEecCCCceEEeeeeeeEEEEeEEEECCCCCCCCCeecccC------CccEEEEeeEEec-CCceEEEccCccccccccC
Q 013402 192 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDS------SSNVCIEDSYIST-GDDLVAVKSGWDEYGIAYG 264 (443)
Q Consensus 192 ~i~n~~~~~i~~~~~~~v~i~~~~I~~~~~~~n~DGi~~~~------s~nv~I~n~~i~~-gdD~i~i~sg~~~~g~~~~ 264 (443)
+++|++.+++.+ .++.. | ||+++++ |+||+|+||+|++ +||||++++
T Consensus 151 ti~NSp~~gI~I-------------~~~~~--N-DGid~DGi~fd~~S~NV~I~Nc~I~~tGDDcIaIks---------- 204 (609)
T 3gq8_A 151 EAVDCTLHGIDI-------------TCGGL--D-YPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHH---------- 204 (609)
T ss_dssp EEESCSSCSEEE-------------ECSSS--S-CCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECS----------
T ss_pred EEEeCCCCCeEE-------------eCCCC--C-ccccCCCccccccceeEEEEeeEEEecCCCEEEecC----------
Confidence 999999865544 33332 2 6666666 9999999999955 999999987
Q ss_pred CCcccEEEEEEEEeCC-----CceEEEccccCCcEEEEEEEeeEEeCCceeEEEEeecCCCceEEEEEEEeE-EEcccC-
Q 013402 265 HPSSGITIRRVTGSSP-----FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDV-YMENAR- 337 (443)
Q Consensus 265 ~~~~ni~i~n~~~~~~-----~~gi~igs~~~~~v~nI~i~n~~~~~~~~gi~i~s~~~~~g~v~nI~~~ni-~~~~~~- 337 (443)
++||+|+||+|+++ ++||+|+++ .+||+|+||++.++.+|++||++. +++.++||+|+|+ .+++..
T Consensus 205 --seNI~I~Nc~~~gp~G~S~~~GIsIGsg----s~NVtV~Nc~i~nt~~GIrIKt~~-~~~~v~NV~I~n~vs~~nvrs 277 (609)
T 3gq8_A 205 --SQYINILNCYSHDPRLTANCNGFEIDDG----SRHVVLSNNRSKGCYGGIEIKAHG-DAPAAYNISINGHMSVEDVRS 277 (609)
T ss_dssp --CEEEEEESCEEECCSSCSSCCSEEECTT----CEEEEEESEEEESSSEEEEEEECT-TSCCCEEEEEEEEEEESCSEE
T ss_pred --CeeEEEEeEEEECCCCCCCcccEEccCC----cccEEEEeeEEECCCCEEEEEecC-CCCccccEEEECCEeecCceE
Confidence 79999999999655 589999954 499999999999999999999875 4689999999995 556543
Q ss_pred eeEEEEcccCCCCCCCCCCCCCCeEEeEEEEeEEEeccCe-----------eEEEE-------------ecCC-------
Q 013402 338 KGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQ-----------SGLIQ-------------GLKN------- 386 (443)
Q Consensus 338 ~~i~i~~~~~~~~~~~~~~~~~~~i~nIt~~nI~~~~~~~-----------~~~i~-------------g~~~------- 386 (443)
+.++.-+.+.. . +|.. ....||+++|+....... +..+. |.+.
T Consensus 278 yn~r~iG~~~a--~---dp~s-~~a~nV~l~n~~~~~p~~~~~~y~~~~~r~l~vs~~~~v~i~~~~~~~d~~y~~~~~~ 351 (609)
T 3gq8_A 278 YNFRHIGHHAA--T---APQS-VSAKNIVASNLVSIRPNNKRGFQDNATPRVLAVSAYYGVVINGLTGYTDDPNLLTETV 351 (609)
T ss_dssp EEEEETTSCST--T---SCCC-SSCEEEEEEEEEEESCCCTTCHHHHCCCEEEEEESCEEEEEEEEEEECSCTTSCCSEE
T ss_pred ecceEEccccC--C---CCCc-ceecceEeecceEEeecccCceeeCCCcceEEEEcCCCeEEcCceEccCCccccCCce
Confidence 56665544421 0 1222 257899999998865421 22222 2222
Q ss_pred ----CCeeeEEEEeEEEEeeCCC
Q 013402 387 ----SPFTGICLSNINLQGVAGP 405 (443)
Q Consensus 387 ----~~i~ni~~~nv~~~~~~~~ 405 (443)
-.++|++|.+|.++.-...
T Consensus 352 ~~~q~~~~~~~l~~~~i~gf~~a 374 (609)
T 3gq8_A 352 VSVQFRARNCSLNGVVLTGFSNS 374 (609)
T ss_dssp EEEETTCEEEEEEEEEEESCTTC
T ss_pred EEEEEecceeEEcceEEecccCC
Confidence 1478999999999886543
No 16
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=100.00 E-value=5.1e-39 Score=332.26 Aligned_cols=304 Identities=19% Similarity=0.232 Sum_probs=230.3
Q ss_pred CCceEEEeeccccCCCcchhHHHHHHHHHHhhhhccCCCeEEEECCCceEE-EEeEeccccEEEEcc--CcEEEecCCCC
Q 013402 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLT-GSFNLTSHMTLYLAK--GAVIKATQDTW 111 (443)
Q Consensus 35 ~~~~~nV~dyGa~gDg~tddt~aiq~Ai~~~~~~~~~gg~~V~ip~G~Y~~-~~l~l~s~~tl~~~~--ga~l~~~~~~~ 111 (443)
.++.++|++|||+|||.+|||+|||+||++ + ++|+||+|+|++ ++|.|+++++|+++. .++|+++.+..
T Consensus 19 ~~~~~nV~dfGA~gDG~tDdT~Aiq~Ai~a-------G-g~V~IPaGtYlisg~I~L~snv~L~Geg~~~t~Lk~~~d~p 90 (772)
T 3gqn_A 19 KQFGVSVKTYGAKGDGVTDDIRAFEKAIES-------G-FPVYVPYGTFMVSRGIKLPSNTVLTGAGKRNAVIRFMDSVG 90 (772)
T ss_dssp CSSSEESGGGTCCCEEEEECHHHHHHHHHT-------T-SCEEECSEEEEESSCEEECSSCEEEEEEEEEEEEEECTTCC
T ss_pred CCcEEEeEecccCCCCChhHHHHHHHHHHc-------C-CEEEECCccEEEEeEEEECCCcEEEEecCCCCEEEeCCCCC
Confidence 356899999999999999999999999992 3 899999999999 799999999999975 35777765432
Q ss_pred CCCCcCCCCCCCcccccCCCcceeeEEecCeeeeEEeccCcEEeCCCchhhhhhccCCCCCCCCeeEEEEeecceEEEeE
Q 013402 112 NWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 191 (443)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~G~~G~idG~G~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~~v 191 (443)
.|.. .+..++.+.+++||+|+|. +|||+|+.||... ......||.+|.|.+|+|++|+++
T Consensus 91 ~~~~----------------li~~lI~a~gveNItItG~--TIDGNG~~~g~~~--~~~g~~RP~lI~f~~ckNV~I~gV 150 (772)
T 3gqn_A 91 RGES----------------LMYNENVTTGNENIFLSSF--TLDGNNKRLGQGI--SGIGGSRESNLSIRACHNVYIRDI 150 (772)
T ss_dssp SSCC----------------SEEESCTTTCCEEEEEEEE--EEECCGGGGCSSC--CCSSTTTTCSEEEESCEEEEEEEE
T ss_pred CCCc----------------eeeeeeeccCceeEEEEee--EEeCCccccCccc--ccCCCCCccEEEEEeeceEEEEeE
Confidence 2210 1124556788999999994 9999999444311 123457899999999999999999
Q ss_pred EEecCCCceEEeeeeeeEEEEeEEEECCCCCCCCCeecccC------CccEEEEeeEEec-CCceEEEccCccccccccC
Q 013402 192 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDS------SSNVCIEDSYIST-GDDLVAVKSGWDEYGIAYG 264 (443)
Q Consensus 192 ~i~n~~~~~i~~~~~~~v~i~~~~I~~~~~~~n~DGi~~~~------s~nv~I~n~~i~~-gdD~i~i~sg~~~~g~~~~ 264 (443)
+++|++.+++. |.++.. | ||+++++ |+||+|+||+|++ +||||++++
T Consensus 151 ti~NSp~~gI~-------------I~np~~--N-DGid~DGi~fdi~S~NV~I~Nc~I~ntGDDcIAIks---------- 204 (772)
T 3gqn_A 151 EAVDCTLHGID-------------ITCGGL--D-YPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHH---------- 204 (772)
T ss_dssp EEESCSSCSEE-------------EECSSS--S-CCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECS----------
T ss_pred EEEeCCCCCEE-------------EeCCCc--C-CcCCCcCcccccccceEEEEeeEEEecCcCeEEecC----------
Confidence 99999986544 444432 2 6676666 9999999999955 999999987
Q ss_pred CCcccEEEEEEEEeCC-----CceEEEccccCCcEEEEEEEeeEEeCCceeEEEEeecCCCceEEEEEEEe-EEEcccC-
Q 013402 265 HPSSGITIRRVTGSSP-----FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSD-VYMENAR- 337 (443)
Q Consensus 265 ~~~~ni~i~n~~~~~~-----~~gi~igs~~~~~v~nI~i~n~~~~~~~~gi~i~s~~~~~g~v~nI~~~n-i~~~~~~- 337 (443)
++||+|+||+|.++ ++||+|+++ .+||+|+||++.++.+|++||++. +++.++||+|++ +.+++..
T Consensus 205 --SeNI~I~Nc~c~gphG~S~~~GIsIGsg----s~NVtV~Nc~~~nT~nGIRIKt~~-~gg~v~NV~I~gnis~~dvrs 277 (772)
T 3gqn_A 205 --SQYINILNCYSHDPRLTANCNGFEIDDG----SRHVVLSNNRSKGCYGGIEIKAHG-DAPAAYNISINGHMSVEDVRS 277 (772)
T ss_dssp --CEEEEEESCEEECCSSSSSCCSEEECTT----CEEEEEEEEEEESSSEEEEECCCT-TSCCCEEEEEEEEEEESCSEE
T ss_pred --CceEEEEeEEEECCCCCCCcccEEecCC----cccEEEEceEEECCCcEEEEEEeC-CCCccccEEEECCEEeccCeE
Confidence 79999999999655 589999954 499999999999999999999874 578899999996 7666653
Q ss_pred eeEEEEcccCCCCCCCCCCCCCCeEEeEEEEeEEEeccCe-----------eEEEE-------------ecCC-------
Q 013402 338 KGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQ-----------SGLIQ-------------GLKN------- 386 (443)
Q Consensus 338 ~~i~i~~~~~~~~~~~~~~~~~~~i~nIt~~nI~~~~~~~-----------~~~i~-------------g~~~------- 386 (443)
+.++.-+.+.. -+|... ...||+++|+....... +..+. +.+.
T Consensus 278 ynir~iG~h~a-----~dp~s~-~a~nV~l~n~~~~~P~~~~~ly~~~~praL~vsay~~v~i~~~~~igd~~y~~~~~~ 351 (772)
T 3gqn_A 278 YNFRHIGHHAA-----TAPQSV-SAKNIVASNLVSIRPNNKRGFQDNATPRVLAVSAYYGVVINGLTGYTDDPNLLTETV 351 (772)
T ss_dssp EEECCTTSCSS-----SSCCCS-SCEEEEEEEEEEESCCCSSCHHHHCCCEEEEEESCEEEEEEEEEEECSCTTSCCSEE
T ss_pred ecceEEccccC-----CCCCCc-cCccEEeecceEEcccccCceeeCCCcceEEEEcCCCcEecCceeccCcccccCCce
Confidence 45443333211 012222 57999999998765421 22222 2222
Q ss_pred ----CCeeeEEEEeEEEEeeCCC
Q 013402 387 ----SPFTGICLSNINLQGVAGP 405 (443)
Q Consensus 387 ----~~i~ni~~~nv~~~~~~~~ 405 (443)
-.++|++|.||.++.-...
T Consensus 352 i~~q~~~~~~~ln~i~i~gf~~a 374 (772)
T 3gqn_A 352 VSVQFRARNCSLNGVVLTGFSNS 374 (772)
T ss_dssp EEEETTCEEEEEEEEEEESCTTC
T ss_pred EEEEEecceeEEcceEEecccCC
Confidence 1478999999999886543
No 17
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=100.00 E-value=4.4e-35 Score=282.09 Aligned_cols=228 Identities=20% Similarity=0.227 Sum_probs=184.6
Q ss_pred CceEEEeeccccCCCcchhHHHHHHHHHHhhhhccCCCeEEEECCC----ceEEE-EeEeccccEEEEccCcEEEecCCC
Q 013402 36 NDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPG----VYLTG-SFNLTSHMTLYLAKGAVIKATQDT 110 (443)
Q Consensus 36 ~~~~nV~dyGa~gDg~tddt~aiq~Ai~~~~~~~~~gg~~V~ip~G----~Y~~~-~l~l~s~~tl~~~~ga~l~~~~~~ 110 (443)
++.+||+||||+|||++|||+|||+||++|+ +..+|++|+||+| +|+++ +|.|+|+++|+++.+++++++...
T Consensus 49 s~~~NVkDFGAkGDGvTDDTaAIQkAIdaA~--a~~GGGtVyVPaG~~~~tYlvt~tI~LkSnV~L~Ge~~AtIl~s~~~ 126 (514)
T 2vbk_A 49 KEAISILDFGVIDDGVTDNYQAIQNAIDAVA--SLPSGGELFIPASNQAVGYIVGSTLLIPGGVNIRGVGKASQLRAKSG 126 (514)
T ss_dssp TTCCBGGGGCCCCSSSSCCHHHHHHHHHHHH--TSTTCEEEECCCCSSTTCEEESSCEEECTTEEEECCSTTSEEEECTT
T ss_pred CcEEEeeccCcCCCCCcccHHHHHHHHHHHh--hcCCCeEEEECCCCcceeEEECCeEEecCCeEEEEecCceEeecccc
Confidence 5689999999999999999999999999986 1237899999999 99996 899999999999999988765321
Q ss_pred CCCCCcCCCCCCCcccccCCCcceeeEEecCeeeeEEeccCcEEeCCCchhhhhhccCCCCCCCCeeEEEEeecceEEEe
Q 013402 111 WNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISN 190 (443)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~G~~G~idG~G~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~~ 190 (443)
. .|. +....|.+++.+.+++|++|+|. |+|||++..|+.... ..+++..+ .++++.|++
T Consensus 127 ----I--------~Gt-Iia~~y~s~I~~~~VeNIaITG~-GTIDG~g~n~t~e~~----~~Rq~~~~---~fdnV~Vn~ 185 (514)
T 2vbk_A 127 ----L--------TGS-VLRLSYDSDTIGRYLRNIRVTGN-NTCNGIDTNITAEDS----VIRQVYGW---VFDNVMVNE 185 (514)
T ss_dssp ----C--------CSE-EEEECCCSCCSCEEEESCEEECC-SSSEEEEESCCTTCS----SCCCEESE---EEESCEEEE
T ss_pred ----c--------ccc-EEeccCCccccccCceEEEEECC-CeEeCCCCCccccce----eeeccceE---EeeeEEEEe
Confidence 0 010 00112445667788999999998 999998766532100 11222223 367999999
Q ss_pred EEE--ecCCCceEEeeeeeeEEEE-eEEEECCCCCCCCCeecccCCccEEEEeeEEecCCceEEEccCccccccccCCCc
Q 013402 191 VIF--QNSPFWNIHPVYCSNVVIR-YVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPS 267 (443)
Q Consensus 191 v~i--~n~~~~~i~~~~~~~v~i~-~~~I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~sg~~~~g~~~~~~~ 267 (443)
++. .+++.|++++..|++++++ ++++. .+|+||+|.||+|..|||||++|+|.-..+..+.+|+
T Consensus 186 Vt~~v~~Sg~WTIhPi~Cqnvt~r~gL~f~-------------eSCrNV~IsnC~FsVGDdciaiksGk~~~~~~~~~~s 252 (514)
T 2vbk_A 186 VETAYLMQGLWHSKFIACQAGTCRVGLHFL-------------GQCVSVSVSSCHFSRGNYSADESFGIRIQPQTYAWSS 252 (514)
T ss_dssp EEEEEEEESEEEEEEESCEEEEEEEEEEEE-------------SCCEEEEEESCEEECTTSCCTTCEEEEEECBCCTTTS
T ss_pred EEEeEeccCcEEEeEeccCceecccCcccc-------------CCCCeEEEeccEEecCcceeeeecCceecccccCCcc
Confidence 964 5788999999999999988 66664 2899999999999999999999999888888889999
Q ss_pred ccEEEEEEEEeCCCceEEEccc-cCCcEEE-EEEEeeEEeCCc
Q 013402 268 SGITIRRVTGSSPFSGIAVGSE-TSGGVEN-VLAEHINLYNVG 308 (443)
Q Consensus 268 ~ni~i~n~~~~~~~~gi~igs~-~~~~v~n-I~i~n~~~~~~~ 308 (443)
+|+. +.++.|||| +.++++| |++++|.+.+++
T Consensus 253 e~~~---------hgav~igSE~m~~Gvk~~v~v~~Clf~~td 286 (514)
T 2vbk_A 253 EAVR---------SEAIILDSETMCIGFKNAVYVHDCLDLHME 286 (514)
T ss_dssp SCBC---------CEEEEEESSEEEESCSEEEEESCCEEEEEE
T ss_pred hhcc---------cccEEECchhhcccccccEEEEeeeccCCc
Confidence 9998 789999999 8889999 999999998763
No 18
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=100.00 E-value=4.9e-31 Score=263.51 Aligned_cols=256 Identities=22% Similarity=0.320 Sum_probs=173.7
Q ss_pred eEEEeeccccCCCcchhHHHHHHHHHHhhhhccCCCeEEEECCCceEE--------EEeEeccccEEEEc-cC-cEEEec
Q 013402 38 KISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLT--------GSFNLTSHMTLYLA-KG-AVIKAT 107 (443)
Q Consensus 38 ~~nV~dyGa~gDg~tddt~aiq~Ai~~~~~~~~~gg~~V~ip~G~Y~~--------~~l~l~s~~tl~~~-~g-a~l~~~ 107 (443)
+++|++|||+|||.+|||+|||+||++|. +.+|++|+||||+|++ ++|.|+|+++|+++ ++ ++|++.
T Consensus 2 ~~~v~~~ga~~dg~~ddt~aiq~Ai~~a~---~~gg~~v~~p~G~y~~~~~~~~~~g~l~~~~~v~l~g~g~~~t~l~~~ 78 (377)
T 2pyg_A 2 DYNVKDFGALGDGVSDDRASIQAAIDAAY---AAGGGTVYLPAGEYRVSAAGEPGDGCLMLKDGVYLAGAGMGETVIKLI 78 (377)
T ss_dssp CEEGGGGTCCCEEEEECHHHHHHHHHHHH---HTTSEEEEECSEEEEECCCSSGGGCSEECCTTEEEEESSBTTEEEEEC
T ss_pred EeeeeecCCCCCCCcchHHHHHHHHHHHH---hcCCCEEEECCeEEEEcccccCCcccEEecCCeEEEEcCCCCcEEEec
Confidence 58999999999999999999999999996 4679999999999998 48999999999998 45 455666
Q ss_pred CCCCCCCCcCCCCCCCcccccCCCcceeeEEecCeeeeEEeccC----cEEeCCCchhhhhhccCCCCCCCCeeEEEEee
Q 013402 108 QDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGEN----GTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNS 183 (443)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~G~~----G~idG~G~~~~~~~~~~~~~~~~~~~i~~~~~ 183 (443)
.+...++.......++.. . ...++++++|.|.. |+++| ||...... .+..|
T Consensus 79 ~~~~~~~~~~~~~~~g~~-------~----~~~~~~~~~I~G~~~~~~G~idG----w~~~~~~~----------~~~~~ 133 (377)
T 2pyg_A 79 DGSDQKITGMVRSAYGEE-------T----SNFGMRDLTLDGNRDNTSGKVDG----WFNGYIPG----------GDGAD 133 (377)
T ss_dssp TTCBSCEEEEEECCTTSC-------C----EEEEEEEEEEECCGGGCBSCEEE----EEECSCTT----------SSCCE
T ss_pred CCCccCccceEeccCCCc-------c----eEEEEEEEEEECCCccCCccccc----eecccCcc----------ccccc
Confidence 554333210000011110 0 12467899999951 67876 88642111 12469
Q ss_pred cceEEEeEEEecCCCceEEeeeee-eEEEEeEEEECCCCCCCCCeecccCCccEEEEeeE-EecCCceEEEccCcccccc
Q 013402 184 RSIIISNVIFQNSPFWNIHPVYCS-NVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSY-ISTGDDLVAVKSGWDEYGI 261 (443)
Q Consensus 184 ~nv~I~~v~i~n~~~~~i~~~~~~-~v~i~~~~I~~~~~~~n~DGi~~~~s~nv~I~n~~-i~~gdD~i~i~sg~~~~g~ 261 (443)
++++|+++++++++.|++++..|. ++.++|+.+... ..|||.+..|++++|++|+ +...+|||.+..+
T Consensus 134 ~nv~I~~~~i~n~~~~gi~~~~~~~~~~i~n~~~~~~----~~dGI~~~~s~~~~i~~N~~~~~~~~GI~~~~~------ 203 (377)
T 2pyg_A 134 RDVTIERVEVREMSGYGFDPHEQTINLTIRDSVAHDN----GLDGFVADYLVDSVFENNVAYANDRHGFNVVTS------ 203 (377)
T ss_dssp EEEEEEEEEEECCSSCSEEECSSEEEEEEESCEEESC----SSCSEEEESEEEEEEESCEEESCSSCSEEEETT------
T ss_pred cceEEEeEEEEecccceEEeecccCCeEEEeEEeecC----CCCceeEeccCCcEEECcEEEccccCcEEEEec------
Confidence 999999999999999999998875 688888887643 3677777777777777774 3346666666543
Q ss_pred ccCCCcccEEEEEEEEeCCCceEEE---ccccCCcEEEEEEEeeEEeCC-ceeEEEEeecCCCceEEEEEEEeEEEccc-
Q 013402 262 AYGHPSSGITIRRVTGSSPFSGIAV---GSETSGGVENVLAEHINLYNV-GVGIHVKTNIGRGGFIRNITVSDVYMENA- 336 (443)
Q Consensus 262 ~~~~~~~ni~i~n~~~~~~~~gi~i---gs~~~~~v~nI~i~n~~~~~~-~~gi~i~s~~~~~g~v~nI~~~ni~~~~~- 336 (443)
+++++|+||++.+.+.|+.+ +++.....++++|+++++.+. .+|+.+.. +++++++|+++.+.
T Consensus 204 -----s~~v~I~nN~i~~~~~g~~~~~~g~~~~~~s~nv~i~~N~~~~n~~~Gi~~~~-------~~~v~i~~N~i~~~~ 271 (377)
T 2pyg_A 204 -----THDFVMTNNVAYGNGSSGLVVQRGLEDLALPSNILIDGGAYYDNAREGVLLKM-------TSDITLQNADIHGNG 271 (377)
T ss_dssp -----CEEEEEESCEEESCSSCSEEEECCSSCCCCCEEEEEESCEEESCSSCSEEEEE-------EEEEEEESCEEESCS
T ss_pred -----cCCeEEECCEEECccCceEEEeccccCCCCCccEEEECCEEEcCccCceEecc-------ccCeEEECCEEECCC
Confidence 56677777776665555554 333333455666666666552 35555533 35666666666655
Q ss_pred CeeEEEE
Q 013402 337 RKGIKIA 343 (443)
Q Consensus 337 ~~~i~i~ 343 (443)
..+|++.
T Consensus 272 ~~GI~i~ 278 (377)
T 2pyg_A 272 SSGVRVY 278 (377)
T ss_dssp SCSEEEE
T ss_pred CceEEEe
Confidence 4555554
No 19
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=99.92 E-value=1.5e-23 Score=211.50 Aligned_cols=227 Identities=18% Similarity=0.219 Sum_probs=184.0
Q ss_pred eeeEEecCeeeeEEeccCcEEeCCCchhhhhhccCCCCCCCCeeEEEEeecceEEEeEEEecC--CCceEEeeeeeeEEE
Q 013402 134 MSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNS--PFWNIHPVYCSNVVI 211 (443)
Q Consensus 134 ~~~i~~~~~~nv~I~G~~G~idG~G~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i~n~--~~~~i~~~~~~~v~i 211 (443)
..++.+.+++|++|.|. ++.-. +.| .+++..|+|++|+++++.++ ..+++++..|++|+|
T Consensus 190 P~~i~~~~~~nv~i~gi--ti~ns--p~~--------------~i~~~~~~nv~i~~v~I~~~~~NtDGidi~~s~nV~I 251 (448)
T 3jur_A 190 PSFVQFYRCRNVLVEGV--KIINS--PMW--------------CIHPVLSENVIIRNIEISSTGPNNDGIDPESCKYMLI 251 (448)
T ss_dssp CCSEEEESCEEEEEESC--EEESC--SSC--------------SEEEESCEEEEEESCEEEECSTTCCSBCCBSCEEEEE
T ss_pred ceEEEEEcccceEEEee--EEEeC--CCc--------------eEeeeccCCEEEEeEEEeeccCCCccccccCCcCEEE
Confidence 45889999999999997 44311 223 49999999999999999985 457899999999999
Q ss_pred EeEEEECCCCCCCCCeecccC------------CccEEEEeeEEe--cCCceEEEccCccccccccCCCcccEEEEEEEE
Q 013402 212 RYVTILAPADSPNTDGIDPDS------------SSNVCIEDSYIS--TGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTG 277 (443)
Q Consensus 212 ~~~~I~~~~~~~n~DGi~~~~------------s~nv~I~n~~i~--~gdD~i~i~sg~~~~g~~~~~~~~ni~i~n~~~ 277 (443)
+|++|.+. .|+|.+.+ |+||+|+||+++ .+++||+++|+. ....+||+|+||++
T Consensus 252 ~n~~i~~g-----DDcIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~~-------~~~v~nV~v~n~~~ 319 (448)
T 3jur_A 252 EKCRFDTG-----DDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEM-------SGGVRNVVARNNVY 319 (448)
T ss_dssp ESCEEEES-----SEEEEEBCCCHHHHHHHCCCEEEEEEESCEEECSSCSEEEEECSSC-------TTCEEEEEEESCEE
T ss_pred EeeEEEeC-----CCcEEeccCccccccccCCCceeEEEEEeEEecCCCcceEEECCcc-------cCcEEEEEEEEEEE
Confidence 99999984 45665543 789999999994 466799998862 23489999999999
Q ss_pred eCCCceEEEccc--cCCcEEEEEEEeeEEeCCceeE-EEEeecC-----CCceEEEEEEEeEEEcccCeeEEEEcccCCC
Q 013402 278 SSPFSGIAVGSE--TSGGVENVLAEHINLYNVGVGI-HVKTNIG-----RGGFIRNITVSDVYMENARKGIKIAGDVGDH 349 (443)
Q Consensus 278 ~~~~~gi~igs~--~~~~v~nI~i~n~~~~~~~~gi-~i~s~~~-----~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~ 349 (443)
.+..+|++|++. ..+.++||+|+|++|.+...++ .|..... ..+.|+||+|+||+.++...++.|...
T Consensus 320 ~~t~~GirIKt~~g~gG~v~nI~f~ni~m~~v~~~~i~I~~~Y~~~~~~~~~~i~nI~~~NI~~t~~~~~i~i~g~---- 395 (448)
T 3jur_A 320 MNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRYDNEEGEYLPVVRSVFVKNLKATGGKYAVRIEGL---- 395 (448)
T ss_dssp ESCSEEEEEECCTTTCSEEEEEEEESCEEEEESSEEEEEESCGGGCCCSCCCEEEEEEEESCEEEECSEEEEEECB----
T ss_pred ecccceEEEEEEcCCCceEeeEEEEEEEEECCccccEEEEeeccCCCCCCCceEEEEEEEeEEEEecceEEEEEeC----
Confidence 988999999985 3467999999999999988887 8876432 246899999999999998888888642
Q ss_pred CCCCCCCCCCCeEEeEEEEeEEEeccCeeEEEEe----cCCCCeeeEEEEeEEEEee
Q 013402 350 PDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQG----LKNSPFTGICLSNINLQGV 402 (443)
Q Consensus 350 ~~~~~~~~~~~~i~nIt~~nI~~~~~~~~~~i~g----~~~~~i~ni~~~nv~~~~~ 402 (443)
++ ..++||+|+||+++....+..+.. .....++|++|+||++.+.
T Consensus 396 ------~~--~p~~~I~~~nv~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~ing~ 444 (448)
T 3jur_A 396 ------EN--DYVKDILISDTIIEGAKISVLLEFGQLGMENVIMNGSRFEKLYIEGK 444 (448)
T ss_dssp ------TT--BCEEEEEEEEEEEESCSEEEEEEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred ------CC--CCEeeEEEEEEEEEccccceeEeccccccccceecccEEEEEEEcCE
Confidence 22 269999999999998877666653 3445699999999999874
No 20
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=99.91 E-value=2.6e-23 Score=215.46 Aligned_cols=245 Identities=16% Similarity=0.172 Sum_probs=181.9
Q ss_pred CCceEEEeeccccCCCcchhHHHHHHHHHHhhhhcc------CCCeEEEECCCceEEE-EeEeccccEEEEccC--cEEE
Q 013402 35 RNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRR------SGGTLLYVPPGVYLTG-SFNLTSHMTLYLAKG--AVIK 105 (443)
Q Consensus 35 ~~~~~nV~dyGa~gDg~tddt~aiq~Ai~~~~~~~~------~gg~~V~ip~G~Y~~~-~l~l~s~~tl~~~~g--a~l~ 105 (443)
-+-.+||+||||+|||++|||+|||+||++|.+|.. ..+++|+||+|+|+++ +|.|++++.|.++.. .+|+
T Consensus 46 y~v~~nV~dfGA~GDG~tDDT~Aiq~Ai~~a~~~Gggc~~st~~~~~V~~P~GtYlvs~tI~l~~~t~L~G~~~~~pvIk 125 (758)
T 3eqn_A 46 YPVFRNVKNYGAKGDGNTDDTAAIQAAINAGGRCGQGCDSTTTQPALVYFPPGTYKVSSPLVVLYQTQLIGDAKNLPTLL 125 (758)
T ss_dssp CCSEEEGGGGTCCCEEEEECHHHHHHHHHTTSCSCTTCCCCSSSCEEEEECSSEEEESSCEECCTTEEEEECSSSCCEEE
T ss_pred CeEEEEHHHcCcCCCCCchhHHHHHHHHHHhhhcccccccccccceEEEECCceEEEcccEEccCCeEEEecCCCCCeEe
Confidence 344669999999999999999999999999863210 1126999999999987 899999999999876 4777
Q ss_pred ecCCCCCCCCcCCCCCCCcccccCCCcceeeEEecCeeeeEEeccCcEEeCCCchhhhhhccCCCCCCCCeeEEEEeecc
Q 013402 106 ATQDTWNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRS 185 (443)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~G~~G~idG~G~~~~~~~~~~~~~~~~~~~i~~~~~~n 185 (443)
+...... ..+ |.+ ...+++|..||.. ....+..++|
T Consensus 126 a~~~F~G---------------------~~l----------i~~--d~y~~~G~~w~~~-----------~~~F~r~irN 161 (758)
T 3eqn_A 126 AAPNFSG---------------------IAL----------IDA--DPYLAGGAQYYVN-----------QNNFFRSVRN 161 (758)
T ss_dssp ECTTCCS---------------------SCS----------EES--SCBCGGGCBSSCG-----------GGCCCEEEEE
T ss_pred cCCCCCC---------------------cce----------eec--cccCCCCcccccc-----------ccceeeeecc
Confidence 6543211 011 233 2344567778742 2234556777
Q ss_pred eEEEeEEEecCCCceEEeeeeeeEEEEeEEEECCCCC-CCCCeecccCCccEEEEeeEEecCCceEEEccCccccccccC
Q 013402 186 IIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS-PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYG 264 (443)
Q Consensus 186 v~I~~v~i~n~~~~~i~~~~~~~v~i~~~~I~~~~~~-~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~sg~~~~g~~~~ 264 (443)
+.|+ ++-.++...+|++..|++..|+||.|..+..+ ...+||+++.+....|+|++|..|+=|+.+.
T Consensus 162 lviD-~t~~~~~~~gIhw~vaQatsL~Nv~i~m~~~sg~~~~GI~~e~GSgg~i~Dl~f~GG~~G~~~g----------- 229 (758)
T 3eqn_A 162 FVID-LRQVSGSATGIHWQVSQATSLINIVFQMSTAAGNQHQGIFMENGSGGFLGDLVFNGGNIGATFG----------- 229 (758)
T ss_dssp EEEE-CTTCSSCEEEEECCCCSSEEEEEEEEECCCSTTCCEEEEEECSCCCCEEEEEEEESCSEEEEEE-----------
T ss_pred eEEe-ccccCCCceEEEEEecCceEEEEEEEEecCCCCCcceeEEecCCCceEEEeeEEeCCceEEEcC-----------
Confidence 7777 55556667899999999999999999997654 3489999999899999999999998777764
Q ss_pred CCcccEEEEEEEEeCCCceEEEccccCCcEEEEEEEeeEEeCCceeEEEEeecC---CCceEEEEEEEeEEEcccCeeEE
Q 013402 265 HPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIG---RGGFIRNITVSDVYMENARKGIK 341 (443)
Q Consensus 265 ~~~~ni~i~n~~~~~~~~gi~igs~~~~~v~nI~i~n~~~~~~~~gi~i~s~~~---~~g~v~nI~~~ni~~~~~~~~i~ 341 (443)
.+..+++|.+|.+...+|.+.-.- ..++++++|.++..||.|..... ..-.+.-|++.|.+++++..++.
T Consensus 230 --nQQfT~rnltF~~~~taI~~~w~w-----gwt~~~~~i~nc~vGi~~~~g~~~~~~~q~vGsv~l~Ds~~~n~~~~i~ 302 (758)
T 3eqn_A 230 --NQQFTVRNLTFNNANTAINAIWNW-----GWTFQRITINNCQVGFDLTQGGTSNTGAQGVGAEAIIDAVVTNTQTFVR 302 (758)
T ss_dssp --CSCCEEEEEEEESCSEEEEEEEBS-----CEEEEEEEEESCSEEEEECCCCSSTTSCCCBCEEEEEEEEEESCSEEEE
T ss_pred --CcceEEeccEEeChHHHHhhhcCc-----eEEEEEeEEECCCccEEEcCCCCCcccCcceeeEEEEEeeEEcccceEE
Confidence 367788888888877777765322 35777777777778988865321 12247788999999999887664
Q ss_pred E
Q 013402 342 I 342 (443)
Q Consensus 342 i 342 (443)
.
T Consensus 303 t 303 (758)
T 3eqn_A 303 W 303 (758)
T ss_dssp E
T ss_pred e
Confidence 4
No 21
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.90 E-value=2.9e-22 Score=197.30 Aligned_cols=194 Identities=16% Similarity=0.181 Sum_probs=157.8
Q ss_pred eeEEEEeecceEEEe---EEEecCC--Cc------------eEEeeeeeeEEEEeEEEECCCCCCCCCeecccCCccEEE
Q 013402 176 NLIEFMNSRSIIISN---VIFQNSP--FW------------NIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCI 238 (443)
Q Consensus 176 ~~i~~~~~~nv~I~~---v~i~n~~--~~------------~i~~~~~~~v~i~~~~I~~~~~~~n~DGi~~~~s~nv~I 238 (443)
.+|.+ +.+|++|.| -+|...+ .| .+.+..|++++|+++++.+++ ..+|++. |+||+|
T Consensus 88 ~~i~~-~~~nv~I~G~~~g~IdG~G~~~w~~~~~~~~~rP~~i~~~~~~nv~i~~iti~nsp----~~~i~i~-~~nv~i 161 (362)
T 1czf_A 88 PLISM-SGEHITVTGASGHLINCDGARWWDGKGTSGKKKPKFFYAHGLDSSSITGLNIKNTP----LMAFSVQ-ANDITF 161 (362)
T ss_dssp CSEEE-EEESCEEEECTTCEEECCGGGTCCSCTTSSSCCCCCEEEEEEETEEEESCEEECCS----SCCEEEE-CSSEEE
T ss_pred cEEEE-eCccEEEEcCCCcEEECCCchhhcccCCCCCCCCeEEEEeecccEEEEEEEEecCC----ccEEEEe-eCCEEE
Confidence 35666 559999999 4554332 23 388999999999999999975 3569999 999999
Q ss_pred EeeEEec-CC--------ceEEEccCccccccccCCCcccEEEEEEEEeCCCceEEEccccCCcEEEEEEEeeEEeCCce
Q 013402 239 EDSYIST-GD--------DLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGV 309 (443)
Q Consensus 239 ~n~~i~~-gd--------D~i~i~sg~~~~g~~~~~~~~ni~i~n~~~~~~~~gi~igs~~~~~v~nI~i~n~~~~~~~~ 309 (443)
+|++|.+ .+ |||.+.+ ++||+|+||++..++++|+|++. +||+|+||++.+. +
T Consensus 162 ~~~~I~~~~~d~~~~~NtDGidi~~------------s~nV~I~n~~i~~gDDcIaiksg-----~nI~i~n~~~~~g-h 223 (362)
T 1czf_A 162 TDVTINNADGDTQGGHNTDAFDVGN------------SVGVNIIKPWVHNQDDCLAVNSG-----ENIWFTGGTCIGG-H 223 (362)
T ss_dssp ESCEEECGGGGTTTCCSCCSEEECS------------CEEEEEESCEEECSSCSEEESSE-----EEEEEESCEEESS-C
T ss_pred EEEEEECCccccccCCCCCceeecC------------cceEEEEeeEEecCCCEEEEeCC-----eEEEEEEEEEeCC-c
Confidence 9999997 23 4555543 89999999999999999999984 8999999999986 7
Q ss_pred eEEEEeecC-CCceEEEEEEEeEEEcccCeeEEEEcccCCCCCCCCCCCCCCeEEeEEEEeEEEeccC-eeEEEEec---
Q 013402 310 GIHVKTNIG-RGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQ-QSGLIQGL--- 384 (443)
Q Consensus 310 gi~i~s~~~-~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nIt~~nI~~~~~~-~~~~i~g~--- 384 (443)
|+.|+|... ..+.|+||+|+|+++.+..++++|+.+.+ +.+.++||+|+||++.+.. .|+.|...
T Consensus 224 GisiGS~G~~~~~~v~nV~v~n~~~~~t~~GirIKt~~g----------~~G~v~nI~~~ni~~~~v~~~~i~I~~~Y~~ 293 (362)
T 1czf_A 224 GLSIGSVGDRSNNVVKNVTIEHSTVSNSENAVRIKTISG----------ATGSVSEITYSNIVMSGISDYGVVIQQDYED 293 (362)
T ss_dssp CEEEEEECSSSCCEEEEEEEEEEEEEEEEEEEEEEEETT----------CCEEEEEEEEEEEEEEEEEEEEEEEEEEEET
T ss_pred eeEEeeccccCCCCEEEEEEEeeEEECCceEEEEEEeCC----------CCceEeeEEEEeEEEECcccccEEEEEecCC
Confidence 999999622 45889999999999999999999996421 2358999999999999875 57776421
Q ss_pred ------C--CCCeeeEEEEeEEEEeeC
Q 013402 385 ------K--NSPFTGICLSNINLQGVA 403 (443)
Q Consensus 385 ------~--~~~i~ni~~~nv~~~~~~ 403 (443)
+ ..+++||+|+||+.+.+.
T Consensus 294 ~~~~~~p~~~~~i~nI~~~ni~gt~~~ 320 (362)
T 1czf_A 294 GKPTGKPTNGVTIQDVKLESVTGSVDS 320 (362)
T ss_dssp TEECSCCCSSEEEEEEEEEEEEEEECT
T ss_pred CCCCCCCCCCceEEEEEEEEEEEEecC
Confidence 1 236999999999998865
No 22
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=99.90 E-value=6.7e-22 Score=193.44 Aligned_cols=195 Identities=21% Similarity=0.256 Sum_probs=161.1
Q ss_pred eeEEEEeecceEEEeE---EEecCC--Cc-------------eEEeeeeeeEEEEeEEEECCCCCCCCCeecccCCccEE
Q 013402 176 NLIEFMNSRSIIISNV---IFQNSP--FW-------------NIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVC 237 (443)
Q Consensus 176 ~~i~~~~~~nv~I~~v---~i~n~~--~~-------------~i~~~~~~~v~i~~~~I~~~~~~~n~DGi~~~~s~nv~ 237 (443)
.+|.+.. +|++|.|. +|...+ .| .+.+..|++++|+++++.+++ .++|++..|++|+
T Consensus 65 ~li~~~~-~nv~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp----~~~i~i~~~~nv~ 139 (339)
T 1ia5_A 65 PLISVSG-SDLTITGASGHSINGDGSRWWDGEGGNGGKTKPKFFAAHSLTNSVISGLKIVNSP----VQVFSVAGSDYLT 139 (339)
T ss_dssp CSEEEEE-ESCEEEECTTCEEECCGGGTCSSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCS----SCCEEEESCEEEE
T ss_pred cEEEEEc-CcEEEEcCCCeEEeCCCCccccccccCCCCCCCeEEEEeecCcEEEEEEEEEcCC----cceEEEecccCeE
Confidence 3566654 99999997 665432 23 488899999999999999975 5789999999999
Q ss_pred EEeeEEecC---------CceEEEccCccccccccCCCcccEEEEEEEEeCCCceEEEccccCCcEEEEEEEeeEEeCCc
Q 013402 238 IEDSYISTG---------DDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVG 308 (443)
Q Consensus 238 I~n~~i~~g---------dD~i~i~sg~~~~g~~~~~~~~ni~i~n~~~~~~~~gi~igs~~~~~v~nI~i~n~~~~~~~ 308 (443)
|+|++|.+. .|||.+.+ ++||+|+||++...+++|++++. +||+|+||++.+.
T Consensus 140 i~~~~I~~~~~d~~~~~ntDGid~~~------------s~nV~I~n~~i~~gDDcIaiksg-----~nI~i~n~~~~~g- 201 (339)
T 1ia5_A 140 LKDITIDNSDGDDNGGHNTDAFDIGT------------STYVTISGATVYNQDDCVAVNSG-----ENIYFSGGYCSGG- 201 (339)
T ss_dssp EESCEEECGGGTTTTCCSCCSEEEES------------CEEEEEESCEEECSSCSEEESSE-----EEEEEESCEEESS-
T ss_pred EeeEEEECCccccccCCCCCcEEecC------------CceEEEEeeEEEcCCCeEEEeCC-----eEEEEEeEEEECC-
Confidence 999999862 46677765 89999999999998999999973 8999999999986
Q ss_pred eeEEEEeecC-CCceEEEEEEEeEEEcccCeeEEEEcccCCCCCCCCCCCCCCeEEeEEEEeEEEeccCe-eEEEEec--
Q 013402 309 VGIHVKTNIG-RGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQ-SGLIQGL-- 384 (443)
Q Consensus 309 ~gi~i~s~~~-~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nIt~~nI~~~~~~~-~~~i~g~-- 384 (443)
+|+.|+|... ..+.|+||+|+|+++.+..++++|+.+.+ +.+.++||+|+||++.+... |+.|...
T Consensus 202 hGisiGS~g~~~~~~v~nV~v~n~~~~~t~~girIKt~~g----------~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~ 271 (339)
T 1ia5_A 202 HGLSIGSVGGRSDNTVKNVTFVDSTIINSDNGVRIKTNID----------TTGSVSDVTYKDITLTSIAKYGIVVQQNYG 271 (339)
T ss_dssp SCEEEEEECSSSCCEEEEEEEEEEEEESCSEEEEEEEETT----------CCCEEEEEEEEEEEEEEESSEEEEEEEEET
T ss_pred ceEEECcCCcccCCCEEEEEEEeeEEECCCcEEEEEEeCC----------CCcEEEeeEEEEEEEECcccccEEEEccCC
Confidence 7999998632 34789999999999999999999996421 23589999999999998764 8777531
Q ss_pred -----C--CCCeeeEEEEeEEEEeeC
Q 013402 385 -----K--NSPFTGICLSNINLQGVA 403 (443)
Q Consensus 385 -----~--~~~i~ni~~~nv~~~~~~ 403 (443)
+ ..+++||+|+||+.+...
T Consensus 272 ~~~~~p~~~~~i~ni~~~ni~gt~~~ 297 (339)
T 1ia5_A 272 DTSSTPTTGVPITDFVLDNVHGSVVS 297 (339)
T ss_dssp CTTSCCCSSSCEEEEEEEEEEEEECT
T ss_pred CCCCCCcCCceEEEEEEEeEEEEeCC
Confidence 2 247999999999998865
No 23
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=99.90 E-value=1.5e-21 Score=190.97 Aligned_cols=195 Identities=20% Similarity=0.269 Sum_probs=160.6
Q ss_pred eeEEEEeecceEEEeE---EEecCC--Cc-------------eEEeeeeeeEEEEeEEEECCCCCCCCCeecccCCccEE
Q 013402 176 NLIEFMNSRSIIISNV---IFQNSP--FW-------------NIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVC 237 (443)
Q Consensus 176 ~~i~~~~~~nv~I~~v---~i~n~~--~~-------------~i~~~~~~~v~i~~~~I~~~~~~~n~DGi~~~~s~nv~ 237 (443)
.++.+.. +|++|.|. +|...+ .| .+.+..|++++|+++++.+++ .++|++..|++|+
T Consensus 61 ~~i~~~~-~nv~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~giti~nsp----~~~i~i~~~~nv~ 135 (339)
T 2iq7_A 61 PLISFSG-TNININGASGHSIDCQGSRWWDSKGSNGGKTKPKFFYAHSLKSSNIKGLNVLNTP----VQAFSINSATTLG 135 (339)
T ss_dssp CSEEEEE-ESCEEEECTTCEEECCGGGTCCSCGGGSSSCCCCCEEEEEEEEEEEECCEEECCS----SCCEEEESCEEEE
T ss_pred cEEEEEc-ccEEEEcCCCCEEECCcccccccccccCCCCCCeEEEEeeeCcEEEEEEEEEeCC----cceEEEeccCCEE
Confidence 3566655 99999997 665432 23 488899999999999999965 4789999999999
Q ss_pred EEeeEEecC---------CceEEEccCccccccccCCCcccEEEEEEEEeCCCceEEEccccCCcEEEEEEEeeEEeCCc
Q 013402 238 IEDSYISTG---------DDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVG 308 (443)
Q Consensus 238 I~n~~i~~g---------dD~i~i~sg~~~~g~~~~~~~~ni~i~n~~~~~~~~gi~igs~~~~~v~nI~i~n~~~~~~~ 308 (443)
|+|++|.+. .|||.+.+ ++||+|+||++...+++|+|++. +||+|+||++.+.
T Consensus 136 i~~~~I~~~~~d~~~~~ntDGid~~~------------s~nV~I~n~~i~~gDDciaiksg-----~nI~i~n~~~~~g- 197 (339)
T 2iq7_A 136 VYDVIIDNSAGDSAGGHNTDAFDVGS------------STGVYISGANVKNQDDCLAINSG-----TNITFTGGTCSGG- 197 (339)
T ss_dssp EESCEEECGGGGGTTCCSCCSEEEES------------CEEEEEESCEEECSSCSEEESSE-----EEEEEESCEEESS-
T ss_pred EEEEEEECCccccccCCCCCcEEEcC------------cceEEEEecEEecCCCEEEEcCC-----ccEEEEeEEEECC-
Confidence 999999872 45677665 89999999999988999999973 8999999999986
Q ss_pred eeEEEEeecC-CCceEEEEEEEeEEEcccCeeEEEEcccCCCCCCCCCCCCCCeEEeEEEEeEEEeccCe-eEEEEe---
Q 013402 309 VGIHVKTNIG-RGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQ-SGLIQG--- 383 (443)
Q Consensus 309 ~gi~i~s~~~-~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nIt~~nI~~~~~~~-~~~i~g--- 383 (443)
+|+.|+|... ..+.++||+|+|+++.+..++++|+.+.+ +.+.++||+|+||++.+... |+.|..
T Consensus 198 hGisiGSlg~~~~~~v~nV~v~n~~~~~~~~girIkt~~g----------~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~ 267 (339)
T 2iq7_A 198 HGLSIGSVGGRSDNTVKTVTISNSKIVNSDNGVRIKTVSG----------ATGSVSGVTYSGITLSNIAKYGIVIEQDYE 267 (339)
T ss_dssp CCEEEEEESSSSCCEEEEEEEEEEEEESCSEEEEEEEETT----------CCCEEEEEEEEEEEEEEESSEEEEEEEEEE
T ss_pred ceEEECcCCcccCCCEEEEEEEeeEEECCCcEEEEEEeCC----------CCeEEEEEEEEeEEccCcccccEEEEeecC
Confidence 7999999632 34789999999999999999999996421 23589999999999998764 777642
Q ss_pred c------C--CCCeeeEEEEeEEEEeeC
Q 013402 384 L------K--NSPFTGICLSNINLQGVA 403 (443)
Q Consensus 384 ~------~--~~~i~ni~~~nv~~~~~~ 403 (443)
. + ..+++||+|+||+.+...
T Consensus 268 ~~~~~~~p~~~~~i~ni~~~ni~gt~~~ 295 (339)
T 2iq7_A 268 NGSPTGTPTNGVPITGLTLSKITGSVAS 295 (339)
T ss_dssp TTEECSCCCSSSCEEEEEEEEEEEEECT
T ss_pred CCCCCCCCCCCceEEEEEEEeEEEEeCC
Confidence 1 2 247999999999999876
No 24
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.89 E-value=2.1e-21 Score=189.73 Aligned_cols=193 Identities=18% Similarity=0.236 Sum_probs=158.7
Q ss_pred eEEEEeecceEEEeE---EEecCC--Cc-------------eEEeeeeeeEEEEeEEEECCCCCCCCCeecccCCccEEE
Q 013402 177 LIEFMNSRSIIISNV---IFQNSP--FW-------------NIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCI 238 (443)
Q Consensus 177 ~i~~~~~~nv~I~~v---~i~n~~--~~-------------~i~~~~~~~v~i~~~~I~~~~~~~n~DGi~~~~s~nv~I 238 (443)
++.+. .+|++|.|. +|...+ .| .+.+..|++++|+++++.+++ ..+|++. |++++|
T Consensus 62 li~~~-~~nv~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp----~~~i~i~-~~nv~i 135 (336)
T 1nhc_A 62 LIRFG-GKDLTVTMADGAVIDGDGSRWWDSKGTNGGKTKPKFMYIHDVEDSTFKGINIKNTP----VQAISVQ-ATNVHL 135 (336)
T ss_dssp SEECC-EESCEEEECTTCEEECCGGGTCCSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCS----SCCEEEE-EEEEEE
T ss_pred EEEEe-cCCEEEEcCCCeEEECCccccccccCcCCCCCCceEEEEeeeCcEEEEEEEEEeCC----ccEEEEE-eCCEEE
Confidence 56554 599999996 664432 23 388899999999999999965 4579999 999999
Q ss_pred EeeEEecC---------CceEEEccCccccccccCCCcccEEEEEEEEeCCCceEEEccccCCcEEEEEEEeeEEeCCce
Q 013402 239 EDSYISTG---------DDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGV 309 (443)
Q Consensus 239 ~n~~i~~g---------dD~i~i~sg~~~~g~~~~~~~~ni~i~n~~~~~~~~gi~igs~~~~~v~nI~i~n~~~~~~~~ 309 (443)
+|++|.+. .|||.+.+ ++||+|+||++..++++|+|++. +||+|+||++.+. +
T Consensus 136 ~~~~I~~~~~d~~~~~ntDGidi~~------------s~nV~I~n~~i~~gDDciaiksg-----~nI~i~n~~~~~g-h 197 (336)
T 1nhc_A 136 NDFTIDNSDGDDNGGHNTDGFDISE------------STGVYISGATVKNQDDCIAINSG-----ESISFTGGTCSGG-H 197 (336)
T ss_dssp ESCEEECTTHHHHTCCSCCSEEECS------------CEEEEEESCEEESSSEEEEESSE-----EEEEEESCEEESS-S
T ss_pred EEEEEECCCcccccCCCCCcEEecC------------CCeEEEEeCEEEcCCCEEEEeCC-----eEEEEEeEEEECC-c
Confidence 99999873 46777765 89999999999999999999973 8999999999986 7
Q ss_pred eEEEEeecC-CCceEEEEEEEeEEEcccCeeEEEEcccCCCCCCCCCCCCCCeEEeEEEEeEEEeccCe-eEEEE---ec
Q 013402 310 GIHVKTNIG-RGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQ-SGLIQ---GL 384 (443)
Q Consensus 310 gi~i~s~~~-~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nIt~~nI~~~~~~~-~~~i~---g~ 384 (443)
|+.|+|... ..+.|+||+|+|+++.+..++++|+.+.+ +.+.++||+|+||++.+... |+.|. +.
T Consensus 198 GisiGS~g~~~~~~v~nV~v~n~~~~~t~~girIkt~~g----------~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~ 267 (336)
T 1nhc_A 198 GLSIGSVGGRDDNTVKNVTISDSTVSNSANGVRIKTIYK----------ETGDVSEITYSNIQLSGITDYGIVIEQDYEN 267 (336)
T ss_dssp EEEEEEESSSSCCEEEEEEEEEEEEESCSEEEEEEEETT----------CCCEEEEEEEEEEEEEEESSEEEEEEEEEET
T ss_pred CceEccCccccCCCEEEEEEEeeEEECCCcEEEEEEECC----------CCCEEeeeEEeeEEeeccccccEEEEeecCC
Confidence 999999632 34789999999999999999999996421 23589999999999998764 77663 21
Q ss_pred ------C--CCCeeeEEEEeEEEEeeC
Q 013402 385 ------K--NSPFTGICLSNINLQGVA 403 (443)
Q Consensus 385 ------~--~~~i~ni~~~nv~~~~~~ 403 (443)
+ ..+++||+|+||+.+.+.
T Consensus 268 ~~~~~~p~~~~~i~~i~~~ni~gt~~~ 294 (336)
T 1nhc_A 268 GSPTGTPSTGIPITDVTVDGVTGTLED 294 (336)
T ss_dssp TEECSCCCSSSCEEEEEEEEEEEEECT
T ss_pred CCCCCCCCCCceEEEEEEEeEEEEeCC
Confidence 2 247999999999999876
No 25
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=99.88 E-value=5.3e-20 Score=184.90 Aligned_cols=170 Identities=17% Similarity=0.145 Sum_probs=145.0
Q ss_pred eEEeeeeeeEEEEeEEEECCCCCCCCCeecccCCccEEEEeeEEecC----CceEEEccCccccccccCCCcccEEEEEE
Q 013402 200 NIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTG----DDLVAVKSGWDEYGIAYGHPSSGITIRRV 275 (443)
Q Consensus 200 ~i~~~~~~~v~i~~~~I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~g----dD~i~i~sg~~~~g~~~~~~~~ni~i~n~ 275 (443)
.+.+..|+|++|++++|.++. .++|++..|+||+|+|++|.++ .|||.+. .+||+|+||
T Consensus 129 ~i~~~~~~nv~I~~iti~nsp----~~~i~i~~~~nv~I~n~~I~~~d~~ntDGidi~-------------~~nV~I~n~ 191 (422)
T 1rmg_A 129 ILRLTDVTHFSVHDIILVDAP----AFHFTMDTCSDGEVYNMAIRGGNEGGLDGIDVW-------------GSNIWVHDV 191 (422)
T ss_dssp EEEEEEEEEEEEEEEEEECCS----SCSEEEEEEEEEEEEEEEEECCSSTTCCSEEEE-------------EEEEEEEEE
T ss_pred EEEEcccceEEEECeEEECCC----ceEEEEeCcCCEEEEeEEEECCCCCCCccEeec-------------CCeEEEEee
Confidence 578899999999999999864 4689999999999999999983 4555553 289999999
Q ss_pred EEeCCCceEEEccccCCcEEEEEEEeeEEeCCceeEEEEeecCCCceEEEEEEEeEEEcccCeeEEEEcccCCCCCCCCC
Q 013402 276 TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFN 355 (443)
Q Consensus 276 ~~~~~~~gi~igs~~~~~v~nI~i~n~~~~~~~~gi~i~s~~~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~ 355 (443)
++...++||+|++ +.+||+|+||++... +|++|++. ++.+.|+||+|+|+++.+..++++|+. +.+
T Consensus 192 ~i~~gDD~Iai~s----~~~nI~I~n~~~~~~-~GisIGS~-g~~~~v~nV~v~n~~~~~~~~Gi~Ikt-~~g------- 257 (422)
T 1rmg_A 192 EVTNKDECVTVKS----PANNILVESIYCNWS-GGCAMGSL-GADTDVTDIVYRNVYTWSSNQMYMIKS-NGG------- 257 (422)
T ss_dssp EEESSSEEEEEEE----EEEEEEEEEEEEESS-SEEEEEEE-CTTEEEEEEEEEEEEEESSSCSEEEEE-BBC-------
T ss_pred EEeCCCCeEEeCC----CCcCEEEEeEEEcCC-cceeeccc-CCCCcEEEEEEEeEEEeccceEEEEEe-cCC-------
Confidence 9999999999997 689999999999876 69999996 345789999999999999999999996 221
Q ss_pred CCCCCeEEeEEEEeEEEeccCeeEEEEec---------CCCCeeeEEEEeEEEEeeC
Q 013402 356 PNALPVVNGITIKDVWGTKVQQSGLIQGL---------KNSPFTGICLSNINLQGVA 403 (443)
Q Consensus 356 ~~~~~~i~nIt~~nI~~~~~~~~~~i~g~---------~~~~i~ni~~~nv~~~~~~ 403 (443)
.+.++||+|+||++.....++.|... ...+++||+|+||+.+...
T Consensus 258 ---~G~v~nI~~~NI~~~~v~~~i~i~~~y~~~~~~~~~~~~i~nI~~~nI~gt~~~ 311 (422)
T 1rmg_A 258 ---SGTVSNVLLENFIGHGNAYSLDIDGYWSSMTAVAGDGVQLNNITVKNWKGTEAN 311 (422)
T ss_dssp ---CEEEEEEEEEEEEEEEESCSEEEETBCTTSCCBSSSCCEEEEEEEEEEEEEESC
T ss_pred ---CcEEEEEEEEeEEEECccccEEEEeeccCCCcccCCCceEEEEEEEeEEEEecc
Confidence 24899999999999998888877632 2357999999999999864
No 26
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=99.88 E-value=5.8e-21 Score=200.34 Aligned_cols=250 Identities=15% Similarity=0.173 Sum_probs=196.5
Q ss_pred eeeEEecCeeeeEEeccCcEEeCCCchhhhhhccCCCCCCCCeeEEEEeecceEEEeEEEec--C-CCceEEeeeeeeEE
Q 013402 134 MSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQN--S-PFWNIHPVYCSNVV 210 (443)
Q Consensus 134 ~~~i~~~~~~nv~I~G~~G~idG~G~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i~n--~-~~~~i~~~~~~~v~ 210 (443)
..++.+.+++|++|.|. +|.-.. .| .+++.+|+|++|+++++.. + ...+|++..|++|+
T Consensus 331 P~~i~~~~~~nv~I~gi--ti~ns~--~~--------------~i~~~~~~nv~i~~v~i~~~~~~NtDGidi~~s~nV~ 392 (608)
T 2uvf_A 331 SSLMTLRGVENVYLAGF--TVRNPA--FH--------------GIMNLENHNVVANGLIHQTYDANNGDGIEFGNSQNVM 392 (608)
T ss_dssp CCSEEEESEEEEEEESC--EEECCS--SC--------------SEEEESCEEEEEESCEEECTTCTTCCSEEEESCEEEE
T ss_pred CeEEEEEeeeeEEEeCc--EEecCC--CC--------------EEEEecCCCEEEeeEEEcCCCCCCCCeEEecCCceEE
Confidence 35788999999999997 444221 23 4999999999999999865 2 25689999999999
Q ss_pred EEeEEEECCCC------CCCCCeecccCCccEEEEeeEEecCCceEEEccCccccccccCCCcccEEEEEEEEeCCCceE
Q 013402 211 IRYVTILAPAD------SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 284 (443)
Q Consensus 211 i~~~~I~~~~~------~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~sg~~~~g~~~~~~~~ni~i~n~~~~~~~~gi 284 (443)
|+|++|.+..+ +.+.||++...|+||+|+||++..+++++.++++ .....+||+|+||+|.+..+|+
T Consensus 393 I~n~~i~~gDD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~ghg~~~iGS~-------~~~~v~nI~v~n~~~~~t~~Gi 465 (608)
T 2uvf_A 393 VFNNFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTGSH-------TGAWIEDILAENNVMYLTDIGL 465 (608)
T ss_dssp EESCEEECSSCSEEEECCCSGGGGGSCCEEEEEEESCEECSSSCSEEEESC-------CTTCEEEEEEESCEEESCSEEE
T ss_pred EEeeEEecCCceEEecCCcCccccccccccCEEEEeEEEeCCCCeEEEccc-------CCCCEEEEEEEeEEEECCCceE
Confidence 99999998653 3455666666789999999999999998888875 2234899999999999988999
Q ss_pred EEccc--cCCcEEEEEEEeeEEeCC-ceeEEEEeecC------------CCceEEEEEEEeEEEcccC---eeEEEEccc
Q 013402 285 AVGSE--TSGGVENVLAEHINLYNV-GVGIHVKTNIG------------RGGFIRNITVSDVYMENAR---KGIKIAGDV 346 (443)
Q Consensus 285 ~igs~--~~~~v~nI~i~n~~~~~~-~~gi~i~s~~~------------~~g~v~nI~~~ni~~~~~~---~~i~i~~~~ 346 (443)
+|++. ..+.++||+|+|++|.+. ..+|.|..... ..+.+++|+|+||++++.. .++.|...
T Consensus 466 rIKt~~g~gG~v~nI~~~ni~m~~v~~~~i~I~~~y~~~~~~~~~~~~~~~~~~~~V~i~nI~~~n~~gt~~~i~i~g~- 544 (608)
T 2uvf_A 466 RAKSTSTIGGGARNVTFRNNAMRDLAKQVMVMTLDYADSNANIDYPPAKIPAQFYDFTLKNVTVDNSTGKNPSIEIKGD- 544 (608)
T ss_dssp EEEEETTTCCEEEEEEEEEEEEEEESSEEEEEEEECCCCSCCCSSCCCSSCCEEEEEEEEEEEEEEECSSSCSEEEECB-
T ss_pred EEeeecCCCceEECcEEEeeEEEccccccEEEEeccCCCCcccccCCcCCCCccccEEEEeEEEEeeeceEEeEEEEEE-
Confidence 99985 345699999999999998 58999987653 1366999999999999875 46777642
Q ss_pred CCCCCCCCCCCCCCeEEeEEEEeEEEeccCeeEEEEecCCCCeeeEEEEeEEEEeeCCCCCCCeeeeecccCcC-cccCC
Q 013402 347 GDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPW 425 (443)
Q Consensus 347 ~~~~~~~~~~~~~~~i~nIt~~nI~~~~~~~~~~i~g~~~~~i~ni~~~nv~~~~~~~~~~~~~~c~~v~~~~~-~~~p~ 425 (443)
++....++||+|+||+++... +..|. .+++++|+||++....+. +.|.|.++.+... ++.|.
T Consensus 545 ---------~~~~~p~~ni~~~nv~i~~~~-~~~i~-----~~~~~~~~nv~i~~~~~~--~~~~~~~v~~~~~~~v~~~ 607 (608)
T 2uvf_A 545 ---------TANKAWHRLVHVNNVQLNNVT-PTAIS-----DLRDSEFNKVTFTELRGD--TPWHFSEVKNVKVDGKPVA 607 (608)
T ss_dssp ---------GGGTBCEEEEEEEEEEEESCC-CCEEE-----SEESCEEEEEEEESCSSS--CSCCEESCBSCCBTTCCC-
T ss_pred ---------cCCCCccccEEEEeEEEEccC-ceeEE-----eccCceEEeEEEeCCCCC--ccEEEEeeeceEEcceEeC
Confidence 111125999999999998764 55555 579999999999875532 4599999999874 67665
Q ss_pred C
Q 013402 426 P 426 (443)
Q Consensus 426 ~ 426 (443)
|
T Consensus 608 p 608 (608)
T 2uvf_A 608 P 608 (608)
T ss_dssp -
T ss_pred C
Confidence 4
No 27
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=99.88 E-value=2.3e-20 Score=185.43 Aligned_cols=198 Identities=18% Similarity=0.223 Sum_probs=164.3
Q ss_pred CeeEEEEeecceEEEeE-EEecCC----------Cc-----------------eEEeeeeeeEEEEeEEEECCCCCCCCC
Q 013402 175 PNLIEFMNSRSIIISNV-IFQNSP----------FW-----------------NIHPVYCSNVVIRYVTILAPADSPNTD 226 (443)
Q Consensus 175 ~~~i~~~~~~nv~I~~v-~i~n~~----------~~-----------------~i~~~~~~~v~i~~~~I~~~~~~~n~D 226 (443)
..+|.+.+.+|++|.|. +|...+ .| .+.+..|+|++|+++++.+++ ..
T Consensus 100 ~~~I~~~~~~ni~I~G~G~IdG~G~~~~~~~~~~ww~~~~~~~~~~~~~~rp~~i~~~~~~nv~I~~iti~nsp----~~ 175 (376)
T 1bhe_A 100 DAFITAVSTTNSGIYGPGTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSP----NF 175 (376)
T ss_dssp CCSEEEESCBSCEEECSSEEECCTTSCCSSSSSCTTHHHHHHHHHTCEECCCCSEEEESCEEEEEEEEEEECCS----SC
T ss_pred ccEEEEECCEeEEEEeCEEEECCCCcccCCCccccccccccccccCccCCCCeEEEEEcceEEEEEeEEEECCC----cE
Confidence 45789999999999986 554433 12 367889999999999999965 35
Q ss_pred eecccCCccEEEEeeEEec-----CCceEEEccCccccccccCCCcccEEEEEEEEeCCCceEEEcccc-CCcEEEEEEE
Q 013402 227 GIDPDSSSNVCIEDSYIST-----GDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET-SGGVENVLAE 300 (443)
Q Consensus 227 Gi~~~~s~nv~I~n~~i~~-----gdD~i~i~sg~~~~g~~~~~~~~ni~i~n~~~~~~~~gi~igs~~-~~~v~nI~i~ 300 (443)
++++..|++++|+|++|.+ ..|||.+.+ ++||+|+||++..+++||++++.. ....+||+|+
T Consensus 176 ~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~------------s~nV~I~n~~i~~gDDcIaiks~~~~~~s~nI~I~ 243 (376)
T 1bhe_A 176 HVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMS------------SKNITIAYSNIATGDDNVAIKAYKGRAETRNISIL 243 (376)
T ss_dssp SEEEESCEEEEEEEEEEECCTTCSSCCSEEEES------------CEEEEEESCEEECSSCSEEEEECTTSCCEEEEEEE
T ss_pred EEEEeCCCcEEEEeEEEECCCCCCCCceEeecC------------CceEEEEeCEEecCCCeEEEcccCCCCCceEEEEE
Confidence 6888899999999999987 467888876 899999999999999999999742 2479999999
Q ss_pred eeEEeCCceeEEEEeecCCCceEEEEEEEeEEEcccCeeEEEEcccCCCCCCCCCCCCCCeEEeEEEEeEEEeccCeeEE
Q 013402 301 HINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL 380 (443)
Q Consensus 301 n~~~~~~~~gi~i~s~~~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nIt~~nI~~~~~~~~~~ 380 (443)
||++.. .+|+.|+|... .|+||+|+|+++.+..++++|+.+. .+.+.++||+|+||++.+...|+.
T Consensus 244 n~~~~~-ghGisiGSe~~---~v~nV~v~n~~~~~t~~GirIKt~~----------g~~G~v~ni~f~ni~~~~v~~~i~ 309 (376)
T 1bhe_A 244 HNDFGT-GHGMSIGSETM---GVYNVTVDDLKMNGTTNGLRIKSDK----------SAAGVVNGVRYSNVVMKNVAKPIV 309 (376)
T ss_dssp EEEECS-SSCEEEEEEES---SEEEEEEEEEEEESCSEEEEEECCT----------TTCCEEEEEEEEEEEEESCSEEEE
T ss_pred eeEEEc-cccEEeccCCc---cEeeEEEEeeEEeCCCcEEEEEEec----------CCCceEeeEEEEeEEEeCCCceEE
Confidence 999987 48999998642 7999999999999999999999642 123589999999999999988888
Q ss_pred EEecC-------CCCeeeEEEEeEEEEee
Q 013402 381 IQGLK-------NSPFTGICLSNINLQGV 402 (443)
Q Consensus 381 i~g~~-------~~~i~ni~~~nv~~~~~ 402 (443)
|.... ...++||+|+||+.+..
T Consensus 310 i~~~y~~~~~~~~~~i~ni~~~ni~gt~~ 338 (376)
T 1bhe_A 310 IDTVYEKKEGSNVPDWSDITFKDVTSETK 338 (376)
T ss_dssp EETTSSCCCCCCCCEEEEEEEEEEEECSC
T ss_pred EEeeccCCCCCcCcEEEEEEEEEEEEEec
Confidence 85321 23499999999998864
No 28
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=99.88 E-value=2.5e-21 Score=188.66 Aligned_cols=198 Identities=16% Similarity=0.227 Sum_probs=154.9
Q ss_pred eEEEEeecceEEEeE--EEecCC--Cc-------------eEEeeeeeeEEEEeEEEECCCCCCCCCeecccCCcc-EEE
Q 013402 177 LIEFMNSRSIIISNV--IFQNSP--FW-------------NIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSN-VCI 238 (443)
Q Consensus 177 ~i~~~~~~nv~I~~v--~i~n~~--~~-------------~i~~~~~~~v~i~~~~I~~~~~~~n~DGi~~~~s~n-v~I 238 (443)
+|.+. ++|++|.|- +|...+ .| .+.+..|+ ++|+++++.+++ ...+++..|++ |+|
T Consensus 60 ~i~~~-~~ni~I~G~~G~idG~G~~ww~~~~~~~~~~rP~~i~~~~~~-v~i~giti~nsp----~~~i~i~~~~n~v~i 133 (335)
T 1k5c_A 60 LFTID-GTGINFVGADHIFDGNGALYWDGKGTNNGTHKPHPFLKIKGS-GTYKKFEVLNSP----AQAISVGPTDAHLTL 133 (335)
T ss_dssp SEEEE-EEEEEEECTTCEEECCGGGTCCSCTTTSSSCCCCCSEEEEEE-EEEESCEEESCS----SCCEEEEEEEEEEEE
T ss_pred EEEEE-ccCEEEEeCccEEcCChhHhhhcccccCCCCCCeEEEEeceE-EEEEEEEEECCC----cceEEEEccCCeEEE
Confidence 57775 699999993 553321 12 26788999 999999999975 46799999999 999
Q ss_pred EeeEEecC-CceEEEcc-CccccccccCCCcccEEEEEEEEeCCCceEEEccccCCcEEEEEEEeeEEeCCceeEEEEee
Q 013402 239 EDSYISTG-DDLVAVKS-GWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTN 316 (443)
Q Consensus 239 ~n~~i~~g-dD~i~i~s-g~~~~g~~~~~~~~ni~i~n~~~~~~~~gi~igs~~~~~v~nI~i~n~~~~~~~~gi~i~s~ 316 (443)
+|+++.+. +|+ +. ....+|+.. .++||+|+||++..++++|+|++. +||+|+||++... +|+.|+|.
T Consensus 134 ~~v~I~~~~~d~---~~~~~NtDGidi--~s~nV~I~n~~i~~gDDcIaiksg-----~nI~i~n~~~~~g-hGisIGS~ 202 (335)
T 1k5c_A 134 DGITVDDFAGDT---KNLGHNTDGFDV--SANNVTIQNCIVKNQDDCIAINDG-----NNIRFENNQCSGG-HGISIGSI 202 (335)
T ss_dssp ESCEEECGGGGG---GGCCCSCCSEEE--ECSSEEEESCEEESSSCSEEEEEE-----EEEEEESCEEESS-CCEEEEEE
T ss_pred EEEEEECCCCcc---cccCCCCCeEcc--cCCeEEEEeeEEEcCCCEEEeeCC-----eeEEEEEEEEECC-ccCeEeec
Confidence 99999983 332 11 122333333 389999999999999999999984 8999999999986 79999997
Q ss_pred cCCCceEEEEEEEeEEEcccCeeEEEEcccCCCCCCCCCCCCCCeEEeEEEEeEEEeccC-eeEEEEe-------cC--C
Q 013402 317 IGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQ-QSGLIQG-------LK--N 386 (443)
Q Consensus 317 ~~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nIt~~nI~~~~~~-~~~~i~g-------~~--~ 386 (443)
.. .+.|+||+|+|+++.+..++++|+.+.+. +.+.++||+|+||++++.. .|+.|.. .+ .
T Consensus 203 g~-~~~v~nV~v~n~~~~~t~~girIKt~~g~---------~~G~v~nI~f~ni~~~~v~~~~i~i~~~Y~~~~~~p~~~ 272 (335)
T 1k5c_A 203 AT-GKHVSNVVIKGNTVTRSMYGVRIKAQRTA---------TSASVSGVTYDANTISGIAKYGVLISQSYPDDVGNPGTG 272 (335)
T ss_dssp CT-TCEEEEEEEESCEEEEEEEEEEEEEETTC---------CSCEEEEEEEESCEEEEEEEEEEEEEEEETSSSSSCCSS
T ss_pred cC-CCCEEEEEEEeeEEECCCceEEEEEeCCC---------CcceEeeeEEEEEEEEccccccEEEEeeCCCCCCCCCCC
Confidence 32 58899999999999999999999964221 1157999999999999875 5777753 12 3
Q ss_pred CCeeeEEEEeEEEEe
Q 013402 387 SPFTGICLSNINLQG 401 (443)
Q Consensus 387 ~~i~ni~~~nv~~~~ 401 (443)
.+++||+|+||++.+
T Consensus 273 ~~i~nI~~~nI~~~G 287 (335)
T 1k5c_A 273 APFSDVNFTGGATTI 287 (335)
T ss_dssp SCEEEEEECSSCEEE
T ss_pred ceEEEEEEEEEEEee
Confidence 579999999999543
No 29
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=99.87 E-value=1.7e-20 Score=183.99 Aligned_cols=195 Identities=15% Similarity=0.170 Sum_probs=157.3
Q ss_pred eeEEEEeecceEEEe---EEEecCC--Cc--------------eEEe-e-eeeeEEEEeEEEECCCCCCCCCeecccCCc
Q 013402 176 NLIEFMNSRSIIISN---VIFQNSP--FW--------------NIHP-V-YCSNVVIRYVTILAPADSPNTDGIDPDSSS 234 (443)
Q Consensus 176 ~~i~~~~~~nv~I~~---v~i~n~~--~~--------------~i~~-~-~~~~v~i~~~~I~~~~~~~n~DGi~~~~s~ 234 (443)
.+|.+. .+|++|.| -+|...+ .| .+.+ . .|++++|+++++.+++ ..+|++..|+
T Consensus 62 ~~i~~~-~~ni~I~G~~~G~IdG~G~~ww~~~~~~~~~~~rP~~i~~~~~~~~nv~I~giti~nsp----~~~i~i~~~~ 136 (349)
T 1hg8_A 62 NPIVIS-GSNITITGASGHVIDGNGQAYWDGKGSNSNSNQKPDHFIVVQKTTGNSKITNLNIQNWP----VHCFDITGSS 136 (349)
T ss_dssp CSEEEE-EESCEEEECTTCEEECCGGGTCCSCTTCTTSCCCCSEEEEEEEEESSEEEESCEEECCS----SEEEEEESCE
T ss_pred ceEEEE-CccEEEEecCCCEEcCCcchhhhcccccCCCCCCCeEEEEeecCcCcEEEEEEEEEcCC----CceEEEeccC
Confidence 457774 59999999 5665432 12 4667 6 7889999999999975 5789999999
Q ss_pred cEEEEeeEEecC-----------------CceEEEccCccccccccCCCcccEEEEEEEEeCCCceEEEccccCCcEEEE
Q 013402 235 NVCIEDSYISTG-----------------DDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENV 297 (443)
Q Consensus 235 nv~I~n~~i~~g-----------------dD~i~i~sg~~~~g~~~~~~~~ni~i~n~~~~~~~~gi~igs~~~~~v~nI 297 (443)
+++|+|++|.+. .|||.+.+ ++||+|+||++..++++|+|++. +||
T Consensus 137 nv~i~~~~I~~~~~~~~~~~~~~~~~~~NtDGid~~~------------s~nV~I~n~~i~~gDDcIaiksg-----~nI 199 (349)
T 1hg8_A 137 QLTISGLILDNRAGDKPNAKSGSLPAAHNTDGFDISS------------SDHVTLDNNHVYNQDDCVAVTSG-----TNI 199 (349)
T ss_dssp EEEEEEEEEECGGGSSCCTTTTTSCSCCSCCSEEEES------------CEEEEEEEEEEECSSCSEEESSE-----EEE
T ss_pred CEEEEEEEEECCCCccccccccccccCCCCCeEEEcc------------ccEEEEEeeEEecCCCeEEeeCC-----eEE
Confidence 999999999862 45666654 89999999999988999999973 899
Q ss_pred EEEeeEEeCCceeEEEEeec-CCCceEEEEEEEeEEEcccCeeEEEEcccCCCCCCCCCCCCCCeEEeEEEEeEEEeccC
Q 013402 298 LAEHINLYNVGVGIHVKTNI-GRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQ 376 (443)
Q Consensus 298 ~i~n~~~~~~~~gi~i~s~~-~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nIt~~nI~~~~~~ 376 (443)
+|+||++.+. +||.|+|.. ...+.|+||+|+|+++.+..++++|+.+. .+.+.++||+|+||++.+..
T Consensus 200 ~i~n~~~~~g-hGisiGS~G~~~~~~v~nV~v~n~~~~~~~~GirIKt~~----------g~~G~v~nI~~~ni~~~~v~ 268 (349)
T 1hg8_A 200 VVSNMYCSGG-HGLSIGSVGGKSDNVVDGVQFLSSQVVNSQNGCRIKSNS----------GATGTINNVTYQNIALTNIS 268 (349)
T ss_dssp EEEEEEEESS-CCEEEEEESSSSCCEEEEEEEEEEEEEEEEEEEEEEEET----------TCCEEEEEEEEEEEEEEEEE
T ss_pred EEEeEEEeCC-cceEEccccccccCCEEEEEEEEEEEECCCcEEEEEecC----------CCCccccceEEEEEEEEccc
Confidence 9999999876 799999972 13478999999999999999999999642 12358999999999999875
Q ss_pred -eeEEEEec---------CC--CCeeeEEEEeEEEEeeC
Q 013402 377 -QSGLIQGL---------KN--SPFTGICLSNINLQGVA 403 (443)
Q Consensus 377 -~~~~i~g~---------~~--~~i~ni~~~nv~~~~~~ 403 (443)
.++.|... +. .+++||+|+||+.+...
T Consensus 269 ~~~i~i~~~Y~~~~~~~~p~~~~~i~~I~~~ni~gt~~~ 307 (349)
T 1hg8_A 269 TYGVDVQQDYLNGGPTGKPTNGVKISNIKFIKVTGTVAS 307 (349)
T ss_dssp EEEEEEEEEECSSSBCSCCCSSEEEEEEEEEEEEEEECT
T ss_pred cccEEEEeeccCCCCCCcccCCceEEEEEEEeEEEEeCC
Confidence 57766431 11 36999999999998865
No 30
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=99.75 E-value=1e-16 Score=165.21 Aligned_cols=251 Identities=14% Similarity=0.115 Sum_probs=171.2
Q ss_pred CCCeE-EEECCCceEEEEeEeccccEEEEccCcEEEecCCCCCCCCcCCCCCCCcccccCC-CcceeeEEecCeeeeEEe
Q 013402 71 SGGTL-LYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYGRGRERPG-GRYMSFIHGDGLQDVVIT 148 (443)
Q Consensus 71 ~gg~~-V~ip~G~Y~~~~l~l~s~~tl~~~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~nv~I~ 148 (443)
+.+-+ |++++|.++.+++.+++...|.+..+++|.+.... -|.. . ...+......+. -.+..++...+|+||.|.
T Consensus 262 kSnvt~L~L~~GA~l~g~i~~~~~~nv~ItG~GtIDG~G~~-ww~~-~-~~~~~~~~~rp~~i~~~~~~~~~~c~NV~I~ 338 (574)
T 1ogo_X 262 NSNTYWVYLAPGAYVKGAIEYFTKQNFYATGHGILSGENYV-YQAN-A-GDNYIAVKSDSTSLRMWWHNNLGGGQTWYCV 338 (574)
T ss_dssp CTTCCEEEECTTEEEESCEEECCSSCEEEESSCEEECTTSC-TTCB-T-TTTTBSCCCTTTBCCSEEECSCCSSEEEEEE
T ss_pred cCCCceEEecCCcEEEccEEEeCceeEEEEeCEEEeCCCcc-cccc-c-ccccccccCCcceEEEEeccccCCceeEEEE
Confidence 34556 89999999999999998778888877898876421 1111 0 000000000000 011112223489999999
Q ss_pred ccCcEEeCCCchhhhhhccCCCCCCCCeeEEEEeecce--EEEeEEEecCCC---ceEEeeeeeeEEEEeEEEECCCCCC
Q 013402 149 GENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSI--IISNVIFQNSPF---WNIHPVYCSNVVIRYVTILAPADSP 223 (443)
Q Consensus 149 G~~G~idG~G~~~~~~~~~~~~~~~~~~~i~~~~~~nv--~I~~v~i~n~~~---~~i~~~~~~~v~i~~~~I~~~~~~~ 223 (443)
|. ...+. ..| .+++..|+|+ +|+++++.+++. .+|++. +||+|+||+|.+.
T Consensus 339 Gi-ti~NS---p~w--------------~i~~~~c~nV~~~I~nv~i~~~~~~nTDGIDi~--~NV~I~nc~I~~g---- 394 (574)
T 1ogo_X 339 GP-TINAP---PFN--------------TMDFNGNSGISSQISDYKQVGAFFFQTDGPEIY--PNSVVHDVFWHVN---- 394 (574)
T ss_dssp SC-EEECC---SSC--------------SEEECSSSCEEEEEEEEEEECCCSTTCCCCBCC--TTCEEEEEEEEES----
T ss_pred Ce-EEECC---CCc--------------EEeecCCCChhhEEEeeEeeCCCCCCCccCccc--CCEEEEeeEEECC----
Confidence 97 44442 233 2889999999 999999887544 478887 9999999999985
Q ss_pred CCCeecccCCccEEEEeeEEecCCc-e-EEEccCccccccccCCCcccEEEEEEEEeCCCc--------eEEEccc----
Q 013402 224 NTDGIDPDSSSNVCIEDSYISTGDD-L-VAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS--------GIAVGSE---- 289 (443)
Q Consensus 224 n~DGi~~~~s~nv~I~n~~i~~gdD-~-i~i~sg~~~~g~~~~~~~~ni~i~n~~~~~~~~--------gi~igs~---- 289 (443)
.|+|.+.+ +||+|+||.+.++.. + |.+++. .+..+||+|+||++.+... +..+|++
T Consensus 395 -DDcIaIks-~NI~I~nc~i~~g~g~g~IsIGS~--------~g~V~NV~v~N~~i~~~~~~~~~~~~~g~iiGs~~~y~ 464 (574)
T 1ogo_X 395 -DDAIKIYY-SGASVSRATIWKCHNDPIIQMGWT--------SRDISGVTIDTLNVIHTRYIKSETVVPSAIIGASPFYA 464 (574)
T ss_dssp -SCSEECCS-TTCEEEEEEEEECSSSCSEECCSS--------CCCEEEEEEEEEEEEECCCSSCCTTTTCEEEEECCCSS
T ss_pred -CCEEEECC-ccEEEEeEEEECCCCCceEEEcCC--------CCcEEEEEEEeEEEECCcccceeccccceeeccccccc
Confidence 58998875 999999999998654 4 888762 2358999999999976532 3333332
Q ss_pred ------cCCcEEEEEEEeeEEeCCceeEEEEeecCCCceEEEEEEEeEEEcc------cCe-eEEEEcccCCCCCCCCCC
Q 013402 290 ------TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN------ARK-GIKIAGDVGDHPDDKFNP 356 (443)
Q Consensus 290 ------~~~~v~nI~i~n~~~~~~~~gi~i~s~~~~~g~v~nI~~~ni~~~~------~~~-~i~i~~~~~~~~~~~~~~ 356 (443)
...++ ||+|+|++|.+...++ |...+ .+.|+||+|+|+++++ ... +..+.+. +
T Consensus 465 ~~~~~~~g~gV-NI~f~NI~~~~v~~~i-i~i~p--~~~I~nI~~~NI~i~g~~~~~~~~~~~~~i~G~----------~ 530 (574)
T 1ogo_X 465 SGMSPDSRKSI-SMTVSNVVCEGLCPSL-FRITP--LQNYKNFVVKNVAFPDGLQTNSIGTGESIIPAA----------S 530 (574)
T ss_dssp SSCCCEEEEEE-EEEEEEEEECSSBCEE-EEECC--SEEEEEEEEEEEEETTCBCCSTTCTTCEEECCC----------T
T ss_pred cccccCCCceE-EEEEEeEEEEceeEee-EEECC--CCCEEEEEEEeEEEeCccccccccccceeEecC----------C
Confidence 11128 9999999999988775 44332 4679999999999986 211 1122211 1
Q ss_pred CCCCeEEeEEEEeEEEecc
Q 013402 357 NALPVVNGITIKDVWGTKV 375 (443)
Q Consensus 357 ~~~~~i~nIt~~nI~~~~~ 375 (443)
..++||+|+||++.+.
T Consensus 531 ---~~v~nI~~~NV~i~g~ 546 (574)
T 1ogo_X 531 ---GLTMGLAISAWTIGGQ 546 (574)
T ss_dssp ---TCCEEEEEEEEEETTE
T ss_pred ---CccceEEEEeEEEeCE
Confidence 2589999999999754
No 31
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=99.75 E-value=1.2e-16 Score=164.84 Aligned_cols=276 Identities=16% Similarity=0.130 Sum_probs=178.2
Q ss_pred CCCeE-EEECCCceEEEEeEecccc-EEEEccCcEEEecCCC------CCCCCcCCCCCCCcccccCCCcceeeEEecCe
Q 013402 71 SGGTL-LYVPPGVYLTGSFNLTSHM-TLYLAKGAVIKATQDT------WNWPLIAPLPSYGRGRERPGGRYMSFIHGDGL 142 (443)
Q Consensus 71 ~gg~~-V~ip~G~Y~~~~l~l~s~~-tl~~~~ga~l~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 142 (443)
+++.+ +++++|.++.+++.+.+++ .|.+...++|.+.... ..|+... ..+.++. .+..++...++
T Consensus 220 ~s~~~~L~l~~GA~L~gs~~~~~~~~nv~ItG~GtIDG~G~~ww~~~~~~~~~~~--~~rp~~i-----~~~~~~~~~~c 292 (549)
T 1x0c_A 220 SSSVTWVYFAPGAYVKGAVEFLSTASEVKASGHGVLSGEQYVWYADPDEGYQKAS--GANNNGL-----RMWRGTLGNSS 292 (549)
T ss_dssp CTTCCEEEECTTEEEESCEEECCCSSEEEEESSCEEECTTSCTTEEGGGTTEECG--GGCSCCC-----CSEEEECCSSC
T ss_pred cCCCCeEecCCCCEEEEEEEEecCceeEEEEeeEEEECCCceecccCcccccccc--cCCCceE-----EEeeccccCCc
Confidence 56667 9999999999988888533 5555555888876531 1111000 0000000 11122334889
Q ss_pred eeeEEeccCcEEeCCCchhhhhhccCCCCCCCCeeEEEE-ee-cc--eEEEeEEEecCC---CceEEeeeeeeEEEEeEE
Q 013402 143 QDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFM-NS-RS--IIISNVIFQNSP---FWNIHPVYCSNVVIRYVT 215 (443)
Q Consensus 143 ~nv~I~G~~G~idG~G~~~~~~~~~~~~~~~~~~~i~~~-~~-~n--v~I~~v~i~n~~---~~~i~~~~~~~v~i~~~~ 215 (443)
+|+.|.|. ...+. ++| .+++. .| +| ++|+++++.++. ..++++. +||+|+|++
T Consensus 293 ~nV~I~Gi-ti~Ns---p~w--------------~i~i~~~~~~ni~V~I~n~~i~~~~~~NTDGidi~--~nV~I~n~~ 352 (549)
T 1x0c_A 293 QTFVLNGV-TVSAP---PFN--------------SMDWSGNSLDLITCRVDDYKQVGAFYGQTDGLEMY--PGTILQDVF 352 (549)
T ss_dssp EEEEEESC-EEECC---SSC--------------SEEEECSCGGGEEEEEEEEEEECCCBTTCCCCBCC--TTCEEEEEE
T ss_pred eEEEEECc-EEECC---Cce--------------eEEeeccCCCCCeEEEEeeEeEcCCCCCCCccccc--CCEEEEeeE
Confidence 99999997 33332 234 26655 45 69 999999998753 3567777 999999999
Q ss_pred EECCCCCCCCCeecccCCccEEEEeeEEecCCc-e-EEEccCccccccccCCCcccEEEEEEEEeCCCc------eEEEc
Q 013402 216 ILAPADSPNTDGIDPDSSSNVCIEDSYISTGDD-L-VAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS------GIAVG 287 (443)
Q Consensus 216 I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gdD-~-i~i~sg~~~~g~~~~~~~~ni~i~n~~~~~~~~------gi~ig 287 (443)
|.+. .|+|.+.+ +||+|+||.+..+.. + |.+++. ....+||+|+||++.+... +..|+
T Consensus 353 i~~g-----DDcIaIks-~NI~I~n~~~~~~~g~~~IsiGs~--------~~~V~NV~v~n~~i~~s~~~k~~~~g~iI~ 418 (549)
T 1x0c_A 353 YHTD-----DDGLKMYY-SNVTARNIVMWKESVAPVVEFGWT--------PRNTENVLFDNVDVIHQAYANAGNNPGIFG 418 (549)
T ss_dssp EEES-----SCCEECCS-SSEEEEEEEEEECSSSCSEECCBS--------CCCEEEEEEEEEEEEECCCCSGGGCCCSEE
T ss_pred EeCC-----CCEEEECC-CCEEEEeeEEEcCCCCceEEECCC--------CCcEEEEEEEeeEEECccccccccceEEEe
Confidence 9985 58999975 999999999987543 4 777762 2358999999999977531 22244
Q ss_pred c------c------c-CCcEEEEEEEeeEEeCCc-eeEEEEeec-CCCceEEEEEEEeEEEcccC-----e-eEEEEccc
Q 013402 288 S------E------T-SGGVENVLAEHINLYNVG-VGIHVKTNI-GRGGFIRNITVSDVYMENAR-----K-GIKIAGDV 346 (443)
Q Consensus 288 s------~------~-~~~v~nI~i~n~~~~~~~-~gi~i~s~~-~~~g~v~nI~~~ni~~~~~~-----~-~i~i~~~~ 346 (443)
+ + . .+.++||+|+|++|.+.. .|+.+.... ..++.|+||+|+||++++.. . +..+.. |
T Consensus 419 ~~~~~~~g~~~~~~d~~G~i~nI~f~NI~i~nv~~~g~~~~~~~g~pg~~I~nI~i~NI~i~~~~~~~~~~~~~~i~G-~ 497 (549)
T 1x0c_A 419 AVNNYLYAPDGLSSNHSTGNSNMTVRNITWSNFRAEGSSSALFRINPIQNLDNISIKNVSIESFEPLSINTTESWMPV-W 497 (549)
T ss_dssp ECCBTTTCTTSCCSCCCCBEEEEEEEEEEEEEEEEEEEECCSEEECCSEEEEEEEEEEEEEEEECCGGGTCSCEEECC-C
T ss_pred cccccccCccccCcCCCceEccEEEEeEEEEeEEEeceEEeeecCCCCCcCccEEEEEEEEEccccccccccceEEeC-C
Confidence 3 2 2 457999999999998875 555432111 12346999999999998765 2 233332 2
Q ss_pred CCCCCCCCCCCCCCeEEeEEEEeEEEeccC-------eeEEEEecCCCCeeeEE
Q 013402 347 GDHPDDKFNPNALPVVNGITIKDVWGTKVQ-------QSGLIQGLKNSPFTGIC 393 (443)
Q Consensus 347 ~~~~~~~~~~~~~~~i~nIt~~nI~~~~~~-------~~~~i~g~~~~~i~ni~ 393 (443)
... . ..... .++||+|+||++.+.. .+..|.|.++.+-..++
T Consensus 498 ~~~-~---~~~~~-~v~nI~f~NV~i~G~~i~~~n~~~~g~~~~~~~~~~~~~~ 546 (549)
T 1x0c_A 498 YDL-N---NGKQI-TVTDFSIEGFTVGNTTITASNAASVGRIDGVDPAYAGSVH 546 (549)
T ss_dssp BBT-T---TCCBC-CEEEEEEEEEEETTEECCTTTTTTTTCEEEECTTTGGGEE
T ss_pred Ccc-c---cccce-eeeeEEEEeEEEeCeEeecccccccceecccCCCCcccee
Confidence 110 0 01112 5999999999887642 34556666655544333
No 32
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=99.63 E-value=7.3e-15 Score=142.68 Aligned_cols=242 Identities=12% Similarity=0.076 Sum_probs=169.4
Q ss_pred CCCceEEEeec----cccCCCcchhHHHHHHHHHHhhh----hccCCCeEEEECCCceEE-EEeEeccc-cEEEEccCcE
Q 013402 34 YRNDKISITDF----GGVGDGKTLNTKAFREAIYRIQH----LRRSGGTLLYVPPGVYLT-GSFNLTSH-MTLYLAKGAV 103 (443)
Q Consensus 34 ~~~~~~nV~dy----Ga~gDg~tddt~aiq~Ai~~~~~----~~~~gg~~V~ip~G~Y~~-~~l~l~s~-~tl~~~~ga~ 103 (443)
+.+..++|++| +|+||+.+|++++|+++|+++.. ..+++|++|++|||+|.+ +++.+... ++|.++.++.
T Consensus 10 ~~~~~~~vt~~~~~~~~~~~~~~d~~~~i~~~ia~~~~~~~~~~A~pGdvI~L~~G~Y~l~g~ivIdkp~LtL~G~~~g~ 89 (410)
T 2inu_A 10 NSPNTYDVTTWRIKAHPEVTAQSDIGAVINDIIADIKQRQTSPDARPGAAIIIPPGDYDLHTQVVVDVSYLTIAGFGHGF 89 (410)
T ss_dssp --CCEEETTTCCBTTBTTCCHHHHHHHHHHHHHHHHHHHCCCTTSCCCEEEECCSEEEEECSCEEECCTTEEEECSCCCC
T ss_pred ccCceEEEEEecccCCCcCCCchhHHHHHHHHHHHhhcccccccCCCCCEEEECCCeeccCCcEEEecCcEEEEecCCCc
Confidence 45678999999 89999999999999999999862 113689999999999985 79999877 9999876343
Q ss_pred ----EEecCCCCCCCCcCCCCCCCccccc--CC-CcceeeEEecC-----eeeeEEeccCcEEeCC-----Cchhhhhhc
Q 013402 104 ----IKATQDTWNWPLIAPLPSYGRGRER--PG-GRYMSFIHGDG-----LQDVVITGENGTIDGQ-----GAIWWNMWR 166 (443)
Q Consensus 104 ----l~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~i~~~~-----~~nv~I~G~~G~idG~-----G~~~~~~~~ 166 (443)
|.+......|..+. +.|..+ .. ..-...|.... .++|+|.+. +|+|. |...
T Consensus 90 ~s~~Id~~~~~~g~~~~~-----g~Gs~I~V~a~~~~g~a~~V~~~g~~r~s~V~~~~v--~I~G~~~~~~G~s~----- 157 (410)
T 2inu_A 90 FSRSILDNSNPTGWQNLQ-----PGASHIRVLTSPSAPQAFLVKRAGDPRLSGIVFRDF--CLDGVGFTPGKNSY----- 157 (410)
T ss_dssp CCHHHHHTSCCTTCSCCS-----CCSEEEEECCCTTSCEEEEECCCSSSCEECCEEESC--EEECCCCSSSTTSC-----
T ss_pred ceeEEecccccCcccccC-----CCCcEEEEeccccccceeEEeeccCcccCCcEECCE--EEECCEeecCCCCc-----
Confidence 44221112222111 001000 00 00011222221 356666665 66654 4221
Q ss_pred cCCCCCCCCeeEEEEe-ecceEEEeEEEecCCCceEEeeeeeeEEEEeEEEECCCCCCCCCeecccC-CccEEEEeeEEe
Q 013402 167 QRTLPFTRPNLIEFMN-SRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDS-SSNVCIEDSYIS 244 (443)
Q Consensus 167 ~~~~~~~~~~~i~~~~-~~nv~I~~v~i~n~~~~~i~~~~~~~v~i~~~~I~~~~~~~n~DGi~~~~-s~nv~I~n~~i~ 244 (443)
......|.+.. +++++|++..|.+. .++|.+..+++.+|++..|.. ...||+++. ++...|+++.+.
T Consensus 158 -----~~~dAGI~v~~~~d~~~I~nn~i~~~-~fGI~l~~a~~~~I~~N~I~e-----~GNgI~L~G~~~~~~I~~N~i~ 226 (410)
T 2inu_A 158 -----HNGKTGIEVASDNDSFHITGMGFVYL-EHALIVRGADALRVNDNMIAE-----CGNCVELTGAGQATIVSGNHMG 226 (410)
T ss_dssp -----CCSCEEEEECSCEESCEEESCEEESC-SEEEEETTEESCEEESCEEES-----SSEEEEECSCEESCEEESCEEE
T ss_pred -----ccCceeEEEeccCCeEEEECCEEecc-cEEEEEccCCCcEEECCEEEe-----cCCceeeccccccceEecceee
Confidence 12345677775 88999999999986 679999999999999999995 257899987 789999999999
Q ss_pred cCCce--EEEccCccccccccCCCcccEEEEEEEE-eCCCceEEEccccCCcEEEEEEEeeEEeCCceeEEEEe
Q 013402 245 TGDDL--VAVKSGWDEYGIAYGHPSSGITIRRVTG-SSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKT 315 (443)
Q Consensus 245 ~gdD~--i~i~sg~~~~g~~~~~~~~ni~i~n~~~-~~~~~gi~igs~~~~~v~nI~i~n~~~~~~~~gi~i~s 315 (443)
.++|| |.+.. +.+.+|+++.+ .....||.+-. ..+..|+++++.+...|+.+..
T Consensus 227 ~~~dG~gIyl~n------------s~~~~I~~N~i~~~~R~gIh~m~-----s~~~~i~~N~f~~~~~Gi~~M~ 283 (410)
T 2inu_A 227 AGPDGVTLLAEN------------HEGLLVTGNNLFPRGRSLIEFTG-----CNRCSVTSNRLQGFYPGMLRLL 283 (410)
T ss_dssp CCTTSEEEEEES------------EESCEEESCEECSCSSEEEEEES-----CBSCEEESCEEEESSSCSEEEE
T ss_pred ecCCCCEEEEEe------------CCCCEEECCCcccCcceEEEEEc-----cCCCEEECCEEecceeEEEEEE
Confidence 98888 66654 78889998866 44578888742 3356788888888777876643
No 33
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=99.59 E-value=1.2e-13 Score=139.16 Aligned_cols=159 Identities=15% Similarity=0.101 Sum_probs=122.3
Q ss_pred EeecceEEEeE----EEecCC----Cc-eEEeeeeeeEEEEeEEEECCCCCCCCCeecccCCccEEEEeeEEecCCceEE
Q 013402 181 MNSRSIIISNV----IFQNSP----FW-NIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 251 (443)
Q Consensus 181 ~~~~nv~I~~v----~i~n~~----~~-~i~~~~~~~v~i~~~~I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~ 251 (443)
.+.+|++|.|- .+...+ .+ .+.+..|+|++|+++++.+.. .++ .+.+|.+. ..||+.
T Consensus 106 ~~~~nItI~G~Gg~~~iDG~G~~~~rp~~i~~~~~~Nv~I~gIti~n~w------~ih--~s~~V~i~------NtDGi~ 171 (464)
T 1h80_A 106 NIVRNFSFQGLGNGFLVDFKDSRDKNLAVFKLGDVRNYKISNFTIDDNK------TIF--ASILVDVT------ERNGRL 171 (464)
T ss_dssp SCEEEEEEEECTTCEEEECTTCSCCBEEEEEECSEEEEEEEEEEEECCS------CBS--CSEEECEE------EETTEE
T ss_pred cCccceEEECcCcceEEeCCCCCCCCceEEEEEeeccEEEeeeEEeccc------eEe--eceeeeee------cCCCce
Confidence 56788888876 333221 12 467889999999999999732 133 44444433 356776
Q ss_pred EccCccccccccCCCcccEEEEEEEEeCCCceEEEccccCCcEEEEEEEeeEEeCCceeEEEEee-----cCCCceEEEE
Q 013402 252 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTN-----IGRGGFIRNI 326 (443)
Q Consensus 252 i~sg~~~~g~~~~~~~~ni~i~n~~~~~~~~gi~igs~~~~~v~nI~i~n~~~~~~~~gi~i~s~-----~~~~g~v~nI 326 (443)
+. ++||+|+||++.++++++ |++....++||+|+||++.+ .+|++|+++ .+..|.++||
T Consensus 172 i~-------------s~nV~I~n~~I~~gddgi--Gs~~~~~~~NV~V~n~~~~g-g~GIrIktg~d~IG~~~~g~v~NI 235 (464)
T 1h80_A 172 HW-------------SRNGIIERIKQNNALFGY--GLIQTYGADNILFRNLHSEG-GIALRMETDNLLMKNYKQGGIRNI 235 (464)
T ss_dssp EE-------------EEEEEEEEEEEESCCTTC--EEEEESEEEEEEEEEEEEES-SEEEEEECCCHHHHHHTCCEEEEE
T ss_pred ee-------------ccCEEEeceEEecCCCeE--EecccCCEeEEEEEeeEEEC-CCEEEEEeCCceeccCCCCcEEEE
Confidence 62 799999999999987776 33444689999999999999 799999987 5567899999
Q ss_pred EEEeEEEcccCeeEEEEcccCCCCCCCCCCCCCCeEEeEEEEeEEEeccCeeEEEE
Q 013402 327 TVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQ 382 (443)
Q Consensus 327 ~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nIt~~nI~~~~~~~~~~i~ 382 (443)
+|+|++|+++.++|.|+.. . ..++||+|+||++++...++.|.
T Consensus 236 ~~~Ni~~~nv~~~I~I~p~------------~-~~isnItfeNI~~t~~~~aI~i~ 278 (464)
T 1h80_A 236 FADNIRCSKGLAAVMFGPH------------F-MKNGDVQVTNVSSVSCGSAVRSD 278 (464)
T ss_dssp EEEEEEEESSSEEEEEECT------------T-CBCCCEEEEEEEEESSSCSEEEC
T ss_pred EEEeEEEECCceeEEEeCC------------C-ceEeEEEEEEEEEEccceeEEEe
Confidence 9999999999999999831 1 26899999999999987777664
No 34
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=99.44 E-value=2e-11 Score=125.05 Aligned_cols=157 Identities=12% Similarity=0.056 Sum_probs=109.5
Q ss_pred eeeEEecCeeeeEEeccCcEEeCCCchhhhhhccCCCCCCCCeeEEEEeecceEEEeEEEecCCC-ceEEeee------e
Q 013402 134 MSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPF-WNIHPVY------C 206 (443)
Q Consensus 134 ~~~i~~~~~~nv~I~G~~G~idG~G~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i~n~~~-~~i~~~~------~ 206 (443)
..++.+.+++|++|.+. ++.-.+. +++.+.++.. .+++++. |
T Consensus 134 P~lI~f~~c~NV~I~gV--ti~NSp~-----------------------------~gI~I~~~~~NDGid~DGi~fd~~S 182 (609)
T 3gq8_A 134 ESNLSIRACHNVYIRDI--EAVDCTL-----------------------------HGIDITCGGLDYPYLGDGTTAPNPS 182 (609)
T ss_dssp TCSEEEESCEEEEEEEE--EEESCSS-----------------------------CSEEEECSSSSCCCCCTTCCCSSCC
T ss_pred ccEEEEEeeceEEEEee--EEEeCCC-----------------------------CCeEEeCCCCCccccCCCccccccc
Confidence 45788899999999995 4321110 1222222211 3344444 9
Q ss_pred eeEEEEeEEEECCCCCCCCCeecccCCccEEEEeeEEecC-----CceEEEccCccccccccCCCcccEEEEEEEEeCCC
Q 013402 207 SNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTG-----DDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 281 (443)
Q Consensus 207 ~~v~i~~~~I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~g-----dD~i~i~sg~~~~g~~~~~~~~ni~i~n~~~~~~~ 281 (443)
+||+|+||+|.+.. .|+|.+.+|+||+|+||++... .-||.+.++ ++||+|+||++.+..
T Consensus 183 ~NV~I~Nc~I~~tG----DDcIaIksseNI~I~Nc~~~gp~G~S~~~GIsIGsg-----------s~NVtV~Nc~i~nt~ 247 (609)
T 3gq8_A 183 ENIWIENCEATGFG----DDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDG-----------SRHVVLSNNRSKGCY 247 (609)
T ss_dssp EEEEEESCEEESCS----SCSEEECSCEEEEEESCEEECCSSCSSCCSEEECTT-----------CEEEEEESEEEESSS
T ss_pred eeEEEEeeEEEecC----CCEEEecCCeeEEEEeEEEECCCCCCCcccEEccCC-----------cccEEEEeeEEECCC
Confidence 99999999997643 6899999999999999999543 457777764 689999999999989
Q ss_pred ceEEEccccC-CcEEEEEEEeeEEeCCceeEEEEeecC------CCceEEEEEEEeEEEccc
Q 013402 282 SGIAVGSETS-GGVENVLAEHINLYNVGVGIHVKTNIG------RGGFIRNITVSDVYMENA 336 (443)
Q Consensus 282 ~gi~igs~~~-~~v~nI~i~n~~~~~~~~gi~i~s~~~------~~g~v~nI~~~ni~~~~~ 336 (443)
.|+.|++... +.++||+|+|+...+..+.+.+..... .....+||.+.|++....
T Consensus 248 ~GIrIKt~~~~~~v~NV~I~n~vs~~nvrsyn~r~iG~~~a~dp~s~~a~nV~l~n~~~~~p 309 (609)
T 3gq8_A 248 GGIEIKAHGDAPAAYNISINGHMSVEDVRSYNFRHIGHHAATAPQSVSAKNIVASNLVSIRP 309 (609)
T ss_dssp EEEEEEECTTSCCCEEEEEEEEEEESCSEEEEEEETTSCSTTSCCCSSCEEEEEEEEEEESC
T ss_pred CEEEEEecCCCCccccEEEECCEeecCceEecceEEccccCCCCCcceecceEeecceEEee
Confidence 9999997653 468999999986665544444432211 123578899999988654
No 35
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=99.43 E-value=3e-11 Score=125.69 Aligned_cols=157 Identities=12% Similarity=0.054 Sum_probs=106.6
Q ss_pred eeeEEecCeeeeEEeccCcEEeCCCchhhhhhccCCCCCCCCeeEEEEeecceEEEeEEEecCCC-ceEEeee------e
Q 013402 134 MSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPF-WNIHPVY------C 206 (443)
Q Consensus 134 ~~~i~~~~~~nv~I~G~~G~idG~G~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i~n~~~-~~i~~~~------~ 206 (443)
..++.+.+++|++|.+. ++.-.. . +++++.++.. .+++.+. |
T Consensus 134 P~lI~f~~ckNV~I~gV--ti~NSp--------------------------~---~gI~I~np~~NDGid~DGi~fdi~S 182 (772)
T 3gqn_A 134 ESNLSIRACHNVYIRDI--EAVDCT--------------------------L---HGIDITCGGLDYPYLGDGTTAPNPS 182 (772)
T ss_dssp TCSEEEESCEEEEEEEE--EEESCS--------------------------S---CSEEEECSSSSCCCCCTTCCCSSCC
T ss_pred ccEEEEEeeceEEEEeE--EEEeCC--------------------------C---CCEEEeCCCcCCcCCCcCccccccc
Confidence 35788899999999995 332111 0 1223332221 3444444 9
Q ss_pred eeEEEEeEEEECCCCCCCCCeecccCCccEEEEeeEEecC-----CceEEEccCccccccccCCCcccEEEEEEEEeCCC
Q 013402 207 SNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTG-----DDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 281 (443)
Q Consensus 207 ~~v~i~~~~I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~g-----dD~i~i~sg~~~~g~~~~~~~~ni~i~n~~~~~~~ 281 (443)
+||+|+||+|.+.. .|+|.+.+|+||+|+||++... .-||.+.++ ++||+|+||++.+..
T Consensus 183 ~NV~I~Nc~I~ntG----DDcIAIksSeNI~I~Nc~c~gphG~S~~~GIsIGsg-----------s~NVtV~Nc~~~nT~ 247 (772)
T 3gqn_A 183 ENIWIENCEATGFG----DDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDG-----------SRHVVLSNNRSKGCY 247 (772)
T ss_dssp EEEEEESCEEESCS----SCSEEECSCEEEEEESCEEECCSSSSSCCSEEECTT-----------CEEEEEEEEEEESSS
T ss_pred ceEEEEeeEEEecC----cCeEEecCCceEEEEeEEEECCCCCCCcccEEecCC-----------cccEEEEceEEECCC
Confidence 99999999997643 6899998899999999999543 457887764 689999999999989
Q ss_pred ceEEEccccC-CcEEEEEEEeeEEeCCceeEEEEeecC------CCceEEEEEEEeEEEccc
Q 013402 282 SGIAVGSETS-GGVENVLAEHINLYNVGVGIHVKTNIG------RGGFIRNITVSDVYMENA 336 (443)
Q Consensus 282 ~gi~igs~~~-~~v~nI~i~n~~~~~~~~gi~i~s~~~------~~g~v~nI~~~ni~~~~~ 336 (443)
.|+.|++... +.++||+|.++......+-..+..... ..-...||.+.|++....
T Consensus 248 nGIRIKt~~~gg~v~NV~I~gnis~~dvrsynir~iG~h~a~dp~s~~a~nV~l~n~~~~~P 309 (772)
T 3gqn_A 248 GGIEIKAHGDAPAAYNISINGHMSVEDVRSYNFRHIGHHAATAPQSVSAKNIVASNLVSIRP 309 (772)
T ss_dssp EEEEECCCTTSCCCEEEEEEEEEEESCSEEEEECCTTSCSSSSCCCSSCEEEEEEEEEEESC
T ss_pred cEEEEEEeCCCCccccEEEECCEEeccCeEecceEEccccCCCCCCccCccEEeecceEEcc
Confidence 9999997643 468999998766554333333322110 112468888888887654
No 36
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=99.40 E-value=3.8e-13 Score=137.00 Aligned_cols=178 Identities=12% Similarity=-0.004 Sum_probs=128.5
Q ss_pred eeEEEEeecceEEEeEEEecCC---Cc-----e-----EEeeeeeeEEEEeEEEECC-CCCCCCCeecc---cCCccEEE
Q 013402 176 NLIEFMNSRSIIISNVIFQNSP---FW-----N-----IHPVYCSNVVIRYVTILAP-ADSPNTDGIDP---DSSSNVCI 238 (443)
Q Consensus 176 ~~i~~~~~~nv~I~~v~i~n~~---~~-----~-----i~~~~~~~v~i~~~~I~~~-~~~~n~DGi~~---~~s~nv~I 238 (443)
.+|.+.+++|++|.|--..+.. .| . +.+..|+ |+++++.++ + ...+++ ..|+||+|
T Consensus 142 slI~~~~~~NItItG~GtIDGqG~~wW~~~~~~~~RP~l~f~~c~---I~GITi~NSDP----~w~I~iG~~~~c~NVtI 214 (600)
T 2x6w_A 142 DPASSGNLENCHIYGHGVVDFGGYEFGASSQLRNGVAFGRSYNCS---VTGITFQNGDV----TWAITLGWNGYGSNCYV 214 (600)
T ss_dssp SGGGCCCEEEEEEESSCEEECTTCCCSSTTCCEEEEECCSEEEEE---EESCEEESCCC----SCSEEECBTTBEEEEEE
T ss_pred ceEEEecceeEEEecceeeeCCccccccccccCCCCCEEEEeeeE---EeCeEEECCCC----ccEEEeCCCCCcccEEE
Confidence 3577888999999985444432 12 1 3456676 999999996 4 345888 88999999
Q ss_pred EeeE----EecCCceEEEccCccccccccCCCcccEEEEEEEEeCCCceEEE-ccccCCcEEEEEEEeeEEeCCceeEEE
Q 013402 239 EDSY----ISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV-GSETSGGVENVLAEHINLYNVGVGIHV 313 (443)
Q Consensus 239 ~n~~----i~~gdD~i~i~sg~~~~g~~~~~~~~ni~i~n~~~~~~~~gi~i-gs~~~~~v~nI~i~n~~~~~~~~gi~i 313 (443)
+|++ |.+ ....+| . |+|+||++.++++||+| ++... .++.++ ++....+||.|
T Consensus 215 ~nvtfi~aI~s---------spNTDG------I--V~I~nc~I~tGDDCIAI~KSGs~---~ni~~e--~~~~GHgGISI 272 (600)
T 2x6w_A 215 RKCRFINLVNS---------SVNADH------S--TVYVNCPYSGVESCYFSMSSSFA---RNIACS--VQLHQHDTFYR 272 (600)
T ss_dssp ESCEEECCCCC---------SSCCCE------E--EEEECSSSEEEESCEEECCCTTH---HHHEEE--EEECSSSEEEE
T ss_pred eCeEEcceEec---------CCCCCE------E--EEEEeeEEecCCcEEEEecCCCc---CCeEEE--EEcCCCCcEEe
Confidence 9999 544 222333 2 99999999999999999 98652 234555 55566569999
Q ss_pred EeecCCCceEEEEEEEeEEEcccCeeEEEEcccCCCCCCCCCCCCCCeEEeEEEEeEEEeccCeeEEEEe----cCCCCe
Q 013402 314 KTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQG----LKNSPF 389 (443)
Q Consensus 314 ~s~~~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nIt~~nI~~~~~~~~~~i~g----~~~~~i 389 (443)
+|.. .+.|+||+++| ++ +... + ..+.++||+|+||++.+...++.+.. .+..++
T Consensus 273 GSe~--~ggV~NV~V~N-rI---------Kt~~---------G-~GG~V~NItfeNI~m~nV~~~I~i~q~~~~~s~~~I 330 (600)
T 2x6w_A 273 GSTV--NGYCRGAYVVM-HA---------AEAA---------G-AGSYAYNMQVENNIAVIYGQFVILGSDVTATVSGHL 330 (600)
T ss_dssp SCEE--EEESEEEEEEE-CG---------GGCT---------T-TCSEEEEEEEESCEEEESSEEEEEEECBCSSCBCEE
T ss_pred cccc--cCcEEEEEEEE-EE---------Eeec---------C-CCceEEEEEEEEEEEEccceEEEeCCCCCCCCCceE
Confidence 8853 57799999999 22 2211 1 22589999999999999886666632 233579
Q ss_pred eeEEEEeEEEEeeCC
Q 013402 390 TGICLSNINLQGVAG 404 (443)
Q Consensus 390 ~ni~~~nv~~~~~~~ 404 (443)
+||+|+||+.+....
T Consensus 331 snItfkNItgTsas~ 345 (600)
T 2x6w_A 331 NDVIVSGNIVSIGER 345 (600)
T ss_dssp EEEEEESCEEEECSC
T ss_pred EEEEEEeEEEEeccc
Confidence 999999999998654
No 37
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=99.33 E-value=8.7e-11 Score=116.66 Aligned_cols=219 Identities=10% Similarity=0.061 Sum_probs=153.2
Q ss_pred cCeeeeEEeccCcEEeCCCchhhhhhccCCCCCCCCeeEEEEeec-ceEEEeEEEecCCCceEEeeeeeeEEEEeEEEEC
Q 013402 140 DGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSR-SIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILA 218 (443)
Q Consensus 140 ~~~~nv~I~G~~G~idG~G~~~~~~~~~~~~~~~~~~~i~~~~~~-nv~I~~v~i~n~~~~~i~~~~~~~v~i~~~~I~~ 218 (443)
.++++++|.|. ++.... ...|++..|. ++.+++..+.+...++|.+..|++++|++.++..
T Consensus 131 ~~~~nv~I~~~--~i~n~~----------------~~gi~~~~~~~~~~i~n~~~~~~~~dGI~~~~s~~~~i~~N~~~~ 192 (377)
T 2pyg_A 131 GADRDVTIERV--EVREMS----------------GYGFDPHEQTINLTIRDSVAHDNGLDGFVADYLVDSVFENNVAYA 192 (377)
T ss_dssp CCEEEEEEEEE--EEECCS----------------SCSEEECSSEEEEEEESCEEESCSSCSEEEESEEEEEEESCEEES
T ss_pred ccccceEEEeE--EEEecc----------------cceEEeecccCCeEEEeEEeecCCCCceeEeccCCcEEECcEEEc
Confidence 36789999985 443211 1247777765 7899999998888999999999999999998776
Q ss_pred CCCCCCCCeecccC-CccEEEEeeEEecCCceEEEcc-CccccccccCCCcccEEEEEEEEeCC-CceEEEccccCCcEE
Q 013402 219 PADSPNTDGIDPDS-SSNVCIEDSYISTGDDLVAVKS-GWDEYGIAYGHPSSGITIRRVTGSSP-FSGIAVGSETSGGVE 295 (443)
Q Consensus 219 ~~~~~n~DGi~~~~-s~nv~I~n~~i~~gdD~i~i~s-g~~~~g~~~~~~~~ni~i~n~~~~~~-~~gi~igs~~~~~v~ 295 (443)
+ ++|||++.. +++++|+|+.+...++++.+.. +.. ....++|++|+++++++. ..|+.+. .++
T Consensus 193 ~----~~~GI~~~~~s~~v~I~nN~i~~~~~g~~~~~~g~~-----~~~~s~nv~i~~N~~~~n~~~Gi~~~-----~~~ 258 (377)
T 2pyg_A 193 N----DRHGFNVVTSTHDFVMTNNVAYGNGSSGLVVQRGLE-----DLALPSNILIDGGAYYDNAREGVLLK-----MTS 258 (377)
T ss_dssp C----SSCSEEEETTCEEEEEESCEEESCSSCSEEEECCSS-----CCCCCEEEEEESCEEESCSSCSEEEE-----EEE
T ss_pred c----ccCcEEEEeccCCeEEECCEEECccCceEEEecccc-----CCCCCccEEEECCEEEcCccCceEec-----ccc
Confidence 4 489999877 9999999999999888877631 111 112379999999999875 7788875 478
Q ss_pred EEEEEeeEEeCC-ceeEEEEeecCCCceEEEEEEEeEEEcccCe----eEEEEcccCCCCCCCCCCCCCCeEEeEEEEeE
Q 013402 296 NVLAEHINLYNV-GVGIHVKTNIGRGGFIRNITVSDVYMENARK----GIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 370 (443)
Q Consensus 296 nI~i~n~~~~~~-~~gi~i~s~~~~~g~v~nI~~~ni~~~~~~~----~i~i~~~~~~~~~~~~~~~~~~~i~nIt~~nI 370 (443)
+++|+|+++.+. ..||+|+. .++++|+|+++.+... +..+.+.|...+.. . .....-++++|++.
T Consensus 259 ~v~i~~N~i~~~~~~GI~i~g-------~~~~~i~~N~i~~n~~~~~~~~v~~~~~~~~~~~-~--~~~~~~~~~~i~~N 328 (377)
T 2pyg_A 259 DITLQNADIHGNGSSGVRVYG-------AQDVQILDNQIHDNAQAAAVPEVLLQSFDDTAGA-S--GTYYTTLNTRIEGN 328 (377)
T ss_dssp EEEEESCEEESCSSCSEEEEE-------EEEEEEESCEEESCCSSSSCCSEEEECEEETTSS-S--CEEECCBCCEEESC
T ss_pred CeEEECCEEECCCCceEEEec-------CCCcEEECcEEECCcccccccceEEEEecCCCcc-c--eeeeeccCeEEECC
Confidence 999999999998 78999973 6899999999987643 22222223221100 0 00000245666666
Q ss_pred EEecc---CeeEEEEecCCCCeeeEEEEeEEEEeeC
Q 013402 371 WGTKV---QQSGLIQGLKNSPFTGICLSNINLQGVA 403 (443)
Q Consensus 371 ~~~~~---~~~~~i~g~~~~~i~ni~~~nv~~~~~~ 403 (443)
++++. ...+.+.+ ..+++++++|..+....
T Consensus 329 ~i~g~~~~~~~i~~~~---~~~~~~~i~~n~i~~~~ 361 (377)
T 2pyg_A 329 TISGSANSTYGIQERN---DGTDYSSLIDNDIAGVQ 361 (377)
T ss_dssp EEECCSSCCEEEEECS---SSCBCCEEESCEEESSS
T ss_pred EEECcCCCccceEEcc---CCCccEEEECcEEeCCc
Confidence 66552 23444433 45678888888887753
No 38
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=99.32 E-value=5.1e-11 Score=118.36 Aligned_cols=249 Identities=14% Similarity=0.130 Sum_probs=160.6
Q ss_pred CCCCceEEEeecccc-CCCcchhHH-HHHHHHHHhhhhccCCCeEEEECCCceE-------EEEeEec-cc-----cEEE
Q 013402 33 RYRNDKISITDFGGV-GDGKTLNTK-AFREAIYRIQHLRRSGGTLLYVPPGVYL-------TGSFNLT-SH-----MTLY 97 (443)
Q Consensus 33 ~~~~~~~nV~dyGa~-gDg~tddt~-aiq~Ai~~~~~~~~~gg~~V~ip~G~Y~-------~~~l~l~-s~-----~tl~ 97 (443)
.+.+.++.|..-|-. ++|.+.+.+ .||+|++.+ ++|.+|+|.+|+|. -..|.+. |+ ++|.
T Consensus 11 ~~~~~~~yVsp~Gsd~~~G~t~~~P~tiq~Ai~~a-----~pGdtI~l~~GtY~~~~~e~~~~~i~~~~sGt~~~pIti~ 85 (400)
T 1ru4_A 11 ISTKRIYYVAPNGNSSNNGSSFNAPMSFSAAMAAV-----NPGELILLKPGTYTIPYTQGKGNTITFNKSGKDGAPIYVA 85 (400)
T ss_dssp CCCSCEEEECTTCCTTCCSSSTTSCBCHHHHHHHC-----CTTCEEEECSEEEECCCBTTBCCCEEECCCCBTTBCEEEE
T ss_pred ccCccEEEEcCCCCCCCCCccccCCccHHHHHhhC-----CCCCEEEECCCeEccccccccceeEEecCCCCCCCCEEEE
Confidence 345668888665532 334232222 799999987 57899999999998 2445553 33 7777
Q ss_pred EccC--cEEEecCCCCC-CCCcCCCCCCCcccccCCCcceeeEEecCeeeeEEeccCcEEeCCCchhhhhhccCCCCCCC
Q 013402 98 LAKG--AVIKATQDTWN-WPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTR 174 (443)
Q Consensus 98 ~~~g--a~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~G~~G~idG~G~~~~~~~~~~~~~~~~ 174 (443)
...+ ++|. +..... +.. .. .. +.. ....++|.|. +|...+.
T Consensus 86 ~~~g~~~vI~-~~~~~g~~~~---------------~~-~~-i~i-~~~~~~i~gl--~I~n~g~--------------- 129 (400)
T 1ru4_A 86 AANCGRAVFD-FSFPDSQWVQ---------------AS-YG-FYV-TGDYWYFKGV--EVTRAGY--------------- 129 (400)
T ss_dssp EGGGCCEEEE-CCCCTTCCCT---------------TC-CS-EEE-CSSCEEEESE--EEESCSS---------------
T ss_pred EecCCCCEEe-CCccCCcccc---------------ce-eE-EEE-ECCeEEEEeE--EEEeCCC---------------
Confidence 6642 3443 221100 000 00 01 222 3456666665 4433321
Q ss_pred CeeEEEEeecceEEEeEEEecCCCceEEeeeee-eEEEEeEEEECCCC----CCCCCeecccCC--ccEEEEeeEEec-C
Q 013402 175 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCS-NVVIRYVTILAPAD----SPNTDGIDPDSS--SNVCIEDSYIST-G 246 (443)
Q Consensus 175 ~~~i~~~~~~nv~I~~v~i~n~~~~~i~~~~~~-~v~i~~~~I~~~~~----~~n~DGi~~~~s--~nv~I~n~~i~~-g 246 (443)
..|.+.. .+.+|+++++++...-+|.+.... +.+|++++|....+ +.+.|||.+..+ ++.+|++|.+.. .
T Consensus 130 -~GI~v~g-s~~~i~n~~i~~n~~~GI~l~~~~s~n~I~nn~i~~N~d~~~~g~~~dG~~~~~~~g~Gn~~~~~~~~~N~ 207 (400)
T 1ru4_A 130 -QGAYVIG-SHNTFENTAFHHNRNTGLEINNGGSYNTVINSDAYRNYDPKKNGSMADGFGPKQKQGPGNRFVGCRAWENS 207 (400)
T ss_dssp -CSEEECS-SSCEEESCEEESCSSCSEEECTTCCSCEEESCEEECCCCTTTTTSSCCSEEECTTCCSCCEEESCEEESCS
T ss_pred -CcEEEeC-CCcEEEeEEEECCCceeEEEEcccCCeEEEceEEEcccCccccCcccceEEEEecccCCeEEECCEEeecC
Confidence 1466665 788999999999877688887644 88899999988643 246789987643 788999999976 7
Q ss_pred CceEEEccCccccccccCCCcccEEEEEEEEeCC-------------CceEEEccccCCcEEEEEEEeeEEeCC-ceeEE
Q 013402 247 DDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP-------------FSGIAVGSETSGGVENVLAEHINLYNV-GVGIH 312 (443)
Q Consensus 247 dD~i~i~sg~~~~g~~~~~~~~ni~i~n~~~~~~-------------~~gi~igs~~~~~v~nI~i~n~~~~~~-~~gi~ 312 (443)
||++.+... ...++|+||..+.. +.|++++.+. ...+.+++||...+. .+|+.
T Consensus 208 ddGidl~~~-----------~~~v~i~nn~a~~Ng~~~~~~n~~~gngnGf~lgg~~--~~~~~~v~nn~a~~N~~~G~~ 274 (400)
T 1ru4_A 208 DDGFDLFDS-----------PQKVVIENSWAFRNGINYWNDSAFAGNGNGFKLGGNQ--AVGNHRITRSVAFGNVSKGFD 274 (400)
T ss_dssp SCSEECTTC-----------CSCCEEESCEEESTTCCCSCCTTCCCCCCSEECCCTT--CCCCCEEESCEEESCSSEEEE
T ss_pred CCcEEEEec-----------CCCEEEEeEEEECCccccccccccccCCCCEEEeccC--CcCCEEEEeeEEECCcCcCEe
Confidence 888888632 56689999987643 4578887653 345778999998865 36775
Q ss_pred EEeecCCCceEEEEEEEeEEEcccCeeEEEE
Q 013402 313 VKTNIGRGGFIRNITVSDVYMENARKGIKIA 343 (443)
Q Consensus 313 i~s~~~~~g~v~nI~~~ni~~~~~~~~i~i~ 343 (443)
....+ ..++|+|+++.+....+.+.
T Consensus 275 ~n~~~------~~~~i~nNt~~~N~~~~~~~ 299 (400)
T 1ru4_A 275 QNNNA------GGVTVINNTSYKNGINYGFG 299 (400)
T ss_dssp CTTCS------SCCEEESCEEESSSEEEEEC
T ss_pred ecCCC------CCEEEECeEEECCccceEEe
Confidence 53221 23678888887766676664
No 39
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=99.24 E-value=2.4e-10 Score=116.22 Aligned_cols=207 Identities=7% Similarity=0.014 Sum_probs=119.8
Q ss_pred HHHHHHHHHHhhhhccCCCeEEEECCCceEEEEeEe------ccccEEEEcc--CcEEEecCCCCCCCCcCCCCCCCccc
Q 013402 55 TKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNL------TSHMTLYLAK--GAVIKATQDTWNWPLIAPLPSYGRGR 126 (443)
Q Consensus 55 t~aiq~Ai~~~~~~~~~gg~~V~ip~G~Y~~~~l~l------~s~~tl~~~~--ga~l~~~~~~~~~~~~~~~~~~~~~~ 126 (443)
.+.||+||+.| ++|.+|++++|+|.-..+.+ ..+++|..+. .++|.+..
T Consensus 31 ~~~Lq~Ai~~A-----~pGDtI~L~~GtY~~~~i~i~~sGt~~~pItl~~~~~~~~vi~G~~------------------ 87 (506)
T 1dbg_A 31 NETLYQVVKEV-----KPGGLVQIADGTYKDVQLIVSNSGKSGLPITIKALNPGKVFFTGDA------------------ 87 (506)
T ss_dssp HHHHHHHHHHC-----CTTCEEEECSEEEETCEEEECCCCBTTBCEEEEESSTTSEEEEESC------------------
T ss_pred HHHHHHHHHhC-----CCCCEEEECCCEEecceEEEecCCcCCCCEEEECCCCCccEEeCCc------------------
Confidence 56899999987 68899999999997446776 4567776652 23343320
Q ss_pred ccCCCcceeeEEecCeeeeEEeccCcEEeCCCchhhhhhccCCCCCCCCeeEEEEeecceEEEeEEEecCCCc-eEEee-
Q 013402 127 ERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFW-NIHPV- 204 (443)
Q Consensus 127 ~~~~~~~~~~i~~~~~~nv~I~G~~G~idG~G~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i~n~~~~-~i~~~- 204 (443)
.+... .++++|.|. +|.+.+..-.. .....+..+.+. .++++|++++|.+...- .+.+.
T Consensus 88 ---------~l~i~-g~~v~i~GL--~i~~~~~~~~~------~~~~~~~~iav~-G~~~~I~nn~I~~~~~gd~i~i~~ 148 (506)
T 1dbg_A 88 ---------KVELR-GEHLILEGI--WFKDGNRAIQA------WKSHGPGLVAIY-GSYNRITACVFDCFDEANSAYITT 148 (506)
T ss_dssp ---------EEEEC-SSSEEEESC--EEEEECCCTTT------CCTTSCCSEEEC-SSSCEEESCEEESCCSSCSCSEEE
T ss_pred ---------eEEEE-cCCEEEECe--EEECCCcceee------eecccccceEEe-cCCeEEEeeEEEcCCCCceeeEee
Confidence 11211 255666665 55443321000 000012234444 58889999999886431 02222
Q ss_pred -------eeeeEEEEeEEEECCCCCCCCC----eecccC-------CccEEEEeeEEecCC------ceEEEccCccccc
Q 013402 205 -------YCSNVVIRYVTILAPADSPNTD----GIDPDS-------SSNVCIEDSYISTGD------DLVAVKSGWDEYG 260 (443)
Q Consensus 205 -------~~~~v~i~~~~I~~~~~~~n~D----Gi~~~~-------s~nv~I~n~~i~~gd------D~i~i~sg~~~~g 260 (443)
..++.+|++++|.+........ ||+++. +.+.+|+++.|...+ +.+.++.
T Consensus 149 ~~~~~~l~g~~n~I~~N~I~Gk~~~G~~i~gnngI~l~~~~~~~~~~~~~~I~nN~f~~~~~~~N~~e~iR~G~------ 222 (506)
T 1dbg_A 149 SLTEDGKVPQHCRIDHCSFTDKITFDQVINLNNTARAIKDGSVGGPGMYHRVDHCFFSNPQKPGNAGGGIRIGY------ 222 (506)
T ss_dssp CCCTTCCCCCSCEEESCEEECCCSSSCSEEECSSCCCSCCCSCCCCCCCCEEESCEEEECCCSSSCCCSEEECS------
T ss_pred cccceeeeccccEEECcEEECCcCcceEEecCceeEeccCcccccccCCeEEeCcEEcccccCCCccccEEEEE------
Confidence 5667789999999854322233 787775 368999999998642 2333331
Q ss_pred cccCCCcccEEEEEEEEeCCCceEEEccccCCcEEEEEEEeeEEeCCceeEEEE
Q 013402 261 IAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVK 314 (443)
Q Consensus 261 ~~~~~~~~ni~i~n~~~~~~~~gi~igs~~~~~v~nI~i~n~~~~~~~~gi~i~ 314 (443)
..+.+.+.+|++++|...+.+.+|-+.. ..+.+|+++++.++..+|.+.
T Consensus 223 --h~m~s~~~~VenN~f~~~~gg~aim~sk---S~~n~i~~N~~~~~~ggi~l~ 271 (506)
T 1dbg_A 223 --YRNDIGRCLVDSNLFMRQDSEAEIITSK---SQENVYYGNTYLNCQGTMNFR 271 (506)
T ss_dssp --STTCBCCCEEESCEEEEECSSSEEEEEE---SBSCEEESCEEESCSSEEEEE
T ss_pred --EecccCCcEEECCEEEeccCcEEEEEEe---cCCEEEECCEEEcccCcEEEe
Confidence 1133678888888887654444332211 113466666666665555444
No 40
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=99.23 E-value=6.1e-11 Score=123.43 Aligned_cols=70 Identities=21% Similarity=0.382 Sum_probs=61.8
Q ss_pred CCCceEEEeeccccCCCcchhHHHHHHHHHHhhhhccCCCeEEEECCCceEEE-EeEeccccEEEEccCcEEEecC
Q 013402 34 YRNDKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTG-SFNLTSHMTLYLAKGAVIKATQ 108 (443)
Q Consensus 34 ~~~~~~nV~dyGa~gDg~tddt~aiq~Ai~~~~~~~~~gg~~V~ip~G~Y~~~-~l~l~s~~tl~~~~ga~l~~~~ 108 (443)
+....++|+||||+|||++|||+|||+||+++ .++.+||||+|+|++. +|.++++++|.++.-.+|....
T Consensus 396 ~~~~~vnVkd~GA~GDG~tDDT~Ai~~al~aa-----~~g~~v~~P~G~Y~vt~Ti~ip~~~~ivG~~~~~I~~~G 466 (758)
T 3eqn_A 396 APSDFVSVRSQGAKGDGHTDDTQAIKNVFAKY-----AGCKIIFFDAGTYIVTDTIQIPAGTQIVGEVWSVIMGTG 466 (758)
T ss_dssp CGGGEEETTTTTCCCEEEEECHHHHHHHHHHH-----TTTSEEECCSEEEEESSCEEECTTCEEECCSSEEEEECS
T ss_pred cccceEEeeeccccCCCCchhHHHHHHHHHHh-----cCCCEEEECCCEeEECCeEEcCCCCEEEecccceEecCC
Confidence 33468999999999999999999999999965 5788999999999987 8999999999988777777654
No 41
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=98.71 E-value=5.3e-07 Score=87.71 Aligned_cols=84 Identities=26% Similarity=0.199 Sum_probs=53.7
Q ss_pred CCCeecccCCccEEEEeeEEecC---CceEEEccCcc---cccc-ccCCCcccEEEEEEEEeCCCceEEEccccCC----
Q 013402 224 NTDGIDPDSSSNVCIEDSYISTG---DDLVAVKSGWD---EYGI-AYGHPSSGITIRRVTGSSPFSGIAVGSETSG---- 292 (443)
Q Consensus 224 n~DGi~~~~s~nv~I~n~~i~~g---dD~i~i~sg~~---~~g~-~~~~~~~ni~i~n~~~~~~~~gi~igs~~~~---- 292 (443)
..|+|.+..++||.|++|.|..+ |++.....|+. .+|+ .....+.+|+|++|+|..-..+.-+|+....
T Consensus 132 ~~DaI~i~~s~nVWIDH~s~s~~~~~d~~~~~~~G~~~~~~Dgl~Di~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d 211 (355)
T 1pcl_A 132 EWDAAVIDNSTNVWVDHVTISDGSFTDDKYTTKDGEKYVQHDGALDIKKGSDYVTISYSRFELHDKTILIGHSDSNGSQD 211 (355)
T ss_pred cCceEEecCCCcEEEEeeEEeccccCccccccccCccccccccceeeecCCCcEEEEeeEEcCCCceEEeCCCCCCcccc
Confidence 46889998899999999999863 22222221211 0110 1122488999999999876666667765321
Q ss_pred -cEEEEEEEeeEEeCC
Q 013402 293 -GVENVLAEHINLYNV 307 (443)
Q Consensus 293 -~v~nI~i~n~~~~~~ 307 (443)
+..+|+|.++.+.+.
T Consensus 212 ~g~~~vT~hhN~f~~~ 227 (355)
T 1pcl_A 212 SGKLRVTFHNNVFDRV 227 (355)
T ss_pred cCcceEEEECcEEeCC
Confidence 234799999988765
No 42
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=98.71 E-value=1e-06 Score=84.76 Aligned_cols=73 Identities=23% Similarity=0.182 Sum_probs=43.2
Q ss_pred CCCeecccCCccEEEEeeEEecCCc-eEEEccCccccccccCCCcccEEEEEEEEeCCCceEEEccccCC------cEEE
Q 013402 224 NTDGIDPDSSSNVCIEDSYISTGDD-LVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSG------GVEN 296 (443)
Q Consensus 224 n~DGi~~~~s~nv~I~n~~i~~gdD-~i~i~sg~~~~g~~~~~~~~ni~i~n~~~~~~~~gi~igs~~~~------~v~n 296 (443)
..|+|.+..++||.|++|.+..+.| .+.++.+ +.+|+|++|+|..-..+.-+|+.... +-.+
T Consensus 115 ~~DaI~i~~s~nVWIDHcs~s~~~Dg~idi~~~-----------s~~vTISnn~f~~h~k~~LiG~sd~~~~~~d~g~~~ 183 (340)
T 3zsc_A 115 DFDYINVENSHHIWIDHITFVNGNDGAVDIKKY-----------SNYITVSWNKFVDHDKVSLVGSSDKEDPEQAGQAYK 183 (340)
T ss_dssp CCCSEEEESCEEEEEESCEEESCSSCSEEEETT-----------CEEEEEESCEEESCSBCCEECCCTTSCHHHHHHSCE
T ss_pred CCCeEEEecCCcEEEEeeeeccCCccceEEecC-----------CceEEEECcEeccCceeeEeCcCCCCccccccCCcE
Confidence 4567777777777777777766333 3555543 56777777777665555555543221 1235
Q ss_pred EEEEeeEEeCC
Q 013402 297 VLAEHINLYNV 307 (443)
Q Consensus 297 I~i~n~~~~~~ 307 (443)
|++.++.+.+.
T Consensus 184 vT~hhN~f~~~ 194 (340)
T 3zsc_A 184 VTYHHNYFKNL 194 (340)
T ss_dssp EEEESCEEESC
T ss_pred EEEECeEecCC
Confidence 66777666553
No 43
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=98.66 E-value=3e-07 Score=89.28 Aligned_cols=139 Identities=17% Similarity=0.098 Sum_probs=82.3
Q ss_pred EEEEeecceEEEeEEEecCC-CceEEe-eeeeeEEEEeEEEECCCCCCCCCeecccCCccEEEEeeEEecCCceE-EEcc
Q 013402 178 IEFMNSRSIIISNVIFQNSP-FWNIHP-VYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLV-AVKS 254 (443)
Q Consensus 178 i~~~~~~nv~I~~v~i~n~~-~~~i~~-~~~~~v~i~~~~I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gdD~i-~i~s 254 (443)
|.+..++||.|++++|++.. .+.-.+ ..... +.-.. .....|||.+..+++|.|++|.|..+.|++ .++.
T Consensus 108 i~i~~a~NVIIrnl~i~~~~~~~~~~I~~~~~~----~~g~~---~~~~~DaI~i~~s~nVwIDHcs~s~~~Dg~id~~~ 180 (346)
T 1pxz_A 108 LFMRKVSHVILHSLHIHGCNTSVLGDVLVSESI----GVEPV---HAQDGDAITMRNVTNAWIDHNSLSDCSDGLIDVTL 180 (346)
T ss_dssp EEEESCEEEEEESCEEECCCCCCSEEEEEETTT----EEEEE---CCCCCCSEEEESCEEEEEESCEEECCSSEEEEEES
T ss_pred EEEEccCCEEEEeeEEEeeccCCCceEEeccCc----ccccc---cCCCCCEEEEecCceEEEEeeEEecCCCCcEeecc
Confidence 56667888888888887752 111000 00000 00000 123578888888899999999998877765 4543
Q ss_pred CccccccccCCCcccEEEEEEEEeCCCceEEEccccC---CcEEEEEEEeeEE-eCCc-eeEEEEeecCCCceEEEEEEE
Q 013402 255 GWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS---GGVENVLAEHINL-YNVG-VGIHVKTNIGRGGFIRNITVS 329 (443)
Q Consensus 255 g~~~~g~~~~~~~~ni~i~n~~~~~~~~gi~igs~~~---~~v~nI~i~n~~~-~~~~-~gi~i~s~~~~~g~v~nI~~~ 329 (443)
+ +.+|+|++|+|..-..++-+|+... ....+|++.++.+ .+.. +.-+++ . ..+++.
T Consensus 181 ~-----------s~~vTISnn~f~~H~k~~l~G~sd~~~~d~~~~vT~~~N~f~~~~~~R~Pr~r-----~---g~~hv~ 241 (346)
T 1pxz_A 181 G-----------STGITISNNHFFNHHKVMLLGHDDTYDDDKSMKVTVAFNQFGPNAGQRMPRAR-----Y---GLVHVA 241 (346)
T ss_dssp S-----------CEEEEEESCEEESEEEEEEESCCSSCGGGGGCEEEEESCEECSSEEECTTEEE-----S---SEEEEE
T ss_pred C-----------cceEEEEeeEEecCCceeEECCCCccccCCceEEEEEeeEEeCCccccCccEe-----c---ceEEEE
Confidence 3 7889999999886555777776432 1234788888888 5432 222222 1 245677
Q ss_pred eEEEcccC-eeEEE
Q 013402 330 DVYMENAR-KGIKI 342 (443)
Q Consensus 330 ni~~~~~~-~~i~i 342 (443)
|+.+.+.. +++..
T Consensus 242 NN~~~~~~~~~i~~ 255 (346)
T 1pxz_A 242 NNNYDPWNIYAIGG 255 (346)
T ss_dssp SCEECCCSSCSEEE
T ss_pred eeEEEcccceEEec
Confidence 77766643 45443
No 44
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=98.65 E-value=3.9e-07 Score=88.03 Aligned_cols=72 Identities=14% Similarity=0.121 Sum_probs=39.0
Q ss_pred CCCeeccc-----CCccEEEEeeEEecC------------CceEEEccCccccccccCCCcccEEEEEEEEeCCCceEEE
Q 013402 224 NTDGIDPD-----SSSNVCIEDSYISTG------------DDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 286 (443)
Q Consensus 224 n~DGi~~~-----~s~nv~I~n~~i~~g------------dD~i~i~sg~~~~g~~~~~~~~ni~i~n~~~~~~~~gi~i 286 (443)
..|+|.+. .++||.|++|.+..+ |..+.++. ++.+|+|++|+|..-..++-+
T Consensus 112 ~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~~~~~~~~Dg~idi~~-----------~s~~VTISnn~f~~h~k~~L~ 180 (330)
T 2qy1_A 112 DADSISLEGNSSGEPSKIWVDHNTVFASLTKCSGAGDASFDGGIDMKK-----------GVHHVTVSYNYVYNYQKVALN 180 (330)
T ss_dssp GCCSEEEECBTTBCCEEEEEESCEEECCCCCCTTCTTCSSCCSEEEES-----------SCEEEEEESCEEEEEEECCEE
T ss_pred CCcceeeccccCcccccEEEEeEEEEccccccccCCcceeeccccccc-----------CcceEEEEcceeccCCeEEEE
Confidence 35666665 366666666666432 22233333 267777777777654444455
Q ss_pred ccccCC---cEEEEEEEeeEEeC
Q 013402 287 GSETSG---GVENVLAEHINLYN 306 (443)
Q Consensus 287 gs~~~~---~v~nI~i~n~~~~~ 306 (443)
|+.... ...+|+|.++.+.+
T Consensus 181 G~sd~~~~~~~~~vT~h~N~f~~ 203 (330)
T 2qy1_A 181 GYSDSDTKNSAARTTYHHNRFEN 203 (330)
T ss_dssp SSSTTCGGGGGCEEEEESCEEEE
T ss_pred CCCCccccCCCceEEEECcEEcC
Confidence 543211 11366777776654
No 45
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=98.64 E-value=4.4e-07 Score=88.39 Aligned_cols=88 Identities=13% Similarity=0.115 Sum_probs=51.7
Q ss_pred eeeeEEEEeEEEECC--CCCCCCCeecccCCccEEEEeeEEec-CCceEEEccCccccccccCCCcccEEEEEEEEeCCC
Q 013402 205 YCSNVVIRYVTILAP--ADSPNTDGIDPDSSSNVCIEDSYIST-GDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 281 (443)
Q Consensus 205 ~~~~v~i~~~~I~~~--~~~~n~DGi~~~~s~nv~I~n~~i~~-gdD~i~i~sg~~~~g~~~~~~~~ni~i~n~~~~~~~ 281 (443)
.++||.|+|++|+.. ...+..|+|.+..+++|.|++|.+.. +|..+.... ..+.+|+|++|+|.+..
T Consensus 131 ~a~NVIIrnL~i~~~~~~~~~g~DaI~i~~s~nVwIDHcs~s~~~d~~~~~g~----------~~s~~VTISnn~f~~~~ 200 (359)
T 1idk_A 131 GAENIIIQNIAVTDINPKYVWGGDAITLDDCDLVWIDHVTTARIGRQHYVLGT----------SADNRVSLTNNYIDGVS 200 (359)
T ss_dssp TCEEEEEESCEEEEECTTEETSCCSEEECSCEEEEEESCEEEEESSCSEEECC----------CTTCEEEEESCEEECBC
T ss_pred CCCcEEEeCeEEEcccccccccCCceeecCCCcEEEEeeEeecCCCCcEEecc----------cCcceEEEECcEecCCc
Confidence 345555555555541 11234678888888888888888876 555454311 12678888888886421
Q ss_pred ------------ceEEEccccCCcEEEEEEEeeEEeCC
Q 013402 282 ------------SGIAVGSETSGGVENVLAEHINLYNV 307 (443)
Q Consensus 282 ------------~gi~igs~~~~~v~nI~i~n~~~~~~ 307 (443)
.++-+|+ ..+|+|.++.+.+.
T Consensus 201 ~~s~~~~G~h~~~~~L~G~-----sd~vT~hhN~f~~~ 233 (359)
T 1idk_A 201 DYSATCDGYHYWAIYLDGD-----ADLVTMKGNYIYHT 233 (359)
T ss_dssp SCBTTSSSBBSCCEEECCS-----SCEEEEESCEEESB
T ss_pred ccccccCccccceEEEEec-----CCCeEEEceEeecC
Confidence 1222232 12778888877754
No 46
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=98.57 E-value=1.3e-06 Score=85.12 Aligned_cols=45 Identities=20% Similarity=0.231 Sum_probs=25.9
Q ss_pred CCeecccCCccEEEEeeEEec-CCceEEEccCccccccccCCCcccEEEEEEEEeC
Q 013402 225 TDGIDPDSSSNVCIEDSYIST-GDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS 279 (443)
Q Consensus 225 ~DGi~~~~s~nv~I~n~~i~~-gdD~i~i~sg~~~~g~~~~~~~~ni~i~n~~~~~ 279 (443)
.|+|.+..+++|.|++|.+.. +|..+.... ..+.+|+|++|+|.+
T Consensus 153 ~DaI~i~~s~nvwIDHcs~s~~~d~~~~~~~----------~~s~~vTISnn~f~~ 198 (359)
T 1qcx_A 153 GDAITVDDSDLVWIDHVTTARIGRQHIVLGT----------SADNRVTISYSLIDG 198 (359)
T ss_dssp CCSEEEESCCCEEEESCEEEEESSCSEEECS----------SCCEEEEEESCEEEC
T ss_pred CceeEecCCceEEEEeeEeeccCcCceeecc----------cccccEEEECcEecC
Confidence 466776667777777777765 333332110 125677777777753
No 47
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=98.44 E-value=4.3e-06 Score=81.45 Aligned_cols=42 Identities=19% Similarity=0.309 Sum_probs=28.1
Q ss_pred hhHHHHHHHHHHhhhhccCCC--eEEEECCCceEEEEeEe-ccccEEEEc
Q 013402 53 LNTKAFREAIYRIQHLRRSGG--TLLYVPPGVYLTGSFNL-TSHMTLYLA 99 (443)
Q Consensus 53 ddt~aiq~Ai~~~~~~~~~gg--~~V~ip~G~Y~~~~l~l-~s~~tl~~~ 99 (443)
-+-..||+||+++. .+. .+|+|+||+|.- .+.+ +.+++|.++
T Consensus 42 g~f~TIq~Ai~aa~----~~~~~~~I~I~~G~Y~E-~v~I~k~~itl~G~ 86 (364)
T 3uw0_A 42 DEFSSINAALKSAP----KDDTPFIIFLKNGVYTE-RLEVARSHVTLKGE 86 (364)
T ss_dssp --CCCHHHHHHHSC----SSSSCEEEEECSEEECC-CEEECSTTEEEEES
T ss_pred CCcccHHHHHhhcc----cCCCcEEEEEeCCEEEE-EEEEcCCeEEEEec
Confidence 34568999999984 221 399999999973 3444 345777665
No 48
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=98.44 E-value=1e-05 Score=77.48 Aligned_cols=62 Identities=16% Similarity=0.171 Sum_probs=36.7
Q ss_pred eecceEEEeEEEecCCC------ceEEeeeeeeEEEEeEEEECCCCCCCCCeecccCCccEEEEeeEEecCCceE
Q 013402 182 NSRSIIISNVIFQNSPF------WNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLV 250 (443)
Q Consensus 182 ~~~nv~I~~v~i~n~~~------~~i~~~~~~~v~i~~~~I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gdD~i 250 (443)
.++++++++++|+|... -.+.+ .++++.|++|+|... .|++.....+ ..+++|.|...-|-|
T Consensus 92 ~a~~f~~~nlt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g~-----QDTLy~~~~r-~~~~~c~I~G~vDFI 159 (319)
T 1gq8_A 92 VGAGFLARDITFQNTAGAAKHQAVALRV-GSDLSAFYRCDILAY-----QDSLYVHSNR-QFFINCFIAGTVDFI 159 (319)
T ss_dssp CSTTCEEEEEEEEECCCGGGCCCCSEEE-CCTTEEEEEEEEECS-----TTCEEECSSE-EEEESCEEEESSSCE
T ss_pred ECCCEEEEEeEeEccCCCcCCceEEEEe-cCCcEEEEEeEECcc-----ceeeeecCcc-EEEEecEEEeeeeEE
Confidence 37788899999988642 12333 456666666666652 3555554433 366666666544433
No 49
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=98.40 E-value=1.8e-06 Score=83.74 Aligned_cols=132 Identities=15% Similarity=0.066 Sum_probs=83.9
Q ss_pred ecceEEEeE----EEecCCCceEEeeeeeeEEEEeEEEECCCCCCCCCe-ecccCCccEEEEeeEEecCCceEEEccCcc
Q 013402 183 SRSIIISNV----IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDG-IDPDSSSNVCIEDSYISTGDDLVAVKSGWD 257 (443)
Q Consensus 183 ~~nv~I~~v----~i~n~~~~~i~~~~~~~v~i~~~~I~~~~~~~n~DG-i~~~~s~nv~I~n~~i~~gdD~i~i~sg~~ 257 (443)
.++++|.|. .|.. ..+++.+..++||.|++++|+...... .+ |.-..-.+. ...-...+|+|.+..
T Consensus 87 ~sn~TI~G~ga~~~i~G-~G~gi~i~~a~NVIIrnl~i~~~~~~~--~~~I~~~~~~~~---g~~~~~~~DaI~i~~--- 157 (346)
T 1pxz_A 87 AGHKTIDGRGADVHLGN-GGPCLFMRKVSHVILHSLHIHGCNTSV--LGDVLVSESIGV---EPVHAQDGDAITMRN--- 157 (346)
T ss_dssp CSSEEEECTTSCEEEET-TSCCEEEESCEEEEEESCEEECCCCCC--SEEEEEETTTEE---EEECCCCCCSEEEES---
T ss_pred cCCeEEEccCCceEEeC-CcceEEEEccCCEEEEeeEEEeeccCC--CceEEeccCccc---ccccCCCCCEEEEec---
Confidence 457888874 2221 146788889999999999998742111 11 100000000 011124678898875
Q ss_pred ccccccCCCcccEEEEEEEEeCCCceE-EEccccCCcEEEEEEEeeEEeCCceeEEEEeecCCC-ceEEEEEEEeEEE-c
Q 013402 258 EYGIAYGHPSSGITIRRVTGSSPFSGI-AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG-GFIRNITVSDVYM-E 334 (443)
Q Consensus 258 ~~g~~~~~~~~ni~i~n~~~~~~~~gi-~igs~~~~~v~nI~i~n~~~~~~~~gi~i~s~~~~~-g~v~nI~~~ni~~-~ 334 (443)
++||.|++|.+....+|+ .+. ....+|+|+||.|.+...++.+.+.+... ....+|+|.++.+ .
T Consensus 158 ---------s~nVwIDHcs~s~~~Dg~id~~----~~s~~vTISnn~f~~H~k~~l~G~sd~~~~d~~~~vT~~~N~f~~ 224 (346)
T 1pxz_A 158 ---------VTNAWIDHNSLSDCSDGLIDVT----LGSTGITISNNHFFNHHKVMLLGHDDTYDDDKSMKVTVAFNQFGP 224 (346)
T ss_dssp ---------CEEEEEESCEEECCSSEEEEEE----SSCEEEEEESCEEESEEEEEEESCCSSCGGGGGCEEEEESCEECS
T ss_pred ---------CceEEEEeeEEecCCCCcEeec----cCcceEEEEeeEEecCCceeEECCCCccccCCceEEEEEeeEEeC
Confidence 799999999999886776 453 24679999999999876777776543211 1124788888888 5
Q ss_pred cc
Q 013402 335 NA 336 (443)
Q Consensus 335 ~~ 336 (443)
+.
T Consensus 225 ~~ 226 (346)
T 1pxz_A 225 NA 226 (346)
T ss_dssp SE
T ss_pred Cc
Confidence 54
No 50
>2x3h_A K5 lyase, K5A lyase; bacteriophage, glycosaminoglycan; 1.60A {Enterobacteria phage k1-5}
Probab=98.40 E-value=0.00013 Score=67.32 Aligned_cols=174 Identities=17% Similarity=0.198 Sum_probs=118.8
Q ss_pred ceEEEeeccccCCCcchhHHHHHHHHHHhhhhccCCCeEEEECCCceEEEEeEeccccEEEEccCcEEEecCCCCCCCCc
Q 013402 37 DKISITDFGGVGDGKTLNTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLI 116 (443)
Q Consensus 37 ~~~nV~dyGa~gDg~tddt~aiq~Ai~~~~~~~~~gg~~V~ip~G~Y~~~~l~l~s~~tl~~~~ga~l~~~~~~~~~~~~ 116 (443)
+++.+++|||.+|-.+||+++|.+.+.. -.-|++|.|.|..+.+.+ +...|+...+++|.--.....|...
T Consensus 63 rvls~k~fga~~~~~~d~~~~~~~sl~s--------~~~v~i~~gvf~ss~i~~-~~c~l~g~g~g~~~~~~~~gn~lvf 133 (542)
T 2x3h_A 63 RVLTSKPFGAAGDATTDDTEVIAASLNS--------QKAVTISDGVFSSSGINS-NYCNLDGRGSGVLSHRSSTGNYLVF 133 (542)
T ss_dssp HBCBSSCTTCCCBSSSCCHHHHHHHHTS--------SSCEECCSEEEEECCEEE-SCCEEECTTTEEEEECSSSSCCEEE
T ss_pred eeeecccccccCCcccCcHHHHHhhhcc--------cccEeccccccccccccc-ccccccccCCceeeeecCCCCEEEE
Confidence 4678999999999999999999998874 336999999997665554 4778999999999865444443321
Q ss_pred CCCCCCCcccccCCCcceeeEEecCeeeeEEeccCcEEeCCCchhhhhhccCCCCCCCCeeEEEEeecceEEEeEEEecC
Q 013402 117 APLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNS 196 (443)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~G~~G~idG~G~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i~n~ 196 (443)
+- -..-...+++|.|. - ..+....+.+.|.+..+|+++++.|.|.
T Consensus 134 n~------------------p~~g~ls~~ti~~n-------k----------~~ds~qg~qvs~~gg~dvsv~~i~fsn~ 178 (542)
T 2x3h_A 134 NN------------------PRTGRLSNITVESN-------K----------ATDTTQGQQVSLAGGSDVTVSDVNFSNV 178 (542)
T ss_dssp ES------------------CEEEEEEEEEEECC-------C----------SSTTCBCCSEEEESCEEEEEEEEEEEEE
T ss_pred eC------------------CCCcceeeEEEecc-------c----------CCccccceEEEecCCCcceEeeeeeeec
Confidence 10 00112466777773 1 1123445669999999999999999887
Q ss_pred CCceEEeee------eeeEEEEeEEEECCCCCCCC-Cee-cccCCccEEEEeeEEec--CCceEEEcc
Q 013402 197 PFWNIHPVY------CSNVVIRYVTILAPADSPNT-DGI-DPDSSSNVCIEDSYIST--GDDLVAVKS 254 (443)
Q Consensus 197 ~~~~i~~~~------~~~v~i~~~~I~~~~~~~n~-DGi-~~~~s~nv~I~n~~i~~--gdD~i~i~s 254 (443)
..-++.+.. -+...|++++=.-..+..|. -|. -++++.|.+|++..-++ .-.++.+|.
T Consensus 179 ~g~gfsliayp~~~~p~g~~i~~irg~y~g~a~nk~agcvl~dss~nslid~via~nypqfgavelk~ 246 (542)
T 2x3h_A 179 KGTGFSLIAYPNDAPPDGLMIKGIRGSYSGYATNKAAGCVLADSSVNSLIDNVIAKNYPQFGAVELKG 246 (542)
T ss_dssp CSBEEEEEEECSSSCCBSCEEEEEEEEECSCCTTCSEEEEEEESCBSCEEEEEEEESCCTTEEEEEET
T ss_pred CCCceeEEEcCCCCCCCceEEeccccceeccccccccceEEeccchhhhhhhhhhhcCCccceEEeec
Confidence 665554432 24556777766554444332 233 34678899999998888 455677775
No 51
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=98.40 E-value=9.3e-06 Score=78.15 Aligned_cols=166 Identities=15% Similarity=0.076 Sum_probs=111.4
Q ss_pred eeEEeccCcEEeCCCchhhhhhccCCCCCCCCeeEEEEeecceEEEeEEEecC-----------CCceEEeeeeeeEEEE
Q 013402 144 DVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNS-----------PFWNIHPVYCSNVVIR 212 (443)
Q Consensus 144 nv~I~G~~G~idG~G~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i~n~-----------~~~~i~~~~~~~v~i~ 212 (443)
.+.| +.+-||+|++.. -- ....|.+.+++||.|++++|++. ....|.+..+++|.|+
T Consensus 63 ~l~v-~snkTI~G~ga~-~I----------~G~Gi~I~~a~NVIIrnl~i~~~~~~~~~~~~~~~~DaI~i~~s~nVWID 130 (340)
T 3zsc_A 63 EIKV-LSDKTIVGINDA-KI----------VGGGLVIKDAQNVIIRNIHFEGFYMEDDPRGKKYDFDYINVENSHHIWID 130 (340)
T ss_dssp EEEE-CSSEEEEEEEEE-EE----------EEEEEEEESCEEEEEESCEEECCCCTTCTTSCSSCCCSEEEESCEEEEEE
T ss_pred eEEe-cCCCEEEeccCc-EE----------ecCceEEEcCceEEEeCeEEECCccccCccCCcCCCCeEEEecCCcEEEE
Confidence 5777 445899998864 10 12358888999999999999985 3467999999999999
Q ss_pred eEEEECCCCCCCCCe-eccc-CCccEEEEeeEEecCCceEEEccCccccccccCCCcccEEEEEEEEeCC-CceEEEccc
Q 013402 213 YVTILAPADSPNTDG-IDPD-SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP-FSGIAVGSE 289 (443)
Q Consensus 213 ~~~I~~~~~~~n~DG-i~~~-~s~nv~I~n~~i~~gdD~i~i~sg~~~~g~~~~~~~~ni~i~n~~~~~~-~~gi~igs~ 289 (443)
+|++... .|| +++. .+++|+|+||.|...+-+.-+++. +..+........+|++.+|+|.+. .+.-++..
T Consensus 131 Hcs~s~~-----~Dg~idi~~~s~~vTISnn~f~~h~k~~LiG~s-d~~~~~~d~g~~~vT~hhN~f~~~~~R~Pr~r~- 203 (340)
T 3zsc_A 131 HITFVNG-----NDGAVDIKKYSNYITVSWNKFVDHDKVSLVGSS-DKEDPEQAGQAYKVTYHHNYFKNLIQRMPRIRF- 203 (340)
T ss_dssp SCEEESC-----SSCSEEEETTCEEEEEESCEEESCSBCCEECCC-TTSCHHHHHHSCEEEEESCEEESCCBCTTEEES-
T ss_pred eeeeccC-----CccceEEecCCceEEEECcEeccCceeeEeCcC-CCCccccccCCcEEEEECeEecCCCCCCCcccC-
Confidence 9999974 466 5665 589999999999986555544442 111000000124899999999764 33333321
Q ss_pred cCCcEEEEEEEeeEEeCC---------ceeEEEEeecCCCceEEEEEEEeEEEcccCe
Q 013402 290 TSGGVENVLAEHINLYNV---------GVGIHVKTNIGRGGFIRNITVSDVYMENARK 338 (443)
Q Consensus 290 ~~~~v~nI~i~n~~~~~~---------~~gi~i~s~~~~~g~v~nI~~~ni~~~~~~~ 338 (443)
+ .+.+.|+.+.+. -.+-.+....+ ..|.+|++.+++...
T Consensus 204 ---G--~~Hv~NN~~~n~~~~~~~~~~~~~yai~~~~~-----a~i~~E~N~F~~~~~ 251 (340)
T 3zsc_A 204 ---G--MAHVFNNFYSMGLRTGVSGNVFPIYGVASAMG-----AKVHVEGNYFMGYGA 251 (340)
T ss_dssp ---S--EEEEESCEEECCCCCSCSSCCSCCEEEEEETT-----CEEEEESCEEECSCH
T ss_pred ---C--eEEEEccEEECCccccccccceeeeeEecCCC-----CEEEEECcEEECCCc
Confidence 1 568889999881 11223333321 467888888888776
No 52
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=98.37 E-value=1.6e-05 Score=76.19 Aligned_cols=40 Identities=15% Similarity=0.324 Sum_probs=28.4
Q ss_pred hHHHHHHHHHHhhhhccCCCe----EEEECCCceEEEEeEec---cccEEEEc
Q 013402 54 NTKAFREAIYRIQHLRRSGGT----LLYVPPGVYLTGSFNLT---SHMTLYLA 99 (443)
Q Consensus 54 dt~aiq~Ai~~~~~~~~~gg~----~V~ip~G~Y~~~~l~l~---s~~tl~~~ 99 (443)
+-..||+||+++. .+. +|+|+||+|. ..+.++ .+++|.++
T Consensus 14 ~f~TIq~AI~aap-----~~~~~~~~I~I~~G~Y~-E~V~I~~~k~~Itl~G~ 60 (317)
T 1xg2_A 14 DYQTLAEAVAAAP-----DKSKTRYVIYVKRGTYK-ENVEVASNKMNLMIVGD 60 (317)
T ss_dssp SBSSHHHHHHHSC-----SSCSSCEEEEECSEEEE-CCEEECTTSCSEEEEES
T ss_pred CcccHHHHHhhcc-----cCCCceEEEEEcCCEEe-eeeecCCCCCcEEEEEc
Confidence 3456999999983 344 9999999996 455553 45666654
No 53
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=98.36 E-value=4.7e-06 Score=81.00 Aligned_cols=98 Identities=21% Similarity=0.174 Sum_probs=61.4
Q ss_pred ceEEeeeeeeEEEEeEEEECCCC-CCCCCeecccCCccEEEEeeEEecC--------------CceEEEccCcccccccc
Q 013402 199 WNIHPVYCSNVVIRYVTILAPAD-SPNTDGIDPDSSSNVCIEDSYISTG--------------DDLVAVKSGWDEYGIAY 263 (443)
Q Consensus 199 ~~i~~~~~~~v~i~~~~I~~~~~-~~n~DGi~~~~s~nv~I~n~~i~~g--------------dD~i~i~sg~~~~g~~~ 263 (443)
.+|.+..++||.|+|++|+.... ....|+|.+..++||.|++|.|..+ |..+.++.
T Consensus 103 ~gl~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~~s~nVWIDH~s~s~~~~~~~g~~~~~~~~DGl~di~~--------- 173 (353)
T 1air_A 103 FGIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVDDSPNVWVDHNELFAANHECDGTPDNDTTFESAVDIKG--------- 173 (353)
T ss_dssp SEEEEESCCSEEEESCEEESCSCGGGTCCSEEEESCCSEEEESCEEECCSCCCTTCGGGCCSSCCSEEEES---------
T ss_pred ceEEEeccCcEEEeccEEEeCCCCCCCCCeEEeeCCCcEEEEeeEEecCCcccccccccccccccceeeec---------
Confidence 35555666677777777765321 2346888888888888888888642 22334433
Q ss_pred CCCcccEEEEEEEEeCCCceEEEccccCCcEEEEEEEeeEEeCC
Q 013402 264 GHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNV 307 (443)
Q Consensus 264 ~~~~~ni~i~n~~~~~~~~gi~igs~~~~~v~nI~i~n~~~~~~ 307 (443)
++.+|+|++|+|.+...+.-+|+.......+|+|.++.+.+.
T Consensus 174 --~s~~VTISnn~f~~h~k~~LiG~sd~~~g~~vT~hhN~f~~~ 215 (353)
T 1air_A 174 --ASNTVTVSYNYIHGVKKVGLDGSSSSDTGRNITYHHNYYNDV 215 (353)
T ss_dssp --SCCEEEEESCEEEEEEECCEESSSTTCCCCEEEEESCEEEEE
T ss_pred --ccCcEEEEeeEEcCCCceeEECCCcCCCCceEEEEceEEcCC
Confidence 378888888888764444455654322115788888877653
No 54
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=98.34 E-value=8.6e-06 Score=78.05 Aligned_cols=134 Identities=18% Similarity=0.214 Sum_probs=74.8
Q ss_pred eeeeEEEEeEEEECCCCCCCCCeecccC-CccEEEEeeEEec----------CCceEEEccCccccccccCCCcccEEEE
Q 013402 205 YCSNVVIRYVTILAPADSPNTDGIDPDS-SSNVCIEDSYIST----------GDDLVAVKSGWDEYGIAYGHPSSGITIR 273 (443)
Q Consensus 205 ~~~~v~i~~~~I~~~~~~~n~DGi~~~~-s~nv~I~n~~i~~----------gdD~i~i~sg~~~~g~~~~~~~~ni~i~ 273 (443)
.++||.|+|++|+... ....|+|.+.. ++||.|++|.+.. .|..+.++.+ +.+|+|+
T Consensus 101 ~a~NVIIrNl~i~~~~-~~~~DaI~i~~~s~nVWIDH~s~s~~~~g~~~~~~~Dgl~di~~~-----------s~~VTIS 168 (326)
T 3vmv_A 101 NAHNIIIQNVSIHHVR-EGEGTAIEVTDDSKNVWIDHNEFYSEFPGNGDSDYYDGLVDMKRN-----------AEYITVS 168 (326)
T ss_dssp SEEEEEEESCEEECCC-STTSCSEEEETTCEEEEEESCEEECCSSTTSCTTSSCCSEEECTT-----------CEEEEEE
T ss_pred ecceEEEECeEEEcCC-CCCCCeEEEecCCCcEEEEeeEEeccccCCcCccccCcceEecCC-----------CceEEEE
Confidence 3444444444444322 23467788775 7888888888852 2444555543 7888888
Q ss_pred EEEEeCCCceEEEccccCCc--EEEEEEEeeEEeCCc-eeEEEEeecCCCceEEEEEEEeEEEccc-CeeEEEEcccCCC
Q 013402 274 RVTGSSPFSGIAVGSETSGG--VENVLAEHINLYNVG-VGIHVKTNIGRGGFIRNITVSDVYMENA-RKGIKIAGDVGDH 349 (443)
Q Consensus 274 n~~~~~~~~gi~igs~~~~~--v~nI~i~n~~~~~~~-~gi~i~s~~~~~g~v~nI~~~ni~~~~~-~~~i~i~~~~~~~ 349 (443)
+|+|..-+.+.-+|+..... -.+|+|.++.+.+.. +.=+++ .| .+++-|+.+.+. .+++.....
T Consensus 169 nn~f~~h~k~~LiG~sd~~~~~~~~vT~~~N~f~~~~~R~Pr~r-----~G---~~Hv~NN~~~n~~~~~~~~~~~---- 236 (326)
T 3vmv_A 169 WNKFENHWKTMLVGHTDNASLAPDKITYHHNYFNNLNSRVPLIR-----YA---DVHMFNNYFKDINDTAINSRVG---- 236 (326)
T ss_dssp SCEEEEEEECEEECSSSCGGGCCEEEEEESCEEEEEEECTTEEE-----SC---EEEEESCEEEEESSCSEEEETT----
T ss_pred ceEEecCceEEEECCCCCCcccCccEEEEeeEecCCcCcCCccc-----CC---cEEEEccEEECCCceEEeecCC----
Confidence 88887655566666543211 246788888776431 111221 11 456666666654 345443311
Q ss_pred CCCCCCCCCCCeEEeEEEEeE
Q 013402 350 PDDKFNPNALPVVNGITIKDV 370 (443)
Q Consensus 350 ~~~~~~~~~~~~i~nIt~~nI 370 (443)
....+++=.|++.
T Consensus 237 --------a~v~~e~N~F~~~ 249 (326)
T 3vmv_A 237 --------ARVFVENNYFDNV 249 (326)
T ss_dssp --------CEEEEESCEEEEE
T ss_pred --------cEEEEEceEEECC
Confidence 1125777777776
No 55
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=98.08 E-value=7.4e-05 Score=72.70 Aligned_cols=169 Identities=16% Similarity=0.178 Sum_probs=105.1
Q ss_pred eeEEeccCcEEeCCCchhhhhhccCCCCCCCCeeEEEE-eecceEEEeEEEecC------CCceEEeeeeeeEEEEeEEE
Q 013402 144 DVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFM-NSRSIIISNVIFQNS------PFWNIHPVYCSNVVIRYVTI 216 (443)
Q Consensus 144 nv~I~G~~G~idG~G~~~~~~~~~~~~~~~~~~~i~~~-~~~nv~I~~v~i~n~------~~~~i~~~~~~~v~i~~~~I 216 (443)
.+.|. .|-||.|+|..- .-....|.+. .++||.|++++|++. ....|.+..+++|.|++|++
T Consensus 103 ~l~v~-snkTI~G~G~~~----------~i~G~gl~i~~~a~NVIIrnL~i~~~~~~~~~g~DaI~i~~s~nVwIDHcs~ 171 (359)
T 1idk_A 103 GITVT-SNKSLIGEGSSG----------AIKGKGLRIVSGAENIIIQNIAVTDINPKYVWGGDAITLDDCDLVWIDHVTT 171 (359)
T ss_dssp CEEEC-SSEEEEECTTTC----------EEESCCEEECTTCEEEEEESCEEEEECTTEETSCCSEEECSCEEEEEESCEE
T ss_pred eEEeC-CCceEEEecCCe----------EEecceEEEecCCCcEEEeCeEEEcccccccccCCceeecCCCcEEEEeeEe
Confidence 46663 457999987421 0112248887 899999999999973 23678999999999999999
Q ss_pred ECCCCCCCCCeec---ccCCccEEEEeeEEecCCceEEEcc-CccccccccCCCcccEEEEEEEEeCC-CceEEEccccC
Q 013402 217 LAPADSPNTDGID---PDSSSNVCIEDSYISTGDDLVAVKS-GWDEYGIAYGHPSSGITIRRVTGSSP-FSGIAVGSETS 291 (443)
Q Consensus 217 ~~~~~~~n~DGi~---~~~s~nv~I~n~~i~~gdD~i~i~s-g~~~~g~~~~~~~~ni~i~n~~~~~~-~~gi~igs~~~ 291 (443)
.... |++. ...+++|+|+||.|...++- +... +..-++....+.+.++++.+++|.+. .+.-++..
T Consensus 172 s~~~-----d~~~~~g~~~s~~VTISnn~f~~~~~~-s~~~~G~h~~~~~L~G~sd~vT~hhN~f~~~~~R~Pr~r~--- 242 (359)
T 1idk_A 172 ARIG-----RQHYVLGTSADNRVSLTNNYIDGVSDY-SATCDGYHYWAIYLDGDADLVTMKGNYIYHTSGRSPKVQD--- 242 (359)
T ss_dssp EEES-----SCSEEECCCTTCEEEEESCEEECBCSC-BTTSSSBBSCCEEECCSSCEEEEESCEEESBCSCTTEECT---
T ss_pred ecCC-----CCcEEecccCcceEEEECcEecCCccc-ccccCccccceEEEEecCCCeEEEceEeecCcccCccccC---
Confidence 8642 4433 45689999999999853310 0000 00000111122357999999999754 22222221
Q ss_pred CcEEEEEEEeeEEeCC-ceeEEEEeecCCCceEEEEEEEeEEEcccCeeEE
Q 013402 292 GGVENVLAEHINLYNV-GVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 341 (443)
Q Consensus 292 ~~v~nI~i~n~~~~~~-~~gi~i~s~~~~~g~v~nI~~~ni~~~~~~~~i~ 341 (443)
-..+.+.|+.+.+. .+|+.+.. . ..|.+|++.+++...|+.
T Consensus 243 --g~~~hv~NN~~~n~~~~~i~~~~----~---~~i~~e~N~F~~~~~p~~ 284 (359)
T 1idk_A 243 --NTLLHAVNNYWYDISGHAFEIGE----G---GYVLAEGNVFQNVDTVLE 284 (359)
T ss_dssp --TCEEEEESCEEEEEEEEEEEECT----T---CEEEEESCEEEEEEEEEE
T ss_pred --CceEEEECCEEecccceEEeccC----C---cEEEEEccEEECCCCcee
Confidence 12578888888764 24544321 1 457788888887666543
No 56
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=98.07 E-value=1.9e-05 Score=76.66 Aligned_cols=145 Identities=17% Similarity=0.102 Sum_probs=96.0
Q ss_pred eEEEEeecceEEEeEEEecCC-----CceEEeeeeeeEEEEeEEEECCCCC--------CCCCee-cc-cCCccEEEEee
Q 013402 177 LIEFMNSRSIIISNVIFQNSP-----FWNIHPVYCSNVVIRYVTILAPADS--------PNTDGI-DP-DSSSNVCIEDS 241 (443)
Q Consensus 177 ~i~~~~~~nv~I~~v~i~n~~-----~~~i~~~~~~~v~i~~~~I~~~~~~--------~n~DGi-~~-~~s~nv~I~n~ 241 (443)
.|.+..++||.|++++|+..+ ...|.+..+++|.|++|.+...... ...||. ++ ..+++|+|+||
T Consensus 104 gl~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~~s~nVWIDH~s~s~~~~~~~g~~~~~~~~DGl~di~~~s~~VTISnn 183 (353)
T 1air_A 104 GIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVDDSPNVWVDHNELFAANHECDGTPDNDTTFESAVDIKGASNTVTVSYN 183 (353)
T ss_dssp EEEEESCCSEEEESCEEESCSCGGGTCCSEEEESCCSEEEESCEEECCSCCCTTCGGGCCSSCCSEEEESSCCEEEEESC
T ss_pred eEEEeccCcEEEeccEEEeCCCCCCCCCeEEeeCCCcEEEEeeEEecCCcccccccccccccccceeeecccCcEEEEee
Confidence 478889999999999999754 3579999999999999999864211 112553 44 36899999999
Q ss_pred EEecCCceEEEccCccccccccCCCcccEEEEEEEEeCC-CceEEEccccCCcEEEEEEEeeEEeCCc-eeEEEEeecCC
Q 013402 242 YISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP-FSGIAVGSETSGGVENVLAEHINLYNVG-VGIHVKTNIGR 319 (443)
Q Consensus 242 ~i~~gdD~i~i~sg~~~~g~~~~~~~~ni~i~n~~~~~~-~~gi~igs~~~~~v~nI~i~n~~~~~~~-~gi~i~s~~~~ 319 (443)
.|...+-+.-+++. +.+. ..+|++.+|+|.+. .+.-++.. + .+.+.|+.+.+.. +|+....
T Consensus 184 ~f~~h~k~~LiG~s-d~~~------g~~vT~hhN~f~~~~~R~Pr~r~----G--~~Hv~NN~~~n~~~~~~~~~~---- 246 (353)
T 1air_A 184 YIHGVKKVGLDGSS-SSDT------GRNITYHHNYYNDVNARLPLQRG----G--LVHAYNNLYTNITGSGLNVRQ---- 246 (353)
T ss_dssp EEEEEEECCEESSS-TTCC------CCEEEEESCEEEEEEECSCEEES----S--EEEEESCEEEEESSCSEEEET----
T ss_pred EEcCCCceeEECCC-cCCC------CceEEEEceEEcCCcCCCCCCcC----c--eEEEEccEEECCCCceeccCC----
Confidence 99864433333331 1111 15899999998653 22223321 1 5778888887642 4554321
Q ss_pred CceEEEEEEEeEEEcccCeeEE
Q 013402 320 GGFIRNITVSDVYMENARKGIK 341 (443)
Q Consensus 320 ~g~v~nI~~~ni~~~~~~~~i~ 341 (443)
+ ..|.+|++.+++...|+.
T Consensus 247 ~---~~i~~e~N~F~~~~~p~~ 265 (353)
T 1air_A 247 N---GQALIENNWFEKAINPVT 265 (353)
T ss_dssp T---CEEEEESCEEEEEESSEE
T ss_pred C---cEEEEEceEEECCCCceE
Confidence 1 356788888887766653
No 57
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=98.06 E-value=1.4e-05 Score=79.25 Aligned_cols=117 Identities=26% Similarity=0.282 Sum_probs=74.7
Q ss_pred eEEeeeeeeEEEEeEEEECCCC---------------CCCCCeecccCCccEEEEeeEEecC------------------
Q 013402 200 NIHPVYCSNVVIRYVTILAPAD---------------SPNTDGIDPDSSSNVCIEDSYISTG------------------ 246 (443)
Q Consensus 200 ~i~~~~~~~v~i~~~~I~~~~~---------------~~n~DGi~~~~s~nv~I~n~~i~~g------------------ 246 (443)
+|.+..++||.|+|++|+...+ ....|+|.+..++||.|++|.|..+
T Consensus 149 gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~~~ 228 (416)
T 1vbl_A 149 GFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISIEGSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQQH 228 (416)
T ss_dssp EEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCC
T ss_pred EEEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEecCCceEEEEccEEecCCCcccccccccCcceeec
Confidence 4555667777777777765321 1246889888899999999999864
Q ss_pred CceEEEccCccccccccCCCcccEEEEEEEEeCCCceEEEccccCC----cEEEEEEEeeEEeCCc-eeEEEEeecCCCc
Q 013402 247 DDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSG----GVENVLAEHINLYNVG-VGIHVKTNIGRGG 321 (443)
Q Consensus 247 dD~i~i~sg~~~~g~~~~~~~~ni~i~n~~~~~~~~gi~igs~~~~----~v~nI~i~n~~~~~~~-~gi~i~s~~~~~g 321 (443)
|..+.++.+ +.+|+|++|+|.+-..++-+|+.... +..+|+|.++.+.+.. +.-++ +.|
T Consensus 229 DGl~Di~~~-----------s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~VT~hhN~f~~~~~R~Pr~-----R~G 292 (416)
T 1vbl_A 229 DGALDIKNS-----------SDFITISYNVFTNHDKVTLIGASDSRMADSGHLRVTLHHNYYKNVTQRLPRV-----RFG 292 (416)
T ss_dssp CCSEEEESS-----------CEEEEEESCEEEEEEECCEECSCTTCGGGTTCCCEEEESCEEEEEEECSSEE-----SSC
T ss_pred ccceeeecC-----------CCcEEEEeeEEcCCCceeEeCCCCCCcccCCceEEEEECcEecCCccCCccc-----ccc
Confidence 334445443 78999999999875556666664321 2336888888886542 22222 123
Q ss_pred eEEEEEEEeEEEcc
Q 013402 322 FIRNITVSDVYMEN 335 (443)
Q Consensus 322 ~v~nI~~~ni~~~~ 335 (443)
.+++-|+.+.+
T Consensus 293 ---~~Hv~NN~~~n 303 (416)
T 1vbl_A 293 ---QVHIYNNYYEF 303 (416)
T ss_dssp ---EEEEESCEEEE
T ss_pred ---eEEEEcceEEC
Confidence 25666666654
No 58
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=98.04 E-value=6.2e-05 Score=72.87 Aligned_cols=40 Identities=20% Similarity=0.343 Sum_probs=28.3
Q ss_pred hHHHHHHHHHHhhhhccCCC---eEEEECCCceEEEEeEe-ccccEEEEc
Q 013402 54 NTKAFREAIYRIQHLRRSGG---TLLYVPPGVYLTGSFNL-TSHMTLYLA 99 (443)
Q Consensus 54 dt~aiq~Ai~~~~~~~~~gg---~~V~ip~G~Y~~~~l~l-~s~~tl~~~ 99 (443)
+-..||+||+++. .+ -+|+|+||+|.- .+.+ |.+++|.++
T Consensus 17 ~f~TIq~Ai~aap-----~~~~~~~I~I~~G~Y~E-~V~I~k~~Itl~G~ 60 (342)
T 2nsp_A 17 TFKTIADAIASAP-----AGSTPFVILIKNGVYNE-RLTITRNNLHLKGE 60 (342)
T ss_dssp CBSSHHHHHHTSC-----SSSSCEEEEECSEEEEC-CEEECSTTEEEEES
T ss_pred CcchHHHHHHhcc-----cCCCcEEEEEeCCEEEE-EEEEecCeEEEEec
Confidence 3456999999874 34 399999999973 4444 355777665
No 59
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=98.04 E-value=4.6e-05 Score=74.11 Aligned_cols=73 Identities=23% Similarity=0.253 Sum_probs=48.3
Q ss_pred CCCeecccC-CccEEEEeeEEecC------------------CceEEEccCccccccccCCCcccEEEEEEEEeCCCceE
Q 013402 224 NTDGIDPDS-SSNVCIEDSYISTG------------------DDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 284 (443)
Q Consensus 224 n~DGi~~~~-s~nv~I~n~~i~~g------------------dD~i~i~sg~~~~g~~~~~~~~ni~i~n~~~~~~~~gi 284 (443)
..|+|.+.. ++||.|++|.|..+ |..+.++.+ +.+|+|++|+|..-..++
T Consensus 142 ~~DaI~i~~~s~nVWIDHcs~s~~~~~~~~~~~~~G~~~~~~DgllDi~~~-----------s~~VTiS~n~f~~h~k~~ 210 (361)
T 1pe9_A 142 EWDAMNITNGAHHVWIDHVTISDGNFTDDMYTTKDGETYVQHDGALDIKRG-----------SDYVTISNSLIDQHDKTM 210 (361)
T ss_dssp CCCSEEEETTCEEEEEESCEEECTTSCGGGCCEETTEECCCCCCSEEECTT-----------CEEEEEESCEEEEEEECE
T ss_pred CCceEEeecCCceEEEEccEeecccccccccccccCcceeeccceeeeecC-----------CCcEEEEeeEEcCCCcee
Confidence 367888877 88888888888753 444555543 788888888887644555
Q ss_pred EEccccCC-----cEEEEEEEeeEEeCC
Q 013402 285 AVGSETSG-----GVENVLAEHINLYNV 307 (443)
Q Consensus 285 ~igs~~~~-----~v~nI~i~n~~~~~~ 307 (443)
-+|+.... +-.+|+|.++.+.+.
T Consensus 211 LiG~sd~~~~~d~g~~~vT~hhN~f~~~ 238 (361)
T 1pe9_A 211 LIGHSDSNGSQDKGKLHVTLFNNVFNRV 238 (361)
T ss_dssp EESCCTTCHHHHTTCCEEEEESCEEEEE
T ss_pred EecCCCCCcccccCcceEEEECeEEcCc
Confidence 56654221 223688888887653
No 60
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=98.02 E-value=5.1e-05 Score=74.80 Aligned_cols=72 Identities=19% Similarity=0.216 Sum_probs=41.5
Q ss_pred CCCeecccCCccEEEEeeEEecC------------------CceEEEccCccccccccCCCcccEEEEEEEEeCCCceEE
Q 013402 224 NTDGIDPDSSSNVCIEDSYISTG------------------DDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIA 285 (443)
Q Consensus 224 n~DGi~~~~s~nv~I~n~~i~~g------------------dD~i~i~sg~~~~g~~~~~~~~ni~i~n~~~~~~~~gi~ 285 (443)
..|+|.+..++||.|++|.|..+ |..+.++.+ +.+|+|++|+|.+-..+.-
T Consensus 182 ~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~~Dgl~Di~~~-----------s~~VTISnn~f~~h~k~~L 250 (399)
T 2o04_A 182 QYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHHDGQTDASNG-----------ANYITMSYNYYHDHDKSSI 250 (399)
T ss_dssp CCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCCCCSEEEETT-----------CEEEEEESCEEEEEEECCE
T ss_pred CCCeEEecCCCcEEEEeeeeecCCCccccccccccceeeccccceeeecc-----------CCcEEEEeeEEcCCCceeE
Confidence 35667776677777777777643 333444432 6777777777765444455
Q ss_pred EccccCC----cEEEEEEEeeEEeC
Q 013402 286 VGSETSG----GVENVLAEHINLYN 306 (443)
Q Consensus 286 igs~~~~----~v~nI~i~n~~~~~ 306 (443)
+|+.... +..+|+|.++.+.+
T Consensus 251 iG~sd~~~~d~g~~~vT~h~N~f~~ 275 (399)
T 2o04_A 251 FGSSDSKTSDDGKLKITLHHNRYKN 275 (399)
T ss_dssp ESCCTTCGGGTTCCCEEEESCEEEE
T ss_pred eCCCCCCccccCceeEEEECcEecC
Confidence 5553211 12356777776654
No 61
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=97.96 E-value=2.5e-05 Score=77.04 Aligned_cols=167 Identities=17% Similarity=0.126 Sum_probs=101.8
Q ss_pred eEEe-ccCcEEeCCCchhhhhhccCCCCCCCCeeEEEEeecceEEEeEEEecC-------------------CCceEEee
Q 013402 145 VVIT-GENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNS-------------------PFWNIHPV 204 (443)
Q Consensus 145 v~I~-G~~G~idG~G~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i~n~-------------------~~~~i~~~ 204 (443)
+.|. +.+-||.|+|..- .-....|.+.. +||.|++++|++. ....|.+.
T Consensus 121 ~~i~v~snkTI~G~G~~~----------~i~g~gl~i~~-~NVIIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~ 189 (399)
T 2o04_A 121 VMVDIPANTTIVGSGTNA----------KVVGGNFQIKS-DNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITIN 189 (399)
T ss_dssp HEEECCSSEEEEESSSCC----------EEESCEEEECS-EEEEEESCEEECCCCSSCEEETTSSTTCEEECCCCSEEEE
T ss_pred eEEEeCCCceEEeccCCe----------EEeeCEEEeeC-CCEEEeCeEEecCccccccccccccccccccCCCCeEEec
Confidence 3444 4457999987421 11123578888 9999999999864 23568899
Q ss_pred eeeeEEEEeEEEECCCCC------------CCCCee-ccc-CCccEEEEeeEEecCCceEEEccCccccccccCCCcccE
Q 013402 205 YCSNVVIRYVTILAPADS------------PNTDGI-DPD-SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGI 270 (443)
Q Consensus 205 ~~~~v~i~~~~I~~~~~~------------~n~DGi-~~~-~s~nv~I~n~~i~~gdD~i~i~sg~~~~g~~~~~~~~ni 270 (443)
.+++|.|++|++....+. ...||. ++. .+++|+|+||.|...+-+.-+++. +.+. ......+|
T Consensus 190 ~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~~Dgl~Di~~~s~~VTISnn~f~~h~k~~LiG~s-d~~~--~d~g~~~v 266 (399)
T 2o04_A 190 GGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHHDGQTDASNGANYITMSYNYYHDHDKSSIFGSS-DSKT--SDDGKLKI 266 (399)
T ss_dssp SCEEEEEESCEEECTTCCGGGSCEETTEECCCCCCSEEEETTCEEEEEESCEEEEEEECCEESCC-TTCG--GGTTCCCE
T ss_pred CCCcEEEEeeeeecCCCccccccccccceeeccccceeeeccCCcEEEEeeEEcCCCceeEeCCC-CCCc--cccCceeE
Confidence 999999999999964210 013553 444 589999999999875544444432 1111 01113489
Q ss_pred EEEEEEEeCC-CceEEEccccCCcEEEEEEEeeEEeCCce------eEEEEeecCCCceEEEEEEEeEEEccc
Q 013402 271 TIRRVTGSSP-FSGIAVGSETSGGVENVLAEHINLYNVGV------GIHVKTNIGRGGFIRNITVSDVYMENA 336 (443)
Q Consensus 271 ~i~n~~~~~~-~~gi~igs~~~~~v~nI~i~n~~~~~~~~------gi~i~s~~~~~g~v~nI~~~ni~~~~~ 336 (443)
++.+|+|.+. .+.-++.. + .+.+.|+.+.+... +..|.... + ..|.+|++.++..
T Consensus 267 T~h~N~f~~~~~R~Pr~R~----G--~~Hv~NN~~~n~~~~~~~~~~ya~g~~~--~---~~i~~e~N~F~~~ 328 (399)
T 2o04_A 267 TLHHNRYKNIVQAAPRVRF----G--QVHVYNNYYEGSTSSSSYPFSYAWGIGK--S---SKIYAQNNVIDVP 328 (399)
T ss_dssp EEESCEEEEEEECTTEESS----C--EEEEESCEEECCTTCSSSCCCCSEEECT--T---CEEEEESCEEECT
T ss_pred EEECcEecCCcccCCCccc----c--eEEEEcceEECCCCCCccceeeEeccCC--C---cEEEEEceEEECC
Confidence 9999998653 23333321 1 47888998875421 12222211 1 3467777777764
No 62
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=97.92 E-value=0.0003 Score=67.33 Aligned_cols=159 Identities=19% Similarity=0.222 Sum_probs=104.2
Q ss_pred CeeeeEEeccC--cEEeCCCchhhhhhccCCCCCCCCeeEEEEeecceEEEeEEEecCC---CceEEeee-eeeEEEEeE
Q 013402 141 GLQDVVITGEN--GTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSP---FWNIHPVY-CSNVVIRYV 214 (443)
Q Consensus 141 ~~~nv~I~G~~--G~idG~G~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i~n~~---~~~i~~~~-~~~v~i~~~ 214 (443)
...|++|.|.. .+|.|.| |.+..++||.|++++|++.. ...|.+.. +++|.|++|
T Consensus 77 ~~sn~TI~G~g~~~~i~G~g-------------------l~i~~a~NVIIrNl~i~~~~~~~~DaI~i~~~s~nVWIDH~ 137 (326)
T 3vmv_A 77 EIKNISIIGVGTNGEFDGIG-------------------IRLSNAHNIIIQNVSIHHVREGEGTAIEVTDDSKNVWIDHN 137 (326)
T ss_dssp CEEEEEEEECTTCCEEESCC-------------------EEEESEEEEEEESCEEECCCSTTSCSEEEETTCEEEEEESC
T ss_pred CCCCeEEEecCCCeEEeCcE-------------------EEEEecceEEEECeEEEcCCCCCCCeEEEecCCCcEEEEee
Confidence 35788888861 2565544 77889999999999999864 46799996 999999999
Q ss_pred EEECCCC----CCCCCee-ccc-CCccEEEEeeEEecCCceEEEccCccccccccCCCcccEEEEEEEEeCC-CceEEEc
Q 013402 215 TILAPAD----SPNTDGI-DPD-SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP-FSGIAVG 287 (443)
Q Consensus 215 ~I~~~~~----~~n~DGi-~~~-~s~nv~I~n~~i~~gdD~i~i~sg~~~~g~~~~~~~~ni~i~n~~~~~~-~~gi~ig 287 (443)
++..... ....||. ++. .+++|+|+||.|...+-+.-+++. +.+.. .-.+|++.+|+|.+. .+.-++.
T Consensus 138 s~s~~~~g~~~~~~~Dgl~di~~~s~~VTISnn~f~~h~k~~LiG~s-d~~~~----~~~~vT~~~N~f~~~~~R~Pr~r 212 (326)
T 3vmv_A 138 EFYSEFPGNGDSDYYDGLVDMKRNAEYITVSWNKFENHWKTMLVGHT-DNASL----APDKITYHHNYFNNLNSRVPLIR 212 (326)
T ss_dssp EEECCSSTTSCTTSSCCSEEECTTCEEEEEESCEEEEEEECEEECSS-SCGGG----CCEEEEEESCEEEEEEECTTEEE
T ss_pred EEeccccCCcCccccCcceEecCCCceEEEEceEEecCceEEEECCC-CCCcc----cCccEEEEeeEecCCcCcCCccc
Confidence 9985321 1123553 553 488999999999875544444432 11110 024799999988653 2222332
Q ss_pred cccCCcEEEEEEEeeEEeCC-ceeEEEEeecCCCceEEEEEEEeEEEccc
Q 013402 288 SETSGGVENVLAEHINLYNV-GVGIHVKTNIGRGGFIRNITVSDVYMENA 336 (443)
Q Consensus 288 s~~~~~v~nI~i~n~~~~~~-~~gi~i~s~~~~~g~v~nI~~~ni~~~~~ 336 (443)
. + .+.+.|+.+.+. .+++.... + ..|.+|++.+++.
T Consensus 213 ~----G--~~Hv~NN~~~n~~~~~~~~~~----~---a~v~~e~N~F~~~ 249 (326)
T 3vmv_A 213 Y----A--DVHMFNNYFKDINDTAINSRV----G---ARVFVENNYFDNV 249 (326)
T ss_dssp S----C--EEEEESCEEEEESSCSEEEET----T---CEEEEESCEEEEE
T ss_pred C----C--cEEEEccEEECCCceEEeecC----C---cEEEEEceEEECC
Confidence 1 1 578888888764 35655432 1 4667777777765
No 63
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=97.91 E-value=5.1e-05 Score=73.82 Aligned_cols=144 Identities=20% Similarity=0.139 Sum_probs=89.5
Q ss_pred eeEEeccCcEEeCCCchhhhhhccCCCCCCCCeeEEE---EeecceEEEeEEEecCC---------------CceEEeee
Q 013402 144 DVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEF---MNSRSIIISNVIFQNSP---------------FWNIHPVY 205 (443)
Q Consensus 144 nv~I~G~~G~idG~G~~~~~~~~~~~~~~~~~~~i~~---~~~~nv~I~~v~i~n~~---------------~~~i~~~~ 205 (443)
.+.| +.|-||.|+|..- .-....|.+ .+++||.|++++|++.. ...|.+..
T Consensus 82 ~l~v-~snkTI~G~G~~~----------~i~g~gl~i~~~~~~~NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~~ 150 (361)
T 1pe9_A 82 QINI-PANTTVIGLGTDA----------KFINGSLIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITN 150 (361)
T ss_dssp EEEC-CSSEEEEECTTCC----------EEESSEEEEEGGGTCEEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEET
T ss_pred eEEe-cCCcEEEccCCCe----------EEecCEEEEecCCCCceEEEeCeEEEcCcccccccccccCcccCCceEEeec
Confidence 3444 4457999987421 011235788 68999999999998642 34788998
Q ss_pred -eeeEEEEeEEEECCCCC------------CCCCe-eccc-CCccEEEEeeEEecCCceEEEccCccccccccCCCcccE
Q 013402 206 -CSNVVIRYVTILAPADS------------PNTDG-IDPD-SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGI 270 (443)
Q Consensus 206 -~~~v~i~~~~I~~~~~~------------~n~DG-i~~~-~s~nv~I~n~~i~~gdD~i~i~sg~~~~g~~~~~~~~ni 270 (443)
+++|.|++|++....+. ...|| +++. .+++|+|++|.|...+-+.-+++. +.+.. ......+|
T Consensus 151 ~s~nVWIDHcs~s~~~~~~~~~~~~~G~~~~~~DgllDi~~~s~~VTiS~n~f~~h~k~~LiG~s-d~~~~-~d~g~~~v 228 (361)
T 1pe9_A 151 GAHHVWIDHVTISDGNFTDDMYTTKDGETYVQHDGALDIKRGSDYVTISNSLIDQHDKTMLIGHS-DSNGS-QDKGKLHV 228 (361)
T ss_dssp TCEEEEEESCEEECTTSCGGGCCEETTEECCCCCCSEEECTTCEEEEEESCEEEEEEECEEESCC-TTCHH-HHTTCCEE
T ss_pred CCceEEEEccEeecccccccccccccCcceeeccceeeeecCCCcEEEEeeEEcCCCceeEecCC-CCCcc-cccCcceE
Confidence 99999999999964210 01355 4454 589999999999875444444432 11100 00012469
Q ss_pred EEEEEEEeCC-CceEEEccccCCcEEEEEEEeeEEeC
Q 013402 271 TIRRVTGSSP-FSGIAVGSETSGGVENVLAEHINLYN 306 (443)
Q Consensus 271 ~i~n~~~~~~-~~gi~igs~~~~~v~nI~i~n~~~~~ 306 (443)
++.+|+|.+. .+.-++. .+ .+.+.|+.+.+
T Consensus 229 T~hhN~f~~~~~R~Pr~R----~G--~~Hv~NN~~~~ 259 (361)
T 1pe9_A 229 TLFNNVFNRVTERAPRVR----YG--SIHSFNNVFKG 259 (361)
T ss_dssp EEESCEEEEEEECSSEES----SC--EEEEESCEEEE
T ss_pred EEECeEEcCccccCcccc----cc--eEEEEcceEec
Confidence 9999988653 2222232 11 37888888853
No 64
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=97.90 E-value=7e-05 Score=74.19 Aligned_cols=142 Identities=12% Similarity=0.066 Sum_probs=99.4
Q ss_pred eEEEEeecceEEEeEEEecCCCceEEeeeeeeEEEEeEEEECCCCCCCCCeecccCC-ccEEEEeeEEecCC--------
Q 013402 177 LIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS-SNVCIEDSYISTGD-------- 247 (443)
Q Consensus 177 ~i~~~~~~nv~I~~v~i~n~~~~~i~~~~~~~v~i~~~~I~~~~~~~n~DGi~~~~s-~nv~I~n~~i~~gd-------- 247 (443)
.|.+ ..++++|++++|.+....+|.+.. .+.+|++|+|.... ..||.+... .+.+|+||.+....
T Consensus 109 ~i~i-~~~~~~i~gl~I~n~g~~GI~v~g-s~~~i~n~~i~~n~----~~GI~l~~~~s~n~I~nn~i~~N~d~~~~g~~ 182 (400)
T 1ru4_A 109 GFYV-TGDYWYFKGVEVTRAGYQGAYVIG-SHNTFENTAFHHNR----NTGLEINNGGSYNTVINSDAYRNYDPKKNGSM 182 (400)
T ss_dssp SEEE-CSSCEEEESEEEESCSSCSEEECS-SSCEEESCEEESCS----SCSEEECTTCCSCEEESCEEECCCCTTTTTSS
T ss_pred EEEE-ECCeEEEEeEEEEeCCCCcEEEeC-CCcEEEeEEEECCC----ceeEEEEcccCCeEEEceEEEcccCccccCcc
Confidence 4655 678999999999998877888876 78899999999743 348998764 48899999998632
Q ss_pred -ceEEEccCccccccccCCCcccEEEEEEEEeCC-CceEEEccccCCcEEEEEEEeeEEeCCc-------------eeEE
Q 013402 248 -DLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP-FSGIAVGSETSGGVENVLAEHINLYNVG-------------VGIH 312 (443)
Q Consensus 248 -D~i~i~sg~~~~g~~~~~~~~ni~i~n~~~~~~-~~gi~igs~~~~~v~nI~i~n~~~~~~~-------------~gi~ 312 (443)
|++.++.. ..++..|++|+++.. +.|+.+.. ....++|+||...+.. .|+.
T Consensus 183 ~dG~~~~~~----------~g~Gn~~~~~~~~~N~ddGidl~~----~~~~v~i~nn~a~~Ng~~~~~~n~~~gngnGf~ 248 (400)
T 1ru4_A 183 ADGFGPKQK----------QGPGNRFVGCRAWENSDDGFDLFD----SPQKVVIENSWAFRNGINYWNDSAFAGNGNGFK 248 (400)
T ss_dssp CCSEEECTT----------CCSCCEEESCEEESCSSCSEECTT----CCSCCEEESCEEESTTCCCSCCTTCCCCCCSEE
T ss_pred cceEEEEec----------ccCCeEEECCEEeecCCCcEEEEe----cCCCEEEEeEEEECCccccccccccccCCCCEE
Confidence 56766642 147889999999876 78888752 2235799999987542 2333
Q ss_pred EEeecCCCceEEEEEEEeEEEcc-cCeeEEE
Q 013402 313 VKTNIGRGGFIRNITVSDVYMEN-ARKGIKI 342 (443)
Q Consensus 313 i~s~~~~~g~v~nI~~~ni~~~~-~~~~i~i 342 (443)
+... ....+.+++|+...+ ...++..
T Consensus 249 lgg~----~~~~~~~v~nn~a~~N~~~G~~~ 275 (400)
T 1ru4_A 249 LGGN----QAVGNHRITRSVAFGNVSKGFDQ 275 (400)
T ss_dssp CCCT----TCCCCCEEESCEEESCSSEEEEC
T ss_pred Eecc----CCcCCEEEEeeEEECCcCcCEee
Confidence 3211 223456666666654 4556544
No 65
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=97.86 E-value=0.0001 Score=71.84 Aligned_cols=131 Identities=11% Similarity=0.098 Sum_probs=96.6
Q ss_pred cceEEEeEEEecC-----C------CceEEeee-eeeEEEEeEEEECCCCCCCCCeecccCCccEEEEeeEEecCCceEE
Q 013402 184 RSIIISNVIFQNS-----P------FWNIHPVY-CSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 251 (443)
Q Consensus 184 ~nv~I~~v~i~n~-----~------~~~i~~~~-~~~v~i~~~~I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~ 251 (443)
++|++++++|++. + .-+|.+.. .++++|++++|... .-||.+..+++.+|++++|.....||.
T Consensus 136 s~V~~~~v~I~G~~~~~~G~s~~~~dAGI~v~~~~d~~~I~nn~i~~~-----~fGI~l~~a~~~~I~~N~I~e~GNgI~ 210 (410)
T 2inu_A 136 SGIVFRDFCLDGVGFTPGKNSYHNGKTGIEVASDNDSFHITGMGFVYL-----EHALIVRGADALRVNDNMIAECGNCVE 210 (410)
T ss_dssp ECCEEESCEEECCCCSSSTTSCCCSCEEEEECSCEESCEEESCEEESC-----SEEEEETTEESCEEESCEEESSSEEEE
T ss_pred CCcEECCEEEECCEeecCCCCcccCceeEEEeccCCeEEEECCEEecc-----cEEEEEccCCCcEEECCEEEecCCcee
Confidence 5666666666655 3 23577765 88899999999984 579999999999999999998778898
Q ss_pred EccCccccccccCCCcccEEEEEEEEeCCCceEEEccccCCcEEEEEEEeeEE-eCCceeEEEEeecCCCceEEEEEEEe
Q 013402 252 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINL-YNVGVGIHVKTNIGRGGFIRNITVSD 330 (443)
Q Consensus 252 i~sg~~~~g~~~~~~~~ni~i~n~~~~~~~~gi~igs~~~~~v~nI~i~n~~~-~~~~~gi~i~s~~~~~g~v~nI~~~n 330 (443)
+... ++...|+++.+....+|..|..+ ...+.+|+++.+ ...+.|+.+... .+-.|++
T Consensus 211 L~G~-----------~~~~~I~~N~i~~~~dG~gIyl~---ns~~~~I~~N~i~~~~R~gIh~m~s-------~~~~i~~ 269 (410)
T 2inu_A 211 LTGA-----------GQATIVSGNHMGAGPDGVTLLAE---NHEGLLVTGNNLFPRGRSLIEFTGC-------NRCSVTS 269 (410)
T ss_dssp ECSC-----------EESCEEESCEEECCTTSEEEEEE---SEESCEEESCEECSCSSEEEEEESC-------BSCEEES
T ss_pred eccc-----------cccceEecceeeecCCCCEEEEE---eCCCCEEECCCcccCcceEEEEEcc-------CCCEEEC
Confidence 8763 68899999999888777444332 466788999977 558899988643 3334555
Q ss_pred EEEcccCeeE
Q 013402 331 VYMENARKGI 340 (443)
Q Consensus 331 i~~~~~~~~i 340 (443)
.++++...++
T Consensus 270 N~f~~~~~Gi 279 (410)
T 2inu_A 270 NRLQGFYPGM 279 (410)
T ss_dssp CEEEESSSCS
T ss_pred CEEecceeEE
Confidence 5555544443
No 66
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=97.84 E-value=0.00015 Score=70.68 Aligned_cols=168 Identities=15% Similarity=0.091 Sum_probs=101.4
Q ss_pred eeEEeccCcEEeCCCchhhhhhccCCCCCCCCeeEEEE-eecceEEEeEEEecCC------CceEEeeeeeeEEEEeEEE
Q 013402 144 DVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFM-NSRSIIISNVIFQNSP------FWNIHPVYCSNVVIRYVTI 216 (443)
Q Consensus 144 nv~I~G~~G~idG~G~~~~~~~~~~~~~~~~~~~i~~~-~~~nv~I~~v~i~n~~------~~~i~~~~~~~v~i~~~~I 216 (443)
.|.|.- +-+|+|.|..- .-....|.+. .++||.|++++|++.. ...|.+..+++|.|++|++
T Consensus 103 ~i~v~s-nkTI~G~g~~~----------~I~G~gl~i~~~a~NVIIrnl~i~~~~~~~~~~~DaI~i~~s~nvwIDHcs~ 171 (359)
T 1qcx_A 103 PITVNS-NKSIVGQGTKG----------VIKGKGLRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVDDSDLVWIDHVTT 171 (359)
T ss_dssp CEECCS-SEEEEECTTCC----------EEESCCEEEETTCCCEEEESCEEEEECTTEETSCCSEEEESCCCEEEESCEE
T ss_pred eEEeCC-CceEEecCCce----------EEecceEEEecCCCCEEEeCcEEEecCCcccccCceeEecCCceEEEEeeEe
Confidence 444443 47899887410 0112248887 8999999999999743 3678899999999999999
Q ss_pred ECCCCCCCCCeec---ccCCccEEEEeeEEecCCceEEEcc-CccccccccCCCcccEEEEEEEEeCC-CceEEEccccC
Q 013402 217 LAPADSPNTDGID---PDSSSNVCIEDSYISTGDDLVAVKS-GWDEYGIAYGHPSSGITIRRVTGSSP-FSGIAVGSETS 291 (443)
Q Consensus 217 ~~~~~~~n~DGi~---~~~s~nv~I~n~~i~~gdD~i~i~s-g~~~~g~~~~~~~~ni~i~n~~~~~~-~~gi~igs~~~ 291 (443)
... .|+.. ...+++|+|+||.|....+- +... +...++..+.+.+.++++.+++|.+. .+.-++..
T Consensus 172 s~~-----~d~~~~~~~~~s~~vTISnn~f~~~~~~-s~~~~G~H~~~~~l~G~sd~vT~~~N~f~~~~~R~Pr~r~--- 242 (359)
T 1qcx_A 172 ARI-----GRQHIVLGTSADNRVTISYSLIDGRSDY-SATCNGHHYWGVYLDGSNDMVTLKGNYFYNLSGRMPKVQG--- 242 (359)
T ss_dssp EEE-----SSCSEEECSSCCEEEEEESCEEECBCSS-BTTSSSBBSCCEEECCSSEEEEEESCEEESBCSCTTEECS---
T ss_pred ecc-----CcCceeecccccccEEEECcEecCCccc-cccCcccccceeEEecCCCCeehcccEeccCcccCceecC---
Confidence 864 34432 34689999999999853220 0000 00001111112256888888888654 22222221
Q ss_pred CcEEEEEEEeeEEeCC-ceeEEEEeecCCCceEEEEEEEeEEEcccCeeE
Q 013402 292 GGVENVLAEHINLYNV-GVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 340 (443)
Q Consensus 292 ~~v~nI~i~n~~~~~~-~~gi~i~s~~~~~g~v~nI~~~ni~~~~~~~~i 340 (443)
-..+.+.|+.+.+. .+++.... -..|.+|++.+++...|+
T Consensus 243 --~~~~hv~NN~~~n~~~~a~~~~~-------~~~i~~e~N~F~~~~~~~ 283 (359)
T 1qcx_A 243 --NTLLHAVNNLFHNFDGHAFEIGT-------GGYVLAEGNVFQDVNVVV 283 (359)
T ss_dssp --SEEEEEESCEEEEEEEEEEEECT-------TEEEEEESCEEEEEEEEE
T ss_pred --CceEEEEccEEECccCeEEecCC-------CceEEEEeeEEECCCccc
Confidence 12577888887764 23433211 246778888888766664
No 67
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=97.76 E-value=0.00016 Score=71.60 Aligned_cols=144 Identities=17% Similarity=0.082 Sum_probs=92.2
Q ss_pred eEEEEeecceEEEeEEEecC-------------------CCceEEeeeeeeEEEEeEEEECCCCC------------CCC
Q 013402 177 LIEFMNSRSIIISNVIFQNS-------------------PFWNIHPVYCSNVVIRYVTILAPADS------------PNT 225 (443)
Q Consensus 177 ~i~~~~~~nv~I~~v~i~n~-------------------~~~~i~~~~~~~v~i~~~~I~~~~~~------------~n~ 225 (443)
.|.+..++||.|++++|++. ....|.+..+++|.|++|++...... ...
T Consensus 149 gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~~~ 228 (416)
T 1vbl_A 149 GFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISIEGSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQQH 228 (416)
T ss_dssp EEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCC
T ss_pred EEEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEecCCceEEEEccEEecCCCcccccccccCcceeec
Confidence 47888999999999999864 23568999999999999999964210 113
Q ss_pred Ce-eccc-CCccEEEEeeEEecCCceEEEccCccccccccCCCcccEEEEEEEEeCC-CceEEEccccCCcEEEEEEEee
Q 013402 226 DG-IDPD-SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP-FSGIAVGSETSGGVENVLAEHI 302 (443)
Q Consensus 226 DG-i~~~-~s~nv~I~n~~i~~gdD~i~i~sg~~~~g~~~~~~~~ni~i~n~~~~~~-~~gi~igs~~~~~v~nI~i~n~ 302 (443)
|| +++. .+++|+|++|.|...+-+.-+++. +.+. ......+|++.+|+|.+. .+.-++.. + .+++.|+
T Consensus 229 DGl~Di~~~s~~VTISnn~f~~h~k~~LiG~s-d~~~--~d~g~~~VT~hhN~f~~~~~R~Pr~R~----G--~~Hv~NN 299 (416)
T 1vbl_A 229 DGALDIKNSSDFITISYNVFTNHDKVTLIGAS-DSRM--ADSGHLRVTLHHNYYKNVTQRLPRVRF----G--QVHIYNN 299 (416)
T ss_dssp CCSEEEESSCEEEEEESCEEEEEEECCEECSC-TTCG--GGTTCCCEEEESCEEEEEEECSSEESS----C--EEEEESC
T ss_pred ccceeeecCCCcEEEEeeEEcCCCceeEeCCC-CCCc--ccCCceEEEEECcEecCCccCCccccc----c--eEEEEcc
Confidence 55 3444 589999999999975544444432 1111 011124799999998653 23333321 1 4788899
Q ss_pred EEeCCc-------eeEEEEeecCCCceEEEEEEEeEEEccc
Q 013402 303 NLYNVG-------VGIHVKTNIGRGGFIRNITVSDVYMENA 336 (443)
Q Consensus 303 ~~~~~~-------~gi~i~s~~~~~g~v~nI~~~ni~~~~~ 336 (443)
.+.+.. +++.... + ..|.+|++.++..
T Consensus 300 ~~~n~~~~~~~~~ya~g~~~----~---~~i~~E~N~F~~~ 333 (416)
T 1vbl_A 300 YYEFSNLADYDFQYAWGVGV----F---SQIYAQNNYFSFD 333 (416)
T ss_dssp EEEECTTSSSCCCCSEEEET----T---CEEEEESCEEEES
T ss_pred eEECCCCCcccceeEeccCC----C---cEEEEECCEEECC
Confidence 887532 3343311 1 3467777777754
No 68
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=97.69 E-value=0.00074 Score=65.55 Aligned_cols=146 Identities=16% Similarity=0.072 Sum_probs=92.7
Q ss_pred EEEEeecceEEEeEEEecCC---------------CceEEeeeeeeEEEEeEEEECCCC---------CC---CCCe-ec
Q 013402 178 IEFMNSRSIIISNVIFQNSP---------------FWNIHPVYCSNVVIRYVTILAPAD---------SP---NTDG-ID 229 (443)
Q Consensus 178 i~~~~~~nv~I~~v~i~n~~---------------~~~i~~~~~~~v~i~~~~I~~~~~---------~~---n~DG-i~ 229 (443)
|.+..++||.|++++|++.. ...|.+..+++|.|++|++....+ +. ..|| ++
T Consensus 98 l~i~~~~NVIIrnl~i~~~~~~~p~~~~~~g~~~~~DaI~i~~s~nVWIDH~s~s~~~~~d~~~~~~~G~~~~~~Dgl~D 177 (355)
T 1pcl_A 98 LVIKGVKNVILRNLYIETPVDVAPHYESGDGWNAEWDAAVIDNSTNVWVDHVTISDGSFTDDKYTTKDGEKYVQHDGALD 177 (355)
T ss_pred EEEecCCeEEEeeeEEEcCcccccccccccCccccCceEEecCCCcEEEEeeEEeccccCccccccccCcccccccccee
Confidence 77788999999999998641 357889999999999999996421 11 1355 34
Q ss_pred cc-CCccEEEEeeEEecCCceEEEccCccccccccCCCcccEEEEEEEEeCC-CceEEEccccCCcEEEEEEEeeEEeCC
Q 013402 230 PD-SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP-FSGIAVGSETSGGVENVLAEHINLYNV 307 (443)
Q Consensus 230 ~~-~s~nv~I~n~~i~~gdD~i~i~sg~~~~g~~~~~~~~ni~i~n~~~~~~-~~gi~igs~~~~~v~nI~i~n~~~~~~ 307 (443)
+. .+++|+|++|.|...+-+.-+++. +.+.. ......+|++.+|+|.+. .+.-++.. + .+.+.|+.+.+.
T Consensus 178 i~~~s~~VTiS~n~f~~h~k~~LiG~s-d~~~~-~d~g~~~vT~hhN~f~~~~~R~PrvR~----G--~~Hv~NN~~~~~ 249 (355)
T 1pcl_A 178 IKKGSDYVTISYSRFELHDKTILIGHS-DSNGS-QDSGKLRVTFHNNVFDRVTERAPRVRF----G--SIHAYNNVYLGD 249 (355)
T ss_pred eecCCCcEEEEeeEEcCCCceEEeCCC-CCCcc-cccCcceEEEECcEEeCCcccCCceec----c--eEEEEcceEEcc
Confidence 54 589999999999986655555442 11110 011234799999999764 23333321 1 377888888653
Q ss_pred c-e-----eEEEEeecCCCceEEEEEEEeEEEccc
Q 013402 308 G-V-----GIHVKTNIGRGGFIRNITVSDVYMENA 336 (443)
Q Consensus 308 ~-~-----gi~i~s~~~~~g~v~nI~~~ni~~~~~ 336 (443)
. . +..+.. +.-..|.+|++.++..
T Consensus 250 ~~~~~~~~~ya~g~-----~~~~~i~~e~N~F~~~ 279 (355)
T 1pcl_A 250 VKHSVYPYLYSFGL-----GTSGSILSESNSFTLS 279 (355)
T ss_pred cCCCccccceEecC-----CCCcEEEEEccEEECC
Confidence 2 1 222221 1123567788877764
No 69
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=97.62 E-value=0.00023 Score=68.61 Aligned_cols=148 Identities=18% Similarity=0.148 Sum_probs=96.0
Q ss_pred eEEEE-eecceEEEeEEEecCC----CceEEee-----eeeeEEEEeEEEECCCC------CCCCCe-eccc-CCccEEE
Q 013402 177 LIEFM-NSRSIIISNVIFQNSP----FWNIHPV-----YCSNVVIRYVTILAPAD------SPNTDG-IDPD-SSSNVCI 238 (443)
Q Consensus 177 ~i~~~-~~~nv~I~~v~i~n~~----~~~i~~~-----~~~~v~i~~~~I~~~~~------~~n~DG-i~~~-~s~nv~I 238 (443)
.|.+. +++||.|++++|++.. ...|.+. .+++|.|++|++..... ..-.|| +++. .+++|+|
T Consensus 87 gl~i~~~~~NVIIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~~~~~~~~Dg~idi~~~s~~VTI 166 (330)
T 2qy1_A 87 GIRVVGNAHNVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLTKCSGAGDASFDGGIDMKKGVHHVTV 166 (330)
T ss_dssp EEEEESSCEEEEEESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEECCCCCCTTCTTCSSCCSEEEESSCEEEEE
T ss_pred eEEEeCCCCeEEEeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEccccccccCCcceeecccccccCcceEEE
Confidence 47888 8999999999999864 5678888 69999999999975321 011144 3543 5899999
Q ss_pred EeeEEecCCceEEEccCccccccccCCCcccEEEEEEEEeCC-CceEEEccccCCcEEEEEEEeeEEeCC-ceeEEEEee
Q 013402 239 EDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP-FSGIAVGSETSGGVENVLAEHINLYNV-GVGIHVKTN 316 (443)
Q Consensus 239 ~n~~i~~gdD~i~i~sg~~~~g~~~~~~~~ni~i~n~~~~~~-~~gi~igs~~~~~v~nI~i~n~~~~~~-~~gi~i~s~ 316 (443)
+||.|.+.+-+.-+++. +.+.. ....+|++.+|+|.+. .+.-++.. + .+.+.|+.+.+. .+++....
T Consensus 167 Snn~f~~h~k~~L~G~s-d~~~~---~~~~~vT~h~N~f~~~~~R~Pr~r~----G--~~hv~NN~~~n~~~~~i~~~~- 235 (330)
T 2qy1_A 167 SYNYVYNYQKVALNGYS-DSDTK---NSAARTTYHHNRFENVESRVPLQRF----G--LSHIYNNYFNNVTTSGINVRM- 235 (330)
T ss_dssp ESCEEEEEEECCEESSS-TTCGG---GGGCEEEEESCEEEEEEECTTEEES----S--EEEEESCEEEEECSCSEEEET-
T ss_pred EcceeccCCeEEEECCC-Ccccc---CCCceEEEECcEEcCCCCCCCceec----c--eEEEEeeEEEcccceEeccCC-
Confidence 99999875544444431 11110 0125899999998653 12222221 1 477888888764 35554422
Q ss_pred cCCCceEEEEEEEeEEEcccCeeEE
Q 013402 317 IGRGGFIRNITVSDVYMENARKGIK 341 (443)
Q Consensus 317 ~~~~g~v~nI~~~ni~~~~~~~~i~ 341 (443)
+ ..|.+|++.+++...|+.
T Consensus 236 ---~---~~i~~e~N~F~~~~~p~~ 254 (330)
T 2qy1_A 236 ---G---GIAKIESNYFENIKNPVT 254 (330)
T ss_dssp ---T---CEEEEESCEEEEEESSEE
T ss_pred ---C---cEEEEEccEEECCCCcee
Confidence 1 357788888887666643
No 70
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=97.21 E-value=0.037 Score=54.28 Aligned_cols=45 Identities=20% Similarity=0.260 Sum_probs=30.2
Q ss_pred hHHHHHHHHHHhhhhccCCCeEEEECCCceEEEEeEe---ccccEEEEc
Q 013402 54 NTKAFREAIYRIQHLRRSGGTLLYVPPGVYLTGSFNL---TSHMTLYLA 99 (443)
Q Consensus 54 dt~aiq~Ai~~~~~~~~~gg~~V~ip~G~Y~~~~l~l---~s~~tl~~~ 99 (443)
+-..||+||+++........-+|+|.||+|.- .+.+ |.+++|.++
T Consensus 88 ~f~TIqeAVdaap~~~~~~r~vI~Ik~GvY~E-~V~Ip~~K~~ItL~G~ 135 (422)
T 3grh_A 88 THTTIQAAVDAAIIKRTNKRQYIAVMPGEYQG-TVYVPAAPGGITLYGT 135 (422)
T ss_dssp CBSSHHHHHHHHHTTCCSSCEEEEECSEEEES-CEEECCCSSCEEEEEC
T ss_pred CcCCHHHHHHhchhcCCCccEEEEEeCCeEee-eEEecCCCCcEEEEec
Confidence 45679999999841111234699999999974 3555 467777664
No 71
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=96.34 E-value=0.015 Score=56.96 Aligned_cols=74 Identities=12% Similarity=0.067 Sum_probs=56.2
Q ss_pred EEEEeecceEEE-eEEEecCCCceEEeeeeeeEEEEeEEEECCCCCCCCCeeccc------------CCccEEEEeeEEe
Q 013402 178 IEFMNSRSIIIS-NVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD------------SSSNVCIEDSYIS 244 (443)
Q Consensus 178 i~~~~~~nv~I~-~v~i~n~~~~~i~~~~~~~v~i~~~~I~~~~~~~n~DGi~~~------------~s~nv~I~n~~i~ 244 (443)
+++..|+++++. ++.+. .+|+||.|.+|+|...+ |-|.+. .++++.
T Consensus 198 IhPi~Cqnvt~r~gL~f~---------eSCrNV~IsnC~FsVGD-----dciaiksGk~~~~~~~~~~se~~~------- 256 (514)
T 2vbk_A 198 SKFIACQAGTCRVGLHFL---------GQCVSVSVSSCHFSRGN-----YSADESFGIRIQPQTYAWSSEAVR------- 256 (514)
T ss_dssp EEEESCEEEEEEEEEEEE---------SCCEEEEEESCEEECTT-----SCCTTCEEEEEECBCCTTTSSCBC-------
T ss_pred EeEeccCceecccCcccc---------CCCCeEEEeccEEecCc-----ceeeeecCceecccccCCcchhcc-------
Confidence 899999999988 66664 37999999999999864 444443 356665
Q ss_pred cCCceEEEccCccccccccCCCccc-EEEEEEEEeCC
Q 013402 245 TGDDLVAVKSGWDEYGIAYGHPSSG-ITIRRVTGSSP 280 (443)
Q Consensus 245 ~gdD~i~i~sg~~~~g~~~~~~~~n-i~i~n~~~~~~ 280 (443)
+.+|.+.|+.-. .+.+| +.|++|.|...
T Consensus 257 --hgav~igSE~m~------~Gvk~~v~v~~Clf~~t 285 (514)
T 2vbk_A 257 --SEAIILDSETMC------IGFKNAVYVHDCLDLHM 285 (514)
T ss_dssp --CEEEEEESSEEE------ESCSEEEEESCCEEEEE
T ss_pred --cccEEECchhhc------ccccccEEEEeeeccCC
Confidence 667888886332 34799 99999999875
No 72
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=95.65 E-value=0.6 Score=40.25 Aligned_cols=129 Identities=19% Similarity=0.231 Sum_probs=65.2
Q ss_pred eEEEEeEEEECCCCCCCCCeecccCCccEEEEeeEEec-CCceEEEccCccccccccCCCcccEEEEEEEEeCC-CceEE
Q 013402 208 NVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYIST-GDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP-FSGIA 285 (443)
Q Consensus 208 ~v~i~~~~I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~-gdD~i~i~sg~~~~g~~~~~~~~ni~i~n~~~~~~-~~gi~ 285 (443)
+.+++|+.|-.+ ..||||.. -+-+|+|+.+.. +.|++.+++ ...++|.+.-..+. +--+.
T Consensus 53 GaTLkNvIIG~~----~~dGIHC~--G~ctl~NVwwedVcEDA~T~kg------------~g~~~I~GGgA~~A~DKV~Q 114 (196)
T 3t9g_A 53 GANLKNVIIGAP----GCDGIHCY--GDNVVENVVWEDVGEDALTVKS------------EGVVEVIGGSAKEAADKVFQ 114 (196)
T ss_dssp TCEEEEEEECSC----CTTCEEEC--SSEEEEEEEESSCCSCSEEECS------------SEEEEEESCEEEEEEEEEEE
T ss_pred CCEEEEEEECCC----CcCcEEEc--CCEeEEEEEeeeeeceeeEEcC------------CCeEEEECCCccCCCceEEE
Confidence 345555555322 25777764 345677777766 777777774 23444544443332 11111
Q ss_pred EccccCCcEEEEEEEeeEEeCCceeEEEEeecCCCceEEEEEEEeEEEcccCeeEEEEcccCCCCCCCCCCCCCCeEEeE
Q 013402 286 VGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGI 365 (443)
Q Consensus 286 igs~~~~~v~nI~i~n~~~~~~~~gi~i~s~~~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nI 365 (443)
.. +--.+.|+|.++.+ .|-...+-.+ ...=++|.++|+++.+...++. ..+ .+.....+.|+
T Consensus 115 ~N-----g~Gtv~I~nF~~~~--~GKl~RSCGn-c~~~r~v~i~~v~~~n~k~~l~-rtd---------S~~~~~~~~n~ 176 (196)
T 3t9g_A 115 LN-----APCTFKVKNFTATN--IGKLVRQNGN-TTFKVVIYLEDVTLNNVKSCVA-KSD---------SPVSELWYHNL 176 (196)
T ss_dssp EC-----SSEEEEEEEEEEEE--EEEEEEECTT-CCSCEEEEEEEEEEEEEEEEEE-ECC---------CTTCEEEEEEE
T ss_pred EC-----CCceEEEeeEEEcc--CCEEEEcCCC-CCceeEEEEeCeEEeCCEEEEE-EcC---------CCCCEEEEecc
Confidence 11 11245566666553 3444444321 1223677777777777655432 221 12223467777
Q ss_pred EEEeEEE
Q 013402 366 TIKDVWG 372 (443)
Q Consensus 366 t~~nI~~ 372 (443)
..+|+.-
T Consensus 177 ~~~~~~~ 183 (196)
T 3t9g_A 177 NVNNCKT 183 (196)
T ss_dssp EEEEEEE
T ss_pred eecCCCc
Confidence 7777764
No 73
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=95.62 E-value=0.077 Score=53.83 Aligned_cols=144 Identities=10% Similarity=-0.010 Sum_probs=100.0
Q ss_pred eeEEEE----eecceEEEeEEEecC-CCceEEeeeeeeEEEEeEEEECCCCCCCCCeecccCCccEEEEeeEEecCC---
Q 013402 176 NLIEFM----NSRSIIISNVIFQNS-PFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGD--- 247 (443)
Q Consensus 176 ~~i~~~----~~~nv~I~~v~i~n~-~~~~i~~~~~~~v~i~~~~I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gd--- 247 (443)
..+++. ...+..|++-.+.+. ....+....+.+.+|++.++... ..||.+..+.+.+|++..|....
T Consensus 216 e~iR~G~h~m~s~~~~VenN~f~~~~gg~aim~skS~~n~i~~N~~~~~-----~ggi~l~~~~~s~I~~N~f~gN~~~~ 290 (506)
T 1dbg_A 216 GGIRIGYYRNDIGRCLVDSNLFMRQDSEAEIITSKSQENVYYGNTYLNC-----QGTMNFRHGDHQVAINNFYIGNDQRF 290 (506)
T ss_dssp CSEEECSSTTCBCCCEEESCEEEEECSSSEEEEEESBSCEEESCEEESC-----SSEEEEEECSSCEEESCEEEECSSSS
T ss_pred ccEEEEEEecccCCcEEECCEEEeccCcEEEEEEecCCEEEECCEEEcc-----cCcEEEeecCccEEECCEEECCcCcc
Confidence 345554 457888888777654 34556666666789999999873 45899888888899999987643
Q ss_pred --ceEEEccCccccccccCCCcccEEEEEEEEeCCCc-------eEEEcccc----CCcEEEEEEEeeEEeCCce-eEEE
Q 013402 248 --DLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-------GIAVGSET----SGGVENVLAEHINLYNVGV-GIHV 313 (443)
Q Consensus 248 --D~i~i~sg~~~~g~~~~~~~~ni~i~n~~~~~~~~-------gi~igs~~----~~~v~nI~i~n~~~~~~~~-gi~i 313 (443)
.||.+.. ++.+|+|++|.+... ||.+.... ...+++++|++++|.++.. ||.+
T Consensus 291 ~~~Gi~i~~-------------~~~~I~nN~f~~~~g~~~~~~~GI~i~~G~~~~~~~~~~~~~I~~Ntfi~n~~~gI~~ 357 (506)
T 1dbg_A 291 GYGGMFVWG-------------SRHVIACNYFELSETIKSRGNAALYLNPGAMASEHALAFDMLIANNAFINVNGYAIHF 357 (506)
T ss_dssp CBCCEEECS-------------BSCEEESCEEEESSBCGGGTSEEEEECCBCTTSTTCCCBSEEEESCEEESCSSEEEES
T ss_pred CceEEEEEC-------------CCCEEECCEEECCcCccccccccEEEecCCCccccccccCcEEECCEEECCccccEEE
Confidence 5666643 344999999887643 77775321 2346899999999999986 9999
Q ss_pred E----------eec-CCCceEEEEEEEeEEEcccC
Q 013402 314 K----------TNI-GRGGFIRNITVSDVYMENAR 337 (443)
Q Consensus 314 ~----------s~~-~~~g~v~nI~~~ni~~~~~~ 337 (443)
. ... .....=.|++|.|..+.+..
T Consensus 358 ~~~~~~~~~~~~g~~~~~~~p~~~~~~nN~i~~~~ 392 (506)
T 1dbg_A 358 NPLDERRKEYCAANRLKFETPHQLMLKGNLFFKDK 392 (506)
T ss_dssp STTHHHHHHHHHHTTCCCBCCCSEEEESCEEECCS
T ss_pred cccccccccccccccccccCCCcEEEEccEEEcCC
Confidence 7 110 01122357888888877654
No 74
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=95.37 E-value=0.62 Score=40.19 Aligned_cols=132 Identities=16% Similarity=0.159 Sum_probs=87.3
Q ss_pred ecceEEEeEEEecCCCceEEeeeeeeEEEEeEEEECCCCCCCCCeecccCCccEEEEeeEEecCCceEEEccCccccccc
Q 013402 183 SRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA 262 (443)
Q Consensus 183 ~~nv~I~~v~i~n~~~~~i~~~~~~~v~i~~~~I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~sg~~~~g~~ 262 (443)
-+..+|+++.|-.+...+||.. -+.+|+|+....-. .|.+.+.++..++|.+.-.++.+|-|--..+
T Consensus 51 e~GaTLkNvIIG~~~~dGIHC~--G~ctl~NVwwedVc----EDA~T~kg~g~~~I~GGgA~~A~DKV~Q~Ng------- 117 (196)
T 3t9g_A 51 EKGANLKNVIIGAPGCDGIHCY--GDNVVENVVWEDVG----EDALTVKSEGVVEVIGGSAKEAADKVFQLNA------- 117 (196)
T ss_dssp CTTCEEEEEEECSCCTTCEEEC--SSEEEEEEEESSCC----SCSEEECSSEEEEEESCEEEEEEEEEEEECS-------
T ss_pred cCCCEEEEEEECCCCcCcEEEc--CCEeEEEEEeeeee----ceeeEEcCCCeEEEECCCccCCCceEEEECC-------
Confidence 3578999999977778888875 36788888887643 6888888777888999998887776543333
Q ss_pred cCCCcccEEEEEEEEeCCCceEEEcccc-CCcEEEEEEEeeEEeCCceeEEEEeecCCCceEEEEEEEeEEEcccCe
Q 013402 263 YGHPSSGITIRRVTGSSPFSGIAVGSET-SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK 338 (443)
Q Consensus 263 ~~~~~~ni~i~n~~~~~~~~gi~igs~~-~~~v~nI~i~n~~~~~~~~gi~i~s~~~~~g~v~nI~~~ni~~~~~~~ 338 (443)
.-.+.|+|.+..+ .|--+-|.. ...-++|.++|+++.+....+ +++.. .-..+++.|+++.++..
T Consensus 118 ----~Gtv~I~nF~~~~--~GKl~RSCGnc~~~r~v~i~~v~~~n~k~~l-~rtdS----~~~~~~~~n~~~~~~~~ 183 (196)
T 3t9g_A 118 ----PCTFKVKNFTATN--IGKLVRQNGNTTFKVVIYLEDVTLNNVKSCV-AKSDS----PVSELWYHNLNVNNCKT 183 (196)
T ss_dssp ----SEEEEEEEEEEEE--EEEEEEECTTCCSCEEEEEEEEEEEEEEEEE-EECCC----TTCEEEEEEEEEEEEEE
T ss_pred ----CceEEEeeEEEcc--CCEEEEcCCCCCceeEEEEeCeEEeCCEEEE-EEcCC----CCCEEEEecceecCCCc
Confidence 3468888887754 222222110 123478999999998764444 33321 12456677777766543
No 75
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=95.03 E-value=0.39 Score=45.62 Aligned_cols=110 Identities=10% Similarity=0.051 Sum_probs=71.0
Q ss_pred eeeeEEEEeEEEECCCCC--CCCCeecccCCccEEEEeeEEecCCceEEEccCccccccccCCCcccEEEEEEEEeCCCc
Q 013402 205 YCSNVVIRYVTILAPADS--PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS 282 (443)
Q Consensus 205 ~~~~v~i~~~~I~~~~~~--~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~sg~~~~g~~~~~~~~ni~i~n~~~~~~~~ 282 (443)
.+++++++|++|.+.... ...-++.+ .++++.++||.|....|.+..+.+ + -.+++|++.+.-+
T Consensus 88 ~a~~f~~~~lt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g~QDTLy~~~~------------r-~~~~~c~I~G~vD 153 (317)
T 1xg2_A 88 VGQGFILQDICIQNTAGPAKDQAVALRV-GADMSVINRCRIDAYQDTLYAHSQ------------R-QFYRDSYVTGTVD 153 (317)
T ss_dssp CSTTCEEESCEEEECCCGGGCCCCSEEE-CCTTEEEESCEEECSTTCEEECSS------------E-EEEESCEEEESSS
T ss_pred ECCCEEEEEeEEecccCCccCceEEEEE-eCCcEEEEEeEeCccccceeecCc------------c-EEEEeeEEEecee
Confidence 678899999999986432 23445666 478899999999998888887753 3 3889999987532
Q ss_pred eEEEccccCCcEEEEEEEeeEEeCCc-----eeEEEEeec-CCCceEEEEEEEeEEEccc
Q 013402 283 GIAVGSETSGGVENVLAEHINLYNVG-----VGIHVKTNI-GRGGFIRNITVSDVYMENA 336 (443)
Q Consensus 283 gi~igs~~~~~v~nI~i~n~~~~~~~-----~gi~i~s~~-~~~g~v~nI~~~ni~~~~~ 336 (443)
+-+|.. ...|+||++.... .+ .|-... .....-....|.|+++...
T Consensus 154 -FIfG~~------~avf~~c~i~~~~~~~~~~~-~itA~~r~~~~~~~G~vf~~c~i~~~ 205 (317)
T 1xg2_A 154 -FIFGNA------AVVFQKCQLVARKPGKYQQN-MVTAQGRTDPNQATGTSIQFCNIIAS 205 (317)
T ss_dssp -CEEECC------EEEEESCEEEECCCSTTCCE-EEEEECCCCTTSCCEEEEESCEEEEC
T ss_pred -EEcCCc------eEEEeeeEEEEeccCCCCcc-EEEecCcCCCCCCcEEEEECCEEecC
Confidence 223432 3788999987532 12 222211 1112334566888888754
No 76
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=94.76 E-value=0.47 Score=41.04 Aligned_cols=58 Identities=19% Similarity=0.127 Sum_probs=25.5
Q ss_pred ceEEEeEEEecCCCceEEeeeeeeEEEEeEEEECCCCCCCCCeecccCCccEEEEeeEEecCCc
Q 013402 185 SIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDD 248 (443)
Q Consensus 185 nv~I~~v~i~n~~~~~i~~~~~~~v~i~~~~I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gdD 248 (443)
..+|+++.|-.+...+||... +.+|+|+....-. .|.+.+.++..++|.+.-.++.+|
T Consensus 49 GaTLkNvIIG~~~~dGIHC~G--~CtleNVwwedVc----EDA~T~k~~g~~~I~GGgA~~A~D 106 (197)
T 1ee6_A 49 GASLKNVVIGAPAADGVHCYG--DCTITNVIWEDVG----EDALTLKSSGTVNISGGAAYKAYD 106 (197)
T ss_dssp TEEEEEEEECSSCTTCEEEES--CEEEEEEEESSCC----SCSEEEEESEEEEEESCEEEEEEE
T ss_pred CCEEEEEEEcCCCcccEEEcC--ceeEEEEEeeecc----ccccEEcCCCeEEEECCCccCCCc
Confidence 455555555444444444432 2444444444321 344444433344444444444333
No 77
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=94.41 E-value=0.26 Score=46.86 Aligned_cols=111 Identities=12% Similarity=0.029 Sum_probs=74.0
Q ss_pred eeeeEEEEeEEEECCCCC--CCCCeecccCCccEEEEeeEEecCCceEEEccCccccccccCCCcccEEEEEEEEeCCCc
Q 013402 205 YCSNVVIRYVTILAPADS--PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS 282 (443)
Q Consensus 205 ~~~~v~i~~~~I~~~~~~--~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~sg~~~~g~~~~~~~~ni~i~n~~~~~~~~ 282 (443)
..++++++|++|.+.... ...-++.+ .++++.++||.|....|.+..+.+ + ..+++|++.+.-+
T Consensus 92 ~a~~f~~~nlt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g~QDTLy~~~~------------r-~~~~~c~I~G~vD 157 (319)
T 1gq8_A 92 VGAGFLARDITFQNTAGAAKHQAVALRV-GSDLSAFYRCDILAYQDSLYVHSN------------R-QFFINCFIAGTVD 157 (319)
T ss_dssp CSTTCEEEEEEEEECCCGGGCCCCSEEE-CCTTEEEEEEEEECSTTCEEECSS------------E-EEEESCEEEESSS
T ss_pred ECCCEEEEEeEeEccCCCcCCceEEEEe-cCCcEEEEEeEECccceeeeecCc------------c-EEEEecEEEeeee
Confidence 478999999999996532 23445666 489999999999998888888763 3 4899999988633
Q ss_pred eEEEccccCCcEEEEEEEeeEEeCCc-----eeEEEEeec-CCCceEEEEEEEeEEEcccC
Q 013402 283 GIAVGSETSGGVENVLAEHINLYNVG-----VGIHVKTNI-GRGGFIRNITVSDVYMENAR 337 (443)
Q Consensus 283 gi~igs~~~~~v~nI~i~n~~~~~~~-----~gi~i~s~~-~~~g~v~nI~~~ni~~~~~~ 337 (443)
=| +|.. ...|+||++.... .+ .|.... .....-..+.|.|+++....
T Consensus 158 FI-fG~~------~a~f~~c~i~~~~~~~~~~~-~itA~~r~~~~~~~G~vf~~c~i~~~~ 210 (319)
T 1gq8_A 158 FI-FGNA------AVVLQDCDIHARRPGSGQKN-MVTAQGRTDPNQNTGIVIQKSRIGATS 210 (319)
T ss_dssp CE-EESC------EEEEESCEEEECCCSTTCCE-EEEEECCCSTTCCCEEEEESCEEEECT
T ss_pred EE-ecCC------cEEEEeeEEEEecCCCCCce-EEEeCCCCCCCCCceEEEECCEEecCC
Confidence 22 3432 3789999997532 12 232211 11123345679999987643
No 78
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=92.88 E-value=1.5 Score=37.86 Aligned_cols=110 Identities=17% Similarity=0.255 Sum_probs=65.6
Q ss_pred eeEEEEeEEEECCCCCCCCCeecccCCccEEEEeeEEec-CCceEEEccCccccccccCCCcccEEEEEEEEeCC-CceE
Q 013402 207 SNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYIST-GDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP-FSGI 284 (443)
Q Consensus 207 ~~v~i~~~~I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~-gdD~i~i~sg~~~~g~~~~~~~~ni~i~n~~~~~~-~~gi 284 (443)
++.+++|+.|-.+ ..||||... +-+|+|+.+.. +.|++.+++ ...++|.+.-..+. +-=+
T Consensus 48 ~GaTLkNvIIG~~----~~dGIHC~G--~CtleNVwwedVcEDA~T~k~------------~g~~~I~GGgA~~A~DKV~ 109 (197)
T 1ee6_A 48 AGASLKNVVIGAP----AADGVHCYG--DCTITNVIWEDVGEDALTLKS------------SGTVNISGGAAYKAYDKVF 109 (197)
T ss_dssp TTEEEEEEEECSS----CTTCEEEES--CEEEEEEEESSCCSCSEEEEE------------SEEEEEESCEEEEEEEEEE
T ss_pred CCCEEEEEEEcCC----CcccEEEcC--ceeEEEEEeeeccccccEEcC------------CCeEEEECCCccCCCccEE
Confidence 4678999988543 489999864 58999999987 999999996 23455554443332 1111
Q ss_pred EEccccCCcEEEEEEEeeEEeCCceeEEEEeecCCCceEEEEEEEeEEEcccCeeEEE
Q 013402 285 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 342 (443)
Q Consensus 285 ~igs~~~~~v~nI~i~n~~~~~~~~gi~i~s~~~~~g~v~nI~~~ni~~~~~~~~i~i 342 (443)
... +--.+.|+|.++.+ .|=...+-.+ ...=++|.++|+++.+....+..
T Consensus 110 Q~N-----g~Gtv~I~nF~~~~--~GKl~RScGn-c~~~r~v~i~~v~~~~~k~~i~~ 159 (197)
T 1ee6_A 110 QIN-----AAGTINIRNFRADD--IGKLVRQNGG-TTYKVVMNVENCNISRVKDAILR 159 (197)
T ss_dssp EEC-----SSEEEEEESCEEEE--EEEEEEECTT-CCSCEEEEEESCEEEEEEEEEEE
T ss_pred Eec-----CCceEEEeeEEEcc--CCEEEEcCCC-CccceEEEEeceEEECceEEEEE
Confidence 111 11246666665542 3444444321 11236778888877776555433
No 79
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=92.52 E-value=4.6 Score=37.93 Aligned_cols=90 Identities=16% Similarity=0.059 Sum_probs=43.6
Q ss_pred eEEeccCcEEeCCCchhhhhhccCCCCCCCCeeEEEEeecceEEEeEEEecCCCceEEeeeeeeEEEEeEEEECCCCCCC
Q 013402 145 VVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 224 (443)
Q Consensus 145 v~I~G~~G~idG~G~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i~n~~~~~i~~~~~~~v~i~~~~I~~~~~~~n 224 (443)
-+|.| +++||.+..| ....... ......+|.+.. ..+++++.|-.....+||...- +.+|+|+....-.
T Consensus 125 ~~i~g--~t~Dgg~k~~-~~~c~~q-~E~q~~vF~le~--GatlkNvIiG~~~~dGIHC~~G-~CtleNVwwedVc---- 193 (344)
T 3b4n_A 125 ATFEN--RTVDCGGVTI-GTSCPND-SDKQKPLIILKN--ATVKNLRISASGGADGIHCDSG-NCTIENVIWEDIC---- 193 (344)
T ss_dssp EEEES--SEEECTTCEE-CCCCCTT-CSCCCCSEEEES--CEEEEEEECTTCCTTCEEEEES-EEEEEEEEESSCS----
T ss_pred eeEec--ceEcCCCcEE-CCCCCCc-cccCccEEEEcc--CcEEEEEEecCCCccceEEccC-CeeEEEEeehhcc----
Confidence 45666 5889887764 2111111 112233444443 3566666665555555555411 3555555555422
Q ss_pred CCeecccCCccEEEEeeEEecC
Q 013402 225 TDGIDPDSSSNVCIEDSYISTG 246 (443)
Q Consensus 225 ~DGi~~~~s~nv~I~n~~i~~g 246 (443)
.|.+.+. ...++|.+.-.++.
T Consensus 194 EDA~T~k-g~~~~I~GGgA~~a 214 (344)
T 3b4n_A 194 EDAATNN-GKTMTIVGGIAHNA 214 (344)
T ss_dssp SCSEEEC-SSEEEEESCEEEEC
T ss_pred cccceec-CceEEEECchhccc
Confidence 3455554 23445555444443
No 80
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=92.24 E-value=0.87 Score=43.70 Aligned_cols=54 Identities=11% Similarity=0.084 Sum_probs=31.7
Q ss_pred CccEEEEeeEEecCCceEEEccCccccccccCCCcccEEEEEEEEeCCCceEEEccccCCcEEEEEEEeeEEeC
Q 013402 233 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYN 306 (443)
Q Consensus 233 s~nv~I~n~~i~~gdD~i~i~sg~~~~g~~~~~~~~ni~i~n~~~~~~~~gi~igs~~~~~v~nI~i~n~~~~~ 306 (443)
++++.++||.|....|.+.... ....++||++.+. --+-+|.. ...|+||++..
T Consensus 139 ~d~~~f~~c~f~G~QDTLy~~~-------------gr~~~~~c~I~G~-vDFIFG~a------~a~f~~c~i~~ 192 (342)
T 2nsp_A 139 GDRAYFKDVSLVGYQATLYVSG-------------GRSFFSDCRISGT-VDFIFGDG------TALFNNCDLVS 192 (342)
T ss_dssp CBSEEEEEEEEECSTTCEEECS-------------SEEEEESCEEEES-EEEEEESS------EEEEESCEEEE
T ss_pred cCcEEEEeeEEecccceEEECC-------------CCEEEEcCEEEec-eEEEeCCc------eEEEecCEEEE
Confidence 6667777777777666666553 2466677777653 22223321 35677777653
No 81
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=91.56 E-value=1.5 Score=42.42 Aligned_cols=54 Identities=15% Similarity=0.085 Sum_probs=32.0
Q ss_pred CccEEEEeeEEecCCceEEEccCccccccccCCCcccEEEEEEEEeCCCceEEEccccCCcEEEEEEEeeEEe
Q 013402 233 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLY 305 (443)
Q Consensus 233 s~nv~I~n~~i~~gdD~i~i~sg~~~~g~~~~~~~~ni~i~n~~~~~~~~gi~igs~~~~~v~nI~i~n~~~~ 305 (443)
+++..+.||.|....|.+..+. .....+++|++++. -=+-+|.. ...|+||++.
T Consensus 165 ~D~~~f~~C~f~G~QDTLy~~~------------~gr~yf~~c~I~Gt-vDFIFG~a------~a~f~~c~i~ 218 (364)
T 3uw0_A 165 SDKARFKAVKLEGYQDTLYSKT------------GSRSYFSDCEISGH-VDFIFGSG------ITVFDNCNIV 218 (364)
T ss_dssp CEEEEEEEEEEECSBSCEEECT------------TCEEEEESCEEEES-EEEEEESS------EEEEESCEEE
T ss_pred CCeEEEEeeEEEecccceEeCC------------CCCEEEEcCEEEcC-CCEECCcc------eEEEEeeEEE
Confidence 5667777777777666666652 23566777777663 22333421 3567777775
No 82
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=83.18 E-value=9.7 Score=35.78 Aligned_cols=43 Identities=23% Similarity=0.240 Sum_probs=32.7
Q ss_pred eeEEEEeEEEECCCCCCCCCeecccCCccEEEEeeEEec-CCceEEEcc
Q 013402 207 SNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYIST-GDDLVAVKS 254 (443)
Q Consensus 207 ~~v~i~~~~I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~-gdD~i~i~s 254 (443)
+..+++|+.|-. ...||||.. ..+-+|+|+.+.. +.|++.++.
T Consensus 158 ~GatlkNvIiG~----~~~dGIHC~-~G~CtleNVwwedVcEDA~T~kg 201 (344)
T 3b4n_A 158 NATVKNLRISAS----GGADGIHCD-SGNCTIENVIWEDICEDAATNNG 201 (344)
T ss_dssp SCEEEEEEECTT----CCTTCEEEE-ESEEEEEEEEESSCSSCSEEECS
T ss_pred cCcEEEEEEecC----CCccceEEc-cCCeeEEEEeehhcccccceecC
Confidence 357788887743 247999986 2357899999887 899999984
No 83
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=83.06 E-value=0.3 Score=47.29 Aligned_cols=22 Identities=32% Similarity=0.309 Sum_probs=20.2
Q ss_pred ccccCCCcchhHHHHHHHHHHh
Q 013402 44 FGGVGDGKTLNTKAFREAIYRI 65 (443)
Q Consensus 44 yGa~gDg~tddt~aiq~Ai~~~ 65 (443)
=||+|||++|||+||..|+++.
T Consensus 4 ~~a~gdgvtddt~a~~~~l~~~ 25 (670)
T 3ju4_A 4 GSAKGDGVTDDTAALTSALNDT 25 (670)
T ss_dssp CCCCCEEEEECHHHHHHHHHHS
T ss_pred CcccCCCccCcHHHHHHHhccC
Confidence 4899999999999999999975
No 84
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=80.65 E-value=11 Score=36.96 Aligned_cols=20 Identities=20% Similarity=0.170 Sum_probs=12.1
Q ss_pred CccEEEEeeEEecCCceEEE
Q 013402 233 SSNVCIEDSYISTGDDLVAV 252 (443)
Q Consensus 233 s~nv~I~n~~i~~gdD~i~i 252 (443)
+.+..+.+|.|....|-+..
T Consensus 232 gDr~~fy~C~f~G~QDTLy~ 251 (422)
T 3grh_A 232 GDQVQINNVNILGRQNTFFV 251 (422)
T ss_dssp CSSEEEEEEEEECSTTCEEE
T ss_pred CCcEEEEeeEEEeecceeee
Confidence 45666666666665555554
No 85
>3riq_A Tailspike protein; right handed beta-helix, endorhamnosidase, lipopolysaccharide, viral protein; 1.50A {Siphovirus 9na}
Probab=69.64 E-value=83 Score=30.39 Aligned_cols=150 Identities=17% Similarity=0.207 Sum_probs=78.0
Q ss_pred CCCCeeEEEEeecceEEEeEEEecCCCceEEeeeeeeEEEEe----------EEEECCCCCCCCCe-------ecccCCc
Q 013402 172 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRY----------VTILAPADSPNTDG-------IDPDSSS 234 (443)
Q Consensus 172 ~~~~~~i~~~~~~nv~I~~v~i~n~~~~~i~~~~~~~v~i~~----------~~I~~~~~~~n~DG-------i~~~~s~ 234 (443)
+.-...+.+..|.+|.+++-.-. .-+..+..|+.|..++ +++.+-....+.-| ++..+++
T Consensus 142 Q~~~stL~I~~~~gv~v~~~~~~---m~~ylf~~c~~i~~~~p~~f~g~~~~ItFen~~s~~wg~GNyvIGG~~~YGS~S 218 (543)
T 3riq_A 142 QVAGATLRVNSANNIIFTHPEAT---MGGYLFTLCNHILVESPRNFIAWESGITFENHHTTAWGTGNKVVGGEIKYGSGS 218 (543)
T ss_dssp CCCCEEEEEESCEEEEEESCEEE---EEEEEEESCEEEEEECCCSEEEEEEEEEEECTTSSSCBCSCEEESCEEEECSSC
T ss_pred ccceeEEEEeccCceEEecCccc---hhhhhhhhhcccccCCCcccccccceEEEeccccCcccccceEecceeeccccc
Confidence 34455788888888777653321 1234455676665543 45555211111111 3344455
Q ss_pred cEEEEeeEEec----CCceE--EEcc------C----ccccccccCCCcccEEEEEEEEeCC-CceEEEccccCCc----
Q 013402 235 NVCIEDSYIST----GDDLV--AVKS------G----WDEYGIAYGHPSSGITIRRVTGSSP-FSGIAVGSETSGG---- 293 (443)
Q Consensus 235 nv~I~n~~i~~----gdD~i--~i~s------g----~~~~g~~~~~~~~ni~i~n~~~~~~-~~gi~igs~~~~~---- 293 (443)
-| +++|+ ++||= .+-+ | .+..|-. ..-..|+.++|.....+ .+|+-+++.+..+
T Consensus 219 ~v----~FlRNdGG~~hdGGVig~tsyR~GESGvKT~Q~~Vgg~-ssRnYnLqF~d~~~i~~~~DG~Dl~aD~g~pe~R~ 293 (543)
T 3riq_A 219 AV----LFIRNDGGDDHDGGVRDLISYRVGESGVKTYQNEIGGR-SARNYRLVFDNITTIQCYYDGIDVNADTGSPTERV 293 (543)
T ss_dssp SE----EEESBBCTTTTCCEEEEEEEESCSSCSSEECCSEETTE-ECCCBSCEEEEEEEESCSSCSCEECSCCSSCCCCS
T ss_pred eE----EEEEcCCCcCCCCCeEeeeeeccCCCcceeeecccCcc-ccceeeEEEeccceEEEeecceeccCCCCCCccCC
Confidence 55 45554 23432 2222 1 1111111 12268899999987776 8999998742210
Q ss_pred -------------EEEEEEEeeEEeCCceeEEEEeecCCCceEEEEEEEeE
Q 013402 294 -------------VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDV 331 (443)
Q Consensus 294 -------------v~nI~i~n~~~~~~~~gi~i~s~~~~~g~v~nI~~~ni 331 (443)
-.|=.|+|+...++ .|+.+. ++|.+++|+||+.+++
T Consensus 294 ~D~~laqYp~~qLP~nHii~Ni~~~~~-lGVG~~-~DG~~~~v~ni~~~dc 342 (543)
T 3riq_A 294 DDYTLAEYPWFQLPTQHIIRNIITRDC-MGIGAW-WDGQKNIIDNVVTYEA 342 (543)
T ss_dssp SSCCTTTSCTTCCCCCCEEEEEEEESC-SSCSSE-ECSSSCEEEEEEEESC
T ss_pred CCcchhhCchhhCchhhhhhhhheecc-ceeeee-ecCCCCeEeeEEeecc
Confidence 22334555555554 444443 3566788888886654
No 86
>2vfm_A Bifunctional tail protein; P22 tailspike protein, salmonella bacteriophage P22, protein folding, protein stability; 1.50A {Enterobacteria phage P22} PDB: 2vfp_A 2vfo_A 2vfq_A 2vfn_A 1tsp_A 1qrb_A 1qq1_A 1qrc_A 1tyu_A* 1tyv_A 1tyw_A* 1tyx_A* 1qa2_A 1clw_A 1qa3_A 1qa1_A
Probab=55.57 E-value=22 Score=33.52 Aligned_cols=63 Identities=25% Similarity=0.447 Sum_probs=40.5
Q ss_pred cccEEEEEEEEeCC-CceEEEccccC--------C-----------cEEEEEEEeeEEeCCceeEEEEeecCCCceEEEE
Q 013402 267 SSGITIRRVTGSSP-FSGIAVGSETS--------G-----------GVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNI 326 (443)
Q Consensus 267 ~~ni~i~n~~~~~~-~~gi~igs~~~--------~-----------~v~nI~i~n~~~~~~~~gi~i~s~~~~~g~v~nI 326 (443)
..|+.+++.....+ ++|+.+|+.+. + --.|=+|.|+.+.++ -|+.++. +|.+++|+||
T Consensus 269 nYNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gs-LGVG~GM-DG~G~YVSNi 346 (559)
T 2vfm_A 269 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGA-LGVGFGM-DGKGMYVSNI 346 (559)
T ss_dssp CBSCEEEEEEEESCSSCSEEECCSCSSSCCSCCTTSCCTTTSCTTCCCCCCEEEEEEEECC-SSEEEEE-EEESCEEEEE
T ss_pred ccceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecc-cceeeee-cCCCceEeee
Confidence 67888888887777 88888887521 1 023556666666665 3444443 2457788887
Q ss_pred EEEeE
Q 013402 327 TVSDV 331 (443)
Q Consensus 327 ~~~ni 331 (443)
++++|
T Consensus 347 tv~DC 351 (559)
T 2vfm_A 347 TVEDC 351 (559)
T ss_dssp EEESC
T ss_pred Eehhc
Confidence 77765
No 87
>2vfm_A Bifunctional tail protein; P22 tailspike protein, salmonella bacteriophage P22, protein folding, protein stability; 1.50A {Enterobacteria phage P22} PDB: 2vfp_A 2vfo_A 2vfq_A 2vfn_A 1tsp_A 1qrb_A 1qq1_A 1qrc_A 1tyu_A* 1tyv_A 1tyw_A* 1tyx_A* 1qa2_A 1clw_A 1qa3_A 1qa1_A
Probab=53.98 E-value=78 Score=29.92 Aligned_cols=56 Identities=16% Similarity=0.212 Sum_probs=33.3
Q ss_pred ccEEEEEEEEeCCCceEEEcccc-CCcEEEEEEEeeEEeCCceeEEEEeecCCCceEEEEEEEeEEEccc
Q 013402 268 SGITIRRVTGSSPFSGIAVGSET-SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENA 336 (443)
Q Consensus 268 ~ni~i~n~~~~~~~~gi~igs~~-~~~v~nI~i~n~~~~~~~~gi~i~s~~~~~g~v~nI~~~ni~~~~~ 336 (443)
.|-.|.|..+.+. -|+.+|... .+.++||++++|- ..|..+.++ +-+|.||++-++
T Consensus 317 ~NHliDnllv~gs-LGVG~GMDG~G~YVSNitv~DCA----GsG~~~~t~--------~~~FtNi~vID~ 373 (559)
T 2vfm_A 317 LNHLIDNLLVRGA-LGVGFGMDGKGMYVSNITVEDCA----GSGAYLLTH--------ESVFTNIAIIDT 373 (559)
T ss_dssp CCCEEEEEEEECC-SSEEEEEEEESCEEEEEEEESCS----SEEEEEEEE--------SCEEEEEEEESC
T ss_pred chhhhhhheeecc-cceeeeecCCCceEeeeEehhcc----CcceEEeec--------cceeeeeEEEec
Confidence 4667888888775 444444332 2457777777773 356666554 224666666544
No 88
>2v5i_A Salmonella typhimurium DB7155 bacteriophage DET7 tailspike; O-antigen binding and hydrolysis, beta-helix, viral protein; 1.60A {Bacteriophage}
Probab=53.87 E-value=77 Score=29.95 Aligned_cols=56 Identities=20% Similarity=0.321 Sum_probs=33.4
Q ss_pred ccEEEEEEEEeCCCceEEEcccc-CCcEEEEEEEeeEEeCCceeEEEEeecCCCceEEEEEEEeEEEccc
Q 013402 268 SGITIRRVTGSSPFSGIAVGSET-SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENA 336 (443)
Q Consensus 268 ~ni~i~n~~~~~~~~gi~igs~~-~~~v~nI~i~n~~~~~~~~gi~i~s~~~~~g~v~nI~~~ni~~~~~ 336 (443)
.|-.|.|..+.+. -|+.+|... .+.++||++++|- ..|..+.++ +-+|.||++-++
T Consensus 320 ~NHliDnllv~gs-LGVG~GMDG~G~YVSNitv~DCA----GsG~~~~t~--------~~~FtNi~vID~ 376 (559)
T 2v5i_A 320 NNHLVDNILVMNS-LGVGLGMDGSGGYVSNVTVQDCA----GAGMLAHTY--------NRVFSNITVIDC 376 (559)
T ss_dssp CCCEEEEEEEESC-SSEEEEEEEESCEEEEEEEESCS----SEEEEEEEE--------SCEEEEEEEESC
T ss_pred chhhhhhheeecc-cceeeeecCCCceEeeeEehhcc----CcceEEeec--------cceeeeeEEEec
Confidence 4667888888775 444444332 2457777777773 356666554 225666666544
No 89
>3riq_A Tailspike protein; right handed beta-helix, endorhamnosidase, lipopolysaccharide, viral protein; 1.50A {Siphovirus 9na}
Probab=53.51 E-value=95 Score=29.98 Aligned_cols=15 Identities=13% Similarity=0.087 Sum_probs=7.5
Q ss_pred eeeeEEEEeEEEECC
Q 013402 205 YCSNVVIRYVTILAP 219 (443)
Q Consensus 205 ~~~~v~i~~~~I~~~ 219 (443)
+|-|..+++.....+
T Consensus 261 RnYnLqF~d~~~i~~ 275 (543)
T 3riq_A 261 RNYRLVFDNITTIQC 275 (543)
T ss_dssp CCBSCEEEEEEEESC
T ss_pred ceeeEEEeccceEEE
Confidence 344455555555544
No 90
>2v5i_A Salmonella typhimurium DB7155 bacteriophage DET7 tailspike; O-antigen binding and hydrolysis, beta-helix, viral protein; 1.60A {Bacteriophage}
Probab=53.02 E-value=23 Score=33.49 Aligned_cols=64 Identities=30% Similarity=0.553 Sum_probs=45.0
Q ss_pred cccEEEEEEEEeCC-CceEEEccccC--------C-----------cEEEEEEEeeEEeCCceeEEEEeecCCCceEEEE
Q 013402 267 SSGITIRRVTGSSP-FSGIAVGSETS--------G-----------GVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNI 326 (443)
Q Consensus 267 ~~ni~i~n~~~~~~-~~gi~igs~~~--------~-----------~v~nI~i~n~~~~~~~~gi~i~s~~~~~g~v~nI 326 (443)
..|+.+++.....+ ++|+.+|+.+. + --.|=+|.|+.+.++ -|+.++. +|.+++|+||
T Consensus 272 nYNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gs-LGVG~GM-DG~G~YVSNi 349 (559)
T 2v5i_A 272 NYNLQFRDSVALSPVWDGFDLGSDPGMAPEPDRPGDLPVSEYPFHQLPNNHLVDNILVMNS-LGVGLGM-DGSGGYVSNV 349 (559)
T ss_dssp CBSCEEEEEEEESCSSCSEECCSSCTTCCSSSCTTSCCTTTSCTTCCCCCCEEEEEEEESC-SSEEEEE-EEESCEEEEE
T ss_pred ccceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecc-cceeeee-cCCCceEeee
Confidence 68999999998888 99999988521 1 023556777777765 4555543 3457899888
Q ss_pred EEEeEE
Q 013402 327 TVSDVY 332 (443)
Q Consensus 327 ~~~ni~ 332 (443)
++++|.
T Consensus 350 tv~DCA 355 (559)
T 2v5i_A 350 TVQDCA 355 (559)
T ss_dssp EEESCS
T ss_pred Eehhcc
Confidence 888763
No 91
>2xc1_A Bifunctional tail protein; hydrolase, endoglycosidase, salmonella phage P22; HET: PE4; 1.65A {Enterobacteria phage P22} PDB: 1lkt_A
Probab=47.30 E-value=34 Score=33.70 Aligned_cols=63 Identities=25% Similarity=0.447 Sum_probs=39.0
Q ss_pred cccEEEEEEEEeCC-CceEEEccccC--------C-----------cEEEEEEEeeEEeCCceeEEEEeecCCCceEEEE
Q 013402 267 SSGITIRRVTGSSP-FSGIAVGSETS--------G-----------GVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNI 326 (443)
Q Consensus 267 ~~ni~i~n~~~~~~-~~gi~igs~~~--------~-----------~v~nI~i~n~~~~~~~~gi~i~s~~~~~g~v~nI 326 (443)
..|+.+++.....+ ++|+.+|+.+. + --.|=+|.|+.+.++ -|+.++. +|.+++|+||
T Consensus 376 nynlqfrds~~~~pvwdgfdlg~d~~m~pe~drpgd~p~~~yp~h~lp~nhlidn~~v~~s-lgvg~gm-dg~g~yvsni 453 (666)
T 2xc1_A 376 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGA-LGVGFGM-DGKGMYVSNI 453 (666)
T ss_dssp CBSCEEEEEEEECCSSCSEEECCSCSSCTTCCCTTSCCTTTSCTTCCCCCCEEEEEEEESC-SSEEEEE-EEESCEEEEE
T ss_pred ccceeeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecc-cceeeee-cCCCceEeee
Confidence 57888888887777 88888877521 1 023455666666655 3444433 2446778777
Q ss_pred EEEeE
Q 013402 327 TVSDV 331 (443)
Q Consensus 327 ~~~ni 331 (443)
++++|
T Consensus 454 tv~dc 458 (666)
T 2xc1_A 454 TVEDC 458 (666)
T ss_dssp EEESC
T ss_pred Eehhc
Confidence 77765
No 92
>2xc1_A Bifunctional tail protein; hydrolase, endoglycosidase, salmonella phage P22; HET: PE4; 1.65A {Enterobacteria phage P22} PDB: 1lkt_A
Probab=46.03 E-value=1.1e+02 Score=30.22 Aligned_cols=91 Identities=18% Similarity=0.148 Sum_probs=48.4
Q ss_pred CccEEEEeeEEec-CCceEEEccCccc------cc--cccCCC----cccEEEEEEEEeCCCceEEEcccc-CCcEEEEE
Q 013402 233 SSNVCIEDSYIST-GDDLVAVKSGWDE------YG--IAYGHP----SSGITIRRVTGSSPFSGIAVGSET-SGGVENVL 298 (443)
Q Consensus 233 s~nv~I~n~~i~~-gdD~i~i~sg~~~------~g--~~~~~~----~~ni~i~n~~~~~~~~gi~igs~~-~~~v~nI~ 298 (443)
+-|..++++.... =.|++.+++..+. .| .....| -.|-.|.|..+.+. -|+.+|... .+.++||+
T Consensus 376 nynlqfrds~~~~pvwdgfdlg~d~~m~pe~drpgd~p~~~yp~h~lp~nhlidn~~v~~s-lgvg~gmdg~g~yvsnit 454 (666)
T 2xc1_A 376 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGA-LGVGFGMDGKGMYVSNIT 454 (666)
T ss_dssp CBSCEEEEEEEECCSSCSEEECCSCSSCTTCCCTTSCCTTTSCTTCCCCCCEEEEEEEESC-SSEEEEEEEESCEEEEEE
T ss_pred ccceeeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecc-cceeeeecCCCceEeeeE
Confidence 3456666666544 5566666653111 01 111122 34667888888775 444444432 24577777
Q ss_pred EEeeEEeCCceeEEEEeecCCCceEEEEEEEeEEEccc
Q 013402 299 AEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENA 336 (443)
Q Consensus 299 i~n~~~~~~~~gi~i~s~~~~~g~v~nI~~~ni~~~~~ 336 (443)
+++|- ..|..+.++ +-+|.||++-++
T Consensus 455 v~dca----g~g~~~~~~--------~~~ftni~vid~ 480 (666)
T 2xc1_A 455 VEDCA----GSGAYLLTH--------ESVFTNIAIIDT 480 (666)
T ss_dssp EESCS----SEEEEEEEE--------SCEEEEEEEESC
T ss_pred ehhcc----CcceEEeec--------cceeeeeEEEec
Confidence 77773 356666554 224666666544
Done!