BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013404
(443 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 222 bits (566), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 126/299 (42%), Positives = 184/299 (61%), Gaps = 7/299 (2%)
Query: 80 HPTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDK- 138
H + + EL+ A++NF +ILG GGFG+V+KG L+DGT VA+KRL QG +
Sbjct: 21 HLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGEL 80
Query: 139 EFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDW 198
+F EVEM+S HRNL++L G+ + ++ LL Y + NGS+ S L LDW
Sbjct: 81 QFQTEVEMISMAVHRNLLRLRGFCMT--PTERLLVYPYMANGSVASCLRERPESQPPLDW 138
Query: 199 ETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTN 258
R +IAL +ARGLAYLH+ P +IHRD KA+NILL+ F A V DFGLAK + +
Sbjct: 139 PKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM-DYKDX 197
Query: 259 YLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQEN--LV 316
++ V GT G++APEY TG K+DV+ YGV+LLEL+TG++ D+++ + ++ L+
Sbjct: 198 HVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 257
Query: 317 TWARPILRDKDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLK 375
W + +L++K +LE L D L G Y E+ ++ +A C +RP M EVV+ L+
Sbjct: 258 DWVKGLLKEK-KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 218 bits (555), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 124/299 (41%), Positives = 182/299 (60%), Gaps = 7/299 (2%)
Query: 80 HPTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDK- 138
H + + EL+ A++NF +ILG GGFG+V+KG L+DG VA+KRL QG +
Sbjct: 13 HLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGEL 72
Query: 139 EFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDW 198
+F EVEM+S HRNL++L G+ + ++ LL Y + NGS+ S L LDW
Sbjct: 73 QFQTEVEMISMAVHRNLLRLRGFCMT--PTERLLVYPYMANGSVASCLRERPESQPPLDW 130
Query: 199 ETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTN 258
R +IAL +ARGLAYLH+ P +IHRD KA+NILL+ F A V DFGLAK + +
Sbjct: 131 PKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM-DYKDX 189
Query: 259 YLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQEN--LV 316
++ V G G++APEY TG K+DV+ YGV+LLEL+TG++ D+++ + ++ L+
Sbjct: 190 HVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 249
Query: 317 TWARPILRDKDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLK 375
W + +L++K +LE L D L G Y E+ ++ +A C +RP M EVV+ L+
Sbjct: 250 DWVKGLLKEK-KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 209 bits (533), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/292 (41%), Positives = 172/292 (58%), Gaps = 6/292 (2%)
Query: 91 ELKEATNNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRL 150
+L+EATNNF+ ++G G FG+V+KGVL DG VA+KR T QG +EF E+E LS
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
H +LV L+G+ R+ + +L Y+ + NG+L+ L+G + WE R++I + AAR
Sbjct: 93 RHPHLVSLIGFCDERN--EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
GL YLH + +IHRD K+ NILL+ NF K+ DFG++K+ E +L V GT GY
Sbjct: 151 GLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGY 207
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRLE 330
+ PEY + G L KSDVYS+GVVL E+L R + S P NL WA + +LE
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVES-HNNGQLE 266
Query: 331 ELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMVQRVIE 382
++ DP L K E + A C+A + RP+MG+V+ L+ R+ E
Sbjct: 267 QIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQE 318
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 209 bits (532), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 121/292 (41%), Positives = 172/292 (58%), Gaps = 6/292 (2%)
Query: 91 ELKEATNNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRL 150
+L+EATNNF+ ++G G FG+V+KGVL DG VA+KR T QG +EF E+E LS
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
H +LV L+G+ R+ + +L Y+ + NG+L+ L+G + WE R++I + AAR
Sbjct: 93 RHPHLVSLIGFCDERN--EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
GL YLH + +IHRD K+ NILL+ NF K+ DFG++K+ E +L V GT GY
Sbjct: 151 GLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGY 207
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRLE 330
+ PEY + G L KSDVYS+GVVL E+L R + S P NL WA + +LE
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVES-HNNGQLE 266
Query: 331 ELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMVQRVIE 382
++ DP L K E + A C+A + RP+MG+V+ L+ R+ E
Sbjct: 267 QIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQE 318
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/306 (35%), Positives = 177/306 (57%), Gaps = 23/306 (7%)
Query: 82 TSTRF--LAYEELKEATNNFE--PASI----LGEGGFGRVFKGVLSDGTAVAIKRLTC-- 131
+ TRF ++ ELK TNNF+ P S+ +GEGGFG V+KG +++ T VA+K+L
Sbjct: 8 SDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMV 66
Query: 132 --GGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGP 189
++ ++F E++++++ H NLV+L+G+ S D L Y +PNGSL L
Sbjct: 67 DITTEELKQQFDQEIKVMAKCQHENLVELLGF--SSDGDDLCLVYVYMPNGSLLDRL-SC 123
Query: 190 LGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLA 249
L L W R KIA AA G+ +LHE+ IHRD K++NILL+ F AK++DFGLA
Sbjct: 124 LDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA 180
Query: 250 KQAPEGRTNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
+ + + + +R++GT Y+APE A+ G + KSD+YS+GVVLLE++TG VD +
Sbjct: 181 RASEKFAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHRE 239
Query: 310 SGQENLVTWARPILRDKDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGE 369
+ L+ I ++ +E+ D ++ + ++A+ C+ + N+RP + +
Sbjct: 240 P--QLLLDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKK 296
Query: 370 VVQSLK 375
V Q L+
Sbjct: 297 VQQLLQ 302
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 110/306 (35%), Positives = 176/306 (57%), Gaps = 23/306 (7%)
Query: 82 TSTRF--LAYEELKEATNNFE--PASI----LGEGGFGRVFKGVLSDGTAVAIKRLTC-- 131
+ TRF ++ ELK TNNF+ P S+ +GEGGFG V+KG +++ T VA+K+L
Sbjct: 8 SDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMV 66
Query: 132 --GGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGP 189
++ ++F E++++++ H NLV+L+G+ S D L Y +PNGSL L
Sbjct: 67 DITTEELKQQFDQEIKVMAKCQHENLVELLGF--SSDGDDLCLVYVYMPNGSLLDRL-SC 123
Query: 190 LGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLA 249
L L W R KIA AA G+ +LHE+ IHRD K++NILL+ F AK++DFGLA
Sbjct: 124 LDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA 180
Query: 250 KQAPEGRTNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
+ + + + R++GT Y+APE A+ G + KSD+YS+GVVLLE++TG VD +
Sbjct: 181 RASEKFAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHRE 239
Query: 310 SGQENLVTWARPILRDKDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGE 369
+ L+ I ++ +E+ D ++ + ++A+ C+ + N+RP + +
Sbjct: 240 P--QLLLDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKK 296
Query: 370 VVQSLK 375
V Q L+
Sbjct: 297 VQQLLQ 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 162 bits (409), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 110/306 (35%), Positives = 176/306 (57%), Gaps = 23/306 (7%)
Query: 82 TSTRF--LAYEELKEATNNFE--PASI----LGEGGFGRVFKGVLSDGTAVAIKRLTC-- 131
+ TRF ++ ELK TNNF+ P S+ +GEGGFG V+KG +++ T VA+K+L
Sbjct: 2 SDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMV 60
Query: 132 --GGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGP 189
++ ++F E++++++ H NLV+L+G+ S D L Y +PNGSL L
Sbjct: 61 DITTEELKQQFDQEIKVMAKCQHENLVELLGF--SSDGDDLCLVYVYMPNGSLLDRL-SC 117
Query: 190 LGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLA 249
L L W R KIA AA G+ +LHE+ IHRD K++NILL+ F AK++DFGLA
Sbjct: 118 LDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA 174
Query: 250 KQAPEGRTNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
+ + + + R++GT Y+APE A+ G + KSD+YS+GVVLLE++TG VD +
Sbjct: 175 RASEKFAQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHRE 233
Query: 310 SGQENLVTWARPILRDKDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGE 369
+ L+ I ++ +E+ D ++ + ++A+ C+ + N+RP + +
Sbjct: 234 P--QLLLDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKK 290
Query: 370 VVQSLK 375
V Q L+
Sbjct: 291 VQQLLQ 296
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 98/234 (41%), Positives = 140/234 (59%), Gaps = 20/234 (8%)
Query: 84 TRF--LAYEELKEATNNFE--PASI----LGEGGFGRVFKGVLSDGTAVAIKRLTC---- 131
TRF ++ ELK TNNF+ P S+ GEGGFG V+KG +++ T VA+K+L
Sbjct: 1 TRFHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDI 59
Query: 132 GGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLG 191
++ ++F E+++ ++ H NLV+L+G+ S D L Y PNGSL L L
Sbjct: 60 TTEELKQQFDQEIKVXAKCQHENLVELLGF--SSDGDDLCLVYVYXPNGSLLDRL-SCLD 116
Query: 192 VNCHLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQ 251
L W R KIA AA G+ +LHE+ IHRD K++NILL+ F AK++DFGLA+
Sbjct: 117 GTPPLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARA 173
Query: 252 APEGRTNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 305
+ + +R++GT Y APE A+ G + KSD+YS+GVVLLE++TG VD
Sbjct: 174 SEKFAQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVD 226
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 142/295 (48%), Gaps = 42/295 (14%)
Query: 95 ATNNFEPASILGEGGFGRVFKG-VLSDGTAVAIKRLTCGGQQGD-------KEFLVEVEM 146
A N E +G+GGFG V KG ++ D + VAIK L G +G+ +EF EV +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 147 LSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIAL 206
+S L+H N+VKL G + + E VP G L H L + W ++++ L
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR----MVMEFVPCGDL---YHRLLDKAHPIKWSVKLRLML 129
Query: 207 DAARGLAYLHEDSQPCVIHRDFKASNILLEN-----NFHAKVADFGLAKQAPEGRTNYLS 261
D A G+ Y+ ++ P ++HRD ++ NI L++ AKVADFGL++Q+ +
Sbjct: 130 DIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSG--- 185
Query: 262 TRVMGTFGYVAPEY--AMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWA 319
++G F ++APE A K+D YS+ ++L +LTG P D G+ +
Sbjct: 186 --LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD-EYSYGKIKFINMI 242
Query: 320 RPILRDKDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSL 374
R EE P + P++ R+ + C + + +RP +V+ L
Sbjct: 243 R---------EEGLRPTI----PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 113/215 (52%), Gaps = 16/215 (7%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
LG G FG V+ G + T VA+K L G D FL E ++ +L H+ LV+L Y+
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL---YAV 82
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ E + NGSL +L P G+ ++ + +A A G+A++ E + I
Sbjct: 83 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---YI 137
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMTGHLL 282
HRD +A+NIL+ + K+ADFGLA+ + N + R F + APE G
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIED---NEYTAREGAKFPIKWTAPEAINYGTFT 194
Query: 283 VKSDVYSYGVVLLELLT-GRKPV-DMSQPSGQENL 315
+KSDV+S+G++L E++T GR P M+ P +NL
Sbjct: 195 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 229
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 113/215 (52%), Gaps = 16/215 (7%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
LG G FG V+ G + T VA+K L G D FL E ++ +L H+ LV+L Y+
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL---YAV 81
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ E + NGSL +L P G+ ++ + +A A G+A++ E + I
Sbjct: 82 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---YI 136
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMTGHLL 282
HRD +A+NIL+ + K+ADFGLA+ + N + R F + APE G
Sbjct: 137 HRDLRAANILVSDTLSCKIADFGLARLIED---NEYTAREGAKFPIKWTAPEAINYGTFT 193
Query: 283 VKSDVYSYGVVLLELLT-GRKPV-DMSQPSGQENL 315
+KSDV+S+G++L E++T GR P M+ P +NL
Sbjct: 194 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 228
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 113/215 (52%), Gaps = 16/215 (7%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
LG G FG V+ G + T VA+K L G D FL E ++ +L H+ LV+L Y+
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL---YAV 82
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ E + NGSL +L P G+ ++ + +A A G+A++ E + I
Sbjct: 83 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---YI 137
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMTGHLL 282
HRD +A+NIL+ + K+ADFGLA+ + N + R F + APE G
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIED---NEXTAREGAKFPIKWTAPEAINYGTFT 194
Query: 283 VKSDVYSYGVVLLELLT-GRKPVD-MSQPSGQENL 315
+KSDV+S+G++L E++T GR P M+ P +NL
Sbjct: 195 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 229
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 113/215 (52%), Gaps = 16/215 (7%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
LG G FG V+ G + T VA+K L G D FL E ++ +L H+ LV+L Y+
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL---YAV 85
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ E + NGSL +L P G+ ++ + +A A G+A++ E + I
Sbjct: 86 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---YI 140
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMTGHLL 282
HRD +A+NIL+ + K+ADFGLA+ + N + R F + APE G
Sbjct: 141 HRDLRAANILVSDTLSCKIADFGLARLIED---NEXTAREGAKFPIKWTAPEAINYGTFT 197
Query: 283 VKSDVYSYGVVLLELLT-GRKPVD-MSQPSGQENL 315
+KSDV+S+G++L E++T GR P M+ P +NL
Sbjct: 198 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 232
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 113/215 (52%), Gaps = 16/215 (7%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
LG G FG V+ G + T VA+K L G D FL E ++ +L H+ LV+L Y+
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL---YAV 84
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ E + NGSL +L P G+ ++ + +A A G+A++ E + I
Sbjct: 85 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---YI 139
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMTGHLL 282
HRD +A+NIL+ + K+ADFGLA+ + N + R F + APE G
Sbjct: 140 HRDLRAANILVSDTLSCKIADFGLARLIED---NEXTAREGAKFPIKWTAPEAINYGTFT 196
Query: 283 VKSDVYSYGVVLLELLT-GRKPVD-MSQPSGQENL 315
+KSDV+S+G++L E++T GR P M+ P +NL
Sbjct: 197 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 231
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 113/215 (52%), Gaps = 16/215 (7%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
LG G FG V+ G + T VA+K L G D FL E ++ +L H+ LV+L Y+
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL---YAV 76
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ E + NGSL +L P G+ ++ + +A A G+A++ E + I
Sbjct: 77 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---YI 131
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMTGHLL 282
HRD +A+NIL+ + K+ADFGLA+ + N + R F + APE G
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIED---NEXTAREGAKFPIKWTAPEAINYGTFT 188
Query: 283 VKSDVYSYGVVLLELLT-GRKPVD-MSQPSGQENL 315
+KSDV+S+G++L E++T GR P M+ P +NL
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 113/215 (52%), Gaps = 16/215 (7%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
LG G FG V+ G + T VA+K L G D FL E ++ +L H+ LV+L Y+
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL---YAV 77
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ E + NGSL +L P G+ ++ + +A A G+A++ E + I
Sbjct: 78 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---YI 132
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMTGHLL 282
HRD +A+NIL+ + K+ADFGLA+ + N + R F + APE G
Sbjct: 133 HRDLRAANILVSDTLSCKIADFGLARLIED---NEXTAREGAKFPIKWTAPEAINYGTFT 189
Query: 283 VKSDVYSYGVVLLELLT-GRKPV-DMSQPSGQENL 315
+KSDV+S+G++L E++T GR P M+ P +NL
Sbjct: 190 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 224
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 113/215 (52%), Gaps = 16/215 (7%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
LG G FG V+ G + T VA+K L G D FL E ++ +L H+ LV+L Y+
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL---YAV 76
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ E + NGSL +L P G+ ++ + +A A G+A++ E + I
Sbjct: 77 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---YI 131
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMTGHLL 282
HRD +A+NIL+ + K+ADFGLA+ + N + R F + APE G
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIED---NEXTAREGAKFPIKWTAPEAINYGTFT 188
Query: 283 VKSDVYSYGVVLLELLT-GRKPV-DMSQPSGQENL 315
+KSDV+S+G++L E++T GR P M+ P +NL
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 113/215 (52%), Gaps = 16/215 (7%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
LG G FG V+ G + T VA+K L G D FL E ++ +L H+ LV+L Y+
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL---YAV 78
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ E + NGSL +L P G+ ++ + +A A G+A++ E + I
Sbjct: 79 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---YI 133
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMTGHLL 282
HRD +A+NIL+ + K+ADFGLA+ + N + R F + APE G
Sbjct: 134 HRDLRAANILVSDTLSCKIADFGLARLIED---NEXTAREGAKFPIKWTAPEAINYGTFT 190
Query: 283 VKSDVYSYGVVLLELLT-GRKPVD-MSQPSGQENL 315
+KSDV+S+G++L E++T GR P M+ P +NL
Sbjct: 191 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 225
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 113/215 (52%), Gaps = 16/215 (7%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
LG G FG V+ G + T VA+K L G D FL E ++ +L H+ LV+L Y+
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL---YAV 86
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ E + NGSL +L P G+ ++ + +A A G+A++ E + I
Sbjct: 87 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---YI 141
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMTGHLL 282
HRD +A+NIL+ + K+ADFGLA+ + N + R F + APE G
Sbjct: 142 HRDLRAANILVSDTLSCKIADFGLARLIED---NEYTAREGAKFPIKWTAPEAINYGTFT 198
Query: 283 VKSDVYSYGVVLLELLT-GRKPVD-MSQPSGQENL 315
+KSDV+S+G++L E++T GR P M+ P +NL
Sbjct: 199 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 233
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 113/215 (52%), Gaps = 16/215 (7%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
LG G FG V+ G + T VA+K L G D FL E ++ +L H+ LV+L Y+
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL---YAV 76
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ E + NGSL +L P G+ ++ + +A A G+A++ E + I
Sbjct: 77 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---YI 131
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMTGHLL 282
HRD +A+NIL+ + K+ADFGLA+ + N + R F + APE G
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIED---NEYTAREGAKFPIKWTAPEAINYGTFT 188
Query: 283 VKSDVYSYGVVLLELLT-GRKPV-DMSQPSGQENL 315
+KSDV+S+G++L E++T GR P M+ P +NL
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 141/295 (47%), Gaps = 42/295 (14%)
Query: 95 ATNNFEPASILGEGGFGRVFKG-VLSDGTAVAIKRLTCGGQQGD-------KEFLVEVEM 146
A N E +G+GGFG V KG ++ D + VAIK L G +G+ +EF EV +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 147 LSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIAL 206
+S L+H N+VKL G + + E VP G L H L + W ++++ L
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR----MVMEFVPCGDL---YHRLLDKAHPIKWSVKLRLML 129
Query: 207 DAARGLAYLHEDSQPCVIHRDFKASNILLEN-----NFHAKVADFGLAKQAPEGRTNYLS 261
D A G+ Y+ ++ P ++HRD ++ NI L++ AKVADFG ++Q+ +
Sbjct: 130 DIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSG--- 185
Query: 262 TRVMGTFGYVAPEY--AMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWA 319
++G F ++APE A K+D YS+ ++L +LTG P D G+ +
Sbjct: 186 --LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD-EYSYGKIKFINMI 242
Query: 320 RPILRDKDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSL 374
R EE P + P++ R+ + C + + +RP +V+ L
Sbjct: 243 R---------EEGLRPTI----PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 113/215 (52%), Gaps = 16/215 (7%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
LG G FG V+ G + T VA+K L G D FL E ++ +L H+ LV+L Y+
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL---YAV 71
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ E + NGSL +L P G+ ++ + +A A G+A++ E + I
Sbjct: 72 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---YI 126
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMTGHLL 282
HRD +A+NIL+ + K+ADFGLA+ + N + R F + APE G
Sbjct: 127 HRDLRAANILVSDTLSCKIADFGLARLIED---NEYTAREGAKFPIKWTAPEAINYGTFT 183
Query: 283 VKSDVYSYGVVLLELLT-GRKPV-DMSQPSGQENL 315
+KSDV+S+G++L E++T GR P M+ P +NL
Sbjct: 184 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 218
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 141/295 (47%), Gaps = 42/295 (14%)
Query: 95 ATNNFEPASILGEGGFGRVFKG-VLSDGTAVAIKRLTCGGQQGD-------KEFLVEVEM 146
A N E +G+GGFG V KG ++ D + VAIK L G +G+ +EF EV +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 147 LSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIAL 206
+S L+H N+VKL G + + E VP G L H L + W ++++ L
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR----MVMEFVPCGDL---YHRLLDKAHPIKWSVKLRLML 129
Query: 207 DAARGLAYLHEDSQPCVIHRDFKASNILLEN-----NFHAKVADFGLAKQAPEGRTNYLS 261
D A G+ Y+ ++ P ++HRD ++ NI L++ AKVADF L++Q+ +
Sbjct: 130 DIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSG--- 185
Query: 262 TRVMGTFGYVAPEY--AMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWA 319
++G F ++APE A K+D YS+ ++L +LTG P D G+ +
Sbjct: 186 --LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD-EYSYGKIKFINMI 242
Query: 320 RPILRDKDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSL 374
R EE P + P++ R+ + C + + +RP +V+ L
Sbjct: 243 R---------EEGLRPTI----PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 113/215 (52%), Gaps = 16/215 (7%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
LG G FG V+ G + T VA+K L G D FL E ++ +L H+ LV+L Y+
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL---YAV 72
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ E + NGSL +L P G+ ++ + +A A G+A++ E + I
Sbjct: 73 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---YI 127
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMTGHLL 282
HR+ +A+NIL+ + K+ADFGLA+ + N + R F + APE G
Sbjct: 128 HRNLRAANILVSDTLSCKIADFGLARLIED---NEYTAREGAKFPIKWTAPEAINYGTFT 184
Query: 283 VKSDVYSYGVVLLELLT-GRKPV-DMSQPSGQENL 315
+KSDV+S+G++L E++T GR P M+ P +NL
Sbjct: 185 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 219
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 110/202 (54%), Gaps = 15/202 (7%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
LG+G FG V+ G + T VAIK L G + FL E +++ +L H LV+L Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ +++C E + GSL +L G +G +L + +A A G+AY+ + +
Sbjct: 83 SEEPIYIVC-EYMSKGSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVERMN---YV 136
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMTGHLL 282
HRD +A+NIL+ N KVADFGLA+ + N + R F + APE A+ G
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 283 VKSDVYSYGVVLLELLT-GRKP 303
+KSDV+S+G++L EL T GR P
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP 215
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 126/273 (46%), Gaps = 25/273 (9%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDK--EFLVEVEMLSRLHHRNLVKLVGYY 162
+G G FG V + G+ VA+K L ++ EFL EV ++ RL H N+V +G
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 163 SSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPC 222
+ + + E + GSL LH G LD R+ +A D A+G+ YLH + P
Sbjct: 104 TQPPNLS--IVTEYLSRGSLYRLLHKS-GAREQLDERRRLSMAYDVAKGMNYLH-NRNPP 159
Query: 223 VIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGHLL 282
++HRD K+ N+L++ + KV DFGL++ + S GT ++APE
Sbjct: 160 IVHRDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPEVLRDEPSN 217
Query: 283 VKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRLEELADPRLGGKYP 342
KSDVYS+GV+L EL T + QP G N + RLE P
Sbjct: 218 EKSDVYSFGVILWELAT------LQQPWGNLNPAQVVAAVGFKCKRLE----------IP 261
Query: 343 KEDFIRVCTIAAACVAPEANQRPTMGEVVQSLK 375
+ +V I C E +RP+ ++ L+
Sbjct: 262 RNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLR 294
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 130/274 (47%), Gaps = 27/274 (9%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDK--EFLVEVEMLSRLHHRNLVKLVGYY 162
+G G FG V + G+ VA+K L ++ EFL EV ++ RL H N+V +G
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 163 SSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPC 222
+ + + E + GSL LH G LD R+ +A D A+G+ YLH + P
Sbjct: 104 TQPPNLS--IVTEYLSRGSLYRLLHKS-GAREQLDERRRLSMAYDVAKGMNYLH-NRNPP 159
Query: 223 VIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTR-VMGTFGYVAPEYAMTGHL 281
++HR+ K+ N+L++ + KV DFGL++ + +LS++ GT ++APE
Sbjct: 160 IVHRNLKSPNLLVDKKYTVKVCDFGLSRLK---ASTFLSSKSAAGTPEWMAPEVLRDEPS 216
Query: 282 LVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRLEELADPRLGGKY 341
KSDVYS+GV+L EL T + QP G N + RLE
Sbjct: 217 NEKSDVYSFGVILWELAT------LQQPWGNLNPAQVVAAVGFKCKRLE----------I 260
Query: 342 PKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLK 375
P+ +V I C E +RP+ ++ L+
Sbjct: 261 PRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLR 294
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 111/215 (51%), Gaps = 16/215 (7%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
LG G G V+ G + T VA+K L G D FL E ++ +L H+ LV+L Y+
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL---YAV 76
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ E + NGSL +L P G+ ++ + +A A G+A++ E + I
Sbjct: 77 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---YI 131
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMTGHLL 282
HRD +A+NIL+ + K+ADFGLA+ + + R F + APE G
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDAEX---TAREGAKFPIKWTAPEAINYGTFT 188
Query: 283 VKSDVYSYGVVLLELLT-GRKPV-DMSQPSGQENL 315
+KSDV+S+G++L E++T GR P M+ P +NL
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 106/202 (52%), Gaps = 15/202 (7%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
LG+G FG V+ G + T VAIK L G + FL E +++ +L H LV+L Y+
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQL---YAV 72
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ E + GSL +L G +G L + +A A G+AY+ + +
Sbjct: 73 VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVERMN---YV 127
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMTGHLL 282
HRD +A+NIL+ N KVADFGLA+ + N + R F + APE A+ G
Sbjct: 128 HRDLRAANILVGENLVCKVADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFT 184
Query: 283 VKSDVYSYGVVLLELLT-GRKP 303
+KSDV+S+G++L EL T GR P
Sbjct: 185 IKSDVWSFGILLTELTTKGRVP 206
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 106/202 (52%), Gaps = 15/202 (7%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
LG+G FG V+ G + T VAIK L G + FL E +++ +L H LV+L Y+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQL---YAV 81
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ E + GSL +L G +G L + +A A G+AY+ + +
Sbjct: 82 VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVERMN---YV 136
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMTGHLL 282
HRD +A+NIL+ N KVADFGLA+ + N + R F + APE A+ G
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIED---NEXTARQGAKFPIKWTAPEAALYGRFT 193
Query: 283 VKSDVYSYGVVLLELLT-GRKP 303
+KSDV+S+G++L EL T GR P
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP 215
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 106/202 (52%), Gaps = 15/202 (7%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
LG+G FG V+ G + T VAIK L G + FL E +++ +L H LV+L Y+
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQL---YAV 70
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ E + GSL +L G +G L + +A A G+AY+ + +
Sbjct: 71 VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVERMN---YV 125
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMTGHLL 282
HRD +A+NIL+ N KVADFGLA+ + N + R F + APE A+ G
Sbjct: 126 HRDLRAANILVGENLVCKVADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFT 182
Query: 283 VKSDVYSYGVVLLELLT-GRKP 303
+KSDV+S+G++L EL T GR P
Sbjct: 183 IKSDVWSFGILLTELTTKGRVP 204
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 106/202 (52%), Gaps = 15/202 (7%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
LG+G FG V+ G + T VAIK L G + FL E +++ +L H LV+L Y+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQL---YAV 81
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ E + GSL +L G +G L + +A A G+AY+ + +
Sbjct: 82 VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVERMN---YV 136
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMTGHLL 282
HRD +A+NIL+ N KVADFGLA+ + N + R F + APE A+ G
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 283 VKSDVYSYGVVLLELLT-GRKP 303
+KSDV+S+G++L EL T GR P
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP 215
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 106/202 (52%), Gaps = 15/202 (7%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
LG+G FG V+ G + T VAIK L G + FL E +++ +L H LV+L Y+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQL---YAV 81
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ E + GSL +L G +G L + +A A G+AY+ + +
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVERMN---YV 136
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMTGHLL 282
HRD +A+NIL+ N KVADFGLA+ + N + R F + APE A+ G
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 283 VKSDVYSYGVVLLELLT-GRKP 303
+KSDV+S+G++L EL T GR P
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP 215
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 106/202 (52%), Gaps = 15/202 (7%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
LG+G FG V+ G + T VAIK L G + FL E +++ ++ H LV+L Y+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKIRHEKLVQL---YAV 81
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ E + GSL +L G +G L + +A A G+AY+ + +
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVERMN---YV 136
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMTGHLL 282
HRD +A+NIL+ N KVADFGLA+ + N + R F + APE A+ G
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 283 VKSDVYSYGVVLLELLT-GRKP 303
+KSDV+S+G++L EL T GR P
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP 215
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 105/202 (51%), Gaps = 15/202 (7%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
LG+G FG V+ G + T VAIK L G + FL E +++ +L H LV+L Y+
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQL---YAV 74
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ E + GSL +L G G L + +A A G+AY+ + +
Sbjct: 75 VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLP--QLVDMAAQIASGMAYVERMN---YV 129
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMTGHLL 282
HRD +A+NIL+ N KVADFGLA+ + N + R F + APE A+ G
Sbjct: 130 HRDLRAANILVGENLVCKVADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFT 186
Query: 283 VKSDVYSYGVVLLELLT-GRKP 303
+KSDV+S+G++L EL T GR P
Sbjct: 187 IKSDVWSFGILLTELTTKGRVP 208
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 105/202 (51%), Gaps = 15/202 (7%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
LG+G FG V+ G + T VAIK L G + FL E +++ +L H LV+L Y+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQL---YAV 81
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ E + GSL +L G +G L + +A A G+AY+ + +
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVERMN---YV 136
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMTGHLL 282
HRD A+NIL+ N KVADFGLA+ + N + R F + APE A+ G
Sbjct: 137 HRDLAAANILVGENLVCKVADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 283 VKSDVYSYGVVLLELLT-GRKP 303
+KSDV+S+G++L EL T GR P
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP 215
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 105/202 (51%), Gaps = 15/202 (7%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
LG+G FG V+ G + T VAIK L G + FL E +++ +L H LV+L Y+
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQL---YAV 71
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ E + GSL +L G G L + +A A G+AY+ + +
Sbjct: 72 VSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLP--QLVDMAAQIASGMAYVERMN---YV 126
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMTGHLL 282
HRD +A+NIL+ N KVADFGLA+ + N + R F + APE A+ G
Sbjct: 127 HRDLRAANILVGENLVCKVADFGLARLIED---NEXTARQGAKFPIKWTAPEAALYGRFT 183
Query: 283 VKSDVYSYGVVLLELLT-GRKP 303
+KSDV+S+G++L EL T GR P
Sbjct: 184 IKSDVWSFGILLTELTTKGRVP 205
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 106/202 (52%), Gaps = 15/202 (7%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
LG+G FG V+ G + T VAIK L G + FL E +++ +L H LV+L Y+
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQL---YAV 330
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ E + GSL +L G G +L + +A A G+AY+ + +
Sbjct: 331 VSEEPIYIVTEYMSKGSLLDFLKGETGK--YLRLPQLVDMAAQIASGMAYVERMN---YV 385
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMTGHLL 282
HRD +A+NIL+ N KVADFGLA+ + N + R F + APE A+ G
Sbjct: 386 HRDLRAANILVGENLVCKVADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFT 442
Query: 283 VKSDVYSYGVVLLELLT-GRKP 303
+KSDV+S+G++L EL T GR P
Sbjct: 443 IKSDVWSFGILLTELTTKGRVP 464
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 106/202 (52%), Gaps = 15/202 (7%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
LG+G FG V+ G + T VAIK L G + FL E +++ +L H LV+L Y+
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQL---YAV 247
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ E + GSL +L G G +L + +A A G+AY+ + +
Sbjct: 248 VSEEPIYIVTEYMSKGSLLDFLKGETGK--YLRLPQLVDMAAQIASGMAYVERMN---YV 302
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMTGHLL 282
HRD +A+NIL+ N KVADFGLA+ + N + R F + APE A+ G
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFT 359
Query: 283 VKSDVYSYGVVLLELLT-GRKP 303
+KSDV+S+G++L EL T GR P
Sbjct: 360 IKSDVWSFGILLTELTTKGRVP 381
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 106/202 (52%), Gaps = 15/202 (7%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
LG+G FG V+ G + T VAIK L G + FL E +++ +L H LV+L Y+
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQL---YAV 247
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ E + GSL +L G G +L + +A A G+AY+ + +
Sbjct: 248 VSEEPIYIVTEYMSKGSLLDFLKGETGK--YLRLPQLVDMAAQIASGMAYVERMN---YV 302
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMTGHLL 282
HRD +A+NIL+ N KVADFGLA+ + N + R F + APE A+ G
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFT 359
Query: 283 VKSDVYSYGVVLLELLT-GRKP 303
+KSDV+S+G++L EL T GR P
Sbjct: 360 IKSDVWSFGILLTELTTKGRVP 381
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 106/202 (52%), Gaps = 15/202 (7%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
LG+G FG V+ G + T VAIK L G + FL E +++ +L H LV+L Y+
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEA-FLQEAQVMKKLRHEKLVQL---YAV 248
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ E + GSL +L G +G +L + +A A G+AY+ + +
Sbjct: 249 VSEEPIYIVTEYMSKGSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVERMN---YV 303
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMTGHLL 282
HRD +A+NIL+ N KVADFGL + + N + R F + APE A+ G
Sbjct: 304 HRDLRAANILVGENLVCKVADFGLGRLIED---NEYTARQGAKFPIKWTAPEAALYGRFT 360
Query: 283 VKSDVYSYGVVLLELLT-GRKP 303
+KSDV+S+G++L EL T GR P
Sbjct: 361 IKSDVWSFGILLTELTTKGRVP 382
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 106/202 (52%), Gaps = 15/202 (7%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
LG+G FG V+ G + T VAIK L G + FL E +++ +L H LV+L Y+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQL---YAV 81
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ E + G L +L G +G +L + +A A G+AY+ + +
Sbjct: 82 VSEEPIYIVMEYMSKGCLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVERMN---YV 136
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMTGHLL 282
HRD +A+NIL+ N KVADFGLA+ + N + R F + APE A+ G
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 283 VKSDVYSYGVVLLELLT-GRKP 303
+KSDV+S+G++L EL T GR P
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP 215
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 106/202 (52%), Gaps = 15/202 (7%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
LG+G FG V+ G + T VAIK L G + FL E +++ +L H LV+L Y+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQL---YAV 81
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ E + G L +L G +G +L + +A A G+AY+ + +
Sbjct: 82 VSEEPIYIVTEYMSKGCLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVERMN---YV 136
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMTGHLL 282
HRD +A+NIL+ N KVADFGLA+ + N + R F + APE A+ G
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 283 VKSDVYSYGVVLLELLT-GRKP 303
+KSDV+S+G++L EL T GR P
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP 215
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 106/202 (52%), Gaps = 15/202 (7%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
LG+G FG V+ G + T VAIK L G + FL E +++ +L H LV+L Y+
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQL---YAV 247
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ E + GSL +L G G +L + +A A G+AY+ + +
Sbjct: 248 VSEEPIYIVGEYMSKGSLLDFLKGETGK--YLRLPQLVDMAAQIASGMAYVERMN---YV 302
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMTGHLL 282
HRD +A+NIL+ N KVADFGLA+ + N + R F + APE A+ G
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFT 359
Query: 283 VKSDVYSYGVVLLELLT-GRKP 303
+KSDV+S+G++L EL T GR P
Sbjct: 360 IKSDVWSFGILLTELTTKGRVP 381
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 105/202 (51%), Gaps = 15/202 (7%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
LG+G FG V+ G + T VAIK L G + FL E +++ +L H LV+L Y+
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQL---YAV 78
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ E + GSL +L G G L + ++ A G+AY+ + +
Sbjct: 79 VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLP--QLVDMSAQIASGMAYVERMN---YV 133
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMTGHLL 282
HRD +A+NIL+ N KVADFGLA+ + N + R F + APE A+ G
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIED---NEWTARQGAKFPIKWTAPEAALYGRFT 190
Query: 283 VKSDVYSYGVVLLELLT-GRKP 303
+KSDV+S+G++L EL T GR P
Sbjct: 191 IKSDVWSFGILLTELTTKGRVP 212
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 105/202 (51%), Gaps = 15/202 (7%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
LG+G FG V+ G + T VAIK L G + FL E +++ +L H LV+L Y+
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQL---YAV 78
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ E + GSL +L G G L + ++ A G+AY+ + +
Sbjct: 79 VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLP--QLVDMSAQIASGMAYVERMN---YV 133
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMTGHLL 282
HRD +A+NIL+ N KVADFGLA+ + N + R F + APE A+ G
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFT 190
Query: 283 VKSDVYSYGVVLLELLT-GRKP 303
+KSDV+S+G++L EL T GR P
Sbjct: 191 IKSDVWSFGILLTELTTKGRVP 212
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 134/295 (45%), Gaps = 37/295 (12%)
Query: 99 FEPASILGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKL 158
E ++G G FG V K VAIK++ ++ K F+VE+ LSR++H N+VKL
Sbjct: 10 IEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKL 66
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWLHG----PLGVNCHLDWETRMKIALDAARGLAY 214
G + L E GSL + LHG P H M L ++G+AY
Sbjct: 67 YG----ACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAH-----AMSWCLQCSQGVAY 117
Query: 215 LHEDSQPCVIHRDFKASNILL-ENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAP 273
LH +IHRD K N+LL K+ DFG A TN G+ ++AP
Sbjct: 118 LHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNN-----KGSAAWMAP 172
Query: 274 EYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRLEELA 333
E + K DV+S+G++L E++T RKP D + G + WA + + R
Sbjct: 173 EVFEGSNYSEKCDVFSWGIILWEVITRRKPFD--EIGGPAFRIMWA---VHNGTR----- 222
Query: 334 DPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMVQRVIECQDPTL 388
P L PK + ++ C + + +QRP+M E+V+ + + R D L
Sbjct: 223 -PPLIKNLPKP----IESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEPL 272
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/300 (33%), Positives = 137/300 (45%), Gaps = 37/300 (12%)
Query: 105 LGEGGFGRV---FKGVLSDGTA--VAIKRLTC-GGQQGDKEFLVEVEMLSRLHHRNLVKL 158
LGEG FG+V +DGT VA+K L G Q + E+++L L+H +++K
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWL-HGPLGVNCHLDWETRMKIALDAARGLAYLHE 217
G ++ L E VP GSL +L +G+ + A G+AYLH
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLA------QLLLFAQQICEGMAYLHA 152
Query: 218 DSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMG---TFGYVAPE 274
IHRD A N+LL+N+ K+ DFGLAK PEG Y R G F Y APE
Sbjct: 153 QH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXY-RVREDGDSPVFWY-APE 207
Query: 275 YAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQ--PSGQENLVTWAR---PILRDKDRL 329
SDV+S+GV L ELLT D SQ P+ L+ A+ +LR + L
Sbjct: 208 CLKEYKFYYASDVWSFGVTLYELLTH---CDSSQSPPTKFLELIGIAQGQMTVLRLTELL 264
Query: 330 EELADPRLGGKYPKEDFI--RVCTIAAACVAPEANQRPTMGEVVQSLKMVQRVIECQDPT 387
E G + P+ D V + C EA+ RPT ++ LK V + Q P+
Sbjct: 265 ER------GERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQAPS 318
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 134/295 (45%), Gaps = 37/295 (12%)
Query: 99 FEPASILGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKL 158
E ++G G FG V K VAIK++ ++ K F+VE+ LSR++H N+VKL
Sbjct: 11 IEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKL 67
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWLHG----PLGVNCHLDWETRMKIALDAARGLAY 214
G + L E GSL + LHG P H M L ++G+AY
Sbjct: 68 YG----ACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAH-----AMSWCLQCSQGVAY 118
Query: 215 LHEDSQPCVIHRDFKASNILL-ENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAP 273
LH +IHRD K N+LL K+ DFG A TN G+ ++AP
Sbjct: 119 LHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNN-----KGSAAWMAP 173
Query: 274 EYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRLEELA 333
E + K DV+S+G++L E++T RKP D + G + WA + + R
Sbjct: 174 EVFEGSNYSEKCDVFSWGIILWEVITRRKPFD--EIGGPAFRIMWA---VHNGTR----- 223
Query: 334 DPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMVQRVIECQDPTL 388
P L PK + ++ C + + +QRP+M E+V+ + + R D L
Sbjct: 224 -PPLIKNLPKP----IESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEPL 273
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
LG G FG V+ G + T VAIK L G + FL E +++ +L H LV+L Y+
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLK-PGTMSPESFLEEAQIMKKLKHDKLVQL---YAV 72
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ E + GSL +L G L + +A A G+AY+ + I
Sbjct: 73 VSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLP--NLVDMAAQVAAGMAYIERMN---YI 127
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMTGHLL 282
HRD +++NIL+ N K+ADFGLA+ + N + R F + APE A+ G
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLARLIED---NEXTARQGAKFPIKWTAPEAALYGRFT 184
Query: 283 VKSDVYSYGVVLLELLT-GRKP 303
+KSDV+S+G++L EL+T GR P
Sbjct: 185 IKSDVWSFGILLTELVTKGRVP 206
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 142/323 (43%), Gaps = 50/323 (15%)
Query: 69 ADAVTLGGSLPHPTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDG----TA 123
+ +T G+ P+ R L ELK +LG G FG V+KG+ + +G
Sbjct: 17 VEPLTPSGTAPNQAQLRILKETELKRV-------KVLGSGAFGTVYKGIWVPEGETVKIP 69
Query: 124 VAIKRLT-CGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSL 182
VAIK L G + + EF+ E +++ + H +LV+L+G S L +L+P+G L
Sbjct: 70 VAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ---LVTQLMPHGCL 126
Query: 183 ESWLH---GPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNF 239
++H +G L+W + A+G+ YL E ++HRD A N+L+++
Sbjct: 127 LEYVHEHKDNIGSQLLLNW------CVQIAKGMMYLEERR---LVHRDLAARNVLVKSPN 177
Query: 240 HAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
H K+ DFGLA+ Y + ++A E +SDV+SYGV + EL+T
Sbjct: 178 HVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 237
Query: 300 -GRKPVDMSQPSGQENLVTWARPILRDKDRLEELADPRLGGKYPKEDF--IRVCTIAAAC 356
G KP D P D LE+ G + P+ I V + C
Sbjct: 238 FGGKPYD-------------GIPTREIPDLLEK------GERLPQPPICTIDVYMVMVKC 278
Query: 357 VAPEANQRPTMGEVVQSLKMVQR 379
+A+ RP E+ + R
Sbjct: 279 WMIDADSRPKFKELAAEFSRMAR 301
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 100/294 (34%), Positives = 135/294 (45%), Gaps = 43/294 (14%)
Query: 105 LGEGGFGRV---FKGVLSDGTA--VAIKRLT--CGGQQ--GDKEFLVEVEMLSRLHHRNL 155
LGEG FG+V +DGT VA+K L CG Q G K+ E+++L L+H ++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQ---EIDILRTLYHEHI 78
Query: 156 VKLVGYYSSRDSSQHLLCYELVPNGSLESWL-HGPLGVNCHLDWETRMKIALDAARGLAY 214
+K G + L E VP GSL +L +G+ + A G+AY
Sbjct: 79 IKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLA------QLLLFAQQICEGMAY 132
Query: 215 LHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMG---TFGYV 271
LH IHR+ A N+LL+N+ K+ DFGLAK PEG Y R G F Y
Sbjct: 133 LHSQH---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGH-EYYRVREDGDSPVFWY- 187
Query: 272 APEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQ--PSGQENLVTWAR---PILRDK 326
APE SDV+S+GV L ELLT D SQ P+ L+ A+ +LR
Sbjct: 188 APECLKEYKFYYASDVWSFGVTLYELLTH---CDSSQSPPTKFLELIGIAQGQMTVLRLT 244
Query: 327 DRLEELADPRLGGKYPKEDF--IRVCTIAAACVAPEANQRPTMGEVVQSLKMVQ 378
+ LE G + P+ D V + C EA+ RPT ++ LK V
Sbjct: 245 ELLER------GERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVH 292
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 101/202 (50%), Gaps = 12/202 (5%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
+G G FG V+KG AV + +T Q + F EV +L + H N++ +GY ++
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 91
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
Q + + SL LH + + + IA ARG+ YLH S +I
Sbjct: 92 ---PQLAIVTQWCEGSSLYHHLHAS---ETKFEMKKLIDIARQTARGMDYLHAKS---II 142
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAM---TGHL 281
HRD K++NI L + K+ DFGLA + ++ ++ G+ ++APE +
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 202
Query: 282 LVKSDVYSYGVVLLELLTGRKP 303
+SDVY++G+VL EL+TG+ P
Sbjct: 203 SFQSDVYAFGIVLYELMTGQLP 224
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 100/294 (34%), Positives = 135/294 (45%), Gaps = 43/294 (14%)
Query: 105 LGEGGFGRV---FKGVLSDGTA--VAIKRLT--CGGQQ--GDKEFLVEVEMLSRLHHRNL 155
LGEG FG+V +DGT VA+K L CG Q G K+ E+++L L+H ++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQ---EIDILRTLYHEHI 78
Query: 156 VKLVGYYSSRDSSQHLLCYELVPNGSLESWL-HGPLGVNCHLDWETRMKIALDAARGLAY 214
+K G + L E VP GSL +L +G+ + A G+AY
Sbjct: 79 IKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLA------QLLLFAQQICEGMAY 132
Query: 215 LHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMG---TFGYV 271
LH IHR+ A N+LL+N+ K+ DFGLAK PEG Y R G F Y
Sbjct: 133 LHAQH---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGH-EYYRVREDGDSPVFWY- 187
Query: 272 APEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQ--PSGQENLVTWAR---PILRDK 326
APE SDV+S+GV L ELLT D SQ P+ L+ A+ +LR
Sbjct: 188 APECLKEYKFYYASDVWSFGVTLYELLTH---CDSSQSPPTKFLELIGIAQGQMTVLRLT 244
Query: 327 DRLEELADPRLGGKYPKEDF--IRVCTIAAACVAPEANQRPTMGEVVQSLKMVQ 378
+ LE G + P+ D V + C EA+ RPT ++ LK V
Sbjct: 245 ELLER------GERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVH 292
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 147/342 (42%), Gaps = 56/342 (16%)
Query: 76 GSLPHPTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDG----TAVAIKRLT 130
G+ P+ R L ELK +LG G FG V+KG+ + +G VAIK L
Sbjct: 1 GTAPNQAQLRILKETELKRV-------KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILN 53
Query: 131 -CGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH-- 187
G + + EF+ E +++ + H +LV+L+G S L +L+P+G L ++H
Sbjct: 54 ETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ---LVTQLMPHGCLLEYVHEH 110
Query: 188 -GPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADF 246
+G L+W + A+G+ YL E ++HRD A N+L+++ H K+ DF
Sbjct: 111 KDNIGSQLLLNW------CVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDF 161
Query: 247 GLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVD 305
GLA+ Y + ++A E +SDV+SYGV + EL+T G KP D
Sbjct: 162 GLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 221
Query: 306 MSQPSGQENLVTWARPILRDKDRLEELADPRLGGKYPKEDF--IRVCTIAAACVAPEANQ 363
P D LE+ G + P+ I V + C +A+
Sbjct: 222 -------------GIPTREIPDLLEK------GERLPQPPICTIDVYMVMVKCWMIDADS 262
Query: 364 RPTMGEVVQSLKMVQR------VIECQDPTLTSSNNRANLRQ 399
RP E+ + R VI+ D S N + Q
Sbjct: 263 RPKFKELAAEFSRMARDPQRYLVIQGDDRMKLPSPNDSKFFQ 304
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 100/202 (49%), Gaps = 12/202 (5%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
+G G FG V+KG AV + +T Q + F EV +L + H N++ +GY +
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 91
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
Q + + SL LH + + + IA ARG+ YLH S +I
Sbjct: 92 ---PQLAIVTQWCEGSSLYHHLHAS---ETKFEMKKLIDIARQTARGMDYLHAKS---II 142
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAM---TGHL 281
HRD K++NI L + K+ DFGLA + ++ ++ G+ ++APE +
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 202
Query: 282 LVKSDVYSYGVVLLELLTGRKP 303
+SDVY++G+VL EL+TG+ P
Sbjct: 203 SFQSDVYAFGIVLYELMTGQLP 224
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 99/202 (49%), Gaps = 12/202 (5%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
+G G FG V+KG AV + +T Q + F EV +L + H N++ +GY +
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 79
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
Q + + SL LH + + + IA ARG+ YLH S +I
Sbjct: 80 ---PQLAIVTQWCEGSSLYHHLHAS---ETKFEMKKLIDIARQTARGMDYLHAKS---II 130
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAM---TGHL 281
HRD K++NI L + K+ DFGLA ++ ++ G+ ++APE +
Sbjct: 131 HRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 190
Query: 282 LVKSDVYSYGVVLLELLTGRKP 303
+SDVY++G+VL EL+TG+ P
Sbjct: 191 SFQSDVYAFGIVLYELMTGQLP 212
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 131/286 (45%), Gaps = 40/286 (13%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
+G G FG V+KG AV + +T Q + F EV +L + H N++ +GY +
Sbjct: 36 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 95
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
Q + + SL LH + + + IA A+G+ YLH S +I
Sbjct: 96 ---PQLAIVTQWCEGSSLYHHLHI---IETKFEMIKLIDIARQTAQGMDYLHAKS---II 146
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGH---L 281
HRD K++NI L + K+ DFGLA + ++ ++ G+ ++APE
Sbjct: 147 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 206
Query: 282 LVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRLEELADPRLGGKY 341
+SDVY++G+VL EL+TG+ P + ++D++ + +G Y
Sbjct: 207 SFQSDVYAFGIVLYELMTGQLPYSN----------------INNRDQIIFM----VGRGY 246
Query: 342 PKEDFIRVCT--------IAAACVAPEANQRPTMGEVVQSLKMVQR 379
D +V + + A C+ + ++RP +++ S++++ R
Sbjct: 247 LSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLAR 292
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 131/286 (45%), Gaps = 40/286 (13%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
+G G FG V+KG AV + +T Q + F EV +L + H N++ +GY +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
Q + + SL LH + + + IA A+G+ YLH S +I
Sbjct: 76 ---PQLAIVTQWCEGSSLYHHLHI---IETKFEMIKLIDIARQTAQGMDYLHAKS---II 126
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGH---L 281
HRD K++NI L + K+ DFGLA + ++ ++ G+ ++APE
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 282 LVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRLEELADPRLGGKY 341
+SDVY++G+VL EL+TG+ P + ++D++ + +G Y
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLPYSN----------------INNRDQIIFM----VGRGY 226
Query: 342 PKEDFIRVCT--------IAAACVAPEANQRPTMGEVVQSLKMVQR 379
D +V + + A C+ + ++RP +++ S++++ R
Sbjct: 227 LSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLAR 272
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 131/286 (45%), Gaps = 40/286 (13%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
+G G FG V+KG AV + +T Q + F EV +L + H N++ +GY +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
Q + + SL LH + + + IA A+G+ YLH S +I
Sbjct: 104 ---PQLAIVTQWCEGSSLYHHLHI---IETKFEMIKLIDIARQTAQGMDYLHAKS---II 154
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGH---L 281
HRD K++NI L + K+ DFGLA + ++ ++ G+ ++APE
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 214
Query: 282 LVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRLEELADPRLGGKY 341
+SDVY++G+VL EL+TG+ P + ++D++ + +G Y
Sbjct: 215 SFQSDVYAFGIVLYELMTGQLPYSN----------------INNRDQIIFM----VGRGY 254
Query: 342 PKEDFIRVCT--------IAAACVAPEANQRPTMGEVVQSLKMVQR 379
D +V + + A C+ + ++RP +++ S++++ R
Sbjct: 255 LSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLAR 300
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 131/286 (45%), Gaps = 40/286 (13%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
+G G FG V+KG AV + +T Q + F EV +L + H N++ +GY ++
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 75
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
Q + + SL LH + + + IA A+G+ YLH S +I
Sbjct: 76 ---PQLAIVTQWCEGSSLYHHLHI---IETKFEMIKLIDIARQTAQGMDYLHAKS---II 126
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGH---L 281
HRD K++NI L + K+ DFGLA ++ ++ G+ ++APE
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 282 LVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRLEELADPRLGGKY 341
+SDVY++G+VL EL+TG+ P + ++D++ + +G Y
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLPYSN----------------INNRDQIIFM----VGRGY 226
Query: 342 PKEDFIRVCT--------IAAACVAPEANQRPTMGEVVQSLKMVQR 379
D +V + + A C+ + ++RP +++ S++++ R
Sbjct: 227 LSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLAR 272
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 130/286 (45%), Gaps = 40/286 (13%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
+G G FG V+KG AV + +T Q + F EV +L + H N++ +GY +
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 77
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
Q + + SL LH + + + IA A+G+ YLH S +I
Sbjct: 78 ---PQLAIVTQWCEGSSLYHHLHI---IETKFEMIKLIDIARQTAQGMDYLHAKS---II 128
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGH---L 281
HRD K++NI L + K+ DFGLA ++ ++ G+ ++APE
Sbjct: 129 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 188
Query: 282 LVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRLEELADPRLGGKY 341
+SDVY++G+VL EL+TG+ P + ++D++ + +G Y
Sbjct: 189 SFQSDVYAFGIVLYELMTGQLPYSN----------------INNRDQIIFM----VGRGY 228
Query: 342 PKEDFIRVCT--------IAAACVAPEANQRPTMGEVVQSLKMVQR 379
D +V + + A C+ + ++RP +++ S++++ R
Sbjct: 229 LSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLAR 274
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 130/286 (45%), Gaps = 40/286 (13%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
+G G FG V+KG AV + +T Q + F EV +L + H N++ +GY +
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
Q + + SL LH + + + IA A+G+ YLH S +I
Sbjct: 81 ---PQLAIVTQWCEGSSLYHHLHI---IETKFEMIKLIDIARQTAQGMDYLHAKS---II 131
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGH---L 281
HRD K++NI L + K+ DFGLA ++ ++ G+ ++APE
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 191
Query: 282 LVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRLEELADPRLGGKY 341
+SDVY++G+VL EL+TG+ P + ++D++ + +G Y
Sbjct: 192 SFQSDVYAFGIVLYELMTGQLPYSN----------------INNRDQIIFM----VGRGY 231
Query: 342 PKEDFIRVCT--------IAAACVAPEANQRPTMGEVVQSLKMVQR 379
D +V + + A C+ + ++RP +++ S++++ R
Sbjct: 232 LSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLAR 277
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 130/286 (45%), Gaps = 40/286 (13%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
+G G FG V+KG AV + +T Q + F EV +L + H N++ +GY +
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
Q + + SL LH + + + IA A+G+ YLH S +I
Sbjct: 81 ---PQLAIVTQWCEGSSLYHHLHI---IETKFEMIKLIDIARQTAQGMDYLHAKS---II 131
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGH---L 281
HRD K++NI L + K+ DFGLA ++ ++ G+ ++APE
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 191
Query: 282 LVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRLEELADPRLGGKY 341
+SDVY++G+VL EL+TG+ P + ++D++ + +G Y
Sbjct: 192 SFQSDVYAFGIVLYELMTGQLPYSN----------------INNRDQIIFM----VGRGY 231
Query: 342 PKEDFIRVCT--------IAAACVAPEANQRPTMGEVVQSLKMVQR 379
D +V + + A C+ + ++RP +++ S++++ R
Sbjct: 232 LSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLAR 277
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 130/286 (45%), Gaps = 40/286 (13%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
+G G FG V+KG AV + +T Q + F EV +L + H N++ +GY +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
Q + + SL LH + + + IA A+G+ YLH S +I
Sbjct: 76 ---PQLAIVTQWCEGSSLYHHLHI---IETKFEMIKLIDIARQTAQGMDYLHAKS---II 126
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGH---L 281
HRD K++NI L + K+ DFGLA ++ ++ G+ ++APE
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 282 LVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRLEELADPRLGGKY 341
+SDVY++G+VL EL+TG+ P + ++D++ + +G Y
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLPYSN----------------INNRDQIIFM----VGRGY 226
Query: 342 PKEDFIRVCT--------IAAACVAPEANQRPTMGEVVQSLKMVQR 379
D +V + + A C+ + ++RP +++ S++++ R
Sbjct: 227 LSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLAR 272
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 130/286 (45%), Gaps = 40/286 (13%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
+G G FG V+KG AV + +T Q + F EV +L + H N++ +GY +
Sbjct: 43 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 102
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
Q + + SL LH + + + IA A+G+ YLH S +I
Sbjct: 103 ---PQLAIVTQWCEGSSLYHHLHI---IETKFEMIKLIDIARQTAQGMDYLHAKS---II 153
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGH---L 281
HRD K++NI L + K+ DFGLA ++ ++ G+ ++APE
Sbjct: 154 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 213
Query: 282 LVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRLEELADPRLGGKY 341
+SDVY++G+VL EL+TG+ P + ++D++ + +G Y
Sbjct: 214 SFQSDVYAFGIVLYELMTGQLPYSN----------------INNRDQIIFM----VGRGY 253
Query: 342 PKEDFIRVCT--------IAAACVAPEANQRPTMGEVVQSLKMVQR 379
D +V + + A C+ + ++RP +++ S++++ R
Sbjct: 254 LSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLAR 299
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 130/286 (45%), Gaps = 40/286 (13%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
+G G FG V+KG AV + +T Q + F EV +L + H N++ +GY +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
Q + + SL LH + + + IA A+G+ YLH S +I
Sbjct: 104 ---PQLAIVTQWCEGSSLYHHLHI---IETKFEMIKLIDIARQTAQGMDYLHAKS---II 154
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGH---L 281
HRD K++NI L + K+ DFGLA ++ ++ G+ ++APE
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 214
Query: 282 LVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRLEELADPRLGGKY 341
+SDVY++G+VL EL+TG+ P + ++D++ + +G Y
Sbjct: 215 SFQSDVYAFGIVLYELMTGQLPYSN----------------INNRDQIIFM----VGRGY 254
Query: 342 PKEDFIRVCT--------IAAACVAPEANQRPTMGEVVQSLKMVQR 379
D +V + + A C+ + ++RP +++ S++++ R
Sbjct: 255 LSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLAR 300
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 129/288 (44%), Gaps = 31/288 (10%)
Query: 105 LGEGGFGRV---FKGVLSDGTA--VAIKRLTCG-GQQGDKEFLVEVEMLSRLHHRNLVKL 158
LGEG FG+V +DGT VA+K L G G Q + E+E+L L+H ++VK
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHED 218
G + L E VP GSL +L +C + + A G+AYLH
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYL----PRHC-VGLAQLLLFAQQICEGMAYLHAQ 131
Query: 219 SQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMG---TFGYVAPEY 275
IHR A N+LL+N+ K+ DFGLAK PEG Y R G F Y APE
Sbjct: 132 H---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGH-EYYRVREDGDSPVFWY-APEC 186
Query: 276 AMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWAR---PILRDKDRLEEL 332
SDV+S+GV L ELLT + S + L+ + +LR + LE
Sbjct: 187 LKECKFYYASDVWSFGVTLYELLT-YCDSNQSPHTKFTELIGHTQGQMTVLRLTELLER- 244
Query: 333 ADPRLGGKYPKEDF--IRVCTIAAACVAPEANQRPTMGEVVQSLKMVQ 378
G + P+ D + + C EA+ RPT +V L+ Q
Sbjct: 245 -----GERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQTAQ 287
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 129/288 (44%), Gaps = 31/288 (10%)
Query: 105 LGEGGFGRV---FKGVLSDGTA--VAIKRLTCG-GQQGDKEFLVEVEMLSRLHHRNLVKL 158
LGEG FG+V +DGT VA+K L G G Q + E+E+L L+H ++VK
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHED 218
G + L E VP GSL +L +C + + A G+AYLH
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYL----PRHC-VGLAQLLLFAQQICEGMAYLHAQ 130
Query: 219 SQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMG---TFGYVAPEY 275
IHR A N+LL+N+ K+ DFGLAK PEG Y R G F Y APE
Sbjct: 131 H---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGH-EYYRVREDGDSPVFWY-APEC 185
Query: 276 AMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWAR---PILRDKDRLEEL 332
SDV+S+GV L ELLT + S + L+ + +LR + LE
Sbjct: 186 LKECKFYYASDVWSFGVTLYELLT-YCDSNQSPHTKFTELIGHTQGQMTVLRLTELLER- 243
Query: 333 ADPRLGGKYPKEDF--IRVCTIAAACVAPEANQRPTMGEVVQSLKMVQ 378
G + P+ D + + C EA+ RPT +V L+ Q
Sbjct: 244 -----GERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQTAQ 286
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 103/202 (50%), Gaps = 14/202 (6%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
LG G FG V+ G ++ T VA+K L G + FL E ++ L H LV+L +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVRLYAV-VT 78
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
R+ +++ E + GSL +L G L + + A G+AY+ + I
Sbjct: 79 REEPIYIIT-EYMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIERKN---YI 132
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMTGHLL 282
HRD +A+N+L+ + K+ADFGLA+ + N + R F + APE G
Sbjct: 133 HRDLRAANVLVSESLMCKIADFGLARVIED---NEYTAREGAKFPIKWTAPEAINFGCFT 189
Query: 283 VKSDVYSYGVVLLELLT-GRKP 303
+KSDV+S+G++L E++T G+ P
Sbjct: 190 IKSDVWSFGILLYEIVTYGKIP 211
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 122/283 (43%), Gaps = 35/283 (12%)
Query: 105 LGEGGFGRV---FKGVLSD--GTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLV 159
LG+G FG V L D G VA+K+L ++ ++F E+E+L L H N+VK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 160 GYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDS 219
G S L E +P GSL +L +D ++ +G+ YL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYL---G 131
Query: 220 QPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMG---TFGYVAPEYA 276
IHRD NIL+EN K+ DFGL K P+ + + + G F Y APE
Sbjct: 132 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK-EFFKVKEPGESPIFWY-APESL 189
Query: 277 MTGHLLVKSDVYSYGVVLLELLT-----GRKPVDMSQPSGQEN----LVTWARPILRDKD 327
V SDV+S+GVVL EL T P + + G + +V +L++
Sbjct: 190 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG 249
Query: 328 RLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEV 370
RL PR G P E + I C NQRP+ ++
Sbjct: 250 RL-----PRPDG-CPDE----IYMIMTECWNNNVNQRPSFRDL 282
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 102/209 (48%), Gaps = 16/209 (7%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
LG G FG V+ + T VA+K + G + FL E ++ L H LVKL ++
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKL---HAV 78
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ E + GSL +L G L + + A G+A++ Q I
Sbjct: 79 VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIE---QRNYI 133
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMTGHLL 282
HRD +A+NIL+ + K+ADFGLA+ + N + R F + APE G
Sbjct: 134 HRDLRAANILVSASLVCKIADFGLARVIED---NEYTAREGAKFPIKWTAPEAINFGSFT 190
Query: 283 VKSDVYSYGVVLLELLT-GRKPVD-MSQP 309
+KSDV+S+G++L+E++T GR P MS P
Sbjct: 191 IKSDVWSFGILLMEIVTYGRIPYPGMSNP 219
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 124/274 (45%), Gaps = 35/274 (12%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
LG G FG V+ + T VA+K + G + FL E ++ L H LVKL ++
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKL---HAV 251
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ E + GSL +L G L + + A G+A++ Q I
Sbjct: 252 VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIE---QRNYI 306
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMTGHLL 282
HRD +A+NIL+ + K+ADFGLA+ + N + R F + APE G
Sbjct: 307 HRDLRAANILVSASLVCKIADFGLARVIED---NEYTAREGAKFPIKWTAPEAINFGSFT 363
Query: 283 VKSDVYSYGVVLLELLT-GRKPV-DMSQPSGQENLVTWARPILRDKDRLEELADPRLGGK 340
+KSDV+S+G++L+E++T GR P MS P ++R +R + P
Sbjct: 364 IKSDVWSFGILLMEIVTYGRIPYPGMSNPE-----------VIRALERGYRMPRPE---N 409
Query: 341 YPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSL 374
P+E + I C +RPT E +QS+
Sbjct: 410 CPEE----LYNIMMRCWKNRPEERPTF-EYIQSV 438
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 122/280 (43%), Gaps = 30/280 (10%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
+G G FG V+KG AV I ++ + + F EV +L + H N++ +GY +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK 103
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ + + + SL LH + IA A+G+ YLH + +I
Sbjct: 104 DNLA---IVTQWCEGSSLYKHLHVQ---ETKFQMFQLIDIARQTAQGMDYLHAKN---II 154
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAM---TGHL 281
HRD K++NI L K+ DFGLA + + G+ ++APE
Sbjct: 155 HRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPF 214
Query: 282 LVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRLEELADPRLGGKY 341
+SDVYSYG+VL EL+TG P S + ++ ++ A P L Y
Sbjct: 215 SFQSDVYSYGIVLYELMTGELP--YSHINNRDQIIFMVG---------RGYASPDLSKLY 263
Query: 342 ---PKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMVQ 378
PK + + A CV +RP +++ S++++Q
Sbjct: 264 KNCPKA----MKRLVADCVKKVKEERPLFPQILSSIELLQ 299
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 121/244 (49%), Gaps = 36/244 (14%)
Query: 75 GGSLPHPTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKG-VLSDGTAV--AIKRLTC 131
G + P PT L + ++K F+ ++GEG FG+V K + DG + AIKR+
Sbjct: 10 GKNNPDPTIYPVLDWNDIK-----FQ--DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE 62
Query: 132 GGQQGD-KEFLVEVEMLSRL-HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGP 189
+ D ++F E+E+L +L HH N++ L+G R L E P+G+L +L
Sbjct: 63 YASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR--GYLYLAIEYAPHGNLLDFLRKS 120
Query: 190 LGVNCH------------LDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLEN 237
+ L + + A D ARG+ YL SQ IHRD A NIL+
Sbjct: 121 RVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGE 177
Query: 238 NFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMTGHLLVKSDVYSYGVVLL 295
N+ AK+ADFGL++ G+ Y+ + MG ++A E SDV+SYGV+L
Sbjct: 178 NYVAKIADFGLSR----GQEVYVK-KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLW 232
Query: 296 ELLT 299
E+++
Sbjct: 233 EIVS 236
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 119/271 (43%), Gaps = 28/271 (10%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
+G G FG V G + VAIK + G +++F+ E E++ +L H LV+L G
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGV--C 69
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ + L +E + +G L +L G+ ET + + LD G+AYL E CVI
Sbjct: 70 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLEE---ACVI 123
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGHLLVK 284
HRD A N L+ N KV+DFG+ + + + ST + +PE K
Sbjct: 124 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS-STGTKFPVKWASPEVFSFSRYSSK 182
Query: 285 SDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARPILRDKDRLEELADPRLGGKYPK 343
SDV+S+GV++ E+ + G+ P + S ++ D L PRL +
Sbjct: 183 SDVWSFGVLMWEVFSEGKIPYENRSNS----------EVVEDISTGFRLYKPRLASTH-- 230
Query: 344 EDFIRVCTIAAACVAPEANQRPTMGEVVQSL 374
V I C RP +++ L
Sbjct: 231 -----VYQIMNHCWKERPEDRPAFSRLLRQL 256
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 119/271 (43%), Gaps = 28/271 (10%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
+G G FG V G + VAIK + G +++F+ E E++ +L H LV+L G
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGV--C 71
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ + L +E + +G L +L G+ ET + + LD G+AYL E CVI
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLEE---ACVI 125
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGHLLVK 284
HRD A N L+ N KV+DFG+ + + + ST + +PE K
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS-STGTKFPVKWASPEVFSFSRYSSK 184
Query: 285 SDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARPILRDKDRLEELADPRLGGKYPK 343
SDV+S+GV++ E+ + G+ P + S ++ D L PRL +
Sbjct: 185 SDVWSFGVLMWEVFSEGKIPYENRSNS----------EVVEDISTGFRLYKPRLASTH-- 232
Query: 344 EDFIRVCTIAAACVAPEANQRPTMGEVVQSL 374
V I C RP +++ L
Sbjct: 233 -----VYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 123/283 (43%), Gaps = 35/283 (12%)
Query: 105 LGEGGFGRV---FKGVLSD--GTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLV 159
LG+G FG V L D G VA+K+L ++ ++F E+E+L L H N+VK
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 160 GYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDS 219
G S L E +P GSL +L +D ++ +G+ YL
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYL---G 132
Query: 220 QPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMG---TFGYVAPEYA 276
IHR+ NIL+EN K+ DFGL K P+ + Y + G F Y APE
Sbjct: 133 TKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDK-EYYKVKEPGESPIFWY-APESL 190
Query: 277 MTGHLLVKSDVYSYGVVLLELLT-----GRKPVDMSQPSGQEN----LVTWARPILRDKD 327
V SDV+S+GVVL EL T P + + G + +V +L++
Sbjct: 191 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG 250
Query: 328 RLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEV 370
RL PR G P E ++ I C NQRP+ ++
Sbjct: 251 RL-----PRPDG-CPDEIYM----IMTECWNNNVNQRPSFRDL 283
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 118/271 (43%), Gaps = 28/271 (10%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
+G G FG V G + VAIK + G D +F+ E E++ +L H LV+L G
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSED-DFIEEAEVMMKLSHPKLVQLYGV--C 91
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ + L +E + +G L +L G+ ET + + LD G+AYL E CVI
Sbjct: 92 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLEE---ACVI 145
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGHLLVK 284
HRD A N L+ N KV+DFG+ + + + ST + +PE K
Sbjct: 146 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS-STGTKFPVKWASPEVFSFSRYSSK 204
Query: 285 SDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARPILRDKDRLEELADPRLGGKYPK 343
SDV+S+GV++ E+ + G+ P + S ++ D L PRL +
Sbjct: 205 SDVWSFGVLMWEVFSEGKIPYENRSNS----------EVVEDISTGFRLYKPRLASTH-- 252
Query: 344 EDFIRVCTIAAACVAPEANQRPTMGEVVQSL 374
V I C RP +++ L
Sbjct: 253 -----VYQIMNHCWKERPEDRPAFSRLLRQL 278
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 101/202 (50%), Gaps = 11/202 (5%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
+G G FG V G + VAIK + G +++F+ E E++ +L H LV+L G
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGV--C 74
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ + L +E + +G L +L G+ ET + + LD G+AYL E CVI
Sbjct: 75 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLEE---ACVI 128
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGHLLVK 284
HRD A N L+ N KV+DFG+ + + + ST + +PE K
Sbjct: 129 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS-STGTKFPVKWASPEVFSFSRYSSK 187
Query: 285 SDVYSYGVVLLELLT-GRKPVD 305
SDV+S+GV++ E+ + G+ P +
Sbjct: 188 SDVWSFGVLMWEVFSEGKIPYE 209
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 119/240 (49%), Gaps = 36/240 (15%)
Query: 79 PHPTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKG-VLSDGTAV--AIKRLTCGGQQ 135
P PT L + ++K F+ ++GEG FG+V K + DG + AIKR+ +
Sbjct: 4 PDPTIYPVLDWNDIK-----FQ--DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASK 56
Query: 136 GD-KEFLVEVEMLSRL-HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVN 193
D ++F E+E+L +L HH N++ L+G R L E P+G+L +L +
Sbjct: 57 DDHRDFAGELEVLCKLGHHPNIINLLGACEHR--GYLYLAIEYAPHGNLLDFLRKSRVLE 114
Query: 194 CH------------LDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHA 241
L + + A D ARG+ YL SQ IHRD A NIL+ N+ A
Sbjct: 115 TDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVA 171
Query: 242 KVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
K+ADFGL++ G+ Y+ + MG ++A E SDV+SYGV+L E+++
Sbjct: 172 KIADFGLSR----GQEVYVK-KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 119/281 (42%), Gaps = 31/281 (11%)
Query: 105 LGEGGFGRV---FKGVLSD--GTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLV 159
LG+G FG V L D G VA+K+L ++ ++F E+E+L L H N+VK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 160 GYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDS 219
G S L E +P GSL +L +D ++ +G+ YL
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQKH---KERIDHIKLLQYTSQICKGMEYL---G 134
Query: 220 QPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNY-LSTRVMGTFGYVAPEYAMT 278
IHRD NIL+EN K+ DFGL K P+ + + + APE
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 194
Query: 279 GHLLVKSDVYSYGVVLLELLT-----GRKPVDMSQPSGQEN----LVTWARPILRDKDRL 329
V SDV+S+GVVL EL T P + + G + +V +L++ RL
Sbjct: 195 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 254
Query: 330 EELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEV 370
PR G P E + I C NQRP+ ++
Sbjct: 255 -----PRPDG-CPDE----IYMIMTECWNNNVNQRPSFRDL 285
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 93/181 (51%), Gaps = 13/181 (7%)
Query: 144 VEMLSRLHHRNLVKLVGYYSSRDSSQHL-LCYELVPNGSLESWLHGPLGVNCHLDWETRM 202
+ L LH N +VG+Y + S + +C E + GSL+ L + E
Sbjct: 62 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKE----AKRIPEEILG 117
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
K+++ RGLAYL E Q ++HRD K SNIL+ + K+ DFG++ Q + ++
Sbjct: 118 KVSIAVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMAN 171
Query: 263 RVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPI 322
+GT Y+APE H V+SD++S G+ L+EL GR P+ P +E + RP+
Sbjct: 172 SFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI--PPPDAKELEAIFGRPV 229
Query: 323 L 323
+
Sbjct: 230 V 230
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 119/281 (42%), Gaps = 31/281 (11%)
Query: 105 LGEGGFGRV---FKGVLSD--GTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLV 159
LG+G FG V L D G VA+K+L ++ ++F E+E+L L H N+VK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 160 GYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDS 219
G S L E +P GSL +L H+ ++ +G+ YL
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKL---LQYTSQICKGMEYL---G 134
Query: 220 QPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNY-LSTRVMGTFGYVAPEYAMT 278
IHRD NIL+EN K+ DFGL K P+ + + + APE
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 194
Query: 279 GHLLVKSDVYSYGVVLLELLT-----GRKPVDMSQPSGQEN----LVTWARPILRDKDRL 329
V SDV+S+GVVL EL T P + + G + +V +L++ RL
Sbjct: 195 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 254
Query: 330 EELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEV 370
PR G P E + I C NQRP+ ++
Sbjct: 255 -----PRPDG-CPDE----IYMIMTECWNNNVNQRPSFRDL 285
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 102/216 (47%), Gaps = 38/216 (17%)
Query: 103 SILGEGGFGRV---FKGVLSDGTA--VAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVK 157
S LG+G FG V L D T VA+K+L G ++F E+++L LH +VK
Sbjct: 16 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 75
Query: 158 L--VGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYL 215
V Y R S + L E +P+G L +L R + LDA+R L Y
Sbjct: 76 YRGVSYGPGRQSLR--LVMEYLPSGCLRDFLQ-------------RHRARLDASRLLLY- 119
Query: 216 HEDSQPC----------VIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVM 265
SQ C +HRD A NIL+E+ H K+ADFGLAK P + +Y R
Sbjct: 120 --SSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK-DYYVVREP 176
Query: 266 GT--FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
G + APE +SDV+S+GVVL EL T
Sbjct: 177 GQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 102/216 (47%), Gaps = 38/216 (17%)
Query: 103 SILGEGGFGRV---FKGVLSDGTA--VAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVK 157
S LG+G FG V L D T VA+K+L G ++F E+++L LH +VK
Sbjct: 17 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 76
Query: 158 L--VGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYL 215
V Y R S + L E +P+G L +L R + LDA+R L Y
Sbjct: 77 YRGVSYGPGRQSLR--LVMEYLPSGCLRDFLQ-------------RHRARLDASRLLLY- 120
Query: 216 HEDSQPC----------VIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVM 265
SQ C +HRD A NIL+E+ H K+ADFGLAK P + +Y R
Sbjct: 121 --SSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK-DYYVVREP 177
Query: 266 GT--FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
G + APE +SDV+S+GVVL EL T
Sbjct: 178 GQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 102/216 (47%), Gaps = 38/216 (17%)
Query: 103 SILGEGGFGRV---FKGVLSDGTA--VAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVK 157
S LG+G FG V L D T VA+K+L G ++F E+++L LH +VK
Sbjct: 29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 88
Query: 158 L--VGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYL 215
V Y R S + L E +P+G L +L R + LDA+R L Y
Sbjct: 89 YRGVSYGPGRQSLR--LVMEYLPSGCLRDFLQ-------------RHRARLDASRLLLY- 132
Query: 216 HEDSQPC----------VIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVM 265
SQ C +HRD A NIL+E+ H K+ADFGLAK P + +Y R
Sbjct: 133 --SSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK-DYYVVREP 189
Query: 266 GT--FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
G + APE +SDV+S+GVVL EL T
Sbjct: 190 GQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 120/281 (42%), Gaps = 31/281 (11%)
Query: 105 LGEGGFGRV---FKGVLSD--GTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLV 159
LG+G FG V L D G VA+K+L ++ ++F E+E+L L H N+VK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 160 GYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDS 219
G S L E +P GSL +L +D ++ +G+ YL
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYL---G 134
Query: 220 QPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNY-LSTRVMGTFGYVAPEYAMT 278
IHRD NIL+EN K+ DFGL K P+ + + + APE
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 194
Query: 279 GHLLVKSDVYSYGVVLLELLT-----GRKPVDMSQPSGQEN----LVTWARPILRDKDRL 329
V SDV+S+GVVL EL T P + + G + +V +L++ RL
Sbjct: 195 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 254
Query: 330 EELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEV 370
PR G P E ++ I C NQRP+ ++
Sbjct: 255 -----PRPDG-CPDEIYM----IMTECWNNNVNQRPSFRDL 285
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 105/226 (46%), Gaps = 23/226 (10%)
Query: 92 LKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRL 150
L++ FE ++G G +G+V+KG + G AIK + G + ++E E+ ML +
Sbjct: 19 LRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE-EEEIKQEINMLKKY 77
Query: 151 -HHRNLVKLVGYYSSRD----SSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIA 205
HHRN+ G + ++ Q L E GS+ + G +W I
Sbjct: 78 SHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY--IC 135
Query: 206 LDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE--GRTNYLSTR 263
+ RGL++LH Q VIHRD K N+LL N K+ DFG++ Q GR N
Sbjct: 136 REILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTF--- 189
Query: 264 VMGTFGYVAPEYAMTGH-----LLVKSDVYSYGVVLLELLTGRKPV 304
+GT ++APE KSD++S G+ +E+ G P+
Sbjct: 190 -IGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 119/281 (42%), Gaps = 31/281 (11%)
Query: 105 LGEGGFGRV---FKGVLSD--GTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLV 159
LG+G FG V L D G VA+K+L ++ ++F E+E+L L H N+VK
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 160 GYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDS 219
G S L E +P GSL +L +D ++ +G+ YL
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYL---G 136
Query: 220 QPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNY-LSTRVMGTFGYVAPEYAMT 278
IHRD NIL+EN K+ DFGL K P+ + + + APE
Sbjct: 137 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 196
Query: 279 GHLLVKSDVYSYGVVLLELLT-----GRKPVDMSQPSGQEN----LVTWARPILRDKDRL 329
V SDV+S+GVVL EL T P + + G + +V +L++ RL
Sbjct: 197 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 256
Query: 330 EELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEV 370
PR G P E + I C NQRP+ ++
Sbjct: 257 -----PRPDG-CPDE----IYMIMTECWNNNVNQRPSFRDL 287
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 100/202 (49%), Gaps = 14/202 (6%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
LG G FG V+ G ++ T VA+K L G + FL E ++ L H LV+L +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ + E + GSL +L G L + + A G+AY+ + I
Sbjct: 79 EEPI--YIITEFMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIERKN---YI 131
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMTGHLL 282
HRD +A+N+L+ + K+ADFGLA+ + N + R F + APE G
Sbjct: 132 HRDLRAANVLVSESLMCKIADFGLARVIED---NEYTAREGAKFPIKWTAPEAINFGCFT 188
Query: 283 VKSDVYSYGVVLLELLT-GRKP 303
+KS+V+S+G++L E++T G+ P
Sbjct: 189 IKSNVWSFGILLYEIVTYGKIP 210
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 111/252 (44%), Gaps = 25/252 (9%)
Query: 105 LGEGGFGRVFKGVL------SDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKL 158
LGEG FG+VF D VA+K L K+F E E+L+ L H ++VK
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWL--HGPLGV-------NCHLDWETRMKIALDAA 209
G D ++ +E + +G L +L HGP V L + IA A
Sbjct: 81 YGVCVEGDPL--IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIA 138
Query: 210 RGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFG 269
G+ YL + +HRD N L+ N K+ DFG+++ + M
Sbjct: 139 AGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR 195
Query: 270 YVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENL--VTWARPILRDK 326
++ PE M +SDV+S GVVL E+ T G++P Q S E + +T R + R +
Sbjct: 196 WMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP--WYQLSNNEVIECITQGRVLQRPR 253
Query: 327 DRLEELADPRLG 338
+E+ + LG
Sbjct: 254 TCPQEVYELMLG 265
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 120/281 (42%), Gaps = 31/281 (11%)
Query: 105 LGEGGFGRV---FKGVLSD--GTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLV 159
LG+G FG V L D G VA+K+L ++ ++F E+E+L L H N+VK
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 160 GYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDS 219
G S L E +P GSL +L +D ++ +G+ YL
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYL---G 130
Query: 220 QPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNY-LSTRVMGTFGYVAPEYAMT 278
IHRD NIL+EN K+ DFGL K P+ + + + APE
Sbjct: 131 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 190
Query: 279 GHLLVKSDVYSYGVVLLELLT-----GRKPVDMSQPSGQEN----LVTWARPILRDKDRL 329
V SDV+S+GVVL EL T P + + G + +V +L++ RL
Sbjct: 191 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 250
Query: 330 EELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEV 370
PR G P E ++ I C NQRP+ ++
Sbjct: 251 -----PRPDG-CPDEIYM----IMTECWNNNVNQRPSFRDL 281
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 120/281 (42%), Gaps = 31/281 (11%)
Query: 105 LGEGGFGRV---FKGVLSD--GTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLV 159
LG+G FG V L D G VA+K+L ++ ++F E+E+L L H N+VK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 160 GYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDS 219
G S L E +P GSL +L +D ++ +G+ YL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYL---G 131
Query: 220 QPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNY-LSTRVMGTFGYVAPEYAMT 278
IHRD NIL+EN K+ DFGL K P+ + + + APE
Sbjct: 132 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 191
Query: 279 GHLLVKSDVYSYGVVLLELLT-----GRKPVDMSQPSGQEN----LVTWARPILRDKDRL 329
V SDV+S+GVVL EL T P + + G + +V +L++ RL
Sbjct: 192 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 251
Query: 330 EELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEV 370
PR G P E ++ I C NQRP+ ++
Sbjct: 252 -----PRPDG-CPDEIYM----IMTECWNNNVNQRPSFRDL 282
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 119/281 (42%), Gaps = 31/281 (11%)
Query: 105 LGEGGFGRV---FKGVLSD--GTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLV 159
LG+G FG V L D G VA+K+L ++ ++F E+E+L L H N+VK
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 160 GYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDS 219
G S L E +P GSL +L +D ++ +G+ YL
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYL---G 135
Query: 220 QPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNY-LSTRVMGTFGYVAPEYAMT 278
IHRD NIL+EN K+ DFGL K P+ + + + APE
Sbjct: 136 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 195
Query: 279 GHLLVKSDVYSYGVVLLELLT-----GRKPVDMSQPSGQEN----LVTWARPILRDKDRL 329
V SDV+S+GVVL EL T P + + G + +V +L++ RL
Sbjct: 196 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 255
Query: 330 EELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEV 370
PR G P E + I C NQRP+ ++
Sbjct: 256 -----PRPDG-CPDE----IYMIMTECWNNNVNQRPSFRDL 286
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 99/203 (48%), Gaps = 15/203 (7%)
Query: 105 LGEGGFGRVFKGVL-----SDGTAVAIKRLTC-GGQQGDKEFLVEVEMLSRLHHRNLVKL 158
LGEG FG+V + G VA+K L G + E+E+L L+H N+VK
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHED 218
G + + L E +P+GSL+ +L P N ++ + ++K A+ +G+ YL
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYL--PKNKN-KINLKQQLKYAVQICKGMDYLGSR 145
Query: 219 SQPCVIHRDFKASNILLENNFHAKVADFGLAK--QAPEGRTNYLSTRVMGTFGYVAPEYA 276
+HRD A N+L+E+ K+ DFGL K + + R F Y APE
Sbjct: 146 Q---YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECL 201
Query: 277 MTGHLLVKSDVYSYGVVLLELLT 299
M + SDV+S+GV L ELLT
Sbjct: 202 MQSKFYIASDVWSFGVTLHELLT 224
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 119/281 (42%), Gaps = 31/281 (11%)
Query: 105 LGEGGFGRV---FKGVLSD--GTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLV 159
LG+G FG V L D G VA+K+L ++ ++F E+E+L L H N+VK
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 160 GYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDS 219
G S L E +P GSL +L +D ++ +G+ YL
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYL---G 137
Query: 220 QPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNY-LSTRVMGTFGYVAPEYAMT 278
IHRD NIL+EN K+ DFGL K P+ + + + APE
Sbjct: 138 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 197
Query: 279 GHLLVKSDVYSYGVVLLELLT-----GRKPVDMSQPSGQEN----LVTWARPILRDKDRL 329
V SDV+S+GVVL EL T P + + G + +V +L++ RL
Sbjct: 198 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 257
Query: 330 EELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEV 370
PR G P E + I C NQRP+ ++
Sbjct: 258 -----PRPDG-CPDE----IYMIMTECWNNNVNQRPSFRDL 288
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 120/281 (42%), Gaps = 31/281 (11%)
Query: 105 LGEGGFGRV---FKGVLSD--GTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLV 159
LG+G FG V L D G VA+K+L ++ ++F E+E+L L H N+VK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 160 GYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDS 219
G S L E +P GSL +L +D ++ +G+ YL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYL---G 131
Query: 220 QPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNY-LSTRVMGTFGYVAPEYAMT 278
IHRD NIL+EN K+ DFGL K P+ + + + APE
Sbjct: 132 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 191
Query: 279 GHLLVKSDVYSYGVVLLELLT-----GRKPVDMSQPSGQEN----LVTWARPILRDKDRL 329
V SDV+S+GVVL EL T P + + G + +V +L++ RL
Sbjct: 192 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 251
Query: 330 EELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEV 370
PR G P E ++ I C NQRP+ ++
Sbjct: 252 -----PRPDG-CPDEIYM----IMTECWNNNVNQRPSFRDL 282
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 120/281 (42%), Gaps = 31/281 (11%)
Query: 105 LGEGGFGRVFK---GVLSD--GTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLV 159
LG+G FG V L D G VA+K+L ++ ++F E+E+L L H N+VK
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 160 GYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDS 219
G S L E +P GSL +L +D ++ +G+ YL
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYL---G 162
Query: 220 QPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNY-LSTRVMGTFGYVAPEYAMT 278
IHRD NIL+EN K+ DFGL K P+ + + + APE
Sbjct: 163 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 222
Query: 279 GHLLVKSDVYSYGVVLLELLT-----GRKPVDMSQPSGQEN----LVTWARPILRDKDRL 329
V SDV+S+GVVL EL T P + + G + +V +L++ RL
Sbjct: 223 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 282
Query: 330 EELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEV 370
PR G P E ++ I C NQRP+ ++
Sbjct: 283 -----PRPDG-CPDEIYM----IMTECWNNNVNQRPSFRDL 313
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 120/281 (42%), Gaps = 31/281 (11%)
Query: 105 LGEGGFGRV---FKGVLSD--GTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLV 159
LG+G FG V L D G VA+K+L ++ ++F E+E+L L H N+VK
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 160 GYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDS 219
G S L E +P GSL +L +D ++ +G+ YL
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYL---G 129
Query: 220 QPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNY-LSTRVMGTFGYVAPEYAMT 278
IHRD NIL+EN K+ DFGL K P+ + + + APE
Sbjct: 130 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 189
Query: 279 GHLLVKSDVYSYGVVLLELLT-----GRKPVDMSQPSGQEN----LVTWARPILRDKDRL 329
V SDV+S+GVVL EL T P + + G + +V +L++ RL
Sbjct: 190 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 249
Query: 330 EELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEV 370
PR G P E ++ I C NQRP+ ++
Sbjct: 250 -----PRPDG-CPDEIYM----IMTECWNNNVNQRPSFRDL 280
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 119/281 (42%), Gaps = 31/281 (11%)
Query: 105 LGEGGFGRV---FKGVLSD--GTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLV 159
LG+G FG V L D G VA+K+L ++ ++F E+E+L L H N+VK
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 160 GYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDS 219
G S L E +P GSL +L +D ++ +G+ YL
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYL---G 138
Query: 220 QPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNY-LSTRVMGTFGYVAPEYAMT 278
IHRD NIL+EN K+ DFGL K P+ + + + APE
Sbjct: 139 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 198
Query: 279 GHLLVKSDVYSYGVVLLELLT-----GRKPVDMSQPSGQEN----LVTWARPILRDKDRL 329
V SDV+S+GVVL EL T P + + G + +V +L++ RL
Sbjct: 199 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 258
Query: 330 EELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEV 370
PR G P E + I C NQRP+ ++
Sbjct: 259 -----PRPDG-CPDE----IYMIMTECWNNNVNQRPSFRDL 289
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 103/212 (48%), Gaps = 24/212 (11%)
Query: 104 ILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQ--QGDKEFLVEVEMLSRLHHRNLVKLVG 160
I+G GGFG+V++ + D AV R Q + E ++ + L H N++ L G
Sbjct: 14 IIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73
Query: 161 YYSSRDSSQHLLCYELVPNGSLESWLHGP-LGVNCHLDWETRMKIALDAARGLAYLHEDS 219
L E G L L G + + ++W A+ ARG+ YLH+++
Sbjct: 74 V--CLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW------AVQIARGMNYLHDEA 125
Query: 220 QPCVIHRDFKASNILL----EN----NFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYV 271
+IHRD K+SNIL+ EN N K+ DFGLA++ RT +S G + ++
Sbjct: 126 IVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREW--HRTTKMSA--AGAYAWM 181
Query: 272 APEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
APE SDV+SYGV+L ELLTG P
Sbjct: 182 APEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 109/215 (50%), Gaps = 18/215 (8%)
Query: 104 ILGEGGFGRVFKGVLS----DGTAVAIKRLTCG-GQQGDKEFLVEVEMLSRLHHRNLVKL 158
++G G FG V +G L + VAIK L G ++ +EFL E ++ + H N+++L
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 82
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHED 218
G + +S ++ E + NG+L+S+L G + ++ A G+ YL E
Sbjct: 83 EGVVT--NSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR---GIASGMRYLAEM 137
Query: 219 SQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMG---TFGYVAPEY 275
S +HRD A NIL+ +N KV+DFGL++ E ++ T +G + APE
Sbjct: 138 S---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEA 194
Query: 276 AMTGHLLVKSDVYSYGVVLLELLT-GRKPV-DMSQ 308
SD +SYG+V+ E+++ G +P DMS
Sbjct: 195 IAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSN 229
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 120/281 (42%), Gaps = 31/281 (11%)
Query: 105 LGEGGFGRV---FKGVLSD--GTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLV 159
LG+G FG V L D G VA+K+L ++ ++F E+E+L L H N+VK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 160 GYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDS 219
G S L E +P GSL +L +D ++ +G+ YL
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYL---G 149
Query: 220 QPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNY-LSTRVMGTFGYVAPEYAMT 278
IHRD NIL+EN K+ DFGL K P+ + + + APE
Sbjct: 150 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 209
Query: 279 GHLLVKSDVYSYGVVLLELLT-----GRKPVDMSQPSGQEN----LVTWARPILRDKDRL 329
V SDV+S+GVVL EL T P + + G + +V +L++ RL
Sbjct: 210 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 269
Query: 330 EELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEV 370
PR G P E ++ I C NQRP+ ++
Sbjct: 270 -----PRPDG-CPDEIYM----IMTECWNNNVNQRPSFRDL 300
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 99/203 (48%), Gaps = 15/203 (7%)
Query: 105 LGEGGFGRVFKGVL-----SDGTAVAIKRLTC-GGQQGDKEFLVEVEMLSRLHHRNLVKL 158
LGEG FG+V + G VA+K L G + E+E+L L+H N+VK
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHED 218
G + + L E +P+GSL+ +L P N ++ + ++K A+ +G+ YL
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYL--PKNKN-KINLKQQLKYAVQICKGMDYLGSR 133
Query: 219 SQPCVIHRDFKASNILLENNFHAKVADFGLAK--QAPEGRTNYLSTRVMGTFGYVAPEYA 276
+HRD A N+L+E+ K+ DFGL K + + R F Y APE
Sbjct: 134 Q---YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECL 189
Query: 277 MTGHLLVKSDVYSYGVVLLELLT 299
M + SDV+S+GV L ELLT
Sbjct: 190 MQSKFYIASDVWSFGVTLHELLT 212
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 121/274 (44%), Gaps = 45/274 (16%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
LG G FG V+ + T VA+K + G + FL E ++ L H LVKL ++
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKL---HAV 245
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ E + GSL +L G L + + A G+A++ Q I
Sbjct: 246 VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIE---QRNYI 300
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMTGHLL 282
HRD +A+NIL+ + K+ADFGLA RV F + APE G
Sbjct: 301 HRDLRAANILVSASLVCKIADFGLA-------------RVGAKFPIKWTAPEAINFGSFT 347
Query: 283 VKSDVYSYGVVLLELLT-GRKPV-DMSQPSGQENLVTWARPILRDKDRLEELADPRLGGK 340
+KSDV+S+G++L+E++T GR P MS P ++R +R + P
Sbjct: 348 IKSDVWSFGILLMEIVTYGRIPYPGMSNPE-----------VIRALERGYRMPRPE---N 393
Query: 341 YPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSL 374
P+E + I C +RPT E +QS+
Sbjct: 394 CPEE----LYNIMMRCWKNRPEERPTF-EYIQSV 422
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 120/281 (42%), Gaps = 31/281 (11%)
Query: 105 LGEGGFGRV---FKGVLSD--GTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLV 159
LG+G FG V L D G VA+K+L ++ ++F E+E+L L H N+VK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 160 GYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDS 219
G S L E +P GSL +L +D ++ +G+ YL
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYL---G 149
Query: 220 QPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNY-LSTRVMGTFGYVAPEYAMT 278
IHRD NIL+EN K+ DFGL K P+ + + + APE
Sbjct: 150 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 209
Query: 279 GHLLVKSDVYSYGVVLLELLT-----GRKPVDMSQPSGQEN----LVTWARPILRDKDRL 329
V SDV+S+GVVL EL T P + + G + +V +L++ RL
Sbjct: 210 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 269
Query: 330 EELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEV 370
PR G P E ++ I C NQRP+ ++
Sbjct: 270 -----PRPDG-CPDEIYM----IMTECWNNNVNQRPSFRDL 300
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 124/281 (44%), Gaps = 34/281 (12%)
Query: 105 LGEGGFGRVFKGVL-SDGTAVAIK--RLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGY 161
+G G FG VF G L +D T VA+K R T K FL E +L + H N+V+L+G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAK-FLQEARILKQYSHPNIVRLIGV 180
Query: 162 YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQP 221
+ + + ELV G ++L L +T +++ DAA G+ YL
Sbjct: 181 CTQKQPI--YIVMELVQGGDFLTFLRTE---GARLRVKTLLQMVGDAAAGMEYLESK--- 232
Query: 222 CVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGHL 281
C IHRD A N L+ K++DFG++++ +G + APE G
Sbjct: 233 CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRY 292
Query: 282 LVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARPILRDKDRLEELADPRLGGK 340
+SDV+S+G++L E + G P P L ++ E + GG+
Sbjct: 293 SSESDVWSFGILLWETFSLGASPY----------------PNLSNQQTREFVEK---GGR 333
Query: 341 YPKEDFI--RVCTIAAACVAPEANQRPTMGEVVQSLKMVQR 379
P + V + C A E QRP+ + Q L+ +++
Sbjct: 334 LPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 109/214 (50%), Gaps = 18/214 (8%)
Query: 104 ILGEGGFGRVFKGVLS----DGTAVAIKRLTCG-GQQGDKEFLVEVEMLSRLHHRNLVKL 158
++G G FG V +G L + VAIK L G ++ +EFL E ++ + H N+++L
Sbjct: 21 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 80
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHED 218
G + +S ++ E + NG+L+S+L G + ++ A G+ YL E
Sbjct: 81 EGVVT--NSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR---GIASGMRYLAEM 135
Query: 219 SQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMG---TFGYVAPEY 275
S +HRD A NIL+ +N KV+DFGL++ E ++ T +G + APE
Sbjct: 136 S---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEA 192
Query: 276 AMTGHLLVKSDVYSYGVVLLELLT-GRKPV-DMS 307
SD +SYG+V+ E+++ G +P DMS
Sbjct: 193 IAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMS 226
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 100/202 (49%), Gaps = 11/202 (5%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
+G G FG V G + VAIK + G +++F+ E E++ +L H LV+L G
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGV--C 72
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ + L E + +G L +L G+ ET + + LD G+AYL E CVI
Sbjct: 73 LEQAPICLVTEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLEE---ACVI 126
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGHLLVK 284
HRD A N L+ N KV+DFG+ + + + ST + +PE K
Sbjct: 127 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS-STGTKFPVKWASPEVFSFSRYSSK 185
Query: 285 SDVYSYGVVLLELLT-GRKPVD 305
SDV+S+GV++ E+ + G+ P +
Sbjct: 186 SDVWSFGVLMWEVFSEGKIPYE 207
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 124/281 (44%), Gaps = 34/281 (12%)
Query: 105 LGEGGFGRVFKGVL-SDGTAVAIK--RLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGY 161
+G G FG VF G L +D T VA+K R T K FL E +L + H N+V+L+G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAK-FLQEARILKQYSHPNIVRLIGV 180
Query: 162 YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQP 221
+ + + ELV G ++L L +T +++ DAA G+ YL
Sbjct: 181 CTQKQPI--YIVMELVQGGDFLTFLRTE---GARLRVKTLLQMVGDAAAGMEYLESK--- 232
Query: 222 CVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGHL 281
C IHRD A N L+ K++DFG++++ +G + APE G
Sbjct: 233 CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRY 292
Query: 282 LVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARPILRDKDRLEELADPRLGGK 340
+SDV+S+G++L E + G P P L ++ E + GG+
Sbjct: 293 SSESDVWSFGILLWETFSLGASPY----------------PNLSNQQTREFVEK---GGR 333
Query: 341 YPKEDFI--RVCTIAAACVAPEANQRPTMGEVVQSLKMVQR 379
P + V + C A E QRP+ + Q L+ +++
Sbjct: 334 LPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 104/216 (48%), Gaps = 27/216 (12%)
Query: 98 NFEPASILGEGGFGRVFKGVLS-DGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLV 156
+F+ ++G GGFG+VFK DG IKR+ ++ ++E V+ L++L H N+V
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAERE----VKALAKLDHVNIV 67
Query: 157 KLVGYY---------SSRDSSQH-----LLCYELVPNGSLESWLHGPLGVNCHLDWETRM 202
G + SS++SS+ + E G+LE W+ G LD +
Sbjct: 68 HYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK--LDKVLAL 125
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
++ +G+ Y+H +I+RD K SNI L + K+ DFGL + +
Sbjct: 126 ELFEQITKGVDYIHSKK---LINRDLKPSNIFLVDTKQVKIGDFGLVTSL---KNDGKRX 179
Query: 263 RVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELL 298
R GT Y++PE + + D+Y+ G++L ELL
Sbjct: 180 RSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 119/240 (49%), Gaps = 36/240 (15%)
Query: 79 PHPTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKG-VLSDGTAV--AIKRLTCGGQQ 135
P PT L + ++K F+ ++GEG FG+V K + DG + AIKR+ +
Sbjct: 11 PDPTIYPVLDWNDIK-----FQ--DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASK 63
Query: 136 GD-KEFLVEVEMLSRL-HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVN 193
D ++F E+E+L +L HH N++ L+G R L E P+G+L +L +
Sbjct: 64 DDHRDFAGELEVLCKLGHHPNIINLLGACEHR--GYLYLAIEYAPHGNLLDFLRKSRVLE 121
Query: 194 CH------------LDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHA 241
L + + A D ARG+ YL SQ IHR+ A NIL+ N+ A
Sbjct: 122 TDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVA 178
Query: 242 KVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
K+ADFGL++ G+ Y+ + MG ++A E SDV+SYGV+L E+++
Sbjct: 179 KIADFGLSR----GQEVYVK-KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 120/274 (43%), Gaps = 28/274 (10%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
+G G FG V G + VAIK + G +++F+ E E++ +L H LV+L G
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGV--C 71
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ + L +E + +G L +L G+ ET + + LD G+AYL E S VI
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLEEAS---VI 125
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGHLLVK 284
HRD A N L+ N KV+DFG+ + + + ST + +PE K
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS-STGTKFPVKWASPEVFSFSRYSSK 184
Query: 285 SDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARPILRDKDRLEELADPRLGGKYPK 343
SDV+S+GV++ E+ + G+ P + S ++ D L PRL +
Sbjct: 185 SDVWSFGVLMWEVFSEGKIPYENRSNS----------EVVEDISTGFRLYKPRLASTH-- 232
Query: 344 EDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMV 377
V I C RP +++ L +
Sbjct: 233 -----VYQIMNHCWKERPEDRPAFSRLLRQLAAI 261
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 96/213 (45%), Gaps = 32/213 (15%)
Query: 103 SILGEGGFGRV---FKGVLSD--GTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVK 157
S LG+G FG V L D G VA+K+L G ++F E+++L LH +VK
Sbjct: 13 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 72
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHE 217
G + L E +P+G L +L R + LDA+R L Y
Sbjct: 73 YRGVSYGPGRPELRLVMEYLPSGCLRDFLQ-------------RHRARLDASRLLLY--- 116
Query: 218 DSQPC----------VIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRV-MG 266
SQ C +HRD A NIL+E+ H K+ADFGLAK P + +
Sbjct: 117 SSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQS 176
Query: 267 TFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
+ APE +SDV+S+GVVL EL T
Sbjct: 177 PIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 104/210 (49%), Gaps = 21/210 (10%)
Query: 102 ASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVG 160
+LG+G FG+ K + G + +K L ++ + FL EV+++ L H N++K +G
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 161 YYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQ 220
+D + + E + G+L + ++ W R+ A D A G+AYLH +
Sbjct: 75 VLY-KDKRLNFIT-EYIKGGTLRGIIKS---MDSQYPWSQRVSFAKDIASGMAYLHSMN- 128
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLA------KQAPEG-RTNYLSTR-----VMGTF 268
+IHRD + N L+ N + VADFGLA K PEG R+ R V+G
Sbjct: 129 --IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNP 186
Query: 269 GYVAPEYAMTGHLLVKSDVYSYGVVLLELL 298
++APE K DV+S+G+VL E++
Sbjct: 187 YWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 108/240 (45%), Gaps = 34/240 (14%)
Query: 94 EATNNFEPASILGEGGFGRVFKG-VLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSR--- 149
E +F+ ++LG+G F V++ + G VAIK + DK+ + + M+ R
Sbjct: 8 EKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMI-------DKKAMYKAGMVQRVQN 60
Query: 150 -------LHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHG---PLGVNCHLDWE 199
L H ++++L Y+ DS+ L E+ NG + +L P N E
Sbjct: 61 EVKIHCQLKHPSILELYNYF--EDSNYVYLVLEMCHNGEMNRYLKNRVKPFSEN-----E 113
Query: 200 TRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNY 259
R G+ YLH ++HRD SN+LL N + K+ADFGLA Q +
Sbjct: 114 AR-HFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKH 169
Query: 260 LSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWA 319
+ + GT Y++PE A ++SDV+S G + LL GR P D N V A
Sbjct: 170 YT--LCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLA 227
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 119/242 (49%), Gaps = 29/242 (11%)
Query: 74 LGGSLPHPTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDG----TAVAIKR 128
+ G+ P+ R L EL++ +LG G FG V+KG+ + DG VAIK
Sbjct: 1 MSGAAPNQALLRILKETELRKV-------KVLGSGAFGTVYKGIWIPDGENVKIPVAIKV 53
Query: 129 L-TCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH 187
L + +KE L E +++ + + +L+G + S L +L+P G L +
Sbjct: 54 LRENTSPKANKEILDEAYVMAGVGSPYVSRLLGICLT---STVQLVTQLMPYGCLLDHVR 110
Query: 188 ---GPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVA 244
G LG L+W + A+G++YL ED + ++HRD A N+L+++ H K+
Sbjct: 111 ENRGRLGSQDLLNW------CMQIAKGMSYL-EDVR--LVHRDLAARNVLVKSPNHVKIT 161
Query: 245 DFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 303
DFGLA+ T Y + ++A E + +SDV+SYGV + EL+T G KP
Sbjct: 162 DFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKP 221
Query: 304 VD 305
D
Sbjct: 222 YD 223
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 108/211 (51%), Gaps = 30/211 (14%)
Query: 105 LGEGGFGRVFKGVLSDGT----AVAIKRLTCGGQQGD---KEFLVEVEMLSRLHHRNLVK 157
LG GG V+ L++ T VAIK + ++ + K F EV S+L H+N+V
Sbjct: 19 LGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS 75
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWL--HGPLGVNCHLDWETRMKIALDAARGLAYL 215
++ D + L E + +L ++ HGPL V+ +++ ++ LD G+ +
Sbjct: 76 MIDVDEEDDC--YYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQI---LD---GIKHA 127
Query: 216 HEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE---GRTNYLSTRVMGTFGYVA 272
H+ ++HRD K NIL+++N K+ DFG+AK E +TN+ V+GT Y +
Sbjct: 128 HD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNH----VLGTVQYFS 180
Query: 273 PEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
PE A +D+YS G+VL E+L G P
Sbjct: 181 PEQAKGEATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 103/229 (44%), Gaps = 40/229 (17%)
Query: 98 NFEPASILGEGGFGRVFKGVLS-DGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLV 156
+F+ ++G GGFG+VFK DG I+R+ ++ ++E V+ L++L H N+V
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAERE----VKALAKLDHVNIV 68
Query: 157 KLVGYY--------------------------SSRDSSQHLLC-YELVPNGSLESWLHGP 189
G + SSR ++ L E G+LE W+
Sbjct: 69 HYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 128
Query: 190 LGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLA 249
G LD +++ +G+ Y+H +IHRD K SNI L + K+ DFGL
Sbjct: 129 RGEK--LDKVLALELFEQITKGVDYIHSKK---LIHRDLKPSNIFLVDTKQVKIGDFGLV 183
Query: 250 KQAPEGRTNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELL 298
+ + TR GT Y++PE + + D+Y+ G++L ELL
Sbjct: 184 TSL---KNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 119/289 (41%), Gaps = 41/289 (14%)
Query: 105 LGEGGFGRVFKGVL------SDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKL 158
LGEG FG+VF D VA+K L K+F E E+L+ L H ++VK
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWL--HGPLGV----------NCHLDWETRMKIAL 206
G D ++ +E + +G L +L HGP + L + IA
Sbjct: 83 YGVCG--DGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIAS 140
Query: 207 DAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMG 266
A G+ YL + +HRD N L+ N K+ DFG+++ + M
Sbjct: 141 QIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTML 197
Query: 267 TFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARPILRD 325
++ PE M +SDV+S+GV+L E+ T G++P + +T R + R
Sbjct: 198 PIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLER- 256
Query: 326 KDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSL 374
PR+ PKE V + C E QR + E+ + L
Sbjct: 257 ---------PRVC---PKE----VYDVMLGCWQREPQQRLNIKEIYKIL 289
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 131/270 (48%), Gaps = 28/270 (10%)
Query: 91 ELKEATNNFEPASILGEGGFGRVFK-GVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSR 149
ELK+ ++FE S LG G G VFK G +A K + + + ++ L
Sbjct: 2 ELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR--ELQV 57
Query: 150 LHHRNLVKLVGYYSSRDSSQHL-LCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDA 208
LH N +VG+Y + S + +C E + GSL+ L + + K+++
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAV 113
Query: 209 ARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF 268
+GL YL E + ++HRD K SNIL+ + K+ DFG++ Q + N +GT
Sbjct: 114 IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF----VGTR 167
Query: 269 GYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDR 328
Y++PE H V+SD++S G+ L+E+ GR P+ P +E+ +RP + +
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI--PPPDAKED----SRPPMAIFEL 221
Query: 329 LEELAD---PRL-GGKYPKE--DFIRVCTI 352
L+ + + P+L G + E DF+ C I
Sbjct: 222 LDYIVNEPPPKLPSGVFSLEFQDFVNKCLI 251
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 134/289 (46%), Gaps = 29/289 (10%)
Query: 97 NNFEPASILGEGGFGRVFKGVLS-DGTAVAIKRLTCGG-QQGDKEFLVEVEMLSRLHHRN 154
+++E ++G G V + VAIKR+ Q E L E++ +S+ HH N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 155 LVKLVGYYSSRDSSQHL-LCYELVPNGSLESWLHGPLGVNCH----LDWETRMKIALDAA 209
+V YY+S L L +L+ GS+ + + H LD T I +
Sbjct: 75 IV---SYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 131
Query: 210 RGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEG---RTNYLSTRVMG 266
GL YLH++ Q IHRD KA NILL + ++ADFG++ G N + +G
Sbjct: 132 EGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 188
Query: 267 TFGYVAPEYA--MTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILR 324
T ++APE + G+ K+D++S+G+ +EL TG P P + +
Sbjct: 189 TPCWMAPEVMEQVRGYDF-KADIWSFGITAIELATGAAPYHKYPP-----MKVLMLTLQN 242
Query: 325 DKDRLEE-LADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQ 372
D LE + D + KY K F ++ ++ C+ + +RPT E+++
Sbjct: 243 DPPSLETGVQDKEMLKKYGK-SFRKMISL---CLQKDPEKRPTAAELLR 287
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 135/297 (45%), Gaps = 36/297 (12%)
Query: 108 GGFGRVFKG-VLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSSRD 166
G FG V+K +L++ AV I + Q E+ EV L + H N+++ +G R
Sbjct: 35 GRFGCVWKAQLLNEYVAVKIFPIQ-DKQSWQNEY--EVYSLPGMKHENILQFIGA-EKRG 90
Query: 167 SSQHL---LCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHED----- 218
+S + L GSL +L + + W IA ARGLAYLHED
Sbjct: 91 TSVDVDLWLITAFHEKGSLSDFLKANV-----VSWNELCHIAETMARGLAYLHEDIPGLK 145
Query: 219 --SQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYA 276
+P + HRD K+ N+LL+NN A +ADFGLA + G++ + +GT Y+APE
Sbjct: 146 DGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPE-V 204
Query: 277 MTGHL------LVKSDVYSYGVVLLELLT----GRKPVDMSQPSGQENLVTWARPILRDK 326
+ G + ++ D+Y+ G+VL EL + PVD +E + P L D
Sbjct: 205 LEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQ--HPSLEDM 262
Query: 327 DR--LEELADPRLGGKYPKE-DFIRVCTIAAACVAPEANQRPTMGEVVQSLKMVQRV 380
+ + P L + K +C C +A R + G V + + +QR+
Sbjct: 263 QEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 134/289 (46%), Gaps = 29/289 (10%)
Query: 97 NNFEPASILGEGGFGRVFKGVLS-DGTAVAIKRLTCGG-QQGDKEFLVEVEMLSRLHHRN 154
+++E ++G G V + VAIKR+ Q E L E++ +S+ HH N
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 155 LVKLVGYYSSRDSSQHL-LCYELVPNGSLESWLHGPLGVNCH----LDWETRMKIALDAA 209
+V YY+S L L +L+ GS+ + + H LD T I +
Sbjct: 70 IV---SYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 126
Query: 210 RGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEG---RTNYLSTRVMG 266
GL YLH++ Q IHRD KA NILL + ++ADFG++ G N + +G
Sbjct: 127 EGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 183
Query: 267 TFGYVAPEYA--MTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILR 324
T ++APE + G+ K+D++S+G+ +EL TG P P L +
Sbjct: 184 TPCWMAPEVMEQVRGYDF-KADIWSFGITAIELATGAAPYHKYPPMKVLMLT-----LQN 237
Query: 325 DKDRLEE-LADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQ 372
D LE + D + KY K F ++ ++ C+ + +RPT E+++
Sbjct: 238 DPPSLETGVQDKEMLKKYGK-SFRKMISL---CLQKDPEKRPTAAELLR 282
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 136/298 (45%), Gaps = 41/298 (13%)
Query: 92 LKEATNNFEPASILGEGGFGRVFKGV-LSDG----TAVAIKRL-TCGGQQGDKEFLVEVE 145
LKE F+ +LG G FG V+KG+ + +G VAIK L + +KE L E
Sbjct: 16 LKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 73
Query: 146 MLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH---GPLGVNCHLDWETRM 202
+++ + + ++ +L+G + S L +L+P G L ++ +G L+W
Sbjct: 74 VMASVDNPHVCRLLGICLT---STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW---- 126
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
+ A+G+ YL ED + ++HRD A N+L++ H K+ DFGLAK Y +
Sbjct: 127 --CVQIAKGMNYL-EDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 181
Query: 263 RVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARP 321
++A E + +SDV+SYGV + EL+T G KP D P+ +
Sbjct: 182 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE------ISS 234
Query: 322 ILRDKDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMVQR 379
IL +RL + P I V I C +A+ RP E++ + R
Sbjct: 235 ILEKGERLPQ----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 282
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 141/306 (46%), Gaps = 43/306 (14%)
Query: 104 ILGEGGFGRVFKG-VLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSR--LHHRNLVKLVG 160
I G FG V+K +++D AV I L Q + + E E+ S + H NL++ +
Sbjct: 22 IKARGRFGCVWKAQLMNDFVAVKIFPL-----QDKQSWQSEREIFSTPGMKHENLLQFIA 76
Query: 161 --YYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHED 218
S + L GSL +L G + + W +A +RGL+YLHED
Sbjct: 77 AEKRGSNLEVELWLITAFHDKGSLTDYLKGNI-----ITWNELCHVAETMSRGLSYLHED 131
Query: 219 --------SQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
+P + HRDFK+ N+LL+++ A +ADFGLA + G+ + +GT Y
Sbjct: 132 VPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRY 191
Query: 271 VAPEYAMTGHL------LVKSDVYSYGVVLLELLTGRK----PVD-----MSQPSGQENL 315
+APE + G + ++ D+Y+ G+VL EL++ K PVD + GQ
Sbjct: 192 MAPE-VLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYMLPFEEEIGQHPS 250
Query: 316 VTWARPILRDKDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLK 375
+ + ++ K + D L K+P ++C C +A R + G V + +
Sbjct: 251 LEELQEVVVHKKMRPTIKDHWL--KHP--GLAQLCVTIEECWDHDAEARLSAGCVEERVS 306
Query: 376 MVQRVI 381
+++R +
Sbjct: 307 LIRRSV 312
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 136/298 (45%), Gaps = 41/298 (13%)
Query: 92 LKEATNNFEPASILGEGGFGRVFKGV-LSDG----TAVAIKRL-TCGGQQGDKEFLVEVE 145
LKE F+ +LG G FG V+KG+ + +G VAIK L + +KE L E
Sbjct: 15 LKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 146 MLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH---GPLGVNCHLDWETRM 202
+++ + + ++ +L+G + S L +L+P G L ++ +G L+W
Sbjct: 73 VMASVDNPHVCRLLGICLT---STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW---- 125
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
+ A+G+ YL ED + ++HRD A N+L++ H K+ DFGLAK Y +
Sbjct: 126 --CVQIAKGMNYL-EDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
Query: 263 RVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARP 321
++A E + +SDV+SYGV + EL+T G KP D P+ +
Sbjct: 181 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE------ISS 233
Query: 322 ILRDKDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMVQR 379
IL +RL + P I V I C +A+ RP E++ + R
Sbjct: 234 ILEKGERLPQ----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 281
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 136/298 (45%), Gaps = 41/298 (13%)
Query: 92 LKEATNNFEPASILGEGGFGRVFKGV-LSDG----TAVAIKRL-TCGGQQGDKEFLVEVE 145
LKE F+ +LG G FG V+KG+ + +G VAIK L + +KE L E
Sbjct: 13 LKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 70
Query: 146 MLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH---GPLGVNCHLDWETRM 202
+++ + + ++ +L+G + S L +L+P G L ++ +G L+W
Sbjct: 71 VMASVDNPHVCRLLGICLT---STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW---- 123
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
+ A+G+ YL ED + ++HRD A N+L++ H K+ DFGLAK Y +
Sbjct: 124 --CVQIAKGMNYL-EDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 178
Query: 263 RVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARP 321
++A E + +SDV+SYGV + EL+T G KP D P+ +
Sbjct: 179 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE------ISS 231
Query: 322 ILRDKDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMVQR 379
IL +RL + P I V I C +A+ RP E++ + R
Sbjct: 232 ILEKGERLPQ----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 279
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 136/298 (45%), Gaps = 41/298 (13%)
Query: 92 LKEATNNFEPASILGEGGFGRVFKGV-LSDG----TAVAIKRL-TCGGQQGDKEFLVEVE 145
LKE F+ +LG G FG V+KG+ + +G VAIK L + +KE L E
Sbjct: 12 LKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 146 MLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH---GPLGVNCHLDWETRM 202
+++ + + ++ +L+G + S L +L+P G L ++ +G L+W
Sbjct: 70 VMASVDNPHVCRLLGICLT---STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW---- 122
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
+ A+G+ YL ED + ++HRD A N+L++ H K+ DFGLAK Y +
Sbjct: 123 --CVQIAKGMNYL-EDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
Query: 263 RVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARP 321
++A E + +SDV+SYGV + EL+T G KP D P+ +
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE------ISS 230
Query: 322 ILRDKDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMVQR 379
IL +RL + P I V I C +A+ RP E++ + R
Sbjct: 231 ILEKGERLPQ----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 102/215 (47%), Gaps = 18/215 (8%)
Query: 99 FEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKE-FLVEVEMLSRLHHRNLV 156
+E LG GGFG V + + D G VAIK+ ++E + +E++++ +L+H N+V
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 157 KLV----GYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIAL-DAARG 211
G + LL E G L +L+ NC E ++ L D +
Sbjct: 77 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQ--FENCCGLKEGPIRTLLSDISSA 134
Query: 212 LAYLHEDSQPCVIHRDFKASNILLE---NNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF 268
L YLHE+ +IHRD K NI+L+ K+ D G AK+ +G L T +GT
Sbjct: 135 LRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE---LCTEFVGTL 188
Query: 269 GYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
Y+APE V D +S+G + E +TG +P
Sbjct: 189 QYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 136/298 (45%), Gaps = 41/298 (13%)
Query: 92 LKEATNNFEPASILGEGGFGRVFKGV-LSDG----TAVAIKRL-TCGGQQGDKEFLVEVE 145
LKE F+ +LG G FG V+KG+ + +G VAIK L + +KE L E
Sbjct: 14 LKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 146 MLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH---GPLGVNCHLDWETRM 202
+++ + + ++ +L+G + S L +L+P G L ++ +G L+W
Sbjct: 72 VMASVDNPHVCRLLGICLT---STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW---- 124
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
+ A+G+ YL ED + ++HRD A N+L++ H K+ DFGLAK Y +
Sbjct: 125 --CVQIAKGMNYL-EDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 179
Query: 263 RVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARP 321
++A E + +SDV+SYGV + EL+T G KP D P+ +
Sbjct: 180 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE------ISS 232
Query: 322 ILRDKDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMVQR 379
IL +RL + P I V I C +A+ RP E++ + R
Sbjct: 233 ILEKGERLPQ----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 280
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 108/216 (50%), Gaps = 16/216 (7%)
Query: 91 ELKEATNNFEPASILGEGGFGRVFK-GVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSR 149
ELK+ ++FE S LG G G VFK G +A K + + + ++ L
Sbjct: 64 ELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR--ELQV 119
Query: 150 LHHRNLVKLVGYYSSRDSSQHL-LCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDA 208
LH N +VG+Y + S + +C E + GSL+ L + + K+++
Sbjct: 120 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAV 175
Query: 209 ARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF 268
+GL YL E + ++HRD K SNIL+ + K+ DFG++ Q + ++ +GT
Sbjct: 176 IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFVGTR 229
Query: 269 GYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPV 304
Y++PE H V+SD++S G+ L+E+ GR P+
Sbjct: 230 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 136/298 (45%), Gaps = 41/298 (13%)
Query: 92 LKEATNNFEPASILGEGGFGRVFKGV-LSDG----TAVAIKRL-TCGGQQGDKEFLVEVE 145
LKE F+ +LG G FG V+KG+ + +G VAIK L + +KE L E
Sbjct: 13 LKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 70
Query: 146 MLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH---GPLGVNCHLDWETRM 202
+++ + + ++ +L+G + S L +L+P G L ++ +G L+W
Sbjct: 71 VMASVDNPHVCRLLGICLT---STVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNW---- 123
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
+ A+G+ YL ED + ++HRD A N+L++ H K+ DFGLAK Y +
Sbjct: 124 --CVQIAKGMNYL-EDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 178
Query: 263 RVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARP 321
++A E + +SDV+SYGV + EL+T G KP D P+ +
Sbjct: 179 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE------ISS 231
Query: 322 ILRDKDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMVQR 379
IL +RL + P I V I C +A+ RP E++ + R
Sbjct: 232 ILEKGERLPQ----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 279
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 95/215 (44%), Gaps = 17/215 (7%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQG----DKEFLVEVEMLSRL 150
A +FE LG+G FG V+ + ++ Q + + EVE+ S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
H N+++L GY+ D+++ L E P G + + L D + + A
Sbjct: 71 RHPNILRLYGYF--HDATRVYLILEYAPRGEV----YKELQKLSKFDEQRTATYITELAN 124
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
L+Y H VIHRD K N+LL + K+ADFG + AP R T + GT Y
Sbjct: 125 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTTLCGTLDY 177
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 305
+ PE K D++S GV+ E L G+ P +
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 102/215 (47%), Gaps = 18/215 (8%)
Query: 99 FEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKE-FLVEVEMLSRLHHRNLV 156
+E LG GGFG V + + D G VAIK+ ++E + +E++++ +L+H N+V
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 157 KLV----GYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIAL-DAARG 211
G + LL E G L +L+ NC E ++ L D +
Sbjct: 76 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQ--FENCCGLKEGPIRTLLSDISSA 133
Query: 212 LAYLHEDSQPCVIHRDFKASNILLE---NNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF 268
L YLHE+ +IHRD K NI+L+ K+ D G AK+ +G L T +GT
Sbjct: 134 LRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE---LCTEFVGTL 187
Query: 269 GYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
Y+APE V D +S+G + E +TG +P
Sbjct: 188 QYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 96/215 (44%), Gaps = 17/215 (7%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQG----DKEFLVEVEMLSRL 150
A +FE LG+G FG V+ + ++ Q + + EVE+ S L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
H N+++L GY+ D+++ L E P G++ + L D + + A
Sbjct: 92 RHPNILRLYGYF--HDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELAN 145
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
L+Y H VIHRD K N+LL + K+ADFG + AP R T + GT Y
Sbjct: 146 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTTLCGTLDY 198
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 305
+ PE K D++S GV+ E L G+ P +
Sbjct: 199 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 136/298 (45%), Gaps = 41/298 (13%)
Query: 92 LKEATNNFEPASILGEGGFGRVFKGV-LSDG----TAVAIKRL-TCGGQQGDKEFLVEVE 145
LKE F+ +LG G FG V+KG+ + +G VAIK L + +KE L E
Sbjct: 6 LKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 63
Query: 146 MLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH---GPLGVNCHLDWETRM 202
+++ + + ++ +L+G + S L +L+P G L ++ +G L+W
Sbjct: 64 VMASVDNPHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW---- 116
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
+ A+G+ YL ED + ++HRD A N+L++ H K+ DFGLAK Y +
Sbjct: 117 --CVQIAKGMNYL-EDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 171
Query: 263 RVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARP 321
++A E + +SDV+SYGV + EL+T G KP D P+ +
Sbjct: 172 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE------ISS 224
Query: 322 ILRDKDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMVQR 379
IL +RL + P I V I C +A+ RP E++ + R
Sbjct: 225 ILEKGERLPQ----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 272
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 136/298 (45%), Gaps = 41/298 (13%)
Query: 92 LKEATNNFEPASILGEGGFGRVFKGV-LSDG----TAVAIKRL-TCGGQQGDKEFLVEVE 145
LKE F+ +LG G FG V+KG+ + +G VAIK L + +KE L E
Sbjct: 18 LKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 75
Query: 146 MLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH---GPLGVNCHLDWETRM 202
+++ + + ++ +L+G + S L +L+P G L ++ +G L+W
Sbjct: 76 VMASVDNPHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW---- 128
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
+ A+G+ YL ED + ++HRD A N+L++ H K+ DFGLAK Y +
Sbjct: 129 --CVQIAKGMNYL-EDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 183
Query: 263 RVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARP 321
++A E + +SDV+SYGV + EL+T G KP D P+ +
Sbjct: 184 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE------ISS 236
Query: 322 ILRDKDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMVQR 379
IL +RL + P I V I C +A+ RP E++ + R
Sbjct: 237 ILEKGERLPQ----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 284
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 136/298 (45%), Gaps = 41/298 (13%)
Query: 92 LKEATNNFEPASILGEGGFGRVFKGV-LSDG----TAVAIKRL-TCGGQQGDKEFLVEVE 145
LKE F+ +LG G FG V+KG+ + +G VAIK L + +KE L E
Sbjct: 14 LKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 146 MLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH---GPLGVNCHLDWETRM 202
+++ + + ++ +L+G + S L +L+P G L ++ +G L+W
Sbjct: 72 VMASVDNPHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW---- 124
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
+ A+G+ YL ED + ++HRD A N+L++ H K+ DFGLAK Y +
Sbjct: 125 --CVQIAKGMNYL-EDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 179
Query: 263 RVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARP 321
++A E + +SDV+SYGV + EL+T G KP D P+ +
Sbjct: 180 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE------ISS 232
Query: 322 ILRDKDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMVQR 379
IL +RL + P I V I C +A+ RP E++ + R
Sbjct: 233 ILEKGERLPQ----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 280
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 136/298 (45%), Gaps = 41/298 (13%)
Query: 92 LKEATNNFEPASILGEGGFGRVFKGV-LSDG----TAVAIKRL-TCGGQQGDKEFLVEVE 145
LKE F+ +LG G FG V+KG+ + +G VAIK L + +KE L E
Sbjct: 15 LKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 146 MLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH---GPLGVNCHLDWETRM 202
+++ + + ++ +L+G + S L +L+P G L ++ +G L+W
Sbjct: 73 VMASVDNPHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW---- 125
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
+ A+G+ YL ED + ++HRD A N+L++ H K+ DFGLAK Y +
Sbjct: 126 --CVQIAKGMNYL-EDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
Query: 263 RVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARP 321
++A E + +SDV+SYGV + EL+T G KP D P+ +
Sbjct: 181 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE------ISS 233
Query: 322 ILRDKDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMVQR 379
IL +RL + P I V I C +A+ RP E++ + R
Sbjct: 234 ILEKGERLPQ----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 281
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 136/298 (45%), Gaps = 41/298 (13%)
Query: 92 LKEATNNFEPASILGEGGFGRVFKGV-LSDG----TAVAIKRL-TCGGQQGDKEFLVEVE 145
LKE F+ +LG G FG V+KG+ + +G VAIK L + +KE L E
Sbjct: 19 LKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 146 MLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH---GPLGVNCHLDWETRM 202
+++ + + ++ +L+G + S L +L+P G L ++ +G L+W
Sbjct: 77 VMASVDNPHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW---- 129
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
+ A+G+ YL ED + ++HRD A N+L++ H K+ DFGLAK Y +
Sbjct: 130 --CVQIAKGMNYL-EDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 184
Query: 263 RVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARP 321
++A E + +SDV+SYGV + EL+T G KP D P+ +
Sbjct: 185 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE------ISS 237
Query: 322 ILRDKDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMVQR 379
IL +RL + P I V I C +A+ RP E++ + R
Sbjct: 238 ILEKGERLPQ----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 285
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 136/298 (45%), Gaps = 41/298 (13%)
Query: 92 LKEATNNFEPASILGEGGFGRVFKGV-LSDG----TAVAIKRL-TCGGQQGDKEFLVEVE 145
LKE F+ +LG G FG V+KG+ + +G VAIK L + +KE L E
Sbjct: 15 LKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 146 MLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH---GPLGVNCHLDWETRM 202
+++ + + ++ +L+G + S L +L+P G L ++ +G L+W
Sbjct: 73 VMASVDNPHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW---- 125
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
+ A+G+ YL ED + ++HRD A N+L++ H K+ DFGLAK Y +
Sbjct: 126 --CVQIAKGMNYL-EDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
Query: 263 RVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARP 321
++A E + +SDV+SYGV + EL+T G KP D P+ +
Sbjct: 181 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE------ISS 233
Query: 322 ILRDKDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMVQR 379
IL +RL + P I V I C +A+ RP E++ + R
Sbjct: 234 ILEKGERLPQ----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 281
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 136/298 (45%), Gaps = 41/298 (13%)
Query: 92 LKEATNNFEPASILGEGGFGRVFKGV-LSDG----TAVAIKRL-TCGGQQGDKEFLVEVE 145
LKE F+ +LG G FG V+KG+ + +G VAIK L + +KE L E
Sbjct: 12 LKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 146 MLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH---GPLGVNCHLDWETRM 202
+++ + + ++ +L+G + S L +L+P G L ++ +G L+W
Sbjct: 70 VMASVDNPHVCRLLGICLT---STVQLITQLMPFGXLLDYVREHKDNIGSQYLLNW---- 122
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
+ A+G+ YL ED + ++HRD A N+L++ H K+ DFGLAK Y +
Sbjct: 123 --CVQIAKGMNYL-EDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
Query: 263 RVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARP 321
++A E + +SDV+SYGV + EL+T G KP D P+ +
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE------ISS 230
Query: 322 ILRDKDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMVQR 379
IL +RL + P I V I C +A+ RP E++ + R
Sbjct: 231 ILEKGERLPQ----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 136/298 (45%), Gaps = 41/298 (13%)
Query: 92 LKEATNNFEPASILGEGGFGRVFKGV-LSDG----TAVAIKRL-TCGGQQGDKEFLVEVE 145
LKE F+ +LG G FG V+KG+ + +G VAIK L + +KE L E
Sbjct: 12 LKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 146 MLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH---GPLGVNCHLDWETRM 202
+++ + + ++ +L+G + S L +L+P G L ++ +G L+W
Sbjct: 70 VMASVDNPHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW---- 122
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
+ A+G+ YL ED + ++HRD A N+L++ H K+ DFGLAK Y +
Sbjct: 123 --CVQIAKGMNYL-EDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
Query: 263 RVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARP 321
++A E + +SDV+SYGV + EL+T G KP D P+ +
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE------ISS 230
Query: 322 ILRDKDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMVQR 379
IL +RL + P I V I C +A+ RP E++ + R
Sbjct: 231 ILEKGERLPQ----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 136/298 (45%), Gaps = 41/298 (13%)
Query: 92 LKEATNNFEPASILGEGGFGRVFKGV-LSDG----TAVAIKRL-TCGGQQGDKEFLVEVE 145
LKE F+ +LG G FG V+KG+ + +G VAIK L + +KE L E
Sbjct: 37 LKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 94
Query: 146 MLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH---GPLGVNCHLDWETRM 202
+++ + + ++ +L+G + S L +L+P G L ++ +G L+W
Sbjct: 95 VMASVDNPHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW---- 147
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
+ A+G+ YL ED + ++HRD A N+L++ H K+ DFGLAK Y +
Sbjct: 148 --CVQIAKGMNYL-EDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 202
Query: 263 RVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARP 321
++A E + +SDV+SYGV + EL+T G KP D P+ +
Sbjct: 203 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE------ISS 255
Query: 322 ILRDKDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMVQR 379
IL +RL + P I V I C +A+ RP E++ + R
Sbjct: 256 ILEKGERLPQ----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 303
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 96/215 (44%), Gaps = 17/215 (7%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQG----DKEFLVEVEMLSRL 150
A +FE LG+G FG V+ + ++ Q + + EVE+ S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
H N+++L GY+ D+++ L E P G++ + L D + + A
Sbjct: 66 RHPNILRLYGYF--HDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELAN 119
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
L+Y H VIHRD K N+LL + K+ADFG + AP R T + GT Y
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTELCGTLDY 172
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 305
+ PE K D++S GV+ E L G+ P +
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 96/215 (44%), Gaps = 17/215 (7%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQG----DKEFLVEVEMLSRL 150
A +FE LG+G FG V+ + ++ Q + + EVE+ S L
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
H N+++L GY+ D+++ L E P G++ + L D + + A
Sbjct: 83 RHPNILRLYGYF--HDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELAN 136
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
L+Y H VIHRD K N+LL + K+ADFG + AP R T + GT Y
Sbjct: 137 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTTLCGTLDY 189
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 305
+ PE K D++S GV+ E L G+ P +
Sbjct: 190 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 224
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 96/215 (44%), Gaps = 17/215 (7%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQG----DKEFLVEVEMLSRL 150
A +FE LG+G FG V+ + ++ Q + + EVE+ S L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
H N+++L GY+ D+++ L E P G++ + L D + + A
Sbjct: 67 RHPNILRLYGYF--HDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELAN 120
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
L+Y H VIHRD K N+LL + K+ADFG + AP R LS GT Y
Sbjct: 121 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLS----GTLDY 173
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 305
+ PE K D++S GV+ E L G+ P +
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 136/298 (45%), Gaps = 41/298 (13%)
Query: 92 LKEATNNFEPASILGEGGFGRVFKGV-LSDG----TAVAIKRL-TCGGQQGDKEFLVEVE 145
LKE F+ +LG G FG V+KG+ + +G VAIK L + +KE L E
Sbjct: 22 LKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 79
Query: 146 MLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH---GPLGVNCHLDWETRM 202
+++ + + ++ +L+G + S L +L+P G L ++ +G L+W
Sbjct: 80 VMASVDNPHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW---- 132
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
+ A+G+ YL ED + ++HRD A N+L++ H K+ DFGLAK Y +
Sbjct: 133 --CVQIAKGMNYL-EDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 187
Query: 263 RVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARP 321
++A E + +SDV+SYGV + EL+T G KP D P+ +
Sbjct: 188 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE------ISS 240
Query: 322 ILRDKDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMVQR 379
IL +RL + P I V I C +A+ RP E++ + R
Sbjct: 241 ILEKGERLPQ----------PPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 288
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 136/298 (45%), Gaps = 41/298 (13%)
Query: 92 LKEATNNFEPASILGEGGFGRVFKGV-LSDG----TAVAIKRL-TCGGQQGDKEFLVEVE 145
LKE F+ +LG G FG V+KG+ + +G VAIK L + +KE L E
Sbjct: 15 LKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 146 MLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH---GPLGVNCHLDWETRM 202
+++ + + ++ +L+G + S L +L+P G L ++ +G L+W
Sbjct: 73 VMASVDNPHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW---- 125
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
+ A+G+ YL ED + ++HRD A N+L++ H K+ DFGLAK Y +
Sbjct: 126 --CVQIAKGMNYL-EDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
Query: 263 RVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARP 321
++A E + +SDV+SYGV + EL+T G KP D P+ +
Sbjct: 181 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE------ISS 233
Query: 322 ILRDKDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMVQR 379
IL +RL + P I V I C +A+ RP E++ + R
Sbjct: 234 ILEKGERLPQ----------PPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 281
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 96/215 (44%), Gaps = 17/215 (7%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQG----DKEFLVEVEMLSRL 150
A +FE LG+G FG V+ + ++ Q + + EVE+ S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
H N+++L GY+ D+++ L E P G++ + L D + + A
Sbjct: 69 RHPNILRLYGYF--HDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELAN 122
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
L+Y H VIHRD K N+LL + K+ADFG + AP R T + GT Y
Sbjct: 123 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTTLCGTLDY 175
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 305
+ PE K D++S GV+ E L G+ P +
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 96/215 (44%), Gaps = 17/215 (7%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQG----DKEFLVEVEMLSRL 150
A +FE LG+G FG V+ + ++ Q + + EVE+ S L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
H N+++L GY+ D+++ L E P G++ + L D + + A
Sbjct: 92 RHPNILRLYGYF--HDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELAN 145
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
L+Y H VIHRD K N+LL + K+ADFG + AP R + L GT Y
Sbjct: 146 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC----GTLDY 198
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 305
+ PE K D++S GV+ E L G+ P +
Sbjct: 199 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 94/215 (43%), Gaps = 17/215 (7%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQG----DKEFLVEVEMLSRL 150
A +FE LG+G FG V+ + ++ Q + + EVE+ S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
H N+++L GY+ D+++ L E P G + + L D + + A
Sbjct: 71 RHPNILRLYGYF--HDATRVYLILEYAPRGEV----YKELQKLSKFDEQRTATYITELAN 124
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
L+Y H VIHRD K N+LL + K+ADFG + AP R L GT Y
Sbjct: 125 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLX----GTLDY 177
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 305
+ PE K D++S GV+ E L G+ P +
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 103/210 (49%), Gaps = 20/210 (9%)
Query: 104 ILGEGGFGRVFKGVLSDGTA-----VAIKRLTCGGQQGDK-EFLVEVEMLSRLHHRNLVK 157
++G G FG V+KG+L + VAIK L G + + +FL E ++ + H N+++
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIR 110
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHE 217
L G S ++ E + NG+L+ +L G L ++ A G+ YL
Sbjct: 111 LEGVISKYKP--MMIITEYMENGALDKFLREKDGEFSVLQLVGMLR---GIAAGMKYL-- 163
Query: 218 DSQPCVIHRDFKASNILLENNFHAKVADFGLAK---QAPEGRTNYLSTRVMGTFGYVAPE 274
+ +HRD A NIL+ +N KV+DFGL++ PE Y ++ + APE
Sbjct: 164 -ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA--TYTTSGGKIPIRWTAPE 220
Query: 275 YAMTGHLLVKSDVYSYGVVLLELLT-GRKP 303
SDV+S+G+V+ E++T G +P
Sbjct: 221 AISYRKFTSASDVWSFGIVMWEVMTYGERP 250
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 96/215 (44%), Gaps = 17/215 (7%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQG----DKEFLVEVEMLSRL 150
A +FE LG+G FG V+ + ++ Q + + EVE+ S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
H N+++L GY+ D+++ L E P G++ + L D + + A
Sbjct: 66 RHPNILRLYGYF--HDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELAN 119
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
L+Y H VIHRD K N+LL + K+ADFG + AP R T + GT Y
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTTLCGTLDY 172
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 305
+ PE K D++S GV+ E L G+ P +
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 96/215 (44%), Gaps = 17/215 (7%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQG----DKEFLVEVEMLSRL 150
A +FE LG+G FG V+ + ++ Q + + EVE+ S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
H N+++L GY+ D+++ L E P G++ + L D + + A
Sbjct: 71 RHPNILRLYGYF--HDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELAN 124
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
L+Y H VIHRD K N+LL + K+ADFG + AP R T + GT Y
Sbjct: 125 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTTLCGTLDY 177
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 305
+ PE K D++S GV+ E L G+ P +
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 136/298 (45%), Gaps = 41/298 (13%)
Query: 92 LKEATNNFEPASILGEGGFGRVFKGV-LSDG----TAVAIKRL-TCGGQQGDKEFLVEVE 145
LKE F+ +LG G FG V+KG+ + +G VAIK L + +KE L E
Sbjct: 12 LKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 146 MLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH---GPLGVNCHLDWETRM 202
+++ + + ++ +L+G + S L +L+P G L ++ +G L+W
Sbjct: 70 VMASVDNPHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW---- 122
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
+ A+G+ YL ED + ++HRD A N+L++ H K+ DFGLAK Y +
Sbjct: 123 --CVQIAKGMNYL-EDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
Query: 263 RVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARP 321
++A E + +SDV+SYGV + EL+T G KP D P+ +
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE------ISS 230
Query: 322 ILRDKDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMVQR 379
IL +RL + P I V I C +A+ RP E++ + R
Sbjct: 231 ILEKGERLPQ----------PPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 107/216 (49%), Gaps = 16/216 (7%)
Query: 91 ELKEATNNFEPASILGEGGFGRVFK-GVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSR 149
ELK+ ++FE S LG G G VFK G +A K + + + ++ L
Sbjct: 2 ELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR--ELQV 57
Query: 150 LHHRNLVKLVGYYSSRDSSQHL-LCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDA 208
LH N +VG+Y + S + +C E + GSL+ L + + K+++
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAV 113
Query: 209 ARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF 268
+GL YL E + ++HRD K SNIL+ + K+ DFG++ Q + N +GT
Sbjct: 114 IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF----VGTR 167
Query: 269 GYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPV 304
Y++PE H V+SD++S G+ L+E+ GR P+
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 107/216 (49%), Gaps = 16/216 (7%)
Query: 91 ELKEATNNFEPASILGEGGFGRVFK-GVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSR 149
ELK+ ++FE S LG G G VFK G +A K + + + ++ L
Sbjct: 29 ELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR--ELQV 84
Query: 150 LHHRNLVKLVGYYSSRDSSQHL-LCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDA 208
LH N +VG+Y + S + +C E + GSL+ L + + K+++
Sbjct: 85 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA----GRIPEQILGKVSIAV 140
Query: 209 ARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF 268
+GL YL E + ++HRD K SNIL+ + K+ DFG++ Q + N +GT
Sbjct: 141 IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF----VGTR 194
Query: 269 GYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPV 304
Y++PE H V+SD++S G+ L+E+ GR P+
Sbjct: 195 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 135/298 (45%), Gaps = 41/298 (13%)
Query: 92 LKEATNNFEPASILGEGGFGRVFKGV-LSDG----TAVAIKRL-TCGGQQGDKEFLVEVE 145
LKE F+ +LG G FG V+KG+ + +G VAIK L + +KE L E
Sbjct: 9 LKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 66
Query: 146 MLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH---GPLGVNCHLDWETRM 202
+++ + + ++ +L+G + S L +L+P G L ++ +G L+W
Sbjct: 67 VMASVDNPHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW---- 119
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
+ A G+ YL ED + ++HRD A N+L++ H K+ DFGLAK Y +
Sbjct: 120 --CVQIAEGMNYL-EDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 174
Query: 263 RVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARP 321
++A E + +SDV+SYGV + EL+T G KP D P+ +
Sbjct: 175 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE------ISS 227
Query: 322 ILRDKDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMVQR 379
IL +RL + P I V I C +A+ RP E++ + R
Sbjct: 228 ILEKGERLPQ----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 275
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 101/206 (49%), Gaps = 27/206 (13%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
+G+G FG V G G VA+K + + FL E ++++L H NLV+L+G
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 165 RDSSQHLLCYELVPNGSLESWLHG----PLGVNCHLDWETRMKIALDAARGLAYLHEDSQ 220
+++ E + GSL +L LG +C L K +LD + YL ++
Sbjct: 258 EKGGLYIVT-EYMAKGSLVDYLRSRGRSVLGGDCLL------KFSLDVCEAMEYLEGNN- 309
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMT 278
+HRD A N+L+ + AKV+DFGL K+A ST+ G + APE
Sbjct: 310 --FVHRDLAARNVLVSEDNVAKVSDFGLTKEAS-------STQDTGKLPVKWTAPEALRE 360
Query: 279 GHLLVKSDVYSYGVVLLELLT-GRKP 303
KSDV+S+G++L E+ + GR P
Sbjct: 361 KKFSTKSDVWSFGILLWEIYSFGRVP 386
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 96/215 (44%), Gaps = 17/215 (7%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQG----DKEFLVEVEMLSRL 150
A +FE LG+G FG V+ + ++ Q + + EVE+ S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
H N+++L GY+ D+++ L E P G++ + L D + + A
Sbjct: 71 RHPNILRLYGYF--HDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELAN 124
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
L+Y H VIHRD K N+LL + K+ADFG + AP R T + GT Y
Sbjct: 125 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTTLCGTLDY 177
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 305
+ PE K D++S GV+ E L G+ P +
Sbjct: 178 LPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 96/215 (44%), Gaps = 17/215 (7%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQG----DKEFLVEVEMLSRL 150
A +FE LG+G FG V+ + ++ Q + + EVE+ S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
H N+++L GY+ D+++ L E P G++ + L D + + A
Sbjct: 66 RHPNILRLYGYF--HDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELAN 119
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
L+Y H VIHRD K N+LL + K+ADFG + AP R T + GT Y
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTDLCGTLDY 172
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 305
+ PE K D++S GV+ E L G+ P +
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 107/216 (49%), Gaps = 16/216 (7%)
Query: 91 ELKEATNNFEPASILGEGGFGRVFK-GVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSR 149
ELK+ ++FE S LG G G VFK G +A K + + + ++ L
Sbjct: 2 ELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR--ELQV 57
Query: 150 LHHRNLVKLVGYYSSRDSSQHL-LCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDA 208
LH N +VG+Y + S + +C E + GSL+ L + + K+++
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAV 113
Query: 209 ARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF 268
+GL YL E + ++HRD K SNIL+ + K+ DFG++ Q + N +GT
Sbjct: 114 IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF----VGTR 167
Query: 269 GYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPV 304
Y++PE H V+SD++S G+ L+E+ GR P+
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 96/215 (44%), Gaps = 17/215 (7%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQG----DKEFLVEVEMLSRL 150
A +FE LG+G FG V+ + ++ Q + + EVE+ S L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
H N+++L GY+ D+++ L E P G++ + L D + + A
Sbjct: 67 RHPNILRLYGYF--HDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELAN 120
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
L+Y H VIHRD K N+LL + K+ADFG + AP R T + GT Y
Sbjct: 121 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTDLCGTLDY 173
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 305
+ PE K D++S GV+ E L G+ P +
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 96/215 (44%), Gaps = 17/215 (7%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQG----DKEFLVEVEMLSRL 150
A +FE LG+G FG V+ + ++ Q + + EVE+ S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
H N+++L GY+ D+++ L E P G++ + L D + + A
Sbjct: 66 RHPNILRLYGYF--HDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELAN 119
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
L+Y H VIHRD K N+LL + K+ADFG + AP R T + GT Y
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTDLCGTLDY 172
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 305
+ PE K D++S GV+ E L G+ P +
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 96/215 (44%), Gaps = 17/215 (7%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQG----DKEFLVEVEMLSRL 150
A +FE LG+G FG V+ + + ++ Q + + EVE+ S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
H N+++L GY+ DS++ L E P G++ + L D + + A
Sbjct: 66 RHPNILRLYGYF--HDSTRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELAN 119
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
L+Y H VIHRD K N+LL + K+ADFG + AP R L GT Y
Sbjct: 120 ALSYCHSKK---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTLDY 172
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 305
+ PE K D++S GV+ E L G+ P +
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 96/215 (44%), Gaps = 17/215 (7%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQG----DKEFLVEVEMLSRL 150
A +FE LG+G FG V+ + ++ Q + + EVE+ S L
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
H N+++L GY+ D+++ L E P G++ + L D + + A
Sbjct: 65 RHPNILRLYGYF--HDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELAN 118
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
L+Y H VIHRD K N+LL + K+ADFG + AP R T + GT Y
Sbjct: 119 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTTLCGTLDY 171
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 305
+ PE K D++S GV+ E L G+ P +
Sbjct: 172 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 206
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 101/206 (49%), Gaps = 27/206 (13%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
+G+G FG V G G VA+K + + FL E ++++L H NLV+L+G
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 165 RDSSQHLLCYELVPNGSLESWLHG----PLGVNCHLDWETRMKIALDAARGLAYLHEDSQ 220
+++ E + GSL +L LG +C L K +LD + YL ++
Sbjct: 71 EKGGLYIVT-EYMAKGSLVDYLRSRGRSVLGGDCLL------KFSLDVCEAMEYLEGNN- 122
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMT 278
+HRD A N+L+ + AKV+DFGL K+A ST+ G + APE
Sbjct: 123 --FVHRDLAARNVLVSEDNVAKVSDFGLTKEAS-------STQDTGKLPVKWTAPEALRE 173
Query: 279 GHLLVKSDVYSYGVVLLELLT-GRKP 303
KSDV+S+G++L E+ + GR P
Sbjct: 174 KKFSTKSDVWSFGILLWEIYSFGRVP 199
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 133/286 (46%), Gaps = 37/286 (12%)
Query: 104 ILGEGGFGRVFKGVLS----DGTAVAIKRLTCG-GQQGDKEFLVEVEMLSRLHHRNLVKL 158
++G G FG V G L VAIK L G ++ ++FL E ++ + H N++ L
Sbjct: 40 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHL 99
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHED 218
G + S+ ++ E + NGSL+S+L G + ++ A G+ YL +
Sbjct: 100 EGVVTK--STPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLR---GIAAGMKYLADM 154
Query: 219 SQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMG---TFGYVAPEY 275
+ +HRD A NIL+ +N KV+DFGL++ + ++ T +G + APE
Sbjct: 155 N---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEA 211
Query: 276 AMTGHLLVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARPILRDKDRLEEL-A 333
SDV+SYG+V+ E+++ G +P W + ++D + +
Sbjct: 212 IQYRKFTSASDVWSYGIVMWEVMSYGERPY-------------WD---MTNQDVINAIEQ 255
Query: 334 DPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSL-KMVQ 378
D RL P + + + C + N RP G++V +L KM++
Sbjct: 256 DYRLPP--PMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIR 299
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 96/215 (44%), Gaps = 17/215 (7%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQG----DKEFLVEVEMLSRL 150
A +FE LG+G FG V+ + ++ Q + + EVE+ S L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
H N+++L GY+ D+++ L E P G++ + L D + + A
Sbjct: 67 RHPNILRLYGYF--HDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELAN 120
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
L+Y H VIHRD K N+LL + K+ADFG + AP R + L GT Y
Sbjct: 121 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLC----GTLDY 173
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 305
+ PE K D++S GV+ E L G+ P +
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 109/219 (49%), Gaps = 16/219 (7%)
Query: 87 LAYEELKEATNNFEPASILGEGGFGRVFK-GVLSDGTAVAIKRLTCGGQQGDKEFLVEVE 145
+A ELK+ ++FE S LG G G VFK G +A K + + + ++
Sbjct: 1 MALGELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR-- 56
Query: 146 MLSRLHHRNLVKLVGYYSSRDSSQHL-LCYELVPNGSLESWLHGPLGVNCHLDWETRMKI 204
L LH N +VG+Y + S + +C E + GSL+ L + + K+
Sbjct: 57 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA----GRIPEQILGKV 112
Query: 205 ALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRV 264
++ +GL YL E + ++HRD K SNIL+ + K+ DFG++ Q + ++
Sbjct: 113 SIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDEMANEF 166
Query: 265 MGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
+GT Y++PE H V+SD++S G+ L+E+ GR P
Sbjct: 167 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 107/216 (49%), Gaps = 16/216 (7%)
Query: 91 ELKEATNNFEPASILGEGGFGRVFK-GVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSR 149
ELK+ ++FE S LG G G VFK G +A K + + + ++ L
Sbjct: 2 ELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR--ELQV 57
Query: 150 LHHRNLVKLVGYYSSRDSSQHL-LCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDA 208
LH N +VG+Y + S + +C E + GSL+ L + + K+++
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA----GRIPEQILGKVSIAV 113
Query: 209 ARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF 268
+GL YL E + ++HRD K SNIL+ + K+ DFG++ Q + N +GT
Sbjct: 114 IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF----VGTR 167
Query: 269 GYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPV 304
Y++PE H V+SD++S G+ L+E+ GR P+
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 107/216 (49%), Gaps = 16/216 (7%)
Query: 91 ELKEATNNFEPASILGEGGFGRVFK-GVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSR 149
ELK+ ++FE S LG G G VFK G +A K + + + ++ L
Sbjct: 2 ELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR--ELQV 57
Query: 150 LHHRNLVKLVGYYSSRDSSQHL-LCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDA 208
LH N +VG+Y + S + +C E + GSL+ L + + K+++
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA----GRIPEQILGKVSIAV 113
Query: 209 ARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF 268
+GL YL E + ++HRD K SNIL+ + K+ DFG++ Q + N +GT
Sbjct: 114 IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF----VGTR 167
Query: 269 GYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPV 304
Y++PE H V+SD++S G+ L+E+ GR P+
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 101/206 (49%), Gaps = 27/206 (13%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
+G+G FG V G G VA+K + + FL E ++++L H NLV+L+G
Sbjct: 29 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 165 RDSSQHLLCYELVPNGSLESWLHG----PLGVNCHLDWETRMKIALDAARGLAYLHEDSQ 220
+++ E + GSL +L LG +C L K +LD + YL ++
Sbjct: 86 EKGGLYIVT-EYMAKGSLVDYLRSRGRSVLGGDCLL------KFSLDVCEAMEYLEGNN- 137
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMT 278
+HRD A N+L+ + AKV+DFGL K+A ST+ G + APE
Sbjct: 138 --FVHRDLAARNVLVSEDNVAKVSDFGLTKEAS-------STQDTGKLPVKWTAPEALRE 188
Query: 279 GHLLVKSDVYSYGVVLLELLT-GRKP 303
KSDV+S+G++L E+ + GR P
Sbjct: 189 KKFSTKSDVWSFGILLWEIYSFGRVP 214
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 96/215 (44%), Gaps = 17/215 (7%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQG----DKEFLVEVEMLSRL 150
A +FE LG+G FG V+ + ++ Q + + EVE+ S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
H N+++L GY+ D+++ L E P G++ + L D + + A
Sbjct: 69 RHPNILRLYGYF--HDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELAN 122
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
L+Y H VIHRD K N+LL + K+ADFG + AP R T + GT Y
Sbjct: 123 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTTLCGTLDY 175
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 305
+ PE K D++S GV+ E L G+ P +
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 96/215 (44%), Gaps = 17/215 (7%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQG----DKEFLVEVEMLSRL 150
A +FE LG+G FG V+ + ++ Q + + EVE+ S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
H N+++L GY+ D+++ L E P G++ + L D + + A
Sbjct: 66 RHPNILRLYGYF--HDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELAN 119
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
L+Y H VIHRD K N+LL + K+ADFG + AP R T + GT Y
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTXLCGTLDY 172
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 305
+ PE K D++S GV+ E L G+ P +
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 96/215 (44%), Gaps = 17/215 (7%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQG----DKEFLVEVEMLSRL 150
A +FE LG+G FG V+ + ++ Q + + EVE+ S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
H N+++L GY+ D+++ L E P G++ + L D + + A
Sbjct: 71 RHPNILRLYGYF--HDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELAN 124
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
L+Y H VIHRD K N+LL + K+ADFG + AP R T + GT Y
Sbjct: 125 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTDLCGTLDY 177
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 305
+ PE K D++S GV+ E L G+ P +
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 141/321 (43%), Gaps = 46/321 (14%)
Query: 69 ADAVTLGGSLPHPTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDG----TA 123
+ +T G P+ R L E F+ +LG G FG V+KG+ + +G
Sbjct: 28 VEPLTPSGEAPNQALLRILKETE-------FKKIKVLGSGAFGTVYKGLWIPEGEKVKIP 80
Query: 124 VAIKRL-TCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSL 182
VAI L + +KE L E +++ + + ++ +L+G + S L +L+P G L
Sbjct: 81 VAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT---STVQLITQLMPFGCL 137
Query: 183 ESWLH---GPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNF 239
++ +G L+W + A+G+ YL ED + ++HRD A N+L++
Sbjct: 138 LDYVREHKDNIGSQYLLNW------CVQIAKGMNYL-EDRR--LVHRDLAARNVLVKTPQ 188
Query: 240 HAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
H K+ DFGLAK Y + ++A E + +SDV+SYGV + EL+T
Sbjct: 189 HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 248
Query: 300 -GRKPVDMSQPSGQENLVTWARPILRDKDRLEELADPRLGGKYPKEDFIRVCTIAAACVA 358
G KP D P+ + IL +RL + P I V I C
Sbjct: 249 FGSKPYD-GIPASE------ISSILEKGERLPQ----------PPICTIDVYMIMVKCWM 291
Query: 359 PEANQRPTMGEVVQSLKMVQR 379
+A+ RP E++ + R
Sbjct: 292 IDADSRPKFRELIIEFSKMAR 312
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 101/206 (49%), Gaps = 27/206 (13%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
+G+G FG V G G VA+K + + FL E ++++L H NLV+L+G
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 165 RDSSQHLLCYELVPNGSLESWLHG----PLGVNCHLDWETRMKIALDAARGLAYLHEDSQ 220
+++ E + GSL +L LG +C L K +LD + YL ++
Sbjct: 77 EKGGLYIVT-EYMAKGSLVDYLRSRGRSVLGGDCLL------KFSLDVCEAMEYLEGNN- 128
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMT 278
+HRD A N+L+ + AKV+DFGL K+A ST+ G + APE
Sbjct: 129 --FVHRDLAARNVLVSEDNVAKVSDFGLTKEAS-------STQDTGKLPVKWTAPEALRE 179
Query: 279 GHLLVKSDVYSYGVVLLELLT-GRKP 303
KSDV+S+G++L E+ + GR P
Sbjct: 180 AAFSTKSDVWSFGILLWEIYSFGRVP 205
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 114/238 (47%), Gaps = 25/238 (10%)
Query: 79 PH----PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGVLS----DGTAVAIKRLT 130
PH PT T +EL +ATN ++G G FG V G L +VAIK L
Sbjct: 25 PHTFEDPTQTVHEFAKEL-DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK 82
Query: 131 CG-GQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWL--H 187
G ++ ++FL E ++ + H N+++L G + S ++ E + NGSL+S+L H
Sbjct: 83 VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKH 140
Query: 188 GPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFG 247
L + + A G+ YL S +HRD A NIL+ +N KV+DFG
Sbjct: 141 DAQFTVIQL-----VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFG 192
Query: 248 LAKQAPEGRTNYLSTRVMGT-FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 303
LA+ + +TR + +PE SDV+SYG+VL E+++ G +P
Sbjct: 193 LARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 96/215 (44%), Gaps = 17/215 (7%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQG----DKEFLVEVEMLSRL 150
A +FE LG+G FG V+ + ++ Q + + EVE+ S L
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
H N+++L GY+ D+++ L E P G++ + L D + + A
Sbjct: 70 RHPNILRLYGYF--HDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELAN 123
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
L+Y H VIHRD K N+LL + K+ADFG + AP R T + GT Y
Sbjct: 124 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTTLCGTLDY 176
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 305
+ PE K D++S GV+ E L G+ P +
Sbjct: 177 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 211
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 107/216 (49%), Gaps = 16/216 (7%)
Query: 91 ELKEATNNFEPASILGEGGFGRVFK-GVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSR 149
ELK+ ++FE S LG G G VFK G +A K + + + ++ L
Sbjct: 21 ELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR--ELQV 76
Query: 150 LHHRNLVKLVGYYSSRDSSQHL-LCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDA 208
LH N +VG+Y + S + +C E + GSL+ L + + K+++
Sbjct: 77 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA----GRIPEQILGKVSIAV 132
Query: 209 ARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF 268
+GL YL E + ++HRD K SNIL+ + K+ DFG++ Q + N +GT
Sbjct: 133 IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF----VGTR 186
Query: 269 GYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPV 304
Y++PE H V+SD++S G+ L+E+ GR P+
Sbjct: 187 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 222
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 143/340 (42%), Gaps = 41/340 (12%)
Query: 55 KSKASPKETAKPRTADAVTLGGSLPHPTSTRFLAYEELKEATNNFEPASILGEGGFGRVF 114
K K PK + + ++ G S T+ E+ + NN + LG G FG+V
Sbjct: 5 KYKQKPKYQVRWKIIESYE-GNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVV 63
Query: 115 K------GVLSDGTAVAIKRLTCGGQQGDKEFLV-EVEMLSRL-HHRNLVKLVGYYSSRD 166
+ G VA+K L +KE L+ E++++S L H N+V L+G +
Sbjct: 64 EATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLG--ACTH 121
Query: 167 SSQHLLCYELVPNGSLESWLHGPLGV----------NCHLDWETRMKIALDAARGLAYLH 216
L+ E G L ++L V N L + + A+G+A+L
Sbjct: 122 GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLA 181
Query: 217 EDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYA 276
S+ C IHRD A N+LL N AK+ DFGLA+ + ++APE
Sbjct: 182 --SKNC-IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESI 238
Query: 277 MTGHLLVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARPILRDKDRLEELADP 335
V+SDV+SYG++L E+ + G P P N + +++D ++A P
Sbjct: 239 FDCVYTVQSDVWSYGILLWEIFSLGLNPY----PGILVNSKFYK--LVKDG---YQMAQP 289
Query: 336 RLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLK 375
K + +I AC A E RPT ++ L+
Sbjct: 290 AFAPK-------NIYSIMQACWALEPTHRPTFQQICSFLQ 322
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 95/215 (44%), Gaps = 17/215 (7%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQG----DKEFLVEVEMLSRL 150
A +FE LG+G FG V+ + ++ Q + + EVE+ S L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
H N+++L GY+ D+++ L E P G++ + L D + + A
Sbjct: 68 RHPNILRLYGYF--HDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELAN 121
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
L+Y H VIHRD K N+LL + K+ADFG + AP R L GT Y
Sbjct: 122 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDY 174
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 305
+ PE K D++S GV+ E L G+ P +
Sbjct: 175 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 143/336 (42%), Gaps = 37/336 (11%)
Query: 55 KSKASPKETAKPRTADAVTLGGSLPHPTSTRFLAYEELKEATNNFEPASILGEGGFGRVF 114
K K PK + + ++ G S T+ E+ + NN + LG G FG+V
Sbjct: 5 KYKQKPKYQVRWKIIESYE-GNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVV 63
Query: 115 K------GVLSDGTAVAIKRLTCGGQQGDKEFLV-EVEMLSRL-HHRNLVKLVGYYSSRD 166
+ G VA+K L +KE L+ E++++S L H N+V L+G +
Sbjct: 64 EATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLG--ACTH 121
Query: 167 SSQHLLCYELVPNGSLESWLHGPLGVNCH------LDWETRMKIALDAARGLAYLHEDSQ 220
L+ E G L ++L + L+ + + A+G+A+L S+
Sbjct: 122 GGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLA--SK 179
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGH 280
C IHRD A N+LL N AK+ DFGLA+ + ++APE
Sbjct: 180 NC-IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCV 238
Query: 281 LLVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARPILRDKDRLEELADPRLGG 339
V+SDV+SYG++L E+ + G P P N + +++D ++A P
Sbjct: 239 YTVQSDVWSYGILLWEIFSLGLNPY----PGILVNSKFYK--LVKDG---YQMAQPAFAP 289
Query: 340 KYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLK 375
K + +I AC A E RPT ++ L+
Sbjct: 290 K-------NIYSIMQACWALEPTHRPTFQQICSFLQ 318
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 114/238 (47%), Gaps = 25/238 (10%)
Query: 79 PH----PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGVLS----DGTAVAIKRLT 130
PH PT T +EL +ATN ++G G FG V G L +VAIK L
Sbjct: 25 PHTFEDPTQTVHEFAKEL-DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK 82
Query: 131 CG-GQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWL--H 187
G ++ ++FL E ++ + H N+++L G + S ++ E + NGSL+S+L H
Sbjct: 83 VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEXMENGSLDSFLRKH 140
Query: 188 GPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFG 247
L + + A G+ YL S +HRD A NIL+ +N KV+DFG
Sbjct: 141 DAQFTVIQL-----VGMLRGIASGMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFG 192
Query: 248 LAKQAPEGRTNYLSTRVMGT-FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 303
L++ + +TR + +PE SDV+SYG+VL E+++ G +P
Sbjct: 193 LSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 113/230 (49%), Gaps = 23/230 (10%)
Query: 84 TRFLAYEELKE---ATNNFEPASILGEGGFGRVFK-GVLSDGTAVAIKRLTCGGQQ---G 136
RFL ++ L+ N F +LG+GGFG V V + G A K+L + G
Sbjct: 168 NRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKG 227
Query: 137 DKEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH--GPLGVNC 194
+ L E ++L +++ R +V L Y ++D+ L L+ G L+ ++ G G
Sbjct: 228 EAMALNEKQILEKVNSRFVVSLAYAYETKDAL--CLVLTLMNGGDLKFHIYHMGQAGFP- 284
Query: 195 HLDWETRMKI-ALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAP 253
E R A + GL LH + +++RD K NILL+++ H +++D GLA P
Sbjct: 285 ----EARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVP 337
Query: 254 EGRTNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
EG+T + RV GT GY+APE D ++ G +L E++ G+ P
Sbjct: 338 EGQT--IKGRV-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 101/220 (45%), Gaps = 42/220 (19%)
Query: 105 LGEGGFGRVFKGVLS------DGTAVAIKRL--TCGGQQGDKEFLVEVEMLSRLHHRNLV 156
LG G FG V++G +S VA+K L C +Q + +FL+E ++S+L+H+N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKLNHQNIV 97
Query: 157 KLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETR--------------M 202
+ +G S S + EL+ G L+S+L ETR +
Sbjct: 98 RCIGV--SLQSLPRFILLELMAGGDLKSFLR-----------ETRPRPSQPSSLAMLDLL 144
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLE---NNFHAKVADFGLAKQAPEGRTNY 259
+A D A G YL E+ IHRD A N LL AK+ DFG+A+
Sbjct: 145 HVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 201
Query: 260 LSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
M ++ PE M G K+D +S+GV+L E+ +
Sbjct: 202 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 101/220 (45%), Gaps = 42/220 (19%)
Query: 105 LGEGGFGRVFKGVLS------DGTAVAIKRL--TCGGQQGDKEFLVEVEMLSRLHHRNLV 156
LG G FG V++G +S VA+K L C +Q + +FL+E ++S+L+H+N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKLNHQNIV 111
Query: 157 KLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETR--------------M 202
+ +G S S + EL+ G L+S+L ETR +
Sbjct: 112 RCIGV--SLQSLPRFILLELMAGGDLKSFLR-----------ETRPRPSQPSSLAMLDLL 158
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLE---NNFHAKVADFGLAKQAPEGRTNY 259
+A D A G YL E+ IHRD A N LL AK+ DFG+A+
Sbjct: 159 HVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 215
Query: 260 LSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
M ++ PE M G K+D +S+GV+L E+ +
Sbjct: 216 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 113/230 (49%), Gaps = 23/230 (10%)
Query: 84 TRFLAYEELKE---ATNNFEPASILGEGGFGRVFK-GVLSDGTAVAIKRLTCGGQQ---G 136
RFL ++ L+ N F +LG+GGFG V V + G A K+L + G
Sbjct: 168 NRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKG 227
Query: 137 DKEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH--GPLGVNC 194
+ L E ++L +++ R +V L Y ++D+ L L+ G L+ ++ G G
Sbjct: 228 EAMALNEKQILEKVNSRFVVSLAYAYETKDAL--CLVLTLMNGGDLKFHIYHMGQAGFP- 284
Query: 195 HLDWETRMKI-ALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAP 253
E R A + GL LH + +++RD K NILL+++ H +++D GLA P
Sbjct: 285 ----EARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVP 337
Query: 254 EGRTNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
EG+T + RV GT GY+APE D ++ G +L E++ G+ P
Sbjct: 338 EGQT--IKGRV-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 135/298 (45%), Gaps = 41/298 (13%)
Query: 92 LKEATNNFEPASILGEGGFGRVFKGV-LSDG----TAVAIKRL-TCGGQQGDKEFLVEVE 145
LKE F+ +LG G FG V+KG+ + +G VAIK L + +KE L E
Sbjct: 16 LKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 73
Query: 146 MLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH---GPLGVNCHLDWETRM 202
+++ + + ++ +L+G + S L +L+P G L ++ +G L+W
Sbjct: 74 VMASVDNPHVCRLLGICLT---STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW---- 126
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
+ A+G+ YL ED + ++HRD A N+L++ H K+ DFG AK Y +
Sbjct: 127 --CVQIAKGMNYL-EDRR--LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 181
Query: 263 RVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARP 321
++A E + +SDV+SYGV + EL+T G KP D P+ +
Sbjct: 182 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE------ISS 234
Query: 322 ILRDKDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMVQR 379
IL +RL + P I V I C +A+ RP E++ + R
Sbjct: 235 ILEKGERLPQ----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 282
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 135/298 (45%), Gaps = 41/298 (13%)
Query: 92 LKEATNNFEPASILGEGGFGRVFKGV-LSDG----TAVAIKRL-TCGGQQGDKEFLVEVE 145
LKE F+ +L G FG V+KG+ + +G VAIK L + +KE L E
Sbjct: 19 LKE--TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 146 MLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH---GPLGVNCHLDWETRM 202
+++ + + ++ +L+G + S L +L+P G L ++ +G L+W
Sbjct: 77 VMASVDNPHVCRLLGICLT---STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW---- 129
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
+ A+G+ YL ED + ++HRD A N+L++ H K+ DFGLAK Y +
Sbjct: 130 --CVQIAKGMNYL-EDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 184
Query: 263 RVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARP 321
++A E + +SDV+SYGV + EL+T G KP D P+ +
Sbjct: 185 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE------ISS 237
Query: 322 ILRDKDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMVQR 379
IL +RL + P I V I C +A+ RP E++ + R
Sbjct: 238 ILEKGERLPQ----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 285
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 135/298 (45%), Gaps = 41/298 (13%)
Query: 92 LKEATNNFEPASILGEGGFGRVFKGV-LSDG----TAVAIKRL-TCGGQQGDKEFLVEVE 145
LKE F+ +LG G FG V+KG+ + +G VAIK L + +KE L E
Sbjct: 14 LKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 146 MLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH---GPLGVNCHLDWETRM 202
+++ + + ++ +L+G + S L +L+P G L ++ +G L+W
Sbjct: 72 VMASVDNPHVCRLLGICLT---STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW---- 124
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
+ A+G+ YL ED + ++HRD A N+L++ H K+ DFG AK Y +
Sbjct: 125 --CVQIAKGMNYL-EDRR--LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 179
Query: 263 RVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARP 321
++A E + +SDV+SYGV + EL+T G KP D P+ +
Sbjct: 180 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE------ISS 232
Query: 322 ILRDKDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMVQR 379
IL +RL + P I V I C +A+ RP E++ + R
Sbjct: 233 ILEKGERLPQ----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 280
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 104/210 (49%), Gaps = 22/210 (10%)
Query: 105 LGEGGFGRVF----KGVLSDG--TAVAIKRLTCGGQQGDK-EFLVEVEMLSRLHHRNLVK 157
LG+G FG V+ KGV+ D T VAIK + ++ EFL E ++ + ++V+
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWL--------HGPLGVNCHLDWETRMKIALDAA 209
L+G S + L+ EL+ G L+S+L + P+ L +++A + A
Sbjct: 78 LLGVVSQGQPT--LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS--KMIQMAGEIA 133
Query: 210 RGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFG 269
G+AYL+ + +HRD A N ++ +F K+ DFG+ + E + +
Sbjct: 134 DGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 190
Query: 270 YVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
+++PE G SDV+S+GVVL E+ T
Sbjct: 191 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 96/215 (44%), Gaps = 17/215 (7%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQG----DKEFLVEVEMLSRL 150
A +FE LG+G FG V+ + ++ Q + + EVE+ S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
H N+++L GY+ D+++ L E P G++ + L D + + A
Sbjct: 69 RHPNILRLYGYF--HDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELAN 122
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
L+Y H VIHRD K N+LL + K+ADFG + AP R + L GT Y
Sbjct: 123 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC----GTLDY 175
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 305
+ PE K D++S GV+ E L G+ P +
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 135/298 (45%), Gaps = 41/298 (13%)
Query: 92 LKEATNNFEPASILGEGGFGRVFKGV-LSDG----TAVAIKRL-TCGGQQGDKEFLVEVE 145
LKE F+ +L G FG V+KG+ + +G VAIK L + +KE L E
Sbjct: 12 LKE--TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 146 MLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH---GPLGVNCHLDWETRM 202
+++ + + ++ +L+G + S L +L+P G L ++ +G L+W
Sbjct: 70 VMASVDNPHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW---- 122
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
+ A+G+ YL ED + ++HRD A N+L++ H K+ DFGLAK Y +
Sbjct: 123 --CVQIAKGMNYL-EDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
Query: 263 RVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARP 321
++A E + +SDV+SYGV + EL+T G KP D P+ +
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE------ISS 230
Query: 322 ILRDKDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMVQR 379
IL +RL + P I V I C +A+ RP E++ + R
Sbjct: 231 ILEKGERLPQ----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 114/238 (47%), Gaps = 25/238 (10%)
Query: 79 PH----PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGVLS----DGTAVAIKRLT 130
PH PT T +EL +ATN ++G G FG V G L +VAIK L
Sbjct: 25 PHTFEDPTQTVHEFAKEL-DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK 82
Query: 131 CG-GQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWL--H 187
G ++ ++FL E ++ + H N+++L G + S ++ E + NGSL+S+L H
Sbjct: 83 VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKH 140
Query: 188 GPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFG 247
L + + A G+ YL S +HRD A NIL+ +N KV+DFG
Sbjct: 141 DAQFTVIQL-----VGMLRGIASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFG 192
Query: 248 LAKQAPEGRTNYLSTRVMGT-FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 303
L++ + +TR + +PE SDV+SYG+VL E+++ G +P
Sbjct: 193 LSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 96/215 (44%), Gaps = 17/215 (7%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQG----DKEFLVEVEMLSRL 150
A +FE LG+G FG V+ + ++ Q + + EVE+ S L
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
H N+++L GY+ D+++ L E P G++ + L D + + A
Sbjct: 63 RHPNILRLYGYF--HDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELAN 116
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
L+Y H VIHRD K N+LL + K+ADFG + AP R T + GT Y
Sbjct: 117 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTTLCGTLDY 169
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 305
+ PE K D++S GV+ E L G+ P +
Sbjct: 170 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 204
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 135/298 (45%), Gaps = 41/298 (13%)
Query: 92 LKEATNNFEPASILGEGGFGRVFKGV-LSDG----TAVAIKRL-TCGGQQGDKEFLVEVE 145
LKE F+ +L G FG V+KG+ + +G VAIK L + +KE L E
Sbjct: 19 LKE--TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 146 MLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH---GPLGVNCHLDWETRM 202
+++ + + ++ +L+G + S L +L+P G L ++ +G L+W
Sbjct: 77 VMASVDNPHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW---- 129
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
+ A+G+ YL ED + ++HRD A N+L++ H K+ DFGLAK Y +
Sbjct: 130 --CVQIAKGMNYL-EDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 184
Query: 263 RVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARP 321
++A E + +SDV+SYGV + EL+T G KP D P+ +
Sbjct: 185 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE------ISS 237
Query: 322 ILRDKDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMVQR 379
IL +RL + P I V I C +A+ RP E++ + R
Sbjct: 238 ILEKGERLPQ----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 285
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 135/298 (45%), Gaps = 41/298 (13%)
Query: 92 LKEATNNFEPASILGEGGFGRVFKGV-LSDG----TAVAIKRL-TCGGQQGDKEFLVEVE 145
LKE F+ +LG G FG V+KG+ + +G VAIK L + +KE L E
Sbjct: 12 LKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 146 MLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH---GPLGVNCHLDWETRM 202
+++ + + ++ +L+G + S L +L+P G L ++ +G L+W
Sbjct: 70 VMASVDNPHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW---- 122
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
+ A+G+ YL ED + ++HRD A N+L++ H K+ DFG AK Y +
Sbjct: 123 --CVQIAKGMNYL-EDRR--LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 177
Query: 263 RVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARP 321
++A E + +SDV+SYGV + EL+T G KP D P+ +
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE------ISS 230
Query: 322 ILRDKDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMVQR 379
IL +RL + P I V I C +A+ RP E++ + R
Sbjct: 231 ILEKGERLPQ----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 126/273 (46%), Gaps = 37/273 (13%)
Query: 105 LGEGGFGRVFKGVLS-DGTAVAIKRLTCGGQQGDKEFLV-EVEMLSRLHHRNLVKLVGYY 162
+G+G FG VFKG+ + VAIK + + + E + E+ +LS+ + K G Y
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 89
Query: 163 SSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIAL-DAARGLAYLHEDSQP 221
+D+ ++ L +L+ GPL ET++ L + +GL YLH + +
Sbjct: 90 L-KDTKLWIIMEYLGGGSALDLLEPGPLD-------ETQIATILREILKGLDYLHSEKK- 140
Query: 222 CVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGHL 281
IHRD KA+N+LL + K+ADFG+A Q + T +GT ++APE
Sbjct: 141 --IHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNXFVGTPFWMAPEVIKQSAY 196
Query: 282 LVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRLEELADPRLGGKY 341
K+D++S G+ +EL G P P L+ P P L G Y
Sbjct: 197 DSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PTLEGNY 243
Query: 342 --PKEDFIRVCTIAAACVAPEANQRPTMGEVVQ 372
P ++F+ AC+ E + RPT E+++
Sbjct: 244 SKPLKEFVE------ACLNKEPSFRPTAKELLK 270
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 126/273 (46%), Gaps = 37/273 (13%)
Query: 105 LGEGGFGRVFKGVLS-DGTAVAIKRLTCGGQQGDKEFLV-EVEMLSRLHHRNLVKLVGYY 162
+G+G FG VFKG+ + VAIK + + + E + E+ +LS+ + K G Y
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 94
Query: 163 SSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIAL-DAARGLAYLHEDSQP 221
+D+ ++ L +L+ GPL ET++ L + +GL YLH + +
Sbjct: 95 L-KDTKLWIIMEYLGGGSALDLLEPGPLD-------ETQIATILREILKGLDYLHSEKK- 145
Query: 222 CVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGHL 281
IHRD KA+N+LL + K+ADFG+A Q + T +GT ++APE
Sbjct: 146 --IHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNTFVGTPFWMAPEVIKQSAY 201
Query: 282 LVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRLEELADPRLGGKY 341
K+D++S G+ +EL G P P L+ P P L G Y
Sbjct: 202 DSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PTLEGNY 248
Query: 342 --PKEDFIRVCTIAAACVAPEANQRPTMGEVVQ 372
P ++F+ AC+ E + RPT E+++
Sbjct: 249 SKPLKEFVE------ACLNKEPSFRPTAKELLK 275
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 126/273 (46%), Gaps = 37/273 (13%)
Query: 105 LGEGGFGRVFKGVLS-DGTAVAIKRLTCGGQQGDKEFLV-EVEMLSRLHHRNLVKLVGYY 162
+G+G FG VFKG+ + VAIK + + + E + E+ +LS+ + K G Y
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 163 SSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIAL-DAARGLAYLHEDSQP 221
+D+ ++ L +L+ GPL ET++ L + +GL YLH + +
Sbjct: 75 L-KDTKLWIIMEYLGGGSALDLLEPGPLD-------ETQIATILREILKGLDYLHSEKK- 125
Query: 222 CVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGHL 281
IHRD KA+N+LL + K+ADFG+A Q + T +GT ++APE
Sbjct: 126 --IHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNXFVGTPFWMAPEVIKQSAY 181
Query: 282 LVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRLEELADPRLGGKY 341
K+D++S G+ +EL G P P L+ P P L G Y
Sbjct: 182 DSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PTLEGNY 228
Query: 342 --PKEDFIRVCTIAAACVAPEANQRPTMGEVVQ 372
P ++F+ AC+ E + RPT E+++
Sbjct: 229 SKPLKEFVE------ACLNKEPSFRPTAKELLK 255
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 95/215 (44%), Gaps = 17/215 (7%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQG----DKEFLVEVEMLSRL 150
A +FE LG+G FG V+ + ++ Q + + EVE+ S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
H N+++L GY+ D+++ L E P G++ + L D + + A
Sbjct: 66 RHPNILRLYGYF--HDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELAN 119
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
L+Y H VIHRD K N+LL + K+ADFG + AP R L GT Y
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDY 172
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 305
+ PE K D++S GV+ E L G+ P +
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 114/238 (47%), Gaps = 25/238 (10%)
Query: 79 PH----PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGVLS----DGTAVAIKRLT 130
PH PT T +EL +ATN ++G G FG V G L +VAIK L
Sbjct: 25 PHTYEDPTQTVHEFAKEL-DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK 82
Query: 131 CG-GQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWL--H 187
G ++ ++FL E ++ + H N+++L G + S ++ E + NGSL+S+L H
Sbjct: 83 VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKH 140
Query: 188 GPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFG 247
L + + A G+ YL S +HRD A NIL+ +N KV+DFG
Sbjct: 141 DAQFTVIQL-----VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFG 192
Query: 248 LAKQAPEGRTNYLSTRVMGT-FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 303
L++ + +TR + +PE SDV+SYG+VL E+++ G +P
Sbjct: 193 LSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 114/238 (47%), Gaps = 25/238 (10%)
Query: 79 PH----PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGVLS----DGTAVAIKRLT 130
PH PT T +EL +ATN ++G G FG V G L +VAIK L
Sbjct: 25 PHTFEDPTQTVHEFAKEL-DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK 82
Query: 131 CG-GQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWL--H 187
G ++ ++FL E ++ + H N+++L G + S ++ E + NGSL+S+L H
Sbjct: 83 VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKH 140
Query: 188 GPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFG 247
L + + A G+ YL S +HRD A NIL+ +N KV+DFG
Sbjct: 141 DAQFTVIQL-----VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFG 192
Query: 248 LAKQAPEGRTNYLSTRVMGT-FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 303
L++ + +TR + +PE SDV+SYG+VL E+++ G +P
Sbjct: 193 LSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 95/215 (44%), Gaps = 17/215 (7%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQG----DKEFLVEVEMLSRL 150
A +FE LG+G FG V+ + ++ Q + + EVE+ S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
H N+++L GY+ D+++ L E P G++ + L D + + A
Sbjct: 69 RHPNILRLYGYF--HDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELAN 122
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
L+Y H VIHRD K N+LL + K+ADFG + AP R L GT Y
Sbjct: 123 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDY 175
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 305
+ PE K D++S GV+ E L G+ P +
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 104/210 (49%), Gaps = 22/210 (10%)
Query: 105 LGEGGFGRVF----KGVLSDG--TAVAIKRLTCGGQQGDK-EFLVEVEMLSRLHHRNLVK 157
LG+G FG V+ KGV+ D T VAIK + ++ EFL E ++ + ++V+
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWL--------HGPLGVNCHLDWETRMKIALDAA 209
L+G S + L+ EL+ G L+S+L + P+ L +++A + A
Sbjct: 87 LLGVVSQGQPT--LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS--KMIQMAGEIA 142
Query: 210 RGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFG 269
G+AYL+ + +HRD A N ++ +F K+ DFG+ + E + +
Sbjct: 143 DGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 199
Query: 270 YVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
+++PE G SDV+S+GVVL E+ T
Sbjct: 200 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 96/215 (44%), Gaps = 17/215 (7%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQG----DKEFLVEVEMLSRL 150
A +FE LG+G FG V+ + ++ Q + + EVE+ S L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
H N+++L GY+ D+++ L E P G++ + L D + + A
Sbjct: 68 RHPNILRLYGYF--HDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELAN 121
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
L+Y H VIHRD K N+LL + K+A+FG + AP R T + GT Y
Sbjct: 122 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR----RTTLCGTLDY 174
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 305
+ PE K D++S GV+ E L G+ P +
Sbjct: 175 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 135/298 (45%), Gaps = 41/298 (13%)
Query: 92 LKEATNNFEPASILGEGGFGRVFKGV-LSDG----TAVAIKRL-TCGGQQGDKEFLVEVE 145
LKE F+ +LG G FG V+KG+ + +G VAIK L + +KE L E
Sbjct: 19 LKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 146 MLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH---GPLGVNCHLDWETRM 202
+++ + + ++ +L+G + S L +L+P G L ++ +G L+W
Sbjct: 77 VMASVDNPHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW---- 129
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
+ A+G+ YL ED + ++HRD A N+L++ H K+ DFG AK Y +
Sbjct: 130 --CVQIAKGMNYL-EDRR--LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 184
Query: 263 RVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARP 321
++A E + +SDV+SYGV + EL+T G KP D P+ +
Sbjct: 185 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE------ISS 237
Query: 322 ILRDKDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMVQR 379
IL +RL + P I V I C +A+ RP E++ + R
Sbjct: 238 ILEKGERLPQ----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 285
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 114/238 (47%), Gaps = 25/238 (10%)
Query: 79 PH----PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGVLS----DGTAVAIKRLT 130
PH PT T +EL +ATN ++G G FG V G L +VAIK L
Sbjct: 25 PHTYEDPTQTVHEFAKEL-DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK 82
Query: 131 CG-GQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWL--H 187
G ++ ++FL E ++ + H N+++L G + S ++ E + NGSL+S+L H
Sbjct: 83 VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEXMENGSLDSFLRKH 140
Query: 188 GPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFG 247
L + + A G+ YL S +HRD A NIL+ +N KV+DFG
Sbjct: 141 DAQFTVIQL-----VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFG 192
Query: 248 LAKQAPEGRTNYLSTRVMGT-FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 303
L++ + +TR + +PE SDV+SYG+VL E+++ G +P
Sbjct: 193 LSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 105/210 (50%), Gaps = 22/210 (10%)
Query: 105 LGEGGFGRVF----KGVLSDG--TAVAIKRLTCGGQQGDK-EFLVEVEMLSRLHHRNLVK 157
LG+G FG V+ KGV+ D T VAIK + ++ EFL E ++ + ++V+
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWLHG--PLGVNCHL----DWETRMKIALDAARG 211
L+G S + L+ EL+ G L+S+L P N + +++A + A G
Sbjct: 93 LLGVVSQGQPT--LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADG 150
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFG-- 269
+AYL+ + +HRD A N ++ +F K+ DFG+ + E T+Y G
Sbjct: 151 MAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE--TDYYRKGGKGLLPVR 205
Query: 270 YVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
+++PE G SDV+S+GVVL E+ T
Sbjct: 206 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 114/238 (47%), Gaps = 25/238 (10%)
Query: 79 PH----PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGVLS----DGTAVAIKRLT 130
PH PT T +EL +ATN ++G G FG V G L +VAIK L
Sbjct: 25 PHTYEDPTQTVHEFAKEL-DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK 82
Query: 131 CG-GQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWL--H 187
G ++ ++FL E ++ + H N+++L G + S ++ E + NGSL+S+L H
Sbjct: 83 VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKH 140
Query: 188 GPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFG 247
L + + A G+ YL S +HRD A NIL+ +N KV+DFG
Sbjct: 141 DAQFTVIQL-----VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFG 192
Query: 248 LAKQAPEGRTNYLSTRVMGT-FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 303
L++ + +TR + +PE SDV+SYG+VL E+++ G +P
Sbjct: 193 LSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 95/215 (44%), Gaps = 17/215 (7%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQG----DKEFLVEVEMLSRL 150
A +FE LG+G FG V+ + ++ Q + + EVE+ S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
H N+++L GY+ D+++ L E P G++ + L D + + A
Sbjct: 69 RHPNILRLYGYF--HDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELAN 122
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
L+Y H VIHRD K N+LL + K+ADFG + AP R L GT Y
Sbjct: 123 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTLDY 175
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 305
+ PE K D++S GV+ E L G+ P +
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 114/238 (47%), Gaps = 25/238 (10%)
Query: 79 PH----PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGVLS----DGTAVAIKRLT 130
PH PT T +EL +ATN ++G G FG V G L +VAIK L
Sbjct: 25 PHTFEDPTQTVHEFAKEL-DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK 82
Query: 131 CG-GQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWL--H 187
G ++ ++FL E ++ + H N+++L G + S ++ E + NGSL+S+L H
Sbjct: 83 VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKH 140
Query: 188 GPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFG 247
L + + A G+ YL S +HRD A NIL+ +N KV+DFG
Sbjct: 141 DAQFTVIQL-----VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFG 192
Query: 248 LAKQAPEGRTNYLSTRVMGT-FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 303
L++ + +TR + +PE SDV+SYG+VL E+++ G +P
Sbjct: 193 LSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 126/273 (46%), Gaps = 37/273 (13%)
Query: 105 LGEGGFGRVFKGVLS-DGTAVAIKRLTCGGQQGDKEFLV-EVEMLSRLHHRNLVKLVGYY 162
+G+G FG VFKG+ + VAIK + + + E + E+ +LS+ + K G Y
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 163 SSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIAL-DAARGLAYLHEDSQP 221
+D+ ++ L +L+ GPL ET++ L + +GL YLH + +
Sbjct: 75 L-KDTKLWIIMEYLGGGSALDLLEPGPLD-------ETQIATILREILKGLDYLHSEKK- 125
Query: 222 CVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGHL 281
IHRD KA+N+LL + K+ADFG+A Q + T +GT ++APE
Sbjct: 126 --IHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNTFVGTPFWMAPEVIKQSAY 181
Query: 282 LVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRLEELADPRLGGKY 341
K+D++S G+ +EL G P P L+ P P L G Y
Sbjct: 182 DSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PTLEGNY 228
Query: 342 --PKEDFIRVCTIAAACVAPEANQRPTMGEVVQ 372
P ++F+ AC+ E + RPT E+++
Sbjct: 229 SKPLKEFVE------ACLNKEPSFRPTAKELLK 255
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 122/295 (41%), Gaps = 52/295 (17%)
Query: 105 LGEGGFGRVFKGVL------SDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKL 158
LGEG FG+VF D VA+K L + ++F E E+L+ L H+++V+
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWLH-----------------GPLGVNCHLDWETR 201
G + + L+ +E + +G L +L GPLG+
Sbjct: 86 FGVCT--EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLG------QL 137
Query: 202 MKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLS 261
+ +A A G+ YL + +HRD N L+ K+ DFG+++ +
Sbjct: 138 LAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVG 194
Query: 262 TRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWAR 320
R M ++ PE + +SDV+S+GVVL E+ T G++P + + +T R
Sbjct: 195 GRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGR 254
Query: 321 PILRDKDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLK 375
EL PR P E V I C E QR ++ +V L+
Sbjct: 255 ----------ELERPR---ACPPE----VYAIMRGCWQREPQQRHSIKDVHARLQ 292
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 122/295 (41%), Gaps = 52/295 (17%)
Query: 105 LGEGGFGRVFKGVL------SDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKL 158
LGEG FG+VF D VA+K L + ++F E E+L+ L H+++V+
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWLH-----------------GPLGVNCHLDWETR 201
G + + L+ +E + +G L +L GPLG+
Sbjct: 80 FGVCT--EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLG------QL 131
Query: 202 MKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLS 261
+ +A A G+ YL + +HRD N L+ K+ DFG+++ +
Sbjct: 132 LAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVG 188
Query: 262 TRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWAR 320
R M ++ PE + +SDV+S+GVVL E+ T G++P + + +T R
Sbjct: 189 GRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGR 248
Query: 321 PILRDKDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLK 375
EL PR P E V I C E QR ++ +V L+
Sbjct: 249 ----------ELERPR---ACPPE----VYAIMRGCWQREPQQRHSIKDVHARLQ 286
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 114/238 (47%), Gaps = 25/238 (10%)
Query: 79 PH----PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGVLS----DGTAVAIKRLT 130
PH PT T +EL +ATN ++G G FG V G L +VAIK L
Sbjct: 23 PHTYEDPTQTVHEFAKEL-DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK 80
Query: 131 CG-GQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWL--H 187
G ++ ++FL E ++ + H N+++L G + S ++ E + NGSL+S+L H
Sbjct: 81 VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKH 138
Query: 188 GPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFG 247
L + + A G+ YL S +HRD A NIL+ +N KV+DFG
Sbjct: 139 DAQFTVIQL-----VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFG 190
Query: 248 LAKQAPEGRTNYLSTRVMGT-FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 303
L++ + +TR + +PE SDV+SYG+VL E+++ G +P
Sbjct: 191 LSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 248
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 104/206 (50%), Gaps = 17/206 (8%)
Query: 105 LGEGGFGRVFKGVL---SDGTAVAIKRLTCGGQQGD-KEFLVEVEMLSRLHHRNLVKLVG 160
LG G FG V +GV VAIK L G ++ D +E + E +++ +L + +V+L+G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 161 YYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQ 220
+ +L E+ G L +L +G + ++ + G+ YL E +
Sbjct: 78 VCQA---EALMLVMEMAGGGPLHKFL---VGKREEIPVSNVAELLHQVSMGMKYLEEKN- 130
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMT 278
+HRD A N+LL N +AK++DFGL+K A +Y + R G + + APE
Sbjct: 131 --FVHRDLAARNVLLVNRHYAKISDFGLSK-ALGADDSYYTARSAGKWPLKWYAPECINF 187
Query: 279 GHLLVKSDVYSYGVVLLELLT-GRKP 303
+SDV+SYGV + E L+ G+KP
Sbjct: 188 RKFSSRSDVWSYGVTMWEALSYGQKP 213
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 105/226 (46%), Gaps = 32/226 (14%)
Query: 98 NFEPASILGEGGFGRVFKGVLS-DGTAVAIKRLTCGGQQGDKE-FLVEVEMLSRLHHRNL 155
+FEP LG GGFG VF+ D AIKR+ ++ +E + EV+ L++L H +
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 65
Query: 156 VKLVGYYSSRDSSQHL----------LCYELVPNGSLESWLHGPLGVNCHLDWETR---M 202
V+ + +++++ L + +L +L+ W++G C ++ R +
Sbjct: 66 VRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNG----RCTIEERERSVCL 121
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGL--AKQAPEGRTNYL 260
I L A + +LH ++HRD K SNI + KV DFGL A E L
Sbjct: 122 HIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 178
Query: 261 S--------TRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELL 298
+ T +GT Y++PE K D++S G++L ELL
Sbjct: 179 TPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 105/210 (50%), Gaps = 22/210 (10%)
Query: 105 LGEGGFGRVF----KGVLSDG--TAVAIKRLTCGGQQGDK-EFLVEVEMLSRLHHRNLVK 157
LG+G FG V+ KGV+ D T VAIK + ++ EFL E ++ + ++V+
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWLHG--PLGVNCHL----DWETRMKIALDAARG 211
L+G S + L+ EL+ G L+S+L P N + +++A + A G
Sbjct: 83 LLGVVSQGQPT--LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADG 140
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFG-- 269
+AYL+ + +HRD A N ++ +F K+ DFG+ + E T+Y G
Sbjct: 141 MAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE--TDYYRKGGKGLLPVR 195
Query: 270 YVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
+++PE G SDV+S+GVVL E+ T
Sbjct: 196 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 135/298 (45%), Gaps = 41/298 (13%)
Query: 92 LKEATNNFEPASILGEGGFGRVFKGV-LSDG----TAVAIKRL-TCGGQQGDKEFLVEVE 145
LKE F+ +LG G FG V+KG+ + +G VAIK L + +KE L E
Sbjct: 14 LKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 146 MLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH---GPLGVNCHLDWETRM 202
+++ + + ++ +L+G + S L +L+P G L ++ +G L+W
Sbjct: 72 VMASVDNPHVCRLLGICLT---STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW---- 124
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
+ A+G+ YL ED + ++HRD A N+L++ H K+ DFG AK Y +
Sbjct: 125 --CVQIAKGMNYL-EDRR--LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 179
Query: 263 RVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARP 321
++A E + +SDV+SYGV + EL+T G KP D P+ +
Sbjct: 180 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE------ISS 232
Query: 322 ILRDKDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMVQR 379
IL +RL + P I V I C +A+ RP E++ + R
Sbjct: 233 ILEKGERLPQ----------PPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 280
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 100/220 (45%), Gaps = 42/220 (19%)
Query: 105 LGEGGFGRVFKGVLS------DGTAVAIKRL--TCGGQQGDKEFLVEVEMLSRLHHRNLV 156
LG G FG V++G +S VA+K L C +Q + +FL+E ++S+ +H+N+V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKFNHQNIV 96
Query: 157 KLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETR--------------M 202
+ +G S S + EL+ G L+S+L ETR +
Sbjct: 97 RCIGV--SLQSLPRFILMELMAGGDLKSFLR-----------ETRPRPSQPSSLAMLDLL 143
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLE---NNFHAKVADFGLAKQAPEGRTNY 259
+A D A G YL E+ IHRD A N LL AK+ DFG+A+
Sbjct: 144 HVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 200
Query: 260 LSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
M ++ PE M G K+D +S+GV+L E+ +
Sbjct: 201 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 105/214 (49%), Gaps = 24/214 (11%)
Query: 102 ASILGEGGFGRVFKGVLS--DGTA--VAIK--RLTCGGQQGDKEFLVEVEMLSRLHHRNL 155
ILGEG FG V +G L DGT+ VA+K +L Q+ +EFL E + H N+
Sbjct: 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNV 98
Query: 156 VKLVGY---YSSRDSSQHLLCYELVPNGSLESWL------HGPLGVNCHLDWETRMKIAL 206
++L+G SS+ + ++ + G L ++L GP H+ +T +K +
Sbjct: 99 IRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGP----KHIPLQTLLKFMV 154
Query: 207 DAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMG 266
D A G+ YL S +HRD A N +L ++ VADFGL+K+ G Y R+
Sbjct: 155 DIALGMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSG-DYYRQGRIAK 210
Query: 267 T-FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
++A E KSDV+++GV + E+ T
Sbjct: 211 MPVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 113/237 (47%), Gaps = 20/237 (8%)
Query: 76 GSLPHPTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGVLS----DGTAVAIKRLTC 131
G +P ++ + + +ATN ++G G FG V G L +VAIK L
Sbjct: 13 GLVPRGSTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV 71
Query: 132 G-GQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWL--HG 188
G ++ ++FL E ++ + H N+++L G + S ++ E + NGSL+S+L H
Sbjct: 72 GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHD 129
Query: 189 PLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGL 248
L + + A G+ YL S +HRD A NIL+ +N KV+DFGL
Sbjct: 130 AQFTVIQL-----VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGL 181
Query: 249 AKQAPEGRTNYLSTRVMGT-FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 303
++ + +TR + +PE SDV+SYG+VL E+++ G +P
Sbjct: 182 SRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 238
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 113/227 (49%), Gaps = 23/227 (10%)
Query: 90 EELKEAT-----NNFEPASI-LGEGGFGRVFKGVL---SDGTAVAIKRLTCGGQQGD-KE 139
EELK+ +N A I LG G FG V +GV VAIK L G ++ D +E
Sbjct: 323 EELKDKKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEE 382
Query: 140 FLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWE 199
+ E +++ +L + +V+L+G + +L E+ G L +L +G +
Sbjct: 383 MMREAQIMHQLDNPYIVRLIGVCQA---EALMLVMEMAGGGPLHKFL---VGKREEIPVS 436
Query: 200 TRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNY 259
++ + G+ YL E + +HR+ A N+LL N +AK++DFGL+K A +Y
Sbjct: 437 NVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSK-ALGADDSY 492
Query: 260 LSTRVMGTF--GYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 303
+ R G + + APE +SDV+SYGV + E L+ G+KP
Sbjct: 493 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP 539
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 95/215 (44%), Gaps = 17/215 (7%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQG----DKEFLVEVEMLSRL 150
A +FE LG+G FG V+ + ++ Q + + EVE+ S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
H N+++L GY+ D+++ L E P G++ + L D + + A
Sbjct: 66 RHPNILRLYGYF--HDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELAN 119
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
L+Y H VIHRD K N+LL + K+ADFG + AP R L GT Y
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTLDY 172
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 305
+ PE K D++S GV+ E L G+ P +
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 96/215 (44%), Gaps = 17/215 (7%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQG----DKEFLVEVEMLSRL 150
A +FE LG+G FG V+ + ++ Q + + EVE+ S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
H N+++L GY+ D+++ L E P G++ + L D + + A
Sbjct: 69 RHPNILRLYGYF--HDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELAN 122
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
L+Y H VIHRD K N+LL + K+A+FG + AP R T + GT Y
Sbjct: 123 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR----RTTLCGTLDY 175
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 305
+ PE K D++S GV+ E L G+ P +
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 100/220 (45%), Gaps = 42/220 (19%)
Query: 105 LGEGGFGRVFKGVLS------DGTAVAIKRL--TCGGQQGDKEFLVEVEMLSRLHHRNLV 156
LG G FG V++G +S VA+K L C +Q + +FL+E ++S+ +H+N+V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKFNHQNIV 96
Query: 157 KLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETR--------------M 202
+ +G S S + EL+ G L+S+L ETR +
Sbjct: 97 RCIGV--SLQSLPRFILLELMAGGDLKSFLR-----------ETRPRPSQPSSLAMLDLL 143
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLE---NNFHAKVADFGLAKQAPEGRTNY 259
+A D A G YL E+ IHRD A N LL AK+ DFG+A+
Sbjct: 144 HVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 200
Query: 260 LSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
M ++ PE M G K+D +S+GV+L E+ +
Sbjct: 201 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 113/238 (47%), Gaps = 25/238 (10%)
Query: 79 PH----PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGVLS----DGTAVAIKRLT 130
PH PT T +EL +ATN ++G G FG V G L +VAIK L
Sbjct: 25 PHTFEDPTQTVHEFAKEL-DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK 82
Query: 131 CG-GQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWL--H 187
G ++ ++FL E ++ + H N+++L G + S ++ E + NGSL+S+L H
Sbjct: 83 VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKH 140
Query: 188 GPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFG 247
L + + A G+ YL S +HRD A NIL+ +N KV+DFG
Sbjct: 141 DAQFTVIQL-----VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFG 192
Query: 248 LAKQAPEGRTNYLSTRVMGT-FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 303
L + + +TR + +PE SDV+SYG+VL E+++ G +P
Sbjct: 193 LGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 100/220 (45%), Gaps = 42/220 (19%)
Query: 105 LGEGGFGRVFKGVLS------DGTAVAIKRL--TCGGQQGDKEFLVEVEMLSRLHHRNLV 156
LG G FG V++G +S VA+K L C +Q + +FL+E ++S+ +H+N+V
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKFNHQNIV 88
Query: 157 KLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETR--------------M 202
+ +G S S + EL+ G L+S+L ETR +
Sbjct: 89 RCIGV--SLQSLPRFILLELMAGGDLKSFLR-----------ETRPRPSQPSSLAMLDLL 135
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLE---NNFHAKVADFGLAKQAPEGRTNY 259
+A D A G YL E+ IHRD A N LL AK+ DFG+A+
Sbjct: 136 HVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 192
Query: 260 LSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
M ++ PE M G K+D +S+GV+L E+ +
Sbjct: 193 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 122/295 (41%), Gaps = 52/295 (17%)
Query: 105 LGEGGFGRVFKGVL------SDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKL 158
LGEG FG+VF D VA+K L + ++F E E+L+ L H+++V+
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWLH-----------------GPLGVNCHLDWETR 201
G + + L+ +E + +G L +L GPLG+
Sbjct: 109 FGVCT--EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLG------QL 160
Query: 202 MKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLS 261
+ +A A G+ YL + +HRD N L+ K+ DFG+++ +
Sbjct: 161 LAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVG 217
Query: 262 TRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWAR 320
R M ++ PE + +SDV+S+GVVL E+ T G++P + + +T R
Sbjct: 218 GRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGR 277
Query: 321 PILRDKDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLK 375
EL PR P E V I C E QR ++ +V L+
Sbjct: 278 ----------ELERPR---ACPPE----VYAIMRGCWQREPQQRHSIKDVHARLQ 315
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 100/220 (45%), Gaps = 42/220 (19%)
Query: 105 LGEGGFGRVFKGVLS------DGTAVAIKRL--TCGGQQGDKEFLVEVEMLSRLHHRNLV 156
LG G FG V++G +S VA+K L C +Q + +FL+E ++S+ +H+N+V
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKFNHQNIV 113
Query: 157 KLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETR--------------M 202
+ +G S S + EL+ G L+S+L ETR +
Sbjct: 114 RCIGV--SLQSLPRFILLELMAGGDLKSFLR-----------ETRPRPSQPSSLAMLDLL 160
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLE---NNFHAKVADFGLAKQAPEGRTNY 259
+A D A G YL E+ IHRD A N LL AK+ DFG+A+
Sbjct: 161 HVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 217
Query: 260 LSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
M ++ PE M G K+D +S+GV+L E+ +
Sbjct: 218 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 100/220 (45%), Gaps = 42/220 (19%)
Query: 105 LGEGGFGRVFKGVLS------DGTAVAIKRL--TCGGQQGDKEFLVEVEMLSRLHHRNLV 156
LG G FG V++G +S VA+K L C +Q + +FL+E ++S+ +H+N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKFNHQNIV 111
Query: 157 KLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETR--------------M 202
+ +G S S + EL+ G L+S+L ETR +
Sbjct: 112 RCIGV--SLQSLPRFILMELMAGGDLKSFLR-----------ETRPRPSQPSSLAMLDLL 158
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLE---NNFHAKVADFGLAKQAPEGRTNY 259
+A D A G YL E+ IHRD A N LL AK+ DFG+A+
Sbjct: 159 HVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 215
Query: 260 LSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
M ++ PE M G K+D +S+GV+L E+ +
Sbjct: 216 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 106/212 (50%), Gaps = 26/212 (12%)
Query: 105 LGEGGFGRVF----KGVLSDG--TAVAIKRLTCGGQQGDK-EFLVEVEMLSRLHHRNLVK 157
LG+G FG V+ KGV+ D T VAIK + ++ EFL E ++ + ++V+
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWL--------HGPLGVNCHLDWETRMKIALDAA 209
L+G S + L+ EL+ G L+S+L + P+ L +++A + A
Sbjct: 93 LLGVVSQGQPT--LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS--KMIQMAGEIA 148
Query: 210 RGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFG 269
G+AYL+ + +HRD A N ++ +F K+ DFG+ + E T+Y G
Sbjct: 149 DGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE--TDYYRKGGKGLLP 203
Query: 270 --YVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
+++PE G SDV+S+GVVL E+ T
Sbjct: 204 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 135/298 (45%), Gaps = 41/298 (13%)
Query: 92 LKEATNNFEPASILGEGGFGRVFKGV-LSDG----TAVAIKRL-TCGGQQGDKEFLVEVE 145
LKE F+ +LG G FG V+KG+ + +G VAIK L + +KE L E
Sbjct: 14 LKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 146 MLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH---GPLGVNCHLDWETRM 202
+++ + + ++ +L+G + S L +L+P G L ++ +G L+W
Sbjct: 72 VMASVDNPHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW---- 124
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
+ A+G+ YL ED + ++HRD A N+L++ H K+ DFG AK Y +
Sbjct: 125 --CVQIAKGMNYL-EDRR--LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 179
Query: 263 RVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARP 321
++A E + +SDV+SYGV + EL+T G KP D P+ +
Sbjct: 180 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE------ISS 232
Query: 322 ILRDKDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMVQR 379
IL +RL + P I V I C +A+ RP E++ + R
Sbjct: 233 ILEKGERLPQ----------PPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 280
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 100/220 (45%), Gaps = 42/220 (19%)
Query: 105 LGEGGFGRVFKGVLS------DGTAVAIKRL--TCGGQQGDKEFLVEVEMLSRLHHRNLV 156
LG G FG V++G +S VA+K L C +Q + +FL+E ++S+ +H+N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKFNHQNIV 97
Query: 157 KLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETR--------------M 202
+ +G S S + EL+ G L+S+L ETR +
Sbjct: 98 RCIGV--SLQSLPRFILLELMAGGDLKSFLR-----------ETRPRPSQPSSLAMLDLL 144
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLE---NNFHAKVADFGLAKQAPEGRTNY 259
+A D A G YL E+ IHRD A N LL AK+ DFG+A+
Sbjct: 145 HVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 201
Query: 260 LSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
M ++ PE M G K+D +S+GV+L E+ +
Sbjct: 202 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 104/214 (48%), Gaps = 17/214 (7%)
Query: 93 KEATNNFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFLVEVEMLSRLH 151
K+ F+ LGEG +G V+K + + G VAIK++ + +E + E+ ++ +
Sbjct: 25 KQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPV--ESDLQEIIKEISIMQQCD 82
Query: 152 HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARG 211
++VK G Y ++ + E GS+ + N L + I +G
Sbjct: 83 SPHVVKYYGSYFK--NTDLWIVMEYCGAGSVSDIIRLR---NKTLTEDEIATILQSTLKG 137
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTR--VMGTFG 269
L YLH + IHRD KA NILL HAK+ADFG+A Q T+ ++ R V+GT
Sbjct: 138 LEYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGVAGQL----TDXMAKRNXVIGTPF 190
Query: 270 YVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
++APE +D++S G+ +E+ G+ P
Sbjct: 191 WMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPP 224
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 144/340 (42%), Gaps = 41/340 (12%)
Query: 55 KSKASPKETAKPRTADAVTLGGSLPHPTSTRFLAYEELKEATNNFEPASILGEGGFGRVF 114
K K PK + + ++ G S T+ E+ + NN + LG G FG+V
Sbjct: 5 KYKQKPKYQVRWKIIESYE-GNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVV 63
Query: 115 K------GVLSDGTAVAIKRLTCGGQQGDKEFLV-EVEMLSRL-HHRNLVKLVGYYSSRD 166
+ G VA+K L +KE L+ E++++S L H N+V L+G +
Sbjct: 64 EATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLG--ACTH 121
Query: 167 SSQHLLCYELVPNGSLESWLH--------GPLGVNCHLDWETR--MKIALDAARGLAYLH 216
L+ E G L ++L P + TR + + A+G+A+L
Sbjct: 122 GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA 181
Query: 217 EDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYA 276
S+ C IHRD A N+LL N AK+ DFGLA+ + ++APE
Sbjct: 182 --SKNC-IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESI 238
Query: 277 MTGHLLVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARPILRDKDRLEELADP 335
V+SDV+SYG++L E+ + G P P N + +++D ++A P
Sbjct: 239 FDCVYTVQSDVWSYGILLWEIFSLGLNPY----PGILVNSKFYK--LVKDG---YQMAQP 289
Query: 336 RLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLK 375
K + +I AC A E RPT ++ L+
Sbjct: 290 AFAPK-------NIYSIMQACWALEPTHRPTFQQICSFLQ 322
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 106/212 (50%), Gaps = 26/212 (12%)
Query: 105 LGEGGFGRVF----KGVLSDG--TAVAIKRLTCGGQQGDK-EFLVEVEMLSRLHHRNLVK 157
LG+G FG V+ KGV+ D T VAIK + ++ EFL E ++ + ++V+
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWL--------HGPLGVNCHLDWETRMKIALDAA 209
L+G S + L+ EL+ G L+S+L + P+ L +++A + A
Sbjct: 80 LLGVVSQGQPT--LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS--KMIQMAGEIA 135
Query: 210 RGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFG 269
G+AYL+ + +HRD A N ++ +F K+ DFG+ + E T+Y G
Sbjct: 136 DGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE--TDYYRKGGKGLLP 190
Query: 270 --YVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
+++PE G SDV+S+GVVL E+ T
Sbjct: 191 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 97 NNFEPASILGEGGFGRVFKGVLS----DGTAVAIKRLTCG-GQQGDKEFLVEVEMLSRLH 151
N ++G G FG V G L +VAIK L G ++ ++FL E ++ +
Sbjct: 16 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 75
Query: 152 HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWL--HGPLGVNCHLDWETRMKIALDAA 209
H N+++L G + S ++ E + NGSL+S+L H L + + A
Sbjct: 76 HPNIIRLEGVVTK--SKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIA 128
Query: 210 RGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT-F 268
G+ YL S +HRD A NIL+ +N KV+DFGL++ + +TR
Sbjct: 129 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 185
Query: 269 GYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 303
+ +PE SDV+SYG+VL E+++ G +P
Sbjct: 186 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 100/220 (45%), Gaps = 42/220 (19%)
Query: 105 LGEGGFGRVFKGVLS------DGTAVAIKRL--TCGGQQGDKEFLVEVEMLSRLHHRNLV 156
LG G FG V++G +S VA+K L C +Q + +FL+E ++S+ +H+N+V
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKFNHQNIV 123
Query: 157 KLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETR--------------M 202
+ +G S S + EL+ G L+S+L ETR +
Sbjct: 124 RCIGV--SLQSLPRFILLELMAGGDLKSFLR-----------ETRPRPSQPSSLAMLDLL 170
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLE---NNFHAKVADFGLAKQAPEGRTNY 259
+A D A G YL E+ IHRD A N LL AK+ DFG+A+
Sbjct: 171 HVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 227
Query: 260 LSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
M ++ PE M G K+D +S+GV+L E+ +
Sbjct: 228 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 100/220 (45%), Gaps = 42/220 (19%)
Query: 105 LGEGGFGRVFKGVLS------DGTAVAIKRL--TCGGQQGDKEFLVEVEMLSRLHHRNLV 156
LG G FG V++G +S VA+K L C +Q + +FL+E ++S+ +H+N+V
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKFNHQNIV 103
Query: 157 KLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETR--------------M 202
+ +G S S + EL+ G L+S+L ETR +
Sbjct: 104 RCIGV--SLQSLPRFILLELMAGGDLKSFLR-----------ETRPRPSQPSSLAMLDLL 150
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLE---NNFHAKVADFGLAKQAPEGRTNY 259
+A D A G YL E+ IHRD A N LL AK+ DFG+A+
Sbjct: 151 HVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 207
Query: 260 LSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
M ++ PE M G K+D +S+GV+L E+ +
Sbjct: 208 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 97 NNFEPASILGEGGFGRVFKGVLS----DGTAVAIKRLTCG-GQQGDKEFLVEVEMLSRLH 151
N ++G G FG V G L +VAIK L G ++ ++FL E ++ +
Sbjct: 16 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 75
Query: 152 HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWL--HGPLGVNCHLDWETRMKIALDAA 209
H N+++L G + S ++ E + NGSL+S+L H L + + A
Sbjct: 76 HPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIA 128
Query: 210 RGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT-F 268
G+ YL S +HRD A NIL+ +N KV+DFGL++ + +TR
Sbjct: 129 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 185
Query: 269 GYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 303
+ +PE SDV+SYG+VL E+++ G +P
Sbjct: 186 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 106/212 (50%), Gaps = 26/212 (12%)
Query: 105 LGEGGFGRVF----KGVLSDG--TAVAIKRLTCGGQQGDK-EFLVEVEMLSRLHHRNLVK 157
LG+G FG V+ KGV+ D T VAIK + ++ EFL E ++ + ++V+
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWL--------HGPLGVNCHLDWETRMKIALDAA 209
L+G S + L+ EL+ G L+S+L + P+ L +++A + A
Sbjct: 86 LLGVVSQGQPT--LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS--KMIQMAGEIA 141
Query: 210 RGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFG 269
G+AYL+ + +HRD A N ++ +F K+ DFG+ + E T+Y G
Sbjct: 142 DGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE--TDYYRKGGKGLLP 196
Query: 270 --YVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
+++PE G SDV+S+GVVL E+ T
Sbjct: 197 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 106/212 (50%), Gaps = 26/212 (12%)
Query: 105 LGEGGFGRVF----KGVLSDG--TAVAIKRLTCGGQQGDK-EFLVEVEMLSRLHHRNLVK 157
LG+G FG V+ KGV+ D T VAIK + ++ EFL E ++ + ++V+
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWL--------HGPLGVNCHLDWETRMKIALDAA 209
L+G S + L+ EL+ G L+S+L + P+ L +++A + A
Sbjct: 86 LLGVVSQGQPT--LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS--KMIQMAGEIA 141
Query: 210 RGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFG 269
G+AYL+ + +HRD A N ++ +F K+ DFG+ + E T+Y G
Sbjct: 142 DGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE--TDYYRKGGKGLLP 196
Query: 270 --YVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
+++PE G SDV+S+GVVL E+ T
Sbjct: 197 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 100/220 (45%), Gaps = 42/220 (19%)
Query: 105 LGEGGFGRVFKGVLS------DGTAVAIKRL--TCGGQQGDKEFLVEVEMLSRLHHRNLV 156
LG G FG V++G +S VA+K L C +Q + +FL+E ++S+ +H+N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKFNHQNIV 97
Query: 157 KLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETR--------------M 202
+ +G S S + EL+ G L+S+L ETR +
Sbjct: 98 RCIGV--SLQSLPRFILLELMAGGDLKSFLR-----------ETRPRPSQPSSLAMLDLL 144
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLE---NNFHAKVADFGLAKQAPEGRTNY 259
+A D A G YL E+ IHRD A N LL AK+ DFG+A+
Sbjct: 145 HVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYR 201
Query: 260 LSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
M ++ PE M G K+D +S+GV+L E+ +
Sbjct: 202 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 106/212 (50%), Gaps = 26/212 (12%)
Query: 105 LGEGGFGRVF----KGVLSDG--TAVAIKRLTCGGQQGDK-EFLVEVEMLSRLHHRNLVK 157
LG+G FG V+ KGV+ D T VAIK + ++ EFL E ++ + ++V+
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWL--------HGPLGVNCHLDWETRMKIALDAA 209
L+G S + L+ EL+ G L+S+L + P+ L +++A + A
Sbjct: 84 LLGVVSQGQPT--LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS--KMIQMAGEIA 139
Query: 210 RGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFG 269
G+AYL+ + +HRD A N ++ +F K+ DFG+ + E T+Y G
Sbjct: 140 DGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE--TDYYRKGGKGLLP 194
Query: 270 --YVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
+++PE G SDV+S+GVVL E+ T
Sbjct: 195 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 144/342 (42%), Gaps = 43/342 (12%)
Query: 55 KSKASPKETAKPRTADAVTLGGSLPHPTSTRFLAYEELKEATNNFEPASILGEGGFGRVF 114
K K PK + + ++ G S T+ E+ + NN + LG G FG+V
Sbjct: 5 KYKQKPKYQVRWKIIESYE-GNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVV 63
Query: 115 K------GVLSDGTAVAIKRLTCGGQQGDKEFLV-EVEMLSRL-HHRNLVKLVGYYSSRD 166
+ G VA+K L +KE L+ E++++S L H N+V L+G +
Sbjct: 64 EATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLG--ACTH 121
Query: 167 SSQHLLCYELVPNGSLESWLHG--PLGVNC----------HLDWETRMKIALDAARGLAY 214
L+ E G L ++L P G+ L + + A+G+A+
Sbjct: 122 GGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAF 181
Query: 215 LHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPE 274
L S+ C IHRD A N+LL N AK+ DFGLA+ + ++APE
Sbjct: 182 L--ASKNC-IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPE 238
Query: 275 YAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARPILRDKDRLEELA 333
V+SDV+SYG++L E+ + G P P N + +++D ++A
Sbjct: 239 SIFDCVYTVQSDVWSYGILLWEIFSLGLNPY----PGILVNSKFYK--LVKDG---YQMA 289
Query: 334 DPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLK 375
P K + +I AC A E RPT ++ L+
Sbjct: 290 QPAFAPK-------NIYSIMQACWALEPTHRPTFQQICSFLQ 324
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 110/228 (48%), Gaps = 37/228 (16%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVE--VEMLSRLHHRN 154
+N + ++G G +G V+KG L D VA+K + +Q F+ E + + + H N
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQN---FINEKNIYRVPLMEHDN 68
Query: 155 LVKLV---GYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHL-DWETRMKIALDAAR 210
+ + + ++ ++LL E PNGSL +L + H DW + ++A R
Sbjct: 69 IARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL------SLHTSDWVSSCRLAHSVTR 122
Query: 211 GLAYLHED------SQPCVIHRDFKASNILLENNFHAKVADFGLA------KQAPEGRTN 258
GLAYLH + +P + HRD + N+L++N+ ++DFGL+ + G +
Sbjct: 123 GLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEED 182
Query: 259 YLSTRVMGTFGYVAPEYAMTGHL--------LVKSDVYSYGVVLLELL 298
+ +GT Y+APE + G + L + D+Y+ G++ E+
Sbjct: 183 NAAISEVGTIRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 99/219 (45%), Gaps = 40/219 (18%)
Query: 105 LGEGGFGRVFKGVLS------DGTAVAIKRLT-CGGQQGDKEFLVEVEMLSRLHHRNLVK 157
LG G FG V++G +S VA+K L +Q + +FL+E ++S+ +H+N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETR--------------MK 203
+G S S + EL+ G L+S+L ETR +
Sbjct: 113 CIGV--SLQSLPRFILLELMAGGDLKSFLR-----------ETRPRPSQPSSLAMLDLLH 159
Query: 204 IALDAARGLAYLHEDSQPCVIHRDFKASNILLE---NNFHAKVADFGLAKQAPEGRTNYL 260
+A D A G YL E+ IHRD A N LL AK+ DFG+A+
Sbjct: 160 VARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 216
Query: 261 STRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
M ++ PE M G K+D +S+GV+L E+ +
Sbjct: 217 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 95/212 (44%), Gaps = 17/212 (8%)
Query: 98 NFEPASILGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQG----DKEFLVEVEMLSRLHHR 153
+F+ LG+G FG V+ + ++ Q + + EVE+ S L H
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 154 NLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLA 213
N+++L GY+ D+++ L E P G++ + L D + + A L+
Sbjct: 73 NILRLYGYF--HDATRVYLILEYAPLGTV----YRELQKLSRFDEQRTATYITELANALS 126
Query: 214 YLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAP 273
Y H VIHRD K N+LL +N K+ADFG + AP R T + GT Y+ P
Sbjct: 127 YCHSKR---VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR----RTTLCGTLDYLPP 179
Query: 274 EYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 305
E K D++S GV+ E L G P +
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 106/212 (50%), Gaps = 26/212 (12%)
Query: 105 LGEGGFGRVF----KGVLSDG--TAVAIKRLTCGGQQGDK-EFLVEVEMLSRLHHRNLVK 157
LG+G FG V+ KGV+ D T VAIK + ++ EFL E ++ + ++V+
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWL--------HGPLGVNCHLDWETRMKIALDAA 209
L+G S + L+ EL+ G L+S+L + P+ L +++A + A
Sbjct: 87 LLGVVSQGQPT--LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS--KMIQMAGEIA 142
Query: 210 RGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFG 269
G+AYL+ + +HRD A N ++ +F K+ DFG+ + E T+Y G
Sbjct: 143 DGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE--TDYYRKGGKGLLP 197
Query: 270 --YVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
+++PE G SDV+S+GVVL E+ T
Sbjct: 198 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 127/288 (44%), Gaps = 43/288 (14%)
Query: 104 ILGEGGFGRVFKGV-LSDGTAVAIKRLTC-------GGQQGDKEFLVEVEMLSRLHHRNL 155
+LG G FG V KGV + +G ++ I C G+Q + + + L H ++
Sbjct: 38 VLGSGVFGTVHKGVWIPEGESIKIP--VCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHI 95
Query: 156 VKLVGYYSSRDSSQHLLCYELVPNGSLESWLH---GPLGVNCHLDWETRMKIALDAARGL 212
V+L+G S L + +P GSL + G LG L+W ++ A+G+
Sbjct: 96 VRLLGLCPG---SSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AKGM 146
Query: 213 AYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVA 272
YL E ++HR+ A N+LL++ +VADFG+A P L + ++A
Sbjct: 147 YYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMA 203
Query: 273 PEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARPILRDKDRLEE 331
E G +SDV+SYGV + EL+T G +P + + +L+ ++ E
Sbjct: 204 LESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLL----------EKGER 253
Query: 332 LADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMVQR 379
LA P++ I V + C + N RPT E+ + R
Sbjct: 254 LAQPQICT-------IDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 294
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 100/220 (45%), Gaps = 42/220 (19%)
Query: 105 LGEGGFGRVFKGVLS------DGTAVAIKRL--TCGGQQGDKEFLVEVEMLSRLHHRNLV 156
LG G FG V++G +S VA+K L C +Q + +FL+E ++S+ +H+N+V
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKFNHQNIV 114
Query: 157 KLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETR--------------M 202
+ +G S S + EL+ G L+S+L ETR +
Sbjct: 115 RCIGV--SLQSLPRFILLELMAGGDLKSFLR-----------ETRPRPSQPSSLAMLDLL 161
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLE---NNFHAKVADFGLAKQAPEGRTNY 259
+A D A G YL E+ IHRD A N LL AK+ DFG+A+
Sbjct: 162 HVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYR 218
Query: 260 LSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
M ++ PE M G K+D +S+GV+L E+ +
Sbjct: 219 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 100/220 (45%), Gaps = 42/220 (19%)
Query: 105 LGEGGFGRVFKGVLS------DGTAVAIKRL--TCGGQQGDKEFLVEVEMLSRLHHRNLV 156
LG G FG V++G +S VA+K L C +Q + +FL+E ++S+ +H+N+V
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKFNHQNIV 137
Query: 157 KLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETR--------------M 202
+ +G S S + EL+ G L+S+L ETR +
Sbjct: 138 RCIGV--SLQSLPRFILLELMAGGDLKSFLR-----------ETRPRPSQPSSLAMLDLL 184
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLE---NNFHAKVADFGLAKQAPEGRTNY 259
+A D A G YL E+ IHRD A N LL AK+ DFG+A+
Sbjct: 185 HVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYR 241
Query: 260 LSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
M ++ PE M G K+D +S+GV+L E+ +
Sbjct: 242 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 95/212 (44%), Gaps = 17/212 (8%)
Query: 98 NFEPASILGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQG----DKEFLVEVEMLSRLHHR 153
+F+ LG+G FG V+ + ++ Q + + EVE+ S L H
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 154 NLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLA 213
N+++L GY+ D+++ L E P G++ + L D + + A L+
Sbjct: 73 NILRLYGYF--HDATRVYLILEYAPLGTV----YRELQKLSRFDEQRTATYITELANALS 126
Query: 214 YLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAP 273
Y H VIHRD K N+LL +N K+ADFG + AP R + L GT Y+ P
Sbjct: 127 YCHSKR---VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLC----GTLDYLPP 179
Query: 274 EYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 305
E K D++S GV+ E L G P +
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 135/316 (42%), Gaps = 36/316 (11%)
Query: 75 GGSLPHPTSTRFLAYEELKEATNNFEPASILGEGGFGRVFK------GVLSDGTAVAIKR 128
G S T+ E+ + NN + LG G FG+V + G VA+K
Sbjct: 16 GNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKM 75
Query: 129 LTCGGQQGDKEFLV-EVEMLSRL-HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWL 186
L +KE L+ E++++S L H N+V L+G + L+ E G L ++L
Sbjct: 76 LKSTAHADEKEALMSELKIMSHLGQHENIVNLLG--ACTHGGPVLVITEYCCYGDLLNFL 133
Query: 187 HGPLGVNCH------LDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFH 240
+ L+ + + A+G+A+L S+ C IHRD A N+LL N
Sbjct: 134 RRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLA--SKNC-IHRDVAARNVLLTNGHV 190
Query: 241 AKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT- 299
AK+ DFGLA+ + ++APE V+SDV+SYG++L E+ +
Sbjct: 191 AKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSL 250
Query: 300 GRKPVDMSQPSGQENLVTWARPILRDKDRLEELADPRLGGKYPKEDFIRVCTIAAACVAP 359
G P P N + +++D ++A P K + +I AC A
Sbjct: 251 GLNPY----PGILVNSKFYK--LVKDG---YQMAQPAFAPK-------NIYSIMQACWAL 294
Query: 360 EANQRPTMGEVVQSLK 375
E RPT ++ L+
Sbjct: 295 EPTHRPTFQQICSFLQ 310
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 127/288 (44%), Gaps = 43/288 (14%)
Query: 104 ILGEGGFGRVFKGV-LSDGTAVAIKRLTC-------GGQQGDKEFLVEVEMLSRLHHRNL 155
+LG G FG V KGV + +G ++ I C G+Q + + + L H ++
Sbjct: 20 VLGSGVFGTVHKGVWIPEGESIKIP--VCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHI 77
Query: 156 VKLVGYYSSRDSSQHLLCYELVPNGSLESWLH---GPLGVNCHLDWETRMKIALDAARGL 212
V+L+G S L + +P GSL + G LG L+W ++ A+G+
Sbjct: 78 VRLLGLCPG---SSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AKGM 128
Query: 213 AYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVA 272
YL E ++HR+ A N+LL++ +VADFG+A P L + ++A
Sbjct: 129 YYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMA 185
Query: 273 PEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARPILRDKDRLEE 331
E G +SDV+SYGV + EL+T G +P + + +L+ ++ E
Sbjct: 186 LESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLL----------EKGER 235
Query: 332 LADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMVQR 379
LA P++ I V + C + N RPT E+ + R
Sbjct: 236 LAQPQICT-------IDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 106/212 (50%), Gaps = 26/212 (12%)
Query: 105 LGEGGFGRVF----KGVLSDG--TAVAIKRLTCGGQQGDK-EFLVEVEMLSRLHHRNLVK 157
LG+G FG V+ KGV+ D T VAIK + ++ EFL E ++ + ++V+
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWL--------HGPLGVNCHLDWETRMKIALDAA 209
L+G S + L+ EL+ G L+S+L + P+ L +++A + A
Sbjct: 115 LLGVVSQGQPT--LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS--KMIQMAGEIA 170
Query: 210 RGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFG 269
G+AYL+ + +HRD A N ++ +F K+ DFG+ + E T+Y G
Sbjct: 171 DGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE--TDYYRKGGKGLLP 225
Query: 270 --YVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
+++PE G SDV+S+GVVL E+ T
Sbjct: 226 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 133/287 (46%), Gaps = 39/287 (13%)
Query: 104 ILGEGGFGRVFKGVLS----DGTAVAIKRLTCG-GQQGDKEFLVEVEMLSRLHHRNLVKL 158
++G G FG V G L VAIK L G ++ ++FL E ++ + H N++ L
Sbjct: 14 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHL 73
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHED 218
G + S+ ++ E + NGSL+S+L G + ++ A G+ YL +
Sbjct: 74 EGVVTK--STPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLR---GIAAGMKYLADM 128
Query: 219 SQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMG---TFGYVAPEY 275
+ +HR A NIL+ +N KV+DFGL++ + ++ T +G + APE
Sbjct: 129 N---YVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEA 185
Query: 276 AMTGHLLVKSDVYSYGVVLLELLT-GRKPV-DMSQPSGQENLVTWARPILRDKDRLEEL- 332
SDV+SYG+V+ E+++ G +P DM+ ++D + +
Sbjct: 186 IQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMT-----------------NQDVINAIE 228
Query: 333 ADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSL-KMVQ 378
D RL P + + + C + N RP G++V +L KM++
Sbjct: 229 QDYRLPP--PMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIR 273
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 109/216 (50%), Gaps = 23/216 (10%)
Query: 104 ILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYY 162
+LG+G +G V+ G LS+ +AIK + + + E+ + L H+N+V+ +G +
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 163 SSRDSSQHLLCYELVPNGSLESWLH---GPLGVNCH-LDWETRMKIALDAARGLAYLHED 218
S + + E VP GSL + L GPL N + + T+ + GL YLH++
Sbjct: 89 SENGFIKIFM--EQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL-----EGLKYLHDN 141
Query: 219 SQPCVIHRDFKASNILLENNFHA--KVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYA 276
++HRD K N+L+ N + K++DFG +K+ N + GT Y+APE
Sbjct: 142 Q---IVHRDIKGDNVLI-NTYSGVLKISDFGTSKRL--AGINPCTETFTGTLQYMAPEII 195
Query: 277 MTG--HLLVKSDVYSYGVVLLELLTGRKPV-DMSQP 309
G +D++S G ++E+ TG+ P ++ +P
Sbjct: 196 DKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEP 231
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 92/208 (44%), Gaps = 18/208 (8%)
Query: 105 LGEGGFGRVFKGVLS----DGTAVAIKRL---TCGGQQGDKEFLVEVEMLSRLHHRNLVK 157
LG+G FG V +G +VA+K L + +F+ EV + L HRNL++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHE 217
L G + + EL P GSL L G H T + A+ A G+ YL
Sbjct: 80 LYGVVLTPPMK---MVTELAPLGSLLDRLRKHQG---HFLLGTLSRYAVQVAEGMGYLES 133
Query: 218 DSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT-FGYVAPEYA 276
IHRD A N+LL K+ DFGL + P+ +Y+ F + APE
Sbjct: 134 KR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 190
Query: 277 MTGHLLVKSDVYSYGVVLLELLT-GRKP 303
T SD + +GV L E+ T G++P
Sbjct: 191 KTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 92/208 (44%), Gaps = 18/208 (8%)
Query: 105 LGEGGFGRVFKGVLS----DGTAVAIKRL---TCGGQQGDKEFLVEVEMLSRLHHRNLVK 157
LG+G FG V +G +VA+K L + +F+ EV + L HRNL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHE 217
L G + + EL P GSL L G H T + A+ A G+ YL
Sbjct: 76 LYGVVLTPPMK---MVTELAPLGSLLDRLRKHQG---HFLLGTLSRYAVQVAEGMGYLES 129
Query: 218 DSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT-FGYVAPEYA 276
IHRD A N+LL K+ DFGL + P+ +Y+ F + APE
Sbjct: 130 KR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 186
Query: 277 MTGHLLVKSDVYSYGVVLLELLT-GRKP 303
T SD + +GV L E+ T G++P
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 105/224 (46%), Gaps = 20/224 (8%)
Query: 96 TNNFEPASILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLV----EVEMLSRL 150
++ +E ILG GG V L D VA+K L + D F + E + + L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLAR-DPSFYLRFRREAQNAAAL 69
Query: 151 HHRNLVKLVGYYSSRDSSQHL--LCYELVPNGSLESWLH--GPLGVNCHLDWETRMKIAL 206
+H +V + + + L + E V +L +H GP+ + +++
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM------TPKRAIEVIA 123
Query: 207 DAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQ-APEGRTNYLSTRVM 265
DA + L + H++ +IHRD K +NIL+ KV DFG+A+ A G + + V+
Sbjct: 124 DACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVI 180
Query: 266 GTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
GT Y++PE A + +SDVYS G VL E+LTG P P
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 105/212 (49%), Gaps = 26/212 (12%)
Query: 105 LGEGGFGRVF----KGVLSDG--TAVAIKRLTCGGQQGDK-EFLVEVEMLSRLHHRNLVK 157
LG+G FG V+ KGV+ D T VAIK + ++ EFL E ++ + ++V+
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWL--------HGPLGVNCHLDWETRMKIALDAA 209
L+G S + L+ EL+ G L+S+L + P+ L +++A + A
Sbjct: 80 LLGVVSQGQPT--LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS--KMIQMAGEIA 135
Query: 210 RGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFG 269
G+AYL+ + +HRD A N + +F K+ DFG+ + E T+Y G
Sbjct: 136 DGMAYLNANK---FVHRDLAARNCXVAEDFTVKIGDFGMTRDIYE--TDYYRKGGKGLLP 190
Query: 270 --YVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
+++PE G SDV+S+GVVL E+ T
Sbjct: 191 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 92/208 (44%), Gaps = 18/208 (8%)
Query: 105 LGEGGFGRVFKGVLS----DGTAVAIKRL---TCGGQQGDKEFLVEVEMLSRLHHRNLVK 157
LG+G FG V +G +VA+K L + +F+ EV + L HRNL++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHE 217
L G + + EL P GSL L G H T + A+ A G+ YL
Sbjct: 86 LYGVVLTPPMK---MVTELAPLGSLLDRLRKHQG---HFLLGTLSRYAVQVAEGMGYLES 139
Query: 218 DSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNY-LSTRVMGTFGYVAPEYA 276
IHRD A N+LL K+ DFGL + P+ +Y + F + APE
Sbjct: 140 KR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 196
Query: 277 MTGHLLVKSDVYSYGVVLLELLT-GRKP 303
T SD + +GV L E+ T G++P
Sbjct: 197 KTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 103/212 (48%), Gaps = 16/212 (7%)
Query: 104 ILGEGGFGRVFKGVLS----DGTAVAIKRLTCG-GQQGDKEFLVEVEMLSRLHHRNLVKL 158
++G G FG V G L AVAIK L G ++ ++FL E ++ + H N+V L
Sbjct: 50 VIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHL 109
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHED 218
G + ++ E + NG+L+++L G + ++ A G+ YL +
Sbjct: 110 EGVVTR--GKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLR---GIAAGMRYLADM 164
Query: 219 SQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEG-RTNYLSTRVMGTFGYVAPEYAM 277
+HRD A NIL+ +N KV+DFGL++ + Y +T + APE
Sbjct: 165 G---YVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQ 221
Query: 278 TGHLLVKSDVYSYGVVLLELLT-GRKPV-DMS 307
SDV+SYG+V+ E+++ G +P DMS
Sbjct: 222 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMS 253
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 92/208 (44%), Gaps = 18/208 (8%)
Query: 105 LGEGGFGRVFKGVLS----DGTAVAIKRL---TCGGQQGDKEFLVEVEMLSRLHHRNLVK 157
LG+G FG V +G +VA+K L + +F+ EV + L HRNL++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHE 217
L G + + EL P GSL L G H T + A+ A G+ YL
Sbjct: 80 LYGVVLTPPMK---MVTELAPLGSLLDRLRKHQG---HFLLGTLSRYAVQVAEGMGYLES 133
Query: 218 DSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT-FGYVAPEYA 276
IHRD A N+LL K+ DFGL + P+ +Y+ F + APE
Sbjct: 134 KR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 190
Query: 277 MTGHLLVKSDVYSYGVVLLELLT-GRKP 303
T SD + +GV L E+ T G++P
Sbjct: 191 KTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 121/287 (42%), Gaps = 42/287 (14%)
Query: 104 ILGEGGFGRVFKGVL--SDGTAV--AIKRLTCGGQQGD-KEFLVEVEMLSRLHHRNLVKL 158
++G G FG V+ G L +DG + A+K L G+ +FL E ++ H N++ L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWL----HGPLGVNCHLDWETRMKIALDAARGLAY 214
+G R L+ + +G L +++ H P + + L A+G+ Y
Sbjct: 96 LGI-CLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-------TVKDLIGFGLQVAKGMKY 147
Query: 215 LHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVA 272
L +HRD A N +L+ F KVADFGLA+ + + + ++A
Sbjct: 148 LASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMA 204
Query: 273 PEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRL--E 330
E T KSDV+S+GV+L EL+T P P N +L+ + L E
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQPE 259
Query: 331 ELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMV 377
DP + + C P+A RP+ E+V + +
Sbjct: 260 YCPDP-------------LYEVMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 92/208 (44%), Gaps = 18/208 (8%)
Query: 105 LGEGGFGRVFKGVLS----DGTAVAIKRL---TCGGQQGDKEFLVEVEMLSRLHHRNLVK 157
LG+G FG V +G +VA+K L + +F+ EV + L HRNL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHE 217
L G + + EL P GSL L G H T + A+ A G+ YL
Sbjct: 76 LYGVVLTPPMK---MVTELAPLGSLLDRLRKHQG---HFLLGTLSRYAVQVAEGMGYLES 129
Query: 218 DSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT-FGYVAPEYA 276
IHRD A N+LL K+ DFGL + P+ +Y+ F + APE
Sbjct: 130 KR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 186
Query: 277 MTGHLLVKSDVYSYGVVLLELLT-GRKP 303
T SD + +GV L E+ T G++P
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 128/286 (44%), Gaps = 38/286 (13%)
Query: 105 LGEGGFGRVFKGVLSD------GTAVAIKRLTCGGQQGDK-EFLVEVEMLSRLHHRNLVK 157
LG+G FG V++G D T VA+K + ++ EFL E ++ ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWLHG--PLGVNCH----LDWETRMKIALDAARG 211
L+G S + L+ EL+ +G L+S+L P N + +++A + A G
Sbjct: 85 LLGVVSKGQPT--LVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYV 271
+AYL+ +HRD A N ++ ++F K+ DFG+ + E + + ++
Sbjct: 143 MAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 272 APEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRLEE 331
APE G SD++S+GVVL E+ + + QP L ++ L+
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAE-----QPYQG----------LSNEQVLKF 244
Query: 332 LADPRLGGKYPKEDFI--RVCTIAAACVAPEANQRPTMGEVVQSLK 375
+ D GG + D RV + C N RPT E+V LK
Sbjct: 245 VMD---GGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 122/287 (42%), Gaps = 42/287 (14%)
Query: 104 ILGEGGFGRVFKGVL--SDGTAV--AIKRLTCGGQQGD-KEFLVEVEMLSRLHHRNLVKL 158
++G G FG V+ G L +DG + A+K L G+ +FL E ++ H N++ L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWL----HGPLGVNCHLDWETRMKIALDAARGLAY 214
+G R L+ + +G L +++ H P + + L A+G+ Y
Sbjct: 97 LGI-CLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-------TVKDLIGFGLQVAKGMKY 148
Query: 215 LHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVA 272
L + +HRD A N +L+ F KVADFGLA+ + + + ++A
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 273 PEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRL--E 330
E T KSDV+S+GV+L EL+T P P N +L+ + L E
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQPE 260
Query: 331 ELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMV 377
DP + + C P+A RP+ E+V + +
Sbjct: 261 YCPDP-------------LYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 122/287 (42%), Gaps = 42/287 (14%)
Query: 104 ILGEGGFGRVFKGVL--SDGTAV--AIKRLTCGGQQGD-KEFLVEVEMLSRLHHRNLVKL 158
++G G FG V+ G L +DG + A+K L G+ +FL E ++ H N++ L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWL----HGPLGVNCHLDWETRMKIALDAARGLAY 214
+G R L+ + +G L +++ H P + + L A+G+ Y
Sbjct: 95 LGI-CLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-------TVKDLIGFGLQVAKGMKY 146
Query: 215 LHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVA 272
L + +HRD A N +L+ F KVADFGLA+ + + + ++A
Sbjct: 147 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 203
Query: 273 PEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRL--E 330
E T KSDV+S+GV+L EL+T P P N +L+ + L E
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQPE 258
Query: 331 ELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMV 377
DP + + C P+A RP+ E+V + +
Sbjct: 259 YCPDP-------------LYEVMLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 121/287 (42%), Gaps = 42/287 (14%)
Query: 104 ILGEGGFGRVFKGVL--SDGTAV--AIKRLTCGGQQGD-KEFLVEVEMLSRLHHRNLVKL 158
++G G FG V+ G L +DG + A+K L G+ +FL E ++ H N++ L
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWL----HGPLGVNCHLDWETRMKIALDAARGLAY 214
+G R L+ + +G L +++ H P + + L A+G+ Y
Sbjct: 116 LGI-CLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-------TVKDLIGFGLQVAKGMKY 167
Query: 215 LHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVA 272
L +HRD A N +L+ F KVADFGLA+ + + + ++A
Sbjct: 168 LASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 224
Query: 273 PEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRL--E 330
E T KSDV+S+GV+L EL+T P P N +L+ + L E
Sbjct: 225 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQPE 279
Query: 331 ELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMV 377
DP + + C P+A RP+ E+V + +
Sbjct: 280 YCPDP-------------LYEVMLKCWHPKAEMRPSFSELVSRISAI 313
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 122/287 (42%), Gaps = 42/287 (14%)
Query: 104 ILGEGGFGRVFKGVL--SDGTAV--AIKRLTCGGQQGD-KEFLVEVEMLSRLHHRNLVKL 158
++G G FG V+ G L +DG + A+K L G+ +FL E ++ H N++ L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWL----HGPLGVNCHLDWETRMKIALDAARGLAY 214
+G R L+ + +G L +++ H P + + L A+G+ Y
Sbjct: 97 LGI-CLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-------TVKDLIGFGLQVAKGMKY 148
Query: 215 LHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVA 272
L + +HRD A N +L+ F KVADFGLA+ + + + ++A
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 273 PEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRL--E 330
E T KSDV+S+GV+L EL+T P P N +L+ + L E
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQPE 260
Query: 331 ELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMV 377
DP + + C P+A RP+ E+V + +
Sbjct: 261 YCPDP-------------LYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 109/216 (50%), Gaps = 23/216 (10%)
Query: 104 ILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYY 162
+LG+G +G V+ G LS+ +AIK + + + E+ + L H+N+V+ +G +
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 163 SSRDSSQHLLCYELVPNGSLESWLH---GPLGVNCH-LDWETRMKIALDAARGLAYLHED 218
S + + E VP GSL + L GPL N + + T+ + GL YLH++
Sbjct: 75 SENGFIKIFM--EQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL-----EGLKYLHDN 127
Query: 219 SQPCVIHRDFKASNILLENNFHA--KVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYA 276
++HRD K N+L+ N + K++DFG +K+ N + GT Y+APE
Sbjct: 128 Q---IVHRDIKGDNVLI-NTYSGVLKISDFGTSKRL--AGINPCTETFTGTLQYMAPEII 181
Query: 277 MTG--HLLVKSDVYSYGVVLLELLTGRKPV-DMSQP 309
G +D++S G ++E+ TG+ P ++ +P
Sbjct: 182 DKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEP 217
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 122/287 (42%), Gaps = 42/287 (14%)
Query: 104 ILGEGGFGRVFKGVL--SDGTAV--AIKRLTCGGQQGD-KEFLVEVEMLSRLHHRNLVKL 158
++G G FG V+ G L +DG + A+K L G+ +FL E ++ H N++ L
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 91
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWL----HGPLGVNCHLDWETRMKIALDAARGLAY 214
+G R L+ + +G L +++ H P + + L A+G+ Y
Sbjct: 92 LGI-CLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-------TVKDLIGFGLQVAKGMKY 143
Query: 215 LHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVA 272
L + +HRD A N +L+ F KVADFGLA+ + + + ++A
Sbjct: 144 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 200
Query: 273 PEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRL--E 330
E T KSDV+S+GV+L EL+T P P N +L+ + L E
Sbjct: 201 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQPE 255
Query: 331 ELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMV 377
DP + + C P+A RP+ E+V + +
Sbjct: 256 YCPDP-------------LYEVMLKCWHPKAEMRPSFSELVSRISAI 289
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 122/287 (42%), Gaps = 42/287 (14%)
Query: 104 ILGEGGFGRVFKGVL--SDGTAV--AIKRLTCGGQQGD-KEFLVEVEMLSRLHHRNLVKL 158
++G G FG V+ G L +DG + A+K L G+ +FL E ++ H N++ L
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 88
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWL----HGPLGVNCHLDWETRMKIALDAARGLAY 214
+G R L+ + +G L +++ H P + + L A+G+ Y
Sbjct: 89 LGI-CLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-------TVKDLIGFGLQVAKGMKY 140
Query: 215 LHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQA--PEGRTNYLSTRVMGTFGYVA 272
L +HRD A N +L+ F KVADFGLA+ E + + T ++A
Sbjct: 141 LASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 197
Query: 273 PEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRL--E 330
E T KSDV+S+GV+L EL+T P P N +L+ + L E
Sbjct: 198 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQPE 252
Query: 331 ELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMV 377
DP + + C P+A RP+ E+V + +
Sbjct: 253 YCPDP-------------LYEVMLKCWHPKAEMRPSFSELVSRISAI 286
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 122/287 (42%), Gaps = 42/287 (14%)
Query: 104 ILGEGGFGRVFKGVL--SDGTAV--AIKRLTCGGQQGD-KEFLVEVEMLSRLHHRNLVKL 158
++G G FG V+ G L +DG + A+K L G+ +FL E ++ H N++ L
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWL----HGPLGVNCHLDWETRMKIALDAARGLAY 214
+G R L+ + +G L +++ H P + + L A+G+ Y
Sbjct: 94 LGI-CLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-------TVKDLIGFGLQVAKGMKY 145
Query: 215 LHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVA 272
L + +HRD A N +L+ F KVADFGLA+ + + + ++A
Sbjct: 146 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 202
Query: 273 PEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRL--E 330
E T KSDV+S+GV+L EL+T P P N +L+ + L E
Sbjct: 203 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQPE 257
Query: 331 ELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMV 377
DP + + C P+A RP+ E+V + +
Sbjct: 258 YCPDP-------------LYEVMLKCWHPKAEMRPSFSELVSRISAI 291
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 121/287 (42%), Gaps = 42/287 (14%)
Query: 104 ILGEGGFGRVFKGVL--SDGTAV--AIKRLTCGGQQGD-KEFLVEVEMLSRLHHRNLVKL 158
++G G FG V+ G L +DG + A+K L G+ +FL E ++ H N++ L
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWL----HGPLGVNCHLDWETRMKIALDAARGLAY 214
+G R L+ + +G L +++ H P + + L A+G+ Y
Sbjct: 115 LGI-CLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-------TVKDLIGFGLQVAKGMKY 166
Query: 215 LHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVA 272
L +HRD A N +L+ F KVADFGLA+ + + + ++A
Sbjct: 167 LASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 223
Query: 273 PEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRL--E 330
E T KSDV+S+GV+L EL+T P P N +L+ + L E
Sbjct: 224 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQPE 278
Query: 331 ELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMV 377
DP + + C P+A RP+ E+V + +
Sbjct: 279 YCPDP-------------LYEVMLKCWHPKAEMRPSFSELVSRISAI 312
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 123/287 (42%), Gaps = 42/287 (14%)
Query: 104 ILGEGGFGRVFKGVL--SDGTAV--AIKRLTCGGQQGD-KEFLVEVEMLSRLHHRNLVKL 158
++G G FG V+ G L +DG + A+K L G+ +FL E ++ H N++ L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWL----HGPLGVNCHLDWETRMKIALDAARGLAY 214
+G R L+ + +G L +++ H P + + L A+G+ +
Sbjct: 98 LGI-CLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-------TVKDLIGFGLQVAKGMKF 149
Query: 215 LHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVA 272
L + +HRD A N +L+ F KVADFGLA+ + + + + ++A
Sbjct: 150 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMA 206
Query: 273 PEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRL--E 330
E T KSDV+S+GV+L EL+T P P N +L+ + L E
Sbjct: 207 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQPE 261
Query: 331 ELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMV 377
DP + + C P+A RP+ E+V + +
Sbjct: 262 YCPDP-------------LYEVMLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 122/287 (42%), Gaps = 42/287 (14%)
Query: 104 ILGEGGFGRVFKGVL--SDGTAV--AIKRLTCGGQQGD-KEFLVEVEMLSRLHHRNLVKL 158
++G G FG V+ G L +DG + A+K L G+ +FL E ++ H N++ L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWL----HGPLGVNCHLDWETRMKIALDAARGLAY 214
+G R L+ + +G L +++ H P + + L A+G+ Y
Sbjct: 96 LGI-CLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-------TVKDLIGFGLQVAKGMKY 147
Query: 215 LHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVA 272
L + +HRD A N +L+ F KVADFGLA+ + + + ++A
Sbjct: 148 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 204
Query: 273 PEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRL--E 330
E T KSDV+S+GV+L EL+T P P N +L+ + L E
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQPE 259
Query: 331 ELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMV 377
DP + + C P+A RP+ E+V + +
Sbjct: 260 YCPDP-------------LYEVMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 117/237 (49%), Gaps = 36/237 (15%)
Query: 86 FLAYEELKEATNNFEPASI------LGEGGFGRVFKGVLSDGTAVAI-KRLTCGGQQGDK 138
F + ++ + T + P LG+G FG+V+K + + +A K + ++ +
Sbjct: 20 FQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELE 79
Query: 139 EFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESW---LHGPLGVNCH 195
+++VE+++L+ H N+VKL+ + ++ L+ E G++++ L PL
Sbjct: 80 DYMVEIDILASCDHPNIVKLLDAFYYENNLWILI--EFCAGGAVDAVMLELERPLT---- 133
Query: 196 LDWETRMKIA----LDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQ 251
E+++++ LDA L YLH++ +IHRD KA NIL + K+ADFG++
Sbjct: 134 ---ESQIQVVCKQTLDA---LNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVS-- 182
Query: 252 APEGRTNYLSTRVMGTFGYVAPEYAMTGH-----LLVKSDVYSYGVVLLELLTGRKP 303
A RT +GT ++APE M K+DV+S G+ L+E+ P
Sbjct: 183 AKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 123/287 (42%), Gaps = 42/287 (14%)
Query: 104 ILGEGGFGRVFKGVL--SDGTAV--AIKRLTCGGQQGD-KEFLVEVEMLSRLHHRNLVKL 158
++G G FG V+ G L +DG + A+K L G+ +FL E ++ H N++ L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWL----HGPLGVNCHLDWETRMKIALDAARGLAY 214
+G R L+ + +G L +++ H P + + L A+G+ +
Sbjct: 98 LGI-CLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-------TVKDLIGFGLQVAKGMKF 149
Query: 215 LHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVA 272
L + +HRD A N +L+ F KVADFGLA+ + + + + ++A
Sbjct: 150 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 206
Query: 273 PEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRL--E 330
E T KSDV+S+GV+L EL+T P P N +L+ + L E
Sbjct: 207 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQPE 261
Query: 331 ELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMV 377
DP + + C P+A RP+ E+V + +
Sbjct: 262 YCPDP-------------LYEVMLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 123/287 (42%), Gaps = 42/287 (14%)
Query: 104 ILGEGGFGRVFKGVL--SDGTAV--AIKRLTCGGQQGD-KEFLVEVEMLSRLHHRNLVKL 158
++G G FG V+ G L +DG + A+K L G+ +FL E ++ H N++ L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWL----HGPLGVNCHLDWETRMKIALDAARGLAY 214
+G R L+ + +G L +++ H P + + L A+G+ +
Sbjct: 97 LGI-CLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-------TVKDLIGFGLQVAKGMKF 148
Query: 215 LHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVA 272
L + +HRD A N +L+ F KVADFGLA+ + + + + ++A
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 273 PEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRL--E 330
E T KSDV+S+GV+L EL+T P P N +L+ + L E
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQPE 260
Query: 331 ELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMV 377
DP + + C P+A RP+ E+V + +
Sbjct: 261 YCPDP-------------LYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 123/287 (42%), Gaps = 42/287 (14%)
Query: 104 ILGEGGFGRVFKGVL--SDGTAV--AIKRLTCGGQQGD-KEFLVEVEMLSRLHHRNLVKL 158
++G G FG V+ G L +DG + A+K L G+ +FL E ++ H N++ L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWL----HGPLGVNCHLDWETRMKIALDAARGLAY 214
+G R L+ + +G L +++ H P + + L A+G+ +
Sbjct: 95 LGI-CLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-------TVKDLIGFGLQVAKGMKF 146
Query: 215 LHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVA 272
L + +HRD A N +L+ F KVADFGLA+ + + + + ++A
Sbjct: 147 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 203
Query: 273 PEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRL--E 330
E T KSDV+S+GV+L EL+T P P N +L+ + L E
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQPE 258
Query: 331 ELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMV 377
DP + + C P+A RP+ E+V + +
Sbjct: 259 YCPDP-------------LYEVMLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 123/287 (42%), Gaps = 42/287 (14%)
Query: 104 ILGEGGFGRVFKGVL--SDGTAV--AIKRLTCGGQQGD-KEFLVEVEMLSRLHHRNLVKL 158
++G G FG V+ G L +DG + A+K L G+ +FL E ++ H N++ L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWL----HGPLGVNCHLDWETRMKIALDAARGLAY 214
+G R L+ + +G L +++ H P + + L A+G+ +
Sbjct: 97 LGI-CLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-------TVKDLIGFGLQVAKGMKF 148
Query: 215 LHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVA 272
L + +HRD A N +L+ F KVADFGLA+ + + + + ++A
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 273 PEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRL--E 330
E T KSDV+S+GV+L EL+T P P N +L+ + L E
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQPE 260
Query: 331 ELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMV 377
DP + + C P+A RP+ E+V + +
Sbjct: 261 YCPDP-------------LYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 123/287 (42%), Gaps = 42/287 (14%)
Query: 104 ILGEGGFGRVFKGVL--SDGTAV--AIKRLTCGGQQGD-KEFLVEVEMLSRLHHRNLVKL 158
++G G FG V+ G L +DG + A+K L G+ +FL E ++ H N++ L
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWL----HGPLGVNCHLDWETRMKIALDAARGLAY 214
+G R L+ + +G L +++ H P + + L A+G+ +
Sbjct: 102 LGI-CLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-------TVKDLIGFGLQVAKGMKF 153
Query: 215 LHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVA 272
L + +HRD A N +L+ F KVADFGLA+ + + + + ++A
Sbjct: 154 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 210
Query: 273 PEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRL--E 330
E T KSDV+S+GV+L EL+T P P N +L+ + L E
Sbjct: 211 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQPE 265
Query: 331 ELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMV 377
DP + + C P+A RP+ E+V + +
Sbjct: 266 YCPDP-------------LYEVMLKCWHPKAEMRPSFSELVSRISAI 299
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 105/224 (46%), Gaps = 20/224 (8%)
Query: 96 TNNFEPASILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLV----EVEMLSRL 150
++ +E ILG GG V L D VA+K L + D F + E + + L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLAR-DPSFYLRFRREAQNAAAL 69
Query: 151 HHRNLVKLVGYYSSRDSSQHL--LCYELVPNGSLESWLH--GPLGVNCHLDWETRMKIAL 206
+H +V + + + L + E V +L +H GP+ + +++
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMT------PKRAIEVIA 123
Query: 207 DAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQ-APEGRTNYLSTRVM 265
DA + L + H++ +IHRD K +NI++ KV DFG+A+ A G + + V+
Sbjct: 124 DACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 266 GTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
GT Y++PE A + +SDVYS G VL E+LTG P P
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 122/287 (42%), Gaps = 42/287 (14%)
Query: 104 ILGEGGFGRVFKGVL--SDGTAV--AIKRLTCGGQQGD-KEFLVEVEMLSRLHHRNLVKL 158
++G G FG V+ G L +DG + A+K L G+ +FL E ++ H N++ L
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWL----HGPLGVNCHLDWETRMKIALDAARGLAY 214
+G R L+ + +G L +++ H P + + L A+G+ +
Sbjct: 156 LGI-CLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-------TVKDLIGFGLQVAKGMKF 207
Query: 215 LHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVA 272
L +HRD A N +L+ F KVADFGLA+ + + + + ++A
Sbjct: 208 LASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 264
Query: 273 PEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRL--E 330
E T KSDV+S+GV+L EL+T P P N +L+ + L E
Sbjct: 265 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQPE 319
Query: 331 ELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMV 377
DP + + C P+A RP+ E+V + +
Sbjct: 320 YCPDP-------------LYEVMLKCWHPKAEMRPSFSELVSRISAI 353
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 105/224 (46%), Gaps = 20/224 (8%)
Query: 96 TNNFEPASILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLV----EVEMLSRL 150
++ +E ILG GG V L D VA+K L + D F + E + + L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLAR-DPSFYLRFRREAQNAAAL 69
Query: 151 HHRNLVKLVGYYSSRDSSQHL--LCYELVPNGSLESWLH--GPLGVNCHLDWETRMKIAL 206
+H +V + + + L + E V +L +H GP+ + +++
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM------TPKRAIEVIA 123
Query: 207 DAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQ-APEGRTNYLSTRVM 265
DA + L + H++ +IHRD K +NI++ KV DFG+A+ A G + + V+
Sbjct: 124 DACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 266 GTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
GT Y++PE A + +SDVYS G VL E+LTG P P
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 111/240 (46%), Gaps = 38/240 (15%)
Query: 97 NNFEPASILGEGGFGRVFKGVLS-DGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNL 155
++FE ++LG+G FG+V K + D AIK++ ++ L EV +L+ L+H+ +
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLNHQYV 64
Query: 156 VKLVGYYSSR-----------DSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKI 204
V+ + R S + E NG+L +H N + + ++
Sbjct: 65 VRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSE---NLNQQRDEYWRL 121
Query: 205 ALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAK-------------Q 251
L+Y+H +IHRD K NI ++ + + K+ DFGLAK Q
Sbjct: 122 FRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 252 APEGRTNYLSTRVMGTFGYVAPEYAM-TGHLLVKSDVYSYGVVLLELL----TGRKPVDM 306
G ++ L T +GT YVA E TGH K D+YS G++ E++ TG + V++
Sbjct: 179 NLPGSSDNL-TSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNI 237
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 126/285 (44%), Gaps = 37/285 (12%)
Query: 104 ILGEGGFGRVFKGVLSD--GTAVAIKRLTCGGQ---QGDKEFLVEVEMLSRLHHRNLVKL 158
ILGEG FG V++GV ++ G + + TC ++F+ E ++ L H ++VKL
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHED 218
+G + + EL P G L +L L T + +L + +AYL +
Sbjct: 75 IGIIEEEPT---WIIMELYPYGELGHYLERNKN---SLKVLTLVLYSLQICKAMAYL--E 126
Query: 219 SQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMT 278
S CV HRD NIL+ + K+ DFGL++ E Y ++ +++PE
Sbjct: 127 SINCV-HRDIAVRNILVASPECVKLGDFGLSRYI-EDEDYYKASVTRLPIKWMSPESINF 184
Query: 279 GHLLVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARPILRDKDRLEELADPRL 337
SDV+ + V + E+L+ G++P W L +KD + L
Sbjct: 185 RRFTTASDVWMFAVCMWEILSFGKQP------------FFW----LENKDVIGVLEK--- 225
Query: 338 GGKYPKEDFI--RVCTIAAACVAPEANQRPTMGEVVQSLKMVQRV 380
G + PK D + T+ C + + RP E+V SL V ++
Sbjct: 226 GDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 270
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 103/228 (45%), Gaps = 21/228 (9%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSDGTAV-AIKRLT---CGGQQGDKEFLVEVEMLSRLHH 152
++FE +G+G FG+V +D + A+K + C + + E++++ L H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 153 RNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGL 212
LV L +YS +D + +L+ G L L N H ET + L
Sbjct: 75 PFLVNL--WYSFQDEEDMFMVVDLLLGGDLRYHLQQ----NVHFKEETVKLFICELVMAL 128
Query: 213 AYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVA 272
YL +IHRD K NILL+ + H + DF +A P R ++T + GT Y+A
Sbjct: 129 DYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLP--RETQITT-MAGTKPYMA 182
Query: 273 PEYAMT----GHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLV 316
PE + G+ D +S GV ELL GR+P + + + +V
Sbjct: 183 PEMFSSRKGAGYSFA-VDWWSLGVTAYELLRGRRPYHIRSSTSSKEIV 229
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 138/329 (41%), Gaps = 49/329 (14%)
Query: 75 GGSLPHPTSTRFLAYEELKEATNNFEPASILGEGGFGRVFK------GVLSDGTAVAIKR 128
G S T+ E+ + NN + LG G FG+V + G VA+K
Sbjct: 9 GNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKM 68
Query: 129 LTCGGQQGDKEFLV-EVEMLSRL-HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWL 186
L +KE L+ E++++S L H N+V L+G + L+ E G L ++L
Sbjct: 69 LKSTAHADEKEALMSELKIMSHLGQHENIVNLLG--ACTHGGPVLVITEYCCYGDLLNFL 126
Query: 187 ---------------HGPLGVNCH----LDWETRMKIALDAARGLAYLHEDSQPCVIHRD 227
P G++ L+ + + A+G+A+L S+ C IHRD
Sbjct: 127 RRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLA--SKNC-IHRD 183
Query: 228 FKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGHLLVKSDV 287
A N+LL N AK+ DFGLA+ + ++APE V+SDV
Sbjct: 184 VAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDV 243
Query: 288 YSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARPILRDKDRLEELADPRLGGKYPKEDF 346
+SYG++L E+ + G P P N + +++D ++A P K
Sbjct: 244 WSYGILLWEIFSLGLNPY----PGILVNSKFYK--LVKDG---YQMAQPAFAPK------ 288
Query: 347 IRVCTIAAACVAPEANQRPTMGEVVQSLK 375
+ +I AC A E RPT ++ L+
Sbjct: 289 -NIYSIMQACWALEPTHRPTFQQICSFLQ 316
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 126/285 (44%), Gaps = 37/285 (12%)
Query: 104 ILGEGGFGRVFKGVLSD--GTAVAIKRLTCGGQ---QGDKEFLVEVEMLSRLHHRNLVKL 158
ILGEG FG V++GV ++ G + + TC ++F+ E ++ L H ++VKL
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHED 218
+G + + EL P G L +L L T + +L + +AYL +
Sbjct: 79 IGIIEEEPT---WIIMELYPYGELGHYLERNKN---SLKVLTLVLYSLQICKAMAYL--E 130
Query: 219 SQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMT 278
S CV HRD NIL+ + K+ DFGL++ E Y ++ +++PE
Sbjct: 131 SINCV-HRDIAVRNILVASPECVKLGDFGLSRYI-EDEDYYKASVTRLPIKWMSPESINF 188
Query: 279 GHLLVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARPILRDKDRLEELADPRL 337
SDV+ + V + E+L+ G++P W L +KD + L
Sbjct: 189 RRFTTASDVWMFAVCMWEILSFGKQP------------FFW----LENKDVIGVLEK--- 229
Query: 338 GGKYPKEDFI--RVCTIAAACVAPEANQRPTMGEVVQSLKMVQRV 380
G + PK D + T+ C + + RP E+V SL V ++
Sbjct: 230 GDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 274
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 94/213 (44%), Gaps = 17/213 (7%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLTCGGQ---QG-DKEFLVEVEMLSRLHH 152
++FE LG+G FG V+ + ++ Q +G + + E+E+ + LHH
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 153 RNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGL 212
N+++L Y+ D + L E P G L + L +C D + I + A L
Sbjct: 83 PNILRLYNYFY--DRRRIYLILEYAPRGEL----YKELQKSCTFDEQRTATIMEELADAL 136
Query: 213 AYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVA 272
Y H VIHRD K N+LL K+ADFG + AP R + GT Y+
Sbjct: 137 MYCHGKK---VIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMC----GTLDYLP 189
Query: 273 PEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 305
PE K D++ GV+ ELL G P +
Sbjct: 190 PEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFE 222
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 126/285 (44%), Gaps = 37/285 (12%)
Query: 104 ILGEGGFGRVFKGVLSD--GTAVAIKRLTCGGQ---QGDKEFLVEVEMLSRLHHRNLVKL 158
ILGEG FG V++GV ++ G + + TC ++F+ E ++ L H ++VKL
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHED 218
+G + + EL P G L +L L T + +L + +AYL +
Sbjct: 91 IGIIEEEPT---WIIMELYPYGELGHYLERNKN---SLKVLTLVLYSLQICKAMAYL--E 142
Query: 219 SQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMT 278
S CV HRD NIL+ + K+ DFGL++ E Y ++ +++PE
Sbjct: 143 SINCV-HRDIAVRNILVASPECVKLGDFGLSRYI-EDEDYYKASVTRLPIKWMSPESINF 200
Query: 279 GHLLVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARPILRDKDRLEELADPRL 337
SDV+ + V + E+L+ G++P W L +KD + L
Sbjct: 201 RRFTTASDVWMFAVCMWEILSFGKQP------------FFW----LENKDVIGVLEK--- 241
Query: 338 GGKYPKEDFI--RVCTIAAACVAPEANQRPTMGEVVQSLKMVQRV 380
G + PK D + T+ C + + RP E+V SL V ++
Sbjct: 242 GDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 286
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 95/226 (42%), Gaps = 19/226 (8%)
Query: 93 KEATNNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLTCGGQ---QG-DKEFLVEVEMLS 148
K ++F+ LG+G FG V+ + ++ Q +G + + E+E+ S
Sbjct: 10 KFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 69
Query: 149 RLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDA 208
L H N++++ Y+ D + L E P G L + L + D + +
Sbjct: 70 HLRHPNILRMYNYFH--DRKRIYLMLEFAPRGEL----YKELQKHGRFDEQRSATFMEEL 123
Query: 209 ARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF 268
A L Y HE VIHRD K N+L+ K+ADFG + AP R + GT
Sbjct: 124 ADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC----GTL 176
Query: 269 GYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQEN 314
Y+ PE K D++ GV+ E L G P D PS E
Sbjct: 177 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD--SPSHTET 220
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 99/222 (44%), Gaps = 32/222 (14%)
Query: 93 KEATNNFEPASILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVE------ 145
K + +F+ LG G FGRV +G A+K L KE +V ++
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLK-------KEIVVRLKQVEHTN 54
Query: 146 ----MLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETR 201
MLS + H ++++ G + +D+ Q + + + G L S L +
Sbjct: 55 DERLMLSIVTHPFIIRMWG--TFQDAQQIFMIMDYIEGGELFSLLRK----SQRFPNPVA 108
Query: 202 MKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLS 261
A + L YLH +I+RD K NILL+ N H K+ DFG AK P+ ++
Sbjct: 109 KFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPD-----VT 160
Query: 262 TRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
+ GT Y+APE T D +S+G+++ E+L G P
Sbjct: 161 YXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTP 202
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 97/207 (46%), Gaps = 20/207 (9%)
Query: 105 LGEGGFGRVFKGVL----SDGTAVAIKRLTCGGQQGD---KEFLVEVEMLSRLHHRNLVK 157
+GEG FG V +G+ + AVAIK TC D ++FL E + + H ++VK
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIK--TCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHE 217
L+G + + EL G L S+L LD + + A + LAYL
Sbjct: 76 LIGVITENPV---WIIMELCTLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYLES 129
Query: 218 DSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAM 277
+HRD A N+L+ +N K+ DFGL++ E T Y +++ ++APE
Sbjct: 130 KR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESIN 185
Query: 278 TGHLLVKSDVYSYGVVLLELLT-GRKP 303
SDV+ +GV + E+L G KP
Sbjct: 186 FRRFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 101/217 (46%), Gaps = 27/217 (12%)
Query: 105 LGEGGFGRVF--------KGVLSDGTAVAIKRLTCGGQQGDKEFLV-EVEMLSRL-HHRN 154
LGEG FG+V K + VA+K L + D LV E+EM+ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 155 LVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHG--PLGVNCHLD----------WETRM 202
++ L+G ++D +++ E G+L +L P G+ D ++ +
Sbjct: 103 IINLLGA-CTQDGPLYVIV-EYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLV 160
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
ARG+ YL SQ C IHRD A N+L+ N K+ADFGLA+ +T
Sbjct: 161 SCTYQLARGMEYLA--SQKC-IHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 263 RVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
++APE +SDV+S+GV++ E+ T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 100/219 (45%), Gaps = 25/219 (11%)
Query: 105 LGEGGFGRVFKGVL------SDGTAVAIKRLTCGGQQG-DKEFLVEVEMLSRLHHRNLVK 157
LGE FG+V+KG L AVAIK L + +EF E + +RL H N+V
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWL-----HGPLG-------VNCHLDWETRMKIA 205
L+G + + Y +G L +L H +G V L+ + +
Sbjct: 94 LLGVVTKDQPLSMIFSY--CSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 151
Query: 206 LDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVM 265
A G+ YL S V+H+D N+L+ + + K++D GL ++ L +
Sbjct: 152 AQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSL 208
Query: 266 GTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 303
++APE M G + SD++SYGVVL E+ + G +P
Sbjct: 209 LPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 247
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 92/217 (42%), Gaps = 17/217 (7%)
Query: 93 KEATNNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLTCGGQ---QG-DKEFLVEVEMLS 148
K ++F+ LG+G FG V+ + ++ Q +G + + E+E+ S
Sbjct: 10 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 69
Query: 149 RLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDA 208
L H N++++ Y+ D + L E P G L + L + D + +
Sbjct: 70 HLRHPNILRMYNYFH--DRKRIYLMLEFAPRGEL----YKELQKHGRFDEQRSATFMEEL 123
Query: 209 ARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF 268
A L Y HE VIHRD K N+L+ K+ADFG + AP R + GT
Sbjct: 124 ADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC----GTL 176
Query: 269 GYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 305
Y+ PE K D++ GV+ E L G P D
Sbjct: 177 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 102/219 (46%), Gaps = 31/219 (14%)
Query: 105 LGEGGFGRVF--------KGVLSDGTAVAIKRLTCGGQQGDKEFLV-EVEMLSRL-HHRN 154
LGEG FG+V K + VA+K L + D LV E+EM+ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 155 LVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHG--PLGVNCHLD----------WETRM 202
++ L+G ++D +++ E G+L +L P G+ D ++ +
Sbjct: 103 IINLLGA-CTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
ARG+ YL SQ C IHRD A N+L+ N K+ADFGLA+ +Y
Sbjct: 161 SCTYQLARGMEYLA--SQKC-IHRDLAARNVLVTENNVMKIADFGLARDI--NNIDYYKN 215
Query: 263 RVMGTF--GYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
G ++APE +SDV+S+GV++ E+ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 92/217 (42%), Gaps = 17/217 (7%)
Query: 93 KEATNNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLTCGGQ---QG-DKEFLVEVEMLS 148
K ++F+ LG+G FG V+ + ++ Q +G + + E+E+ S
Sbjct: 11 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 70
Query: 149 RLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDA 208
L H N++++ Y+ D + L E P G L + L + D + +
Sbjct: 71 HLRHPNILRMYNYFH--DRKRIYLMLEFAPRGEL----YKELQKHGRFDEQRSATFMEEL 124
Query: 209 ARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF 268
A L Y HE VIHRD K N+L+ K+ADFG + AP R + GT
Sbjct: 125 ADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC----GTL 177
Query: 269 GYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 305
Y+ PE K D++ GV+ E L G P D
Sbjct: 178 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 104/228 (45%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V + G +A+K+L+ Q
Sbjct: 35 PTFYRQELNKTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHA 94
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 95 KRTYRELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 154
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGLA+ +
Sbjct: 155 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 206
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
T Y++TR Y APE + H + D++S G ++ ELLTGR
Sbjct: 207 EMTGYVATR-----WYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 97/209 (46%), Gaps = 18/209 (8%)
Query: 104 ILGEGGFGRVFKGVLSDG----TAVAIKRLT-CGGQQGDKEFLVEVEMLSRLHHRNLVKL 158
++G+G FG V+ G D AIK L+ Q + FL E ++ L+H N++ L
Sbjct: 28 VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLAL 87
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHED 218
+G + H+L + +G L ++ P D + L ARG+ YL E
Sbjct: 88 IGIMLPPEGLPHVLLPYMC-HGDLLQFIRSPQRNPTVKDL---ISFGLQVARGMEYLAEQ 143
Query: 219 SQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTR----VMGTFGYVAPE 274
+HRD A N +L+ +F KVADFGLA+ + Y S + + A E
Sbjct: 144 K---FVHRDLAARNCMLDESFTVKVADFGLARDILD--REYYSVQQHRHARLPVKWTALE 198
Query: 275 YAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
T KSDV+S+GV+L ELLT P
Sbjct: 199 SLQTYRFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 101/217 (46%), Gaps = 27/217 (12%)
Query: 105 LGEGGFGRVF--------KGVLSDGTAVAIKRLTCGGQQGDKEFLV-EVEMLSRL-HHRN 154
LGEG FG+V K + VA+K L + D LV E+EM+ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 155 LVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHG--PLGVNCHLD----------WETRM 202
++ L+G ++D +++ E G+L +L P G+ D ++ +
Sbjct: 103 IINLLGA-CTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
ARG+ YL SQ C IHRD A N+L+ N K+ADFGLA+ +T
Sbjct: 161 SCTYQLARGMEYLA--SQKC-IHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 263 RVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
++APE +SDV+S+GV++ E+ T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 97/207 (46%), Gaps = 20/207 (9%)
Query: 105 LGEGGFGRVFKGVL----SDGTAVAIKRLTCGGQQGD---KEFLVEVEMLSRLHHRNLVK 157
+GEG FG V +G+ + AVAIK TC D ++FL E + + H ++VK
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIK--TCKNCTSDSVREKFLQEALTMRQFDHPHIVK 77
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHE 217
L+G + + EL G L S+L LD + + A + LAYL
Sbjct: 78 LIGVITENPV---WIIMELCTLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYLES 131
Query: 218 DSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAM 277
+HRD A N+L+ +N K+ DFGL++ E T Y +++ ++APE
Sbjct: 132 KR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESIN 187
Query: 278 TGHLLVKSDVYSYGVVLLELLT-GRKP 303
SDV+ +GV + E+L G KP
Sbjct: 188 FRRFTSASDVWMFGVCMWEILMHGVKP 214
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 97/207 (46%), Gaps = 20/207 (9%)
Query: 105 LGEGGFGRVFKGVL----SDGTAVAIKRLTCGGQQGD---KEFLVEVEMLSRLHHRNLVK 157
+GEG FG V +G+ + AVAIK TC D ++FL E + + H ++VK
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIK--TCKNCTSDSVREKFLQEALTMRQFDHPHIVK 72
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHE 217
L+G + + EL G L S+L LD + + A + LAYL
Sbjct: 73 LIGVITENPV---WIIMELCTLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYLES 126
Query: 218 DSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAM 277
+HRD A N+L+ +N K+ DFGL++ E T Y +++ ++APE
Sbjct: 127 KR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESIN 182
Query: 278 TGHLLVKSDVYSYGVVLLELLT-GRKP 303
SDV+ +GV + E+L G KP
Sbjct: 183 FRRFTSASDVWMFGVCMWEILMHGVKP 209
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 100/232 (43%), Gaps = 25/232 (10%)
Query: 93 KEATNNFEPASILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLV-----EVEM 146
K+ +F+ ILGEG F V L+ AIK L + KE V E ++
Sbjct: 6 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILE--KRHIIKENKVPYVTRERDV 63
Query: 147 LSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH--GPLGVNCHLDWETRMKI 204
+SRL H VKL Y++ +D + NG L ++ G C TR
Sbjct: 64 MSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYT 116
Query: 205 ALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRV 264
A + L YLH +IHRD K NILL + H ++ DFG AK +
Sbjct: 117 A-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 172
Query: 265 MGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLV 316
+GT YV+PE SD+++ G ++ +L+ G P +G E L+
Sbjct: 173 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLI 220
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 127/287 (44%), Gaps = 38/287 (13%)
Query: 97 NNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCG-GQQGDKEFLVEVEMLSRLHHRN 154
++ EP LG G +G V K + G +A+KR+ Q K L+++++ R
Sbjct: 51 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCP 110
Query: 155 LVKLVGYYSSRDSSQHL-LCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLA 213
V +Y + + +C EL+ + SL+ + + + + KIA+ + L
Sbjct: 111 FT--VTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALE 167
Query: 214 YLHEDSQPCVIHRDFKASNILLENNFHAKVADFGL--------AKQAPEGRTNYLSTRVM 265
+LH S+ VIHRD K SN+L+ K+ DFG+ AK G Y++
Sbjct: 168 HLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPE-- 223
Query: 266 GTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRD 325
+ PE G+ VKSD++S G+ ++EL R P D +W P +
Sbjct: 224 ----RINPELNQKGY-SVKSDIWSLGITMIELAILRFPYD-----------SWGTPFQQL 267
Query: 326 KDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQ 372
K +EE P+L +F+ + C+ + +RPT E++Q
Sbjct: 268 KQVVEE-PSPQLPADKFSAEFV---DFTSQCLKKNSKERPTYPELMQ 310
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 100/232 (43%), Gaps = 25/232 (10%)
Query: 93 KEATNNFEPASILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLV-----EVEM 146
K+ +F+ ILGEG F V L+ AIK L + KE V E ++
Sbjct: 5 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILE--KRHIIKENKVPYVTRERDV 62
Query: 147 LSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH--GPLGVNCHLDWETRMKI 204
+SRL H VKL Y++ +D + NG L ++ G C TR
Sbjct: 63 MSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYT 115
Query: 205 ALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRV 264
A + L YLH +IHRD K NILL + H ++ DFG AK +
Sbjct: 116 A-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 171
Query: 265 MGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLV 316
+GT YV+PE SD+++ G ++ +L+ G P +G E L+
Sbjct: 172 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLI 219
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 18/206 (8%)
Query: 105 LGEGGFGRVFKGVLSD------GTAVAIKRLTCGGQQGDK-EFLVEVEMLSRLHHRNLVK 157
LG+G FG V++G D T VA+K + ++ EFL E ++ ++V+
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWLHG--PLGVNCH----LDWETRMKIALDAARG 211
L+G S + L+ EL+ +G L+S+L P N + +++A + A G
Sbjct: 82 LLGVVSKGQPT--LVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 139
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYV 271
+AYL+ +HRD A N ++ ++F K+ DFG+ + E + + ++
Sbjct: 140 MAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 196
Query: 272 APEYAMTGHLLVKSDVYSYGVVLLEL 297
APE G SD++S+GVVL E+
Sbjct: 197 APESLKDGVFTTSSDMWSFGVVLWEI 222
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 101/212 (47%), Gaps = 16/212 (7%)
Query: 104 ILGEGGFGRVFKGVLS----DGTAVAIKRLTCG-GQQGDKEFLVEVEMLSRLHHRNLVKL 158
++G G FG V G L VAIK L G + ++FL E ++ + H N++ L
Sbjct: 36 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 95
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHED 218
G + ++ E + NGSL+++L G + ++ G+ YL +
Sbjct: 96 EGVVTK--CKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR---GIGSGMKYLSDM 150
Query: 219 SQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT-FGYVAPEYAM 277
S +HRD A NIL+ +N KV+DFG+++ + +TR + APE
Sbjct: 151 S---AVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 207
Query: 278 TGHLLVKSDVYSYGVVLLELLT-GRKPV-DMS 307
SDV+SYG+V+ E+++ G +P DMS
Sbjct: 208 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMS 239
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 106/219 (48%), Gaps = 19/219 (8%)
Query: 87 LAYEELKEATNNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLTCGGQ-QGDKEFLV-EV 144
L ++ L E E +GEG +G V+K S G VA+KR+ + +G + E+
Sbjct: 14 LYFQGLMEKYQKLEK---VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREI 70
Query: 145 EMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKI 204
+L LHH N+V L+ S C LV +E L L N ++++KI
Sbjct: 71 SLLKELHHPNIVSLIDVIHSER------CLTLVFE-FMEKDLKKVLDENKTGLQDSQIKI 123
Query: 205 AL-DAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTR 263
L RG+A+ H+ ++HRD K N+L+ ++ K+ADFGLA+ +Y T
Sbjct: 124 YLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--TH 178
Query: 264 VMGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGR 301
+ T Y AP+ M S D++S G + E++TG+
Sbjct: 179 EVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 97/207 (46%), Gaps = 20/207 (9%)
Query: 105 LGEGGFGRVFKGVL----SDGTAVAIKRLTCGGQQGD---KEFLVEVEMLSRLHHRNLVK 157
+GEG FG V +G+ + AVAIK TC D ++FL E + + H ++VK
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIK--TCKNCTSDSVREKFLQEALTMRQFDHPHIVK 455
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHE 217
L+G + + EL G L S+L LD + + A + LAYL
Sbjct: 456 LIGVITENPV---WIIMELCTLGELRSFLQVR---KFSLDLASLILYAYQLSTALAYLES 509
Query: 218 DSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAM 277
+HRD A N+L+ +N K+ DFGL++ E T Y +++ ++APE
Sbjct: 510 KR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESIN 565
Query: 278 TGHLLVKSDVYSYGVVLLELLT-GRKP 303
SDV+ +GV + E+L G KP
Sbjct: 566 FRRFTSASDVWMFGVCMWEILMHGVKP 592
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 97/207 (46%), Gaps = 20/207 (9%)
Query: 105 LGEGGFGRVFKGVL----SDGTAVAIKRLTCGGQQGD---KEFLVEVEMLSRLHHRNLVK 157
+GEG FG V +G+ + AVAIK TC D ++FL E + + H ++VK
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIK--TCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHE 217
L+G + + EL G L S+L LD + + A + LAYL
Sbjct: 76 LIGVITENPV---WIIMELCTLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYLES 129
Query: 218 DSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAM 277
+HRD A N+L+ +N K+ DFGL++ E T Y +++ ++APE
Sbjct: 130 KR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESIN 185
Query: 278 TGHLLVKSDVYSYGVVLLELLT-GRKP 303
SDV+ +GV + E+L G KP
Sbjct: 186 FRRFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 106/219 (48%), Gaps = 19/219 (8%)
Query: 87 LAYEELKEATNNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLTCGGQ-QGDKEFLV-EV 144
L ++ L E E +GEG +G V+K S G VA+KR+ + +G + E+
Sbjct: 14 LYFQGLMEKYQKLEK---VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREI 70
Query: 145 EMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKI 204
+L LHH N+V L+ S C LV +E L L N ++++KI
Sbjct: 71 SLLKELHHPNIVSLIDVIHSER------CLTLVFE-FMEKDLKKVLDENKTGLQDSQIKI 123
Query: 205 AL-DAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTR 263
L RG+A+ H+ ++HRD K N+L+ ++ K+ADFGLA+ +Y T
Sbjct: 124 YLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--TH 178
Query: 264 VMGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGR 301
+ T Y AP+ M S D++S G + E++TG+
Sbjct: 179 EVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 104/236 (44%), Gaps = 33/236 (13%)
Query: 93 KEATNNFEPASILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLV-----EVEM 146
K+ +F+ ILGEG F V L+ AIK L + KE V E ++
Sbjct: 4 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILE--KRHIIKENKVPYVTRERDV 61
Query: 147 LSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH--GPLGVNCHLDWETRMKI 204
+SRL H VKL Y++ +D + NG L ++ G C TR
Sbjct: 62 MSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYT 114
Query: 205 ALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAK----QAPEGRTNYL 260
A + L YLH +IHRD K NILL + H ++ DFG AK ++ + R N
Sbjct: 115 A-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 170
Query: 261 STRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLV 316
+GT YV+PE SD+++ G ++ +L+ G P +G E L+
Sbjct: 171 ----VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLI 218
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 102/219 (46%), Gaps = 31/219 (14%)
Query: 105 LGEGGFGRVF--------KGVLSDGTAVAIKRLTCGGQQGDKEFLV-EVEMLSRL-HHRN 154
LGEG FG+V K + VA+K L + D LV E+EM+ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 155 LVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHG--PLGVNCHLD----------WETRM 202
++ L+G ++D +++ E G+L +L P G+ D ++ +
Sbjct: 103 IITLLGA-CTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
ARG+ YL SQ C IHRD A N+L+ N K+ADFGLA+ +Y
Sbjct: 161 SCTYQLARGMEYLA--SQKC-IHRDLAARNVLVTENNVMKIADFGLARDI--NNIDYYKK 215
Query: 263 RVMGTF--GYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
G ++APE +SDV+S+GV++ E+ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 100/219 (45%), Gaps = 25/219 (11%)
Query: 105 LGEGGFGRVFKGVL------SDGTAVAIKRLTCGGQQG-DKEFLVEVEMLSRLHHRNLVK 157
LGE FG+V+KG L AVAIK L + +EF E + +RL H N+V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWL-----HGPLG-------VNCHLDWETRMKIA 205
L+G + + Y +G L +L H +G V L+ + +
Sbjct: 77 LLGVVTKDQPLSMIFSY--CSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 134
Query: 206 LDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVM 265
A G+ YL S V+H+D N+L+ + + K++D GL ++ L +
Sbjct: 135 AQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSL 191
Query: 266 GTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 303
++APE M G + SD++SYGVVL E+ + G +P
Sbjct: 192 LPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 230
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 104/236 (44%), Gaps = 33/236 (13%)
Query: 93 KEATNNFEPASILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLV-----EVEM 146
K+ +F+ ILGEG F V L+ AIK L + KE V E ++
Sbjct: 3 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILE--KRHIIKENKVPYVTRERDV 60
Query: 147 LSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH--GPLGVNCHLDWETRMKI 204
+SRL H VKL Y++ +D + NG L ++ G C TR
Sbjct: 61 MSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYT 113
Query: 205 ALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAK----QAPEGRTNYL 260
A + L YLH +IHRD K NILL + H ++ DFG AK ++ + R N
Sbjct: 114 A-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 169
Query: 261 STRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLV 316
+GT YV+PE SD+++ G ++ +L+ G P +G E L+
Sbjct: 170 ----VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLI 217
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 102/219 (46%), Gaps = 31/219 (14%)
Query: 105 LGEGGFGRVF--------KGVLSDGTAVAIKRLTCGGQQGDKEFLV-EVEMLSRL-HHRN 154
LGEG FG+V K + VA+K L + D LV E+EM+ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 155 LVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHG--PLGVNCHLD----------WETRM 202
++ L+G ++D +++ E G+L +L P G+ D ++ +
Sbjct: 103 IINLLGA-CTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
ARG+ YL SQ C IHRD A N+L+ N K+ADFGLA+ +Y
Sbjct: 161 SCTYQLARGMEYLA--SQKC-IHRDLAARNVLVTENNVMKIADFGLARDI--NNIDYYKK 215
Query: 263 RVMGTF--GYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
G ++APE +SDV+S+GV++ E+ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 97/207 (46%), Gaps = 20/207 (9%)
Query: 105 LGEGGFGRVFKGVL----SDGTAVAIKRLTCGGQQGD---KEFLVEVEMLSRLHHRNLVK 157
+GEG FG V +G+ + AVAIK TC D ++FL E + + H ++VK
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIK--TCKNCTSDSVREKFLQEALTMRQFDHPHIVK 103
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHE 217
L+G + + EL G L S+L LD + + A + LAYL
Sbjct: 104 LIGVITENPV---WIIMELCTLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYLES 157
Query: 218 DSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAM 277
+HRD A N+L+ +N K+ DFGL++ E T Y +++ ++APE
Sbjct: 158 KR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESIN 213
Query: 278 TGHLLVKSDVYSYGVVLLELLT-GRKP 303
SDV+ +GV + E+L G KP
Sbjct: 214 FRRFTSASDVWMFGVCMWEILMHGVKP 240
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 15/207 (7%)
Query: 104 ILGEGGFGRVFKGVLS----DGTAVAIKRLTCG-GQQGDKEFLVEVEMLSRLHHRNLVKL 158
++G G FG V G L VAIK L G ++ ++FL E ++ + H N++ L
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHL 88
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHED 218
G + S ++ E + NGSL+++L G + ++ + G+ YL
Sbjct: 89 EGVVTK--SKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLR---GISAGMKYL--- 140
Query: 219 SQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT-FGYVAPEYAM 277
S +HRD A NIL+ +N KV+DFGL++ + +TR + APE
Sbjct: 141 SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 200
Query: 278 TGHLLVKSDVYSYGVVLLELLT-GRKP 303
SDV+SYG+V+ E+++ G +P
Sbjct: 201 FRKFTSASDVWSYGIVMWEVVSYGERP 227
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 116/237 (48%), Gaps = 36/237 (15%)
Query: 86 FLAYEELKEATNNFEPASI------LGEGGFGRVFKGVLSDGTAVAI-KRLTCGGQQGDK 138
F + ++ + T + P LG+G FG+V+K + + +A K + ++ +
Sbjct: 20 FQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELE 79
Query: 139 EFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESW---LHGPLGVNCH 195
+++VE+++L+ H N+VKL+ + ++ L+ E G++++ L PL
Sbjct: 80 DYMVEIDILASCDHPNIVKLLDAFYYENNLWILI--EFCAGGAVDAVMLELERPLT---- 133
Query: 196 LDWETRMKIA----LDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQ 251
E+++++ LDA L YLH++ +IHRD KA NIL + K+ADFG++
Sbjct: 134 ---ESQIQVVCKQTLDA---LNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVS-- 182
Query: 252 APEGRTNYLSTRVMGTFGYVAPEYAMTGH-----LLVKSDVYSYGVVLLELLTGRKP 303
A R +GT ++APE M K+DV+S G+ L+E+ P
Sbjct: 183 AKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 97/207 (46%), Gaps = 20/207 (9%)
Query: 105 LGEGGFGRVFKGVL----SDGTAVAIKRLTCGGQQGD---KEFLVEVEMLSRLHHRNLVK 157
+GEG FG V +G+ + AVAIK TC D ++FL E + + H ++VK
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIK--TCKNCTSDSVREKFLQEALTMRQFDHPHIVK 80
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHE 217
L+G + + EL G L S+L LD + + A + LAYL
Sbjct: 81 LIGVITENPV---WIIMELCTLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYLES 134
Query: 218 DSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAM 277
+HRD A N+L+ +N K+ DFGL++ E T Y +++ ++APE
Sbjct: 135 KR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESIN 190
Query: 278 TGHLLVKSDVYSYGVVLLELLT-GRKP 303
SDV+ +GV + E+L G KP
Sbjct: 191 FRRFTSASDVWMFGVCMWEILMHGVKP 217
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 98/213 (46%), Gaps = 33/213 (15%)
Query: 104 ILGEGGFGRVFK---GVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVG 160
+LG+G FG V K + AV + + L EVE+L +L H N++KL
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL-- 86
Query: 161 YYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR-------GLA 213
+ DSS + EL G L + + H DAAR G+
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEH-----------DAARIIKQVFSGIT 135
Query: 214 YLHEDSQPCVIHRDFKASNILLEN---NFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
Y+H+ + ++HRD K NILLE+ + K+ DFGL+ + + R+ GT Y
Sbjct: 136 YMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK--MKDRI-GTAYY 189
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
+APE + G K DV+S GV+L LL+G P
Sbjct: 190 IAPE-VLRGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 18/206 (8%)
Query: 105 LGEGGFGRVFKGVLSD------GTAVAIKRLTCGGQQGDK-EFLVEVEMLSRLHHRNLVK 157
LG+G FG V++G D T VA+K + ++ EFL E ++ ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWLHG--PLGVNCH----LDWETRMKIALDAARG 211
L+G S + L+ EL+ +G L+S+L P N + +++A + A G
Sbjct: 85 LLGVVSKGQPT--LVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYV 271
+AYL+ +HRD A N ++ ++F K+ DFG+ + E + + ++
Sbjct: 143 MAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 272 APEYAMTGHLLVKSDVYSYGVVLLEL 297
APE G SD++S+GVVL E+
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 97/207 (46%), Gaps = 20/207 (9%)
Query: 105 LGEGGFGRVFKGVL----SDGTAVAIKRLTCGGQQGD---KEFLVEVEMLSRLHHRNLVK 157
+GEG FG V +G+ + AVAIK TC D ++FL E + + H ++VK
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIK--TCKNCTSDSVREKFLQEALTMRQFDHPHIVK 78
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHE 217
L+G + + EL G L S+L LD + + A + LAYL
Sbjct: 79 LIGVITENPV---WIIMELCTLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYLES 132
Query: 218 DSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAM 277
+HRD A N+L+ +N K+ DFGL++ E T Y +++ ++APE
Sbjct: 133 KR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESIN 188
Query: 278 TGHLLVKSDVYSYGVVLLELLT-GRKP 303
SDV+ +GV + E+L G KP
Sbjct: 189 FRRFTSASDVWMFGVCMWEILMHGVKP 215
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 116/237 (48%), Gaps = 36/237 (15%)
Query: 86 FLAYEELKEATNNFEPASI------LGEGGFGRVFKGVLSDGTAVAI-KRLTCGGQQGDK 138
F + ++ + T + P LG+G FG+V+K + + +A K + ++ +
Sbjct: 20 FQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELE 79
Query: 139 EFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESW---LHGPLGVNCH 195
+++VE+++L+ H N+VKL+ + ++ L+ E G++++ L PL
Sbjct: 80 DYMVEIDILASCDHPNIVKLLDAFYYENNLWILI--EFCAGGAVDAVMLELERPLT---- 133
Query: 196 LDWETRMKIA----LDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQ 251
E+++++ LDA L YLH++ +IHRD KA NIL + K+ADFG++
Sbjct: 134 ---ESQIQVVCKQTLDA---LNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVS-- 182
Query: 252 APEGRTNYLSTRVMGTFGYVAPEYAMTGH-----LLVKSDVYSYGVVLLELLTGRKP 303
A R +GT ++APE M K+DV+S G+ L+E+ P
Sbjct: 183 AKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 126/279 (45%), Gaps = 40/279 (14%)
Query: 105 LGEGGFGRVFKGVLSDGT-AVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYS 163
LG G +G V++GV + VA+K L + + EFL E ++ + H NLV+L+G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV-C 83
Query: 164 SRDSSQHLLCYELVPNGSLESWLHGPLGVNCH---LDWETRMKIALDAARGLAYLHEDSQ 220
+R+ +++ E + G+L +L C+ ++ + +A + + YL + +
Sbjct: 84 TREPPFYIIT-EFMTYGNLLDYLR-----ECNRQEVNAVVLLYMATQISSAMEYLEKKN- 136
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGH 280
IHRD A N L+ N KVADFGL++ G T + APE
Sbjct: 137 --FIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNK 193
Query: 281 LLVKSDVYSYGVVLLELLT-GRKP---VDMSQPSGQENLVTWARPILRDKDRLEELADPR 336
+KSDV+++GV+L E+ T G P +D+SQ +L R+E
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ----------VYELLEKDYRMER----- 238
Query: 337 LGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLK 375
P+ +V + AC + RP+ E+ Q+ +
Sbjct: 239 -----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 102/219 (46%), Gaps = 31/219 (14%)
Query: 105 LGEGGFGRVF--------KGVLSDGTAVAIKRLTCGGQQGDKEFLV-EVEMLSRL-HHRN 154
LGEG FG+V K + VA+K L + D LV E+EM+ + H+N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 155 LVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHG--PLGVNCHLD----------WETRM 202
++ L+G ++D +++ E G+L +L P G+ D ++ +
Sbjct: 149 IINLLGA-CTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 206
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
ARG+ YL SQ C IHRD A N+L+ N K+ADFGLA+ +Y
Sbjct: 207 SCTYQLARGMEYLA--SQKC-IHRDLAARNVLVTENNVMKIADFGLARDI--NNIDYYKK 261
Query: 263 RVMGTF--GYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
G ++APE +SDV+S+GV++ E+ T
Sbjct: 262 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 91/208 (43%), Gaps = 18/208 (8%)
Query: 105 LGEGGFGRVFKGVLS----DGTAVAIKRL---TCGGQQGDKEFLVEVEMLSRLHHRNLVK 157
LG+G FG V +G +VA+K L + +F+ EV + L HRNL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHE 217
L G + + EL P GSL L G H T + A+ A G+ YL
Sbjct: 76 LYGVVLTPPMK---MVTELAPLGSLLDRLRKHQG---HFLLGTLSRYAVQVAEGMGYLES 129
Query: 218 DSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTN-YLSTRVMGTFGYVAPEYA 276
IHRD A N+LL K+ DFGL + P+ + + F + APE
Sbjct: 130 KR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESL 186
Query: 277 MTGHLLVKSDVYSYGVVLLELLT-GRKP 303
T SD + +GV L E+ T G++P
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 102/219 (46%), Gaps = 31/219 (14%)
Query: 105 LGEGGFGRVF--------KGVLSDGTAVAIKRLTCGGQQGDKEFLV-EVEMLSRL-HHRN 154
LGEG FG+V K + VA+K L + D LV E+EM+ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 155 LVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHG--PLGVNCHLD----------WETRM 202
++ L+G ++D +++ E G+L +L P G+ D ++ +
Sbjct: 103 IIHLLGA-CTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
ARG+ YL SQ C IHRD A N+L+ N K+ADFGLA+ +Y
Sbjct: 161 SCTYQLARGMEYLA--SQKC-IHRDLAARNVLVTENNVMKIADFGLARDI--NNIDYYKK 215
Query: 263 RVMGTF--GYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
G ++APE +SDV+S+GV++ E+ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 126/279 (45%), Gaps = 40/279 (14%)
Query: 105 LGEGGFGRVFKGVLSDGT-AVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYS 163
LG G +G V++GV + VA+K L + + EFL E ++ + H NLV+L+G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV-C 83
Query: 164 SRDSSQHLLCYELVPNGSLESWLHGPLGVNCH---LDWETRMKIALDAARGLAYLHEDSQ 220
+R+ +++ E + G+L +L C+ ++ + +A + + YL + +
Sbjct: 84 TREPPFYIIT-EFMTYGNLLDYLR-----ECNRQEVNAVVLLYMATQISSAMEYLEKKN- 136
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGH 280
IHRD A N L+ N KVADFGL++ G T + APE
Sbjct: 137 --FIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 193
Query: 281 LLVKSDVYSYGVVLLELLT-GRKP---VDMSQPSGQENLVTWARPILRDKDRLEELADPR 336
+KSDV+++GV+L E+ T G P +D+SQ +L R+E
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ----------VYELLEKDYRMER----- 238
Query: 337 LGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLK 375
P+ +V + AC + RP+ E+ Q+ +
Sbjct: 239 -----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 91/208 (43%), Gaps = 18/208 (8%)
Query: 105 LGEGGFGRVFKGVLS----DGTAVAIKRL---TCGGQQGDKEFLVEVEMLSRLHHRNLVK 157
LG+G FG V +G +VA+K L + +F+ EV + L HRNL++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHE 217
L G + + EL P GSL L G H T + A+ A G+ YL
Sbjct: 86 LYGVVLTPPMK---MVTELAPLGSLLDRLRKHQG---HFLLGTLSRYAVQVAEGMGYLES 139
Query: 218 DSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTN-YLSTRVMGTFGYVAPEYA 276
IHRD A N+LL K+ DFGL + P+ + + F + APE
Sbjct: 140 KR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESL 196
Query: 277 MTGHLLVKSDVYSYGVVLLELLT-GRKP 303
T SD + +GV L E+ T G++P
Sbjct: 197 KTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 126/279 (45%), Gaps = 40/279 (14%)
Query: 105 LGEGGFGRVFKGVLSDGT-AVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYS 163
LG G +G V++GV + VA+K L + + EFL E ++ + H NLV+L+G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV-C 83
Query: 164 SRDSSQHLLCYELVPNGSLESWLHGPLGVNCH---LDWETRMKIALDAARGLAYLHEDSQ 220
+R+ +++ E + G+L +L C+ ++ + +A + + YL + +
Sbjct: 84 TREPPFYIII-EFMTYGNLLDYLR-----ECNRQEVNAVVLLYMATQISSAMEYLEKKN- 136
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGH 280
IHRD A N L+ N KVADFGL++ G T + APE
Sbjct: 137 --FIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 193
Query: 281 LLVKSDVYSYGVVLLELLT-GRKP---VDMSQPSGQENLVTWARPILRDKDRLEELADPR 336
+KSDV+++GV+L E+ T G P +D+SQ +L R+E
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ----------VYELLEKDYRMER----- 238
Query: 337 LGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLK 375
P+ +V + AC + RP+ E+ Q+ +
Sbjct: 239 -----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 126/279 (45%), Gaps = 40/279 (14%)
Query: 105 LGEGGFGRVFKGVLSDGT-AVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYS 163
LG G +G V++GV + VA+K L + + EFL E ++ + H NLV+L+G
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV-C 79
Query: 164 SRDSSQHLLCYELVPNGSLESWLHGPLGVNCH---LDWETRMKIALDAARGLAYLHEDSQ 220
+R+ +++ E + G+L +L C+ ++ + +A + + YL + +
Sbjct: 80 TREPPFYIII-EFMTYGNLLDYLR-----ECNRQEVNAVVLLYMATQISSAMEYLEKKN- 132
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGH 280
IHRD A N L+ N KVADFGL++ G T + APE
Sbjct: 133 --FIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNK 189
Query: 281 LLVKSDVYSYGVVLLELLT-GRKP---VDMSQPSGQENLVTWARPILRDKDRLEELADPR 336
+KSDV+++GV+L E+ T G P +D+SQ +L R+E
Sbjct: 190 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ----------VYELLEKDYRMER----- 234
Query: 337 LGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLK 375
P+ +V + AC + RP+ E+ Q+ +
Sbjct: 235 -----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 268
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 126/279 (45%), Gaps = 40/279 (14%)
Query: 105 LGEGGFGRVFKGVLSDGT-AVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYS 163
LG G +G V++GV + VA+K L + + EFL E ++ + H NLV+L+G
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV-C 79
Query: 164 SRDSSQHLLCYELVPNGSLESWLHGPLGVNCH---LDWETRMKIALDAARGLAYLHEDSQ 220
+R+ +++ E + G+L +L C+ ++ + +A + + YL + +
Sbjct: 80 TREPPFYIIT-EFMTYGNLLDYLR-----ECNRQEVNAVVLLYMATQISSAMEYLEKKN- 132
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGH 280
IHRD A N L+ N KVADFGL++ G T + APE
Sbjct: 133 --FIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAPAGAKFPIKWTAPESLAYNK 189
Query: 281 LLVKSDVYSYGVVLLELLT-GRKP---VDMSQPSGQENLVTWARPILRDKDRLEELADPR 336
+KSDV+++GV+L E+ T G P +D+SQ +L R+E
Sbjct: 190 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ----------VYELLEKDYRMER----- 234
Query: 337 LGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLK 375
P+ +V + AC + RP+ E+ Q+ +
Sbjct: 235 -----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 268
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 126/279 (45%), Gaps = 40/279 (14%)
Query: 105 LGEGGFGRVFKGVLSDGT-AVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYS 163
LG G +G V++GV + VA+K L + + EFL E ++ + H NLV+L+G
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV-C 82
Query: 164 SRDSSQHLLCYELVPNGSLESWLHGPLGVNCH---LDWETRMKIALDAARGLAYLHEDSQ 220
+R+ +++ E + G+L +L C+ ++ + +A + + YL + +
Sbjct: 83 TREPPFYIIT-EFMTYGNLLDYLR-----ECNRQEVNAVVLLYMATQISSAMEYLEKKN- 135
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGH 280
IHRD A N L+ N KVADFGL++ G T + APE
Sbjct: 136 --FIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 192
Query: 281 LLVKSDVYSYGVVLLELLT-GRKP---VDMSQPSGQENLVTWARPILRDKDRLEELADPR 336
+KSDV+++GV+L E+ T G P +D+SQ +L R+E
Sbjct: 193 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ----------VYELLEKDYRMER----- 237
Query: 337 LGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLK 375
P+ +V + AC + RP+ E+ Q+ +
Sbjct: 238 -----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 271
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 113/213 (53%), Gaps = 32/213 (15%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSR--LHHRNLVKLVGY- 161
+G+G +G V++G L G +VA+K + +Q + E E+ + L H N++ +
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQS---WFRETEIYNTVLLRHDNILGFIASD 71
Query: 162 YSSRDSSQHL-LCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHED-- 218
+SR+SS L L +GSL +L + HL +++A+ AA GLA+LH +
Sbjct: 72 MTSRNSSTQLWLITHYHEHGSLYDFLQRQ-TLEPHL----ALRLAVSAACGLAHLHVEIF 126
Query: 219 ---SQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST----RVMGTFGYV 271
+P + HRDFK+ N+L+++N +AD GLA +G ++YL RV GT Y+
Sbjct: 127 GTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQG-SDYLDIGNNPRV-GTKRYM 184
Query: 272 APEYAMTGHLLVK-------SDVYSYGVVLLEL 297
APE + + +D++++G+VL E+
Sbjct: 185 APE-VLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 101/213 (47%), Gaps = 16/213 (7%)
Query: 104 ILGEGGFGRVFKGVLS----DGTAVAIKRLTCG-GQQGDKEFLVEVEMLSRLHHRNLVKL 158
++G G FG V G L VAIK L G + ++FL E ++ + H N++ L
Sbjct: 21 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 80
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHED 218
G + ++ E + NGSL+++L G + ++ G+ YL +
Sbjct: 81 EGVVTK--CKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR---GIGSGMKYLSDM 135
Query: 219 SQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT-FGYVAPEYAM 277
S +HRD A NIL+ +N KV+DFG+++ + +TR + APE
Sbjct: 136 S---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 192
Query: 278 TGHLLVKSDVYSYGVVLLELLT-GRKPV-DMSQ 308
SDV+SYG+V+ E+++ G +P DMS
Sbjct: 193 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 225
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 126/279 (45%), Gaps = 40/279 (14%)
Query: 105 LGEGGFGRVFKGVLSDGT-AVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYS 163
LG G +G V++GV + VA+K L + + EFL E ++ + H NLV+L+G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV-C 78
Query: 164 SRDSSQHLLCYELVPNGSLESWLHGPLGVNCH---LDWETRMKIALDAARGLAYLHEDSQ 220
+R+ +++ E + G+L +L C+ ++ + +A + + YL + +
Sbjct: 79 TREPPFYIIT-EFMTYGNLLDYLR-----ECNRQEVNAVVLLYMATQISSAMEYLEKKN- 131
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGH 280
IHRD A N L+ N KVADFGL++ G T + APE
Sbjct: 132 --FIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 281 LLVKSDVYSYGVVLLELLT-GRKP---VDMSQPSGQENLVTWARPILRDKDRLEELADPR 336
+KSDV+++GV+L E+ T G P +D+SQ +L R+E
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ----------VYELLEKDYRMER----- 233
Query: 337 LGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLK 375
P+ +V + AC + RP+ E+ Q+ +
Sbjct: 234 -----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 126/279 (45%), Gaps = 40/279 (14%)
Query: 105 LGEGGFGRVFKGVLSDGT-AVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYS 163
LG G +G V++GV + VA+K L + + EFL E ++ + H NLV+L+G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV-C 83
Query: 164 SRDSSQHLLCYELVPNGSLESWLHGPLGVNCH---LDWETRMKIALDAARGLAYLHEDSQ 220
+R+ +++ E + G+L +L C+ ++ + +A + + YL + +
Sbjct: 84 TREPPFYIIT-EFMTYGNLLDYLR-----ECNRQEVNAVVLLYMATQISSAMEYLEKKN- 136
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGH 280
IHRD A N L+ N KVADFGL++ G T + APE
Sbjct: 137 --FIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 193
Query: 281 LLVKSDVYSYGVVLLELLT-GRKP---VDMSQPSGQENLVTWARPILRDKDRLEELADPR 336
+KSDV+++GV+L E+ T G P +D+SQ +L R+E
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ----------VYELLEKDYRMER----- 238
Query: 337 LGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLK 375
P+ +V + AC + RP+ E+ Q+ +
Sbjct: 239 -----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 126/279 (45%), Gaps = 40/279 (14%)
Query: 105 LGEGGFGRVFKGVLSDGT-AVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYS 163
LG G +G V++GV + VA+K L + + EFL E ++ + H NLV+L+G
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV-C 80
Query: 164 SRDSSQHLLCYELVPNGSLESWLHGPLGVNCH---LDWETRMKIALDAARGLAYLHEDSQ 220
+R+ +++ E + G+L +L C+ ++ + +A + + YL + +
Sbjct: 81 TREPPFYIIT-EFMTYGNLLDYLR-----ECNRQEVNAVVLLYMATQISSAMEYLEKKN- 133
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGH 280
IHRD A N L+ N KVADFGL++ G T + APE
Sbjct: 134 --FIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAPAGAKFPIKWTAPESLAYNK 190
Query: 281 LLVKSDVYSYGVVLLELLT-GRKP---VDMSQPSGQENLVTWARPILRDKDRLEELADPR 336
+KSDV+++GV+L E+ T G P +D+SQ +L R+E
Sbjct: 191 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ----------VYELLEKDYRMER----- 235
Query: 337 LGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLK 375
P+ +V + AC + RP+ E+ Q+ +
Sbjct: 236 -----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 269
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 127/287 (44%), Gaps = 38/287 (13%)
Query: 97 NNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCG-GQQGDKEFLVEVEMLSRLHHRN 154
++ EP LG G +G V K + G +A+KR+ Q K L+++++ R
Sbjct: 7 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCP 66
Query: 155 LVKLVGYYSSRDSSQHL-LCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLA 213
V +Y + + +C EL+ + SL+ + + + + KIA+ + L
Sbjct: 67 FT--VTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALE 123
Query: 214 YLHEDSQPCVIHRDFKASNILLENNFHAKVADFGL--------AKQAPEGRTNYLSTRVM 265
+LH S+ VIHRD K SN+L+ K+ DFG+ AK G Y++
Sbjct: 124 HLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPE-- 179
Query: 266 GTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRD 325
+ PE G+ VKSD++S G+ ++EL R P D +W P +
Sbjct: 180 ----RINPELNQKGY-SVKSDIWSLGITMIELAILRFPYD-----------SWGTPFQQL 223
Query: 326 KDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQ 372
K +EE P+L +F+ + C+ + +RPT E++Q
Sbjct: 224 KQVVEE-PSPQLPADKFSAEFV---DFTSQCLKKNSKERPTYPELMQ 266
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 103/229 (44%), Gaps = 27/229 (11%)
Query: 97 NNFEPASILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLV-----EVEMLSRL 150
+F+ ILGEG F V L+ AIK L + KE V E +++SRL
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILE--KRHIIKENKVPYVTRERDVMSRL 90
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH--GPLGVNCHLDWETRMKIALDA 208
H VKL Y++ +D + NG L ++ G C TR A +
Sbjct: 91 DHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA-EI 142
Query: 209 ARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAK-QAPEGRTNYLSTRVMGT 267
L YLH +IHRD K NILL + H ++ DFG AK +PE + ++ V GT
Sbjct: 143 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GT 198
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLV 316
YV+PE SD+++ G ++ +L+ G P +G E L+
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLI 243
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 106/244 (43%), Gaps = 26/244 (10%)
Query: 97 NNFEPASILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLV-----EVEMLSRL 150
+F+ ILGEG F V L+ AIK L + KE V E +++SRL
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILE--KRHIIKENKVPYVTRERDVMSRL 89
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH--GPLGVNCHLDWETRMKIALDA 208
H VKL Y++ +D + NG L ++ G C TR A +
Sbjct: 90 DHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA-EI 141
Query: 209 ARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF 268
L YLH +IHRD K NILL + H ++ DFG AK + +GT
Sbjct: 142 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 269 GYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDR 328
YV+PE SD+++ G ++ +L+ G P +G E L+ +A+ I + D
Sbjct: 199 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR----AGNEGLI-FAKIIKLEYDF 253
Query: 329 LEEL 332
E+
Sbjct: 254 PEKF 257
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 97/211 (45%), Gaps = 19/211 (9%)
Query: 99 FEPASILGEGGFGRVFKG---VLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNL 155
+ +LG+G FG V K + AV + + L EVE+L +L H N+
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 156 VKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYL 215
+KL + DSS + EL G L + + H +I G+ Y+
Sbjct: 84 MKL--FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEH----DAARIIKQVFSGITYM 137
Query: 216 HEDSQPCVIHRDFKASNILLEN---NFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVA 272
H+ + ++HRD K NILLE+ + K+ DFGL+ + + R+ GT Y+A
Sbjct: 138 HKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK--MKDRI-GTAYYIA 191
Query: 273 PEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
PE + G K DV+S GV+L LL+G P
Sbjct: 192 PE-VLRGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 102/219 (46%), Gaps = 31/219 (14%)
Query: 105 LGEGGFGRVF--------KGVLSDGTAVAIKRLTCGGQQGDKEFLV-EVEMLSRL-HHRN 154
LGEG FG+V K + VA+K L + D LV E+EM+ + H+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 155 LVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHG--PLGVNCHLD----------WETRM 202
++ L+G ++D +++ E G+L +L P G+ D ++ +
Sbjct: 90 IINLLGA-CTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 147
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
ARG+ YL SQ C IHRD A N+L+ N K+ADFGLA+ +Y
Sbjct: 148 SCTYQLARGMEYLA--SQKC-IHRDLTARNVLVTENNVMKIADFGLARDI--NNIDYYKK 202
Query: 263 RVMGTF--GYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
G ++APE +SDV+S+GV++ E+ T
Sbjct: 203 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 101/213 (47%), Gaps = 16/213 (7%)
Query: 104 ILGEGGFGRVFKGVLS----DGTAVAIKRLTCG-GQQGDKEFLVEVEMLSRLHHRNLVKL 158
++G G FG V G L VAIK L G + ++FL E ++ + H N++ L
Sbjct: 15 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 74
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHED 218
G + ++ E + NGSL+++L G + ++ G+ YL +
Sbjct: 75 EGVVTK--CKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR---GIGSGMKYLSDM 129
Query: 219 SQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT-FGYVAPEYAM 277
S +HRD A NIL+ +N KV+DFG+++ + +TR + APE
Sbjct: 130 S---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 186
Query: 278 TGHLLVKSDVYSYGVVLLELLT-GRKPV-DMSQ 308
SDV+SYG+V+ E+++ G +P DMS
Sbjct: 187 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 219
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 104/233 (44%), Gaps = 20/233 (8%)
Query: 76 GSLPHPTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQ 134
GS PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 1 GSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 135 Q--GDKEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGP 189
K E+ +L + H N++ L+ ++ S + LV + L + +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 190 LGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLA 249
+ H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGLA
Sbjct: 121 KLTDDHVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 250 KQAPEGRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
+ + T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 173 RHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 130/288 (45%), Gaps = 42/288 (14%)
Query: 105 LGEGGFGRVFKGVLSD------GTAVAIKRLTCGGQQGDK-EFLVEVEMLSRLHHRNLVK 157
LG+G FG V++G D T VA+K + ++ EFL E ++ ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWLHG--PLGVNCH----LDWETRMKIALDAARG 211
L+G S + L+ EL+ +G L+S+L P N + +++A + A G
Sbjct: 85 LLGVVSKGQPT--LVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFG-- 269
+AYL+ +HR+ A N ++ ++F K+ DFG+ + E T+Y G
Sbjct: 143 MAYLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE--TDYYRKGGKGLLPVR 197
Query: 270 YVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRL 329
++APE G SD++S+GVVL E+ + + QP L ++ L
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE-----QPYQG----------LSNEQVL 242
Query: 330 EELADPRLGGKYPKEDFI--RVCTIAAACVAPEANQRPTMGEVVQSLK 375
+ + D GG + D RV + C N RPT E+V LK
Sbjct: 243 KFVMD---GGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 125/277 (45%), Gaps = 36/277 (12%)
Query: 105 LGEGGFGRVFKGVLSDGT-AVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYS 163
LG G FG V++GV + VA+K L + + EFL E ++ + H NLV+L+G
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV-C 76
Query: 164 SRDSSQHLLCYELVPNGSLESWLHGPLGVNCH---LDWETRMKIALDAARGLAYLHEDSQ 220
+R+ +++ E + G+L +L C+ + + +A + + YL + +
Sbjct: 77 TREPPFYIIT-EFMTYGNLLDYLR-----ECNRQEVSAVVLLYMATQISSAMEYLEKKN- 129
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGH 280
IHRD A N L+ N KVADFGL++ G T + APE
Sbjct: 130 --FIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNK 186
Query: 281 LLVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARPILRDKD-RLEELADPRLG 338
+KSDV+++GV+L E+ T G P PS L+ +KD R+E
Sbjct: 187 FSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELL--------EKDYRMER------- 231
Query: 339 GKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLK 375
P+ +V + AC + RP+ E+ Q+ +
Sbjct: 232 ---PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 265
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 126/279 (45%), Gaps = 40/279 (14%)
Query: 105 LGEGGFGRVFKGVLSDGT-AVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYS 163
LG G +G V++GV + VA+K L + + EFL E ++ + H NLV+L+G
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV-C 80
Query: 164 SRDSSQHLLCYELVPNGSLESWLHGPLGVNCH---LDWETRMKIALDAARGLAYLHEDSQ 220
+R+ +++ E + G+L +L C+ ++ + +A + + YL + +
Sbjct: 81 TREPPFYIIT-EFMTYGNLLDYLR-----ECNRQEVNAVVLLYMATQISSAMEYLEKKN- 133
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGH 280
IHRD A N L+ N KVADFGL++ G T + APE
Sbjct: 134 --FIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 190
Query: 281 LLVKSDVYSYGVVLLELLT-GRKP---VDMSQPSGQENLVTWARPILRDKDRLEELADPR 336
+KSDV+++GV+L E+ T G P +D+SQ +L R+E
Sbjct: 191 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ----------VYELLEKDYRMER----- 235
Query: 337 LGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLK 375
P+ +V + AC + RP+ E+ Q+ +
Sbjct: 236 -----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 269
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 126/279 (45%), Gaps = 40/279 (14%)
Query: 105 LGEGGFGRVFKGVLSDGT-AVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYS 163
LG G +G V++GV + VA+K L + + EFL E ++ + H NLV+L+G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV-C 78
Query: 164 SRDSSQHLLCYELVPNGSLESWLHGPLGVNCH---LDWETRMKIALDAARGLAYLHEDSQ 220
+R+ +++ E + G+L +L C+ ++ + +A + + YL + +
Sbjct: 79 TREPPFYIIT-EFMTYGNLLDYLR-----ECNRQEVNAVVLLYMATQISSAMEYLEKKN- 131
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGH 280
IHRD A N L+ N KVADFGL++ G T + APE
Sbjct: 132 --FIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 281 LLVKSDVYSYGVVLLELLT-GRKP---VDMSQPSGQENLVTWARPILRDKDRLEELADPR 336
+KSDV+++GV+L E+ T G P +D+SQ +L R+E
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ----------VYELLEKDYRMER----- 233
Query: 337 LGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLK 375
P+ +V + AC + RP+ E+ Q+ +
Sbjct: 234 -----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 126/279 (45%), Gaps = 40/279 (14%)
Query: 105 LGEGGFGRVFKGVLSDGT-AVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYS 163
LG G +G V++GV + VA+K L + + EFL E ++ + H NLV+L+G
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV-C 91
Query: 164 SRDSSQHLLCYELVPNGSLESWLHGPLGVNCH---LDWETRMKIALDAARGLAYLHEDSQ 220
+R+ +++ E + G+L +L C+ ++ + +A + + YL + +
Sbjct: 92 TREPPFYIIT-EFMTYGNLLDYLR-----ECNRQEVNAVVLLYMATQISSAMEYLEKKN- 144
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGH 280
IHRD A N L+ N KVADFGL++ G T + APE
Sbjct: 145 --FIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 201
Query: 281 LLVKSDVYSYGVVLLELLT-GRKP---VDMSQPSGQENLVTWARPILRDKDRLEELADPR 336
+KSDV+++GV+L E+ T G P +D+SQ +L R+E
Sbjct: 202 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ----------VYELLEKDYRMER----- 246
Query: 337 LGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLK 375
P+ +V + AC + RP+ E+ Q+ +
Sbjct: 247 -----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 280
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 126/279 (45%), Gaps = 40/279 (14%)
Query: 105 LGEGGFGRVFKGVLSDGT-AVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYS 163
LG G +G V++GV + VA+K L + + EFL E ++ + H NLV+L+G
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV-C 80
Query: 164 SRDSSQHLLCYELVPNGSLESWLHGPLGVNCH---LDWETRMKIALDAARGLAYLHEDSQ 220
+R+ +++ E + G+L +L C+ ++ + +A + + YL + +
Sbjct: 81 TREPPFYIIT-EFMTYGNLLDYLR-----ECNRQEVNAVVLLYMATQISSAMEYLEKKN- 133
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGH 280
IHRD A N L+ N KVADFGL++ G T + APE
Sbjct: 134 --FIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 190
Query: 281 LLVKSDVYSYGVVLLELLT-GRKP---VDMSQPSGQENLVTWARPILRDKDRLEELADPR 336
+KSDV+++GV+L E+ T G P +D+SQ +L R+E
Sbjct: 191 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ----------VYELLEKDYRMER----- 235
Query: 337 LGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLK 375
P+ +V + AC + RP+ E+ Q+ +
Sbjct: 236 -----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 269
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 97/211 (45%), Gaps = 19/211 (9%)
Query: 99 FEPASILGEGGFGRVFK---GVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNL 155
+ +LG+G FG V K + AV + + L EVE+L +L H N+
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 156 VKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYL 215
+KL + DSS + EL G L + + H +I G+ Y+
Sbjct: 84 MKL--FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEH----DAARIIKQVFSGITYM 137
Query: 216 HEDSQPCVIHRDFKASNILLEN---NFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVA 272
H+ + ++HRD K NILLE+ + K+ DFGL+ + + R+ GT Y+A
Sbjct: 138 HKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK--MKDRI-GTAYYIA 191
Query: 273 PEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
PE + G K DV+S GV+L LL+G P
Sbjct: 192 PE-VLRGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 130/288 (45%), Gaps = 42/288 (14%)
Query: 105 LGEGGFGRVFKGVLSD------GTAVAIKRLTCGGQQGDK-EFLVEVEMLSRLHHRNLVK 157
LG+G FG V++G D T VA+K + ++ EFL E ++ ++V+
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWLHG--PLGVNCH----LDWETRMKIALDAARG 211
L+G S + L+ EL+ +G L+S+L P N + +++A + A G
Sbjct: 86 LLGVVSKGQPT--LVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 143
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFG-- 269
+AYL+ +HR+ A N ++ ++F K+ DFG+ + E T+Y G
Sbjct: 144 MAYLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE--TDYYRKGGKGLLPVR 198
Query: 270 YVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRL 329
++APE G SD++S+GVVL E+ + + QP L ++ L
Sbjct: 199 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE-----QPYQG----------LSNEQVL 243
Query: 330 EELADPRLGGKYPKEDFI--RVCTIAAACVAPEANQRPTMGEVVQSLK 375
+ + D GG + D RV + C N RPT E+V LK
Sbjct: 244 KFVMD---GGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 288
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 100/205 (48%), Gaps = 16/205 (7%)
Query: 105 LGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYS 163
LG+G FG+V+K + G A K + ++ ++++VE+E+L+ H +VKL+G Y
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 164 SRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCV 223
+ + E P G++++ + L ++ L + L +LH +
Sbjct: 87 H--DGKLWIMIEFCPGGAVDAIM---LELDRGLTEPQIQVVCRQMLEALNFLHSKR---I 138
Query: 224 IHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGHLL- 282
IHRD KA N+L+ ++ADFG++ A +T +GT ++APE M +
Sbjct: 139 IHRDLKAGNVLMTLEGDIRLADFGVS--AKNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 196
Query: 283 ----VKSDVYSYGVVLLELLTGRKP 303
K+D++S G+ L+E+ P
Sbjct: 197 TPYDYKADIWSLGITLIEMAQIEPP 221
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 106/244 (43%), Gaps = 26/244 (10%)
Query: 97 NNFEPASILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLV-----EVEMLSRL 150
+F+ ILGEG F V L+ AIK L + KE V E +++SRL
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILE--KRHIIKENKVPYVTRERDVMSRL 89
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH--GPLGVNCHLDWETRMKIALDA 208
H VKL Y++ +D + NG L ++ G C TR A +
Sbjct: 90 DHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA-EI 141
Query: 209 ARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF 268
L YLH +IHRD K NILL + H ++ DFG AK + +GT
Sbjct: 142 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 269 GYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDR 328
YV+PE SD+++ G ++ +L+ G P +G E L+ +A+ I + D
Sbjct: 199 QYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFR----AGNEGLI-FAKIIKLEYDF 253
Query: 329 LEEL 332
E+
Sbjct: 254 PEKF 257
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 102/219 (46%), Gaps = 31/219 (14%)
Query: 105 LGEGGFGRVF--------KGVLSDGTAVAIKRLTCGGQQGDKEFLV-EVEMLSRL-HHRN 154
LGEG FG+V K + VA+K L + D LV E+EM+ + H+N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 155 LVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHG--PLGVNCHLD----------WETRM 202
++ L+G ++D +++ E G+L +L P G+ D ++ +
Sbjct: 95 IINLLGA-CTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 152
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
ARG+ YL SQ C IHRD A N+L+ N K+ADFGLA+ +Y
Sbjct: 153 SCTYQLARGMEYLA--SQKC-IHRDLAARNVLVTENNVMKIADFGLARDI--NNIDYYKK 207
Query: 263 RVMGTF--GYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
G ++APE +SDV+S+GV++ E+ T
Sbjct: 208 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 98/228 (42%), Gaps = 25/228 (10%)
Query: 97 NNFEPASILGEGGFGR-VFKGVLSDGTAVAIKRLTCGGQQGDKEFLV-----EVEMLSRL 150
+F+ ILGEG F V L+ AIK L + KE V E +++SRL
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILE--KRHIIKENKVPYVTRERDVMSRL 87
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH--GPLGVNCHLDWETRMKIALDA 208
H VKL Y++ +D + NG L ++ G C TR A +
Sbjct: 88 DHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA-EI 139
Query: 209 ARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF 268
L YLH +IHRD K NILL + H ++ DFG AK + +GT
Sbjct: 140 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 196
Query: 269 GYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLV 316
YV+PE SD+++ G ++ +L+ G P +G E L+
Sbjct: 197 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLI 240
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 102/219 (46%), Gaps = 31/219 (14%)
Query: 105 LGEGGFGRVF--------KGVLSDGTAVAIKRLTCGGQQGDKEFLV-EVEMLSRL-HHRN 154
LGEG FG+V K + VA+K L + D LV E+EM+ + H+N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 155 LVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHG--PLGVNCHLD----------WETRM 202
++ L+G ++D +++ E G+L +L P G+ D ++ +
Sbjct: 92 IINLLGA-CTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 149
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
ARG+ YL SQ C IHRD A N+L+ N K+ADFGLA+ +Y
Sbjct: 150 SCTYQLARGMEYLA--SQKC-IHRDLAARNVLVTENNVMKIADFGLARDI--NNIDYYKK 204
Query: 263 RVMGTF--GYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
G ++APE +SDV+S+GV++ E+ T
Sbjct: 205 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 102/219 (46%), Gaps = 31/219 (14%)
Query: 105 LGEGGFGRVF--------KGVLSDGTAVAIKRLTCGGQQGDKEFLV-EVEMLSRL-HHRN 154
LGEG FG+V K + VA+K L + D LV E+EM+ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 155 LVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHG--PLGVNCHLD----------WETRM 202
++ L+G ++D +++ E G+L +L P G+ D ++ +
Sbjct: 103 IINLLGA-CTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
ARG+ YL SQ C IHRD A N+L+ N ++ADFGLA+ +Y
Sbjct: 161 SCTYQLARGMEYLA--SQKC-IHRDLAARNVLVTENNVMRIADFGLARDI--NNIDYYKK 215
Query: 263 RVMGTF--GYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
G ++APE +SDV+S+GV++ E+ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 98/228 (42%), Gaps = 25/228 (10%)
Query: 97 NNFEPASILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLV-----EVEMLSRL 150
+F+ ILGEG F V L+ AIK L + KE V E +++SRL
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILE--KRHIIKENKVPYVTRERDVMSRL 90
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH--GPLGVNCHLDWETRMKIALDA 208
H VKL Y++ +D + NG L ++ G C TR A +
Sbjct: 91 DHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA-EI 142
Query: 209 ARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF 268
L YLH +IHRD K NILL + H ++ DFG AK + +GT
Sbjct: 143 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 199
Query: 269 GYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLV 316
YV+PE SD+++ G ++ +L+ G P +G E L+
Sbjct: 200 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLI 243
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 97/215 (45%), Gaps = 16/215 (7%)
Query: 105 LGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYS 163
LGEGGF V L DG A+KR+ C QQ +E E +M +H N+++LV Y
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCL 96
Query: 164 SRDSSQH--LLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQP 221
++H L G+L + + L + + + L RGL +H
Sbjct: 97 RERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG-- 154
Query: 222 CVIHRDFKASNILLENNFHAKVADFGLAKQA---PEGRTNYLSTRVMG----TFGYVAPE 274
HRD K +NILL + + D G QA EG L+ + T Y APE
Sbjct: 155 -YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPE 213
Query: 275 -YAMTGHLLV--KSDVYSYGVVLLELLTGRKPVDM 306
+++ H ++ ++DV+S G VL ++ G P DM
Sbjct: 214 LFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDM 248
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 98/228 (42%), Gaps = 25/228 (10%)
Query: 97 NNFEPASILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLV-----EVEMLSRL 150
+F+ ILGEG F V L+ AIK L + KE V E +++SRL
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILE--KRHIIKENKVPYVTRERDVMSRL 87
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH--GPLGVNCHLDWETRMKIALDA 208
H VKL Y++ +D + NG L ++ G C TR A +
Sbjct: 88 DHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA-EI 139
Query: 209 ARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF 268
L YLH +IHRD K NILL + H ++ DFG AK + +GT
Sbjct: 140 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 196
Query: 269 GYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLV 316
YV+PE SD+++ G ++ +L+ G P +G E L+
Sbjct: 197 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLI 240
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 100/205 (48%), Gaps = 16/205 (7%)
Query: 105 LGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYS 163
LG+G FG+V+K + G A K + ++ ++++VE+E+L+ H +VKL+G Y
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 164 SRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCV 223
+ + E P G++++ + L ++ L + L +LH +
Sbjct: 79 H--DGKLWIMIEFCPGGAVDAIM---LELDRGLTEPQIQVVCRQMLEALNFLHSKR---I 130
Query: 224 IHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGHLL- 282
IHRD KA N+L+ ++ADFG++ A +T +GT ++APE M +
Sbjct: 131 IHRDLKAGNVLMTLEGDIRLADFGVS--AKNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 188
Query: 283 ----VKSDVYSYGVVLLELLTGRKP 303
K+D++S G+ L+E+ P
Sbjct: 189 TPYDYKADIWSLGITLIEMAQIEPP 213
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 122/273 (44%), Gaps = 37/273 (13%)
Query: 105 LGEGGFGRVFKGVLS-DGTAVAIKRLTCGGQQGDKEFLV-EVEMLSRLHHRNLVKLVGYY 162
+G+G FG VFKG+ + VAIK + + + E + E+ +LS+ + K G Y
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGSY 90
Query: 163 SSRDSSQHLLCYELVPNGS-LESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQP 221
S+ + E + GS L+ GP T +K L +GL YLH + +
Sbjct: 91 LK--GSKLWIIMEYLGGGSALDLLRAGPFD---EFQIATMLKEIL---KGLDYLHSEKK- 141
Query: 222 CVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGHL 281
IHRD KA+N+LL K+ADFG+A Q + T +GT ++APE
Sbjct: 142 --IHRDIKAANVLLSEQGDVKLADFGVAGQLTD--TQIKRNTFVGTPFWMAPEVIQQSAY 197
Query: 282 LVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRLEELADPRLGGKY 341
K+D++S G+ +EL G P P L+ P P L G +
Sbjct: 198 DSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNP-------------PTLVGDF 244
Query: 342 PK--EDFIRVCTIAAACVAPEANQRPTMGEVVQ 372
K ++FI AC+ + + RPT E+++
Sbjct: 245 TKSFKEFID------ACLNKDPSFRPTAKELLK 271
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 98/228 (42%), Gaps = 25/228 (10%)
Query: 97 NNFEPASILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLV-----EVEMLSRL 150
+F+ ILGEG F V L+ AIK L + KE V E +++SRL
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILE--KRHIIKENKVPYVTRERDVMSRL 87
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH--GPLGVNCHLDWETRMKIALDA 208
H VKL Y++ +D + NG L ++ G C TR A +
Sbjct: 88 DHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA-EI 139
Query: 209 ARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF 268
L YLH +IHRD K NILL + H ++ DFG AK + +GT
Sbjct: 140 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 196
Query: 269 GYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLV 316
YV+PE SD+++ G ++ +L+ G P +G E L+
Sbjct: 197 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLI 240
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 105/208 (50%), Gaps = 21/208 (10%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
LG G FG V G VA+K + G D EF E + + +L H LVK G S
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSED-EFFQEAQTMMKLSHPKLVKFYGV-CS 73
Query: 165 RDSSQHLLCYELVPNGSLESWL--HGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPC 222
++ +++ E + NG L ++L HG L+ +++ D G+A+L E Q
Sbjct: 74 KEYPIYIVT-EYISNGCLLNYLRSHGK-----GLEPSQLLEMCYDVCEGMAFL-ESHQ-- 124
Query: 223 VIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT---FGYVAPEYAMTG 279
IHRD A N L++ + KV+DFG+ + + + Y+S+ +GT + APE
Sbjct: 125 FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ--YVSS--VGTKFPVKWSAPEVFHYF 180
Query: 280 HLLVKSDVYSYGVVLLELLT-GRKPVDM 306
KSDV+++G+++ E+ + G+ P D+
Sbjct: 181 KYSSKSDVWAFGILMWEVFSLGKMPYDL 208
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 104/234 (44%), Gaps = 20/234 (8%)
Query: 75 GGSLPHPTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGG 133
G S PT R + + E ++ S +G G +G V G VA+K+L+
Sbjct: 11 GMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF 70
Query: 134 QQ--GDKEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHG 188
Q K E+ +L + H N++ L+ ++ S + LV + L + +
Sbjct: 71 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC 130
Query: 189 PLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGL 248
+ H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGL
Sbjct: 131 QKLTDDHVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGL 182
Query: 249 AKQAPEGRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
A+ + T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 183 ARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 98/228 (42%), Gaps = 25/228 (10%)
Query: 97 NNFEPASILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLV-----EVEMLSRL 150
+F+ ILGEG F V L+ AIK L + KE V E +++SRL
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILE--KRHIIKENKVPYVTRERDVMSRL 89
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH--GPLGVNCHLDWETRMKIALDA 208
H VKL Y++ +D + NG L ++ G C TR A +
Sbjct: 90 DHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA-EI 141
Query: 209 ARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF 268
L YLH +IHRD K NILL + H ++ DFG AK + +GT
Sbjct: 142 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 269 GYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLV 316
YV+PE SD+++ G ++ +L+ G P +G E L+
Sbjct: 199 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLI 242
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 7/205 (3%)
Query: 98 NFEPASILGEGGFGRVFK-GVLSDGTAVAIKRLTCGGQ-QGDKEFLV-EVEMLSRLHHRN 154
++E +G G +GR K SDG + K L G + +K+ LV EV +L L H N
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 66
Query: 155 LVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAY 214
+V+ R ++ + E G L S + +LD E +++ L
Sbjct: 67 IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 126
Query: 215 LHE--DSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVA 272
H D V+HRD K +N+ L+ + K+ DFGLA+ T++ T V GT Y++
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD-TSFAKTFV-GTPYYMS 184
Query: 273 PEYAMTGHLLVKSDVYSYGVVLLEL 297
PE KSD++S G +L EL
Sbjct: 185 PEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 98/228 (42%), Gaps = 25/228 (10%)
Query: 97 NNFEPASILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLV-----EVEMLSRL 150
+F+ ILGEG F V L+ AIK L + KE V E +++SRL
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILE--KRHIIKENKVPYVTRERDVMSRL 89
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH--GPLGVNCHLDWETRMKIALDA 208
H VKL Y++ +D + NG L ++ G C TR A +
Sbjct: 90 DHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA-EI 141
Query: 209 ARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF 268
L YLH +IHRD K NILL + H ++ DFG AK + +GT
Sbjct: 142 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 269 GYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLV 316
YV+PE SD+++ G ++ +L+ G P +G E L+
Sbjct: 199 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLI 242
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 127/288 (44%), Gaps = 42/288 (14%)
Query: 105 LGEGGFGRVFKGVLSD------GTAVAIKRLTCGGQQGDK-EFLVEVEMLSRLHHRNLVK 157
LG+G FG V++G D T VA+K + ++ EFL E ++ ++V+
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWLHG--PLGVNCH----LDWETRMKIALDAARG 211
L+G S + L+ EL+ +G L+S+L P N + +++A + A G
Sbjct: 84 LLGVVSKGQPT--LVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 141
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFG-- 269
+AYL+ +HRD A N ++ ++F K+ DFG+ + E T+Y G
Sbjct: 142 MAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE--TDYYRKGGKGLLPVR 196
Query: 270 YVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRL 329
++APE G SD++S+GVVL E+ + L L ++ L
Sbjct: 197 WMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVL 241
Query: 330 EELADPRLGGKYPKEDFI--RVCTIAAACVAPEANQRPTMGEVVQSLK 375
+ + D GG + D RV + C RPT E+V LK
Sbjct: 242 KFVMD---GGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 286
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 125/279 (44%), Gaps = 40/279 (14%)
Query: 105 LGEGGFGRVFKGVLSDGT-AVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYS 163
LG G +G V++GV + VA+K L + + EFL E ++ + H NLV+L+G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV-C 83
Query: 164 SRDSSQHLLCYELVPNGSLESWLHGPLGVNCH---LDWETRMKIALDAARGLAYLHEDSQ 220
+R+ +++ E + G+L +L C+ + + +A + + YL + +
Sbjct: 84 TREPPFYIIT-EFMTYGNLLDYLR-----ECNRQEVSAVVLLYMATQISSAMEYLEKKN- 136
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGH 280
IHRD A N L+ N KVADFGL++ G T + APE
Sbjct: 137 --FIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 193
Query: 281 LLVKSDVYSYGVVLLELLT-GRKP---VDMSQPSGQENLVTWARPILRDKDRLEELADPR 336
+KSDV+++GV+L E+ T G P +D+SQ +L R+E
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ----------VYELLEKDYRMER----- 238
Query: 337 LGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLK 375
P+ +V + AC + RP+ E+ Q+ +
Sbjct: 239 -----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 102/229 (44%), Gaps = 27/229 (11%)
Query: 97 NNFEPASILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLV-----EVEMLSRL 150
+F+ ILGEG F V L+ AIK L + KE V E +++SRL
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILE--KRHIIKENKVPYVTRERDVMSRL 87
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH--GPLGVNCHLDWETRMKIALDA 208
H VKL Y++ +D + NG L ++ G C TR A +
Sbjct: 88 DHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA-EI 139
Query: 209 ARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAK-QAPEGRTNYLSTRVMGT 267
L YLH +IHRD K NILL + H ++ DFG AK +PE + + V GT
Sbjct: 140 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFV-GT 195
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLV 316
YV+PE SD+++ G ++ +L+ G P +G E L+
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLI 240
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 98/228 (42%), Gaps = 25/228 (10%)
Query: 97 NNFEPASILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLV-----EVEMLSRL 150
+F+ ILGEG F V L+ AIK L + KE V E +++SRL
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILE--KRHIIKENKVPYVTRERDVMSRL 89
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH--GPLGVNCHLDWETRMKIALDA 208
H VKL Y++ +D + NG L ++ G C TR A +
Sbjct: 90 DHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA-EI 141
Query: 209 ARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF 268
L YLH +IHRD K NILL + H ++ DFG AK + +GT
Sbjct: 142 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 269 GYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLV 316
YV+PE SD+++ G ++ +L+ G P +G E L+
Sbjct: 199 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLI 242
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 98/220 (44%), Gaps = 18/220 (8%)
Query: 91 ELKEATNNFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEF---LVEVEM 146
++K +FE +LG+G FG+VF AIK L D + +VE +
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 147 LS-RLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCH-LDWETRMKI 204
LS H L + + ++++ E + G L + +CH D
Sbjct: 72 LSLAWEHPFLTHMFCTFQTKENL--FFVMEYLNGGDLMYHIQ-----SCHKFDLSRATFY 124
Query: 205 ALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRV 264
A + GL +LH +++RD K NILL+ + H K+ADFG+ K+ G +
Sbjct: 125 AAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TNEF 179
Query: 265 MGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPV 304
GT Y+APE + D +S+GV+L E+L G+ P
Sbjct: 180 CGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 219
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 103/228 (45%), Gaps = 27/228 (11%)
Query: 98 NFEPASILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLV-----EVEMLSRLH 151
+F+ ILGEG F V L+ AIK L + KE V E +++SRL
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILE--KRHIIKENKVPYVTRERDVMSRLD 87
Query: 152 HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH--GPLGVNCHLDWETRMKIALDAA 209
H VKL Y++ +D + NG L ++ G C TR A +
Sbjct: 88 HPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA-EIV 139
Query: 210 RGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAK-QAPEGRTNYLSTRVMGTF 268
L YLH +IHRD K NILL + H ++ DFG AK +PE + ++ V GT
Sbjct: 140 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTA 195
Query: 269 GYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLV 316
YV+PE SD+++ G ++ +L+ G P +G E L+
Sbjct: 196 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLI 239
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 100/237 (42%), Gaps = 37/237 (15%)
Query: 97 NNFEPASILGEGGFGRVFK----GVL--SDGTAVAIKRL---TCGGQQGDKEFLVEVEML 147
NN E +GEG FGRVF+ G+L T VA+K L Q D F E ++
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQAD--FQREAALM 104
Query: 148 SRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHG--PLGVNC--HLDWETRMK 203
+ + N+VKL+G + L +E + G L +L P V H D TR +
Sbjct: 105 AEFDNPNIVKLLGVCAV--GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRAR 162
Query: 204 ----------------IALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFG 247
IA A G+AYL E +HRD N L+ N K+ADFG
Sbjct: 163 VSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVHRDLATRNCLVGENMVVKIADFG 219
Query: 248 LAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 303
L++ ++ PE +SDV++YGVVL E+ + G +P
Sbjct: 220 LSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP 276
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 98/228 (42%), Gaps = 25/228 (10%)
Query: 97 NNFEPASILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLV-----EVEMLSRL 150
+F+ ILGEG F V L+ AIK L + KE V E +++SRL
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILE--KRHIIKENKVPYVTRERDVMSRL 92
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH--GPLGVNCHLDWETRMKIALDA 208
H VKL Y++ +D + NG L ++ G C TR A +
Sbjct: 93 DHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA-EI 144
Query: 209 ARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF 268
L YLH +IHRD K NILL + H ++ DFG AK + +GT
Sbjct: 145 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 201
Query: 269 GYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLV 316
YV+PE SD+++ G ++ +L+ G P +G E L+
Sbjct: 202 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLI 245
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 104/234 (44%), Gaps = 20/234 (8%)
Query: 75 GGSLPHPTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGG 133
G S PT R + + E ++ S +G G +G V G VA+K+L+
Sbjct: 11 GMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF 70
Query: 134 QQ--GDKEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHG 188
Q K E+ +L + H N++ L+ ++ S + LV + L + +
Sbjct: 71 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC 130
Query: 189 PLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGL 248
+ H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGL
Sbjct: 131 QKLTDDHVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGL 182
Query: 249 AKQAPEGRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
A+ + T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 183 ARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 129/288 (44%), Gaps = 42/288 (14%)
Query: 105 LGEGGFGRVFKGVLSD------GTAVAIKRLTCGGQQGDK-EFLVEVEMLSRLHHRNLVK 157
LG+G FG V++G D T VA+K + ++ EFL E ++ ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWLHG--PLGVNCH----LDWETRMKIALDAARG 211
L+G S + L+ EL+ +G L+S+L P N + +++A + A G
Sbjct: 85 LLGVVSKGQPT--LVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFG-- 269
+AYL+ +HRD A N ++ ++F K+ DFG+ + E T+Y G
Sbjct: 143 MAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE--TDYYRKGGKGLLPVR 197
Query: 270 YVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRL 329
++APE G SD++S+GVVL E+ + + QP L ++ L
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE-----QPYQG----------LSNEQVL 242
Query: 330 EELADPRLGGKYPKEDFI--RVCTIAAACVAPEANQRPTMGEVVQSLK 375
+ + D GG + D RV + C RPT E+V LK
Sbjct: 243 KFVMD---GGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 102/232 (43%), Gaps = 33/232 (14%)
Query: 97 NNFEPASILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLV-----EVEMLSRL 150
+F+ ILGEG F V L+ AIK L + KE V E +++SRL
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILE--KRHIIKENKVPYVTRERDVMSRL 71
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH--GPLGVNCHLDWETRMKIALDA 208
H VKL Y++ +D + NG L ++ G C TR A +
Sbjct: 72 DHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA-EI 123
Query: 209 ARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAK----QAPEGRTNYLSTRV 264
L YLH +IHRD K NILL + H ++ DFG AK ++ + R N
Sbjct: 124 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF---- 176
Query: 265 MGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLV 316
+GT YV+PE SD+++ G ++ +L+ G P +G E L+
Sbjct: 177 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLI 224
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 125/279 (44%), Gaps = 40/279 (14%)
Query: 105 LGEGGFGRVFKGVLSDGT-AVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYS 163
LG G +G V++GV + VA+K L + + EFL E ++ + H NLV+L+G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV-C 78
Query: 164 SRDSSQHLLCYELVPNGSLESWLHGPLGVNCH---LDWETRMKIALDAARGLAYLHEDSQ 220
+R+ +++ E + G+L +L C+ + + +A + + YL + +
Sbjct: 79 TREPPFYIII-EFMTYGNLLDYLR-----ECNRQEVSAVVLLYMATQISSAMEYLEKKN- 131
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGH 280
IHRD A N L+ N KVADFGL++ G T + APE
Sbjct: 132 --FIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 281 LLVKSDVYSYGVVLLELLT-GRKP---VDMSQPSGQENLVTWARPILRDKDRLEELADPR 336
+KSDV+++GV+L E+ T G P +D+SQ +L R+E
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ----------VYELLEKDYRMER----- 233
Query: 337 LGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLK 375
P+ +V + AC + RP+ E+ Q+ +
Sbjct: 234 -----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 106/218 (48%), Gaps = 19/218 (8%)
Query: 93 KEATNNFEPASILGEGGFGRVF---KGVLSD-GTAVAIKRLTCGGQQGDKEFLVEVE--M 146
K ++FE +LG+G FG+VF K D G A+K L + ++E +
Sbjct: 24 KADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDI 83
Query: 147 LSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIAL 206
L+ ++H +VKL +Y+ + + L + + G L + L + E +K L
Sbjct: 84 LADVNHPFVVKL--HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFT-----EEDVKFYL 136
Query: 207 -DAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVM 265
+ A GL +LH +I+RD K NILL+ H K+ DFGL+K+A + S
Sbjct: 137 AELALGLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS--FC 191
Query: 266 GTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
GT Y+APE +D +SYGV++ E+LTG P
Sbjct: 192 GTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLP 229
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 125/279 (44%), Gaps = 40/279 (14%)
Query: 105 LGEGGFGRVFKGVLSDGT-AVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYS 163
LG G +G V++GV + VA+K L + + EFL E ++ + H NLV+L+G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV-C 78
Query: 164 SRDSSQHLLCYELVPNGSLESWLHGPLGVNCH---LDWETRMKIALDAARGLAYLHEDSQ 220
+R+ +++ E + G+L +L C+ + + +A + + YL + +
Sbjct: 79 TREPPFYIIT-EFMTYGNLLDYLR-----ECNRQEVSAVVLLYMATQISSAMEYLEKKN- 131
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGH 280
IHRD A N L+ N KVADFGL++ G T + APE
Sbjct: 132 --FIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 281 LLVKSDVYSYGVVLLELLT-GRKP---VDMSQPSGQENLVTWARPILRDKDRLEELADPR 336
+KSDV+++GV+L E+ T G P +D+SQ +L R+E
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ----------VYELLEKDYRMER----- 233
Query: 337 LGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLK 375
P+ +V + AC + RP+ E+ Q+ +
Sbjct: 234 -----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 125/279 (44%), Gaps = 40/279 (14%)
Query: 105 LGEGGFGRVFKGVLSDGT-AVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYS 163
LG G +G V++GV + VA+K L + + EFL E ++ + H NLV+L+G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV-C 78
Query: 164 SRDSSQHLLCYELVPNGSLESWLHGPLGVNCH---LDWETRMKIALDAARGLAYLHEDSQ 220
+R+ +++ E + G+L +L C+ + + +A + + YL + +
Sbjct: 79 TREPPFYIIT-EFMTYGNLLDYLR-----ECNRQEVSAVVLLYMATQISSAMEYLEKKN- 131
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGH 280
IHRD A N L+ N KVADFGL++ G T + APE
Sbjct: 132 --FIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 281 LLVKSDVYSYGVVLLELLT-GRKP---VDMSQPSGQENLVTWARPILRDKDRLEELADPR 336
+KSDV+++GV+L E+ T G P +D+SQ +L R+E
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ----------VYELLEKDYRMER----- 233
Query: 337 LGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLK 375
P+ +V + AC + RP+ E+ Q+ +
Sbjct: 234 -----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 105/232 (45%), Gaps = 38/232 (16%)
Query: 98 NFEPASILGEGGFGRVFK----GVLSDGTA--VAIKRLTCGGQQGDKEFLV-EVEMLSRL 150
N E +LG G FG+V G+ G + VA+K L ++E L+ E++M+++L
Sbjct: 46 NLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQL 105
Query: 151 -HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGP-------------------- 189
H N+V L+G + S L +E G L ++L
Sbjct: 106 GSHENIVNLLG--ACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEE 163
Query: 190 --LGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFG 247
L V L +E + A A+G+ +L + + CV HRD A N+L+ + K+ DFG
Sbjct: 164 EDLNV---LTFEDLLCFAYQVAKGMEFL--EFKSCV-HRDLAARNVLVTHGKVVKICDFG 217
Query: 248 LAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
LA+ + ++APE G +KSDV+SYG++L E+ +
Sbjct: 218 LARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 103/229 (44%), Gaps = 27/229 (11%)
Query: 97 NNFEPASILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLV-----EVEMLSRL 150
+F+ ILGEG F V L+ AIK L + KE V E +++SRL
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILE--KRHIIKENKVPYVTRERDVMSRL 89
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH--GPLGVNCHLDWETRMKIALDA 208
H VKL Y++ +D + NG L ++ G C TR A +
Sbjct: 90 DHPFFVKL--YFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETC-----TRFYTA-EI 141
Query: 209 ARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAK-QAPEGRTNYLSTRVMGT 267
L YLH +IHRD K NILL + H ++ DFG AK +PE + ++ V GT
Sbjct: 142 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GT 197
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLV 316
YV+PE SD+++ G ++ +L+ G P +G E L+
Sbjct: 198 AQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFR----AGNEYLI 242
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 127/286 (44%), Gaps = 38/286 (13%)
Query: 105 LGEGGFGRVFKGVLSD------GTAVAIKRLTCGGQQGDK-EFLVEVEMLSRLHHRNLVK 157
LG+G FG V++G D T VA+K + ++ EFL E ++ ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWLHG--PLGVNCH----LDWETRMKIALDAARG 211
L+G S + L+ EL+ +G L+S+L P N + +++A + A G
Sbjct: 85 LLGVVSKGQPT--LVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYV 271
+AYL+ +HRD A N ++ ++F K+ DFG+ + E + + ++
Sbjct: 143 MAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWM 199
Query: 272 APEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRLEE 331
APE G SD++S+GVVL E+ + + QP L ++ L+
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAE-----QPYQG----------LSNEQVLKF 244
Query: 332 LADPRLGGKYPKEDFI--RVCTIAAACVAPEANQRPTMGEVVQSLK 375
+ D GG + D RV + C RPT E+V LK
Sbjct: 245 VMD---GGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 125/277 (45%), Gaps = 36/277 (12%)
Query: 105 LGEGGFGRVFKGVLSDGT-AVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYS 163
LG G +G V++GV + VA+K L + + EFL E ++ + H NLV+L+G
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV-C 76
Query: 164 SRDSSQHLLCYELVPNGSLESWLHGPLGVNCH---LDWETRMKIALDAARGLAYLHEDSQ 220
+R+ +++ E + G+L +L C+ + + +A + + YL + +
Sbjct: 77 TREPPFYIII-EFMTYGNLLDYLR-----ECNRQEVSAVVLLYMATQISSAMEYLEKKN- 129
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGH 280
IHRD A N L+ N KVADFGL++ G T + APE
Sbjct: 130 --FIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNK 186
Query: 281 LLVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARPILRDKD-RLEELADPRLG 338
+KSDV+++GV+L E+ T G P PS L+ +KD R+E
Sbjct: 187 FSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELL--------EKDYRMER------- 231
Query: 339 GKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLK 375
P+ +V + AC + RP+ E+ Q+ +
Sbjct: 232 ---PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 265
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 125/279 (44%), Gaps = 40/279 (14%)
Query: 105 LGEGGFGRVFKGVLSDGT-AVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYS 163
LG G +G V++GV + VA+K L + + EFL E ++ + H NLV+L+G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV-C 78
Query: 164 SRDSSQHLLCYELVPNGSLESWLHGPLGVNCH---LDWETRMKIALDAARGLAYLHEDSQ 220
+R+ +++ E + G+L +L C+ + + +A + + YL + +
Sbjct: 79 TREPPFYIII-EFMTYGNLLDYLR-----ECNRQEVSAVVLLYMATQISSAMEYLEKKN- 131
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGH 280
IHRD A N L+ N KVADFGL++ G T + APE
Sbjct: 132 --FIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 281 LLVKSDVYSYGVVLLELLT-GRKP---VDMSQPSGQENLVTWARPILRDKDRLEELADPR 336
+KSDV+++GV+L E+ T G P +D+SQ +L R+E
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ----------VYELLEKDYRMER----- 233
Query: 337 LGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLK 375
P+ +V + AC + RP+ E+ Q+ +
Sbjct: 234 -----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 99/219 (45%), Gaps = 31/219 (14%)
Query: 105 LGEGGFGRVF--------KGVLSDGTAVAIKRLTCGGQQGDKEFLV-EVEMLSRL-HHRN 154
LGEG FG+V K + VA+K L + D LV E+EM+ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 155 LVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHG--PLGVNCHLD----------WETRM 202
++ L+G + ++ Y G+L +L P G+ D ++ +
Sbjct: 103 IINLLGACTQDGPLYVIVAY--ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
ARG+ YL SQ C IHRD A N+L+ N K+ADFGLA+ +Y
Sbjct: 161 SCTYQLARGMEYLA--SQKC-IHRDLAARNVLVTENNVMKIADFGLARDI--NNIDYYKK 215
Query: 263 RVMGTF--GYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
G ++APE +SDV+S+GV++ E+ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 92/205 (44%), Gaps = 7/205 (3%)
Query: 98 NFEPASILGEGGFGRVFK-GVLSDGTAVAIKRLTCGGQ-QGDKEFLV-EVEMLSRLHHRN 154
++E +G G +GR K SDG + K L G + +K+ LV EV +L L H N
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 66
Query: 155 LVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAY 214
+V+ R ++ + E G L S + +LD E +++ L
Sbjct: 67 IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 126
Query: 215 LHE--DSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVA 272
H D V+HRD K +N+ L+ + K+ DFGLA+ + +GT Y++
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDED--FAKEFVGTPYYMS 184
Query: 273 PEYAMTGHLLVKSDVYSYGVVLLEL 297
PE KSD++S G +L EL
Sbjct: 185 PEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 97/228 (42%), Gaps = 25/228 (10%)
Query: 97 NNFEPASILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLV-----EVEMLSRL 150
+F+ ILGEG F V L+ AIK L + KE V E +++SRL
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILE--KRHIIKENKVPYVTRERDVMSRL 94
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH--GPLGVNCHLDWETRMKIALDA 208
H VKL Y+ +D + NG L ++ G C TR A +
Sbjct: 95 DHPFFVKL--YFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA-EI 146
Query: 209 ARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF 268
L YLH +IHRD K NILL + H ++ DFG AK + +GT
Sbjct: 147 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 203
Query: 269 GYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLV 316
YV+PE SD+++ G ++ +L+ G P +G E L+
Sbjct: 204 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLI 247
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 102/231 (44%), Gaps = 33/231 (14%)
Query: 98 NFEPASILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLV-----EVEMLSRLH 151
+F+ ILGEG F V L+ AIK L + KE V E +++SRL
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILE--KRHIIKENKVPYVTRERDVMSRLD 87
Query: 152 HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH--GPLGVNCHLDWETRMKIALDAA 209
H VKL Y++ +D + NG L ++ G C TR A +
Sbjct: 88 HPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA-EIV 139
Query: 210 RGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAK----QAPEGRTNYLSTRVM 265
L YLH +IHRD K NILL + H ++ DFG AK ++ + R N +
Sbjct: 140 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF----V 192
Query: 266 GTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLV 316
GT YV+PE SD+++ G ++ +L+ G P +G E L+
Sbjct: 193 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLI 239
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 104/224 (46%), Gaps = 20/224 (8%)
Query: 96 TNNFEPASILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLV----EVEMLSRL 150
++ +E ILG GG V L VA+K L + D F + E + + L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLAR-DPSFYLRFRREAQNAAAL 69
Query: 151 HHRNLVKLVGYYSSRDSSQHL--LCYELVPNGSLESWLH--GPLGVNCHLDWETRMKIAL 206
+H +V + + + L + E V +L +H GP+ + +++
Sbjct: 70 NHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM------TPKRAIEVIA 123
Query: 207 DAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQ-APEGRTNYLSTRVM 265
DA + L + H++ +IHRD K +NI++ KV DFG+A+ A G + + V+
Sbjct: 124 DACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 266 GTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
GT Y++PE A + +SDVYS G VL E+LTG P P
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 108/220 (49%), Gaps = 29/220 (13%)
Query: 95 ATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQGDKEFLV-EVEMLSRLHH 152
+++ F+ LG G + V+KG+ + G VA+K + ++G + E+ ++ L H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 153 RNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWL------HGPLGVNCHL----DWETRM 202
N+V+L Y ++ L +E + N L+ ++ + P G+ +L W+
Sbjct: 63 ENIVRL--YDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQ--- 116
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
+GLA+ HE+ ++HRD K N+L+ K+ DFGLA+ A N S+
Sbjct: 117 -----LLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLAR-AFGIPVNTFSS 167
Query: 263 RVMGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGR 301
V+ T Y AP+ M S D++S G +L E++TG+
Sbjct: 168 EVV-TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 106/219 (48%), Gaps = 31/219 (14%)
Query: 105 LGEGGFGRVF----KGVLSDG----TAVAIKRLTCGGQQGD-KEFLVEVEMLSRL-HHRN 154
LGEG FG+V G+ D T VA+K L + D + + E+EM+ + H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 155 LVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHG--PLGVN-CH---------LDWETRM 202
++ L+G ++D +++ E G+L +L P G+ C+ L + +
Sbjct: 81 IINLLGA-CTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 138
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
A ARG+ YL S+ C IHRD A N+L+ + K+ADFGLA+ +Y
Sbjct: 139 SCAYQVARGMEYLA--SKKC-IHRDLAARNVLVTEDNVMKIADFGLARDI--HHIDYYKK 193
Query: 263 RVMGTF--GYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
G ++APE +SDV+S+GV+L E+ T
Sbjct: 194 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 127/281 (45%), Gaps = 40/281 (14%)
Query: 105 LGEGGFGRVFKGVLSDGT-AVAIKRLTCGGQQGDKEFLV-EVEMLSRLHHRNLVKLVGYY 162
+G+G FG V+KG+ + VAIK + + + E + E+ +LS+ + + G Y
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 163 SSRDSSQHLLCYELVPNGSLESWLH-GPLGVNCHLDWETRMKIAL-DAARGLAYLHEDSQ 220
S++ + E + GS L GPL ET + L + +GL YLH + +
Sbjct: 87 LK--STKLWIIMEYLGGGSALDLLKPGPLE-------ETYIATILREILKGLDYLHSERK 137
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGH 280
IHRD KA+N+LL K+ADFG+A Q + T +GT ++APE
Sbjct: 138 ---IHRDIKAANVLLSEQGDVKLADFGVAGQLTD--TQIKRNXFVGTPFWMAPEVIKQSA 192
Query: 281 LLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRLEELADPRLGGK 340
K+D++S G+ +EL G P P L+ P P L G+
Sbjct: 193 YDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSP-------------PTLEGQ 239
Query: 341 Y--PKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMVQR 379
+ P ++F+ AC+ + RPT E+++ K + R
Sbjct: 240 HSKPFKEFVE------ACLNKDPRFRPTAKELLKH-KFITR 273
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 103/233 (44%), Gaps = 20/233 (8%)
Query: 76 GSLPHPTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQ 134
GS PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 1 GSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 135 Q--GDKEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGP 189
K E+ +L + H N++ L+ ++ S + LV + L + +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQ 120
Query: 190 LGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLA 249
+ H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGL
Sbjct: 121 KLTDDHVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLC 172
Query: 250 KQAPEGRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
+ + T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 173 RHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 38/240 (15%)
Query: 97 NNFEPASILGEGGFGRVFKGVLS-DGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNL 155
++FE ++LG+G FG+V K + D AIK++ ++ L EV +L+ L+H+ +
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLNHQYV 64
Query: 156 VKLVGYYSSR-----------DSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKI 204
V+ + R S + E N +L +H N + + ++
Sbjct: 65 VRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSE---NLNQQRDEYWRL 121
Query: 205 ALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAK-------------Q 251
L+Y+H +IHRD K NI ++ + + K+ DFGLAK Q
Sbjct: 122 FRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 252 APEGRTNYLSTRVMGTFGYVAPEYAM-TGHLLVKSDVYSYGVVLLELL----TGRKPVDM 306
G ++ L T +GT YVA E TGH K D+YS G++ E++ TG + V++
Sbjct: 179 NLPGSSDNL-TSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNI 237
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 7/205 (3%)
Query: 98 NFEPASILGEGGFGRVFK-GVLSDGTAVAIKRLTCGGQ-QGDKEFLV-EVEMLSRLHHRN 154
++E +G G +GR K SDG + K L G + +K+ LV EV +L L H N
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 66
Query: 155 LVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAY 214
+V+ R ++ + E G L S + +LD E +++ L
Sbjct: 67 IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 126
Query: 215 LHE--DSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVA 272
H D V+HRD K +N+ L+ + K+ DFGLA+ + + +GT Y++
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS--FAKAFVGTPYYMS 184
Query: 273 PEYAMTGHLLVKSDVYSYGVVLLEL 297
PE KSD++S G +L EL
Sbjct: 185 PEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 97/207 (46%), Gaps = 20/207 (9%)
Query: 105 LGEGGFGRVFKGVL----SDGTAVAIKRLTCGGQQGD---KEFLVEVEMLSRLHHRNLVK 157
+GEG FG V +G+ + AVAIK TC D ++FL E + + H ++VK
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIK--TCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHE 217
L+G + + + EL G L S+L LD + + A + LAYL
Sbjct: 76 LIGVITE---NPVWIIMELCTLGELRSFLQVR---KFSLDLASLILYAYQLSTALAYLES 129
Query: 218 DSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAM 277
+HRD A N+L+ +N K+ DFGL++ E T +++ ++APE
Sbjct: 130 KR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTXXKASKGKLPIKWMAPESIN 185
Query: 278 TGHLLVKSDVYSYGVVLLELLT-GRKP 303
SDV+ +GV + E+L G KP
Sbjct: 186 FRRFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 107/221 (48%), Gaps = 23/221 (10%)
Query: 95 ATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTC-GGQQGDKEFLV-EVEMLSRLH 151
AT+ +EP + +G G +G V+K G VA+K + G++G V EV +L RL
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 152 ---HRNLVKLVGYYSSRDSSQHL---LCYELVPNGSLESWLHG--PLGVNCHLDWETRMK 203
H N+V+L+ ++ + + + L +E V + L ++L P G L ET
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPG----LPAETIKD 116
Query: 204 IALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTR 263
+ RGL +LH + C++HRD K NIL+ + K+ADFGLA+
Sbjct: 117 LMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALAP 170
Query: 264 VMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPV 304
V+ T Y APE + D++S G + E+ RKP+
Sbjct: 171 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 108/221 (48%), Gaps = 23/221 (10%)
Query: 95 ATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTC-GGQQGDKEFLV-EVEMLSRLH 151
AT+ +EP + +G G +G V+K G VA+K + G++G V EV +L RL
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 152 ---HRNLVKLVGYYSSRDSSQHL---LCYELVPNGSLESWLHG--PLGVNCHLDWETRMK 203
H N+V+L+ ++ + + + L +E V + L ++L P G L ET
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPG----LPAETIKD 116
Query: 204 IALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTR 263
+ RGL +LH + C++HRD K NIL+ + K+ADFGLA+ +
Sbjct: 117 LMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALF---P 170
Query: 264 VMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPV 304
V+ T Y APE + D++S G + E+ RKP+
Sbjct: 171 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDD 125
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGLA+ +
Sbjct: 126 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDD 177
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 178 EMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 11 PTFYRQELNKTIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 70
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 71 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 130
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGLA+ +
Sbjct: 131 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDD 182
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 183 EMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 103/217 (47%), Gaps = 27/217 (12%)
Query: 105 LGEGGFGRVF----KGVLSDG----TAVAIKRLTCGGQQGD-KEFLVEVEMLSRL-HHRN 154
LGEG FG+V G+ D T VA+K L + D + + E+EM+ + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 155 LVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHG--PLGVNC----------HLDWETRM 202
++ L+G ++D +++ E G+L +L P G+ L + +
Sbjct: 96 IINLLGA-CTQDGPLYVIV-EYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLV 153
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
A ARG+ YL S+ C IHRD A N+L+ + K+ADFGLA+ +T
Sbjct: 154 SCAYQVARGMEYLA--SKKC-IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTT 210
Query: 263 RVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
++APE +SDV+S+GV+L E+ T
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 106/219 (48%), Gaps = 31/219 (14%)
Query: 105 LGEGGFGRVF----KGVLSDG----TAVAIKRLTCGGQQGD-KEFLVEVEMLSRL-HHRN 154
LGEG FG+V G+ D T VA+K L + D + + E+EM+ + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 155 LVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHG--PLGVN-CH---------LDWETRM 202
++ L+G ++D +++ E G+L +L P G+ C+ L + +
Sbjct: 96 IINLLGA-CTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 153
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
A ARG+ YL S+ C IHRD A N+L+ + K+ADFGLA+ +Y
Sbjct: 154 SCAYQVARGMEYLA--SKKC-IHRDLAARNVLVTEDNVMKIADFGLARDI--HHIDYYKK 208
Query: 263 RVMGTF--GYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
G ++APE +SDV+S+GV+L E+ T
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGLA+ +
Sbjct: 126 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 178 EMTGYVATR-----WYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 19/207 (9%)
Query: 105 LGEGGFGRVFKGVLS-----DGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLV 159
LG G FG V KG AV I + E L E ++ +L + +V+++
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 160 GYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDS 219
G ++ +L E+ G L +L N H+ + +++ + G+ YL E +
Sbjct: 437 GIC---EAESWMLVMEMAELGPLNKYLQ----QNRHVKDKNIIELVHQVSMGMKYLEESN 489
Query: 220 QPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAM 277
+HRD A N+LL +AK++DFGL+K A NY + G + + APE
Sbjct: 490 ---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECIN 545
Query: 278 TGHLLVKSDVYSYGVVLLELLT-GRKP 303
KSDV+S+GV++ E + G+KP
Sbjct: 546 YYKFSSKSDVWSFGVLMWEAFSYGQKP 572
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 107/221 (48%), Gaps = 23/221 (10%)
Query: 95 ATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTC-GGQQGDKEFLV-EVEMLSRLH 151
AT+ +EP + +G G +G V+K G VA+K + G++G V EV +L RL
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 152 ---HRNLVKLVGYYSSRDSSQHL---LCYELVPNGSLESWLHG--PLGVNCHLDWETRMK 203
H N+V+L+ ++ + + + L +E V + L ++L P G L ET
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPG----LPAETIKD 116
Query: 204 IALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTR 263
+ RGL +LH + C++HRD K NIL+ + K+ADFGLA+
Sbjct: 117 LMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALDP 170
Query: 264 VMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPV 304
V+ T Y APE + D++S G + E+ RKP+
Sbjct: 171 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 104/224 (46%), Gaps = 20/224 (8%)
Query: 96 TNNFEPASILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLV----EVEMLSRL 150
++ +E ILG GG V L VA+K L + D F + E + + L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLAR-DPSFYLRFRREAQNAAAL 69
Query: 151 HHRNLVKLVGYYSSRDSSQHL--LCYELVPNGSLESWLH--GPLGVNCHLDWETRMKIAL 206
+H +V + + + L + E V +L +H GP+ + +++
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM------TPKRAIEVIA 123
Query: 207 DAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQ-APEGRTNYLSTRVM 265
DA + L + H++ +IHRD K +NI++ KV DFG+A+ A G + + V+
Sbjct: 124 DACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 266 GTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
GT Y++PE A + +SDVYS G VL E+LTG P P
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 99/219 (45%), Gaps = 31/219 (14%)
Query: 105 LGEGGFGRVF--------KGVLSDGTAVAIKRLTCGGQQGDKEFLV-EVEMLSRL-HHRN 154
LGEG FG+V K + VA+K L + D LV E+EM+ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 155 LVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHG--PLGVNCHLD----------WETRM 202
++ L+G + ++ Y G+L +L P G+ D ++ +
Sbjct: 103 IINLLGACTQDGPLYVIVGY--ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
ARG+ YL SQ C IHRD A N+L+ N K+ADFGLA+ +Y
Sbjct: 161 SCTYQLARGMEYLA--SQKC-IHRDLAARNVLVTENNVMKIADFGLARDI--NNIDYYKK 215
Query: 263 RVMGTF--GYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
G ++APE +SDV+S+GV++ E+ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 11 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 70
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 71 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 130
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGLA+ +
Sbjct: 131 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDD 182
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 183 EMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 19/207 (9%)
Query: 105 LGEGGFGRVFKGVLS-----DGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLV 159
LG G FG V KG AV I + E L E ++ +L + +V+++
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 160 GYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDS 219
G ++ +L E+ G L +L N H+ + +++ + G+ YL E +
Sbjct: 438 GIC---EAESWMLVMEMAELGPLNKYLQ----QNRHVKDKNIIELVHQVSMGMKYLEESN 490
Query: 220 QPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAM 277
+HRD A N+LL +AK++DFGL+K A NY + G + + APE
Sbjct: 491 ---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECIN 546
Query: 278 TGHLLVKSDVYSYGVVLLELLT-GRKP 303
KSDV+S+GV++ E + G+KP
Sbjct: 547 YYKFSSKSDVWSFGVLMWEAFSYGQKP 573
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 18 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHA 77
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 78 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 137
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGLA+ +
Sbjct: 138 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 189
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 190 EMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 95/207 (45%), Gaps = 20/207 (9%)
Query: 105 LGEGGFGRVFKGVL----SDGTAVAIKRLTCGGQQGD---KEFLVEVEMLSRLHHRNLVK 157
+GEG FG V +G+ + AVAIK TC D ++FL E + + H ++VK
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIK--TCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHE 217
L+G + + EL G L S+L LD + + A + LAYL
Sbjct: 76 LIGVITENPV---WIIMELCTLGELRSFLQVR---KFSLDLASLILYAYQLSTALAYLES 129
Query: 218 DSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAM 277
+HRD A N+L+ K+ DFGL++ E T Y +++ ++APE
Sbjct: 130 KR---FVHRDIAARNVLVSATDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESIN 185
Query: 278 TGHLLVKSDVYSYGVVLLELLT-GRKP 303
SDV+ +GV + E+L G KP
Sbjct: 186 FRRFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDD 125
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGLA+ +
Sbjct: 126 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 178 EMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 104/219 (47%), Gaps = 31/219 (14%)
Query: 105 LGEGGFGRVF----KGVLSDG----TAVAIKRLTCGGQQGD-KEFLVEVEMLSRL-HHRN 154
LGEG FG+V G+ D T VA+K L + D + + E+EM+ + H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 155 LVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHG--PLGVNC----------HLDWETRM 202
++ L+G ++D +++ E G+L +L P G+ L + +
Sbjct: 85 IINLLGA-CTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 142
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
A ARG+ YL S+ C IHRD A N+L+ + K+ADFGLA+ +Y
Sbjct: 143 SCAYQVARGMEYLA--SKKC-IHRDLAARNVLVTEDNVMKIADFGLARDI--HHIDYYKK 197
Query: 263 RVMGTF--GYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
G ++APE +SDV+S+GV+L E+ T
Sbjct: 198 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 125/277 (45%), Gaps = 36/277 (12%)
Query: 105 LGEGGFGRVFKGVLSDGT-AVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYS 163
LG G +G V++GV + VA+K L + + EFL E ++ + H NLV+L+G
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV-C 76
Query: 164 SRDSSQHLLCYELVPNGSLESWLHGPLGVNCH---LDWETRMKIALDAARGLAYLHEDSQ 220
+R+ +++ E + G+L +L C+ + + +A + + YL + +
Sbjct: 77 TREPPFYIIT-EFMTYGNLLDYLR-----ECNRQEVSAVVLLYMATQISSAMEYLEKKN- 129
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGH 280
IHRD A N L+ N KVADFGL++ G T + APE
Sbjct: 130 --FIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTFTAHAGAKFPIKWTAPESLAYNK 186
Query: 281 LLVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARPILRDKD-RLEELADPRLG 338
+KSDV+++GV+L E+ T G P PS L+ +KD R+E
Sbjct: 187 FSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELL--------EKDYRMER------- 231
Query: 339 GKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLK 375
P+ +V + AC + RP+ E+ Q+ +
Sbjct: 232 ---PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 265
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 115/230 (50%), Gaps = 32/230 (13%)
Query: 89 YEELKEATNNFEPASILGE-GGFGRVFKGVLSDGTAVAI-KRLTCGGQQGDKEFLVEVEM 146
YE + N + I+GE G FG+V+K + + +A K + ++ ++++VE+++
Sbjct: 1 YEHVTRDLNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDI 60
Query: 147 LSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESW---LHGPLGVNCHLDWETRMK 203
L+ H N+VKL+ + ++ L+ E G++++ L PL E++++
Sbjct: 61 LASCDHPNIVKLLDAFYYENNLWILI--EFCAGGAVDAVMLELERPLT-------ESQIQ 111
Query: 204 IA----LDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNY 259
+ LDA L YLH++ +IHRD KA NIL + K+ADFG++ A RT
Sbjct: 112 VVCKQTLDA---LNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVS--AKNTRTXI 163
Query: 260 L-STRVMGTFGYVAPEYAMTGH-----LLVKSDVYSYGVVLLELLTGRKP 303
+GT ++APE M K+DV+S G+ L+E+ P
Sbjct: 164 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 13 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 72
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 73 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 132
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGLA+ +
Sbjct: 133 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTAD 184
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 185 EMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 127/281 (45%), Gaps = 40/281 (14%)
Query: 105 LGEGGFGRVFKGVLSDGT-AVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYS 163
LG G +G V++GV + VA+K L + + EFL E ++ + H NLV+L+G
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV-C 282
Query: 164 SRDSSQHLLCYELVPNGSLESWLHGPLGVNCH---LDWETRMKIALDAARGLAYLHEDSQ 220
+R+ +++ E + G+L +L C+ ++ + +A + + YL + +
Sbjct: 283 TREPPFYIIT-EFMTYGNLLDYLR-----ECNRQEVNAVVLLYMATQISSAMEYLEKKN- 335
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGH 280
IHR+ A N L+ N KVADFGL++ G T + APE
Sbjct: 336 --FIHRNLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 392
Query: 281 LLVKSDVYSYGVVLLELLT-GRKP---VDMSQPSGQENLVTWARPILRDKDRLEELADPR 336
+KSDV+++GV+L E+ T G P +D+SQ +L R+E
Sbjct: 393 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ----------VYELLEKDYRMER----- 437
Query: 337 LGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMV 377
P+ +V + AC + RP+ E+ Q+ + +
Sbjct: 438 -----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 473
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 104/219 (47%), Gaps = 31/219 (14%)
Query: 105 LGEGGFGRVF----KGVLSDG----TAVAIKRLTCGGQQGD-KEFLVEVEMLSRL-HHRN 154
LGEG FG+V G+ D T VA+K L + D + + E+EM+ + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 155 LVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHG--PLGVNC----------HLDWETRM 202
++ L+G ++D +++ E G+L +L P G+ L + +
Sbjct: 96 IINLLGA-CTQDGPLYVIV-EYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
A ARG+ YL S+ C IHRD A N+L+ + K+ADFGLA+ +Y
Sbjct: 154 SCAYQVARGMEYLA--SKKC-IHRDLAARNVLVTEDNVMKIADFGLARDI--HHIDYYKK 208
Query: 263 RVMGTF--GYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
G ++APE +SDV+S+GV+L E+ T
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 13 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 72
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 73 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 132
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGLA+ +
Sbjct: 133 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTAD 184
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 185 EMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 127/281 (45%), Gaps = 40/281 (14%)
Query: 105 LGEGGFGRVFKGVLSDGT-AVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYS 163
LG G +G V++GV + VA+K L + + EFL E ++ + H NLV+L+G
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV-C 324
Query: 164 SRDSSQHLLCYELVPNGSLESWLHGPLGVNCH---LDWETRMKIALDAARGLAYLHEDSQ 220
+R+ +++ E + G+L +L C+ ++ + +A + + YL + +
Sbjct: 325 TREPPFYIIT-EFMTYGNLLDYLR-----ECNRQEVNAVVLLYMATQISSAMEYLEKKN- 377
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGH 280
IHR+ A N L+ N KVADFGL++ G T + APE
Sbjct: 378 --FIHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNK 434
Query: 281 LLVKSDVYSYGVVLLELLT-GRKP---VDMSQPSGQENLVTWARPILRDKDRLEELADPR 336
+KSDV+++GV+L E+ T G P +D+SQ +L R+E
Sbjct: 435 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ----------VYELLEKDYRMER----- 479
Query: 337 LGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMV 377
P+ +V + AC + RP+ E+ Q+ + +
Sbjct: 480 -----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 515
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 95/203 (46%), Gaps = 10/203 (4%)
Query: 103 SILGEGGFGRVFKGVLS-DGTAVAIKRLTCGGQQG-DKEFLVEVEMLSRLHHRNLVKLVG 160
S +GEG +G V + + VAIK+++ Q + L E+++L R H N++ +
Sbjct: 33 SYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGIND 92
Query: 161 YYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQ 220
+ Q Y + +E+ L+ L HL + RGL Y+H +
Sbjct: 93 IIRAPTIEQMKDVY--IVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSAN- 148
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQA-PEGRTNYLSTRVMGTFGYVAPEYAMTG 279
V+HRD K SN+LL K+ DFGLA+ A P+ T + T Y APE +
Sbjct: 149 --VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 280 HLLVKS-DVYSYGVVLLELLTGR 301
KS D++S G +L E+L+ R
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGLA+ +
Sbjct: 126 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 178 EMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 104/219 (47%), Gaps = 31/219 (14%)
Query: 105 LGEGGFGRVF----KGVLSDG----TAVAIKRLTCGGQQGD-KEFLVEVEMLSRL-HHRN 154
LGEG FG+V G+ D T VA+K L + D + + E+EM+ + H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 155 LVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHG--PLGVNC----------HLDWETRM 202
++ L+G ++D +++ E G+L +L P G+ L + +
Sbjct: 89 IINLLGA-CTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 146
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
A ARG+ YL S+ C IHRD A N+L+ + K+ADFGLA+ +Y
Sbjct: 147 SCAYQVARGMEYLA--SKKC-IHRDLAARNVLVTEDNVMKIADFGLARDI--HHIDYYKK 201
Query: 263 RVMGTF--GYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
G ++APE +SDV+S+GV+L E+ T
Sbjct: 202 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGLA+ +
Sbjct: 126 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 178 EMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 104/219 (47%), Gaps = 31/219 (14%)
Query: 105 LGEGGFGRVF----KGVLSDG----TAVAIKRLTCGGQQGD-KEFLVEVEMLSRL-HHRN 154
LGEG FG+V G+ D T VA+K L + D + + E+EM+ + H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 155 LVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHG--PLGVNC----------HLDWETRM 202
++ L+G ++D +++ E G+L +L P G+ L + +
Sbjct: 88 IINLLGA-CTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 145
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
A ARG+ YL S+ C IHRD A N+L+ + K+ADFGLA+ +Y
Sbjct: 146 SCAYQVARGMEYLA--SKKC-IHRDLAARNVLVTEDNVMKIADFGLARDI--HHIDYYKK 200
Query: 263 RVMGTF--GYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
G ++APE +SDV+S+GV+L E+ T
Sbjct: 201 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 104/219 (47%), Gaps = 31/219 (14%)
Query: 105 LGEGGFGRVF----KGVLSDG----TAVAIKRLTCGGQQGD-KEFLVEVEMLSRL-HHRN 154
LGEG FG+V G+ D T VA+K L + D + + E+EM+ + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 155 LVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHG--PLGVNC----------HLDWETRM 202
++ L+G ++D +++ E G+L +L P G+ L + +
Sbjct: 96 IINLLGA-CTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
A ARG+ YL S+ C IHRD A N+L+ + K+ADFGLA+ +Y
Sbjct: 154 SCAYQVARGMEYLA--SKKC-IHRDLAARNVLVTEDNVMKIADFGLARDI--HHIDYYKK 208
Query: 263 RVMGTF--GYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
G ++APE +SDV+S+GV+L E+ T
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 126/281 (44%), Gaps = 40/281 (14%)
Query: 105 LGEGGFGRVFKGVLSDGT-AVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYS 163
LG G +G V++GV + VA+K L + + EFL E ++ + H NLV+L+G
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV-C 285
Query: 164 SRDSSQHLLCYELVPNGSLESWLHGPLGVNCH---LDWETRMKIALDAARGLAYLHEDSQ 220
+R+ +++ E + G+L +L C+ + + +A + + YL + +
Sbjct: 286 TREPPFYIIT-EFMTYGNLLDYLR-----ECNRQEVSAVVLLYMATQISSAMEYLEKKN- 338
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGH 280
IHR+ A N L+ N KVADFGL++ G T + APE
Sbjct: 339 --FIHRNLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 395
Query: 281 LLVKSDVYSYGVVLLELLT-GRKP---VDMSQPSGQENLVTWARPILRDKDRLEELADPR 336
+KSDV+++GV+L E+ T G P +D+SQ +L R+E
Sbjct: 396 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ----------VYELLEKDYRMER----- 440
Query: 337 LGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLKMV 377
P+ +V + AC + RP+ E+ Q+ + +
Sbjct: 441 -----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 476
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 19/207 (9%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDK-----EFLVEVEMLSRLHHRNLVKLV 159
LG G FG V KG V + + + E L E ++ +L + +V+++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 160 GYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDS 219
G ++ +L E+ G L +L N H+ + +++ + G+ YL E +
Sbjct: 95 G---ICEAESWMLVMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEESN 147
Query: 220 QPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAM 277
+HRD A N+LL +AK++DFGL+K A NY + G + + APE
Sbjct: 148 ---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECIN 203
Query: 278 TGHLLVKSDVYSYGVVLLELLT-GRKP 303
KSDV+S+GV++ E + G+KP
Sbjct: 204 YYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 95/203 (46%), Gaps = 10/203 (4%)
Query: 103 SILGEGGFGRVFKGVLS-DGTAVAIKRLTCGGQQGD-KEFLVEVEMLSRLHHRNLVKLVG 160
S +GEG +G V + + VAIK+++ Q + L E+++L R H N++ +
Sbjct: 29 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 161 YYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQ 220
+ Q Y + +E+ L+ L HL + RGL Y+H +
Sbjct: 89 IIRAPTIEQMKDVY--IVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSAN- 144
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQA-PEGRTNYLSTRVMGTFGYVAPEYAMTG 279
V+HRD K SN+LL K+ DFGLA+ A P+ T + T Y APE +
Sbjct: 145 --VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 280 HLLVKS-DVYSYGVVLLELLTGR 301
KS D++S G +L E+L+ R
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 19/207 (9%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDK-----EFLVEVEMLSRLHHRNLVKLV 159
LG G FG V KG V + + + E L E ++ +L + +V+++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 160 GYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDS 219
G ++ +L E+ G L +L N H+ + +++ + G+ YL E +
Sbjct: 95 G---ICEAESWMLVMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEESN 147
Query: 220 QPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAM 277
+HRD A N+LL +AK++DFGL+K A NY + G + + APE
Sbjct: 148 ---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECIN 203
Query: 278 TGHLLVKSDVYSYGVVLLELLT-GRKP 303
KSDV+S+GV++ E + G+KP
Sbjct: 204 YYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 113/229 (49%), Gaps = 44/229 (19%)
Query: 96 TNNFEPASILGEGGFGRVF---KGVLSDGTAVAIKRLTCGGQQGDKEFLV-EVEMLSRLH 151
++ ++ +LG+G FG V + AV + Q+ DKE L+ EV++L +L
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 90
Query: 152 HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIA-LDAAR 210
H N++KL ++ D L E+ G L + +R + + +DAAR
Sbjct: 91 HPNIMKLYEFFE--DKGYFYLVGEVYTGGELFDEII------------SRKRFSEVDAAR 136
Query: 211 -------GLAYLHEDSQPCVIHRDFKASNILLEN---NFHAKVADFGLAKQAPEGRTNYL 260
G+ Y+H++ ++HRD K N+LLE+ + + ++ DFGL+ T++
Sbjct: 137 IIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFE 186
Query: 261 STRVM----GTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 305
+++ M GT Y+APE + G K DV+S GV+L LL+G P +
Sbjct: 187 ASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFN 234
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 8 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 67
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 68 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 127
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGLA+ +
Sbjct: 128 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 179
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 180 EMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGLA+ +
Sbjct: 126 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 178 EMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 8 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 67
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 68 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 127
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGLA+ +
Sbjct: 128 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 179
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 180 EMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 18 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 77
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 78 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 137
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGLA+ +
Sbjct: 138 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 189
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 190 EMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 18 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 77
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 78 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 137
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGLA+ +
Sbjct: 138 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 189
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 190 EMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 112/251 (44%), Gaps = 37/251 (14%)
Query: 76 GSLPHPTSTRFLA----YEELKEATNNF---------EPASILGEGGFGRVFKGVL---- 118
G LP P +F A YEE A +F I+G G G V G L
Sbjct: 18 GKLPEP---QFYAEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPG 74
Query: 119 SDGTAVAIKRLTCG-GQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELV 177
VAIK L G ++ ++FL E ++ + H N+++L G + ++ E +
Sbjct: 75 QRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTR--GRLAMIVTEYM 132
Query: 178 PNGSLESWLHGPLGVNCHLDWETRMKIA---LDAARGLAYLHEDSQPCVIHRDFKASNIL 234
NGSL+++L H T M++ G+ YL S +HRD A N+L
Sbjct: 133 ENGSLDTFL------RTHDGQFTIMQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVL 183
Query: 235 LENNFHAKVADFGLAKQAPEG-RTNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVV 293
+++N KV+DFGL++ + Y +T + APE SDV+S+GVV
Sbjct: 184 VDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVV 243
Query: 294 LLELLT-GRKP 303
+ E+L G +P
Sbjct: 244 MWEVLAYGERP 254
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 13 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 72
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 73 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 132
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGLA+ +
Sbjct: 133 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTAD 184
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 185 EMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 2 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 61
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 62 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 121
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGLA+ +
Sbjct: 122 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 173
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 174 EMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 3 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 62
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 63 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 122
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGLA+ +
Sbjct: 123 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 174
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 175 EMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGLA+ +
Sbjct: 126 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 178 EMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 105/224 (46%), Gaps = 26/224 (11%)
Query: 95 ATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQGDKEFLV-----EVEMLS 148
AT+ +EP + +G G +G V+K G VA+K + G L EV +L
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 149 RLH---HRNLVKLVGYYSSRDSSQHL---LCYELVPNGSLESWLHG--PLGVNCHLDWET 200
RL H N+V+L+ ++ + + + L +E V + L ++L P G L ET
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPG----LPAET 121
Query: 201 RMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYL 260
+ RGL +LH + C++HRD K NIL+ + K+ADFGLA+
Sbjct: 122 IKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMA 175
Query: 261 STRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPV 304
T V+ T Y APE + D++S G + E+ RKP+
Sbjct: 176 LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 218
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 11 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 70
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 71 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 130
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGLA+ +
Sbjct: 131 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 182
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 183 EMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 3 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 62
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 63 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 122
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGLA+ +
Sbjct: 123 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 174
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 175 EMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGLA+ +
Sbjct: 126 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 178 EMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 5 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 64
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 65 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 124
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGLA+ +
Sbjct: 125 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 176
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 177 EMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 4 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 63
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 64 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 123
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGLA+ +
Sbjct: 124 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 175
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 176 EMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGLA+ +
Sbjct: 126 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 178 EMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 113/229 (49%), Gaps = 44/229 (19%)
Query: 96 TNNFEPASILGEGGFGRVF---KGVLSDGTAVAIKRLTCGGQQGDKEFLV-EVEMLSRLH 151
++ ++ +LG+G FG V + AV + Q+ DKE L+ EV++L +L
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 152 HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIA-LDAAR 210
H N++KL ++ D L E+ G L + +R + + +DAAR
Sbjct: 85 HPNIMKLYEFF--EDKGYFYLVGEVYTGGELFDEII------------SRKRFSEVDAAR 130
Query: 211 -------GLAYLHEDSQPCVIHRDFKASNILLEN---NFHAKVADFGLAKQAPEGRTNYL 260
G+ Y+H++ ++HRD K N+LLE+ + + ++ DFGL+ T++
Sbjct: 131 IIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFE 180
Query: 261 STRVM----GTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 305
+++ M GT Y+APE + G K DV+S GV+L LL+G P +
Sbjct: 181 ASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFN 228
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 113/229 (49%), Gaps = 44/229 (19%)
Query: 96 TNNFEPASILGEGGFGRVF---KGVLSDGTAVAIKRLTCGGQQGDKEFLV-EVEMLSRLH 151
++ ++ +LG+G FG V + AV + Q+ DKE L+ EV++L +L
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 107
Query: 152 HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIA-LDAAR 210
H N++KL ++ D L E+ G L + +R + + +DAAR
Sbjct: 108 HPNIMKLYEFF--EDKGYFYLVGEVYTGGELFDEII------------SRKRFSEVDAAR 153
Query: 211 -------GLAYLHEDSQPCVIHRDFKASNILLEN---NFHAKVADFGLAKQAPEGRTNYL 260
G+ Y+H++ ++HRD K N+LLE+ + + ++ DFGL+ T++
Sbjct: 154 IIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFE 203
Query: 261 STRVM----GTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 305
+++ M GT Y+APE + G K DV+S GV+L LL+G P +
Sbjct: 204 ASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFN 251
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 11 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 70
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 71 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 130
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGLA+ +
Sbjct: 131 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 182
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 183 EMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 99/209 (47%), Gaps = 26/209 (12%)
Query: 105 LGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEF---LVEVEMLSRLHHRNLVKLVG 160
+G G FG V F + + VAIK+++ G+Q ++++ + EV L +L H N ++ G
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 161 YYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMK-IALDAARGLAYLHEDS 219
Y ++ ++ Y L L PL E + + A +GLAYLH +
Sbjct: 122 CYLREHTAWLVMEYCLGSASDLLEVHKKPLQ-------EVEIAAVTHGALQGLAYLHSHN 174
Query: 220 QPCVIHRDFKASNILLENNFHAKVADFGLAK-QAPEGRTNYLSTRVMGTFGYVAPEYAMT 278
+IHRD KA NILL K+ DFG A AP + +GT ++APE +
Sbjct: 175 ---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-------ANXFVGTPYWMAPEVILA 224
Query: 279 ---GHLLVKSDVYSYGVVLLELLTGRKPV 304
G K DV+S G+ +EL + P+
Sbjct: 225 MDEGQYDGKVDVWSLGITCIELAERKPPL 253
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 65
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGLA+ +
Sbjct: 126 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 178 EMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 26 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 85
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 86 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 145
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGLA+ +
Sbjct: 146 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 197
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 198 EMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 25 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 84
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 85 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 144
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGLA+ +
Sbjct: 145 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 196
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 197 EMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 8 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 67
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 68 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 127
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGLA+ +
Sbjct: 128 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 179
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 180 EMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 29 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 88
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 89 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 148
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGLA+ +
Sbjct: 149 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 200
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 201 EMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 95/207 (45%), Gaps = 20/207 (9%)
Query: 105 LGEGGFGRVFKGVL----SDGTAVAIKRLTCGGQQGD---KEFLVEVEMLSRLHHRNLVK 157
+GEG FG V +G+ + AVAIK TC D ++FL E + + H ++VK
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIK--TCKNCTSDSVREKFLQEALTMRQFDHPHIVK 455
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHE 217
L+G + + EL G L S+L LD + + A + LAYL
Sbjct: 456 LIGVITENPV---WIIMELCTLGELRSFLQVR---KFSLDLASLILYAYQLSTALAYLES 509
Query: 218 DSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAM 277
+HRD A N+L+ K+ DFGL++ E T Y +++ ++APE
Sbjct: 510 KR---FVHRDIAARNVLVSATDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESIN 565
Query: 278 TGHLLVKSDVYSYGVVLLELLT-GRKP 303
SDV+ +GV + E+L G KP
Sbjct: 566 FRRFTSASDVWMFGVCMWEILMHGVKP 592
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 13 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 72
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 73 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 132
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGLA+ +
Sbjct: 133 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 184
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 185 EMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 113/229 (49%), Gaps = 44/229 (19%)
Query: 96 TNNFEPASILGEGGFGRVF---KGVLSDGTAVAIKRLTCGGQQGDKEFLV-EVEMLSRLH 151
++ ++ +LG+G FG V + AV + Q+ DKE L+ EV++L +L
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 108
Query: 152 HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIA-LDAAR 210
H N++KL ++ D L E+ G L + +R + + +DAAR
Sbjct: 109 HPNIMKLYEFF--EDKGYFYLVGEVYTGGELFDEII------------SRKRFSEVDAAR 154
Query: 211 -------GLAYLHEDSQPCVIHRDFKASNILLEN---NFHAKVADFGLAKQAPEGRTNYL 260
G+ Y+H++ ++HRD K N+LLE+ + + ++ DFGL+ T++
Sbjct: 155 IIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFE 204
Query: 261 STRVM----GTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 305
+++ M GT Y+APE + G K DV+S GV+L LL+G P +
Sbjct: 205 ASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFN 252
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 12 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 71
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 72 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 131
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGLA+ +
Sbjct: 132 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 183
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 184 EMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 104/224 (46%), Gaps = 20/224 (8%)
Query: 96 TNNFEPASILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLV----EVEMLSRL 150
++ +E ILG GG V L VA+K L + D F + E + + L
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLAR-DPSFYLRFRREAQNAAAL 86
Query: 151 HHRNLVKLVGYYSSRDSSQHL--LCYELVPNGSLESWLH--GPLGVNCHLDWETRMKIAL 206
+H +V + + + L + E V +L +H GP+ + +++
Sbjct: 87 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM------TPKRAIEVIA 140
Query: 207 DAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQ-APEGRTNYLSTRVM 265
DA + L + H++ +IHRD K +NI++ KV DFG+A+ A G + + V+
Sbjct: 141 DACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 197
Query: 266 GTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
GT Y++PE A + +SDVYS G VL E+LTG P P
Sbjct: 198 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 241
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 111/249 (44%), Gaps = 19/249 (7%)
Query: 90 EELKEATNNFEPASILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGD-KEFLVEVEML 147
++ E +E +G GGF +V + G VAIK + D E+E L
Sbjct: 3 KDYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEAL 62
Query: 148 SRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
L H+++ +L Y+ +++ + E P G L ++ ++ + ETR+ +
Sbjct: 63 KNLRHQHICQL--YHVLETANKIFMVLEYCPGGELFDYIISQDRLS---EEETRV-VFRQ 116
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
+AY+H HRD K N+L + K+ DFGL + P+G +Y G+
Sbjct: 117 IVSAVAYVHSQGYA---HRDLKPENLLFDEYHKLKLIDFGLCAK-PKGNKDYHLQTCCGS 172
Query: 268 FGYVAPEYAM-TGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDK 326
Y APE +L ++DV+S G++L L+ G P D +N++ + I+R K
Sbjct: 173 LAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFD------DDNVMALYKKIMRGK 226
Query: 327 DRLEELADP 335
+ + P
Sbjct: 227 YDVPKWLSP 235
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 20/216 (9%)
Query: 91 ELKEATNNFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKE-----FLVEV 144
++K +E LGEG F V+K + VAIK++ G + K+ L E+
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 145 EMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMK- 203
++L L H N++ L+ + + + + + +E+ L + N + + +K
Sbjct: 64 KLLQELSHPNIIGLLDAFGHKSNISLVFDF-------METDLEVIIKDNSLVLTPSHIKA 116
Query: 204 IALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTR 263
L +GL YLH Q ++HRD K +N+LL+ N K+ADFGLAK G N
Sbjct: 117 YMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSF--GSPNRAYXH 171
Query: 264 VMGTFGYVAPEYAMTGHLL-VKSDVYSYGVVLLELL 298
+ T Y APE + V D+++ G +L ELL
Sbjct: 172 QVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 95/203 (46%), Gaps = 10/203 (4%)
Query: 103 SILGEGGFGRVFKGVLS-DGTAVAIKRLTCGGQQGD-KEFLVEVEMLSRLHHRNLVKLVG 160
S +GEG +G V + + VAIK+++ Q + L E+++L R H N++ +
Sbjct: 29 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 161 YYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQ 220
+ Q Y + +E+ L+ L HL + RGL Y+H +
Sbjct: 89 IIRAPTIEQMKDVY--IVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSAN- 144
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQA-PEGRTNYLSTRVMGTFGYVAPEYAMTG 279
V+HRD K SN+LL K+ DFGLA+ A P+ T + T Y APE +
Sbjct: 145 --VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 280 HLLVKS-DVYSYGVVLLELLTGR 301
KS D++S G +L E+L+ R
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 8 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 67
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 68 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 127
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGLA+ +
Sbjct: 128 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLARHTDD 179
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 180 EMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 95/203 (46%), Gaps = 10/203 (4%)
Query: 103 SILGEGGFGRVFKGVLS-DGTAVAIKRLTCGGQQGD-KEFLVEVEMLSRLHHRNLVKLVG 160
S +GEG +G V + + VAIK+++ Q + L E+++L R H N++ +
Sbjct: 29 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 161 YYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQ 220
+ Q Y + +E+ L+ L HL + RGL Y+H +
Sbjct: 89 IIRAPTIEQMKDVY--IVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSAN- 144
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQA-PEGRTNYLSTRVMGTFGYVAPEYAMTG 279
V+HRD K SN+LL K+ DFGLA+ A P+ T + T Y APE +
Sbjct: 145 --VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 280 HLLVKS-DVYSYGVVLLELLTGR 301
KS D++S G +L E+L+ R
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 95/203 (46%), Gaps = 10/203 (4%)
Query: 103 SILGEGGFGRVFKGVLS-DGTAVAIKRLTCGGQQGD-KEFLVEVEMLSRLHHRNLVKLVG 160
S +GEG +G V + + VAIK+++ Q + L E+++L R H N++ +
Sbjct: 33 SYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 161 YYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQ 220
+ Q Y + +E+ L+ L HL + RGL Y+H +
Sbjct: 93 IIRAPTIEQMKDVY--IVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSAN- 148
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQA-PEGRTNYLSTRVMGTFGYVAPEYAMTG 279
V+HRD K SN+LL K+ DFGLA+ A P+ T + T Y APE +
Sbjct: 149 --VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 280 HLLVKS-DVYSYGVVLLELLTGR 301
KS D++S G +L E+L+ R
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 98/204 (48%), Gaps = 21/204 (10%)
Query: 105 LGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYS 163
+GEG G V G VA+K++ QQ + EV ++ HH N+V + Y
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 164 SRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCV 223
D + + E + G+L + + ++ E + L R L+YLH V
Sbjct: 113 VGD--ELWVVMEFLEGGALTD-----IVTHTRMNEEQIATVCLSVLRALSYLHNQG---V 162
Query: 224 IHRDFKASNILLENNFHAKVADFG----LAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTG 279
IHRD K+ +ILL ++ K++DFG ++K+ P+ + ++GT ++APE
Sbjct: 163 IHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKX------LVGTPYWMAPEVISRL 216
Query: 280 HLLVKSDVYSYGVVLLELLTGRKP 303
+ D++S G++++E++ G P
Sbjct: 217 PYGTEVDIWSLGIMVIEMIDGEPP 240
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 95/203 (46%), Gaps = 10/203 (4%)
Query: 103 SILGEGGFGRVFKGVLS-DGTAVAIKRLTCGGQQGD-KEFLVEVEMLSRLHHRNLVKLVG 160
S +GEG +G V + + VAIK+++ Q + L E+++L R H N++ +
Sbjct: 31 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 90
Query: 161 YYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQ 220
+ Q Y + +E+ L+ L HL + RGL Y+H +
Sbjct: 91 IIRAPTIEQMKDVY--IVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSAN- 146
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQA-PEGRTNYLSTRVMGTFGYVAPEYAMTG 279
V+HRD K SN+LL K+ DFGLA+ A P+ T + T Y APE +
Sbjct: 147 --VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 280 HLLVKS-DVYSYGVVLLELLTGR 301
KS D++S G +L E+L+ R
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 19/207 (9%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDK-----EFLVEVEMLSRLHHRNLVKLV 159
LG G FG V KG V + + + E L E ++ +L + +V+++
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 160 GYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDS 219
G ++ +L E+ G L +L N H+ + +++ + G+ YL E +
Sbjct: 93 G---ICEAESWMLVMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEESN 145
Query: 220 QPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAM 277
+HRD A N+LL +AK++DFGL+K A NY + G + + APE
Sbjct: 146 ---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECIN 201
Query: 278 TGHLLVKSDVYSYGVVLLELLT-GRKP 303
KSDV+S+GV++ E + G+KP
Sbjct: 202 YYKFSSKSDVWSFGVLMWEAFSYGQKP 228
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 95/203 (46%), Gaps = 10/203 (4%)
Query: 103 SILGEGGFGRVFKGVLS-DGTAVAIKRLTCGGQQGD-KEFLVEVEMLSRLHHRNLVKLVG 160
S +GEG +G V + + VAIK+++ Q + L E+++L R H N++ +
Sbjct: 29 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 161 YYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQ 220
+ Q Y + +E+ L+ L HL + RGL Y+H +
Sbjct: 89 IIRAPTIEQMKDVY--IVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSAN- 144
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQA-PEGRTNYLSTRVMGTFGYVAPEYAMTG 279
V+HRD K SN+LL K+ DFGLA+ A P+ T + T Y APE +
Sbjct: 145 --VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 280 HLLVKS-DVYSYGVVLLELLTGR 301
KS D++S G +L E+L+ R
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 12 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 71
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 72 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 131
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGLA+ +
Sbjct: 132 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLARHTDD 183
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 184 EMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 99/209 (47%), Gaps = 26/209 (12%)
Query: 105 LGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEF---LVEVEMLSRLHHRNLVKLVG 160
+G G FG V F + + VAIK+++ G+Q ++++ + EV L +L H N ++ G
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 161 YYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMK-IALDAARGLAYLHEDS 219
Y ++ ++ Y L L PL E + + A +GLAYLH +
Sbjct: 83 CYLREHTAWLVMEYCLGSASDLLEVHKKPLQ-------EVEIAAVTHGALQGLAYLHSHN 135
Query: 220 QPCVIHRDFKASNILLENNFHAKVADFGLAK-QAPEGRTNYLSTRVMGTFGYVAPEYAMT 278
+IHRD KA NILL K+ DFG A AP + +GT ++APE +
Sbjct: 136 ---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-------ANXFVGTPYWMAPEVILA 185
Query: 279 ---GHLLVKSDVYSYGVVLLELLTGRKPV 304
G K DV+S G+ +EL + P+
Sbjct: 186 MDEGQYDGKVDVWSLGITCIELAERKPPL 214
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 2 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 61
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 62 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 121
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGLA+ +
Sbjct: 122 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 173
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 174 EMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 2 PTFYRQELAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 61
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 62 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDD 121
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGLA+ +
Sbjct: 122 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 173
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 174 EMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 25 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 84
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 85 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 144
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGLA+ +
Sbjct: 145 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 196
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 197 EMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 101/212 (47%), Gaps = 20/212 (9%)
Query: 105 LGEGGFGRVFKGVLSDGT-AVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYS 163
LG G +G V+ GV + VA+K L + + EFL E ++ + H NLV+L+G +
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 164 SRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETR---MKIALDAARGLAYLHEDSQ 220
+ E +P G+L +L C+ + T + +A + + YL + +
Sbjct: 99 LE--PPFYIVTEYMPYGNLLDYLR-----ECNREEVTAVVLLYMATQISSAMEYLEKKN- 150
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGH 280
IHRD A N L+ N KVADFGL++ G T + APE
Sbjct: 151 --FIHRDLAARNCLVGENHVVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNT 207
Query: 281 LLVKSDVYSYGVVLLELLT-GRKP---VDMSQ 308
+KSDV+++GV+L E+ T G P +D+SQ
Sbjct: 208 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 239
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 95/203 (46%), Gaps = 10/203 (4%)
Query: 103 SILGEGGFGRVFKGVLS-DGTAVAIKRLTCGGQQGD-KEFLVEVEMLSRLHHRNLVKLVG 160
S +GEG +G V + + VAIK+++ Q + L E+++L R H N++ +
Sbjct: 37 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 96
Query: 161 YYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQ 220
+ Q Y + +E+ L+ L HL + RGL Y+H +
Sbjct: 97 IIRAPTIEQMKDVY--IVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSAN- 152
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQA-PEGRTNYLSTRVMGTFGYVAPEYAMTG 279
V+HRD K SN+LL K+ DFGLA+ A P+ T + T Y APE +
Sbjct: 153 --VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 210
Query: 280 HLLVKS-DVYSYGVVLLELLTGR 301
KS D++S G +L E+L+ R
Sbjct: 211 KGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 95/203 (46%), Gaps = 10/203 (4%)
Query: 103 SILGEGGFGRVFKGVLS-DGTAVAIKRLTCGGQQGD-KEFLVEVEMLSRLHHRNLVKLVG 160
S +GEG +G V + + VAIK+++ Q + L E+++L R H N++ +
Sbjct: 29 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 161 YYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQ 220
+ Q Y + +E+ L+ L HL + RGL Y+H +
Sbjct: 89 IIRAPTIEQMKDVY--IVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSAN- 144
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQA-PEGRTNYLSTRVMGTFGYVAPEYAMTG 279
V+HRD K SN+LL K+ DFGLA+ A P+ T + T Y APE +
Sbjct: 145 --VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 280 HLLVKS-DVYSYGVVLLELLTGR 301
KS D++S G +L E+L+ R
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 105/222 (47%), Gaps = 37/222 (16%)
Query: 105 LGEGGFGRVFKGVLSDG-----------TAVAIKRLTCGGQQGD-KEFLVEVEMLSRL-H 151
LGEG FG+V VL++ T VA+K L + D + + E+EM+ +
Sbjct: 77 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 133
Query: 152 HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHG--PLGVNC----------HLDWE 199
H+N++ L+G ++D +++ E G+L +L P G+ L +
Sbjct: 134 HKNIINLLGA-CTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 191
Query: 200 TRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNY 259
+ A ARG+ YL S+ C IHRD A N+L+ + K+ADFGLA+ +Y
Sbjct: 192 DLVSCAYQVARGMEYLA--SKKC-IHRDLAARNVLVTEDNVMKIADFGLARDI--HHIDY 246
Query: 260 LSTRVMGTF--GYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
G ++APE +SDV+S+GV+L E+ T
Sbjct: 247 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 95/203 (46%), Gaps = 10/203 (4%)
Query: 103 SILGEGGFGRVFKGVLS-DGTAVAIKRLTCGGQQGD-KEFLVEVEMLSRLHHRNLVKLVG 160
S +GEG +G V + + VAIK+++ Q + L E+++L R H N++ +
Sbjct: 27 SYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 86
Query: 161 YYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQ 220
+ Q Y + +E+ L+ L HL + RGL Y+H +
Sbjct: 87 IIRAPTIEQMKDVY--IVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSAN- 142
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQA-PEGRTNYLSTRVMGTFGYVAPEYAMTG 279
V+HRD K SN+LL K+ DFGLA+ A P+ T + T Y APE +
Sbjct: 143 --VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 200
Query: 280 HLLVKS-DVYSYGVVLLELLTGR 301
KS D++S G +L E+L+ R
Sbjct: 201 KGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 95/203 (46%), Gaps = 10/203 (4%)
Query: 103 SILGEGGFGRVFKGVLS-DGTAVAIKRLTCGGQQGD-KEFLVEVEMLSRLHHRNLVKLVG 160
S +GEG +G V + + VAIK+++ Q + L E+++L R H N++ +
Sbjct: 33 SYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 161 YYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQ 220
+ Q Y + +E+ L+ L HL + RGL Y+H +
Sbjct: 93 IIRAPTIEQMKDVY--IVQDLMETDLYKLLKCQ-HLSNDHICYFLYQILRGLKYIHSAN- 148
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQA-PEGRTNYLSTRVMGTFGYVAPEYAMTG 279
V+HRD K SN+LL K+ DFGLA+ A P+ T + T Y APE +
Sbjct: 149 --VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 280 HLLVKS-DVYSYGVVLLELLTGR 301
KS D++S G +L E+L+ R
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 95/203 (46%), Gaps = 10/203 (4%)
Query: 103 SILGEGGFGRVFKGVLS-DGTAVAIKRLTCGGQQGD-KEFLVEVEMLSRLHHRNLVKLVG 160
S +GEG +G V + + VAIK+++ Q + L E+++L R H N++ +
Sbjct: 34 SYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 93
Query: 161 YYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQ 220
+ Q Y + +E+ L+ L HL + RGL Y+H +
Sbjct: 94 IIRAPTIEQMKDVY--IVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSAN- 149
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQA-PEGRTNYLSTRVMGTFGYVAPEYAMTG 279
V+HRD K SN+LL K+ DFGLA+ A P+ T + T Y APE +
Sbjct: 150 --VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 207
Query: 280 HLLVKS-DVYSYGVVLLELLTGR 301
KS D++S G +L E+L+ R
Sbjct: 208 KGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 95/203 (46%), Gaps = 10/203 (4%)
Query: 103 SILGEGGFGRVFKGVLS-DGTAVAIKRLTCGGQQGD-KEFLVEVEMLSRLHHRNLVKLVG 160
S +GEG +G V + + VAIK+++ Q + L E+++L R H N++ +
Sbjct: 35 SYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 94
Query: 161 YYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQ 220
+ Q Y + +E+ L+ L HL + RGL Y+H +
Sbjct: 95 IIRAPTIEQMKDVY--IVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSAN- 150
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQA-PEGRTNYLSTRVMGTFGYVAPEYAMTG 279
V+HRD K SN+LL K+ DFGLA+ A P+ T + T Y APE +
Sbjct: 151 --VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 208
Query: 280 HLLVKS-DVYSYGVVLLELLTGR 301
KS D++S G +L E+L+ R
Sbjct: 209 KGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 95/203 (46%), Gaps = 10/203 (4%)
Query: 103 SILGEGGFGRVFKGVLS-DGTAVAIKRLTCGGQQGD-KEFLVEVEMLSRLHHRNLVKLVG 160
S +GEG +G V + + VAIK+++ Q + L E+++L R H N++ +
Sbjct: 26 SYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 85
Query: 161 YYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQ 220
+ Q Y + +E+ L+ L HL + RGL Y+H +
Sbjct: 86 IIRAPTIEQMKDVY--IVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSAN- 141
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQA-PEGRTNYLSTRVMGTFGYVAPEYAMTG 279
V+HRD K SN+LL K+ DFGLA+ A P+ T + T Y APE +
Sbjct: 142 --VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 199
Query: 280 HLLVKS-DVYSYGVVLLELLTGR 301
KS D++S G +L E+L+ R
Sbjct: 200 KGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 95/203 (46%), Gaps = 10/203 (4%)
Query: 103 SILGEGGFGRVFKGVLS-DGTAVAIKRLTCGGQQGD-KEFLVEVEMLSRLHHRNLVKLVG 160
S +GEG +G V + + VAIK+++ Q + L E+++L R H N++ +
Sbjct: 33 SYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 161 YYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQ 220
+ Q Y + +E+ L+ L HL + RGL Y+H +
Sbjct: 93 IIRAPTIEQMKDVY--IVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSAN- 148
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQA-PEGRTNYLSTRVMGTFGYVAPEYAMTG 279
V+HRD K SN+LL K+ DFGLA+ A P+ T + T Y APE +
Sbjct: 149 --VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 280 HLLVKS-DVYSYGVVLLELLTGR 301
KS D++S G +L E+L+ R
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 12 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 71
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 72 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 131
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGLA+ +
Sbjct: 132 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 183
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 184 EMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 19/207 (9%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDK-----EFLVEVEMLSRLHHRNLVKLV 159
LG G FG V KG V + + + E L E ++ +L + +V+++
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 160 GYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDS 219
G ++ +L E+ G L +L N H+ + +++ + G+ YL E +
Sbjct: 85 G---ICEAESWMLVMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEESN 137
Query: 220 QPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAM 277
+HRD A N+LL +AK++DFGL+K A NY + G + + APE
Sbjct: 138 ---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECIN 193
Query: 278 TGHLLVKSDVYSYGVVLLELLT-GRKP 303
KSDV+S+GV++ E + G+KP
Sbjct: 194 YYKFSSKSDVWSFGVLMWEAFSYGQKP 220
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 95/203 (46%), Gaps = 10/203 (4%)
Query: 103 SILGEGGFGRVFKGVLS-DGTAVAIKRLTCGGQQGD-KEFLVEVEMLSRLHHRNLVKLVG 160
S +GEG +G V + + VAIK+++ Q + L E+++L R H N++ +
Sbjct: 27 SYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 86
Query: 161 YYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQ 220
+ Q Y + +E+ L+ L HL + RGL Y+H +
Sbjct: 87 IIRAPTIEQMKDVY--IVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSAN- 142
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQA-PEGRTNYLSTRVMGTFGYVAPEYAMTG 279
V+HRD K SN+LL K+ DFGLA+ A P+ T + T Y APE +
Sbjct: 143 --VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 200
Query: 280 HLLVKS-DVYSYGVVLLELLTGR 301
KS D++S G +L E+L+ R
Sbjct: 201 KGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 26 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 85
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 86 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 145
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGLA+ +
Sbjct: 146 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 197
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 198 EMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 19/207 (9%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDK-----EFLVEVEMLSRLHHRNLVKLV 159
LG G FG V KG V + + + E L E ++ +L + +V+++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 160 GYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDS 219
G ++ +L E+ G L +L N H+ + +++ + G+ YL E +
Sbjct: 79 G---ICEAESWMLVMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEESN 131
Query: 220 QPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAM 277
+HRD A N+LL +AK++DFGL+K A NY + G + + APE
Sbjct: 132 ---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECIN 187
Query: 278 TGHLLVKSDVYSYGVVLLELLT-GRKP 303
KSDV+S+GV++ E + G+KP
Sbjct: 188 YYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 95/203 (46%), Gaps = 10/203 (4%)
Query: 103 SILGEGGFGRVFKGVLS-DGTAVAIKRLTCGGQQGD-KEFLVEVEMLSRLHHRNLVKLVG 160
S +GEG +G V + + VAIK+++ Q + L E+++L R H N++ +
Sbjct: 49 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 108
Query: 161 YYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQ 220
+ Q Y + +E+ L+ L HL + RGL Y+H +
Sbjct: 109 IIRAPTIEQMKDVY--IVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSAN- 164
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQA-PEGRTNYLSTRVMGTFGYVAPEYAMTG 279
V+HRD K SN+LL K+ DFGLA+ A P+ T + T Y APE +
Sbjct: 165 --VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 222
Query: 280 HLLVKS-DVYSYGVVLLELLTGR 301
KS D++S G +L E+L+ R
Sbjct: 223 KGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 12 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 71
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 72 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 131
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGLA+ +
Sbjct: 132 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 183
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 184 EMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 19/207 (9%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDK-----EFLVEVEMLSRLHHRNLVKLV 159
LG G FG V KG V + + + E L E ++ +L + +V+++
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 160 GYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDS 219
G ++ +L E+ G L +L N H+ + +++ + G+ YL E +
Sbjct: 73 G---ICEAESWMLVMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEESN 125
Query: 220 QPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAM 277
+HRD A N+LL +AK++DFGL+K A NY + G + + APE
Sbjct: 126 ---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECIN 181
Query: 278 TGHLLVKSDVYSYGVVLLELLT-GRKP 303
KSDV+S+GV++ E + G+KP
Sbjct: 182 YYKFSSKSDVWSFGVLMWEAFSYGQKP 208
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 19/207 (9%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDK-----EFLVEVEMLSRLHHRNLVKLV 159
LG G FG V KG V + + + E L E ++ +L + +V+++
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 160 GYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDS 219
G ++ +L E+ G L +L N H+ + +++ + G+ YL E +
Sbjct: 75 G---ICEAESWMLVMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEESN 127
Query: 220 QPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAM 277
+HRD A N+LL +AK++DFGL+K A NY + G + + APE
Sbjct: 128 ---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECIN 183
Query: 278 TGHLLVKSDVYSYGVVLLELLT-GRKP 303
KSDV+S+GV++ E + G+KP
Sbjct: 184 YYKFSSKSDVWSFGVLMWEAFSYGQKP 210
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 112/253 (44%), Gaps = 41/253 (16%)
Query: 76 GSLPHPTSTRFLA----YEELKEATNNF---------EPASILGEGGFGRVFKGVL---- 118
G LP P +F A YEE A +F I+G G G V G L
Sbjct: 18 GKLPEP---QFYAEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPG 74
Query: 119 SDGTAVAIKRLTCG-GQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELV 177
VAIK L G ++ ++FL E ++ + H N+++L G + ++ E +
Sbjct: 75 QRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTR--GRLAMIVTEYM 132
Query: 178 PNGSLESWLHGPLGVNCHLDWETRMKIA---LDAARGLAYLHEDSQPCVIHRDFKASNIL 234
NGSL+++L H T M++ G+ YL S +HRD A N+L
Sbjct: 133 ENGSLDTFL------RTHDGQFTIMQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVL 183
Query: 235 LENNFHAKVADFGLAK---QAPEGRTNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYG 291
+++N KV+DFGL++ P+ ++ + APE SDV+S+G
Sbjct: 184 VDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKI--PIRWTAPEAIAFRTFSSASDVWSFG 241
Query: 292 VVLLELLT-GRKP 303
VV+ E+L G +P
Sbjct: 242 VVMWEVLAYGERP 254
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 95/230 (41%), Gaps = 34/230 (14%)
Query: 98 NFEPASILGEGGFGRV---FKGVLSDGTAVAI---KRLTCGGQQGDKEFLVEVEMLSRLH 151
+++ LGEG +G V V + AV I KR + KE + L+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN----KMLN 62
Query: 152 HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR- 210
H N+VK G+ R+ + L E G L + +G+ DA R
Sbjct: 63 HENVVKFYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMP-----------EPDAQRF 109
Query: 211 ------GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRV 264
G+ YLH + HRD K N+LL+ + K++DFGLA L ++
Sbjct: 110 FHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 265 MGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKPVDMSQPSGQE 313
GT YVAPE + DV+S G+VL +L G P D S QE
Sbjct: 167 XGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQE 216
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 95/230 (41%), Gaps = 34/230 (14%)
Query: 98 NFEPASILGEGGFGRV---FKGVLSDGTAVAI---KRLTCGGQQGDKEFLVEVEMLSRLH 151
+++ LGEG +G V V + AV I KR + KE + L+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN----KMLN 62
Query: 152 HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR- 210
H N+VK G+ R+ + L E G L + +G+ DA R
Sbjct: 63 HENVVKFYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMP-----------EPDAQRF 109
Query: 211 ------GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRV 264
G+ YLH + HRD K N+LL+ + K++DFGLA L ++
Sbjct: 110 FHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 265 MGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKPVDMSQPSGQE 313
GT YVAPE + DV+S G+VL +L G P D S QE
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 95/230 (41%), Gaps = 34/230 (14%)
Query: 98 NFEPASILGEGGFGRV---FKGVLSDGTAVAI---KRLTCGGQQGDKEFLVEVEMLSRLH 151
+++ LGEG +G V V + AV I KR + KE + L+
Sbjct: 6 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN----KMLN 61
Query: 152 HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR- 210
H N+VK G+ R+ + L E G L + +G+ DA R
Sbjct: 62 HENVVKFYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMP-----------EPDAQRF 108
Query: 211 ------GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRV 264
G+ YLH + HRD K N+LL+ + K++DFGLA L ++
Sbjct: 109 FHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 165
Query: 265 MGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKPVDMSQPSGQE 313
GT YVAPE + DV+S G+VL +L G P D S QE
Sbjct: 166 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 215
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 95/230 (41%), Gaps = 34/230 (14%)
Query: 98 NFEPASILGEGGFGRV---FKGVLSDGTAVAI---KRLTCGGQQGDKEFLVEVEMLSRLH 151
+++ LGEG +G V V + AV I KR + KE + L+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN----KMLN 62
Query: 152 HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR- 210
H N+VK G+ R+ + L E G L + +G+ DA R
Sbjct: 63 HENVVKFYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMP-----------EPDAQRF 109
Query: 211 ------GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRV 264
G+ YLH + HRD K N+LL+ + K++DFGLA L ++
Sbjct: 110 FHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 265 MGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKPVDMSQPSGQE 313
GT YVAPE + DV+S G+VL +L G P D S QE
Sbjct: 167 XGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 23/218 (10%)
Query: 91 ELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GDKEFLVEVEML 147
E+ E N P +G G +G V G VA+K+L+ Q K E+ +L
Sbjct: 29 EVPERYQNLAP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 85
Query: 148 SRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNCHLDWETRMKI 204
+ H N++ L+ ++ S + LV + L + + + H+ + +
Sbjct: 86 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 140
Query: 205 ALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRV 264
RGL Y+H +IHRD K SN+ + + K+ DFGLA+ + T Y++TR
Sbjct: 141 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 196
Query: 265 MGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
Y APE + H D++S G ++ ELLTGR
Sbjct: 197 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 123/296 (41%), Gaps = 38/296 (12%)
Query: 88 AYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCG-GQQGDKEFLVEVE 145
A E + ++ EP LG G +G V K + G A+KR+ Q K L +++
Sbjct: 25 AXENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLD 84
Query: 146 MLSRLHHRNLVKLVGYYSSRDSSQHL-LCYELVPNGSLESWLHGPLGVNCHLDWETRMKI 204
+ R V +Y + + +C EL + SL+ + + + + KI
Sbjct: 85 ISXRTVDCPFT--VTFYGALFREGDVWICXELX-DTSLDKFYKQVIDKGQTIPEDILGKI 141
Query: 205 ALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGL--------AKQAPEGR 256
A+ + L +LH S+ VIHRD K SN+L+ K DFG+ AK G
Sbjct: 142 AVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGC 199
Query: 257 TNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLV 316
Y + + PE G+ VKSD++S G+ +EL R P D
Sbjct: 200 KPYXAPE------RINPELNQKGY-SVKSDIWSLGITXIELAILRFPYD----------- 241
Query: 317 TWARPILRDKDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQ 372
+W P + K +EE P+L +F+ + C+ + +RPT E+ Q
Sbjct: 242 SWGTPFQQLKQVVEE-PSPQLPADKFSAEFV---DFTSQCLKKNSKERPTYPELXQ 293
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 95/201 (47%), Gaps = 15/201 (7%)
Query: 105 LGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQG--DKEFLVEVEMLSRLHHRNLVKLVGY 161
+G G +G V + G VAIK+L+ Q K E+ +L + H N++ L+
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 162 YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQP 221
++ S ++ + LV +++ L +G+ E + +GL Y+H
Sbjct: 92 FTPASSLRNFYDFYLV-MPFMQTDLQKIMGLK--FSEEKIQYLVYQMLKGLKYIHSAG-- 146
Query: 222 CVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTG-H 280
V+HRD K N+ + + K+ DFGLA+ A T Y+ TR Y APE ++ H
Sbjct: 147 -VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYRAPEVILSWMH 200
Query: 281 LLVKSDVYSYGVVLLELLTGR 301
D++S G ++ E+LTG+
Sbjct: 201 YNQTVDIWSVGCIMAEMLTGK 221
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 94/200 (47%), Gaps = 13/200 (6%)
Query: 105 LGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYS 163
+GEG G V V S G VA+K++ QQ + EV ++ H N+V++ Y
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 164 SRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCV 223
D + + E + G+L + + ++ E + L + L+ LH V
Sbjct: 219 VGD--ELWVVMEFLEGGALTD-----IVTHTRMNEEQIAAVCLAVLQALSVLHAQG---V 268
Query: 224 IHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGHLLV 283
IHRD K+ +ILL ++ K++DFG Q + ++GT ++APE
Sbjct: 269 IHRDIKSDSILLTHDGRVKLSDFGFCAQV--SKEVPRRKXLVGTPYWMAPELISRLPYGP 326
Query: 284 KSDVYSYGVVLLELLTGRKP 303
+ D++S G++++E++ G P
Sbjct: 327 EVDIWSLGIMVIEMVDGEPP 346
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 96/232 (41%), Gaps = 34/232 (14%)
Query: 96 TNNFEPASILGEGGFGRV---FKGVLSDGTAVAI---KRLTCGGQQGDKEFLVEVEMLSR 149
+++ LGEG +G V V + AV I KR + KE + +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN----AM 61
Query: 150 LHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAA 209
L+H N+VK G+ R+ + L E G L + +G+ DA
Sbjct: 62 LNHENVVKFYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMP-----------EPDAQ 108
Query: 210 R-------GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
R G+ YLH + HRD K N+LL+ + K++DFGLA L
Sbjct: 109 RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165
Query: 263 RVMGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKPVDMSQPSGQE 313
++ GT YVAPE + DV+S G+VL +L G P D S QE
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 104/206 (50%), Gaps = 14/206 (6%)
Query: 105 LGEGGFGRVFKGVLS-DGTAVAIKRL-TCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYY 162
+G G +G V K V G +A+KR+ + ++ K+ L++++++ R + +V +Y
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMR--SSDCPYIVQFY 87
Query: 163 SSR-DSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQP 221
+ +C EL+ + + + ++ + E KI L + L +L E+ +
Sbjct: 88 GALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK- 146
Query: 222 CVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPE----YAM 277
+IHRD K SNILL+ + + K+ DFG++ Q + TR G Y+APE A
Sbjct: 147 -IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK---TRDAGCRPYMAPERIDPSAS 202
Query: 278 TGHLLVKSDVYSYGVVLLELLTGRKP 303
V+SDV+S G+ L EL TGR P
Sbjct: 203 RQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 102/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ D+GLA+ +
Sbjct: 126 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDYGLARHTDD 177
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 178 EMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 95/203 (46%), Gaps = 10/203 (4%)
Query: 103 SILGEGGFGRVFKGVLS-DGTAVAIKRLTCGGQQGD-KEFLVEVEMLSRLHHRNLVKLVG 160
S +GEG +G V + + VAI++++ Q + L E+++L R H N++ +
Sbjct: 33 SYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 161 YYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQ 220
+ Q Y + +E+ L+ L HL + RGL Y+H +
Sbjct: 93 IIRAPTIEQMKDVY--IVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSAN- 148
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQA-PEGRTNYLSTRVMGTFGYVAPEYAMTG 279
V+HRD K SN+LL K+ DFGLA+ A P+ T + T Y APE +
Sbjct: 149 --VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 280 HLLVKS-DVYSYGVVLLELLTGR 301
KS D++S G +L E+L+ R
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 95/230 (41%), Gaps = 34/230 (14%)
Query: 98 NFEPASILGEGGFGRV---FKGVLSDGTAVAI---KRLTCGGQQGDKEFLVEVEMLSRLH 151
+++ LGEG +G V V + AV I KR + KE + L+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXIN----KMLN 62
Query: 152 HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR- 210
H N+VK G+ R+ + L E G L + +G+ DA R
Sbjct: 63 HENVVKFYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMP-----------EPDAQRF 109
Query: 211 ------GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRV 264
G+ YLH + HRD K N+LL+ + K++DFGLA L ++
Sbjct: 110 FHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 265 MGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKPVDMSQPSGQE 313
GT YVAPE + DV+S G+VL +L G P D S QE
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 95/201 (47%), Gaps = 15/201 (7%)
Query: 105 LGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQG--DKEFLVEVEMLSRLHHRNLVKLVGY 161
+G G +G V + G VAIK+L+ Q K E+ +L + H N++ L+
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 162 YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQP 221
++ S ++ + LV +++ L +G+ E + +GL Y+H
Sbjct: 110 FTPASSLRNFYDFYLV-MPFMQTDLQKIMGME--FSEEKIQYLVYQMLKGLKYIHSAG-- 164
Query: 222 CVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTG-H 280
V+HRD K N+ + + K+ DFGLA+ A T Y+ TR Y APE ++ H
Sbjct: 165 -VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYRAPEVILSWMH 218
Query: 281 LLVKSDVYSYGVVLLELLTGR 301
D++S G ++ E+LTG+
Sbjct: 219 YNQTVDIWSVGCIMAEMLTGK 239
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 95/230 (41%), Gaps = 34/230 (14%)
Query: 98 NFEPASILGEGGFGRV---FKGVLSDGTAVAI---KRLTCGGQQGDKEFLVEVEMLSRLH 151
+++ LGEG +G V V + AV I KR + KE + L+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXIN----KMLN 62
Query: 152 HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR- 210
H N+VK G+ R+ + L E G L + +G+ DA R
Sbjct: 63 HENVVKFYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMP-----------EPDAQRF 109
Query: 211 ------GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRV 264
G+ YLH + HRD K N+LL+ + K++DFGLA L ++
Sbjct: 110 FHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 265 MGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKPVDMSQPSGQE 313
GT YVAPE + DV+S G+VL +L G P D S QE
Sbjct: 167 XGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 119/268 (44%), Gaps = 36/268 (13%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
LG G FG V G VAIK + G D EF+ E +++ L H LV+L G +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ + E + NG L ++L + + +++ D + YL E Q +
Sbjct: 76 QRPI--FIITEYMANGCLLNYLRE---MRHRFQTQQLLEMCKDVCEAMEYL-ESKQ--FL 127
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT---FGYVAPEYAMTGHL 281
HRD A N L+ + KV+DFGL++ + Y S+R G+ + PE M
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDD--EYTSSR--GSKFPVRWSPPEVLMYSKF 183
Query: 282 LVKSDVYSYGVVLLELLT-GRKPVD-MSQPSGQENLVTWARPILRDKDRLEELADPRLGG 339
KSD++++GV++ E+ + G+ P + + E++ R L P L
Sbjct: 184 SSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLR-----------LYRPHLAS 232
Query: 340 KYPKEDFIRVCTIAAACVAPEANQRPTM 367
+ +V TI +C +A++RPT
Sbjct: 233 E-------KVYTIMYSCWHEKADERPTF 253
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 95/232 (40%), Gaps = 34/232 (14%)
Query: 96 TNNFEPASILGEGGFGRV---FKGVLSDGTAVAI---KRLTCGGQQGDKEFLVEVEMLSR 149
+++ LGEG +G V V + AV I KR + KE +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN----KM 61
Query: 150 LHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAA 209
L+H N+VK G+ R+ + L E G L + +G+ DA
Sbjct: 62 LNHENVVKFYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMP-----------EPDAQ 108
Query: 210 R-------GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
R G+ YLH + HRD K N+LL+ + K++DFGLA L
Sbjct: 109 RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165
Query: 263 RVMGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKPVDMSQPSGQE 313
++ GT YVAPE + DV+S G+VL +L G P D S QE
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 95/232 (40%), Gaps = 34/232 (14%)
Query: 96 TNNFEPASILGEGGFGRV---FKGVLSDGTAVAI---KRLTCGGQQGDKEFLVEVEMLSR 149
+++ LGEG +G V V + AV I KR + KE +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN----KM 60
Query: 150 LHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAA 209
L+H N+VK G+ R+ + L E G L + +G+ DA
Sbjct: 61 LNHENVVKFYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMP-----------EPDAQ 107
Query: 210 R-------GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
R G+ YLH + HRD K N+LL+ + K++DFGLA L
Sbjct: 108 RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 263 RVMGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKPVDMSQPSGQE 313
++ GT YVAPE + DV+S G+VL +L G P D S QE
Sbjct: 165 KMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 95/232 (40%), Gaps = 34/232 (14%)
Query: 96 TNNFEPASILGEGGFGRV---FKGVLSDGTAVAI---KRLTCGGQQGDKEFLVEVEMLSR 149
+++ LGEG +G V V + AV I KR + KE +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXIN----KM 61
Query: 150 LHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAA 209
L+H N+VK G+ R+ + L E G L + +G+ DA
Sbjct: 62 LNHENVVKFYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMP-----------EPDAQ 108
Query: 210 R-------GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
R G+ YLH + HRD K N+LL+ + K++DFGLA L
Sbjct: 109 RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165
Query: 263 RVMGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKPVDMSQPSGQE 313
++ GT YVAPE + DV+S G+VL +L G P D S QE
Sbjct: 166 KMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 95/232 (40%), Gaps = 34/232 (14%)
Query: 96 TNNFEPASILGEGGFGRV---FKGVLSDGTAVAI---KRLTCGGQQGDKEFLVEVEMLSR 149
+++ LGEG +G V V + AV I KR + KE +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN----KM 60
Query: 150 LHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAA 209
L+H N+VK G+ R+ + L E G L + +G+ DA
Sbjct: 61 LNHENVVKFYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMP-----------EPDAQ 107
Query: 210 R-------GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
R G+ YLH + HRD K N+LL+ + K++DFGLA L
Sbjct: 108 RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 263 RVMGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKPVDMSQPSGQE 313
++ GT YVAPE + DV+S G+VL +L G P D S QE
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 95/232 (40%), Gaps = 34/232 (14%)
Query: 96 TNNFEPASILGEGGFGRV---FKGVLSDGTAVAI---KRLTCGGQQGDKEFLVEVEMLSR 149
+++ LGEG +G V V + AV I KR + KE +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN----KM 60
Query: 150 LHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAA 209
L+H N+VK G+ R+ + L E G L + +G+ DA
Sbjct: 61 LNHENVVKFYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMP-----------EPDAQ 107
Query: 210 R-------GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
R G+ YLH + HRD K N+LL+ + K++DFGLA L
Sbjct: 108 RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 263 RVMGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKPVDMSQPSGQE 313
++ GT YVAPE + DV+S G+VL +L G P D S QE
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 95/232 (40%), Gaps = 34/232 (14%)
Query: 96 TNNFEPASILGEGGFGRV---FKGVLSDGTAVAI---KRLTCGGQQGDKEFLVEVEMLSR 149
+++ LGEG +G V V + AV I KR + KE +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN----KM 60
Query: 150 LHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAA 209
L+H N+VK G+ R+ + L E G L + +G+ DA
Sbjct: 61 LNHENVVKFYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMP-----------EPDAQ 107
Query: 210 R-------GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
R G+ YLH + HRD K N+LL+ + K++DFGLA L
Sbjct: 108 RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 263 RVMGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKPVDMSQPSGQE 313
++ GT YVAPE + DV+S G+VL +L G P D S QE
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 95/232 (40%), Gaps = 34/232 (14%)
Query: 96 TNNFEPASILGEGGFGRV---FKGVLSDGTAVAI---KRLTCGGQQGDKEFLVEVEMLSR 149
+++ LGEG +G V V + AV I KR + KE +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN----KM 61
Query: 150 LHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAA 209
L+H N+VK G+ R+ + L E G L + +G+ DA
Sbjct: 62 LNHENVVKFYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMP-----------EPDAQ 108
Query: 210 R-------GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
R G+ YLH + HRD K N+LL+ + K++DFGLA L
Sbjct: 109 RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165
Query: 263 RVMGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKPVDMSQPSGQE 313
++ GT YVAPE + DV+S G+VL +L G P D S QE
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 91/205 (44%), Gaps = 19/205 (9%)
Query: 104 ILGEGGFGRVF--KGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGY 161
+LG G F VF K L+ G A+K + D E+ +L ++ H N+V L
Sbjct: 16 VLGSGAFSEVFLVKQRLT-GKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDI 74
Query: 162 YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQP 221
Y S ++ + L +LV G L + GV D ++ L A + YLHE+
Sbjct: 75 YES--TTHYYLVMQLVSGGELFDRI-LERGVYTEKDASLVIQQVLSAVK---YLHENG-- 126
Query: 222 CVIHRDFKASNILL---ENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMT 278
++HRD K N+L E N + DFGL+K G + + GT GYVAPE
Sbjct: 127 -IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG----IMSTACGTPGYVAPEVLAQ 181
Query: 279 GHLLVKSDVYSYGVVLLELLTGRKP 303
D +S GV+ LL G P
Sbjct: 182 KPYSKAVDCWSIGVITYILLCGYPP 206
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 117/267 (43%), Gaps = 34/267 (12%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
LG G FG V G VAIK + G D EF+ E +++ L H LV+L G +
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ + E + NG L ++L + + +++ D + YL E Q +
Sbjct: 71 QRPI--FIITEYMANGCLLNYLRE---MRHRFQTQQLLEMCKDVCEAMEYL-ESKQ--FL 122
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMTGHLL 282
HRD A N L+ + KV+DFGL++ + ++ V F + PE M
Sbjct: 123 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSVGSKFPVRWSPPEVLMYSKFS 179
Query: 283 VKSDVYSYGVVLLELLT-GRKPVD-MSQPSGQENLVTWARPILRDKDRLEELADPRLGGK 340
KSD++++GV++ E+ + G+ P + + E++ R L P L +
Sbjct: 180 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLR-----------LYRPHLASE 228
Query: 341 YPKEDFIRVCTIAAACVAPEANQRPTM 367
+V TI +C +A++RPT
Sbjct: 229 -------KVYTIMYSCWHEKADERPTF 248
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 95/232 (40%), Gaps = 34/232 (14%)
Query: 96 TNNFEPASILGEGGFGRV---FKGVLSDGTAVAI---KRLTCGGQQGDKEFLVEVEMLSR 149
+++ LGEG +G V V + AV I KR + KE +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN----KM 60
Query: 150 LHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAA 209
L+H N+VK G+ R+ + L E G L + +G+ DA
Sbjct: 61 LNHENVVKFYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMP-----------EPDAQ 107
Query: 210 R-------GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST 262
R G+ YLH + HRD K N+LL+ + K++DFGLA L
Sbjct: 108 RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 263 RVMGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKPVDMSQPSGQE 313
++ GT YVAPE + DV+S G+VL +L G P D S QE
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 117/267 (43%), Gaps = 34/267 (12%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
LG G FG V G VAIK + G D EF+ E +++ L H LV+L G +
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ + E + NG L ++L + + +++ D + YL E Q +
Sbjct: 75 QRPI--FIITEYMANGCLLNYLRE---MRHRFQTQQLLEMCKDVCEAMEYL-ESKQ--FL 126
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMTGHLL 282
HRD A N L+ + KV+DFGL++ + ++ V F + PE M
Sbjct: 127 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSVGSKFPVRWSPPEVLMYSKFS 183
Query: 283 VKSDVYSYGVVLLELLT-GRKPVD-MSQPSGQENLVTWARPILRDKDRLEELADPRLGGK 340
KSD++++GV++ E+ + G+ P + + E++ R L P L +
Sbjct: 184 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLR-----------LYRPHLASE 232
Query: 341 YPKEDFIRVCTIAAACVAPEANQRPTM 367
+V TI +C +A++RPT
Sbjct: 233 -------KVYTIMYSCWHEKADERPTF 252
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 108/240 (45%), Gaps = 38/240 (15%)
Query: 97 NNFEPASILGEGGFGRVFKGVLS-DGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNL 155
++FE ++LG+G FG+V K + D AIK++ ++ L EV +L+ L+H+ +
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVXLLASLNHQYV 64
Query: 156 VKLVGYYSSR-----------DSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKI 204
V+ + R S + E N +L +H N + + ++
Sbjct: 65 VRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSE---NLNQQRDEYWRL 121
Query: 205 ALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAK-------------Q 251
L+Y+H +IHR+ K NI ++ + + K+ DFGLAK Q
Sbjct: 122 FRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 252 APEGRTNYLSTRVMGTFGYVAPEYAM-TGHLLVKSDVYSYGVVLLELL----TGRKPVDM 306
G ++ L T +GT YVA E TGH K D YS G++ E + TG + V++
Sbjct: 179 NLPGSSDNL-TSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIYPFSTGXERVNI 237
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 97/220 (44%), Gaps = 18/220 (8%)
Query: 91 ELKEATNNFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEF---LVEVEM 146
++K +F +LG+G FG+VF AIK L D + +VE +
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 147 LS-RLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCH-LDWETRMKI 204
LS H L + + ++++ E + G L + +CH D
Sbjct: 71 LSLAWEHPFLTHMFCTFQTKENL--FFVMEYLNGGDLMYHIQ-----SCHKFDLSRATFY 123
Query: 205 ALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRV 264
A + GL +LH +++RD K NILL+ + H K+ADFG+ K+ G +
Sbjct: 124 AAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TNXF 178
Query: 265 MGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPV 304
GT Y+APE + D +S+GV+L E+L G+ P
Sbjct: 179 CGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 218
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 95/230 (41%), Gaps = 34/230 (14%)
Query: 98 NFEPASILGEGGFGRV---FKGVLSDGTAVAI---KRLTCGGQQGDKEFLVEVEMLSRLH 151
+++ LGEG +G V V + AV I KR + KE + L+
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN----KMLN 63
Query: 152 HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR- 210
H N+VK G+ R+ + L E G L + +G+ DA R
Sbjct: 64 HENVVKFYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMP-----------EPDAQRF 110
Query: 211 ------GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRV 264
G+ YLH + HRD K N+LL+ + K++DFGLA L ++
Sbjct: 111 FHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 167
Query: 265 MGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKPVDMSQPSGQE 313
GT YVAPE + DV+S G+VL +L G P D S QE
Sbjct: 168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 95/230 (41%), Gaps = 34/230 (14%)
Query: 98 NFEPASILGEGGFGRV---FKGVLSDGTAVAI---KRLTCGGQQGDKEFLVEVEMLSRLH 151
+++ LGEG +G V V + AV I KR + KE + L+
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN----KMLN 63
Query: 152 HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR- 210
H N+VK G+ R+ + L E G L + +G+ DA R
Sbjct: 64 HENVVKFYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMP-----------EPDAQRF 110
Query: 211 ------GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRV 264
G+ YLH + HRD K N+LL+ + K++DFGLA L ++
Sbjct: 111 FHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 167
Query: 265 MGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKPVDMSQPSGQE 313
GT YVAPE + DV+S G+VL +L G P D S QE
Sbjct: 168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 95/230 (41%), Gaps = 34/230 (14%)
Query: 98 NFEPASILGEGGFGRV---FKGVLSDGTAVAI---KRLTCGGQQGDKEFLVEVEMLSRLH 151
+++ LGEG +G V V + AV I KR + KE + L+
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN----KMLN 63
Query: 152 HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR- 210
H N+VK G+ R+ + L E G L + +G+ DA R
Sbjct: 64 HENVVKFYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMP-----------EPDAQRF 110
Query: 211 ------GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRV 264
G+ YLH + HRD K N+LL+ + K++DFGLA L ++
Sbjct: 111 FHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 167
Query: 265 MGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKPVDMSQPSGQE 313
GT YVAPE + DV+S G+VL +L G P D S QE
Sbjct: 168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 95/230 (41%), Gaps = 34/230 (14%)
Query: 98 NFEPASILGEGGFGRV---FKGVLSDGTAVAI---KRLTCGGQQGDKEFLVEVEMLSRLH 151
+++ LGEG +G V V + AV I KR + KE + L+
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN----KMLN 63
Query: 152 HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR- 210
H N+VK G+ R+ + L E G L + +G+ DA R
Sbjct: 64 HENVVKFYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMP-----------EPDAQRF 110
Query: 211 ------GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRV 264
G+ YLH + HRD K N+LL+ + K++DFGLA L ++
Sbjct: 111 FHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 167
Query: 265 MGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKPVDMSQPSGQE 313
GT YVAPE + DV+S G+VL +L G P D S QE
Sbjct: 168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 95/230 (41%), Gaps = 34/230 (14%)
Query: 98 NFEPASILGEGGFGRV---FKGVLSDGTAVAI---KRLTCGGQQGDKEFLVEVEMLSRLH 151
+++ LGEG +G V V + AV I KR + KE + L+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN----KMLN 62
Query: 152 HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR- 210
H N+VK G+ R+ + L E G L + +G+ DA R
Sbjct: 63 HENVVKFYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMP-----------EPDAQRF 109
Query: 211 ------GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRV 264
G+ YLH + HRD K N+LL+ + K++DFGLA L ++
Sbjct: 110 FHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 265 MGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKPVDMSQPSGQE 313
GT YVAPE + DV+S G+VL +L G P D S QE
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 117/267 (43%), Gaps = 34/267 (12%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
LG G FG V G VAIK + G D EF+ E +++ L H LV+L G +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ + E + NG L ++L + + +++ D + YL E Q +
Sbjct: 91 QRPI--FIITEYMANGCLLNYLRE---MRHRFQTQQLLEMCKDVCEAMEYL-ESKQ--FL 142
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMTGHLL 282
HRD A N L+ + KV+DFGL++ + ++ V F + PE M
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEE---TSSVGSKFPVRWSPPEVLMYSKFS 199
Query: 283 VKSDVYSYGVVLLELLT-GRKPVD-MSQPSGQENLVTWARPILRDKDRLEELADPRLGGK 340
KSD++++GV++ E+ + G+ P + + E++ R L P L +
Sbjct: 200 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLR-----------LYRPHLASE 248
Query: 341 YPKEDFIRVCTIAAACVAPEANQRPTM 367
+V TI +C +A++RPT
Sbjct: 249 -------KVYTIMYSCWHEKADERPTF 268
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 104/230 (45%), Gaps = 20/230 (8%)
Query: 85 RFLAYEELKE---ATNNFEPASILGEGGFGRVFKGVL-SDGTAVA------IKRLTCGGQ 134
RFL ++ L+ + F +LG GGFG VF + + G A + G
Sbjct: 170 RFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGY 229
Query: 135 QGDKEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNC 194
QG +VE ++L+++H R +V L Y+ + L ++ G + ++ N
Sbjct: 230 QGA---MVEKKILAKVHSRFIVSLA--YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNP 284
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
+ GL +LH Q +I+RD K N+LL+++ + +++D GLA +
Sbjct: 285 GFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPV 304
G+T + GT G++APE + D ++ GV L E++ R P
Sbjct: 342 GQTK--TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 117/267 (43%), Gaps = 34/267 (12%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
LG G FG V G VAIK + G D EF+ E +++ L H LV+L G +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ + E + NG L ++L + + +++ D + YL E Q +
Sbjct: 91 QRPI--FIITEYMANGCLLNYLRE---MRHRFQTQQLLEMCKDVCEAMEYL-ESKQ--FL 142
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMTGHLL 282
HRD A N L+ + KV+DFGL++ + ++ V F + PE M
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSVGSKFPVRWSPPEVLMYSKFS 199
Query: 283 VKSDVYSYGVVLLELLT-GRKPVD-MSQPSGQENLVTWARPILRDKDRLEELADPRLGGK 340
KSD++++GV++ E+ + G+ P + + E++ R L P L +
Sbjct: 200 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLR-----------LYRPHLASE 248
Query: 341 YPKEDFIRVCTIAAACVAPEANQRPTM 367
+V TI +C +A++RPT
Sbjct: 249 -------KVYTIMYSCWHEKADERPTF 268
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 105 LGEGGFGRVFKGVLS-DGTAVAIKRLTCGGQQGDKEFLV------EVEMLSRLHHRNLVK 157
LG G FG+V G G VA+K L +Q + V E++ L H +++K
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKIL---NRQKIRSLDVVGKIRREIQNLKLFRHPHIIK 80
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHE 217
L S+ S + E V G L ++ N LD + ++ G+ Y H
Sbjct: 81 LYQVIST--PSDIFMVMEYVSGGELFDYI----CKNGRLDEKESRRLFQQILSGVDYCH- 133
Query: 218 DSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAM 277
+ V+HRD K N+LL+ + +AK+ADFGL+ +G S G+ Y APE +
Sbjct: 134 --RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC---GSPNYAAPE-VI 187
Query: 278 TGHLLV--KSDVYSYGVVLLELLTGRKPVD 305
+G L + D++S GV+L LL G P D
Sbjct: 188 SGRLYAGPEVDIWSSGVILYALLCGTLPFD 217
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 107/230 (46%), Gaps = 20/230 (8%)
Query: 85 RFLAYEELKE---ATNNFEPASILGEGGFGRVFKGVL-SDGTAVAIKRLTCG------GQ 134
RFL ++ L+ + F +LG GGFG VF + + G A K+L G
Sbjct: 170 RFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGY 229
Query: 135 QGDKEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNC 194
QG +VE ++L+++H R +V L Y+ + L ++ G + ++ N
Sbjct: 230 QGA---MVEKKILAKVHSRFIVSLA--YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNP 284
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
+ GL +LH+ + +I+RD K N+LL+++ + +++D GLA +
Sbjct: 285 GFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPV 304
G+T + GT G++APE + D ++ GV L E++ R P
Sbjct: 342 GQTK--TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 20/230 (8%)
Query: 85 RFLAYEELKE---ATNNFEPASILGEGGFGRVFKGVL-SDGTAVAIKRLTCG------GQ 134
RFL ++ L+ + F +LG GGFG VF + + G A K+L G
Sbjct: 170 RFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGY 229
Query: 135 QGDKEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNC 194
QG +VE ++L+++H R +V L Y+ + L ++ G + ++ N
Sbjct: 230 QGA---MVEKKILAKVHSRFIVSLA--YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNP 284
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
+ GL +LH Q +I+RD K N+LL+++ + +++D GLA +
Sbjct: 285 GFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPV 304
G+T + GT G++APE + D ++ GV L E++ R P
Sbjct: 342 GQTK--TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 20/230 (8%)
Query: 85 RFLAYEELKE---ATNNFEPASILGEGGFGRVFKGVL-SDGTAVAIKRLTCG------GQ 134
RFL ++ L+ + F +LG GGFG VF + + G A K+L G
Sbjct: 170 RFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGY 229
Query: 135 QGDKEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNC 194
QG +VE ++L+++H R +V L Y+ + L ++ G + ++ N
Sbjct: 230 QGA---MVEKKILAKVHSRFIVSLA--YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNP 284
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
+ GL +LH Q +I+RD K N+LL+++ + +++D GLA +
Sbjct: 285 GFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPV 304
G+T + GT G++APE + D ++ GV L E++ R P
Sbjct: 342 GQTK--TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 102/234 (43%), Gaps = 20/234 (8%)
Query: 75 GGSLPHPTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGG 133
S PT R + + E ++ S +G G +G V G VA+K+L+
Sbjct: 23 NASQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF 82
Query: 134 QQ--GDKEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHG 188
Q K E+ +L + H N++ L+ ++ S + LV + L + +
Sbjct: 83 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC 142
Query: 189 PLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGL 248
+ H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGL
Sbjct: 143 QKLTDDHVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGL 194
Query: 249 AKQAPEGRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
A+ + Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 195 ARHTDDEMXGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 117/267 (43%), Gaps = 34/267 (12%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
LG G FG V G VAIK + G D EF+ E +++ L H LV+L G +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ + E + NG L ++L + + +++ D + YL E Q +
Sbjct: 76 QRPI--FIITEYMANGCLLNYLRE---MRHRFQTQQLLEMCKDVCEAMEYL-ESKQ--FL 127
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMTGHLL 282
HRD A N L+ + KV+DFGL++ + ++ V F + PE M
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSVGSKFPVRWSPPEVLMYSKFS 184
Query: 283 VKSDVYSYGVVLLELLT-GRKPVD-MSQPSGQENLVTWARPILRDKDRLEELADPRLGGK 340
KSD++++GV++ E+ + G+ P + + E++ R L P L +
Sbjct: 185 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLR-----------LYRPHLASE 233
Query: 341 YPKEDFIRVCTIAAACVAPEANQRPTM 367
+V TI +C +A++RPT
Sbjct: 234 -------KVYTIMYSCWHEKADERPTF 253
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 94/203 (46%), Gaps = 10/203 (4%)
Query: 103 SILGEGGFGRVFKGVLS-DGTAVAIKRLTCGGQQGD-KEFLVEVEMLSRLHHRNLVKLVG 160
S +GEG +G V + + VAIK+++ Q + L E+++L R H N++ +
Sbjct: 33 SYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 161 YYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQ 220
+ Q Y + +E+ L+ L HL + RGL Y+H +
Sbjct: 93 IIRAPTIEQMKDVY--IVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSAN- 148
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQA-PEGRTNYLSTRVMGTFGYVAPEYAMTG 279
V+HRD K SN+LL K+ DFGLA+ A P+ + T Y APE +
Sbjct: 149 --VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNS 206
Query: 280 HLLVKS-DVYSYGVVLLELLTGR 301
KS D++S G +L E+L+ R
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 94/203 (46%), Gaps = 10/203 (4%)
Query: 103 SILGEGGFGRVFKGVLS-DGTAVAIKRLTCGGQQGD-KEFLVEVEMLSRLHHRNLVKLVG 160
S +GEG +G V + + VAIK+++ Q + L E+++L R H N++ +
Sbjct: 34 SYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 93
Query: 161 YYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQ 220
+ Q Y + +E+ L+ L HL + RGL Y+H +
Sbjct: 94 IIRAPTIEQMKDVY--IVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSAN- 149
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQA-PEGRTNYLSTRVMGTFGYVAPEYAMTG 279
V+HRD K SN+LL K+ DFGLA+ A P+ + T Y APE +
Sbjct: 150 --VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNS 207
Query: 280 HLLVKS-DVYSYGVVLLELLTGR 301
KS D++S G +L E+L+ R
Sbjct: 208 KGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 117/267 (43%), Gaps = 34/267 (12%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSS 164
LG G FG V G VAIK + G D EF+ E +++ L H LV+L G +
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 165 RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVI 224
+ + E + NG L ++L + + +++ D + YL E Q +
Sbjct: 82 QRPI--FIITEYMANGCLLNYLRE---MRHRFQTQQLLEMCKDVCEAMEYL-ESKQ--FL 133
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAMTGHLL 282
HRD A N L+ + KV+DFGL++ + ++ V F + PE M
Sbjct: 134 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSVGSKFPVRWSPPEVLMYSKFS 190
Query: 283 VKSDVYSYGVVLLELLT-GRKPVD-MSQPSGQENLVTWARPILRDKDRLEELADPRLGGK 340
KSD++++GV++ E+ + G+ P + + E++ R L P L +
Sbjct: 191 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLR-----------LYRPHLASE 239
Query: 341 YPKEDFIRVCTIAAACVAPEANQRPTM 367
+V TI +C +A++RPT
Sbjct: 240 -------KVYTIMYSCWHEKADERPTF 259
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 98/204 (48%), Gaps = 21/204 (10%)
Query: 105 LGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYS 163
+GEG G V V S G VA+K++ QQ + EV ++ H N+V++ Y
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 164 SRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCV 223
D + + E + G+L + + ++ E + L + L+ LH V
Sbjct: 99 VGD--ELWVVMEFLEGGALTD-----IVTHTRMNEEQIAAVCLAVLQALSVLHAQG---V 148
Query: 224 IHRDFKASNILLENNFHAKVADFG----LAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTG 279
IHRD K+ +ILL ++ K++DFG ++K+ P + ++GT ++APE
Sbjct: 149 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX------LVGTPYWMAPELISRL 202
Query: 280 HLLVKSDVYSYGVVLLELLTGRKP 303
+ D++S G++++E++ G P
Sbjct: 203 PYGPEVDIWSLGIMVIEMVDGEPP 226
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 98/204 (48%), Gaps = 21/204 (10%)
Query: 105 LGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYS 163
+GEG G V V S G VA+K++ QQ + EV ++ H N+V++ Y
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 164 SRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCV 223
D + + E + G+L + + ++ E + L + L+ LH V
Sbjct: 97 VGD--ELWVVMEFLEGGALTD-----IVTHTRMNEEQIAAVCLAVLQALSVLHAQG---V 146
Query: 224 IHRDFKASNILLENNFHAKVADFG----LAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTG 279
IHRD K+ +ILL ++ K++DFG ++K+ P + ++GT ++APE
Sbjct: 147 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX------LVGTPYWMAPELISRL 200
Query: 280 HLLVKSDVYSYGVVLLELLTGRKP 303
+ D++S G++++E++ G P
Sbjct: 201 PYGPEVDIWSLGIMVIEMVDGEPP 224
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 98/204 (48%), Gaps = 21/204 (10%)
Query: 105 LGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYS 163
+GEG G V V S G VA+K++ QQ + EV ++ H N+V++ Y
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 164 SRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCV 223
D + + E + G+L + + ++ E + L + L+ LH V
Sbjct: 142 VGD--ELWVVMEFLEGGALTD-----IVTHTRMNEEQIAAVCLAVLQALSVLHAQG---V 191
Query: 224 IHRDFKASNILLENNFHAKVADFG----LAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTG 279
IHRD K+ +ILL ++ K++DFG ++K+ P + ++GT ++APE
Sbjct: 192 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX------LVGTPYWMAPELISRL 245
Query: 280 HLLVKSDVYSYGVVLLELLTGRKP 303
+ D++S G++++E++ G P
Sbjct: 246 PYGPEVDIWSLGIMVIEMVDGEPP 269
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 106/225 (47%), Gaps = 36/225 (16%)
Query: 96 TNNFEPASILGEGGFGRVF---KGVLSDGTAVAIKRLTCGGQQGDKEFLV-EVEMLSRLH 151
++ ++ +LG+G FG V + AV + Q+ DKE L+ EV++L +L
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 152 HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIA-LDAAR 210
H N+ KL ++ D L E+ G L + +R + + +DAAR
Sbjct: 85 HPNIXKLYEFF--EDKGYFYLVGEVYTGGELFDEII------------SRKRFSEVDAAR 130
Query: 211 -------GLAYLHEDSQPCVIHRDFKASNILLEN---NFHAKVADFGLAKQAPEGRTNYL 260
G+ Y H++ ++HRD K N+LLE+ + + ++ DFGL+ +
Sbjct: 131 IIRQVLSGITYXHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK--- 184
Query: 261 STRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 305
+GT Y+APE + G K DV+S GV+L LL+G P +
Sbjct: 185 XKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFN 228
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 95/203 (46%), Gaps = 14/203 (6%)
Query: 105 LGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQGD-KEFLVEVEMLSRLHHRNLVKL--VG 160
+GEG +G V T VAIK+++ Q + L E+++L R H N++ + +
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDIL 110
Query: 161 YYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQ 220
S+ ++ + + + + L L N H+ + RGL Y+H +
Sbjct: 111 RASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICY-----FLYQILRGLKYIHSAN- 164
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQA-PEGRTNYLSTRVMGTFGYVAPEYAMTG 279
V+HRD K SN+L+ K+ DFGLA+ A PE T + T Y APE +
Sbjct: 165 --VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNS 222
Query: 280 HLLVKS-DVYSYGVVLLELLTGR 301
KS D++S G +L E+L+ R
Sbjct: 223 KGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 133/300 (44%), Gaps = 36/300 (12%)
Query: 94 EATNNFEPASILGEGGFGRVFKGVLSD-GTAVAIKRL--TCGGQQGDKEFLVEVEMLSRL 150
++ +E ++GEG +G V K D G VAIK+ + + K + E+++L +L
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL 81
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
H NLV L+ + + L +E V + L+ P G LD++ K
Sbjct: 82 RHENLVNLLE--VCKKKKRWYLVFEFVDHTILDDLELFPNG----LDYQVVQKYLFQIIN 135
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQ--AP-EGRTNYLSTRVMGT 267
G+ + H + +IHRD K NIL+ + K+ DFG A+ AP E + ++TR
Sbjct: 136 GIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATR---- 188
Query: 268 FGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRK--PVDMSQPSGQENLVTWARPILR 324
Y APE + K+ DV++ G ++ E+ G P D ++ I R
Sbjct: 189 -WYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPR 247
Query: 325 DKD-----------RLEELADPR-LGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQ 372
++ RL E+ + L +YPK + V +A C+ + ++RP E++
Sbjct: 248 HQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEV-VIDLAKKCLHIDPDKRPFCAELLH 306
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 96/211 (45%), Gaps = 19/211 (9%)
Query: 99 FEPASILGEGGFGRVF---KGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNL 155
++ LG G +G V V A+ I R T + + L EV +L L H N+
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNI 98
Query: 156 VKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYL 215
+KL ++ D + L E G L + + N +D +K L G+ YL
Sbjct: 99 MKLYDFF--EDKRNYYLVMECYKGGELFDEIIHRMKFN-EVDAAVIIKQVL---SGVTYL 152
Query: 216 HEDSQPCVIHRDFKASNILLEN---NFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVA 272
H+ + ++HRD K N+LLE+ + K+ DFGL+ A + R +GT Y+A
Sbjct: 153 HKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLS--AVFENQKKMKER-LGTAYYIA 206
Query: 273 PEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
PE + K DV+S GV+L LL G P
Sbjct: 207 PE-VLRKKYDEKCDVWSIGVILFILLAGYPP 236
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 94/203 (46%), Gaps = 10/203 (4%)
Query: 103 SILGEGGFGRVFKGVLS-DGTAVAIKRLTCGGQQGD-KEFLVEVEMLSRLHHRNLVKLVG 160
S +GEG +G V + + VAIK+++ Q + L E+++L H N++ +
Sbjct: 31 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGIND 90
Query: 161 YYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQ 220
+ Q Y + +E+ L+ L HL + RGL Y+H +
Sbjct: 91 IIRAPTIEQMKDVY--IVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSAN- 146
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQA-PEGRTNYLSTRVMGTFGYVAPEYAMTG 279
V+HRD K SN+LL K+ DFGLA+ A P+ T + T Y APE +
Sbjct: 147 --VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 280 HLLVKS-DVYSYGVVLLELLTGR 301
KS D++S G +L E+L+ R
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 98/204 (48%), Gaps = 21/204 (10%)
Query: 105 LGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYS 163
+GEG G V V S G VA+K++ QQ + EV ++ H N+V++ Y
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 164 SRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCV 223
D + + E + G+L + + ++ E + L + L+ LH V
Sbjct: 88 VGD--ELWVVMEFLEGGALTD-----IVTHTRMNEEQIAAVCLAVLQALSVLHAQG---V 137
Query: 224 IHRDFKASNILLENNFHAKVADFG----LAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTG 279
IHRD K+ +ILL ++ K++DFG ++K+ P + ++GT ++APE
Sbjct: 138 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX------LVGTPYWMAPELISRL 191
Query: 280 HLLVKSDVYSYGVVLLELLTGRKP 303
+ D++S G++++E++ G P
Sbjct: 192 PYGPEVDIWSLGIMVIEMVDGEPP 215
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 101/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGLA+ +
Sbjct: 126 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
T ++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 178 EMTGXVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 101/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ FGLA+ +
Sbjct: 126 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILGFGLARHTDD 177
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 178 EMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 98/204 (48%), Gaps = 21/204 (10%)
Query: 105 LGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYS 163
+GEG G V V S G VA+K++ QQ + EV ++ H N+V++ Y
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 164 SRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCV 223
D + + E + G+L + + ++ E + L + L+ LH V
Sbjct: 92 VGD--ELWVVMEFLEGGALTD-----IVTHTRMNEEQIAAVCLAVLQALSVLHAQG---V 141
Query: 224 IHRDFKASNILLENNFHAKVADFG----LAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTG 279
IHRD K+ +ILL ++ K++DFG ++K+ P + ++GT ++APE
Sbjct: 142 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX------LVGTPYWMAPELISRL 195
Query: 280 HLLVKSDVYSYGVVLLELLTGRKP 303
+ D++S G++++E++ G P
Sbjct: 196 PYGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 106/225 (47%), Gaps = 24/225 (10%)
Query: 92 LKEATNNFEPASILGEGGFGRVFKG--VLSDGTAVAIKRLTC-GGQQG-DKEFLVEVEML 147
L A +E + +GEG +G+VFK + + G VA+KR+ G++G + EV +L
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 148 SRLH---HRNLVKL--VGYYSSRDSSQHL-LCYELVPNGSLESWLHG--PLGVNCHLDWE 199
L H N+V+L V S D L L +E V + L ++L GV E
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPT----E 120
Query: 200 TRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNY 259
T + RGL +LH V+HRD K NIL+ ++ K+ADFGLA+
Sbjct: 121 TIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQM 174
Query: 260 LSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPV 304
T V+ T Y APE + D++S G + E+ RKP+
Sbjct: 175 ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 106/225 (47%), Gaps = 24/225 (10%)
Query: 92 LKEATNNFEPASILGEGGFGRVFKG--VLSDGTAVAIKRLTC-GGQQG-DKEFLVEVEML 147
L A +E + +GEG +G+VFK + + G VA+KR+ G++G + EV +L
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 148 SRLH---HRNLVKL--VGYYSSRDSSQHL-LCYELVPNGSLESWLHG--PLGVNCHLDWE 199
L H N+V+L V S D L L +E V + L ++L GV E
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPT----E 120
Query: 200 TRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNY 259
T + RGL +LH V+HRD K NIL+ ++ K+ADFGLA+
Sbjct: 121 TIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYS---FQM 174
Query: 260 LSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPV 304
T V+ T Y APE + D++S G + E+ RKP+
Sbjct: 175 ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 103/214 (48%), Gaps = 19/214 (8%)
Query: 97 NNFEPASILGEGGFGRVF---KGVLSDGTAV-AIKRLTCGGQQGDKEFLVEVE--MLSRL 150
+ FE +LG+G FG+VF K SD + A+K L + ++E +L +
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIAL-DAA 209
+H +VKL +Y+ + + L + + G L + L + E +K L + A
Sbjct: 84 NHPFIVKL--HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFT-----EEDVKFYLAELA 136
Query: 210 RGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFG 269
L +LH +I+RD K NILL+ H K+ DFGL+K++ + S GT
Sbjct: 137 LALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVE 191
Query: 270 YVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
Y+APE +D +S+GV++ E+LTG P
Sbjct: 192 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 101/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 65
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ DF LA+ +
Sbjct: 126 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFYLARHTDD 177
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 178 EMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 94/230 (40%), Gaps = 34/230 (14%)
Query: 98 NFEPASILGEGGFGRV---FKGVLSDGTAVAI---KRLTCGGQQGDKEFLVEVEMLSRLH 151
+++ LGEG G V V + AV I KR + KE + L+
Sbjct: 7 DWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN----KMLN 62
Query: 152 HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR- 210
H N+VK G+ R+ + L E G L + +G+ DA R
Sbjct: 63 HENVVKFYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMP-----------EPDAQRF 109
Query: 211 ------GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRV 264
G+ YLH + HRD K N+LL+ + K++DFGLA L ++
Sbjct: 110 FHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 265 MGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKPVDMSQPSGQE 313
GT YVAPE + DV+S G+VL +L G P D S QE
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 130/301 (43%), Gaps = 46/301 (15%)
Query: 90 EELKEATNN-------FEPASILGEGGFGRVFKGVLS--DGT--AVAIKRLTCG--GQQG 136
+ELKE + F +LG+G FG V + L DG+ VA+K L
Sbjct: 9 DELKEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSD 68
Query: 137 DKEFLVEVEMLSRLHHRNLVKLVGY-YSSRDSSQHLLCYELVP---NGSLESWLHGP-LG 191
+EFL E + H ++ KLVG SR + + ++P +G L ++L +G
Sbjct: 69 IEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIG 128
Query: 192 VN-CHLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAK 250
N +L +T ++ +D A G+ YL S IHRD A N +L + VADFGL++
Sbjct: 129 ENPFNLPLQTLVRFMVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSR 185
Query: 251 QAPEGRTNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDMSQP 309
+ G ++A E V SDV+++GV + E++T G+ P
Sbjct: 186 KIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPY----- 240
Query: 310 SGQENLVTWARPILRDKDRLEELADPRLGG---KYPKEDFIRVCTIAAACVAPEANQRPT 366
+G EN E+ + +GG K P E V + C + + QRP+
Sbjct: 241 AGIEN---------------AEIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPS 285
Query: 367 M 367
Sbjct: 286 F 286
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 65
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGLA+ +
Sbjct: 126 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
+++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 178 EMAGFVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 65
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGLA+ +
Sbjct: 126 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
+++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 178 EMAGFVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 112/239 (46%), Gaps = 28/239 (11%)
Query: 98 NFEPASILGEGGFGRV--FKGVLSDGTAVAIKRL--TCGGQQGDKEFLVEVEMLSRLHHR 153
N+ +G+G F +V + VL+ G VA+K + T ++ EV ++ L+H
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLT-GREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHP 74
Query: 154 NLVKLVGYYSSRDSSQHLLCYELVPNGSLESWL--HGPLGVNCHLDWETRMKIALDAARG 211
N+VKL + + L E G + +L HG + + E R K
Sbjct: 75 NIVKLFEVIETEKTL--YLVMEYASGGEVFDYLVAHGRMK-----EKEARAKFR-QIVSA 126
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYV 271
+ Y H Q ++HRD KA N+LL+ + + K+ADFG + + G N L T G+ Y
Sbjct: 127 VQYCH---QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVG--NKLDT-FCGSPPYA 180
Query: 272 APE-YAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRL 329
APE + + + DV+S GV+L L++G P D GQ NL +LR K R+
Sbjct: 181 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD-----GQ-NLKELRERVLRGKYRI 233
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 19/207 (9%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDK-----EFLVEVEMLSRLHHRNLVKLV 159
LG G FG V KG V + + + E L E ++ +L + +V+++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 160 GYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDS 219
G ++ +L E+ G L +L N H+ + +++ + G+ YL E +
Sbjct: 79 G---ICEAESWMLVMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEESN 131
Query: 220 QPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF--GYVAPEYAM 277
+HRD A N+LL +AK++DFGL+K A N + G + + APE
Sbjct: 132 ---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENXYKAQTHGKWPVKWYAPECIN 187
Query: 278 TGHLLVKSDVYSYGVVLLELLT-GRKP 303
KSDV+S+GV++ E + G+KP
Sbjct: 188 YYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 101/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ D GLA+ +
Sbjct: 126 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDAGLARHTDD 177
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 178 EMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 94/203 (46%), Gaps = 10/203 (4%)
Query: 103 SILGEGGFGRVFKGVLS-DGTAVAIKRLTCGGQQGD-KEFLVEVEMLSRLHHRNLVKLVG 160
S +GEG +G V + + VAIK+++ Q + L E+++L H N++ +
Sbjct: 31 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGIND 90
Query: 161 YYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQ 220
+ Q Y + +E+ L+ L HL + RGL Y+H +
Sbjct: 91 IIRAPTIEQMKDVY--IVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSAN- 146
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQA-PEGRTNYLSTRVMGTFGYVAPEYAMTG 279
V+HRD K SN+LL K+ DFGLA+ A P+ T + T Y APE +
Sbjct: 147 --VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 280 HLLVKS-DVYSYGVVLLELLTGR 301
KS D++S G +L E+L+ R
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 106/225 (47%), Gaps = 24/225 (10%)
Query: 92 LKEATNNFEPASILGEGGFGRVFKG--VLSDGTAVAIKRLTC-GGQQG-DKEFLVEVEML 147
L A +E + +GEG +G+VFK + + G VA+KR+ G++G + EV +L
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 148 SRLH---HRNLVKL--VGYYSSRDSSQHL-LCYELVPNGSLESWLHG--PLGVNCHLDWE 199
L H N+V+L V S D L L +E V + L ++L GV E
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPT----E 120
Query: 200 TRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNY 259
T + RGL +LH V+HRD K NIL+ ++ K+ADFGLA+
Sbjct: 121 TIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQM 174
Query: 260 LSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPV 304
T V+ T Y APE + D++S G + E+ RKP+
Sbjct: 175 ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 2 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 61
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 62 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 121
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGLA+ +
Sbjct: 122 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 173
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
+++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 174 EMAGFVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 101/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ D GLA+ +
Sbjct: 126 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDRGLARHTDD 177
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 178 EMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 103/214 (48%), Gaps = 19/214 (8%)
Query: 97 NNFEPASILGEGGFGRVF---KGVLSDGTAV-AIKRLTCGGQQGDKEFLVEVE--MLSRL 150
+ FE +LG+G FG+VF K SD + A+K L + ++E +L +
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIAL-DAA 209
+H +VKL +Y+ + + L + + G L + L + E +K L + A
Sbjct: 84 NHPFIVKL--HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFT-----EEDVKFYLAELA 136
Query: 210 RGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFG 269
L +LH +I+RD K NILL+ H K+ DFGL+K++ + S GT
Sbjct: 137 LALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVE 191
Query: 270 YVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
Y+APE +D +S+GV++ E+LTG P
Sbjct: 192 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 103/214 (48%), Gaps = 19/214 (8%)
Query: 97 NNFEPASILGEGGFGRVF---KGVLSDGTAV-AIKRLTCGGQQGDKEFLVEVE--MLSRL 150
+ FE +LG+G FG+VF K SD + A+K L + ++E +L +
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 84
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIAL-DAA 209
+H +VKL +Y+ + + L + + G L + L + E +K L + A
Sbjct: 85 NHPFIVKL--HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFT-----EEDVKFYLAELA 137
Query: 210 RGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFG 269
L +LH +I+RD K NILL+ H K+ DFGL+K++ + S GT
Sbjct: 138 LALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVE 192
Query: 270 YVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
Y+APE +D +S+GV++ E+LTG P
Sbjct: 193 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 101/228 (44%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ D GLA+ +
Sbjct: 126 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDGGLARHTDD 177
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
T Y++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 178 EMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 98 NFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLV 156
++ ++G G FG V++ L D G VAIK++ G ++ E++++ +L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR----ELQIMRKLDHCNIV 76
Query: 157 KL-VGYYSS---RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGL 212
+L +YSS +D L + VP H ++ + R L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSL 135
Query: 213 AYLHEDSQPCVIHRDFKASNILLENNFHA-KVADFGLAKQAPEGRTN--YLSTRVMGTFG 269
AY+H + HRD K N+LL+ + K+ DFG AKQ G N Y+ +R
Sbjct: 136 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY----- 187
Query: 270 YVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGR 301
Y APE S DV+S G VL ELL G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 112/239 (46%), Gaps = 28/239 (11%)
Query: 98 NFEPASILGEGGFGRV--FKGVLSDGTAVAIKRL--TCGGQQGDKEFLVEVEMLSRLHHR 153
N+ +G+G F +V + +L+ G VA+K + T ++ EV ++ L+H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 154 NLVKLVGYYSSRDSSQHLLCYELVPNGSLESWL--HGPLGVNCHLDWETRMKIALDAARG 211
N+VKL + + L E G + +L HG + + E R K
Sbjct: 74 NIVKLFEVIETEKTL--YLVMEYASGGEVFDYLVAHGRMK-----EKEARAKFR-QIVSA 125
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYV 271
+ Y H Q ++HRD KA N+LL+ + + K+ADFG + + G N L T G+ Y
Sbjct: 126 VQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFG--NKLDT-FCGSPPYA 179
Query: 272 APE-YAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRL 329
APE + + + DV+S GV+L L++G P D GQ NL +LR K R+
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD-----GQ-NLKELRERVLRGKYRI 232
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 112/239 (46%), Gaps = 28/239 (11%)
Query: 98 NFEPASILGEGGFGRV--FKGVLSDGTAVAIKRL--TCGGQQGDKEFLVEVEMLSRLHHR 153
N+ +G+G F +V + +L+ G VA+K + T ++ EV ++ L+H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 154 NLVKLVGYYSSRDSSQHLLCYELVPNGSLESWL--HGPLGVNCHLDWETRMKIALDAARG 211
N+VKL + + L E G + +L HG + + E R K
Sbjct: 74 NIVKLFEVIETEKTL--YLVMEYASGGEVFDYLVAHGRMK-----EKEARAKFR-QIVSA 125
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYV 271
+ Y H Q ++HRD KA N+LL+ + + K+ADFG + + G N L T G+ Y
Sbjct: 126 VQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFG--NKLDT-FCGSPPYA 179
Query: 272 APE-YAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRL 329
APE + + + DV+S GV+L L++G P D GQ NL +LR K R+
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD-----GQ-NLKELRERVLRGKYRI 232
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 104/213 (48%), Gaps = 32/213 (15%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSR--LHHRNLVKLVGY- 161
+G+G +G V++G G VA+K + + +K + E E+ + L H N++ +
Sbjct: 45 VGKGRYGEVWRGSWQ-GENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASD 100
Query: 162 YSSRDSSQHL-LCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLH---- 216
+SR SS L L GSL +L LD + ++I L A GLA+LH
Sbjct: 101 MTSRHSSTQLWLITHYHEMGSLYDYLQLTT-----LDTVSCLRIVLSIASGLAHLHIEIF 155
Query: 217 -EDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST----RVMGTFGYV 271
+P + HRD K+ NIL++ N +AD GLA + TN L RV GT Y+
Sbjct: 156 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQS-TNQLDVGNNPRV-GTKRYM 213
Query: 272 APEYAMTGHLLV-------KSDVYSYGVVLLEL 297
APE + + V + D++++G+VL E+
Sbjct: 214 APE-VLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 104/213 (48%), Gaps = 32/213 (15%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSR--LHHRNLVKLVGY- 161
+G+G +G V++G G VA+K + + +K + E E+ + L H N++ +
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 162 YSSRDSSQHL-LCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLH---- 216
+SR SS L L GSL +L LD + ++I L A GLA+LH
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTT-----LDTVSCLRIVLSIASGLAHLHIEIF 126
Query: 217 -EDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST----RVMGTFGYV 271
+P + HRD K+ NIL++ N +AD GLA + TN L RV GT Y+
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQS-TNQLDVGNNPRV-GTKRYM 184
Query: 272 APEYAMTGHLLV-------KSDVYSYGVVLLEL 297
APE + + V + D++++G+VL E+
Sbjct: 185 APE-VLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 98 NFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLV 156
++ ++G G FG V++ L D G VAIK++ G ++ E++++ +L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR----ELQIMRKLDHCNIV 76
Query: 157 KL-VGYYSS---RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGL 212
+L +YSS +D L + VP H ++ + R L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSL 135
Query: 213 AYLHEDSQPCVIHRDFKASNILLENNFHA-KVADFGLAKQAPEGRTN--YLSTRVMGTFG 269
AY+H + HRD K N+LL+ + K+ DFG AKQ G N Y+ +R
Sbjct: 136 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY----- 187
Query: 270 YVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGR 301
Y APE S DV+S G VL ELL G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 104/213 (48%), Gaps = 32/213 (15%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSR--LHHRNLVKLVGY- 161
+G+G +G V++G G VA+K + + +K + E E+ + L H N++ +
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 162 YSSRDSSQHL-LCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLH---- 216
+SR SS L L GSL +L LD + ++I L A GLA+LH
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTT-----LDTVSCLRIVLSIASGLAHLHIEIF 126
Query: 217 -EDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLST----RVMGTFGYV 271
+P + HRD K+ NIL++ N +AD GLA + TN L RV GT Y+
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQS-TNQLDVGNNPRV-GTKRYM 184
Query: 272 APEYAMTGHLLV-------KSDVYSYGVVLLEL 297
APE + + V + D++++G+VL E+
Sbjct: 185 APE-VLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 99/218 (45%), Gaps = 20/218 (9%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLS---DGTAVAIKRLTCGGQQGDKE-FLVEVEMLSRL 150
+NFE +LG+G FG+V + D AV + + Q D E + E +LS
Sbjct: 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLA 80
Query: 151 -HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKI-ALDA 208
+H L +L + + D + E V G L + + E R + A +
Sbjct: 81 RNHPFLTQLFCCFQTPD--RLFFVMEFVNGGDLMFHIQKSRRFD-----EARARFYAAEI 133
Query: 209 ARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVM-GT 267
L +LH+ +I+RD K N+LL++ H K+ADFG+ K EG N ++T GT
Sbjct: 134 ISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCK---EGICNGVTTATFCGT 187
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 305
Y+APE D ++ GV+L E+L G P +
Sbjct: 188 PDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFE 225
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 98/214 (45%), Gaps = 24/214 (11%)
Query: 98 NFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFL-VEVEMLSRLHHRNL 155
++ ++G G FG V++ L D G VAIK++ DK F E++++ +L H N+
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-----QDKRFKNRELQIMRKLDHCNI 103
Query: 156 VKL-VGYYSS---RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARG 211
V+L +YSS +D L + VP H ++ + R
Sbjct: 104 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRS 162
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHA-KVADFGLAKQAPEGRTN--YLSTRVMGTF 268
LAY+H + HRD K N+LL+ + K+ DFG AKQ G N Y+ +R
Sbjct: 163 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---- 215
Query: 269 GYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGR 301
Y APE S DV+S G VL ELL G+
Sbjct: 216 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 107/229 (46%), Gaps = 32/229 (13%)
Query: 93 KEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLH 151
KE ++P ++G G V + V + G A+K + ++ E L EV +R
Sbjct: 90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRE 149
Query: 152 ---------HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETR- 201
H +++ L+ Y S SS L ++L+ G L +L + ++ + ETR
Sbjct: 150 THILRQVAGHPHIITLIDSYES--SSFMFLVFDLMRKGELFDYLTEKVALS---EKETRS 204
Query: 202 -MKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYL 260
M+ L+A +++LH ++ ++HRD K NILL++N +++DFG + G
Sbjct: 205 IMRSLLEA---VSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK--- 255
Query: 261 STRVMGTFGYVAPEYAMTGHLLV------KSDVYSYGVVLLELLTGRKP 303
+ GT GY+APE + D+++ GV+L LL G P
Sbjct: 256 LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 120/283 (42%), Gaps = 27/283 (9%)
Query: 98 NFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQGDK---EFLVEVEMLSRLHHR 153
NF +G G F V++ L DG VA+K++ K + + E+++L +L+H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 154 NLVKLVGYYSSRDSSQHL-LCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGL 212
N++K YY+S L + EL G L + + T K + L
Sbjct: 93 NVIK---YYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSAL 149
Query: 213 AYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVA 272
++H V+HRD K +N+ + K+ D GL + T + ++GT Y++
Sbjct: 150 EHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA--AHSLVGTPYYMS 204
Query: 273 PEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRLEEL 332
PE KSD++S G +L E+ + P + NL + + ++E+
Sbjct: 205 PERIHENGYNFKSDIWSLGCLLYEMAALQSPFY----GDKMNLYSLCK-------KIEQC 253
Query: 333 ADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSLK 375
P L + E+ ++ + C+ P+ +RP + V K
Sbjct: 254 DYPPLPSDHYSEELRQLVNM---CINPDPEKRPDVTYVYDVAK 293
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 98/214 (45%), Gaps = 24/214 (11%)
Query: 98 NFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFL-VEVEMLSRLHHRNL 155
++ ++G G FG V++ L D G VAIK++ DK F E++++ +L H N+
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-----QDKRFKNRELQIMRKLDHCNI 111
Query: 156 VKL-VGYYSS---RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARG 211
V+L +YSS +D L + VP H ++ + R
Sbjct: 112 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRS 170
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHA-KVADFGLAKQAPEGRTN--YLSTRVMGTF 268
LAY+H + HRD K N+LL+ + K+ DFG AKQ G N Y+ +R
Sbjct: 171 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---- 223
Query: 269 GYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGR 301
Y APE S DV+S G VL ELL G+
Sbjct: 224 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 98/214 (45%), Gaps = 24/214 (11%)
Query: 98 NFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFL-VEVEMLSRLHHRNL 155
++ ++G G FG V++ L D G VAIK++ DK F E++++ +L H N+
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-----QDKRFKNRELQIMRKLDHCNI 109
Query: 156 VKL-VGYYSS---RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARG 211
V+L +YSS +D L + VP H ++ + R
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRS 168
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHA-KVADFGLAKQAPEGRTN--YLSTRVMGTF 268
LAY+H + HRD K N+LL+ + K+ DFG AKQ G N Y+ +R
Sbjct: 169 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---- 221
Query: 269 GYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGR 301
Y APE S DV+S G VL ELL G+
Sbjct: 222 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 18/207 (8%)
Query: 103 SILGEGGFGRVFKGVLS-DGTAVAIKRLTCGGQQGD-KEFLVEVEMLSRLHHRNLVKLVG 160
S +GEG +G V + + VAIK+++ Q + L E+++L R H N++ +
Sbjct: 49 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 108
Query: 161 YYSSRDSSQHLLCYELVPNGSLESWLHGP----LGVNCHLDWETRMKIALDAARGLAYLH 216
+ Q Y L + L G L HL + RGL Y+H
Sbjct: 109 IIRAPTIEQMKDVY-------LVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIH 161
Query: 217 EDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQA-PEGRTNYLSTRVMGTFGYVAPEY 275
+ V+HRD K SN+LL K+ DFGLA+ A P+ T + T Y APE
Sbjct: 162 SAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 218
Query: 276 AMTGHLLVKS-DVYSYGVVLLELLTGR 301
+ KS D++S G +L E+L+ R
Sbjct: 219 MLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 98/214 (45%), Gaps = 24/214 (11%)
Query: 98 NFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFL-VEVEMLSRLHHRNL 155
++ ++G G FG V++ L D G VAIK++ DK F E++++ +L H N+
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-----QDKRFKNRELQIMRKLDHCNI 113
Query: 156 VKL-VGYYSS---RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARG 211
V+L +YSS +D L + VP H ++ + R
Sbjct: 114 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRS 172
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHA-KVADFGLAKQAPEGRTN--YLSTRVMGTF 268
LAY+H + HRD K N+LL+ + K+ DFG AKQ G N Y+ +R
Sbjct: 173 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---- 225
Query: 269 GYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGR 301
Y APE S DV+S G VL ELL G+
Sbjct: 226 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 114/240 (47%), Gaps = 15/240 (6%)
Query: 105 LGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVK---LVG 160
LG GG G VF V +D VAIK++ Q K L E++++ RL H N+VK ++G
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 161 YYSSRDSSQHLLCYEL----VPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLH 216
S+ + EL + +E+ L L L+ R+ RGL Y+H
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARL-FMYQLLRGLKYIH 137
Query: 217 EDSQPCVIHRDFKASNILLEN-NFHAKVADFGLAK-QAPEGRTNYLSTRVMGTFGYVAPE 274
+ V+HRD K +N+ + + K+ DFGLA+ P + + T Y +P
Sbjct: 138 SAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPR 194
Query: 275 YAMTGHLLVKS-DVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRLEELA 333
++ + K+ D+++ G + E+LTG+ + Q L+ + P++ ++DR E L+
Sbjct: 195 LLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLS 254
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 98/214 (45%), Gaps = 24/214 (11%)
Query: 98 NFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFL-VEVEMLSRLHHRNL 155
++ ++G G FG V++ L D G VAIK++ DK F E++++ +L H N+
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-----QDKRFKNRELQIMRKLDHCNI 154
Query: 156 VKL-VGYYSS---RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARG 211
V+L +YSS +D L + VP H ++ + R
Sbjct: 155 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRS 213
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHA-KVADFGLAKQAPEGRTN--YLSTRVMGTF 268
LAY+H + HRD K N+LL+ + K+ DFG AKQ G N Y+ +R
Sbjct: 214 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---- 266
Query: 269 GYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGR 301
Y APE S DV+S G VL ELL G+
Sbjct: 267 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Query: 105 LGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQ--GDKEFLVEVEMLSRLHHRNLVKLVGY 161
+G G +G V + VA+K+L+ Q + E+ +L L H N++ L+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 162 Y----SSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHE 217
+ S D S+ L L+ L + + + H+ + + RGL Y+H
Sbjct: 96 FTPATSIEDFSEVYLVTTLM-GADLNNIVKSQALSDEHVQF-----LVYQLLRGLKYIH- 148
Query: 218 DSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAM 277
+IHRD K SN+ + + ++ DFGLA+QA E T Y++TR Y APE +
Sbjct: 149 --SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WYRAPEIML 201
Query: 278 TG-HLLVKSDVYSYGVVLLELLTGR 301
H D++S G ++ ELL G+
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 100/205 (48%), Gaps = 24/205 (11%)
Query: 105 LGEGGFGRV---FKGVLSDGTAVAIKRLT--CGGQQGDKEFLVEVEMLSRLHHRNLVKLV 159
+G G G V F VL G VA+K+L+ Q K E+ +L ++H+N++ L+
Sbjct: 32 IGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLL 89
Query: 160 GYYSSRDSSQHL----LCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYL 215
++ + + + L EL+ + +L +H LD E + G+ +L
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIH------MELDHERMSYLLYQMLCGIKHL 142
Query: 216 HEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEY 275
H +IHRD K SNI+++++ K+ DFGLA+ A TN++ T + T Y APE
Sbjct: 143 HSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAC---TNFMMTPYVVTRYYRAPEV 196
Query: 276 AMTGHLLVKSDVYSYGVVLLELLTG 300
+ D++S G ++ EL+ G
Sbjct: 197 ILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 101/224 (45%), Gaps = 40/224 (17%)
Query: 98 NFEPASILGEGGFGRV-FKGVLSDGTAVAIK-----RLTCGGQQGDKEFLVEVEMLSRLH 151
N++ LGEG FG+V + G VA+K L QG E E+ L L
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 71
Query: 152 HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR- 210
H +++KL S+D + ++ E N + + R K++ AR
Sbjct: 72 HPHIIKLYDVIKSKD--EIIMVIEYAGNELFDYIVQ-------------RDKMSEQEARR 116
Query: 211 -------GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTR 263
+ Y H ++HRD K N+LL+ + + K+ADFGL+ +G N+L T
Sbjct: 117 FFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG--NFLKTS 171
Query: 264 VMGTFGYVAPEYAMTGHLLV--KSDVYSYGVVLLELLTGRKPVD 305
G+ Y APE ++G L + DV+S GV+L +L R P D
Sbjct: 172 C-GSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 98/214 (45%), Gaps = 24/214 (11%)
Query: 98 NFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFL-VEVEMLSRLHHRNL 155
++ ++G G FG V++ L D G VAIK++ DK F E++++ +L H N+
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-----QDKRFKNRELQIMRKLDHCNI 88
Query: 156 VKL-VGYYSS---RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARG 211
V+L +YSS +D L + VP H ++ + R
Sbjct: 89 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRS 147
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHA-KVADFGLAKQAPEGRTN--YLSTRVMGTF 268
LAY+H + HRD K N+LL+ + K+ DFG AKQ G N Y+ +R
Sbjct: 148 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---- 200
Query: 269 GYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGR 301
Y APE S DV+S G VL ELL G+
Sbjct: 201 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 101/224 (45%), Gaps = 40/224 (17%)
Query: 98 NFEPASILGEGGFGRV-FKGVLSDGTAVAIK-----RLTCGGQQGDKEFLVEVEMLSRLH 151
N++ LGEG FG+V + G VA+K L QG E E+ L L
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 72
Query: 152 HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR- 210
H +++KL S+D + ++ E N + + R K++ AR
Sbjct: 73 HPHIIKLYDVIKSKD--EIIMVIEYAGNELFDYIVQ-------------RDKMSEQEARR 117
Query: 211 -------GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTR 263
+ Y H ++HRD K N+LL+ + + K+ADFGL+ +G N+L T
Sbjct: 118 FFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG--NFLKTS 172
Query: 264 VMGTFGYVAPEYAMTGHLLV--KSDVYSYGVVLLELLTGRKPVD 305
G+ Y APE ++G L + DV+S GV+L +L R P D
Sbjct: 173 C-GSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 102/222 (45%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSR-LHHRN 154
+ FE +G G FGRV + G A+K L DK+ +V+++ + L+ +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + +S +D+S + E VP G + S L + + R A
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR---IGRFSEPHARF-YAAQ 149
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N+L++ + KVADFG AK+ +GRT L GT
Sbjct: 150 IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAKRV-KGRTWXLC----GT 201
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+APE ++ D ++ GV++ E+ G P QP
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 98/214 (45%), Gaps = 24/214 (11%)
Query: 98 NFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFL-VEVEMLSRLHHRNL 155
++ ++G G FG V++ L D G VAIK++ DK F E++++ +L H N+
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-----QDKRFKNRELQIMRKLDHCNI 80
Query: 156 VKL-VGYYSS---RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARG 211
V+L +YSS +D L + VP H ++ + R
Sbjct: 81 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRS 139
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHA-KVADFGLAKQAPEGRTN--YLSTRVMGTF 268
LAY+H + HRD K N+LL+ + K+ DFG AKQ G N Y+ +R
Sbjct: 140 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---- 192
Query: 269 GYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGR 301
Y APE S DV+S G VL ELL G+
Sbjct: 193 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 101/224 (45%), Gaps = 40/224 (17%)
Query: 98 NFEPASILGEGGFGRV-FKGVLSDGTAVAIK-----RLTCGGQQGDKEFLVEVEMLSRLH 151
N++ LGEG FG+V + G VA+K L QG E E+ L L
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 62
Query: 152 HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR- 210
H +++KL S+D + ++ E N + + R K++ AR
Sbjct: 63 HPHIIKLYDVIKSKD--EIIMVIEYAGNELFDYIVQ-------------RDKMSEQEARR 107
Query: 211 -------GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTR 263
+ Y H ++HRD K N+LL+ + + K+ADFGL+ +G N+L T
Sbjct: 108 FFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG--NFLKTS 162
Query: 264 VMGTFGYVAPEYAMTGHLLV--KSDVYSYGVVLLELLTGRKPVD 305
G+ Y APE ++G L + DV+S GV+L +L R P D
Sbjct: 163 C-GSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 105 LGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQ--GDKEFLVEVEMLSRLHHRNLVKLVGY 161
+G G +G V + VA+K+L+ Q + E+ +L L H N++ L+
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 87
Query: 162 YSSRDSSQHLLCYELVPNGSLESWLHGPLG--VNCH-LDWETRMKIALDAARGLAYLHED 218
++ S + LV + + L V C L E + RGL Y+H
Sbjct: 88 FTPATSIEDFSEVYLV-----TTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSA 142
Query: 219 SQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMT 278
+IHRD K SN+ + + ++ DFGLA+QA E T Y++TR Y APE +
Sbjct: 143 G---IIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR-----WYRAPEIMLN 194
Query: 279 G-HLLVKSDVYSYGVVLLELLTGR 301
H D++S G ++ ELL G+
Sbjct: 195 WMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 112/239 (46%), Gaps = 28/239 (11%)
Query: 98 NFEPASILGEGGFGRV--FKGVLSDGTAVAIKRL--TCGGQQGDKEFLVEVEMLSRLHHR 153
N+ +G+G F +V + +L+ G VA++ + T ++ EV ++ L+H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 154 NLVKLVGYYSSRDSSQHLLCYELVPNGSLESWL--HGPLGVNCHLDWETRMKIALDAARG 211
N+VKL + + L E G + +L HG + + E R K
Sbjct: 74 NIVKLFEVIETEKTL--YLVMEYASGGEVFDYLVAHGRMK-----EKEARAKFR-QIVSA 125
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYV 271
+ Y H Q ++HRD KA N+LL+ + + K+ADFG + + G N L T G+ Y
Sbjct: 126 VQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFG--NKLDT-FCGSPPYA 179
Query: 272 APE-YAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRL 329
APE + + + DV+S GV+L L++G P D GQ NL +LR K R+
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD-----GQ-NLKELRERVLRGKYRI 232
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 101/224 (45%), Gaps = 40/224 (17%)
Query: 98 NFEPASILGEGGFGRV-FKGVLSDGTAVAIK-----RLTCGGQQGDKEFLVEVEMLSRLH 151
N++ LGEG FG+V + G VA+K L QG E E+ L L
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 66
Query: 152 HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR- 210
H +++KL S+D + ++ E N + + R K++ AR
Sbjct: 67 HPHIIKLYDVIKSKD--EIIMVIEYAGNELFDYIVQ-------------RDKMSEQEARR 111
Query: 211 -------GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTR 263
+ Y H ++HRD K N+LL+ + + K+ADFGL+ +G N+L T
Sbjct: 112 FFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG--NFLKTS 166
Query: 264 VMGTFGYVAPEYAMTGHLLV--KSDVYSYGVVLLELLTGRKPVD 305
G+ Y APE ++G L + DV+S GV+L +L R P D
Sbjct: 167 C-GSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 112/239 (46%), Gaps = 28/239 (11%)
Query: 98 NFEPASILGEGGFGRV--FKGVLSDGTAVAIKRL--TCGGQQGDKEFLVEVEMLSRLHHR 153
N+ +G+G F +V + +L+ G VA+K + T ++ EV ++ L+H
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 66
Query: 154 NLVKLVGYYSSRDSSQHLLCYELVPNGSLESWL--HGPLGVNCHLDWETRMKIALDAARG 211
N+VKL + + L E G + +L HG + + E R K
Sbjct: 67 NIVKLFEVIETEKTL--YLVMEYASGGEVFDYLVAHGWMK-----EKEARAKFR-QIVSA 118
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYV 271
+ Y H Q ++HRD KA N+LL+ + + K+ADFG + + G N L T G+ Y
Sbjct: 119 VQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFG--NKLDT-FCGSPPYA 172
Query: 272 APE-YAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRL 329
APE + + + DV+S GV+L L++G P D GQ NL +LR K R+
Sbjct: 173 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD-----GQ-NLKELRERVLRGKYRI 225
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 107/234 (45%), Gaps = 25/234 (10%)
Query: 79 PHPTSTRFLAYEELKEATNNFEPAS---ILGEGGFGRVFK-GVLSDGTAVAIKRLTCGGQ 134
P P R + ++ A N+F S ILG G FG+V K + G +A K + G
Sbjct: 70 PAPFDHRIVTAKQ--GAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGM 127
Query: 135 QGDKEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNC 194
+ +E E+ ++++L H NL++L + S++ +L E V G L +
Sbjct: 128 KDKEEVKNEISVMNQLDHANLIQLYDAFESKNDI--VLVMEYVDGGELFDRIIDESYNLT 185
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENN--FHAKVADFGLAKQA 252
LD MK G+ ++H Q ++H D K NIL N K+ DFGLA++
Sbjct: 186 ELDTILFMK---QICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRY 239
Query: 253 P---EGRTNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
+ + N+ GT ++APE + +D++S GV+ LL+G P
Sbjct: 240 KPREKLKVNF------GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSP 287
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 24/215 (11%)
Query: 105 LGEGGFGRVFK----GVLSDGT--AVAIKRLTCGGQQGD-KEFLVEVEMLSRL-HHRNLV 156
LG G FG+V + G+ T VA+K L G + + + E+++L + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 157 KLVGYYSSRDSSQHLLCYELVPNGSLESWLHG------PLGV------NCHLDWETRMKI 204
L+G ++ ++ E G+L ++L P V L E +
Sbjct: 95 NLLGA-CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153
Query: 205 ALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRV 264
+ A+G+ +L S+ C IHRD A NILL K+ DFGLA+ +
Sbjct: 154 SFQVAKGMEFLA--SRKC-IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 265 MGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
++APE ++SDV+S+GV+L E+ +
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 102/229 (44%), Gaps = 36/229 (15%)
Query: 96 TNNFEPASILGEGGFGRVFKGVLS-DGTAVAIKRLTCGGQQGDKEF-----LVEVEMLSR 149
+++F+ S+LGEG +G V G VAIK++ + DK L E+++L
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI----EPFDKPLFALRTLREIKILKH 65
Query: 150 LHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAA 209
H N++ + R S + +++ LH + D + I
Sbjct: 66 FKHENIITIFNI--QRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI-YQTL 122
Query: 210 RGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE-------------GR 256
R + LH + VIHRD K SN+L+ +N KV DFGLA+ E G
Sbjct: 123 RAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM 179
Query: 257 TNYLSTRVMGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKPV 304
T Y++TR Y APE +T ++ DV+S G +L EL R+P+
Sbjct: 180 TEYVATR-----WYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 98/214 (45%), Gaps = 24/214 (11%)
Query: 98 NFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFL-VEVEMLSRLHHRNL 155
++ ++G G FG V++ L D G VAIK++ DK F E++++ +L H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-----QDKRFKNRELQIMRKLDHCNI 75
Query: 156 VKL-VGYYSS---RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARG 211
V+L +YSS +D L + VP H ++ + R
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRS 134
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHA-KVADFGLAKQAPEGRTN--YLSTRVMGTF 268
LAY+H + HRD K N+LL+ + K+ DFG AKQ G N Y+ +R
Sbjct: 135 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---- 187
Query: 269 GYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGR 301
Y APE S DV+S G VL ELL G+
Sbjct: 188 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 128/313 (40%), Gaps = 52/313 (16%)
Query: 97 NNFEPASILGEGGFGRVFKGVL------SDGTAVAIKRLTCGGQQGD-KEFLVEVEMLSR 149
N LGEG FG+V K + T VA+K L + ++ L E +L +
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 150 LHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH-----GP-------LGVNCHLD 197
++H +++KL G S LL E GSL +L GP + LD
Sbjct: 83 VNHPHVIKLYGACSQ--DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLD 140
Query: 198 WETR--------MKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLA 249
+ A ++G+ YL E S ++HRD A NIL+ K++DFGL+
Sbjct: 141 HPDERALTMGDLISFAWQISQGMQYLAEMS---LVHRDLAARNILVAEGRKMKISDFGLS 197
Query: 250 KQAPEGRTNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDMSQ 308
+ E + ++ ++A E +SDV+S+GV+L E++T G P
Sbjct: 198 RDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP 257
Query: 309 PSGQENLVTWARPILRDKDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMG 368
P NL+ + R + EE+ + C E ++RP
Sbjct: 258 PERLFNLLKTGHRMERPDNCSEEM-----------------YRLMLQCWKQEPDKRPVFA 300
Query: 369 EVVQSLK--MVQR 379
++ + L+ MV+R
Sbjct: 301 DISKDLEKMMVKR 313
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 20/228 (8%)
Query: 81 PTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQ--GD 137
PT R + + E ++ S +G G +G V G VA+K+L+ Q
Sbjct: 26 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 85
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN---GSLESWLHGPLGVNC 194
K E+ +L + H N++ L+ ++ S + LV + L + + +
Sbjct: 86 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 145
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
H+ + + RGL Y+H +IHRD K SN+ + + K+ DFGLA+ +
Sbjct: 146 HVQF-----LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 197
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR 301
++TR Y APE + H D++S G ++ ELLTGR
Sbjct: 198 EMXGXVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 100/205 (48%), Gaps = 24/205 (11%)
Query: 105 LGEGGFGRV---FKGVLSDGTAVAIKRLT--CGGQQGDKEFLVEVEMLSRLHHRNLVKLV 159
+G G G V F VL G VA+K+L+ Q K E+ +L ++H+N++ L+
Sbjct: 30 IGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLL 87
Query: 160 GYYSSRDSSQHL----LCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYL 215
++ + + + L EL+ + +L +H LD E + G+ +L
Sbjct: 88 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIH------MELDHERMSYLLYQMLCGIKHL 140
Query: 216 HEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEY 275
H +IHRD K SNI+++++ K+ DFGLA+ A TN++ T + T Y APE
Sbjct: 141 HSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---STNFMMTPYVVTRYYRAPEV 194
Query: 276 AMTGHLLVKSDVYSYGVVLLELLTG 300
+ D++S G ++ EL+ G
Sbjct: 195 ILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 102/230 (44%), Gaps = 34/230 (14%)
Query: 99 FEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQGD--KEFLVEVEMLSRLH-HRN 154
+E LG+G +G V+K + G VA+K++ Q + E+ +L+ L H N
Sbjct: 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHEN 70
Query: 155 LVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAY 214
+V L+ + + L ++ +E+ LH + N L+ + + + + Y
Sbjct: 71 IVNLLNVLRADNDRDVYLVFDY-----METDLHAVIRANI-LEPVHKQYVVYQLIKVIKY 124
Query: 215 LHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAK--------------QAPEGRTNY- 259
LH ++HRD K SNILL H KVADFGL++ E N+
Sbjct: 125 LHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFD 181
Query: 260 ----LSTRVMGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKPV 304
+ T + T Y APE + K D++S G +L E+L G KP+
Sbjct: 182 DDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG-KPI 230
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 82/168 (48%), Gaps = 21/168 (12%)
Query: 143 EVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGS-LESWLHGPLGVNCHLDWETR 201
E+ +L +L H N+VKLV + + +ELV G +E PL + + R
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSED-----QAR 140
Query: 202 MKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLS 261
D +G+ YLH +IHRD K SN+L+ + H K+ADFG++ + +G LS
Sbjct: 141 FYFQ-DLIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVSNEF-KGSDALLS 195
Query: 262 TRVMGTFGYVAPE------YAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
V GT ++APE +G L DV++ GV L + G+ P
Sbjct: 196 NTV-GTPAFMAPESLSETRKIFSGKAL---DVWAMGVTLYCFVFGQCP 239
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 99 FEPASILGEGGFGRVFKGVLSD----GTAVAIKRLTCGGQQGDKEFLV-EVEMLSRLHHR 153
FE LG G F V VL++ G A+K + +G + + E+ +L ++ H
Sbjct: 24 FEFKETLGTGAFSEV---VLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHE 80
Query: 154 NLVKLVGYYSSRDSSQHL-LCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGL 212
N+V L Y +S HL L +LV G L + G D T ++ LDA +
Sbjct: 81 NIVALEDIY---ESPNHLYLVMQLVSGGELFDRIVEK-GFYTEKDASTLIRQVLDA---V 133
Query: 213 AYLHEDSQPCVIHRDFKASNILL---ENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFG 269
YLH + ++HRD K N+L + ++DFGL+K EG+ + +ST GT G
Sbjct: 134 YYLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM--EGKGDVMST-ACGTPG 187
Query: 270 YVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
YVAPE D +S GV+ LL G P
Sbjct: 188 YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 221
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 24/215 (11%)
Query: 105 LGEGGFGRVFK----GVLSDGT--AVAIKRLTCGGQQGD-KEFLVEVEMLSRL-HHRNLV 156
LG G FG+V + G+ T VA+K L G + + + E+++L + HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 157 KLVGYYSSRDSSQHLLCYELVPNGSLESWLHG------PLGV------NCHLDWETRMKI 204
L+G ++ ++ E G+L ++L P V L E +
Sbjct: 86 NLLGA-CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 205 ALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRV 264
+ A+G+ +L S+ C IHRD A NILL K+ DFGLA+ +
Sbjct: 145 SFQVAKGMEFLA--SRKC-IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 201
Query: 265 MGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
++APE ++SDV+S+GV+L E+ +
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 105 LGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQ--GDKEFLVEVEMLSRLHHRNLVKLVGY 161
+G G +G V + VA+K+L+ Q + E+ +L L H N++ L+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 162 YSSRDSSQHLLCYELVPNGSLESWLHGPLG--VNCH-LDWETRMKIALDAARGLAYLHED 218
++ S + LV + + L V C L E + RGL Y+H
Sbjct: 96 FTPATSIEDFSEVYLVT-----TLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSA 150
Query: 219 SQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMT 278
+IHRD K SN+ + + ++ DFGLA+QA E T Y++TR Y APE +
Sbjct: 151 G---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WYRAPEIMLN 202
Query: 279 G-HLLVKSDVYSYGVVLLELLTGR 301
H D++S G ++ ELL G+
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 24/215 (11%)
Query: 105 LGEGGFGRVFK----GVLSDGT--AVAIKRLTCGGQQGD-KEFLVEVEMLSRL-HHRNLV 156
LG G FG+V + G+ T VA+K L G + + + E+++L + HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 157 KLVGYYSSRDSSQHLLCYELVPNGSLESWLHG------PLGV------NCHLDWETRMKI 204
L+G ++ ++ E G+L ++L P V L E +
Sbjct: 86 NLLGA-CTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 205 ALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRV 264
+ A+G+ +L S+ C IHRD A NILL K+ DFGLA+ +
Sbjct: 145 SFQVAKGMEFLA--SRKC-IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 201
Query: 265 MGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
++APE ++SDV+S+GV+L E+ +
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 24/215 (11%)
Query: 105 LGEGGFGRVFK----GVLSDGT--AVAIKRLTCGGQQGD-KEFLVEVEMLSRL-HHRNLV 156
LG G FG+V + G+ T VA+K L G + + + E+++L + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 157 KLVGYYSSRDSSQHLLCYELVPNGSLESWLHG------PLGV------NCHLDWETRMKI 204
L+G ++ ++ E G+L ++L P V L E +
Sbjct: 95 NLLGA-CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153
Query: 205 ALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRV 264
+ A+G+ +L S+ C IHRD A NILL K+ DFGLA+ +
Sbjct: 154 SFQVAKGMEFLA--SRKC-IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDA 210
Query: 265 MGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
++APE ++SDV+S+GV+L E+ +
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 93/222 (41%), Gaps = 30/222 (13%)
Query: 97 NNFEPASILGEGGFGRVFKGVLS-DGTAVAIKRLTCGGQ--QGDKEFLVEVEMLSRLHHR 153
+ +E +G G +G V G VAIK++ K L E+++L H
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 114
Query: 154 NLVKLVGYYSSRDSSQHLLCYELVPNGS----------LESWLHGPLGVNCHLDWETRMK 203
N++ + +D + VP G +ES LH + + L E
Sbjct: 115 NIIAI------KD-----ILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRY 163
Query: 204 IALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQ--APEGRTNYLS 261
RGL Y+H VIHRD K SN+L+ N K+ DFG+A+ Y
Sbjct: 164 FLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFM 220
Query: 262 TRVMGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRK 302
T + T Y APE ++ H ++ D++S G + E+L R+
Sbjct: 221 TEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 24/215 (11%)
Query: 105 LGEGGFGRVFK----GVLSDGT--AVAIKRLTCGGQQGD-KEFLVEVEMLSRL-HHRNLV 156
LG G FG+V + G+ T VA+K L G + + + E+++L + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 157 KLVGYYSSRDSSQHLLCYELVPNGSLESWLHG------PLGV------NCHLDWETRMKI 204
L+G ++ ++ E G+L ++L P V L E +
Sbjct: 95 NLLGA-CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153
Query: 205 ALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRV 264
+ A+G+ +L S+ C IHRD A NILL K+ DFGLA+ +
Sbjct: 154 SFQVAKGMEFLA--SRKC-IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 210
Query: 265 MGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
++APE ++SDV+S+GV+L E+ +
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 17/202 (8%)
Query: 105 LGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQGDKEFLV-EVEMLSRLHHRNLVKLVGYY 162
+G+G G V+ + ++ G VAI+++ QQ KE ++ E+ ++ + N+V + Y
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQ-QQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 163 SSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPC 222
D + + E + GSL + +D + + + L +LH +
Sbjct: 87 LVGD--ELWVVMEYLAGGSLTDVV-----TETCMDEGQIAAVCRECLQALEFLHSNQ--- 136
Query: 223 VIHRDFKASNILLENNFHAKVADFGLAKQ-APEGRTNYLSTRVMGTFGYVAPEYAMTGHL 281
VIHRD K+ NILL + K+ DFG Q PE + ++GT ++APE
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---SEMVGTPYWMAPEVVTRKAY 193
Query: 282 LVKSDVYSYGVVLLELLTGRKP 303
K D++S G++ +E++ G P
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 23/214 (10%)
Query: 105 LGEGGFGRVFK----GVLSDGT--AVAIKRLTCGGQQGD-KEFLVEVEMLSRL-HHRNLV 156
LG G FG+V + G+ T VA+K L G + + + E+++L + HH N+V
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 157 KLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLG-----------VNCHLDWETRMKIA 205
L+G ++ ++ E G+L ++L L E + +
Sbjct: 96 NLLGA-CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYS 154
Query: 206 LDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVM 265
A+G+ +L S+ C IHRD A NILL K+ DFGLA+ +
Sbjct: 155 FQVAKGMEFLA--SRKC-IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 266 GTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
++APE ++SDV+S+GV+L E+ +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 24/215 (11%)
Query: 105 LGEGGFGRVFK----GVLSDGT--AVAIKRLTCGGQQGD-KEFLVEVEMLSRL-HHRNLV 156
LG G FG+V + G+ T VA+K L G + + + E+++L + HH N+V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 157 KLVGYYSSRDSSQHLLCYELVPNGSLESWLHG------PLGV------NCHLDWETRMKI 204
L+G ++ ++ E G+L ++L P V L E +
Sbjct: 132 NLLGA-CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 190
Query: 205 ALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRV 264
+ A+G+ +L S+ C IHRD A NILL K+ DFGLA+ +
Sbjct: 191 SFQVAKGMEFLA--SRKC-IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 247
Query: 265 MGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
++APE ++SDV+S+GV+L E+ +
Sbjct: 248 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 96/211 (45%), Gaps = 18/211 (8%)
Query: 98 NFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLV 156
++ ++G G FG V++ L D G VAIK++ G ++ E++++ +L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR----ELQIMRKLDHCNIV 76
Query: 157 KL-VGYYSS---RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGL 212
+L +YSS +D L + VP H ++ + R L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSL 135
Query: 213 AYLHEDSQPCVIHRDFKASNILLENNFHA-KVADFGLAKQAPEGRTNYLSTRVMGTFGYV 271
AY+H + HRD K N+LL+ + K+ DFG AKQ G N + + Y
Sbjct: 136 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYR 189
Query: 272 APEYAMTGHLLVKS-DVYSYGVVLLELLTGR 301
APE S DV+S G VL ELL G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 96/212 (45%), Gaps = 20/212 (9%)
Query: 98 NFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFL-VEVEMLSRLHHRNL 155
++ ++G G FG V++ L D G VAIK++ DK F E++++ +L H N+
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-----QDKRFKNRELQIMRKLDHCNI 109
Query: 156 VKL-VGYYSS---RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARG 211
V+L +YSS +D L + VP H ++ + R
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRS 168
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHA-KVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
LAY+H + HRD K N+LL+ + K+ DFG AKQ G N + + Y
Sbjct: 169 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYY 222
Query: 271 VAPEYAMTGHLLVKS-DVYSYGVVLLELLTGR 301
APE S DV+S G VL ELL G+
Sbjct: 223 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 102/222 (45%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSR-LHHRN 154
+ FE +G G FGRV + G A+K L DK+ +V+++ + L+ +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + +S +D+S + E +P G + S L + + R A
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRR---IGRFSEPHARF-YAAQ 149
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N+L++ + KVADFG AK+ +GRT L GT
Sbjct: 150 IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAKRV-KGRTWXLC----GT 201
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+APE ++ D ++ GV++ E+ G P QP
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 102/222 (45%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSR-LHHRN 154
+ FE +G G FGRV + G A+K L DK+ +V+++ + L+ +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + +S +D+S + E +P G + S L + + R A
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRR---IGRFSEPHARF-YAAQ 149
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N+L++ + KVADFG AK+ +GRT L GT
Sbjct: 150 IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAKRV-KGRTWXLC----GT 201
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+APE ++ D ++ GV++ E+ G P QP
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 110/239 (46%), Gaps = 28/239 (11%)
Query: 98 NFEPASILGEGGFGRV--FKGVLSDGTAVAIKRL--TCGGQQGDKEFLVEVEMLSRLHHR 153
N+ +G+G F +V + +L+ G VA+K + T ++ EV ++ L+H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 154 NLVKLVGYYSSRDSSQHLLCYELVPNGSLESWL--HGPLGVNCHLDWETRMKIALDAARG 211
N+VKL + + L E G + +L HG + + E R K
Sbjct: 74 NIVKLFEVIETEKTL--YLVMEYASGGEVFDYLVAHGRMK-----EKEARAKFR-QIVSA 125
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYV 271
+ Y H Q ++HRD KA N+LL+ + + K+ADFG + + G N L G Y
Sbjct: 126 VQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFG--NKLDA-FCGAPPYA 179
Query: 272 APE-YAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRL 329
APE + + + DV+S GV+L L++G P D GQ NL +LR K R+
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD-----GQ-NLKELRERVLRGKYRI 232
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSR-LHHRN 154
+ FE LG G FGRV + G A+K L DK+ +V+++ + L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + +S +D+S + E VP G + S L + + R A
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR---IGRFXEPHARF-YAAQ 149
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N+L++ + +V DFG AK+ +GRT L GT
Sbjct: 150 IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC----GT 201
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+APE ++ D ++ GV++ E+ G P QP
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 93/222 (41%), Gaps = 30/222 (13%)
Query: 97 NNFEPASILGEGGFGRVFKGVLS-DGTAVAIKRLTCGGQ--QGDKEFLVEVEMLSRLHHR 153
+ +E +G G +G V G VAIK++ K L E+++L H
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 113
Query: 154 NLVKLVGYYSSRDSSQHLLCYELVPNGS----------LESWLHGPLGVNCHLDWETRMK 203
N++ + +D + VP G +ES LH + + L E
Sbjct: 114 NIIAI------KD-----ILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRY 162
Query: 204 IALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQ--APEGRTNYLS 261
RGL Y+H VIHRD K SN+L+ N K+ DFG+A+ Y
Sbjct: 163 FLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFM 219
Query: 262 TRVMGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRK 302
T + T Y APE ++ H ++ D++S G + E+L R+
Sbjct: 220 TEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 17/202 (8%)
Query: 105 LGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQGDKEFLV-EVEMLSRLHHRNLVKLVGYY 162
+G+G G V+ + ++ G VAI+++ QQ KE ++ E+ ++ + N+V + Y
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQ-QQPKKELIINEILVMRENKNPNIVNYLDSY 87
Query: 163 SSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPC 222
D + + E + GSL + +D + + + L +LH +
Sbjct: 88 LVGD--ELWVVMEYLAGGSLTDVV-----TETCMDEGQIAAVCRECLQALEFLHSNQ--- 137
Query: 223 VIHRDFKASNILLENNFHAKVADFGLAKQ-APEGRTNYLSTRVMGTFGYVAPEYAMTGHL 281
VIHRD K+ NILL + K+ DFG Q PE + ++GT ++APE
Sbjct: 138 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---SXMVGTPYWMAPEVVTRKAY 194
Query: 282 LVKSDVYSYGVVLLELLTGRKP 303
K D++S G++ +E++ G P
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 17/202 (8%)
Query: 105 LGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQGDKEFLV-EVEMLSRLHHRNLVKLVGYY 162
+G+G G V+ + ++ G VAI+++ QQ KE ++ E+ ++ + N+V + Y
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQ-QQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 163 SSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPC 222
D + + E + GSL + +D + + + L +LH +
Sbjct: 87 LVGD--ELWVVMEYLAGGSLTDVV-----TETCMDEGQIAAVCRECLQALEFLHSNQ--- 136
Query: 223 VIHRDFKASNILLENNFHAKVADFGLAKQ-APEGRTNYLSTRVMGTFGYVAPEYAMTGHL 281
VIHRD K+ NILL + K+ DFG Q PE + ++GT ++APE
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---SXMVGTPYWMAPEVVTRKAY 193
Query: 282 LVKSDVYSYGVVLLELLTGRKP 303
K D++S G++ +E++ G P
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSR-LHHRN 154
+ FE LG G FGRV + G A+K L DK+ +V+++ + L+ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 94
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + +S +D+S + E VP G + S L + + R A
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR---IGRFXEPHARF-YAAQ 150
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N+L++ + +V DFG AK+ +GRT L GT
Sbjct: 151 IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC----GT 202
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+APE ++ D ++ GV++ E+ G P QP
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSR-LHHRN 154
+ FE LG G FGRV + G A+K L DK+ +V+++ + L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + +S +D+S + E VP G + S L + + R A
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR---IGRFXEPHARF-YAAQ 149
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N+L++ + +V DFG AK+ +GRT L GT
Sbjct: 150 IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC----GT 201
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+APE ++ D ++ GV++ E+ G P QP
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 17/202 (8%)
Query: 105 LGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQGDKEFLV-EVEMLSRLHHRNLVKLVGYY 162
+G+G G V+ + ++ G VAI+++ QQ KE ++ E+ ++ + N+V + Y
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQ-QQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 163 SSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPC 222
D + + E + GSL + +D + + + L +LH +
Sbjct: 87 LVGD--ELWVVMEYLAGGSLTDVV-----TETCMDEGQIAAVCRECLQALEFLHSNQ--- 136
Query: 223 VIHRDFKASNILLENNFHAKVADFGLAKQ-APEGRTNYLSTRVMGTFGYVAPEYAMTGHL 281
VIHRD K+ NILL + K+ DFG Q PE + ++GT ++APE
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---STMVGTPYWMAPEVVTRKAY 193
Query: 282 LVKSDVYSYGVVLLELLTGRKP 303
K D++S G++ +E++ G P
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 24/215 (11%)
Query: 105 LGEGGFGRVFK----GVLSDGT--AVAIKRLTCGGQQGD-KEFLVEVEMLSRL-HHRNLV 156
LG G FG+V + G+ T VA+K L G + + + E+++L + HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 157 KLVGYYSSRDSSQHLLCYELVPNGSLESWLHG------PLGV------NCHLDWETRMKI 204
L+G ++ ++ E G+L ++L P V L E +
Sbjct: 86 NLLGA-CTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 205 ALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRV 264
+ A+G+ +L S+ C IHRD A NILL K+ DFGLA+ +
Sbjct: 145 SFQVAKGMEFLA--SRKC-IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 201
Query: 265 MGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
++APE ++SDV+S+GV+L E+ +
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 96/212 (45%), Gaps = 20/212 (9%)
Query: 98 NFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFL-VEVEMLSRLHHRNL 155
++ ++G G FG V++ L D G VAIK++ DK F E++++ +L H N+
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-----QDKRFKNRELQIMRKLDHCNI 83
Query: 156 VKL-VGYYSS---RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARG 211
V+L +YSS +D L + VP H ++ + R
Sbjct: 84 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRS 142
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHA-KVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
LAY+H + HRD K N+LL+ + K+ DFG AKQ G N + + Y
Sbjct: 143 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYY 196
Query: 271 VAPEYAMTGHLLVKS-DVYSYGVVLLELLTGR 301
APE S DV+S G VL ELL G+
Sbjct: 197 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 108/226 (47%), Gaps = 35/226 (15%)
Query: 98 NFEPASILGEGGFGRVFKGVLSDGT----AVAIKRLTCGGQQGDKEF-------LVEVEM 146
N+EP ILG G V + + T AV I +T GG +E L EV++
Sbjct: 5 NYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 147 LSRLH-HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETR--MK 203
L ++ H N+++L Y + ++ L ++L+ G L +L + ++ + ETR M+
Sbjct: 64 LRKVSGHPNIIQLKDTYET--NTFFFLVFDLMKKGELFDYLTEKVTLS---EKETRKIMR 118
Query: 204 IALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTR 263
L+ L L+ ++HRD K NILL+++ + K+ DFG + Q G
Sbjct: 119 ALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK---LRE 169
Query: 264 VMGTFGYVAPEY---AMTGH---LLVKSDVYSYGVVLLELLTGRKP 303
V GT Y+APE +M + + D++S GV++ LL G P
Sbjct: 170 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 96/212 (45%), Gaps = 20/212 (9%)
Query: 98 NFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFL-VEVEMLSRLHHRNL 155
++ ++G G FG V++ L D G VAIK++ DK F E++++ +L H N+
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-----QDKRFKNRELQIMRKLDHCNI 94
Query: 156 VKL-VGYYSS---RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARG 211
V+L +YSS +D L + VP H ++ + R
Sbjct: 95 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRS 153
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHA-KVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
LAY+H + HRD K N+LL+ + K+ DFG AKQ G N + + Y
Sbjct: 154 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYY 207
Query: 271 VAPEYAMTGHLLVKS-DVYSYGVVLLELLTGR 301
APE S DV+S G VL ELL G+
Sbjct: 208 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 108/226 (47%), Gaps = 35/226 (15%)
Query: 98 NFEPASILGEGGFGRVFKGVLSDGT----AVAIKRLTCGGQQGDKEF-------LVEVEM 146
N+EP ILG G V + + T AV I +T GG +E L EV++
Sbjct: 18 NYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 147 LSRLH-HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETR--MK 203
L ++ H N+++L Y + ++ L ++L+ G L +L + ++ + ETR M+
Sbjct: 77 LRKVSGHPNIIQLKDTYET--NTFFFLVFDLMKKGELFDYLTEKVTLS---EKETRKIMR 131
Query: 204 IALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTR 263
L+ L L+ ++HRD K NILL+++ + K+ DFG + Q G
Sbjct: 132 ALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK---LRE 182
Query: 264 VMGTFGYVAPEY---AMTGH---LLVKSDVYSYGVVLLELLTGRKP 303
V GT Y+APE +M + + D++S GV++ LL G P
Sbjct: 183 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 102/225 (45%), Gaps = 28/225 (12%)
Query: 96 TNNFEPASILGEGGFGRVFKGVLS-DGTAVAIKRLTCGGQQGDKEF-----LVEVEMLSR 149
+++F+ S+LGEG +G V G VAIK++ + DK L E+++L
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI----EPFDKPLFALRTLREIKILKH 65
Query: 150 LHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAA 209
H N++ + R S + +++ LH + D + I
Sbjct: 66 FKHENIITIFNI--QRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI-YQTL 122
Query: 210 RGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAK---------QAPEGRTNYL 260
R + LH + VIHRD K SN+L+ +N KV DFGLA+ P G+ + +
Sbjct: 123 RAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM 179
Query: 261 STRVMGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKPV 304
T + T Y APE +T ++ DV+S G +L EL R+P+
Sbjct: 180 -TEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 24/215 (11%)
Query: 105 LGEGGFGRVFK----GVLSDGT--AVAIKRLTCGGQQGD-KEFLVEVEMLSRL-HHRNLV 156
LG G FG+V + G+ T VA+K L G + + + E+++L + HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 157 KLVGYYSSRDSSQHLLCYELVPNGSLESWLHG------PLGV------NCHLDWETRMKI 204
L+G ++ ++ E G+L ++L P V L E +
Sbjct: 86 NLLGA-CTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 205 ALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRV 264
+ A+G+ +L S+ C IHRD A NILL K+ DFGLA+ +
Sbjct: 145 SFQVAKGMEFLA--SRKC-IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 201
Query: 265 MGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
++APE ++SDV+S+GV+L E+ +
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 101/222 (45%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFLVEVEMLSR-LHHRN 154
+ FE LG G FGRV + G A+K L DK+ +V+++ + L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + YS +D+S + E VP G + S L + + R A
Sbjct: 94 ILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRR---IGRFSEPHARF-YAAQ 149
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N+L++ + +V DFG AK+ +GRT L GT
Sbjct: 150 IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC----GT 201
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+APE ++ D ++ GV++ E+ G P QP
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 96/212 (45%), Gaps = 20/212 (9%)
Query: 98 NFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFL-VEVEMLSRLHHRNL 155
++ ++G G FG V++ L D G VAIK++ DK F E++++ +L H N+
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-----QDKRFKNRELQIMRKLDHCNI 87
Query: 156 VKL-VGYYSS---RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARG 211
V+L +YSS +D L + VP H ++ + R
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRS 146
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHA-KVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
LAY+H + HRD K N+LL+ + K+ DFG AKQ G N + + Y
Sbjct: 147 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYY 200
Query: 271 VAPEYAMTGHLLVKS-DVYSYGVVLLELLTGR 301
APE S DV+S G VL ELL G+
Sbjct: 201 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 127/313 (40%), Gaps = 52/313 (16%)
Query: 97 NNFEPASILGEGGFGRVFKGVL------SDGTAVAIKRLTCGGQQGD-KEFLVEVEMLSR 149
N LGEG FG+V K + T VA+K L + ++ L E +L +
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 150 LHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH-----GP-------LGVNCHLD 197
++H +++KL G S LL E GSL +L GP + LD
Sbjct: 83 VNHPHVIKLYGACSQ--DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLD 140
Query: 198 WETR--------MKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLA 249
+ A ++G+ YL E ++HRD A NIL+ K++DFGL+
Sbjct: 141 HPDERALTMGDLISFAWQISQGMQYLAEMK---LVHRDLAARNILVAEGRKMKISDFGLS 197
Query: 250 KQAPEGRTNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDMSQ 308
+ E + ++ ++A E +SDV+S+GV+L E++T G P
Sbjct: 198 RDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP 257
Query: 309 PSGQENLVTWARPILRDKDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMG 368
P NL+ + R + EE+ + C E ++RP
Sbjct: 258 PERLFNLLKTGHRMERPDNCSEEM-----------------YRLMLQCWKQEPDKRPVFA 300
Query: 369 EVVQSLK--MVQR 379
++ + L+ MV+R
Sbjct: 301 DISKDLEKMMVKR 313
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 101/222 (45%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFLVEVEMLSR-LHHRN 154
+ FE LG G FGRV + G A+K L DK+ +V+++ + L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + YS +D+S + E VP G + S L + + R A
Sbjct: 94 ILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRR---IGRFSEPHARF-YAAQ 149
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N+L++ + +V DFG AK+ +GRT L GT
Sbjct: 150 IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC----GT 201
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+APE ++ D ++ GV++ E+ G P QP
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 101/222 (45%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFLVEVEMLSR-LHHRN 154
+ FE LG G FGRV + G A+K L DK+ +V+++ + L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + YS +D+S + E VP G + S L + + R A
Sbjct: 94 ILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRR---IGRFSEPHARF-YAAQ 149
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N+L++ + +V DFG AK+ +GRT L GT
Sbjct: 150 IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC----GT 201
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+APE ++ D ++ GV++ E+ G P QP
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 93/213 (43%), Gaps = 22/213 (10%)
Query: 105 LGEGGFGRVFK----GVLSDGT--AVAIKRLTCGGQQGD-KEFLVEVEMLSRL-HHRNLV 156
LG G FG+V + G+ T VA+K L G + + + E+++L + HH N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 157 KLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLG----------VNCHLDWETRMKIAL 206
L+G ++ ++ E G+L ++L L E + +
Sbjct: 97 NLLGA-CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSF 155
Query: 207 DAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMG 266
A+G+ +L IHRD A NILL K+ DFGLA+ +
Sbjct: 156 QVAKGMEFLASRKX---IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 267 TFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
++APE ++SDV+S+GV+L E+ +
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 96/212 (45%), Gaps = 20/212 (9%)
Query: 98 NFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFL-VEVEMLSRLHHRNL 155
++ ++G G FG V++ L D G VAIK++ DK F E++++ +L H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-----QDKRFKNRELQIMRKLDHCNI 75
Query: 156 VKL-VGYYSS---RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARG 211
V+L +YSS +D L + VP H ++ + R
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRS 134
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHA-KVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
LAY+H + HRD K N+LL+ + K+ DFG AKQ G N + + Y
Sbjct: 135 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYY 188
Query: 271 VAPEYAMTGHLLVKS-DVYSYGVVLLELLTGR 301
APE S DV+S G VL ELL G+
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 96/212 (45%), Gaps = 20/212 (9%)
Query: 98 NFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFL-VEVEMLSRLHHRNL 155
++ ++G G FG V++ L D G VAIK++ DK F E++++ +L H N+
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-----QDKRFKNRELQIMRKLDHCNI 87
Query: 156 VKL-VGYYSS---RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARG 211
V+L +YSS +D L + VP H ++ + R
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRS 146
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHA-KVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
LAY+H + HRD K N+LL+ + K+ DFG AKQ G N + + Y
Sbjct: 147 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYY 200
Query: 271 VAPEYAMTGHLLVKS-DVYSYGVVLLELLTGR 301
APE S DV+S G VL ELL G+
Sbjct: 201 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 111/239 (46%), Gaps = 28/239 (11%)
Query: 98 NFEPASILGEGGFGRV--FKGVLSDGTAVAIKRL--TCGGQQGDKEFLVEVEMLSRLHHR 153
N+ +G+G F +V + +L+ G VA++ + T ++ EV ++ L+H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 154 NLVKLVGYYSSRDSSQHLLCYELVPNGSLESWL--HGPLGVNCHLDWETRMKIALDAARG 211
N+VKL + + L E G + +L HG + + E R K
Sbjct: 74 NIVKLFEVIETEKTL--YLVMEYASGGEVFDYLVAHGRMK-----EKEARAKFR-QIVSA 125
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYV 271
+ Y H Q ++HRD KA N+LL+ + + K+ADFG + + G N L G+ Y
Sbjct: 126 VQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFG--NKLD-EFCGSPPYA 179
Query: 272 APE-YAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRL 329
APE + + + DV+S GV+L L++G P D GQ NL +LR K R+
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD-----GQ-NLKELRERVLRGKYRI 232
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 108/226 (47%), Gaps = 35/226 (15%)
Query: 98 NFEPASILGEGGFGRVFKGVLSDGT----AVAIKRLTCGGQQGDKEF-------LVEVEM 146
N+EP ILG G V + + T AV I +T GG +E L EV++
Sbjct: 18 NYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 147 LSRLH-HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETR--MK 203
L ++ H N+++L Y + ++ L ++L+ G L +L + ++ + ETR M+
Sbjct: 77 LRKVSGHPNIIQLKDTYET--NTFFFLVFDLMKKGELFDYLTEKVTLS---EKETRKIMR 131
Query: 204 IALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTR 263
L+ L L+ ++HRD K NILL+++ + K+ DFG + Q G
Sbjct: 132 ALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK---LRS 182
Query: 264 VMGTFGYVAPEY---AMTGH---LLVKSDVYSYGVVLLELLTGRKP 303
V GT Y+APE +M + + D++S GV++ LL G P
Sbjct: 183 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSR-LHHRN 154
+ FE LG G FGRV + G A+K L DK+ +V+++ + L+ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 94
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + +S +D+S + E VP G + S L + + R A
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR---IGRFSEPHARF-YAAQ 150
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N+L++ + +V DFG AK+ +GRT L GT
Sbjct: 151 IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC----GT 202
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+APE ++ D ++ GV++ E+ G P QP
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 19/213 (8%)
Query: 99 FEPASILGEGGFGRVFKGVLSDGT--------AVAIKRLTCGGQQGDKEFLVEVEMLSRL 150
FE +LG+GG+G+VF+ G V K + + E +L +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
H +V L+ Y+ + + L E + G L L G+ +T + +
Sbjct: 79 KHPFIVDLI--YAFQTGGKLYLILEYLSGGELFMQLERE-GIFME---DTACFYLAEISM 132
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
L +LH Q +I+RD K NI+L + H K+ DFGL K++ T ++ GT Y
Sbjct: 133 ALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT--VTHXFCGTIEY 187
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
+APE M D +S G ++ ++LTG P
Sbjct: 188 MAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 99/218 (45%), Gaps = 32/218 (14%)
Query: 98 NFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFL-VEVEMLSRLHHRNL 155
++ ++G G FG V++ L D G VAIK++ DK F E++++ +L H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-----QDKRFKNRELQIMRKLDHCNI 75
Query: 156 VKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAA------ 209
V+L ++ S + ++ LV + E+ V H +R K L
Sbjct: 76 VRLRYFFYSSGEKKDVVYLNLVLDYVPETVYR----VARHY---SRAKQTLPVIYVKLYM 128
Query: 210 ----RGLAYLHEDSQPCVIHRDFKASNILLENNFHA-KVADFGLAKQAPEGRTNYLSTRV 264
R LAY+H + HRD K N+LL+ + K+ DFG AKQ G N
Sbjct: 129 YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSX 182
Query: 265 MGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGR 301
+ + Y APE S DV+S G VL ELL G+
Sbjct: 183 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 96/212 (45%), Gaps = 20/212 (9%)
Query: 98 NFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFL-VEVEMLSRLHHRNL 155
++ ++G G FG V++ L D G VAIK++ DK F E++++ +L H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-----QDKRFKNRELQIMRKLDHCNI 75
Query: 156 VKL-VGYYSS---RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARG 211
V+L +YSS +D L + VP H ++ + R
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRS 134
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHA-KVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
LAY+H + HRD K N+LL+ + K+ DFG AKQ G N + + Y
Sbjct: 135 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYY 188
Query: 271 VAPEYAMTGHLLVKS-DVYSYGVVLLELLTGR 301
APE S DV+S G VL ELL G+
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 96/212 (45%), Gaps = 20/212 (9%)
Query: 98 NFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFL-VEVEMLSRLHHRNL 155
++ ++G G FG V++ L D G VAIK++ DK F E++++ +L H N+
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-----QDKRFKNRELQIMRKLDHCNI 79
Query: 156 VKL-VGYYSS---RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARG 211
V+L +YSS +D L + VP H ++ + R
Sbjct: 80 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRS 138
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHA-KVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
LAY+H + HRD K N+LL+ + K+ DFG AKQ G N + + Y
Sbjct: 139 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYY 192
Query: 271 VAPEYAMTGHLLVKS-DVYSYGVVLLELLTGR 301
APE S DV+S G VL ELL G+
Sbjct: 193 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSR-LHHRN 154
+ FE LG G FGRV + G A+K L DK+ +V+++ + L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + +S +D+S + E VP G + S L + + R A
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR---IGRFSEPHARF-YAAQ 149
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N+L++ + +V DFG AK+ +GRT L GT
Sbjct: 150 IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC----GT 201
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+APE ++ D ++ GV++ E+ G P QP
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 127/313 (40%), Gaps = 52/313 (16%)
Query: 97 NNFEPASILGEGGFGRVFKGVL------SDGTAVAIKRLTCGGQQGD-KEFLVEVEMLSR 149
N LGEG FG+V K + T VA+K L + ++ L E +L +
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 150 LHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLH-----GP-------LGVNCHLD 197
++H +++KL G S LL E GSL +L GP + LD
Sbjct: 83 VNHPHVIKLYGACSQ--DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLD 140
Query: 198 WETR--------MKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLA 249
+ A ++G+ YL E ++HRD A NIL+ K++DFGL+
Sbjct: 141 HPDERALTMGDLISFAWQISQGMQYLAEMK---LVHRDLAARNILVAEGRKMKISDFGLS 197
Query: 250 KQAPEGRTNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDMSQ 308
+ E + ++ ++A E +SDV+S+GV+L E++T G P
Sbjct: 198 RDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP 257
Query: 309 PSGQENLVTWARPILRDKDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMG 368
P NL+ + R + EE+ + C E ++RP
Sbjct: 258 PERLFNLLKTGHRMERPDNCSEEM-----------------YRLMLQCWKQEPDKRPVFA 300
Query: 369 EVVQSLK--MVQR 379
++ + L+ MV+R
Sbjct: 301 DISKDLEKMMVKR 313
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSR-LHHRN 154
+ FE LG G FGRV + G A+K L DK+ +V+++ + L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + +S +D+S + E VP G + S L + + R A
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR---IGRFSEPHARF-YAAQ 149
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N+L++ + +V DFG AK+ +GRT L GT
Sbjct: 150 IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC----GT 201
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+APE ++ D ++ GV++ E+ G P QP
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 96/212 (45%), Gaps = 20/212 (9%)
Query: 98 NFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFL-VEVEMLSRLHHRNL 155
++ ++G G FG V++ L D G VAIK++ DK F E++++ +L H N+
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-----QDKRFKNRELQIMRKLDHCNI 76
Query: 156 VKL-VGYYSS---RDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARG 211
V+L +YSS +D L + VP H ++ + R
Sbjct: 77 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRS 135
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHA-KVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
LAY+H + HRD K N+LL+ + K+ DFG AKQ G N + + Y
Sbjct: 136 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYY 189
Query: 271 VAPEYAMTGHLLVKS-DVYSYGVVLLELLTGR 301
APE S DV+S G VL ELL G+
Sbjct: 190 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSR-LHHRN 154
+ FE LG G FGRV + G A+K L DK+ +V+++ + L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + +S +D+S + E VP G + S L + + R A
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR---IGRFSEPHARF-YAAQ 149
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N+L++ + +V DFG AK+ +GRT L GT
Sbjct: 150 IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC----GT 201
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+APE ++ D ++ GV++ E+ G P QP
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 101/222 (45%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLVEV-EMLSRLHHRN 154
+ FE LG G FGRV + G A+K L DK+ +V++ E+ L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKEIEHTLNEKR 93
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + +S +D+S + E P G + S L + + R A
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR---IGRFSEPHARF-YAAQ 149
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N++++ + KV DFGLAK+ +GRT L GT
Sbjct: 150 IVLTFEYLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGLAKRV-KGRTWXLC----GT 201
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+APE ++ D ++ GV++ E+ G P QP
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 19/213 (8%)
Query: 99 FEPASILGEGGFGRVFKGVLSDGT--------AVAIKRLTCGGQQGDKEFLVEVEMLSRL 150
FE +LG+GG+G+VF+ G V K + + E +L +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
H +V L+ Y+ + + L E + G L L G+ +T + +
Sbjct: 79 KHPFIVDLI--YAFQTGGKLYLILEYLSGGELFMQLERE-GIFME---DTACFYLAEISM 132
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
L +LH Q +I+RD K NI+L + H K+ DFGL K++ T ++ GT Y
Sbjct: 133 ALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT--VTHTFCGTIEY 187
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
+APE M D +S G ++ ++LTG P
Sbjct: 188 MAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 111/239 (46%), Gaps = 44/239 (18%)
Query: 90 EELKEATNN--------FEPASILGEGGFGRVFKGVLSD--GT----AVAIKRLTCGGQQ 135
E+ K+ +NN F +LG+G FG+V +L+D GT A+ I + Q
Sbjct: 4 EDRKQPSNNLDRVKLTDFNFLMVLGKGSFGKV---MLADRKGTEELYAIKILKKDVVIQD 60
Query: 136 GDKE-FLVEVEMLSRLHHRN-LVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVN 193
D E +VE +L+ L L +L + + D ++ E V G L
Sbjct: 61 DDVECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVM--EYVNGGDLMY--------- 109
Query: 194 CHLDWETRMK------IALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFG 247
H+ + K A + + GL +LH+ +I+RD K N++L++ H K+ADFG
Sbjct: 110 -HIQQVGKFKEPQAVFYAAEISIGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFG 165
Query: 248 LAKQAPEGRTNYLSTR-VMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 305
+ K E + ++TR GT Y+APE D ++YGV+L E+L G+ P D
Sbjct: 166 MCK---EHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 111/239 (46%), Gaps = 28/239 (11%)
Query: 98 NFEPASILGEGGFGRV--FKGVLSDGTAVAIKRL--TCGGQQGDKEFLVEVEMLSRLHHR 153
N+ +G+G F +V + +L+ G VAIK + T ++ EV ++ L+H
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILT-GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHP 71
Query: 154 NLVKLVGYYSSRDSSQHLLCYELVPNGSLESWL--HGPLGVNCHLDWETRMKIALDAARG 211
N+VKL + + L E G + +L HG + + E R K
Sbjct: 72 NIVKLFEVIETEKTL--YLIMEYASGGEVFDYLVAHGRMK-----EKEARSKFR-QIVSA 123
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYV 271
+ Y H Q ++HRD KA N+LL+ + + K+ADFG + + G L T G+ Y
Sbjct: 124 VQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG--GKLDT-FCGSPPYA 177
Query: 272 APE-YAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRL 329
APE + + + DV+S GV+L L++G P D GQ NL +LR K R+
Sbjct: 178 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD-----GQ-NLKELRERVLRGKYRI 230
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 52/85 (61%), Gaps = 6/85 (7%)
Query: 223 VIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGHLL 282
++HRD K N+LL++N + K+ADFGL+ +G N+L T G+ Y APE + G L
Sbjct: 129 IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG--NFLKTSC-GSPNYAAPE-VINGKLY 184
Query: 283 V--KSDVYSYGVVLLELLTGRKPVD 305
+ DV+S G+VL +L GR P D
Sbjct: 185 AGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSR-LHHRN 154
+ FE LG G FGRV + G A+K L DK+ +V+++ + L+ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 94
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + +S +D+S + E VP G + S L + + R A
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR---IGRFSEPHARF-YAAQ 150
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N+L++ + +V DFG AK+ +GRT L GT
Sbjct: 151 IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWTLC----GT 202
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+APE ++ D ++ GV++ E+ G P QP
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 100/222 (45%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSR-LHHRN 154
+ FE LG G FGRV + G A+K L DK+ +V+++ + L+ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 94
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + +S +D+S + E P G + S L + + R A
Sbjct: 95 ILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR---IGRFXEPHARF-YAAQ 150
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N++++ + KV DFG AK+ +GRT L GT
Sbjct: 151 IVLTFEYLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRV-KGRTWXLC----GT 202
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+APE ++ D ++ GV++ E+ G P QP
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 96/215 (44%), Gaps = 24/215 (11%)
Query: 105 LGEGGFGRVFK----GVLSDGT--AVAIKRLTCGGQQGD-KEFLVEVEMLSRL-HHRNLV 156
LG G FG+V + G+ T VA+K L G + + + E+++L + HH N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 157 KLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLG------------VNCHLDWETRMKI 204
L+G ++ ++ E G+L ++L L E +
Sbjct: 97 NLLGA-CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICY 155
Query: 205 ALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRV 264
+ A+G+ +L S+ C IHRD A NILL K+ DFGLA+ +
Sbjct: 156 SFQVAKGMEFLA--SRKC-IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 212
Query: 265 MGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
++APE ++SDV+S+GV+L E+ +
Sbjct: 213 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 100/222 (45%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSR-LHHRN 154
+ FE LG G FGRV + G A+K L DK+ +V+++ + L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + +S +D+S + E P G + S L + + R A
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR---IGRFXEPHARF-YAAQ 149
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N++++ + KV DFG AK+ +GRT L GT
Sbjct: 150 IVLTFEYLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRV-KGRTWXLC----GT 201
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+APE ++ D ++ GV++ E+ G P QP
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 94/211 (44%), Gaps = 20/211 (9%)
Query: 105 LGEGGFGRVFK----GVLSDGT--AVAIKRLTCGGQQGD-KEFLVEVEMLSRL-HHRNLV 156
LG G FG+V + G+ T VA+K L G + + + E+++L + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 157 KLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLG--------VNCHLDWETRMKIALDA 208
L+G ++ ++ E G+L ++L L E + +
Sbjct: 95 NLLGA-CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQV 153
Query: 209 ARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF 268
A+G+ +L + IHRD A NILL K+ DFGLA+ +
Sbjct: 154 AKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPL 210
Query: 269 GYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
++APE ++SDV+S+GV+L E+ +
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSR-LHHRN 154
+ FE LG G FGRV + G A+K L DK+ +V+++ + L+ +
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 79
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + +S +D+S + E VP G + S L + + R A
Sbjct: 80 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR---IGRFSEPHARF-YAAQ 135
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N+L++ + +V DFG AK+ +GRT L GT
Sbjct: 136 IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWTLC----GT 187
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+APE ++ D ++ GV++ E+ G P QP
Sbjct: 188 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 229
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 108/217 (49%), Gaps = 23/217 (10%)
Query: 97 NNFEPASILGEGGFGRVFKGVL-SDGTAVAIKRLT-CGGQQGDKEFLVEVEMLSRLHH-R 153
N+ E +G G G+V+K G +A+K++ G ++ +K L++++++ + H
Sbjct: 25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCP 84
Query: 154 NLVKLVGYYSSRDSSQHLLCYELVPNGS--LESWLHGPLGVNCHLDWETRMKIALDAARG 211
+V+ G + + ++ + EL+ + L+ + GP+ +M +A+ +
Sbjct: 85 YIVQCFGTFIT--NTDVFIAMELMGTCAEKLKKRMQGPIPERIL----GKMTVAI--VKA 136
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYV 271
L YL E + VIHRD K SNILL+ K+ DFG++ + + + R G Y+
Sbjct: 137 LYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAK---DRSAGCAAYM 191
Query: 272 APEY-----AMTGHLLVKSDVYSYGVVLLELLTGRKP 303
APE +++DV+S G+ L+EL TG+ P
Sbjct: 192 APERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 106/237 (44%), Gaps = 35/237 (14%)
Query: 84 TRFLAYEELKE----ATNNFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLT---CGGQQ 135
TRF ++ ++ N+F I+G GGFG V+ +D G A+K L +Q
Sbjct: 172 TRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQ 231
Query: 136 GDKEFLVEVEMLSRLHHRNLVKLVGY-YSSRDSSQHLLCYELVPNGSLESWL--HGPLGV 192
G+ L E MLS + + +V Y+ + +L+ G L L HG
Sbjct: 232 GETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFS- 290
Query: 193 NCHLDWETRMKI-ALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLA-- 249
E M+ A + GL ++H V++RD K +NILL+ + H +++D GLA
Sbjct: 291 ------EADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACD 341
Query: 250 --KQAPEGRTNYLSTRVMGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKP 303
K+ P +GT GY+APE G S D +S G +L +LL G P
Sbjct: 342 FSKKKPHAS--------VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 106/237 (44%), Gaps = 35/237 (14%)
Query: 84 TRFLAYEELKE----ATNNFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLT---CGGQQ 135
TRF ++ ++ N+F I+G GGFG V+ +D G A+K L +Q
Sbjct: 172 TRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQ 231
Query: 136 GDKEFLVEVEMLSRLHHRNLVKLVGY-YSSRDSSQHLLCYELVPNGSLESWL--HGPLGV 192
G+ L E MLS + + +V Y+ + +L+ G L L HG
Sbjct: 232 GETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFS- 290
Query: 193 NCHLDWETRMKI-ALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLA-- 249
E M+ A + GL ++H V++RD K +NILL+ + H +++D GLA
Sbjct: 291 ------EADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACD 341
Query: 250 --KQAPEGRTNYLSTRVMGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKP 303
K+ P +GT GY+APE G S D +S G +L +LL G P
Sbjct: 342 FSKKKPHAS--------VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 106/237 (44%), Gaps = 35/237 (14%)
Query: 84 TRFLAYEELKE----ATNNFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLT---CGGQQ 135
TRF ++ ++ N+F I+G GGFG V+ +D G A+K L +Q
Sbjct: 172 TRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQ 231
Query: 136 GDKEFLVEVEMLSRLHHRNLVKLVGY-YSSRDSSQHLLCYELVPNGSLESWL--HGPLGV 192
G+ L E MLS + + +V Y+ + +L+ G L L HG
Sbjct: 232 GETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFS- 290
Query: 193 NCHLDWETRMKI-ALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLA-- 249
E M+ A + GL ++H V++RD K +NILL+ + H +++D GLA
Sbjct: 291 ------EADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACD 341
Query: 250 --KQAPEGRTNYLSTRVMGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKP 303
K+ P +GT GY+APE G S D +S G +L +LL G P
Sbjct: 342 FSKKKPHAS--------VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 96/217 (44%), Gaps = 24/217 (11%)
Query: 96 TNNFEPASILGEGGFGRVF----KGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLH 151
++ ++ LG G +G V K ++ IK+ + L EV +L +L
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 152 HRNLVKLVGYYSSRDSSQHLLCYELVPNGSL--ESWLHGPLGVNCHLDWETRMKIALDAA 209
H N++KL ++ D + L E+ G L E L +D MK L
Sbjct: 80 HPNIMKLYEFFE--DKRNYYLVMEVYRGGELFDEIILRQKFS---EVDAAVIMKQVLS-- 132
Query: 210 RGLAYLHEDSQPCVIHRDFKASNILLENNFH---AKVADFGLAKQAPEGRTNYLSTRVMG 266
G YLH+ + ++HRD K N+LLE+ K+ DFGL+ G + R +G
Sbjct: 133 -GTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG--GKMKER-LG 185
Query: 267 TFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
T Y+APE + K DV+S GV+L LL G P
Sbjct: 186 TAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCGYPP 221
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 28/211 (13%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSR--LHHRNLVKLVGYY 162
+G+G FG V++G G VA+K + + ++ + E E+ L H N++ +
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAA- 104
Query: 163 SSRDS---SQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHED- 218
++D+ +Q L + +GSL +L+ + E +K+AL A GLA+LH +
Sbjct: 105 DNKDNGTWTQLWLVSDYHEHGSLFDYLN-----RYTVTVEGMIKLALSTASGLAHLHMEI 159
Query: 219 ----SQPCVIHRDFKASNILLENNFHAKVADFGLA--KQAPEGRTNYLSTRVMGTFGYVA 272
+P + HRD K+ NIL++ N +AD GLA + + +GT Y+A
Sbjct: 160 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 219
Query: 273 PEY----AMTGHL--LVKSDVYSYGVVLLEL 297
PE H ++D+Y+ G+V E+
Sbjct: 220 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 98/221 (44%), Gaps = 30/221 (13%)
Query: 105 LGEGGFGRVFKGVLSDGTA------VAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKL 158
+G G F V+KG+ ++ T + ++LT +Q KE E E L L H N+V+
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKE---EAEXLKGLQHPNIVRF 90
Query: 159 VGYYSSRDSSQH--LLCYELVPNGSLESWLH--GPLGVNCHLDWETRMKIALDAARGLAY 214
+ S + +L EL +G+L+++L + W ++ +GL +
Sbjct: 91 YDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI------LKGLQF 144
Query: 215 LHEDSQPCVIHRDFKASNILLEN-NFHAKVADFGLA--KQAPEGRTNYLSTRVMGTFGYV 271
LH + P +IHRD K NI + K+ D GLA K+A + V+GT +
Sbjct: 145 LHTRTPP-IIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS------FAKAVIGTPEFX 197
Query: 272 APEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQ 312
APE + DVY++G LE T P Q + Q
Sbjct: 198 APEXYEEKY-DESVDVYAFGXCXLEXATSEYPYSECQNAAQ 237
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFLVEVEMLSR-LHHRN 154
+ FE LG G FGRV + G A+K L DK+ +V+++ + L+ +
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 86
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + +S +D+S + E VP G + S L + + R A
Sbjct: 87 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR---IGRFXEPHARF-YAAQ 142
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N+L++ + +V DFG AK+ +GRT L GT
Sbjct: 143 IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC----GT 194
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+APE ++ D ++ GV++ E+ G P QP
Sbjct: 195 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 236
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 106/237 (44%), Gaps = 35/237 (14%)
Query: 84 TRFLAYEELKE----ATNNFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLT---CGGQQ 135
TRF ++ ++ N+F I+G GGFG V+ +D G A+K L +Q
Sbjct: 171 TRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQ 230
Query: 136 GDKEFLVEVEMLSRLHHRNLVKLVGY-YSSRDSSQHLLCYELVPNGSLESWL--HGPLGV 192
G+ L E MLS + + +V Y+ + +L+ G L L HG
Sbjct: 231 GETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFS- 289
Query: 193 NCHLDWETRMKI-ALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLA-- 249
E M+ A + GL ++H V++RD K +NILL+ + H +++D GLA
Sbjct: 290 ------EADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACD 340
Query: 250 --KQAPEGRTNYLSTRVMGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKP 303
K+ P +GT GY+APE G S D +S G +L +LL G P
Sbjct: 341 FSKKKPHAS--------VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 100/222 (45%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSR-LHHRN 154
+ FE LG G FGRV + G A+K L DK+ +V+++ + L+ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 94
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + +S +D+S + E P G + S L + + R A
Sbjct: 95 ILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR---IGRFSEPHARF-YAAQ 150
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N++++ + KV DFG AK+ +GRT L GT
Sbjct: 151 IVLTFEYLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRV-KGRTWXLC----GT 202
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+APE ++ D ++ GV++ E+ G P QP
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 105 LGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYS 163
+GEG G V G VA+K + QQ + EV ++ H N+V++ Y S
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEM--YKS 110
Query: 164 SRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCV 223
+ + E + G+L + L+ E + + LAYLH V
Sbjct: 111 YLVGEELWVLMEFLQGGALTDIVS-----QVRLNEEQIATVCEAVLQALAYLHAQG---V 162
Query: 224 IHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGHLLV 283
IHRD K+ +ILL + K++DFG Q + ++GT ++APE
Sbjct: 163 IHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK--RKXLVGTPYWMAPEVISRSLYAT 220
Query: 284 KSDVYSYGVVLLELLTGRKP 303
+ D++S G++++E++ G P
Sbjct: 221 EVDIWSLGIMVIEMVDGEPP 240
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 100/222 (45%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSR-LHHRN 154
+ FE LG G FGRV + G A+K L DK+ +V+++ + L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + +S +D+S + E P G + S L + + R A
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR---IGRFSEPHARF-YAAQ 149
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N++++ + KV DFG AK+ +GRT L GT
Sbjct: 150 IVLTFEYLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRV-KGRTWXLC----GT 201
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+APE ++ D ++ GV++ E+ G P QP
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 105/242 (43%), Gaps = 37/242 (15%)
Query: 77 SLPHPTSTRFLAYE------ELKEATNNFEPASILGEGGFGRVFKGVLS-DGTAVAIKRL 129
S P P + F E E++ + +P +G G +G V V G VAIK+L
Sbjct: 2 SSPPPARSGFYRQEVTKTAWEVRAVYRDLQP---VGSGAYGAVCSAVDGRTGAKVAIKKL 58
Query: 130 TCGGQQG--DKEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPN------GS 181
Q K E+ +L + H N++ L+ ++ ++ + LV G
Sbjct: 59 YRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGK 118
Query: 182 LESWLHGPLGVNCHLDWETRMK-IALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFH 240
L H LG E R++ + +GL Y+H +IHRD K N+ + +
Sbjct: 119 LMK--HEKLG-------EDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCE 166
Query: 241 AKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLT 299
K+ DFGLA+QA + TR Y APE + ++ D++S G ++ E++T
Sbjct: 167 LKILDFGLARQADSEMXGXVVTR-----WYRAPEVILNWMRYTQTVDIWSVGCIMAEMIT 221
Query: 300 GR 301
G+
Sbjct: 222 GK 223
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 20/211 (9%)
Query: 105 LGEGGFGRVFK----GVLSDGT--AVAIKRLTCGGQQGD-KEFLVEVEMLSRL-HHRNLV 156
LG G FG+V + G+ T VA+K L G + + + E+++L + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 157 KLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLG--------VNCHLDWETRMKIALDA 208
L+G ++ ++ E G+L ++L L E + +
Sbjct: 95 NLLGA-CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQV 153
Query: 209 ARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF 268
A+G+ +L IHRD A NILL K+ DFGLA+ +
Sbjct: 154 AKGMEFLASRKX---IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 210
Query: 269 GYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
++APE ++SDV+S+GV+L E+ +
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 28/211 (13%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSR--LHHRNLVKLVGYY 162
+G+G FG V++G G VA+K + + ++ + E E+ L H N++ +
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAA- 71
Query: 163 SSRDS---SQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHED- 218
++D+ +Q L + +GSL +L+ + E +K+AL A GLA+LH +
Sbjct: 72 DNKDNGTWTQLWLVSDYHEHGSLFDYLN-----RYTVTVEGMIKLALSTASGLAHLHMEI 126
Query: 219 ----SQPCVIHRDFKASNILLENNFHAKVADFGLA--KQAPEGRTNYLSTRVMGTFGYVA 272
+P + HRD K+ NIL++ N +AD GLA + + +GT Y+A
Sbjct: 127 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 186
Query: 273 PEY----AMTGHL--LVKSDVYSYGVVLLEL 297
PE H ++D+Y+ G+V E+
Sbjct: 187 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 100/222 (45%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSR-LHHRN 154
+ FE LG G FGRV + G A+K L DK+ +V+++ + L+ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 94
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + +S +D+S + E P G + S L + + R A
Sbjct: 95 ILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR---IGRFSEPHARF-YAAQ 150
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N++++ + KV DFG AK+ +GRT L GT
Sbjct: 151 IVLTFEYLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRV-KGRTWXLC----GT 202
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+APE ++ D ++ GV++ E+ G P QP
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 28/211 (13%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSR--LHHRNLVKLVGYY 162
+G+G FG V++G G VA+K + + ++ + E E+ L H N++ +
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAA- 66
Query: 163 SSRDS---SQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHED- 218
++D+ +Q L + +GSL +L+ + E +K+AL A GLA+LH +
Sbjct: 67 DNKDNGTWTQLWLVSDYHEHGSLFDYLN-----RYTVTVEGMIKLALSTASGLAHLHMEI 121
Query: 219 ----SQPCVIHRDFKASNILLENNFHAKVADFGLA--KQAPEGRTNYLSTRVMGTFGYVA 272
+P + HRD K+ NIL++ N +AD GLA + + +GT Y+A
Sbjct: 122 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 181
Query: 273 PEY----AMTGHL--LVKSDVYSYGVVLLEL 297
PE H ++D+Y+ G+V E+
Sbjct: 182 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 93/213 (43%), Gaps = 25/213 (11%)
Query: 104 ILGEGGFGRVFKGVLSDGTAV-----AIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKL 158
LG+GGF + F+ +D V K L Q +K +E+ + L H+++V
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGF 86
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHED 218
G++ D + EL SL LH + E R + G YLH +
Sbjct: 87 HGFFEDNDFV--FVVLELCRRRSLLE-LHK--RRKALTEPEARYYLR-QIVLGCQYLHRN 140
Query: 219 SQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTR---VMGTFGYVAPE- 274
VIHRD K N+ L + K+ DFGLA + Y R + GT Y+APE
Sbjct: 141 R---VIHRDLKLGNLFLNEDLEVKIGDFGLAT-----KVEYDGERKKTLCGTPNYIAPEV 192
Query: 275 YAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMS 307
+ GH + DV+S G ++ LL G+ P + S
Sbjct: 193 LSKKGHSF-EVDVWSIGCIMYTLLVGKPPFETS 224
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 28/211 (13%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSR--LHHRNLVKLVGYY 162
+G+G FG V++G G VA+K + + ++ + E E+ L H N++ +
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAA- 65
Query: 163 SSRDS---SQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHED- 218
++D+ +Q L + +GSL +L+ + E +K+AL A GLA+LH +
Sbjct: 66 DNKDNGTWTQLWLVSDYHEHGSLFDYLN-----RYTVTVEGMIKLALSTASGLAHLHMEI 120
Query: 219 ----SQPCVIHRDFKASNILLENNFHAKVADFGLA--KQAPEGRTNYLSTRVMGTFGYVA 272
+P + HRD K+ NIL++ N +AD GLA + + +GT Y+A
Sbjct: 121 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 180
Query: 273 PEY----AMTGHL--LVKSDVYSYGVVLLEL 297
PE H ++D+Y+ G+V E+
Sbjct: 181 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 93/213 (43%), Gaps = 25/213 (11%)
Query: 104 ILGEGGFGRVFKGVLSDGTAV-----AIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKL 158
LG+GGF + F+ +D V K L Q +K +E+ + L H+++V
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGF 104
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHED 218
G++ D + EL SL LH + E R + G YLH +
Sbjct: 105 HGFFEDNDFV--FVVLELCRRRSLLE-LHK--RRKALTEPEARYYLR-QIVLGCQYLHRN 158
Query: 219 SQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTR---VMGTFGYVAPE- 274
VIHRD K N+ L + K+ DFGLA + Y R + GT Y+APE
Sbjct: 159 R---VIHRDLKLGNLFLNEDLEVKIGDFGLAT-----KVEYDGERKKVLCGTPNYIAPEV 210
Query: 275 YAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMS 307
+ GH + DV+S G ++ LL G+ P + S
Sbjct: 211 LSKKGHSF-EVDVWSIGCIMYTLLVGKPPFETS 242
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 101/212 (47%), Gaps = 29/212 (13%)
Query: 105 LGEGGFGRVFKGVLS-DGTAVAIKRLTCGGQQGDKEFLV------EVEMLSRLHHRNLVK 157
LG G FG+V G G VA+K L +Q + V E++ L H +++K
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILN---RQKIRSLDVVGKIKREIQNLKLFRHPHIIK 75
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWL--HGPLGVNCHLDWETRMKIALDAARGLAYL 215
L S+ + + E V G L ++ HG + + E R ++ + Y
Sbjct: 76 LYQVIST--PTDFFMVMEYVSGGELFDYICKHGRVE-----EMEAR-RLFQQILSAVDYC 127
Query: 216 HEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEY 275
H + V+HRD K N+LL+ + +AK+ADFGL+ +G +L T G+ Y APE
Sbjct: 128 H---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG--EFLRTSC-GSPNYAAPE- 180
Query: 276 AMTGHLLV--KSDVYSYGVVLLELLTGRKPVD 305
++G L + D++S GV+L LL G P D
Sbjct: 181 VISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 101/225 (44%), Gaps = 28/225 (12%)
Query: 96 TNNFEPASILGEGGFGRVFKGVLS-DGTAVAIKRLTCGGQQGDKEF-----LVEVEMLSR 149
+++F+ S+LGEG +G V G VAIK++ + DK L E+++L
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI----EPFDKPLFALRTLREIKILKH 65
Query: 150 LHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAA 209
H N++ + R S + +++ LH + D + I
Sbjct: 66 FKHENIITIFNI--QRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI-YQTL 122
Query: 210 RGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAK---------QAPEGRTNYL 260
R + LH + VIHRD K SN+L+ +N KV DFGLA+ P G+ + +
Sbjct: 123 RAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM 179
Query: 261 STRVMGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKPV 304
+ T Y APE +T ++ DV+S G +L EL R+P+
Sbjct: 180 -VEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 93/213 (43%), Gaps = 25/213 (11%)
Query: 104 ILGEGGFGRVFKGVLSDGTAV-----AIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKL 158
LG+GGF + F+ +D V K L Q +K +E+ + L H+++V
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGF 106
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHED 218
G++ D + EL SL LH + E R + G YLH +
Sbjct: 107 HGFFEDNDFV--FVVLELCRRRSLLE-LHK--RRKALTEPEARYYLR-QIVLGCQYLHRN 160
Query: 219 SQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTR---VMGTFGYVAPE- 274
VIHRD K N+ L + K+ DFGLA + Y R + GT Y+APE
Sbjct: 161 R---VIHRDLKLGNLFLNEDLEVKIGDFGLAT-----KVEYDGERKKVLCGTPNYIAPEV 212
Query: 275 YAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMS 307
+ GH + DV+S G ++ LL G+ P + S
Sbjct: 213 LSKKGHSF-EVDVWSIGCIMYTLLVGKPPFETS 244
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 28/211 (13%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSR--LHHRNLVKLVGYY 162
+G+G FG V++G G VA+K + + ++ + E E+ L H N++ +
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAA- 91
Query: 163 SSRDS---SQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHED- 218
++D+ +Q L + +GSL +L+ + E +K+AL A GLA+LH +
Sbjct: 92 DNKDNGTWTQLWLVSDYHEHGSLFDYLN-----RYTVTVEGMIKLALSTASGLAHLHMEI 146
Query: 219 ----SQPCVIHRDFKASNILLENNFHAKVADFGLA--KQAPEGRTNYLSTRVMGTFGYVA 272
+P + HRD K+ NIL++ N +AD GLA + + +GT Y+A
Sbjct: 147 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 206
Query: 273 PEY----AMTGHL--LVKSDVYSYGVVLLEL 297
PE H ++D+Y+ G+V E+
Sbjct: 207 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 93/213 (43%), Gaps = 25/213 (11%)
Query: 104 ILGEGGFGRVFKGVLSDGTAV-----AIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKL 158
LG+GGF + F+ +D V K L Q +K +E+ + L H+++V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGF 82
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHED 218
G++ D + EL SL LH + E R + G YLH +
Sbjct: 83 HGFFEDNDFV--FVVLELCRRRSLLE-LHK--RRKALTEPEARYYLR-QIVLGCQYLHRN 136
Query: 219 SQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTR---VMGTFGYVAPE- 274
VIHRD K N+ L + K+ DFGLA + Y R + GT Y+APE
Sbjct: 137 R---VIHRDLKLGNLFLNEDLEVKIGDFGLAT-----KVEYDGERKKTLCGTPNYIAPEV 188
Query: 275 YAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMS 307
+ GH + DV+S G ++ LL G+ P + S
Sbjct: 189 LSKKGHSF-EVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLVEV-EMLSRLHHRN 154
+ FE LG G FGRV + G A+K L DK+ +V++ E+ L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKEIEHTLNEKR 93
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + +S +D+S + E P G + S L + + R A
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR---IGRFSEPHARF-YAAQ 149
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N++++ + +V DFGLAK+ +GRT L GT
Sbjct: 150 IVLTFEYLHSLD---LIYRDLKPENLMIDQQGYIQVTDFGLAKRV-KGRTWXLC----GT 201
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+APE ++ D ++ GV++ E+ G P QP
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 93/213 (43%), Gaps = 25/213 (11%)
Query: 104 ILGEGGFGRVFKGVLSDGTAV-----AIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKL 158
LG+GGF + F+ +D V K L Q +K +E+ + L H+++V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGF 82
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHED 218
G++ D + EL SL LH + E R + G YLH +
Sbjct: 83 HGFFEDNDFV--FVVLELCRRRSLLE-LHK--RRKALTEPEARYYLR-QIVLGCQYLHRN 136
Query: 219 SQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTR---VMGTFGYVAPE- 274
VIHRD K N+ L + K+ DFGLA + Y R + GT Y+APE
Sbjct: 137 R---VIHRDLKLGNLFLNEDLEVKIGDFGLAT-----KVEYDGERKKTLCGTPNYIAPEV 188
Query: 275 YAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMS 307
+ GH + DV+S G ++ LL G+ P + S
Sbjct: 189 LSKKGHSF-EVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 77/170 (45%), Gaps = 18/170 (10%)
Query: 138 KEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCH-L 196
+E E+ +L L H N++KL + D L E G L + +N H
Sbjct: 91 EEIYNEISLLKSLDHPNIIKLFDVFE--DKKYFYLVTEFYEGGELFEQI-----INRHKF 143
Query: 197 DWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENN---FHAKVADFGLAKQAP 253
D I G+ YLH+ + ++HRD K NILLEN + K+ DFGL+
Sbjct: 144 DECDAANIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFS 200
Query: 254 EGRTNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
+ +Y +GT Y+APE + K DV+S GV++ LL G P
Sbjct: 201 K---DYKLRDRLGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCGYPP 246
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 28/211 (13%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSR--LHHRNLVKLVGYY 162
+G+G FG V++G G VA+K + + ++ + E E+ L H N++ +
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAA- 68
Query: 163 SSRDS---SQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHED- 218
++D+ +Q L + +GSL +L+ + E +K+AL A GLA+LH +
Sbjct: 69 DNKDNGTWTQLWLVSDYHEHGSLFDYLN-----RYTVTVEGMIKLALSTASGLAHLHMEI 123
Query: 219 ----SQPCVIHRDFKASNILLENNFHAKVADFGLA--KQAPEGRTNYLSTRVMGTFGYVA 272
+P + HRD K+ NIL++ N +AD GLA + + +GT Y+A
Sbjct: 124 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 183
Query: 273 PEY----AMTGHL--LVKSDVYSYGVVLLEL 297
PE H ++D+Y+ G+V E+
Sbjct: 184 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFLVEVEMLSR-LHHRN 154
+ FE LG G FGRV + G A+K L DK+ +V+++ + L+ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 94
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + +S +D+S + E VP G + S L + + R A
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR---IGRFSEPHARF-YAAQ 150
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N+L++ + +V DFG AK+ +GRT L GT
Sbjct: 151 IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC----GT 202
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+APE ++ D ++ GV++ E+ G P QP
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFLVEVEMLSR-LHHRN 154
+ FE LG G FGRV + G A+K L DK+ +V+++ + L+ +
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 114
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + +S +D+S + E VP G + S L + + R A
Sbjct: 115 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR---IGRFSEPHARF-YAAQ 170
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N+L++ + +V DFG AK+ +GRT L GT
Sbjct: 171 IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC----GT 222
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+APE ++ D ++ GV++ E+ G P QP
Sbjct: 223 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFLVEVEMLSR-LHHRN 154
+ FE LG G FGRV + G A+K L DK+ +V+++ + L+ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 94
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + +S +D+S + E VP G + S L + + R A
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR---IGRFSEPHARF-YAAQ 150
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N+L++ + +V DFG AK+ +GRT L GT
Sbjct: 151 IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC----GT 202
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+APE ++ D ++ GV++ E+ G P QP
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 96/217 (44%), Gaps = 24/217 (11%)
Query: 96 TNNFEPASILGEGGFGRVF----KGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLH 151
++ ++ LG G +G V K ++ IK+ + L EV +L +L
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 152 HRNLVKLVGYYSSRDSSQHLLCYELVPNGSL--ESWLHGPLGVNCHLDWETRMKIALDAA 209
H N++KL ++ D + L E+ G L E L +D MK L
Sbjct: 63 HPNIMKLYEFFE--DKRNYYLVMEVYRGGELFDEIILRQKFS---EVDAAVIMKQVL--- 114
Query: 210 RGLAYLHEDSQPCVIHRDFKASNILLENNFH---AKVADFGLAKQAPEGRTNYLSTRVMG 266
G YLH+ + ++HRD K N+LLE+ K+ DFGL+ G + R +G
Sbjct: 115 SGTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG--GKMKER-LG 168
Query: 267 TFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
T Y+APE + K DV+S GV+L LL G P
Sbjct: 169 TAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCGYPP 204
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 96/202 (47%), Gaps = 17/202 (8%)
Query: 105 LGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQGDKEFLV-EVEMLSRLHHRNLVKLVGYY 162
+G+G G V+ + ++ G VAI+++ QQ KE ++ E+ ++ + N+V + Y
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQ-QQPKKELIINEILVMRENKNPNIVNYLDSY 87
Query: 163 SSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPC 222
D + + E + GSL + +D + + + L +LH +
Sbjct: 88 LVGD--ELWVVMEYLAGGSLTDVV-----TETCMDEGQIAAVCRECLQALEFLHSNQ--- 137
Query: 223 VIHRDFKASNILLENNFHAKVADFGLAKQ-APEGRTNYLSTRVMGTFGYVAPEYAMTGHL 281
VIHR+ K+ NILL + K+ DFG Q PE + ++GT ++APE
Sbjct: 138 VIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---STMVGTPYWMAPEVVTRKAY 194
Query: 282 LVKSDVYSYGVVLLELLTGRKP 303
K D++S G++ +E++ G P
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFLVEVEMLSR-LHHRN 154
+ FE LG G FGRV + G A+K L DK+ +V+++ + L+ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 94
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + +S +D+S + E VP G + S L + + R A
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR---IGRFSEPHARF-YAAQ 150
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N+L++ + +V DFG AK+ +GRT L GT
Sbjct: 151 IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC----GT 202
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+APE ++ D ++ GV++ E+ G P QP
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 91/210 (43%), Gaps = 15/210 (7%)
Query: 99 FEPASILGEGGFGRVFKGVLSDG-TAVAIKR--LTCGGQQGDKEFLVEVEMLSRLHHRNL 155
+E +GEG +G VFK + VA+KR L + L E+ +L L H+N+
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 156 VKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYL 215
V+L S + L +E + L+ + N LD E +GL +
Sbjct: 64 VRLHDVLHS--DKKLTLVFEFC-DQDLKKYFDS---CNGDLDPEIVKSFLFQLLKGLGFC 117
Query: 216 HEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEY 275
H + V+HRD K N+L+ N K+ADFGLA+ Y + V T Y P+
Sbjct: 118 HSRN---VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV--TLWYRPPDV 172
Query: 276 AMTGHLLVKS-DVYSYGVVLLELLTGRKPV 304
L S D++S G + EL +P+
Sbjct: 173 LFGAKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFLVEVEMLSR-LHHRN 154
+ FE LG G FGRV + G A+K L DK+ +V+++ + L+ +
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 86
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + +S +D+S + E VP G + S L + + R A
Sbjct: 87 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR---IGRFSEPHARF-YAAQ 142
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N+L++ + +V DFG AK+ +GRT L GT
Sbjct: 143 IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC----GT 194
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+APE ++ D ++ GV++ E+ G P QP
Sbjct: 195 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 236
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 100/222 (45%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFLVEVEMLSR-LHHRN 154
+ FE LG G FGRV + G A+K L DK+ +V+++ + L+ +
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 94
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+ + V + +S +D+S + E P G + S L + + R A
Sbjct: 95 IQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRR---IGRFSEPHARF-YAAQ 150
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N+L++ + KVADFG AK+ +GRT L GT
Sbjct: 151 IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAKRV-KGRTWXLC----GT 202
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+APE ++ D ++ GV++ E+ G P QP
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 93/213 (43%), Gaps = 25/213 (11%)
Query: 104 ILGEGGFGRVFKGVLSDGTAV-----AIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKL 158
LG+GGF + F+ +D V K L Q +K +E+ + L H+++V
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGF 80
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHED 218
G++ D + EL SL LH + E R + G YLH +
Sbjct: 81 HGFFEDNDFV--FVVLELCRRRSLLE-LHK--RRKALTEPEARYYLR-QIVLGCQYLHRN 134
Query: 219 SQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTR---VMGTFGYVAPE- 274
VIHRD K N+ L + K+ DFGLA + Y R + GT Y+APE
Sbjct: 135 R---VIHRDLKLGNLFLNEDLEVKIGDFGLAT-----KVEYDGERKKVLCGTPNYIAPEV 186
Query: 275 YAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMS 307
+ GH + DV+S G ++ LL G+ P + S
Sbjct: 187 LSKKGHSF-EVDVWSIGCIMYTLLVGKPPFETS 218
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 20/206 (9%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTC--GGQQGDKEFLVEVEMLSRLHHRNLVKLVGYY 162
L E G ++KG G + +K L + ++F E L H N++ ++G
Sbjct: 18 LNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGAC 76
Query: 163 SSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPC 222
S + L +P GSL + LH G N +D +K ALD ARG+A+LH +P
Sbjct: 77 QSPPAPHPTLITHWMPYGSLYNVLHE--GTNFVVDQSQAVKFALDMARGMAFLHT-LEPL 133
Query: 223 VIHRDFKASNILLENNFHAKV--ADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGH 280
+ + +++++ + A++ AD + Q+P GR M +VAPE
Sbjct: 134 IPRHALNSRSVMIDEDMTARISMADVKFSFQSP-GR--------MYAPAWVAPEALQKKP 184
Query: 281 LLVK---SDVYSYGVVLLELLTGRKP 303
+D++S+ V+L EL+T P
Sbjct: 185 EDTNRRSADMWSFAVLLWELVTREVP 210
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 95/212 (44%), Gaps = 14/212 (6%)
Query: 94 EATNNFEPASILGEGGFGRVFKGVLS-DGTAVAIK--RLTCGGQQGDKEFLVEVEMLSRL 150
E NF+ +GEG +G V+K G VA+K RL + + E+ +L L
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
+H N+VKL+ + + + L +E + + L+ ++ L L +
Sbjct: 67 NHPNIVKLLDVIHTEN--KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQ 121
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
GLA+ H V+HRD K N+L+ K+ADFGLA+ Y T + T Y
Sbjct: 122 GLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWY 176
Query: 271 VAPEYAM-TGHLLVKSDVYSYGVVLLELLTGR 301
APE + + D++S G + E++T R
Sbjct: 177 RAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 95/212 (44%), Gaps = 14/212 (6%)
Query: 94 EATNNFEPASILGEGGFGRVFKGVLS-DGTAVAIK--RLTCGGQQGDKEFLVEVEMLSRL 150
E NF+ +GEG +G V+K G VA+K RL + + E+ +L L
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 151 HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
+H N+VKL+ + + + L +E + + L+ ++ L L +
Sbjct: 67 NHPNIVKLLDVIHTEN--KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQ 121
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
GLA+ H V+HRD K N+L+ K+ADFGLA+ Y T + T Y
Sbjct: 122 GLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWY 176
Query: 271 VAPEYAM-TGHLLVKSDVYSYGVVLLELLTGR 301
APE + + D++S G + E++T R
Sbjct: 177 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 108/239 (45%), Gaps = 28/239 (11%)
Query: 98 NFEPASILGEGGFGRV--FKGVLSDGTAVAIKRL--TCGGQQGDKEFLVEVEMLSRLHHR 153
N+ +G+G F +V + +L+ G VAIK + T ++ EV ++ L+H
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILT-GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHP 74
Query: 154 NLVKLVGYYSSRDSSQHLLCYELVPNGSLESWL--HGPLGVNCHLDWETRMKIALDAARG 211
N+VKL + + L E G + +L HG + + E R K
Sbjct: 75 NIVKLFEVIETEKTL--YLIMEYASGGEVFDYLVAHGRMK-----EKEARSKFR-QIVSA 126
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYV 271
+ Y H Q ++HRD KA N+LL+ + + K+ADFG + + G G Y
Sbjct: 127 VQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK---LDAFCGAPPYA 180
Query: 272 APE-YAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRL 329
APE + + + DV+S GV+L L++G P D GQ NL +LR K R+
Sbjct: 181 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD-----GQ-NLKELRERVLRGKYRI 233
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSR-LHHRN 154
+ FE LG G FGRV + G A+K L DK+ +V+++ + L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + +S +D+S + E P G + S L + + R A
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR---IGRFSEPHARF-YAAQ 149
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N++++ + +V DFG AK+ +GRT L GT
Sbjct: 150 IVLTFEYLHSLD---LIYRDLKPENLMIDQQGYIQVTDFGFAKRV-KGRTWXLC----GT 201
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+APE ++ D ++ GV++ E+ G P QP
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 100/222 (45%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFLVEVEMLSR-LHHRN 154
+ FE LG G FGRV + G A+K L DK+ +V+++ + L+ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 94
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + +S +D+S + E P G + S L + + R A
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR---IGRFSEPHARF-YAAQ 150
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N++++ + KV DFG AK+ +GRT L GT
Sbjct: 151 IVLTFEYLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRV-KGRTWXLC----GT 202
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+APE ++ D ++ GV++ E+ G P QP
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 108/239 (45%), Gaps = 28/239 (11%)
Query: 98 NFEPASILGEGGFGRV--FKGVLSDGTAVAIKRL--TCGGQQGDKEFLVEVEMLSRLHHR 153
N+ +G+G F +V + +L+ G VA+K + T ++ EV + L+H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHP 73
Query: 154 NLVKLVGYYSSRDSSQHLLCYELVPNGSLESWL--HGPLGVNCHLDWETRMKIALDAARG 211
N+VKL + + L E G + +L HG + E R K
Sbjct: 74 NIVKLFEVIETEKTL--YLVXEYASGGEVFDYLVAHGRXK-----EKEARAKFR-QIVSA 125
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYV 271
+ Y H Q ++HRD KA N+LL+ + + K+ADFG + + G N L G Y
Sbjct: 126 VQYCH---QKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFG--NKLDA-FCGAPPYA 179
Query: 272 APE-YAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRL 329
APE + + + DV+S GV+L L++G P D GQ NL +LR K R+
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD-----GQ-NLKELRERVLRGKYRI 232
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 99/210 (47%), Gaps = 21/210 (10%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLT--CGGQQGDKEFLVEVEMLSRLHHRN 154
N +P +G + +L VAIK+L+ Q K E+ ++ ++H+N
Sbjct: 27 QNLKPIGSGAQGIVVAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKN 84
Query: 155 LVKLVGYYSSRDSSQHL----LCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
++ L+ ++ + S + + EL+ + +L + LD E +
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQ------VIQMELDHERMSYLLYQMLV 137
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
G+ +LH +IHRD K SNI+++++ K+ DFGLA+ A T+++ T + T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTG 300
APE + D++S GV++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 93/222 (41%), Gaps = 14/222 (6%)
Query: 105 LGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFL-VEVEMLSRLHHRNLVKLVGYY 162
LG G FG V S G IK + Q E + E+E+L L H N++K+ +
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 163 SSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPC 222
D + E G L + L ++ LAY H
Sbjct: 90 --EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH--- 144
Query: 223 VIHRDFKASNILLENNF-HA--KVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTG 279
V+H+D K NIL ++ H+ K+ DFGLA+ +++ ST GT Y+APE
Sbjct: 145 VVHKDLKPENILFQDTSPHSPIKIIDFGLAELF---KSDEHSTNAAGTALYMAPE-VFKR 200
Query: 280 HLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARP 321
+ K D++S GVV+ LLTG P + + T+ P
Sbjct: 201 DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEP 242
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 28/230 (12%)
Query: 97 NNFEPASILGEGGFGRVFK----GVLSDGTA--VAIKRLTCGGQQGDKEFLV-EVEMLSR 149
N LG G FG+V + G++ A VA+K L ++E L+ E+++LS
Sbjct: 39 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 98
Query: 150 L-HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPL-GVNCHLDWETRM----- 202
L +H N+V L+G + L+ E G L ++L C M
Sbjct: 99 LGNHMNIVNLLG--ACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDEL 156
Query: 203 --------KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
+ A+G+A+L S+ C IHRD A NILL + K+ DFGLA+
Sbjct: 157 ALDLEDLLSFSYQVAKGMAFLA--SKNC-IHRDLAARNILLTHGRITKICDFGLARDIKN 213
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 303
+ ++APE +SDV+SYG+ L EL + G P
Sbjct: 214 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 263
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 22/203 (10%)
Query: 105 LGEGGFGR-VFKGVLSDGTAVAIKRLTCG--GQQGDKEFLVEVEMLSRLHHRNLVKLVGY 161
+GEG FG+ + DG IK + + +E EV +L+ + H N+V+ Y
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQ---Y 88
Query: 162 YSSRDSSQHL-LCYELVPNGSLESWLHGPLGV----NCHLDWETRMKIALDAARGLAYLH 216
S + + L + + G L ++ GV + LDW ++ +AL ++H
Sbjct: 89 RESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALK------HVH 142
Query: 217 EDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYA 276
+ ++HRD K+ NI L + ++ DFG+A+ T L+ +GT Y++PE
Sbjct: 143 DRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVL--NSTVELARACIGTPYYLSPEIC 197
Query: 277 MTGHLLVKSDVYSYGVVLLELLT 299
KSD+++ G VL EL T
Sbjct: 198 ENKPYNNKSDIWALGCVLYELCT 220
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 99/210 (47%), Gaps = 21/210 (10%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLT--CGGQQGDKEFLVEVEMLSRLHHRN 154
N +P +G + +L VAIK+L+ Q K E+ ++ ++H+N
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKN 84
Query: 155 LVKLVGYYSSRDSSQHL----LCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
++ L+ ++ + S + + EL+ + +L + LD E +
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQ------VIQMELDHERMSYLLYQMLV 137
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
G+ +LH +IHRD K SNI+++++ K+ DFGLA+ A T+++ T + T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTG 300
APE + D++S GV++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 120/300 (40%), Gaps = 46/300 (15%)
Query: 97 NNFEPASILGEGGFGRVFK----GVLSDGTA--VAIKRLTCGGQQGDKEFLV-EVEMLSR 149
N LG G FG+V + G++ A VA+K L ++E L+ E+++LS
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 150 L-HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPL-GVNCHLDWETRM----- 202
L +H N+V L+G + L+ E G L ++L C M
Sbjct: 83 LGNHMNIVNLLG--ACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDEL 140
Query: 203 --------KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
+ A+G+A+L S+ C IHRD A NILL + K+ DFGLA+
Sbjct: 141 ALDLEDLLSFSYQVAKGMAFLA--SKNC-IHRDLAARNILLTHGRITKICDFGLARDIKN 197
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPV-DMSQPSGQ 312
+ ++APE +SDV+SYG+ L EL + G P M S
Sbjct: 198 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF 257
Query: 313 ENLVTWARPILRDKDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQ 372
++ +L + E+ D I C + +RPT ++VQ
Sbjct: 258 YKMIKEGFRMLSPEHAPAEMYD-----------------IMKTCWDADPLKRPTFKQIVQ 300
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 122/303 (40%), Gaps = 46/303 (15%)
Query: 97 NNFEPASILGEGGFGRVFK----GVLSDGTA--VAIKRLTCGGQQGDKEFLV-EVEMLSR 149
N LG G FG+V + G++ A VA+K L ++E L+ E+++LS
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 150 L-HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPL-GVNCHLDWETRM----- 202
L +H N+V L+G + L+ E G L ++L C M
Sbjct: 106 LGNHMNIVNLLG--ACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDEL 163
Query: 203 --------KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
+ A+G+A+L S+ C IHRD A NILL + K+ DFGLA+
Sbjct: 164 ALDLEDLLSFSYQVAKGMAFL--ASKNC-IHRDLAARNILLTHGRITKICDFGLARHIKN 220
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPV-DMSQPSGQ 312
+ ++APE +SDV+SYG+ L EL + G P M S
Sbjct: 221 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF 280
Query: 313 ENLVTWARPILRDKDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQ 372
++ +L + E+ D I C + +RPT ++VQ
Sbjct: 281 YKMIKEGFRMLSPEHAPAEMYD-----------------IMKTCWDADPLKRPTFKQIVQ 323
Query: 373 SLK 375
++
Sbjct: 324 LIE 326
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 93/213 (43%), Gaps = 27/213 (12%)
Query: 98 NFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQG--DKEFLVEVEMLSRLHHRN 154
+E +GEG +G VFK D G VAIK+ K L E+ ML +L H N
Sbjct: 4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPN 63
Query: 155 LVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAY 214
LV L+ + R HL+ +E + L GV HL I + + +
Sbjct: 64 LVNLLEVFR-RKRRLHLV-FEYCDHTVLHELDRYQRGVPEHL----VKSITWQTLQAVNF 117
Query: 215 LHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPE 274
H+ + IHRD K NIL+ + K+ DFG A+ G ++Y V T Y +PE
Sbjct: 118 CHKHN---CIHRDVKPENILITKHSVIKLCDFGFARLL-TGPSDYYDDEV-ATRWYRSPE 172
Query: 275 YAMTGHLLVKS-------DVYSYGVVLLELLTG 300
LLV DV++ G V ELL+G
Sbjct: 173 ------LLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 28/230 (12%)
Query: 97 NNFEPASILGEGGFGRVFK----GVLSDGTA--VAIKRLTCGGQQGDKEFLV-EVEMLSR 149
N LG G FG+V + G++ A VA+K L ++E L+ E+++LS
Sbjct: 41 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 100
Query: 150 L-HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPL-GVNCHLDWETRM----- 202
L +H N+V L+G + L+ E G L ++L C M
Sbjct: 101 LGNHMNIVNLLG--ACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDEL 158
Query: 203 --------KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
+ A+G+A+L S+ C IHRD A NILL + K+ DFGLA+
Sbjct: 159 ALDLEDLLSFSYQVAKGMAFL--ASKNC-IHRDLAARNILLTHGRITKICDFGLARDIKN 215
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 303
+ ++APE +SDV+SYG+ L EL + G P
Sbjct: 216 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 265
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 14/208 (6%)
Query: 98 NFEPASILGEGGFGRVFKGVLS-DGTAVAIK--RLTCGGQQGDKEFLVEVEMLSRLHHRN 154
NF+ +GEG +G V+K G VA+K RL + + E+ +L L+H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 155 LVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAY 214
+VKL+ + + + L +E V + L++++ L L +GLA+
Sbjct: 63 IVKLLDVIHTEN--KLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQL--LQGLAF 117
Query: 215 LHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPE 274
H V+HRD K N+L+ K+ADFGLA+ Y T + T Y APE
Sbjct: 118 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPE 172
Query: 275 YAM-TGHLLVKSDVYSYGVVLLELLTGR 301
+ + D++S G + E++T R
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 82/165 (49%), Gaps = 16/165 (9%)
Query: 143 EVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRM 202
EV +L ++ H N++ L Y +R + +L ELV G L +L ++ + + +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENR--TDVVLILELVSGGELFDFLAQKESLSEE-EATSFI 121
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNI-LLENNF---HAKVADFGLAKQAPEGRTN 258
K LD G+ YLH + H D K NI LL+ N H K+ DFGLA + +G
Sbjct: 122 KQILD---GVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE- 174
Query: 259 YLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
+ GT +VAPE L +++D++S GV+ LL+G P
Sbjct: 175 --FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 98 NFEPASILGEGGFGRVFKGVLS-DGTAVAIK--RLTCGGQQGDKEFLVEVEMLSRLHHRN 154
NF+ +GEG +G V+K G VA+K RL + + E+ +L L+H N
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 67
Query: 155 LVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAY 214
+VKL+ + + + L +E + + L+ ++ L L +GLA+
Sbjct: 68 IVKLLDVIHTEN--KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAF 122
Query: 215 LHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPE 274
H V+HRD K N+L+ K+ADFGLA+ Y T + T Y APE
Sbjct: 123 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPE 177
Query: 275 YAM-TGHLLVKSDVYSYGVVLLELLTGR 301
+ + D++S G + E++T R
Sbjct: 178 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 90/201 (44%), Gaps = 18/201 (8%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIK--RLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYY 162
+GEG +G V+K + G A+K RL + + E+ +L L H N+VKL Y
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL--YD 67
Query: 163 SSRDSSQHLLCYELVPNGSLESWLHGPLGVNCH--LDWETRMKIALDAARGLAYLHEDSQ 220
+ +L +E L+ L L V C L+ T L G+AY H+
Sbjct: 68 VIHTKKRLVLVFE-----HLDQDLKKLLDV-CEGGLESVTAKSFLLQLLNGIAYCHDRR- 120
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAM-TG 279
V+HRD K N+L+ K+ADFGLA+ Y T + T Y AP+ M +
Sbjct: 121 --VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEIVTLWYRAPDVLMGSK 176
Query: 280 HLLVKSDVYSYGVVLLELLTG 300
D++S G + E++ G
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNG 197
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 95/211 (45%), Gaps = 14/211 (6%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLS-DGTAVAIK--RLTCGGQQGDKEFLVEVEMLSRLH 151
+ NF+ +GEG +G V+K G VA+K RL + + E+ +L L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 152 HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARG 211
H N+VKL+ + + + L +E + + L++++ L L +G
Sbjct: 64 HPNIVKLLDVIHTEN--KLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQL--LQG 118
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYV 271
LA+ H V+HRD K N+L+ K+ADFGLA+ Y V T Y
Sbjct: 119 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 173
Query: 272 APEYAM-TGHLLVKSDVYSYGVVLLELLTGR 301
APE + + D++S G + E++T R
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 82/165 (49%), Gaps = 16/165 (9%)
Query: 143 EVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRM 202
EV +L ++ H N++ L Y +R + +L ELV G L +L ++ + + +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENR--TDVVLILELVSGGELFDFLAQKESLSEE-EATSFI 121
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNI-LLENNF---HAKVADFGLAKQAPEGRTN 258
K LD G+ YLH + H D K NI LL+ N H K+ DFGLA + +G
Sbjct: 122 KQILD---GVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE- 174
Query: 259 YLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
+ GT +VAPE L +++D++S GV+ LL+G P
Sbjct: 175 --FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 122/303 (40%), Gaps = 46/303 (15%)
Query: 97 NNFEPASILGEGGFGRVFK----GVLSDGTA--VAIKRLTCGGQQGDKEFLV-EVEMLSR 149
N LG G FG+V + G++ A VA+K L ++E L+ E+++LS
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 150 L-HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPL-GVNCHLDWETRM----- 202
L +H N+V L+G + L+ E G L ++L C M
Sbjct: 106 LGNHMNIVNLLG--ACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDEL 163
Query: 203 --------KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPE 254
+ A+G+A+L S+ C IHRD A NILL + K+ DFGLA+
Sbjct: 164 ALDLEDLLSFSYQVAKGMAFLA--SKNC-IHRDLAARNILLTHGRITKICDFGLARDIKN 220
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPV-DMSQPSGQ 312
+ ++APE +SDV+SYG+ L EL + G P M S
Sbjct: 221 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF 280
Query: 313 ENLVTWARPILRDKDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQ 372
++ +L + E+ D I C + +RPT ++VQ
Sbjct: 281 YKMIKEGFRMLSPEHAPAEMYD-----------------IMKTCWDADPLKRPTFKQIVQ 323
Query: 373 SLK 375
++
Sbjct: 324 LIE 326
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 98 NFEPASILGEGGFGRVFKGVLS-DGTAVAIK--RLTCGGQQGDKEFLVEVEMLSRLHHRN 154
NF+ +GEG +G V+K G VA+K RL + + E+ +L L+H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 155 LVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAY 214
+VKL+ + + + L +E + + L+ ++ L L +GLA+
Sbjct: 64 IVKLLDVIHTEN--KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAF 118
Query: 215 LHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPE 274
H V+HRD K N+L+ K+ADFGLA+ Y T + T Y APE
Sbjct: 119 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPE 173
Query: 275 YAM-TGHLLVKSDVYSYGVVLLELLTGR 301
+ + D++S G + E++T R
Sbjct: 174 ILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 95/211 (45%), Gaps = 14/211 (6%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLS-DGTAVAIK--RLTCGGQQGDKEFLVEVEMLSRLH 151
+ NF+ +GEG +G V+K G VA+K RL + + E+ +L L+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 152 HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARG 211
H N+VKL+ + + + L +E + + L+ ++ L L +G
Sbjct: 62 HPNIVKLLDVIHTEN--KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQG 116
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYV 271
LA+ H V+HRD K N+L+ K+ADFGLA+ Y T + T Y
Sbjct: 117 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYR 171
Query: 272 APEYAM-TGHLLVKSDVYSYGVVLLELLTGR 301
APE + + D++S G + E++T R
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 82/165 (49%), Gaps = 16/165 (9%)
Query: 143 EVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRM 202
EV +L ++ H N++ L Y +R + +L ELV G L +L ++ + + +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENR--TDVVLILELVSGGELFDFLAQKESLSEE-EATSFI 121
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNI-LLENNF---HAKVADFGLAKQAPEGRTN 258
K LD G+ YLH + H D K NI LL+ N H K+ DFGLA + +G
Sbjct: 122 KQILD---GVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE- 174
Query: 259 YLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
+ GT +VAPE L +++D++S GV+ LL+G P
Sbjct: 175 --FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 98 NFEPASILGEGGFGRVFKGVLS-DGTAVAIK--RLTCGGQQGDKEFLVEVEMLSRLHHRN 154
NF+ +GEG +G V+K G VA+K RL + + E+ +L L+H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 155 LVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAY 214
+VKL+ + + + L +E + + L+ ++ L L +GLA+
Sbjct: 64 IVKLLDVIHTEN--KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAF 118
Query: 215 LHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPE 274
H V+HRD K N+L+ K+ADFGLA+ Y T + T Y APE
Sbjct: 119 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPE 173
Query: 275 YAM-TGHLLVKSDVYSYGVVLLELLTGR 301
+ + D++S G + E++T R
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 98 NFEPASILGEGGFGRVFKGVLS-DGTAVAIK--RLTCGGQQGDKEFLVEVEMLSRLHHRN 154
NF+ +GEG +G V+K G VA+K RL + + E+ +L L+H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 155 LVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAY 214
+VKL+ + + + L +E + + L+ ++ L L +GLA+
Sbjct: 63 IVKLLDVIHTEN--KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAF 117
Query: 215 LHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPE 274
H V+HRD K N+L+ K+ADFGLA+ Y T + T Y APE
Sbjct: 118 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPE 172
Query: 275 YAM-TGHLLVKSDVYSYGVVLLELLTGR 301
+ + D++S G + E++T R
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 98 NFEPASILGEGGFGRVFKGVLS-DGTAVAIK--RLTCGGQQGDKEFLVEVEMLSRLHHRN 154
NF+ +GEG +G V+K G VA+K RL + + E+ +L L+H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 155 LVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAY 214
+VKL+ + + + L +E + + L+ ++ L L +GLA+
Sbjct: 63 IVKLLDVIHTEN--KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAF 117
Query: 215 LHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPE 274
H V+HRD K N+L+ K+ADFGLA+ Y T + T Y APE
Sbjct: 118 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPE 172
Query: 275 YAM-TGHLLVKSDVYSYGVVLLELLTGR 301
+ + D++S G + E++T R
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 90/201 (44%), Gaps = 18/201 (8%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIK--RLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYY 162
+GEG +G V+K + G A+K RL + + E+ +L L H N+VKL Y
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL--YD 67
Query: 163 SSRDSSQHLLCYELVPNGSLESWLHGPLGVNCH--LDWETRMKIALDAARGLAYLHEDSQ 220
+ +L +E L+ L L V C L+ T L G+AY H+
Sbjct: 68 VIHTKKRLVLVFE-----HLDQDLKKLLDV-CEGGLESVTAKSFLLQLLNGIAYCHDRR- 120
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAM-TG 279
V+HRD K N+L+ K+ADFGLA+ Y T + T Y AP+ M +
Sbjct: 121 --VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEVVTLWYRAPDVLMGSK 176
Query: 280 HLLVKSDVYSYGVVLLELLTG 300
D++S G + E++ G
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 90/201 (44%), Gaps = 18/201 (8%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIK--RLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYY 162
+GEG +G V+K + G A+K RL + + E+ +L L H N+VKL Y
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL--YD 67
Query: 163 SSRDSSQHLLCYELVPNGSLESWLHGPLGVNCH--LDWETRMKIALDAARGLAYLHEDSQ 220
+ +L +E L+ L L V C L+ T L G+AY H+
Sbjct: 68 VIHTKKRLVLVFE-----HLDQDLKKLLDV-CEGGLESVTAKSFLLQLLNGIAYCHDRR- 120
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAM-TG 279
V+HRD K N+L+ K+ADFGLA+ Y T + T Y AP+ M +
Sbjct: 121 --VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEVVTLWYRAPDVLMGSK 176
Query: 280 HLLVKSDVYSYGVVLLELLTG 300
D++S G + E++ G
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNG 197
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 82/165 (49%), Gaps = 16/165 (9%)
Query: 143 EVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRM 202
EV +L ++ H N++ L Y +R + +L ELV G L +L ++ + + +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENR--TDVVLILELVSGGELFDFLAQKESLSEE-EATSFI 121
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNI-LLENNF---HAKVADFGLAKQAPEGRTN 258
K LD G+ YLH + H D K NI LL+ N H K+ DFGLA + +G
Sbjct: 122 KQILD---GVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE- 174
Query: 259 YLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
+ GT +VAPE L +++D++S GV+ LL+G P
Sbjct: 175 --FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 98 NFEPASILGEGGFGRVFKGVLS-DGTAVAIK--RLTCGGQQGDKEFLVEVEMLSRLHHRN 154
NF+ +GEG +G V+K G VA+K RL + + E+ +L L+H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 155 LVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAY 214
+VKL+ + + + L +E + + L+ ++ L L +GLA+
Sbjct: 64 IVKLLDVIHTEN--KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAF 118
Query: 215 LHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPE 274
H V+HRD K N+L+ K+ADFGLA+ Y T + T Y APE
Sbjct: 119 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPE 173
Query: 275 YAM-TGHLLVKSDVYSYGVVLLELLTGR 301
+ + D++S G + E++T R
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 82/165 (49%), Gaps = 16/165 (9%)
Query: 143 EVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRM 202
EV +L ++ H N++ L Y +R + +L ELV G L +L ++ + + +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENR--TDVVLILELVSGGELFDFLAQKESLSEE-EATSFI 121
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNI-LLENNF---HAKVADFGLAKQAPEGRTN 258
K LD G+ YLH + H D K NI LL+ N H K+ DFGLA + +G
Sbjct: 122 KQILD---GVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE- 174
Query: 259 YLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
+ GT +VAPE L +++D++S GV+ LL+G P
Sbjct: 175 --FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 100/212 (47%), Gaps = 29/212 (13%)
Query: 105 LGEGGFGRVFKGVLS-DGTAVAIKRLTCGGQQGDKEFLV------EVEMLSRLHHRNLVK 157
LG G FG+V G G VA+K L +Q + V E++ L H +++K
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILN---RQKIRSLDVVGKIKREIQNLKLFRHPHIIK 75
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWL--HGPLGVNCHLDWETRMKIALDAARGLAYL 215
L S+ + + E V G L ++ HG + + E R ++ + Y
Sbjct: 76 LYQVIST--PTDFFMVMEYVSGGELFDYICKHGRVE-----EMEAR-RLFQQILSAVDYC 127
Query: 216 HEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEY 275
H + V+HRD K N+LL+ + +AK+ADFGL+ +G +L G+ Y APE
Sbjct: 128 H---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG--EFLRDSC-GSPNYAAPE- 180
Query: 276 AMTGHLLV--KSDVYSYGVVLLELLTGRKPVD 305
++G L + D++S GV+L LL G P D
Sbjct: 181 VISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 103/225 (45%), Gaps = 34/225 (15%)
Query: 143 EVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRM 202
E+E+L +L+H ++K+ ++ + D + + EL+ G L + G N L T
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAED---YYIVLELMEGGELFDKVVG----NKRLKEATCK 117
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILL---ENNFHAKVADFGLAKQAPEGRTNY 259
+ YLHE+ +IHRD K N+LL E + K+ DFG +K G T+
Sbjct: 118 LYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSL 172
Query: 260 LSTRVMGTFGYVAPEYAM---TGHLLVKSDVYSYGVVLLELLTGRKPVDMSQ-------- 308
+ T + GT Y+APE + T D +S GV+L L+G P +
Sbjct: 173 MRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQ 231
Query: 309 -PSGQENLV--TWARPILRDKDRLEEL--ADPRLGGKYPKEDFIR 348
SG+ N + WA + D +++L DP+ ++ E+ +R
Sbjct: 232 ITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPK--ARFTTEEALR 274
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 82/165 (49%), Gaps = 16/165 (9%)
Query: 143 EVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRM 202
EV +L ++ H N++ L Y +R + +L ELV G L +L ++ + + +
Sbjct: 65 EVSILRQVLHPNIITLHDVYENR--TDVVLILELVSGGELFDFLAQKESLSEE-EATSFI 121
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNI-LLENNF---HAKVADFGLAKQAPEGRTN 258
K LD G+ YLH + H D K NI LL+ N H K+ DFGLA + +G
Sbjct: 122 KQILD---GVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE- 174
Query: 259 YLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
+ GT +VAPE L +++D++S GV+ LL+G P
Sbjct: 175 --FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 14/211 (6%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLS-DGTAVAIK--RLTCGGQQGDKEFLVEVEMLSRLH 151
+ NF+ +GEG +G V+K G VA+K RL + + E+ +L L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 152 HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARG 211
H N+VKL+ + + + L +E + + L+ ++ L L +G
Sbjct: 64 HPNIVKLLDVIHTEN--KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQG 118
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYV 271
LA+ H V+HRD K N+L+ K+ADFGLA+ Y V T Y
Sbjct: 119 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 173
Query: 272 APEYAM-TGHLLVKSDVYSYGVVLLELLTGR 301
APE + + D++S G + E++T R
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 14/211 (6%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLS-DGTAVAIK--RLTCGGQQGDKEFLVEVEMLSRLH 151
+ NF+ +GEG +G V+K G VA+K RL + + E+ +L L+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 152 HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARG 211
H N+VKL+ + + + L +E + + L+ ++ L L +G
Sbjct: 63 HPNIVKLLDVIHTEN--KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQG 117
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYV 271
LA+ H V+HRD K N+L+ K+ADFGLA+ Y V T Y
Sbjct: 118 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 172
Query: 272 APEYAM-TGHLLVKSDVYSYGVVLLELLTGR 301
APE + + D++S G + E++T R
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 14/211 (6%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLS-DGTAVAIK--RLTCGGQQGDKEFLVEVEMLSRLH 151
+ NF+ +GEG +G V+K G VA+K RL + + E+ +L L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 152 HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARG 211
H N+VKL+ + + + L +E + + L+ ++ L L +G
Sbjct: 61 HPNIVKLLDVIHTEN--KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQG 115
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYV 271
LA+ H V+HRD K N+L+ K+ADFGLA+ Y V T Y
Sbjct: 116 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 170
Query: 272 APEYAM-TGHLLVKSDVYSYGVVLLELLTGR 301
APE + + D++S G + E++T R
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 103/225 (45%), Gaps = 34/225 (15%)
Query: 143 EVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRM 202
E+E+L +L+H ++K+ ++ + D + + EL+ G L + G N L T
Sbjct: 64 EIEILKKLNHPCIIKIKNFFDAED---YYIVLELMEGGELFDKVVG----NKRLKEATCK 116
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILL---ENNFHAKVADFGLAKQAPEGRTNY 259
+ YLHE+ +IHRD K N+LL E + K+ DFG +K G T+
Sbjct: 117 LYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSL 171
Query: 260 LSTRVMGTFGYVAPEYAM---TGHLLVKSDVYSYGVVLLELLTGRKPVDMSQ-------- 308
+ T + GT Y+APE + T D +S GV+L L+G P +
Sbjct: 172 MRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQ 230
Query: 309 -PSGQENLV--TWARPILRDKDRLEEL--ADPRLGGKYPKEDFIR 348
SG+ N + WA + D +++L DP+ ++ E+ +R
Sbjct: 231 ITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPK--ARFTTEEALR 273
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 14/211 (6%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLS-DGTAVAIK--RLTCGGQQGDKEFLVEVEMLSRLH 151
+ NF+ +GEG +G V+K G VA+K RL + + E+ +L L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 152 HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARG 211
H N+VKL+ + + + L +E + + L+ ++ L L +G
Sbjct: 61 HPNIVKLLDVIHTEN--KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQG 115
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYV 271
LA+ H V+HRD K N+L+ K+ADFGLA+ Y V T Y
Sbjct: 116 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 170
Query: 272 APEYAM-TGHLLVKSDVYSYGVVLLELLTGR 301
APE + + D++S G + E++T R
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 94/211 (44%), Gaps = 14/211 (6%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLS-DGTAVAIK--RLTCGGQQGDKEFLVEVEMLSRLH 151
+ NF+ +GEG +G V+K G VA+K RL + + E+ +L L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 152 HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARG 211
H N+VKL+ + + + L +E V + L+ ++ L L +G
Sbjct: 64 HPNIVKLLDVIHTEN--KLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQL--LQG 118
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYV 271
LA+ H V+HRD K N+L+ K+ADFGLA+ Y V T Y
Sbjct: 119 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 173
Query: 272 APEYAM-TGHLLVKSDVYSYGVVLLELLTGR 301
APE + + D++S G + E++T R
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 100/222 (45%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSR-LHHRN 154
+ FE LG G FGRV + G A+K L DK+ +V+++ + L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + +S +D+S + E V G + S L + + R A
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---IGRFSEPHARF-YAAQ 149
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N+L++ + +V DFG AK+ +GRT L GT
Sbjct: 150 IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC----GT 201
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+APE ++ D ++ GV++ E+ G P QP
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 14/211 (6%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLS-DGTAVAIK--RLTCGGQQGDKEFLVEVEMLSRLH 151
+ NF+ +GEG +G V+K G VA+K RL + + E+ +L L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 152 HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARG 211
H N+VKL+ + + + L +E + + L+ ++ L L +G
Sbjct: 61 HPNIVKLLDVIHTEN--KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQG 115
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYV 271
LA+ H V+HRD K N+L+ K+ADFGLA+ Y V T Y
Sbjct: 116 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 170
Query: 272 APEYAM-TGHLLVKSDVYSYGVVLLELLTGR 301
APE + + D++S G + E++T R
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 14/211 (6%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLS-DGTAVAIK--RLTCGGQQGDKEFLVEVEMLSRLH 151
+ NF+ +GEG +G V+K G VA+K RL + + E+ +L L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 152 HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARG 211
H N+VKL+ + + + L +E + + L+ ++ L L +G
Sbjct: 61 HPNIVKLLDVIHTEN--KLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQL--LQG 115
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYV 271
LA+ H V+HRD K N+L+ K+ADFGLA+ Y V T Y
Sbjct: 116 LAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 170
Query: 272 APEYAM-TGHLLVKSDVYSYGVVLLELLTGR 301
APE + + D++S G + E++T R
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 103/225 (45%), Gaps = 34/225 (15%)
Query: 143 EVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRM 202
E+E+L +L+H ++K+ ++ + D + + EL+ G L + G N L T
Sbjct: 71 EIEILKKLNHPCIIKIKNFFDAED---YYIVLELMEGGELFDKVVG----NKRLKEATCK 123
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILL---ENNFHAKVADFGLAKQAPEGRTNY 259
+ YLHE+ +IHRD K N+LL E + K+ DFG +K G T+
Sbjct: 124 LYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSL 178
Query: 260 LSTRVMGTFGYVAPEYAM---TGHLLVKSDVYSYGVVLLELLTGRKPVDMSQ-------- 308
+ T + GT Y+APE + T D +S GV+L L+G P +
Sbjct: 179 MRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQ 237
Query: 309 -PSGQENLV--TWARPILRDKDRLEEL--ADPRLGGKYPKEDFIR 348
SG+ N + WA + D +++L DP+ ++ E+ +R
Sbjct: 238 ITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPK--ARFTTEEALR 280
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 14/211 (6%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLS-DGTAVAIK--RLTCGGQQGDKEFLVEVEMLSRLH 151
+ NF+ +GEG +G V+K G VA+K RL + + E+ +L L+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 152 HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARG 211
H N+VKL+ + + + L +E + + L+ ++ L L +G
Sbjct: 63 HPNIVKLLDVIHTEN--KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQG 117
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYV 271
LA+ H V+HRD K N+L+ K+ADFGLA+ Y V T Y
Sbjct: 118 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 172
Query: 272 APEYAM-TGHLLVKSDVYSYGVVLLELLTGR 301
APE + + D++S G + E++T R
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 103/225 (45%), Gaps = 34/225 (15%)
Query: 143 EVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRM 202
E+E+L +L+H ++K+ ++ + D + + EL+ G L + G N L T
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAED---YYIVLELMEGGELFDKVVG----NKRLKEATCK 117
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILL---ENNFHAKVADFGLAKQAPEGRTNY 259
+ YLHE+ +IHRD K N+LL E + K+ DFG +K G T+
Sbjct: 118 LYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSL 172
Query: 260 LSTRVMGTFGYVAPEYAM---TGHLLVKSDVYSYGVVLLELLTGRKPVDMSQ-------- 308
+ T + GT Y+APE + T D +S GV+L L+G P +
Sbjct: 173 MRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQ 231
Query: 309 -PSGQENLV--TWARPILRDKDRLEEL--ADPRLGGKYPKEDFIR 348
SG+ N + WA + D +++L DP+ ++ E+ +R
Sbjct: 232 ITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPK--ARFTTEEALR 274
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 103/225 (45%), Gaps = 34/225 (15%)
Query: 143 EVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRM 202
E+E+L +L+H ++K+ ++ + D + + EL+ G L + G N L T
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAED---YYIVLELMEGGELFDKVVG----NKRLKEATCK 117
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILL---ENNFHAKVADFGLAKQAPEGRTNY 259
+ YLHE+ +IHRD K N+LL E + K+ DFG +K G T+
Sbjct: 118 LYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSL 172
Query: 260 LSTRVMGTFGYVAPEYAM---TGHLLVKSDVYSYGVVLLELLTGRKPVDMSQ-------- 308
+ T + GT Y+APE + T D +S GV+L L+G P +
Sbjct: 173 MRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQ 231
Query: 309 -PSGQENLV--TWARPILRDKDRLEEL--ADPRLGGKYPKEDFIR 348
SG+ N + WA + D +++L DP+ ++ E+ +R
Sbjct: 232 ITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPK--ARFTTEEALR 274
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 110/268 (41%), Gaps = 42/268 (15%)
Query: 91 ELKEATNNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGD-----------KE 139
EL + + + G +G V GV S+G VAIKR+ G K
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 140 FLVEVEMLSRLHHRNLVKLVGYYSS-RDSSQH--LLCYELVPNGSLESWLHGPLGVNCHL 196
L E+ +L+ HH N++ L + + + H L EL+ L +H V
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQ 134
Query: 197 DWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQ--APE 254
+ M L GL LHE V+HRD NILL +N + DF LA++ A
Sbjct: 135 HIQYFMYHIL---LGLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAREDTADA 188
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTGHLLVK-SDVYSYGVVLLELLTGR------------ 301
+T+Y++ R Y APE M K D++S G V+ E+ +
Sbjct: 189 NKTHYVTHR-----WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQL 243
Query: 302 -KPVDMSQPSGQENLVTWARPILRDKDR 328
K V++ E++V ++ P RD R
Sbjct: 244 NKIVEVVGTPKIEDVVMFSSPSARDYLR 271
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 110/268 (41%), Gaps = 42/268 (15%)
Query: 91 ELKEATNNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGD-----------KE 139
EL + + + G +G V GV S+G VAIKR+ G K
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 140 FLVEVEMLSRLHHRNLVKLVGYYSS-RDSSQH--LLCYELVPNGSLESWLHGPLGVNCHL 196
L E+ +L+ HH N++ L + + + H L EL+ L +H V
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQ 134
Query: 197 DWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQ--APE 254
+ M L GL LHE V+HRD NILL +N + DF LA++ A
Sbjct: 135 HIQYFMYHIL---LGLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAREDTADA 188
Query: 255 GRTNYLSTRVMGTFGYVAPEYAMTGHLLVK-SDVYSYGVVLLELLTGR------------ 301
+T+Y++ R Y APE M K D++S G V+ E+ +
Sbjct: 189 NKTHYVTHR-----WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQL 243
Query: 302 -KPVDMSQPSGQENLVTWARPILRDKDR 328
K V++ E++V ++ P RD R
Sbjct: 244 NKIVEVVGTPKIEDVVMFSSPSARDYLR 271
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 19/158 (12%)
Query: 104 ILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLH-HRNLVKL--- 158
+L EGGF V++ + G A+KRL ++ ++ + EV + +L H N+V+
Sbjct: 35 VLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSA 94
Query: 159 --VGYYSSRDSSQHLLCYELVPNGSLESWL-----HGPLGVNCHLDWETRMKIALDAARG 211
+G S L + G L +L GPL + T +KI R
Sbjct: 95 ASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCD------TVLKIFYQTCRA 148
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLA 249
+ ++H +P +IHRD K N+LL N K+ DFG A
Sbjct: 149 VQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 14/211 (6%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLS-DGTAVAIK--RLTCGGQQGDKEFLVEVEMLSRLH 151
+ NF+ +GEG +G V+K G VA+K RL + + E+ +L L+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 152 HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARG 211
H N+VKL+ + + + L +E + + L+ ++ L L +G
Sbjct: 63 HPNIVKLLDVIHTEN--KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQG 117
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYV 271
LA+ H V+HRD K N+L+ K+ADFGLA+ Y V T Y
Sbjct: 118 LAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 172
Query: 272 APEYAM-TGHLLVKSDVYSYGVVLLELLTGR 301
APE + + D++S G + E++T R
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 93/208 (44%), Gaps = 14/208 (6%)
Query: 98 NFEPASILGEGGFGRVFKGVLS-DGTAVAIK--RLTCGGQQGDKEFLVEVEMLSRLHHRN 154
NF+ +GEG +G V+K G VA+K RL + + E+ +L L+H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 155 LVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAY 214
+VKL+ + + + L +E + + L+ ++ L L +GLA+
Sbjct: 63 IVKLLDVIHTEN--KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAF 117
Query: 215 LHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPE 274
H V+HRD K N+L+ K+ADFGLA+ Y V T Y APE
Sbjct: 118 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPE 172
Query: 275 YAM-TGHLLVKSDVYSYGVVLLELLTGR 301
+ + D++S G + E++T R
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 14/211 (6%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLS-DGTAVAIK--RLTCGGQQGDKEFLVEVEMLSRLH 151
+ NF+ +GEG +G V+K G VA+K RL + + E+ +L L+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 152 HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARG 211
H N+VKL+ + + + L +E + + L+ ++ L L +G
Sbjct: 62 HPNIVKLLDVIHTEN--KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQG 116
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYV 271
LA+ H V+HRD K N+L+ K+ADFGLA+ Y V T Y
Sbjct: 117 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 171
Query: 272 APEYAM-TGHLLVKSDVYSYGVVLLELLTGR 301
APE + + D++S G + E++T R
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 14/211 (6%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLS-DGTAVAIK--RLTCGGQQGDKEFLVEVEMLSRLH 151
+ NF+ +GEG +G V+K G VA+K RL + + E+ +L L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 152 HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARG 211
H N+VKL+ + + + L +E + + L+ ++ L L +G
Sbjct: 64 HPNIVKLLDVIHTEN--KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQG 118
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYV 271
LA+ H V+HRD K N+L+ K+ADFGLA+ Y V T Y
Sbjct: 119 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 173
Query: 272 APEYAM-TGHLLVKSDVYSYGVVLLELLTGR 301
APE + + D++S G + E++T R
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 14/211 (6%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLS-DGTAVAIK--RLTCGGQQGDKEFLVEVEMLSRLH 151
+ NF+ +GEG +G V+K G VA+K RL + + E+ +L L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 152 HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARG 211
H N+VKL+ + + + L +E + + L+ ++ L L +G
Sbjct: 64 HPNIVKLLDVIHTEN--KLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQL--LQG 118
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYV 271
LA+ H V+HRD K N+L+ K+ADFGLA+ Y V T Y
Sbjct: 119 LAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 173
Query: 272 APEYAM-TGHLLVKSDVYSYGVVLLELLTGR 301
APE + + D++S G + E++T R
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 14/211 (6%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLS-DGTAVAIK--RLTCGGQQGDKEFLVEVEMLSRLH 151
+ NF+ +GEG +G V+K G VA+K RL + + E+ +L L+
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 152 HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARG 211
H N+VKL+ + + + L +E + + L+ ++ L L +G
Sbjct: 65 HPNIVKLLDVIHTEN--KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQG 119
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYV 271
LA+ H V+HRD K N+L+ K+ADFGLA+ Y V T Y
Sbjct: 120 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 174
Query: 272 APEYAM-TGHLLVKSDVYSYGVVLLELLTGR 301
APE + + D++S G + E++T R
Sbjct: 175 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 14/211 (6%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLS-DGTAVAIK--RLTCGGQQGDKEFLVEVEMLSRLH 151
+ NF+ +GEG +G V+K G VA+K RL + + E+ +L L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 152 HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARG 211
H N+VKL+ + + + L +E + + L+ ++ L L +G
Sbjct: 64 HPNIVKLLDVIHTEN--KLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQL--LQG 118
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYV 271
LA+ H V+HRD K N+L+ K+ADFGLA+ Y V T Y
Sbjct: 119 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 173
Query: 272 APEYAM-TGHLLVKSDVYSYGVVLLELLTGR 301
APE + + D++S G + E++T R
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 14/211 (6%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLS-DGTAVAIK--RLTCGGQQGDKEFLVEVEMLSRLH 151
+ NF+ +GEG +G V+K G VA+K RL + + E+ +L L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 152 HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARG 211
H N+VKL+ + + + L +E + + L+ ++ L L +G
Sbjct: 61 HPNIVKLLDVIHTEN--KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQG 115
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYV 271
LA+ H V+HRD K N+L+ K+ADFGLA+ Y V T Y
Sbjct: 116 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 170
Query: 272 APEYAM-TGHLLVKSDVYSYGVVLLELLTGR 301
APE + + D++S G + E++T R
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 14/211 (6%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLS-DGTAVAIK--RLTCGGQQGDKEFLVEVEMLSRLH 151
+ NF+ +GEG +G V+K G VA+K RL + + E+ +L L+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 152 HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARG 211
H N+VKL+ + + + L +E + + L+ ++ L L +G
Sbjct: 62 HPNIVKLLDVIHTEN--KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQG 116
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYV 271
LA+ H V+HRD K N+L+ K+ADFGLA+ Y V T Y
Sbjct: 117 LAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 171
Query: 272 APEYAM-TGHLLVKSDVYSYGVVLLELLTGR 301
APE + + D++S G + E++T R
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 93/208 (44%), Gaps = 14/208 (6%)
Query: 98 NFEPASILGEGGFGRVFKGVLS-DGTAVAIK--RLTCGGQQGDKEFLVEVEMLSRLHHRN 154
NF+ +GEG +G V+K G VA+K RL + + E+ +L L+H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 155 LVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAY 214
+VKL+ + + + L +E + + L+ ++ L L +GLA+
Sbjct: 63 IVKLLDVIHTEN--KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAF 117
Query: 215 LHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPE 274
H V+HRD K N+L+ K+ADFGLA+ Y V T Y APE
Sbjct: 118 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPE 172
Query: 275 YAM-TGHLLVKSDVYSYGVVLLELLTGR 301
+ + D++S G + E++T R
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 100/214 (46%), Gaps = 22/214 (10%)
Query: 96 TNNFEPASILGEGGFGRVFKGVLSDGTA--VAIKRLTCGGQQGDKEFL-VEVEMLSRLHH 152
++ FE S LG G V++ GT A+K L + DK+ + E+ +L RL H
Sbjct: 52 SDFFEVESELGRGATSIVYR-CKQKGTQKPYALKVLK---KTVDKKIVRTEIGVLLRLSH 107
Query: 153 RNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGL 212
N++KL + + ++ L ELV G L + G D +K L+A +
Sbjct: 108 PNIIKLKEIFET--PTEISLVLELVTGGELFDRIVEK-GYYSERDAADAVKQILEA---V 161
Query: 213 AYLHEDSQPCVIHRDFKASNILLEN---NFHAKVADFGLAKQAPEGRTNYLSTRVMGTFG 269
AYLHE+ ++HRD K N+L + K+ADFGL+K L V GT G
Sbjct: 162 AYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH---QVLMKTVCGTPG 215
Query: 270 YVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
Y APE + D++S G++ LL G +P
Sbjct: 216 YCAPEILRGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 15/210 (7%)
Query: 99 FEPASILGEGGFGRVFKGVLSDG-TAVAIKR--LTCGGQQGDKEFLVEVEMLSRLHHRNL 155
+E +GEG +G VFK + VA+KR L + L E+ +L L H+N+
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 156 VKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYL 215
V+L S + L +E + L+ + N LD E +GL +
Sbjct: 64 VRLHDVLHS--DKKLTLVFEFC-DQDLKKYFDS---CNGDLDPEIVKSFLFQLLKGLGFC 117
Query: 216 HEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEY 275
H + V+HRD K N+L+ N K+A+FGLA+ Y + V T Y P+
Sbjct: 118 HSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV--TLWYRPPDV 172
Query: 276 AMTGHLLVKS-DVYSYGVVLLELLTGRKPV 304
L S D++S G + EL +P+
Sbjct: 173 LFGAKLYSTSIDMWSAGCIFAELANAGRPL 202
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
L YLHE +I+RD K N+LL++ H K+ D+G+ K+ R ++ GT Y
Sbjct: 165 ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL--RPGDTTSTFCGTPNY 219
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDM 306
+APE D ++ GV++ E++ GR P D+
Sbjct: 220 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 255
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 14/211 (6%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLS-DGTAVAIK--RLTCGGQQGDKEFLVEVEMLSRLH 151
+ NF+ +GEG +G V+K G VA+K RL + + E+ +L L+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 152 HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARG 211
H N+VKL+ + + + L +E + + L+ ++ L L +G
Sbjct: 62 HPNIVKLLDVIHTEN--KLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQL--LQG 116
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYV 271
LA+ H V+HRD K N+L+ K+ADFGLA+ Y V T Y
Sbjct: 117 LAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 171
Query: 272 APEYAM-TGHLLVKSDVYSYGVVLLELLTGR 301
APE + + D++S G + E++T R
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
L YLHE +I+RD K N+LL++ H K+ D+G+ K+ R ++ GT Y
Sbjct: 133 ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL--RPGDTTSXFCGTPNY 187
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDM 306
+APE D ++ GV++ E++ GR P D+
Sbjct: 188 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 223
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 30/212 (14%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSR--LHHRNLVKLVG-- 160
+G+G +G V+ G G VA+K + + E E+ + H N++ +
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVFFTTEEAS---WFRETEIYQTVLMRHENILGFIAAD 100
Query: 161 YYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHED-- 218
+ +Q L + NGSL +L + LD ++ +K+A + GL +LH +
Sbjct: 101 IKGTGSWTQLYLITDYHENGSLYDYLK-----STTLDAKSMLKLAYSSVSGLCHLHTEIF 155
Query: 219 ---SQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYL----STRVMGTFGYV 271
+P + HRD K+ NIL++ N +AD GLA + TN + +TRV GT Y+
Sbjct: 156 STQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISD-TNEVDIPPNTRV-GTKRYM 213
Query: 272 APEY----AMTGHL--LVKSDVYSYGVVLLEL 297
PE H + +D+YS+G++L E+
Sbjct: 214 PPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 14/211 (6%)
Query: 95 ATNNFEPASILGEGGFGRVFKGVLS-DGTAVAIK--RLTCGGQQGDKEFLVEVEMLSRLH 151
+ NF+ +GEG +G V+K G VA+K RL + + E+ +L L+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 152 HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARG 211
H N+VKL+ + + + L +E + + L+ ++ L L +G
Sbjct: 63 HPNIVKLLDVIHTEN--KLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQL--LQG 117
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYV 271
LA+ H V+HRD K N+L+ K+ADFGLA+ Y V T Y
Sbjct: 118 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 172
Query: 272 APEYAM-TGHLLVKSDVYSYGVVLLELLTGR 301
APE + + D++S G + E++T R
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 93/208 (44%), Gaps = 14/208 (6%)
Query: 98 NFEPASILGEGGFGRVFKGVLS-DGTAVAIK--RLTCGGQQGDKEFLVEVEMLSRLHHRN 154
NF+ +GEG +G V+K G VA+K RL + + E+ +L L+H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 155 LVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAY 214
+VKL+ + + + L +E + + L+ ++ L L +GLA+
Sbjct: 65 IVKLLDVIHTEN--KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAF 119
Query: 215 LHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPE 274
H V+HRD K N+L+ K+ADFGLA+ Y V T Y APE
Sbjct: 120 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPE 174
Query: 275 YAM-TGHLLVKSDVYSYGVVLLELLTGR 301
+ + D++S G + E++T R
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 77/177 (43%), Gaps = 20/177 (11%)
Query: 199 ETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTN 258
E + + ARG+ +L S+ C IHRD A NILL N K+ DFGLA+ +
Sbjct: 199 EDLISYSFQVARGMEFLS--SRKC-IHRDLAARNILLSENNVVKICDFGLARDIYKNPDY 255
Query: 259 YLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVT 317
++APE KSDV+SYGV+L E+ + G P P Q +
Sbjct: 256 VRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPY----PGVQMDEDF 311
Query: 318 WARPILRDKDRLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSL 374
+R LR+ R+ + P+ + I C + +RP E+V+ L
Sbjct: 312 CSR--LREGMRM----------RAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKL 356
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 98 NFEPASILGEGGFGRVFKGVLS-DGTAVAIK--RLTCGGQQGDKEFLVEVEMLSRLHHRN 154
NF+ +GEG +G V+K G VA+K RL + + E+ +L L+H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 155 LVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAY 214
+VKL+ + + + L +E + + L+ ++ L L +GL++
Sbjct: 64 IVKLLDVIHTEN--KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLSF 118
Query: 215 LHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPE 274
H V+HRD K N+L+ K+ADFGLA+ Y T + T Y APE
Sbjct: 119 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPE 173
Query: 275 YAM-TGHLLVKSDVYSYGVVLLELLTGR 301
+ + D++S G + E++T R
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
L YLHE +I+RD K N+LL++ H K+ D+G+ K+ R ++ GT Y
Sbjct: 122 ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL--RPGDTTSXFCGTPNY 176
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDM 306
+APE D ++ GV++ E++ GR P D+
Sbjct: 177 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 212
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
L YLHE +I+RD K N+LL++ H K+ D+G+ K+ R ++ GT Y
Sbjct: 118 ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL--RPGDTTSXFCGTPNY 172
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDM 306
+APE D ++ GV++ E++ GR P D+
Sbjct: 173 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 208
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 98/221 (44%), Gaps = 27/221 (12%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLT--CGGQQGDKEFLVEVEMLSRLHHRN 154
N +P +G + VL VAIK+L+ Q K E+ ++ ++H+N
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKN 84
Query: 155 LVKLVGYYSSRDSSQHL----LCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
++ L+ ++ + + + L EL+ + + LD E +
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLXQV-------IQMELDHERMSYLLYQMLX 137
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
G+ +LH +IHRD K SNI+++++ K+ DFGLA+ A T+++ T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLE------LLTGRKPVD 305
APE + D++S G ++ E L GR +D
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 14/208 (6%)
Query: 98 NFEPASILGEGGFGRVFKG---VLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRN 154
NF+ +GEG +G V+K + + A+ RL + + E+ +L L+H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 155 LVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAY 214
+VKL+ + + + L +E + + L+ ++ L L +GLA+
Sbjct: 64 IVKLLDVIHTEN--KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAF 118
Query: 215 LHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPE 274
H V+HRD K N+L+ K+ADFGLA+ Y T + T Y APE
Sbjct: 119 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPE 173
Query: 275 YAM-TGHLLVKSDVYSYGVVLLELLTGR 301
+ + D++S G + E++T R
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 14/208 (6%)
Query: 98 NFEPASILGEGGFGRVFKG---VLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRN 154
NF+ +GEG +G V+K + + A+ RL + + E+ +L L+H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 155 LVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAY 214
+VKL+ + + + L +E + + L+ ++ L L +GLA+
Sbjct: 63 IVKLLDVIHTEN--KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAF 117
Query: 215 LHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPE 274
H V+HRD K N+L+ K+ADFGLA+ Y T + T Y APE
Sbjct: 118 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPE 172
Query: 275 YAM-TGHLLVKSDVYSYGVVLLELLTGR 301
+ + D++S G + E++T R
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 104/226 (46%), Gaps = 29/226 (12%)
Query: 89 YEELKEATNNFEPASILGEGGFGRVFKGVLSDGT----AVAIK---RLTCGGQQGDKEFL 141
+++ ++ + ++ +LG G F V +L++ VAIK + G++G E
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKKALEGKEGSME-- 64
Query: 142 VEVEMLSRLHHRNLVKLVGYYSSRDSSQHL-LCYELVPNGSLESWLHGPLGVNCHLDWET 200
E+ +L ++ H N+V L Y +S HL L +LV G L + G D
Sbjct: 65 NEIAVLHKIKHPNIVALDDIY---ESGGHLYLIMQLVSGGELFDRIVEK-GFYTERDASR 120
Query: 201 RMKIALDAARGLAYLHEDSQPCVIHRDFKASNIL---LENNFHAKVADFGLAKQAPEGRT 257
+ LDA + YLH+ ++HRD K N+L L+ + ++DFGL+K G
Sbjct: 121 LIFQVLDAVK---YLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV 174
Query: 258 NYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
LST GT GYVAPE D +S GV+ LL G P
Sbjct: 175 --LST-ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 104/226 (46%), Gaps = 29/226 (12%)
Query: 89 YEELKEATNNFEPASILGEGGFGRVFKGVLSDGT----AVAIK---RLTCGGQQGDKEFL 141
+++ ++ + ++ +LG G F V +L++ VAIK + G++G E
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSME-- 64
Query: 142 VEVEMLSRLHHRNLVKLVGYYSSRDSSQHL-LCYELVPNGSLESWLHGPLGVNCHLDWET 200
E+ +L ++ H N+V L Y +S HL L +LV G L + G D
Sbjct: 65 NEIAVLHKIKHPNIVALDDIY---ESGGHLYLIMQLVSGGELFDRIVEK-GFYTERDASR 120
Query: 201 RMKIALDAARGLAYLHEDSQPCVIHRDFKASNIL---LENNFHAKVADFGLAKQAPEGRT 257
+ LDA + YLH+ ++HRD K N+L L+ + ++DFGL+K G
Sbjct: 121 LIFQVLDAVK---YLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV 174
Query: 258 NYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
LST GT GYVAPE D +S GV+ LL G P
Sbjct: 175 --LST-ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 104/226 (46%), Gaps = 29/226 (12%)
Query: 89 YEELKEATNNFEPASILGEGGFGRVFKGVLSDGT----AVAIK---RLTCGGQQGDKEFL 141
+++ ++ + ++ +LG G F V +L++ VAIK + G++G E
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSME-- 64
Query: 142 VEVEMLSRLHHRNLVKLVGYYSSRDSSQHL-LCYELVPNGSLESWLHGPLGVNCHLDWET 200
E+ +L ++ H N+V L Y +S HL L +LV G L + G D
Sbjct: 65 NEIAVLHKIKHPNIVALDDIY---ESGGHLYLIMQLVSGGELFDRIVEK-GFYTERDASR 120
Query: 201 RMKIALDAARGLAYLHEDSQPCVIHRDFKASNIL---LENNFHAKVADFGLAKQAPEGRT 257
+ LDA + YLH+ ++HRD K N+L L+ + ++DFGL+K G
Sbjct: 121 LIFQVLDAVK---YLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV 174
Query: 258 NYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
LST GT GYVAPE D +S GV+ LL G P
Sbjct: 175 --LST-ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 103/225 (45%), Gaps = 34/225 (15%)
Query: 143 EVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRM 202
E+E+L +L+H ++K+ ++ D+ + + EL+ G L + G N L T
Sbjct: 190 EIEILKKLNHPCIIKIKNFF---DAEDYYIVLELMEGGELFDKVVG----NKRLKEATCK 242
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILL---ENNFHAKVADFGLAKQAPEGRTNY 259
+ YLHE+ +IHRD K N+LL E + K+ DFG +K G T+
Sbjct: 243 LYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSL 297
Query: 260 LSTRVMGTFGYVAPEYAM---TGHLLVKSDVYSYGVVLLELLTGRKPVDMSQ-------- 308
+ T + GT Y+APE + T D +S GV+L L+G P +
Sbjct: 298 MRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQ 356
Query: 309 -PSGQENLV--TWARPILRDKDRLEEL--ADPRLGGKYPKEDFIR 348
SG+ N + WA + D +++L DP+ ++ E+ +R
Sbjct: 357 ITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPK--ARFTTEEALR 399
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 98/210 (46%), Gaps = 21/210 (10%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLT--CGGQQGDKEFLVEVEMLSRLHHRN 154
N +P +G + +L VAIK+L+ Q K E+ ++ ++H+N
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKN 84
Query: 155 LVKLVGYYSSRDSSQHL----LCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
++ L+ ++ + S + + EL+ + +L + LD E +
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQ------VIQMELDHERMSYLLYQMLV 137
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
G+ +LH +IHRD K SNI+++++ K+ DFGLA+ A T+++ T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTG 300
APE + D++S G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 104/226 (46%), Gaps = 29/226 (12%)
Query: 89 YEELKEATNNFEPASILGEGGFGRVFKGVLSDGT----AVAIK---RLTCGGQQGDKEFL 141
+++ ++ + ++ +LG G F V +L++ VAIK + G++G E
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSME-- 64
Query: 142 VEVEMLSRLHHRNLVKLVGYYSSRDSSQHL-LCYELVPNGSLESWLHGPLGVNCHLDWET 200
E+ +L ++ H N+V L Y +S HL L +LV G L + G D
Sbjct: 65 NEIAVLHKIKHPNIVALDDIY---ESGGHLYLIMQLVSGGELFDRIVEK-GFYTERDASR 120
Query: 201 RMKIALDAARGLAYLHEDSQPCVIHRDFKASNIL---LENNFHAKVADFGLAKQAPEGRT 257
+ LDA + YLH+ ++HRD K N+L L+ + ++DFGL+K G
Sbjct: 121 LIFQVLDAVK---YLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV 174
Query: 258 NYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
LST GT GYVAPE D +S GV+ LL G P
Sbjct: 175 --LST-ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 103/225 (45%), Gaps = 34/225 (15%)
Query: 143 EVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRM 202
E+E+L +L+H ++K+ ++ + D + + EL+ G L + G N L T
Sbjct: 204 EIEILKKLNHPCIIKIKNFFDAED---YYIVLELMEGGELFDKVVG----NKRLKEATCK 256
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILL---ENNFHAKVADFGLAKQAPEGRTNY 259
+ YLHE+ +IHRD K N+LL E + K+ DFG +K G T+
Sbjct: 257 LYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSL 311
Query: 260 LSTRVMGTFGYVAPEYAM---TGHLLVKSDVYSYGVVLLELLTGRKPVDMSQ-------- 308
+ T + GT Y+APE + T D +S GV+L L+G P +
Sbjct: 312 MRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQ 370
Query: 309 -PSGQENLV--TWARPILRDKDRLEEL--ADPRLGGKYPKEDFIR 348
SG+ N + WA + D +++L DP+ ++ E+ +R
Sbjct: 371 ITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPK--ARFTTEEALR 413
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 87/212 (41%), Gaps = 16/212 (7%)
Query: 97 NNFEPASILGEGGFGRVF----KGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHH 152
N FE +LG+G FG+V K +K+ + L E +L H
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 207
Query: 153 RNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGL 212
L L + + D LC+ + E + H L + + L
Sbjct: 208 PFLTALKYSFQTHDR----LCFVMEYANGGELFFH--LSRERVFSEDRARFYGAEIVSAL 261
Query: 213 AYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVM-GTFGYV 271
YLH S+ V++RD K N++L+ + H K+ DFGL K EG + + + GT Y+
Sbjct: 262 DYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKTFCGTPEYL 316
Query: 272 APEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
APE D + GVV+ E++ GR P
Sbjct: 317 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 87/212 (41%), Gaps = 16/212 (7%)
Query: 97 NNFEPASILGEGGFGRVF----KGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHH 152
N FE +LG+G FG+V K +K+ + L E +L H
Sbjct: 151 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 210
Query: 153 RNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGL 212
L L + + D LC+ + E + H L + + L
Sbjct: 211 PFLTALKYSFQTHDR----LCFVMEYANGGELFFH--LSRERVFSEDRARFYGAEIVSAL 264
Query: 213 AYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVM-GTFGYV 271
YLH S+ V++RD K N++L+ + H K+ DFGL K EG + + + GT Y+
Sbjct: 265 DYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKTFCGTPEYL 319
Query: 272 APEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
APE D + GVV+ E++ GR P
Sbjct: 320 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 96/210 (45%), Gaps = 21/210 (10%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLT--CGGQQGDKEFLVEVEMLSRLHHRN 154
N +P +G + +L VAIK+L+ Q K E+ ++ ++H+N
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 155 LVKLVGYYSSRDSSQHL----LCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
++ L+ ++ + S + + EL+ + + LD E +
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQV-------IQMELDHERMSYLLYQMLC 137
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
G+ +LH +IHRD K SNI+++++ K+ DFGLA+ A T+++ T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTG 300
APE + D++S G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 101/222 (45%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFLVEVEMLSR-LHHRN 154
+ F+ LG G FGRV + G A+K L DK+ +V+++ + L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + +S +D+S + E V G + S L + + R A
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---IGRFSEPHARF-YAAQ 149
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N+L++ + +V DFG AK+ +GRT L+ GT
Sbjct: 150 IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLA----GT 201
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+APE ++ D ++ GV++ E+ G P QP
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFLVEVEMLSR-LHHRN 154
+ F+ LG G FGRV + G A+K L DK+ +V+++ + L+ +
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 114
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + +S +D+S + E V G + S L + + R A
Sbjct: 115 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---IGRFXEPHARF-YAAQ 170
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N+L++ + +V DFG AK+ +GRT L GT
Sbjct: 171 IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC----GT 222
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+APE ++ D ++ GV++ E+ G P QP
Sbjct: 223 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFLVEVEMLSR-LHHRN 154
+ F+ LG G FGRV + G A+K L DK+ +V+++ + L+ +
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 88
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + +S +D+S + E V G + S L + + R A
Sbjct: 89 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---IGRFXEPHARF-YAAQ 144
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N+L++ + +V DFG AK+ +GRT L GT
Sbjct: 145 IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC----GT 196
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+APE ++ D ++ GV++ E+ G P QP
Sbjct: 197 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 238
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 96/210 (45%), Gaps = 21/210 (10%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLT--CGGQQGDKEFLVEVEMLSRLHHRN 154
N +P +G + +L VAIK+L+ Q K E+ ++ ++H+N
Sbjct: 28 QNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 85
Query: 155 LVKLVGYYSSRDSSQHL----LCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
++ L+ ++ + S + + EL+ + + LD E +
Sbjct: 86 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQV-------IQMELDHERMSYLLYQMLC 138
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
G+ +LH +IHRD K SNI+++++ K+ DFGLA+ A T+++ T + T Y
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 192
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTG 300
APE + D++S G ++ E++ G
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFLVEVEMLSR-LHHRN 154
+ F+ LG G FGRV + G A+K L DK+ +V+++ + L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + +S +D+S + E V G + S L + + R A
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---IGRFXEPHARF-YAAQ 149
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N+L++ + +V DFG AK+ +GRT L GT
Sbjct: 150 IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC----GT 201
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+APE ++ D ++ GV++ E+ G P QP
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFLVEVEMLSR-LHHRN 154
+ F+ LG G FGRV + G A+K L DK+ +V+++ + L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + +S +D+S + E V G + S L + + R A
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---IGRFXEPHARF-YAAQ 149
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N+L++ + +V DFG AK+ +GRT L GT
Sbjct: 150 IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC----GT 201
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+APE ++ D ++ GV++ E+ G P QP
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFLVEVEMLSR-LHHRN 154
+ F+ LG G FGRV + G A+K L DK+ +V+++ + L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + +S +D+S + E V G + S L + + R A
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---IGRFXEPHARF-YAAQ 149
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N+L++ + +V DFG AK+ +GRT L GT
Sbjct: 150 IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC----GT 201
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+APE ++ D ++ GV++ E+ G P QP
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 98/210 (46%), Gaps = 21/210 (10%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLT--CGGQQGDKEFLVEVEMLSRLHHRN 154
N +P +G + +L VAIK+L+ Q K E+ ++ ++H+N
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKN 84
Query: 155 LVKLVGYYSSRDSSQHL----LCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
++ L+ ++ + S + + EL+ + +L + LD E +
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQ------VIQMELDHERMSYLLYQMLC 137
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
G+ +LH +IHRD K SNI+++++ K+ DFGLA+ A T+++ T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTG 300
APE + D++S G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 104 ILGEGGFGRVFKGVLSD-----GTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKL 158
LG+GGF + ++ D V K + Q +K E+ + L + ++V
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK-MSTEIAIHKSLDNPHVVGF 107
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHED 218
G++ D +L E+ SL LH + M+ + +G+ YLH +
Sbjct: 108 HGFFEDDDFVYVVL--EICRRRSLLE-LHKRRKAVTEPEARYFMRQTI---QGVQYLHNN 161
Query: 219 SQPCVIHRDFKASNILLENNFHAKVADFGLAKQAP-EGRTNYLSTRVMGTFGYVAPEYAM 277
VIHRD K N+ L ++ K+ DFGLA + +G + GT Y+APE
Sbjct: 162 R---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK---KXLCGTPNYIAPEVLC 215
Query: 278 TGHLLVKSDVYSYGVVLLELLTGRKPVDMS 307
+ D++S G +L LL G+ P + S
Sbjct: 216 KKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 96/210 (45%), Gaps = 21/210 (10%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLT--CGGQQGDKEFLVEVEMLSRLHHRN 154
N +P +G + +L VAIK+L+ Q K E+ ++ ++H+N
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 155 LVKLVGYYSSRDSSQHL----LCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
++ L+ ++ + S + + EL+ + + LD E +
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQV-------IQMELDHERMSYLLYQMLC 137
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
G+ +LH +IHRD K SNI+++++ K+ DFGLA+ A T+++ T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTG 300
APE + D++S G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 98/221 (44%), Gaps = 27/221 (12%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLT--CGGQQGDKEFLVEVEMLSRLHHRN 154
N +P +G + VL VAIK+L+ Q K E+ ++ ++H+N
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 155 LVKLVGYYSSRDSSQHL----LCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
++ L+ ++ + + + L EL+ + + LD E +
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLXQV-------IQMELDHERMSYLLYQMLX 137
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
G+ +LH +IHRD K SNI+++++ K+ DFGLA+ A T+++ T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLE------LLTGRKPVD 305
APE + D++S G ++ E L GR +D
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 98/221 (44%), Gaps = 27/221 (12%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLT--CGGQQGDKEFLVEVEMLSRLHHRN 154
N +P +G + VL VAIK+L+ Q K E+ ++ ++H+N
Sbjct: 20 QNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 77
Query: 155 LVKLVGYYSSRDSSQHL----LCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
++ L+ ++ + + + L EL+ + + LD E +
Sbjct: 78 IISLLNVFTPQKTLEEFQDVYLVMELMDANLXQV-------IQMELDHERMSYLLYQMLX 130
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
G+ +LH +IHRD K SNI+++++ K+ DFGLA+ A T+++ T + T Y
Sbjct: 131 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVVTRYY 184
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLE------LLTGRKPVD 305
APE + D++S G ++ E L GR +D
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 225
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 107/227 (47%), Gaps = 28/227 (12%)
Query: 94 EATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQGDKE-----FLVEVEML 147
+ + +E + +G+G FG VFK G VA+K++ + +KE L E+++L
Sbjct: 15 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVL---MENEKEGFPITALREIKIL 71
Query: 148 SRLHHRNLVKLVGYYSSRDSSQH------LLCYELVPNGSLESWLHGPLGVNCHLDWETR 201
L H N+V L+ ++ S + L ++ + L L L + +
Sbjct: 72 QLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRV 130
Query: 202 MKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQ---APEGRTN 258
M++ L+ GL Y+H + ++HRD KA+N+L+ + K+ADFGLA+ A + N
Sbjct: 131 MQMLLN---GLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPN 184
Query: 259 YLSTRVMGTFGYVAPEYAMTGHLL-VKSDVYSYGVVLLELLTGRKPV 304
RV+ T Y PE + D++ G ++ E+ T R P+
Sbjct: 185 RYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 229
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFLVEVEMLSR-LHHRN 154
+ F+ LG G FGRV + G A+K L DK+ +V+++ + L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + +S +D+S + E V G + S L + + R A
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---IGRFAEPHARF-YAAQ 149
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N+L++ + +V DFG AK+ +GRT L GT
Sbjct: 150 IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC----GT 201
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+APE ++ D ++ GV++ E+ G P QP
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 104 ILGEGGFGRVFKGVLSD-----GTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKL 158
LG+GGF + ++ D V K + Q +K E+ + L + ++V
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK-MSTEIAIHKSLDNPHVVGF 107
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHED 218
G++ D +L E+ SL LH + M+ + +G+ YLH +
Sbjct: 108 HGFFEDDDFVYVVL--EICRRRSLLE-LHKRRKAVTEPEARYFMRQTI---QGVQYLHNN 161
Query: 219 SQPCVIHRDFKASNILLENNFHAKVADFGLAKQAP-EGRTNYLSTRVMGTFGYVAPEYAM 277
VIHRD K N+ L ++ K+ DFGLA + +G + GT Y+APE
Sbjct: 162 R---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK---KDLCGTPNYIAPEVLC 215
Query: 278 TGHLLVKSDVYSYGVVLLELLTGRKPVDMS 307
+ D++S G +L LL G+ P + S
Sbjct: 216 KKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 96/210 (45%), Gaps = 21/210 (10%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLT--CGGQQGDKEFLVEVEMLSRLHHRN 154
N +P +G + +L VAIK+L+ Q K E+ ++ ++H+N
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 155 LVKLVGYYSSRDSSQHL----LCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
++ L+ ++ + S + + EL+ + + LD E +
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQV-------IQMELDHERMSYLLYQMLC 137
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
G+ +LH +IHRD K SNI+++++ K+ DFGLA+ A T+++ T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPEVVTRYY 191
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTG 300
APE + D++S G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 104 ILGEGGFGRVFKGVLSD-----GTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKL 158
LG+GGF + ++ D V K + Q +K E+ + L + ++V
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK-MSTEIAIHKSLDNPHVVGF 107
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHED 218
G++ D +L E+ SL LH + M+ + +G+ YLH +
Sbjct: 108 HGFFEDDDFVYVVL--EICRRRSLLE-LHKRRKAVTEPEARYFMRQTI---QGVQYLHNN 161
Query: 219 SQPCVIHRDFKASNILLENNFHAKVADFGLAKQAP-EGRTNYLSTRVMGTFGYVAPEYAM 277
VIHRD K N+ L ++ K+ DFGLA + +G + GT Y+APE
Sbjct: 162 R---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK---KTLCGTPNYIAPEVLC 215
Query: 278 TGHLLVKSDVYSYGVVLLELLTGRKPVDMS 307
+ D++S G +L LL G+ P + S
Sbjct: 216 KKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 98/210 (46%), Gaps = 21/210 (10%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLT--CGGQQGDKEFLVEVEMLSRLHHRN 154
N +P +G + +L VAIK+L+ Q K E+ ++ ++H+N
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 155 LVKLVGYYSSRDSSQHL----LCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
++ L+ ++ + S + + EL+ + +L + LD E +
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQ------VIQMELDHERMSYLLYQMLC 137
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
G+ +LH +IHRD K SNI+++++ K+ DFGLA+ A T+++ T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTG 300
APE + D++S G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 104/238 (43%), Gaps = 21/238 (8%)
Query: 77 SLPHPTSTRFLAYEELKEATNNFEPASILGEGGFGRVF--KGVLSDGTAV-----AIKRL 129
++ H T L K NFE +LG G +G+VF + + T +K+
Sbjct: 34 TVKHELRTANLTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKA 93
Query: 130 TCGGQQGDKEFL-VEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHG 188
T + E E ++L + + + Y ++ HL+ + + G L + L
Sbjct: 94 TIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLIL-DYINGGELFTHLSQ 152
Query: 189 PLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGL 248
H E ++ + + L +LH + +I+RD K NILL++N H + DFGL
Sbjct: 153 RERFTEH---EVQIYVG-EIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGL 205
Query: 249 AKQAPEGRTNYLSTRVMGTFGYVAPEYAM---TGHLLVKSDVYSYGVVLLELLTGRKP 303
+K+ T + GT Y+AP+ +GH D +S GV++ ELLTG P
Sbjct: 206 SKEFVADETER-AYDFCGTIEYMAPDIVRGGDSGHDKA-VDWWSLGVLMYELLTGASP 261
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 98/210 (46%), Gaps = 21/210 (10%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLT--CGGQQGDKEFLVEVEMLSRLHHRN 154
N +P +G + +L VAIK+L+ Q K E+ ++ ++H+N
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 155 LVKLVGYYSSRDSSQHL----LCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
++ L+ ++ + S + + EL+ + +L + LD E +
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQ------VIQMELDHERMSYLLYQMLC 137
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
G+ +LH +IHRD K SNI+++++ K+ DFGLA+ A T+++ T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTG 300
APE + D++S G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 107/256 (41%), Gaps = 52/256 (20%)
Query: 98 NFEPASILGEGGFGRVFKGVLSDGTAV----------AIKRLTCGGQQGDKEFLV--EVE 145
+FE ++G G FG V L + V +KR + +++ LV + +
Sbjct: 75 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSK 134
Query: 146 MLSRLHH-----RNLVKLVGYYSSRDSSQHLLCYE-LVPNGSLESWLHGPLGVNCHLDWE 199
++ LH+ NL ++ YY D L +E +P +L
Sbjct: 135 WITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYL------------- 181
Query: 200 TRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNY 259
M IA+D+ L Y +HRD K NIL++ N H ++ADFG + E T
Sbjct: 182 AEMVIAIDSVHQLHY---------VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT-V 231
Query: 260 LSTRVMGTFGYVAPEY--AM---TGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQEN 314
S+ +GT Y++PE AM G + D +S GV + E+L G P E+
Sbjct: 232 QSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPF------YAES 285
Query: 315 LVTWARPILRDKDRLE 330
LV I+ K+R +
Sbjct: 286 LVETYGKIMNHKERFQ 301
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 86/212 (40%), Gaps = 16/212 (7%)
Query: 97 NNFEPASILGEGGFGRVF----KGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHH 152
N FE +LG+G FG+V K +K+ + L E +L H
Sbjct: 10 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 69
Query: 153 RNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGL 212
L L + + D LC+ + E + H L + + L
Sbjct: 70 PFLTALKYSFQTHDR----LCFVMEYANGGELFFH--LSRERVFSEDRARFYGAEIVSAL 123
Query: 213 AYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQA-PEGRTNYLSTRVMGTFGYV 271
YLH S+ V++RD K N++L+ + H K+ DFGL K+ +G T GT Y+
Sbjct: 124 DYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT---MKXFCGTPEYL 178
Query: 272 APEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
APE D + GVV+ E++ GR P
Sbjct: 179 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFLVEVEMLSR-LHHRN 154
+ F+ LG G FGRV + G A+K L DK+ +V+++ + L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + +S +D+S + E V G + S L + + R A
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---IGRFSEPHARF-YAAQ 149
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N+L++ + +V DFG AK+ +GRT L GT
Sbjct: 150 IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC----GT 201
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+APE ++ D ++ GV++ E+ G P QP
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFLVEVEMLSR-LHHRN 154
+ F+ LG G FGRV + G A+K L DK+ +V+++ + L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + +S +D+S + E V G + S L + + R A
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---IGRFSEPHARF-YAAQ 149
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N+L++ + +V DFG AK+ +GRT L GT
Sbjct: 150 IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLX----GT 201
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+APE ++ D ++ GV++ E+ G P QP
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 86/212 (40%), Gaps = 16/212 (7%)
Query: 97 NNFEPASILGEGGFGRVF----KGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHH 152
N FE +LG+G FG+V K +K+ + L E +L H
Sbjct: 9 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 68
Query: 153 RNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGL 212
L L + + D LC+ + E + H L + + L
Sbjct: 69 PFLTALKYSFQTHDR----LCFVMEYANGGELFFH--LSRERVFSEDRARFYGAEIVSAL 122
Query: 213 AYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQA-PEGRTNYLSTRVMGTFGYV 271
YLH S+ V++RD K N++L+ + H K+ DFGL K+ +G T GT Y+
Sbjct: 123 DYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT---MKXFCGTPEYL 177
Query: 272 APEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
APE D + GVV+ E++ GR P
Sbjct: 178 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 86/212 (40%), Gaps = 16/212 (7%)
Query: 97 NNFEPASILGEGGFGRVF----KGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHH 152
N FE +LG+G FG+V K +K+ + L E +L H
Sbjct: 8 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 67
Query: 153 RNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGL 212
L L + + D LC+ + E + H L + + L
Sbjct: 68 PFLTALKYSFQTHDR----LCFVMEYANGGELFFH--LSRERVFSEDRARFYGAEIVSAL 121
Query: 213 AYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQA-PEGRTNYLSTRVMGTFGYV 271
YLH S+ V++RD K N++L+ + H K+ DFGL K+ +G T GT Y+
Sbjct: 122 DYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT---MKXFCGTPEYL 176
Query: 272 APEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
APE D + GVV+ E++ GR P
Sbjct: 177 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 96/204 (47%), Gaps = 22/204 (10%)
Query: 105 LGEGGFGRVFKGV--LSDGTAVAIKRLTCGGQQGDK-EFLVEVEMLSRLHHRNLVKLVGY 161
LGEG + V+KG L+D VA+K + ++G + EV +L L H N+V L
Sbjct: 10 LGEGTYATVYKGKSKLTDN-LVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 162 YSSRDSSQHLLCYELVPNGSLESWLH--GPLGVNCHLDWETRMKIAL-DAARGLAYLHED 218
+ S L +E + + L+ +L G + +N H +K+ L RGLAY H
Sbjct: 69 IHTEKSLT--LVFEYL-DKDLKQYLDDCGNI-INMH-----NVKLFLFQLLRGLAYCHRQ 119
Query: 219 SQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAM- 277
V+HRD K N+L+ K+ADFGLA+ Y + V T Y P+ +
Sbjct: 120 K---VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV--TLWYRPPDILLG 174
Query: 278 TGHLLVKSDVYSYGVVLLELLTGR 301
+ + D++ G + E+ TGR
Sbjct: 175 STDYSTQIDMWGVGCIFYEMATGR 198
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 98/220 (44%), Gaps = 27/220 (12%)
Query: 98 NFEPASILGEGGFGRVFKGVLSDGTAVAIKRLT--CGGQQGDKEFLVEVEMLSRLHHRNL 155
N +P +G + VL VAIK+L+ Q K E+ ++ ++H+N+
Sbjct: 28 NLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNI 85
Query: 156 VKLVGYYSSRDSSQHL----LCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARG 211
+ L+ ++ + + + L EL+ + + LD E + G
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLXQV-------IQMELDHERMSYLLYQMLCG 138
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYV 271
+ +LH +IHRD K SNI+++++ K+ DFGLA+ A T+++ T + T Y
Sbjct: 139 IKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAG---TSFMMTPYVVTRYYR 192
Query: 272 APEYAMTGHLLVKSDVYSYGVVLLE------LLTGRKPVD 305
APE + D++S G ++ E L GR +D
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFLVEVEMLSR-LHHRN 154
+ F+ LG G FGRV + G A+K L DK+ +V+++ + L+ +
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 94
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + +S +D+S + E V G + S L + + R A
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---IGRFSEPHARF-YAAQ 150
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N+L++ + +V DFG AK+ +GRT L GT
Sbjct: 151 IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC----GT 202
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+APE ++ D ++ GV++ E+ G P QP
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFLVEVEMLSR-LHHRN 154
+ F+ LG G FGRV + G A+K L DK+ +V+++ + L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + +S +D+S + E V G + S L + + R A
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---IGRFSEPHARF-YAAQ 149
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N+L++ + +V DFG AK+ +GRT L GT
Sbjct: 150 IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC----GT 201
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+APE ++ D ++ GV++ E+ G P QP
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFLVEVEMLSR-LHHRN 154
+ F+ LG G FGRV + G A+K L DK+ +V+++ + L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + +S +D+S + E V G + S L + + R A
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---IGRFSEPHARF-YAAQ 149
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N+L++ + +V DFG AK+ +GRT L GT
Sbjct: 150 IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC----GT 201
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+APE ++ D ++ GV++ E+ G P QP
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFLVEVEMLSR-LHHRN 154
+ F+ LG G FGRV + G A+K L DK+ +V+++ + L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + +S +D+S + E V G + S L + + R A
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---IGRFSEPHARF-YAAQ 149
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N+L++ + +V DFG AK+ +GRT L GT
Sbjct: 150 IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC----GT 201
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+APE ++ D ++ GV++ E+ G P QP
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 7/102 (6%)
Query: 205 ALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRV 264
A + A GL +L +I+RD K N++L++ H K+ADFG+ K E + ++T+
Sbjct: 448 AAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKX 501
Query: 265 M-GTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 305
GT Y+APE D +++GV+L E+L G+ P +
Sbjct: 502 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 543
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Query: 210 RGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAP-EGRTNYLSTRVMGTF 268
+G+ YLH + VIHRD K N+ L ++ K+ DFGLA + +G + GT
Sbjct: 137 QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK---KDLCGTP 190
Query: 269 GYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMS 307
Y+APE + D++S G +L LL G+ P + S
Sbjct: 191 NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 229
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 107/227 (47%), Gaps = 28/227 (12%)
Query: 94 EATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQGDKE-----FLVEVEML 147
+ + +E + +G+G FG VFK G VA+K++ + +KE L E+++L
Sbjct: 15 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVL---MENEKEGFPITALREIKIL 71
Query: 148 SRLHHRNLVKLVGYYSSRDSSQH------LLCYELVPNGSLESWLHGPLGVNCHLDWETR 201
L H N+V L+ ++ S + L ++ + L L L + +
Sbjct: 72 QLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRV 130
Query: 202 MKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQ---APEGRTN 258
M++ L+ GL Y+H + ++HRD KA+N+L+ + K+ADFGLA+ A + N
Sbjct: 131 MQMLLN---GLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPN 184
Query: 259 YLSTRVMGTFGYVAPEYAMTGHLL-VKSDVYSYGVVLLELLTGRKPV 304
RV+ T Y PE + D++ G ++ E+ T R P+
Sbjct: 185 RYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 229
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 98/220 (44%), Gaps = 27/220 (12%)
Query: 98 NFEPASILGEGGFGRVFKGVLSDGTAVAIKRLT--CGGQQGDKEFLVEVEMLSRLHHRNL 155
N +P +G + VL VAIK+L+ Q K E+ ++ ++H+N+
Sbjct: 28 NLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNI 85
Query: 156 VKLVGYYSSRDSSQHL----LCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARG 211
+ L+ ++ + + + L EL+ + + LD E + G
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQV-------IQMELDHERMSYLLYQMLCG 138
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYV 271
+ +LH +IHRD K SNI+++++ K+ DFGLA+ A T+++ T + T Y
Sbjct: 139 IKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAG---TSFMMTPYVVTRYYR 192
Query: 272 APEYAMTGHLLVKSDVYSYGVVLLE------LLTGRKPVD 305
APE + D++S G ++ E L GR +D
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 98/220 (44%), Gaps = 27/220 (12%)
Query: 98 NFEPASILGEGGFGRVFKGVLSDGTAVAIKRLT--CGGQQGDKEFLVEVEMLSRLHHRNL 155
N +P +G + VL VAIK+L+ Q K E+ ++ ++H+N+
Sbjct: 66 NLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 123
Query: 156 VKLVGYYSSRDSSQHL----LCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARG 211
+ L+ ++ + + + L EL+ + + LD E + G
Sbjct: 124 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQV-------IQMELDHERMSYLLYQMLCG 176
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYV 271
+ +LH +IHRD K SNI+++++ K+ DFGLA+ A T+++ T + T Y
Sbjct: 177 IKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYR 230
Query: 272 APEYAMTGHLLVKSDVYSYGVVLLE------LLTGRKPVD 305
APE + D++S G ++ E L GR +D
Sbjct: 231 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 270
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 107/227 (47%), Gaps = 28/227 (12%)
Query: 94 EATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQGDKE-----FLVEVEML 147
+ + +E + +G+G FG VFK G VA+K++ + +KE L E+++L
Sbjct: 15 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVL---MENEKEGFPITALREIKIL 71
Query: 148 SRLHHRNLVKLVGYYSSRDSSQH------LLCYELVPNGSLESWLHGPLGVNCHLDWETR 201
L H N+V L+ ++ S + L ++ + L L L + +
Sbjct: 72 QLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRV 130
Query: 202 MKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQ---APEGRTN 258
M++ L+ GL Y+H + ++HRD KA+N+L+ + K+ADFGLA+ A + N
Sbjct: 131 MQMLLN---GLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPN 184
Query: 259 YLSTRVMGTFGYVAPEYAMTGHLL-VKSDVYSYGVVLLELLTGRKPV 304
RV+ T Y PE + D++ G ++ E+ T R P+
Sbjct: 185 RYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 229
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 107/227 (47%), Gaps = 28/227 (12%)
Query: 94 EATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQGDKE-----FLVEVEML 147
+ + +E + +G+G FG VFK G VA+K++ + +KE L E+++L
Sbjct: 14 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVL---MENEKEGFPITALREIKIL 70
Query: 148 SRLHHRNLVKLVGYYSSRDSSQH------LLCYELVPNGSLESWLHGPLGVNCHLDWETR 201
L H N+V L+ ++ S + L ++ + L L L + +
Sbjct: 71 QLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRV 129
Query: 202 MKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQ---APEGRTN 258
M++ L+ GL Y+H + ++HRD KA+N+L+ + K+ADFGLA+ A + N
Sbjct: 130 MQMLLN---GLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPN 183
Query: 259 YLSTRVMGTFGYVAPEYAMTGHLL-VKSDVYSYGVVLLELLTGRKPV 304
RV+ T Y PE + D++ G ++ E+ T R P+
Sbjct: 184 RYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 228
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 93/223 (41%), Gaps = 36/223 (16%)
Query: 102 ASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLH-HRNLVKLV 159
+ +LGEG + +V V L +G A+K + EVE L + ++N+++L+
Sbjct: 18 SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELI 77
Query: 160 GYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDS 219
++ D ++ L +E + GS+ + + H + ++ D A L +LH
Sbjct: 78 EFF--EDDTRFYLVFEKLQGGSILAHIQK----QKHFNEREASRVVRDVAAALDFLHTKG 131
Query: 220 QPCVIHRDFKASNILLENNFH---AKVADFGLAK----------------QAPEGRTNYL 260
+ HRD K NIL E+ K+ DF L P G Y+
Sbjct: 132 ---IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYM 188
Query: 261 STRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
+ V+ F A Y + D++S GVVL +L+G P
Sbjct: 189 APEVVEVFTDQATFYDK------RCDLWSLGVVLYIMLSGYPP 225
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFLVEVEMLSR-LHHRN 154
+ F+ LG G FGRV + G A+K L DK+ +V+++ + L+ +
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 80
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + +S +D+S + E V G + S L + + R A
Sbjct: 81 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---IGRFSEPHARF-YAAQ 136
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N+L++ + +V DFG AK+ +GRT L GT
Sbjct: 137 IVLTFEYLHSLD---LIYRDLKPENLLIDEQGYIQVTDFGFAKRV-KGRTWXLC----GT 188
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+APE ++ D ++ GV++ E+ G P QP
Sbjct: 189 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 230
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 98/221 (44%), Gaps = 27/221 (12%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLT--CGGQQGDKEFLVEVEMLSRLHHRN 154
N +P +G + VL VAIK+L+ Q K E+ ++ ++H+N
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 155 LVKLVGYYSSRDSSQHL----LCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
++ L+ ++ + + + L EL+ + + LD E +
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQV-------IQMELDHERMSYLLYQMLC 137
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
G+ +LH +IHRD K SNI+++++ K+ DFGLA+ A T+++ T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLE------LLTGRKPVD 305
APE + D++S G ++ E L GR +D
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 92/211 (43%), Gaps = 31/211 (14%)
Query: 104 ILGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFL-VEVEMLSRLHHRNLVKLVG-Y 161
++G G FG VF+ L + VAIK++ DK F E++++ + H N+V L +
Sbjct: 47 VIGNGSFGVVFQAKLVESDEVAIKKVL-----QDKRFKNRELQIMRIVKHPNVVDLKAFF 101
Query: 162 YSSRDSSQHL---LCYELVPNGSLESWLHGPLGVNCHLDWETRMKIAL------DAARGL 212
YS+ D + L E VP + H + + M + L R L
Sbjct: 102 YSNGDKKDEVFLNLVLEYVPETVYRASRH-------YAKLKQTMPMLLIKLYMYQLLRSL 154
Query: 213 AYLHEDSQPCVIHRDFKASNILLENNFHA-KVADFGLAKQAPEGRTNYLSTRVMGTFGYV 271
AY+H + HRD K N+LL+ K+ DFG AK G N + + Y
Sbjct: 155 AYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPN---VSXICSRYYR 208
Query: 272 APEYAM-TGHLLVKSDVYSYGVVLLELLTGR 301
APE + D++S G V+ EL+ G+
Sbjct: 209 APELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 95/210 (45%), Gaps = 21/210 (10%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLT--CGGQQGDKEFLVEVEMLSRLHHRN 154
N +P +G + +L VAIK+L+ Q K E+ ++ ++H+N
Sbjct: 29 QNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 86
Query: 155 LVKLVGYYSSRDSSQHL----LCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
++ L+ ++ + S + + EL+ + + LD E +
Sbjct: 87 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQV-------IQMELDHERMSYLLYQMLC 139
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
G+ +LH +IHRD K SNI+++++ K+ DFGLA+ A T+++ + T Y
Sbjct: 140 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMVPFVVTRYY 193
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTG 300
APE + D++S G ++ E++ G
Sbjct: 194 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 98/221 (44%), Gaps = 27/221 (12%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLT--CGGQQGDKEFLVEVEMLSRLHHRN 154
N +P +G + VL VAIK+L+ Q K E+ ++ ++H+N
Sbjct: 28 QNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 85
Query: 155 LVKLVGYYSSRDSSQHL----LCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
++ L+ ++ + + + L EL+ + + LD E +
Sbjct: 86 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQV-------IQMELDHERMSYLLYQMLC 138
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
G+ +LH +IHRD K SNI+++++ K+ DFGLA+ A T+++ T + T Y
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 192
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLE------LLTGRKPVD 305
APE + D++S G ++ E L GR +D
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 233
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 101/218 (46%), Gaps = 23/218 (10%)
Query: 105 LGEGGFGRVFKGVLSDGTAV--AIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYY 162
+G G +G V K + GT + A K++ + F E+E++ L H N+++L Y
Sbjct: 17 IGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRL--YE 73
Query: 163 SSRDSSQHLLCYELVPNGSL-ESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQP 221
+ D++ L EL G L E +H + +I D +AY H+ +
Sbjct: 74 TFEDNTDIYLVMELCTGGELFERVVHKRVFRESDA-----ARIMKDVLSAVAYCHKLN-- 126
Query: 222 CVIHRDFKASNILL---ENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMT 278
V HRD K N L + K+ DFGLA + G+ + T+V GT YV+P+ +
Sbjct: 127 -VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM--MRTKV-GTPYYVSPQ-VLE 181
Query: 279 GHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLV 316
G + D +S GV++ LL G P S P+ E ++
Sbjct: 182 GLYGPECDEWSAGVMMYVLLCGYPP--FSAPTDXEVML 217
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 104/239 (43%), Gaps = 26/239 (10%)
Query: 88 AYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQGDKEFLVEVEM 146
A E ++ + F+ + G+G FG V G S G +VAIK++ + ++E + ++
Sbjct: 14 ADERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQI-MQD 72
Query: 147 LSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETR----- 201
L+ LHH N+V+L Y+ + Y V + LH C ++ R
Sbjct: 73 LAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLH-----RCCRNYYRRQVAPP 127
Query: 202 ---MKIAL-DAARGLAYLHEDSQPCVIHRDFKASNILL-ENNFHAKVADFGLAKQAPEGR 256
+K+ L R + LH S V HRD K N+L+ E + K+ DFG AK+
Sbjct: 128 PILIKVFLFQLIRSIGCLHLPSV-NVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSE 186
Query: 257 TN--YLSTRVMGTFGYVAPEYAM-TGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQ 312
N Y+ +R Y APE H D++S G + E++ G +GQ
Sbjct: 187 PNVAYICSRY-----YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQ 240
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 98/221 (44%), Gaps = 27/221 (12%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLT--CGGQQGDKEFLVEVEMLSRLHHRN 154
N +P +G + VL VAIK+L+ Q K E+ ++ ++H+N
Sbjct: 21 QNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 78
Query: 155 LVKLVGYYSSRDSSQHL----LCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
++ L+ ++ + + + L EL+ + + LD E +
Sbjct: 79 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQV-------IQMELDHERMSYLLYQMLC 131
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
G+ +LH +IHRD K SNI+++++ K+ DFGLA+ A T+++ T + T Y
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 185
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLE------LLTGRKPVD 305
APE + D++S G ++ E L GR +D
Sbjct: 186 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 226
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 98/221 (44%), Gaps = 27/221 (12%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLT--CGGQQGDKEFLVEVEMLSRLHHRN 154
N +P +G + VL VAIK+L+ Q K E+ ++ ++H+N
Sbjct: 21 QNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 78
Query: 155 LVKLVGYYSSRDSSQHL----LCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
++ L+ ++ + + + L EL+ + + LD E +
Sbjct: 79 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQV-------IQMELDHERMSYLLYQMLC 131
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
G+ +LH +IHRD K SNI+++++ K+ DFGLA+ A T+++ T + T Y
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 185
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLE------LLTGRKPVD 305
APE + D++S G ++ E L GR +D
Sbjct: 186 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 226
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 98/221 (44%), Gaps = 27/221 (12%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLT--CGGQQGDKEFLVEVEMLSRLHHRN 154
N +P +G + VL VAIK+L+ Q K E+ ++ ++H+N
Sbjct: 20 QNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 77
Query: 155 LVKLVGYYSSRDSSQHL----LCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
++ L+ ++ + + + L EL+ + + LD E +
Sbjct: 78 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQV-------IQMELDHERMSYLLYQMLC 130
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
G+ +LH +IHRD K SNI+++++ K+ DFGLA+ A T+++ T + T Y
Sbjct: 131 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 184
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLE------LLTGRKPVD 305
APE + D++S G ++ E L GR +D
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 225
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 98/221 (44%), Gaps = 27/221 (12%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLT--CGGQQGDKEFLVEVEMLSRLHHRN 154
N +P +G + VL VAIK+L+ Q K E+ ++ ++H+N
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 155 LVKLVGYYSSRDSSQHL----LCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
++ L+ ++ + + + L EL+ + + LD E +
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQV-------IQMELDHERMSYLLYQMLC 137
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
G+ +LH +IHRD K SNI+++++ K+ DFGLA+ A T+++ T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLE------LLTGRKPVD 305
APE + D++S G ++ E L GR +D
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 98/220 (44%), Gaps = 27/220 (12%)
Query: 98 NFEPASILGEGGFGRVFKGVLSDGTAVAIKRLT--CGGQQGDKEFLVEVEMLSRLHHRNL 155
N +P +G + VL VAIK+L+ Q K E+ ++ ++H+N+
Sbjct: 66 NLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 123
Query: 156 VKLVGYYSSRDSSQHL----LCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARG 211
+ L+ ++ + + + L EL+ + + LD E + G
Sbjct: 124 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQV-------IQMELDHERMSYLLYQMLCG 176
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYV 271
+ +LH +IHRD K SNI+++++ K+ DFGLA+ A T+++ T + T Y
Sbjct: 177 IKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYR 230
Query: 272 APEYAMTGHLLVKSDVYSYGVVLLE------LLTGRKPVD 305
APE + D++S G ++ E L GR +D
Sbjct: 231 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 270
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 98/221 (44%), Gaps = 27/221 (12%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLT--CGGQQGDKEFLVEVEMLSRLHHRN 154
N +P +G + VL VAIK+L+ Q K E+ ++ ++H+N
Sbjct: 26 QNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 83
Query: 155 LVKLVGYYSSRDSSQHL----LCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
++ L+ ++ + + + L EL+ + + LD E +
Sbjct: 84 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQV-------IQMELDHERMSYLLYQMLC 136
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
G+ +LH +IHRD K SNI+++++ K+ DFGLA+ A T+++ T + T Y
Sbjct: 137 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 190
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLE------LLTGRKPVD 305
APE + D++S G ++ E L GR +D
Sbjct: 191 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 231
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 98/221 (44%), Gaps = 27/221 (12%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLT--CGGQQGDKEFLVEVEMLSRLHHRN 154
N +P +G + VL VAIK+L+ Q K E+ ++ ++H+N
Sbjct: 28 QNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 85
Query: 155 LVKLVGYYSSRDSSQHL----LCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
++ L+ ++ + + + L EL+ + + LD E +
Sbjct: 86 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQV-------IQMELDHERMSYLLYQMLC 138
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
G+ +LH +IHRD K SNI+++++ K+ DFGLA+ A T+++ T + T Y
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 192
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLE------LLTGRKPVD 305
APE + D++S G ++ E L GR +D
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 233
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 101/218 (46%), Gaps = 23/218 (10%)
Query: 105 LGEGGFGRVFKGVLSDGTAV--AIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYY 162
+G G +G V K + GT + A K++ + F E+E++ L H N+++L Y
Sbjct: 34 IGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRL--YE 90
Query: 163 SSRDSSQHLLCYELVPNGSL-ESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQP 221
+ D++ L EL G L E +H + +I D +AY H+ +
Sbjct: 91 TFEDNTDIYLVMELCTGGELFERVVHKRVFRESDA-----ARIMKDVLSAVAYCHKLN-- 143
Query: 222 CVIHRDFKASNILL---ENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMT 278
V HRD K N L + K+ DFGLA + G+ + T+V GT YV+P+ +
Sbjct: 144 -VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM--MRTKV-GTPYYVSPQ-VLE 198
Query: 279 GHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLV 316
G + D +S GV++ LL G P S P+ E ++
Sbjct: 199 GLYGPECDEWSAGVMMYVLLCGYPP--FSAPTDXEVML 234
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 118/273 (43%), Gaps = 39/273 (14%)
Query: 97 NNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCGG---QQGDKEFLVEVE-MLSRLH 151
++F ++G+G FG+V ++ A+K L ++ +K + E +L +
Sbjct: 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK 97
Query: 152 HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARG 211
H LV L + + D +L Y + G L L C L+ R A + A
Sbjct: 98 HPFLVGLHFSFQTADKLYFVLDY--INGGELFYHLQRE---RCFLEPRARF-YAAEIASA 151
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYV 271
L YLH + +++RD K NILL++ H + DFGL K+ E N ++ GT Y+
Sbjct: 152 LGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEH--NSTTSTFCGTPEYL 206
Query: 272 APEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD-----------MSQP-SGQENLVTWA 319
APE D + G VL E+L G P +++P + N+ A
Sbjct: 207 APEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSA 266
Query: 320 RPILR---DKDRLEELADPRLGGKYPKEDFIRV 349
R +L KDR + RLG K+DF+ +
Sbjct: 267 RHLLEGLLQKDRTK-----RLGA---KDDFMEI 291
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 112/282 (39%), Gaps = 41/282 (14%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIK--RLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYY 162
+G GG +VF+ + AIK L Q + E+ L++L + K++ Y
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS-DKIIRLY 122
Query: 163 SSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETR--MKIALDAARGLAYLHEDSQ 220
+ Q++ N L SWL ++ WE + K L+A +H Q
Sbjct: 123 DYEITDQYIYMVMECGNIDLNSWLKKKKSIDP---WERKSYWKNMLEA------VHTIHQ 173
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEY----- 275
++H D K +N L+ + K+ DFG+A Q T+ + +GT Y+ PE
Sbjct: 174 HGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 232
Query: 276 ------AMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRL 329
+ KSDV+S G +L + G+ P + I+ +L
Sbjct: 233 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---------------QQIINQISKL 277
Query: 330 EELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVV 371
+ DP ++P + + C+ + QR ++ E++
Sbjct: 278 HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 7/102 (6%)
Query: 205 ALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRV 264
A + A GL +L +I+RD K N++L++ H K+ADFG+ K E + ++T+
Sbjct: 127 AAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKX 180
Query: 265 M-GTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 305
GT Y+APE D +++GV+L E+L G+ P +
Sbjct: 181 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 222
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 100/222 (45%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFLVEVEMLSR-LHHRN 154
+ F+ LG G FGRV + G A+K L DK+ +V+++ + L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + +S +D+S + E V G + S L + + R A
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---IGRFSEPHARF-YAAQ 149
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N++++ + +V DFG AK+ +GRT L GT
Sbjct: 150 IVLTFEYLHSLD---LIYRDLKPENLIIDQQGYIQVTDFGFAKRV-KGRTWXLC----GT 201
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+APE ++ D ++ GV++ E+ G P QP
Sbjct: 202 PEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 112/282 (39%), Gaps = 41/282 (14%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIK--RLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYY 162
+G GG +VF+ + AIK L Q + E+ L++L + K++ Y
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS-DKIIRLY 75
Query: 163 SSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETR--MKIALDAARGLAYLHEDSQ 220
+ Q++ N L SWL ++ WE + K L+A +H Q
Sbjct: 76 DYEITDQYIYMVMECGNIDLNSWLKKKKSID---PWERKSYWKNMLEA------VHTIHQ 126
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEY----- 275
++H D K +N L+ + K+ DFG+A Q T+ + +GT Y+ PE
Sbjct: 127 HGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 185
Query: 276 ------AMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRL 329
+ KSDV+S G +L + G+ P + I+ +L
Sbjct: 186 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---------------QQIINQISKL 230
Query: 330 EELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVV 371
+ DP ++P + + C+ + QR ++ E++
Sbjct: 231 HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 272
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 100/222 (45%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFLVEVEMLSR-LHHRN 154
+ F+ LG G FGRV + G A+K L DK+ +V+++ + L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + +S +D+S + E V G + S L + + R A
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---IGRFSEPHARF-YAAQ 149
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N+L++ + +V DFG AK+ +GRT L GT
Sbjct: 150 IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC----GT 201
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+APE ++ D ++ GV++ ++ G P QP
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQP 243
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 112/282 (39%), Gaps = 41/282 (14%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIK--RLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYY 162
+G GG +VF+ + AIK L Q + E+ L++L + K++ Y
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS-DKIIRLY 78
Query: 163 SSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETR--MKIALDAARGLAYLHEDSQ 220
+ Q++ N L SWL ++ WE + K L+A +H Q
Sbjct: 79 DYEITDQYIYMVMECGNIDLNSWLKKKKSID---PWERKSYWKNMLEA------VHTIHQ 129
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEY----- 275
++H D K +N L+ + K+ DFG+A Q T+ + +GT Y+ PE
Sbjct: 130 HGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 188
Query: 276 ------AMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRL 329
+ KSDV+S G +L + G+ P + I+ +L
Sbjct: 189 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---------------QQIINQISKL 233
Query: 330 EELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVV 371
+ DP ++P + + C+ + QR ++ E++
Sbjct: 234 HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 275
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 112/282 (39%), Gaps = 41/282 (14%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIK--RLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYY 162
+G GG +VF+ + AIK L Q + E+ L++L + K++ Y
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS-DKIIRLY 94
Query: 163 SSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETR--MKIALDAARGLAYLHEDSQ 220
+ Q++ N L SWL ++ WE + K L+A +H Q
Sbjct: 95 DYEITDQYIYMVMECGNIDLNSWLKKKKSID---PWERKSYWKNMLEA------VHTIHQ 145
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEY----- 275
++H D K +N L+ + K+ DFG+A Q T+ + +GT Y+ PE
Sbjct: 146 HGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 204
Query: 276 ------AMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRL 329
+ KSDV+S G +L + G+ P + I+ +L
Sbjct: 205 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---------------QQIINQISKL 249
Query: 330 EELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVV 371
+ DP ++P + + C+ + QR ++ E++
Sbjct: 250 HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 291
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 112/282 (39%), Gaps = 41/282 (14%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIK--RLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYY 162
+G GG +VF+ + AIK L Q + E+ L++L + K++ Y
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS-DKIIRLY 122
Query: 163 SSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETR--MKIALDAARGLAYLHEDSQ 220
+ Q++ N L SWL ++ WE + K L+A +H Q
Sbjct: 123 DYEITDQYIYMVMECGNIDLNSWLKKKKSID---PWERKSYWKNMLEA------VHTIHQ 173
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEY----- 275
++H D K +N L+ + K+ DFG+A Q T+ + +GT Y+ PE
Sbjct: 174 HGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 232
Query: 276 ------AMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRL 329
+ KSDV+S G +L + G+ P + I+ +L
Sbjct: 233 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---------------QQIINQISKL 277
Query: 330 EELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVV 371
+ DP ++P + + C+ + QR ++ E++
Sbjct: 278 HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 112/282 (39%), Gaps = 41/282 (14%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIK--RLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYY 162
+G GG +VF+ + AIK L Q + E+ L++L + K++ Y
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS-DKIIRLY 74
Query: 163 SSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETR--MKIALDAARGLAYLHEDSQ 220
+ Q++ N L SWL ++ WE + K L+A +H Q
Sbjct: 75 DYEITDQYIYMVMECGNIDLNSWLKKKKSID---PWERKSYWKNMLEA------VHTIHQ 125
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEY----- 275
++H D K +N L+ + K+ DFG+A Q T+ + +GT Y+ PE
Sbjct: 126 HGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 184
Query: 276 ------AMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRL 329
+ KSDV+S G +L + G+ P + I+ +L
Sbjct: 185 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---------------QQIINQISKL 229
Query: 330 EELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVV 371
+ DP ++P + + C+ + QR ++ E++
Sbjct: 230 HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 271
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 95/226 (42%), Gaps = 29/226 (12%)
Query: 91 ELKEATNNFEPASILGEGGFGRV----FKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEM 146
+L+ ++E ++G G FG V K + + + F E ++
Sbjct: 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 122
Query: 147 LSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDW----ETRM 202
++ + +V+L +Y+ +D + E +P G L + + + W +
Sbjct: 123 MAFANSPWVVQL--FYAFQDDRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEV 177
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLA-KQAPEGRTNYLS 261
+ALDA + + IHRD K N+LL+ + H K+ADFG K EG
Sbjct: 178 VLALDAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVR--C 226
Query: 262 TRVMGTFGYVAPEYAMT----GHLLVKSDVYSYGVVLLELLTGRKP 303
+GT Y++PE + G+ + D +S GV L E+L G P
Sbjct: 227 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 100/222 (45%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFLVEVEMLSR-LHHRN 154
+ F+ LG G FGRV + G A+K L DK+ +V+++ + L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + +S +D+S + E V G + S L + + R A
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---IGRFSEPHARF-YAAQ 149
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N+L++ + +V DFG AK+ +GRT L GT
Sbjct: 150 IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC----GT 201
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+APE ++ D ++ GV++ E+ G P +P
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEP 243
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 92/219 (42%), Gaps = 23/219 (10%)
Query: 93 KEATNNFEPASILGEGGFGRVFKGVL----SDGTAVAIKRLTCGGQQGDKEF---LVEVE 145
K N+F+ +LG+G FG+V +L + G A+K L E + E
Sbjct: 4 KVTMNDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 60
Query: 146 MLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIA 205
+L H L L + + D LC+ + E + H L E
Sbjct: 61 VLQNTRHPFLTALKYAFQTHDR----LCFVMEYANGGELFFH--LSRERVFTEERARFYG 114
Query: 206 LDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVM 265
+ L YLH V++RD K N++L+ + H K+ DFGL K EG ++ + +
Sbjct: 115 AEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKTF 168
Query: 266 -GTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
GT Y+APE D + GVV+ E++ GR P
Sbjct: 169 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 92/219 (42%), Gaps = 23/219 (10%)
Query: 93 KEATNNFEPASILGEGGFGRVFKGVL----SDGTAVAIKRLTCGGQQGDKEF---LVEVE 145
K N+F+ +LG+G FG+V +L + G A+K L E + E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 57
Query: 146 MLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIA 205
+L H L L + + D LC+ + E + H L E
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDR----LCFVMEYANGGELFFH--LSRERVFTEERARFYG 111
Query: 206 LDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVM 265
+ L YLH V++RD K N++L+ + H K+ DFGL K EG ++ + +
Sbjct: 112 AEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKTF 165
Query: 266 -GTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
GT Y+APE D + GVV+ E++ GR P
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 95/226 (42%), Gaps = 29/226 (12%)
Query: 91 ELKEATNNFEPASILGEGGFGRV----FKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEM 146
+L+ ++E ++G G FG V K + + + F E ++
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 127
Query: 147 LSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDW----ETRM 202
++ + +V+L +Y+ +D + E +P G L + + + W +
Sbjct: 128 MAFANSPWVVQL--FYAFQDDRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEV 182
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLA-KQAPEGRTNYLS 261
+ALDA + + IHRD K N+LL+ + H K+ADFG K EG
Sbjct: 183 VLALDAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVR--C 231
Query: 262 TRVMGTFGYVAPEYAMT----GHLLVKSDVYSYGVVLLELLTGRKP 303
+GT Y++PE + G+ + D +S GV L E+L G P
Sbjct: 232 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 92/219 (42%), Gaps = 23/219 (10%)
Query: 93 KEATNNFEPASILGEGGFGRVFKGVL----SDGTAVAIKRLTCGGQQGDKEF---LVEVE 145
K N+F+ +LG+G FG+V +L + G A+K L E + E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 57
Query: 146 MLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIA 205
+L H L L + + D LC+ + E + H L E
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDR----LCFVMEYANGGELFFH--LSRERVFTEERARFYG 111
Query: 206 LDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVM 265
+ L YLH V++RD K N++L+ + H K+ DFGL K EG ++ + +
Sbjct: 112 AEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKTF 165
Query: 266 -GTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
GT Y+APE D + GVV+ E++ GR P
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 95/226 (42%), Gaps = 29/226 (12%)
Query: 91 ELKEATNNFEPASILGEGGFGRV----FKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEM 146
+L+ ++E ++G G FG V K + + + F E ++
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 127
Query: 147 LSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDW----ETRM 202
++ + +V+L +Y+ +D + E +P G L + + + W +
Sbjct: 128 MAFANSPWVVQL--FYAFQDDRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEV 182
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGL-AKQAPEGRTNYLS 261
+ALDA + + IHRD K N+LL+ + H K+ADFG K EG
Sbjct: 183 VLALDAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVR--C 231
Query: 262 TRVMGTFGYVAPEYAMT----GHLLVKSDVYSYGVVLLELLTGRKP 303
+GT Y++PE + G+ + D +S GV L E+L G P
Sbjct: 232 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 21/211 (9%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIKRLTC--GGQQGDKEFLVEVEMLSRLHHRNLVKLVGYY 162
L E G ++KG G + +K L + ++F E L H N++ ++G
Sbjct: 18 LNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGAC 76
Query: 163 SSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPC 222
S + L P GSL + LH G N +D +K ALD ARG A+LH +P
Sbjct: 77 QSPPAPHPTLITHWXPYGSLYNVLHE--GTNFVVDQSQAVKFALDXARGXAFLHT-LEPL 133
Query: 223 VIHRDFKASNILLENNFHAKV--ADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGH 280
+ + ++ ++ + A++ AD + Q+P GR Y +VAPE
Sbjct: 134 IPRHALNSRSVXIDEDXTARISXADVKFSFQSP-GRX-YAP-------AWVAPEALQKKP 184
Query: 281 LLVK---SDVYSYGVVLLELLTGRKP-VDMS 307
+D +S+ V+L EL+T P D+S
Sbjct: 185 EDTNRRSADXWSFAVLLWELVTREVPFADLS 215
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 92/219 (42%), Gaps = 23/219 (10%)
Query: 93 KEATNNFEPASILGEGGFGRVFKGVL----SDGTAVAIKRLTCGGQQGDKEF---LVEVE 145
K N+F+ +LG+G FG+V +L + G A+K L E + E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 57
Query: 146 MLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIA 205
+L H L L + + D LC+ + E + H L E
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDR----LCFVMEYANGGELFFH--LSRERVFTEERARFYG 111
Query: 206 LDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVM 265
+ L YLH V++RD K N++L+ + H K+ DFGL K EG ++ + +
Sbjct: 112 AEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXF 165
Query: 266 -GTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
GT Y+APE D + GVV+ E++ GR P
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 92/219 (42%), Gaps = 23/219 (10%)
Query: 93 KEATNNFEPASILGEGGFGRVFKGVL----SDGTAVAIKRLTCGGQQGDKEF---LVEVE 145
K N+F+ +LG+G FG+V +L + G A+K L E + E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 57
Query: 146 MLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIA 205
+L H L L + + D LC+ + E + H L E
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDR----LCFVMEYANGGELFFH--LSRERVFTEERARFYG 111
Query: 206 LDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVM 265
+ L YLH V++RD K N++L+ + H K+ DFGL K EG ++ + +
Sbjct: 112 AEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXF 165
Query: 266 -GTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
GT Y+APE D + GVV+ E++ GR P
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 98/221 (44%), Gaps = 27/221 (12%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLT--CGGQQGDKEFLVEVEMLSRLHHRN 154
N +P +G + +L VAIK+L+ Q K E+ ++ ++H+N
Sbjct: 32 QNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 89
Query: 155 LVKLVGYYSSRDSSQHL----LCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
++ L+ ++ + S + + EL+ + + LD E +
Sbjct: 90 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQV-------IQMELDHERMSYLLYQMLC 142
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
G+ +LH +IHRD K SNI+++++ K+ DFGLA+ A T+++ T + T Y
Sbjct: 143 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 196
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLE------LLTGRKPVD 305
APE + D++S G ++ E L GR +D
Sbjct: 197 RAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYID 237
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 92/219 (42%), Gaps = 23/219 (10%)
Query: 93 KEATNNFEPASILGEGGFGRVFKGVL----SDGTAVAIKRLTCGGQQGDKEF---LVEVE 145
K N+F+ +LG+G FG+V +L + G A+K L E + E
Sbjct: 6 KVTMNDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 62
Query: 146 MLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIA 205
+L H L L + + D LC+ + E + H L E
Sbjct: 63 VLQNTRHPFLTALKYAFQTHDR----LCFVMEYANGGELFFH--LSRERVFTEERARFYG 116
Query: 206 LDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVM 265
+ L YLH V++RD K N++L+ + H K+ DFGL K EG ++ + +
Sbjct: 117 AEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXF 170
Query: 266 -GTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
GT Y+APE D + GVV+ E++ GR P
Sbjct: 171 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 74/165 (44%), Gaps = 16/165 (9%)
Query: 143 EVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRM 202
EV +L + H N++ L Y ++ + +L ELV G L +L L E
Sbjct: 64 EVSILKEIQHPNVITLHEVYENK--TDVILILELVAGGELFDFL----AEKESLTEEEAT 117
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNI-LLENNF---HAKVADFGLAKQAPEGRTN 258
+ G+ YLH + H D K NI LL+ N K+ DFGLA + G
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE- 173
Query: 259 YLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
+ GT +VAPE L +++D++S GV+ LL+G P
Sbjct: 174 --FKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 98/221 (44%), Gaps = 27/221 (12%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLT--CGGQQGDKEFLVEVEMLSRLHHRN 154
N +P +G + +L VAIK+L+ Q K E+ ++ ++H+N
Sbjct: 21 QNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 78
Query: 155 LVKLVGYYSSRDSSQHL----LCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
++ L+ ++ + S + + EL+ + + LD E +
Sbjct: 79 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQV-------IQMELDHERMSYLLYQMLC 131
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
G+ +LH +IHRD K SNI+++++ K+ DFGLA+ A T+++ T + T Y
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 185
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLE------LLTGRKPVD 305
APE + D++S G ++ E L GR +D
Sbjct: 186 RAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYID 226
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 99/222 (44%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFLVEVEMLSR-LHHRN 154
+ F+ LG G FGRV + G A+K L DK+ +V+++ + L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + +S +D+S + E V G + S L + + R A
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---IGRFSEPHARF-YAAQ 149
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N+L++ + +V DFG AK+ +GRT L GT
Sbjct: 150 IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC----GT 201
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+AP ++ D ++ GV++ E+ G P QP
Sbjct: 202 PEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 92/219 (42%), Gaps = 23/219 (10%)
Query: 93 KEATNNFEPASILGEGGFGRVFKGVL----SDGTAVAIKRLTCGGQQGDKEF---LVEVE 145
K N+F+ +LG+G FG+V +L + G A+K L E + E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 57
Query: 146 MLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIA 205
+L H L L + + D LC+ + E + H L E
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDR----LCFVMEYANGGELFFH--LSRERVFTEERARFYG 111
Query: 206 LDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVM 265
+ L YLH V++RD K N++L+ + H K+ DFGL K EG ++ + +
Sbjct: 112 AEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXF 165
Query: 266 -GTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
GT Y+APE D + GVV+ E++ GR P
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 126/287 (43%), Gaps = 49/287 (17%)
Query: 105 LGEGGFGRVFKGVLSD--------GTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLV 156
LG+G F ++FKGV + T V +K L + + F M+S+L H++LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 157 KLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNC-HLDWETRMKIALDAARGLAYL 215
G D +++L E V GSL+++L NC ++ W ++++A A + +L
Sbjct: 76 LNYGVCVCGD--ENILVQEFVKFGSLDTYLKK--NKNCINILW--KLEVAKQLAAAMHFL 129
Query: 216 HEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRT------NYLSTRVMGTFG 269
E++ +IH + A NILL K + K + G + + L R+
Sbjct: 130 EENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERI----P 182
Query: 270 YVAPE-YAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARPILRDKD 327
+V PE +L + +D +S+G L E+ + G KP +S Q L + +D
Sbjct: 183 WVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKP--LSALDSQRKLQFY-------ED 233
Query: 328 RLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSL 374
R +L P+ + + C+ E + RP+ +++ L
Sbjct: 234 R-HQLPAPKAA---------ELANLINNCMDYEPDHRPSFRAIIRDL 270
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 74/165 (44%), Gaps = 16/165 (9%)
Query: 143 EVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRM 202
EV +L + H N++ L Y ++ + +L ELV G L +L L E
Sbjct: 64 EVSILKEIQHPNVITLHEVYENK--TDVILILELVAGGELFDFL----AEKESLTEEEAT 117
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNI-LLENNF---HAKVADFGLAKQAPEGRTN 258
+ G+ YLH + H D K NI LL+ N K+ DFGLA + G
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE- 173
Query: 259 YLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
+ GT +VAPE L +++D++S GV+ LL+G P
Sbjct: 174 --FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 74/165 (44%), Gaps = 16/165 (9%)
Query: 143 EVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRM 202
EV +L + H N++ L Y ++ + +L ELV G L +L L E
Sbjct: 64 EVSILKEIQHPNVITLHEVYENK--TDVILILELVAGGELFDFL----AEKESLTEEEAT 117
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNI-LLENNF---HAKVADFGLAKQAPEGRTN 258
+ G+ YLH + H D K NI LL+ N K+ DFGLA + G
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE- 173
Query: 259 YLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
+ GT +VAPE L +++D++S GV+ LL+G P
Sbjct: 174 --FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 74/165 (44%), Gaps = 16/165 (9%)
Query: 143 EVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRM 202
EV +L + H N++ L Y ++ + +L ELV G L +L L E
Sbjct: 64 EVSILKEIQHPNVITLHEVYENK--TDVILILELVAGGELFDFL----AEKESLTEEEAT 117
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNI-LLENNF---HAKVADFGLAKQAPEGRTN 258
+ G+ YLH + H D K NI LL+ N K+ DFGLA + G
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE- 173
Query: 259 YLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
+ GT +VAPE L +++D++S GV+ LL+G P
Sbjct: 174 --FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 74/165 (44%), Gaps = 16/165 (9%)
Query: 143 EVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRM 202
EV +L + H N++ L Y ++ + +L ELV G L +L L E
Sbjct: 64 EVSILKEIQHPNVITLHEVYENK--TDVILILELVAGGELFDFL----AEKESLTEEEAT 117
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNI-LLENNF---HAKVADFGLAKQAPEGRTN 258
+ G+ YLH + H D K NI LL+ N K+ DFGLA + G
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE- 173
Query: 259 YLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
+ GT +VAPE L +++D++S GV+ LL+G P
Sbjct: 174 --FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 74/165 (44%), Gaps = 16/165 (9%)
Query: 143 EVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRM 202
EV +L + H N++ L Y ++ + +L ELV G L +L L E
Sbjct: 64 EVSILKEIQHPNVITLHEVYENK--TDVILILELVAGGELFDFL----AEKESLTEEEAT 117
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNI-LLENNF---HAKVADFGLAKQAPEGRTN 258
+ G+ YLH + H D K NI LL+ N K+ DFGLA + G
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE- 173
Query: 259 YLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
+ GT +VAPE L +++D++S GV+ LL+G P
Sbjct: 174 --FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 126/287 (43%), Gaps = 49/287 (17%)
Query: 105 LGEGGFGRVFKGVLSD--------GTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLV 156
LG+G F ++FKGV + T V +K L + + F M+S+L H++LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 157 KLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNC-HLDWETRMKIALDAARGLAYL 215
G D +++L E V GSL+++L NC ++ W ++++A A + +L
Sbjct: 76 LNYGVCFCGD--ENILVQEFVKFGSLDTYLKK--NKNCINILW--KLEVAKQLAWAMHFL 129
Query: 216 HEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRT------NYLSTRVMGTFG 269
E++ +IH + A NILL K + K + G + + L R+
Sbjct: 130 EENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERI----P 182
Query: 270 YVAPE-YAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDMSQPSGQENLVTWARPILRDKD 327
+V PE +L + +D +S+G L E+ + G KP +S Q L + +D
Sbjct: 183 WVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKP--LSALDSQRKLQFY-------ED 233
Query: 328 RLEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQSL 374
R +L P+ + + C+ E + RP+ +++ L
Sbjct: 234 R-HQLPAPKAA---------ELANLINNCMDYEPDHRPSFRAIIRDL 270
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 74/165 (44%), Gaps = 16/165 (9%)
Query: 143 EVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRM 202
EV +L + H N++ L Y ++ + +L ELV G L +L L E
Sbjct: 64 EVSILKEIQHPNVITLHEVYENK--TDVILILELVAGGELFDFL----AEKESLTEEEAT 117
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNI-LLENNF---HAKVADFGLAKQAPEGRTN 258
+ G+ YLH + H D K NI LL+ N K+ DFGLA + G
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE- 173
Query: 259 YLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
+ GT +VAPE L +++D++S GV+ LL+G P
Sbjct: 174 --FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 74/165 (44%), Gaps = 16/165 (9%)
Query: 143 EVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRM 202
EV +L + H N++ L Y ++ + +L ELV G L +L L E
Sbjct: 64 EVSILKEIQHPNVITLHEVYENK--TDVILILELVAGGELFDFL----AEKESLTEEEAT 117
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNI-LLENNF---HAKVADFGLAKQAPEGRTN 258
+ G+ YLH + H D K NI LL+ N K+ DFGLA + G
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE- 173
Query: 259 YLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
+ GT +VAPE L +++D++S GV+ LL+G P
Sbjct: 174 --FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 102/223 (45%), Gaps = 25/223 (11%)
Query: 93 KEATNNFEPASILGEGGFGRVFK----GVLSDGTAVAIK-RLTCGGQQG--DKEFLVEVE 145
++ +++E LG G F V K G + A IK R ++G +E EV
Sbjct: 8 EDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVN 67
Query: 146 MLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETR-MKI 204
+L + H N++ L + ++ + +L ELV G L +L + D T+ +K
Sbjct: 68 ILREIRHPNIITLHDIFENK--TDVVLILELVSGGELFDFLAEKESLTE--DEATQFLKQ 123
Query: 205 ALDAARGLAYLHEDSQPCVIHRDFKASNILLEN----NFHAKVADFGLAKQAPEGRTNYL 260
LD G+ YLH + H D K NI+L + N K+ DFG+A + G
Sbjct: 124 ILD---GVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE--- 174
Query: 261 STRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
+ GT +VAPE L +++D++S GV+ LL+G P
Sbjct: 175 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 97/222 (43%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFLVEVEMLSR-LHHRN 154
+ F+ LG G FGRV + G A+K L DK+ +V+++ + L+ +
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 114
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + +S +D+S + E V G + S L + + R A
Sbjct: 115 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---IGRFSEPHARF-YAAQ 170
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N+L++ + +V DFG AK R + + GT
Sbjct: 171 IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGATWTLCGT 222
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
Y+APE ++ D ++ GV++ E+ G P QP
Sbjct: 223 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 74/165 (44%), Gaps = 16/165 (9%)
Query: 143 EVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRM 202
EV +L + H N++ L Y ++ + +L ELV G L +L L E
Sbjct: 64 EVSILKEIQHPNVITLHEVYENK--TDVILILELVAGGELFDFL----AEKESLTEEEAT 117
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNI-LLENNF---HAKVADFGLAKQAPEGRTN 258
+ G+ YLH + H D K NI LL+ N K+ DFGLA + G
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE- 173
Query: 259 YLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
+ GT +VAPE L +++D++S GV+ LL+G P
Sbjct: 174 --FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 74/165 (44%), Gaps = 16/165 (9%)
Query: 143 EVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRM 202
EV +L + H N++ L Y ++ + +L ELV G L +L L E
Sbjct: 63 EVSILKEIQHPNVITLHEVYENK--TDVILILELVAGGELFDFL----AEKESLTEEEAT 116
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNI-LLENNF---HAKVADFGLAKQAPEGRTN 258
+ G+ YLH + H D K NI LL+ N K+ DFGLA + G
Sbjct: 117 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE- 172
Query: 259 YLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
+ GT +VAPE L +++D++S GV+ LL+G P
Sbjct: 173 --FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 74/165 (44%), Gaps = 16/165 (9%)
Query: 143 EVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRM 202
EV +L + H N++ L Y ++ + +L ELV G L +L L E
Sbjct: 63 EVSILKEIQHPNVITLHEVYENK--TDVILILELVAGGELFDFL----AEKESLTEEEAT 116
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNI-LLENNF---HAKVADFGLAKQAPEGRTN 258
+ G+ YLH + H D K NI LL+ N K+ DFGLA + G
Sbjct: 117 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE- 172
Query: 259 YLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
+ GT +VAPE L +++D++S GV+ LL+G P
Sbjct: 173 --FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 74/165 (44%), Gaps = 16/165 (9%)
Query: 143 EVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRM 202
EV +L + H N++ L Y ++ + +L ELV G L +L L E
Sbjct: 64 EVSILKEIQHPNVITLHEVYENK--TDVILILELVAGGELFDFL----AEKESLTEEEAT 117
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNI-LLENNF---HAKVADFGLAKQAPEGRTN 258
+ G+ YLH + H D K NI LL+ N K+ DFGLA + G
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE- 173
Query: 259 YLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
+ GT +VAPE L +++D++S GV+ LL+G P
Sbjct: 174 --FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 102/223 (45%), Gaps = 34/223 (15%)
Query: 99 FEPASILGEGGFGRVFKGVLSD-GTAVAIK-----RLTCGGQQGDKEFLVEVEMLSRLHH 152
+E ++G+G F V + + + G A+K + T ++ E + L H
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 153 RNLVKLVGYYSSRDSSQHL---------LCYELVPNGSLESWLHGPLGVNCHLDWETRMK 203
++V+L+ YSS D ++ LC+E+V ++ V H M+
Sbjct: 86 PHIVELLETYSS-DGMLYMVFEFMDGADLCFEIVKRA--DAGFVYSEAVASHY-----MR 137
Query: 204 IALDAARGLAYLHEDSQPCVIHRDFKASNILL---ENNFHAKVADFGLAKQAPEGRTNYL 260
L+A R Y H+++ +IHRD K N+LL EN+ K+ DFG+A Q G + +
Sbjct: 138 QILEALR---YCHDNN---IIHRDVKPENVLLASKENSAPVKLGDFGVAIQL--GESGLV 189
Query: 261 STRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
+ +GT ++APE DV+ GV+L LL+G P
Sbjct: 190 AGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 100/219 (45%), Gaps = 25/219 (11%)
Query: 97 NNFEPASILGEGGFGRVFK----GVLSDGTAVAIK-RLTCGGQQG--DKEFLVEVEMLSR 149
+++E LG G F V K G + A IK R ++G +E EV +L
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64
Query: 150 LHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETR-MKIALDA 208
+ H N++ L + ++ + +L ELV G L +L + D T+ +K LD
Sbjct: 65 IRHPNIITLHDIFENK--TDVVLILELVSGGELFDFLAEKESLTE--DEATQFLKQILD- 119
Query: 209 ARGLAYLHEDSQPCVIHRDFKASNILLEN----NFHAKVADFGLAKQAPEGRTNYLSTRV 264
G+ YLH + H D K NI+L + N K+ DFG+A + G +
Sbjct: 120 --GVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE---FKNI 171
Query: 265 MGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
GT +VAPE L +++D++S GV+ LL+G P
Sbjct: 172 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 210
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 96/217 (44%), Gaps = 24/217 (11%)
Query: 96 TNNFEPASILGEGGFGRVFK------GVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSR 149
++N++ LG+G F V + G+ + K+L+ Q + E + +
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREARICRK 84
Query: 150 LHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAA 209
L H N+V+L + S ++ S H L ++LV G L + + + + I
Sbjct: 85 LQHPNIVRL--HDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQ-QIL 138
Query: 210 RGLAYLHEDSQPCVIHRDFKASNILLENNFHA---KVADFGLAKQAPEGRTNYLSTRVMG 266
+AY H + ++HR+ K N+LL + K+ADFGLA + + + G
Sbjct: 139 ESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAG 192
Query: 267 TFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
T GY++PE D+++ GV+L LL G P
Sbjct: 193 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 96/217 (44%), Gaps = 24/217 (11%)
Query: 96 TNNFEPASILGEGGFGRVFK------GVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSR 149
++N++ LG+G F V + G+ + K+L+ Q + E + +
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREARICRK 61
Query: 150 LHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAA 209
L H N+V+L + S ++ S H L ++LV G L + + + + I
Sbjct: 62 LQHPNIVRL--HDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQ-QIL 115
Query: 210 RGLAYLHEDSQPCVIHRDFKASNILLENNFH---AKVADFGLAKQAPEGRTNYLSTRVMG 266
+AY H + ++HR+ K N+LL + K+ADFGLA + + + G
Sbjct: 116 ESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAG 169
Query: 267 TFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
T GY++PE D+++ GV+L LL G P
Sbjct: 170 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 96/217 (44%), Gaps = 24/217 (11%)
Query: 96 TNNFEPASILGEGGFGRVFK------GVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSR 149
++N++ LG+G F V + G+ + K+L+ Q + E + +
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREARICRK 61
Query: 150 LHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAA 209
L H N+V+L + S ++ S H L ++LV G L + + + + I
Sbjct: 62 LQHPNIVRL--HDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQ-QIL 115
Query: 210 RGLAYLHEDSQPCVIHRDFKASNILLENNFH---AKVADFGLAKQAPEGRTNYLSTRVMG 266
+AY H + ++HR+ K N+LL + K+ADFGLA + + + G
Sbjct: 116 ESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAG 169
Query: 267 TFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
T GY++PE D+++ GV+L LL G P
Sbjct: 170 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 74/165 (44%), Gaps = 16/165 (9%)
Query: 143 EVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRM 202
EV +L + H N++ L Y ++ + +L ELV G L +L L E
Sbjct: 64 EVSILKEIQHPNVITLHEVYENK--TDVILILELVAGGELFDFL----AEKESLTEEEAT 117
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNI-LLENNF---HAKVADFGLAKQAPEGRTN 258
+ G+ YLH + H D K NI LL+ N K+ DFGLA + G
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE- 173
Query: 259 YLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
+ GT +VAPE L +++D++S GV+ LL+G P
Sbjct: 174 --FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 96/217 (44%), Gaps = 24/217 (11%)
Query: 96 TNNFEPASILGEGGFGRVFK------GVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSR 149
++N++ LG+G F V + G+ + K+L+ Q + E + +
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREARICRK 60
Query: 150 LHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAA 209
L H N+V+L + S ++ S H L ++LV G L + + + + I
Sbjct: 61 LQHPNIVRL--HDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQ-QIL 114
Query: 210 RGLAYLHEDSQPCVIHRDFKASNILLENNFH---AKVADFGLAKQAPEGRTNYLSTRVMG 266
+AY H + ++HR+ K N+LL + K+ADFGLA + + + G
Sbjct: 115 ESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAG 168
Query: 267 TFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
T GY++PE D+++ GV+L LL G P
Sbjct: 169 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 225 HRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGHLLVK 284
HRD K NIL+ + A + DFG+A + + L V GT Y APE H +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTV-GTLYYXAPERFSESHATYR 215
Query: 285 SDVYSYGVVLLELLTGRKPVDMSQ 308
+D+Y+ VL E LTG P Q
Sbjct: 216 ADIYALTCVLYECLTGSPPYQGDQ 239
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 111/282 (39%), Gaps = 41/282 (14%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIK--RLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYY 162
+G GG +VF+ + AIK L Q + E+ L++L + K++ Y
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS-DKIIRLY 122
Query: 163 SSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETR--MKIALDAARGLAYLHEDSQ 220
+ Q++ N L SWL ++ WE + K L+A +H Q
Sbjct: 123 DYEITDQYIYMVMECGNIDLNSWLKKKKSID---PWERKSYWKNMLEA------VHTIHQ 173
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEY----- 275
++H D K +N L+ + K+ DFG+A Q T+ + +G Y+ PE
Sbjct: 174 HGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMS 232
Query: 276 ------AMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRL 329
+ KSDV+S G +L + G+ P + I+ +L
Sbjct: 233 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---------------QQIINQISKL 277
Query: 330 EELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVV 371
+ DP ++P + + C+ + QR ++ E++
Sbjct: 278 HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 99/222 (44%), Gaps = 28/222 (12%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFLVEVEMLSR-LHHRN 154
+ F+ LG G FGRV + G A+K L DK+ +V+++ + L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 155 LVKLVGY-------YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALD 207
+++ V + +S +D+S + E V G + S L + + R A
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---IGRFSEPHARF-YAAQ 149
Query: 208 AARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGT 267
YLH +I+RD K N+L++ + +V DFG AK+ +GRT L GT
Sbjct: 150 IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC----GT 201
Query: 268 FGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQP 309
+APE ++ D ++ GV++ E+ G P QP
Sbjct: 202 PEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 74/165 (44%), Gaps = 16/165 (9%)
Query: 143 EVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRM 202
EV +L + H N++ L Y ++ + +L ELV G L +L L E
Sbjct: 64 EVSILKEIQHPNVITLHEVYENK--TDVILIGELVAGGELFDFL----AEKESLTEEEAT 117
Query: 203 KIALDAARGLAYLHEDSQPCVIHRDFKASNI-LLENNF---HAKVADFGLAKQAPEGRTN 258
+ G+ YLH + H D K NI LL+ N K+ DFGLA + G
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE- 173
Query: 259 YLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
+ GT +VAPE L +++D++S GV+ LL+G P
Sbjct: 174 --FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 126/285 (44%), Gaps = 57/285 (20%)
Query: 104 ILGEGGFGRVFKG-VLSDGTAVAIKRLTCGGQQGDKEF------LVEVEMLSRLH----H 152
+LG+GGFG VF G L+D VAIK + G +EV +L ++ H
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 153 RNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWL--HGPLGVNCHLDWETRMKIALDAAR 210
+++L+ ++ +++ +L L P L ++ GPLG +R A
Sbjct: 98 PGVIRLLDWFETQEGFMLVLERPL-PAQDLFDYITEKGPLGEG-----PSRCFFGQVVA- 150
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLE-NNFHAKVADFGL-AKQAPEGRTNYLSTRVMGTF 268
+ + H V+HRD K NIL++ AK+ DFG A E T++ TRV
Sbjct: 151 AIQHCHSRG---VVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRV---- 203
Query: 269 GYVAPEY-AMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKD 327
Y PE+ + + + + V+S G++L +++ G P + RD++
Sbjct: 204 -YSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFE------------------RDQE 244
Query: 328 RLE-ELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVV 371
LE EL +P C + C+AP+ + RP++ E++
Sbjct: 245 ILEAEL-------HFPAHVSPDCCALIRRCLAPKPSSRPSLEEIL 282
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 110/282 (39%), Gaps = 41/282 (14%)
Query: 105 LGEGGFGRVFKGVLSDGTAVAIK--RLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYY 162
+G GG +VF+ + AIK L Q + E+ L++L + K++ Y
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS-DKIIRLY 94
Query: 163 SSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETR--MKIALDAARGLAYLHEDSQ 220
+ Q++ N L SWL ++ WE + K L+A +H Q
Sbjct: 95 DYEITDQYIYMVMECGNIDLNSWLKKKKSID---PWERKSYWKNMLEA------VHTIHQ 145
Query: 221 PCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEY----- 275
++H D K +N L+ + K+ DFG+A Q + +GT Y+ PE
Sbjct: 146 HGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMS 204
Query: 276 ------AMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRL 329
+ KSDV+S G +L + G+ P + I+ +L
Sbjct: 205 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---------------QQIINQISKL 249
Query: 330 EELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVV 371
+ DP ++P + + C+ + QR ++ E++
Sbjct: 250 HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 291
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 100/219 (45%), Gaps = 25/219 (11%)
Query: 97 NNFEPASILGEGGFGRVFK----GVLSDGTAVAIK-RLTCGGQQG--DKEFLVEVEMLSR 149
+++E LG G F V K G + A IK R ++G +E EV +L
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILRE 85
Query: 150 LHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETR-MKIALDA 208
+ H N++ L + ++ + +L ELV G L +L + D T+ +K LD
Sbjct: 86 IRHPNIITLHDIFENK--TDVVLILELVSGGELFDFLAEKESLTE--DEATQFLKQILD- 140
Query: 209 ARGLAYLHEDSQPCVIHRDFKASNILLEN----NFHAKVADFGLAKQAPEGRTNYLSTRV 264
G+ YLH + H D K NI+L + N K+ DFG+A + G +
Sbjct: 141 --GVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE---FKNI 192
Query: 265 MGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
GT +VAPE L +++D++S GV+ LL+G P
Sbjct: 193 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 91/202 (45%), Gaps = 14/202 (6%)
Query: 105 LGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYS 163
LG G FG V + + G A K + + + E++ +S L H LV L + +
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNL--HDA 222
Query: 164 SRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCV 223
D ++ ++ YE + G L + + + ++ +GL ++HE++
Sbjct: 223 FEDDNEMVMIYEFMSGGEL---FEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN---Y 276
Query: 224 IHRDFKASNILL--ENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGHL 281
+H D K NI+ + + K+ DFGL ++ ++T GT + APE A +
Sbjct: 277 VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPV 333
Query: 282 LVKSDVYSYGVVLLELLTGRKP 303
+D++S GV+ LL+G P
Sbjct: 334 GYYTDMWSVGVLSYILLSGLSP 355
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 90/202 (44%), Gaps = 14/202 (6%)
Query: 105 LGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYS 163
LG G FG V + + G A K + + + E++ +S L H LV L +
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 164 SRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCV 223
D ++ ++ YE + G L + + + ++ +GL ++HE++
Sbjct: 119 --DDNEMVMIYEFMSGGEL---FEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN---Y 170
Query: 224 IHRDFKASNILL--ENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGHL 281
+H D K NI+ + + K+ DFGL ++ ++T GT + APE A +
Sbjct: 171 VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPV 227
Query: 282 LVKSDVYSYGVVLLELLTGRKP 303
+D++S GV+ LL+G P
Sbjct: 228 GYYTDMWSVGVLSYILLSGLSP 249
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 97/221 (43%), Gaps = 27/221 (12%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLT--CGGQQGDKEFLVEVEMLSRLHHRN 154
N +P +G + +L VAIK+L+ Q K E+ ++ ++H+N
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 155 LVKLVGYYSSRDSSQHL----LCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
++ L+ ++ + S + + EL+ + + LD E +
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQV-------IQMELDHERMSYLLYQMLC 137
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
G+ +LH +IHRD K SNI+++++ K+ DFGLA+ A T+++ + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMEPEVVTRYY 191
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLE------LLTGRKPVD 305
APE + D++S G ++ E L GR +D
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYID 232
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 14/104 (13%)
Query: 204 IALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTR 263
+ALDA + +IHRD K N+LL+ + H K+ADFG + E + T
Sbjct: 185 LALDAIHSMG---------LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTA 235
Query: 264 VMGTFGYVAPEYAMT----GHLLVKSDVYSYGVVLLELLTGRKP 303
V GT Y++PE + G+ + D +S GV L E+L G P
Sbjct: 236 V-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 94/223 (42%), Gaps = 35/223 (15%)
Query: 102 ASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFLV-------EVEMLSRLHHR 153
+ ILG+G VF+G G AIK + FL E E+L +L+H+
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFN------NISFLRPVDVQMREFEVLKKLNHK 67
Query: 154 NLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIAL-DAARGL 212
N+VKL + +L E P GSL + L P N + E+ I L D G+
Sbjct: 68 NIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEP--SNAYGLPESEFLIVLRDVVGGM 125
Query: 213 AYLHEDSQPCVIHRDFKASNILL----ENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF 268
+L E+ ++HR+ K NI+ + K+ DFG A++ E ++S + GT
Sbjct: 126 NHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL-EDDEQFVS--LYGTE 179
Query: 269 GYVAPEYAMTGHLL--------VKSDVYSYGVVLLELLTGRKP 303
Y+ P+ L D++S GV TG P
Sbjct: 180 EYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 97/221 (43%), Gaps = 27/221 (12%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLT--CGGQQGDKEFLVEVEMLSRLHHRN 154
N +P +G + +L VAIK+L+ Q K E+ ++ ++H+N
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 155 LVKLVGYYSSRDSSQHL----LCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
++ L+ ++ + S + + EL+ + + LD E +
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQV-------IQMELDHERMSYLLYQMLC 137
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
G+ +LH +IHRD K SNI+++++ K+ DFGLA+ A T+++ + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMEPEVVTRYY 191
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLE------LLTGRKPVD 305
APE + D++S G ++ E L GR +D
Sbjct: 192 RAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYID 232
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 205 ALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRV 264
+ A+G+ +L S+ C IHRD A NILL K+ DFGLA+ +
Sbjct: 204 SFQVAKGMEFLA--SRKC-IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 260
Query: 265 MGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
++APE ++SDV+S+GV+L E+ +
Sbjct: 261 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 205 ALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRV 264
+ A+G+ +L S+ C IHRD A NILL K+ DFGLA+ +
Sbjct: 206 SFQVAKGMEFLA--SRKC-IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 262
Query: 265 MGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
++APE ++SDV+S+GV+L E+ +
Sbjct: 263 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 36/221 (16%)
Query: 104 ILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLH-HRNLVKLVGY 161
+LGEG RV + L A+K + EVEML + HRN+++L+ +
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEF 79
Query: 162 YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQP 221
+ D + L +E + GS+ S +H N + E + + D A L +LH
Sbjct: 80 FEEED--RFYLVFEKMRGGSILSHIHKRRHFN---ELEASV-VVQDVASALDFLHNKG-- 131
Query: 222 CVIHRDFKASNILLENNFHA---KVADFGLAKQ----------------APEGRTNYLST 262
+ HRD K NIL E+ K+ DFGL P G Y++
Sbjct: 132 -IAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAP 190
Query: 263 RVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
V+ F A Y + D++S GV+L LL+G P
Sbjct: 191 EVVEAFSEEASIYDK------RCDLWSLGVILYILLSGYPP 225
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 205 ALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRV 264
+ A+G+ +L S+ C IHRD A NILL K+ DFGLA+ +
Sbjct: 199 SFQVAKGMEFLA--SRKC-IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 255
Query: 265 MGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
++APE ++SDV+S+GV+L E+ +
Sbjct: 256 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 205 ALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRV 264
+ A+G+ +L S+ C IHRD A NILL K+ DFGLA+ +
Sbjct: 197 SFQVAKGMEFLA--SRKC-IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 253
Query: 265 MGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLT 299
++APE ++SDV+S+GV+L E+ +
Sbjct: 254 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 100/235 (42%), Gaps = 42/235 (17%)
Query: 90 EELKEATNNFEPASILGEGGFGRVFKGVLSDGTAV----------AIKRLTCGGQQGDKE 139
+E++ +FE ++G G FG V + + + +KR + +++
Sbjct: 67 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 126
Query: 140 FLV--EVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWL---HGPLGVNC 194
LV + + ++ LH Y+ +D + L + G L + L L +
Sbjct: 127 VLVNGDCQWITALH----------YAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDM 176
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFG-LAKQAP 253
+ M +A+D+ L Y +HRD K N+LL+ N H ++ADFG K
Sbjct: 177 ARFYIGEMVLAIDSIHQLHY---------VHRDIKPDNVLLDVNGHIRLADFGSCLKMND 227
Query: 254 EGRTNYLSTRVMGTFGYVAPEY--AM---TGHLLVKSDVYSYGVVLLELLTGRKP 303
+G S+ +GT Y++PE AM G + D +S GV + E+L G P
Sbjct: 228 DGTVQ--SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 91/223 (40%), Gaps = 35/223 (15%)
Query: 102 ASILGEGGFGRVFKGVLSD-GTAVAIKRLTCGGQQGDKEFLV-------EVEMLSRLHHR 153
+ ILG+G VF+G G AIK + FL E E+L +L+H+
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFN------NISFLRPVDVQMREFEVLKKLNHK 67
Query: 154 NLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIAL-DAARGL 212
N+VKL + +L E P GSL + L P N + E+ I L D G+
Sbjct: 68 NIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEP--SNAYGLPESEFLIVLRDVVGGM 125
Query: 213 AYLHEDSQPCVIHRDFKASNILL----ENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTF 268
+L E+ ++HR+ K NI+ + K+ DFG A++ + + GT
Sbjct: 126 NHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ---FVXLYGTE 179
Query: 269 GYVAPEYAMTGHLL--------VKSDVYSYGVVLLELLTGRKP 303
Y+ P+ L D++S GV TG P
Sbjct: 180 EYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 100/260 (38%), Gaps = 53/260 (20%)
Query: 92 LKEATNNFEPASILGEGGFGRVFKGVLSDGTAV-AIK-----RLTCGGQQGDKEFLVEVE 145
L E + +G+G +G V + + A+ AIK ++ + + EV
Sbjct: 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVR 80
Query: 146 MLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSL----------------------- 182
++ +LHH N+ +L Y D L EL G L
Sbjct: 81 LMKKLHHPNIARLYEVYE--DEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQ 138
Query: 183 --------ESWLHGPL-GVNCHLDWETRMKIALDAAR----GLAYLHEDSQPCVIHRDFK 229
E ++G + G LD+ R K+ + R L YLH + HRD K
Sbjct: 139 ICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG---ICHRDIK 195
Query: 230 ASNILLENN--FHAKVADFGLAKQAPEGRTN--YLSTRVMGTFGYVAPEYAMTGHLLV-- 283
N L N F K+ DFGL+K+ + Y T GT +VAPE T +
Sbjct: 196 PENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGP 255
Query: 284 KSDVYSYGVVLLELLTGRKP 303
K D +S GV+L LL G P
Sbjct: 256 KCDAWSAGVLLHLLLMGAVP 275
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 94/221 (42%), Gaps = 23/221 (10%)
Query: 94 EATNNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQGDKEFL---------VEV 144
E + + S LG G FG V+ V + + + + + ++ +E+
Sbjct: 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEI 80
Query: 145 EMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGS-LESWLHGPLGVNCHLDWETRMK 203
+LSR+ H N++K++ + ++ Q ++ +GS L+ L + + LD
Sbjct: 81 AILSRVEHANIIKVLDIFENQGFFQLVM----EKHGSGLD--LFAFIDRHPRLDEPLASY 134
Query: 204 IALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTR 263
I + YL +IHRD K NI++ +F K+ DFG A G+ Y
Sbjct: 135 IFRQLVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFY---T 188
Query: 264 VMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVLLELLTGRKP 303
GT Y APE M + + +++S GV L L+ P
Sbjct: 189 FCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENP 229
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 100/235 (42%), Gaps = 42/235 (17%)
Query: 90 EELKEATNNFEPASILGEGGFGRVFKGVLSDGTAV----------AIKRLTCGGQQGDKE 139
+E++ +FE ++G G FG V + + + +KR + +++
Sbjct: 83 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 142
Query: 140 FLV--EVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWL---HGPLGVNC 194
LV + + ++ LH Y+ +D + L + G L + L L +
Sbjct: 143 VLVNGDCQWITALH----------YAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDM 192
Query: 195 HLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFG-LAKQAP 253
+ M +A+D+ L Y +HRD K N+LL+ N H ++ADFG K
Sbjct: 193 ARFYIGEMVLAIDSIHQLHY---------VHRDIKPDNVLLDVNGHIRLADFGSCLKMND 243
Query: 254 EGRTNYLSTRVMGTFGYVAPEY--AM---TGHLLVKSDVYSYGVVLLELLTGRKP 303
+G S+ +GT Y++PE AM G + D +S GV + E+L G P
Sbjct: 244 DGTVQ--SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 87/218 (39%), Gaps = 27/218 (12%)
Query: 102 ASILGEGGFGRVFKGVLSDGT------AVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNL 155
+LGEG +G+V K VL T + K+ G+ E+++L RL H+N+
Sbjct: 10 GDLLGEGSYGKV-KEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNV 68
Query: 156 VKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIA------LDAA 209
++LV + + + + E G E P E R +
Sbjct: 69 IQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVP---------EKRFPVCQAHGYFCQLI 119
Query: 210 RGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFG 269
GL YLH ++H+D K N+LL K++ G+A+ + G+
Sbjct: 120 DGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPA 176
Query: 270 YVAPEYA--MTGHLLVKSDVYSYGVVLLELLTGRKPVD 305
+ PE A + K D++S GV L + TG P +
Sbjct: 177 FQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFE 214
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 91/187 (48%), Gaps = 25/187 (13%)
Query: 98 NFEPASILGEGGFGRVFKGVLSDGTAVAIKRL--TCGGQQGDKEFLVEVEMLSRL-HHRN 154
+F P +LG G G + + D VA+KR+ C D+ EV++L H N
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS-FADR----EVQLLRESDEHPN 79
Query: 155 LVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAY 214
+++ + + +D + EL +L+ ++ + L+ T ++ GLA+
Sbjct: 80 VIRY--FCTEKDRQFQYIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQ---QTTSGLAH 133
Query: 215 LHEDSQPCVIHRDFKASNILLEN-NFHAK----VADFGLAKQAPEGRTNYLSTR--VMGT 267
LH + ++HRD K NIL+ N H K ++DFGL K+ GR ++ S R V GT
Sbjct: 134 LHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSF-SRRSGVPGT 189
Query: 268 FGYVAPE 274
G++APE
Sbjct: 190 EGWIAPE 196
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 106/256 (41%), Gaps = 48/256 (18%)
Query: 76 GSLPHPTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGVLS-DGTAVAIKRLTCGGQ 134
S+P P S + + +E ++G G +G V + + VAIK++ +
Sbjct: 40 ASMPRPHSDW--------QIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFE 91
Query: 135 Q--GDKEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYEL--VPNGSLESWLHGPL 190
K L E+ +L+RL+H ++VK++ +D + Y + + + + P+
Sbjct: 92 DLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPV 151
Query: 191 GVNCHLDWETRMKIAL-DAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLA 249
+ E +K L + G+ Y+H ++HRD K +N L+ + KV DFGLA
Sbjct: 152 YLT-----ELHIKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLA 203
Query: 250 KQA--PEG--------------------RTNYLSTRVMG---TFGYVAPEYAMTGHLLVK 284
+ PE T L ++ G T Y APE + +
Sbjct: 204 RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTE 263
Query: 285 S-DVYSYGVVLLELLT 299
+ DV+S G + ELL
Sbjct: 264 AIDVWSIGCIFAELLN 279
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 92/219 (42%), Gaps = 27/219 (12%)
Query: 96 TNNFEPASILGEGGFGRVFKGV-LSDGTAVAIKRLTCG--GQQGDKEFLVEVEMLSRLHH 152
T+ ++ +G+G F V + V L G A K + + ++ E + L H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 153 RNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIA-LDAARG 211
N+V+L + S + H L ++LV G L D R + DA+
Sbjct: 63 SNIVRL--HDSISEEGFHYLVFDLVTGGELFE------------DIVAREYYSEADASHC 108
Query: 212 LAYLHEDSQPC----VIHRDFKASNILLENNFH---AKVADFGLAKQAPEGRTNYLSTRV 264
+ + E C V+HRD K N+LL + K+ADFGLA + + +
Sbjct: 109 IQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFG--F 166
Query: 265 MGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
GT GY++PE D+++ GV+L LL G P
Sbjct: 167 AGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPP 205
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 87/213 (40%), Gaps = 33/213 (15%)
Query: 105 LGEGGFG------RVFKGVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKL 158
LG+G F +V G + K+L+ Q + E + L H N+V+L
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQ---KLEREARICRLLKHPNIVRL 86
Query: 159 VGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIA-LDAARGLAYLHE 217
+ S + H L ++LV G L D R + DA+ + + E
Sbjct: 87 --HDSISEEGHHYLIFDLVTGGELFE------------DIVAREYYSEADASHCIQQILE 132
Query: 218 DSQPC----VIHRDFKASNILLENNFH---AKVADFGLAKQAPEGRTNYLSTRVMGTFGY 270
C V+HRD K N+LL + K+ADFGLA + + + GT GY
Sbjct: 133 AVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG--FAGTPGY 190
Query: 271 VAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
++PE D+++ GV+L LL G P
Sbjct: 191 LSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 223
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 121/321 (37%), Gaps = 57/321 (17%)
Query: 77 SLPHPTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLTCGGQQG 136
S P S + +E E ++G+G FG+V+ G A+ + + +
Sbjct: 13 SFPRKASQTSIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQ 72
Query: 137 DKEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHL-LCYELVPNGSLESWLHGPLGVNCH 195
K F EV + H N+V +G + S HL + L +L S + V
Sbjct: 73 LKAFKREVMAYRQTRHENVVLFMG---ACMSPPHLAIITSLCKGRTLYSVVRDAKIV--- 126
Query: 196 LDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQA--- 252
LD +IA + +G+ YLH ++H+D K+ N+ +N + DFGL +
Sbjct: 127 LDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYDNG-KVVITDFGLFSISGVL 182
Query: 253 PEGRTNYLSTRVMGTFGYVAPEYA-------------MTGHLLVKSDVYSYGVVLLELLT 299
GR G ++APE + H SDV++ G + EL
Sbjct: 183 QAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKH----SDVFALGTIWYELHA 238
Query: 300 GRKPVDMSQPSGQENLVTW-----ARPILRDKDRLEELADPRLGGKYPKEDFIRVCTIAA 354
P +QP+ + W +P L +E++D I
Sbjct: 239 REWPFK-TQPA---EAIIWQMGTGMKPNLSQIGMGKEISD-----------------ILL 277
Query: 355 ACVAPEANQRPTMGEVVQSLK 375
C A E +RPT +++ L+
Sbjct: 278 FCWAFEQEERPTFTKLMDMLE 298
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 94/236 (39%), Gaps = 42/236 (17%)
Query: 82 TSTRFLAYEELKEATNNFEPASILGEGGFG------RVFKGVLSDGTAVAIKRLTCGGQQ 135
T TRF T ++ LG+G F +V G + K+L+ Q
Sbjct: 5 TCTRF---------TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQ 55
Query: 136 GDKEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCH 195
+ E + L H N+V+L + S + H L ++LV G L
Sbjct: 56 KLER---EARICRLLKHPNIVRL--HDSISEEGHHYLIFDLVTGGELFE----------- 99
Query: 196 LDWETRMKIA-LDAARGLAYLHEDSQPC----VIHRDFKASNILLENNFH---AKVADFG 247
D R + DA+ + + E C V+HR+ K N+LL + K+ADFG
Sbjct: 100 -DIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFG 158
Query: 248 LAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
LA + + + GT GY++PE D+++ GV+L LL G P
Sbjct: 159 LAIEVEGEQQAWFG--FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 212
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 91/221 (41%), Gaps = 36/221 (16%)
Query: 104 ILGEGGFGRVFKGV-LSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSRLH-HRNLVKLVGY 161
+LGEG RV + L A+K + EVEML + HRN+++L+ +
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEF 79
Query: 162 YSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQP 221
+ D + L +E + GS+ S +H N + E + + D A L +LH
Sbjct: 80 FEEED--RFYLVFEKMRGGSILSHIHKRRHFN---ELEASV-VVQDVASALDFLHNKG-- 131
Query: 222 CVIHRDFKASNILLENNFHA---KVADFGLAKQ----------------APEGRTNYLST 262
+ HRD K NIL E+ K+ DF L P G Y++
Sbjct: 132 -IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAP 190
Query: 263 RVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
V+ F A Y + D++S GV+L LL+G P
Sbjct: 191 EVVEAFSEEASIYDK------RCDLWSLGVILYILLSGYPP 225
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 15/100 (15%)
Query: 210 RGLAYLHEDSQPCVIHRDFKASNILLENNF---HAKVADFGLAKQ---APEGRTNYLSTR 263
G+ YLH+++ ++H D K NILL + + K+ DFG++++ A E R
Sbjct: 142 EGVYYLHQNN---IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELR------E 192
Query: 264 VMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
+MGT Y+APE + +D+++ G++ LLT P
Sbjct: 193 IMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSP 232
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 97/231 (41%), Gaps = 32/231 (13%)
Query: 82 TSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGVLSDGTA------VAIKRLTCGGQQ 135
T TRF T++++ LG+G F V + V T + K+L+ Q
Sbjct: 25 TCTRF---------TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQ 75
Query: 136 GDKEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCH 195
+ E + L H N+V+L + S + H L ++LV G L +
Sbjct: 76 KLER---EARICRLLKHPNIVRL--HDSISEEGFHYLVFDLVTGGELFEDIVAR------ 124
Query: 196 LDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFH---AKVADFGLAKQA 252
++ + + + L ++ Q ++HRD K N+LL + K+ADFGLA +
Sbjct: 125 -EYYSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEV 183
Query: 253 PEGRTNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
+ + GT GY++PE D+++ GV+L LL G P
Sbjct: 184 QGEQQAWFG--FAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPP 232
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 207 DAARGLAYLHEDSQPCVIHRDFKASNILLENN-FHAKVADFGLAK-QAPEGRTNYLST-- 262
A GL YLH ++H D KA N+LL ++ HA + DFG A P+G L T
Sbjct: 193 QALEGLEYLHSRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGD 249
Query: 263 RVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
+ GT ++APE + K DV+S ++L +L G P
Sbjct: 250 YIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 91/222 (40%), Gaps = 33/222 (14%)
Query: 96 TNNFEPASILGEGGFGRVFK------GVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSR 149
T+ ++ LG+G F V + G + K+L+ Q + E +
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQ---KLEREARICRL 59
Query: 150 LHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIA-LDA 208
L H N+V+L + S + H L ++LV G L D R + DA
Sbjct: 60 LKHPNIVRL--HDSISEEGFHYLVFDLVTGGELFE------------DIVAREYYSEADA 105
Query: 209 ARGLAYLHEDSQPC----VIHRDFKASNILLENNFH---AKVADFGLAKQAPEGRTNYLS 261
+ + + E C ++HRD K N+LL + K+ADFGLA + + +
Sbjct: 106 SHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG 165
Query: 262 TRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
GT GY++PE D+++ GV+L LL G P
Sbjct: 166 --FAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 104/232 (44%), Gaps = 46/232 (19%)
Query: 104 ILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEF----LVEVEMLSRLH-HRNLVK 157
ILG G G V F+G G VA+KR+ +F L+E+++L+ H N+++
Sbjct: 22 ILGYGSSGTVVFQGSFQ-GRPVAVKRMLI-------DFCDIALMEIKLLTESDDHPNVIR 73
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETR---MKIALDAARGLAY 214
YY S + + L + N +L+ + + +L + + + A G+A+
Sbjct: 74 ---YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAH 130
Query: 215 LHEDSQPCVIHRDFKASNILLEN-------------NFHAKVADFGLAKQAPEGRTNYLS 261
LH +IHRD K NIL+ N ++DFGL K+ G++++ +
Sbjct: 131 LHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRT 187
Query: 262 --TRVMGTFGYVAPEY------AMTGHLLVKS-DVYSYGVVLLELLT-GRKP 303
GT G+ APE T L +S D++S G V +L+ G+ P
Sbjct: 188 NLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP 239
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 91/222 (40%), Gaps = 33/222 (14%)
Query: 96 TNNFEPASILGEGGFGRVFK------GVLSDGTAVAIKRLTCGGQQGDKEFLVEVEMLSR 149
T+ ++ LG+G F V + G + K+L+ Q + E +
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQ---KLEREARICRL 59
Query: 150 LHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIA-LDA 208
L H N+V+L + S + H L ++LV G L D R + DA
Sbjct: 60 LKHPNIVRL--HDSISEEGFHYLVFDLVTGGELFE------------DIVAREYYSEADA 105
Query: 209 ARGLAYLHEDSQPC----VIHRDFKASNILLENNFH---AKVADFGLAKQAPEGRTNYLS 261
+ + + E C ++HRD K N+LL + K+ADFGLA + + +
Sbjct: 106 SHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG 165
Query: 262 TRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
GT GY++PE D+++ GV+L LL G P
Sbjct: 166 --FAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 104 ILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEF----LVEVEMLSRLH-HRNLVK 157
ILG G G V F+G G VA+KR+ +F L+E+++L+ H N+++
Sbjct: 40 ILGYGSSGTVVFQGSFQ-GRPVAVKRMLI-------DFCDIALMEIKLLTESDDHPNVIR 91
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETR---MKIALDAARGLAY 214
YY S + + L + N +L+ + + +L + + + A G+A+
Sbjct: 92 ---YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAH 148
Query: 215 LHEDSQPCVIHRDFKASNILLEN-------------NFHAKVADFGLAKQAPEGRTNYLS 261
LH +IHRD K NIL+ N ++DFGL K+ G+ +
Sbjct: 149 LHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRX 205
Query: 262 --TRVMGTFGYVAPEY--AMTGHLLVKS-DVYSYGVVLLELLT-GRKP 303
GT G+ APE T L +S D++S G V +L+ G+ P
Sbjct: 206 NLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHP 253
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 94/229 (41%), Gaps = 33/229 (14%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSDGTA-VAIKRLTCGGQQ--GDKEFLVEVEMLSRLHHR 153
+N+ ++G G +G V+ + VAIK++ + K L E+ +L+RL
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 85
Query: 154 NLVKLVGYYSSRDSSQHLLCYEL--VPNGSLESWLHGPLGVNCHLDWETRMKIALDAARG 211
+++L D + Y + + + L+ P+ L E I + G
Sbjct: 86 YIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPI----FLTEEHIKTILYNLLLG 141
Query: 212 LAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQA-PEGRTNYLS--------- 261
++HE +IHRD K +N LL + KV DFGLA+ E TN ++
Sbjct: 142 ENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPG 198
Query: 262 ----------TRVMGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLT 299
T + T Y APE + KS D++S G + ELL
Sbjct: 199 PHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 104 ILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEF----LVEVEMLSRLH-HRNLVK 157
ILG G G V F+G G VA+KR+ +F L+E+++L+ H N+++
Sbjct: 40 ILGYGSSGTVVFQGSFQ-GRPVAVKRMLI-------DFCDIALMEIKLLTESDDHPNVIR 91
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETR---MKIALDAARGLAY 214
YY S + + L + N +L+ + + +L + + + A G+A+
Sbjct: 92 ---YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAH 148
Query: 215 LHEDSQPCVIHRDFKASNILLEN-------------NFHAKVADFGLAKQAPEGRTNYLS 261
LH +IHRD K NIL+ N ++DFGL K+ G+ +
Sbjct: 149 LHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRX 205
Query: 262 --TRVMGTFGYVAPEY--AMTGHLLVKS-DVYSYGVVLLELLT-GRKP 303
GT G+ APE T L +S D++S G V +L+ G+ P
Sbjct: 206 NLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHP 253
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 83/203 (40%), Gaps = 17/203 (8%)
Query: 105 LGEGGFGRVFKGVLSDGT-AVAIKRLTCGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYS 163
LGEG F K V A A+K ++ + ++ + +++ H N+VKL +
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEG--HPNIVKLHEVF- 75
Query: 164 SRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDSQPCV 223
D L EL+ G L + H I ++++H+ V
Sbjct: 76 -HDQLHTFLVMELLNGGELFERIKK----KKHFSETEASYIMRKLVSAVSHMHDVG---V 127
Query: 224 IHRDFKASNILL---ENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGH 280
+HRD K N+L +N K+ DFG A+ P L T T Y APE
Sbjct: 128 VHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQP-LKTPCF-TLHYAAPELLNQNG 185
Query: 281 LLVKSDVYSYGVVLLELLTGRKP 303
D++S GV+L +L+G+ P
Sbjct: 186 YDESCDLWSLGVILYTMLSGQVP 208
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 207 DAARGLAYLHEDSQPCVIHRDFKASNILLENN-FHAKVADFGLAK-QAPEGRTNYLST-- 262
A GL YLH ++H D KA N+LL ++ HA + DFG A P+G L T
Sbjct: 174 QALEGLEYLHSRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGD 230
Query: 263 RVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
+ GT ++APE + K DV+S ++L +L G P
Sbjct: 231 YIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 105 LGEGGFGRVFKGVLS-DGTAVAIKRLTCGGQQG--DKEFLVEVEMLSRLHHRNLVKL--V 159
LGEG +G V+K + + VAIKR+ ++ + EV +L L HRN+++L V
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSV 101
Query: 160 GYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAARGLAYLHEDS 219
+++ R HL+ +E N L + N + G+ + H S
Sbjct: 102 IHHNHR---LHLI-FEYAEND-----LKKYMDKNPDVSMRVIKSFLYQLINGVNFCH--S 150
Query: 220 QPCVIHRDFKASNILLENNFHA-----KVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPE 274
+ C +HRD K N+LL + + K+ DFGLA+ G T + T Y PE
Sbjct: 151 RRC-LHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF--GIPIRQFTHEIITLWYRPPE 207
Query: 275 YAM-TGHLLVKSDVYSYGVVLLELL 298
+ + H D++S + E+L
Sbjct: 208 ILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 95/236 (40%), Gaps = 38/236 (16%)
Query: 97 NNFEPASILGEGGFGRVFKGVLSDGTA-VAIKRLTCGGQQ--GDKEFLVEVEMLSRLHHR 153
+N+E ++G G +G V+ + VAIK++ + K L E+ +L+RL
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 87
Query: 154 NLVKLVGYYSSRDSSQHLLCYEL--VPNGSLESWLHGPLGVNCHLDWETRMK-IALDAAR 210
+++L D + Y + + + L+ P+ + E +K I +
Sbjct: 88 YIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLT-----EQHVKTILYNLLL 142
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLS--------- 261
G ++HE +IHRD K +N LL + K+ DFGLA+ + ++
Sbjct: 143 GEKFIHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEEN 199
Query: 262 --------------TRVMGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRK 302
T + T Y APE + S D++S G + ELL K
Sbjct: 200 EEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMK 255
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 100/223 (44%), Gaps = 34/223 (15%)
Query: 99 FEPASILGEGGFGRVFKGVLSD-GTAVAIK-----RLTCGGQQGDKEFLVEVEMLSRLHH 152
+E ++G+G F V + + + G A+K + T ++ E + L H
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 87
Query: 153 RNLVKLVGYYSSRDSSQHL---------LCYELVPNGSLESWLHGPLGVNCHLDWETRMK 203
++V+L+ YSS D ++ LC+E+V ++ V H M+
Sbjct: 88 PHIVELLETYSS-DGMLYMVFEFMDGADLCFEIVKRA--DAGFVYSEAVASHY-----MR 139
Query: 204 IALDAARGLAYLHEDSQPCVIHRDFKASNILL---ENNFHAKVADFGLAKQAPEGRTNYL 260
L+A R Y H+++ +IHRD K +LL EN+ K+ FG+A Q G + +
Sbjct: 140 QILEALR---YCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL--GESGLV 191
Query: 261 STRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
+ +GT ++APE DV+ GV+L LL+G P
Sbjct: 192 AGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 234
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 112/244 (45%), Gaps = 37/244 (15%)
Query: 83 STRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIK-----RLTCGGQQG 136
+T+ +E + + ++ +LG GGFG V+ G+ +SD VAIK R++ G+
Sbjct: 9 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP 68
Query: 137 D-KEFLVEVEMLSRLH--HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVN 193
+ +EV +L ++ +++L+ ++ DS + L+ L P V
Sbjct: 69 NGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS------FVLI--------LERPEPVQ 114
Query: 194 CHLDWET-RMKIALDAARGLAY-LHEDSQPC----VIHRDFKASNILLE-NNFHAKVADF 246
D+ T R + + AR + + E + C V+HRD K NIL++ N K+ DF
Sbjct: 115 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 174
Query: 247 GLAKQAPEG-RTNYLSTRVMGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKPV 304
G + T++ TRV Y PE+ +S V+S G++L +++ G P
Sbjct: 175 GSGALLKDTVYTDFDGTRV-----YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 229
Query: 305 DMSQ 308
+ +
Sbjct: 230 EHDE 233
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 112/244 (45%), Gaps = 37/244 (15%)
Query: 83 STRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIK-----RLTCGGQQG 136
+T+ +E + + ++ +LG GGFG V+ G+ +SD VAIK R++ G+
Sbjct: 29 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP 88
Query: 137 D-KEFLVEVEMLSRLH--HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVN 193
+ +EV +L ++ +++L+ ++ DS + L+ L P V
Sbjct: 89 NGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS------FVLI--------LERPEPVQ 134
Query: 194 CHLDWET-RMKIALDAARGLAY-LHEDSQPC----VIHRDFKASNILLE-NNFHAKVADF 246
D+ T R + + AR + + E + C V+HRD K NIL++ N K+ DF
Sbjct: 135 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 194
Query: 247 GLAKQAPEG-RTNYLSTRVMGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKPV 304
G + T++ TRV Y PE+ +S V+S G++L +++ G P
Sbjct: 195 GSGALLKDTVYTDFDGTRV-----YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 249
Query: 305 DMSQ 308
+ +
Sbjct: 250 EHDE 253
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 112/244 (45%), Gaps = 37/244 (15%)
Query: 83 STRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIK-----RLTCGGQQG 136
+T+ +E + + ++ +LG GGFG V+ G+ +SD VAIK R++ G+
Sbjct: 10 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP 69
Query: 137 D-KEFLVEVEMLSRLH--HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVN 193
+ +EV +L ++ +++L+ ++ DS + L+ L P V
Sbjct: 70 NGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS------FVLI--------LERPEPVQ 115
Query: 194 CHLDWET-RMKIALDAARGLAY-LHEDSQPC----VIHRDFKASNILLE-NNFHAKVADF 246
D+ T R + + AR + + E + C V+HRD K NIL++ N K+ DF
Sbjct: 116 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 175
Query: 247 GLAKQAPEG-RTNYLSTRVMGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKPV 304
G + T++ TRV Y PE+ +S V+S G++L +++ G P
Sbjct: 176 GSGALLKDTVYTDFDGTRV-----YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 230
Query: 305 DMSQ 308
+ +
Sbjct: 231 EHDE 234
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 100/223 (44%), Gaps = 34/223 (15%)
Query: 99 FEPASILGEGGFGRVFKGVLSD-GTAVAIK-----RLTCGGQQGDKEFLVEVEMLSRLHH 152
+E ++G+G F V + + + G A+K + T ++ E + L H
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 153 RNLVKLVGYYSSRDSSQHL---------LCYELVPNGSLESWLHGPLGVNCHLDWETRMK 203
++V+L+ YSS D ++ LC+E+V ++ V H M+
Sbjct: 86 PHIVELLETYSS-DGMLYMVFEFMDGADLCFEIVKRA--DAGFVYSEAVASHY-----MR 137
Query: 204 IALDAARGLAYLHEDSQPCVIHRDFKASNILL---ENNFHAKVADFGLAKQAPEGRTNYL 260
L+A R Y H+++ +IHRD K +LL EN+ K+ FG+A Q G + +
Sbjct: 138 QILEALR---YCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL--GESGLV 189
Query: 261 STRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
+ +GT ++APE DV+ GV+L LL+G P
Sbjct: 190 AGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 112/244 (45%), Gaps = 37/244 (15%)
Query: 83 STRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIK-----RLTCGGQQG 136
+T+ +E + + ++ +LG GGFG V+ G+ +SD VAIK R++ G+
Sbjct: 10 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP 69
Query: 137 D-KEFLVEVEMLSRLH--HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVN 193
+ +EV +L ++ +++L+ ++ DS + L+ L P V
Sbjct: 70 NGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS------FVLI--------LERPEPVQ 115
Query: 194 CHLDWET-RMKIALDAARGLAY-LHEDSQPC----VIHRDFKASNILLE-NNFHAKVADF 246
D+ T R + + AR + + E + C V+HRD K NIL++ N K+ DF
Sbjct: 116 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 175
Query: 247 GLAKQAPEG-RTNYLSTRVMGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKPV 304
G + T++ TRV Y PE+ +S V+S G++L +++ G P
Sbjct: 176 GSGALLKDTVYTDFDGTRV-----YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 230
Query: 305 DMSQ 308
+ +
Sbjct: 231 EHDE 234
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 112/244 (45%), Gaps = 37/244 (15%)
Query: 83 STRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIK-----RLTCGGQQG 136
+T+ +E + + ++ +LG GGFG V+ G+ +SD VAIK R++ G+
Sbjct: 9 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP 68
Query: 137 D-KEFLVEVEMLSRLH--HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVN 193
+ +EV +L ++ +++L+ ++ DS + L+ L P V
Sbjct: 69 NGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS------FVLI--------LERPEPVQ 114
Query: 194 CHLDWET-RMKIALDAARGLAY-LHEDSQPC----VIHRDFKASNILLE-NNFHAKVADF 246
D+ T R + + AR + + E + C V+HRD K NIL++ N K+ DF
Sbjct: 115 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 174
Query: 247 GLAKQAPEG-RTNYLSTRVMGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKPV 304
G + T++ TRV Y PE+ +S V+S G++L +++ G P
Sbjct: 175 GSGALLKDTVYTDFDGTRV-----YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 229
Query: 305 DMSQ 308
+ +
Sbjct: 230 EHDE 233
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 112/244 (45%), Gaps = 37/244 (15%)
Query: 83 STRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIK-----RLTCGGQQG 136
+T+ +E + + ++ +LG GGFG V+ G+ +SD VAIK R++ G+
Sbjct: 10 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP 69
Query: 137 D-KEFLVEVEMLSRLH--HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVN 193
+ +EV +L ++ +++L+ ++ DS + L+ L P V
Sbjct: 70 NGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS------FVLI--------LERPEPVQ 115
Query: 194 CHLDWET-RMKIALDAARGLAY-LHEDSQPC----VIHRDFKASNILLE-NNFHAKVADF 246
D+ T R + + AR + + E + C V+HRD K NIL++ N K+ DF
Sbjct: 116 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 175
Query: 247 GLAKQAPEG-RTNYLSTRVMGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKPV 304
G + T++ TRV Y PE+ +S V+S G++L +++ G P
Sbjct: 176 GSGALLKDTVYTDFDGTRV-----YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 230
Query: 305 DMSQ 308
+ +
Sbjct: 231 EHDE 234
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 69/175 (39%), Gaps = 34/175 (19%)
Query: 143 EVEMLSRL-HHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETR 201
E+E+L R H N++ L Y D + EL+ G L LD R
Sbjct: 65 EIEILLRYGQHPNIITLKDVYD--DGKYVYVVTELMKGGEL-------------LDKILR 109
Query: 202 MK---------IALDAARGLAYLHEDSQPCVIHRDFKASNILLE----NNFHAKVADFGL 248
K + + + YLH V+HRD K SNIL N ++ DFG
Sbjct: 110 QKFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGF 166
Query: 249 AKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
AKQ N L T +VAPE D++S GV+L +LTG P
Sbjct: 167 AKQLRA--ENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 112/244 (45%), Gaps = 37/244 (15%)
Query: 83 STRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIK-----RLTCGGQQG 136
+T+ +E + + ++ +LG GGFG V+ G+ +SD VAIK R++ G+
Sbjct: 22 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP 81
Query: 137 D-KEFLVEVEMLSRLH--HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVN 193
+ +EV +L ++ +++L+ ++ DS + L+ L P V
Sbjct: 82 NGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS------FVLI--------LERPEPVQ 127
Query: 194 CHLDWET-RMKIALDAARGLAY-LHEDSQPC----VIHRDFKASNILLE-NNFHAKVADF 246
D+ T R + + AR + + E + C V+HRD K NIL++ N K+ DF
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 187
Query: 247 GLAKQAPEG-RTNYLSTRVMGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKPV 304
G + T++ TRV Y PE+ +S V+S G++L +++ G P
Sbjct: 188 GSGALLKDTVYTDFDGTRV-----YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
Query: 305 DMSQ 308
+ +
Sbjct: 243 EHDE 246
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 112/244 (45%), Gaps = 37/244 (15%)
Query: 83 STRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIK-----RLTCGGQQG 136
+T+ +E + + ++ +LG GGFG V+ G+ +SD VAIK R++ G+
Sbjct: 23 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP 82
Query: 137 D-KEFLVEVEMLSRLH--HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVN 193
+ +EV +L ++ +++L+ ++ DS + L+ L P V
Sbjct: 83 NGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS------FVLI--------LERPEPVQ 128
Query: 194 CHLDWET-RMKIALDAARGLAY-LHEDSQPC----VIHRDFKASNILLE-NNFHAKVADF 246
D+ T R + + AR + + E + C V+HRD K NIL++ N K+ DF
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 188
Query: 247 GLAKQAPEG-RTNYLSTRVMGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKPV 304
G + T++ TRV Y PE+ +S V+S G++L +++ G P
Sbjct: 189 GSGALLKDTVYTDFDGTRV-----YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
Query: 305 DMSQ 308
+ +
Sbjct: 244 EHDE 247
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 113/244 (46%), Gaps = 37/244 (15%)
Query: 83 STRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIK-----RLTCGGQQG 136
+T+ +E + + ++ +LG GGFG V+ G+ +SD VAIK R++ G+
Sbjct: 23 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP 82
Query: 137 DKEFL-VEVEMLSRLH--HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVN 193
+ + +EV +L ++ +++L+ ++ DS + L+ L P V
Sbjct: 83 NGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS------FVLI--------LERPEPVQ 128
Query: 194 CHLDWET-RMKIALDAARGLAY-LHEDSQPC----VIHRDFKASNILLE-NNFHAKVADF 246
D+ T R + + AR + + E + C V+HRD K NIL++ N K+ DF
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 188
Query: 247 GLAKQAPEG-RTNYLSTRVMGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKPV 304
G + T++ TRV Y PE+ +S V+S G++L +++ G P
Sbjct: 189 GSGALLKDTVYTDFDGTRV-----YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
Query: 305 DMSQ 308
+ +
Sbjct: 244 EHDE 247
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 112/244 (45%), Gaps = 37/244 (15%)
Query: 83 STRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIK-----RLTCGGQQG 136
+T+ +E + + ++ +LG GGFG V+ G+ +SD VAIK R++ G+
Sbjct: 23 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP 82
Query: 137 D-KEFLVEVEMLSRLH--HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVN 193
+ +EV +L ++ +++L+ ++ DS + L+ L P V
Sbjct: 83 NGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS------FVLI--------LERPEPVQ 128
Query: 194 CHLDWET-RMKIALDAARGLAY-LHEDSQPC----VIHRDFKASNILLE-NNFHAKVADF 246
D+ T R + + AR + + E + C V+HRD K NIL++ N K+ DF
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 188
Query: 247 GLAKQAPEG-RTNYLSTRVMGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKPV 304
G + T++ TRV Y PE+ +S V+S G++L +++ G P
Sbjct: 189 GSGALLKDTVYTDFDGTRV-----YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
Query: 305 DMSQ 308
+ +
Sbjct: 244 EHDE 247
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 113/244 (46%), Gaps = 37/244 (15%)
Query: 83 STRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIK-----RLTCGGQQG 136
+T+ +E + + ++ +LG GGFG V+ G+ +SD VAIK R++ G+
Sbjct: 22 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP 81
Query: 137 DKEFL-VEVEMLSRLH--HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVN 193
+ + +EV +L ++ +++L+ ++ DS + L+ L P V
Sbjct: 82 NGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS------FVLI--------LERPEPVQ 127
Query: 194 CHLDWET-RMKIALDAARGLAY-LHEDSQPC----VIHRDFKASNILLE-NNFHAKVADF 246
D+ T R + + AR + + E + C V+HRD K NIL++ N K+ DF
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 187
Query: 247 GLAKQAPEG-RTNYLSTRVMGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKPV 304
G + T++ TRV Y PE+ +S V+S G++L +++ G P
Sbjct: 188 GSGALLKDTVYTDFDGTRV-----YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
Query: 305 DMSQ 308
+ +
Sbjct: 243 EHDE 246
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 112/244 (45%), Gaps = 37/244 (15%)
Query: 83 STRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIK-----RLTCGGQQG 136
+T+ +E + + ++ +LG GGFG V+ G+ +SD VAIK R++ G+
Sbjct: 37 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP 96
Query: 137 D-KEFLVEVEMLSRLH--HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVN 193
+ +EV +L ++ +++L+ ++ DS + L+ L P V
Sbjct: 97 NGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS------FVLI--------LERPEPVQ 142
Query: 194 CHLDWET-RMKIALDAARGLAY-LHEDSQPC----VIHRDFKASNILLE-NNFHAKVADF 246
D+ T R + + AR + + E + C V+HRD K NIL++ N K+ DF
Sbjct: 143 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 202
Query: 247 GLAKQAPEG-RTNYLSTRVMGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKPV 304
G + T++ TRV Y PE+ +S V+S G++L +++ G P
Sbjct: 203 GSGALLKDTVYTDFDGTRV-----YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 257
Query: 305 DMSQ 308
+ +
Sbjct: 258 EHDE 261
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 112/244 (45%), Gaps = 37/244 (15%)
Query: 83 STRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIK-----RLTCGGQQG 136
+T+ +E + + ++ +LG GGFG V+ G+ +SD VAIK R++ G+
Sbjct: 42 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP 101
Query: 137 D-KEFLVEVEMLSRLH--HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVN 193
+ +EV +L ++ +++L+ ++ DS + L+ L P V
Sbjct: 102 NGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS------FVLI--------LERPEPVQ 147
Query: 194 CHLDWET-RMKIALDAARGLAY-LHEDSQPC----VIHRDFKASNILLE-NNFHAKVADF 246
D+ T R + + AR + + E + C V+HRD K NIL++ N K+ DF
Sbjct: 148 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 207
Query: 247 GLAKQAPEG-RTNYLSTRVMGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKPV 304
G + T++ TRV Y PE+ +S V+S G++L +++ G P
Sbjct: 208 GSGALLKDTVYTDFDGTRV-----YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 262
Query: 305 DMSQ 308
+ +
Sbjct: 263 EHDE 266
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 112/244 (45%), Gaps = 37/244 (15%)
Query: 83 STRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIK-----RLTCGGQQG 136
+T+ +E + + ++ +LG GGFG V+ G+ +SD VAIK R++ G+
Sbjct: 22 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP 81
Query: 137 D-KEFLVEVEMLSRLH--HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVN 193
+ +EV +L ++ +++L+ ++ DS + L+ L P V
Sbjct: 82 NGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS------FVLI--------LERPEPVQ 127
Query: 194 CHLDWET-RMKIALDAARGLAY-LHEDSQPC----VIHRDFKASNILLE-NNFHAKVADF 246
D+ T R + + AR + + E + C V+HRD K NIL++ N K+ DF
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 187
Query: 247 GLAKQAPEG-RTNYLSTRVMGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKPV 304
G + T++ TRV Y PE+ +S V+S G++L +++ G P
Sbjct: 188 GSGALLKDTVYTDFDGTRV-----YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
Query: 305 DMSQ 308
+ +
Sbjct: 243 EHDE 246
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 112/244 (45%), Gaps = 37/244 (15%)
Query: 83 STRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIK-----RLTCGGQQG 136
+T+ +E + + ++ +LG GGFG V+ G+ +SD VAIK R++ G+
Sbjct: 23 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP 82
Query: 137 D-KEFLVEVEMLSRLH--HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVN 193
+ +EV +L ++ +++L+ ++ DS + L+ L P V
Sbjct: 83 NGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS------FVLI--------LERPEPVQ 128
Query: 194 CHLDWET-RMKIALDAARGLAY-LHEDSQPC----VIHRDFKASNILLE-NNFHAKVADF 246
D+ T R + + AR + + E + C V+HRD K NIL++ N K+ DF
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 188
Query: 247 GLAKQAPEG-RTNYLSTRVMGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKPV 304
G + T++ TRV Y PE+ +S V+S G++L +++ G P
Sbjct: 189 GSGALLKDTVYTDFDGTRV-----YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
Query: 305 DMSQ 308
+ +
Sbjct: 244 EHDE 247
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 112/244 (45%), Gaps = 37/244 (15%)
Query: 83 STRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIK-----RLTCGGQQG 136
+T+ +E + + ++ +LG GGFG V+ G+ +SD VAIK R++ G+
Sbjct: 22 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP 81
Query: 137 D-KEFLVEVEMLSRLH--HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVN 193
+ +EV +L ++ +++L+ ++ DS + L+ L P V
Sbjct: 82 NGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS------FVLI--------LERPEPVQ 127
Query: 194 CHLDWET-RMKIALDAARGLAY-LHEDSQPC----VIHRDFKASNILLE-NNFHAKVADF 246
D+ T R + + AR + + E + C V+HRD K NIL++ N K+ DF
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 187
Query: 247 GLAKQAPEG-RTNYLSTRVMGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKPV 304
G + T++ TRV Y PE+ +S V+S G++L +++ G P
Sbjct: 188 GSGALLKDTVYTDFDGTRV-----YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
Query: 305 DMSQ 308
+ +
Sbjct: 243 EHDE 246
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 113/244 (46%), Gaps = 37/244 (15%)
Query: 83 STRFLAYEELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIK-----RLTCGGQQG 136
+T+ +E + + ++ +LG GGFG V+ G+ +SD VAIK R++ G+
Sbjct: 37 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP 96
Query: 137 DKEFL-VEVEMLSRLH--HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVN 193
+ + +EV +L ++ +++L+ ++ DS + L+ L P V
Sbjct: 97 NGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS------FVLI--------LERPEPVQ 142
Query: 194 CHLDWET-RMKIALDAARGLAY-LHEDSQPC----VIHRDFKASNILLE-NNFHAKVADF 246
D+ T R + + AR + + E + C V+HRD K NIL++ N K+ DF
Sbjct: 143 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 202
Query: 247 GLAKQAPEG-RTNYLSTRVMGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKPV 304
G + T++ TRV Y PE+ +S V+S G++L +++ G P
Sbjct: 203 GSGALLKDTVYTDFDGTRV-----YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 257
Query: 305 DMSQ 308
+ +
Sbjct: 258 EHDE 261
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 46/232 (19%)
Query: 104 ILGEGGFGRV-FKGVLSDGTAVAIKRLTCGGQQGDKEF----LVEVEMLSRLH-HRNLVK 157
ILG G G V F+G G VA+KR+ +F L+E+++L+ H N+++
Sbjct: 22 ILGYGSSGTVVFQGSFQ-GRPVAVKRMLI-------DFCDIALMEIKLLTESDDHPNVIR 73
Query: 158 LVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWETR---MKIALDAARGLAY 214
YY S + + L + N +L+ + + +L + + + A G+A+
Sbjct: 74 ---YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAH 130
Query: 215 LHEDSQPCVIHRDFKASNILLEN-------------NFHAKVADFGLAKQAPEGRTNYLS 261
LH +IHRD K NIL+ N ++DFGL K+ G+ +
Sbjct: 131 LHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRX 187
Query: 262 --TRVMGTFGYVAPEY------AMTGHLLVKS-DVYSYGVVLLELLT-GRKP 303
GT G+ APE T L +S D++S G V +L+ G+ P
Sbjct: 188 NLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP 239
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/239 (19%), Positives = 99/239 (41%), Gaps = 30/239 (12%)
Query: 90 EELKEATNNFEPASILGEGGFGRV--------FKGVLSDGTAVAIKRLTCGGQQGDK--- 138
+E + N++ L +G F ++ F + ++ K+ DK
Sbjct: 24 KEKDKYINDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISI 83
Query: 139 -----EFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSL----ESWLHGP 189
+F E+++++ + + + G ++ D + + YE + N S+ E +
Sbjct: 84 KSKYDDFKNELQIITDIKNEYCLTCEGIITNYD--EVYIIYEYMENDSILKFDEYFFVLD 141
Query: 190 LGVNCHLDWETRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLA 249
C + + I +Y+H + C HRD K SNIL++ N K++DFG +
Sbjct: 142 KNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNIC--HRDVKPSNILMDKNGRVKLSDFGES 199
Query: 250 KQAPEGRTNYLSTRVMGTFGYVAPEYAM--TGHLLVKSDVYSYGVVLLELLTGRKPVDM 306
+ + + +R GT+ ++ PE+ + + K D++S G+ L + P +
Sbjct: 200 EYMVDKKIK--GSR--GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSL 254
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 109/237 (45%), Gaps = 37/237 (15%)
Query: 90 EELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIK-----RLTCGGQQGD-KEFLV 142
+E + + ++ +LG GGFG V+ G+ +SD VAIK R++ G+ + +
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 143 EVEMLSRLH--HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWET 200
EV +L ++ +++L+ ++ DS + L+ L P V D+ T
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDS------FVLI--------LERPEPVQDLFDFIT 107
Query: 201 -RMKIALDAARGLAY-LHEDSQPC----VIHRDFKASNILLE-NNFHAKVADFGLAKQAP 253
R + + AR + + E + C V+HRD K NIL++ N K+ DFG
Sbjct: 108 ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 167
Query: 254 EG-RTNYLSTRVMGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKPVDMSQ 308
+ T++ TRV Y PE+ +S V+S G++L +++ G P + +
Sbjct: 168 DTVYTDFDGTRV-----YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 219
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 109/237 (45%), Gaps = 37/237 (15%)
Query: 90 EELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIK-----RLTCGGQQGD-KEFLV 142
+E + + ++ +LG GGFG V+ G+ +SD VAIK R++ G+ + +
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 143 EVEMLSRLH--HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWET 200
EV +L ++ +++L+ ++ DS + L+ L P V D+ T
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDS------FVLI--------LERPEPVQDLFDFIT 106
Query: 201 -RMKIALDAARGLAY-LHEDSQPC----VIHRDFKASNILLE-NNFHAKVADFGLAKQAP 253
R + + AR + + E + C V+HRD K NIL++ N K+ DFG
Sbjct: 107 ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 166
Query: 254 EG-RTNYLSTRVMGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKPVDMSQ 308
+ T++ TRV Y PE+ +S V+S G++L +++ G P + +
Sbjct: 167 DTVYTDFDGTRV-----YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 218
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 13/107 (12%)
Query: 202 MKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGL--AKQAPEGRTNY 259
+ I + A + +LH ++HRD K SNI + KV DFGL A E
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 260 LSTR--------VMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELL 298
L+ +GT Y++PE + K D++S G++L ELL
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 98 NFEPASILGEGGFGRVFKGVLS-DGTAVAIKRLTCGGQQGDKE-FLVEVEMLSRLHHRNL 155
+FEP +G GGFG VF+ D AIKR+ ++ +E + EV+ L++L H +
Sbjct: 7 DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 66
Query: 156 VKLVGYY 162
V+ +
Sbjct: 67 VRYFNAW 73
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 109/237 (45%), Gaps = 37/237 (15%)
Query: 90 EELKEATNNFEPASILGEGGFGRVFKGV-LSDGTAVAIK-----RLTCGGQQGD-KEFLV 142
+E + + ++ +LG GGFG V+ G+ +SD VAIK R++ G+ + +
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 143 EVEMLSRLH--HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWET 200
EV +L ++ +++L+ ++ DS + L+ L P V D+ T
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDS------FVLI--------LERPEPVQDLFDFIT 107
Query: 201 -RMKIALDAARGLAY-LHEDSQPC----VIHRDFKASNILLE-NNFHAKVADFGLAKQAP 253
R + + AR + + E + C V+HRD K NIL++ N K+ DFG
Sbjct: 108 ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 167
Query: 254 EG-RTNYLSTRVMGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKPVDMSQ 308
+ T++ TRV Y PE+ +S V+S G++L +++ G P + +
Sbjct: 168 DTVYTDFDGTRV-----YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 219
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 112/284 (39%), Gaps = 21/284 (7%)
Query: 96 TNNFEPASILGEGGFGRVFKGVLS-DGTAVAIKRLT--CGGQQGDKEFLVEVEMLSRL-H 151
T F +G G FG VFK V DG AIKR G ++ L EV + L
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 152 HRNLVKLVGYYSSRDSSQHLLCY-ELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
H ++V+ Y+S+ H+L E GSL + + + + L R
Sbjct: 68 HSHVVR---YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 124
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEG-RTNYLSTRVMGTFG 269
GL Y+H S ++H D K SNI + A + EG ++ S +VM G
Sbjct: 125 GLRYIHSMS---LVHMDIKPSNIFISRTSIPNAA-------SEEGDEDDWASNKVMFKIG 174
Query: 270 YVAPEYAMTGHLLVKSDV-YSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDR 328
+ ++ + + D + VL E T D+ + A P+ R+ D+
Sbjct: 175 DLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ 234
Query: 329 LEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQ 372
E+ RL + P+ + + P+ +RP+ +V+
Sbjct: 235 WHEIRQGRL-PRIPQVLSQEFTELLKVMIHPDPERRPSAMALVK 277
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 112/284 (39%), Gaps = 21/284 (7%)
Query: 96 TNNFEPASILGEGGFGRVFKGVLS-DGTAVAIKRLT--CGGQQGDKEFLVEVEMLSRL-H 151
T F +G G FG VFK V DG AIKR G ++ L EV + L
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69
Query: 152 HRNLVKLVGYYSSRDSSQHLLCY-ELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
H ++V+ Y+S+ H+L E GSL + + + + L R
Sbjct: 70 HSHVVR---YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 126
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEG-RTNYLSTRVMGTFG 269
GL Y+H S ++H D K SNI + A + EG ++ S +VM G
Sbjct: 127 GLRYIHSMS---LVHMDIKPSNIFISRTSIPNAA-------SEEGDEDDWASNKVMFKIG 176
Query: 270 YVAPEYAMTGHLLVKSDV-YSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDR 328
+ ++ + + D + VL E T D+ + A P+ R+ D+
Sbjct: 177 DLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ 236
Query: 329 LEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQ 372
E+ RL + P+ + + P+ +RP+ +V+
Sbjct: 237 WHEIRQGRL-PRIPQVLSQEFTELLKVMIHPDPERRPSAMALVK 279
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 106/230 (46%), Gaps = 37/230 (16%)
Query: 97 NNFEPASILGEGGFGRVFKGV-LSDGTAVAIK-----RLTCGGQQGD-KEFLVEVEMLSR 149
+ ++ +LG GGFG V+ G+ +SD VAIK R++ G+ + +EV +L +
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 68
Query: 150 LH--HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWET-RMKIAL 206
+ +++L+ ++ DS + L+ L P V D+ T R +
Sbjct: 69 VSSGFSGVIRLLDWFERPDS------FVLI--------LERPEPVQDLFDFITERGALQE 114
Query: 207 DAARGLAY-LHEDSQPC----VIHRDFKASNILLE-NNFHAKVADFGLAKQAPEG-RTNY 259
+ AR + + E + C V+HRD K NIL++ N K+ DFG + T++
Sbjct: 115 ELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 174
Query: 260 LSTRVMGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKPVDMSQ 308
TRV Y PE+ +S V+S G++L +++ G P + +
Sbjct: 175 DGTRV-----YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 219
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 112/284 (39%), Gaps = 21/284 (7%)
Query: 96 TNNFEPASILGEGGFGRVFKGVLS-DGTAVAIKRLT--CGGQQGDKEFLVEVEMLSRL-H 151
T F +G G FG VFK V DG AIKR G ++ L EV + L
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 65
Query: 152 HRNLVKLVGYYSSRDSSQHLLCY-ELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
H ++V+ Y+S+ H+L E GSL + + + + L R
Sbjct: 66 HSHVVR---YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 122
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEG-RTNYLSTRVMGTFG 269
GL Y+H S ++H D K SNI + A + EG ++ S +VM G
Sbjct: 123 GLRYIHSMS---LVHMDIKPSNIFISRTSIPNAA-------SEEGDEDDWASNKVMFKIG 172
Query: 270 YVAPEYAMTGHLLVKSDV-YSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDR 328
+ ++ + + D + VL E T D+ + A P+ R+ D+
Sbjct: 173 DLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVXAAGAEPLPRNGDQ 232
Query: 329 LEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQ 372
E+ RL + P+ + + P+ +RP+ +V+
Sbjct: 233 WHEIRQGRL-PRIPQVLSQEFTELLKVMIHPDPERRPSAMALVK 275
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 112/284 (39%), Gaps = 21/284 (7%)
Query: 96 TNNFEPASILGEGGFGRVFKGVLS-DGTAVAIKRLT--CGGQQGDKEFLVEVEMLSRL-H 151
T F +G G FG VFK V DG AIKR G ++ L EV + L
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 152 HRNLVKLVGYYSSRDSSQHLLCY-ELVPNGSLESWLHGPLGVNCHLDWETRMKIALDAAR 210
H ++V+ Y+S+ H+L E GSL + + + + L R
Sbjct: 68 HSHVVR---YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 124
Query: 211 GLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEG-RTNYLSTRVMGTFG 269
GL Y+H S ++H D K SNI + A + EG ++ S +VM G
Sbjct: 125 GLRYIHSMS---LVHMDIKPSNIFISRTSIPNAA-------SEEGDEDDWASNKVMFKIG 174
Query: 270 YVAPEYAMTGHLLVKSDV-YSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDR 328
+ ++ + + D + VL E T D+ + A P+ R+ D+
Sbjct: 175 DLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ 234
Query: 329 LEELADPRLGGKYPKEDFIRVCTIAAACVAPEANQRPTMGEVVQ 372
E+ RL + P+ + + P+ +RP+ +V+
Sbjct: 235 WHEIRQGRL-PRIPQVLSQEFTELLKVMIHPDPERRPSAMALVK 277
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 207 DAARGLAYLHEDSQPCVIHRDFKASNILLENN-FHAKVADFGLAK-QAPEGRTNYLST-- 262
A GL YLH ++H D KA N+LL ++ A + DFG A P+G L T
Sbjct: 158 QALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD 214
Query: 263 RVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
+ GT ++APE M K D++S ++L +L G P
Sbjct: 215 YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 207 DAARGLAYLHEDSQPCVIHRDFKASNILLENN-FHAKVADFGLAK-QAPEGRTNYLST-- 262
A GL YLH ++H D KA N+LL ++ A + DFG A P+G L T
Sbjct: 174 QALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD 230
Query: 263 RVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
+ GT ++APE M K D++S ++L +L G P
Sbjct: 231 YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 207 DAARGLAYLHEDSQPCVIHRDFKASNILLENN-FHAKVADFGLAK-QAPEGRTNYLST-- 262
A GL YLH ++H D KA N+LL ++ A + DFG A P+G L T
Sbjct: 172 QALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD 228
Query: 263 RVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 303
+ GT ++APE M K D++S ++L +L G P
Sbjct: 229 YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 107/230 (46%), Gaps = 37/230 (16%)
Query: 97 NNFEPASILGEGGFGRVFKGV-LSDGTAVAIK-----RLTCGGQQGDKEFL-VEVEMLSR 149
+ ++ +LG GGFG V+ G+ +SD VAIK R++ G+ + + +EV +L +
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 150 LH--HRNLVKLVGYYSSRDSSQHLLCYELVPNGSLESWLHGPLGVNCHLDWET-RMKIAL 206
+ +++L+ ++ DS + L+ L P V D+ T R +
Sbjct: 64 VSSGFSGVIRLLDWFERPDS------FVLI--------LERPEPVQDLFDFITERGALQE 109
Query: 207 DAARGLAY-LHEDSQPC----VIHRDFKASNILLE-NNFHAKVADFGLAKQAPEG-RTNY 259
+ AR + + E + C V+HRD K NIL++ N K+ DFG + T++
Sbjct: 110 ELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 169
Query: 260 LSTRVMGTFGYVAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKPVDMSQ 308
TRV Y PE+ +S V+S G++L +++ G P + +
Sbjct: 170 DGTRV-----YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 214
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,915,103
Number of Sequences: 62578
Number of extensions: 497082
Number of successful extensions: 3900
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 869
Number of HSP's successfully gapped in prelim test: 223
Number of HSP's that attempted gapping in prelim test: 1289
Number of HSP's gapped (non-prelim): 1190
length of query: 443
length of database: 14,973,337
effective HSP length: 102
effective length of query: 341
effective length of database: 8,590,381
effective search space: 2929319921
effective search space used: 2929319921
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)