BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013408
(443 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q66GR0|FLA17_ARATH Fasciclin-like arabinogalactan protein 17 OS=Arabidopsis thaliana
GN=FLA17 PE=2 SV=1
Length = 458
Score = 578 bits (1489), Expect = e-164, Method: Compositional matrix adjust.
Identities = 310/419 (73%), Positives = 349/419 (83%), Gaps = 8/419 (1%)
Query: 30 LLMFIFPLQLTASMQLQGNNA--THSGQINSNSVLVALLDSHYTELSELVEKALLLQPLE 87
L +F L +A+ L N + + SGQINSNSVLVALLDS YTEL+ELVEKALLLQ LE
Sbjct: 14 LFLFFSVLIFSAASALSKNQSPSSGSGQINSNSVLVALLDSRYTELAELVEKALLLQTLE 73
Query: 88 DAVGKHSITIFAPKNEALERDLDPEFKRFLLEPGNLKSLQTLLLHHIVSTRIELNRTATE 147
DAVG+H+ITIFAP+NEALERDLDPEFKRFLLEPGNLKSLQTLL+ HI+ R+ N+ +E
Sbjct: 74 DAVGRHNITIFAPRNEALERDLDPEFKRFLLEPGNLKSLQTLLMFHIIPNRVGSNQWPSE 133
Query: 148 ST---QHHTLSSDSVELTSHDSGDKFISQSKVIHPNAVDRPDGVIHGIERLLIPRSVQQD 204
+ +HHTL +D V L S+ G K + +++I P+ + RPDG+IHGIERLLIPRSVQ+D
Sbjct: 134 ESGRVKHHTLGNDQVRL-SNGQGKKMVDLAEIIRPDDLTRPDGLIHGIERLLIPRSVQED 192
Query: 205 FNNRRNLRSISAVRPEGAPEVDPRTNRLKKPTPASKPGSSPALPVYYAMAPGPSLAPAPA 264
FN RR+L+SISAV PEGAPEVDPRTNRLKKP GS PALP+ AMAPGPSLAPAPA
Sbjct: 193 FNRRRSLQSISAVLPEGAPEVDPRTNRLKKPAAPVPAGSPPALPIQSAMAPGPSLAPAPA 252
Query: 265 PGPGGPHHHFNGEKQVKDFIQTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLA 324
PGPGG HHF+GE QVKDFI TLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLA
Sbjct: 253 PGPGGKQHHFDGEAQVKDFIHTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLA 312
Query: 325 PNDEAMAKLTTDQLSEPGAPEQIIYYHVIPEYQTEESMYNAVRRFGKISYDTLRLPHKVL 384
PNDEAMAKLTTDQLSEPGAPEQI+YYH+IPEYQTEESMYN+VRRFGK+ +DTLR PHKV
Sbjct: 313 PNDEAMAKLTTDQLSEPGAPEQIVYYHIIPEYQTEESMYNSVRRFGKVKFDTLRFPHKVA 372
Query: 385 AQEADGSVKFGHGDGSAYLFDPDIYTDGRISVQGIDGVLFPPEETSTNYQKVKKMSKSL 443
A+EADGSVKFG G+ SAYLFDPDIYTDGRISVQGIDGVLFP EE + VKK K +
Sbjct: 373 AKEADGSVKFGDGEKSAYLFDPDIYTDGRISVQGIDGVLFPQEEEVV--ESVKKPVKKI 429
>sp|Q8RWC5|FLA16_ARATH Fasciclin-like arabinogalactan protein 16 OS=Arabidopsis thaliana
GN=FLA16 PE=2 SV=1
Length = 445
Score = 572 bits (1474), Expect = e-162, Method: Compositional matrix adjust.
Identities = 308/400 (77%), Positives = 341/400 (85%), Gaps = 6/400 (1%)
Query: 48 NNATHSGQINSNSVLVALLDSHYTELSELVEKALLLQPLEDAVGKHSITIFAPKNEALER 107
+N GQINSNSVLVALLDSHYTEL+ELVEKALLLQ LE+AVGKH+ITIFAP+N+ALER
Sbjct: 26 DNKPVPGQINSNSVLVALLDSHYTELAELVEKALLLQTLEEAVGKHNITIFAPRNDALER 85
Query: 108 DLDPEFKRFLLEPGNLKSLQTLLLHHIVSTRIELNRTATESTQHHTLSSDSVELTSHDSG 167
+LDP FK FLLEP NLKSLQ+LL+ HI+ RI + + S H TLS+D + LT D
Sbjct: 86 NLDPLFKSFLLEPRNLKSLQSLLMFHILPKRITSPQWPSLSHHHRTLSNDHLHLTV-DVN 144
Query: 168 DKFISQSKVIHPNAVDRPDGVIHGIERLLIPRSVQQDFNNRRNLRSISAVRPEGAPEVDP 227
+ +++I P+ V RPDG+IHGIERLLIPRSVQ+DFN RR+LRSISAV PEGAPEVDP
Sbjct: 145 TLKVDSAEIIRPDDVIRPDGIIHGIERLLIPRSVQEDFNRRRSLRSISAVIPEGAPEVDP 204
Query: 228 RTNRLKKPTPASKPGSSPALPVYYAMAPGPSLAPAPAPGPGGPHHHFNGEKQVKDFIQTL 287
RT+RLKKP+PA G+ P LP+Y AM+PGPSLAPAPAPGPGGP HFNG+ QVKDFI TL
Sbjct: 205 RTHRLKKPSPAVPAGAPPVLPIYDAMSPGPSLAPAPAPGPGGPRGHFNGDAQVKDFIHTL 264
Query: 288 LHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQI 347
LHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQI
Sbjct: 265 LHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQI 324
Query: 348 IYYHVIPEYQTEESMYNAVRRFGKISYDTLRLPHKVLAQEADGSVKFGHGDGSAYLFDPD 407
+YYH+IPEYQTEESMYNAVRRFGK+ YD+LR PHKVLAQEADGSVKFGHGDGSAYLFDPD
Sbjct: 325 MYYHIIPEYQTEESMYNAVRRFGKVKYDSLRFPHKVLAQEADGSVKFGHGDGSAYLFDPD 384
Query: 408 IYTDGRISVQGIDGVLFPPEETSTNYQK-----VKKMSKS 442
IYTDGRISVQGIDGVLFP EET K VKK+SKS
Sbjct: 385 IYTDGRISVQGIDGVLFPKEETPATEIKPAAPVVKKVSKS 424
>sp|Q93W32|FLA18_ARATH Fasciclin-like arabinogalactan protein 18 OS=Arabidopsis thaliana
GN=FLA18 PE=2 SV=1
Length = 462
Score = 556 bits (1432), Expect = e-157, Method: Compositional matrix adjust.
Identities = 304/409 (74%), Positives = 338/409 (82%), Gaps = 9/409 (2%)
Query: 26 ISFLLLMFIFPLQLTASMQLQGN-NATHSGQINSNSVLVALLDSHYTELSELVEKALLLQ 84
S + + F F L AS G+ N T SGQINSNSVLVALLDS YTEL+ELVEKALLLQ
Sbjct: 8 CSVITIFFSFFFLLNASALESGHHNITGSGQINSNSVLVALLDSRYTELAELVEKALLLQ 67
Query: 85 PLEDAVGKHSITIFAPKNEALERDLDPEFKRFLLEPGNLKSLQTLLLHHIVSTRIELNRT 144
LEDAVG+H+ITIFAP+NEALERDLDP+FKRFLL+PGNLKSLQTLLL HI+ R+ N+
Sbjct: 68 TLEDAVGRHNITIFAPRNEALERDLDPDFKRFLLQPGNLKSLQTLLLSHIIPKRVGSNQW 127
Query: 145 ATEST---QHHTLSSDSVELTSH---DSGDKFISQSKVIHPNAVDRPDGVIHGIERLLIP 198
E++ +H TL D V S +G + ++ + + P+ + RPDG+IHGIERLLIP
Sbjct: 128 PEENSGRVKHVTLGHDQVLHLSKLKGTNGKRLVNSAVITRPDDLTRPDGLIHGIERLLIP 187
Query: 199 RSVQQDFNNRRNLRSISAVRPEGAPEVDPRTNRLKK-PTPASKP-GSSPALPVYYAMAPG 256
RSVQ+DFN RRNLRSISAV PEGAPE+DPRTNRLKK T S P GS P LP+ AMAPG
Sbjct: 188 RSVQEDFNRRRNLRSISAVLPEGAPEIDPRTNRLKKSATAVSVPAGSPPVLPIESAMAPG 247
Query: 257 PSLAPAPAPGPGGPHHHFNGEKQVKDFIQTLLHYGGYNEMADILVNLTSLATEMGRLVSE 316
PSLAPAPAPGPGG H HFNG+ QVKDFI TLLHYGGYNEMADILVNLTSLATEMGRLVSE
Sbjct: 248 PSLAPAPAPGPGGAHKHFNGDAQVKDFIHTLLHYGGYNEMADILVNLTSLATEMGRLVSE 307
Query: 317 GYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIIYYHVIPEYQTEESMYNAVRRFGKISYDT 376
GYVLTVLAPNDEAM KLTTDQLSEPGAPEQI+YYH+IPEYQTEESMYN+VRRFGK+ Y+T
Sbjct: 308 GYVLTVLAPNDEAMGKLTTDQLSEPGAPEQIMYYHIIPEYQTEESMYNSVRRFGKVKYET 367
Query: 377 LRLPHKVLAQEADGSVKFGHGDGSAYLFDPDIYTDGRISVQGIDGVLFP 425
LR PHKV A+EADGSVKFG GD SAYLFDPDIYTDGRISVQGIDGVLFP
Sbjct: 368 LRFPHKVGAKEADGSVKFGSGDRSAYLFDPDIYTDGRISVQGIDGVLFP 416
>sp|Q9FT45|FLA15_ARATH Fasciclin-like arabinogalactan protein 15 OS=Arabidopsis thaliana
GN=FLA15 PE=2 SV=1
Length = 436
Score = 550 bits (1416), Expect = e-155, Method: Compositional matrix adjust.
Identities = 291/377 (77%), Positives = 328/377 (87%), Gaps = 5/377 (1%)
Query: 53 SGQINSNSVLVALLDSHYTELSELVEKALLLQPLEDAVGKHSITIFAPKNEALERDLDPE 112
SGQINSNSVLVALLDSHYTEL+ELVEKALLLQ LE+AVG+H+ITIFAP+N+ALE++LDPE
Sbjct: 27 SGQINSNSVLVALLDSHYTELAELVEKALLLQTLEEAVGQHNITIFAPRNDALEKNLDPE 86
Query: 113 FKRFLLEPGNLKSLQTLLLHHIVSTRIELNRTATESTQHHTLSSDSVELTSHDSGDKFIS 172
FK FLL+P NLKSLQ+LL+ HI+ RI + ++ H TLS+D + T+ ++
Sbjct: 87 FKSFLLQPKNLKSLQSLLMFHILPKRITSPQFSSAVVSHRTLSNDHLHFTNGK-----VN 141
Query: 173 QSKVIHPNAVDRPDGVIHGIERLLIPRSVQQDFNNRRNLRSISAVRPEGAPEVDPRTNRL 232
+++ P+ + RPDG+IHGIERLLIPRSVQ+DFN RR+LRSI+AV PEGAPEVDPRT+RL
Sbjct: 142 SAEITKPDDLTRPDGIIHGIERLLIPRSVQEDFNRRRSLRSIAAVLPEGAPEVDPRTHRL 201
Query: 233 KKPTPASKPGSSPALPVYYAMAPGPSLAPAPAPGPGGPHHHFNGEKQVKDFIQTLLHYGG 292
KK G+ P LPVY AM+PGPSLAPAPAPGPGGP HHFNGE QVKDFI TLLHYGG
Sbjct: 202 KKKPAPIPAGAPPVLPVYDAMSPGPSLAPAPAPGPGGPRHHFNGEAQVKDFIHTLLHYGG 261
Query: 293 YNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIIYYHV 352
YNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQI+YYH+
Sbjct: 262 YNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHI 321
Query: 353 IPEYQTEESMYNAVRRFGKISYDTLRLPHKVLAQEADGSVKFGHGDGSAYLFDPDIYTDG 412
IPEYQTEESMYN+VRRFGKI YD+LR PHKV AQEADGSVKFGHGDGSAYLFDPDIYTDG
Sbjct: 322 IPEYQTEESMYNSVRRFGKIRYDSLRFPHKVEAQEADGSVKFGHGDGSAYLFDPDIYTDG 381
Query: 413 RISVQGIDGVLFPPEET 429
RISVQGIDGVLFP E+T
Sbjct: 382 RISVQGIDGVLFPEEKT 398
>sp|Q8WWQ8|STAB2_HUMAN Stabilin-2 OS=Homo sapiens GN=STAB2 PE=1 SV=3
Length = 2551
Score = 48.5 bits (114), Expect = 9e-05, Method: Composition-based stats.
Identities = 39/147 (26%), Positives = 73/147 (49%), Gaps = 6/147 (4%)
Query: 57 NSNSVLVALLDSHYTELSELVEKALLLQPL-EDAVGKHSITIFAPKNEALERDLDPEFKR 115
N+ ++ +L Y++ L+E+ L L ED VG TIF P NEAL D
Sbjct: 515 NNEQTIMTMLQPRYSKFRSLLEETNLGHALDEDGVGG-PYTIFVPNNEALNNMKDGTLD- 572
Query: 116 FLLEPGNLKSLQTLLLHHIVS-TRIELNRTATESTQHHTLSSDSVELTSHDSGDKFISQS 174
+LL P + L L+ +HIV T++E+ T + ++++ ++ + D+G + ++
Sbjct: 573 YLLSPEGSRKLLELVRYHIVPFTQLEV-ATLISTPHIRSMANQLIQFNTTDNG-QILAND 630
Query: 175 KVIHPNAVDRPDGVIHGIERLLIPRSV 201
+ + +G I+ + +LIP S+
Sbjct: 631 VAMEEIEITAKNGRIYTLTGVLIPPSI 657
Score = 36.2 bits (82), Expect = 0.53, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 17/138 (12%)
Query: 72 ELSELVEKALL--------LQPLEDAVGKHSITIFAPKNEALERDLDPEFKRFLLEPGNL 123
ELS L E A+ LQP A ++T+ P +A E D+D + K F L N+
Sbjct: 1000 ELSFLSEAAIFNRWINNASLQPTLSATS--NLTVLVPSQQATE-DMDQDEKSFWLSQSNI 1056
Query: 124 KSLQTLLLHHIVST-RI-ELNRTATESTQHHTLSSDSVELTSHDSGDKFISQSKVIHPNA 181
+L + H ++ T R+ +L ++ +L + + L D S V NA
Sbjct: 1057 PAL--IKYHMLLGTYRVADLQTLSSSDMLATSLQGNFLHLAKVDGNITIEGASIVDGDNA 1114
Query: 182 VDRPDGVIHGIERLLIPR 199
+GVIH I ++L+P+
Sbjct: 1115 AT--NGVIHIINKVLVPQ 1130
>sp|Q8R4U0|STAB2_MOUSE Stabilin-2 OS=Mus musculus GN=Stab2 PE=1 SV=1
Length = 2559
Score = 47.8 bits (112), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 4/155 (2%)
Query: 57 NSNSVLVALLDSHYTELSELVEKALLLQPLEDAVGKHSITIFAPKNEALERDLDPEFKRF 116
N ++ +L Y + L+EK + Q LE TIF P NEAL ++ +
Sbjct: 522 NPQQTIMTMLQPRYGKFRSLLEKTNVGQALEKGGIDEPYTIFVPSNEALS-NMTAGVLDY 580
Query: 117 LLEPGNLKSLQTLLLHHIVS-TRIELNRTATESTQHHTLSSDSVELTSHDSGDKFISQSK 175
LL P + L L+ +HIV+ T++E+ ST H ++ + + S + ++ +
Sbjct: 581 LLSPEGSRKLLELVRYHIVAFTQLEV--ATLVSTLHIRSMANQIITFNISSKGQILANNV 638
Query: 176 VIHPNAVDRPDGVIHGIERLLIPRSVQQDFNNRRN 210
+ V +G I+ + +LIP S+ +R N
Sbjct: 639 AVDETEVAAKNGRIYTLTGVLIPPSILPILPHRCN 673
>sp|Q62009|POSTN_MOUSE Periostin OS=Mus musculus GN=Postn PE=1 SV=2
Length = 838
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 82/167 (49%), Gaps = 22/167 (13%)
Query: 52 HSGQINSNSVLVALLDSHYTELSELVEK-------------ALLLQPLEDAVGKHS-ITI 97
H QI +N V V ++D T++ ++ A + L +++G+ T+
Sbjct: 215 HGNQIATNGV-VHVIDRVLTQIGTSIQDFLEAEDDLSSFRAAAITSDLLESLGRDGHFTL 273
Query: 98 FAPKNEALERDLDPEFKRFLLEPGNLKSLQTLLLHHIVSTRIELNRTATESTQHHTLSSD 157
FAP NEA E+ +R + G+ + + L+ +HI++T ++ + T T+ +
Sbjct: 274 FAPTNEAFEKLPRGVLERIM---GDKVASEALMKYHILNT-LQCSEAITGGAVFETMEGN 329
Query: 158 SVELTSHDSGDKF-ISQSKVIHPNAVDRPDGVIHGIERLLIPRSVQQ 203
++E+ GD I+ K+++ + +GVIH I+ +LIP S +Q
Sbjct: 330 TIEIGCE--GDSISINGIKMVNKKDIVTKNGVIHLIDEVLIPDSAKQ 374
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 60 SVLVALLDSHYTELSELVEKALLLQPLEDAVGKHSITIFAPKNEALERDLDPEFKRFLLE 119
++ A HY+++S+L E+ GK S T FAP NEA E +LD + +R L
Sbjct: 108 GIVGATTTQHYSDVSKL---------REEIEGKGSYTYFAPSNEAWE-NLDSDIRRGLEN 157
Query: 120 PGNLKSLQTLLLHHIVSTRI---ELNRTATESTQHHTLSSDSVELTSHDSGDKFISQSKV 176
N++ L L H+V+ R+ +L + ++ L + + + +G ++ ++V
Sbjct: 158 NVNVELLNA-LHSHMVNKRMLTKDLKHGMVIPSMYNNL---GLFINHYPNGVVTVNCARV 213
Query: 177 IHPNAVDRPDGVIHGIERLL--IPRSVQQDFNNRRNLRSISA 216
IH N + +GV+H I+R+L I S+Q +L S A
Sbjct: 214 IHGNQI-ATNGVVHVIDRVLTQIGTSIQDFLEAEDDLSSFRA 254
>sp|Q8CFM6|STAB2_RAT Stabilin-2 (Fragment) OS=Rattus norvegicus GN=Stab2 PE=1 SV=1
Length = 1431
Score = 47.0 bits (110), Expect = 3e-04, Method: Composition-based stats.
Identities = 43/150 (28%), Positives = 75/150 (50%), Gaps = 11/150 (7%)
Query: 54 GQINSNSVLVALLDSHYTELSELVEKALLLQPLEDAVGKHS-ITIFAPKNEALERDLDPE 112
G++ N VA + YT+ S+L++ + LL + D++ H+ +T+F P ++ALE L PE
Sbjct: 602 GRVLQNLTTVAA-NHGYTKFSKLIQDSGLLSVITDSI--HTPVTVFWPTDKALEA-LPPE 657
Query: 113 FKRFLLEPGNLKSLQTLLLHHIVSTRIELNRTATESTQHHTLSSDSVEL---TSHDSGDK 169
+ FL N L++ L H++ L S TL + + T D G+
Sbjct: 658 QQDFLFNQDNKDKLKSYLKFHVIRDSKALASDLPRSASWKTLQGSELSVRCGTGSDIGEL 717
Query: 170 FISQS--KVIHPNAVDRPDGVIHGIERLLI 197
F+++ + IH + GV +GI+ LL+
Sbjct: 718 FLNEQMCRFIH-RGLLFDVGVAYGIDCLLM 746
>sp|Q15063|POSTN_HUMAN Periostin OS=Homo sapiens GN=POSTN PE=1 SV=2
Length = 836
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 82/166 (49%), Gaps = 20/166 (12%)
Query: 52 HSGQINSNSVLVALLDSHYTELSELVEK-------------ALLLQPLEDAVGKHS-ITI 97
H QI +N V V ++D T++ ++ A + + +A+G+ T+
Sbjct: 213 HGNQIATNGV-VHVIDRVLTQIGTSIQDFIEAEDDLSSFRAAAITSDILEALGRDGHFTL 271
Query: 98 FAPKNEALERDLDPEFKRFLLEPGNLKSLQTLLLHHIVSTRIELNRTATESTQHHTLSSD 157
FAP NEA E+ +R + G+ + + L+ +HI++T ++ + + TL +
Sbjct: 272 FAPTNEAFEKLPRGVLERIM---GDKVASEALMKYHILNT-LQCSESIMGGAVFETLEGN 327
Query: 158 SVELTSHDSGDKFISQSKVIHPNAVDRPDGVIHGIERLLIPRSVQQ 203
++E+ D ++ K+++ + +GVIH I+++LIP S +Q
Sbjct: 328 TIEIGC-DGDSITVNGIKMVNKKDIVTNNGVIHLIDQVLIPDSAKQ 372
Score = 40.0 bits (92), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 69/135 (51%), Gaps = 11/135 (8%)
Query: 87 EDAVGKHSITIFAPKNEALERDLDPEFKRFLLEPGNLKSLQTLLLHHIVSTRI---ELNR 143
E+ GK S T FAP NEA + +LD + +R L N++ L L H+++ R+ +L
Sbjct: 124 EEIEGKGSFTYFAPSNEAWD-NLDSDIRRGLESNVNVELLNA-LHSHMINKRMLTKDLKN 181
Query: 144 TATESTQHHTLSSDSVELTSHDSGDKFISQSKVIHPNAVDRPDGVIHGIERLL--IPRSV 201
+ ++ L + + + +G ++ +++IH N + +GV+H I+R+L I S+
Sbjct: 182 GMIIPSMYNNL---GLFINHYPNGVVTVNCARIIHGNQI-ATNGVVHVIDRVLTQIGTSI 237
Query: 202 QQDFNNRRNLRSISA 216
Q +L S A
Sbjct: 238 QDFIEAEDDLSSFRA 252
>sp|P82198|BGH3_MOUSE Transforming growth factor-beta-induced protein ig-h3 OS=Mus
musculus GN=Tgfbi PE=2 SV=1
Length = 683
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 54/113 (47%), Gaps = 7/113 (6%)
Query: 91 GKHSITIFAPKNEALERDLDPEFKRFLLEPGNLKSLQTLLLHHIVSTRIELNRTATESTQ 150
G T+ AP NEA E+ R L +P ++L+ LL +HI+ + +
Sbjct: 271 GDGQFTLLAPTNEAFEKIPAETLNRILGDP---EALRDLLNNHILKSAM-CAEAIVAGMS 326
Query: 151 HHTLSSDSVELTSHDSGDKF-ISQSKVIHPNAVDRPDGVIHGIERLLIPRSVQ 202
TL ++E+ SGDK I+ VI + +GVIH I+ LLIP S +
Sbjct: 327 METLGGTTLEVGC--SGDKLTINGKAVISNKDILATNGVIHFIDELLIPDSAK 377
>sp|O11780|BGH3_PIG Transforming growth factor-beta-induced protein ig-h3 OS=Sus scrofa
GN=TGFBI PE=1 SV=1
Length = 683
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 69/170 (40%), Gaps = 34/170 (20%)
Query: 91 GKHSITIFAPKNEALERDLDPEFKRFLLEPGNLKSLQTLLLHHIVSTRIELNRTATESTQ 150
G T+ AP NEA E+ R L +P ++L+ LL +HI+ + +
Sbjct: 271 GDGQYTLLAPSNEAFEKIPAETLNRILGDP---EALRDLLNNHILKSAM-CAEAIVAGLS 326
Query: 151 HHTLSSDSVELTSHDSGDKFISQSK-VIHPNAVDRPDGVIHGIERLLIPRSVQQDF---- 205
TL ++E+ SGD K +I V +GVIH I+ LLIP S + F
Sbjct: 327 LETLEGTTLEVGC--SGDMLTINGKPIISNKDVLATNGVIHFIDELLIPDSAKTLFELAA 384
Query: 206 ----------------------NNRRNLRS-ISAVRPEGAPEVDPRTNRL 232
N R L + +++V +G P +D RT L
Sbjct: 385 ESDVSTAVDLFRQAGLGSHLSGNERLTLLAPMNSVFKDGTPRIDARTKNL 434
>sp|Q15582|BGH3_HUMAN Transforming growth factor-beta-induced protein ig-h3 OS=Homo
sapiens GN=TGFBI PE=1 SV=1
Length = 683
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 53/116 (45%), Gaps = 7/116 (6%)
Query: 91 GKHSITIFAPKNEALERDLDPEFKRFLLEPGNLKSLQTLLLHHIVSTRIELNRTATESTQ 150
G T+ AP NEA E+ R L +P ++L+ LL +HI+ + +
Sbjct: 271 GNGQYTLLAPTNEAFEKIPSETLNRILGDP---EALRDLLNNHILKSAM-CAEAIVAGLS 326
Query: 151 HHTLSSDSVELTSHDSGDKFISQSKVIHPNA-VDRPDGVIHGIERLLIPRSVQQDF 205
TL ++E+ SGD K I N + +GVIH I+ LLIP S + F
Sbjct: 327 VETLEGTTLEVGC--SGDMLTINGKAIISNKDILATNGVIHYIDELLIPDSAKTLF 380
>sp|P74615|Y1483_SYNY3 Uncharacterized protein sll1483 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll1483 PE=4 SV=1
Length = 180
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 70/138 (50%), Gaps = 8/138 (5%)
Query: 61 VLVALLDSHYTELSELVEKALLLQPLEDAVGKHSITIFAPKNEALERDLDPEFKRFLLEP 120
V VA + ++ L V+ A L++ L + T+FAP N+A L LL P
Sbjct: 49 VEVAAGNETFSTLVAAVKAADLVEALS---AEGPFTVFAPTNDAFAA-LPAGTVESLLLP 104
Query: 121 GNLKSLQTLLLHHIVSTRIELNRTATESTQHHTLSSDSVELTSHDSGDKFISQSKVIHPN 180
N L +L +H+V +I + +S + +L+ +++ D G ++++ VI +
Sbjct: 105 ENKDKLVKILTYHVVPGKITAAQV--QSGEVASLAGEALTFKVKD-GKVKVNKATVISAD 161
Query: 181 AVDRPDGVIHGIERLLIP 198
VD +GVIH I+++++P
Sbjct: 162 -VDASNGVIHVIDQVILP 178
>sp|Q95215|BGH3_RABIT Transforming growth factor-beta-induced protein ig-h3
OS=Oryctolagus cuniculus GN=TGFBI PE=2 SV=2
Length = 683
Score = 41.2 bits (95), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 7/108 (6%)
Query: 96 TIFAPKNEALERDLDPEFKRFLLEPGNLKSLQTLLLHHIVSTRIELNRTATESTQHHTLS 155
T+ AP NEA E+ R L +P ++L+ LL +HI+ + + TL
Sbjct: 276 TLLAPTNEAKEKIPTETLNRILGDP---EALRDLLNNHILKSAM-CAEAIVAGLSMETLE 331
Query: 156 SDSVELTSHDSGDKFISQSKVIHPNA-VDRPDGVIHGIERLLIPRSVQ 202
+ ++E+ SGD K I N V +GVIH I+ LLIP S +
Sbjct: 332 ATTLEVGC--SGDMLTINGKAIISNKDVLATNGVIHFIDELLIPDSAK 377
>sp|Q8LEE9|FLA12_ARATH Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis thaliana
GN=FLA12 PE=2 SV=2
Length = 249
Score = 37.4 bits (85), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 64/134 (47%), Gaps = 10/134 (7%)
Query: 300 LVNLTSLATEM-GRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQI--IYYHVIPEY 356
L+ T +A ++ G+L + +T+ AP+D + L L+ +Q+ I +HVIP Y
Sbjct: 56 LLKSTGVANQLYGQLNNSDNGITIFAPSDSSFTGLKAGTLNSLTDEQQVELIQFHVIPSY 115
Query: 357 QTE---ESMYNAVRRFGKISYDTLRLPHKVLAQEADGSVKFGHGDGSAYLFDPDIYTDGR 413
+ +++ N +R S D P V ++ G + + ++Y+DG+
Sbjct: 116 VSSSNFQTISNPLRTQAGDSADG-HFPLNVTTSGNTVNITSGVTNTTV---SGNVYSDGQ 171
Query: 414 ISVQGIDGVLFPPE 427
++V +D VL P +
Sbjct: 172 LAVYQVDKVLLPQQ 185
>sp|Q8LEJ6|FLA11_ARATH Fasciclin-like arabinogalactan protein 11 OS=Arabidopsis thaliana
GN=FLA11 PE=2 SV=2
Length = 246
Score = 36.2 bits (82), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 75/173 (43%), Gaps = 26/173 (15%)
Query: 262 APAPGPGGPHHHFNGEKQVKDFIQTLLHYGGYNEMADILVNLT----SLATEMGRLVSEG 317
APAPGP GP + I +L G + L+ T + T++ S G
Sbjct: 26 APAPGPSGPTN-----------ITAILEKAGQFTLFIRLLKSTQASDQINTQLNSSSSNG 74
Query: 318 YVLTVLAPNDEAMAKLTTDQLSEPGAPE--QIIYYHVIPEYQTE---ESMYNAVRRFGKI 372
LTV AP D A L + L+ + Q++ +HV+P T +++ N +R
Sbjct: 75 --LTVFAPTDNAFNSLKSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQTVSNPLRTQAGD 132
Query: 373 SYDTLRLPHKVLAQEADGSVKFGHGDGSAYLFDPDIYTDGRISVQGIDGVLFP 425
+ + P + + + V G SA + + +Y+D +++V +D VL P
Sbjct: 133 GQNG-KFPLNITS--SGNQVNITTGVVSATVAN-SVYSDKQLAVYQVDQVLLP 181
>sp|Q9ZWA8|FLA9_ARATH Fasciclin-like arabinogalactan protein 9 OS=Arabidopsis thaliana
GN=FLA9 PE=1 SV=1
Length = 247
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 12/93 (12%)
Query: 284 IQTLLHYGGYNEMADILVNLTSLATEMGRLV---SEGYVLTVLAPNDEAMAKL---TTDQ 337
+ +L GG L+N+T + +++ V SEG +TV AP D A L T +Q
Sbjct: 40 LTAILEKGGQFTTFIHLLNITQVGSQVNIQVNSSSEG--MTVFAPTDNAFQNLKPGTLNQ 97
Query: 338 LSEPGAPEQIIYYHVIPEYQTEE---SMYNAVR 367
LS P ++I YHV P+Y + + S+ N VR
Sbjct: 98 LS-PDDQVKLILYHVSPKYYSMDDLLSVSNPVR 129
>sp|Q8R4Y4|STAB1_MOUSE Stabilin-1 OS=Mus musculus GN=Stab1 PE=1 SV=1
Length = 2571
Score = 34.7 bits (78), Expect = 1.4, Method: Composition-based stats.
Identities = 44/166 (26%), Positives = 71/166 (42%), Gaps = 29/166 (17%)
Query: 45 LQGNNATHSGQINSNSVLVALLDSHYTELSELVEKALLLQPLEDAVGKHSITIFAPKNEA 104
L G++ GQI +++ + +T ++E L L+ G T+FAP NEA
Sbjct: 502 LPGDSKKTVGQILASTEV-------FTRFETILENCGLPSILD---GPGPFTVFAPSNEA 551
Query: 105 LERDLDPEFKRFLLEPGNLKSLQTLLLHHI-------VSTRIELNRTATESTQHHTLSSD 157
++ D +L G L LQ L+ +HI V I R T + Q T++
Sbjct: 552 VDSLRDGRLI-YLFTAG-LSKLQELVRYHIYNHGQLTVEKLISKGRVLTMANQVLTVNI- 608
Query: 158 SVELTSHDSGDKFISQSKVIHPNAVDRP--DGVIHGIERLLIPRSV 201
G + + I VD P +GVIH +E +L+P ++
Sbjct: 609 -------SEGGRILLGPGGIPVRRVDVPAANGVIHMLEGILLPPTI 647
>sp|B6JGU8|CLPX_OLICO ATP-dependent Clp protease ATP-binding subunit ClpX OS=Oligotropha
carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5)
GN=clpX PE=3 SV=1
Length = 424
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 59/165 (35%), Gaps = 20/165 (12%)
Query: 192 IERLLIPRSVQQDFNNRRNLRSISAVRPEGAPEVDPRTNRLKKPTPASKPGSSPALPVYY 251
+E +++ D+N R R I + E+D + + P+
Sbjct: 157 VENIILKLLQAADYNVERAQRGIVYI-----DEIDKISRKSDNPSITRDVSGEGVQQALL 211
Query: 252 AMAPGPSLAPAPAPGPGGPHHHFNGEKQVKDFIQTLLHYGGYNEMADILVNLTSLATEMG 311
+ G + P G P F QV D L GG L + + G
Sbjct: 212 KIMEGTVASVPPQGGRKHPQQEF---LQV-DTTNILFICGGA------FAGLEKIISSRG 261
Query: 312 RLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIIYYHVIPEY 356
R S G+ +VLAP D T ++ PE ++ Y +IPE+
Sbjct: 262 RTTSIGFAASVLAPEDR-----RTGEIFREVEPEDLLKYGLIPEF 301
>sp|P10674|FAS1_DROME Fasciclin-1 OS=Drosophila melanogaster GN=Fas1 PE=1 SV=1
Length = 652
Score = 34.3 bits (77), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 65/145 (44%), Gaps = 33/145 (22%)
Query: 67 DSHYTELSELVEKALLLQPLEDAVGKHSITIFAPKNEALERDLDPEFKRFLLEPGNLKSL 126
DS ++ L+E Q + S TIF P NEA +R KS
Sbjct: 30 DSELSQFYSLLESN---QIANSTLSLRSCTIFVPTNEAFQR---------------YKSK 71
Query: 127 QTLLLHHIVSTRIELNRTATESTQHHTLSSDS-----VELTSHDSGDKFISQSKVIHPNA 181
+L+HI + T+ +T+SSD + +T + +GD F++ +++I +
Sbjct: 72 TAHVLYHITT------EAYTQKRLPNTVSSDMAGNPPLYITKNSNGDIFVNNARIIPSLS 125
Query: 182 VD-RPDG---VIHGIERLLIPRSVQ 202
V+ DG ++H I+ +L P +V+
Sbjct: 126 VETNSDGKRQIMHIIDEVLEPLTVK 150
>sp|Q99160|HOY1_YARLI Homeobox protein HOY1 OS=Yarrowia lipolytica (strain CLIB 122 / E
150) GN=HOY1 PE=4 SV=2
Length = 509
Score = 33.5 bits (75), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 31/77 (40%), Gaps = 3/77 (3%)
Query: 247 LPVYYAMAPGPSLAPAPAPGPGGPHHHFNGEKQVKDFIQTLLHYGGYNEMADILVNLTSL 306
L V P + P P P P HHH V H +N ++D NLTS
Sbjct: 372 LSVTSHCEPSHMIEPTPTPTPVANHHHHRSADSVAHVTNPSGHVTNHNHLSDPAANLTS- 430
Query: 307 ATEMGRLVSEGYVLTVL 323
T +G V+ G+ VL
Sbjct: 431 -TILGN-VTPGHTTPVL 445
>sp|Q9TTF0|NR2E3_BOVIN Photoreceptor-specific nuclear receptor OS=Bos taurus GN=NR2E3 PE=1
SV=2
Length = 411
Score = 32.3 bits (72), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 33/75 (44%), Gaps = 9/75 (12%)
Query: 202 QQDFNNRRNLRSISAVRPEGA-PEVDPRTNRLKKPTPASKPGSSPALPVYYAMAPGP-SL 259
Q N R RS + VR + E +PR L P + P S PV A A GP +L
Sbjct: 107 QDAVQNERQPRSTAQVRMDSVESETEPRLQPLATPPALAGPSSRGPTPVSAARALGPQAL 166
Query: 260 APAPAPGPGGPHHHF 274
P PG HHHF
Sbjct: 167 MP---PG----HHHF 174
>sp|Q7VNA7|PSD_HAEDU Phosphatidylserine decarboxylase proenzyme OS=Haemophilus ducreyi
(strain 35000HP / ATCC 700724) GN=psd PE=3 SV=1
Length = 297
Score = 32.0 bits (71), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 61/143 (42%), Gaps = 19/143 (13%)
Query: 7 IIRSFNSFYSVSMAETRKL----ISFLLLMFIFPLQLTASMQLQGNNA---------THS 53
IIR F Y+V++AE K + F+ PL+ A Q + A +
Sbjct: 47 IIRIFAKQYNVNLAEAEKTNPADYTTFNEFFLRPLKENARPINQDDQAVCLPADGKISEL 106
Query: 54 GQINSNSVLVALLDSHYTELSELVEK-ALLLQPLEDAVGKHSITIFAPKN-EALERDLDP 111
GQIN N +L A HY L L+ + + ++ G T +P++ + D
Sbjct: 107 GQINENRLLQA--KGHYFTLETLLANDEEMAESFKN--GSFITTYLSPRDYHRVHMPCDA 162
Query: 112 EFKRFLLEPGNLKSLQTLLLHHI 134
K+ + PG+L S+ + L HI
Sbjct: 163 TLKKMIYVPGDLFSVNSFLAEHI 185
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 167,404,316
Number of Sequences: 539616
Number of extensions: 7601155
Number of successful extensions: 33109
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 190
Number of HSP's that attempted gapping in prelim test: 31293
Number of HSP's gapped (non-prelim): 1596
length of query: 443
length of database: 191,569,459
effective HSP length: 121
effective length of query: 322
effective length of database: 126,275,923
effective search space: 40660847206
effective search space used: 40660847206
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)