Your job contains 1 sequence.
>013410
MDFEVFDSSGTDDDLPPSHHNRFQRGVRPTGNGRSAVIGSASLPRMQNDMATQIHSVEQD
AYSSVLRAFKAQSDAITWEKESLITELRKELRVSDEEHRELLSKVNADDIILRIREWRKA
SGLQPGMPSIPQPVHDPAPSPTVSASRKKTKTSQSVASLSTGAPSPGMHPSVQPSSSALR
PGPPPGSKGKKPKSFSTGLAGRGQVANRGSSGAFPANGPSEAATYNPLIGRKVWTRWPED
NHFYEAVITDYNPNEGRHALVYDINTADETWEWVNLKEISPEDIKWEGDEPGISRKGGRP
GPGRGTKKPLTRGGGVSGAGRGRGTMKPKKGFPFSQNGIGKKPLGDIEILHTETLIKEVE
KVFAANHPDPTDVEKAKRVLKEQELALVNAIAKLEDASDGESEQGEHQFSQGQSMNQERG
WRKRPYSEMGGMVDGSAGNNSGQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 013410
(443 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2182345 - symbol:EML3 "AT5G13020" species:3702... 1258 3.6e-128 1
TAIR|locus:2050594 - symbol:EML4 "AT2G44440" species:3702... 477 1.0e-92 2
TAIR|locus:2099287 - symbol:EML1 "AT3G12140" species:3702... 346 2.5e-83 3
TAIR|locus:2170179 - symbol:EML2 "AT5G06780" species:3702... 478 1.8e-72 2
TAIR|locus:2095868 - symbol:AT3G57970 "AT3G57970" species... 117 3.8e-11 2
TAIR|locus:2095858 - symbol:AT3G57960 "AT3G57960" species... 108 9.0e-06 2
TAIR|locus:2147730 - symbol:AT5G20030 species:3702 "Arabi... 125 4.5e-05 1
>TAIR|locus:2182345 [details] [associations]
symbol:EML3 "AT5G13020" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008284 "positive regulation of cell
proliferation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] EMBL:CP002688 InterPro:IPR005491 Pfam:PF03735
PROSITE:PS51138 InterPro:IPR014002 SMART:SM00743 IPI:IPI00524921
RefSeq:NP_196806.2 UniGene:At.32119 ProteinModelPortal:F4K2F0
SMR:F4K2F0 PRIDE:F4K2F0 EnsemblPlants:AT5G13020.1 GeneID:831142
KEGG:ath:AT5G13020 OMA:QKTSQSI Uniprot:F4K2F0
Length = 397
Score = 1258 (447.9 bits), Expect = 3.6e-128, P = 3.6e-128
Identities = 252/402 (62%), Positives = 300/402 (74%)
Query: 1 MDFEVFDSSGTDDDLPPSHHNRFQRGVRPTGNGRSAVIGSASLPRMQNDMATQIHSVEQD 60
MD+ DSSGTDDDLPPSH R+QR RPTGNGR +V+ SA L R+ N+M TQIH +EQ+
Sbjct: 1 MDYRPSDSSGTDDDLPPSHQGRYQRNARPTGNGRPSVLNSAPLSRVHNEMETQIHLIEQE 60
Query: 61 AYSSVLRAFKAQSDAITWEKESLITELRKELRVSDEEHRELLSKVNADDIILRIREWRKA 120
AYSS+LRAFKAQSDAITWEKESLITELRKELRVSDEEHRELLS+VNAD++I RIREWRKA
Sbjct: 61 AYSSILRAFKAQSDAITWEKESLITELRKELRVSDEEHRELLSRVNADEMIRRIREWRKA 120
Query: 121 SGLQPGMPSIPQPVHDPAPSPTVSASRKKTKTSQSVASLSTGAPSPGMHPSVQPSSSALR 180
+ LQ S+PQ VHD APSP VS SRKK KTSQS+ASL+ G PSP +HPS+QPSSSALR
Sbjct: 121 NSLQS---SVPQLVHD-APSPAVSGSRKKQKTSQSIASLAMGPPSPSLHPSMQPSSSALR 176
Query: 181 XXXXXXXXXXXXXXFSTGLAGRGQVANRGSSGAFPANGPSEAATYNPLIGRKVWTRWPED 240
S G +A R +GA N P E+ +Y+PL+GRKVWT+WP+D
Sbjct: 177 RGGPPPGPKTKKPKTSMQYPSTG-IAGRPQAGAL-TNEPGESGSYDPLVGRKVWTKWPDD 234
Query: 241 NHFYEAVITDYNPNEGRHALVYDINTADETWEWVNLKEISPEDIKWEGDEPGISXXXXXX 300
N +YEAVITDYNP EGRHALVYDIN+A+ETWEWVNLKEISP DI+WEG++PGIS
Sbjct: 235 NQYYEAVITDYNPVEGRHALVYDINSANETWEWVNLKEISPGDIRWEGEDPGISRKGGHP 294
Query: 301 XXXXXXXXXLTXXXXXXXXXXXXXTMKPKKGFPFSQNGIGKKPLGDIEILHTETLIKEVE 360
+M+ ++ P +QNGIGKK LG+IEILHTETL+KEVE
Sbjct: 295 GQGRGTKTMARGGPASNAGGRGRGSMRMQQ--PKTQNGIGKKALGEIEILHTETLLKEVE 352
Query: 361 KVFAANHPDPTDVEKAKRVLKEQELALVNAIAKLEDASDGES 402
KVF + +P+P +VEKAKRVL++ ELAL++AIAKLE+ SDGES
Sbjct: 353 KVFGSVNPNPAEVEKAKRVLRDHELALMDAIAKLEEISDGES 394
>TAIR|locus:2050594 [details] [associations]
symbol:EML4 "AT2G44440" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002685 GenomeReviews:CT485783_GR
InterPro:IPR005491 Pfam:PF03735 PROSITE:PS51138 EMBL:BT029007
IPI:IPI00545628 RefSeq:NP_181972.2 UniGene:At.50138
ProteinModelPortal:Q08A72 SMR:Q08A72 PaxDb:Q08A72 PRIDE:Q08A72
EnsemblPlants:AT2G44440.1 GeneID:819051 KEGG:ath:AT2G44440
TAIR:At2g44440 eggNOG:NOG310122 HOGENOM:HOG000241095
InParanoid:Q08A72 OMA:DIEWIGE PhylomeDB:Q08A72
ProtClustDB:CLSN2915141 Genevestigator:Q08A72 Uniprot:Q08A72
Length = 429
Score = 477 (173.0 bits), Expect = 1.0e-92, Sum P(2) = 1.0e-92
Identities = 101/183 (55%), Positives = 124/183 (67%)
Query: 1 MDFEVFDSSGTDDDLPPSHH----NRFQRGVRPTGNGRSAVIGSASLPRMQNDMAT---- 52
MD + DSSGTDDDLPPSH RG R GNGR + S P+M +D+A
Sbjct: 1 MDCKSSDSSGTDDDLPPSHRVPRGGGGGRGGRVAGNGRPLNL-PPSYPKMYDDLAADMEA 59
Query: 53 QIHSVEQDAYSSVLRAFKAQSDAITWEKESLITELRKELRVSDEEHRELLSKVNADDIIL 112
QIH +E++AY SVLRAFKAQ DAI+WEKES+ITELRKEL +S+EEHRELL +VN+DD I
Sbjct: 60 QIHQIEKEAYISVLRAFKAQGDAISWEKESVITELRKELSLSNEEHRELLGRVNSDDTIR 119
Query: 113 RIREWRKASGLQPGMPSIPQPVHDPAPSPTVSASRKKTKTSQSVASLSTGAPSPGMHPSV 172
RIREWR++ G+QP M + Q VHD PSP+VSAS K K +Q + S + SP HP
Sbjct: 120 RIREWRQSGGMQPSMRNAAQVVHDTLPSPSVSASMKTHKPNQPIPSQPFASSSPSFHPQA 179
Query: 173 QPS 175
P+
Sbjct: 180 DPT 182
Score = 466 (169.1 bits), Expect = 1.0e-92, Sum P(2) = 1.0e-92
Identities = 100/202 (49%), Positives = 124/202 (61%)
Query: 202 RGQVANRGSSGAFPANGPSEAATYNPLIGRKVWTRWPEDNHFYEAVITDYNPNEGRHALV 261
RGQV NR S ++ P+ +GR+V T+WPEDN FY+A+IT YNP EGRHALV
Sbjct: 226 RGQVMNRLPSVPASSSEPTNGIDPESFLGRRVRTKWPEDNTFYDAIITQYNPVEGRHALV 285
Query: 262 YDINTADETWEWVNLKEISPEDIKWEGDEPGISXXXXXXXXXXXXXXXLTXXXXXXXXXX 321
YDI T ETWEWV L EISP DI+W G++PG+
Sbjct: 286 YDIATPSETWEWVRLSEISPGDIEWIGEDPGLGNRYNGQGHGLNRTTG-PNCVPQRGSGL 344
Query: 322 XXXTMKPKKGFPFSQNGIGKKPLGDIEILHTETLIKEVEKVFAANHPDPTDVEKAKRVLK 381
T++ KGF SQNG GKK DI I T+ LI+EVE+V +++PDP +VE+AKRVL+
Sbjct: 345 EKNTIR--KGFRTSQNGTGKKKHLDIRIRQTDVLIREVERVLRSHNPDPYEVERAKRVLE 402
Query: 382 EQELALVNAIAKLEDASDGESE 403
E E ALV AIAKL D SDGE+E
Sbjct: 403 EHEHALVGAIAKLGDISDGENE 424
>TAIR|locus:2099287 [details] [associations]
symbol:EML1 "AT3G12140" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] EMBL:CP002686 EMBL:AP002063
InterPro:IPR005491 Pfam:PF03735 PROSITE:PS51138 InterPro:IPR014002
SMART:SM00743 HOGENOM:HOG000241095 ProtClustDB:CLSN2684480
IPI:IPI00657324 RefSeq:NP_001030677.1 UniGene:At.39639
ProteinModelPortal:Q9LH54 SMR:Q9LH54 PRIDE:Q9LH54
EnsemblPlants:AT3G12140.3 GeneID:820389 KEGG:ath:AT3G12140
TAIR:At3g12140 OMA:GPHMNRN PhylomeDB:Q9LH54 Genevestigator:Q9LH54
Uniprot:Q9LH54
Length = 383
Score = 346 (126.9 bits), Expect = 2.5e-83, Sum P(3) = 2.5e-83
Identities = 75/114 (65%), Positives = 87/114 (76%)
Query: 50 MATQIHSVEQDAYSSVLRAFKAQSDAITWEKESLITELRKELRVSDEEHRELLSKVNADD 109
M TQIH +EQ+AY++VLRAFKAQSDAI+WEKESLITELRKELRVSD+EHRELLS+VN DD
Sbjct: 1 METQIHQLEQEAYTAVLRAFKAQSDAISWEKESLITELRKELRVSDDEHRELLSRVNKDD 60
Query: 110 IILRIREWRKASGLQPGMPSIPQPVHDPAPSPTVSASRKKTKTSQSVASLSTGA 163
I RIR+WR+ Q + QP D PSPT SA+RKK KT S + S GA
Sbjct: 61 TIQRIRDWRQGGASQITRHATIQPF-DVLPSPTFSAARKKQKTFPSY-NPSIGA 112
Score = 327 (120.2 bits), Expect = 2.5e-83, Sum P(3) = 2.5e-83
Identities = 56/92 (60%), Positives = 71/92 (77%)
Query: 203 GQVANRGSSGAFPANGPSEAATYNPLIGRKVWTRWPEDNHFYEAVITDYNPNEGRHALVY 262
G NR + ++G S + LIGRKVWT+WPEDNHFYEA+IT YN +EGRHALVY
Sbjct: 111 GATGNRSFNNRLVSSGISGNESAEALIGRKVWTKWPEDNHFYEAIITQYNADEGRHALVY 170
Query: 263 DINTADETWEWVNLKEISPEDIKWEGDEPGIS 294
DI+ A+ETWEWV+LKEI PEDI+W+G+E G++
Sbjct: 171 DIHAANETWEWVDLKEIPPEDIRWDGEESGVA 202
Score = 194 (73.4 bits), Expect = 2.5e-83, Sum P(3) = 2.5e-83
Identities = 38/71 (53%), Positives = 53/71 (74%)
Query: 333 PFSQNGIGKKPLG--DIEILHTETLIKEVEKVFAANHPDPTDVEKAKRVLKEQELALVNA 390
P QNG G + DIE+ +T++L+KEVE+VF + HPDP +++KAK++LKE E AL+ A
Sbjct: 241 PTQQNGSGGRRTSSDDIELFNTDSLVKEVERVFDSTHPDPLELDKAKKMLKEHEQALIAA 300
Query: 391 IAKLEDASDGE 401
IA+L D SDGE
Sbjct: 301 IARLADTSDGE 311
Score = 41 (19.5 bits), Expect = 5.2e-13, Sum P(2) = 5.2e-13
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 206 ANRGSSGAFPANGPSEAATYNPLIGRKVWTRWPEDNHFYEAVI 248
A R FP+ PS AT N ++ + N EA+I
Sbjct: 95 AARKKQKTFPSYNPSIGATGNRSFNNRLVSSGISGNESAEALI 137
Score = 38 (18.4 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 20/77 (25%), Positives = 28/77 (36%)
Query: 77 TWEKESLITELRKELRVSDEEHRELLSKVNADDIILRIREWRKASGLQPGMPSIPQPVHD 136
TWE L +++R EE L+ + R + G G P I QP +
Sbjct: 178 TWEWVDLKEIPPEDIRWDGEESGVALNIGHGSASFRGNRRGQIHGGRGRG-PRIHQPRRE 236
Query: 137 PAPSPTVSASRKKTKTS 153
P PT +TS
Sbjct: 237 LVPPPTQQNGSGGRRTS 253
>TAIR|locus:2170179 [details] [associations]
symbol:EML2 "AT5G06780" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AP002032
InterPro:IPR005491 Pfam:PF03735 PROSITE:PS51138 InterPro:IPR014002
SMART:SM00743 HOGENOM:HOG000241095 EMBL:AF428436 EMBL:AY125551
IPI:IPI00542791 RefSeq:NP_196296.1 UniGene:At.8004
ProteinModelPortal:Q9FG29 SMR:Q9FG29 IntAct:Q9FG29 PRIDE:Q9FG29
EnsemblPlants:AT5G06780.1 GeneID:830567 KEGG:ath:AT5G06780
TAIR:At5g06780 InParanoid:Q9FG29 OMA:EPYSHEL PhylomeDB:Q9FG29
ProtClustDB:CLSN2684480 Genevestigator:Q9FG29 Uniprot:Q9FG29
Length = 320
Score = 478 (173.3 bits), Expect = 1.8e-72, Sum P(2) = 1.8e-72
Identities = 96/195 (49%), Positives = 130/195 (66%)
Query: 216 ANGPSEAATYNPLIGRKVWTRWPEDNHFYEAVITDYNPNEGRHALVYDINTADETWEWVN 275
AN P+EA LIGRKVWT+WPEDN FYEAV+T YN NEGRHALVYDINT +ETWEWV+
Sbjct: 128 ANEPAEA-----LIGRKVWTKWPEDNSFYEAVVTQYNANEGRHALVYDINTVNETWEWVD 182
Query: 276 LKEISPEDIKWEGDEPGISXXXXXXXXXXXXXXXLTXXXXXXXXXXXXXTMKPKKGFPFS 335
L EI +DI+W+G+E G++ +P++ +
Sbjct: 183 LNEIPTKDIRWDGEEDGVTLNVGHGGGTTRG----NRRTLSHGGRGRGPRTQPRREHLAT 238
Query: 336 QNGIGKKPLGDIEILHTETLIKEVEKVFAANHPDPTDVEKAKRVLKEQELALVNAIAKLE 395
+NG G+K G+IE+ +T++L+KEVE+VF +N PDP +++KAK++LKE E AL+ AIA+L
Sbjct: 239 ENGGGRKFFGEIELFNTDSLVKEVERVFDSNLPDPHELDKAKKLLKEHEQALIAAIARLT 298
Query: 396 DASDGESEQGEHQFS 410
DASD ES+ GE +S
Sbjct: 299 DASDYESD-GEEPYS 312
Score = 273 (101.2 bits), Expect = 1.8e-72, Sum P(2) = 1.8e-72
Identities = 61/118 (51%), Positives = 83/118 (70%)
Query: 49 DMATQIHSVEQDAYSSVLRAFKAQSDAITWEKESLITELRKELRVSDEEHRELLSKVNAD 108
+M QIH +EQ+AYS+VLRAF+AQ+D +W+K +++T LRKELR+SD+E+R+LL+ V+ D
Sbjct: 7 NMEAQIHILEQEAYSAVLRAFQAQADEFSWDKATVMTNLRKELRISDDENRQLLNNVHND 66
Query: 109 DIILRIREWRKASGLQPGMPSIPQPVHDPAPSPTVSASRKKTKTSQSVASL-STGAPS 165
D+I RIR+ R G Q + D PSPT SASRKK KT QS S+ ST + S
Sbjct: 67 DLIKRIRDSRPRGGNQV----VRHQSLDVHPSPTFSASRKKQKTFQSYPSIGSTRSKS 120
>TAIR|locus:2095868 [details] [associations]
symbol:AT3G57970 "AT3G57970" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL132977
InterPro:IPR005491 Pfam:PF03735 PROSITE:PS51138 InterPro:IPR014002
SMART:SM00743 IPI:IPI00535732 PIR:T46019 RefSeq:NP_191356.1
UniGene:At.53973 ProteinModelPortal:Q9M2Q1 SMR:Q9M2Q1
EnsemblPlants:AT3G57970.1 GeneID:824966 KEGG:ath:AT3G57970
TAIR:At3g57970 eggNOG:NOG316468 HOGENOM:HOG000153237 OMA:MPDEDEY
PhylomeDB:Q9M2Q1 ProtClustDB:CLSN2915436 Genevestigator:Q9M2Q1
Uniprot:Q9M2Q1
Length = 319
Score = 117 (46.2 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 23/65 (35%), Positives = 39/65 (60%)
Query: 228 LIGRKVWTRWPEDNHFYEAVITDYNPNEGRHALVYDINTAD--ETWEWVNLKEISPEDIK 285
L+GR+V + P+++ + E +IT Y+ N H L+ + D + WV+L+ + ED+K
Sbjct: 201 LVGRRVHIQMPDEDEYIEFLITKYDANTETHHLLSAFSNKDYEDPCNWVDLRHVQAEDMK 260
Query: 286 W-EGD 289
W EGD
Sbjct: 261 WPEGD 265
Score = 107 (42.7 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 24/73 (32%), Positives = 43/73 (58%)
Query: 49 DMATQIHSVEQDAYSSVLRAFKAQSDAITWEKESLITELRKELRVSDEEHRELLSKVNAD 108
D ++ ++ AY VL AFKA+S AI+ + ++ EL KEL++ + H+ + + AD
Sbjct: 43 DKKVKLSMLQDRAYYYVLHAFKAESPAISSSRIVIMQELLKELKIEYKTHQTYHNAIEAD 102
Query: 109 DIILRIREWRKAS 121
++L++R AS
Sbjct: 103 PMVLQLRNVSLAS 115
Score = 57 (25.1 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 28/136 (20%), Positives = 56/136 (41%)
Query: 35 SAVIGSASLPRMQNDMATQIHSVEQDAYSSVLRAFKAQSDAITWEKESLITELRKELRVS 94
S I S+ + MQ ++ ++ +E + + A +A + SL ++ ++ +++
Sbjct: 67 SPAISSSRIVIMQ-ELLKEL-KIEYKTHQTYHNAIEADPMVLQLRNVSLASDEKEMQKLT 124
Query: 95 DEEHRELLSKVNADDIILRIREWRKASGLQPGMPSIPQPVHDP---APSPTVSASRKKTK 151
E E+ V+ +I+RI+ + + P + D AP+ K +
Sbjct: 125 VAEEPEITG-VDGQPLIIRIKLNKDDNAKIQDRVLAPAKIKDGKVLAPAKIQDEEAKPSS 183
Query: 152 TSQSVASLSTGAPSPG 167
TS S G SPG
Sbjct: 184 TSDDSPDSSWGQVSPG 199
>TAIR|locus:2095858 [details] [associations]
symbol:AT3G57960 "AT3G57960" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL132977
InterPro:IPR005491 Pfam:PF03735 PROSITE:PS51138
ProtClustDB:CLSN2915436 IPI:IPI00533328 PIR:T46018
RefSeq:NP_191355.1 UniGene:At.53972 ProteinModelPortal:Q9M2Q2
EnsemblPlants:AT3G57960.1 GeneID:824965 KEGG:ath:AT3G57960
TAIR:At3g57960 eggNOG:NOG258229 HOGENOM:HOG000153238 OMA:WGIANET
PhylomeDB:Q9M2Q2 Genevestigator:Q9M2Q2 Uniprot:Q9M2Q2
Length = 223
Score = 108 (43.1 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 27/94 (28%), Positives = 48/94 (51%)
Query: 205 VANRGSSGAFPANGPSEA-ATYNP--LIGRKVWTRWPEDNHFYEAVITDYNPNEGRHALV 261
+ N + F P ++ + NP LIG+ V R P+ F E +I Y+ + H+L+
Sbjct: 114 LTNTATPSTFFVPKPVKSWGSVNPESLIGKWVSIRLPDKAKFTEYIIKAYDAEKEMHSLL 173
Query: 262 YDINTADET-----WEWVNLKEISPEDIKWEGDE 290
+ + E + W+++++ISP DI WEG +
Sbjct: 174 TETSNPMEVDCIDPFRWIDIRDISPNDIMWEGGQ 207
Score = 58 (25.5 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 11/79 (13%), Positives = 43/79 (54%)
Query: 53 QIHSVEQDAYSSVLRAFKAQSDAITWEKESLITELRKELRVSDEEHRELLSKVNADDIIL 112
++ ++++ A+ ++L+ F ++ ++ ++ +I +L E +++E H ++ +L
Sbjct: 37 KLQNLQRKAFYNLLQTFAFENSTMSNKRTEIIGKLMNEWGIANETHISFADQIQKK--LL 94
Query: 113 RIREWRKASGLQPGMPSIP 131
+++ + + + +P+ P
Sbjct: 95 TLKQTKHSGVKETQIPATP 113
>TAIR|locus:2147730 [details] [associations]
symbol:AT5G20030 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR008395 EMBL:CP002688 GenomeReviews:BA000015_GR
InterPro:IPR005491 Pfam:PF03735 PROSITE:PS51138 Pfam:PF05641
InterPro:IPR014002 SMART:SM00743 EMBL:AY085260 EMBL:BT003138
IPI:IPI00519084 RefSeq:NP_197503.1 UniGene:At.31229
ProteinModelPortal:Q8LES5 SMR:Q8LES5 IntAct:Q8LES5
EnsemblPlants:AT5G20030.1 GeneID:832125 KEGG:ath:AT5G20030
TAIR:At5g20030 eggNOG:NOG250730 HOGENOM:HOG000238892 OMA:HNDGTER
PhylomeDB:Q8LES5 ProtClustDB:CLSN2916685 Genevestigator:Q8LES5
Uniprot:Q8LES5
Length = 326
Score = 125 (49.1 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 26/67 (38%), Positives = 40/67 (59%)
Query: 43 LPRMQNDMATQIHSVEQDAYSSVLRAFKAQSDAITWEKESLITELRKELRVSDEEHRELL 102
+PR ++ A +H +E DAY S + A ITWE+E+ IT LR +L +S+EEH +
Sbjct: 255 VPRKGSE-AADVHRLELDAYRSSIERLHASGPIITWEQETWITNLRLKLNISNEEHLMQI 313
Query: 103 SKVNADD 109
+ +DD
Sbjct: 314 RNLISDD 320
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.310 0.128 0.376 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 443 401 0.00098 117 3 11 23 0.50 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 7
No. of states in DFA: 605 (64 KB)
Total size of DFA: 265 KB (2139 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 45.53u 0.12s 45.65t Elapsed: 00:00:02
Total cpu time: 45.53u 0.12s 45.65t Elapsed: 00:00:02
Start: Fri May 10 17:23:45 2013 End: Fri May 10 17:23:47 2013