Query 013412
Match_columns 443
No_of_seqs 247 out of 1601
Neff 7.2
Searched_HMMs 46136
Date Fri Mar 29 03:35:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013412.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013412hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0228 Beta-fructofuranosidas 100.0 9.9E-95 2.1E-99 727.1 28.4 395 23-421 18-415 (571)
2 COG1621 SacC Beta-fructosidase 100.0 2.2E-87 4.8E-92 691.1 37.1 355 49-435 23-391 (486)
3 TIGR01322 scrB_fam sucrose-6-p 100.0 1.4E-79 3E-84 641.8 39.6 342 50-431 9-371 (445)
4 smart00640 Glyco_32 Glycosyl h 100.0 2E-78 4.2E-83 631.5 41.7 355 59-435 1-371 (437)
5 PF00251 Glyco_hydro_32N: Glyc 100.0 2.6E-78 5.7E-83 604.1 27.2 299 59-377 1-308 (308)
6 cd08996 GH32_B_Fructosidase Gl 100.0 3E-69 6.5E-74 535.4 34.1 286 65-380 1-298 (298)
7 cd08995 GH32_Aec43_like Glycos 100.0 1.1E-56 2.3E-61 441.8 30.4 267 68-371 1-279 (280)
8 cd08979 GH_J Glycosyl hydrolas 100.0 1.5E-39 3.2E-44 317.2 27.3 243 69-343 8-264 (276)
9 cd08772 GH43_62_32_68 Glycosyl 100.0 1E-36 2.2E-41 297.6 27.2 269 68-365 1-286 (286)
10 cd08997 GH68 Glycosyl hydrolas 99.9 8.6E-26 1.9E-30 226.8 24.4 193 68-281 8-256 (349)
11 cd08994 GH43_like_2 Glycosyl h 99.9 4.5E-23 9.6E-28 204.1 20.6 190 58-256 4-282 (291)
12 cd08984 GH43_5 Glycosyl hydrol 99.8 1.5E-19 3.2E-24 179.6 20.8 161 68-256 80-246 (294)
13 cd09004 GH43_bXyl Glycosyl hyd 99.8 1.2E-19 2.6E-24 178.2 19.9 192 64-292 5-198 (275)
14 cd08993 GH43_DUF377 Glycosyl h 99.8 3.8E-19 8.1E-24 174.2 18.9 147 69-236 2-156 (268)
15 cd08999 GH43_ABN_2 Glycosyl hy 99.8 9.1E-18 2E-22 165.4 21.5 197 65-293 6-213 (287)
16 cd08990 GH43_AXH_like Glycosyl 99.7 1.4E-16 3E-21 156.5 20.3 195 69-291 2-206 (274)
17 cd08978 GH_F Glycosyl hydrolas 99.7 1.4E-15 3E-20 147.7 20.5 192 69-292 2-202 (271)
18 cd08991 GH43_bXyl_2 Glycosyl h 99.7 9.9E-15 2.1E-19 144.6 20.7 189 69-291 2-213 (294)
19 cd08992 GH43_like_1 Glycosyl h 99.6 2.8E-14 6E-19 143.8 18.8 177 54-239 23-247 (349)
20 cd08998 GH43_ABN_1 Glycosyl hy 99.6 7.2E-14 1.6E-18 138.2 20.1 190 67-293 1-207 (288)
21 cd08984 GH43_5 Glycosyl hydrol 99.6 9.3E-14 2E-18 138.0 19.3 170 67-256 11-193 (294)
22 cd08985 GH43_6 Glycosyl hydrol 99.5 1.5E-12 3.2E-17 127.7 23.7 190 68-292 4-203 (265)
23 cd09000 GH43_XYL_1 Glycosyl hy 99.4 6.5E-12 1.4E-16 124.3 20.0 178 65-281 6-196 (288)
24 cd08983 GH43_4 Glycosyl hydrol 99.4 3.3E-11 7.1E-16 118.9 22.1 183 64-280 15-206 (276)
25 cd09003 GH43_AXH_1 Glycosyl hy 99.4 1.6E-11 3.5E-16 123.1 20.1 186 65-281 7-215 (311)
26 PF04616 Glyco_hydro_43: Glyco 99.4 2.7E-11 5.8E-16 119.0 20.9 183 65-282 8-200 (286)
27 PF04041 DUF377: Domain of unk 99.4 4.3E-12 9.3E-17 127.2 13.0 159 72-249 36-201 (312)
28 cd08988 GH43_ABN Glycosyl hydr 99.3 9.9E-11 2.1E-15 115.5 20.0 180 68-281 1-193 (279)
29 cd08979 GH_J Glycosyl hydrolas 99.3 3.3E-11 7.1E-16 117.4 15.6 137 65-213 64-209 (276)
30 cd08981 GH43_2 Glycosyl hydrol 99.3 2.9E-10 6.3E-15 113.0 19.9 134 65-212 4-142 (291)
31 cd08992 GH43_like_1 Glycosyl h 99.2 5.1E-10 1.1E-14 113.1 18.6 169 69-256 114-310 (349)
32 cd08989 GH43_XYL Glycosyl hydr 99.2 1.6E-09 3.4E-14 106.5 19.2 174 65-282 6-190 (269)
33 cd08986 GH43_7 Glycosyl hydrol 99.1 2.7E-09 5.8E-14 104.8 17.6 179 66-281 1-202 (269)
34 cd09001 GH43_XYL_2 Glycosyl hy 99.1 3E-09 6.6E-14 104.4 17.4 169 65-281 9-191 (269)
35 cd08993 GH43_DUF377 Glycosyl h 99.1 2.5E-09 5.4E-14 104.8 15.0 98 131-237 3-104 (268)
36 cd08980 GH43_1 Glycosyl hydrol 99.1 1E-08 2.2E-13 101.5 19.2 188 69-292 2-205 (288)
37 cd09002 GH43_XYL_3 Glycosyl hy 99.0 8E-09 1.7E-13 102.1 16.9 122 66-213 14-135 (280)
38 cd08987 GH62 Glycosyl hydrolas 98.9 5.3E-08 1.1E-12 95.2 17.6 201 60-303 14-230 (303)
39 cd08982 GH43_3 Glycosyl hydrol 98.9 7.5E-08 1.6E-12 96.0 17.5 173 68-293 4-192 (295)
40 PF02435 Glyco_hydro_68: Levan 98.8 2.2E-07 4.8E-12 95.3 18.5 194 68-280 63-318 (428)
41 COG2152 Predicted glycosylase 98.8 8.8E-08 1.9E-12 93.5 12.3 147 72-239 35-193 (314)
42 cd08994 GH43_like_2 Glycosyl h 98.7 1.1E-07 2.4E-12 94.1 12.2 108 68-181 81-198 (291)
43 cd08995 GH32_Aec43_like Glycos 98.7 6.8E-07 1.5E-11 88.0 16.1 128 73-214 67-201 (280)
44 cd08983 GH43_4 Glycosyl hydrol 98.6 4.4E-07 9.6E-12 89.5 13.9 90 176-281 4-99 (276)
45 cd08999 GH43_ABN_2 Glycosyl hy 98.6 1.5E-06 3.3E-11 85.5 16.7 156 68-236 63-227 (287)
46 PF04041 DUF377: Domain of unk 98.6 7.1E-07 1.5E-11 89.6 13.7 104 125-237 29-135 (312)
47 cd08978 GH_F Glycosyl hydrolas 98.6 2E-06 4.3E-11 83.3 16.1 157 64-235 56-216 (271)
48 cd08990 GH43_AXH_like Glycosyl 98.6 5.8E-06 1.3E-10 81.2 18.9 151 66-238 63-220 (274)
49 cd08991 GH43_bXyl_2 Glycosyl h 98.5 8.4E-06 1.8E-10 80.7 20.0 153 67-234 55-227 (294)
50 cd08986 GH43_7 Glycosyl hydrol 98.5 1.3E-06 2.9E-11 85.8 12.7 121 192-337 2-147 (269)
51 cd08772 GH43_62_32_68 Glycosyl 98.5 6.7E-06 1.5E-10 80.0 16.2 155 67-234 60-224 (286)
52 cd08989 GH43_XYL Glycosyl hydr 98.4 5.4E-06 1.2E-10 81.4 13.3 78 178-281 1-87 (269)
53 cd09002 GH43_XYL_3 Glycosyl hy 98.3 1.2E-05 2.5E-10 79.6 14.5 78 177-281 7-84 (280)
54 cd08981 GH43_2 Glycosyl hydrol 98.3 9.6E-06 2.1E-10 80.7 13.9 78 190-282 4-88 (291)
55 cd08998 GH43_ABN_1 Glycosyl hy 98.2 4.9E-05 1.1E-09 75.2 16.2 153 65-232 56-217 (288)
56 cd08996 GH32_B_Fructosidase Gl 98.2 1.8E-05 3.9E-10 78.5 13.1 130 73-214 68-202 (298)
57 cd08997 GH68 Glycosyl hydrolas 98.0 0.00013 2.7E-09 74.2 14.5 149 76-233 80-284 (349)
58 cd09004 GH43_bXyl Glycosyl hyd 98.0 0.00043 9.4E-09 67.9 17.7 140 69-236 68-213 (275)
59 TIGR01322 scrB_fam sucrose-6-p 98.0 0.0001 2.2E-09 77.7 13.4 131 73-213 91-225 (445)
60 cd08985 GH43_6 Glycosyl hydrol 97.9 0.0011 2.4E-08 65.0 18.7 142 69-236 67-214 (265)
61 COG2152 Predicted glycosylase 97.8 0.00016 3.4E-09 71.1 11.3 103 127-238 30-139 (314)
62 PF04616 Glyco_hydro_43: Glyco 97.7 0.00033 7.2E-09 68.6 11.9 155 52-214 104-261 (286)
63 cd09003 GH43_AXH_1 Glycosyl hy 97.7 0.0027 5.8E-08 63.8 18.3 146 70-238 81-248 (311)
64 COG3507 XynB Beta-xylosidase [ 97.7 0.00071 1.5E-08 71.4 14.0 142 99-256 55-215 (549)
65 cd08988 GH43_ABN Glycosyl hydr 97.7 0.0017 3.7E-08 64.0 16.1 150 67-233 57-219 (279)
66 smart00640 Glyco_32 Glycosyl h 97.6 0.0004 8.6E-09 73.1 11.3 132 73-213 74-215 (437)
67 cd09001 GH43_XYL_2 Glycosyl hy 97.6 0.0023 5.1E-08 62.8 15.8 132 69-233 78-212 (269)
68 cd08980 GH43_1 Glycosyl hydrol 97.6 0.0034 7.4E-08 62.0 16.8 125 73-214 60-195 (288)
69 PF03664 Glyco_hydro_62: Glyco 97.4 0.012 2.6E-07 56.2 16.4 185 60-282 16-208 (271)
70 cd09000 GH43_XYL_1 Glycosyl hy 97.3 0.0084 1.8E-07 59.3 15.9 143 67-234 68-219 (288)
71 cd00260 Sialidase Sialidases o 97.2 0.017 3.6E-07 58.5 17.1 166 52-235 58-239 (351)
72 PF13088 BNR_2: BNR repeat-lik 97.2 0.0045 9.7E-08 60.2 11.8 148 67-234 48-199 (275)
73 cd08987 GH62 Glycosyl hydrolas 96.9 0.025 5.4E-07 55.9 14.3 142 69-234 80-230 (303)
74 cd08982 GH43_3 Glycosyl hydrol 96.7 0.023 4.9E-07 56.7 12.5 79 127-211 159-238 (295)
75 PF00251 Glyco_hydro_32N: Glyc 96.6 0.059 1.3E-06 54.0 14.5 117 131-256 12-138 (308)
76 PF13088 BNR_2: BNR repeat-lik 96.5 0.086 1.9E-06 51.2 15.2 161 78-256 1-168 (275)
77 cd00260 Sialidase Sialidases o 95.3 3 6.5E-05 42.1 20.6 147 96-256 45-207 (351)
78 PF13859 BNR_3: BNR repeat-lik 94.1 0.32 7E-06 48.9 9.7 141 75-238 67-216 (310)
79 PF02435 Glyco_hydro_68: Levan 89.3 11 0.00023 39.6 14.4 129 77-214 143-320 (428)
80 COG3507 XynB Beta-xylosidase [ 89.2 6.8 0.00015 42.1 13.1 148 64-229 88-243 (549)
81 COG3940 Predicted beta-xylosid 87.5 3.3 7.2E-05 39.2 8.4 104 73-182 137-247 (324)
82 PF13810 DUF4185: Domain of un 85.9 24 0.00052 35.6 14.4 156 66-234 93-272 (316)
83 PTZ00334 trans-sialidase; Prov 84.8 8.6 0.00019 43.3 11.4 125 93-236 215-351 (780)
84 COG1621 SacC Beta-fructosidase 84.3 13 0.00029 39.7 12.1 98 135-240 48-153 (486)
85 PF13810 DUF4185: Domain of un 74.5 15 0.00033 37.0 8.5 91 136-234 102-209 (316)
86 PF03664 Glyco_hydro_62: Glyco 73.2 95 0.0021 30.3 14.2 70 69-149 78-153 (271)
87 KOG0228 Beta-fructofuranosidas 64.2 44 0.00095 35.8 9.3 90 137-235 68-167 (571)
88 PF07172 GRP: Glycine rich pro 37.7 25 0.00054 29.0 2.2 13 9-21 1-13 (95)
89 PTZ00449 104 kDa microneme/rho 36.0 1.2E+02 0.0026 32.8 7.3 54 76-148 56-109 (943)
90 PF02012 BNR: BNR/Asp-box repe 30.6 41 0.0009 17.2 1.4 11 160-174 2-12 (12)
91 KOG0645 WD40 repeat protein [G 22.4 5.6E+02 0.012 25.6 8.7 48 114-164 66-117 (312)
92 smart00602 VPS10 VPS10 domain. 21.0 9.1E+02 0.02 26.6 11.3 30 349-378 382-411 (612)
No 1
>KOG0228 consensus Beta-fructofuranosidase (invertase) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.9e-95 Score=727.13 Aligned_cols=395 Identities=55% Similarity=0.950 Sum_probs=362.1
Q ss_pred hHhcCccccccccccCccccccccCCCCCCCcccceeeecCCCCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEE
Q 013412 23 LIANGAHQSEACYGTNQKLQSLQVSAPANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHS 102 (443)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rp~yH~~p~~gw~NDPnG~~y~~G~YHlFyQ~~P~~~~~g~~~~Wgha 102 (443)
++.++.-..++.....+.|++.+++...+.++||.|||+|++|||||| +|++|.|||||||||.+.+|| +.+||||
T Consensus 18 ~~~~~vk~~da~~~~~~~l~~~s~~~~~n~~~Rp~~HFqP~k~wMN~P---~~ykG~yHLFyQyNP~gavwg-~ivWGHa 93 (571)
T KOG0228|consen 18 NLTNYVKGLDAFHQNYAGLQSESPSNTVNQPDRPGFHFQPPKGWMNDP---MYYKGKYHLFYQYNPKGAVWG-NIVWGHA 93 (571)
T ss_pred hhhhhhhhhhhhhhhhhhhcccCccccccccCCceeecCCCcccccCc---cccCcEEEEEEecCCCCceee-eeEeeee
Confidence 333433344455555556655555578889999999999999999998 799999999999999999999 8999999
Q ss_pred EeCCCcccEeccCCCCCCCccCCCCeEeeeEEEcCCCeEEEEEccccCCCceeEEEEEecCCCCCCcceeEEecCCceEe
Q 013412 103 VSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMT 182 (443)
Q Consensus 103 ~S~Dlv~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~ 182 (443)
||+|||||+.+|+||.|++++|.+|||||||+++++|+++++|||.+.+.+|.|.+|+..|.+||.+++|.|.++||++.
T Consensus 94 vSkDLinW~~lp~Ai~Ps~~~ding~wSGSati~~~~~~vilytg~d~~~rqVqn~a~p~d~sdp~l~~w~k~~gnp~~~ 173 (571)
T KOG0228|consen 94 VSKDLINWEALPPAIAPSEWFDINGCWSGSATIDPNNSPVILYTGIDPNNRQVQNYAYPKDVSDPQLIAWSKDGGNPFMK 173 (571)
T ss_pred cchhhccccccCcccCCCCccccCccccceEEEccCCCeEEEecccCcCceEEEEEeccCCCCchhhheeecCCCceeec
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999998
Q ss_pred CC--CCCCCCCCCCCEEEeecCCCeEEEEEeeeeCCcceEEEEEeCCCCCcEEcccccccCCCCCeeeeCcEEEeccCCc
Q 013412 183 PP--NGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGT 260 (443)
Q Consensus 183 ~p--~~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~~~~~G~i~lY~S~Dl~~W~~~g~~l~~~~~~~~wECPdlf~l~~~g~ 260 (443)
++ .+++...||||+++|.+++|+|+|++|+..+++|.+.+|+|+|+++|+..+.|++++..++||||||||+++++|.
T Consensus 174 p~~V~~in~s~FRDPttaW~~~dgkWrm~vgsk~~q~g~a~~Y~S~Df~~W~k~~~~~h~~~~tgmwECPdffpVs~tg~ 253 (571)
T KOG0228|consen 174 PDKVLGINSSQFRDPTTAWFGQDGKWRMTVGSKIKQRGKAIIYSSDDFKHWTKSSVPLHSGDLTGMWECPDFFPVSITGT 253 (571)
T ss_pred cccccCCChhhccCCceeeecCCCcEEEEEEeecCccceEEEEeccchhhhhcccccccccCccceEECCCcEEecccCC
Confidence 77 6778889999999999999999999999988889999999999999999999999999999999999999999999
Q ss_pred cceeeccCCCceeeEEEEeeCCCceeEEEEEEEeCCCCeeccCCCCCCCCCceecccCCCcccceeecCCCCcEEEEEec
Q 013412 261 IGVDTSVLNPGVKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWA 340 (443)
Q Consensus 261 ~g~~~~~~~~~~k~vL~~s~~~~~~~~Y~vG~~d~~~~~F~p~~~~~~~~~~~~lD~G~fYA~qtf~d~~~grri~~gW~ 340 (443)
+|+..+..+...||||+.|..+++.++|+||+||+++.+|+|+..+.+.....+.|||.|||+|||.|..++|||+|||+
T Consensus 254 ~g~d~s~~~~~nkhvlkasl~gt~~d~Y~IG~yd~~~~~fvpd~~~~~~~~dlr~Dyg~~YASkTFfds~~~rrIlwgWa 333 (571)
T KOG0228|consen 254 DGLDWSLFGSINKHVLKASLGGTSNDQYFIGTYDGEKDTFVPDDGFSRVSVDLRYDYGKYYASKTFFDSVKGRRILWGWA 333 (571)
T ss_pred CCceEEEeccccccccccccCCceeEEEEEecccCCcceeeccCCcccccccccccchhhhhhhhhccccCCcEEEEEec
Confidence 99998776666699999999888999999999999888999998877655566899999999999999989999999999
Q ss_pred cCCCCCCCCCCCCccccccccEEEEEec-CCCEEEecchHHHHhhhcCceeccceEecCCcEEEecCCcceEEEEEEEEe
Q 013412 341 NESDSTQDDIDKGWSGVQTVPRAIWLDK-SGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQRLSSLTLL 419 (443)
Q Consensus 341 ~~~~~~~~~~~~gW~g~lslPR~l~l~~-dG~~L~q~Pv~el~~Lr~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~f~ 419 (443)
+|+++..+..++||+|.|+|||+++|+. .|+.|.|.|++|++.||...+...+..+..|...++.++.+.|+++|++|+
T Consensus 334 ~es~~~~dd~~kgw~g~qtipRki~Ld~~s~k~l~qwpv~eie~Lr~~~v~~~~~~~~~g~~~~v~~~t~~q~dvev~f~ 413 (571)
T KOG0228|consen 334 SESDYTNDDPTKGWRGLQTIPRKIWLDTESGKQLTQWPVEEIEPLRLSNVKMDNKLFKPGSLNEVSGITAAQADVEVTFE 413 (571)
T ss_pred ccCcccccchhcccccccccceEEEeeccCCCcccccchheeecccccccCccccccCCceeEEecccccccccceEEEE
Confidence 9999999999999999999999999998 788999999999999999998888888889999999999999999999988
Q ss_pred cc
Q 013412 420 GL 421 (443)
Q Consensus 420 ~~ 421 (443)
-.
T Consensus 414 ~~ 415 (571)
T KOG0228|consen 414 VE 415 (571)
T ss_pred ec
Confidence 54
No 2
>COG1621 SacC Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.2e-87 Score=691.13 Aligned_cols=355 Identities=35% Similarity=0.653 Sum_probs=299.2
Q ss_pred CCCCCcccceeeecCCCCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCccCCCCe
Q 013412 49 PANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSC 128 (443)
Q Consensus 49 ~~~~~~Rp~yH~~p~~gw~NDPnG~~y~~G~YHlFyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~aL~P~~~~D~~gv 128 (443)
....+|||.|||+|+.||||||||++|++|+|||||||+|+++.|| ++|||||+|+|||||+++|+||.|+..+|.+||
T Consensus 23 ~~~~~~Rp~yHftP~~G~mNDPNG~iy~~G~yHlFYQ~~P~~~~~g-~~~WgHa~S~Dlv~W~~~piaL~Pd~~~d~~g~ 101 (486)
T COG1621 23 VAKSPYRPQYHFTPPTGWLNDPNGLIYFDGKYHLFYQYNPFGAAHG-PKHWGHAVSKDLVHWEHLPIALAPDDDYDSHGC 101 (486)
T ss_pred ccCCCCCceeeecCCcCceECCCceeEECCEEEEEEecCCCCCCCC-CceeeeeccCCcccceECCceecCCCccccCCc
Confidence 3558999999999999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred EeeeEEEcCCCeEEEEEccccC----CCceeEEEEEecCCCCCCcceeEEecCCceEeCCCCCCCCCCCCCEEEeecCCC
Q 013412 129 WSGSVTILPGDKPFILYTGIDA----SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDG 204 (443)
Q Consensus 129 ~SGsav~~~dg~~~l~YTg~~~----~~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~~~g 204 (443)
||||||++ +|...+||||+.. .+.+.|++|+|+|+ .+|+|+.+|||+..|.++ +.+||||||+|+ +++
T Consensus 102 ySGSAV~~-~~~l~lfytg~v~~~~~~r~~~Q~iA~s~dg-----~~f~K~~~~~i~~~p~~~-t~hFRDPKv~w~-~~~ 173 (486)
T COG1621 102 YSGSAVVD-DGNLSLFYTGNVRDSNGIRQQTQCIAYSEDG-----GTFEKYSGNPIIDQPEGY-TPHFRDPKVVWD-EGG 173 (486)
T ss_pred eeeeEEEe-CCcEEEEEccceeccCCcceeEEEEEEEcCC-----CceEeccCCceecCCCcc-cccCCCCccccc-CCC
Confidence 99999985 8999999999865 36789999999996 589997678999888876 889999999898 688
Q ss_pred eEEEEEeeee-CCcceEEEEEeCCCCCcEEccccccc-CCCCCeeeeCcEEEeccCCccceeeccCCCceeeEEEEeeCC
Q 013412 205 RWRVLVGGQI-DNEGMAFVYWSWDFIHWTKLDHPLYS-VQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS 282 (443)
Q Consensus 205 ~~~Mv~ga~~-~~~G~i~lY~S~Dl~~W~~~g~~l~~-~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vL~~s~~~ 282 (443)
+|||++||+. +..|.|+||+|+||++|++.|++..+ +..++||||||||+|+.+ +.+ .+|++..+.++
T Consensus 174 ~~~~mlgAq~~~~~g~i~lY~S~DL~~W~~~g~~~~~~~~~gym~ECPdlf~l~~~--~~~--------~~~pqg~~~~~ 243 (486)
T COG1621 174 KWWMMLGAQGEDLKGTILLYESDDLKNWQFTGEFGLEQGGLGYMWECPDLFELDGE--DVL--------LFWPQGLSING 243 (486)
T ss_pred cEEEEEEEecCCCCceEEEEeCCCccCcEEEEeeccCCCceeeEEECCCeEEecCc--Cce--------EEcceeeecCC
Confidence 9999999987 45789999999999999999987665 445679999999999943 333 35565555532
Q ss_pred -----CceeEEEEEEEeCCCCeeccCCCCCCCCCceecccCC-CcccceeecCCCCcEEEEEeccCCCCC--CCCCCCCc
Q 013412 283 -----DKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDST--QDDIDKGW 354 (443)
Q Consensus 283 -----~~~~~Y~vG~~d~~~~~F~p~~~~~~~~~~~~lD~G~-fYA~qtf~d~~~grri~~gW~~~~~~~--~~~~~~gW 354 (443)
...+.|++|+||++ +|.+... .+++||+|+ |||+|||.++ ++|||++|||++|++. .|+...+|
T Consensus 244 ~~~~n~~~~~Y~vG~~dg~--~f~~~~~-----~~~~LD~G~DfYApQtf~~~-dgrri~igWmg~w~~~~~~PT~~~~w 315 (486)
T COG1621 244 GEYDNIYQSGYFVGDFDGK--EFKLDDG-----QFRELDFGFDFYAPQTFLDP-DGRRILIGWMGNWDYTNNYPTIDEGW 315 (486)
T ss_pred CcCCCcceeEEEEEeeccc--eeEecCC-----CceecccCccccceeeccCC-CCCEEEEEeccCccccCCCCccccCc
Confidence 46689999999997 5665542 367999999 9999999985 7999999999999987 56667799
Q ss_pred cccccccEEEEEecCCCEEEecchHHHHhhhcCceeccceEecCCcEEEecCCcceEEEEEEEEeccCCCceEEEEEeec
Q 013412 355 SGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQRLSSLTLLGLIHNNYAMIKMHQS 434 (443)
Q Consensus 355 ~g~lslPR~l~l~~dG~~L~q~Pv~el~~Lr~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 434 (443)
+|||||||||+|. +| +|+|+|++||++||..+..+.+..+.+...+++ ..+.+.++++.+... ....++|.++-+
T Consensus 316 ~~~mTlpRel~l~-~~-~L~Q~Pi~~l~~lr~~~~~~~~~~~~~~~~l~~--~~~~~~~l~~~~~~~-~~~~~~~~l~~~ 390 (486)
T COG1621 316 RGAMTLPRELTLE-DG-KLYQTPVRELESLRKPEEAAHNTTLSGNSKLEL--PSGDAYELDLDLIWT-DATSFGLELRMG 390 (486)
T ss_pred CccceeeEEEEEc-CC-eEEecchHHHHhhhcccccccccccccceeeec--cCCccEEEEEEeecc-ccceEEEEeecC
Confidence 9999999999995 67 699999999999999977677776665433333 334566667777765 555566777644
Q ss_pred C
Q 013412 435 K 435 (443)
Q Consensus 435 ~ 435 (443)
.
T Consensus 391 ~ 391 (486)
T COG1621 391 L 391 (486)
T ss_pred c
Confidence 3
No 3
>TIGR01322 scrB_fam sucrose-6-phosphate hydrolase.
Probab=100.00 E-value=1.4e-79 Score=641.76 Aligned_cols=342 Identities=32% Similarity=0.583 Sum_probs=283.5
Q ss_pred CCCCcccceeeecCCCCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCccCCCCeE
Q 013412 50 ANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCW 129 (443)
Q Consensus 50 ~~~~~Rp~yH~~p~~gw~NDPnG~~y~~G~YHlFyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~aL~P~~~~D~~gv~ 129 (443)
.+++|||+|||+|+.||||||||++|++|+||||||++|.++.|| +|+||||+|+|||||+++|+||.|++.+|+.|||
T Consensus 9 ~~~~~rp~~H~~p~~gw~nDPng~~~~~G~yHlfyq~~p~~~~~g-~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~G~~ 87 (445)
T TIGR01322 9 LQSEWRPTFHIQPQTGLLNDPNGLIYFKGEYHLFYQWFPFGPVHG-LKSWGHYTSKDLVHWEDEGVALAPDDPYDSHGCY 87 (445)
T ss_pred ccCCcCccCccCCCcCCccCCCcceEECCEEEEEEccCCCCCccC-ceEEEEEECCCccccEECCccCcCCCcccCCceE
Confidence 457899999999999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred eeeEEEcCCCeEEEEEccccC----CCceeEEEEEecCCCCCCcceeEEecCCceEeCCCCCCCCCCCCCEEEeecCCCe
Q 013412 130 SGSVTILPGDKPFILYTGIDA----SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGR 205 (443)
Q Consensus 130 SGsav~~~dg~~~l~YTg~~~----~~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~~~g~ 205 (443)
||||++ ++|+++|||||+.. ...+.|++|+|+|+ .+|+|.+ +|||.+++.....+||||+| |+ .+|+
T Consensus 88 sGsav~-~~g~~~l~YTg~~~~~~~~~~~~q~lA~S~Dg-----~~~~k~~-~pvi~~~~~~~~~~fRDP~V-~~-~~g~ 158 (445)
T TIGR01322 88 SGSAVD-NNGQLTLMYTGNVRDSDWNRESYQCLATMDDD-----GHFEKFG-IVVIELPPAGYTAHFRDPKV-WK-HNGH 158 (445)
T ss_pred ECeEEe-eCCEEEEEEeccccCCCCCeeEEEEEEEcCCC-----CeEEECC-CceEeCCCCCCcCcCCCCcE-Ee-ECCE
Confidence 999987 59999999999753 24578999999986 5899974 59997654444678999996 55 4689
Q ss_pred EEEEEeeee-CCcceEEEEEeCCCCCcEEcccccccC-----CCCCeeeeCcEEEeccCCccceeeccCCCceeeEEEEe
Q 013412 206 WRVLVGGQI-DNEGMAFVYWSWDFIHWTKLDHPLYSV-----QETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTS 279 (443)
Q Consensus 206 ~~Mv~ga~~-~~~G~i~lY~S~Dl~~W~~~g~~l~~~-----~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vL~~s 279 (443)
|||++|++. +..|++++|+|+||++|++.+.+.... ..+.||||||||+|+ | ||||++|
T Consensus 159 ~~M~~g~~~~~~~g~i~ly~S~Dl~~W~~~g~~~~~~~~~~~~~g~~~ECPdlf~l~--~-------------k~vL~~s 223 (445)
T TIGR01322 159 WYMVIGAQTETEKGSILLYRSKDLKNWTFVGEILGDGQNGLDDRGYMWECPDLFSLD--G-------------QDVLLFS 223 (445)
T ss_pred EEEEEEEecCCCceEEEEEECCCcccCeEecccccccccccCCccceEECCeEEEEC--C-------------cEEEEEe
Confidence 999999876 356899999999999999998654332 245699999999997 4 7888887
Q ss_pred eCCC----------ceeEEEEEEEeCCCCeeccCCCCCCCCCceecccCC-CcccceeecCCCCcEEEEEeccCCCCCCC
Q 013412 280 LFSD----------KHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDSTQD 348 (443)
Q Consensus 280 ~~~~----------~~~~Y~vG~~d~~~~~F~p~~~~~~~~~~~~lD~G~-fYA~qtf~d~~~grri~~gW~~~~~~~~~ 348 (443)
.++. ..++|++|+||.++.+|+|++. .+.+|+|+ |||+|+|.++ ++||||||||++|+...+
T Consensus 224 ~~g~~~~~~~~~~~~~~~Y~vG~~d~~~~~f~~~~~------~~~lD~G~dfYA~qtf~~~-~gr~i~~gW~~~~~~~~~ 296 (445)
T TIGR01322 224 PQGLDASGYDYQNIYQNGYIVGQLDYEAPEFTHGTE------FHELDYGFDFYAPQTFLAP-DGRRILVAWMGLPEIDYP 296 (445)
T ss_pred ccccCcccccccccccceeEEEEEECCCCEEecCCC------CceeccCcCceeeeeEECC-CCCEEEEEeCCCCccCCC
Confidence 6431 2367999999987789987643 46899998 9999999985 799999999999987767
Q ss_pred CCCCCccccccccEEEEEecCCCEEEecchHHHHhhhcCceeccceEecCCcEEEecCCcceEEEEEEEEeccCCCceEE
Q 013412 349 DIDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQRLSSLTLLGLIHNNYAM 428 (443)
Q Consensus 349 ~~~~gW~g~lslPR~l~l~~dG~~L~q~Pv~el~~Lr~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~f~~~~~~~~~~ 428 (443)
+.+.+|+|+|||||+|+|+ +| +|+|+|++||++||++... ... ......+.+. ..+++++++|+.. .+..++
T Consensus 297 ~~~~~W~g~lslpR~l~l~-~g-~L~~~Pv~el~~lr~~~~~---~~~-~~~~~~~~~~-~~~~~l~~~~~~~-~~~~~~ 368 (445)
T TIGR01322 297 TDRDGWAHCMTLPRELTLK-DG-KLVQTPLRELKALRTEEHI---NVF-GDQEHTLPGL-NGEFELILDLEKD-SAFELG 368 (445)
T ss_pred CccCCcccccccCEEEEEe-CC-eEEEEEhHHHHHHhcCccc---ccc-ccccccccCC-CceEEEEEEecCC-CccEEE
Confidence 7778999999999999996 67 6999999999999987542 011 1111123333 2467888888764 567788
Q ss_pred EEE
Q 013412 429 IKM 431 (443)
Q Consensus 429 ~~~ 431 (443)
|++
T Consensus 369 l~~ 371 (445)
T TIGR01322 369 LAL 371 (445)
T ss_pred EEE
Confidence 888
No 4
>smart00640 Glyco_32 Glycosyl hydrolases family 32.
Probab=100.00 E-value=2e-78 Score=631.51 Aligned_cols=355 Identities=42% Similarity=0.783 Sum_probs=284.7
Q ss_pred eeecCCCCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCccCCCCeEeeeEEEcCC
Q 013412 59 HFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPG 138 (443)
Q Consensus 59 H~~p~~gw~NDPnG~~y~~G~YHlFyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~aL~P~~~~D~~gv~SGsav~~~d 138 (443)
||+|+.||||||||++|++|+||||||++|.++.|| +++||||+|+|||||+++++||.|+..+|+.|||||||+++ +
T Consensus 1 H~~p~~gw~NDPnGl~~~~G~yHlFyq~~p~~~~~g-~~~Wgha~S~Dlv~W~~~~~aL~P~~~~d~~g~~sGsav~~-~ 78 (437)
T smart00640 1 HFQPPKGWMNDPNGLIYYKGKYHLFYQYNPFGPVWG-NIHWGHAVSKDLVHWTHLPVALAPDEWYDSNGVFSGSAVID-P 78 (437)
T ss_pred CCCCCcCccCCCCeeeEECCEEEEEEecCCCCCCCC-CeEEEEEEcCCcceeeecCcccCCCCcCCCCcEEEEEEEEC-C
Confidence 999999999999999999999999999999999999 99999999999999999999999999999999999999985 7
Q ss_pred CeEEEEEccccCC------CceeE-EEEEecCCCCCCcceeEEecCCceEeCCCCCCCCCCCCCEEEeecCCCeEEEEEe
Q 013412 139 DKPFILYTGIDAS------GQQVQ-NLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVG 211 (443)
Q Consensus 139 g~~~l~YTg~~~~------~~~~q-~lA~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~~~g~~~Mv~g 211 (443)
|++++||||+... ..+.| ++|.++|+ ++|+|+++|||+.++++....+||||+|+|+ ++++|||++|
T Consensus 79 ~~~~~~YTg~~~~~~~~~~~~~~~~~~ass~d~-----~~w~k~~~~Pvi~~~p~~~~~~fRDP~Vf~~-~~~~~~m~~g 152 (437)
T smart00640 79 GNLSLLYTGNVAIDTNVQVQRQAQQLAASDDLG-----GTWTKYPGNPVLVPPPGIGTEHFRDPKVFWY-DGDKWYMVIG 152 (437)
T ss_pred CceEEEEcCCcccccccCcccEEEEEEEECCCC-----CeeEECCCCcEEeCCCCCCCCCcCCCCccEE-CCCEEEEEEE
Confidence 7899999997421 12333 45555554 8999987799998766666789999998776 4479999999
Q ss_pred eee-CCcceEEEEEeCCCCCcEEccccccc--CCCCCeeeeCcEEEeccCCccceeeccCCCceeeEEEEeeCCCceeEE
Q 013412 212 GQI-DNEGMAFVYWSWDFIHWTKLDHPLYS--VQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYY 288 (443)
Q Consensus 212 a~~-~~~G~i~lY~S~Dl~~W~~~g~~l~~--~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vL~~s~~~~~~~~Y 288 (443)
++. +.+|++++|+|+||++|++.+.++.. ...+.||||||||+|+.+| .+.||||++|.++...+.|
T Consensus 153 ~~~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~g~~wECPdlf~l~~~~----------~~~~~vLi~s~~g~~~~~y 222 (437)
T smart00640 153 ASDEDKTGIALLYRSTDLKNWTLLGELLHSGVGDTGGMWECPDLFPLPGDG----------DTSKHVLKVSPQGGSGNYY 222 (437)
T ss_pred EEecCCCeEEEEEECCCcccCeECCcccccCCCCccceEECCcEEEeCCCC----------CceeEEEEECcCCCCccEE
Confidence 876 45799999999999999999875543 2345899999999998544 2369999999987778899
Q ss_pred EEEEEeCCCCeeccCCCCCCCCCceecccCC-CcccceeecCCCCcEEEEEeccCCCC-CCCCCCCCccccccccEEEEE
Q 013412 289 VLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDS-TQDDIDKGWSGVQTVPRAIWL 366 (443)
Q Consensus 289 ~vG~~d~~~~~F~p~~~~~~~~~~~~lD~G~-fYA~qtf~d~~~grri~~gW~~~~~~-~~~~~~~gW~g~lslPR~l~l 366 (443)
++|+++++ .+|+|+.... ....++||+|+ |||+|+|.++..+||||||||++++. ....+..+|+|+|||||+|+|
T Consensus 223 ~~G~~~g~-~~f~~~~~~~-~~~~~~lD~G~dfYA~qt~~~~~~~r~i~~gW~~~~~~~~~~~p~~~W~g~~tlPRel~l 300 (437)
T smart00640 223 FVGYFDGS-DQFTPDDPED-VGIGLRLDYGFDFYASQTFYDPDGNRRILIGWMGEWDSYADDVPTKGWAGALSLPRELTL 300 (437)
T ss_pred EEEEEcCc-eeEeECCccc-cCccceEecCCCceeeeeeecCCCCcEEEEEecCCCccccccCCCCCccccceeCeEEEE
Confidence 99999873 4798875421 12345899998 99999999875569999999999974 222333899999999999999
Q ss_pred e-cCCCEEEecchHHHHhhhcCceeccceEecCCcEEEe--cCCcceEEEEEEEEeccCC-CceEEEEEeecC
Q 013412 367 D-KSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEV--SGITASQRLSSLTLLGLIH-NNYAMIKMHQSK 435 (443)
Q Consensus 367 ~-~dG~~L~q~Pv~el~~Lr~~~~~~~~~~l~~~~~~~l--~~~~~~~~~~~~~f~~~~~-~~~~~~~~~~~~ 435 (443)
+ ++| +|+|+|++||++||... ......+..+....+ ....+.+++++++|..... +..++|++++++
T Consensus 301 ~~~~g-~L~~~Pv~el~~lr~~~-~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~l~~~~~~ 371 (437)
T smart00640 301 DKTGG-KLLQWPVEELESLRNVK-ELSNLTLKPGSVNELLGLTASGDAYEIELSFEVDSGGAGPFGLLVLASE 371 (437)
T ss_pred EecCC-EEEEeecHHHHhhhCcc-cccceeecCCceeeeecccCCccEEEEEEEEEeCCCcceeEEEEEEeCC
Confidence 5 567 69999999999999542 233334433332222 2234567889999877543 367999998753
No 5
>PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure []. ; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A ....
Probab=100.00 E-value=2.6e-78 Score=604.08 Aligned_cols=299 Identities=43% Similarity=0.843 Sum_probs=248.3
Q ss_pred eeecCCCCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCccCCCCeEeeeEEEcCC
Q 013412 59 HFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPG 138 (443)
Q Consensus 59 H~~p~~gw~NDPnG~~y~~G~YHlFyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~aL~P~~~~D~~gv~SGsav~~~d 138 (443)
||+|+.||||||||++|++|+||||||+||+++.|| +++||||+|+|||||+++++||.|++.+|++|||||||+++ +
T Consensus 1 H~~p~~gw~NDPnG~~~~~G~yHlFyQ~~P~~~~~g-~~~WgHa~S~Dlv~W~~~~~aL~P~~~~d~~g~~SGs~~~~-~ 78 (308)
T PF00251_consen 1 HFTPPKGWMNDPNGLVYYDGKYHLFYQYNPFGPEWG-NMHWGHATSKDLVHWEHLPVALPPDEEYDADGCFSGSAVVD-D 78 (308)
T ss_dssp SBB-SSEEEEEEEEEEEETTEEEEEEEEETTSSSS--SBEEEEEEESSSSSEEEEEEEE-SSSGGGTTEEEEEEEEEE-T
T ss_pred CCCCCCCCeECCccCeEeCCEEEEEeccCCCCcccc-eeEEEEEECCCCCCceeCCceEcccccCCcCccCcceEEEE-C
Confidence 999999999999999999999999999999999999 99999999999999999999999999999999999999986 6
Q ss_pred CeEEEEEccccCCCceeEEEEEecCCCCCCcceeEEec-CCceEeC-CCCCCCCCCCCCEEEeecCCCeEEEEEeeeeCC
Q 013412 139 DKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFS-GNPVMTP-PNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN 216 (443)
Q Consensus 139 g~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~-~nPvi~~-p~~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~~~~ 216 (443)
+++++||||+.....|.|++|+|+|.+ ++|+|++ +||||.. |++ ...+||||+|+|++ +++|+|++|++...
T Consensus 79 ~~~~~~YTg~~~~~~~~q~~A~s~d~~----~~w~k~~~~~pvi~~~p~~-~~~~~RDP~v~~~~-~~~~~m~~g~~~~~ 152 (308)
T PF00251_consen 79 DNLVLFYTGNNRDGKQVQCLAYSTDDG----ITWTKYPQGNPVIPEPPPG-DTTDFRDPKVFWRE-DGRWYMLLGAGRDG 152 (308)
T ss_dssp TCEEEEEEEEETTTEEEEEEEEESSTT----SSEEE-TTTCESBESSSTT-SCTSEEEEEEEEEC-TTEEEEEEEEEETT
T ss_pred CEEEEEEeccCCCCCeEEEEEEECCCC----CceEEcCCCCcEEEecccC-CCCccccCeEEEec-CCEEEEEEeccccC
Confidence 699999999987568999999996654 8999987 4999975 444 68899999988885 69999999999888
Q ss_pred cceEEEEEeCCCCCcEEcccccccCC-CCCeeeeCcEEEeccCCccceeeccCCCceeeEEEEee----CCCceeEEEEE
Q 013412 217 EGMAFVYWSWDFIHWTKLDHPLYSVQ-ETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSL----FSDKHDYYVLG 291 (443)
Q Consensus 217 ~G~i~lY~S~Dl~~W~~~g~~l~~~~-~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vL~~s~----~~~~~~~Y~vG 291 (443)
.|++++|+|+||++|++.+.+..... .+.||||||||+|+..|.. ....+|||++|. .....+.|++|
T Consensus 153 ~g~i~~y~S~Dl~~W~~~~~l~~~~~~~g~~~ECPdlf~l~~~~~~-------~~~~~~vl~~s~~g~~~~~~~~~Y~vG 225 (308)
T PF00251_consen 153 RGCILLYTSDDLIHWEYLGPLFIPGDNGGGMWECPDLFPLDGKGDG-------TGKWVWVLIFSPQGIEDNGHGTYYMVG 225 (308)
T ss_dssp EEEEEEEEESSSSSEEEEEEESEEETTTSSEEEEEEEEEEEBTTSS-------SEEEEEEEEEEEESTTTTTTEEEEEEE
T ss_pred cceEEEEEcCCcccCceeCcccccccccccccccceEEEECCcccc-------cceEEEEEEecccccccccccceEEeE
Confidence 89999999999999999987554432 4789999999999955210 012367899998 35678999999
Q ss_pred EEeCCCCeeccCCCCCCCCCceecccCC-CcccceeecCCCCcEEEEEeccCCCCCC-CCCCCCccccccccEEEEEecC
Q 013412 292 TYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDSTQ-DDIDKGWSGVQTVPRAIWLDKS 369 (443)
Q Consensus 292 ~~d~~~~~F~p~~~~~~~~~~~~lD~G~-fYA~qtf~d~~~grri~~gW~~~~~~~~-~~~~~gW~g~lslPR~l~l~~d 369 (443)
+||.++++|+++.. ..+++|+|+ |||+|+|.++.++|||+||||++++... ...+.+|+|+|||||||+|+++
T Consensus 226 ~~d~~~~~f~~~~~-----~~~~lD~G~dfYA~qtf~~~~~~r~i~~gW~~~~~~~~~~~~~~gW~g~lslPR~l~l~~~ 300 (308)
T PF00251_consen 226 DFDFDGGTFTPDDS-----SFQRLDYGFDFYAPQTFYDPDGGRRILIGWMGEWDYNADDYPTYGWAGCLSLPRELTLKDE 300 (308)
T ss_dssp EEETTTTEEEESST-----TSEESBSSSS-EEEEEEEETTTTEEEEEEEES-TTTHHHHCHGHTEE-EE---EEEEEETT
T ss_pred EecCCCCeeeeecc-----ccceeccCccccCCchhcCCCcCcEEEEEEecCCCcccccCCCCCCccEEEeCEEEEEEEC
Confidence 99877789987621 367999999 9999999997556999999999998742 2336899999999999999754
Q ss_pred CCEEEecc
Q 013412 370 GKQLVQWP 377 (443)
Q Consensus 370 G~~L~q~P 377 (443)
+.+|+|+|
T Consensus 301 ~~~L~q~P 308 (308)
T PF00251_consen 301 GGRLYQKP 308 (308)
T ss_dssp SSSEEEEE
T ss_pred CCeEEEcC
Confidence 44799998
No 6
>cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases. Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal
Probab=100.00 E-value=3e-69 Score=535.38 Aligned_cols=286 Identities=40% Similarity=0.776 Sum_probs=246.1
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCccCCCCeEeeeEEEcCCCeEEEE
Q 013412 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFIL 144 (443)
Q Consensus 65 gw~NDPnG~~y~~G~YHlFyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~ 144 (443)
||||||||++|++|+||||||++|.++.|+ +++||||+|+|||||+++++||.|+..+|..|||||||+++.+|+++||
T Consensus 1 gw~nDPng~~~~~G~yhlfyq~~p~~~~~~-~~~wgha~S~Dlv~W~~~~~al~p~~~~d~~g~~sGsav~~~~g~~~~~ 79 (298)
T cd08996 1 GWMNDPNGLVYFNGKYHLFYQYNPFGPVWG-NMHWGHATSKDLVHWEHLPVALAPDDPYDSGGCFSGSAVVDDNGKLVLF 79 (298)
T ss_pred CCcccCCeeeEECCEEEEEEcCCCCCCCCC-CcEEEEEEecCccceeECCcccCCCCcccCCeEEeCeEEEcCCCcEEEE
Confidence 899999999999999999999999999999 9999999999999999999999998888999999999998644999999
Q ss_pred EccccC---CCceeEEEEEecCCCCCCcceeEEecCCceEeCCCCCCCCCCCCCEEEeecCCCeEEEEEeeeeC-CcceE
Q 013412 145 YTGIDA---SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID-NEGMA 220 (443)
Q Consensus 145 YTg~~~---~~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~~~-~~G~i 220 (443)
|||+.. ...+.|++|+|+|.+ ++|+|...+|++.+ +.....+||||+|++. +|+|+|++|++.. ..|++
T Consensus 80 YTg~~~~~~~~~~~~~lA~S~ddg----~~w~k~~~~~~~~~-~~~~~~~~RDP~V~~~--~g~~~m~~g~~~~~~~~~i 152 (298)
T cd08996 80 YTGNVKLDGGRRQTQCLAYSTDDG----RTFTKYEGNPVIPP-PDGYTTHFRDPKVFWH--DGKWYMVLGAGTEDGTGRI 152 (298)
T ss_pred EeceeCCCCCceEEEEEEEEcCCC----CEEEECCCCceEcC-CCCCCCcccCCeEEeE--CCEEEEEEEEEecCCCcEE
Confidence 999864 467899999998532 89999988888863 3345679999997655 4899999999863 56899
Q ss_pred EEEEeCCCCCcEEccccc-ccCCCCCeeeeCcEEEeccCCccceeeccCCCceeeEEEEeeCCC------ceeEEEEEEE
Q 013412 221 FVYWSWDFIHWTKLDHPL-YSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSD------KHDYYVLGTY 293 (443)
Q Consensus 221 ~lY~S~Dl~~W~~~g~~l-~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vL~~s~~~~------~~~~Y~vG~~ 293 (443)
.+|+|+||++|++.+.+. .....+.|||||+||+|+++ .||||++|.+.. ..+.|++|++
T Consensus 153 ~ly~S~Dl~~W~~~~~~~~~~~~~~~~~EcP~l~~l~~~-------------~k~vL~~s~~~~~~~~~~~~~~y~~G~~ 219 (298)
T cd08996 153 LLYRSDDLKNWEYLGELLTSLGDFGYMWECPDLFPLDVE-------------GKWVLIFSPQGLEPEGNGSGTGYLVGDF 219 (298)
T ss_pred EEEECCCCCCCEEcceecccCCCccceEeCCcEEEECCC-------------CeEEEEECCCCCCCCCCccceEEEEEEE
Confidence 999999999999987542 33445679999999999842 399999998643 4679999999
Q ss_pred eCCCCeeccCCCCCCCCCceecccCC-CcccceeecCCCCcEEEEEeccCCCCCCCCCCCCccccccccEEEEEecCCCE
Q 013412 294 DPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDKSGKQ 372 (443)
Q Consensus 294 d~~~~~F~p~~~~~~~~~~~~lD~G~-fYA~qtf~d~~~grri~~gW~~~~~~~~~~~~~gW~g~lslPR~l~l~~dG~~ 372 (443)
++. .|+++. ...+++|+|+ |||+|+|.++ ++|+|+||||++++...+..+.+|+|+|||||+|+|++++ +
T Consensus 220 ~~~--~~~~~~-----~~~~~lD~G~dfYA~q~~~~~-~~r~i~~gW~~~~~~~~~~~~~~w~g~ls~pr~l~l~~~~-~ 290 (298)
T cd08996 220 DGT--TFTFDH-----TEFGELDYGFDFYAPQTFVDP-DGRRILIGWMGNWDYEYPTPEDGWAGCLTLPRELSLKDGG-R 290 (298)
T ss_pred ECC--CCeEec-----CCceEecCCCCeEeCceeeCC-CCCEEEEEEecCCCcCCCCCCCCceeeeEeCEEEEEccCC-E
Confidence 986 565541 1257899998 9999999986 7999999999999987778899999999999999998765 7
Q ss_pred EEecchHH
Q 013412 373 LVQWPVEE 380 (443)
Q Consensus 373 L~q~Pv~e 380 (443)
|.|+|++|
T Consensus 291 l~~~P~~e 298 (298)
T cd08996 291 LYQRPVRE 298 (298)
T ss_pred EEEEeCCC
Confidence 99999976
No 7
>cd08995 GH32_Aec43_like Glycosyl hydrolase family 32. This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a
Probab=100.00 E-value=1.1e-56 Score=441.80 Aligned_cols=267 Identities=25% Similarity=0.446 Sum_probs=222.1
Q ss_pred cCCCcceEECCEEEEEEEECCCCCCC--CCCceEEEEEeCCCcccEeccCCCCC-CCccCCCCeEeeeEEEcCCCeEEEE
Q 013412 68 NDPNGPMYYKGVYHLFYQYNPLGPLF--GDKMIWAHSVSYDLINWIHLSHALCP-SGPYDINSCWSGSVTILPGDKPFIL 144 (443)
Q Consensus 68 NDPnG~~y~~G~YHlFyQ~~P~~~~~--g~~~~Wgha~S~Dlv~W~~~~~aL~P-~~~~D~~gv~SGsav~~~dg~~~l~ 144 (443)
.||. ++|++|+||||||++|.+..| + +++||||+|+||+||+++++||.| +..+|..|||||||++ .+|+++||
T Consensus 1 ~d~~-~~~~~G~yhlfyq~~p~~~~~~~~-~~~wgha~S~Dlv~W~~~~~al~~~~~~~d~~g~~sgs~~~-~~g~~~l~ 77 (280)
T cd08995 1 GDPM-PFYDDGTFHIFYLHDPRNGPPEGL-RHPWSLLTTKDLVNYEDHGEAIPRGGDEDDDDAIGTGSVIK-GEGTYHAF 77 (280)
T ss_pred CCcc-ceEECCEEEEEEEcCCCCCCcccC-CceEEEEEccCcCccEECcceecCCCCcccccCceEeEEEe-eCCEEEEE
Confidence 4887 999999999999999999888 7 899999999999999999999988 4567889999999987 48999999
Q ss_pred EccccCC--CceeEEEEEecCCCCCCcceeEEecCCceEeCCCCCCCCCCCCCEEEeecCCCeEEEEEeeee-----CCc
Q 013412 145 YTGIDAS--GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI-----DNE 217 (443)
Q Consensus 145 YTg~~~~--~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~~-----~~~ 217 (443)
|||+... ..+.|++|+|+|+ ++|+|.+.+||+..+.++...+||||+|++.+.+|+|+|++|++. +..
T Consensus 78 YTg~~~~~~~~~~i~~A~S~D~-----~~w~k~~~~pv~~~~~~~~~~~~rDP~Vf~~~~~g~y~m~~g~~~~~~~~~~~ 152 (280)
T cd08995 78 YTGHNLDGKPKQVVMHATSDDL-----ITWTKDPEFILIADGEGYEKNDWRDPFVFWNEEEGCYWMLLATRLLDGPYNRR 152 (280)
T ss_pred EEEECCCCCCcEEEEEEECCCC-----CccEECCCCeecCCccccccCCccCCcEEEcCCCCeEEEEEEeccCCCCCCCC
Confidence 9997642 5678999999986 799998778988745455557899999766645799999999875 356
Q ss_pred ceEEEEEeCCCCCcEEcccccccCCCCCeeeeCcEEEeccCCccceeeccCCCceeeEEEEeeCC-CceeEEEEEEEeCC
Q 013412 218 GMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS-DKHDYYVLGTYDPQ 296 (443)
Q Consensus 218 G~i~lY~S~Dl~~W~~~g~~l~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vL~~s~~~-~~~~~Y~vG~~d~~ 296 (443)
|++.+|+|+||++|++.+. +.....+.|||||++|+++ | +|+|++|.+. .....|++|+..
T Consensus 153 g~i~~~~S~Dl~~W~~~~~-~~~~~~~~~~E~P~l~~~~--g-------------~~~L~~s~~~~~~~~~Y~~~~~~-- 214 (280)
T cd08995 153 GCIALFTSKDLKNWEYEEP-FYAPGLYFMPECPDLFKMG--D-------------WWYLVYSEFSENRKTHYRVSKSP-- 214 (280)
T ss_pred eEEEEEEeCCcCcceecCc-eecCCCcceeecceEEEEC--C-------------EEEEEEEeccCCCcEEEEEeCCC--
Confidence 8999999999999999874 4444456799999999997 4 8999998753 356789999632
Q ss_pred CCeeccCCCCCCCCCceecccCC-CcccceeecCCCCcEEEEEeccCCCCCCCCCCCCccccccccEEEEEecCCC
Q 013412 297 MDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDKSGK 371 (443)
Q Consensus 297 ~~~F~p~~~~~~~~~~~~lD~G~-fYA~qtf~d~~~grri~~gW~~~~~~~~~~~~~gW~g~lslPR~l~l~~dG~ 371 (443)
.+.|.... ...|| |+ |||+|+|.++ +||||||||++++...++.+.+|+|+|| ||+|.+.+||.
T Consensus 215 ~g~~~~~~-------~~~~d-g~dfYA~~~~~~~--~r~i~~gw~~~~~~~~~~~~~~w~~~l~-~~~~~~~~~g~ 279 (280)
T cd08995 215 FGPWRAPD-------DDTFD-GRAFYAAKTASDG--TRRFLFGWVPTKAGNDDDGNWEWGGNLV-VHELIQNEDGT 279 (280)
T ss_pred CCCeEcCC-------cCccC-cccccceeEEEeC--CeEEEEEEecCCCCcccccCCccceEEE-eeEEEECCCCc
Confidence 23554322 23589 98 9999999985 8999999999999877888899999999 68888888883
No 8
>cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J. This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta
Probab=100.00 E-value=1.5e-39 Score=317.20 Aligned_cols=243 Identities=28% Similarity=0.388 Sum_probs=192.7
Q ss_pred CCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCC--CCCCccCCCCeEeeeEEEcCCCeEEEEEc
Q 013412 69 DPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHAL--CPSGPYDINSCWSGSVTILPGDKPFILYT 146 (443)
Q Consensus 69 DPnG~~y~~G~YHlFyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~aL--~P~~~~D~~gv~SGsav~~~dg~~~l~YT 146 (443)
||+.+. |+||||||++|.+..|+...+|+||+|+||+||++.+.+| .|...+|..+||+|+++...+|+++||||
T Consensus 8 ~~~~~~---g~yhlfy~~~~~~~~~~~~~~~~~a~S~D~~~w~~~~~~l~~~~~~~~~~~~~~~p~v~~~~dg~~~~~Yt 84 (276)
T cd08979 8 NPAVVV---GKYHLFYLAAPRGGGDGNTSRIGAASSDDGTWWTRPPAPLPPGPPGSFDDGGVWTPSVVRDPDGTYRMFYT 84 (276)
T ss_pred CCceEe---eeEEEEEEccCcCcCCCCcceeEEEEcCCCCccEECCcCccCCCCCchhcCCeEcceEEEcCCCeEEEEEe
Confidence 555444 8999999999998776535678999999999999999888 56678889999999999864499999999
Q ss_pred cccC--CCceeEEEEEecCCCCCCcceeEEecCCceE-----eCCCCCCCCCCCCCEEEeecCCCeEEEEEeeee-CCcc
Q 013412 147 GIDA--SGQQVQNLAMPENLSDPLLKDWVKFSGNPVM-----TPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI-DNEG 218 (443)
Q Consensus 147 g~~~--~~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi-----~~p~~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~~-~~~G 218 (443)
+... ...+.+++|+|+|+ .+|+|.+.+|++ ..+......++|||+|++.+.+|+|+|++++.. +..+
T Consensus 85 ~~~~~~~~~~~i~~A~S~D~-----~~w~~~~~~~~~~~~~~~~~~~~~~~~~~dP~v~~~~~~g~y~m~~~~~~~~~~~ 159 (276)
T cd08979 85 GYDRPKGAVQRIGLATSKDL-----IHWTKHGPNPVPRWYESGNPGPWDDHAWRDPAVVRDEEGGGWRMYYGARDADERG 159 (276)
T ss_pred cccCCCCCcceEEEEECCCC-----CceEECCCCcceeeeecCCCCCcccccccccEEEEECCCCEEEEEEEeEccCCCc
Confidence 9863 46788999999986 799998766653 222233456899999766533389999999875 3457
Q ss_pred eEEEEEeCCCCCcEEcccc--cccCCCCCeeeeCcEEEeccCCccceeeccCCCceeeEEEEeeCC-CceeEEEEEEEeC
Q 013412 219 MAFVYWSWDFIHWTKLDHP--LYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS-DKHDYYVLGTYDP 295 (443)
Q Consensus 219 ~i~lY~S~Dl~~W~~~g~~--l~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vL~~s~~~-~~~~~Y~vG~~d~ 295 (443)
++.+|+|+|+++|++.+.+ ........++|||++|+++ | +|+|+++... .....|.+|.++.
T Consensus 160 ~i~~a~S~D~~~W~~~~~~~~~~~~~~~~~~e~P~~~~~~--g-------------~~~l~~~~~~~~~~~~y~vg~~~~ 224 (276)
T cd08979 160 AIGLATSPDLIHWTPVPPPPGPRTGYDDGQLEVPQVVKID--G-------------RWYLLYSGRNEDAKTGYRVGTALF 224 (276)
T ss_pred EEEEEECCCCCcceECCCCCCCCCcccCCcCccceEEEEC--C-------------EEEEEEEecCccCCccEEEEeccc
Confidence 8999999999999998754 2223345799999999997 4 8999988764 5577899999876
Q ss_pred CCCeeccCCCCCCCCCceecccCC-CcccceeecCCCCcEEEEEeccCC
Q 013412 296 QMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANES 343 (443)
Q Consensus 296 ~~~~F~p~~~~~~~~~~~~lD~G~-fYA~qtf~d~~~grri~~gW~~~~ 343 (443)
. .|+|.. ...+|.|. |||+|++.+..++|++++|||+++
T Consensus 225 ~--~~~~~~-------~~~~~~g~~~ya~~~~~~~~~~~~~~~gw~~~~ 264 (276)
T cd08979 225 G--PGRPLT-------LAELLDRTDLYAARPVPDGEGGGVVLEGFVQFG 264 (276)
T ss_pred C--Cccccc-------cccccCCCCceeEEeccccCCCcEEEEEEeecc
Confidence 4 555542 34789998 999999987546999999999987
No 9
>cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68. Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32
Probab=100.00 E-value=1e-36 Score=297.57 Aligned_cols=269 Identities=28% Similarity=0.445 Sum_probs=205.0
Q ss_pred cCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCC----CCCccCCCCeEeeeEEEcCCCeEEE
Q 013412 68 NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALC----PSGPYDINSCWSGSVTILPGDKPFI 143 (443)
Q Consensus 68 NDPnG~~y~~G~YHlFyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~aL~----P~~~~D~~gv~SGsav~~~dg~~~l 143 (443)
|||+ +++++|+||||||++|.+ + .++|+|++|+||+||++++.+|. |....+..++|+|+++...+|+++|
T Consensus 1 ~DP~-i~~~~g~yyl~~~~~~~~---~-~~~~~~~~S~Dl~~W~~~~~~~~~~~~~~~~~~~~~~wap~v~~~~~g~~~l 75 (286)
T cd08772 1 ADPN-LIKYNGTYYIFFSGDDKN---G-NPGIAHATSKDLVNWTDHPVALVWWARRGGPKDSGGIWAPSIVYIENGKFYL 75 (286)
T ss_pred CCCe-EEEECCEEEEEEEccCCC---C-CceEEEEECCCcCcceECCccchhhcccCCCCCCCcEecceEEEcCCCCEEE
Confidence 7999 999999999999999865 4 78999999999999999998884 6677788899999999864499999
Q ss_pred EEccccC-CCceeEEEEEecCCCCCCcceeEEecCCceEeC-CCCCCCCCCCCCEEEeecCCCeEEEEEeeeeC-CcceE
Q 013412 144 LYTGIDA-SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTP-PNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID-NEGMA 220 (443)
Q Consensus 144 ~YTg~~~-~~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~-p~~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~~~-~~G~i 220 (443)
|||+... ...+.+++|+|+|+. ..|++...+||+.. +.......+|||+|+ .+++|+|||++++... ..+.|
T Consensus 76 ~yt~~~~~~~~~~i~~a~s~d~~----~~~~~~~~~~~~~~~~~~~~~~~~~Dp~v~-~d~dG~~y~~~~~~~~~~~~~i 150 (286)
T cd08772 76 YYTDVSFTKNQQTIGVATAEDGN----GPWTDYIGGPVLPDNPPAADVSNFRDPFVF-EDDDGKWYLVFGSGDHHNFGGI 150 (286)
T ss_pred EEEeecCCCCceeEEEEEcCCCC----CCCccccccccccCCCCccccccccCCeEE-EcCCCCEEEEEccccCCCCCeE
Confidence 9999753 356889999999874 35666544566532 222345689999965 5466999999988642 35678
Q ss_pred EEEEeCCCCCcEEcccc--cccCCCCCeeeeCcEEEeccCCccceeeccCCCceeeEEEEeeCC------CceeEEEEEE
Q 013412 221 FVYWSWDFIHWTKLDHP--LYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS------DKHDYYVLGT 292 (443)
Q Consensus 221 ~lY~S~Dl~~W~~~g~~--l~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vL~~s~~~------~~~~~Y~vG~ 292 (443)
.+++|+|+.+|+..+.. ........++|||++|+++ | +|+|++|... .....|++++
T Consensus 151 ~~~~s~d~~~w~~~~~~~~~~~~~~~~~~E~P~~~~~~--g-------------~~yL~~s~~~~~~~~~~y~~~~~~~~ 215 (286)
T cd08772 151 FLYESDDDTTWKKGSAELLISEGEGGKQIEGPGLLKKN--G-------------KYYLFYSINGTGRVDSTYSIGYARSE 215 (286)
T ss_pred EEEEcCCCCCcccccceeeEeeccCCCceeccEEEEEC--C-------------EEEEEEEcCCCcCCCCCcceEEEEcc
Confidence 99999999999877643 2233356799999999997 4 8899988754 3455677776
Q ss_pred EeCCCCeeccCCCCC-CCCCceecccCC-CcccceeecCCCCcEEEEEeccCCCCCCCCCCCCccccccccEEEE
Q 013412 293 YDPQMDIFSPDTDFH-GNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIW 365 (443)
Q Consensus 293 ~d~~~~~F~p~~~~~-~~~~~~~lD~G~-fYA~qtf~d~~~grri~~gW~~~~~~~~~~~~~gW~g~lslPR~l~ 365 (443)
.+. +.|++..... ........|.+. +||++.|.++ ++|++|++|+.+++.... ...+|+++|+|||+++
T Consensus 216 ~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~r~~~ 286 (286)
T cd08772 216 SDT--GPYVPKSDTSGGLSLTGGNDGGVGPYHAAAFNDA-GGRVVLVYHAYNVQYADA-PTYGWGRSLAIPRLLW 286 (286)
T ss_pred CCC--CCcccCCCCCCccccccccCCCCCCCccEEEECC-CCCEEEEEEeccCCcccc-ccCCCccccccccccC
Confidence 533 4666443110 001123467777 9999999986 799999999999875433 5679999999999874
No 10
>cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase. Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n
Probab=99.95 E-value=8.6e-26 Score=226.85 Aligned_cols=193 Identities=21% Similarity=0.213 Sum_probs=136.6
Q ss_pred cCCCcceE-ECCEEEEEEEECCCC----CCCCCCceEEEEEeCCCcccEeccCCCCCCCccCCCCeEeeeEEEcCCCeEE
Q 013412 68 NDPNGPMY-YKGVYHLFYQYNPLG----PLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPF 142 (443)
Q Consensus 68 NDPnG~~y-~~G~YHlFyQ~~P~~----~~~g~~~~Wgha~S~Dlv~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~ 142 (443)
-|..|-+. ++|..-+|+...|.. +.|+ .+||+|++|+||++|++.+ +|.|++.+|..|||||||++..||+++
T Consensus 8 ~d~~g~~~~~~G~~~vfaL~a~~~~~~~~rh~-~~~wgh~~S~dlv~W~~~~-~l~p~~~~d~~g~wSGsa~~~~dg~~~ 85 (349)
T cd08997 8 QDRDGEVASYNGYEVIFALTADRNLDPDDRHG-DARIGYFYSRAGGNWIDGG-KVFPDGLSPGSREWSGSATLDDDGTVQ 85 (349)
T ss_pred ECCCCCEEEECCEEEEEEEecCCCCCCCCCcC-ceEEEEEEeCCCCcccCCC-ccCCCCcccCCCeEcceEEEeCCCeEE
Confidence 46666444 677644899877654 4677 9999999999999999955 567888999999999999986679999
Q ss_pred EEEccccC----CCceeEEEEEecCCCCCCcceeEEec--CCceEeCCC--------------CCCCCCCCCCEEEeecC
Q 013412 143 ILYTGIDA----SGQQVQNLAMPENLSDPLLKDWVKFS--GNPVMTPPN--------------GVKDDMFRDPTTAWQAP 202 (443)
Q Consensus 143 l~YTg~~~----~~~~~q~lA~s~D~~d~~l~~w~k~~--~nPvi~~p~--------------~~~~~~fRDP~Vvw~~~ 202 (443)
|||||+.+ .....|++|.+.+.. +..|.+.. ..+++.++. .....+||||+|+..++
T Consensus 86 lfYTg~~~~~~~~~~~~Q~ia~a~~~~---~~v~~~~~~~~~~lf~~Dg~~Yqt~~q~~~~~~~~~~~~fRDP~vf~d~~ 162 (349)
T cd08997 86 LFYTAVGRKGEPQPTFTQRLALARGTL---SVVNLSGFEDHHELFEPDGDLYQTDQQYEGTGAQGDIKAFRDPFVFEDPE 162 (349)
T ss_pred EEEeccccCCCCCCCceEEEEEEECCC---cceEecccCccceeeeCCCceEEeccccccccccCccCcccCCEEEecCC
Confidence 99999853 245667777665431 12233211 123443211 12356899999655444
Q ss_pred CCeEEEEEeeeeC-C---------------------------cceEEEE--EeCCCCCcEEcccccccCC-CCCeeeeCc
Q 013412 203 DGRWRVLVGGQID-N---------------------------EGMAFVY--WSWDFIHWTKLDHPLYSVQ-ETGMWECPD 251 (443)
Q Consensus 203 ~g~~~Mv~ga~~~-~---------------------------~G~i~lY--~S~Dl~~W~~~g~~l~~~~-~~~~wECPd 251 (443)
+|+|||+++++.. . .|+|.+. +|+|+.+|++.+. |.+.. -...||||+
T Consensus 163 ~G~~ymvfeant~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~G~IGia~~~s~dl~~W~~~~P-L~~a~~v~d~~E~P~ 241 (349)
T cd08997 163 TGKTYLLFEGNTAGERGSQECTEAELGRVLPDTVKPDGASYQNGNVGIAVAKNDDLTEWKLLPP-LLEANGVNDELERPH 241 (349)
T ss_pred CCcEEEEEEeccCCCCCccccccccccccccccccccccccccceEEEEEecCCCCCCcEEcCc-cccCCCcCCceEcce
Confidence 7999999988752 2 2555555 6789999999874 44332 245799999
Q ss_pred EEEeccCCccceeeccCCCceeeEEEEeeC
Q 013412 252 IFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (443)
Q Consensus 252 lf~l~~~g~~g~~~~~~~~~~k~vL~~s~~ 281 (443)
+|+++ | ||+|++|..
T Consensus 242 v~~~~--g-------------k~yL~~s~~ 256 (349)
T cd08997 242 VVFHN--G-------------KYYLFTISH 256 (349)
T ss_pred EEEEC--C-------------EEEEEEeCC
Confidence 99997 5 888888853
No 11
>cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins. This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f
Probab=99.91 E-value=4.5e-23 Score=204.05 Aligned_cols=190 Identities=20% Similarity=0.309 Sum_probs=140.8
Q ss_pred eeeecCCCCccCCCcceEE-CCEEEEEEEECCCCCC---CCCCceEEEEEeCCCc-ccEeccCCCCCC--CccCCCCeEe
Q 013412 58 YHFRPPQNWINDPNGPMYY-KGVYHLFYQYNPLGPL---FGDKMIWAHSVSYDLI-NWIHLSHALCPS--GPYDINSCWS 130 (443)
Q Consensus 58 yH~~p~~gw~NDPnG~~y~-~G~YHlFyQ~~P~~~~---~g~~~~Wgha~S~Dlv-~W~~~~~aL~P~--~~~D~~gv~S 130 (443)
.+|+.+..++-+|. ++.. +|+||||||..|.+.. |-....|+||+|+|+. +|+..+++|.|+ ..+|..++++
T Consensus 4 ~~~~~~~~~~w~~~-vi~~~~g~y~lfy~~~~~~~~~~~~~~~~~i~~A~S~~~~g~w~~~g~vl~~~~~~~wd~~~~~~ 82 (291)
T cd08994 4 SGLEDEDYSVWGGS-IIKGPDGKYHLFASRWPEGLGFHGWLPYSEIVHAVSDTPEGPYTFQEVVLPGRGGGYWDARTTHN 82 (291)
T ss_pred ceeeeCCeEEEecc-eEECCCCcEEEEEEEccCCCCCCcccccceEEEEEcCCCCCCcEEeeeEcCCCCCCcccCCCccC
Confidence 46778888888998 7775 5899999999887543 2113569999999987 899999999887 5688999999
Q ss_pred eeEEEcCCCeEEEEEccccC-------CCceeEEEEEecCCCCCCcceeEEecCCceEeCC------------------C
Q 013412 131 GSVTILPGDKPFILYTGIDA-------SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPP------------------N 185 (443)
Q Consensus 131 Gsav~~~dg~~~l~YTg~~~-------~~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p------------------~ 185 (443)
++++.. +|+++||||+... ...+.+++|+|++.. ..|++. .+||+.+. .
T Consensus 83 P~vi~~-~g~yyl~Y~~~~~~~~~~~~~~~~~ig~a~s~~~~----g~w~~~-~~pvl~~~~~~~~~~~~~~p~v~~~~~ 156 (291)
T cd08994 83 PTIKRF-DGKYYLYYIGNTDPGPRPGHRNNQRIGVAVSDSLD----GPWKRS-DQPILEPRPGGWDNLITSNPAVTRRPD 156 (291)
T ss_pred CeEEEE-CCEEEEEEEcccCCcccccCCCCceEEEEEeCCCC----CCcEEC-CCceecCCCCccccccccCCCeEEeCC
Confidence 999874 8999999999753 235677888887642 356654 24444210 0
Q ss_pred -------------------------------------------CCCCCCCCCCEEEeecCCCeEEEEEeeeeC----Ccc
Q 013412 186 -------------------------------------------GVKDDMFRDPTTAWQAPDGRWRVLVGGQID----NEG 218 (443)
Q Consensus 186 -------------------------------------------~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~~~----~~G 218 (443)
.....++|||+ ||+ .+|+|||+++++.+ ..+
T Consensus 157 g~~~m~y~g~~~~~~~~~~~~gla~s~d~~g~~~~~~~~~v~~~~~~~~~~dP~-V~~-~~g~yym~~~~~~~~~~~~~~ 234 (291)
T cd08994 157 GSYLLVYKGGTYNPTKGNRKYGVAIADSPTGPYTKVSGPPFIEPGDNGNTEDPF-VWY-DKGQFHMIVKDMLGYVTGEKG 234 (291)
T ss_pred CCEEEEEeccccCCCCCcEEEEEEEeCCCCCCCEECCCCccccCCCCCceeCce-EEE-eCCEEEEEEeecccCcCCCCc
Confidence 00124579999 566 46999999998753 467
Q ss_pred eEEEEEeCCCCCcEEccccccc-----C----CCCCeeeeCcEE-Eec
Q 013412 219 MAFVYWSWDFIHWTKLDHPLYS-----V----QETGMWECPDIF-PVS 256 (443)
Q Consensus 219 ~i~lY~S~Dl~~W~~~g~~l~~-----~----~~~~~wECPdlf-~l~ 256 (443)
.+.+|+|+|+++|++.+.+... . ....|||||++| ..+
T Consensus 235 ~i~~a~S~Dg~~W~~~~~~~~~~~~~~~~~~~~~~~~~erP~v~~~~~ 282 (291)
T cd08994 235 GGAYFRSKDGIHWKLAPGLAYSTTVEWTDGTTEDWGRLERPQVLLDED 282 (291)
T ss_pred eEEEEECCCCCCceecCcceeeeeEEcCCCcccccccccCCEEEEcCC
Confidence 8999999999999998755311 1 136799999999 776
No 12
>cd08984 GH43_5 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.84 E-value=1.5e-19 Score=179.60 Aligned_cols=161 Identities=21% Similarity=0.311 Sum_probs=123.5
Q ss_pred cCCCcceEECCEEEEEEEECCCCC--CCCCCceEEEEEeCCCcccEeccCCCCCCCccCCCCeEeeeEEEcCCCeEEEEE
Q 013412 68 NDPNGPMYYKGVYHLFYQYNPLGP--LFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILY 145 (443)
Q Consensus 68 NDPnG~~y~~G~YHlFyQ~~P~~~--~~g~~~~Wgha~S~Dlv~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~Y 145 (443)
-+|. +++++|+||||||++|..+ .++ .++|+||+|+||++|++.++++. +..++++++++.+.+|+++|+|
T Consensus 80 WAP~-v~~~~G~y~myys~~~~~~~~~~~-~~~i~~a~S~Dl~~w~~~~~~~~-----~~~~~iD~~vf~~~dg~~yl~y 152 (294)
T cd08984 80 WAPE-VVWHGGVYHMYVTYIPGVPPDWGG-PRRIVHYTSPNLWDWTFVGRVDL-----DSDRVIDACVFKLPDGRWRMWY 152 (294)
T ss_pred eCce-EEEECCEEEEEEEecCCCCcccCC-CcEEEEEECCCcCcceECCcccc-----CCCCcEEeEEEEeCCCEEEEEE
Confidence 4677 8899999999999998653 234 78999999999999999887632 2357899999887679999999
Q ss_pred ccccCCCceeEEEEEecCCCCCCcceeEEecCCceEeCCCCCCCCCCCCCEEEeecCCCeEEEEEeeeeCCcceEEEEEe
Q 013412 146 TGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWS 225 (443)
Q Consensus 146 Tg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~~~~~G~i~lY~S 225 (443)
|+.. ..+.+++|.|+|+ .+|++. .+++.. ...++|+| |+ .+|+|||+++.. .| +.+|+|
T Consensus 153 ~~~~--~~~~~~~a~s~D~-----~~w~~~--~~~i~~------~~~EgP~v-~k-~~g~yym~~~~~---~g-~~~~~S 211 (294)
T cd08984 153 KDER--RGSTTYAADSEDL-----YHWTVE--GPVLGD------RPHEGPNV-FR-WKGYYWMIIDEW---KG-LGVYRS 211 (294)
T ss_pred ECCC--CCeEEEEEECCCC-----CEEEeC--CccccC------CCCCCCCe-eE-ECCEEEEEEcCC---ce-EEEEEC
Confidence 9753 3455689999886 799985 356542 23489995 45 478999998542 34 679999
Q ss_pred CCCCCcEEcccccccC----CCCCeeeeCcEEEec
Q 013412 226 WDFIHWTKLDHPLYSV----QETGMWECPDIFPVS 256 (443)
Q Consensus 226 ~Dl~~W~~~g~~l~~~----~~~~~wECPdlf~l~ 256 (443)
+|+.+|++.+.++... ....+.+||++++.+
T Consensus 212 ~D~~~W~~~~~~l~~~~~~~~~~~~~~H~~i~~~~ 246 (294)
T cd08984 212 KDAENWERQGGILLKPGTRPDDGAKGRHADVVVTG 246 (294)
T ss_pred CChhhcEECCeeeccCCCCccccccccCCcEEEeC
Confidence 9999999998766532 124478999999876
No 13
>cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.84 E-value=1.2e-19 Score=178.17 Aligned_cols=192 Identities=19% Similarity=0.243 Sum_probs=139.8
Q ss_pred CCCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCC-CccCCCCeEeeeEEEcCCCeEE
Q 013412 64 QNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPS-GPYDINSCWSGSVTILPGDKPF 142 (443)
Q Consensus 64 ~gw~NDPnG~~y~~G~YHlFyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~aL~P~-~~~D~~gv~SGsav~~~dg~~~ 142 (443)
.||++||+ +++++|+||||++....+. . ...|.+++|+||+||++++.+|.+. ..++..++|+++++. .+|+++
T Consensus 5 ~g~~~DP~-i~~~~g~yY~~~t~~~~~~--~-~~~~~~~~S~Dl~~W~~~g~~l~~~~~~~~~~~~wAP~v~~-~~g~yy 79 (275)
T cd09004 5 PGWYADPE-IRIFGGTYYIYPTSDGAGG--E-QTPFDVFSSKDLVNWTKEGIILDMADVSWANRAAWAPSVIE-RNGKYY 79 (275)
T ss_pred CCCCCCCC-eEEECCEEEEEEeccCCCC--C-eeEEEEEECCCCCCceECcccccccCCcccCCCcCCCeEEE-ECCEEE
Confidence 46899999 6788999999998765321 2 4679999999999999999998764 455677899999987 489999
Q ss_pred EEEccccCCCceeEEEEEecCCCCCCcceeEEecCCceEeCCCCCCCCCCCCCEEEeecCCCeEEEEEeeeeCCcceEEE
Q 013412 143 ILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFV 222 (443)
Q Consensus 143 l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~~~~~G~i~l 222 (443)
||||+. +.+++|+|+|.. -.|++..++|++.... .....+||.| |.+.+|++||++++. +.+.+
T Consensus 80 ~yys~~-----~~i~va~s~~p~----gp~~~~~~~p~~~~~~--~~~~~iDp~v-f~d~dG~~yl~~~~~----~~~~i 143 (275)
T cd09004 80 FYFSAN-----GGIGVAVADSPL----GPFKDALGKPLIDKFT--FGAQPIDPDV-FIDDDGQAYLYWGGW----GHCNV 143 (275)
T ss_pred EEEEcC-----CcEEEEEeCCCC----CCCCCCCCCccccCCc--CCCCccCCCe-EECCCCCEEEEEcCc----CCEEE
Confidence 999985 457899998864 3577644578875432 2357899995 454789999999874 12233
Q ss_pred E-EeCCCCCcEEcccccccCCCCCeeeeCcEEEeccCCccceeeccCCCceeeEEEEeeCCCceeEEEEEE
Q 013412 223 Y-WSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLGT 292 (443)
Q Consensus 223 Y-~S~Dl~~W~~~g~~l~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vL~~s~~~~~~~~Y~vG~ 292 (443)
. -|+|+.+|+.....+ ......+.|||.+|+.+ | +++|++|........|.+|-
T Consensus 144 ~~l~~d~~~~~~~~~~~-~~~~~~~~EgP~i~k~~--G-------------~yyl~ys~~~~~~~~Y~~~y 198 (275)
T cd09004 144 AKLNEDMISFDGERDGS-EITPKNYFEGPFMFKRN--G-------------IYYLMWSEGGWTDPDYHVAY 198 (275)
T ss_pred EEECCCcccccCcceee-eccCCCceecceEEEEC--C-------------EEEEEEECCCCCCCCceEEE
Confidence 3 478898887543322 11234589999999986 5 78888887543323455553
No 14
>cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function. This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.82 E-value=3.8e-19 Score=174.21 Aligned_cols=147 Identities=16% Similarity=0.262 Sum_probs=114.5
Q ss_pred CCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEecc-CCCCC--CCccCCCCeEeeeEEEcCCCeEEEEE
Q 013412 69 DPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLS-HALCP--SGPYDINSCWSGSVTILPGDKPFILY 145 (443)
Q Consensus 69 DPnG~~y~~G~YHlFyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~-~aL~P--~~~~D~~gv~SGsav~~~dg~~~l~Y 145 (443)
|| |+++++|+||||||.++.. + .++||||+|+|++||++.+ +.|.| +..++..+|++++++. .+|+++|+|
T Consensus 2 nP-~v~~~~G~y~l~y~~~~~~---~-~~~ig~A~S~Dg~~~~~~~~~~i~p~~~~~~~~~gv~dP~v~~-~~g~y~m~Y 75 (268)
T cd08993 2 NP-AVVYDNGEFYLLYRAAGND---G-VIRLGLARSRDGLHFEIDPDPPVWPPPEDGFEEGGVEDPRIVK-IDDTYYITY 75 (268)
T ss_pred cC-eEEEECCEEEEEEEEECCC---C-ceEEEEEEECCCceEEECCcceEcCCCCCcccccCccCcEEEE-ECCEEEEEE
Confidence 55 4889999999999987643 3 6899999999999999875 34666 5677889999999987 599999999
Q ss_pred ccccC-CCceeEEEEEecCCCCCCcceeEEecCCceEeCCCCCCCCCCCCCEEEeec-CCCeEEEEEeeee---CCcceE
Q 013412 146 TGIDA-SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQA-PDGRWRVLVGGQI---DNEGMA 220 (443)
Q Consensus 146 Tg~~~-~~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~-~~g~~~Mv~ga~~---~~~G~i 220 (443)
|+... ...+++++|+|+|+ .+|+|.. .+ +. + ..||+. +|.+ .+|+|+|++.... +..+.|
T Consensus 76 ta~~~~~~~~~i~lA~S~D~-----~~W~~~~-~~-~~-~------~~~d~~-~~p~~~~g~y~m~~r~~~~~~~~~~~I 140 (268)
T cd08993 76 AARPNAPNGTRIGLATTKDF-----ITFERLG-TS-LV-P------NNRDGI-LFPEKINGKYVMLHRPFEYGGTSPPDM 140 (268)
T ss_pred EccCCCCCCcEEEEEEeCCc-----ceEEEec-cc-CC-C------CCCCEE-EeeEEECCEEEEEEccccCCCCCCCcE
Confidence 99763 35678999999986 7999973 21 21 1 237887 4432 4899999996442 245688
Q ss_pred EEEEeCCCCCcEEccc
Q 013412 221 FVYWSWDFIHWTKLDH 236 (443)
Q Consensus 221 ~lY~S~Dl~~W~~~g~ 236 (443)
.+++|+||.+|+..+.
T Consensus 141 ~lA~S~Dl~~W~~~~~ 156 (268)
T cd08993 141 WLSFSPDLVHWGNHRF 156 (268)
T ss_pred EEEECCCcCccCCCeE
Confidence 9999999999997654
No 15
>cd08999 GH43_ABN_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=99.79 E-value=9.1e-18 Score=165.39 Aligned_cols=197 Identities=20% Similarity=0.219 Sum_probs=136.7
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCc-cCCCCeEeeeEEEcCCCeEEE
Q 013412 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGP-YDINSCWSGSVTILPGDKPFI 143 (443)
Q Consensus 65 gw~NDPnG~~y~~G~YHlFyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~aL~P~~~-~D~~gv~SGsav~~~dg~~~l 143 (443)
+.+-||. +++++|+|+||+.... ..+|.+++|+||+||+..+.+|.+... .+..++|.+.++. .+|+++|
T Consensus 6 ~~~~DP~-i~~~~g~yy~~~t~~~-------~~~i~~~~S~Dl~~W~~~g~~l~~~~~~~~~~~~waP~v~~-~~g~y~~ 76 (287)
T cd08999 6 GDFPDPS-VIRVDGTYYAYATNGN-------GPNVPIATSTDLVNWTYLGDAFPKLPRWWTGGDFWAPDVSY-VNGKYVL 76 (287)
T ss_pred CCCCCCe-EEEECCEEEEEEeCCC-------CCcEEEEECCCCCCcEECCcccCCCCCcccCCCccCceEEE-ECCEEEE
Confidence 4567998 8888999999997543 257999999999999999988877654 4456788888876 4899999
Q ss_pred EEccccC-CCceeEEEEEecCCCCCCcceeEEecCCceEeCCCCCCCCCCCCCEEEeecCCCeEEEEEeeeeCCcc---e
Q 013412 144 LYTGIDA-SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEG---M 219 (443)
Q Consensus 144 ~YTg~~~-~~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~~~~~G---~ 219 (443)
+|++... ...+.+++|+|+|.. ..|++.. .+++..+. .....+||.| +.+++|++||++++.....+ .
T Consensus 77 ~y~~~~~~~~~~~i~~a~s~~p~----g~~~~~~-~~~~~~~~--~~~~~~Dp~v-~~d~dG~~Yl~~~~~~~~~~~~~~ 148 (287)
T cd08999 77 YYSARDKGSGGQCIGVATADSPL----GPFTDHG-KPPLCCPE--GEGGAIDPSF-FTDTDGKRYLVWKSDGNSIGKPTP 148 (287)
T ss_pred EEEeecCCCCCEEEEEEECCCCC----CCCccCC-cceEecCC--CCCCccCCCe-EECCCCCEEEEEeccCCCCCCCce
Confidence 9999764 245677899988763 3688754 33433222 2356799995 45468999999987543211 1
Q ss_pred EEEE-EeCCCCCcEEccccccc---CCCCCeeeeCcEEEeccCCccceeeccCCCceeeEEEEeeCCCce--eEEEEEEE
Q 013412 220 AFVY-WSWDFIHWTKLDHPLYS---VQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKH--DYYVLGTY 293 (443)
Q Consensus 220 i~lY-~S~Dl~~W~~~g~~l~~---~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vL~~s~~~~~~--~~Y~vG~~ 293 (443)
+.+. .|+|+.+|......+.. .....++|||.+|+.+ | +|+|++|...... ..|.+|-.
T Consensus 149 i~~~~ls~d~~~~~~~~~~i~~~~~~~~~~~~EgP~i~k~~--g-------------~yyl~~S~~~~~~~~~~y~i~~~ 213 (287)
T cd08999 149 IYLQELSADGLTLTGEPVRLLRNDEDWEGPLVEAPYLVKRG--G-------------YYYLFYSAGGCCSGASTYAVGVA 213 (287)
T ss_pred EEEEEeCCCCccccCCcEeeecccccccCCceEeeEEEEEC--C-------------EEEEEEEcCCccCCCCCEEEEEE
Confidence 3333 36899888644322211 1234589999999986 5 8889888743222 24666643
No 16
>cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of
Probab=99.74 E-value=1.4e-16 Score=156.54 Aligned_cols=195 Identities=17% Similarity=0.239 Sum_probs=138.6
Q ss_pred CCCcceEECCEEEEEEEECCCCCC---CCCCceEEEEEeCCCcccEeccCCCCCCC--ccCCCCeEeeeEEEcCCCeEEE
Q 013412 69 DPNGPMYYKGVYHLFYQYNPLGPL---FGDKMIWAHSVSYDLINWIHLSHALCPSG--PYDINSCWSGSVTILPGDKPFI 143 (443)
Q Consensus 69 DPnG~~y~~G~YHlFyQ~~P~~~~---~g~~~~Wgha~S~Dlv~W~~~~~aL~P~~--~~D~~gv~SGsav~~~dg~~~l 143 (443)
||. +++++|+|+||.......+. +. ...|..++|+||+||+..+.+|.+.. .++..++|.++++. .+|+++|
T Consensus 2 DP~-~~~~~~~yy~~~t~~~~~~~~~~~~-~~~~~v~~S~Dl~~W~~~g~~l~~~~~~~~~~~~~wAP~i~~-~~g~yy~ 78 (274)
T cd08990 2 DPA-AHVFNGRVYIYTSHDEAGGGGDDFC-MNDYHVFSSPDLVNWTDHGVILSVTDFPAWAKGQAWAPDVVE-KNGKYYL 78 (274)
T ss_pred CCC-cEEECCEEEEEeCCCCCCCCCCccc-cceEEEEECCCCCCcEECcccccCCCCCccccCCcCcCeEEE-ECCEEEE
Confidence 888 78889999999987654332 22 34599999999999999999987543 26678999999886 5999999
Q ss_pred EEccccCCCceeEEEEEecCCCCCCcceeEEecCCceEeCCCCCCCCCCCCCEEEeecCCCeEEEEEeeeeCCcceEEEE
Q 013412 144 LYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVY 223 (443)
Q Consensus 144 ~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~~~~~G~i~lY 223 (443)
||++......+.+++|+|+|.. -.|++....|++.... ......||.+ |.+++|++||++++. .+....-
T Consensus 79 yy~~~~~~~~~~igva~s~~p~----Gpw~~~~~~~~~~~~~--~~~~~iDp~v-f~d~dG~~yl~~~~~---~~~~~~~ 148 (274)
T cd08990 79 YFPARDKDGGFAIGVAVSDSPA----GPFKDAGGPILITTPS--GGWYSIDPAV-FIDDDGQAYLYWGGG---LGLRVAK 148 (274)
T ss_pred EEEeecCCCceEEEEEEeCCCC----CCCCCCCCccccccCC--CCCCccCCcE-EECCCCCEEEEECCc---CCEEEEE
Confidence 9998754345678899998864 3688765445553211 2356789995 455689999999875 2333344
Q ss_pred EeCCCCCcEEccccccc-----CCCCCeeeeCcEEEeccCCccceeeccCCCceeeEEEEeeCCCceeEEEEE
Q 013412 224 WSWDFIHWTKLDHPLYS-----VQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLG 291 (443)
Q Consensus 224 ~S~Dl~~W~~~g~~l~~-----~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vL~~s~~~~~~~~Y~vG 291 (443)
.|+|+.+|+.....+.. ....+..|+|.+|+.+ | +++|++|........|.+.
T Consensus 149 l~~d~~~~~~~~~~i~~~~~~~~~~~~~~EgP~i~k~~--G-------------~YYl~yS~~~~~~~~~a~s 206 (274)
T cd08990 149 LKPDMLSLKGEPVEIVITDGAGDELRRFFEAPWVHKRN--G-------------TYYLSYSTGDPEEIAYATS 206 (274)
T ss_pred eCccccccCCCcEEEEeccccCCCCCCcccceeEEEEC--C-------------EEEEEEECCCCcEEEEEEc
Confidence 57899999755433321 1224568999999986 5 8889988754444455543
No 17
>cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F. This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma
Probab=99.70 E-value=1.4e-15 Score=147.67 Aligned_cols=192 Identities=20% Similarity=0.169 Sum_probs=131.6
Q ss_pred CCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCC----CCCccCCCCeEeeeEEEcCCCeEEEE
Q 013412 69 DPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALC----PSGPYDINSCWSGSVTILPGDKPFIL 144 (443)
Q Consensus 69 DPnG~~y~~G~YHlFyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~aL~----P~~~~D~~gv~SGsav~~~dg~~~l~ 144 (443)
||. ++.++|+|+||+..... . ...+..++|+||++|+..+.+|. +....+..++|.++++. .+|+++|+
T Consensus 2 DP~-v~~~~~~yyl~~t~~~~----~-~~~i~i~~S~Dl~~W~~~~~~~~~~~~~~~~~~~~~~waP~v~~-~~g~yyl~ 74 (271)
T cd08978 2 DPY-ILRYNGKYYLYGSTDDA----A-GPGVQVWSSKDLVNWRYEGAVFVAWRGRGEAKDSGGLWAPEVIY-YEGKYYLY 74 (271)
T ss_pred CCc-EEEECCEEEEEEecCCc----C-CCcEEEEECCccCCcEECCcccccccccCCcccCCceeCCeEEE-ECCEEEEE
Confidence 888 88999999999987643 2 35689999999999999998875 44455567899999987 48999999
Q ss_pred EccccC-CCceeEEEEEecCCCCCCcceeEEecCCceEeCCCCCCCCCCCCCEEEeecCCCeEEEEEeeeeC--CcceEE
Q 013412 145 YTGIDA-SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID--NEGMAF 221 (443)
Q Consensus 145 YTg~~~-~~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~~~--~~G~i~ 221 (443)
|++... ...+.+++|+|+|. ..|.+....+. + .......+||.|+ .+++|++||+.+.... +.+.+.
T Consensus 75 y~~~~~~~~~~~i~~a~s~d~-----~g~~~~~~~~~---~-~~~~~~~iDp~vf-~d~dg~~yl~~~~~~~~~~~~~i~ 144 (271)
T cd08978 75 YSVSDFDYNGSGIGVATSEDP-----TGPFEDKVIRP---P-TSNNGNSIDPTVF-KDDDGKYYLYYGSGDPGAGFGGIY 144 (271)
T ss_pred EEcccCCCCcccEEEEECCCC-----CCCccccccCc---C-ccCCCCccCcceE-EcCCCCEEEEEecccCCCCCCcEE
Confidence 998643 24567889999887 34444321111 1 1123467999965 5467999999987642 245677
Q ss_pred EEEeCCCCCcEEccccc--ccCCCCCeeeeCcEEEeccCCccceeeccCCCceeeEEEEeeCCCceeEEEEEE
Q 013412 222 VYWSWDFIHWTKLDHPL--YSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLGT 292 (443)
Q Consensus 222 lY~S~Dl~~W~~~g~~l--~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vL~~s~~~~~~~~Y~vG~ 292 (443)
+.++++...|......+ .......+.|+|.+|+.+ | +|+|++|........|.++-
T Consensus 145 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~EgP~~~k~~--g-------------~yyl~ys~~~~~~~~y~~~~ 202 (271)
T cd08978 145 ISELTDDLTKPTGPPVLSASSGNNNAVTEGPTIFKKN--G-------------YYYLTYSANGTGDYGYNIGY 202 (271)
T ss_pred EEEECcccccccCCceeeeeeccCCCceEccEEEEEC--C-------------EEEEEEEeCCCCCCCceEEE
Confidence 88886654443211111 112234589999999986 4 88888887543233465554
No 18
>cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.65 E-value=9.9e-15 Score=144.57 Aligned_cols=189 Identities=16% Similarity=0.154 Sum_probs=128.6
Q ss_pred CCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCC-ccCCCCeEeeeEEEcCCCeEEEEEcc
Q 013412 69 DPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSG-PYDINSCWSGSVTILPGDKPFILYTG 147 (443)
Q Consensus 69 DPnG~~y~~G~YHlFyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~aL~P~~-~~D~~gv~SGsav~~~dg~~~l~YTg 147 (443)
||. +++++|+|+||+..... ...+..++|+||+||+.++.+|.+.. .++..++|.++++. .+|+++|+||+
T Consensus 2 DP~-v~~~~g~yyl~~t~~~~------~~~i~~~~S~Dl~~W~~~~~~~~~~~~~~~~~~~waP~v~~-~~g~yyl~ys~ 73 (294)
T cd08991 2 DPF-VLRYNGKYYAYGTGGAD------GRGFAVYSSPDLVDWKLHGGALLALDDDWGRRGFWAPEVYY-YNGKFYMYYSA 73 (294)
T ss_pred CCe-EEEECCEEEEEEeCCCC------CCeeEEEECCCCCCceECCccccCCCCCccCCcEEccEEEE-ECCEEEEEEEe
Confidence 888 88999999999876532 13588999999999999998887654 36778999999887 58999999998
Q ss_pred ccCC-CceeEEEEEecCCCCCCcceeEEecCCceEeCCCCCCCCCCCCCEEEeecCCCeEEEEEeeeeCC---cceEEEE
Q 013412 148 IDAS-GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN---EGMAFVY 223 (443)
Q Consensus 148 ~~~~-~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~~~~---~G~i~lY 223 (443)
.... ..+.+++|+|+|.. -.|++....+ +.. .....||.++ .+++|+|||+.+..... .+....-
T Consensus 74 ~~~~~~~~~i~~a~s~~p~----gp~~~~~~~~-~~~-----~~~~iD~~vf-~d~dG~~yl~~~~~~~~~~~~~i~~~~ 142 (294)
T cd08991 74 NDRDEKTEHIGVAVSDSPL----GPFRDIKKPP-IDF-----EPKSIDAHPF-IDDDGKPYLYYSRNNYGNRVSDIYGTE 142 (294)
T ss_pred ccCCCCcceEEEEEeCCCC----CCCCcCCCCc-ccC-----CCcccCCceE-ECCCCCEEEEEEecCCCCcccceEEEE
Confidence 7543 45778899998863 3577643222 211 1356799954 44679999999865422 2333333
Q ss_pred EeCCCCCcEEccc----cccc--------------CCCCCeeeeCcEEEeccCCccceeeccCCCceeeEEEEeeCCCce
Q 013412 224 WSWDFIHWTKLDH----PLYS--------------VQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKH 285 (443)
Q Consensus 224 ~S~Dl~~W~~~g~----~l~~--------------~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vL~~s~~~~~~ 285 (443)
-|.|+.+|..... ++.. .....+.|+|.+++.+ | +|+|++|......
T Consensus 143 l~~d~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~EgP~~~k~~--g-------------~yyl~ys~~~~~~ 207 (294)
T cd08991 143 LVDDKLSIKTELVGPPIPVSAPGIDEIFERWRFGEGKDWRTNEGPTVLKHN--G-------------RYYLTYSANHYEN 207 (294)
T ss_pred EccceeeeccceeeccccccccccccccccccccccccCceeeCcEEEEEC--C-------------EEEEEEECCCCCC
Confidence 5788877752111 1111 0123479999999997 4 7888888643222
Q ss_pred eEEEEE
Q 013412 286 DYYVLG 291 (443)
Q Consensus 286 ~~Y~vG 291 (443)
..|.+|
T Consensus 208 ~~y~~~ 213 (294)
T cd08991 208 EDYGVG 213 (294)
T ss_pred CCceEE
Confidence 334443
No 19
>cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins. This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.61 E-value=2.8e-14 Score=143.76 Aligned_cols=177 Identities=19% Similarity=0.272 Sum_probs=127.1
Q ss_pred cccceeeecCCCCc-cCCCcceEECCEEEEEEEECCC-----------CC--CCCCCceEEEEEeCCCcccEeccCCCCC
Q 013412 54 YLTSYHFRPPQNWI-NDPNGPMYYKGVYHLFYQYNPL-----------GP--LFGDKMIWAHSVSYDLINWIHLSHALCP 119 (443)
Q Consensus 54 ~Rp~yH~~p~~gw~-NDPnG~~y~~G~YHlFyQ~~P~-----------~~--~~g~~~~Wgha~S~Dlv~W~~~~~aL~P 119 (443)
..|..=+.+..+.. .||..+++.+|+|||||++... .+ .|. ....+||+|+||+||++.+++|.+
T Consensus 23 ~~p~~~~~~e~~i~r~dP~~Vi~~~g~Y~mwYs~~~~~~~~~~~~~~~~~~~~w~-~y~I~~A~S~Dgv~W~~~g~~L~~ 101 (349)
T cd08992 23 IYPKGGLGYEEGVHRRDPSSVIKVDGLYHVWYTKSEGETDGFGTGDPEAKVFPWD-KCEIWHATSKDGWTWKEEGPAIGR 101 (349)
T ss_pred cCcccccccccCeecCCCceEEEECCEEEEEEEecCCcccccccCCccccccCCC-ceEEEEEECCCCCCceECCccccC
Confidence 34555555555544 5998899999999999996532 11 245 677899999999999999988875
Q ss_pred C--CccCCCCeEeeeEEEcCCCeEEEEEccccCC----CceeEEEEEecCCCCCCcceeEEecCCceEeCCC--------
Q 013412 120 S--GPYDINSCWSGSVTILPGDKPFILYTGIDAS----GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPN-------- 185 (443)
Q Consensus 120 ~--~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~----~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p~-------- 185 (443)
. ..||..++|.+.++. .+|+++|||++.... ..+.+++|+|+++. -.|++. .+||+.+..
T Consensus 102 ~~~g~Wd~~~vwaP~Vi~-~dGkyYM~Ysa~~~~~~~~~~~~IGvA~AdSp~----GpWtr~-d~Pil~p~~dg~w~~d~ 175 (349)
T cd08992 102 GEKGAYDDRSVFTPEVLE-HEGTYYLVYQVVKSPYLNRSFESIAMAVADSPY----GPWTKS-DEPILSPSNDGIWKGDE 175 (349)
T ss_pred CCCCCccccceECcEEEE-ECCEEEEEEEecccccCCCCcceEEEEEECCcc----cccccC-CCcEecCCcCCceeecc
Confidence 4 358999999999876 699999999975321 23567999998864 358885 589885421
Q ss_pred ----------CCCCCCCCCCEEEeecCCCeEEEEEeeeeC--------CcceEEEEEeCCCC-CcEEcc-cccc
Q 013412 186 ----------GVKDDMFRDPTTAWQAPDGRWRVLVGGQID--------NEGMAFVYWSWDFI-HWTKLD-HPLY 239 (443)
Q Consensus 186 ----------~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~~~--------~~G~i~lY~S~Dl~-~W~~~g-~~l~ 239 (443)
.++...+.||.|+ + .+|+|||++.+... ..-++.+..|++.. -|+... .|+.
T Consensus 176 ~~~~~~~~~g~wD~~~v~~P~v~-~-~~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~GPf~r~~~nPi~ 247 (349)
T cd08992 176 DNRFLVKKKGSFDSHKVHDPCLF-P-FNGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPEGPYVKSPYNPIT 247 (349)
T ss_pred CceeEeccCCCcccCceECCEEE-E-ECCEEEEEEEccccCcccccCCCCceEEEEEECCCCCCCEeCCCCccc
Confidence 1345567899965 4 47999999966431 12257788898874 676543 3443
No 20
>cd08998 GH43_ABN_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=99.60 E-value=7.2e-14 Score=138.22 Aligned_cols=190 Identities=21% Similarity=0.207 Sum_probs=126.8
Q ss_pred ccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCc-------cCCCCeEeeeEEEcCCC
Q 013412 67 INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGP-------YDINSCWSGSVTILPGD 139 (443)
Q Consensus 67 ~NDPnG~~y~~G~YHlFyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~aL~P~~~-------~D~~gv~SGsav~~~dg 139 (443)
+.||. +++++|+|+||+... ++++++|+||+||++.+.+|.+... .+..++|.+.++. .+|
T Consensus 1 ~~DP~-v~~~~~~yyl~~t~~----------~i~i~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~~wAP~v~~-~~g 68 (288)
T cd08998 1 VHDPS-IIKEGDTYYLFSTGN----------GIAIAKSKDLGNWTYVGSVFPTGPPWWSSIDPGGSGNLWAPDVIY-LNG 68 (288)
T ss_pred CCCCe-EEEECCEEEEEEcCC----------CeEEEECCCCCCcEECCccccCCCccccccccCCCCCccCCeEEE-ECC
Confidence 46998 899999999998753 4899999999999999988865432 3456799999876 499
Q ss_pred eEEEEEccccCC-CceeEEEEEecCC-CCCCcceeEEecCCceEeCCCCCCCCCCCCCEEEeecCCCeEEEEEeeeeCCc
Q 013412 140 KPFILYTGIDAS-GQQVQNLAMPENL-SDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNE 217 (443)
Q Consensus 140 ~~~l~YTg~~~~-~~~~q~lA~s~D~-~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~~~~~ 217 (443)
+++||||+.... ....+++|+|+|. . ..|++. +||+....+......+||.++ .+++|++||++++...
T Consensus 69 ~yyl~ys~~~~~~~~~~i~va~s~~~~~----gpw~~~--~~v~~~~~~~~~~~~iDp~vf-~d~dG~~Yl~~~~~~~-- 139 (288)
T cd08998 69 KYYLYYSVSTFGSNRSAIGLATSDTLPD----GPWTDH--GIVIESGPGRDDPNAIDPNVF-YDEDGKLWLSFGSFWG-- 139 (288)
T ss_pred EEEEEEEEEeCCCCceEEEEEEeCCCCC----CCCEEc--ceeeecCCCCCCcccccCCEE-EcCCCCEEEEeeeccC--
Confidence 999999986542 4566789999886 2 478874 588864332223467899955 5468999999986421
Q ss_pred ceEEEEE-eCC---CCCcEEcccccccCC-CCCeeeeCcEEEeccCCccceeeccCCCceeeEEEEeeCCCc---eeEEE
Q 013412 218 GMAFVYW-SWD---FIHWTKLDHPLYSVQ-ETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDK---HDYYV 289 (443)
Q Consensus 218 G~i~lY~-S~D---l~~W~~~g~~l~~~~-~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vL~~s~~~~~---~~~Y~ 289 (443)
| +.+.+ +.| ...|......+.... .....|-|.+|+-+ | +++|++|..... ...|.
T Consensus 140 ~-i~~~~l~~~~~~~~~~~~~~~~i~~~~~~~~~~Egp~~~k~~--g-------------~YYl~~S~~~~~~~~~~~y~ 203 (288)
T cd08998 140 G-IFLVELDPKTGKPLYPGGYGYNIAGRPRGHGAIEAPYIIYRG--G-------------YYYLFVSYGGCCAGEDSTYN 203 (288)
T ss_pred C-EEEEEeCcccCCccCCCCcceEEeccCCCCCceeeeEEEEeC--C-------------EEEEEEEcchhcCCCCCceE
Confidence 2 22222 222 123321111121111 23468999999886 4 788888753222 24465
Q ss_pred EEEE
Q 013412 290 LGTY 293 (443)
Q Consensus 290 vG~~ 293 (443)
++-+
T Consensus 204 v~~~ 207 (288)
T cd08998 204 IRVG 207 (288)
T ss_pred EEEE
Confidence 5543
No 21
>cd08984 GH43_5 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.58 E-value=9.3e-14 Score=138.04 Aligned_cols=170 Identities=22% Similarity=0.258 Sum_probs=120.2
Q ss_pred ccCCCcceEE--CCEEEEEEEE-CC---CC-CCCCCCceEEEEEeCC-CcccEeccCCCCCCCccCCCCeEeeeEEEcCC
Q 013412 67 INDPNGPMYY--KGVYHLFYQY-NP---LG-PLFGDKMIWAHSVSYD-LINWIHLSHALCPSGPYDINSCWSGSVTILPG 138 (443)
Q Consensus 67 ~NDPnG~~y~--~G~YHlFyQ~-~P---~~-~~~g~~~~Wgha~S~D-lv~W~~~~~aL~P~~~~D~~gv~SGsav~~~d 138 (443)
.-||. +++. +|+|||||.. .. .. ..|.....+++|+|+| |+||++++.++.++..++...+|.+.++. .+
T Consensus 11 ~~DP~-i~~~~~~~~~~~~yT~~~~~~~~~~~~w~~~~~i~~a~S~D~l~~W~~~g~~~~~~~~~~~~~~WAP~v~~-~~ 88 (294)
T cd08984 11 AADPT-IIYNRETKEWWMFYTNRRANVPTPGVAWVHGTDIGVASSKDGGATWTYRGTADGLEFECGRNTFWAPEVVW-HG 88 (294)
T ss_pred CCCCE-EEEeCCCCEEEEEEccccCcCCCCCcccCcCceEEEEEeCCCCCCCEEeeeeccCCCCCcccceeCceEEE-EC
Confidence 68999 8887 8899999942 21 11 2344246799999999 99999998777664455566789999887 49
Q ss_pred CeEEEEEccccC-----CCceeEEEEEecCCCCCCcceeEEecCCceEeCCCCCCCCCCCCCEEEeecCCCeEEEEEeee
Q 013412 139 DKPFILYTGIDA-----SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQ 213 (443)
Q Consensus 139 g~~~l~YTg~~~-----~~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~ 213 (443)
|+++|||+.... .....+++|+|+|. .+|++.+ ++.. + .....||.|+ ...+|+|+|++...
T Consensus 89 G~y~myys~~~~~~~~~~~~~~i~~a~S~Dl-----~~w~~~~--~~~~-~----~~~~iD~~vf-~~~dg~~yl~y~~~ 155 (294)
T cd08984 89 GVYHMYVTYIPGVPPDWGGPRRIVHYTSPNL-----WDWTFVG--RVDL-D----SDRVIDACVF-KLPDGRWRMWYKDE 155 (294)
T ss_pred CEEEEEEEecCCCCcccCCCcEEEEEECCCc-----CcceECC--cccc-C----CCCcEEeEEE-EeCCCEEEEEEECC
Confidence 999999997532 13456789999885 6898753 3321 1 1345799954 54679999999653
Q ss_pred eCCcceEEEEEeCCCCCcEEcccccccCCCCCeeeeCcEEEec
Q 013412 214 IDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVS 256 (443)
Q Consensus 214 ~~~~G~i~lY~S~Dl~~W~~~g~~l~~~~~~~~wECPdlf~l~ 256 (443)
.. ...+.+..|+|+.+|+..+..+. ...-|.|.+|+.+
T Consensus 156 ~~-~~~~~~a~s~D~~~w~~~~~~i~----~~~~EgP~v~k~~ 193 (294)
T cd08984 156 RR-GSTTYAADSEDLYHWTVEGPVLG----DRPHEGPNVFRWK 193 (294)
T ss_pred CC-CeEEEEEECCCCCEEEeCCcccc----CCCCCCCCeeEEC
Confidence 22 22456778999999997654332 1234999999986
No 22
>cd08985 GH43_6 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.55 E-value=1.5e-12 Score=127.69 Aligned_cols=190 Identities=18% Similarity=0.100 Sum_probs=129.5
Q ss_pred cCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCC----ccCCCCeEeeeEEEcC-CCeEE
Q 013412 68 NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSG----PYDINSCWSGSVTILP-GDKPF 142 (443)
Q Consensus 68 NDPnG~~y~~G~YHlFyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~aL~P~~----~~D~~gv~SGsav~~~-dg~~~ 142 (443)
.||. +++++|+|++|--....+..+ ...|...+|+||+||+.++.+|.+.. .....++|.++++..+ +|+++
T Consensus 4 h~~~-i~~~~~~yY~ygs~~~~~~~~--~~gi~~~sS~DLvnW~~~g~vl~~~~~~~~~~~~~~~waP~v~y~~~~g~Y~ 80 (265)
T cd08985 4 HGGG-ILKVGGTYYWYGENKGGGDTA--FGGVSCYSSTDLVNWTFEGLALTPEEDSADLGPGRIIERPKVIYNAKTGKYV 80 (265)
T ss_pred ccCc-eEEECCEEEEEEEecCCCCcc--cccEEEEECCCCccceECceeccccccccccccCcEEECCeEEEeCCCCEEE
Confidence 3554 888999999998765432111 34688899999999999999997764 3345678999988643 68999
Q ss_pred EEEccccCC-CceeEEEEEecCCCCCCcceeEEecCCceEeCCCCCCCCCCCCCEEEeecCCCeEEEEEeeeeCCcceEE
Q 013412 143 ILYTGIDAS-GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAF 221 (443)
Q Consensus 143 l~YTg~~~~-~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~~~~~G~i~ 221 (443)
|+|+....+ ....+++|+|++... .|+... .+. +. ....|||.|+ .++||++||++++..+ ..+.
T Consensus 81 m~~~~~~~~~~~~~igvA~Sd~p~G----pf~~~~-~~~---~~---~~~~~Dp~vf-~DdDG~~Yl~~~~~~~--~~i~ 146 (265)
T cd08985 81 MWMHIDSSDYSDARVGVATSDTPTG----PYTYLG-SFR---PL---GYQSRDFGLF-VDDDGTAYLLYSDRDN--SDLY 146 (265)
T ss_pred EEEEeCCCCCcceeEEEEEeCCCCC----CCEECC-ccC---CC---CCCccCCceE-EcCCCCEEEEEecCCC--CceE
Confidence 999986432 456788999987643 466532 221 21 2467999954 5578999999987632 2344
Q ss_pred EEE-eCCCCCcEEcccccccCCCCCeeeeCcEEEeccCCccceeeccCCCceeeEEEEeeCC---CceeEEEEEE
Q 013412 222 VYW-SWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS---DKHDYYVLGT 292 (443)
Q Consensus 222 lY~-S~Dl~~W~~~g~~l~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vL~~s~~~---~~~~~Y~vG~ 292 (443)
+.+ ++|+..+... +.. ...+...|||.+|+.+ | +|+|+.|... .....|++.+
T Consensus 147 i~~L~~d~~~~~~~--~~~-~~~~~~~EaP~i~K~~--g-------------~YYL~~S~~t~~~~~~~~y~~s~ 203 (265)
T cd08985 147 IYRLTDDYLSVTGE--VTT-VFVGAGREAPAIFKRN--G-------------KYYLLTSGLTGWNPNDARYATAT 203 (265)
T ss_pred EEEeCCCcccccce--EEE-ccCCCccccceEEEEC--C-------------EEEEEEccCCCccCCceEEEEec
Confidence 555 3677777532 211 1234578999999997 5 8888888632 2345676664
No 23
>cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=99.45 E-value=6.5e-12 Score=124.31 Aligned_cols=178 Identities=18% Similarity=0.213 Sum_probs=118.2
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCc--c----CCCCeEeeeEEEcCC
Q 013412 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGP--Y----DINSCWSGSVTILPG 138 (443)
Q Consensus 65 gw~NDPnG~~y~~G~YHlFyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~aL~P~~~--~----D~~gv~SGsav~~~d 138 (443)
+..-||. +++++|+|+||..... + ...+..++|+||+||++++.+|.+... + ...++|.+.++. .+
T Consensus 6 ~~~~DP~-i~~~~~~yy~~~t~~~----~--~~~i~~~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~ 77 (288)
T cd09000 6 GFYPDPS-ICRVGDDYYLVTSSFE----Y--FPGVPIFHSKDLVNWELIGHALTRPSQLDLDGLPDSGGIWAPTIRY-HD 77 (288)
T ss_pred CCCCCCC-EEEECCEEEEEECCcc----c--CCCceEEECCCcCCcEEcccccCCcccccccCCCCCCceEcceEEE-EC
Confidence 4567999 8999999998853211 1 235889999999999999988854321 1 345789999987 49
Q ss_pred CeEEEEEccccCCCceeEEEEEecCCCCCCcceeEEecCCceEeCCCCCCCCCCCCCEEEeecCCCeEEEEEeeeeC---
Q 013412 139 DKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID--- 215 (443)
Q Consensus 139 g~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~~~--- 215 (443)
|+++|||++........+.+|+|++..+ .|+. |++.. ....||.++ .+++|++||+.+....
T Consensus 78 g~yy~yy~~~~~~~~~~~~v~~s~~p~g----pw~~----~~~~~------~~~iDp~vf-~d~dG~~Y~~~~~~~~~~~ 142 (288)
T cd09000 78 GTFYLITTNVDGMKDGGNFIVTADDPAG----PWSD----PVWLD------SGGIDPSLF-FDDDGKVYLVGNGWDERRG 142 (288)
T ss_pred CEEEEEEEecCCCCCCceEEEEeCCCCC----CCcC----CEecC------CCccCCcee-EcCCCCEEEEecccCCccc
Confidence 9999999987532334567888887643 4642 33321 156899965 4478999999886432
Q ss_pred --CcceEEEEEeCCCCCcEEcccc--cccCCCCCeeeeCcEEEeccCCccceeeccCCCceeeEEEEeeC
Q 013412 216 --NEGMAFVYWSWDFIHWTKLDHP--LYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (443)
Q Consensus 216 --~~G~i~lY~S~Dl~~W~~~g~~--l~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vL~~s~~ 281 (443)
+.+.+.+.+. |...|+..+.+ +.........|+|.+|+.+ | +++|++|..
T Consensus 143 ~~~~~~i~~~~l-~~~~~~~~~~~~~~~~~~~~~~~Egp~v~k~~--g-------------~YYl~ys~~ 196 (288)
T cd09000 143 YNGHGGIWLQEI-DLETGKLLGEPKVIWNGTGGRWPEGPHLYKRD--G-------------WYYLLIAEG 196 (288)
T ss_pred cCCCCcEEEEEE-ccccCCCCCCcEEEEeCCCCCCcccCeEEEEC--C-------------EEEEEEecC
Confidence 1234444443 33345444432 2222223568999999986 4 788888754
No 24
>cd08983 GH43_4 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.41 E-value=3.3e-11 Score=118.86 Aligned_cols=183 Identities=11% Similarity=0.050 Sum_probs=122.3
Q ss_pred CCCccCCCcceEE--CCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCccCCCCeEeeeEEEcC-CCe
Q 013412 64 QNWINDPNGPMYY--KGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILP-GDK 140 (443)
Q Consensus 64 ~gw~NDPnG~~y~--~G~YHlFyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~aL~P~~~~D~~gv~SGsav~~~-dg~ 140 (443)
.+-+.||. ++.. +|+||||+...-....+.....+.+++|+||+||+..+.++.... ...++|.+.++.++ +|+
T Consensus 15 ~~~~rDP~-I~r~~~~g~yy~~~T~~~~~~~~~~~~~i~i~~S~DLv~W~~~~~~~~~~~--~~~~~WAPev~~d~~~g~ 91 (276)
T cd08983 15 TKGLRDPF-ILRSHEGGKYYMIATDLKITGQTNGSQYIVVWESTDLVNWTFQRLVKVNPP--NAGNTWAPEAFWDAERGQ 91 (276)
T ss_pred CCCccCCe-EEEcCCCCEEEEEEEecCcCCcccCCCeEEEEECCcccCCcccceeecCCC--CcCcEeCccceEcCCCCe
Confidence 35567999 7776 899999997653222222256799999999999999877642211 23568999988764 689
Q ss_pred EEEEEccccCC-----CceeEEEEEecCCCCCCcceeEEecCCceEeCCCCCCCCCCCCCEEEeecCCCeEEEEEeeeeC
Q 013412 141 PFILYTGIDAS-----GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID 215 (443)
Q Consensus 141 ~~l~YTg~~~~-----~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~~~ 215 (443)
++|+|+..... ....+..+.+.|. .+|++. .+++.. .....|+.+ ++ .+|+|||++....+
T Consensus 92 y~~~~s~~~~~~~~~~~~~~i~~~tt~Df-----~tft~p--~~~~~~-----~~~~ID~~v-~~-~~g~~Yl~~k~~~~ 157 (276)
T cd08983 92 YVVYWSSRLYDNTGGFYNYRLYATTTSDF-----VTFTEP--KVWIDL-----GANVIDTTV-VK-VGGTYYRFYKNEGS 157 (276)
T ss_pred EEEEEecccCCCCCCCccEEEEEEecCcc-----cccCCC--eEeecC-----CCCeEeeEE-EE-eCCEEEEEEecCCC
Confidence 99999986432 1122333443354 688752 466642 146689985 45 35899999976432
Q ss_pred CcceEEEEEeCCCC-CcEEcccccccCCCCCeeeeCcEEEeccCCccceeeccCCCceeeEEEEee
Q 013412 216 NEGMAFVYWSWDFI-HWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSL 280 (443)
Q Consensus 216 ~~G~i~lY~S~Dl~-~W~~~g~~l~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vL~~s~ 280 (443)
..|.+.+|++|. .|+...... .......|-|.+|+++.. .+|+|+++.
T Consensus 158 --~~i~~~~s~~l~g~~~~~~~~~--~~~~~~~EgP~v~k~~~~-------------~~y~L~~d~ 206 (276)
T cd08983 158 --KDIELARSKSLTGPWTIVGTGD--AGWGGAVEGPTVFKLNNG-------------GGWYLYGDN 206 (276)
T ss_pred --CcEEEEEeCCCCCCceEecccc--cCCCCceeCCeEEEECCC-------------CEEEEEEEE
Confidence 456778899986 787654321 122346899999999732 278887664
No 25
>cd09003 GH43_AXH_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose
Probab=99.41 E-value=1.6e-11 Score=123.11 Aligned_cols=186 Identities=16% Similarity=0.269 Sum_probs=123.4
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCC---------CCCCCceEEEEEeCCCcccEeccCCCCCC--CccCCCCeEeeeE
Q 013412 65 NWINDPNGPMYYKGVYHLFYQYNPLGP---------LFGDKMIWAHSVSYDLINWIHLSHALCPS--GPYDINSCWSGSV 133 (443)
Q Consensus 65 gw~NDPnG~~y~~G~YHlFyQ~~P~~~---------~~g~~~~Wgha~S~Dlv~W~~~~~aL~P~--~~~D~~gv~SGsa 133 (443)
.+..||. ++.++|+|+||........ .+. ...+-..+|+||++|+.++.++.|. ..+. .++|.+.+
T Consensus 7 ~~~aDP~-~~~~~g~yY~~~t~~~~~~~~~~~~~~~~~~-~~~i~v~~S~DL~~W~~~g~v~~~~~~~~w~-~~~WAP~v 83 (311)
T cd09003 7 RYGADPT-AVVYNGRVYVYTTNDDYEYDSNTIKDNNYYN-INDITVISSDDMVNWTDHGEIFVPNGIAKWA-GNSWAPSI 83 (311)
T ss_pred CccCCCC-eEEECCEEEEEeCCCCccccccccccCCccc-cCcEEEEECCCCCCcEEcccccCcCCCCCcc-cccCCCce
Confidence 4668998 6789999999987643221 122 3458889999999999999998742 3443 47899998
Q ss_pred EEcCC----CeEEEEEccccCCCceeEEEEEecCCCCCCcceeEEecCCceEeCC-CCCCC-CCCCCCEEEeecCCCeEE
Q 013412 134 TILPG----DKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPP-NGVKD-DMFRDPTTAWQAPDGRWR 207 (443)
Q Consensus 134 v~~~d----g~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p-~~~~~-~~fRDP~Vvw~~~~g~~~ 207 (443)
+. .+ |+++|||+.. ...+++|+|++.. -.|+...+.|++... ++... ....||.++ .++||++|
T Consensus 84 ~~-~~~~~~gkyylyy~~~----~~~igva~SdsP~----GP~~~~~g~~l~~~~~~~~~~~~~~iDp~~f-~DdDG~~Y 153 (311)
T cd09003 84 AV-KKINGKGKFYLYFANG----GGGIGVLTADSPV----GPWTDPLGKPLITGSTPGCAGVVWLFDPAVF-VDDDGQGY 153 (311)
T ss_pred EE-eccCCCCEEEEEEecC----CCeEEEEEcCCCC----CCcccCCCCeeecCCCCCccCCccccCCCeE-ECCCCCEE
Confidence 76 46 9999999853 2357899998864 367764356777432 22111 123799954 45789999
Q ss_pred EEEeeeeC-----CcceEEEEE-eCCCCCcEEcccccccCCCCCeeeeCcEEEeccCCccceeeccCCCceeeEEEEeeC
Q 013412 208 VLVGGQID-----NEGMAFVYW-SWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (443)
Q Consensus 208 Mv~ga~~~-----~~G~i~lY~-S~Dl~~W~~~g~~l~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vL~~s~~ 281 (443)
|+.++... ..+.+.+.+ ++|+..- .+++..- .....+|.|.+++.+ | +++|++|..
T Consensus 154 l~~g~~~~~~~~~~~~~i~i~~l~~D~~~~--~g~~~~i-~~~~~~Egp~~~K~~--G-------------~YYL~ys~~ 215 (311)
T cd09003 154 LYFGGGVPGGRWANPNTARVIKLGDDMISV--DGSAVTI-DAPYFFEASGLHKIN--G-------------TYYYSYCTN 215 (311)
T ss_pred EEECCccCCCccccCCCEEEEEeCCCceec--cCCceEc-cCCCceEeeeEEEEC--C-------------EEEEEEeCC
Confidence 99986421 123344554 4566443 2322111 123579999999986 5 888888864
No 26
>PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B ....
Probab=99.41 E-value=2.7e-11 Score=119.00 Aligned_cols=183 Identities=20% Similarity=0.246 Sum_probs=127.1
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCccC--CCCe-EeeeEEEcCCCeE
Q 013412 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYD--INSC-WSGSVTILPGDKP 141 (443)
Q Consensus 65 gw~NDPnG~~y~~G~YHlFyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~aL~P~~~~D--~~gv-~SGsav~~~dg~~ 141 (443)
+..-||. ++..+|+|+||+...... ..+..++|+||+||+..+.+|.+....+ ..+. |.+.++. .+|++
T Consensus 8 ~~~~DP~-i~~~~~~yY~~~t~~~~~------~~i~v~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~WAP~i~~-~~g~y 79 (286)
T PF04616_consen 8 GDYADPS-IVRFGDGYYLYGTTDPEG------PGIPVWSSKDLVNWTDAGNVLPPPPDWDWANNGNIWAPEIHY-INGKY 79 (286)
T ss_dssp SSECSEE-EEEETTEEEEEEEEBTCE------SBEEEEEESSSSSEEEEEECESSTTTTSTTTSETTEEEEEEE-ETTEE
T ss_pred CCCCCCE-EEEECCEEEEEEEcCCCC------CeEEEEECCCCcccccceeeecccccccccccccccCCeEEE-cCCeE
Confidence 5667999 999999999999776432 4588999999999999998876664333 2233 9999876 59999
Q ss_pred EEEEccccCCCceeEEEEEecCCCCCCcceeEEecCCceEeCCCCCCCCCCCCCEEEeecCCCeEEEEEeeeeCC--cce
Q 013412 142 FILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN--EGM 219 (443)
Q Consensus 142 ~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~~~~--~G~ 219 (443)
+|||+.........+.+|+|++.. -.|+... ...+. .....||.++ .+++|++||+.+..... .+.
T Consensus 80 y~y~~~~~~~~~~~~~va~a~~~~----Gp~~~~~-~~~~~------~~~~iD~~vf-~d~dG~~Yl~~~~~~~~~~~~~ 147 (286)
T PF04616_consen 80 YMYYSDSGGDAGSGIGVATADSPD----GPWTDPG-KIPIP------GGNSIDPSVF-VDDDGKYYLYYGSWDNGDPGGG 147 (286)
T ss_dssp EEEEEEESTSTTEEEEEEEESSTT----S-EEEEE-EEEEE------SSSSSSEEEE-EETTSEEEEEEEESTTTSSEEE
T ss_pred EEEEEccCCCCCcceeEEEeCCcc----ccccccc-ceeec------cccccCceEE-EecCCCcEEeCcccCCCcccee
Confidence 999993222355668899998874 4788753 22222 2456899965 44679999999886532 234
Q ss_pred EEEEE-eCCCCCcEEcc-cccccC---CCCCeeeeCcEEEeccCCccceeeccCCCceeeEEEEeeCC
Q 013412 220 AFVYW-SWDFIHWTKLD-HPLYSV---QETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS 282 (443)
Q Consensus 220 i~lY~-S~Dl~~W~~~g-~~l~~~---~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vL~~s~~~ 282 (443)
+.+.+ ++|...+.... ..+... ......|+|.+|+.+ | +++|++|...
T Consensus 148 i~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~~~Egp~~~k~~--g-------------~yYl~~s~~~ 200 (286)
T PF04616_consen 148 IYIAELDPDGTSLTGEPVVVIFPGDEGWDGGVVEGPFVFKHG--G-------------KYYLFYSAGG 200 (286)
T ss_dssp EEEEEEETTTSSEEEEECEEEEEESGSSTTTBEEEEEEEEET--T-------------EEEEEEEESG
T ss_pred EEeecccCccccccCcccccccccccccCCccccceEEEEcC--C-------------CEEEEEeccC
Confidence 55555 46776666543 122222 235689999999987 4 7888888643
No 27
>PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety. On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B.
Probab=99.37 E-value=4.3e-12 Score=127.15 Aligned_cols=159 Identities=23% Similarity=0.379 Sum_probs=110.1
Q ss_pred cceEECCE--EEEEEEECCCCCCCCCCceEEEEEeCCCcccEec-cCCCCCCCccCCCCeEeeeEEEcCCCeEEEEEccc
Q 013412 72 GPMYYKGV--YHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHL-SHALCPSGPYDINSCWSGSVTILPGDKPFILYTGI 148 (443)
Q Consensus 72 G~~y~~G~--YHlFyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~-~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~ 148 (443)
|++.++|. |||.|...-. ..+ ..+.|.|.|+|.+||+.. .++|.|+..++..||....++.. +|+++|+||+.
T Consensus 36 gai~~~~~~R~~l~yr~~~~--~~~-~~~iglA~S~DGi~f~~~~~pil~P~~~~e~~GvEDPRVt~i-~d~yymtYta~ 111 (312)
T PF04041_consen 36 GAIVFDGGLRVYLLYRAYGS--DIG-SSRIGLARSDDGIHFERDPEPILYPDTDYEEWGVEDPRVTKI-DDTYYMTYTAY 111 (312)
T ss_dssp EEEEETTE--EEEEEEEEES--SSS-EEEEEEEEESSSSS-EE-SS-SBEE-SSTTHTEEEEEEEEEE-TTEEEEEEEEE
T ss_pred cEEEECCeeEEEEEEEeECC--CCc-eeEEEEEEccCCcCceECCCCEEccCCCCcccCccceeEEEE-CCEEEEEEEEe
Confidence 46656665 8998865432 222 348999999999999988 47899999999999999999874 89999999998
Q ss_pred cCCCceeEEEEEecCCCCCCcceeEEecCCceEeCCC---CCCCCCCCCCEEEeec-CCCeEEEEEeeeeCCcceEEEEE
Q 013412 149 DASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPN---GVKDDMFRDPTTAWQA-PDGRWRVLVGGQIDNEGMAFVYW 224 (443)
Q Consensus 149 ~~~~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p~---~~~~~~fRDP~Vvw~~-~~g~~~Mv~ga~~~~~G~i~lY~ 224 (443)
+. ....+++|+|+|. .+|+|.+ +++.... ......-+|-. +|.+ .+|+|+|+.+ .+.+.+..
T Consensus 112 ~~-~~~~~~la~s~D~-----~~~~r~g--~~~~~~~~~~~~~~~~~kd~~-lfp~ki~Gky~m~~r-----~~~i~la~ 177 (312)
T PF04041_consen 112 SG-KGPRIGLATSKDF-----KHWERHG--KIFPPFNGNEDYRDFWSKDGA-LFPEKINGKYAMLHR-----DPSIWLAY 177 (312)
T ss_dssp ES-SSEEEEEEEESSS-----SSEEEEE--CTTTTTCTS-EEEEEEEECCE-EEESEETTEEEEEEE-----SSSBEEEE
T ss_pred cC-CCcccceEEccch-----HhhEEec--cccCcccccccccccccCceE-EEEEEECCEEEEEEC-----CCCEEEEe
Confidence 74 4567899999996 8999985 2221111 00011225544 3332 5899999998 34678999
Q ss_pred eCCCCCcEEcccccccCCCCCeeee
Q 013412 225 SWDFIHWTKLDHPLYSVQETGMWEC 249 (443)
Q Consensus 225 S~Dl~~W~~~g~~l~~~~~~~~wEC 249 (443)
|+|+++|+....++.. ...+.||+
T Consensus 178 S~Dl~~W~~~~~~~~~-~~~~~~d~ 201 (312)
T PF04041_consen 178 SPDLIHWGNHREPLLS-PRPGWWDS 201 (312)
T ss_dssp ESSSSSEEEEBETSB---STTSSCS
T ss_pred cCCccccccccccccc-CCCCcChh
Confidence 9999999877554433 23456776
No 28
>cd08988 GH43_ABN Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla
Probab=99.34 E-value=9.9e-11 Score=115.52 Aligned_cols=180 Identities=17% Similarity=0.176 Sum_probs=116.1
Q ss_pred cCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCcc-------CCCCeEeeeEEEcCCCe
Q 013412 68 NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPY-------DINSCWSGSVTILPGDK 140 (443)
Q Consensus 68 NDPnG~~y~~G~YHlFyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~aL~P~~~~-------D~~gv~SGsav~~~dg~ 140 (443)
.||. ++.++|+|+||-.. . .+..++|+||+||+..+.+|.+...+ ...++|.+.++. .+|+
T Consensus 1 ~DP~-vi~~~~~YY~~~T~------~----g~~v~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~G~ 68 (279)
T cd08988 1 HDPV-IIKEGDTWYVFGTG------P----GITILSSKDLVNWTYSGSAFATEPTWKKRVPPSFDGHLWAPDIYQ-HNGK 68 (279)
T ss_pred CCCE-EEEECCEEEEEEec------C----CEEEEECCCcCCccccCccccCCCccccccCCCCCCCEecceEEE-ECCE
Confidence 4898 88889999998642 1 37789999999999999888644322 235799999876 5899
Q ss_pred EEEEEccccCC-CceeEEEEEecCCCCCCc-ceeEEecCCceEeCCCCCCCCCCCCCEEEeecCCCeEEEEEeeeeCCcc
Q 013412 141 PFILYTGIDAS-GQQVQNLAMPENLSDPLL-KDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEG 218 (443)
Q Consensus 141 ~~l~YTg~~~~-~~~~q~lA~s~D~~d~~l-~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~~~~~G 218 (443)
++|||+..... ....+++|+|++...|+- ..|++ ..+++..... ......||.+++ ++||++||+.|+.. .|
T Consensus 69 yylyys~~~~~~~~~~igva~s~~p~Gp~~~~~w~~--~~~i~~~~~~-~~~~~iDp~~f~-DdDG~~Yl~~g~~~--~g 142 (279)
T cd08988 69 FYLYYSVSAFGSNTSAIGLAVNKTIDGPSPDYGWEK--GGVVISSDAS-DNYNAIDPAIIF-DQHGQPWLSFGSFW--GG 142 (279)
T ss_pred EEEEEEeccCCCCCceEEEEEcCCCCCCCcCcCccc--cCceEecCCC-CCCCccCCceEE-cCCCCEEEEecccC--CC
Confidence 99999976432 346778999988765431 12443 2466643221 123457999554 47899999998642 12
Q ss_pred eEEEEE-eCCCCCcEEcccc--cccC-CCCCeeeeCcEEEeccCCccceeeccCCCceeeEEEEeeC
Q 013412 219 MAFVYW-SWDFIHWTKLDHP--LYSV-QETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (443)
Q Consensus 219 ~i~lY~-S~Dl~~W~~~g~~--l~~~-~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vL~~s~~ 281 (443)
+.+.+ +.|+..-...+.. +... ......|-|-+++-+ | +++|++|..
T Consensus 143 -i~~~eL~~d~~~~~~~~~~~~i~~~~~~~~~~Egp~i~k~~--g-------------~YYl~~S~g 193 (279)
T cd08988 143 -IKLFELDKDTMKPAEPGELHSIAGRERSSAAIEAPFILYRG--D-------------YYYLFVSFG 193 (279)
T ss_pred -EEEEEECcccCCccCCCcceEEeccCCCCCceEeeEEEEcC--C-------------eEEEEEEcC
Confidence 33333 3454332111111 1111 123467999999886 4 788887763
No 29
>cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J. This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta
Probab=99.32 E-value=3.3e-11 Score=117.40 Aligned_cols=137 Identities=23% Similarity=0.317 Sum_probs=98.0
Q ss_pred CCccCCCcceEEC-CEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCC-------CCCccCCCCeEeeeEEEc
Q 013412 65 NWINDPNGPMYYK-GVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALC-------PSGPYDINSCWSGSVTIL 136 (443)
Q Consensus 65 gw~NDPnG~~y~~-G~YHlFyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~aL~-------P~~~~D~~gv~SGsav~~ 136 (443)
+.+-||. +++.+ |+|||||...... ... ...+++|+|+|+++|+..+..+. +...++...+.++.++.+
T Consensus 64 ~~~~~p~-v~~~~dg~~~~~Yt~~~~~-~~~-~~~i~~A~S~D~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~dP~v~~~ 140 (276)
T cd08979 64 GGVWTPS-VVRDPDGTYRMFYTGYDRP-KGA-VQRIGLATSKDLIHWTKHGPNPVPRWYESGNPGPWDDHAWRDPAVVRD 140 (276)
T ss_pred CCeEcce-EEEcCCCeEEEEEecccCC-CCC-cceEEEEECCCCCceEECCCCcceeeeecCCCCCcccccccccEEEEE
Confidence 3456787 67777 9999999976532 222 67899999999999999876542 223344556788998876
Q ss_pred CC-CeEEEEEccccCCCceeEEEEEecCCCCCCcceeEEecCCceEeCCCCCCCCCCCCCEEEeecCCCeEEEEEeee
Q 013412 137 PG-DKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQ 213 (443)
Q Consensus 137 ~d-g~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~ 213 (443)
++ |+++|+|++........+.+|.|+|+ .+|++....+.. ..+.....+++|.++ + .+|+|+|++.+.
T Consensus 141 ~~~g~y~m~~~~~~~~~~~~i~~a~S~D~-----~~W~~~~~~~~~--~~~~~~~~~e~P~~~-~-~~g~~~l~~~~~ 209 (276)
T cd08979 141 EEGGGWRMYYGARDADERGAIGLATSPDL-----IHWTPVPPPPGP--RTGYDDGQLEVPQVV-K-IDGRWYLLYSGR 209 (276)
T ss_pred CCCCEEEEEEEeEccCCCcEEEEEECCCC-----CcceECCCCCCC--CCcccCCcCccceEE-E-ECCEEEEEEEec
Confidence 43 89999999875445567889999886 799986433212 122234678999954 4 468999999876
No 30
>cd08981 GH43_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.28 E-value=2.9e-10 Score=112.96 Aligned_cols=134 Identities=19% Similarity=0.190 Sum_probs=93.8
Q ss_pred CCccCCCcceEE--CCEEEEEEEECCCC-CCCCCCceEEEEEeCCCcccEeccCCCCCCC-ccCCCCeEeeeEEEcCCCe
Q 013412 65 NWINDPNGPMYY--KGVYHLFYQYNPLG-PLFGDKMIWAHSVSYDLINWIHLSHALCPSG-PYDINSCWSGSVTILPGDK 140 (443)
Q Consensus 65 gw~NDPnG~~y~--~G~YHlFyQ~~P~~-~~~g~~~~Wgha~S~Dlv~W~~~~~aL~P~~-~~D~~gv~SGsav~~~dg~ 140 (443)
.++.||. ++++ +|+||||....... ..+ ...+.+.+|+||+||+..+.++.+.. .+...++|.+.++. .+|+
T Consensus 4 ~~~~DP~-v~~~~~~g~yYl~~T~~~~~~~~~--~~gi~v~~S~DLv~W~~~g~~~~~~~~~~~~~~~WAP~v~~-~~G~ 79 (291)
T cd08981 4 IRIRDPF-ILADPETGTYYLYGTTDPNIWGGE--GTGFDVYKSKDLKDWEGPYPVFRPPDDFWADDNFWAPEVHE-YKGR 79 (291)
T ss_pred ccccCCE-EEEECCCCEEEEEEecCccccccC--CCcEEEEECCChhcccccceeeccCCCcCccccccCCeeee-eCCE
Confidence 4578998 8887 99999999754322 111 24689999999999999998886543 33456789999875 6999
Q ss_pred EEEEEccccCC-CceeEEEEEecCCCCCCcceeEEecCCceEeCCCCCCCCCCCCCEEEeecCCCeEEEEEee
Q 013412 141 PFILYTGIDAS-GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGG 212 (443)
Q Consensus 141 ~~l~YTg~~~~-~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~~~g~~~Mv~ga 212 (443)
++|||+..... ....+.+|+|++..+ .|+.....|+... .....||.+ |.++||++||+.+.
T Consensus 80 yyly~s~~~~~~~~~~~~va~s~~p~G----P~~~~~~~~~~~~-----~~~~iDp~~-f~DdDG~~Yl~~~~ 142 (291)
T cd08981 80 YYMFATFHNPGGERRGTAILVSDSPEG----PFVPHSDGPVTPE-----DWMCLDGTL-YVDEDGKPWMVFCH 142 (291)
T ss_pred EEEEEEeccCCCceeeEEEEECCCCCC----CCEeCCCCccCCC-----CCceEcCce-EEcCCCCEEEEEEe
Confidence 99999875432 223467899887643 5765433344321 124579984 55578999999864
No 31
>cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins. This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.23 E-value=5.1e-10 Score=113.06 Aligned_cols=169 Identities=19% Similarity=0.243 Sum_probs=113.3
Q ss_pred CCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCc-ccEecc-CCCCCCC------------------ccCCCCe
Q 013412 69 DPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHLS-HALCPSG------------------PYDINSC 128 (443)
Q Consensus 69 DPnG~~y~~G~YHlFyQ~~P~~~~~g~~~~Wgha~S~Dlv-~W~~~~-~aL~P~~------------------~~D~~gv 128 (443)
.|. +++++|+|||||+..-.........+.|.|+|++.. .|++.. +.|.|.. .+|..++
T Consensus 114 aP~-Vi~~dGkyYM~Ysa~~~~~~~~~~~~IGvA~AdSp~GpWtr~d~Pil~p~~dg~w~~d~~~~~~~~~~g~wD~~~v 192 (349)
T cd08992 114 TPE-VLEHEGTYYLVYQVVKSPYLNRSFESIAMAVADSPYGPWTKSDEPILSPSNDGIWKGDEDNRFLVKKKGSFDSHKV 192 (349)
T ss_pred CcE-EEEECCEEEEEEEecccccCCCCcceEEEEEECCcccccccCCCcEecCCcCCceeeccCceeEeccCCCcccCce
Confidence 455 778999999999853211111113578888888876 698763 4566642 3566777
Q ss_pred EeeeEEEcCCCeEEEEEccccC-------CCceeEEEEEecCCCCCCcceeEEecCCceEeCCCCCCCCCCCCCEEEeec
Q 013412 129 WSGSVTILPGDKPFILYTGIDA-------SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQA 201 (443)
Q Consensus 129 ~SGsav~~~dg~~~l~YTg~~~-------~~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~ 201 (443)
...+++. .+|+++|||+|+.. ...+.+++|+|++..+ .|+|.+.|||+... + ..+ ||+.
T Consensus 193 ~~P~v~~-~~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~G----Pf~r~~~nPi~~~~------~--~~~-~~~~ 258 (349)
T cd08992 193 HDPCLFP-FNGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPEG----PYVKSPYNPITNSG------H--ETC-VWQY 258 (349)
T ss_pred ECCEEEE-ECCEEEEEEEccccCcccccCCCCceEEEEEECCCCC----CCEeCCCCcccCCC------C--ceE-EEec
Confidence 7777665 59999999999752 1356789999998864 58888889998422 2 236 6884
Q ss_pred CCCeE-EEEEeeeeCCcceEEEEEeCCCCCcEEcccccccCCCCCeeeeCcEEEec
Q 013412 202 PDGRW-RVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVS 256 (443)
Q Consensus 202 ~~g~~-~Mv~ga~~~~~G~i~lY~S~Dl~~W~~~g~~l~~~~~~~~wECPdlf~l~ 256 (443)
.+.+ .|+..- ...+|. +..|+|+++|+....+...+...+..+|||-+.-+
T Consensus 259 -~~~~~~~~~~d-~~~~~~--~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (349)
T cd08992 259 -KGGIAAMLTTD-GPEKNT--IQFAPDGINFEIMAHIKGAPEAIGPYRRPDADEDP 310 (349)
T ss_pred -CCceEEEEecc-CCCCce--EEeCCCCccEEEeeeccCCCccccCccCcccccCC
Confidence 4556 555433 333454 66899999999776543334445667777766655
No 32
>cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended
Probab=99.19 E-value=1.6e-09 Score=106.45 Aligned_cols=174 Identities=18% Similarity=0.195 Sum_probs=112.6
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCcc------CCCCeEeeeEEEcCC
Q 013412 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPY------DINSCWSGSVTILPG 138 (443)
Q Consensus 65 gw~NDPnG~~y~~G~YHlFyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~aL~P~~~~------D~~gv~SGsav~~~d 138 (443)
+..-||. ++.++|+|+||+..... .......+|+||+||+..+.++...... ...++|.+.++. .+
T Consensus 6 ~~~~DP~-ii~~~~~yY~~~t~~~~------~~g~~~~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~ 77 (269)
T cd08989 6 GDNPDPS-IIRAGDDYYMASSTFEW------FPGVQIHHSTDLVNWHLIGHPLDRLEDLDMKGNPYSGGIWAPCLSY-YD 77 (269)
T ss_pred CCCCCCc-EEEECCeEEEEECcccc------CCCcEEEECCccCCCEEccccccCccccccccCCCCCcEEcceEEE-EC
Confidence 5567999 99999999999843211 1236778999999999998877543211 235799999876 59
Q ss_pred CeEEEEEccccCCCceeEEEEEecCCCCCCcceeEEecCCceEeCCCCCCCCCCCCCEEEeecCCCeEEEEEeeeeCCcc
Q 013412 139 DKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEG 218 (443)
Q Consensus 139 g~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~~~~~G 218 (443)
|+++|+|+.........+++|++++..+ .|+. |+... ....||.++ .++||+.||+.+.. +
T Consensus 78 G~yy~yy~~~~~~~~~~i~va~sd~~~G----pw~~----~~~~~------~~~IDp~~f-~D~dG~~Yl~~~~~----~ 138 (269)
T cd08989 78 GKFWLIYTAVKVWKDCHNYLFTAEDITG----PWSR----PIFLN------YGGFDPSLF-HDDDGKKYLINMGW----S 138 (269)
T ss_pred CEEEEEEeccccCCCceEEEEEECCCCC----CCcC----CEECC------CCcccCceE-EcCCCCEEEEecCC----C
Confidence 9999999986433345678999987643 4543 44321 235899954 45799999998753 2
Q ss_pred eEEEEE-eCCCCCcEEcccc----cccCCCCCeeeeCcEEEeccCCccceeeccCCCceeeEEEEeeCC
Q 013412 219 MAFVYW-SWDFIHWTKLDHP----LYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS 282 (443)
Q Consensus 219 ~i~lY~-S~Dl~~W~~~g~~----l~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vL~~s~~~ 282 (443)
.+.+.+ +.|... ..+.+ +.........|-|.+++-+ | +++|++|...
T Consensus 139 ~i~l~~l~~~~~~--~~~~~~~~~~~~~~~~~~~Egp~~~k~~--G-------------~YYl~~S~~~ 190 (269)
T cd08989 139 GIRLQEYSPAEKK--LIGKPLNKVIIKGTDDGLTEGPHLYKIN--G-------------KYYLTTAEGG 190 (269)
T ss_pred cEEEEEEChhhCC--CCCCceeEEEecCCCCCccccceEEEEC--C-------------EEEEEEeeCC
Confidence 233333 223211 01111 1111223468999999875 4 7888888643
No 33
>cd08986 GH43_7 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.12 E-value=2.7e-09 Score=104.85 Aligned_cols=179 Identities=17% Similarity=0.148 Sum_probs=112.6
Q ss_pred CccCCCcceEE-CCEEEEEEEECCCCC----CCCCCceEEEEEeCCCcccEeccCCCCCCCc------------cCCCCe
Q 013412 66 WINDPNGPMYY-KGVYHLFYQYNPLGP----LFGDKMIWAHSVSYDLINWIHLSHALCPSGP------------YDINSC 128 (443)
Q Consensus 66 w~NDPnG~~y~-~G~YHlFyQ~~P~~~----~~g~~~~Wgha~S~Dlv~W~~~~~aL~P~~~------------~D~~gv 128 (443)
||-||. ++.. +|+|+|+......+. .|........++|+||+||+..+.++..... ....++
T Consensus 1 ~~rDP~-v~~~~dg~Yy~~~T~~~~~~~~~~~~~~~~gi~i~~S~DLv~W~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~ 79 (269)
T cd08986 1 WIRDTY-VTLGPDGYYYLTGTTPPPGLPFEDCSIVNDGIPLWRSKDLKKWESLGLIWDREKDATWQSYWIDEDDWYKNAV 79 (269)
T ss_pred CCcCCe-EEecCCCcEEEEEccCCccccccccccCCCceEEEeCccccCccccCcccccCCcccccccccccCCcccCCc
Confidence 678999 6665 679999987543221 1110245778999999999999888754321 234578
Q ss_pred EeeeEEEcCCCeEEEEEccccCC-CceeEEEEEecCCCCCCcceeEEecCC-ceEeCCCCCCCCCCCCCEEEeecCCCeE
Q 013412 129 WSGSVTILPGDKPFILYTGIDAS-GQQVQNLAMPENLSDPLLKDWVKFSGN-PVMTPPNGVKDDMFRDPTTAWQAPDGRW 206 (443)
Q Consensus 129 ~SGsav~~~dg~~~l~YTg~~~~-~~~~q~lA~s~D~~d~~l~~w~k~~~n-Pvi~~p~~~~~~~fRDP~Vvw~~~~g~~ 206 (443)
|.+.+.. .+|+++|+|+..... ....+++|++++.. -.|+..... ++ ..-.||.+ |.+.||++
T Consensus 80 WAP~v~~-~~g~yyl~~s~~~~~~~~~~i~va~a~~p~----Gp~~~~~~~~~~---------~~~iD~~~-f~D~DG~~ 144 (269)
T cd08986 80 WAPELHY-IKGRWYLVACMNNPGYGGSSILLSTSGKIE----GPYKHITGNKPL---------FPGIDPSL-FEDDDGKV 144 (269)
T ss_pred CCceEEE-ECCEEEEEEEccCCCCCceEEEEEeCCCCC----CCcEeccCCCCC---------CCccCCce-EEcCCCCE
Confidence 9999876 589999999976432 34556788877664 346653221 11 23479984 55578999
Q ss_pred EEEEeeeeCCcceEEEEEeCCCCCcEEcccccccC----CCCCeeeeCcEEEeccCCccceeeccCCCceeeEEEEeeC
Q 013412 207 RVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSV----QETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (443)
Q Consensus 207 ~Mv~ga~~~~~G~i~lY~S~Dl~~W~~~g~~l~~~----~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vL~~s~~ 281 (443)
||+.+... + .--+.|+....-....+... ......|-|-+++.+ | +++|++|..
T Consensus 145 Yl~~~~~~-----i-~~l~~d~~~~~~~~~~~~~~~~~~~~~~~~EgP~i~k~~--G-------------~YYL~yS~~ 202 (269)
T cd08986 145 YLVWHNTL-----I-ARLKDDLSGLAGDPVRIDPSPTFYKDEIGHEGAFVFKYG--G-------------KYYLFGTAW 202 (269)
T ss_pred EEEeeCCc-----e-EeccCccccccCCcEEEecccccccCCccccccEEEEEC--C-------------EEEEEEeec
Confidence 99987531 1 11245655432111111111 012357999999875 4 888888863
No 34
>cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=99.11 E-value=3e-09 Score=104.44 Aligned_cols=169 Identities=14% Similarity=0.105 Sum_probs=111.0
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCc-----------cCCCCeEeeeE
Q 013412 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGP-----------YDINSCWSGSV 133 (443)
Q Consensus 65 gw~NDPnG~~y~~G~YHlFyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~aL~P~~~-----------~D~~gv~SGsa 133 (443)
++..||. +++++|+|+||....- + ...+...+|+||+||+..+.++.+... .-..++|.+.+
T Consensus 9 ~~~~DP~-v~~~~~~yY~~~t~~~----~--~~gi~v~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~WAP~v 81 (269)
T cd09001 9 ADYPDPD-VIRVGDDYYMVSTTMH----Y--SPGAPILHSKDLVNWEIIGYVYDRLDDGDAYNLENGGNAYGKGQWAPSL 81 (269)
T ss_pred CCCCCCe-EEEECCEEEEEECCcc----c--CCCCEEEEcccccCCeEcccccccccccccccccccCCCCCCCEECCce
Confidence 4557999 8889999999985321 1 124678899999999999877643211 11347899998
Q ss_pred EEcCCCeEEEEEccccCCCceeEEEEEecCCCCCCcceeEEecCCceEeCCCCCCCCCCCCCEEEeecCCCeEEEEEeee
Q 013412 134 TILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQ 213 (443)
Q Consensus 134 v~~~dg~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~ 213 (443)
+. .+|+++|+|+.. ...+.+|+|++.. -.|+.. +++ ....||.++ .++||+.||+.+..
T Consensus 82 ~~-~~gkyy~yys~~----~~~~~v~~a~~p~----Gpw~~~--~~~---------~~~iDp~~f-~D~dG~~Yl~~~~~ 140 (269)
T cd09001 82 RY-HNGTFYVFFCTN----TGGTYIYTADDPE----GPWTKT--ALD---------GGYHDPSLL-FDDDGTAYLVYGGG 140 (269)
T ss_pred EE-ECCEEEEEEEec----CCCeEEEEcCCCC----CCCcCC--CcC---------CCcccCceE-EcCCCCEEEEeCCC
Confidence 76 499999999975 2346788887763 245532 111 145799955 44789999999753
Q ss_pred eCCcceEEEEE-eCCCCCcEEcccccccCC--CCCeeeeCcEEEeccCCccceeeccCCCceeeEEEEeeC
Q 013412 214 IDNEGMAFVYW-SWDFIHWTKLDHPLYSVQ--ETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (443)
Q Consensus 214 ~~~~G~i~lY~-S~Dl~~W~~~g~~l~~~~--~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vL~~s~~ 281 (443)
.+.+.+ +.|+....-....+.... .....|-|.+++-+ | +++|++|..
T Consensus 141 -----~i~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~Egp~i~k~~--G-------------~YYl~~S~~ 191 (269)
T cd09001 141 -----TIRLVELSPDLTGVGGKDQVIIDAGEEIGLGAEGSHLYKIN--G-------------YYYIFNIAW 191 (269)
T ss_pred -----cEEEEEECcccCCcCCCceEEEeCCCccccccccCeEEEEC--C-------------EEEEEEecC
Confidence 233443 567665521111122111 13468999999875 4 788888875
No 35
>cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function. This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.08 E-value=2.5e-09 Score=104.77 Aligned_cols=98 Identities=17% Similarity=0.242 Sum_probs=75.2
Q ss_pred eeEEEcCCCeEEEEEccccCCCceeEEEEEecCCCCCCcceeEEecCCceEeC--CCCCCCCCCCCCEEEeecCCCeEEE
Q 013412 131 GSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTP--PNGVKDDMFRDPTTAWQAPDGRWRV 208 (443)
Q Consensus 131 Gsav~~~dg~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~--p~~~~~~~fRDP~Vvw~~~~g~~~M 208 (443)
..++. .||+++|+|++........+++|+|+|+ ++|++.+ +|++.+ ....+...++||.|+ + .+|+|+|
T Consensus 3 P~v~~-~~G~y~l~y~~~~~~~~~~ig~A~S~Dg-----~~~~~~~-~~~i~p~~~~~~~~~gv~dP~v~-~-~~g~y~m 73 (268)
T cd08993 3 PAVVY-DNGEFYLLYRAAGNDGVIRLGLARSRDG-----LHFEIDP-DPPVWPPPEDGFEEGGVEDPRIV-K-IDDTYYI 73 (268)
T ss_pred CeEEE-ECCEEEEEEEEECCCCceEEEEEEECCC-----ceEEECC-cceEcCCCCCcccccCccCcEEE-E-ECCEEEE
Confidence 45555 5999999999875556678999999996 7999975 565533 223456789999965 4 4789999
Q ss_pred EEeeee--CCcceEEEEEeCCCCCcEEcccc
Q 013412 209 LVGGQI--DNEGMAFVYWSWDFIHWTKLDHP 237 (443)
Q Consensus 209 v~ga~~--~~~G~i~lY~S~Dl~~W~~~g~~ 237 (443)
++++.. .....+.+++|+|+.+|++.+.+
T Consensus 74 ~Yta~~~~~~~~~i~lA~S~D~~~W~~~~~~ 104 (268)
T cd08993 74 TYAARPNAPNGTRIGLATTKDFITFERLGTS 104 (268)
T ss_pred EEEccCCCCCCcEEEEEEeCCcceEEEeccc
Confidence 998865 23457889999999999998753
No 36
>cd08980 GH43_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.07 E-value=1e-08 Score=101.48 Aligned_cols=188 Identities=15% Similarity=0.129 Sum_probs=118.1
Q ss_pred CCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCC--CCCC-ccCCCCeEeeeEEEcCCCeEEEEE
Q 013412 69 DPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHAL--CPSG-PYDINSCWSGSVTILPGDKPFILY 145 (443)
Q Consensus 69 DPnG~~y~~G~YHlFyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~aL--~P~~-~~D~~gv~SGsav~~~dg~~~l~Y 145 (443)
||. ++..+++|+|++.-.. .....++|+||+||+.....+ .+.. .....++|.+.++. .+|+++|+|
T Consensus 2 DP~-v~~~~d~yY~~~T~~~--------~~~~i~~S~dl~~w~~~~~~~~~~~~~~~~~~~~~WAP~i~~-~~g~yylyy 71 (288)
T cd08980 2 DPW-VIRHDGYYYFTATTGE--------DRIELRRSDTLAGLATAESKVVWTPPDSGPYSGNLWAPELHY-IDGKWYIYF 71 (288)
T ss_pred CCe-EEEECCEEEEEEEeCC--------CcEEEEecCChhHhhcCCcEEEecCCCCCCccccEECceEEE-ECCEEEEEE
Confidence 888 8888999999986331 247789999999999875332 2221 12346789999876 599999999
Q ss_pred ccccC--CCceeEEEEEecCCCCCCcceeEEecCCceEeCCCCCCCCCCCCCEEEeecCCCeEEEEEeeeeC---CcceE
Q 013412 146 TGIDA--SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID---NEGMA 220 (443)
Q Consensus 146 Tg~~~--~~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~~~---~~G~i 220 (443)
+.... ...+.+++|++++..++ +..|+.. .+++... + ..--||.++ .+ +|++||+++.... ....+
T Consensus 72 s~~~~~~~~~~~~~v~~a~~~~~~-~Gpw~~~--~~~~~~~-~---~~~iDp~~~-~d-dG~~Yl~~~~~~~~~~~~~~i 142 (288)
T cd08980 72 AAGDGGGNANHRMYVLENAGADPP-TGPWTFK--GRLADPT-D---RWAIDGTVF-EH-NGQLYFVWSGWEGRTNGNQNL 142 (288)
T ss_pred EccCCCCCcceeEEEEEeCCCCCC-CCCceEe--eEeccCC-C---CeeeeeEEE-EE-CCEEEEEEEccCCCCCCCccE
Confidence 97653 23456778888752112 2578874 2443211 1 234799954 53 5999999875432 12234
Q ss_pred EEEEeCCCCCcEEcccc--cccCCC------CCeeeeCcEEEeccCCccceeeccCCCceeeEEEEeeCCCceeEEEEEE
Q 013412 221 FVYWSWDFIHWTKLDHP--LYSVQE------TGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLGT 292 (443)
Q Consensus 221 ~lY~S~Dl~~W~~~g~~--l~~~~~------~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vL~~s~~~~~~~~Y~vG~ 292 (443)
.+.+.++...+. +.+ +..+.. ....|-|.+++.+ | +++|++|........|.+|-
T Consensus 143 ~~~~l~~~~~~~--g~~~~i~~p~~~we~~~~~~~EgP~~~k~~--G-------------~yYl~yS~~~~~~~~Y~v~~ 205 (288)
T cd08980 143 YIAKMSNPWTLT--GPRVLISRPEYDWERQGPGVNEGPAALKRN--G-------------KVFLTYSASGSWTPDYCLGL 205 (288)
T ss_pred EEEECCCCCccC--CcceEecCCCCCceecCceeeECcEEEEEC--C-------------EEEEEEECCCCCCCCCEEEE
Confidence 555555433343 322 222111 1357999999997 5 78888887544345576664
No 37
>cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs
Probab=99.04 E-value=8e-09 Score=102.09 Aligned_cols=122 Identities=18% Similarity=0.238 Sum_probs=86.0
Q ss_pred CccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCccCCCCeEeeeEEEcCCCeEEEEE
Q 013412 66 WINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILY 145 (443)
Q Consensus 66 w~NDPnG~~y~~G~YHlFyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~Y 145 (443)
..-||. +++.+|+|+|+.... .+ ...+...+|+||+||+.++.++.+. ..++|.+.++. .+|+++|+|
T Consensus 14 ~~~DP~-i~~~~~~yY~~~t~~----~~--~~gi~i~~S~DL~~W~~~g~~~~~~----~~~~WAP~i~~-~~gkyy~yy 81 (280)
T cd09002 14 DYPDPS-ILRDGEDYYMTHSSF----KY--TPGLVIWHSRDLVNWTPVGPALPEY----EGDVWAPDLCK-YDGRYYIYF 81 (280)
T ss_pred CCCCCE-EEEECCEEEEEEcch----hc--CCCEEEEECCCcCCceEccccccCC----CCCEEcCeeEE-ECCEEEEEE
Confidence 345997 899999999976421 11 2357888999999999998877542 35789998876 699999999
Q ss_pred ccccCCCceeEEEEEecCCCCCCcceeEEecCCceEeCCCCCCCCCCCCCEEEeecCCCeEEEEEeee
Q 013412 146 TGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQ 213 (443)
Q Consensus 146 Tg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~ 213 (443)
+.........+.+|++++... .|++ |+... ....-||.+++. +||++||+.+..
T Consensus 82 s~~~~~~~~~~~va~ad~p~G----pw~~----~~~~~-----~~~~IDp~vf~D-ddG~~Yl~~~~~ 135 (280)
T cd09002 82 PAIPEGGNWTNMVIWADSPEG----PWSK----PIDLK-----IGGCIDPGHVVD-EDGNRYLFLSGG 135 (280)
T ss_pred EeecCCCCceEEEEEECCCCC----CCcC----CEecC-----CCCccCCceEEc-CCCCEEEEECCe
Confidence 986544456678999877643 4653 33111 122369996554 789999998643
No 38
>cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases. The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr
Probab=98.93 E-value=5.3e-08 Score=95.15 Aligned_cols=201 Identities=15% Similarity=0.295 Sum_probs=128.1
Q ss_pred eecCCCC---ccCCCcceEECCEEEEEEEECCCCCCCCCCceEE-EEEeCCCcccEeccCCCC----CCCccCCCCeEee
Q 013412 60 FRPPQNW---INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWA-HSVSYDLINWIHLSHALC----PSGPYDINSCWSG 131 (443)
Q Consensus 60 ~~p~~gw---~NDPnG~~y~~G~YHlFyQ~~P~~~~~g~~~~Wg-ha~S~Dlv~W~~~~~aL~----P~~~~D~~gv~SG 131 (443)
..|+.|| +.||- +++++|+||+|-..+.. ..|+ ...| |++|+.++.|+. +.. ...+.|.+
T Consensus 14 ~~pk~~~~~~lkDPt-iv~~nGkYyvYgT~~~~-------~~~~s~~~S--f~~Ws~~g~A~q~~l~~~~--~~~~fwAP 81 (303)
T cd08987 14 ISPKSDWIVAIKDPT-VVYYNGRYHVYATTADA-------GNYGSMYFN--FTDWSQAASATQYYLQNGN--MTGYRVAP 81 (303)
T ss_pred ccCCCCCeeeecCCe-EEEECCEEEEEEccCCC-------CCceeeeec--ccCHhHhccchhhcccCCC--CCcccccC
Confidence 4577899 57998 78888999999765431 2243 3445 999999887662 221 23457888
Q ss_pred eEEE-cCCCeEEEEEccccCCCceeEEEEEecCCCCCCcceeEEecCCceEeCCCCCCCCCCCCCEEEeecCCCeEEEEE
Q 013412 132 SVTI-LPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLV 210 (443)
Q Consensus 132 sav~-~~dg~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~~~g~~~Mv~ 210 (443)
.++. .+++++||+|+.. ..++|+|+|..+|+ .|... .|++...........-|++|+ . .+++.||+.
T Consensus 82 qVfyf~pk~kwYL~Yq~~------~~~yaTs~dp~~P~--~ws~~--qpl~~~~~~~~~~~~ID~~vI-~-Dd~~~YLff 149 (303)
T cd08987 82 QVFYFAPQNKWYLIYQWW------PAAYSTNSDISNPN--GWSAP--QPLFSGTPNGSPGGWIDFWVI-C-DDTNCYLFF 149 (303)
T ss_pred EEeeeccCCEEEEEEecC------ceEEEeCCCCCCCC--ccCCC--cccccCcccCCCCCccceeEE-e-CCCCEEEEE
Confidence 8763 3589999999941 24689999988875 67753 577643222223456899974 3 578888888
Q ss_pred eeeeCCcceEEEEEeC-CCCCcEEc-cc---ccccCCCCCeeeeCcEEEeccCCccceeeccCCCceeeEEEEeeCCCce
Q 013412 211 GGQIDNEGMAFVYWSW-DFIHWTKL-DH---PLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKH 285 (443)
Q Consensus 211 ga~~~~~G~i~lY~S~-Dl~~W~~~-g~---~l~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vL~~s~~~~~~ 285 (443)
... .| .||+|+ .+.+.... +. .+........+|-|++++++ | ..+++|+++..+...
T Consensus 150 ~~d---nG--~iyra~~~~~nFp~~~~~~~~~~~~~~~~~lfEa~~Vykv~--G-----------~~~YlmiveA~g~~~ 211 (303)
T cd08987 150 SDD---NG--KLYRSSTTLGNFPNGGTETVIIMSDSNKNNLFEASNVYKVK--G-----------QNQYLLIVEAIGSDG 211 (303)
T ss_pred ecC---CC--eEEEEecchhhCCCCCCccEEEecCCCccccceeeEEEEEC--C-----------CeEEEEEEEecCCCC
Confidence 543 34 588873 22222110 11 11111234579999999997 5 238999999876545
Q ss_pred eEEEEEEEeCC--CCeeccC
Q 013412 286 DYYVLGTYDPQ--MDIFSPD 303 (443)
Q Consensus 286 ~~Y~vG~~d~~--~~~F~p~ 303 (443)
..|+++ +..+ .+.|+|.
T Consensus 212 ~rYfrs-~Ts~Sl~GpWt~~ 230 (303)
T cd08987 212 GRYFRS-WTATSLDGPWTPL 230 (303)
T ss_pred CCeEEE-EEcCCCCCCceec
Confidence 578888 5322 2455544
No 39
>cd08982 GH43_3 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.89 E-value=7.5e-08 Score=95.96 Aligned_cols=173 Identities=18% Similarity=0.221 Sum_probs=103.9
Q ss_pred cCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCccCCCCeEeeeEEEcCCCeEEEEEcc
Q 013412 68 NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTG 147 (443)
Q Consensus 68 NDPnG~~y~~G~YHlFyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~YTg 147 (443)
.||. ++.++|+|+|+-... + +..+|+||++|+..+.++. ..++|.++++. .+|++|++|+.
T Consensus 4 ~DP~-i~~~~g~YY~~~T~~------~-----~i~~S~DL~~W~~~g~~~~------~~~~WAP~i~~-~~g~~Y~~~~~ 64 (295)
T cd08982 4 ADPV-VILFKGEYYLFASMS------G-----GYWHSSDLIDWDFIPTNSL------PDEGYAPAVFV-YDGTLYYTAST 64 (295)
T ss_pred CCCe-EEEECCEEEEEEeCC------C-----CeEECCCcCCceECCcccC------CCCcCcCEEEE-ECCEEEEEEeC
Confidence 6998 788899999885431 1 2578999999999988763 45789999876 58886665553
Q ss_pred ccCCCceeEEEEEecCCCCCCcceeEEecCCceEeCCCCCCCCCCCCCEEEeecCCCeEEEEEeeeeCC-----------
Q 013412 148 IDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN----------- 216 (443)
Q Consensus 148 ~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~~~~----------- 216 (443)
. .+.+|+|+|...+ .|+.. .+ . ......||.++ .+.||+.||+.|.....
T Consensus 65 ~------~~~v~~s~~p~gp---~w~~~--~~----~---~~~~~IDp~vf-~DdDGk~Yl~~g~~~~~~i~~~eL~~d~ 125 (295)
T cd08982 65 Y------NSRIYKTADPLSG---PWEEV--DK----S---FPPGLADPALF-IDDDGRLYLYYGCSNNYPLRGVEVDPDT 125 (295)
T ss_pred C------CceEEEeCCCCCC---Ccccc--cc----c---cCCCccCCceE-ECCCCCEEEEEecCCCCCeEEEEECccc
Confidence 2 2357888776322 25432 01 1 11345799954 54789999998753210
Q ss_pred ---cc-eEEEE-EeCCCCCcEEcccccccCCCCCeeeeCcEEEeccCCccceeeccCCCceeeEEEEeeCCCceeEEEEE
Q 013412 217 ---EG-MAFVY-WSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLG 291 (443)
Q Consensus 217 ---~G-~i~lY-~S~Dl~~W~~~g~~l~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vL~~s~~~~~~~~Y~vG 291 (443)
.| ...++ .+..-..|+..+.-.......+..|-|-+++-+ | +++|++|........|.+|
T Consensus 126 ~~~~g~~~~l~~~~~~~~~We~~g~~~~~~~~~~~~EGP~i~k~~--G-------------~YYL~yS~~~~~~~~Y~v~ 190 (295)
T cd08982 126 FRPIGEPVELIPGNPDKHGWERFGENNDNPDKTPWMEGAWMTKHN--G-------------KYYLQYAAPGTEFNTYADG 190 (295)
T ss_pred CCccCcceEEEeCCCCCcCeEecCcccccccCCccccccEEEEEC--C-------------EEEEEEeCCCcccCcEeEE
Confidence 01 01111 122234565543211111123457889888865 4 8888888754333446655
Q ss_pred EE
Q 013412 292 TY 293 (443)
Q Consensus 292 ~~ 293 (443)
-.
T Consensus 191 ~a 192 (295)
T cd08982 191 VY 192 (295)
T ss_pred EE
Confidence 43
No 40
>PF02435 Glyco_hydro_68: Levansucrase/Invertase; InterPro: IPR003469 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This family consists of the glycosyl hydrolase 68 family (GH68 from CAZY), including several bacterial levansucrase enzymes, and invertase from Zymomonas. Levansucrase (2.4.1.10 from EC), also known as beta-D-fructofuranosyl transferase, catalyses the conversion of sucrose and (2,6-beta-D-fructosyl)(N) to glucose and (2,6-beta-D-fructosyl)(N+1), where other sugars can also act as fructosyl acceptors. Invertase, or extracellular sucrase (3.2.1.26 from EC), catalyses the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.; GO: 0050053 levansucrase activity, 0009758 carbohydrate utilization; PDB: 2YFR_A 2YFT_A 2YFS_A 1W18_A 3OM7_B 3OM4_C 3OM6_D 3OM5_A 3OM2_A 1PT2_A ....
Probab=98.82 E-value=2.2e-07 Score=95.30 Aligned_cols=194 Identities=18% Similarity=0.168 Sum_probs=118.7
Q ss_pred cCCCcceE-ECCEEEEEEEECCCC----CCCCCCceEEEEEeCCCc----ccEeccCCCCCCCcc-CCCCeEeeeEEEcC
Q 013412 68 NDPNGPMY-YKGVYHLFYQYNPLG----PLFGDKMIWAHSVSYDLI----NWIHLSHALCPSGPY-DINSCWSGSVTILP 137 (443)
Q Consensus 68 NDPnG~~y-~~G~YHlFyQ~~P~~----~~~g~~~~Wgha~S~Dlv----~W~~~~~aL~P~~~~-D~~gv~SGsav~~~ 137 (443)
-|+.|-+. ++|.--+|-.-.|.. ..++ ..|+++.-|++.. +|+..+.++...... ....-|||||++..
T Consensus 63 qd~~G~~~~~~Gy~vvfaL~a~r~~~~~~Rh~-~A~I~~fY~k~G~~~~~~W~~~G~vf~~g~~~~~~s~EWSGSA~l~~ 141 (428)
T PF02435_consen 63 QDADGNVVNYNGYQVVFALTADRHEDPDDRHD-DARIYLFYSKDGDNANDGWKNGGPVFPEGASFVPGSREWSGSATLNN 141 (428)
T ss_dssp E-TTSSBEEBTTEEEEEEEEE-TT--GGGCSC-GEEEEEEEEETT--SGGG-EEEEESS-TTCCCCGCEEEEEEEEEEST
T ss_pred ecccccEEEECCEEEEEEEecCCccCCccccC-CcEEEEEEecCCCCccCCceECcccCCCCCCCCccCcEecCceEEcC
Confidence 46777444 799555666665543 2455 7899999999998 999999877554431 22346999999986
Q ss_pred -CCeEEEEEccccC----CCceeE-----EEEEecCCCCCCcceeEEecCCceEeCCCCCC-------CCCCCCCEEEee
Q 013412 138 -GDKPFILYTGIDA----SGQQVQ-----NLAMPENLSDPLLKDWVKFSGNPVMTPPNGVK-------DDMFRDPTTAWQ 200 (443)
Q Consensus 138 -dg~~~l~YTg~~~----~~~~~q-----~lA~s~D~~d~~l~~w~k~~~nPvi~~p~~~~-------~~~fRDP~Vvw~ 200 (443)
||++.||||.... ...|+. +++.+.+. .-.+..|+++ ..++.++..++ ...||||++|-.
T Consensus 142 ~dg~I~LfYTav~~~~~~~~~Q~l~t~~~g~~~~d~~-~v~i~g~~~~--~~lfe~DG~~Yqt~~Q~~~~afRDP~~f~D 218 (428)
T PF02435_consen 142 DDGSIQLFYTAVGFSDTPTFRQRLATATLGLIHADDD-GVWITGFSNH--HELFEGDGKHYQTYEQNPGYAFRDPHVFED 218 (428)
T ss_dssp TTSEEEEEEEEEEEETTTTTEEEEEEEEEEEEEECST-EEEEEEEEEE--EEEES--SSSB--HHHHHH---EEEEEEEE
T ss_pred CCCeEEEEEeecccCCCcchhhhhhhHhcCeeecCCC-ceeEccccce--eEeeccchhhhhChhhcCCccccCCeeEEC
Confidence 7999999998643 123332 23333332 1122344443 35555443222 247999996544
Q ss_pred cCCCeEEEEEeeee---C------------------------------CcceEEEEEeCC--CCCcEEcccccccCCCCC
Q 013412 201 APDGRWRVLVGGQI---D------------------------------NEGMAFVYWSWD--FIHWTKLDHPLYSVQETG 245 (443)
Q Consensus 201 ~~~g~~~Mv~ga~~---~------------------------------~~G~i~lY~S~D--l~~W~~~g~~l~~~~~~~ 245 (443)
..+|+-||+.-+.. + ..|+|.|.+.+| +..|+....++.+..-..
T Consensus 219 P~~G~~YLvFEgNtg~~~~~~~~g~~d~~~~~~~~~~~~~~~~~~A~~~ng~iGi~~~~~~~~~~w~~~~PL~~a~~v~d 298 (428)
T PF02435_consen 219 PEDGKRYLVFEGNTGGERNWANYGGDDLGNVPGDPKLENNDNKSGASYANGAIGIAKLTNDDGTVWELLPPLLSANGVND 298 (428)
T ss_dssp TTTTEEEEEEEEEBSTTSBGGGT-SHHHHHHHHHHHHHHSCCHHHHHH-EEEEEEEEESTTTTSEEEEEEEEEEETTTBS
T ss_pred CCCCcEEEEEecccCCCCCccccCccccccccccccccccccccccceecceeeeEEecCCCCCccEEeCcceecccccc
Confidence 37899999884321 0 146777887644 568999875555444456
Q ss_pred eeeeCcEEEeccCCccceeeccCCCceeeEEEEee
Q 013412 246 MWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSL 280 (443)
Q Consensus 246 ~wECPdlf~l~~~g~~g~~~~~~~~~~k~vL~~s~ 280 (443)
..|-|+++.++ | ||+|+.+.
T Consensus 299 e~ERP~iv~~~--g-------------kyYLFt~s 318 (428)
T PF02435_consen 299 ELERPHIVFMN--G-------------KYYLFTIS 318 (428)
T ss_dssp -EEEEEEEEET--T-------------EEEEEEEE
T ss_pred cccCCcEEEEC--C-------------EEEEEEEe
Confidence 89999999998 6 88888654
No 41
>COG2152 Predicted glycosylase [Carbohydrate transport and metabolism]
Probab=98.75 E-value=8.8e-08 Score=93.49 Aligned_cols=147 Identities=20% Similarity=0.278 Sum_probs=110.2
Q ss_pred cceEECCEEEEEEEE------CCCCCCCCCCceEEEEEeCCCcc-cEec-cCCCCC-CCccCCCCeEeeeEEEcCCCeEE
Q 013412 72 GPMYYKGVYHLFYQY------NPLGPLFGDKMIWAHSVSYDLIN-WIHL-SHALCP-SGPYDINSCWSGSVTILPGDKPF 142 (443)
Q Consensus 72 G~~y~~G~YHlFyQ~------~P~~~~~g~~~~Wgha~S~Dlv~-W~~~-~~aL~P-~~~~D~~gv~SGsav~~~dg~~~ 142 (443)
|+++.++++||+|+- .+. . ..|.+.|.|+|+++ |+-. .+.+.| ..+++..||....++. .|++++
T Consensus 35 av~~~~~~~~~l~Rv~~~yye~~~----~-~s~l~ia~s~dgi~~~~~e~ep~~~P~~~~~e~~G~EDPRvt~-I~~~y~ 108 (314)
T COG2152 35 AVVLVGGELLLLYRVVEGYYEDHS----S-ISHLRIARSDDGIGEFEIEPEPTLWPANYPYEIYGIEDPRVTK-IGGRYY 108 (314)
T ss_pred eeEEECCEEEEEEEEeccccccCc----c-ceEEEEEecccCCCceecCCcceEecCCCchhhhcccCceEEE-ECCEEE
Confidence 588899999999987 222 2 57899999999999 9976 567889 5677889999999987 499999
Q ss_pred EEEccccCCCceeEEEEEecCCCCCCcceeEEecCCceEeCCCCCCCCCCCCCEEEeecCCCeEEEEEeeeeC---Ccce
Q 013412 143 ILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID---NEGM 219 (443)
Q Consensus 143 l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~~~---~~G~ 219 (443)
|.|||.+ +..+..++|+++|. .+|+|.+ +++.+ +.||-..+=...+|+|.|+---... ..+.
T Consensus 109 mtYTa~s-~~g~~~~la~t~~f-----~n~~rig--~i~~p-------dn~~~~lfP~~~ngk~~~lhr~~~~~~~~~~n 173 (314)
T COG2152 109 MTYTAYS-DKGPRLALAVTKDF-----LNWERIG--AIFPP-------DNKDAALFPKKINGKYALLHRPVLGEYGMKGN 173 (314)
T ss_pred EEEEecC-CCCcccchhhhhhh-----hhhhhcc--cccCC-------CCCCceEeeEEecCcEEEEEeecccccCccCc
Confidence 9999985 45677889999986 6899862 44422 3355442212246889988654332 2567
Q ss_pred EEEEEeCCCCCcEEcccccc
Q 013412 220 AFVYWSWDFIHWTKLDHPLY 239 (443)
Q Consensus 220 i~lY~S~Dl~~W~~~g~~l~ 239 (443)
+.+-.|+|+.+|..+..++.
T Consensus 174 iwia~S~dl~~w~~~~~~l~ 193 (314)
T COG2152 174 IWIAFSPDLEHWGIHRKLLG 193 (314)
T ss_pred eEEEEcCCccCCCccceeec
Confidence 89999999999987755443
No 42
>cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins. This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f
Probab=98.72 E-value=1.1e-07 Score=94.11 Aligned_cols=108 Identities=21% Similarity=0.263 Sum_probs=81.4
Q ss_pred cCCCcceEECCEEEEEEEECCCCC----CCCCCceEEEEEeCC-CcccEe-ccCCCCCCC-ccCCCCeEeeeEEEcCCCe
Q 013412 68 NDPNGPMYYKGVYHLFYQYNPLGP----LFGDKMIWAHSVSYD-LINWIH-LSHALCPSG-PYDINSCWSGSVTILPGDK 140 (443)
Q Consensus 68 NDPnG~~y~~G~YHlFyQ~~P~~~----~~g~~~~Wgha~S~D-lv~W~~-~~~aL~P~~-~~D~~gv~SGsav~~~dg~ 140 (443)
-+|. +++.+|+|+|||..+.... ..+ ....|.|+|+| +-+|++ ..++|.|.. .+|..++..++++...+|+
T Consensus 81 ~~P~-vi~~~g~yyl~Y~~~~~~~~~~~~~~-~~~ig~a~s~~~~g~w~~~~~pvl~~~~~~~~~~~~~~p~v~~~~~g~ 158 (291)
T cd08994 81 HNPT-IKRFDGKYYLYYIGNTDPGPRPGHRN-NQRIGVAVSDSLDGPWKRSDQPILEPRPGGWDNLITSNPAVTRRPDGS 158 (291)
T ss_pred cCCe-EEEECCEEEEEEEcccCCcccccCCC-CceEEEEEeCCCCCCcEECCCceecCCCCccccccccCCCeEEeCCCC
Confidence 3676 7788999999999765311 122 57899999999 469999 466777754 3677889999998755899
Q ss_pred EEEEEccccCC---CceeEEEEEecCCCCCCcceeEEecCCceE
Q 013412 141 PFILYTGIDAS---GQQVQNLAMPENLSDPLLKDWVKFSGNPVM 181 (443)
Q Consensus 141 ~~l~YTg~~~~---~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi 181 (443)
++|+|+|.... ..+.+++|+|+|.. .+|+|...+||+
T Consensus 159 ~~m~y~g~~~~~~~~~~~~gla~s~d~~----g~~~~~~~~~v~ 198 (291)
T cd08994 159 YLLVYKGGTYNPTKGNRKYGVAIADSPT----GPYTKVSGPPFI 198 (291)
T ss_pred EEEEEeccccCCCCCcEEEEEEEeCCCC----CCCEECCCCccc
Confidence 99999998642 35778999998863 479997656654
No 43
>cd08995 GH32_Aec43_like Glycosyl hydrolase family 32. This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a
Probab=98.67 E-value=6.8e-07 Score=87.96 Aligned_cols=128 Identities=20% Similarity=0.228 Sum_probs=85.5
Q ss_pred ceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEecc--CCCCCCCccCCCCeEeeeEEEcC-CCeEEEEEcccc
Q 013412 73 PMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLS--HALCPSGPYDINSCWSGSVTILP-GDKPFILYTGID 149 (443)
Q Consensus 73 ~~y~~G~YHlFyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~--~aL~P~~~~D~~gv~SGsav~~~-dg~~~l~YTg~~ 149 (443)
+++.+|+|||||..+... ... ....++|+|+|+++|+..+ +.+.+...++...+-.+.++.++ +|+++|+|.+..
T Consensus 67 ~~~~~g~~~l~YTg~~~~-~~~-~~~i~~A~S~D~~~w~k~~~~pv~~~~~~~~~~~~rDP~Vf~~~~~g~y~m~~g~~~ 144 (280)
T cd08995 67 VIKGEGTYHAFYTGHNLD-GKP-KQVVMHATSDDLITWTKDPEFILIADGEGYEKNDWRDPFVFWNEEEGCYWMLLATRL 144 (280)
T ss_pred EEeeCCEEEEEEEEECCC-CCC-cEEEEEEECCCCCccEECCCCeecCCccccccCCccCCcEEEcCCCCeEEEEEEecc
Confidence 667899999999875422 112 4679999999999999874 33432223333344567777653 589999997654
Q ss_pred C----CCceeEEEEEecCCCCCCcceeEEecCCceEeCCCCCCCCCCCCCEEEeecCCCeEEEEEeeee
Q 013412 150 A----SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI 214 (443)
Q Consensus 150 ~----~~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~~ 214 (443)
. .....+.++.|+|. ++|+.. .+++.+.. ...+.-|.+ ++ .+|+|+|+++.+.
T Consensus 145 ~~~~~~~~g~i~~~~S~Dl-----~~W~~~--~~~~~~~~---~~~~E~P~l-~~-~~g~~~L~~s~~~ 201 (280)
T cd08995 145 LDGPYNRRGCIALFTSKDL-----KNWEYE--EPFYAPGL---YFMPECPDL-FK-MGDWWYLVYSEFS 201 (280)
T ss_pred CCCCCCCCeEEEEEEeCCc-----Ccceec--CceecCCC---cceeecceE-EE-ECCEEEEEEEecc
Confidence 2 23345667888885 799875 45653321 234677884 45 5799999998764
No 44
>cd08983 GH43_4 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.65 E-value=4.4e-07 Score=89.54 Aligned_cols=90 Identities=22% Similarity=0.330 Sum_probs=63.9
Q ss_pred cCCceEeCCCCCCCCCCCCCEEEeecCCCeEEEEEeeee-----CCcceEEEEEeCCCCCcEEcccccccC-CCCCeeee
Q 013412 176 SGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI-----DNEGMAFVYWSWDFIHWTKLDHPLYSV-QETGMWEC 249 (443)
Q Consensus 176 ~~nPvi~~p~~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~~-----~~~G~i~lY~S~Dl~~W~~~g~~l~~~-~~~~~wEC 249 (443)
.++|||.+.. ....+|||+|++..++|+|||+..... .....|.+|+|+||++|+..+..+... ..+.+| |
T Consensus 4 ~~~pvl~~~~--g~~~~rDP~I~r~~~~g~yy~~~T~~~~~~~~~~~~~i~i~~S~DLv~W~~~~~~~~~~~~~~~~W-A 80 (276)
T cd08983 4 NGNPVLTSTA--GTKGLRDPFILRSHEGGKYYMIATDLKITGQTNGSQYIVVWESTDLVNWTFQRLVKVNPPNAGNTW-A 80 (276)
T ss_pred CCceEEeCCc--CCCCccCCeEEEcCCCCEEEEEEEecCcCCcccCCCeEEEEECCcccCCcccceeecCCCCcCcEe-C
Confidence 3689997543 357899999776546889999886542 122357899999999999887543222 234467 9
Q ss_pred CcEEEeccCCccceeeccCCCceeeEEEEeeC
Q 013412 250 PDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (443)
Q Consensus 250 Pdlf~l~~~g~~g~~~~~~~~~~k~vL~~s~~ 281 (443)
|++|..+..| +|+|.++..
T Consensus 81 Pev~~d~~~g-------------~y~~~~s~~ 99 (276)
T cd08983 81 PEAFWDAERG-------------QYVVYWSSR 99 (276)
T ss_pred ccceEcCCCC-------------eEEEEEecc
Confidence 9999987434 788887764
No 45
>cd08999 GH43_ABN_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=98.61 E-value=1.5e-06 Score=85.49 Aligned_cols=156 Identities=12% Similarity=0.092 Sum_probs=97.0
Q ss_pred cCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCc-ccEeccCCCCCCCccCCCCeEeeeEEEcCCCeEEEEEc
Q 013412 68 NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYT 146 (443)
Q Consensus 68 NDPnG~~y~~G~YHlFyQ~~P~~~~~g~~~~Wgha~S~Dlv-~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~YT 146 (443)
-.|. +++.+|+|||||..+-.. .. ....++|+|+|.. .|+..+..+... ..+..++...++++++||+++|+|.
T Consensus 63 waP~-v~~~~g~y~~~y~~~~~~--~~-~~~i~~a~s~~p~g~~~~~~~~~~~~-~~~~~~~~Dp~v~~d~dG~~Yl~~~ 137 (287)
T cd08999 63 WAPD-VSYVNGKYVLYYSARDKG--SG-GQCIGVATADSPLGPFTDHGKPPLCC-PEGEGGAIDPSFFTDTDGKRYLVWK 137 (287)
T ss_pred cCce-EEEECCEEEEEEEeecCC--CC-CEEEEEEECCCCCCCCccCCcceEec-CCCCCCccCCCeEECCCCCEEEEEe
Confidence 3455 788999999999876543 22 5779999999965 999875332210 1122446778888876899999997
Q ss_pred cccCC--CceeEEEE-EecCCCCCCcceeEEecCCceEeCCCCCCCCCCCCCEEEeecCCCeEEEEEeeee--CC--cce
Q 013412 147 GIDAS--GQQVQNLA-MPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI--DN--EGM 219 (443)
Q Consensus 147 g~~~~--~~~~q~lA-~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~~--~~--~G~ 219 (443)
+.... ..+.+.++ .+.|+ .+|+... ..++.+........+.-|.+ ++ .+|+|||++.+.. .. .=.
T Consensus 138 ~~~~~~~~~~~i~~~~ls~d~-----~~~~~~~-~~i~~~~~~~~~~~~EgP~i-~k-~~g~yyl~~S~~~~~~~~~~y~ 209 (287)
T cd08999 138 SDGNSIGKPTPIYLQELSADG-----LTLTGEP-VRLLRNDEDWEGPLVEAPYL-VK-RGGYYYLFYSAGGCCSGASTYA 209 (287)
T ss_pred ccCCCCCCCceEEEEEeCCCC-----ccccCCc-EeeecccccccCCceEeeEE-EE-ECCEEEEEEEcCCccCCCCCEE
Confidence 64321 12223444 45554 5665321 22333222223345677984 45 4899999997653 11 224
Q ss_pred EEEEEeCCCC-CcEEccc
Q 013412 220 AFVYWSWDFI-HWTKLDH 236 (443)
Q Consensus 220 i~lY~S~Dl~-~W~~~g~ 236 (443)
+.+++|+++. .|+....
T Consensus 210 i~~~~s~~~~Gpw~~~~~ 227 (287)
T cd08999 210 VGVARSKSLLGPYVKAPG 227 (287)
T ss_pred EEEEEeCCCcCCcCCCCC
Confidence 6788999987 8887543
No 46
>PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety. On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B.
Probab=98.59 E-value=7.1e-07 Score=89.63 Aligned_cols=104 Identities=14% Similarity=0.194 Sum_probs=79.1
Q ss_pred CCCeEeeeEEEcCCCe--EEEEEccccCCCce-eEEEEEecCCCCCCcceeEEecCCceEeCCCCCCCCCCCCCEEEeec
Q 013412 125 INSCWSGSVTILPGDK--PFILYTGIDASGQQ-VQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQA 201 (443)
Q Consensus 125 ~~gv~SGsav~~~dg~--~~l~YTg~~~~~~~-~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~ 201 (443)
...+|-..|++. +|+ ++++|.+....... .+++|.|+|+ .+|++. .+||+.+...++.....||-|+..
T Consensus 29 ~~~vfNpgai~~-~~~~R~~l~yr~~~~~~~~~~iglA~S~DG-----i~f~~~-~~pil~P~~~~e~~GvEDPRVt~i- 100 (312)
T PF04041_consen 29 PNAVFNPGAIVF-DGGLRVYLLYRAYGSDIGSSRIGLARSDDG-----IHFERD-PEPILYPDTDYEEWGVEDPRVTKI- 100 (312)
T ss_dssp SSEEEEEEEEEE-TTE--EEEEEEEEESSSSEEEEEEEEESSS-----SS-EE--SS-SBEE-SSTTHTEEEEEEEEEE-
T ss_pred cceEEcCcEEEE-CCeeEEEEEEEeECCCCceeEEEEEEccCC-----cCceEC-CCCEEccCCCCcccCccceeEEEE-
Confidence 457999999865 555 88888876554444 8999999997 799886 579997666666678899997755
Q ss_pred CCCeEEEEEeeeeCCcceEEEEEeCCCCCcEEcccc
Q 013412 202 PDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHP 237 (443)
Q Consensus 202 ~~g~~~Mv~ga~~~~~G~i~lY~S~Dl~~W~~~g~~ 237 (443)
+++|||++.+.......+.+.+|+|+.+|+..+..
T Consensus 101 -~d~yymtYta~~~~~~~~~la~s~D~~~~~r~g~~ 135 (312)
T PF04041_consen 101 -DDTYYMTYTAYSGKGPRIGLATSKDFKHWERHGKI 135 (312)
T ss_dssp -TTEEEEEEEEEESSSEEEEEEEESSSSSEEEEECT
T ss_pred -CCEEEEEEEEecCCCcccceEEccchHhhEEeccc
Confidence 67999999887655557789999999999998753
No 47
>cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F. This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma
Probab=98.58 E-value=2e-06 Score=83.35 Aligned_cols=157 Identities=15% Similarity=0.139 Sum_probs=98.3
Q ss_pred CCCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCccCCCCeEeeeEEEcCCCeEEE
Q 013412 64 QNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFI 143 (443)
Q Consensus 64 ~gw~NDPnG~~y~~G~YHlFyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l 143 (443)
.+-+-+|. +++.+|+|+|||.....+ .. ..+.+.|+|+|+.+|....... +.. ....++..++++.++||+++|
T Consensus 56 ~~~~waP~-v~~~~g~yyl~y~~~~~~--~~-~~~i~~a~s~d~~g~~~~~~~~-~~~-~~~~~~iDp~vf~d~dg~~yl 129 (271)
T cd08978 56 SGGLWAPE-VIYYEGKYYLYYSVSDFD--YN-GSGIGVATSEDPTGPFEDKVIR-PPT-SNNGNSIDPTVFKDDDGKYYL 129 (271)
T ss_pred CCceeCCe-EEEECCEEEEEEEcccCC--CC-cccEEEEECCCCCCCccccccC-cCc-cCCCCccCcceEEcCCCCEEE
Confidence 45567888 899999999999987642 22 5679999999999997754211 111 123467889998876699999
Q ss_pred EEccccCC-CceeEEEEEecCCCCCCcceeEEecCCceEeCCCCCCCCCCCCCEEEeecCCCeEEEEEeeeeC--CcceE
Q 013412 144 LYTGIDAS-GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID--NEGMA 220 (443)
Q Consensus 144 ~YTg~~~~-~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~~~--~~G~i 220 (443)
+|.+.... ....+.++.+++.. .+.. ..+++..........+..|.+ ++ .+|+|||++.+... ..-.+
T Consensus 130 ~~~~~~~~~~~~~i~~~~l~~~~-----~~~~--~~~~~~~~~~~~~~~~EgP~~-~k-~~g~yyl~ys~~~~~~~~y~~ 200 (271)
T cd08978 130 YYGSGDPGAGFGGIYISELTDDL-----TKPT--GPPVLSASSGNNNAVTEGPTI-FK-KNGYYYLTYSANGTGDYGYNI 200 (271)
T ss_pred EEecccCCCCCCcEEEEEECccc-----cccc--CCceeeeeeccCCCceEccEE-EE-ECCEEEEEEEeCCCCCCCceE
Confidence 99875321 23345566665532 2222 233321111112235678984 55 47999999876532 22356
Q ss_pred EEEEeCCCC-CcEEcc
Q 013412 221 FVYWSWDFI-HWTKLD 235 (443)
Q Consensus 221 ~lY~S~Dl~-~W~~~g 235 (443)
.+.+|++.. -|+..+
T Consensus 201 ~~~~s~~~~Gp~~~~~ 216 (271)
T cd08978 201 GYATSDSIDGPYVKKG 216 (271)
T ss_pred EEEECCCCCCCcCcCC
Confidence 678888874 466543
No 48
>cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of
Probab=98.55 E-value=5.8e-06 Score=81.20 Aligned_cols=151 Identities=13% Similarity=0.037 Sum_probs=94.6
Q ss_pred CccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCc-ccEeccCC-CCCCCccCCCCeEeeeEEEcCCCeEEE
Q 013412 66 WINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHLSHA-LCPSGPYDINSCWSGSVTILPGDKPFI 143 (443)
Q Consensus 66 w~NDPnG~~y~~G~YHlFyQ~~P~~~~~g~~~~Wgha~S~Dlv-~W~~~~~a-L~P~~~~D~~gv~SGsav~~~dg~~~l 143 (443)
-+--|. +++.+|+|||||..... .+ ....++|+|+|.. .|+..... +.+ ...+...+..+++++++||+++|
T Consensus 63 ~~wAP~-i~~~~g~yy~yy~~~~~---~~-~~~igva~s~~p~Gpw~~~~~~~~~~-~~~~~~~~iDp~vf~d~dG~~yl 136 (274)
T cd08990 63 QAWAPD-VVEKNGKYYLYFPARDK---DG-GFAIGVAVSDSPAGPFKDAGGPILIT-TPSGGWYSIDPAVFIDDDGQAYL 136 (274)
T ss_pred CcCcCe-EEEECCEEEEEEEeecC---CC-ceEEEEEEeCCCCCCCCCCCCccccc-cCCCCCCccCCcEEECCCCCEEE
Confidence 344566 88999999999987643 22 5789999999976 79987543 322 22233456788888877899999
Q ss_pred EEccccCCCceeEEEE-EecCCCCCCcceeEEecCCceEeCC---CCCCCCCCCCCEEEeecCCCeEEEEEeeeeCCcce
Q 013412 144 LYTGIDASGQQVQNLA-MPENLSDPLLKDWVKFSGNPVMTPP---NGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGM 219 (443)
Q Consensus 144 ~YTg~~~~~~~~q~lA-~s~D~~d~~l~~w~k~~~nPvi~~p---~~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~~~~~G~ 219 (443)
+|.+. +.+.++ .+.|. .+|+.. ..+|..+ .......+.-|.+ ++ .+|+|||++++.. ...
T Consensus 137 ~~~~~-----~~~~~~~l~~d~-----~~~~~~--~~~i~~~~~~~~~~~~~~EgP~i-~k-~~G~YYl~yS~~~--~~~ 200 (274)
T cd08990 137 YWGGG-----LGLRVAKLKPDM-----LSLKGE--PVEIVITDGAGDELRRFFEAPWV-HK-RNGTYYLSYSTGD--PEE 200 (274)
T ss_pred EECCc-----CCEEEEEeCccc-----cccCCC--cEEEEeccccCCCCCCcccceeE-EE-ECCEEEEEEECCC--CcE
Confidence 99863 223344 44443 566532 1233211 1111223457884 55 5899999998753 345
Q ss_pred EEEEEeCCCC-CcEEccccc
Q 013412 220 AFVYWSWDFI-HWTKLDHPL 238 (443)
Q Consensus 220 i~lY~S~Dl~-~W~~~g~~l 238 (443)
+.+.+|+++. .|+..+.++
T Consensus 201 ~~~a~s~~p~GP~~~~g~~~ 220 (274)
T cd08990 201 IAYATSDSPLGPFTYRGVIL 220 (274)
T ss_pred EEEEEcCCCCCCcccCcEEe
Confidence 5666888774 576655433
No 49
>cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=98.55 E-value=8.4e-06 Score=80.70 Aligned_cols=153 Identities=16% Similarity=0.166 Sum_probs=92.3
Q ss_pred ccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCc-ccEeccCCCCCCCccCCCCeEeeeEEEcCCCeEEEEE
Q 013412 67 INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILY 145 (443)
Q Consensus 67 ~NDPnG~~y~~G~YHlFyQ~~P~~~~~g~~~~Wgha~S~Dlv-~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~Y 145 (443)
+-.|. +++.+|+|||||...... -. ....++|+|+|.. .|+..+..+.+.+ .....++++.++||+++|+|
T Consensus 55 ~waP~-v~~~~g~yyl~ys~~~~~--~~-~~~i~~a~s~~p~gp~~~~~~~~~~~~----~~~iD~~vf~d~dG~~yl~~ 126 (294)
T cd08991 55 FWAPE-VYYYNGKFYMYYSANDRD--EK-TEHIGVAVSDSPLGPFRDIKKPPIDFE----PKSIDAHPFIDDDGKPYLYY 126 (294)
T ss_pred EEccE-EEEECCEEEEEEEeccCC--CC-cceEEEEEeCCCCCCCCcCCCCcccCC----CcccCCceEECCCCCEEEEE
Confidence 44677 889999999999876432 12 5789999999977 7887654333322 23467888887779999999
Q ss_pred ccccCCC--ceeEEEEEecCCCCCCcceeEEec---CCceEeC-------C-C---CCCCCCCCCCEEEeecCCCeEEEE
Q 013412 146 TGIDASG--QQVQNLAMPENLSDPLLKDWVKFS---GNPVMTP-------P-N---GVKDDMFRDPTTAWQAPDGRWRVL 209 (443)
Q Consensus 146 Tg~~~~~--~~~q~lA~s~D~~d~~l~~w~k~~---~nPvi~~-------p-~---~~~~~~fRDP~Vvw~~~~g~~~Mv 209 (443)
+...... ......+.+.|. .+|.... ..|+..+ + . ..+.....-|.+ ++ .+|+|||+
T Consensus 127 ~~~~~~~~~~~i~~~~l~~d~-----~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~EgP~~-~k-~~g~yyl~ 199 (294)
T cd08991 127 SRNNYGNRVSDIYGTELVDDK-----LSIKTELVGPPIPVSAPGIDEIFERWRFGEGKDWRTNEGPTV-LK-HNGRYYLT 199 (294)
T ss_pred EecCCCCcccceEEEEEccce-----eeeccceeeccccccccccccccccccccccccCceeeCcEE-EE-ECCEEEEE
Confidence 8653221 233445566664 3443211 1122111 0 0 011123456774 45 47899999
Q ss_pred EeeeeC-Ccc-eEEEEEeCCC-CCcEEc
Q 013412 210 VGGQID-NEG-MAFVYWSWDF-IHWTKL 234 (443)
Q Consensus 210 ~ga~~~-~~G-~i~lY~S~Dl-~~W~~~ 234 (443)
+.+..- ... .+.+.+|+++ -.|+..
T Consensus 200 ys~~~~~~~~y~~~~a~s~~~~gp~~~~ 227 (294)
T cd08991 200 YSANHYENEDYGVGYATADSPLGPWTKY 227 (294)
T ss_pred EECCCCCCCCceEEEEEcCCCCCCcEec
Confidence 875431 111 4566788874 689875
No 50
>cd08986 GH43_7 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.50 E-value=1.3e-06 Score=85.81 Aligned_cols=121 Identities=15% Similarity=0.088 Sum_probs=71.1
Q ss_pred CCCCEEEeecCCCeEEEEEeeeeC---------CcceEEEEEeCCCCCcEEcccccccCC--------------CCCeee
Q 013412 192 FRDPTTAWQAPDGRWRVLVGGQID---------NEGMAFVYWSWDFIHWTKLDHPLYSVQ--------------ETGMWE 248 (443)
Q Consensus 192 fRDP~Vvw~~~~g~~~Mv~ga~~~---------~~G~i~lY~S~Dl~~W~~~g~~l~~~~--------------~~~~wE 248 (443)
+|||+|+ ++.+|.|||+..+... ..+.+.+|+|+||.+|+..+..+.... .....+
T Consensus 2 ~rDP~v~-~~~dg~Yy~~~T~~~~~~~~~~~~~~~~gi~i~~S~DLv~W~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~W 80 (269)
T cd08986 2 IRDTYVT-LGPDGYYYLTGTTPPPGLPFEDCSIVNDGIPLWRSKDLKKWESLGLIWDREKDATWQSYWIDEDDWYKNAVW 80 (269)
T ss_pred CcCCeEE-ecCCCcEEEEEccCCccccccccccCCCceEEEeCccccCccccCcccccCCcccccccccccCCcccCCcC
Confidence 7999965 5467888888765431 124578999999999999876543211 123456
Q ss_pred eCcEEEeccCCccceeeccCCCceeeEEEEeeCCC--ceeEEEEEEEeCCCCeeccCCCCCCCCCceecccCCCccccee
Q 013412 249 CPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSD--KHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTF 326 (443)
Q Consensus 249 CPdlf~l~~~g~~g~~~~~~~~~~k~vL~~s~~~~--~~~~Y~vG~~d~~~~~F~p~~~~~~~~~~~~lD~G~fYA~qtf 326 (443)
||+++.++ | +|+|.++.... ......+..-+...+.|+..... ..+ ..-.-+..|
T Consensus 81 AP~v~~~~--g-------------~yyl~~s~~~~~~~~~~i~va~a~~p~Gp~~~~~~~------~~~--~~~iD~~~f 137 (269)
T cd08986 81 APELHYIK--G-------------RWYLVACMNNPGYGGSSILLSTSGKIEGPYKHITGN------KPL--FPGIDPSLF 137 (269)
T ss_pred CceEEEEC--C-------------EEEEEEEccCCCCCceEEEEEeCCCCCCCcEeccCC------CCC--CCccCCceE
Confidence 99999987 5 88888876421 12223333322223455422110 000 012236677
Q ss_pred ecCCCCcEEEE
Q 013412 327 FDSAKNRRVLW 337 (443)
Q Consensus 327 ~d~~~grri~~ 337 (443)
.|. +|+..|+
T Consensus 138 ~D~-DG~~Yl~ 147 (269)
T cd08986 138 EDD-DGKVYLV 147 (269)
T ss_pred EcC-CCCEEEE
Confidence 775 6777766
No 51
>cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68. Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32
Probab=98.45 E-value=6.7e-06 Score=80.00 Aligned_cols=155 Identities=13% Similarity=0.107 Sum_probs=98.6
Q ss_pred ccCCCcceEEC-CEEEEEEEECCCCCCCCCCceEEEEEeCCCcc-cEecc-CCCCCC--CccCCCCeEeeeEEEcCCCeE
Q 013412 67 INDPNGPMYYK-GVYHLFYQYNPLGPLFGDKMIWAHSVSYDLIN-WIHLS-HALCPS--GPYDINSCWSGSVTILPGDKP 141 (443)
Q Consensus 67 ~NDPnG~~y~~-G~YHlFyQ~~P~~~~~g~~~~Wgha~S~Dlv~-W~~~~-~aL~P~--~~~D~~gv~SGsav~~~dg~~ 141 (443)
+-.|. +++.+ |+|+|||..... ..+ ....+.|+|+|+.. |+... ..+.+. ...+...+..++++.+++|++
T Consensus 60 ~wap~-v~~~~~g~~~l~yt~~~~--~~~-~~~i~~a~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Dp~v~~d~dG~~ 135 (286)
T cd08772 60 IWAPS-IVYIENGKFYLYYTDVSF--TKN-QQTIGVATAEDGNGPWTDYIGGPVLPDNPPAADVSNFRDPFVFEDDDGKW 135 (286)
T ss_pred Eecce-EEEcCCCCEEEEEEeecC--CCC-ceeEEEEEcCCCCCCCccccccccccCCCCccccccccCCeEEEcCCCCE
Confidence 44666 77777 999999987643 123 57899999999975 55442 112222 122334578899988766999
Q ss_pred EEEEccccCCCceeEEEEEecCCCCCCcceeEEecCCceEeCCCCCCCCCCCCCEEEeecCCCeEEEEEeeeeC----Cc
Q 013412 142 FILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID----NE 217 (443)
Q Consensus 142 ~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~~~----~~ 217 (443)
+|+|.+........+.+|.|+|. .+|++....+++.... ....+.-|.++ + .+|+|||++.+... ..
T Consensus 136 y~~~~~~~~~~~~~i~~~~s~d~-----~~w~~~~~~~~~~~~~--~~~~~E~P~~~-~-~~g~~yL~~s~~~~~~~~~~ 206 (286)
T cd08772 136 YLVFGSGDHHNFGGIFLYESDDD-----TTWKKGSAELLISEGE--GGKQIEGPGLL-K-KNGKYYLFYSINGTGRVDST 206 (286)
T ss_pred EEEEccccCCCCCeEEEEEcCCC-----CCcccccceeeEeecc--CCCceeccEEE-E-ECCEEEEEEEcCCCcCCCCC
Confidence 99998764333456789999886 6787653222222211 23467789854 5 47899999977541 12
Q ss_pred ceEEEEEeCC-CCCcEEc
Q 013412 218 GMAFVYWSWD-FIHWTKL 234 (443)
Q Consensus 218 G~i~lY~S~D-l~~W~~~ 234 (443)
-.+..++|++ +-.|+..
T Consensus 207 y~~~~~~~~~~~g~~~~~ 224 (286)
T cd08772 207 YSIGYARSESDTGPYVPK 224 (286)
T ss_pred cceEEEEccCCCCCcccC
Confidence 2455667765 4456544
No 52
>cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended
Probab=98.37 E-value=5.4e-06 Score=81.43 Aligned_cols=78 Identities=21% Similarity=0.325 Sum_probs=55.4
Q ss_pred CceEeCCCCCCCCCCCCCEEEeecCCCeEEEEEeeeeCCcceEEEEEeCCCCCcEEcccccccC---------CCCCeee
Q 013412 178 NPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSV---------QETGMWE 248 (443)
Q Consensus 178 nPvi~~p~~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~~~~~G~i~lY~S~Dl~~W~~~g~~l~~~---------~~~~~wE 248 (443)
||||. ..+.||.|+ + .++.|||+.++..... .+.+|+|+||.+|+..+..+... ..+++|
T Consensus 1 NPvi~-------~~~~DP~ii-~-~~~~yY~~~t~~~~~~-g~~~~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~W- 69 (269)
T cd08989 1 NPILK-------GDNPDPSII-R-AGDDYYMASSTFEWFP-GVQIHHSTDLVNWHLIGHPLDRLEDLDMKGNPYSGGIW- 69 (269)
T ss_pred CCcCC-------CCCCCCcEE-E-ECCeEEEEECccccCC-CcEEEECCccCCCEEccccccCccccccccCCCCCcEE-
Confidence 67773 356899965 4 4789999986543222 36799999999999987644321 123466
Q ss_pred eCcEEEeccCCccceeeccCCCceeeEEEEeeC
Q 013412 249 CPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (443)
Q Consensus 249 CPdlf~l~~~g~~g~~~~~~~~~~k~vL~~s~~ 281 (443)
+|+++..+ | ||+|.++..
T Consensus 70 AP~v~~~~--G-------------~yy~yy~~~ 87 (269)
T cd08989 70 APCLSYYD--G-------------KFWLIYTAV 87 (269)
T ss_pred cceEEEEC--C-------------EEEEEEecc
Confidence 99999986 5 788887764
No 53
>cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs
Probab=98.32 E-value=1.2e-05 Score=79.57 Aligned_cols=78 Identities=18% Similarity=0.378 Sum_probs=56.2
Q ss_pred CCceEeCCCCCCCCCCCCCEEEeecCCCeEEEEEeeeeCCcceEEEEEeCCCCCcEEcccccccCCCCCeeeeCcEEEec
Q 013412 177 GNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVS 256 (443)
Q Consensus 177 ~nPvi~~p~~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~~~~~G~i~lY~S~Dl~~W~~~g~~l~~~~~~~~wECPdlf~l~ 256 (443)
.||||. ..+.||.|+ + .+++|||+.++.. ..+.+.+|+|+||.+|+..+..+. ...+++| +|+++..+
T Consensus 7 ~nPv~~-------~~~~DP~i~-~-~~~~yY~~~t~~~-~~~gi~i~~S~DL~~W~~~g~~~~-~~~~~~W-AP~i~~~~ 74 (280)
T cd09002 7 RNPILA-------GDYPDPSIL-R-DGEDYYMTHSSFK-YTPGLVIWHSRDLVNWTPVGPALP-EYEGDVW-APDLCKYD 74 (280)
T ss_pred eCCccC-------CCCCCCEEE-E-ECCEEEEEEcchh-cCCCEEEEECCCcCCceEcccccc-CCCCCEE-cCeeEEEC
Confidence 489984 245899965 4 3679999765432 223578999999999999875443 2345688 89999876
Q ss_pred cCCccceeeccCCCceeeEEEEeeC
Q 013412 257 INGTIGVDTSVLNPGVKHVLKTSLF 281 (443)
Q Consensus 257 ~~g~~g~~~~~~~~~~k~vL~~s~~ 281 (443)
| ||+|.++..
T Consensus 75 --g-------------kyy~yys~~ 84 (280)
T cd09002 75 --G-------------RYYIYFPAI 84 (280)
T ss_pred --C-------------EEEEEEEee
Confidence 5 788887764
No 54
>cd08981 GH43_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.32 E-value=9.6e-06 Score=80.69 Aligned_cols=78 Identities=14% Similarity=0.139 Sum_probs=56.0
Q ss_pred CCCCCCEEEeecCCCeEEEEEeeeeCC----cceEEEEEeCCCCCcEEcccccccCC---CCCeeeeCcEEEeccCCccc
Q 013412 190 DMFRDPTTAWQAPDGRWRVLVGGQIDN----EGMAFVYWSWDFIHWTKLDHPLYSVQ---ETGMWECPDIFPVSINGTIG 262 (443)
Q Consensus 190 ~~fRDP~Vvw~~~~g~~~Mv~ga~~~~----~G~i~lY~S~Dl~~W~~~g~~l~~~~---~~~~wECPdlf~l~~~g~~g 262 (443)
..+|||+|++.+++|.|||+..+.... ...+.+|+|+||.+|+..+..+.... ......+|+++..+ |
T Consensus 4 ~~~~DP~v~~~~~~g~yYl~~T~~~~~~~~~~~gi~v~~S~DLv~W~~~g~~~~~~~~~~~~~~~WAP~v~~~~--G--- 78 (291)
T cd08981 4 IRIRDPFILADPETGTYYLYGTTDPNIWGGEGTGFDVYKSKDLKDWEGPYPVFRPPDDFWADDNFWAPEVHEYK--G--- 78 (291)
T ss_pred ccccCCEEEEECCCCEEEEEEecCccccccCCCcEEEEECCChhcccccceeeccCCCcCccccccCCeeeeeC--C---
Confidence 458999987665689999998765321 12378999999999999876443221 12357899999886 5
Q ss_pred eeeccCCCceeeEEEEeeCC
Q 013412 263 VDTSVLNPGVKHVLKTSLFS 282 (443)
Q Consensus 263 ~~~~~~~~~~k~vL~~s~~~ 282 (443)
+|+|.++...
T Consensus 79 ----------~yyly~s~~~ 88 (291)
T cd08981 79 ----------RYYMFATFHN 88 (291)
T ss_pred ----------EEEEEEEecc
Confidence 8888877643
No 55
>cd08998 GH43_ABN_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=98.21 E-value=4.9e-05 Score=75.18 Aligned_cols=153 Identities=14% Similarity=0.138 Sum_probs=92.1
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCC--cccEeccCCCCCCCccCCCCeEeeeEEEcCCCeEE
Q 013412 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDL--INWIHLSHALCPSGPYDINSCWSGSVTILPGDKPF 142 (443)
Q Consensus 65 gw~NDPnG~~y~~G~YHlFyQ~~P~~~~~g~~~~Wgha~S~Dl--v~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~ 142 (443)
+-+-.|. +++.+|+|||||..+..+. + ....++|+|+|+ -.|+..++++.+........+..+++++++||+++
T Consensus 56 ~~~wAP~-v~~~~g~yyl~ys~~~~~~--~-~~~i~va~s~~~~~gpw~~~~~v~~~~~~~~~~~~iDp~vf~d~dG~~Y 131 (288)
T cd08998 56 GNLWAPD-VIYLNGKYYLYYSVSTFGS--N-RSAIGLATSDTLPDGPWTDHGIVIESGPGRDDPNAIDPNVFYDEDGKLW 131 (288)
T ss_pred CCccCCe-EEEECCEEEEEEEEEeCCC--C-ceEEEEEEeCCCCCCCCEEcceeeecCCCCCCcccccCCEEEcCCCCEE
Confidence 3345666 7889999999998764321 2 567899999998 79999876665543323345678899887789999
Q ss_pred EEEccccCCCceeEEEE-EecCCCCCCcceeEEecCCceEeCCCCCCCCCCCCCEEEeecCCCeEEEEEeeee-C---Cc
Q 013412 143 ILYTGIDASGQQVQNLA-MPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI-D---NE 217 (443)
Q Consensus 143 l~YTg~~~~~~~~q~lA-~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~~-~---~~ 217 (443)
|+|.+... .+.++ .+.|.+.+ ..+... ...++..+. .......|++ ++ .+|+|||++.+.. . ..
T Consensus 132 l~~~~~~~----~i~~~~l~~~~~~~--~~~~~~-~~~i~~~~~--~~~~~Egp~~-~k-~~g~YYl~~S~~~~~~~~~~ 200 (288)
T cd08998 132 LSFGSFWG----GIFLVELDPKTGKP--LYPGGY-GYNIAGRPR--GHGAIEAPYI-IY-RGGYYYLFVSYGGCCAGEDS 200 (288)
T ss_pred EEeeeccC----CEEEEEeCcccCCc--cCCCCc-ceEEeccCC--CCCceeeeEE-EE-eCCEEEEEEEcchhcCCCCC
Confidence 99975321 12233 23332211 122100 011222221 1123578984 55 5799999986532 1 12
Q ss_pred c-eEEEEEeCCCC-CcE
Q 013412 218 G-MAFVYWSWDFI-HWT 232 (443)
Q Consensus 218 G-~i~lY~S~Dl~-~W~ 232 (443)
+ ++.+++|+++. -|+
T Consensus 201 ~y~v~~~~s~~~~GP~~ 217 (288)
T cd08998 201 TYNIRVGRSKSITGPYV 217 (288)
T ss_pred ceEEEEEEcCCCCCCcC
Confidence 2 56788998864 465
No 56
>cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases. Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal
Probab=98.21 E-value=1.8e-05 Score=78.50 Aligned_cols=130 Identities=17% Similarity=0.149 Sum_probs=86.5
Q ss_pred ceEEC-CEEEEEEEECCCCCCCCCCceEEEEEeC-CCcccEeccCC-CCCCCccCCCCeEeeeEEEcCCCeEEEEEcccc
Q 013412 73 PMYYK-GVYHLFYQYNPLGPLFGDKMIWAHSVSY-DLINWIHLSHA-LCPSGPYDINSCWSGSVTILPGDKPFILYTGID 149 (443)
Q Consensus 73 ~~y~~-G~YHlFyQ~~P~~~~~g~~~~Wgha~S~-Dlv~W~~~~~a-L~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~ 149 (443)
++..+ |+|+|||..+......+ ...-++|+|+ |+++|++.+.. +.+....+..+.-.+.++.+ +|+++|+|++..
T Consensus 68 av~~~~g~~~~~YTg~~~~~~~~-~~~~~lA~S~ddg~~w~k~~~~~~~~~~~~~~~~~RDP~V~~~-~g~~~m~~g~~~ 145 (298)
T cd08996 68 AVVDDNGKLVLFYTGNVKLDGGR-RQTQCLAYSTDDGRTFTKYEGNPVIPPPDGYTTHFRDPKVFWH-DGKWYMVLGAGT 145 (298)
T ss_pred EEEcCCCcEEEEEeceeCCCCCc-eEEEEEEEEcCCCCEEEECCCCceEcCCCCCCCcccCCeEEeE-CCEEEEEEEEEe
Confidence 44456 99999998764321112 5678999999 89999987432 22112223345668888764 799999999875
Q ss_pred CCCceeEEEEEecCCCCCCcceeEEecCCceEeCCCCCCCCCCCCCEEEeecCC--CeEEEEEeeee
Q 013412 150 ASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPD--GRWRVLVGGQI 214 (443)
Q Consensus 150 ~~~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~~~--g~~~Mv~ga~~ 214 (443)
.+....+.++.|+|+ ++|++. .++..... .....+.-|.+ ++ .+ ++|+|+++...
T Consensus 146 ~~~~~~i~ly~S~Dl-----~~W~~~--~~~~~~~~-~~~~~~EcP~l-~~-l~~~~k~vL~~s~~~ 202 (298)
T cd08996 146 EDGTGRILLYRSDDL-----KNWEYL--GELLTSLG-DFGYMWECPDL-FP-LDVEGKWVLIFSPQG 202 (298)
T ss_pred cCCCcEEEEEECCCC-----CCCEEc--ceecccCC-CccceEeCCcE-EE-ECCCCeEEEEECCCC
Confidence 444566788999886 799975 34431111 12346778884 44 46 89999998764
No 57
>cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase. Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n
Probab=98.00 E-value=0.00013 Score=74.24 Aligned_cols=149 Identities=16% Similarity=0.201 Sum_probs=92.2
Q ss_pred ECCEEEEEEEECCCCCCC--CCCceEEEEEeCCCc----ccEeccCCCCCCCcc-C-------------CCCeEeeeEEE
Q 013412 76 YKGVYHLFYQYNPLGPLF--GDKMIWAHSVSYDLI----NWIHLSHALCPSGPY-D-------------INSCWSGSVTI 135 (443)
Q Consensus 76 ~~G~YHlFyQ~~P~~~~~--g~~~~Wgha~S~Dlv----~W~~~~~aL~P~~~~-D-------------~~gv~SGsav~ 135 (443)
.+|+|||||..+-..... ...+..++++++|+. .|+.+.+.+.+++.+ + ....-.+.++.
T Consensus 80 ~dg~~~lfYTg~~~~~~~~~~~~Q~ia~a~~~~~~v~~~~~~~~~~lf~~Dg~~Yqt~~q~~~~~~~~~~~~fRDP~vf~ 159 (349)
T cd08997 80 DDGTVQLFYTAVGRKGEPQPTFTQRLALARGTLSVVNLSGFEDHHELFEPDGDLYQTDQQYEGTGAQGDIKAFRDPFVFE 159 (349)
T ss_pred CCCeEEEEEeccccCCCCCCCceEEEEEEECCCcceEecccCccceeeeCCCceEEeccccccccccCccCcccCCEEEe
Confidence 459999999987321111 115679999999984 444444555665432 1 11234566666
Q ss_pred cC-CCeEEEEEccccCCC---------------------------ceeEEEEEecCCCCCCcceeEEecCCceEeCCCCC
Q 013412 136 LP-GDKPFILYTGIDASG---------------------------QQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGV 187 (443)
Q Consensus 136 ~~-dg~~~l~YTg~~~~~---------------------------~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p~~~ 187 (443)
++ +|+.+|+++++.... .-.+++|++++.. +.+|+-+ .|++.+.. .
T Consensus 160 d~~~G~~ymvfeant~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~G~IGia~~~s~d---l~~W~~~--~PL~~a~~-v 233 (349)
T cd08997 160 DPETGKTYLLFEGNTAGERGSQECTEAELGRVLPDTVKPDGASYQNGNVGIAVAKNDD---LTEWKLL--PPLLEANG-V 233 (349)
T ss_pred cCCCCcEEEEEEeccCCCCCccccccccccccccccccccccccccceEEEEEecCCC---CCCcEEc--CccccCCC-c
Confidence 54 588999999875421 1345688776431 4789865 58876432 1
Q ss_pred CCCCCCCCEEEeecCCCeEEEEEeeeeC-------CcceEEEEEeCCCC-CcEE
Q 013412 188 KDDMFRDPTTAWQAPDGRWRVLVGGQID-------NEGMAFVYWSWDFI-HWTK 233 (443)
Q Consensus 188 ~~~~fRDP~Vvw~~~~g~~~Mv~ga~~~-------~~G~i~lY~S~Dl~-~W~~ 233 (443)
..++..|.+ ++ .+|+|||+..++.. +...+..|.|+++. .|+.
T Consensus 234 -~d~~E~P~v-~~-~~gk~yL~~s~~~~~~~~~~~~~~~~~g~vsdsl~GP~~~ 284 (349)
T cd08997 234 -NDELERPHV-VF-HNGKYYLFTISHRSTFAPGLSGPDGLYGFVSDSLRGPYKP 284 (349)
T ss_pred -CCceEcceE-EE-ECCEEEEEEeCCcCccccccCCCCcEEEEEeCCCCCCCcc
Confidence 345889995 45 58999999875542 11235667888874 4543
No 58
>cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=97.98 E-value=0.00043 Score=67.89 Aligned_cols=140 Identities=9% Similarity=0.074 Sum_probs=84.8
Q ss_pred CCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCc-ccEe-cc-CCCCCCCccCCCCeEeeeEEEcCCCeEEEEE
Q 013412 69 DPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIH-LS-HALCPSGPYDINSCWSGSVTILPGDKPFILY 145 (443)
Q Consensus 69 DPnG~~y~~G~YHlFyQ~~P~~~~~g~~~~Wgha~S~Dlv-~W~~-~~-~aL~P~~~~D~~gv~SGsav~~~dg~~~l~Y 145 (443)
-|. +++.+|+|+|||..+ ...++|+|+|.. .|+. .+ +.+.+.. ......+++++.++||+.+|+|
T Consensus 68 AP~-v~~~~g~yy~yys~~---------~~i~va~s~~p~gp~~~~~~~p~~~~~~--~~~~~iDp~vf~d~dG~~yl~~ 135 (275)
T cd09004 68 APS-VIERNGKYYFYFSAN---------GGIGVAVADSPLGPFKDALGKPLIDKFT--FGAQPIDPDVFIDDDGQAYLYW 135 (275)
T ss_pred CCe-EEEECCEEEEEEEcC---------CcEEEEEeCCCCCCCCCCCCCccccCCc--CCCCccCCCeEECCCCCEEEEE
Confidence 355 888999999999854 347899999965 7887 33 3333321 1234567888887789999999
Q ss_pred ccccCCCceeEEEEEecCCCCCCcceeEEecCCceEeCCCCCCCCCCCCCEEEeecCCCeEEEEEeeeeC-Ccc-eEEEE
Q 013412 146 TGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID-NEG-MAFVY 223 (443)
Q Consensus 146 Tg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~~~-~~G-~i~lY 223 (443)
.+.. ....+..+.|. .+|+.. ..++.... ...+.-|. +++ .+|+|||++.+... ..+ .+.+.
T Consensus 136 ~~~~----~~~i~~l~~d~-----~~~~~~--~~~~~~~~---~~~~EgP~-i~k-~~G~yyl~ys~~~~~~~~Y~~~ya 199 (275)
T cd09004 136 GGWG----HCNVAKLNEDM-----ISFDGE--RDGSEITP---KNYFEGPF-MFK-RNGIYYLMWSEGGWTDPDYHVAYA 199 (275)
T ss_pred cCcC----CEEEEEECCCc-----ccccCc--ceeeeccC---CCceecce-EEE-ECCEEEEEEECCCCCCCCceEEEE
Confidence 7521 11122344553 455432 11221111 12457888 456 58899999877532 112 55667
Q ss_pred EeCCCC-CcEEccc
Q 013412 224 WSWDFI-HWTKLDH 236 (443)
Q Consensus 224 ~S~Dl~-~W~~~g~ 236 (443)
+|++.. -|+..+.
T Consensus 200 ~s~~~~GP~~~~~~ 213 (275)
T cd09004 200 MADSPLGPFERPGN 213 (275)
T ss_pred EcCCCCCCcccCCc
Confidence 888764 4776553
No 59
>TIGR01322 scrB_fam sucrose-6-phosphate hydrolase.
Probab=97.96 E-value=0.0001 Score=77.68 Aligned_cols=131 Identities=12% Similarity=0.089 Sum_probs=81.6
Q ss_pred ceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEecc-CCCCCCCccCCCCeEeeeEEEcCCCeEEEEEccccCC
Q 013412 73 PMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLS-HALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDAS 151 (443)
Q Consensus 73 ~~y~~G~YHlFyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~-~aL~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~ 151 (443)
++..+|++||||..+.....+.....-.+|+|+|+.+|+..+ ++|.+.......+.-.+.++. .+|+++|++.+....
T Consensus 91 av~~~g~~~l~YTg~~~~~~~~~~~~q~lA~S~Dg~~~~k~~~pvi~~~~~~~~~~fRDP~V~~-~~g~~~M~~g~~~~~ 169 (445)
T TIGR01322 91 AVDNNGQLTLMYTGNVRDSDWNRESYQCLATMDDDGHFEKFGIVVIELPPAGYTAHFRDPKVWK-HNGHWYMVIGAQTET 169 (445)
T ss_pred EEeeCCEEEEEEeccccCCCCCeeEEEEEEEcCCCCeEEECCCceEeCCCCCCcCcCCCCcEEe-ECCEEEEEEEEecCC
Confidence 455799999999976532222212334689999999999886 456543221112334566654 589999998765433
Q ss_pred CceeEEEEEecCCCCCCcceeEEecCCceEeCCC---CCCCCCCCCCEEEeecCCCeEEEEEeee
Q 013412 152 GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPN---GVKDDMFRDPTTAWQAPDGRWRVLVGGQ 213 (443)
Q Consensus 152 ~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p~---~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~ 213 (443)
......+..|+|+ ++|+.. .++..... +.....+.-|- ++. -+++|+|+++..
T Consensus 170 ~~g~i~ly~S~Dl-----~~W~~~--g~~~~~~~~~~~~~g~~~ECPd-lf~-l~~k~vL~~s~~ 225 (445)
T TIGR01322 170 EKGSILLYRSKDL-----KNWTFV--GEILGDGQNGLDDRGYMWECPD-LFS-LDGQDVLLFSPQ 225 (445)
T ss_pred CceEEEEEECCCc-----ccCeEe--cccccccccccCCccceEECCe-EEE-ECCcEEEEEecc
Confidence 3344567778775 899975 35543220 11112466787 444 578999999754
No 60
>cd08985 GH43_6 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=97.90 E-value=0.0011 Score=65.03 Aligned_cols=142 Identities=14% Similarity=0.198 Sum_probs=87.4
Q ss_pred CCCcceEE--CCEEEEEEEECCCCCCCCCCceEEEEEeCCCc-ccEeccCCCCCCCccCCCCeEeeeEEEcCCCeEEEEE
Q 013412 69 DPNGPMYY--KGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILY 145 (443)
Q Consensus 69 DPnG~~y~--~G~YHlFyQ~~P~~~~~g~~~~Wgha~S~Dlv-~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~Y 145 (443)
-|. ++|. +|+|||||..+... .+ ....|+|+|++.. .|+.++..+ |. ......+++++++||+.+|+|
T Consensus 67 aP~-v~y~~~~g~Y~m~~~~~~~~--~~-~~~igvA~Sd~p~Gpf~~~~~~~-~~----~~~~~Dp~vf~DdDG~~Yl~~ 137 (265)
T cd08985 67 RPK-VIYNAKTGKYVMWMHIDSSD--YS-DARVGVATSDTPTGPYTYLGSFR-PL----GYQSRDFGLFVDDDGTAYLLY 137 (265)
T ss_pred CCe-EEEeCCCCEEEEEEEeCCCC--Cc-ceeEEEEEeCCCCCCCEECCccC-CC----CCCccCCceEEcCCCCEEEEE
Confidence 344 5664 69999999887522 23 5789999999865 688765433 21 133567889998889999999
Q ss_pred ccccCCCceeEEEEEe-cCCCCCCcceeEEecCCceEeCCCCCCCCCCCCCEEEeecCCCeEEEEEeeeeC-CcceEEEE
Q 013412 146 TGIDASGQQVQNLAMP-ENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID-NEGMAFVY 223 (443)
Q Consensus 146 Tg~~~~~~~~q~lA~s-~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~~~-~~G~i~lY 223 (443)
.+.. .....++.- .|. ..+. +.+..... ......|. +++ .+|.|||+...... ....+..+
T Consensus 138 ~~~~---~~~i~i~~L~~d~-----~~~~---~~~~~~~~----~~~~EaP~-i~K-~~g~YYL~~S~~t~~~~~~~~y~ 200 (265)
T cd08985 138 SDRD---NSDLYIYRLTDDY-----LSVT---GEVTTVFV----GAGREAPA-IFK-RNGKYYLLTSGLTGWNPNDARYA 200 (265)
T ss_pred ecCC---CCceEEEEeCCCc-----cccc---ceEEEccC----CCccccce-EEE-ECCEEEEEEccCCCccCCceEEE
Confidence 8642 123344433 222 2332 23332111 23567898 566 58999999876421 11245677
Q ss_pred EeCCCC-CcEEccc
Q 013412 224 WSWDFI-HWTKLDH 236 (443)
Q Consensus 224 ~S~Dl~-~W~~~g~ 236 (443)
+|+++. .|+..+.
T Consensus 201 ~s~s~~GP~~~~~~ 214 (265)
T cd08985 201 TATSILGPWTDLGN 214 (265)
T ss_pred EecCCCCCccccCc
Confidence 888764 6776654
No 61
>COG2152 Predicted glycosylase [Carbohydrate transport and metabolism]
Probab=97.83 E-value=0.00016 Score=71.07 Aligned_cols=103 Identities=17% Similarity=0.263 Sum_probs=77.8
Q ss_pred CeEeeeEEEcCCCeEEEEEccc-----cCCCceeEEEEEecCCCCCCcce-eEEecCCceEeC-CCCCCCCCCCCCEEEe
Q 013412 127 SCWSGSVTILPGDKPFILYTGI-----DASGQQVQNLAMPENLSDPLLKD-WVKFSGNPVMTP-PNGVKDDMFRDPTTAW 199 (443)
Q Consensus 127 gv~SGsav~~~dg~~~l~YTg~-----~~~~~~~q~lA~s~D~~d~~l~~-w~k~~~nPvi~~-p~~~~~~~fRDP~Vvw 199 (443)
.+|-++++. .++++.++|... .........+|.|+|+ .+ |++. .+|++.+ ....+.....||-|.
T Consensus 30 ~vFNpav~~-~~~~~~~l~Rv~~~yye~~~~~s~l~ia~s~dg-----i~~~~~e-~ep~~~P~~~~~e~~G~EDPRvt- 101 (314)
T COG2152 30 SVFNPAVVL-VGGELLLLYRVVEGYYEDHSSISHLRIARSDDG-----IGEFEIE-PEPTLWPANYPYEIYGIEDPRVT- 101 (314)
T ss_pred EEecceeEE-ECCEEEEEEEEeccccccCccceEEEEEecccC-----CCceecC-CcceEecCCCchhhhcccCceEE-
Confidence 689999887 489999988763 2234567789999998 44 8886 4799866 223456788999965
Q ss_pred ecCCCeEEEEEeeeeCCcceEEEEEeCCCCCcEEccccc
Q 013412 200 QAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPL 238 (443)
Q Consensus 200 ~~~~g~~~Mv~ga~~~~~G~i~lY~S~Dl~~W~~~g~~l 238 (443)
+ .+++|+|.+.+..+......+..++|+.+|++.+.+.
T Consensus 102 ~-I~~~y~mtYTa~s~~g~~~~la~t~~f~n~~rig~i~ 139 (314)
T COG2152 102 K-IGGRYYMTYTAYSDKGPRLALAVTKDFLNWERIGAIF 139 (314)
T ss_pred E-ECCEEEEEEEecCCCCcccchhhhhhhhhhhhccccc
Confidence 4 5799999999875444466788899999999987543
No 62
>PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B ....
Probab=97.73 E-value=0.00033 Score=68.63 Aligned_cols=155 Identities=17% Similarity=0.215 Sum_probs=100.3
Q ss_pred CCcccceeeecCCCCccCCCcceEEC-CEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEecc-CCCCCCCccCCCCeE
Q 013412 52 QPYLTSYHFRPPQNWINDPNGPMYYK-GVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLS-HALCPSGPYDINSCW 129 (443)
Q Consensus 52 ~~~Rp~yH~~p~~gw~NDPnG~~y~~-G~YHlFyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~-~aL~P~~~~D~~gv~ 129 (443)
.+|+..-.+.....+.-||. ++.++ |+++|+|-..... ... ..-+....+.|..++...+ ..+.+.......++.
T Consensus 104 Gp~~~~~~~~~~~~~~iD~~-vf~d~dG~~Yl~~~~~~~~-~~~-~~i~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~~~ 180 (286)
T PF04616_consen 104 GPWTDPGKIPIPGGNSIDPS-VFVDDDGKYYLYYGSWDNG-DPG-GGIYIAELDPDGTSLTGEPVVVIFPGDEGWDGGVV 180 (286)
T ss_dssp S-EEEEEEEEEESSSSSSEE-EEEETTSEEEEEEEESTTT-SSE-EEEEEEEEETTTSSEEEEECEEEEEESGSSTTTBE
T ss_pred cccccccceeeccccccCce-EEEecCCCcEEeCcccCCC-ccc-eeEEeecccCccccccCcccccccccccccCCccc
Confidence 57777666655577778998 66665 9999999776543 112 3456667789998888776 344444333345677
Q ss_pred eeeEEEcCCCeEEEEEccccCCCceeEEEEEecCCCCCCcceeEEecCCceEeCC-CCCCCCCCCCCEEEeecCCCeEEE
Q 013412 130 SGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPP-NGVKDDMFRDPTTAWQAPDGRWRV 208 (443)
Q Consensus 130 SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p-~~~~~~~fRDP~Vvw~~~~g~~~M 208 (443)
-|..++..+|+++|+|++..........+|+|++.. -.|+..+.+|++... .......-.-.. ++...+|+|+|
T Consensus 181 Egp~~~k~~g~yYl~~s~~~~~~~y~v~~~~s~~~~----gp~~~~~~~~~~~~~~~~~~~~g~gH~~-~~~~~~g~~~~ 255 (286)
T PF04616_consen 181 EGPFVFKHGGKYYLFYSAGGTGSPYQVGYARSDSPL----GPWEWKKGNPILFSRDGENGVYGPGHGS-VFKDPDGRWYI 255 (286)
T ss_dssp EEEEEEEETTEEEEEEEESGSSTTTEEEEEEESSTT----SGGEETTTCBCEGTTBTTSSCEEEEEEE-EEEETTSEEEE
T ss_pred cceEEEEcCCCEEEEEeccCCCCCceEEEeeccCCC----CceeeccCCeEEEeeccCCccccCccCC-EEECCCCCEEE
Confidence 787777789999999997544333556789998874 456666567777531 111112222334 45657888988
Q ss_pred EEeeee
Q 013412 209 LVGGQI 214 (443)
Q Consensus 209 v~ga~~ 214 (443)
++=+..
T Consensus 256 ~yh~~~ 261 (286)
T PF04616_consen 256 VYHARN 261 (286)
T ss_dssp EEEEEE
T ss_pred EEeecc
Confidence 875544
No 63
>cd09003 GH43_AXH_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose
Probab=97.71 E-value=0.0027 Score=63.80 Aligned_cols=146 Identities=12% Similarity=0.126 Sum_probs=84.6
Q ss_pred CCcceEEC----CEEEEEEEECCCCCCCCCCceEEEEEeCCCc-ccEec-cC-CCCCCCc-cC-CCCeEeeeEEEcCCCe
Q 013412 70 PNGPMYYK----GVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHL-SH-ALCPSGP-YD-INSCWSGSVTILPGDK 140 (443)
Q Consensus 70 PnG~~y~~----G~YHlFyQ~~P~~~~~g~~~~Wgha~S~Dlv-~W~~~-~~-aL~P~~~-~D-~~gv~SGsav~~~dg~ 140 (443)
|. +++.+ |+|+|||... ....+.|+|++.. .|+++ +. .+.+..+ .+ ...+..+++++++||+
T Consensus 81 P~-v~~~~~~~~gkyylyy~~~--------~~~igva~SdsP~GP~~~~~g~~l~~~~~~~~~~~~~~iDp~~f~DdDG~ 151 (311)
T cd09003 81 PS-IAVKKINGKGKFYLYFANG--------GGGIGVLTADSPVGPWTDPLGKPLITGSTPGCAGVVWLFDPAVFVDDDGQ 151 (311)
T ss_pred Cc-eEEeccCCCCEEEEEEecC--------CCeEEEEEcCCCCCCcccCCCCeeecCCCCCccCCccccCCCeEECCCCC
Confidence 44 77888 9999999532 2458999999965 89975 32 2222111 11 1224688988888999
Q ss_pred EEEEEccccC----CCceeEEEEEec-CCCCCCcceeEEecCCceEeCCCCCCCCCCCCCEEEeecCCCeEEEEEeeee-
Q 013412 141 PFILYTGIDA----SGQQVQNLAMPE-NLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI- 214 (443)
Q Consensus 141 ~~l~YTg~~~----~~~~~q~lA~s~-D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~~- 214 (443)
.||+|.+... ...+.+.+|.-+ |. .+ ..+.++.-..+ ..+.-|. +++ .+|+|||++.+.-
T Consensus 152 ~Yl~~g~~~~~~~~~~~~~i~i~~l~~D~-----~~---~~g~~~~i~~~----~~~Egp~-~~K-~~G~YYL~ys~~~~ 217 (311)
T cd09003 152 GYLYFGGGVPGGRWANPNTARVIKLGDDM-----IS---VDGSAVTIDAP----YFFEASG-LHK-INGTYYYSYCTNFG 217 (311)
T ss_pred EEEEECCccCCCccccCCCEEEEEeCCCc-----ee---ccCCceEccCC----CceEeee-EEE-ECCEEEEEEeCCCC
Confidence 9999975321 112334445333 32 22 22233321111 2457788 456 5899999987541
Q ss_pred ------CCcceEEEEEeCCCC-CcEEccccc
Q 013412 215 ------DNEGMAFVYWSWDFI-HWTKLDHPL 238 (443)
Q Consensus 215 ------~~~G~i~lY~S~Dl~-~W~~~g~~l 238 (443)
.....+.+.+|++.. .|+..+.++
T Consensus 218 ~~~~~~~~~y~v~y~~s~~~~GP~~~~g~il 248 (311)
T cd09003 218 GRDPGKPPPGRIAYMTSKNPMGPFTYKGIIL 248 (311)
T ss_pred ccCCCCCCceeEEEEEcCCCCCCcccCCEec
Confidence 223355566887653 587655433
No 64
>COG3507 XynB Beta-xylosidase [Carbohydrate transport and metabolism]
Probab=97.68 E-value=0.00071 Score=71.40 Aligned_cols=142 Identities=20% Similarity=0.336 Sum_probs=81.9
Q ss_pred EEEEEeCCCcccEeccCCCCCCC------c-cCCCCeEeeeEEEcCCCeEEEEEccccCCC---ceeEEEEEecCCCCCC
Q 013412 99 WAHSVSYDLINWIHLSHALCPSG------P-YDINSCWSGSVTILPGDKPFILYTGIDASG---QQVQNLAMPENLSDPL 168 (443)
Q Consensus 99 Wgha~S~Dlv~W~~~~~aL~P~~------~-~D~~gv~SGsav~~~dg~~~l~YTg~~~~~---~~~q~lA~s~D~~d~~ 168 (443)
-.-+.|+||+||+.....|.+.. . -+..|||.+++. .+||+++|+||.+.... ....+..++.+..+
T Consensus 55 l~i~hS~DL~nW~~v~tpl~~~~~ld~kgn~~~S~giWAPdl~-y~dGkfwl~ytdvk~~~g~~k~~~nyl~t~~s~~-- 131 (549)
T COG3507 55 LAIHHSRDLVNWTLVSTPLIRTSQLDLKGNFPYSGGIWAPDLS-YHDGKFWLYYTDVKRSGGPYKNAGNYLVTAESID-- 131 (549)
T ss_pred eeeeccccccCcEEecccccCcchhhhhcccCCCCceecccee-cCCCcEEEEEecccccCCcccccccEEEEecCCC--
Confidence 34467999999999977666653 2 245789999986 58999999998764321 11122233322211
Q ss_pred cceeEEecCCceEeCCCCCCCCCCCCCEEEeecCCCeEEEEEeeeeCC------cceEEEEEeC---CCCCcEEcccccc
Q 013412 169 LKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN------EGMAFVYWSW---DFIHWTKLDHPLY 239 (443)
Q Consensus 169 l~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~~~~------~G~i~lY~S~---Dl~~W~~~g~~l~ 239 (443)
-.|+. |+.-+. ..--||.+ |+++||+-||+.+....+ .+.++-+.++ .|..+.+ + .+.
T Consensus 132 -G~WsD----pi~l~~-----~~~iDPsl-f~D~dGr~wlv~~~w~~~~~~~~~~~i~l~~~~~~~~~l~g~~~-~-~~~ 198 (549)
T COG3507 132 -GPWSD----PIKLNG-----SNAIDPSL-FFDKDGRKWLVNGSWDGGIFMHSFAGIILQEYDKTTQKLVGQGY-K-IIF 198 (549)
T ss_pred -CCccc----ceecCC-----cCccCCce-eecCCCCEEEEecccCCCcccccccceeeeeccccccccCCccc-e-eEe
Confidence 25653 443221 12469995 455899999999876532 1222222221 2233321 1 133
Q ss_pred cCCCCCeeeeCcEEEec
Q 013412 240 SVQETGMWECPDIFPVS 256 (443)
Q Consensus 240 ~~~~~~~wECPdlf~l~ 256 (443)
.+......|-|-|++-+
T Consensus 199 ~G~~~~~~EGPhl~k~~ 215 (549)
T COG3507 199 DGGNGGLTEGPHLYKKT 215 (549)
T ss_pred ccCCCccccCceeeccC
Confidence 33344578999887776
No 65
>cd08988 GH43_ABN Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla
Probab=97.67 E-value=0.0017 Score=64.05 Aligned_cols=150 Identities=10% Similarity=0.147 Sum_probs=85.2
Q ss_pred ccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCc-c-----cEeccCCCCCCCccCCCCeEeeeEEEcCCCe
Q 013412 67 INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-N-----WIHLSHALCPSGPYDINSCWSGSVTILPGDK 140 (443)
Q Consensus 67 ~NDPnG~~y~~G~YHlFyQ~~P~~~~~g~~~~Wgha~S~Dlv-~-----W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~ 140 (443)
+.-|. +.+.+|+|||||.....+. . ....|.|+|++.. - |+..++.+.+... +......+++++++||+
T Consensus 57 ~WAP~-v~~~~G~yylyys~~~~~~--~-~~~igva~s~~p~Gp~~~~~w~~~~~i~~~~~~-~~~~~iDp~~f~DdDG~ 131 (279)
T cd08988 57 LWAPD-IYQHNGKFYLYYSVSAFGS--N-TSAIGLAVNKTIDGPSPDYGWEKGGVVISSDAS-DNYNAIDPAIIFDQHGQ 131 (279)
T ss_pred Eecce-EEEECCEEEEEEEeccCCC--C-CceEEEEEcCCCCCCCcCcCccccCceEecCCC-CCCCccCCceEEcCCCC
Confidence 34455 7889999999998765432 1 4578999999864 2 5543343433322 12345788999988899
Q ss_pred EEEEEccccCCCceeEEEEEecCCCCCCcceeEEec-CCceEeCCCCCCCCCCCCCEEEeecCCCeEEEEEeeee-----
Q 013412 141 PFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFS-GNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI----- 214 (443)
Q Consensus 141 ~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~-~nPvi~~p~~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~~----- 214 (443)
++|+|.... .. ...+-.+.|... ..... ...++..+. +.....-|+ +++ .+|+|||+.+...
T Consensus 132 ~Yl~~g~~~-~g--i~~~eL~~d~~~-----~~~~~~~~~i~~~~~--~~~~~Egp~-i~k-~~g~YYl~~S~g~~~~~~ 199 (279)
T cd08988 132 PWLSFGSFW-GG--IKLFELDKDTMK-----PAEPGELHSIAGRER--SSAAIEAPF-ILY-RGDYYYLFVSFGLCCRGG 199 (279)
T ss_pred EEEEecccC-CC--EEEEEECcccCC-----ccCCCcceEEeccCC--CCCceEeeE-EEE-cCCeEEEEEEcCcccCCC
Confidence 999996431 11 122233444321 10000 011222211 112456788 556 5899999886542
Q ss_pred CCcceEEEEEeCCCC-CcEE
Q 013412 215 DNEGMAFVYWSWDFI-HWTK 233 (443)
Q Consensus 215 ~~~G~i~lY~S~Dl~-~W~~ 233 (443)
+..-.+.+++|+++. -|+.
T Consensus 200 ~~~y~v~~arS~~~~GPy~~ 219 (279)
T cd08988 200 DSTYKIAVGRSKNITGPYLD 219 (279)
T ss_pred CCCeEEEEEEeCCCCCCCCC
Confidence 112257788999874 3543
No 66
>smart00640 Glyco_32 Glycosyl hydrolases family 32.
Probab=97.62 E-value=0.0004 Score=73.07 Aligned_cols=132 Identities=17% Similarity=0.214 Sum_probs=80.9
Q ss_pred ceEECCEEEEEEEECC-CCC--CCCCCceEEEEEeCCCcccEec--cCCCCCCCccCCCCeEeeeEEEcCCCeEEEEEcc
Q 013412 73 PMYYKGVYHLFYQYNP-LGP--LFGDKMIWAHSVSYDLINWIHL--SHALCPSGPYDINSCWSGSVTILPGDKPFILYTG 147 (443)
Q Consensus 73 ~~y~~G~YHlFyQ~~P-~~~--~~g~~~~Wgha~S~Dlv~W~~~--~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~YTg 147 (443)
++..+|+|||||.-+- ..+ .......-.+|+|+|+++|+.. .++|.+...+.....-.+.++..++|+++|++.+
T Consensus 74 av~~~~~~~~~YTg~~~~~~~~~~~~~~~~~~ass~d~~~w~k~~~~Pvi~~~p~~~~~~fRDP~Vf~~~~~~~~m~~g~ 153 (437)
T smart00640 74 AVIDPGNLSLLYTGNVAIDTNVQVQRQAQQLAASDDLGGTWTKYPGNPVLVPPPGIGTEHFRDPKVFWYDGDKWYMVIGA 153 (437)
T ss_pred EEECCCceEEEEcCCcccccccCcccEEEEEEEECCCCCeeEECCCCcEEeCCCCCCCCCcCCCCccEECCCEEEEEEEE
Confidence 4456888999998762 111 1220122367889999999997 4666554322222334566665444689999886
Q ss_pred ccCCCceeEEEEEecCCCCCCcceeEEecCCceEeCCCCCCCCCCCCCEEEeecCCC-----eEEEEEeee
Q 013412 148 IDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDG-----RWRVLVGGQ 213 (443)
Q Consensus 148 ~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~~~g-----~~~Mv~ga~ 213 (443)
...+..-.+.++.|+|+ ++|+.. .++.....+.....+.-|- ++. -++ +|+|+++..
T Consensus 154 ~~~~~~G~i~ly~S~Dl-----~~W~~~--~~~~~~~~~~~g~~wECPd-lf~-l~~~~~~~~~vLi~s~~ 215 (437)
T smart00640 154 SDEDKTGIALLYRSTDL-----KNWTLL--GELLHSGVGDTGGMWECPD-LFP-LPGDGDTSKHVLKVSPQ 215 (437)
T ss_pred EecCCCeEEEEEECCCc-----ccCeEC--CcccccCCCCccceEECCc-EEE-eCCCCCceeEEEEECcC
Confidence 55444556778888885 799875 3554321111114567776 333 344 899999776
No 67
>cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=97.60 E-value=0.0023 Score=62.80 Aligned_cols=132 Identities=11% Similarity=0.088 Sum_probs=78.9
Q ss_pred CCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCc-ccEeccCCCCCCCccCCCCeEeeeEEEcCCCeEEEEEcc
Q 013412 69 DPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTG 147 (443)
Q Consensus 69 DPnG~~y~~G~YHlFyQ~~P~~~~~g~~~~Wgha~S~Dlv-~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~YTg 147 (443)
-|. +++.+|+|||||-.+. .+.+.++|++.. .|++.+... ....+++++++||+.+|+|.+
T Consensus 78 AP~-v~~~~gkyy~yys~~~--------~~~~v~~a~~p~Gpw~~~~~~~---------~~iDp~~f~D~dG~~Yl~~~~ 139 (269)
T cd09001 78 APS-LRYHNGTFYVFFCTNT--------GGTYIYTADDPEGPWTKTALDG---------GYHDPSLLFDDDGTAYLVYGG 139 (269)
T ss_pred CCc-eEEECCEEEEEEEecC--------CCeEEEEcCCCCCCCcCCCcCC---------CcccCceEEcCCCCEEEEeCC
Confidence 455 7889999999997751 124567777754 777654321 235678888889999999975
Q ss_pred ccCCCceeEEEE-EecCCCCCCcceeEEecCCceEeCCCCCCCCCCCCCEEEeecCCCeEEEEEeeeeCCcceEEEEEeC
Q 013412 148 IDASGQQVQNLA-MPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSW 226 (443)
Q Consensus 148 ~~~~~~~~q~lA-~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~~~~~G~i~lY~S~ 226 (443)
. .+.++ .+.|. ..... ....++..+.. ......-|+ +++ .+|+|||++.+.......+.+++|+
T Consensus 140 ~------~i~~~~l~~d~-----~~~~~-~~~~~~~~~~~-~~~~~Egp~-i~k-~~G~YYl~~S~~~~~~~~~~~~~s~ 204 (269)
T cd09001 140 G------TIRLVELSPDL-----TGVGG-KDQVIIDAGEE-IGLGAEGSH-LYK-INGYYYIFNIAWGGGGRTQTCLRSK 204 (269)
T ss_pred C------cEEEEEECccc-----CCcCC-CceEEEeCCCc-cccccccCe-EEE-ECCEEEEEEecCCCCCceEEEEEeC
Confidence 3 23333 34443 22211 11223333211 123457788 456 5899999987653222355678998
Q ss_pred CCC-CcEE
Q 013412 227 DFI-HWTK 233 (443)
Q Consensus 227 Dl~-~W~~ 233 (443)
++. -|+.
T Consensus 205 ~~~GP~~~ 212 (269)
T cd09001 205 SLTGPYES 212 (269)
T ss_pred CCCCCcCC
Confidence 864 3544
No 68
>cd08980 GH43_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=97.58 E-value=0.0034 Score=62.03 Aligned_cols=125 Identities=14% Similarity=0.176 Sum_probs=70.5
Q ss_pred ceEECCEEEEEEEECCCCCCCCCCceEEEEEeCC----CcccEeccCCCCCCCccCCCCeEeeeEEEcCCCeEEEEEccc
Q 013412 73 PMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYD----LINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGI 148 (443)
Q Consensus 73 ~~y~~G~YHlFyQ~~P~~~~~g~~~~Wgha~S~D----lv~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~ 148 (443)
+.+.+|+|||||...-.+.. . ....+.++|++ +-.|+..+..+.+. ......++++.+ +|+++++|.+.
T Consensus 60 i~~~~g~yylyys~~~~~~~-~-~~~~~v~~a~~~~~~~Gpw~~~~~~~~~~----~~~~iDp~~~~d-dG~~Yl~~~~~ 132 (288)
T cd08980 60 LHYIDGKWYIYFAAGDGGGN-A-NHRMYVLENAGADPPTGPWTFKGRLADPT----DRWAIDGTVFEH-NGQLYFVWSGW 132 (288)
T ss_pred EEEECCEEEEEEEccCCCCC-c-ceeEEEEEeCCCCCCCCCceEeeEeccCC----CCeeeeeEEEEE-CCEEEEEEEcc
Confidence 57789999999975533211 1 34456666664 56899875544221 123577888875 79999999864
Q ss_pred cC--CCceeEEEEEecCCCCCCcceeEEecCCce-EeCCC-CCCC---CCCCCCEEEeecCCCeEEEEEeeee
Q 013412 149 DA--SGQQVQNLAMPENLSDPLLKDWVKFSGNPV-MTPPN-GVKD---DMFRDPTTAWQAPDGRWRVLVGGQI 214 (443)
Q Consensus 149 ~~--~~~~~q~lA~s~D~~d~~l~~w~k~~~nPv-i~~p~-~~~~---~~fRDP~Vvw~~~~g~~~Mv~ga~~ 214 (443)
.. ...+.+.++...+. .++. +.++ +..+. .++. .-..-|+++ + .+|.|||++++..
T Consensus 133 ~~~~~~~~~i~~~~l~~~-----~~~~---g~~~~i~~p~~~we~~~~~~~EgP~~~-k-~~G~yYl~yS~~~ 195 (288)
T cd08980 133 EGRTNGNQNLYIAKMSNP-----WTLT---GPRVLISRPEYDWERQGPGVNEGPAAL-K-RNGKVFLTYSASG 195 (288)
T ss_pred CCCCCCCccEEEEECCCC-----CccC---CcceEecCCCCCceecCceeeECcEEE-E-ECCEEEEEEECCC
Confidence 32 12233344443332 2232 2233 22221 1211 124567744 4 3699999998754
No 69
>PF03664 Glyco_hydro_62: Glycosyl hydrolase family 62 ; InterPro: IPR005193 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha -L-arabinofuranosidases (3.2.1.55 from EC) which are all members of glycoside hydrolase family 62 (GH62 from CAZY). This enzyme hydrolyzed aryl alpha-L-arabinofuranosides and cleaves arabinosyl side chains from arabinoxylan and arabinan.; GO: 0046556 alpha-N-arabinofuranosidase activity, 0046373 L-arabinose metabolic process
Probab=97.36 E-value=0.012 Score=56.19 Aligned_cols=185 Identities=15% Similarity=0.240 Sum_probs=101.6
Q ss_pred eecCCCCc--cCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCccCCCCeEeeeEEE-c
Q 013412 60 FRPPQNWI--NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTI-L 136 (443)
Q Consensus 60 ~~p~~gw~--NDPnG~~y~~G~YHlFyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~aL~P~~~~D~~gv~SGsav~-~ 136 (443)
..|+.||. .||- +++++|+||+|....-.+..|| -..=..+-+|.+...| +..-.+. +.-.+.++. .
T Consensus 16 ~~Pk~g~~slKD~T-~V~ynGk~~VyAtt~d~~~~y~------sm~f~~Ftdws~~~sA--~q~~m~~-~~vAP~vFYFa 85 (271)
T PF03664_consen 16 AQPKSGWVSLKDFT-IVPYNGKHHVYATTADTGGGYG------SMNFGPFTDWSQMASA--SQNYMDQ-SAVAPQVFYFA 85 (271)
T ss_pred ccCCCCceeccCce-EEeECCEEEEEEEeccCCCccc------eEeeeccCCHHHhhcc--ccccCCc-ccccceEEEec
Confidence 34777996 5999 9999999999998764444444 3333345678776543 2221222 122333332 2
Q ss_pred CCCeEEEEEccccCCCceeEEEEEecCCCCCCcceeEEecCCceEeCCCCCCCCCCCCCEEEeecCCCeEEEEEeeeeCC
Q 013412 137 PGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN 216 (443)
Q Consensus 137 ~dg~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~~~~ 216 (443)
+.+..||.|--.. ..-...+++|..+| ..|... .|++.....-.....-|..||-+ +..-||+....
T Consensus 86 Pk~~W~L~yQwg~----~~fsY~Ts~Dptnp--ngWSap--q~lf~g~i~~~~~g~iD~~vI~D--~~n~yLFfa~D--- 152 (271)
T PF03664_consen 86 PKNIWYLAYQWGP----AAFSYSTSSDPTNP--NGWSAP--QPLFSGSISGSGTGPIDQWVICD--DTNMYLFFAGD--- 152 (271)
T ss_pred CCcEEEEEEecCC----CcceeecCCCCCCC--ccCCCC--cccccccccCCCCCceeeEEEec--CCceEEEEcCC---
Confidence 5677888886321 11123466777766 468763 45643211111245689887744 33445555432
Q ss_pred cceEEEEEeCC-CCCc----EEcccccccCCCCCeeeeCcEEEeccCCccceeeccCCCceeeEEEEeeCC
Q 013412 217 EGMAFVYWSWD-FIHW----TKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS 282 (443)
Q Consensus 217 ~G~i~lY~S~D-l~~W----~~~g~~l~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vL~~s~~~ 282 (443)
.| .||||.- +-+. .-....+.+......+|.++++++. | ..++.|++...+
T Consensus 153 nG--kiYRs~~~i~nFP~~fgs~~~vvmsd~~~nLFEA~~VYkv~--G-----------~~~YLmiVEaiG 208 (271)
T PF03664_consen 153 NG--KIYRSSMPIGNFPGGFGSSYTVVMSDTRNNLFEAVQVYKVK--G-----------QNQYLMIVEAIG 208 (271)
T ss_pred CC--cEEEeccchhhCCCCCCCceEEEEecCccceeeeeEEEEEc--C-----------CceEEEEEEEec
Confidence 25 3898842 2222 1001112222334579999999997 4 237777776544
No 70
>cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=97.33 E-value=0.0084 Score=59.28 Aligned_cols=143 Identities=15% Similarity=0.053 Sum_probs=83.9
Q ss_pred ccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCC-cccEeccCCCCCCCccCCCCeEeeeEEEcCCCeEEEEE
Q 013412 67 INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDL-INWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILY 145 (443)
Q Consensus 67 ~NDPnG~~y~~G~YHlFyQ~~P~~~~~g~~~~Wgha~S~Dl-v~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~Y 145 (443)
+.-|. +++.+|+|||||...... + ....+.++|+|. -.|++. . +.+. .+..++++.++||+.+|+|
T Consensus 68 ~WAP~-v~~~~g~yy~yy~~~~~~--~--~~~~~v~~s~~p~gpw~~~-~-~~~~------~~iDp~vf~d~dG~~Y~~~ 134 (288)
T cd09000 68 IWAPT-IRYHDGTFYLITTNVDGM--K--DGGNFIVTADDPAGPWSDP-V-WLDS------GGIDPSLFFDDDGKVYLVG 134 (288)
T ss_pred eEcce-EEEECCEEEEEEEecCCC--C--CCceEEEEeCCCCCCCcCC-E-ecCC------CccCCceeEcCCCCEEEEe
Confidence 34466 788999999999876532 2 345667889887 377742 1 2222 4567888887789999988
Q ss_pred ccccCC----CceeEEEEEecCCCCCCcceeEEecCCc--eEeCCCCCCCCCCCCCEEEeecCCCeEEEEEeeeeC-Ccc
Q 013412 146 TGIDAS----GQQVQNLAMPENLSDPLLKDWVKFSGNP--VMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID-NEG 218 (443)
Q Consensus 146 Tg~~~~----~~~~q~lA~s~D~~d~~l~~w~k~~~nP--vi~~p~~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~~~-~~G 218 (443)
...... ....+.++..+.. .++- .+.| +..... .....-|. +++ .+|+|||++..... ..-
T Consensus 135 ~~~~~~~~~~~~~~i~~~~l~~~------~~~~-~~~~~~~~~~~~---~~~~Egp~-v~k-~~g~YYl~ys~~~~~~~~ 202 (288)
T cd09000 135 NGWDERRGYNGHGGIWLQEIDLE------TGKL-LGEPKVIWNGTG---GRWPEGPH-LYK-RDGWYYLLIAEGGTGYGH 202 (288)
T ss_pred cccCCccccCCCCcEEEEEEccc------cCCC-CCCcEEEEeCCC---CCCcccCe-EEE-ECCEEEEEEecCCCCCCe
Confidence 654221 1233444433221 1211 1222 221111 12346788 456 58999999865432 123
Q ss_pred eEEEEEeCCCC-CcEEc
Q 013412 219 MAFVYWSWDFI-HWTKL 234 (443)
Q Consensus 219 ~i~lY~S~Dl~-~W~~~ 234 (443)
.+.+++|+++. .|+..
T Consensus 203 ~v~~~~s~~~~Gp~~~~ 219 (288)
T cd09000 203 SVTVARSRSITGPYEPA 219 (288)
T ss_pred EEEEEEeCCCCCCCccC
Confidence 57788999886 67654
No 71
>cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases.
Probab=97.21 E-value=0.017 Score=58.52 Aligned_cols=166 Identities=19% Similarity=0.173 Sum_probs=99.0
Q ss_pred CCcccceeeecCC---CCccCCCcceEEC-CEEEEEEEECCCCC-------CCCCCceEEEEEeCCC-cccEeccCCCCC
Q 013412 52 QPYLTSYHFRPPQ---NWINDPNGPMYYK-GVYHLFYQYNPLGP-------LFGDKMIWAHSVSYDL-INWIHLSHALCP 119 (443)
Q Consensus 52 ~~~Rp~yH~~p~~---gw~NDPnG~~y~~-G~YHlFyQ~~P~~~-------~~g~~~~Wgha~S~Dl-v~W~~~~~aL~P 119 (443)
..|.+.--+.... ..+.||. ++... |+-+|||...+... .+. ..+..+..|+|. .+|... ..|.+
T Consensus 58 ~tW~~~~~i~~~~~~~~~~~~p~-~v~~~~g~l~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~S~D~G~tW~~p-~~l~~ 134 (351)
T cd00260 58 KTWSPSTVISDGDGKSSRVKDPT-VVVDGLGRVFLLVGSFPNGEGEDNDYAGPS-NAYLVLVYSDDDGITWSSP-RDLTP 134 (351)
T ss_pred CcccccEEehhcCCCCCcEEcce-EEEcCCCCEEEEEEECCCcccccccccCCC-ceEEEEEEEEcCCceecCC-ccCCc
Confidence 4666654444332 3567888 77776 99999998877542 123 456677888775 899753 33433
Q ss_pred CCc-cCCCCeE--eeeEEEcCCCeEEEEEccccCCCceeEEEEEecCCCCCCcceeEEecCCceEeCCCCCCCCCCCCCE
Q 013412 120 SGP-YDINSCW--SGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPT 196 (443)
Q Consensus 120 ~~~-~D~~gv~--SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~ 196 (443)
... .+....+ .|+.+...+|++++.+.+....+.....+.+|+|.| ++|+... ++. + ......|.
T Consensus 135 ~~~~~~~~~~~~~~g~gi~l~~Grlv~p~~~~~~~~~~~~~~~~S~D~G----~tW~~~~--~~~--~----~~~~~e~~ 202 (351)
T cd00260 135 SVKGDNWAALFTGPGSGIQMKDGRLVFPVYGGNAGGRVSSAIIYSDDSG----KTWKLGE--GVN--D----AGGCSECS 202 (351)
T ss_pred cccCcceeEEEecCcCeEEecCCcEEEEEEEEcCCCCEEEEEEEECCCC----CCcEECC--CCC--C----CCCCcCCE
Confidence 321 1111222 334555568888775544332334556678899876 7997532 111 1 12345688
Q ss_pred EEeecCCCeEEEEEeeeeCCcceEEEEEeCC-CCCcEEcc
Q 013412 197 TAWQAPDGRWRVLVGGQIDNEGMAFVYWSWD-FIHWTKLD 235 (443)
Q Consensus 197 Vvw~~~~g~~~Mv~ga~~~~~G~i~lY~S~D-l~~W~~~g 235 (443)
++-. .+|+.+|+..... .+...++.|.| ..+|+...
T Consensus 203 i~el-~dG~l~~~~R~~~--~~~~~~~~S~D~G~tWs~~~ 239 (351)
T cd00260 203 VVEL-SDGKLYMYTRDNS--GGRRPVYESRDMGTTWTEAL 239 (351)
T ss_pred EEEe-cCCEEEEEEeeCC--CCcEEEEEEcCCCcCcccCc
Confidence 5533 5888888776542 35566788876 48998653
No 72
>PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A ....
Probab=97.16 E-value=0.0045 Score=60.25 Aligned_cols=148 Identities=20% Similarity=0.231 Sum_probs=87.8
Q ss_pred ccCCCcceE-ECCEEEEEEEECCCCCCCCCCceEEEEEeCC-CcccEeccCCCCCCCccCCCCeEeeeEEEcCCCeEEEE
Q 013412 67 INDPNGPMY-YKGVYHLFYQYNPLGPLFGDKMIWAHSVSYD-LINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFIL 144 (443)
Q Consensus 67 ~NDPnG~~y-~~G~YHlFyQ~~P~~~~~g~~~~Wgha~S~D-lv~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~ 144 (443)
..||. +++ .+|+.||||........|. .....+.+|+| ..+|.... .|.+.......+...+.++...+|++++-
T Consensus 48 ~~~p~-~~~~~~g~l~l~~~~~~~~~~~~-~~~~~~~~S~D~G~TWs~~~-~l~~~~~~~~~~~~~~~~i~~~~G~l~~~ 124 (275)
T PF13088_consen 48 YGNPS-LVVDPDGRLWLFYSAGSSGGGWS-GSRIYYSRSTDGGKTWSEPT-DLPPGWFGNFSGPGRGPPIQLPDGRLIAP 124 (275)
T ss_dssp EEEEE-EEEETTSEEEEEEEEEETTESCC-TCEEEEEEESSTTSS-EEEE-EEHHHCCCSCEECSEEEEEEECTTEEEEE
T ss_pred ccCcE-EEEeCCCCEEEEEEEccCCCCCC-ceeEEEEEECCCCCCCCCcc-ccccccccceeccceeeeeEecCCCEEEE
Confidence 45676 555 4999999996665544444 44545599998 89999864 22222111222334554455578887665
Q ss_pred -EccccCCCceeEEEEEecCCCCCCcceeEEecCCceEeCCCCCCCCCCCCCEEEeecCCCeEEEEEeeeeCCcceEEEE
Q 013412 145 -YTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVY 223 (443)
Q Consensus 145 -YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~~~~~G~i~lY 223 (443)
|.. . .......+.+|+|++ ++|+... ++. . ....--|.++ ...+|+.+|++... . .+.+.++
T Consensus 125 ~~~~-~-~~~~~~~~~~S~D~G----~tW~~~~--~~~--~----~~~~~e~~~~-~~~dG~l~~~~R~~-~-~~~~~~~ 187 (275)
T PF13088_consen 125 YYHE-S-GGSFSAFVYYSDDGG----KTWSSGS--PIP--D----GQGECEPSIV-ELPDGRLLAVFRTE-G-NDDIYIS 187 (275)
T ss_dssp EEEE-S-SCEEEEEEEEESSTT----SSEEEEE--ECE--C----SEEEEEEEEE-EETTSEEEEEEEEC-S-STEEEEE
T ss_pred Eeec-c-ccCcceEEEEeCCCC----ceeeccc--ccc--c----cCCcceeEEE-ECCCCcEEEEEEcc-C-CCcEEEE
Confidence 443 1 234566788899987 8998753 221 0 1122345533 33688888887653 2 2266777
Q ss_pred EeCC-CCCcEEc
Q 013412 224 WSWD-FIHWTKL 234 (443)
Q Consensus 224 ~S~D-l~~W~~~ 234 (443)
+|.| +.+|+..
T Consensus 188 ~S~D~G~TWs~~ 199 (275)
T PF13088_consen 188 RSTDGGRTWSPP 199 (275)
T ss_dssp EESSTTSS-EEE
T ss_pred EECCCCCcCCCc
Confidence 8876 6999863
No 73
>cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases. The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr
Probab=96.92 E-value=0.025 Score=55.93 Aligned_cols=142 Identities=15% Similarity=0.246 Sum_probs=79.3
Q ss_pred CCCcceEE--CCEEEEEEEECCCCCCCCCCceEEEEEeCCCc---ccEeccCCCCCCCccCCCCeEeeeEEEcCCCeEEE
Q 013412 69 DPNGPMYY--KGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI---NWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFI 143 (443)
Q Consensus 69 DPnG~~y~--~G~YHlFyQ~~P~~~~~g~~~~Wgha~S~Dlv---~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l 143 (443)
-|. ++|+ +++|+|+||+.+ ...+||+|.. .|....+.+.........|...-.+ +.+|+++||
T Consensus 80 APq-Vfyf~pk~kwYL~Yq~~~----------~~yaTs~dp~~P~~ws~~qpl~~~~~~~~~~~~ID~~v-I~Dd~~~YL 147 (303)
T cd08987 80 APQ-VFYFAPQNKWYLIYQWWP----------AAYSTNSDISNPNGWSAPQPLFSGTPNGSPGGWIDFWV-ICDDTNCYL 147 (303)
T ss_pred cCE-EeeeccCCEEEEEEecCc----------eEEEeCCCCCCCCccCCCcccccCcccCCCCCccceeE-EeCCCCEEE
Confidence 455 7765 599999999632 4579998865 5776554443322222234455555 567999999
Q ss_pred EEccccCCCceeEEEEEecCCCCCCcceeEEecCCceEeCCCCCCCCCCCCCEEEeecCCC--eEEEEEeeeeCCcce-E
Q 013412 144 LYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDG--RWRVLVGGQIDNEGM-A 220 (443)
Q Consensus 144 ~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~~~g--~~~Mv~ga~~~~~G~-i 220 (443)
|+.+-+ + .+..|....+ .|......++.....+-...-|.-|.| ++ .+| +|+|++-+.....++ .
T Consensus 148 ff~~dn--G--~iyra~~~~~------nFp~~~~~~~~~~~~~~~~~lfEa~~V-yk-v~G~~~YlmiveA~g~~~~rYf 215 (303)
T cd08987 148 FFSDDN--G--KLYRSSTTLG------NFPNGGTETVIIMSDSNKNNLFEASNV-YK-VKGQNQYLLIVEAIGSDGGRYF 215 (303)
T ss_pred EEecCC--C--eEEEEecchh------hCCCCCCccEEEecCCCccccceeeEE-EE-ECCCeEEEEEEEecCCCCCCeE
Confidence 998743 2 4444533221 222211223321111111246778884 55 455 999999776432221 1
Q ss_pred EEEEeCCC-CCcEEc
Q 013412 221 FVYWSWDF-IHWTKL 234 (443)
Q Consensus 221 ~lY~S~Dl-~~W~~~ 234 (443)
.-++|+.| -.|+..
T Consensus 216 rs~Ts~Sl~GpWt~~ 230 (303)
T cd08987 216 RSWTATSLDGPWTPL 230 (303)
T ss_pred EEEEcCCCCCCceec
Confidence 22667776 478865
No 74
>cd08982 GH43_3 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=96.69 E-value=0.023 Score=56.73 Aligned_cols=79 Identities=11% Similarity=0.135 Sum_probs=48.1
Q ss_pred CeEeeeEEEcCCCeEEEEEccccCC-CceeEEEEEecCCCCCCcceeEEecCCceEeCCCCCCCCCCCCCEEEeecCCCe
Q 013412 127 SCWSGSVTILPGDKPFILYTGIDAS-GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGR 205 (443)
Q Consensus 127 gv~SGsav~~~dg~~~l~YTg~~~~-~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~~~g~ 205 (443)
++.-|..+...+|+++|+|++.... ..-.+.+|+|++.-+ .|++.+.+||+..+.+. ...--... ++...+|+
T Consensus 159 ~~~EGP~i~k~~G~YYL~yS~~~~~~~~Y~v~~a~s~~p~G----P~~~~~~~pil~~~~~~-~~g~GH~s-~v~~~~G~ 232 (295)
T cd08982 159 PWMEGAWMTKHNGKYYLQYAAPGTEFNTYADGVYVSDSPLG----PFTYQPHNPFSYKPGGF-ITGAGHGS-TFQDKYGN 232 (295)
T ss_pred ccccccEEEEECCEEEEEEeCCCcccCcEeEEEEEeCCCCC----CCCcCCCCccccCCCCe-EecCCccc-EEECCCCC
Confidence 3566777777899999999864322 223567899887643 56665568887543221 01112233 34557788
Q ss_pred EEEEEe
Q 013412 206 WRVLVG 211 (443)
Q Consensus 206 ~~Mv~g 211 (443)
|+++.=
T Consensus 233 ~~~~yh 238 (295)
T cd08982 233 YWHVGT 238 (295)
T ss_pred EEEEEE
Confidence 888763
No 75
>PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure []. ; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A ....
Probab=96.56 E-value=0.059 Score=53.98 Aligned_cols=117 Identities=17% Similarity=0.232 Sum_probs=69.9
Q ss_pred eeEEEcCCCeEEEEEccccCC---CceeEEEEEecCCCCCCcceeEEecCCceEeCCCCCCCCCCCCCEEEeecCCCeEE
Q 013412 131 GSVTILPGDKPFILYTGIDAS---GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWR 207 (443)
Q Consensus 131 Gsav~~~dg~~~l~YTg~~~~---~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~~~g~~~ 207 (443)
...++..+|+++|||--+-.. +...-++|+|+|. ++|+..+ ++|.+....+....--..++.. ++.++
T Consensus 12 PnG~~~~~G~yHlFyQ~~P~~~~~g~~~WgHa~S~Dl-----v~W~~~~--~aL~P~~~~d~~g~~SGs~~~~--~~~~~ 82 (308)
T PF00251_consen 12 PNGLVYYDGKYHLFYQYNPFGPEWGNMHWGHATSKDL-----VHWEHLP--VALPPDEEYDADGCFSGSAVVD--DDNLV 82 (308)
T ss_dssp EEEEEEETTEEEEEEEEETTSSSS-SBEEEEEEESSS-----SSEEEEE--EEE-SSSGGGTTEEEEEEEEEE--TTCEE
T ss_pred CccCeEeCCEEEEEeccCCCCcccceeEEEEEECCCC-----CCceeCC--ceEcccccCCcCccCcceEEEE--CCEEE
Confidence 333444699999999754321 3455689999996 8999863 6665543322222233333333 44788
Q ss_pred EEEeeeeCC-cceEEEEEe-CCCCCcEEcc--cccccC---CCCCeeeeCcEEEec
Q 013412 208 VLVGGQIDN-EGMAFVYWS-WDFIHWTKLD--HPLYSV---QETGMWECPDIFPVS 256 (443)
Q Consensus 208 Mv~ga~~~~-~G~i~lY~S-~Dl~~W~~~g--~~l~~~---~~~~~wECPdlf~l~ 256 (443)
|++.+.... .....+..| +|+.+|+... .++... .....|.=|.+|...
T Consensus 83 ~~YTg~~~~~~~~q~~A~s~d~~~~w~k~~~~~pvi~~~p~~~~~~~RDP~v~~~~ 138 (308)
T PF00251_consen 83 LFYTGNNRDGKQVQCLAYSTDDGITWTKYPQGNPVIPEPPPGDTTDFRDPKVFWRE 138 (308)
T ss_dssp EEEEEEETTTEEEEEEEEESSTTSSEEE-TTTCESBESSSTTSCTSEEEEEEEEEC
T ss_pred EEEeccCCCCCeEEEEEEECCCCCceEEcCCCCcEEEecccCCCCccccCeEEEec
Confidence 888766532 334456667 8899999854 444321 233467788886554
No 76
>PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A ....
Probab=96.55 E-value=0.086 Score=51.18 Aligned_cols=161 Identities=16% Similarity=0.099 Sum_probs=85.3
Q ss_pred CEEEEEEEECCCCCCCCCCceEEEEEe--CCC-cccEeccCCCCCCCccCCCCeEeeeEEEcCCCeEEEEEccccCC---
Q 013412 78 GVYHLFYQYNPLGPLFGDKMIWAHSVS--YDL-INWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDAS--- 151 (443)
Q Consensus 78 G~YHlFyQ~~P~~~~~g~~~~Wgha~S--~Dl-v~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~--- 151 (443)
|+...++.. +...+ .....-.+| +|. .+|.....+..+. .....+..++++.+.+|+++|+|+.....
T Consensus 1 G~l~a~~~~---~~~~~-~~d~~i~~S~s~D~G~tWs~~~~v~~~~--~~~~~~~~p~~~~~~~g~l~l~~~~~~~~~~~ 74 (275)
T PF13088_consen 1 GRLLAVWEG---GSDEG-AIDIVIRRSRSTDGGKTWSEPRIVADGP--KPGRRYGNPSLVVDPDGRLWLFYSAGSSGGGW 74 (275)
T ss_dssp SEEEEEEEE---SSCSC-CEEEEEEEECCCCCTTEEEEEEEEETST--BTTCEEEEEEEEEETTSEEEEEEEEEETTESC
T ss_pred CeEEEEEEC---CcccC-CCCEEEEEEEeeCCCCeeCCCEEEeecc--ccCCcccCcEEEEeCCCCEEEEEEEccCCCCC
Confidence 556666665 22333 344444455 886 7899875444333 12345677777777799999999544321
Q ss_pred CceeEEEEEecCCCCCCcceeEEecCCceEeCCCCCCCCCCCCCEEEeecCCCeEEEEEeeeeCCcceEEEEEe-CCCCC
Q 013412 152 GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWS-WDFIH 230 (443)
Q Consensus 152 ~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~~~~~G~i~lY~S-~Dl~~ 230 (443)
........+|+|+| ++|+... .|...+........+.+- +-. .+|++++..-........+.++.| ++.+.
T Consensus 75 ~~~~~~~~~S~D~G----~TWs~~~--~l~~~~~~~~~~~~~~~~-i~~-~~G~l~~~~~~~~~~~~~~~~~~S~D~G~t 146 (275)
T PF13088_consen 75 SGSRIYYSRSTDGG----KTWSEPT--DLPPGWFGNFSGPGRGPP-IQL-PDGRLIAPYYHESGGSFSAFVYYSDDGGKT 146 (275)
T ss_dssp CTCEEEEEEESSTT----SS-EEEE--EEHHHCCCSCEECSEEEE-EEE-CTTEEEEEEEEESSCEEEEEEEEESSTTSS
T ss_pred CceeEEEEEECCCC----CCCCCcc--ccccccccceeccceeee-eEe-cCCCEEEEEeeccccCcceEEEEeCCCCce
Confidence 12222348999976 8999853 332221111112234432 323 488877763222222344555555 45799
Q ss_pred cEEcccccccCCCCCeeeeCcEEEec
Q 013412 231 WTKLDHPLYSVQETGMWECPDIFPVS 256 (443)
Q Consensus 231 W~~~g~~l~~~~~~~~wECPdlf~l~ 256 (443)
|+.... +. .....--|.+++++
T Consensus 147 W~~~~~-~~---~~~~~~e~~~~~~~ 168 (275)
T PF13088_consen 147 WSSGSP-IP---DGQGECEPSIVELP 168 (275)
T ss_dssp EEEEEE-CE---CSEEEEEEEEEEET
T ss_pred eecccc-cc---ccCCcceeEEEECC
Confidence 987643 21 11122335566665
No 77
>cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases.
Probab=95.31 E-value=3 Score=42.07 Aligned_cols=147 Identities=14% Similarity=0.128 Sum_probs=82.6
Q ss_pred CceEEEEEeCC-CcccEeccCCCCCCCccCCCCeEeeeEEEcCCCeEEEEEccccCC----------CceeEEEEEecCC
Q 013412 96 KMIWAHSVSYD-LINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDAS----------GQQVQNLAMPENL 164 (443)
Q Consensus 96 ~~~Wgha~S~D-lv~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~----------~~~~q~lA~s~D~ 164 (443)
.+.....+|.| ..+|... .+|..... ....+..++.+.+.+|+++++|...... ....+.+..|+|.
T Consensus 45 ~~~iv~~~S~D~G~tW~~~-~~i~~~~~-~~~~~~~p~~v~~~~g~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~ 122 (351)
T cd00260 45 AIDIVARRSTDGGKTWSPS-TVISDGDG-KSSRVKDPTVVVDGLGRVFLLVGSFPNGEGEDNDYAGPSNAYLVLVYSDDD 122 (351)
T ss_pred ccceeEEEeccCCCccccc-EEehhcCC-CCCcEEcceEEEcCCCCEEEEEEECCCcccccccccCCCceEEEEEEEEcC
Confidence 35677778887 5899986 33434322 2345778888876448999999765321 2345678889988
Q ss_pred CCCCcceeEEecCCceEeCC--CCCCCCCCCCCE-EEeecCCCeEEEEEeeeeCC--cceEEEEEeCCCCCcEEcccccc
Q 013412 165 SDPLLKDWVKFSGNPVMTPP--NGVKDDMFRDPT-TAWQAPDGRWRVLVGGQIDN--EGMAFVYWSWDFIHWTKLDHPLY 239 (443)
Q Consensus 165 ~d~~l~~w~k~~~nPvi~~p--~~~~~~~fRDP~-Vvw~~~~g~~~Mv~ga~~~~--~G~i~lY~S~Dl~~W~~~g~~l~ 239 (443)
| .+|.+. ..+.... ..+ ..-++-|- .+-. ++|++++.+-..... .-...+|..++.++|+... ...
T Consensus 123 G----~tW~~p--~~l~~~~~~~~~-~~~~~~~g~gi~l-~~Grlv~p~~~~~~~~~~~~~~~~S~D~G~tW~~~~-~~~ 193 (351)
T cd00260 123 G----ITWSSP--RDLTPSVKGDNW-AALFTGPGSGIQM-KDGRLVFPVYGGNAGGRVSSAIIYSDDSGKTWKLGE-GVN 193 (351)
T ss_pred C----ceecCC--ccCCccccCcce-eEEEecCcCeEEe-cCCcEEEEEEEEcCCCCEEEEEEEECCCCCCcEECC-CCC
Confidence 6 799753 2222111 111 11223331 1222 478887776544322 2234455555679998642 221
Q ss_pred cCCCCCeeeeCcEEEec
Q 013412 240 SVQETGMWECPDIFPVS 256 (443)
Q Consensus 240 ~~~~~~~wECPdlf~l~ 256 (443)
. ...+.| |.+++++
T Consensus 194 ~--~~~~~e-~~i~el~ 207 (351)
T cd00260 194 D--AGGCSE-CSVVELS 207 (351)
T ss_pred C--CCCCcC-CEEEEec
Confidence 1 133455 6788986
No 78
>PF13859 BNR_3: BNR repeat-like domain; PDB: 3B69_A.
Probab=94.11 E-value=0.32 Score=48.92 Aligned_cols=141 Identities=19% Similarity=0.242 Sum_probs=69.3
Q ss_pred EECCEEEEEE-EECCCCCCCCCCceE--EEEEeCC-CcccEeccCCCCCC-CccCCCCeE--eeeEEEcCCCeEEEEEcc
Q 013412 75 YYKGVYHLFY-QYNPLGPLFGDKMIW--AHSVSYD-LINWIHLSHALCPS-GPYDINSCW--SGSVTILPGDKPFILYTG 147 (443)
Q Consensus 75 y~~G~YHlFy-Q~~P~~~~~g~~~~W--gha~S~D-lv~W~~~~~aL~P~-~~~D~~gv~--SGsav~~~dg~~~l~YTg 147 (443)
..++..+|+. .|+... + ...| -++.|+| .+.|.+....+... +... ..+ -||.|+.+||++++=-.+
T Consensus 67 vkgn~IymLvG~y~~~~---~-~~~~~llLvks~~~g~~W~~~~~l~~~~~~~~~--~figgGGSGV~m~dGTLVFPv~a 140 (310)
T PF13859_consen 67 VKGNKIYMLVGSYSRSA---G-ADDWGLLLVKSTDGGIKWGDTKSLPSTSFQSWK--QFIGGGGSGVVMEDGTLVFPVQA 140 (310)
T ss_dssp EETTEEEEEEEEESS-----S-STTEEEEEEEEESSSSEE---EE-GGGS-EEEE--EEEE-SEE-EE-TTS-EEEEEEE
T ss_pred ecceeEEEEEEEEeccc---c-ccccceeeeeccCCcceeeecccCCchhccccc--eeecCCCCceEEcCCCEEEEEee
Confidence 3455555665 555322 2 2234 3556655 56898753221111 1101 111 245566679998877666
Q ss_pred ccCCCc-eeEEEEEecCCCCCCcceeEEecCCceEeCCCCCCCCCCCCCEEEeecCCCeEEEEEeeeeCCcceEEEEEeC
Q 013412 148 IDASGQ-QVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSW 226 (443)
Q Consensus 148 ~~~~~~-~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~~~~~G~i~lY~S~ 226 (443)
...++. ..-.|.+|+|.+ .+|+-.++. .....+||.|+.. ++|+-.|+.... .|.-.+|+|.
T Consensus 141 ~~~~~~~~~SlIiYS~d~g----~~W~lskg~---------s~~gC~~psv~EW-e~gkLlM~~~c~---~g~rrVYeS~ 203 (310)
T PF13859_consen 141 TKKNGDGTVSLIIYSTDDG----KTWKLSKGM---------SPAGCSDPSVVEW-EDGKLLMMTACD---DGRRRVYESG 203 (310)
T ss_dssp EETT---EEEEEEEESSTT----SS-EE-S-------------TT-EEEEEEEE--TTEEEEEEE-T---TS---EEEES
T ss_pred eccCccceEEEEEEECCCc----cceEecccc---------CCCCcceEEEEec-cCCeeEEEEecc---cceEEEEEEc
Confidence 655445 366788999865 789853221 1246789997755 578888886543 2444699998
Q ss_pred CC-CCcEEccccc
Q 013412 227 DF-IHWTKLDHPL 238 (443)
Q Consensus 227 Dl-~~W~~~g~~l 238 (443)
|+ ..|+..-..|
T Consensus 204 DmG~tWtea~gtl 216 (310)
T PF13859_consen 204 DMGTTWTEALGTL 216 (310)
T ss_dssp STTSS-EE-TTTT
T ss_pred ccceehhhccCcc
Confidence 86 7899754333
No 79
>PF02435 Glyco_hydro_68: Levansucrase/Invertase; InterPro: IPR003469 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This family consists of the glycosyl hydrolase 68 family (GH68 from CAZY), including several bacterial levansucrase enzymes, and invertase from Zymomonas. Levansucrase (2.4.1.10 from EC), also known as beta-D-fructofuranosyl transferase, catalyses the conversion of sucrose and (2,6-beta-D-fructosyl)(N) to glucose and (2,6-beta-D-fructosyl)(N+1), where other sugars can also act as fructosyl acceptors. Invertase, or extracellular sucrase (3.2.1.26 from EC), catalyses the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.; GO: 0050053 levansucrase activity, 0009758 carbohydrate utilization; PDB: 2YFR_A 2YFT_A 2YFS_A 1W18_A 3OM7_B 3OM4_C 3OM6_D 3OM5_A 3OM2_A 1PT2_A ....
Probab=89.33 E-value=11 Score=39.59 Aligned_cols=129 Identities=12% Similarity=0.185 Sum_probs=81.3
Q ss_pred CCEEEEEEEECCCC-CCCC----CCceEEEEEeCC----CcccEeccCCCCCCCccCC-------CCeEeeeEEEc-CCC
Q 013412 77 KGVYHLFYQYNPLG-PLFG----DKMIWAHSVSYD----LINWIHLSHALCPSGPYDI-------NSCWSGSVTIL-PGD 139 (443)
Q Consensus 77 ~G~YHlFyQ~~P~~-~~~g----~~~~Wgha~S~D----lv~W~~~~~aL~P~~~~D~-------~gv~SGsav~~-~dg 139 (443)
+|+..|||.....+ ..-. ....-|++.+.| +-.|+.+.+.+.||+.+-+ ...-.+.++.+ .+|
T Consensus 143 dg~I~LfYTav~~~~~~~~~Q~l~t~~~g~~~~d~~~v~i~g~~~~~~lfe~DG~~Yqt~~Q~~~~afRDP~~f~DP~~G 222 (428)
T PF02435_consen 143 DGSIQLFYTAVGFSDTPTFRQRLATATLGLIHADDDGVWITGFSNHHELFEGDGKHYQTYEQNPGYAFRDPHVFEDPEDG 222 (428)
T ss_dssp TSEEEEEEEEEEEETTTTTEEEEEEEEEEEEEECSTEEEEEEEEEEEEEES--SSSB--HHHHHH---EEEEEEEETTTT
T ss_pred CCeEEEEEeecccCCCcchhhhhhhHhcCeeecCCCceeEccccceeEeeccchhhhhChhhcCCccccCCeeEECCCCC
Confidence 69999999874321 1000 023456777777 5678878788888875432 23457888876 589
Q ss_pred eEEEEEccccCC--------------------------------CceeEEEEEecCCCCCCcceeEEecCCceEeCCCCC
Q 013412 140 KPFILYTGIDAS--------------------------------GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGV 187 (443)
Q Consensus 140 ~~~l~YTg~~~~--------------------------------~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p~~~ 187 (443)
+.||++.|+... ....++||..++.. ...|+-++ |+|....
T Consensus 223 ~~YLvFEgNtg~~~~~~~~g~~d~~~~~~~~~~~~~~~~~~A~~~ng~iGi~~~~~~~---~~~w~~~~--PL~~a~~-- 295 (428)
T PF02435_consen 223 KRYLVFEGNTGGERNWANYGGDDLGNVPGDPKLENNDNKSGASYANGAIGIAKLTNDD---GTVWELLP--PLLSANG-- 295 (428)
T ss_dssp EEEEEEEEEBSTTSBGGGT-SHHHHHHHHHHHHHHSCCHHHHHH-EEEEEEEEESTTT---TSEEEEEE--EEEEETT--
T ss_pred cEEEEEecccCCCCCccccCccccccccccccccccccccccceecceeeeEEecCCC---CCccEEeC--cceeccc--
Confidence 999999886431 01246788887753 25788764 8986532
Q ss_pred CCCCCCCCEEEeecCCCeEEEEEeeee
Q 013412 188 KDDMFRDPTTAWQAPDGRWRVLVGGQI 214 (443)
Q Consensus 188 ~~~~fRDP~Vvw~~~~g~~~Mv~ga~~ 214 (443)
-.....=|.||++ +|+||++..++.
T Consensus 296 v~de~ERP~iv~~--~gkyYLFt~s~~ 320 (428)
T PF02435_consen 296 VNDELERPHIVFM--NGKYYLFTISHL 320 (428)
T ss_dssp TBS-EEEEEEEEE--TTEEEEEEEEEG
T ss_pred ccccccCCcEEEE--CCEEEEEEEecc
Confidence 1234456887765 899999998875
No 80
>COG3507 XynB Beta-xylosidase [Carbohydrate transport and metabolism]
Probab=89.25 E-value=6.8 Score=42.11 Aligned_cols=148 Identities=13% Similarity=0.112 Sum_probs=74.2
Q ss_pred CCCccCCCcceEECCEEEEEEEECCCCC-CCCCCceEEEEEeCC-CcccEeccCCCCCCCccCCCCeEeeeEEEcCCCeE
Q 013412 64 QNWINDPNGPMYYKGVYHLFYQYNPLGP-LFGDKMIWAHSVSYD-LINWIHLSHALCPSGPYDINSCWSGSVTILPGDKP 141 (443)
Q Consensus 64 ~gw~NDPnG~~y~~G~YHlFyQ~~P~~~-~~g~~~~Wgha~S~D-lv~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~ 141 (443)
.|=+--|+ ++|+||+|+|+|---+... .|- +++=-..+.++ .=.|.+. ...+.. +.+..|.+.|+||+.
T Consensus 88 S~giWAPd-l~y~dGkfwl~ytdvk~~~g~~k-~~~nyl~t~~s~~G~WsDp--i~l~~~-----~~iDPslf~D~dGr~ 158 (549)
T COG3507 88 SGGIWAPD-LSYHDGKFWLYYTDVKRSGGPYK-NAGNYLVTAESIDGPWSDP--IKLNGS-----NAIDPSLFFDKDGRK 158 (549)
T ss_pred CCceeccc-eecCCCcEEEEEecccccCCccc-ccccEEEEecCCCCCcccc--eecCCc-----CccCCceeecCCCCE
Confidence 33333465 8899999999995443321 111 22222222222 2245442 111221 257788899999999
Q ss_pred EEEEccccCC--CceeEEEEEecCCCCCCcceeEEecC--CceEeCCCCCCCCCCCCCEEEeecCCCeEEEEEeeee-CC
Q 013412 142 FILYTGIDAS--GQQVQNLAMPENLSDPLLKDWVKFSG--NPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI-DN 216 (443)
Q Consensus 142 ~l~YTg~~~~--~~~~q~lA~s~D~~d~~l~~w~k~~~--nPvi~~p~~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~~-~~ 216 (443)
+|+|-+.+.. ....-.+-.+.... .+ .|..+ -.++-. +.+..--.-|. +++ ++|-|||+++.+. ..
T Consensus 159 wlv~~~w~~~~~~~~~~~i~l~~~~~----~~-~~l~g~~~~~~~~--G~~~~~~EGPh-l~k-~~gYYYL~~a~gG~t~ 229 (549)
T COG3507 159 WLVNGSWDGGIFMHSFAGIILQEYDK----TT-QKLVGQGYKIIFD--GGNGGLTEGPH-LYK-KTGYYYLYVAEGGLTT 229 (549)
T ss_pred EEEecccCCCcccccccceeeeeccc----cc-cccCCccceeEec--cCCCccccCce-eec-cCCEEEEEEEcCCCCc
Confidence 9999987642 00111111121110 11 11111 112211 11112335675 666 7888898886554 33
Q ss_pred cc-eEEEEEeCCCC
Q 013412 217 EG-MAFVYWSWDFI 229 (443)
Q Consensus 217 ~G-~i~lY~S~Dl~ 229 (443)
.| .+.+.||+.+.
T Consensus 230 ~gh~~~vaRSKsid 243 (549)
T COG3507 230 YGHAIRVARSKSID 243 (549)
T ss_pred cceeEEEEeccCCC
Confidence 44 56788998764
No 81
>COG3940 Predicted beta-xylosidase [General function prediction only]
Probab=87.51 E-value=3.3 Score=39.21 Aligned_cols=104 Identities=21% Similarity=0.318 Sum_probs=64.3
Q ss_pred ceEECC-EEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCC-CCCccCCCCeE--eeeEEEcCCCeEEEEEccc
Q 013412 73 PMYYKG-VYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALC-PSGPYDINSCW--SGSVTILPGDKPFILYTGI 148 (443)
Q Consensus 73 ~~y~~G-~YHlFyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~aL~-P~~~~D~~gv~--SGsav~~~dg~~~l~YTg~ 148 (443)
.++++| .|+++-|..|.-. | +.....|.-.+-.+-+-.|+.|. |.-+|+..|.| .|-||+.++|++.+-|+..
T Consensus 137 tfeh~gk~yyvwaqkdp~i~--g-nsniyiaemenpwtikgepvmlskpe~dwe~~gfwvnegpav~k~ngkifi~ysas 213 (324)
T COG3940 137 TFEHNGKLYYVWAQKDPNIK--G-NSNIYIAEMENPWTIKGEPVMLSKPELDWEIKGFWVNEGPAVLKKNGKIFITYSAS 213 (324)
T ss_pred eeeeCCEEEEEEeccCCCcc--C-CcceEEEeccCCceecCceEEecCCCcccEEEEEEecCCceEEEECCEEEEEEecc
Confidence 455666 6888888888643 4 66677776665433333355553 34456666755 6888888899999999875
Q ss_pred cCCCceeEEEEEe---cCCCCCCcceeEEecCCceEe
Q 013412 149 DASGQQVQNLAMP---ENLSDPLLKDWVKFSGNPVMT 182 (443)
Q Consensus 149 ~~~~~~~q~lA~s---~D~~d~~l~~w~k~~~nPvi~ 182 (443)
..+..-..++-+. .|.-|+ .+|+|.+ .||+.
T Consensus 214 atd~nycmgllwanen~dlldp--aswtksp-tpvf~ 247 (324)
T COG3940 214 ATDVNYCMGLLWANENSDLLDP--ASWTKSP-TPVFK 247 (324)
T ss_pred ccccceeeeeeeecccCCcCCc--hhcccCC-Cccee
Confidence 4322222333333 333343 5899974 78884
No 82
>PF13810 DUF4185: Domain of unknown function (DUF4185)
Probab=85.93 E-value=24 Score=35.62 Aligned_cols=156 Identities=14% Similarity=0.153 Sum_probs=87.2
Q ss_pred CccCCCcceEECCEEEEEEEECCC-C---CCCCCCceEEEEEeCC-CcccEeccCCCCCCCccCCCCe------EeeeEE
Q 013412 66 WINDPNGPMYYKGVYHLFYQYNPL-G---PLFGDKMIWAHSVSYD-LINWIHLSHALCPSGPYDINSC------WSGSVT 134 (443)
Q Consensus 66 w~NDPnG~~y~~G~YHlFyQ~~P~-~---~~~g~~~~Wgha~S~D-lv~W~~~~~aL~P~~~~D~~gv------~SGsav 134 (443)
..-=|.+.|-.+|+-+|.|+..-. + ..|. .-.=+.+.|+| .-+|+..+.++.+..+.- .|+ |.=++.
T Consensus 93 ~t~iPt~~I~v~~~~Yl~~msv~~wg~~~G~W~-tn~S~i~~S~D~G~tW~~~~~~~~~~~~~~-~g~~~~~~~fq~~a~ 170 (316)
T PF13810_consen 93 TTVIPTDGISVGGRQYLHYMSVRNWGNVPGSWT-TNYSGIAYSDDNGETWTVVPGTIRPNSPFH-PGFNQGNWNFQMAAF 170 (316)
T ss_pred eEEcccceEEECCcEEEEEEEEccCCCCCCccc-cCceEEEEeCCCCCCceeCCCccccccccc-CCccccccccccccc
Confidence 444588889999999999986521 1 1232 22346888998 789999986666654211 111 222233
Q ss_pred EcCCCeEEEEEccccCCCceeEEEEEe--cCCCCCC------cce--eEEecC--CceEeCCCCCCCCCCCCCEEEeecC
Q 013412 135 ILPGDKPFILYTGIDASGQQVQNLAMP--ENLSDPL------LKD--WVKFSG--NPVMTPPNGVKDDMFRDPTTAWQAP 202 (443)
Q Consensus 135 ~~~dg~~~l~YTg~~~~~~~~q~lA~s--~D~~d~~------l~~--w~k~~~--nPvi~~p~~~~~~~fRDP~Vvw~~~ 202 (443)
...||-+|+|=|...+ .....||.. ++..|+. ... |.+... .||+..+ +---.|.|.+.
T Consensus 171 ~~~dgyVYv~gt~~~R--~g~~~LaRV~~~~i~d~~ayeyw~g~~~~W~~~~~~atpv~~~~-------vgElSv~~~~~ 241 (316)
T PF13810_consen 171 VKDDGYVYVYGTPFGR--NGGVYLARVPPDDILDRSAYEYWDGSGGGWSWGNPPATPVLPGP-------VGELSVRYNEY 241 (316)
T ss_pred cCCCCEEEEEeCCCCC--CCcEEEEEeCHHHCCChhhccccCCCCcccccCCCCccccccCC-------ccceEEEEeCC
Confidence 3356666776665432 222334432 1111110 012 554211 3555332 22335667777
Q ss_pred CCeEEEEEeeeeCCcceEEEEEeCCCC-CcEEc
Q 013412 203 DGRWRVLVGGQIDNEGMAFVYWSWDFI-HWTKL 234 (443)
Q Consensus 203 ~g~~~Mv~ga~~~~~G~i~lY~S~Dl~-~W~~~ 234 (443)
.|+|+|+.... ..+.|.+.++++.. .|...
T Consensus 242 ~gk~Vl~~~~~--~~~~I~~RtA~~P~GpWs~~ 272 (316)
T PF13810_consen 242 LGKWVLSYFDA--GTGGIVLRTAPSPTGPWSEP 272 (316)
T ss_pred CCEEEEEEecc--cCCcEEEEecCCCCCCCCCC
Confidence 89999998643 23567788888876 58643
No 83
>PTZ00334 trans-sialidase; Provisional
Probab=84.82 E-value=8.6 Score=43.32 Aligned_cols=125 Identities=16% Similarity=0.143 Sum_probs=71.4
Q ss_pred CCCCceEEEEEeC-----CCcccEeccCCCCCCC-ccCCC---Ce--EeeeEEEcCCCeEEEEEccccCCCceeEEEEEe
Q 013412 93 FGDKMIWAHSVSY-----DLINWIHLSHALCPSG-PYDIN---SC--WSGSVTILPGDKPFILYTGIDASGQQVQNLAMP 161 (443)
Q Consensus 93 ~g~~~~Wgha~S~-----Dlv~W~~~~~aL~P~~-~~D~~---gv--~SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~s 161 (443)
|+-....|+++-. .-|+|.+. ..|.... ..... +. --||.|+..||++++=-.+...++...-.|.+|
T Consensus 215 ~~l~Lv~G~Vt~~~~~~~k~I~W~~~-~~l~~~~~~~~~~~l~~~iggGGSGI~medGTLVFPv~a~~~~g~~vslIiYS 293 (780)
T PTZ00334 215 WGLLVAVGNVSNDGSSGKKKIYWKDA-SVIPWTDFEKQHESLTRLIGGGGSGVQMKDGTLVFPVEGTKKDGKAVSLIIYS 293 (780)
T ss_pred CccEEEEEEeecCCCCCcceEECcCc-ccCCccccccccccceeecCCCcCeEEecCCeEEEEEEEEcCCCCEEEEEEEe
Confidence 4424567777632 24999873 3331111 10110 11 124556667998776555554445555678889
Q ss_pred cCCCCCCcceeEEecCCceEeCCCCCCCCCCCCCEEEeecCCCeEEEEEeeeeCCcceEEEEEeCCC-CCcEEccc
Q 013412 162 ENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDF-IHWTKLDH 236 (443)
Q Consensus 162 ~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~~~g~~~Mv~ga~~~~~G~i~lY~S~Dl-~~W~~~g~ 236 (443)
+|.+ +|+=.+ +....+.+||.|+-. ++|+-.|+.... .|+=.+|+|.|. ..|+..-.
T Consensus 294 ~d~g-----~W~ls~---------g~s~~gC~~P~I~EW-e~gkLlM~t~C~---dG~RrVYES~DmG~tWtEAlG 351 (780)
T PTZ00334 294 SATE-----SGNLSK---------GMSADGCSDPSVVEW-KEGKLMMMTACD---DGRRRVYESGDKGDSWTEALG 351 (780)
T ss_pred cCCC-----CeEEcC---------CCCCCCCCCCEEEEE-cCCeEEEEEEeC---CCCEEEEEECCCCCChhhCCC
Confidence 8863 485321 112246799997744 467877776553 233369999886 78986543
No 84
>COG1621 SacC Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism]
Probab=84.30 E-value=13 Score=39.67 Aligned_cols=98 Identities=14% Similarity=0.148 Sum_probs=58.8
Q ss_pred EcCCCeEEEEEccccC---CCceeEEEEEecCCCCCCcceeEEecCCceEeCCCCCCCCCCCCCEEEeecCCCeEEEEEe
Q 013412 135 ILPGDKPFILYTGIDA---SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVG 211 (443)
Q Consensus 135 ~~~dg~~~l~YTg~~~---~~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~Vvw~~~~g~~~Mv~g 211 (443)
+..+|++++||-=+-. .+...=+.|+|+|. ++|+..+ +++.|...++.....--.+|-. .++.+.|+-|
T Consensus 48 iy~~G~yHlFYQ~~P~~~~~g~~~WgHa~S~Dl-----v~W~~~p--iaL~Pd~~~d~~g~ySGSAV~~-~~~l~lfytg 119 (486)
T COG1621 48 IYFDGKYHLFYQYNPFGAAHGPKHWGHAVSKDL-----VHWEHLP--IALAPDDDYDSHGCYSGSAVVD-DGNLSLFYTG 119 (486)
T ss_pred eEECCEEEEEEecCCCCCCCCCceeeeeccCCc-----ccceECC--ceecCCCccccCCceeeeEEEe-CCcEEEEEcc
Confidence 3458999999975421 13344468999886 8999752 4555544444444444443433 4667777777
Q ss_pred eeeC---Ccc-eEEEEEeCCCCCcEE-ccccccc
Q 013412 212 GQID---NEG-MAFVYWSWDFIHWTK-LDHPLYS 240 (443)
Q Consensus 212 a~~~---~~G-~i~lY~S~Dl~~W~~-~g~~l~~ 240 (443)
...+ .+. .=.+..|+|..++++ .+.++..
T Consensus 120 ~v~~~~~~r~~~Q~iA~s~dg~~f~K~~~~~i~~ 153 (486)
T COG1621 120 NVRDSNGIRQQTQCIAYSEDGGTFEKYSGNPIID 153 (486)
T ss_pred ceeccCCcceeEEEEEEEcCCCceEeccCCceec
Confidence 6542 122 234667888888877 3555543
No 85
>PF13810 DUF4185: Domain of unknown function (DUF4185)
Probab=74.51 E-value=15 Score=37.02 Aligned_cols=91 Identities=12% Similarity=0.218 Sum_probs=53.1
Q ss_pred cCCCeEEEEEccccCCC-------ceeEEEEEecCCCCCCcceeEEecCCceEeCCCCCCCCCCC---CCEE--EeecCC
Q 013412 136 LPGDKPFILYTGIDASG-------QQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFR---DPTT--AWQAPD 203 (443)
Q Consensus 136 ~~dg~~~l~YTg~~~~~-------~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fR---DP~V--vw~~~~ 203 (443)
..+|+.||.|..+..-+ .....||.|+|.+ .+|++.+ ..+-.+.+. ...+. .++. -+. .+
T Consensus 102 ~v~~~~Yl~~msv~~wg~~~G~W~tn~S~i~~S~D~G----~tW~~~~-~~~~~~~~~--~~g~~~~~~~fq~~a~~-~~ 173 (316)
T PF13810_consen 102 SVGGRQYLHYMSVRNWGNVPGSWTTNYSGIAYSDDNG----ETWTVVP-GTIRPNSPF--HPGFNQGNWNFQMAAFV-KD 173 (316)
T ss_pred EECCcEEEEEEEEccCCCCCCccccCceEEEEeCCCC----CCceeCC-Ccccccccc--cCCcccccccccccccc-CC
Confidence 35889999999874311 1246799999986 7999864 222222110 01111 1221 122 34
Q ss_pred CeEEEEEeeeeCCcceEEEEEe-----CCCCCcEEc
Q 013412 204 GRWRVLVGGQIDNEGMAFVYWS-----WDFIHWTKL 234 (443)
Q Consensus 204 g~~~Mv~ga~~~~~G~i~lY~S-----~Dl~~W~~~ 234 (443)
+.|+-++|......|.+.|+|- .|+..|+|-
T Consensus 174 dgyVYv~gt~~~R~g~~~LaRV~~~~i~d~~ayeyw 209 (316)
T PF13810_consen 174 DGYVYVYGTPFGRNGGVYLARVPPDDILDRSAYEYW 209 (316)
T ss_pred CCEEEEEeCCCCCCCcEEEEEeCHHHCCChhhcccc
Confidence 5687788876555667788875 355567664
No 86
>PF03664 Glyco_hydro_62: Glycosyl hydrolase family 62 ; InterPro: IPR005193 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha -L-arabinofuranosidases (3.2.1.55 from EC) which are all members of glycoside hydrolase family 62 (GH62 from CAZY). This enzyme hydrolyzed aryl alpha-L-arabinofuranosides and cleaves arabinosyl side chains from arabinoxylan and arabinan.; GO: 0046556 alpha-N-arabinofuranosidase activity, 0046373 L-arabinose metabolic process
Probab=73.19 E-value=95 Score=30.26 Aligned_cols=70 Identities=21% Similarity=0.369 Sum_probs=40.5
Q ss_pred CCCcceEE--CCEEEEEEEECCCCCCCCCCceEEEEEeCCCcc---cEeccCCCCCCCc-cCCCCeEeeeEEEcCCCeEE
Q 013412 69 DPNGPMYY--KGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLIN---WIHLSHALCPSGP-YDINSCWSGSVTILPGDKPF 142 (443)
Q Consensus 69 DPnG~~y~--~G~YHlFyQ~~P~~~~~g~~~~Wgha~S~Dlv~---W~~~~~aL~P~~~-~D~~gv~SGsav~~~dg~~~ 142 (443)
-|. ++|+ +..|.|.||+.+ ......||+|.-+ |....+ |..+.. ....|...--+|- ++-..|
T Consensus 78 AP~-vFYFaPk~~W~L~yQwg~--------~~fsY~Ts~DptnpngWSapq~-lf~g~i~~~~~g~iD~~vI~-D~~n~y 146 (271)
T PF03664_consen 78 APQ-VFYFAPKNIWYLAYQWGP--------AAFSYSTSSDPTNPNGWSAPQP-LFSGSISGSGTGPIDQWVIC-DDTNMY 146 (271)
T ss_pred cce-EEEecCCcEEEEEEecCC--------CcceeecCCCCCCCccCCCCcc-cccccccCCCCCceeeEEEe-cCCceE
Confidence 355 6776 789999999754 3356678888653 664332 333321 1122333444333 355689
Q ss_pred EEEcccc
Q 013412 143 ILYTGID 149 (443)
Q Consensus 143 l~YTg~~ 149 (443)
||+++-+
T Consensus 147 LFfa~Dn 153 (271)
T PF03664_consen 147 LFFAGDN 153 (271)
T ss_pred EEEcCCC
Confidence 9998743
No 87
>KOG0228 consensus Beta-fructofuranosidase (invertase) [Carbohydrate transport and metabolism]
Probab=64.16 E-value=44 Score=35.83 Aligned_cols=90 Identities=20% Similarity=0.307 Sum_probs=53.8
Q ss_pred CCCeEEEEEccccCC---CceeEEEEEecCCCCCCcceeEEecCCceEeCCCCCC-CCCCCCCEEEeecCCCeEEEEEee
Q 013412 137 PGDKPFILYTGIDAS---GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVK-DDMFRDPTTAWQAPDGRWRVLVGG 212 (443)
Q Consensus 137 ~dg~~~l~YTg~~~~---~~~~q~lA~s~D~~d~~l~~w~k~~~nPvi~~p~~~~-~~~fRDP~Vvw~~~~g~~~Mv~ga 212 (443)
.+|.++|||.-+-.. +...=++|+|+|. ++|+.++ |-|.|....+ ...|---.|+ . .+|.=.|+..+
T Consensus 68 ykG~yHLFyQyNP~gavwg~ivWGHavSkDL-----inW~~lp--~Ai~Ps~~~ding~wSGSati-~-~~~~~vilytg 138 (571)
T KOG0228|consen 68 YKGKYHLFYQYNPKGAVWGNIVWGHAVSKDL-----INWEALP--PAIAPSEWFDINGCWSGSATI-D-PNNSPVILYTG 138 (571)
T ss_pred cCcEEEEEEecCCCCceeeeeEeeeecchhh-----ccccccC--cccCCCCccccCccccceEEE-c-cCCCeEEEecc
Confidence 589999999855332 3355579999996 8999864 5564433111 1233333333 2 46777777765
Q ss_pred eeCCcceEEEEEe-C-----CCCCcEEcc
Q 013412 213 QIDNEGMAFVYWS-W-----DFIHWTKLD 235 (443)
Q Consensus 213 ~~~~~G~i~lY~S-~-----Dl~~W~~~g 235 (443)
......++.+|.- . -|+.|...+
T Consensus 139 ~d~~~rqVqn~a~p~d~sdp~l~~w~k~~ 167 (571)
T KOG0228|consen 139 IDPNNRQVQNYAYPKDVSDPQLIAWSKDG 167 (571)
T ss_pred cCcCceEEEEEeccCCCCchhhheeecCC
Confidence 5444456777752 2 256776654
No 88
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=37.69 E-value=25 Score=29.05 Aligned_cols=13 Identities=31% Similarity=0.363 Sum_probs=7.6
Q ss_pred cCchhHHHHHHHH
Q 013412 9 MTSPALMVLLCCF 21 (443)
Q Consensus 9 ~~~~~~~~~~~~~ 21 (443)
|+|-++++|.++|
T Consensus 1 MaSK~~llL~l~L 13 (95)
T PF07172_consen 1 MASKAFLLLGLLL 13 (95)
T ss_pred CchhHHHHHHHHH
Confidence 6666666655443
No 89
>PTZ00449 104 kDa microneme/rhoptry antigen; Provisional
Probab=36.00 E-value=1.2e+02 Score=32.77 Aligned_cols=54 Identities=20% Similarity=0.317 Sum_probs=37.5
Q ss_pred ECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCccCCCCeEeeeEEEcCCCeEEEEEccc
Q 013412 76 YKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGI 148 (443)
Q Consensus 76 ~~G~YHlFyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~ 148 (443)
--|+=+|-.|+.|.. .....+--|.|-|+..... .|++.+|. .++.+||.|--.
T Consensus 56 magvkylq~q~~~~v-------~ihk~veg~iviwen~~~p-----------lyt~aivt-~n~~pymayve~ 109 (943)
T PTZ00449 56 MAGVKYLQLQHGPGV-------NIHKLVEGDIVIWENAEMP-----------LYTCAIVT-NNDGPYMAYVEL 109 (943)
T ss_pred hccceeEEeecCCCc-------ceeEeeeccEEEEecCCCc-----------ceeEEEEe-cCCCCeeeeeee
Confidence 357778888988844 3445788899999976433 47776654 466677777643
No 90
>PF02012 BNR: BNR/Asp-box repeat; InterPro: IPR002860 Members of this entry contain multiple BNR (bacterial neuraminidase repeat) repeats or Asp-boxes. The repeats are short, however the repeats are never found closer than 40 residues together suggesting that the repeat is structurally longer. These repeats are found in a variety of non-homologous proteins, including bacterial ribonucleases, sulphite oxidases, reelin, netrins, sialidases, neuraminidases, some lipoprotein receptors, and a variety of glycosyl hydrolases [].; PDB: 2JKB_A 2VW0_A 2VW2_A 2VW1_A 2CN2_D 2CN3_B 2VK7_B 2VK5_A 2VK6_A 2BF6_A ....
Probab=30.60 E-value=41 Score=17.16 Aligned_cols=11 Identities=27% Similarity=0.522 Sum_probs=7.1
Q ss_pred EecCCCCCCcceeEE
Q 013412 160 MPENLSDPLLKDWVK 174 (443)
Q Consensus 160 ~s~D~~d~~l~~w~k 174 (443)
+|+|+| .+|++
T Consensus 2 ~S~D~G----~TW~~ 12 (12)
T PF02012_consen 2 YSTDGG----KTWKK 12 (12)
T ss_dssp EESSTT----SS-EE
T ss_pred EeCCCc----ccCcC
Confidence 577876 78874
No 91
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=22.40 E-value=5.6e+02 Score=25.57 Aligned_cols=48 Identities=21% Similarity=0.251 Sum_probs=28.4
Q ss_pred cCCCCCCCccCCCCeEeeeEEEcCC--CeE--EEEEccccCCCceeEEEEEecCC
Q 013412 114 SHALCPSGPYDINSCWSGSVTILPG--DKP--FILYTGIDASGQQVQNLAMPENL 164 (443)
Q Consensus 114 ~~aL~P~~~~D~~gv~SGsav~~~d--g~~--~l~YTg~~~~~~~~q~lA~s~D~ 164 (443)
.+|-.|.+.+=..|-|.+++++-.+ +.. +..--|+ ..+.-++|+|.++
T Consensus 66 svAwsp~g~~La~aSFD~t~~Iw~k~~~efecv~~lEGH---EnEVK~Vaws~sG 117 (312)
T KOG0645|consen 66 SVAWSPHGRYLASASFDATVVIWKKEDGEFECVATLEGH---ENEVKCVAWSASG 117 (312)
T ss_pred eeeecCCCcEEEEeeccceEEEeecCCCceeEEeeeecc---ccceeEEEEcCCC
Confidence 4667777766555667777766433 333 2233333 3456788888775
No 92
>smart00602 VPS10 VPS10 domain.
Probab=21.02 E-value=9.1e+02 Score=26.64 Aligned_cols=30 Identities=20% Similarity=0.152 Sum_probs=21.1
Q ss_pred CCCCCccccccccEEEEEecCCCEEEecch
Q 013412 349 DIDKGWSGVQTVPRAIWLDKSGKQLVQWPV 378 (443)
Q Consensus 349 ~~~~gW~g~lslPR~l~l~~dG~~L~q~Pv 378 (443)
+...-|.-++--|....+-..|..|+.-|.
T Consensus 382 DgG~tW~~~~~~~~~~~~gD~G~iivav~~ 411 (612)
T smart00602 382 DGGLTWRLVFDGPHLYAYGDHGGIIVAIEY 411 (612)
T ss_pred CCCcchHhhcCCceeEEecCCccEEEEEcC
Confidence 445678888888888888766765555543
Done!