Query 013420
Match_columns 443
No_of_seqs 114 out of 816
Neff 2.6
Searched_HMMs 29240
Date Mon Mar 25 10:14:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013420.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013420hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1hbk_A ACBP, acyl-COA binding 100.0 2.7E-31 9.1E-36 216.2 11.3 88 315-405 2-89 (89)
2 2cop_A Acyl-coenzyme A binding 100.0 3.8E-31 1.3E-35 223.3 11.7 94 311-409 4-97 (109)
3 1st7_A ACBP, acyl-COA-binding 100.0 2.4E-31 8.4E-36 215.2 7.7 85 315-404 1-85 (86)
4 2cqu_A Peroxisomal D3,D2-enoyl 100.0 2.5E-30 8.6E-35 221.1 12.1 93 312-409 13-105 (116)
5 3epy_A Acyl-COA-binding domain 100.0 1.7E-30 5.8E-35 212.5 9.3 86 314-404 3-88 (89)
6 2wh5_A Acyl-COA-binding domain 100.0 1.2E-30 4.1E-35 219.8 8.5 101 311-412 4-104 (106)
7 3flv_A Acyl-COA-binding domain 100.0 1.9E-30 6.6E-35 223.3 8.2 105 299-404 8-112 (119)
8 2cb8_A Acyl-COA-binding protei 100.0 7.4E-30 2.5E-34 207.5 9.1 84 316-404 3-86 (87)
9 3fp5_A Acyl-COA binding protei 100.0 1.6E-29 5.6E-34 213.1 9.3 87 315-402 4-90 (106)
10 2lbb_A Acyl COA binding protei 100.0 1.8E-29 6.2E-34 209.9 8.1 85 317-405 12-96 (96)
11 1mix_A Talin; focal adhesion, 98.2 4.9E-06 1.7E-10 72.2 9.7 84 315-404 18-115 (206)
12 1ef1_A Moesin; membrane, FERM 95.8 0.029 9.8E-07 51.3 8.5 84 316-405 97-200 (294)
13 4f7g_A Talin-1; alpha-helix bu 95.5 0.023 7.8E-07 50.6 6.4 83 315-403 29-125 (222)
14 1h4r_A Merlin; FERM, neurofibr 95.2 0.038 1.3E-06 51.3 7.2 81 318-404 119-219 (314)
15 3qij_A Protein 4.1; cytoskelet 95.1 0.054 1.9E-06 50.6 7.8 80 319-404 114-205 (296)
16 3ivf_A Talin-1; FERM domain, c 94.3 0.19 6.6E-06 47.8 9.6 83 316-404 184-280 (371)
17 2i1j_A Moesin; FERM, coiled-co 92.8 0.19 6.4E-06 52.0 7.1 83 317-405 101-203 (575)
18 3au4_A Myosin-X; protein-prote 91.0 0.7 2.4E-05 46.4 8.8 85 315-405 321-452 (555)
19 4dxa_B KREV interaction trappe 88.3 0.76 2.6E-05 43.1 6.2 81 317-403 116-221 (322)
20 2al6_A Focal adhesion kinase 1 87.2 0.74 2.5E-05 44.4 5.6 83 315-403 114-223 (375)
21 4eku_A Protein-tyrosine kinase 76.3 3.5 0.00012 40.7 5.8 85 315-405 134-245 (392)
22 3pvl_A Myosin VIIA isoform 1; 75.3 6.8 0.00023 41.2 7.9 83 317-404 372-476 (655)
23 2j0j_A Focal adhesion kinase 1 36.4 34 0.0012 34.9 4.8 63 337-399 132-220 (656)
No 1
>1hbk_A ACBP, acyl-COA binding protein; fatty acid metabolism; HET: COA MYR; 2.0A {Plasmodium falciparum} SCOP: a.11.1.1
Probab=99.97 E-value=2.7e-31 Score=216.16 Aligned_cols=88 Identities=28% Similarity=0.520 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCChHHHHHHHHhhhccccCCCCCCCCCCcchhhHHHHHHHHHcCCCCHHHHHHHHHH
Q 013420 315 LERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVT 394 (443)
Q Consensus 315 LEEaFeAAVefVrsLpk~G~VsqLSnDdKLeLYALYKQATeGDCn~PKPG~fD~vGRAKWnAWKkLKGMSKEEAMrKYIE 394 (443)
|+++|.+|+.+|+.++.. .+|+++++|+|||||||||+|||++++||+||+++|+||+||++++|||+++||++||+
T Consensus 2 l~~~F~~A~~~v~~l~~~---~~~~~~~~L~LYalyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~gms~eeA~~~YI~ 78 (89)
T 1hbk_A 2 MAQVFEECVSFINGLPRT---INLPNELKLDLYKYYKQSTIGNCNIKEPSAHKYIDRKKYEAWKSVENLNREDAQKRYVD 78 (89)
T ss_dssp HHHHHHHHHHHHHHSCTT---CCCCHHHHHHHHHHHHHHHTCSCCSCCCCTTSHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCCc---CCCCHHHHHHHHHHHHHhhcCCCCCCCCCccCHHhHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 678999999999999742 47899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhCcCccc
Q 013420 395 ILSRSIPGCIQ 405 (443)
Q Consensus 395 LVeKLlPgW~e 405 (443)
+|++++|.|.+
T Consensus 79 ~v~~l~~~~~~ 89 (89)
T 1hbk_A 79 IVSEIFPYWQD 89 (89)
T ss_dssp HHHHHCTTTTC
T ss_pred HHHHHcccccC
Confidence 99999999963
No 2
>2cop_A Acyl-coenzyme A binding domain containing 6; acyl COA binding protein, COA binding protein, lipid binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.97 E-value=3.8e-31 Score=223.32 Aligned_cols=94 Identities=27% Similarity=0.516 Sum_probs=88.3
Q ss_pred ccchHHHHHHHHHHHHhccCCCCCCCCCChHHHHHHHHhhhccccCCCCCCCCCCcchhhHHHHHHHHHcCCCCHHHHHH
Q 013420 311 ERTELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAME 390 (443)
Q Consensus 311 essELEEaFeAAVefVrsLpk~G~VsqLSnDdKLeLYALYKQATeGDCn~PKPG~fD~vGRAKWnAWKkLKGMSKEEAMr 390 (443)
++++|+++|.+|+.+|+.++ .+++++++|+|||||||||+|||++++|++||+++|+||+||++|+|||+++||+
T Consensus 4 ~~~~l~~~F~~A~~~vk~l~-----~~p~~~~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~~raKw~AW~~l~gms~eeAm~ 78 (109)
T 2cop_A 4 GSSGLAELFEKAAAHLQGLI-----QVASREQLLYLYARYKQVKVGNCNTPKPSFFDFEGKQKWEAWKALGDSSPSQAMQ 78 (109)
T ss_dssp CCCCSHHHHHHHHHHHTTST-----TTSCHHHHHHHHHHHHHHHTCSCCSCCCCSSCHHHHHHHHHHHSCTTCCHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHcc-----cCCCHHHHHHHHHHHHHhhcCCCCCCCCCccCHHHHHHHHHHHHhcCCCHHHHHH
Confidence 45678899999999999986 3689999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCcCcccCCCC
Q 013420 391 QYVTILSRSIPGCIQDGIG 409 (443)
Q Consensus 391 KYIELVeKLlPgW~e~~~~ 409 (443)
+||++|++++|.|....+.
T Consensus 79 ~YI~lv~~l~~~~~~~~~~ 97 (109)
T 2cop_A 79 EYIAVVKKLDPGWNPQIPE 97 (109)
T ss_dssp HHHHHHHHHCTTCCCCCCC
T ss_pred HHHHHHHHHhhhhcccchh
Confidence 9999999999999988653
No 3
>1st7_A ACBP, acyl-COA-binding protein; four helix bundle, transport protein; NMR {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.4e-31 Score=215.21 Aligned_cols=85 Identities=26% Similarity=0.447 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCChHHHHHHHHhhhccccCCCCCCCCCCcchhhHHHHHHHHHcCCCCHHHHHHHHHH
Q 013420 315 LERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVT 394 (443)
Q Consensus 315 LEEaFeAAVefVrsLpk~G~VsqLSnDdKLeLYALYKQATeGDCn~PKPG~fD~vGRAKWnAWKkLKGMSKEEAMrKYIE 394 (443)
|++.|.+|+.+|+.++ .+|+++++|+|||||||||+|||++++|++||+++|+||+||++++|||+++||++||+
T Consensus 1 l~~~F~~A~~~v~~l~-----~~~~~~~~L~lYalyKQAt~Gd~~~~~Pg~~d~~~raKw~AW~~l~gms~eeA~~~YI~ 75 (86)
T 1st7_A 1 VSQLFEEKAKAVNELP-----TKPSTDELLELYALYKQATVGDNDKEKPGIFNMKDRYKWEAWENLKGKSQEDAEKEYIA 75 (86)
T ss_dssp CHHHHHHHHHHHTSCS-----SCCCHHHHHHHHHHHHHHHHCSCCCCCCCSSCHHHHHHHHHHHTTTTTHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcc-----CCcCHHHHHHHHHHHHHHhhCCCCCCCCCccCHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 4689999999999997 36899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhCcCcc
Q 013420 395 ILSRSIPGCI 404 (443)
Q Consensus 395 LVeKLlPgW~ 404 (443)
+|++++|.|.
T Consensus 76 ~v~~l~~~~~ 85 (86)
T 1st7_A 76 LVDQLIAKYS 85 (86)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHhhhhc
Confidence 9999999995
No 4
>2cqu_A Peroxisomal D3,D2-enoyl-COA isomerase; acyl-COA binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.97 E-value=2.5e-30 Score=221.12 Aligned_cols=93 Identities=30% Similarity=0.525 Sum_probs=87.2
Q ss_pred cchHHHHHHHHHHHHhccCCCCCCCCCChHHHHHHHHhhhccccCCCCCCCCCCcchhhHHHHHHHHHcCCCCHHHHHHH
Q 013420 312 RTELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQ 391 (443)
Q Consensus 312 ssELEEaFeAAVefVrsLpk~G~VsqLSnDdKLeLYALYKQATeGDCn~PKPG~fD~vGRAKWnAWKkLKGMSKEEAMrK 391 (443)
+.+|+++|..|+.+|+.++ .+|+++++|+|||||||||+|||+.++|++||+++|+||+||++|+|||+++||++
T Consensus 13 m~~~~~~F~~A~~~vk~l~-----~~p~~~~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~graKw~AW~~l~gms~eeAm~~ 87 (116)
T 2cqu_A 13 MRASQKDFENSMNQVKLLK-----KDPGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDAWNALGSLPKEAARQN 87 (116)
T ss_dssp CCCCHHHHHHHHHHHHHCC-----SCCCHHHHHHHHHHHTTTTTCSCCSCCCCTTCHHHHHHHHHHHHHCSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcc-----CCCCHHHHHHHHHHHHHHhcCCCCCCCCCcccHHHHHHHHHHHHhcCCCHHHHHHH
Confidence 4457999999999999997 36899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCcCcccCCCC
Q 013420 392 YVTILSRSIPGCIQDGIG 409 (443)
Q Consensus 392 YIELVeKLlPgW~e~~~~ 409 (443)
||++|++++|.|.+....
T Consensus 88 YI~lv~~l~~~~~~~~~~ 105 (116)
T 2cqu_A 88 YVDLVSSLSPSLESSSQV 105 (116)
T ss_dssp HHHHHHHHCSCCCCCCCC
T ss_pred HHHHHHHHcccccccccc
Confidence 999999999999987543
No 5
>3epy_A Acyl-COA-binding domain-containing protein 7; acyl-COA binding protein, fatty acid, lipid metabolism, structural genomics; HET: COA PLM; 2.00A {Homo sapiens} SCOP: a.11.1.1
Probab=99.96 E-value=1.7e-30 Score=212.49 Aligned_cols=86 Identities=26% Similarity=0.317 Sum_probs=82.1
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCChHHHHHHHHhhhccccCCCCCCCCCCcchhhHHHHHHHHHcCCCCHHHHHHHHH
Q 013420 314 ELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYV 393 (443)
Q Consensus 314 ELEEaFeAAVefVrsLpk~G~VsqLSnDdKLeLYALYKQATeGDCn~PKPG~fD~vGRAKWnAWKkLKGMSKEEAMrKYI 393 (443)
+|+++|.+|+.+|+.++ .+|+++++|+|||||||||+|||+.++|++||+++|+||+||++++|||+++||++||
T Consensus 3 ~L~~~F~~A~~~vk~l~-----~~p~~~~~L~lYalyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~g~s~eeA~~~Yi 77 (89)
T 3epy_A 3 ALQADFDRAAEDVRKLK-----ARPDDGELKELYGLYKQAIVGDINIACPGMLDLKGKAKWEAWNLKKGLSTEDATSAYI 77 (89)
T ss_dssp HHHHHHHHHHHHGGGCS-----SCCCHHHHHHHHHHHHHHHTCSCCSCCTTTTCHHHHHHHHHHHTTTTCCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHcC-----CCcCHHHHHHHHHHHHHHhhCCCCCCCCcccchHHHHHHHHHHHhhCCCHHHHHHHHH
Confidence 48999999999999996 3689999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhCcCcc
Q 013420 394 TILSRSIPGCI 404 (443)
Q Consensus 394 ELVeKLlPgW~ 404 (443)
+++++++|.|.
T Consensus 78 ~~v~~l~~ky~ 88 (89)
T 3epy_A 78 SKAKELIEKYG 88 (89)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHhhhhc
Confidence 99999999873
No 6
>2wh5_A Acyl-COA-binding domain-containing protein 4; alternative splicing, fatty acid metabolism, lipid transport, lipid binding protein; HET: STE ST9 COA; 2.60A {Homo sapiens}
Probab=99.96 E-value=1.2e-30 Score=219.79 Aligned_cols=101 Identities=29% Similarity=0.487 Sum_probs=86.1
Q ss_pred ccchHHHHHHHHHHHHhccCCCCCCCCCChHHHHHHHHhhhccccCCCCCCCCCCcchhhHHHHHHHHHcCCCCHHHHHH
Q 013420 311 ERTELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAME 390 (443)
Q Consensus 311 essELEEaFeAAVefVrsLpk~G~VsqLSnDdKLeLYALYKQATeGDCn~PKPG~fD~vGRAKWnAWKkLKGMSKEEAMr 390 (443)
+.++|+++|.+|+.+|+.++..|+. +|+++++|+|||||||||+|||+.++|++||+++|+||+||++++|||+++||+
T Consensus 4 ~~~~l~~~F~~A~~~vk~l~~~g~~-~ps~e~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~gms~eeA~~ 82 (106)
T 2wh5_A 4 PEPDCQKQFQAAVSVIQNLPKNGSY-RPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDAWNSLGKMSREEAMS 82 (106)
T ss_dssp -----CHHHHHHHHHHHHSCSSCSC-CCCHHHHHHHHHHHHHHHHCSCCSCCCCTTCHHHHHHHHHHHTTTTCCHHHHHH
T ss_pred cchHHHHHHHHHHHHHHhccccCCC-CCCHHHHHHHHHHHhhhccCCCCCCCCCcccHHHHHHHHHHHHhcCCCHHHHHH
Confidence 4456889999999999999876653 799999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCcCcccCCCCCCC
Q 013420 391 QYVTILSRSIPGCIQDGIGGDI 412 (443)
Q Consensus 391 KYIELVeKLlPgW~e~~~~~~~ 412 (443)
+||+++++++|.+.+.-|...+
T Consensus 83 ~YI~~v~~l~~k~~~t~~~~~~ 104 (106)
T 2wh5_A 83 AYITEMKLVAQKVIDTVPLGEV 104 (106)
T ss_dssp HHHHHHHHHHHHHHTC------
T ss_pred HHHHHHHHHHHHhhccCCchhc
Confidence 9999999999999887766544
No 7
>3flv_A Acyl-COA-binding domain-containing protein 5; lipid binding, structural genomics, struct genomics consortium, SGC, lipid-binding, membrane; HET: STE COA; 1.70A {Homo sapiens}
Probab=99.96 E-value=1.9e-30 Score=223.32 Aligned_cols=105 Identities=28% Similarity=0.369 Sum_probs=86.4
Q ss_pred cccCCCCCccccccchHHHHHHHHHHHHhccCCCCCCCCCChHHHHHHHHhhhccccCCCCCCCCCCcchhhHHHHHHHH
Q 013420 299 VSFDEDDDWEGIERTELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWK 378 (443)
Q Consensus 299 ~s~edtdDwEg~essELEEaFeAAVefVrsLpk~G~VsqLSnDdKLeLYALYKQATeGDCn~PKPG~fD~vGRAKWnAWK 378 (443)
++..|.+...-..+++|+++|.+|+.+|+.++..|++ +|+++++|+|||||||||+|||+.++|++||+++|+||+||+
T Consensus 8 ~~~~~~~~~~~~~~~dLe~~F~~A~~~Vk~l~~~g~~-~ps~d~~L~LYaLyKQAT~Gd~~~~~Pg~~d~~graKw~AW~ 86 (119)
T 3flv_A 8 SSGVDLGTENLYFQSMHETRFEAAVKVIQSLPKNGSF-QPTNEMMLKFYSFYKQATEGPCKLSRPGFWDPIGRYKWDAWS 86 (119)
T ss_dssp --------------CHHHHHHHHHHHHHHHHHHHSSC-CCCHHHHHHHHHHHHHHHTCSCCSCCCCTTCHHHHHHHHHHH
T ss_pred cccccccchhhhhhhHHHHHHHHHHHHHHhCcccCCC-CCCHHHHHHHHHHHHHHhcCCCCCCCCCccCHHHHHHHHHHH
Confidence 3444555555567889999999999999999876653 789999999999999999999999999999999999999999
Q ss_pred HcCCCCHHHHHHHHHHHHHhhCcCcc
Q 013420 379 QLGNMTPEIAMEQYVTILSRSIPGCI 404 (443)
Q Consensus 379 kLKGMSKEEAMrKYIELVeKLlPgW~ 404 (443)
+++|||+++||++||++++++++...
T Consensus 87 ~l~gmS~eeAm~~YI~~v~~l~~~~~ 112 (119)
T 3flv_A 87 SLGDMTKEEAMIAYVEEMKKIIETMP 112 (119)
T ss_dssp HTTTCCHHHHHHHHHHHHHHHHHHSC
T ss_pred HccCCCHHHHHHHHHHHHHHHHhhCC
Confidence 99999999999999999999988764
No 8
>2cb8_A Acyl-COA-binding protein; acyl-coenzyme A binding protein, fatty acid, acetylation, alternative splicing, lipid-binding, transport; HET: MYA; 1.4A {Homo sapiens} PDB: 2fj9_A 1aca_A* 1hb6_A 1hb8_A 1nti_A 1nvl_A* 2abd_A 2fdq_A
Probab=99.96 E-value=7.4e-30 Score=207.48 Aligned_cols=84 Identities=25% Similarity=0.370 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCChHHHHHHHHhhhccccCCCCCCCCCCcchhhHHHHHHHHHcCCCCHHHHHHHHHHH
Q 013420 316 ERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVTI 395 (443)
Q Consensus 316 EEaFeAAVefVrsLpk~G~VsqLSnDdKLeLYALYKQATeGDCn~PKPG~fD~vGRAKWnAWKkLKGMSKEEAMrKYIEL 395 (443)
+++|.+|+.+|+.++ .+|+++++|+|||||||||+|||+.++|++||+++|+||+||++++|||+++||++||++
T Consensus 3 ~~~F~~A~~~vk~l~-----~~~~~~~~L~lYalyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~gms~eeA~~~Yi~~ 77 (87)
T 2cb8_A 3 QAEFEKAAEEVRHLK-----TKPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINK 77 (87)
T ss_dssp HHHHHHHHHHGGGCS-----SCCCHHHHHHHHHHHHHHHTCSCCSCCCCTTCHHHHHHHHHHHTTTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcc-----CCcCHHHHHHHHHHHHhhhhCCCCCCCCCcccHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 579999999999997 368999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhCcCcc
Q 013420 396 LSRSIPGCI 404 (443)
Q Consensus 396 VeKLlPgW~ 404 (443)
+++++|.|.
T Consensus 78 v~~l~~~~~ 86 (87)
T 2cb8_A 78 VEELKKKYG 86 (87)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhC
Confidence 999999884
No 9
>3fp5_A Acyl-COA binding protein; ACBP, cacao disease, fatty acid metabolism, lipid binding protein; HET: MES; 1.61A {Moniliophthora perniciosa} SCOP: a.11.1.0
Probab=99.96 E-value=1.6e-29 Score=213.12 Aligned_cols=87 Identities=28% Similarity=0.456 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCChHHHHHHHHhhhccccCCCCCCCCCCcchhhHHHHHHHHHcCCCCHHHHHHHHHH
Q 013420 315 LERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVT 394 (443)
Q Consensus 315 LEEaFeAAVefVrsLpk~G~VsqLSnDdKLeLYALYKQATeGDCn~PKPG~fD~vGRAKWnAWKkLKGMSKEEAMrKYIE 394 (443)
++++|.+|+.+|+.+++.|+. +|+++++|+|||||||||+|||+.++|++||+++|+||+||++++|||+++||++||+
T Consensus 4 ~~~~F~~A~~~vk~l~~~g~~-~ps~~~~L~LYalyKQAt~Gd~~~~~Pg~~d~~~raKw~AW~~l~gmS~eeA~~~YI~ 82 (106)
T 3fp5_A 4 SKAKFDKAVEIVQSLPKDGPI-KPTQDEQLYFYKYFKQATVGDVNISRPGLMDFTGKAKWDAWKSVEGTSKEVAYQKYVE 82 (106)
T ss_dssp CHHHHHHHHHHHHHCCSSSSS-CCCHHHHHHHHHHHHHHHTCSCCSCCCCTTCHHHHHHHHHHHTTTTCCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcccccCC-CCCHHHHHHHHHHHHHHhcCCCCCCCCCccchHHHHHHHHHHHccCCCHHHHHHHHHH
Confidence 478999999999999877653 7999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhCcC
Q 013420 395 ILSRSIPG 402 (443)
Q Consensus 395 LVeKLlPg 402 (443)
+++++++.
T Consensus 83 ~v~~l~~~ 90 (106)
T 3fp5_A 83 KLLEILKK 90 (106)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhcc
Confidence 99999987
No 10
>2lbb_A Acyl COA binding protein; protein binding, structural genomi seattle structural genomics center for infectious disease,; NMR {Babesia bovis}
Probab=99.96 E-value=1.8e-29 Score=209.89 Aligned_cols=85 Identities=35% Similarity=0.594 Sum_probs=80.5
Q ss_pred HHHHHHHHHHhccCCCCCCCCCChHHHHHHHHhhhccccCCCCCCCCCCcchhhHHHHHHHHHcCCCCHHHHHHHHHHHH
Q 013420 317 RLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVTIL 396 (443)
Q Consensus 317 EaFeAAVefVrsLpk~G~VsqLSnDdKLeLYALYKQATeGDCn~PKPG~fD~vGRAKWnAWKkLKGMSKEEAMrKYIELV 396 (443)
.+|.+|+..|+++++ .+|+++++|+|||||||||+|||++++||+||+++|+||+||++++|||+++||++||++|
T Consensus 12 ~~F~~A~~~vk~l~~----~~ps~~~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~graKw~AW~~l~gmS~eeAm~~YI~lv 87 (96)
T 2lbb_A 12 DDFDAAVKYVSNTTT----MMASNDDKLCFYKYYKQATVGDCNKPKPGMLQLQEKYKWEAWNALRGMSTESAKEAYVKLL 87 (96)
T ss_dssp STHHHHHHHHHHCCC----SCCCTTTTTHHHHHHHHTTTSSCCCCCCCSSCSHHHHHHHHHHHTTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCC----CCCCHHHHHHHHHHHHHHhcCCCCCCCCCcccHHhHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 379999999999973 2689999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhCcCccc
Q 013420 397 SRSIPGCIQ 405 (443)
Q Consensus 397 eKLlPgW~e 405 (443)
++++|.|.+
T Consensus 88 ~~l~~~~~~ 96 (96)
T 2lbb_A 88 DTLAPSWRN 96 (96)
T ss_dssp HHHCGGGTC
T ss_pred HHHhchhcC
Confidence 999999963
No 11
>1mix_A Talin; focal adhesion, integrin binding, FERM domain, cytoskeleton, structural protein; 1.75A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 PDB: 1miz_B 1mk7_B 1mk9_B 1y19_B 3g9w_A 2hrj_A 2g35_A* 2k00_A 2h7d_A* 2h7e_A* 2kgx_B
Probab=98.23 E-value=4.9e-06 Score=72.16 Aligned_cols=84 Identities=25% Similarity=0.263 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCChHHHHHHHHhhhccccCCCCCC--CCCCcchh------------hHHHHHHHHHc
Q 013420 315 LERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREP--QPMALKVS------------ARANWNAWKQL 380 (443)
Q Consensus 315 LEEaFeAAVefVrsLpk~G~VsqLSnDdKLeLYALYKQATeGDCn~P--KPG~fD~v------------GRAKWnAWKkL 380 (443)
+.--|.++..-|-. |.+ ..+.++.+.|.||..||..||++.. .|+.++.. .+.-+++|+++
T Consensus 18 ~~l~y~Q~~~dil~----g~~-~~~~~~a~~Laal~~qa~~Gd~~~~~~~~~~~~~~~~lP~~~~~~~~~~~i~~~~~~~ 92 (206)
T 1mix_A 18 LNLLYVQARDDILN----GSH-PVSFDKACEFAGYQCQIQFGPHNEQKHKPGFLELKDFLPKEYIKQKGERKIFMAHKNC 92 (206)
T ss_dssp HHHHHHHHHHHHHT----TSS-CCCHHHHHHHHHHHHHHHHCSCCTTTSCTTCSCGGGTSCGGGSTTCCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHC----Ccc-ccCHHHHHHHHHHhhhheecCCCcccccCCccchHhhCCHHHhhcccHHHHHHHHHHc
Confidence 34456666665543 332 6789999999999999999999863 46554433 67889999999
Q ss_pred CCCCHHHHHHHHHHHHHhhCcCcc
Q 013420 381 GNMTPEIAMEQYVTILSRSIPGCI 404 (443)
Q Consensus 381 KGMSKEEAMrKYIELVeKLlPgW~ 404 (443)
+|||+.+||.+|++++.++ |.|.
T Consensus 93 ~g~s~~~A~~~yL~~~~~l-~~yG 115 (206)
T 1mix_A 93 GNMSEIEAKVRYVKLARSL-KTYG 115 (206)
T ss_dssp TTCCHHHHHHHHHHHHHHS-TTTT
T ss_pred cCCCHHHHHHHHHHHHHhC-cccC
Confidence 9999999999999999865 5554
No 12
>1ef1_A Moesin; membrane, FERM domain, tail domain, membrane protein; 1.90A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1sgh_A 1j19_A 2emt_A 2ems_A 2d10_A 2d11_A 2yvc_A 2d2q_A 2zpy_A 1gc7_A 1gc6_A 1ni2_A
Probab=95.82 E-value=0.029 Score=51.34 Aligned_cols=84 Identities=15% Similarity=0.105 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCChHHHHHHHHhhhccccCCCCCC--CCCCcc--------hhh-----HHHH-----H
Q 013420 316 ERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREP--QPMALK--------VSA-----RANW-----N 375 (443)
Q Consensus 316 EEaFeAAVefVrsLpk~G~VsqLSnDdKLeLYALYKQATeGDCn~P--KPG~fD--------~vG-----RAKW-----n 375 (443)
.--|.++..-|-. |.+ ..+.++-+.|-||--||..||++.. .|+.++ +.. ...| .
T Consensus 97 ~l~y~Q~~~dil~----g~~-~~~~e~a~~Laal~~q~~~Gd~~~~~~~~~~l~~~~~lP~~~~~~~~~~~~~~~~~I~~ 171 (294)
T 1ef1_A 97 RLFFLQVKEGILN----DDI-YCPPETAVLLASYAVQSKYGDFNKEVHKSGYLAGDKLLPQRVLEQHKLNKDQWEERIQV 171 (294)
T ss_dssp HHHHHHHHHHHHT----TSS-CCCHHHHHHHHHHHHHHHHCSCCTTTSCTTTTTTCCCSCHHHHHHBCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc----Ccc-cCCHHHHHHHHHHHHHHHhCCCCccccChhhccccccCCHHHHhhcCCCHHHHHHHHHH
Confidence 3345555554443 333 5788999999999999999999763 344321 111 2234 6
Q ss_pred HHHHcCCCCHHHHHHHHHHHHHhhCcCccc
Q 013420 376 AWKQLGNMTPEIAMEQYVTILSRSIPGCIQ 405 (443)
Q Consensus 376 AWKkLKGMSKEEAMrKYIELVeKLlPgW~e 405 (443)
.|++++|||+.+|+.+|++++.+ +|.|..
T Consensus 172 ~~~~~~g~s~~~A~~~yL~~~~~-lp~yG~ 200 (294)
T 1ef1_A 172 WHEEHRGMLREDAVLEYLKIAQD-LEMYGV 200 (294)
T ss_dssp HHHHTTTCCHHHHHHHHHHHHTT-STTTTC
T ss_pred HHHHccCCCHHHHHHHHHHHHcc-cCccCc
Confidence 89999999999999999999986 566643
No 13
>4f7g_A Talin-1; alpha-helix bundle, integrin activation, cell adhesion; 2.05A {Mus musculus}
Probab=95.52 E-value=0.023 Score=50.61 Aligned_cols=83 Identities=23% Similarity=0.246 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCChHHHHHHHHhhhccccCCCCCC--CCCCcc-----------hh-hHHHHHHHHHc
Q 013420 315 LERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREP--QPMALK-----------VS-ARANWNAWKQL 380 (443)
Q Consensus 315 LEEaFeAAVefVrsLpk~G~VsqLSnDdKLeLYALYKQATeGDCn~P--KPG~fD-----------~v-GRAKWnAWKkL 380 (443)
+.--|..+..-|-. |.+ ..+.++-+.|-||--||..||++.. .|+.+. -. .+.=...|+++
T Consensus 29 l~l~ylQ~~~dil~----G~~-~~~~e~a~~LAal~~Qae~Gd~~~~~~~~~~~~l~~~lP~~~~~~~~~~~I~~~h~~~ 103 (222)
T 4f7g_A 29 LNLLYVQARDDILN----GSH-PVSFDKACEFAGFQCQIQFGPHNEQKHKAGFLDLKDFLPKEYVKQKGERKIFQAHKNC 103 (222)
T ss_dssp HHHHHHHHHHHHHT----TSS-CCCHHHHHHHHHHHHHHHHCSCCTTTSCSSCSCGGGTSCGGGGGGCCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhC----Ccc-cCCHHHHHHHHHHHHHHHHCCCCchhcccCccchhhccCHHHHhhhhHHHHHHHHHhc
Confidence 44445555554432 332 5788999999999999999998763 232211 11 11224689999
Q ss_pred CCCCHHHHHHHHHHHHHhhCcCc
Q 013420 381 GNMTPEIAMEQYVTILSRSIPGC 403 (443)
Q Consensus 381 KGMSKEEAMrKYIELVeKLlPgW 403 (443)
+|||+.+|+.+|++++.++ |.|
T Consensus 104 ~g~s~~eA~~~yL~~~~~l-~~y 125 (222)
T 4f7g_A 104 GQMSEIEAKVRYVKLARSL-KTY 125 (222)
T ss_dssp TTCCHHHHHHHHHHHHHTS-TTT
T ss_pred cCCCHHHHHHHHHHHHhhc-ccc
Confidence 9999999999999999876 544
No 14
>1h4r_A Merlin; FERM, neurofibromatosis, NF2, structural protein, cytoskeleton, anti-oncogene; 1.8A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1isn_A 3u8z_A
Probab=95.23 E-value=0.038 Score=51.25 Aligned_cols=81 Identities=12% Similarity=0.079 Sum_probs=56.9
Q ss_pred HHHHHHHHHhccCCCCCCCCCChHHHHHHHHhhhccccCCCCCC--CCCCcch--------hh-----HHHH-----HHH
Q 013420 318 LFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREP--QPMALKV--------SA-----RANW-----NAW 377 (443)
Q Consensus 318 aFeAAVefVrsLpk~G~VsqLSnDdKLeLYALYKQATeGDCn~P--KPG~fD~--------vG-----RAKW-----nAW 377 (443)
-|.++..-|-. |.+ ..+.++-++|-||--||..||++.. .|+.++. .. ...| ..|
T Consensus 119 ~y~Q~~~dil~----g~~-~~~~e~a~~Laal~~Qa~~Gd~~~~~~~~~~~~~~~~lP~~~~~~~~~~~~~~~~~I~~~~ 193 (314)
T 1h4r_A 119 FFLQVKKQILD----EKI-YCPPEASVLLASYAVQAKYGDYDPSVHKRGFLAQEELLPKRVINLYQMTPEMWEERITAWY 193 (314)
T ss_dssp HHHHHHHHHHT----TSS-CCCHHHHHHHHHHHHHHHHCSCCTTTSCTTTTTTCCCSCHHHHTTSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhC----CCc-cCCHHHHHHHHHHHHHHHHCCCCccccchhhcchhhcCCHHHHhhccCCHHHHHHHHHHHH
Confidence 44555544432 333 5789999999999999999999763 3432211 00 1233 689
Q ss_pred HHcCCCCHHHHHHHHHHHHHhhCcCcc
Q 013420 378 KQLGNMTPEIAMEQYVTILSRSIPGCI 404 (443)
Q Consensus 378 KkLKGMSKEEAMrKYIELVeKLlPgW~ 404 (443)
+++.|||+.+|+.+|++++.+ +|.|.
T Consensus 194 ~~~~g~s~~eA~~~yL~~~~~-lp~yG 219 (314)
T 1h4r_A 194 AEHRGRARDEAEMEYLKIAQD-LEMYG 219 (314)
T ss_dssp HTTTTCCHHHHHHHHHHHHTT-STTTT
T ss_pred HHcCCCCHHHHHHHHHHHHhc-cCccC
Confidence 999999999999999999976 46553
No 15
>3qij_A Protein 4.1; cytoskeleton, structural genomics, structural genomics conso SGC; 1.80A {Homo sapiens} PDB: 1gg3_A 3bin_A 2he7_A 2rq1_A
Probab=95.08 E-value=0.054 Score=50.62 Aligned_cols=80 Identities=11% Similarity=-0.016 Sum_probs=56.1
Q ss_pred HHHHHHHHhccCCCCCCCCCChHHHHHHHHhhhccccCCCCCC--CCCCcc-----h-----hhHHHHHHHHHcCCCCHH
Q 013420 319 FGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREP--QPMALK-----V-----SARANWNAWKQLGNMTPE 386 (443)
Q Consensus 319 FeAAVefVrsLpk~G~VsqLSnDdKLeLYALYKQATeGDCn~P--KPG~fD-----~-----vGRAKWnAWKkLKGMSKE 386 (443)
|.++..-|-. |.+ ..+.++-+.|-||--||..||++.. .|+.+. + ..+.=..+|+++.|||+.
T Consensus 114 ylQ~~~dil~----G~~-~c~~e~a~~LAAl~~Qae~Gd~~~~~~~~~yl~~~~~~P~~~~~~~~~I~~~h~~~~g~s~~ 188 (296)
T 3qij_A 114 CLQLRQDIVA----GRL-PCSFATLALLGSYTIQSELGDYDPELHGVDYVSDFKLAPNQTKELEEKVMELHKSYRSMTPA 188 (296)
T ss_dssp HHHHHHHHHH----TSS-CCCHHHHHHHHHHHHHHHHCSCCHHHHTTCCCTTSCCSSSCCHHHHHHHHHHHHTCCSCCHH
T ss_pred HHHHHHHHHc----CCC-CCCHHHHHHHHHHHHHHhcCCCCccccchhhCcHhhcCCcCHHHHHHHHHHHHHHccCCCHH
Confidence 4555544432 332 5788999999999999999998742 222221 1 122223679999999999
Q ss_pred HHHHHHHHHHHhhCcCcc
Q 013420 387 IAMEQYVTILSRSIPGCI 404 (443)
Q Consensus 387 EAMrKYIELVeKLlPgW~ 404 (443)
+|+..|++++.+ +|.|.
T Consensus 189 eA~~~yL~~a~~-l~~yG 205 (296)
T 3qij_A 189 QADLEFLENAKK-LSMYG 205 (296)
T ss_dssp HHHHHHHHHHTT-STTTT
T ss_pred HHHHHHHHHHhc-ccccC
Confidence 999999999988 56664
No 16
>3ivf_A Talin-1; FERM domain, cell membrane, cell projection, cytoskeleton, M phosphoprotein, cell adhesion, structural protein; 1.94A {Mus musculus} PDB: 2kma_A 2kc1_A
Probab=94.32 E-value=0.19 Score=47.79 Aligned_cols=83 Identities=22% Similarity=0.225 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCChHHHHHHHHhhhccccCCCCCCC--CCCcch-----------h-hHHHHHHHHHcC
Q 013420 316 ERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQ--PMALKV-----------S-ARANWNAWKQLG 381 (443)
Q Consensus 316 EEaFeAAVefVrsLpk~G~VsqLSnDdKLeLYALYKQATeGDCn~PK--PG~fD~-----------v-GRAKWnAWKkLK 381 (443)
.--|.++..-+-. |.+ ..+.++-+.|-||.-||..||++... |+.+.. . .+.=..+|+++.
T Consensus 184 ~l~y~Q~~~dil~----G~~-~c~~e~a~~LAAl~~qae~Gd~~~~~~~~~~~~l~~~lP~~~~~~~~e~~I~~~~~~~~ 258 (371)
T 3ivf_A 184 NLLYVQARDDILN----GSH-PVSFDKACEFAGFQCQIQFGPHNEQKHKAGFLDLKDFLPKEYVKQKGERKIFQAHKNCG 258 (371)
T ss_dssp HHHHHHHHHHHHT----SSS-CCCHHHHHHHHHHHHHHHHCSCCTTTSCTTCSCGGGTSCGGGTTSCHHHHHHHHHHHTT
T ss_pred HHHHHHhhHHHhC----cee-ecCHHHHHHHHHHHHHHHhCCCChhhcccchhcccccCCHHHhCchHHHHHHHHHHHcc
Confidence 3345555554443 332 57889999999999999999997632 322110 1 122246899999
Q ss_pred CCCHHHHHHHHHHHHHhhCcCcc
Q 013420 382 NMTPEIAMEQYVTILSRSIPGCI 404 (443)
Q Consensus 382 GMSKEEAMrKYIELVeKLlPgW~ 404 (443)
|||+.+|+.+|++++.++ |.|.
T Consensus 259 g~s~~eA~~~yL~~~~~l-~~yG 280 (371)
T 3ivf_A 259 QMSEIEAKVRYVKLARSL-KTYG 280 (371)
T ss_dssp TCCHHHHHHHHHHHHHHS-TTTT
T ss_pred CCCHHHHHHHHHHHHhcc-cccC
Confidence 999999999999999865 5554
No 17
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=92.76 E-value=0.19 Score=51.98 Aligned_cols=83 Identities=19% Similarity=0.230 Sum_probs=58.7
Q ss_pred HHHHHHHHHHhccCCCCCCCCCChHHHHHHHHhhhccccCCCCCC--CCCCcc---h-----hh-----HHHH-----HH
Q 013420 317 RLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREP--QPMALK---V-----SA-----RANW-----NA 376 (443)
Q Consensus 317 EaFeAAVefVrsLpk~G~VsqLSnDdKLeLYALYKQATeGDCn~P--KPG~fD---~-----vG-----RAKW-----nA 376 (443)
--|..+..-|-. |.+ ..+.++-+.|-||--||..||++.. .|+.++ + .. ...| ..
T Consensus 101 LlYlQvk~dIl~----G~l-~c~~e~a~~LAAL~lQae~GDy~~~~~~~~yl~~~~~lP~~vl~~~~~s~e~~~~~I~~~ 175 (575)
T 2i1j_A 101 LFYLQVKNAILS----DEI-YCPPETSVLLASYAVQARHGDHNPAVHGPGFLANDRLLPQRVTDQHKMSREEWEQSITNW 175 (575)
T ss_dssp HHHHHHHHHHHT----TSS-CCCHHHHHHHHHHHHHHHHCSCCTTTCCTTTTTTCCCSCHHHHHTBCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhC----CCC-CCCHHHHHHHHHHHHHHHhcCCChhhcccccccccccCCHHHHhhcCCCHHHHHHHHHHH
Confidence 345555554432 333 6788999999999999999999763 344331 1 11 2334 67
Q ss_pred HHHcCCCCHHHHHHHHHHHHHhhCcCccc
Q 013420 377 WKQLGNMTPEIAMEQYVTILSRSIPGCIQ 405 (443)
Q Consensus 377 WKkLKGMSKEEAMrKYIELVeKLlPgW~e 405 (443)
|+++.|||+.+|+..|++++.+ +|.|..
T Consensus 176 hk~l~G~s~~eA~~~yL~~a~~-lp~YG~ 203 (575)
T 2i1j_A 176 WQEHRGMLREDAMMEYLKIAQD-LEMYGV 203 (575)
T ss_dssp HGGGTTCCHHHHHHHHHHHHTT-STTTTC
T ss_pred HHHccCCCHHHHHHHHHHHHHh-ccccCC
Confidence 9999999999999999999986 466643
No 18
>3au4_A Myosin-X; protein-protein complex, motor protein cargo transportation, protein-apoptosis complex; 1.90A {Homo sapiens} PDB: 3au5_A 3pzd_A
Probab=91.04 E-value=0.7 Score=46.45 Aligned_cols=85 Identities=21% Similarity=0.309 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCChHHHHHHHHhhhccccCCCCCCC--CCCcc------hhh----------------
Q 013420 315 LERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQ--PMALK------VSA---------------- 370 (443)
Q Consensus 315 LEEaFeAAVefVrsLpk~G~VsqLSnDdKLeLYALYKQATeGDCn~PK--PG~fD------~vG---------------- 370 (443)
+.--|..+..-|-. |.+ ..+.++-+.|-||.-|+..||++... +..-+ +..
T Consensus 321 ~~lly~Q~~~dil~----G~~-~~~~e~a~~LAAl~lQ~~~GD~~~~~~~~~l~~~lP~~~l~~~~~~~~k~~s~~~~~l 395 (555)
T 3au4_A 321 FAFMFEQAHEAVIH----GHH-PAPEENLQVLAALRLQYLQGDYTLHAAIPPLEEVYSLQRLKARISQSTKTFSFRTGSV 395 (555)
T ss_dssp HHHHHHHHHHHHHT----TCS-CCCHHHHHHHHHHHHHHHHCSCCTTCCCCCGGGTSCCHHHHHHHHHTTCCEECCTTSC
T ss_pred HHhhHHHHHHHHHC----CCC-CCCHHHHHHHHHHHHHHHcCCCccccchhhhhhhCCHHHhhhhhcccccccccccccc
Confidence 34456666665543 332 57889999999999999999987632 11100 000
Q ss_pred ----------HHHH-------------HHHHHcCCCCHHHHHHHHHHHHHhhCcCccc
Q 013420 371 ----------RANW-------------NAWKQLGNMTPEIAMEQYVTILSRSIPGCIQ 405 (443)
Q Consensus 371 ----------RAKW-------------nAWKkLKGMSKEEAMrKYIELVeKLlPgW~e 405 (443)
...| ..|+++.|||+.+|+.+|++++.++ |.|..
T Consensus 396 ~~~~~~~~~~~~~W~~~~~~~~~~~I~~~~~~~~g~s~~eA~~~yL~~~~~l-p~yG~ 452 (555)
T 3au4_A 396 VRQKVEEEQMLDMWIKEEVSSARASIIDKWRKFQGMNQEQAMAKYMALIKEW-PGYGS 452 (555)
T ss_dssp CEECCCCHHHHHHHTHHHHHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHTTS-TTTTC
T ss_pred ccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhC-CCcCc
Confidence 1122 5788999999999999999999876 66543
No 19
>4dxa_B KREV interaction trapped protein 1; GTPase, FERM, protein-protein interaction, GTP binding, CYTO protein binding; HET: GSP; 1.95A {Homo sapiens} PDB: 3u7d_A
Probab=88.28 E-value=0.76 Score=43.11 Aligned_cols=81 Identities=14% Similarity=0.050 Sum_probs=54.2
Q ss_pred HHHHHHHHHHhccCCCCCCCCCChHHHHHHHHhhhccccCCCCC--CCCCCcc---h---------------hhHHHHHH
Q 013420 317 RLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCRE--PQPMALK---V---------------SARANWNA 376 (443)
Q Consensus 317 EaFeAAVefVrsLpk~G~VsqLSnDdKLeLYALYKQATeGDCn~--PKPG~fD---~---------------vGRAKWnA 376 (443)
--|.++..-|-.. .+ ..+.++-+.|-||--||..||++. ..|+.+. + -...=..+
T Consensus 116 l~y~Q~~~dil~G----~~-~c~~e~a~~LAAl~~q~e~Gd~~~~~~~~~~l~~~~l~~~lP~~~~~~~~~~~~~~I~~~ 190 (322)
T 4dxa_B 116 ILFDEARYNLLKG----FY-TAPDAKLITLASLLLQIVYGNYESKKHKQGFLNEENLKSIVPVTKLKSKAPHWTNRILHE 190 (322)
T ss_dssp HHHHHHHHHHHHT----CC-CCCHHHHHHHHHHHHHHHHCSCCHHHHSSSCSCHHHHTTTSCTTTTTTTGGGSHHHHHHH
T ss_pred HHHHHHHHHHHCC----cc-cCCHHHHHHHHHHHHHHHhCCCCcccccccccchhhhhhhCCHHHHhcCHHHHHHHHHHH
Confidence 3456666555432 22 578899999999999999999864 2333321 0 01222478
Q ss_pred HHHc---CCCCHH--HHHHHHHHHHHhhCcCc
Q 013420 377 WKQL---GNMTPE--IAMEQYVTILSRSIPGC 403 (443)
Q Consensus 377 WKkL---KGMSKE--EAMrKYIELVeKLlPgW 403 (443)
|+++ .|||++ +|+.+|++++.++ |.|
T Consensus 191 h~~~~~~~g~s~~~a~a~~~yL~~~~~l-p~y 221 (322)
T 4dxa_B 191 YKNLSTSEGVSKEMHHLQRMFLQNCWEI-PTY 221 (322)
T ss_dssp HHHHHC--CCCCCHHHHHHHHHHHHHTS-TTT
T ss_pred HHhcccccCCChhHHHHHHHHHHHHhcC-CCc
Confidence 9999 999975 4699999999854 544
No 20
>2al6_A Focal adhesion kinase 1; transferase; 2.35A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 2j0m_A* 2aeh_A
Probab=87.25 E-value=0.74 Score=44.36 Aligned_cols=83 Identities=13% Similarity=0.206 Sum_probs=55.0
Q ss_pred HHHHHHHHHH-HHhccCCCCCCCCCChHHHHHHHHhhhccccCCCCCCCCC----------------Cc--ch-------
Q 013420 315 LERLFGAAVA-FVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPM----------------AL--KV------- 368 (443)
Q Consensus 315 LEEaFeAAVe-fVrsLpk~G~VsqLSnDdKLeLYALYKQATeGDCn~PKPG----------------~f--D~------- 368 (443)
+.--|.++.. +++.. +...+.+.-+.|-||--|+..||++...+. ++ ++
T Consensus 114 ~~~~y~Q~r~Dil~g~-----~~~~~~e~al~LAaL~~q~~~gD~~~~~~~~k~~~~~l~k~~~l~~flP~~~~~~~~~~ 188 (375)
T 2al6_A 114 LNFFYQQVKNDYMLEI-----ADQVDQEIALKLGCLEIRRSYGEMRGNALEKKSNYEVLEKDVGLRRFFPKSLLDSVKAK 188 (375)
T ss_dssp HHHHHHHHHHHHHHHT-----TTTSCHHHHHHHHHHHHHHHTTTSCTTGGGSHHHHHHHHHTTCGGGTSCHHHHHSSCHH
T ss_pred HHHHHHHHHHHHHcCC-----CccCCHHHHHHHHHHHHHHHhhhccchhhcccCCHHHhhhcccHHHhCCHHHHHHhChH
Confidence 3445555544 44432 124688999999999999999998532110 00 01
Q ss_pred -hhHHHHHHHHHcCCCCHHHHHHHHHHHHHhhCcCc
Q 013420 369 -SARANWNAWKQLGNMTPEIAMEQYVTILSRSIPGC 403 (443)
Q Consensus 369 -vGRAKWnAWKkLKGMSKEEAMrKYIELVeKLlPgW 403 (443)
..+.=.+.|+++.|||+++||.+|++++.+ +|.|
T Consensus 189 ~~~k~I~~~~k~~~g~s~~eAk~~yL~~~~~-l~~y 223 (375)
T 2al6_A 189 TLRKLIQQTFRQFANLNREESILKFFEILSP-VYRF 223 (375)
T ss_dssp HHHHHHHHHHHTTTTCCHHHHHHHHHHHHTT-TCCC
T ss_pred HHHHHHHHHHHHhhCCCHHHHHHHHHHHHhh-cccC
Confidence 011113778899999999999999999998 4544
No 21
>4eku_A Protein-tyrosine kinase 2-beta; proline-rich tyrosine kinase 2, FERM domain, transferase; 3.25A {Homo sapiens}
Probab=76.25 E-value=3.5 Score=40.73 Aligned_cols=85 Identities=11% Similarity=0.105 Sum_probs=56.3
Q ss_pred HHHHHHHHHH-HHhccCCCCCCCCCChHHHHHHHHhhhccccCCCCCCC----C---------C---Cc--chhh-----
Q 013420 315 LERLFGAAVA-FVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQ----P---------M---AL--KVSA----- 370 (443)
Q Consensus 315 LEEaFeAAVe-fVrsLpk~G~VsqLSnDdKLeLYALYKQATeGDCn~PK----P---------G---~f--D~vG----- 370 (443)
+.--|.++.. +++... .+++.+.-++|-||-.|+-.||++... + + ++ ++..
T Consensus 134 ~~ylY~Q~r~D~l~g~~-----~~~~~e~al~LAaL~~q~~~gd~~~~a~~~k~~~~~l~k~~~lk~flP~~l~~~ik~k 208 (392)
T 4eku_A 134 LLYFYQQLRNDYMQRYA-----SKVSEGMALQLGCLELRRFFKDMPHNALDKKSNFELLEKEVGLDLFFPKQMQENLKPK 208 (392)
T ss_dssp HHHHHHHHHHHHHHHTT-----TTSCHHHHHHHHHHHHHHHTTTSCTTGGGSHHHHHHHHHHTCGGGTSCHHHHHHSCHH
T ss_pred HHHHHHHHHHHHHcCCC-----CCCCHHHHHHHHHHHHHHHhhhcchhhhccCCCHHHHhhhccHHHhcCHHHHhhcCHH
Confidence 4445655544 455331 257888999999999999999876421 0 0 01 1111
Q ss_pred ---HHHHHHHHHcCCCCHHHHHHHHHHHHHhhCcCccc
Q 013420 371 ---RANWNAWKQLGNMTPEIAMEQYVTILSRSIPGCIQ 405 (443)
Q Consensus 371 ---RAKWnAWKkLKGMSKEEAMrKYIELVeKLlPgW~e 405 (443)
+.=.+.++++.|||..+||.+|+..+.++ |.|..
T Consensus 209 ~~rk~I~~~~kk~~~ls~~eakl~YL~~l~~L-p~yG~ 245 (392)
T 4eku_A 209 QFRKMIQQTFQQYASLREEECVMKFFNTLAGF-ANIDQ 245 (392)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTS-SCCSC
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhh-hccCc
Confidence 11124677889999999999999999987 77643
No 22
>3pvl_A Myosin VIIA isoform 1; protein complex, novel folding, protein cargo binding, cargo proteins, motor protein-protein transport complex; 2.80A {Mus musculus}
Probab=75.25 E-value=6.8 Score=41.17 Aligned_cols=83 Identities=14% Similarity=0.094 Sum_probs=54.3
Q ss_pred HHHHHHHHHHhccCCCCCCCCCChH-HHHHHHHhhhccccCCCCCCC----------CCC-cch-hhHHHH-----HHHH
Q 013420 317 RLFGAAVAFVGNKCNAGRISSIGSD-VKMQLYGLHKIATVGPCREPQ----------PMA-LKV-SARANW-----NAWK 378 (443)
Q Consensus 317 EaFeAAVefVrsLpk~G~VsqLSnD-dKLeLYALYKQATeGDCn~PK----------PG~-fD~-vGRAKW-----nAWK 378 (443)
--|..+..-|-. |.+ ..+.+ +...|-||.-||..||++.+. |.. +.- .....| .+|+
T Consensus 372 LlYlQ~k~dIl~----Grl-pc~~E~~a~~LAAl~~Qae~Gd~~~~~~~~~~L~~~lP~~~l~~~~~~~~w~~~I~~~hk 446 (655)
T 3pvl_A 372 LIYQQVVRGVKF----GEY-RCEKEDDLAELASQQYFVDYGSEMILERLLSLVPTYIPDREITPLKNLEKWAQLAIAAHK 446 (655)
T ss_dssp HHHHHHHHHHHH----TSS-CCSSHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHSCGGGCCSSSCHHHHHHHHHHHHH
T ss_pred HHHHHHhccccc----Ccc-CCChHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHhCCHHHHhccCCHHHHHHHHHHHHH
Confidence 345555554433 232 45545 889999999999999986421 211 111 123344 5788
Q ss_pred Hc----CCCCHHHHHHHHHHHHHhhCcCcc
Q 013420 379 QL----GNMTPEIAMEQYVTILSRSIPGCI 404 (443)
Q Consensus 379 kL----KGMSKEEAMrKYIELVeKLlPgW~ 404 (443)
++ +|||+.+|+.+|++++.+-+|-|.
T Consensus 447 k~~~~~~g~s~~eAk~~yL~~a~~~lp~YG 476 (655)
T 3pvl_A 447 KGIYAQRRTDSQKVKEDVVNYARFKWPLLF 476 (655)
T ss_dssp HHHHTTCSSCHHHHHHHHHHHHHHHCTTTS
T ss_pred hhhccccCCCHHHHHHHHHHHHHHhccccC
Confidence 88 999999999999999954456553
No 23
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=36.39 E-value=34 Score=34.93 Aligned_cols=63 Identities=17% Similarity=0.274 Sum_probs=46.8
Q ss_pred CCChHHHHHHHHhhhccccCCCCCCC-------------CC---Ccc--hh--hHHH------HHHHHHcCCCCHHHHHH
Q 013420 337 SIGSDVKMQLYGLHKIATVGPCREPQ-------------PM---ALK--VS--ARAN------WNAWKQLGNMTPEIAME 390 (443)
Q Consensus 337 qLSnDdKLeLYALYKQATeGDCn~PK-------------PG---~fD--~v--GRAK------WnAWKkLKGMSKEEAMr 390 (443)
..+.+.-|.|-+|-.|+..||++..+ .| ++. +. -+.| .+.|+++.+++.++||-
T Consensus 132 ~~~~~~al~La~l~~~~~~~d~~~~a~~~~~~~~~~~k~~~~~~fiP~~~~~~~~~~~~~k~i~~~~k~~~~~~~~~~~l 211 (656)
T 2j0j_A 132 QVDQEIALKLGCLEIRRSYGEMRGNALEKKSNYEVLEKDVGLRRFFPKSLLDSVKAKTLRKLIQQTFRQFANLNREESIL 211 (656)
T ss_dssp GSCHHHHHHHHHHHHHHHTTTSCTTGGGSHHHHHHHHHTTTGGGTSCHHHHHHSCHHHHHHHHHHHHGGGTTCCHHHHHH
T ss_pred cccHhHHHHHHHHHHHHHhhhccchhhhcCCCHHHHHhhccHHHhCCHHHHHHhhhhHHHHHHHHHHHHHhcCCHHHHHH
Confidence 36789999999999999999995431 11 011 00 1222 67889999999999999
Q ss_pred HHHHHHHhh
Q 013420 391 QYVTILSRS 399 (443)
Q Consensus 391 KYIELVeKL 399 (443)
+|++.+..+
T Consensus 212 k~l~~l~~~ 220 (656)
T 2j0j_A 212 KFFEILSPV 220 (656)
T ss_dssp HHHHHHGGG
T ss_pred HHHHHhccc
Confidence 999999884
Done!