BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013423
(443 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255537779|ref|XP_002509956.1| protein binding protein, putative [Ricinus communis]
gi|223549855|gb|EEF51343.1| protein binding protein, putative [Ricinus communis]
Length = 597
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 203/343 (59%), Positives = 255/343 (74%), Gaps = 19/343 (5%)
Query: 4 ERESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVF 63
E ES+LVRLCIEAAC+S ES+ KWRRQRR+LERLP+ LAD LLR L+ RRL+FPSLLEVF
Sbjct: 2 ETESQLVRLCIEAACESRESIDKWRRQRRTLERLPSPLADILLRRLLHRRLLFPSLLEVF 61
Query: 64 KHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLS 123
K + E ++LRGEN+VDAEWMAYLGAFRYLR LN+ADC ++TSSALW+LTGMT LKELDLS
Sbjct: 62 KQSVEVVDLRGENAVDAEWMAYLGAFRYLRYLNLADCNKITSSALWSLTGMTSLKELDLS 121
Query: 124 RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRS 183
R VKVTDAG++HLLSIS+LE L + ETGLTA G+ALL+SL NLSVLDLGGLPVTD+ L S
Sbjct: 122 RSVKVTDAGIRHLLSISSLEILRIPETGLTAKGVALLTSLTNLSVLDLGGLPVTDMALSS 181
Query: 184 LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNL----- 238
LQVLTKLEYLDLWGS +SN G AVL++FP+LSFLNL WT VT+LP++ SLE LNL
Sbjct: 182 LQVLTKLEYLDLWGSNISNNGVAVLQLFPKLSFLNLGWTSVTRLPSMLSLEYLNLSNCTI 241
Query: 239 -SFIQQVGAE-----TDLVLSLTALQN----LNHLERLNLEQTQVSDATL---FPLSTFK 285
S ++ G T ++LS N ++E L VS+++L + L K
Sbjct: 242 ESLLEGDGDGDKAPLTKVILSGATFPNEAEAFYNIEPRFLSFLDVSNSSLQGFYFLHDMK 301
Query: 286 ELIHLSLRNASLTDVSLHQLSSL-SKLTNLSIRDAVLTNSGLG 327
L HL L + + D ++ ++ + + LTNL++ +T++GL
Sbjct: 302 MLEHLDLSSTMMGDDAIEAVACIGANLTNLNLSKTRVTSAGLA 344
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 137/300 (45%), Positives = 180/300 (60%), Gaps = 19/300 (6%)
Query: 132 GMKHLLSISTLEKLWLSETGLTADGIALLSSL-QNLSVLDLGGLPVTDLVLRSL-QVLTK 189
G L + LE L LS T + D I ++ + NL+ L+L VT L L + + K
Sbjct: 293 GFYFLHDMKMLEHLDLSSTMMGDDAIEAVACIGANLTNLNLSKTRVTSAGLAILAEHVPK 352
Query: 190 LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETD 249
LEYL L + V + + + M L ++L+ T + FI+Q+G ET+
Sbjct: 353 LEYLSLSHALVDDFALSYIGMMSSLKVVDLSNTNIK-------------GFIRQMGVETN 399
Query: 250 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 309
L+ SL ALQ L+ L+ LNLE TQV DA + P+S+F+EL HLSL++ASL D +L+ LSSLS
Sbjct: 400 LIPSLKALQGLSGLQSLNLEHTQVRDAAVAPVSSFQELSHLSLKSASLADETLYHLSSLS 459
Query: 310 KLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSV 369
KLT+L I DAVLTN GL F+PP +LK+LDL G WLLTE+AI FC HP I++ HEL
Sbjct: 460 KLTSLVIGDAVLTNCGLDLFRPPVALKMLDLRGCWLLTEEAISSFCTKHPAIKLRHELLN 519
Query: 370 ICPSDQIGSNGPSPSRTSLRASLVKQKQDPM----PMSHSFLDQRLKYSREELLELQYSS 425
+ ++ S SPSR R V +KQ M PM F+DQRLKYSREELL LQY S
Sbjct: 520 VSSPNESSSYRASPSRILSRPPHVSRKQGKMPVSWPMPQHFIDQRLKYSREELLALQYQS 579
>gi|297742329|emb|CBI34478.3| unnamed protein product [Vitis vinifera]
Length = 588
Score = 341 bits (875), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 185/338 (54%), Positives = 250/338 (73%), Gaps = 17/338 (5%)
Query: 6 ESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKH 65
E+ LV LCIEAA QS ++V+KWRRQRR+L+R+P+HLA++LL LIRRR++ PSLLEVFK
Sbjct: 9 ETRLVCLCIEAASQSRDAVEKWRRQRRTLQRMPSHLAEALLHRLIRRRILNPSLLEVFKF 68
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
+ E I+LRGE+SVDAEWMAY+G F L SLN+ADC+R+T+SALW + GM LKELDLSRC
Sbjct: 69 SVEKIDLRGESSVDAEWMAYIGGFCCLCSLNIADCQRITNSALWPIIGMPNLKELDLSRC 128
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+K +D+G++HL+SI TL+KL +SETG+TADGI L+SSL NLSVLDLGGLPVTDLVL SLQ
Sbjct: 129 IKFSDSGLRHLISIRTLQKLCISETGVTADGINLVSSLTNLSVLDLGGLPVTDLVLSSLQ 188
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNL------S 239
VLTKL+YLDLWGS++SN+GAA L +FP+LSFLN+AWT VT LP++ S+ CLN+ S
Sbjct: 189 VLTKLQYLDLWGSKISNKGAADLVVFPKLSFLNIAWTDVTTLPDLPSIACLNMSNCTIHS 248
Query: 240 FIQQVGAETDL-VLSLTALQNLNHLERLNLEQT------QVSDATLFP---LSTFKELIH 289
+ GA+ L ++++ LN E +T VS ++L LS K L H
Sbjct: 249 MFEGEGAKALLEKITVSGATFLNVSEAFLFIETSFLSFLDVSRSSLNSFCFLSCMKALEH 308
Query: 290 LSLRNASLTDVSLHQLSSL-SKLTNLSIRDAVLTNSGL 326
L L + D S+ ++ + + L NL++ + ++++G+
Sbjct: 309 LDLSFTMMGDDSIQLIACIGANLRNLNLSNTRVSSAGV 346
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 130/295 (44%), Positives = 180/295 (61%), Gaps = 25/295 (8%)
Query: 155 DGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL-TKLEYLDLWGSQVSNRGAAVLK-MFP 212
+ LS ++ L LDL + D ++ + + L L+L ++VS+ G ++L P
Sbjct: 295 NSFCFLSCMKALEHLDLSFTMMGDDSIQLIACIGANLRNLNLSNTRVSSAGVSILAGCVP 354
Query: 213 RLSFLNLAWT-----GVTKLPNISSLECLNLSFIQQVG---AETDLV--LSLTALQNLNH 262
L ++L+ T ++ + +SS++ +NLS G ++++LV LSL AL +LN+
Sbjct: 355 NLETISLSHTPVDDVAISYISMMSSVKIINLSNTNVKGLIWSDSELVWELSLAALHSLNY 414
Query: 263 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 322
++RL+LE TQV D L PL F++L LSL+ LTD+SL+QLSSL L NLSI D VLT
Sbjct: 415 VKRLDLEGTQVEDEALCPLLRFQQLNELSLKGTRLTDLSLYQLSSLPNLINLSIGDTVLT 474
Query: 323 NSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPS 382
N GL SFKPP +LKLLDL G WLLTEDAIL F K P+IEV HEL I PS+Q SN S
Sbjct: 475 NGGLNSFKPPATLKLLDLRGCWLLTEDAILSFHKNDPQIEVRHELVHITPSEQNASNRSS 534
Query: 383 PSRTSLRASLVKQKQDPMPMSHS------FLDQRLKYSREELLELQYSSLSLARP 431
PS+ +KQ +P S S +DQR KYSREELL +++S+L+L P
Sbjct: 535 PSQKG-------KKQQKLPKSQSRSKEETVIDQRWKYSREELLAMEHSTLALNFP 582
>gi|225426352|ref|XP_002266070.1| PREDICTED: uncharacterized protein LOC100261612 [Vitis vinifera]
Length = 598
Score = 341 bits (874), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 185/338 (54%), Positives = 250/338 (73%), Gaps = 17/338 (5%)
Query: 6 ESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKH 65
E+ LV LCIEAA QS ++V+KWRRQRR+L+R+P+HLA++LL LIRRR++ PSLLEVFK
Sbjct: 9 ETRLVCLCIEAASQSRDAVEKWRRQRRTLQRMPSHLAEALLHRLIRRRILNPSLLEVFKF 68
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
+ E I+LRGE+SVDAEWMAY+G F L SLN+ADC+R+T+SALW + GM LKELDLSRC
Sbjct: 69 SVEKIDLRGESSVDAEWMAYIGGFCCLCSLNIADCQRITNSALWPIIGMPNLKELDLSRC 128
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+K +D+G++HL+SI TL+KL +SETG+TADGI L+SSL NLSVLDLGGLPVTDLVL SLQ
Sbjct: 129 IKFSDSGLRHLISIRTLQKLCISETGVTADGINLVSSLTNLSVLDLGGLPVTDLVLSSLQ 188
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNL------S 239
VLTKL+YLDLWGS++SN+GAA L +FP+LSFLN+AWT VT LP++ S+ CLN+ S
Sbjct: 189 VLTKLQYLDLWGSKISNKGAADLVVFPKLSFLNIAWTDVTTLPDLPSIACLNMSNCTIHS 248
Query: 240 FIQQVGAETDL-VLSLTALQNLNHLERLNLEQT------QVSDATLFP---LSTFKELIH 289
+ GA+ L ++++ LN E +T VS ++L LS K L H
Sbjct: 249 MFEGEGAKALLEKITVSGATFLNVSEAFLFIETSFLSFLDVSRSSLNSFCFLSCMKALEH 308
Query: 290 LSLRNASLTDVSLHQLSSL-SKLTNLSIRDAVLTNSGL 326
L L + D S+ ++ + + L NL++ + ++++G+
Sbjct: 309 LDLSFTMMGDDSIQLIACIGANLRNLNLSNTRVSSAGV 346
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 128/298 (42%), Positives = 180/298 (60%), Gaps = 21/298 (7%)
Query: 155 DGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL-TKLEYLDLWGSQVSNRGAAVLK-MFP 212
+ LS ++ L LDL + D ++ + + L L+L ++VS+ G ++L P
Sbjct: 295 NSFCFLSCMKALEHLDLSFTMMGDDSIQLIACIGANLRNLNLSNTRVSSAGVSILAGCVP 354
Query: 213 RLSFLNLAWT-----GVTKLPNISSLECLNLSFIQQVG---AETDLV--LSLTALQNLNH 262
L ++L+ T ++ + +SS++ +NLS G ++++LV LSL AL +LN+
Sbjct: 355 NLETISLSHTPVDDVAISYISMMSSVKIINLSNTNVKGLIWSDSELVWELSLAALHSLNY 414
Query: 263 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 322
++RL+LE TQV D L PL F++L LSL+ LTD+SL+QLSSL L NLSI D VLT
Sbjct: 415 VKRLDLEGTQVEDEALCPLLRFQQLNELSLKGTRLTDLSLYQLSSLPNLINLSIGDTVLT 474
Query: 323 NSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPS 382
N GL SFKPP +LKLLDL G WLLTEDAIL F K P+IEV HEL I PS+Q SN S
Sbjct: 475 NGGLNSFKPPATLKLLDLRGCWLLTEDAILSFHKNDPQIEVRHELVHITPSEQNASNRSS 534
Query: 383 PSRTSLRASLVKQKQD------PMPMSHSFLD---QRLKYSREELLELQYSSLSLARP 431
PS+ + + + Q + M FL+ QR KYSREELL +++S+L+L P
Sbjct: 535 PSQKGKKQQKLPKSQSRSKEETVIGMEFPFLESSYQRWKYSREELLAMEHSTLALNFP 592
>gi|449464060|ref|XP_004149747.1| PREDICTED: uncharacterized protein LOC101203036 [Cucumis sativus]
gi|449505065|ref|XP_004162366.1| PREDICTED: uncharacterized protein LOC101225004 [Cucumis sativus]
Length = 586
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 190/374 (50%), Positives = 263/374 (70%), Gaps = 18/374 (4%)
Query: 6 ESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKH 65
E+ LV LCI +AC+S +SV+KWRRQ+R+LERLP+HLAD+LLR L RRL++PSLLEVFK+
Sbjct: 2 ENRLVELCINSACRSKDSVEKWRRQKRTLERLPSHLADALLRRLHARRLLYPSLLEVFKY 61
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
E ++L GEN+VD+EWMAYLG+FRYL+SLNV++C R++SS +W ++GMT L+EL++SRC
Sbjct: 62 TIEVVDLSGENAVDSEWMAYLGSFRYLQSLNVSNCHRLSSSGVWTISGMTTLRELNVSRC 121
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+KVTDAG++HLLSI TLEKL ++ETG+TA G+ LLSSL+ L LDLGGLPVTD L SLQ
Sbjct: 122 LKVTDAGIRHLLSIPTLEKLCIAETGITAHGVTLLSSLKTLVFLDLGGLPVTDQALSSLQ 181
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNL------S 239
VLTKL+YLDLWGS++SN G+ VL+MFP+LSFLN+AWT VTK PN+ LECLN+ S
Sbjct: 182 VLTKLQYLDLWGSKISNSGSDVLQMFPKLSFLNIAWTSVTKFPNLPHLECLNMSNCIIDS 241
Query: 240 FIQQVGAET---DLVLSLTALQN----LNHLERLNLEQTQVSDATLFP---LSTFKELIH 289
++ +GA+ L+ S N L + L S+A+L LS K + H
Sbjct: 242 TLKGLGAKVPPRKLIASGATFSNETEDLGFVAMDALYYLDFSNASLHRFCFLSRMKAVEH 301
Query: 290 LSLRNASLTDVSLHQLSSLSK-LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 348
L L + ++ D S+ ++S+ + L L++ +++SG+GS S L L + +
Sbjct: 302 LDLSSTTIGDSSVELIASVGENLKYLNLSCTAVSSSGIGSLAGKVS-NLETLSLSHTMVD 360
Query: 349 DAILQFCKMHPRIE 362
D L + M P ++
Sbjct: 361 DVALSYMNMMPSLK 374
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 163/305 (53%), Gaps = 21/305 (6%)
Query: 139 ISTLEKLWLSETGLTADGIALLSSL-QNLSVLDLGGLPVTDLVLRSLQ-VLTKLEYLDLW 196
+ +E L LS T + + L++S+ +NL L+L V+ + SL ++ LE L L
Sbjct: 296 MKAVEHLDLSSTTIGDSSVELIASVGENLKYLNLSCTAVSSSGIGSLAGKVSNLETLSLS 355
Query: 197 GSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTA 256
+ V + + + M P L ++L+ T + +I ET V SLT
Sbjct: 356 HTMVDDVALSYMNMMPSLKCIDLSETDIK-------------GYIHLSAPETVKVFSLTE 402
Query: 257 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 316
LQNL+ LE LNLE T V D +L PLS F++L HL LR+ S TD L LS L L LSI
Sbjct: 403 LQNLDCLEMLNLEHTHVDDESLRPLSRFRKLSHLMLRSPSFTDTVLSYLSILPNLKTLSI 462
Query: 317 RDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQI 376
RDAVLTN +FKP +L+ +DL G WLLTED + F + P+I+V HEL S+
Sbjct: 463 RDAVLTNQAFDTFKPVATLQKIDLRGCWLLTEDGLSVFHRRFPQIDVRHELFHFS-SNPT 521
Query: 377 GSNGPSPSRTSLRASLVKQKQDPMPMSHSFLDQRLKYSREELLELQYSSLSLARPDDSST 436
++ PS + L Q M F+DQRLKYS+EELL LQ+SSL P S++
Sbjct: 522 STDQPSTHFIPKKIQL-NQTSRSTGMPSYFVDQRLKYSKEELLALQFSSL----PHGSTS 576
Query: 437 QDAMG 441
MG
Sbjct: 577 VPEMG 581
>gi|356513289|ref|XP_003525346.1| PREDICTED: uncharacterized protein LOC100814174 [Glycine max]
Length = 589
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 183/339 (53%), Positives = 248/339 (73%), Gaps = 15/339 (4%)
Query: 4 ERESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVF 63
+ ESELV CIEAAC+S ESV KWR Q RSL+RLP+HLADSLLR LI RRL++PSLLEVF
Sbjct: 2 KSESELVGFCIEAACESRESVDKWRMQSRSLDRLPSHLADSLLRRLIARRLLYPSLLEVF 61
Query: 64 KHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLS 123
KH+AE +++RG+NSVDAEWMAYLGA+R+LR LN++DC RV++SALW +TGM+ L+ELDLS
Sbjct: 62 KHSAEEVDVRGDNSVDAEWMAYLGAYRHLRYLNLSDCHRVSTSALWPITGMSSLQELDLS 121
Query: 124 RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRS 183
RC KV DAG+ H+LSI LE+L +SET +TA G+ LL+SL+NLS+LDLGGLPV D+ L S
Sbjct: 122 RCFKVNDAGINHILSIPNLERLRISETSVTAKGVKLLASLKNLSLLDLGGLPVDDVALTS 181
Query: 184 LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLS--FI 241
LQVL +L Y+DLWGS++SN+GA+VL FP+L++LNLAWT VTKLP +S LE LN+S I
Sbjct: 182 LQVLKRLHYIDLWGSKISNKGASVLNTFPKLTYLNLAWTSVTKLPKLSFLEYLNMSNCTI 241
Query: 242 QQVGAETDLVLS---LTALQNLNHLERLNLEQTQ------VSDAT---LFPLSTFKELIH 289
+ + L+ L+ +N E L T V++++ F LS K + H
Sbjct: 242 DSILEDDKAPLAKLILSGAMFMNEAEALLYANTNFLSFLDVANSSFHRFFFLSKMKVIEH 301
Query: 290 LSLRNASLTDVSLHQLS-SLSKLTNLSIRDAVLTNSGLG 327
L+L + + D S+ ++ + L +L++ ++++GLG
Sbjct: 302 LNLSSCMMGDDSVEMVACAGGNLKSLNLSGTRVSSAGLG 340
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 155/392 (39%), Positives = 221/392 (56%), Gaps = 42/392 (10%)
Query: 44 SLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVD-AEWMAYLGAFRYLRSLNVADCRR 102
S L +L S+LE K + L G ++ AE + Y +L L+VA+
Sbjct: 229 SFLEYLNMSNCTIDSILEDDKAPLAKLILSGAMFMNEAEALLYANT-NFLSFLDVANS-- 285
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
+ + L+ M ++ L+LS C+ D+ + L+ L LS T +++ G+ +L+
Sbjct: 286 -SFHRFFFLSKMKVIEHLNLSSCMMGDDSVEMVACAGGNLKSLNLSGTRVSSAGLGILA- 343
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT 222
G +P LE L L + V + + + M P L ++L+ T
Sbjct: 344 ---------GHVP-------------HLEILSLSQTPVDDTAISFISMMPSLKDVDLSNT 381
Query: 223 GVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 282
+ F+ Q + + +LSL ALQNL LERLNLE TQV D L+PLS
Sbjct: 382 NIK-------------GFLHQGRTDVNSLLSLMALQNLK-LERLNLEHTQVRDEALYPLS 427
Query: 283 TFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 342
+F+EL +LSL++ASL D+SL+ LSS+ KLTNLSI DAVLTN GL FK P +LKLLDL G
Sbjct: 428 SFQELRYLSLKSASLADISLYYLSSIPKLTNLSICDAVLTNYGLDMFKAPETLKLLDLKG 487
Query: 343 GWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSLRASLVKQKQDPMPM 402
WLLTED IL FC+ HP++EV HEL + P +Q G N SPSR++ + + +K+D +P+
Sbjct: 488 CWLLTEDTILSFCRNHPQVEVRHELGTLFPVNQNGLNHSSPSRSTSKTMQMTKKKDQIPL 547
Query: 403 SHSFLDQRLKYSREELLELQYSSLSLARPDDS 434
S F+DQRLKYSR+ELL LQ++SL LA +S
Sbjct: 548 SPYFVDQRLKYSRDELLALQFTSLPLASSSES 579
>gi|297803756|ref|XP_002869762.1| hypothetical protein ARALYDRAFT_492485 [Arabidopsis lyrata subsp.
lyrata]
gi|297315598|gb|EFH46021.1| hypothetical protein ARALYDRAFT_492485 [Arabidopsis lyrata subsp.
lyrata]
Length = 590
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 174/343 (50%), Positives = 238/343 (69%), Gaps = 21/343 (6%)
Query: 6 ESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKH 65
ES LVRLCIE AC+SG++V++WR QRRSLERLP HLAD+LLR L+ +RL+FPSLLE FKH
Sbjct: 2 ESPLVRLCIEEACKSGDAVERWRLQRRSLERLPPHLADALLRRLLHKRLLFPSLLEGFKH 61
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
+ E I+LRGE+S++AEWMAY+G F L SLN++DC+R+ SS LW +TG+T L ELDLSRC
Sbjct: 62 SVENIDLRGESSINAEWMAYIGGFVNLVSLNLSDCQRINSSTLWPITGLTSLTELDLSRC 121
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
KVTDAG+KHL S+ L+KLW+S+TG+T GI+LL+SLQ LS+LDLGGLPVTD L +LQ
Sbjct: 122 FKVTDAGIKHLQSVVNLKKLWISQTGVTKVGISLLASLQKLSLLDLGGLPVTDHNLIALQ 181
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQV- 244
LTKLEYLD+WGS V+N+GA + F LSFLNL+WT VT+ PNI LECL+++ V
Sbjct: 182 ELTKLEYLDIWGSNVTNQGAISILQFSNLSFLNLSWTSVTQTPNIPHLECLHMNMCTIVS 241
Query: 245 -----------------GAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 287
GA + N + + L++ +T + + + + T L
Sbjct: 242 EPKTHCSLASLKKLVLSGANFSAETEALSFTNKSSITYLDVSKTSLQNFSF--IETMINL 299
Query: 288 IHLSLRNASLTDVSLHQLSSLSK-LTNLSIRDAVLTNSGLGSF 329
HL L + + D S+ ++ + + L NL++ D +T++G+G+
Sbjct: 300 EHLDLSSTAFGDDSVGFVACVGENLKNLNVSDTKITSAGVGNL 342
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 121/355 (34%), Positives = 184/355 (51%), Gaps = 49/355 (13%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIAL-LSSLQNLSVLDLGGLP 175
L+ L ++ C V++ K S+++L+KL LS +A+ AL ++ +++ LD+
Sbjct: 229 LECLHMNMCTIVSEP--KTHCSLASLKKLVLSGANFSAETEALSFTNKSSITYLDVSKTS 286
Query: 176 VTDLVLRSLQVLTKLEYLDL---------------WGSQVSNRGAAVLKM---------- 210
+ + ++ + LE+LDL G + N + K+
Sbjct: 287 LQNFSF--IETMINLEHLDLSSTAFGDDSVGFVACVGENLKNLNVSDTKITSAGVGNLAG 344
Query: 211 -FPRLSFLNLAWTGV---------TKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNL 260
P+L +L+ T V T +P + +L+ L ++ I++ AE SL ALQ+L
Sbjct: 345 HVPQLETFSLSQTFVDDLSILLISTMMPCVKALD-LGMTSIREEQAEP----SLAALQSL 399
Query: 261 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV 320
L+ L+LE + D L LS+ L HLSLR+ SLTD +LH LSSL L +L +RDAV
Sbjct: 400 TSLKTLSLEHPYLGDTALSALSSLTGLTHLSLRSTSLTDSTLHHLSSLPNLVSLGVRDAV 459
Query: 321 LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIG--- 377
LT++GL F+PP+ L+ LDL G WLLT+D I CK +P I+V HE DQ
Sbjct: 460 LTSNGLEKFRPPKRLRTLDLKGCWLLTKDDIAGLCKRYPHIKVRHEHDDSSSLDQNQFLP 519
Query: 378 -SNGPSPSRTSLRASLVKQKQDPMPMSHSFLDQRLKYSREELLELQYSSLSLARP 431
S+ P R S ++ + + + SFLDQR+KY+REEL+ LQ S LS P
Sbjct: 520 RSSTPQSFGKVPRRSNNQRPESSVAVPRSFLDQRVKYNREELVALQNSPLSQLLP 574
>gi|186701224|gb|ACC91251.1| leucine-rich repeat family protein [Arabidopsis halleri]
Length = 600
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 174/343 (50%), Positives = 238/343 (69%), Gaps = 21/343 (6%)
Query: 6 ESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKH 65
ES LVRLCIE AC+SG +V++WR QRRSLERLP HLAD+LLR L+ +RL+FPSLLE FKH
Sbjct: 2 ESALVRLCIEEACKSGYAVERWRLQRRSLERLPPHLADALLRRLLHKRLLFPSLLEGFKH 61
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
+ E I+LRGE+S++AEWMAY+G F L SLN++DC+R+ SS LW +TG+T L ELDLSRC
Sbjct: 62 SVENIDLRGESSINAEWMAYIGGFVNLISLNLSDCQRINSSTLWPITGLTSLTELDLSRC 121
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
KVTDAG+KHL S+S L+KLW+S+TG+T GI+LL+SL+ LS+LDLGGLPVTD L +LQ
Sbjct: 122 WKVTDAGIKHLQSVSNLKKLWISQTGVTKVGISLLASLKKLSLLDLGGLPVTDHNLIALQ 181
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQV- 244
LTKLEYLD+WGS V+N+GA + F LSFLNL+WT VT+ PNI LECL+++ V
Sbjct: 182 ALTKLEYLDIWGSNVTNQGAISILQFSNLSFLNLSWTSVTQTPNIPHLECLHMNMCTIVS 241
Query: 245 -----------------GAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 287
GA + N + + L++ +T + + + L T L
Sbjct: 242 EPKTHSSLASLKKLVLSGANFSAETEALSFTNKSSITYLDVSKTSLQNFSF--LETMINL 299
Query: 288 IHLSLRNASLTDVSLHQLSSLSK-LTNLSIRDAVLTNSGLGSF 329
HL L + + D S+ ++ + + L NL++ + +T++G+G+
Sbjct: 300 EHLDLSSTAFGDDSVGFVACVGENLRNLNVSETKITSAGVGNL 342
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 115/330 (34%), Positives = 169/330 (51%), Gaps = 23/330 (6%)
Query: 110 ALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSL-QNLSV 168
+ T + + LD+S K + L ++ LE L LS T D + ++ + +NL
Sbjct: 270 SFTNKSSITYLDVS---KTSLQNFSFLETMINLEHLDLSSTAFGDDSVGFVACVGENLRN 326
Query: 169 LDLGGLPVTDLVLRSLQV-LTKLEYLDLWGSQVSNRGAAVLK-MFPRLSFLNLAWTGVTK 226
L++ +T + +L + +LE L + V + ++ M P + L+L T +
Sbjct: 327 LNVSETKITSAGVGNLAGHVPQLETFSLSQTFVDDLSILLISTMMPCVKALDLGMTSIRG 386
Query: 227 LPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 286
+QQ E SL ALQ+L L+ L+LE + D L LS+
Sbjct: 387 F------------ILQQSPQEEQAEPSLAALQSLTSLKTLSLEHPYLGDTALSALSSLTG 434
Query: 287 LIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLL 346
L HLSLR+ SLTD +LH LSSL L +L +RDAVLT++GL F+PP+ L+ LDL G WLL
Sbjct: 435 LTHLSLRSTSLTDSTLHHLSSLPNLVSLGVRDAVLTSNGLEKFRPPKRLRTLDLKGCWLL 494
Query: 347 TEDAILQFCKMHPRIEVWHE--LSVICPSDQIGSNGPSPSRTSLRASLVKQKQDP---MP 401
T+D I CK +P I+V HE +S +Q+ +P S + Q P +
Sbjct: 495 TKDDIAGLCKRYPHIKVRHEHDISSSLDQNQLLPRSSTPQTQSFGKLPRRNNQRPESYVA 554
Query: 402 MSHSFLDQRLKYSREELLELQYSSLSLARP 431
+ SFLDQR+KY+REEL+ LQ S LS P
Sbjct: 555 VPRSFLDQRVKYNREELVALQKSPLSQLLP 584
>gi|218196286|gb|EEC78713.1| hypothetical protein OsI_18882 [Oryza sativa Indica Group]
Length = 601
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 180/378 (47%), Positives = 242/378 (64%), Gaps = 43/378 (11%)
Query: 6 ESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKH 65
E+ LV CI+AA +V+ WRRQRRSLERLPA LAD+LLR L RRL+FPSLLEVF+H
Sbjct: 11 ETPLVDRCIDAAAGGAATVEAWRRQRRSLERLPAQLADALLRRLAARRLLFPSLLEVFQH 70
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
+ E I+L G +VDAEW+AYLGAFRYLR L +ADC+ V SSA+WAL+GM+ LKELDLSRC
Sbjct: 71 SVEEIDLSGHIAVDAEWLAYLGAFRYLRVLKLADCKNVNSSAVWALSGMSTLKELDLSRC 130
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
K++DAG+KH+ SI +LEKL +S+TGLT +G+ +SSL NL +LDLGG+ TD LRSLQ
Sbjct: 131 SKISDAGIKHIASIESLEKLHVSQTGLTDNGVMAISSLINLRLLDLGGVRFTDKALRSLQ 190
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLS--FIQQ 243
VLT+LE+LD+WGS+++N GA+VL F LSFLN++WT VT LP + +L CLN+S I
Sbjct: 191 VLTQLEHLDIWGSEITNEGASVLIAFTSLSFLNISWTRVTCLPILLTLRCLNMSNCTIHS 250
Query: 244 VG--------------------AETDLVLS-------------------LTALQNLNHLE 264
+ D V S L L N+ +LE
Sbjct: 251 ICNGEFQVLIHLEKLVISAASFGNIDEVFSSILPSSLTYLDMSSCSSSNLYFLGNMRNLE 310
Query: 265 RLNLEQTQ-VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLS-SLSKLTNLSIRDAVLT 322
L+L ++ +SDA + + L+ LSL N+ +T +L L+ ++ LT LS+ +
Sbjct: 311 HLDLSYSRIISDAIEYIANIGMNLMFLSLSNSEVTSQALCVLAGTVPSLTTLSLAHTKID 370
Query: 323 NSGLGSFKPPRSLKLLDL 340
+S L SL++L+L
Sbjct: 371 DSALLYISMMPSLRILNL 388
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 106/317 (33%), Positives = 169/317 (53%), Gaps = 25/317 (7%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSL-QNLSVLDLGGLP 175
L LD+S C + + + L ++ LE L LS + + +D I ++++ NL L L
Sbjct: 287 LTYLDMSSC---SSSNLYFLGNMRNLEHLDLSYSRIISDAIEYIANIGMNLMFLSLSNSE 343
Query: 176 VTDLVLRSLQ-VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLE 234
VT L L + L L L +++ + + M P L LNL+ T + +S++
Sbjct: 344 VTSQALCVLAGTVPSLTTLSLAHTKIDDSALLYISMMPSLRILNLSRTCIKGFMMENSVK 403
Query: 235 CLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 294
VLSL+AL+ L +LE LNL TQ+ D + PL++F+ L +L L++
Sbjct: 404 ----------------VLSLSALEELKYLESLNLNNTQLMDDVIPPLASFRALKYLFLKS 447
Query: 295 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQF 354
L+D +LH LSS S L +L +L+ +GL F PP +L++LDL G W+LT DAI F
Sbjct: 448 DFLSDPALHALSSASNLIHLGFCGNILSTTGLRKFVPPATLRMLDLSGCWILTGDAISAF 507
Query: 355 CKMHPRIEVWHELSVICPSDQIGS---NGPSPSRTSLRASLVKQKQDPMPMSH-SFLDQR 410
C HP IEV HEL ++ G+ + S ++A + K P ++ F+D++
Sbjct: 508 CTCHPVIEVRHELIQELQANYGGTSHLHKSSRQPQQVKAKVAKSLAGPSRLADICFVDEK 567
Query: 411 LKYSREELLELQYSSLS 427
+KYS+EE++ELQ+ + S
Sbjct: 568 IKYSKEEMMELQHQAKS 584
>gi|242089917|ref|XP_002440791.1| hypothetical protein SORBIDRAFT_09g006650 [Sorghum bicolor]
gi|241946076|gb|EES19221.1| hypothetical protein SORBIDRAFT_09g006650 [Sorghum bicolor]
Length = 608
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 159/340 (46%), Positives = 223/340 (65%), Gaps = 22/340 (6%)
Query: 7 SELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHN 66
+ LV CI+AA + +V+ WRRQRRSLERLPA LAD+L R L RRL+FPSLLEVF +
Sbjct: 14 ARLVDRCIDAAARGPATVEAWRRQRRSLERLPAPLADALFRRLAARRLLFPSLLEVFSRS 73
Query: 67 AEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCV 126
E ++L G SVDAEW+AYLG+FR+LR L +ADC+ + + A+W+L+GM LK+LDLSRC
Sbjct: 74 VEEVDLSGFLSVDAEWLAYLGSFRFLRVLTLADCKNIDNDAVWSLSGMNTLKDLDLSRCK 133
Query: 127 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 186
K++DAG+KH+++I +LEKL LSET LT +G+ L+SSL NLS LDLGG+ +TD L+SLQV
Sbjct: 134 KISDAGIKHIVTIESLEKLHLSETELTNNGVMLISSLTNLSFLDLGGILMTDKSLQSLQV 193
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSF--IQQV 244
LT+LE+LD+WGS+ +N GA+ LK F RL FLNLA T V L + CLN+S I +
Sbjct: 194 LTRLEHLDIWGSETTNEGASTLKSFARLIFLNLALTRVNHLSIPPTTRCLNMSNCEIHSI 253
Query: 245 GAET--------DLVLSLTALQNLNH---------LERLNLEQTQVSDATLFPLSTFKEL 287
E + ++S N++ L L+L ++S+ + L K L
Sbjct: 254 CDEDSEVPVPLENFIVSAATFGNIDKVFSSIQASSLTHLDLSSCKLSNLSF--LEKMKNL 311
Query: 288 IHLSLRNASLTDVSLHQLSSL-SKLTNLSIRDAVLTNSGL 326
HL L +TD ++ ++ L + L LS+++ +T+ L
Sbjct: 312 EHLDLSYNIITDGAIEHIAKLGTNLQYLSLKNTGITSQAL 351
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 108/348 (31%), Positives = 176/348 (50%), Gaps = 51/348 (14%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIST-LEKLWLSET 150
L L+++ C+ S L L M L+ LDLS + +TD ++H+ + T L+ L L T
Sbjct: 289 LTHLDLSSCKL---SNLSFLEKMKNLEHLDLSYNI-ITDGAIEHIAKLGTNLQYLSLKNT 344
Query: 151 GLTADGIALLS-SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
G+T+ + +L+ ++ NL+ L L + D L + ++ L +DL SQ S +G A+
Sbjct: 345 GITSQALCILAGTVPNLTSLSLANTKIDDSALAYIGMIPLLRTIDL--SQTSIKGCALEN 402
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
F +L +T ++A ++L +LE LNLE
Sbjct: 403 KF----YLMAGFT------------------------------HMSAFEHLKYLESLNLE 428
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 329
T +S + PL++ L +L L++ L+D +LH LS+ S L +L +L++SGL F
Sbjct: 429 DTPLSAEVIPPLASLAALKYLYLKSDFLSDPALHALSAASNLIHLGFCGNILSSSGLLQF 488
Query: 330 KPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQI-GSNGPSPSR--- 385
PP +L +LDL G W+LT +AI F K HP IE+ HEL ++ + GS P R
Sbjct: 489 VPPTTLCVLDLSGCWILTGEAISTFRKRHPTIELRHELMEEVQANFVGGSQFRKPRRRQS 548
Query: 386 TSLRASLVKQKQDPMPMSH-SFLDQRLKYSREELLELQYSSLSLARPD 432
+++ + P + F+D+R+KYS+EE +ELQ L +P+
Sbjct: 549 PHVKSEVGNSFAGPSRLRDICFVDERIKYSKEEFMELQ----GLVKPN 592
>gi|42567079|ref|NP_194115.3| leucine-rich repeat-containing protein [Arabidopsis thaliana]
gi|20466546|gb|AAM20590.1| unknown protein [Arabidopsis thaliana]
gi|22136448|gb|AAM91302.1| unknown protein [Arabidopsis thaliana]
gi|51971383|dbj|BAD44356.1| putative protein [Arabidopsis thaliana]
gi|332659411|gb|AEE84811.1| leucine-rich repeat-containing protein [Arabidopsis thaliana]
Length = 597
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 171/343 (49%), Positives = 237/343 (69%), Gaps = 21/343 (6%)
Query: 6 ESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKH 65
ES LVRLC++ AC+SG++V++WR QRRSLE LP HLAD+LLR L+++RL+FPSLLE FK+
Sbjct: 2 ESPLVRLCLKEACKSGDAVERWRLQRRSLESLPPHLADALLRRLLKKRLLFPSLLEGFKY 61
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
+ E I+LRG++SV+AEWMAY+G F L +LN++DC+R+ SS LW +TG+T L ELDLSRC
Sbjct: 62 SVENIDLRGKSSVNAEWMAYIGGFVNLITLNLSDCQRINSSTLWPITGLTSLTELDLSRC 121
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
KVTDAGMKHL S+ L+KLW+S+TG+T GI+LL+SL+ LS+LDLGGLPVTD L SLQ
Sbjct: 122 FKVTDAGMKHLQSVVNLKKLWISQTGVTEVGISLLASLKKLSLLDLGGLPVTDQNLISLQ 181
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQV- 244
LTKLEYLD+WGS V+N+GA + F LSFLNL+WT +T+ PNI LECL+++ V
Sbjct: 182 ALTKLEYLDIWGSNVTNQGAVSILKFSNLSFLNLSWTSITQTPNIPHLECLHMNTCTIVS 241
Query: 245 -----------------GAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 287
GA + N + + L++ +T + + + L T L
Sbjct: 242 EPKTHSSLASLKKLVLSGANFSAETESLSFTNKSCITYLDVSKTSLKNFSF--LETMFNL 299
Query: 288 IHLSLRNASLTDVSLHQLSSLSK-LTNLSIRDAVLTNSGLGSF 329
HL L + + D S+ ++ + + L NL++ D +T SG+G+
Sbjct: 300 EHLDLSSTAFGDDSVGFVACVGENLKNLNVSDTQITPSGVGNL 342
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 120/341 (35%), Positives = 167/341 (48%), Gaps = 48/341 (14%)
Query: 110 ALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLS----SLQN 165
+ T +C+ LD+S K + L ++ LE L LS T D + ++ +L+N
Sbjct: 270 SFTNKSCITYLDVS---KTSLKNFSFLETMFNLEHLDLSSTAFGDDSVGFVACVGENLKN 326
Query: 166 LSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV- 224
L+V D P S V N V P+L L+++ T V
Sbjct: 327 LNVSDTQITP----------------------SGVGNLAGHV----PQLETLSMSQTFVD 360
Query: 225 --------TKLPNISSLEC-LN--LSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQV 273
T +P I +L+ +N L F + + + SL ALQ+L LE L+LE +
Sbjct: 361 DLSILLISTTMPCIKALDLGMNSTLGFYYLISPQEEKEKSLAALQSLTSLETLSLEHPYL 420
Query: 274 SDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPR 333
D L LS+ L HLSL + SLTD +LH LSSL L +L +RD VLT++GL F+PP
Sbjct: 421 GDKALSGLSSLTGLTHLSLTSTSLTDSTLHHLSSLPNLVSLGVRDGVLTSNGLEKFRPPN 480
Query: 334 SLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSLRASLV 393
L+ LDL G WLLT+D I CK +P I+V HE + DQ S + S
Sbjct: 481 RLRTLDLQGCWLLTKDDIAGLCKRYPHIKVRHEHADSSSLDQNQLLPRSSTPQSFGKVAR 540
Query: 394 KQKQDP---MPMSHSFLDQRLKYSREELLELQYSSLSLARP 431
+ Q P + + SFLDQR+KY+REEL+ LQ S LS P
Sbjct: 541 RNNQRPESSVAVPRSFLDQRVKYNREELVALQNSPLSQLLP 581
>gi|326513166|dbj|BAK06823.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 627
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 166/380 (43%), Positives = 252/380 (66%), Gaps = 27/380 (7%)
Query: 6 ESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKH 65
E L+ CI+AA + SV+ WRRQRRSLERLP+ LAD+LLR L RRL+FPSLLEVF+H
Sbjct: 36 EQRLLDRCIDAAARCPASVEAWRRQRRSLERLPSQLADALLRRLAARRLLFPSLLEVFRH 95
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
+ + I+L G+ +VDAEW+AYLG+FRYL L +ADC++V SA+W L+GM+ LKELDLSRC
Sbjct: 96 SVQEIDLSGDIAVDAEWLAYLGSFRYLGVLKLADCKKVDHSAIWPLSGMSMLKELDLSRC 155
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
K+TDAG+KH++SI +LEKL LSETGLT +G+ L+S+L+ L +LDLGG+ +TD LRSLQ
Sbjct: 156 SKITDAGIKHIVSIDSLEKLHLSETGLTDNGVMLISALKGLILLDLGGIHMTDKALRSLQ 215
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLS---FIQ 242
VLT+LE+LD+WGS++++ GA++L+ F L FLN++WT VT+LP++ +++ LN+S
Sbjct: 216 VLTQLEHLDVWGSEITDEGASILEAFTGLRFLNVSWTHVTRLPHLPNMKYLNMSNCTIYS 275
Query: 243 QVGAETDLVLSL----TALQNLNHLERL----------NLEQTQVSDATLFPLSTFKELI 288
G ++++ + L + + ++ + L+ + S + L+ L K L
Sbjct: 276 ICGGDSEVHIPLQKFTASAASFGDIDEVFSSIVASSFSFLDMSGCSLSNLYGLQKMKSLE 335
Query: 289 HLSLRNASLTDVSLHQLSSLS-KLTNLSIRDAVLTNSGL----GSFKPPRSLKLLDLHGG 343
HL + +TD ++ ++++ KL LS+++ +T+ L G+ SL L
Sbjct: 336 HLDISLNRVTDDAVEYVANIGMKLRYLSLKNTGITSQALCILAGTVPNLASLSL-----A 390
Query: 344 WLLTEDAILQFCKMHPRIEV 363
+ +D+ L + M P + V
Sbjct: 391 YTKIDDSALVYISMMPSLRV 410
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 127/396 (32%), Positives = 198/396 (50%), Gaps = 52/396 (13%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
E +++ G D E + L AF LR LNV + + + L + +K L++S C
Sbjct: 221 EHLDVWGSEITD-EGASILEAFTGLRFLNV------SWTHVTRLPHLPNMKYLNMSNCTI 273
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSL--QNLSVLDLGGLPVTDLVLRSLQ 185
+ G + I L+K S D + SS+ + S LD+ G +++L LQ
Sbjct: 274 YSICGGDSEVHI-PLQKFTASAASF-GDIDEVFSSIVASSFSFLDMSGCSLSNLY--GLQ 329
Query: 186 VLTKLEYLDLWGSQVSNRGAA-VLKMFPRLSFLNLAWTGVTK---------LPNISSLE- 234
+ LE+LD+ ++V++ V + +L +L+L TG+T +PN++SL
Sbjct: 330 KMKSLEHLDISLNRVTDDAVEYVANIGMKLRYLSLKNTGITSQALCILAGTVPNLASLSL 389
Query: 235 --------------------CLNLSF-----IQQVGAETDLVLSLTALQNLNHLERLNLE 269
++LS +V A ++ + SL L++L +LE LNLE
Sbjct: 390 AYTKIDDSALVYISMMPSLRVIDLSHTTIKGFTRVEANSEKIPSLPLLEHLIYLESLNLE 449
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 329
+SD + P+++F+ L +L L++ L+D LH LSS S L +L +VL+NSGL F
Sbjct: 450 DAPLSDEVIPPMTSFRALKYLYLKSDFLSDPGLHALSSASNLIHLGFCGSVLSNSGLLEF 509
Query: 330 KPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSLR 389
PP L +LDL G W+LT DAI F + HP IEV HEL+ ++ G++ SR R
Sbjct: 510 VPPAQLHVLDLSGCWILTGDAISTFRRHHPSIEVRHELTQELQPNRGGTSQVHKSRQLPR 569
Query: 390 ASLVKQKQDPMPMSHS---FLDQRLKYSREELLELQ 422
A HS F+DQR+KYSREE++E+Q
Sbjct: 570 AKTKVVNSSADSRRHSGIFFVDQRIKYSREEMMEIQ 605
>gi|413949465|gb|AFW82114.1| hypothetical protein ZEAMMB73_510951 [Zea mays]
Length = 606
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 161/340 (47%), Positives = 222/340 (65%), Gaps = 22/340 (6%)
Query: 7 SELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHN 66
S LV CI+AA + +V+ WRRQRRSLERLPA LAD+LLR L RRL+FPSLLEVF +
Sbjct: 14 SRLVDRCIDAAARGPATVEAWRRQRRSLERLPAPLADALLRRLAARRLLFPSLLEVFGRS 73
Query: 67 AEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCV 126
E ++L G SV++EW+AYLG+FRYLR L +ADC+ + + A+W+L+GM LKELDLSRC
Sbjct: 74 VEEVDLSGFLSVNSEWLAYLGSFRYLRVLKLADCKNINNDAVWSLSGMNTLKELDLSRCK 133
Query: 127 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 186
K++DAG+KH+++I +LEKL LSET LT +G+ L+SSL NLS LDLGG+ +TD L+SLQV
Sbjct: 134 KISDAGIKHIVTIESLEKLHLSETELTDNGVMLISSLTNLSFLDLGGILMTDKTLQSLQV 193
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKL---PNISSLECLNLSF--I 241
LTKLE+LD+WGS+ +N GA+ LK F RL LNLA T V L P S L N I
Sbjct: 194 LTKLEHLDIWGSETTNEGASALKSFARLLSLNLALTRVNHLSIPPTTSYLNMSNCEIHSI 253
Query: 242 QQVGAET-----DLVLSLTALQNLNH---------LERLNLEQTQVSDATLFPLSTFKEL 287
V +E + ++S N++ L L+L ++S+ + L K L
Sbjct: 254 CDVDSEVPVPLENFIVSAATFGNIDKVFSSIQASSLIHLDLSSCKLSNLSF--LEKMKNL 311
Query: 288 IHLSLRNASLTDVSLHQLSSL-SKLTNLSIRDAVLTNSGL 326
HL L +TD ++ ++ + + L LS+++ +T+ L
Sbjct: 312 EHLDLSYNIITDGAIEHIAKIGTNLQYLSLKNTGITSQAL 351
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 114/347 (32%), Positives = 177/347 (51%), Gaps = 57/347 (16%)
Query: 95 LNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIST-LEKLWLSETGLT 153
L+++ C+ S L L M L+ LDLS + +TD ++H+ I T L+ L L TG+T
Sbjct: 292 LDLSSCKL---SNLSFLEKMKNLEHLDLSYNI-ITDGAIEHIAKIGTNLQYLSLKNTGIT 347
Query: 154 ADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPR 213
+ + +L+ G +P L L L +++ + A + M P
Sbjct: 348 SQALCILA----------GTVP-------------NLTSLSLANTKIDDSALAYIGMIPL 384
Query: 214 LSFLNLAWTGVTKLPNISSLECLNLSFIQ-QVGAETDLVLSLTALQNLNHLERLNLEQTQ 272
L ++L+ T + FI +V +E +LS++A ++L +LE LNLE T
Sbjct: 385 LRTIDLSQTSIK-------------GFIHTEVNSEK--LLSMSAFEHLKYLESLNLEDTP 429
Query: 273 VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPP 332
+S + PL++F L +L L++ L+D +LH LS+ S L +L R +L++ GL F PP
Sbjct: 430 LSAEVIPPLASFATLKYLYLKSDFLSDPALHALSAASNLIHLGFRGNILSSFGLLQFVPP 489
Query: 333 RSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQI-GSNGPSPSRTSLRAS 391
+L +LDL G W+LT DAI F K HP IE+ HEL + + GS P R R+
Sbjct: 490 VTLCVLDLSGCWILTGDAISTFRKRHPTIELRHELLHEVEENFVGGSQFRKPRRR--RSP 547
Query: 392 LVKQKQDPMPMSHS------FLDQRLKYSREELLELQYSSLSLARPD 432
VK + S F+D+R+KYS+EE +ELQ LA+P+
Sbjct: 548 HVKAEVGNSFAGSSRLHDIRFVDERIKYSKEEFVELQ----GLAKPN 590
>gi|224058291|ref|XP_002299477.1| predicted protein [Populus trichocarpa]
gi|222846735|gb|EEE84282.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 131/182 (71%), Positives = 156/182 (85%)
Query: 6 ESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKH 65
ES LVRLCIEAAC+S ESV+KWR+QRR+L +P+ LAD+LLR L RRL+FPSLLEVFK
Sbjct: 1 ESRLVRLCIEAACESRESVEKWRKQRRTLNSMPSPLADALLRRLFLRRLLFPSLLEVFKR 60
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
+ E ++L+GEN+VDAEWMAYLGAFRYLRSLN+ADC R+ +SALW+L GMT LKE+D+SRC
Sbjct: 61 SVEVVDLKGENNVDAEWMAYLGAFRYLRSLNLADCHRINNSALWSLVGMTSLKEVDISRC 120
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
KVTDAG++HL+SISTL+ L +SETG+TADGI LLSSL L VLDLG LPVTD L SLQ
Sbjct: 121 AKVTDAGIRHLVSISTLQILRISETGVTADGIKLLSSLTTLFVLDLGDLPVTDTALSSLQ 180
Query: 186 VL 187
VL
Sbjct: 181 VL 182
>gi|222630606|gb|EEE62738.1| hypothetical protein OsJ_17541 [Oryza sativa Japonica Group]
Length = 973
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 150/390 (38%), Positives = 225/390 (57%), Gaps = 62/390 (15%)
Query: 60 LEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKE 119
L VF+H+ E I+L G +VDAEW+AYLGAFRYLR L +ADC+ V SSA+WAL+GM LKE
Sbjct: 607 LRVFQHSVEEIDLSGHIAVDAEWLAYLGAFRYLRVLKLADCKNVNSSAVWALSGMRTLKE 666
Query: 120 LDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDL 179
LDLSRC K++DAG+KH+ SI +LEKL +S+TGLT +G+ +SSL NL +LDLGG+ TD
Sbjct: 667 LDLSRCSKISDAGIKHIASIESLEKLHVSQTGLTDNGVMAISSLINLRLLDLGGVRFTDK 726
Query: 180 VLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLS 239
LRSLQVLT+LE+LD+WGS+++N GA+VL F LSFLN++WT VT LP + +L CLN+S
Sbjct: 727 ALRSLQVLTQLEHLDIWGSEITNEGASVLIAFTSLSFLNISWTRVTCLPILPTLRCLNMS 786
Query: 240 F----------IQQVGAETDLVLSLTALQNLNHL-------ERLNLEQTQVSDATLFPLS 282
Q + L++S + N++ + L+ + S + L+ L
Sbjct: 787 NCTIHSICNGEFQVLIHLEKLIISAASFGNIDEVFSSILPSSLTYLDMSSCSSSNLYFLG 846
Query: 283 TFKELIHLSLRNASLTDVSLHQLSSLS-KLTNLSIRDAVLTNSGL----GSFKPPRSLKL 337
+ L HL L + + ++ ++++ L LS+ ++ +T+ L G+ +L L
Sbjct: 847 NMRNLEHLDLSYSRIISDAIEYIANIGMNLKFLSLSNSEVTSQALCVLAGTVPSLTTLSL 906
Query: 338 LDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSLRASLVKQKQ 397
+D+ L + M P + + + SRT ++
Sbjct: 907 AHTK-----IDDSALLYISMMPSLRILNL-----------------SRTCIK-------- 936
Query: 398 DPMPMSHSFLDQRLKYSREELLELQYSSLS 427
D+R+KYS+EE++ELQ+ + S
Sbjct: 937 ----------DERIKYSKEEMMELQHQAKS 956
>gi|302802011|ref|XP_002982761.1| hypothetical protein SELMODRAFT_52320 [Selaginella moellendorffii]
gi|300149351|gb|EFJ16006.1| hypothetical protein SELMODRAFT_52320 [Selaginella moellendorffii]
Length = 516
Score = 221 bits (562), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 146/340 (42%), Positives = 209/340 (61%), Gaps = 25/340 (7%)
Query: 9 LVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNAE 68
LV LC+EAA +S +SV+ WRRQRR+LE LPAHLA+SLL L+ + L P LLE+F+ + E
Sbjct: 1 LVDLCLEAASRSADSVRSWRRQRRTLEILPAHLAESLLHQLLVKNLFSPPLLELFQLSVE 60
Query: 69 AIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTG--MTCLKELDLSRCV 126
++L GE SVDAEWMAY+G FR+LR L V C+ + +SA+W L+G + + RC
Sbjct: 61 ELDLNGELSVDAEWMAYIGGFRHLRVLKVESCKALNNSAIWHLSGKLHFSFERKLIDRCS 120
Query: 127 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 186
K+T+ G++H+L++ L+ L LSETG+ GI L+ L+NLS LDLGGLPVTD + SL V
Sbjct: 121 KITNQGLEHILTLGKLKHLGLSETGIGEQGIGKLAVLRNLSHLDLGGLPVTDSHVSSLLV 180
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSF-----I 241
L L L LWGS ++N GA +L+ FPRL LNLAWT V+ +P++ + LNLS +
Sbjct: 181 LQLLIDLQLWGSSITNEGANMLRGFPRLEILNLAWTKVSVVPSMPRVSQLNLSHCVVLSV 240
Query: 242 QQVGAETD-LVLSLTALQN---------LNHLERLNLEQTQVSDATLFPLSTFKELIHLS 291
+ G+ D L LS +Q+ L L L L T ++ T L + K ++ L
Sbjct: 241 SEEGSALDQLRLSGATIQDPLRVLHSHSLPELSVLELSATNLAALTF--LGSLKRVVKLD 298
Query: 292 LRNASLTDVSLHQLSSLSK----LTNLSIRDAVLTNSGLG 327
L +S+ VS ++ L+K L +L + D + + G+
Sbjct: 299 L--SSMPSVSSDTMNLLAKCARNLKHLDLSDTRVGSEGVA 336
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 138/269 (51%), Gaps = 34/269 (12%)
Query: 103 VTSSALWALTGMTCLK---ELDLSRCVKVTDAGMKHLLSIS-TLEKLWLSETGLTADGIA 158
++++ L ALT + LK +LDLS V+ M L + L+ L LS+T + ++G+A
Sbjct: 277 LSATNLAALTFLGSLKRVVKLDLSSMPSVSSDTMNLLAKCARNLKHLDLSDTRVGSEGVA 336
Query: 159 LLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN 218
+L+ G +P LE+L L G+ +++ L + P L ++
Sbjct: 337 VLT----------GHVPA-------------LEHLSLRGTSITDSVFGYLGLMPLLIDID 373
Query: 219 LAWTGVTKLPNISSLECLNLSFIQQVGAETDLVL-SLTALQNLNHLERLNLEQTQVSDAT 277
L+ T +T +P + + A D S+ LQ L++L RL+L +T+ SD +
Sbjct: 374 LSNTSLTGMP------VFEFTKVYYTCAPVDSSFWSVLHLQQLHNLRRLDLRRTRFSDKS 427
Query: 278 LFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKL 337
L+ L HL L LTD SLH+LS+L L +L+ + VLT++GL S KPP L+
Sbjct: 428 CKRLACLVRLTHLLLCAEFLTDASLHELSALPNLRSLAFQGTVLTDAGLRSLKPPPPLEE 487
Query: 338 LDLHGGWLLTEDAILQFCKMHPRIEVWHE 366
LDL WLLTE +LQFC + + V H+
Sbjct: 488 LDLTDCWLLTEGCLLQFCDYYRSVTVKHD 516
>gi|224058283|ref|XP_002299476.1| predicted protein [Populus trichocarpa]
gi|222846734|gb|EEE84281.1| predicted protein [Populus trichocarpa]
Length = 291
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 140/320 (43%), Positives = 188/320 (58%), Gaps = 39/320 (12%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSI-STLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP 175
++ LDLS + + D ++ + SI + L L L +T +T+ G+A+L +G +P
Sbjct: 1 MEYLDLSSSM-IGDDSIEAVASIGAILRNLNLGKTRVTSAGVAIL----------VGHVP 49
Query: 176 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLEC 235
KLE L L + V + + + M P L ++L T +
Sbjct: 50 -------------KLENLSLSHTLVDDLAMSYIGMMPSLKLVDLNNTIIN---------- 86
Query: 236 LNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 295
FI Q GA +L+ SLTAL +L LE LNLE + DA + PLS F+EL LSL++
Sbjct: 87 ---GFIHQDGAGPNLISSLTALHSLKGLESLNLECANIKDAAVDPLSNFQELRLLSLKSP 143
Query: 296 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFC 355
SLTD+SL+ LSSL K+ NL IRDAVLT+SGL SF+PP +L++LDL G WLLTEDAIL F
Sbjct: 144 SLTDISLYHLSSLPKIRNLGIRDAVLTDSGLFSFRPPATLEMLDLRGCWLLTEDAILSFR 203
Query: 356 KMHPRIEVWHELSVICPSDQIGSNGPSPSRTSLRASLVKQKQDPMPMSHSFLDQRLKYSR 415
K HP IE+ HE V+ SDQ + +P RT LR V QKQ+ + +S F+DQRLKY+R
Sbjct: 204 KRHPLIELRHE-HVVSTSDQTARHRLTPPRTFLRPPQVNQKQEKLIVSQYFIDQRLKYTR 262
Query: 416 EELLELQYSSLSLARPDDSS 435
EELL LQ+ S SL P D S
Sbjct: 263 EELLALQFQSSSLGSPFDKS 282
>gi|308044417|ref|NP_001183765.1| hypothetical protein [Zea mays]
gi|238014428|gb|ACR38249.1| unknown [Zea mays]
gi|413949466|gb|AFW82115.1| hypothetical protein ZEAMMB73_510951 [Zea mays]
Length = 547
Score = 210 bits (535), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 182/526 (34%), Positives = 270/526 (51%), Gaps = 108/526 (20%)
Query: 7 SELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHN 66
S LV CI+AA + +V+ WRRQRRSLERLPA LAD+LLR L RRL+FPSLLEVF +
Sbjct: 14 SRLVDRCIDAAARGPATVEAWRRQRRSLERLPAPLADALLRRLAARRLLFPSLLEVFGRS 73
Query: 67 AEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTG------------- 113
E ++L G SV++EW+AYLG+FRYLR L +ADC+ + + A+W+L+G
Sbjct: 74 VEEVDLSGFLSVNSEWLAYLGSFRYLRVLKLADCKNINNDAVWSLSGGILMTDKTLQSLQ 133
Query: 114 -MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLG 172
+T L+ LD+ + T+ G L S + L L L+ T + I +S N+S ++
Sbjct: 134 VLTKLEHLDIWGS-ETTNEGASALKSFARLLSLNLALTRVNHLSIPPTTSYLNMSNCEIH 192
Query: 173 GL-------PV--------------TDLVLRSLQV---------------------LTKL 190
+ PV D V S+Q + L
Sbjct: 193 SICDVDSEVPVPLENFIVSAATFGNIDKVFSSIQASSLIHLDLSSCKLSNLSFLEKMKNL 252
Query: 191 EYLDLWGSQVSNRGAA--VLKMFPRLSFLNLAWTGVTK---------LPNISSLECLN-- 237
E+LDL + +++ GA + K+ L +L+L TG+T +PN++SL N
Sbjct: 253 EHLDLSYNIITD-GAIEHIAKIGTNLQYLSLKNTGITSQALCILAGTVPNLTSLSLANTK 311
Query: 238 -----LSFIQQVG-------------------AETDLVLSLTALQNLNHLERLNLEQTQV 273
L++I + ++ +LS++A ++L +LE LNLE T +
Sbjct: 312 IDDSALAYIGMIPLLRTIDLSQTSIKGFIHTEVNSEKLLSMSAFEHLKYLESLNLEDTPL 371
Query: 274 SDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPR 333
S + PL++F L +L L++ L+D +LH LS+ S L +L R +L++ GL F PP
Sbjct: 372 SAEVIPPLASFATLKYLYLKSDFLSDPALHALSAASNLIHLGFRGNILSSFGLLQFVPPV 431
Query: 334 SLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQI-GSNGPSPSRTSLRASL 392
+L +LDL G W+LT DAI F K HP IE+ HEL + + GS P R R+
Sbjct: 432 TLCVLDLSGCWILTGDAISTFRKRHPTIELRHELLHEVEENFVGGSQFRKPRRR--RSPH 489
Query: 393 VKQKQDPMPMSHS------FLDQRLKYSREELLELQYSSLSLARPD 432
VK + S F+D+R+KYS+EE +ELQ LA+P+
Sbjct: 490 VKAEVGNSFAGSSRLHDIRFVDERIKYSKEEFVELQ----GLAKPN 531
>gi|22136662|gb|AAM91650.1| unknown protein [Arabidopsis thaliana]
Length = 192
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 120/185 (64%), Positives = 155/185 (83%)
Query: 6 ESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKH 65
ES LVRLC++ AC+SG++V++WR QRRSLE LP HLAD+LLR L+++RL+FPSLLE FK+
Sbjct: 2 ESPLVRLCLKEACKSGDAVERWRLQRRSLESLPPHLADALLRRLLKKRLLFPSLLEGFKY 61
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
+ E I+LRG++SV+AEWMAY+G F L +LN++DC+R+ SS LW +TG+T L ELDLSRC
Sbjct: 62 SVENIDLRGKSSVNAEWMAYIGGFVNLITLNLSDCQRINSSTLWPITGLTSLTELDLSRC 121
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
KVTDAGMKHL S+ L+KLW+S+TG+T GI+LL+SL+ LS+LDLGGLPVTD L SLQ
Sbjct: 122 FKVTDAGMKHLQSVVNLKKLWISQTGVTEVGISLLASLKKLSLLDLGGLPVTDQNLISLQ 181
Query: 186 VLTKL 190
VL L
Sbjct: 182 VLPVL 186
>gi|168052598|ref|XP_001778727.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669846|gb|EDQ56425.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 643
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 107/220 (48%), Positives = 148/220 (67%)
Query: 9 LVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNAE 68
L+ LCI+AA + V+ WR++RR+ E LP+ LA L L++ L+ +L+ +F+ N +
Sbjct: 14 LLELCIKAATRDKSCVKAWRQKRRTFEMLPSELAHELFNSLLQSHLLSATLIGLFQSNLQ 73
Query: 69 AIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV 128
+ L GE +VD EWMAYLG R+LR+L DC+ +T++A+ LTG+T ++ELDL+RC K+
Sbjct: 74 EVNLSGEATVDGEWMAYLGGCRHLRALRATDCKALTNNAIRQLTGLTAMEELDLARCRKI 133
Query: 129 TDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLT 188
+D + H+LS L KL L+ETGLT G+ LL L L +LDLGG PVTD L S Q L
Sbjct: 134 SDDAVPHILSFKMLRKLGLAETGLTTKGLLLLPGLSRLVLLDLGGCPVTDADLISFQALG 193
Query: 189 KLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLP 228
LE+LDLWGS+V+N GA L F L +LNLA T VT +P
Sbjct: 194 MLEHLDLWGSKVTNMGARCLSSFKTLKYLNLAMTAVTAIP 233
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/220 (36%), Positives = 115/220 (52%), Gaps = 13/220 (5%)
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVLT-KLEYLDLWGSQVSNRG-AAVLKMFPRLSFLNLA 220
+ L++LDL +T+ ++ Q L L ++DL +++ + G A+ P + L+L
Sbjct: 305 IPKLAILDLRATGLTNELMLKFQGLGDNLRWIDLSYTKIDSEGVGAIAGHAPNVEQLSLN 364
Query: 221 WTGVTK-----LPNISSLECLNLS------FIQQVGAETDLVLSLTALQNLNHLERLNLE 269
T V L + L+ LNL F+ E + L+ L+ L HL RL++
Sbjct: 365 HTPVDDNVFIYLVHFPVLQSLNLGGSKVNGFMTVGSEEFQQISVLSYLEQLQHLRRLDMR 424
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 329
T V DA L L +L HL + + SL+D L QLSS L L I A +T GL S+
Sbjct: 425 YTGVGDAALHGLKNLVQLSHLHIHSNSLSDECLQQLSSFPNLVCLGIGGATITADGLLSY 484
Query: 330 KPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSV 369
KPP L+ LDL WLLTE A+L FC+ HPRI VW+E +V
Sbjct: 485 KPPSLLEELDLTDCWLLTEPALLDFCEAHPRIMVWNEKTV 524
>gi|4454052|emb|CAA23049.1| hypothetical protein [Arabidopsis thaliana]
gi|7269232|emb|CAB81301.1| hypothetical protein [Arabidopsis thaliana]
Length = 227
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 120/220 (54%), Positives = 156/220 (70%), Gaps = 35/220 (15%)
Query: 6 ESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEV--- 62
ES LVRLC++ AC+SG++V++WR QRRSLE LP HLAD+LLR L+++RL+FPSLLE+
Sbjct: 2 ESPLVRLCLKEACKSGDAVERWRLQRRSLESLPPHLADALLRRLLKKRLLFPSLLEIVLV 61
Query: 63 --------------------------------FKHNAEAIELRGENSVDAEWMAYLGAFR 90
FK++ E I+LRG++SV+AEWMAY+G F
Sbjct: 62 LVHRCGKCNDCMDTELLYLYHTTKQDSFLCRGFKYSVENIDLRGKSSVNAEWMAYIGGFV 121
Query: 91 YLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET 150
L +LN++DC+R+ SS LW +TG+T L ELDLSRC KVTDAGMKHL S+ L+KLW+S+T
Sbjct: 122 NLITLNLSDCQRINSSTLWPITGLTSLTELDLSRCFKVTDAGMKHLQSVVNLKKLWISQT 181
Query: 151 GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKL 190
G+T GI+LL+SL+ LS+LDLGGLPVTD L SLQVL L
Sbjct: 182 GVTEVGISLLASLKKLSLLDLGGLPVTDQNLISLQVLPVL 221
>gi|302818476|ref|XP_002990911.1| hypothetical protein SELMODRAFT_132548 [Selaginella moellendorffii]
gi|300141242|gb|EFJ07955.1| hypothetical protein SELMODRAFT_132548 [Selaginella moellendorffii]
Length = 196
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 95/185 (51%), Positives = 129/185 (69%), Gaps = 2/185 (1%)
Query: 4 ERESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVF 63
E LV LC+EAA +S +SV+ WRRQRR+LE LPAHLA+SLL L+ + L P LLE+F
Sbjct: 2 EGGGTLVDLCLEAASRSADSVRSWRRQRRTLEILPAHLAESLLHQLLVKNLFSPPLLELF 61
Query: 64 KHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTG--MTCLKELD 121
+ + E ++L GE SVDAEWMAY+G FR+LR L V C+ + +SA+W L+G +
Sbjct: 62 QLSVEELDLNGELSVDAEWMAYIGGFRHLRVLKVESCKALNNSAIWHLSGKLHFSFERRL 121
Query: 122 LSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVL 181
+ RC K+T+ G++H+L++ L+ L LSETG+ GI L+ L+NLS LDLGGLPVTD +
Sbjct: 122 IDRCSKITNQGLEHILTLGKLKHLGLSETGIGEQGIGKLAVLRNLSHLDLGGLPVTDSHV 181
Query: 182 RSLQV 186
SL V
Sbjct: 182 SSLLV 186
>gi|357134265|ref|XP_003568738.1| PREDICTED: uncharacterized protein LOC100844673 [Brachypodium
distachyon]
Length = 547
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 116/338 (34%), Positives = 187/338 (55%), Gaps = 20/338 (5%)
Query: 6 ESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKH 65
E+ LV CI+AA + +V WRRQRRSLERLP LAD+LL+ L RRL+ PSLLEVF+H
Sbjct: 13 ETRLVDRCIDAAARGPATVDAWRRQRRSLERLPGQLADALLQRLAARRLLSPSLLEVFRH 72
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
+ E I+L G +VDAEW+AYLG+FRYLR L +ADC+ V +SA+WAL+ +
Sbjct: 73 SVEEIDLSGNIAVDAEWLAYLGSFRYLRVLKLADCKNVNNSAVWALSDLG---------G 123
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+ +TD ++ L ++ LE L + + +T +G ++L + LS L++ VT L
Sbjct: 124 IHMTDKTLRSLQVLTRLEHLDIWGSEITNEGASVLKAFTRLSFLNVSWTHVT-----RLP 178
Query: 186 VLTKLEYLDLWGSQV-SNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQV 244
L L++L++ + S R P F A + SS++ +L ++
Sbjct: 179 PLPNLQHLNMSNCTIHSIRDGDSEVNVPLEKFTVCAASFGNIFEVFSSIQGSSLLYLDMS 238
Query: 245 GAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFK-ELIHLSLRNASLTDVSLH 303
G +L + + H+E L+L ++++DA + ++ L HLSL+N +T +
Sbjct: 239 GCSLS---NLHIFEKMKHIEHLDLSFSRITDAAIQHVANIGMNLRHLSLKNTGITSQAPC 295
Query: 304 QLS-SLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
L+ ++ L++LS+ + +S L SL+++DL
Sbjct: 296 ILAGTVPNLSSLSLAYTEIDDSALAYISMMPSLRVIDL 333
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 109/322 (33%), Positives = 169/322 (52%), Gaps = 42/322 (13%)
Query: 106 SALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS-TLEKLWLSETGLTADGIALLSSLQ 164
S L M ++ LDLS ++TDA ++H+ +I L L L TG+T+ +L+
Sbjct: 243 SNLHIFEKMKHIEHLDLSFS-RITDAAIQHVANIGMNLRHLSLKNTGITSQAPCILA--- 298
Query: 165 NLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV 224
G +P L L L +++ + A + M P L ++L+ T
Sbjct: 299 -------GTVP-------------NLSSLSLAYTEIDDSALAYISMMPSLRVIDLSHT-- 336
Query: 225 TKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTF 284
+I C V ++ + S+ L++L +LE LNLE T +SD + PL++F
Sbjct: 337 ----SIKGFTC--------VEVNSEKIPSMPPLEHLMYLESLNLEDTALSDEVIPPLASF 384
Query: 285 KELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGW 344
+ + +L L++ L+D +LH LSS S LT+L +L++SGL F PP L++LDL G W
Sbjct: 385 RAIKYLYLKSDFLSDPALHALSSASNLTHLGFCGNILSDSGLLQFVPPAKLRVLDLSGCW 444
Query: 345 LLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSLRASL--VKQKQDPMPM 402
+LT DA+ FCK HP IEV HEL + G++ SR +A V ++ P +
Sbjct: 445 ILTGDAVSTFCKHHPVIEVTHELWQELQPNSGGTSQVHKSRQLPKAKTEAVNRQAGPSRL 504
Query: 403 SH-SFLDQRLKYSREELLELQY 423
S F+D+R+KYSREEL+ELQ+
Sbjct: 505 SGIFFVDERIKYSREELMELQH 526
>gi|148909462|gb|ABR17829.1| unknown [Picea sitchensis]
Length = 455
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 126/368 (34%), Positives = 190/368 (51%), Gaps = 58/368 (15%)
Query: 84 AYLGAFRYL-----RSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLS 138
+++ A+R L ++L D + + L GM L+ LDLS C V D+ M +
Sbjct: 110 SFIDAYRVLSCLHAQNLTFLDLSGSSIDNVSFLAGMNRLESLDLS-CTGVIDSSMNSVAD 168
Query: 139 I-STLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
I + L+ L LS T +T+D +A+L+ G +P KLE++ L
Sbjct: 169 IGANLKHLNLSTTRVTSDALAILA----------GNVP-------------KLEFISLSH 205
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTAL 257
+ V + A L + L ++L++T + FI +E++ SL +L
Sbjct: 206 TMVDDNALAYLGLISALRNISLSFTNIK-------------GFIHVGESESNPQFSLASL 252
Query: 258 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 317
+ L HLE L+LE T +SD PL KEL HLSLR+ L+D+SLH +SSL KL LSI+
Sbjct: 253 RKLEHLEILDLENTHISDLACQPLIFLKELYHLSLRSDFLSDISLHTVSSLPKLKYLSIQ 312
Query: 318 DAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIG 377
AV+T +GL SF PP L++LDL WLLT + IL+F K +P++++ HEL V DQ
Sbjct: 313 GAVVTKTGLCSFVPPPLLQVLDLSDCWLLTMEGILEFWKTYPQLQLRHELIVTIFEDQTH 372
Query: 378 -SNGPSPSRTSLRASLVKQKQDPM-----------PMSHSFLDQRLKYSREELLELQ--- 422
S G S ++ A VKQ + P F+D+R+KYS+ ELL ++
Sbjct: 373 RSRGNMFSYETMEAFTVKQGRKSRSRASSSSLHEKPTQRKFIDERIKYSKSELLRIRAGV 432
Query: 423 YSSLSLAR 430
+S+LS +
Sbjct: 433 HSALSFSE 440
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 66/83 (79%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF 216
+A LS L +L+ LDLGGLPVTDLV+ SLQ LT+L LD+WGS++SN GA +LK FP+L+
Sbjct: 1 MARLSVLTSLTSLDLGGLPVTDLVVSSLQALTQLHQLDMWGSKISNEGAILLKAFPKLNC 60
Query: 217 LNLAWTGVTKLPNISSLECLNLS 239
LNLAWT VT+LP + SL LN+S
Sbjct: 61 LNLAWTNVTRLPALVSLTSLNMS 83
>gi|215769345|dbj|BAH01574.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 483
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 109/270 (40%), Positives = 154/270 (57%), Gaps = 43/270 (15%)
Query: 114 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 173
M LKELDLSRC K++DAG+KH+ SI +LEKL +S+TGLT +G+ +SSL NL +LDLGG
Sbjct: 1 MRTLKELDLSRCSKISDAGIKHIASIESLEKLHVSQTGLTDNGVMAISSLINLRLLDLGG 60
Query: 174 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 233
+ TD LRSLQVLT+LE+LD+WGS+++N GA+VL F LSFLN++WT VT LP + +L
Sbjct: 61 VRFTDKALRSLQVLTQLEHLDIWGSEITNEGASVLIAFTSLSFLNISWTRVTCLPILPTL 120
Query: 234 ECLNLS--FIQQVG--------------------AETDLVLS------------------ 253
CLN+S I + D V S
Sbjct: 121 RCLNMSNCTIHSICNGEFQVLIHLEKLIISAASFGNIDEVFSSILPSSLTYLDMSSCSSS 180
Query: 254 -LTALQNLNHLERLNLEQTQ-VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLS-SLSK 310
L L N+ +LE L+L ++ +SDA + + L LSL N+ +T +L L+ ++
Sbjct: 181 NLYFLGNMRNLEHLDLSYSRIISDAIEYIANIGMNLKFLSLSNSEVTSQALCVLAGTVPS 240
Query: 311 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
LT LS+ + +S L SL++L+L
Sbjct: 241 LTTLSLAHTKIDDSALLYISMMPSLRILNL 270
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 125/392 (31%), Positives = 200/392 (51%), Gaps = 54/392 (13%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
+ E + L AF L LN++ W T +TCL L RC+ +++ + +
Sbjct: 87 ITNEGASVLIAFTSLSFLNIS----------W--TRVTCLPILPTLRCLNMSNCTIHSIC 134
Query: 138 S-----ISTLEKL-----------------------WLSETGLTADGIALLSSLQNLSVL 169
+ + LEKL +L + ++ + L +++NL L
Sbjct: 135 NGEFQVLIHLEKLIISAASFGNIDEVFSSILPSSLTYLDMSSCSSSNLYFLGNMRNLEHL 194
Query: 170 DLG-GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK-MFPRLSFLNLAWTGV--T 225
DL ++D + + L++L L S+V+++ VL P L+ L+LA T + +
Sbjct: 195 DLSYSRIISDAIEYIANIGMNLKFLSLSNSEVTSQALCVLAGTVPSLTTLSLAHTKIDDS 254
Query: 226 KLPNIS---SLECLNLS--FIQQVGAETDL-VLSLTALQNLNHLERLNLEQTQVSDATLF 279
L IS SL LNLS I+ E + VLSL+AL+ L +LE LNL TQ+ D +
Sbjct: 255 ALLYISMMPSLRILNLSRTCIKGFMMENSVKVLSLSALEELKYLESLNLNNTQLMDDVIP 314
Query: 280 PLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 339
PL++ + L +L L++ L+D +LH LSS S L +L +L+ +GL F PP +L++LD
Sbjct: 315 PLASLRALKYLFLKSDFLSDPALHALSSASNLIHLGFCGNILSTTGLRKFVPPATLRMLD 374
Query: 340 LHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGS---NGPSPSRTSLRASLVKQK 396
L G W+LT DAI FC HP IEV HEL ++ G+ + S ++A + K
Sbjct: 375 LSGCWILTGDAISAFCTCHPVIEVRHELIQELQANYGGTSHLHKSSRQPQQVKAKVAKSS 434
Query: 397 QDPMPMSH-SFLDQRLKYSREELLELQYSSLS 427
P ++ F+D+R+KYS+EE++ELQ+ + S
Sbjct: 435 AGPSRLAEICFVDERIKYSKEEMMELQHQAKS 466
>gi|4972088|emb|CAB43884.1| putative protein [Arabidopsis thaliana]
gi|7269233|emb|CAB81302.1| putative protein [Arabidopsis thaliana]
Length = 364
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 120/341 (35%), Positives = 167/341 (48%), Gaps = 48/341 (14%)
Query: 110 ALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLS----SLQN 165
+ T +C+ LD+S K + L ++ LE L LS T D + ++ +L+N
Sbjct: 37 SFTNKSCITYLDVS---KTSLKNFSFLETMFNLEHLDLSSTAFGDDSVGFVACVGENLKN 93
Query: 166 LSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV- 224
L+V D P S V N V P+L L+++ T V
Sbjct: 94 LNVSDTQITP----------------------SGVGNLAGHV----PQLETLSMSQTFVD 127
Query: 225 --------TKLPNISSLEC-LN--LSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQV 273
T +P I +L+ +N L F + + + SL ALQ+L LE L+LE +
Sbjct: 128 DLSILLISTTMPCIKALDLGMNSTLGFYYLISPQEEKEKSLAALQSLTSLETLSLEHPYL 187
Query: 274 SDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPR 333
D L LS+ L HLSL + SLTD +LH LSSL L +L +RD VLT++GL F+PP
Sbjct: 188 GDKALSGLSSLTGLTHLSLTSTSLTDSTLHHLSSLPNLVSLGVRDGVLTSNGLEKFRPPN 247
Query: 334 SLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSLRASLV 393
L+ LDL G WLLT+D I CK +P I+V HE + DQ S + S
Sbjct: 248 RLRTLDLQGCWLLTKDDIAGLCKRYPHIKVRHEHADSSSLDQNQLLPRSSTPQSFGKVAR 307
Query: 394 KQKQDP---MPMSHSFLDQRLKYSREELLELQYSSLSLARP 431
+ Q P + + SFLDQR+KY+REEL+ LQ S LS P
Sbjct: 308 RNNQRPESSVAVPRSFLDQRVKYNREELVALQNSPLSQLLP 348
>gi|297604057|ref|NP_001054919.2| Os05g0212200 [Oryza sativa Japonica Group]
gi|255676136|dbj|BAF16833.2| Os05g0212200 [Oryza sativa Japonica Group]
Length = 153
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/127 (59%), Positives = 91/127 (71%), Gaps = 8/127 (6%)
Query: 6 ESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKH 65
E+ LV CI+AA +V+ WRRQRRSLERLPA LAD+LLR L RRL+FPSLLEVF+H
Sbjct: 16 ETPLVDRCIDAAAGGAATVEAWRRQRRSLERLPAQLADALLRRLAARRLLFPSLLEVFQH 75
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMT--------CL 117
+ E I+L G +VDAEW+AYLGAFRYLR L +ADC+ V SSA+WAL+G C+
Sbjct: 76 SVEEIDLSGHIAVDAEWLAYLGAFRYLRVLKLADCKNVNSSAVWALSGTILEAFLNHDCI 135
Query: 118 KELDLSR 124
DL R
Sbjct: 136 YHGDLDR 142
>gi|413949467|gb|AFW82116.1| hypothetical protein ZEAMMB73_510951 [Zea mays]
Length = 343
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 115/339 (33%), Positives = 184/339 (54%), Gaps = 26/339 (7%)
Query: 7 SELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHN 66
S LV CI+AA + +V+ WRRQRRSLERLPA LAD+LLR L RRL+FPSLLEVF +
Sbjct: 14 SRLVDRCIDAAARGPATVEAWRRQRRSLERLPAPLADALLRRLAARRLLFPSLLEVFGRS 73
Query: 67 AEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCV 126
E ++L G SV++EW+AYLG+FRYLR L +ADC+ + + A+W+L+G +
Sbjct: 74 VEEVDLSGFLSVNSEWLAYLGSFRYLRVLKLADCKNINNDAVWSLSGG-----------I 122
Query: 127 KVTDAGMKHLLSISTLEKL--WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL 184
+TD ++ L ++ LE L W SET T +G + L S L L+L V L
Sbjct: 123 LMTDKTLQSLQVLTKLEHLDIWGSET--TNEGASALKSFARLLSLNLALTRV-----NHL 175
Query: 185 QVLTKLEYLDLWGSQVSNRGAAVLKM-FPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQ 243
+ YL++ ++ + ++ P +F+ A T SS++ +L +
Sbjct: 176 SIPPTTSYLNMSNCEIHSICDVDSEVPVPLENFIVSAATFGNIDKVFSSIQASSLIHLDL 235
Query: 244 VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTF-KELIHLSLRNASLTDVSL 302
+ +L+ L+ + +LE L+L ++D + ++ L +LSL+N +T +L
Sbjct: 236 SSCKLS---NLSFLEKMKNLEHLDLSYNIITDGAIEHIAKIGTNLQYLSLKNTGITSQAL 292
Query: 303 HQLS-SLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
L+ ++ LT+LS+ + + +S L L+ +DL
Sbjct: 293 CILAGTVPNLTSLSLANTKIDDSALAYIGMIPLLRTIDL 331
>gi|59802533|gb|AAX07510.1| putative regulatory subunit [Gemmata sp. Wa1-1]
Length = 550
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/285 (35%), Positives = 148/285 (51%), Gaps = 18/285 (6%)
Query: 65 HNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSR 124
+N +++LR D + L L SL++ D + VT + L L G+T L LDL
Sbjct: 162 NNLASLDLRDTRVTDV-GLQELKGLNNLASLDLRDTK-VTDTGLKELKGLTNLTALDL-F 218
Query: 125 CVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL 184
+VTD G+K L ++ L L LS TG+T G+ L S L++LDL G VTD L L
Sbjct: 219 STQVTDVGLKELNGLTKLASLDLSRTGVTGTGLIELKSFTKLALLDLSGTRVTDAGLHQL 278
Query: 185 QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLS 239
+ LT L L L G++V++ G LK L+ L+L+ T G+ +L +++L L+LS
Sbjct: 279 KGLTSLTSLHLGGTRVTDVGLKELKGLTSLTSLHLSGTRTTDAGLQELNGLTNLTSLHLS 338
Query: 240 --FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 297
+ VG L L++ L L+L T V+D L L L L L + +
Sbjct: 339 DTRVTDVG--------LKELKSFTKLTSLHLGGTGVTDTGLKELKGLTNLTALDLFSTQV 390
Query: 298 TDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 342
TDV L +L+ L+KLT+L + A +T++GL K L LLDL G
Sbjct: 391 TDVGLQELNGLTKLTSLYLSAAAITDTGLKELKELTQLALLDLSG 435
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 98/284 (34%), Positives = 144/284 (50%), Gaps = 28/284 (9%)
Query: 69 AIELRGENSVDAEWMAYLGAFRYLRSLN-VADCR----RVTSSALWALTGMTCLKELDLS 123
+++LRG D + L+ LN + + R VT+ L L G+ L LDL
Sbjct: 118 SLDLRGTEVTDV-------GLQELKGLNSLTELRLRATEVTNVGLQELKGLNNLASLDL- 169
Query: 124 RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRS 183
R +VTD G++ L ++ L L L +T +T G+ L L NL+ LDL VTD+ L+
Sbjct: 170 RDTRVTDVGLQELKGLNNLASLDLRDTKVTDTGLKELKGLTNLTALDLFSTQVTDVGLKE 229
Query: 184 LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNL 238
L LTKL LDL + V+ G LK F +L+ L+L+ T VT +L ++SL L+L
Sbjct: 230 LNGLTKLASLDLSRTGVTGTGLIELKSFTKLALLDLSGTRVTDAGLHQLKGLTSLTSLHL 289
Query: 239 SF--IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 296
+ VG L L+ L L L+L T+ +DA L L+ L L L +
Sbjct: 290 GGTRVTDVG--------LKELKGLTSLTSLHLSGTRTTDAGLQELNGLTNLTSLHLSDTR 341
Query: 297 LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
+TDV L +L S +KLT+L + +T++GL K +L LDL
Sbjct: 342 VTDVGLKELKSFTKLTSLHLGGTGVTDTGLKELKGLTNLTALDL 385
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/218 (38%), Positives = 118/218 (54%), Gaps = 5/218 (2%)
Query: 125 CVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL 184
+VTDAG++ L ++ L L LS T +T +G+ L L NL+ LDL VTD L+ L
Sbjct: 3 STQVTDAGLQELKGLANLTSLGLSATKVTNEGLKELKELTNLTALDLFSTGVTDTGLQEL 62
Query: 185 QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLN-LSFIQQ 243
+ LT L L+L +QV+ G LK L+ LNL TGVT + L+ LN L+ +
Sbjct: 63 KGLTNLTSLNLGVTQVTGAGLQELKGLTNLTSLNLGSTGVTD-AGLQDLKGLNKLASLDL 121
Query: 244 VGAE-TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 302
G E TD + L L+ LN L L L T+V++ L L L L LR+ +TDV L
Sbjct: 122 RGTEVTD--VGLQELKGLNSLTELRLRATEVTNVGLQELKGLNNLASLDLRDTRVTDVGL 179
Query: 303 HQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
+L L+ L +L +RD +T++GL K +L LDL
Sbjct: 180 QELKGLNNLASLDLRDTKVTDTGLKELKGLTNLTALDL 217
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 94/272 (34%), Positives = 136/272 (50%), Gaps = 17/272 (6%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
V + L L SL ++ +VT+ L L +T L LDL VTD G++ L
Sbjct: 6 VTDAGLQELKGLANLTSLGLS-ATKVTNEGLKELKELTNLTALDL-FSTGVTDTGLQELK 63
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
++ L L L T +T G+ L L NL+ L+LG VTD L+ L+ L KL LDL G
Sbjct: 64 GLTNLTSLNLGVTQVTGAGLQELKGLTNLTSLNLGSTGVTDAGLQDLKGLNKLASLDLRG 123
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNL--SFIQQVGAETDL 250
++V++ G LK L+ L L T VT +L +++L L+L + + VG
Sbjct: 124 TEVTDVGLQELKGLNSLTELRLRATEVTNVGLQELKGLNNLASLDLRDTRVTDVG----- 178
Query: 251 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 310
L L+ LN+L L+L T+V+D L L L L L + +TDV L +L+ L+K
Sbjct: 179 ---LQELKGLNNLASLDLRDTKVTDTGLKELKGLTNLTALDLFSTQVTDVGLKELNGLTK 235
Query: 311 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 342
L +L + +T +GL K L LLDL G
Sbjct: 236 LASLDLSRTGVTGTGLIELKSFTKLALLDLSG 267
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 133/271 (49%), Gaps = 22/271 (8%)
Query: 77 SVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHL 136
V + L +F L L+++ R VT + L L G+T L L L +VTD G+K L
Sbjct: 245 GVTGTGLIELKSFTKLALLDLSGTR-VTDAGLHQLKGLTSLTSLHLG-GTRVTDVGLKEL 302
Query: 137 LSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLW 196
+++L L LS T T G+ L+ L NL+ L L VTD+ L+ L+ TKL L L
Sbjct: 303 KGLTSLTSLHLSGTRTTDAGLQELNGLTNLTSLHLSDTRVTDVGLKELKSFTKLTSLHLG 362
Query: 197 GSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSFIQQVGAETDLV 251
G+ V++ G LK L+ L+L T VT +L ++ L L LS A TD
Sbjct: 363 GTGVTDTGLKELKGLTNLTALDLFSTQVTDVGLQELNGLTKLTSLYLS----AAAITD-- 416
Query: 252 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L+ L L L+L T+V+DA L LS +L L L +TD L +L L+ L
Sbjct: 417 TGLKELKELTQLALLDLSGTRVTDAGLQELSGLTKLAFLRLGGTRVTDAGLKELKGLTSL 476
Query: 312 TNLSIRDAVLTNSG---------LGSFKPPR 333
T+L + +T++G L + PPR
Sbjct: 477 TSLHLSGTRVTDAGLQELSGLTNLTTTGPPR 507
>gi|406836026|ref|ZP_11095620.1| leucine-rich repeat-containing protein [Schlesneria paludicola DSM
18645]
Length = 586
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/250 (36%), Positives = 131/250 (52%), Gaps = 14/250 (5%)
Query: 88 AFRYLRSLNVADCRR--VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
A + L L+V + VT + + L G LK L L KV+D G+K LL + L+ L
Sbjct: 334 ALKTLGELDVLQIGKTAVTDAGVEELAGFKHLKILRLG-STKVSDEGLKSLLGLEHLQSL 392
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
L TG+T G L+SL L+ LDL VTD +R L L+ LEYL L +++S+ G
Sbjct: 393 GLGGTGITDVGAKQLASLTTLTGLDLDATAVTDEGVRELGGLSNLEYLSLISTKISDDGV 452
Query: 206 AVLKMFPRLSFL-----NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNL 260
+ L F +L L ++ G+ L ++S L L LS Q TD + + L+NL
Sbjct: 453 SGLGAFKKLKMLFLHNNQISDEGLKGLNDLSQLTTLYLSMTQV----TD--VGMKELKNL 506
Query: 261 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV 320
HL+ L L TQ++DA L L+ EL L +RN ++TD L L+S LT+L I
Sbjct: 507 KHLKDLVLCDTQITDAGLKELTGLSELNVLVIRNVAVTDACLEHLTSFKNLTHLCIDVHR 566
Query: 321 LTNSGLGSFK 330
+ +GL +FK
Sbjct: 567 FSEAGLNAFK 576
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 133/282 (47%), Gaps = 19/282 (6%)
Query: 69 AIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV 128
I G + ++ + L SL++++ + +T L L + L L+L R +
Sbjct: 54 GISFAGNARFNDRYVHLISPLGRLESLDLSNTQ-ITDLGLKELRKLNALTSLNL-RYTAI 111
Query: 129 TDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLT 188
+D G+ L +S L+ L LS T ++ G+ L +L+NL+ +DL +TD L+ L VL
Sbjct: 112 SDVGLSELSEMSKLDTLNLSATQISDAGLDKLLALRNLTAIDLSETAITDSALKPLSVLE 171
Query: 189 KLEYLDLWGSQVSNRGAAVLKMFPRLSFL--------NLAWTGVTKLPNISSLECLNLSF 240
L ++L +++ G A L L L N A GV L N+++LE N
Sbjct: 172 NLSTINLSTTKIDGSGLADLSGLKNLKTLVLSHSPITNEALAGVAALRNLTTLELWN--- 228
Query: 241 IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 300
+ A+ L +L L L +LNL T + D L L+T L L+L +TD
Sbjct: 229 -TPISAD-----GLKSLGTLTDLTKLNLGFTSLDDTGLAELATLTNLKALNLMQTGVTDT 282
Query: 301 SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 342
L LS + LTNL++ D +T++G+ + + L L L G
Sbjct: 283 GLSSLSQIKNLTNLNLNDTQITDAGMVAIARHKDLNELHLEG 324
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 126/253 (49%), Gaps = 27/253 (10%)
Query: 88 AFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWL 147
A R L ++++++ +T SAL L+ + L ++LS K+ +G+ L + L+ L L
Sbjct: 145 ALRNLTAIDLSETA-ITDSALKPLSVLENLSTINLS-TTKIDGSGLADLSGLKNLKTLVL 202
Query: 148 SETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAV 207
S + +T + +A +++L+NL+ L+L P++ L+SL LT L L+L + + + G A
Sbjct: 203 SHSPITNEALAGVAALRNLTTLELWNTPISADGLKSLGTLTDLTKLNLGFTSLDDTGLAE 262
Query: 208 LKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLN 267
L L LNL TGVT L++L + +L LN
Sbjct: 263 LATLTNLKALNLMQTGVTD-------------------------TGLSSLSQIKNLTNLN 297
Query: 268 LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLG 327
L TQ++DA + ++ K+L L L LTDV L L +L +L L I +T++G+
Sbjct: 298 LNDTQITDAGMVAIARHKDLNELHLEGTRLTDVGLRALKTLGELDVLQIGKTAVTDAGVE 357
Query: 328 SFKPPRSLKLLDL 340
+ LK+L L
Sbjct: 358 ELAGFKHLKILRL 370
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 133/268 (49%), Gaps = 13/268 (4%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G S+D +A L L++LN+ VT + L +L+ + L L+L+ ++TDAGM
Sbjct: 251 GFTSLDDTGLAELATLTNLKALNLMQTG-VTDTGLSSLSQIKNLTNLNLNDT-QITDAGM 308
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
+ L +L L T LT G+ L +L L VL +G VTD + L L+ L
Sbjct: 309 VAIARHKDLNELHLEGTRLTDVGLRALKTLGELDVLQIGKTAVTDAGVEELAGFKHLKIL 368
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSFIQQVGAET 248
L ++VS+ G L L L L TG+T +L ++++L L+L A T
Sbjct: 369 RLGSTKVSDEGLKSLLGLEHLQSLGLGGTGITDVGAKQLASLTTLTGLDL----DATAVT 424
Query: 249 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 308
D + L L++LE L+L T++SD + L FK+L L L N ++D L L+ L
Sbjct: 425 D--EGVRELGGLSNLEYLSLISTKISDDGVSGLGAFKKLKMLFLHNNQISDEGLKGLNDL 482
Query: 309 SKLTNLSIRDAVLTNSGLGSFKPPRSLK 336
S+LT L + +T+ G+ K + LK
Sbjct: 483 SQLTTLYLSMTQVTDVGMKELKNLKHLK 510
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 135/269 (50%), Gaps = 19/269 (7%)
Query: 81 EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
E +A + A R L +L + + +++ L +L +T L +L+L + D G+ L +++
Sbjct: 210 EALAGVAALRNLTTLELWNTP-ISADGLKSLGTLTDLTKLNLG-FTSLDDTGLAELATLT 267
Query: 141 TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 200
L+ L L +TG+T G++ LS ++NL+ L+L +TD + ++ L L L G+++
Sbjct: 268 NLKALNLMQTGVTDTGLSSLSQIKNLTNLNLNDTQITDAGMVAIARHKDLNELHLEGTRL 327
Query: 201 SNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSFIQQVGAETDLVLSLT 255
++ G LK L L + T GV +L L+ L L +V E L
Sbjct: 328 TDVGLRALKTLGELDVLQIGKTAVTDAGVEELAGFKHLKILRLGS-TKVSDE-----GLK 381
Query: 256 ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLS 315
+L L HL+ L L T ++D L++ L L L ++TD + +L LS L LS
Sbjct: 382 SLLGLEHLQSLGLGGTGITDVGAKQLASLTTLTGLDLDATAVTDEGVRELGGLSNLEYLS 441
Query: 316 IRDAVLTN---SGLGSFKPPRSLKLLDLH 341
+ +++ SGLG+FK LK+L LH
Sbjct: 442 LISTKISDDGVSGLGAFKK---LKMLFLH 467
>gi|224120462|ref|XP_002331054.1| predicted protein [Populus trichocarpa]
gi|222872984|gb|EEF10115.1| predicted protein [Populus trichocarpa]
Length = 576
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 147/303 (48%), Gaps = 25/303 (8%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N ++ L+ SV AE M L +L++ C + L L G+ L+ L++ C
Sbjct: 181 NITSLSLKKSCSVTAEGMRAFSTLLNLENLDMERCSGI-HGGLVHLKGLKKLESLNIRCC 239
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+TD MK + ++ L++L +S T +T G++ L LQ L +L+L G +T L S+
Sbjct: 240 KCITDMDMKAISGLTNLKELQISNTNVTDVGVSYLRGLQKLIMLNLEGCNITTACLDSIS 299
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSF 240
L L YL+L + + G L L+LA+ VT L + +LE LNL
Sbjct: 300 ALATLAYLNLNRCHLPDDGCDKFSGLKNLKVLSLAFNDVTDACLVHLKGLKNLESLNLDS 359
Query: 241 IQQVGAE---------------TDLVLSLTALQNLN---HLERLNLEQTQVSDATLFPLS 282
+ +G E +D ++ + L++L+ HLE LNL T V+D L LS
Sbjct: 360 CR-IGDEGIANLAGLPLKSLELSDTIVGSSGLRHLSGIPHLENLNLSFTLVTDGGLRKLS 418
Query: 283 TFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 342
L L+L +TD L L+SL+ LT L + A +T+SG K ++LK L++ G
Sbjct: 419 GLTSLRSLNLDARQITDAGLTALTSLTGLTRLDLFGARITDSGTNCLKYFKNLKSLEICG 478
Query: 343 GWL 345
G L
Sbjct: 479 GGL 481
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 151/336 (44%), Gaps = 84/336 (25%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL----- 137
+ +L + L SLN+ C+ +T + A++G+T LKEL +S VTD G+ +L
Sbjct: 222 LVHLKGLKKLESLNIRCCKCITDMDMKAISGLTNLKELQISN-TNVTDVGVSYLRGLQKL 280
Query: 138 -------------------SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTD 178
+++TL L L+ L DG S L+NL VL L VTD
Sbjct: 281 IMLNLEGCNITTACLDSISALATLAYLNLNRCHLPDDGCDKFSGLKNLKVLSLAFNDVTD 340
Query: 179 LVLRSLQVLTKLEYLDLWGSQVSNRGAAVL-----------------------KMFPRLS 215
L L+ L LE L+L ++ + G A L P L
Sbjct: 341 ACLVHLKGLKNLESLNLDSCRIGDEGIANLAGLPLKSLELSDTIVGSSGLRHLSGIPHLE 400
Query: 216 FLNLAWT-----GVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 270
LNL++T G+ KL ++SL LNL Q A LTAL +L L RL+L
Sbjct: 401 NLNLSFTLVTDGGLRKLSGLTSLRSLNLDARQITDA------GLTALTSLTGLTRLDLFG 454
Query: 271 TQVSDATLFPLSTFK---------------------ELIHLSL----RNASLTDVSLHQL 305
+++D+ L FK +L+HL++ +N +LTD +L +
Sbjct: 455 ARITDSGTNCLKYFKNLKSLEICGGGLTDAGVKNIKDLVHLTVLNLSQNTNLTDKTLELI 514
Query: 306 SSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 341
S L++L +L++ ++++TN GL KP ++L+ L L
Sbjct: 515 SGLTELVSLNVSNSLITNEGLRYLKPLKNLRALTLE 550
>gi|359484681|ref|XP_002262830.2| PREDICTED: insulin-like growth factor-binding protein complex acid
labile subunit-like [Vitis vinifera]
gi|296084545|emb|CBI25566.3| unnamed protein product [Vitis vinifera]
Length = 578
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 138/298 (46%), Gaps = 36/298 (12%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS-- 140
+ +L L SLN+ C+ +T S L AL+G+T LKEL +S C +TD G+ +L +
Sbjct: 223 LIHLKGLTKLESLNIRYCKCITDSDLKALSGLTSLKELQMS-CSNITDIGISYLKGLCKL 281
Query: 141 ----------------------TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTD 178
L L L+ GL+ G S L+NL VL++G +TD
Sbjct: 282 MLLDVEGCHVTTSCLDSLSALVALSYLNLNRCGLSDVGCEKFSGLKNLKVLNMGFNNITD 341
Query: 179 LVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSL 233
L L+ LT LE L+L + + G A L L L L+ T G+ L ++ L
Sbjct: 342 ACLVHLKGLTNLESLNLDSCSIEDEGLANLTGLSLLKCLELSDTKVGSNGLCHLSGLTKL 401
Query: 234 ECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 293
E LNLSF + L L L L+ LNL+ Q++DA L +++ L HL L
Sbjct: 402 ESLNLSFTLVTDS------GLKKLCGLTSLKSLNLDARQITDAGLAAITSLTGLTHLDLF 455
Query: 294 NASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 351
A ++D + L L L I LT++G+ + K SL LL+L LT+ +
Sbjct: 456 GARISDAGTNCLRHFKNLQTLEICGGGLTDAGVKNIKGLASLTLLNLSQNCNLTDKTL 513
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 145/303 (47%), Gaps = 24/303 (7%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N ++ + N+V AE M + L L++ C R+ L L G+T L+ L++ C
Sbjct: 182 NLTSLSFKKSNTVTAEGMRAFSSLVNLAKLDLERCSRI-HGGLIHLKGLTKLESLNIRYC 240
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+TD+ +K L +++L++L +S + +T GI+ L L L +LD+ G VT L SL
Sbjct: 241 KCITDSDLKALSGLTSLKELQMSCSNITDIGISYLKGLCKLMLLDVEGCHVTTSCLDSLS 300
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNL-- 238
L L YL+L +S+ G L LN+ + +T L +++LE LNL
Sbjct: 301 ALVALSYLNLNRCGLSDVGCEKFSGLKNLKVLNMGFNNITDACLVHLKGLTNLESLNLDS 360
Query: 239 SFIQQVGAETDLVLS----------------LTALQNLNHLERLNLEQTQVSDATLFPLS 282
I+ G LS L L L LE LNL T V+D+ L L
Sbjct: 361 CSIEDEGLANLTGLSLLKCLELSDTKVGSNGLCHLSGLTKLESLNLSFTLVTDSGLKKLC 420
Query: 283 TFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 342
L L+L +TD L ++SL+ LT+L + A ++++G + ++L+ L++ G
Sbjct: 421 GLTSLKSLNLDARQITDAGLAAITSLTGLTHLDLFGARISDAGTNCLRHFKNLQTLEICG 480
Query: 343 GWL 345
G L
Sbjct: 481 GGL 483
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 119/236 (50%), Gaps = 6/236 (2%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N++ + +L L SLN+ C + L LTG++ LK L+LS KV G+
Sbjct: 335 GFNNITDACLVHLKGLTNLESLNLDSCS-IEDEGLANLTGLSLLKCLELSD-TKVGSNGL 392
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
HL ++ LE L LS T +T G+ L L +L L+L +TD L ++ LT L +L
Sbjct: 393 CHLSGLTKLESLNLSFTLVTDSGLKKLCGLTSLKSLNLDARQITDAGLAAITSLTGLTHL 452
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK--LPNISSLECLNLSFIQQVGAETDLV 251
DL+G+++S+ G L+ F L L + G+T + NI L L L + Q TD
Sbjct: 453 DLFGARISDAGTNCLRHFKNLQTLEICGGGLTDAGVKNIKGLASLTLLNLSQNCNLTDKT 512
Query: 252 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 307
L + + L L LN+ +++++ L L K L+ LSL + +T + +L S
Sbjct: 513 LEM--ISGLTALVSLNVSNSRITNNGLQHLKPLKNLLSLSLESCKVTASEIRKLQS 566
>gi|302796665|ref|XP_002980094.1| hypothetical protein SELMODRAFT_419616 [Selaginella moellendorffii]
gi|302822036|ref|XP_002992678.1| hypothetical protein SELMODRAFT_162512 [Selaginella moellendorffii]
gi|300139524|gb|EFJ06263.1| hypothetical protein SELMODRAFT_162512 [Selaginella moellendorffii]
gi|300152321|gb|EFJ18964.1| hypothetical protein SELMODRAFT_419616 [Selaginella moellendorffii]
Length = 578
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 111/440 (25%), Positives = 181/440 (41%), Gaps = 105/440 (23%)
Query: 4 ERESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVF 63
+ L+ L + C++ + + +S E+LP L +L L++ + + L + F
Sbjct: 51 NKAPSLLELAVRETCKNTQGI-------KSFEKLPRDLTQKILNELVQTQALSRELFQAF 103
Query: 64 KHNA-EAIELRGENSVDAEWM--------------------------------------- 83
+ A + I L VD WM
Sbjct: 104 EDCAIQDIYLGYYPGVDDSWMEVIGSQKFCLLAVDFSGSMVTDEGVQCLQICENVEIICM 163
Query: 84 -----------AYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDA- 131
+Y F L SL+ + +T + + L G+ LK LDL RC K+ D
Sbjct: 164 NECKYISDISLSYFTGFTNLTSLSFQKNKLITPAGMRHLAGLPNLKHLDLERCPKIHDGL 223
Query: 132 -----------------------GMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSV 168
MK L ++ L +L +S + + GI L L+ L V
Sbjct: 224 VYIKGLTKLEKLNLGWCNCIRSSDMKQLSGLTNLLELQISRSKVKDFGITFLKDLKKLEV 283
Query: 169 LDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----G 223
L++ G PVT + ++ LT L L+L +S+ G L+ L LNL++T G
Sbjct: 284 LNMEGCPVTFACMDTIAGLTSLTTLNLKSCYISDFGCRKLEGLGNLKNLNLSYTNVSDAG 343
Query: 224 VTKLPNISSLECLNL-----------SFIQQVGAET-DLVLSLTA------LQNLNHLER 265
+ L N+ SL+ LNL +F V ++ DL SL L L+ LE
Sbjct: 344 MVYLKNLKSLQFLNLDSCKIGDQGVQNFKNLVNLKSLDLSDSLIGNHALNFLTGLSKLES 403
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 325
LN+ T V+D L +S L L++ + +TD L L+SL+ LT+L + A +T+ G
Sbjct: 404 LNISSTMVTDMGLHKISGLTSLKSLNIDSRQITDTGLMALTSLTNLTHLDLFSARITDYG 463
Query: 326 LGSFKPPRSLKLLDLHGGWL 345
+GS + + L+ L++ GG +
Sbjct: 464 IGSLRHFKKLQSLEVCGGGI 483
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 137/294 (46%), Gaps = 24/294 (8%)
Query: 81 EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
+ + Y+ L LN+ C + SS + L+G+T L EL +SR KV D G+ L +
Sbjct: 221 DGLVYIKGLTKLEKLNLGWCNCIRSSDMKQLSGLTNLLELQISR-SKVKDFGITFLKDLK 279
Query: 141 TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 200
LE L + +T + ++ L +L+ L+L ++D R L+ L L+ L+L + V
Sbjct: 280 KLEVLNMEGCPVTFACMDTIAGLTSLTTLNLKSCYISDFGCRKLEGLGNLKNLNLSYTNV 339
Query: 201 SNRGAAVLKMFPRLSFLNL-----AWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLT 255
S+ G LK L FLNL GV N+ +L+ L+LS + + L+
Sbjct: 340 SDAGMVYLKNLKSLQFLNLDSCKIGDQGVQNFKNLVNLKSLDLSDSLIGNHALNFLTGLS 399
Query: 256 ALQNLN------------------HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 297
L++LN L+ LN++ Q++D L L++ L HL L +A +
Sbjct: 400 KLESLNISSTMVTDMGLHKISGLTSLKSLNIDSRQITDTGLMALTSLTNLTHLDLFSARI 459
Query: 298 TDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 351
TD + L KL +L + +T+ G+ S K L L+L LT+ A+
Sbjct: 460 TDYGIGSLRHFKKLQSLEVCGGGITDVGVKSLKDLTDLTYLNLSQNGQLTDQAL 513
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 142/286 (49%), Gaps = 32/286 (11%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+ +L + L LN+ C VT + + + G+T L L+L C ++D G + L + L
Sbjct: 272 ITFLKDLKKLEVLNMEGCP-VTFACMDTIAGLTSLTTLNLKSCY-ISDFGCRKLEGLGNL 329
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
+ L LS T ++ G+ L +L++L L+L + D +++ + L L+ LDL S + N
Sbjct: 330 KNLNLSYTNVSDAGMVYLKNLKSLQFLNLDSCKIGDQGVQNFKNLVNLKSLDLSDSLIGN 389
Query: 203 RGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSFIQQVGAETDLVLSLTAL 257
L +L LN++ T VT K+ ++SL+ LN+ Q +T L ++LT+L
Sbjct: 390 HALNFLTGLSKLESLNISSTMVTDMGLHKISGLTSLKSLNIDSRQI--TDTGL-MALTSL 446
Query: 258 QNLNHLERLNLEQTQ---------------------VSDATLFPLSTFKELIHLSL-RNA 295
NL HL+ + T ++D + L +L +L+L +N
Sbjct: 447 TNLTHLDLFSARITDYGIGSLRHFKKLQSLEVCGGGITDVGVKSLKDLTDLTYLNLSQNG 506
Query: 296 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 341
LTD +L LS L+KL +L++ ++ +TN+GL P ++L L L
Sbjct: 507 QLTDQALEALSGLTKLVSLNVGNSSVTNAGLQHLLPLKNLTSLALQ 552
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 117/225 (52%), Gaps = 27/225 (12%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
L+SL+++D + + AL LTG++ L+ L++S + VTD G+ + +++L+ L +
Sbjct: 377 LKSLDLSD-SLIGNHALNFLTGLSKLESLNISSTM-VTDMGLHKISGLTSLKSLNIDSRQ 434
Query: 152 LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF 211
+T G+ L+SL NL+ LDL +TD + SL+ KL+ L++ G +++ G LK
Sbjct: 435 ITDTGLMALTSLTNLTHLDLFSARITDYGIGSLRHFKKLQSLEVCGGGITDVGVKSLKDL 494
Query: 212 PRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 271
L++LNL+ Q G TD +L AL L L LN+ +
Sbjct: 495 TDLTYLNLS----------------------QNGQLTD--QALEALSGLTKLVSLNVGNS 530
Query: 272 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 316
V++A L L K L L+L++ +T ++ +L + S L NL I
Sbjct: 531 SVTNAGLQHLLPLKNLTSLALQSCKVTLWAIQKLQA-SSLPNLVI 574
>gi|46446831|ref|YP_008196.1| hypothetical protein pc1197 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400472|emb|CAF23921.1| hypothetical protein pc1197 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 666
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 109/338 (32%), Positives = 179/338 (52%), Gaps = 23/338 (6%)
Query: 30 QRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNAEAIE-LRGENSV---DAEWMAY 85
R L RL +L +++ L+ + + H ++ IE L N++ DA +A
Sbjct: 146 HRCQLNRLKDYLESTVVNALLNQTFQLAEFERIINHLSDEIEALDFFNNIYLTDAHLLA- 204
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L+ L+ +CR +T + L LT +T L+ L+LS+ +TDAG+ HL ++ L+ L
Sbjct: 205 LKNCKNLKILHFKNCRVITDAGLAHLTPLTSLQRLNLSKLWCITDAGLAHLTTLKALQHL 264
Query: 146 WLSE-TGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQ-VSN 202
LS+ + LT DG+A L+ L L L L +TD L L +LT L++LDL + +++
Sbjct: 265 DLSQCSKLTDDGLAHLTPLTALQHLGLNYCENLTDAGLAHLTLLTGLQHLDLSNCKNLTD 324
Query: 203 RGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSFIQQVGAETDLVLS-LT 255
G A L L L+L+W G+ L +++ L+ L+LS + + TD L+ LT
Sbjct: 325 AGLAHLTSLMALQHLDLSWCLKLTDAGLAHLTSLTGLQHLDLSNCKNL---TDAGLAHLT 381
Query: 256 ALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 314
+L L H LNL +++DA L L+ L HL+L +LT L L+SL+ L +L
Sbjct: 382 SLMALQH---LNLSWCLKLTDAGLAHLTPLTALQHLNLSRYNLTYAGLAHLTSLTGLQHL 438
Query: 315 SIRDA-VLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 351
+ + L ++GL +P +L+ L+L G W LT+ +
Sbjct: 439 DLSGSRKLIDAGLAHLRPLVALQHLNLTGCWKLTDAGL 476
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/305 (32%), Positives = 154/305 (50%), Gaps = 36/305 (11%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+A+L + L+ L++++C+ +T + L LT + L+ L+LS C+K+TDAG+ HL ++ L
Sbjct: 352 LAHLTSLTGLQHLDLSNCKNLTDAGLAHLTSLMALQHLNLSWCLKLTDAGLAHLTPLTAL 411
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDL-GGLPVTDLVLRSLQVLTKLEYLDLWGS-QV 200
+ L LS LT G+A L+SL L LDL G + D L L+ L L++L+L G ++
Sbjct: 412 QHLNLSRYNLTYAGLAHLTSLTGLQHLDLSGSRKLIDAGLAHLRPLVALQHLNLTGCWKL 471
Query: 201 SNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSFIQQVGAETDLVLS- 253
++ G A L L L L+W G+ L + +L+ L+LS + TD L+
Sbjct: 472 TDAGLAHLSPLKALQTLGLSWCQNLTGAGLAHLKPLVALQYLDLSNCNNL---TDAGLAH 528
Query: 254 ---LTALQNLN-------------------HLERLNLEQT-QVSDATLFPLSTFKELIHL 290
L ALQ+LN L+ LNL +++DA L L L HL
Sbjct: 529 LRPLVALQHLNLTGCWKLTDAGLAHLTSLMALQHLNLSWCLKLTDAGLAHLKPLVALQHL 588
Query: 291 SLRNA-SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTED 349
L N +LTD L L L L +L++ LT+ GL P +L+ LDL + LT+
Sbjct: 589 DLSNCNNLTDEGLTHLRPLVALQHLNLSRYNLTDDGLAHLTPLTTLQYLDLSSCYNLTDA 648
Query: 350 AILQF 354
+ F
Sbjct: 649 GLAHF 653
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 111/327 (33%), Positives = 165/327 (50%), Gaps = 45/327 (13%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
EN DA +A+L L+ L++++C+ +T + L LT + L+ LDLS C+K+TDAG+
Sbjct: 295 ENLTDAG-LAHLTLLTGLQHLDLSNCKNLTDAGLAHLTSLMALQHLDLSWCLKLTDAGLA 353
Query: 135 HLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDL--------GGL----PVTDLV- 180
HL S++ L+ L LS LT G+A L+SL L L+L GL P+T L
Sbjct: 354 HLTSLTGLQHLDLSNCKNLTDAGLAHLTSLMALQHLNLSWCLKLTDAGLAHLTPLTALQH 413
Query: 181 ------------LRSLQVLTKLEYLDLWGS-QVSNRGAAVLKMFPRLSFLNL--AW---- 221
L L LT L++LDL GS ++ + G A L+ L LNL W
Sbjct: 414 LNLSRYNLTYAGLAHLTSLTGLQHLDLSGSRKLIDAGLAHLRPLVALQHLNLTGCWKLTD 473
Query: 222 TGVTKLPNISSLECLNLSFIQQV-GAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFP 280
G+ L + +L+ L LS+ Q + GA + L ALQ L+ L N ++DA L
Sbjct: 474 AGLAHLSPLKALQTLGLSWCQNLTGAGLAHLKPLVALQYLD-LSNCN----NLTDAGLAH 528
Query: 281 LSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLL 338
L L HL+L LTD L L+SL L +L++ + LT++GL KP +L+ L
Sbjct: 529 LRPLVALQHLNLTGCWKLTDAGLAHLTSLMALQHLNLSWCLKLTDAGLAHLKPLVALQHL 588
Query: 339 DLHGGWLLTEDAILQFCKMHPRIEVWH 365
DL LT++ + + P + + H
Sbjct: 589 DLSNCNNLTDEGLTH---LRPLVALQH 612
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 145/282 (51%), Gaps = 16/282 (5%)
Query: 81 EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
+ +A+L L+ L + C +T + L LT +T L+ LDLS C +TDAG+ HL S+
Sbjct: 275 DGLAHLTPLTALQHLGLNYCENLTDAGLAHLTLLTGLQHLDLSNCKNLTDAGLAHLTSLM 334
Query: 141 TLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDL-WG 197
L+ L LS LT G+A L+SL L LDL +TD L L L L++L+L W
Sbjct: 335 ALQHLDLSWCLKLTDAGLAHLTSLTGLQHLDLSNCKNLTDAGLAHLTSLMALQHLNLSWC 394
Query: 198 SQVSNRGAAVLKMFPRLSFLNLA-----WTGVTKLPNISSLECLNLSFIQQVGAETDLVL 252
++++ G A L L LNL+ + G+ L +++ L+ L+LS G+ +
Sbjct: 395 LKLTDAGLAHLTPLTALQHLNLSRYNLTYAGLAHLTSLTGLQHLDLS-----GSRKLIDA 449
Query: 253 SLTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHLSLR-NASLTDVSLHQLSSLSK 310
L L+ L L+ LNL +++DA L LS K L L L +LT L L L
Sbjct: 450 GLAHLRPLVALQHLNLTGCWKLTDAGLAHLSPLKALQTLGLSWCQNLTGAGLAHLKPLVA 509
Query: 311 LTNLSIRDA-VLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 351
L L + + LT++GL +P +L+ L+L G W LT+ +
Sbjct: 510 LQYLDLSNCNNLTDAGLAHLRPLVALQHLNLTGCWKLTDAGL 551
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 79/149 (53%), Gaps = 3/149 (2%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ ++L N++ +A+L L+ LN+ C ++T + L LT + L+ L+LS C+K
Sbjct: 511 QYLDLSNCNNLTDAGLAHLRPLVALQHLNLTGCWKLTDAGLAHLTSLMALQHLNLSWCLK 570
Query: 128 VTDAGMKHLLSISTLEKLWLSE-TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 186
+TDAG+ HL + L+ L LS LT +G+ L L L L+L +TD L L
Sbjct: 571 LTDAGLAHLKPLVALQHLDLSNCNNLTDEGLTHLRPLVALQHLNLSRYNLTDDGLAHLTP 630
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLS 215
LT L+YLDL S N A L F ++
Sbjct: 631 LTTLQYLDL--SSCYNLTDAGLAHFKTVA 657
>gi|118483021|gb|ABK93422.1| unknown [Populus trichocarpa]
Length = 107
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 56/99 (56%), Positives = 67/99 (67%), Gaps = 1/99 (1%)
Query: 337 LLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSLRASLVKQK 396
+LDL G WLLTEDAIL FCK HP IE+ HE V+ SDQ + +P RT LR V QK
Sbjct: 1 MLDLRGCWLLTEDAILSFCKRHPLIELRHE-HVVSTSDQTARHRLTPPRTFLRPPQVNQK 59
Query: 397 QDPMPMSHSFLDQRLKYSREELLELQYSSLSLARPDDSS 435
Q+ + +S F+DQRLKY+REELL LQ+ S SL P D S
Sbjct: 60 QEKLIVSQYFIDQRLKYTREELLALQFQSSSLGSPFDKS 98
>gi|46446667|ref|YP_008032.1| hypothetical protein pc1033 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400308|emb|CAF23757.1| hypothetical protein pc1033 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 662
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 103/324 (31%), Positives = 161/324 (49%), Gaps = 42/324 (12%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ + L G ++ +A+L L+ L+++ C+ +T + L LT +T L+ L+LSRC K
Sbjct: 327 QHLGLSGCQNLTDAGLAHLTPLMGLQHLDLSGCQNLTDAGLAHLTPLTGLQHLNLSRCNK 386
Query: 128 VTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQ 185
+TDAG+ HL ++ L+ L LS LT G+A L+ L L LDL G +TD L L
Sbjct: 387 LTDAGLAHLTPLTGLQHLDLSGCQNLTDAGLAHLTPLTGLQHLDLSGCQNLTDAGLAHLT 446
Query: 186 VLTKLEYLDLWGS-QVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNL 238
LT L++L+L + ++ G A L L LNL+ G+ L +++L+ L+L
Sbjct: 447 PLTGLQHLNLCNCRKFTDNGLAHLTPLSVLQHLNLSRCNKLTDVGLAHLTPLTALQHLDL 506
Query: 239 SFIQQVGAETDLVLS-LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-- 295
S + TD+ L+ LT L +L HL ++ + +++DA L L L HL+L N
Sbjct: 507 SSCYNL---TDVGLAHLTPLTSLQHLGLISCD--KLTDAGLVHLKLLTGLQHLNLSNCKN 561
Query: 296 ------------------------SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFK 330
LTD L L+SL+ L +L +R LT++GL
Sbjct: 562 LTDAGLAHLTPLTALQYLYLNWCRKLTDAGLAHLTSLTALQHLDLRYCQNLTDAGLAHLT 621
Query: 331 PPRSLKLLDLHGGWLLTEDAILQF 354
P L+ LDL W LT+ + +F
Sbjct: 622 PLTGLRHLDLSQCWRLTKAGLARF 645
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 171/334 (51%), Gaps = 21/334 (6%)
Query: 30 QRRSLERLPAHLADSLLRHLIRRRLI---FPSLLEVFKHNAEAIELRGENSVDAEWMAYL 86
QR L L +L +++ L+ + + F ++ F + + + L + +A ++A L
Sbjct: 187 QRCQLNTLKNYLEFTVVSELLNKAFLSDEFGRIINHFSNEIKILNLPNKILNNACFLA-L 245
Query: 87 GAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLW 146
+ L+ L+ +CR +T + L LT +T L+ L L +C ++T+AG+ HL ++ L+ L
Sbjct: 246 KSCENLKVLHFKECRHLTDAGLAHLTPLTALQHLGLGQCWRLTNAGLAHLTPLTALQYLN 305
Query: 147 LSE-TGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQ-VSNR 203
LSE LT G+A L+ L L L L G +TD L L L L++LDL G Q +++
Sbjct: 306 LSEYKNLTDAGLAHLTPLTALQHLGLSGCQNLTDAGLAHLTPLMGLQHLDLSGCQNLTDA 365
Query: 204 GAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSFIQQVGAETDLVLS-LTA 256
G A L L LNL+ G+ L ++ L+ L+LS Q + TD L+ LT
Sbjct: 366 GLAHLTPLTGLQHLNLSRCNKLTDAGLAHLTPLTGLQHLDLSGCQNL---TDAGLAHLTP 422
Query: 257 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLS 315
L L HL+ + ++DA L L+ L HL+L N TD L L+ LS L +L+
Sbjct: 423 LTGLQHLDLSGCQ--NLTDAGLAHLTPLTGLQHLNLCNCRKFTDNGLAHLTPLSVLQHLN 480
Query: 316 I-RDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 348
+ R LT+ GL P +L+ LDL + LT+
Sbjct: 481 LSRCNKLTDVGLAHLTPLTALQHLDLSSCYNLTD 514
>gi|115459280|ref|NP_001053240.1| Os04g0503500 [Oryza sativa Japonica Group]
gi|113564811|dbj|BAF15154.1| Os04g0503500 [Oryza sativa Japonica Group]
gi|215678755|dbj|BAG95192.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215708842|dbj|BAG94111.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629150|gb|EEE61282.1| hypothetical protein OsJ_15365 [Oryza sativa Japonica Group]
Length = 581
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 141/300 (47%), Gaps = 40/300 (13%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+ +L R L LN+ C +T S + L+ +T L+EL LS C K++D G+ +L +S L
Sbjct: 226 LVHLKGLRKLEKLNLRYCNGITDSDMKHLSDLTNLRELQLS-CCKISDLGVSYLRGLSKL 284
Query: 143 EKLWLSETGLTA------------------------DGIALLSSLQNLSVLDLGGLPVTD 178
L L +TA +G L L L VL+LG +TD
Sbjct: 285 AHLNLEGCAVTAACLEVISGLASLVLLNLSRCGVYDEGCEHLEGLVKLKVLNLGFNYITD 344
Query: 179 LVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSL 233
L L+ L LE L+L ++ + G A LK +L L L+ T G+ L + +L
Sbjct: 345 ACLVHLKELINLECLNLDSCKIGDEGLAHLKGLLKLRSLELSDTEVGSNGLRHLSGLRNL 404
Query: 234 ECLNLSF--IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 291
+ +NLSF + +G L + LN L LNL+ Q++D L L+ L HL
Sbjct: 405 QSINLSFTLVTDIG--------LKKISGLNSLRSLNLDNRQITDNGLAALTCLTGLTHLD 456
Query: 292 LRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 351
L A +TD + L L +L + ++T++G+ + K ++L LL+L LT+ ++
Sbjct: 457 LFGARITDAGTNCLKYFKNLQSLEVCGGLITDAGVKNIKDLKALTLLNLSQNGNLTDKSL 516
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 149/310 (48%), Gaps = 27/310 (8%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N ++ + ++V AE L SL++ C ++ L L G+ L++L+L C
Sbjct: 185 NVTSLSFKKCSAVTAEGAKAFANMVNLGSLDLERCPKI-HGGLVHLKGLRKLEKLNLRYC 243
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+TD+ MKHL ++ L +L LS ++ G++ L L L+ L+L G VT L +
Sbjct: 244 NGITDSDMKHLSDLTNLRELQLSCCKISDLGVSYLRGLSKLAHLNLEGCAVTAACLEVIS 303
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSF 240
L L L+L V + G L+ +L LNL + +T L + +LECLNL
Sbjct: 304 GLASLVLLNLSRCGVYDEGCEHLEGLVKLKVLNLGFNYITDACLVHLKELINLECLNLDS 363
Query: 241 IQQVGAET-----------DLVLS--------LTALQNLNHLERLNLEQTQVSDATLFPL 281
++G E L LS L L L +L+ +NL T V+D L +
Sbjct: 364 C-KIGDEGLAHLKGLLKLRSLELSDTEVGSNGLRHLSGLRNLQSINLSFTLVTDIGLKKI 422
Query: 282 STFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 341
S L L+L N +TD L L+ L+ LT+L + A +T++G K ++L+ L++
Sbjct: 423 SGLNSLRSLNLDNRQITDNGLAALTCLTGLTHLDLFGARITDAGTNCLKYFKNLQSLEVC 482
Query: 342 GGWLLTEDAI 351
GG L+T+ +
Sbjct: 483 GG-LITDAGV 491
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 126/247 (51%), Gaps = 8/247 (3%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N + + +L L LN+ C+ + L L G+ L+ L+LS +V G+
Sbjct: 338 GFNYITDACLVHLKELINLECLNLDSCK-IGDEGLAHLKGLLKLRSLELSD-TEVGSNGL 395
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
+HL + L+ + LS T +T G+ +S L +L L+L +TD L +L LT L +L
Sbjct: 396 RHLSGLRNLQSINLSFTLVTDIGLKKISGLNSLRSLNLDNRQITDNGLAALTCLTGLTHL 455
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK--LPNISSLECLNLSFIQQVGAETDLV 251
DL+G+++++ G LK F L L + +T + NI L+ L L + Q G TD
Sbjct: 456 DLFGARITDAGTNCLKYFKNLQSLEVCGGLITDAGVKNIKDLKALTLLNLSQNGNLTDKS 515
Query: 252 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + L L LN+ ++VS++ L L + L LSL + +T + + +L L+ L
Sbjct: 516 LEL--ISRLTALVSLNVSNSRVSNSGLHHLKPLQNLRSLSLESCKVTAIEIKKL-QLAAL 572
Query: 312 TNL-SIR 317
NL S+R
Sbjct: 573 PNLVSVR 579
>gi|116310796|emb|CAH67587.1| OSIGBa0112M24.4 [Oryza sativa Indica Group]
gi|218195159|gb|EEC77586.1| hypothetical protein OsI_16540 [Oryza sativa Indica Group]
Length = 581
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 141/300 (47%), Gaps = 40/300 (13%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+ +L R L LN+ C +T S + L+ +T L+EL LS C K++D G+ +L +S L
Sbjct: 226 LVHLKGLRKLEKLNLRYCNGITDSDMKHLSDLTNLRELQLS-CCKISDLGVSYLRGLSKL 284
Query: 143 EKLWLSETGLTA------------------------DGIALLSSLQNLSVLDLGGLPVTD 178
L L +TA +G L L L VL+LG +TD
Sbjct: 285 AHLNLEGCAVTAACLEVISGLASLVLLNLSRCGVYDEGCEHLEGLVKLKVLNLGFNYITD 344
Query: 179 LVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSL 233
L L+ L LE L+L ++ + G A LK +L L L+ T G+ L + +L
Sbjct: 345 ACLVHLKELINLECLNLDSCKIGDEGLAHLKGLLKLRSLELSDTEVGSNGLRHLSGLRNL 404
Query: 234 ECLNLSF--IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 291
+ +NLSF + +G L + LN L LNL+ Q++D L L+ L HL
Sbjct: 405 QSINLSFTLVTDIG--------LKKISGLNSLRSLNLDNRQITDNGLAALTCLTGLTHLD 456
Query: 292 LRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 351
L A +TD + L L +L + ++T++G+ + K ++L LL+L LT+ ++
Sbjct: 457 LFGARITDAGTNCLKYFKNLQSLEVCGGLITDAGVKNIKDLKALTLLNLSQNGNLTDKSL 516
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 149/310 (48%), Gaps = 27/310 (8%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N ++ + ++V AE L SL++ C ++ L L G+ L++L+L C
Sbjct: 185 NVTSLSFKKCSAVTAEGAKAFANMVNLGSLDLERCPKI-HGGLVHLKGLRKLEKLNLRYC 243
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+TD+ MKHL ++ L +L LS ++ G++ L L L+ L+L G VT L +
Sbjct: 244 NGITDSDMKHLSDLTNLRELQLSCCKISDLGVSYLRGLSKLAHLNLEGCAVTAACLEVIS 303
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSF 240
L L L+L V + G L+ +L LNL + +T L + +LECLNL
Sbjct: 304 GLASLVLLNLSRCGVYDEGCEHLEGLVKLKVLNLGFNYITDACLVHLKELINLECLNLDS 363
Query: 241 IQQVGAET-----------DLVLS--------LTALQNLNHLERLNLEQTQVSDATLFPL 281
++G E L LS L L L +L+ +NL T V+D L +
Sbjct: 364 C-KIGDEGLAHLKGLLKLRSLELSDTEVGSNGLRHLSGLRNLQSINLSFTLVTDIGLKKI 422
Query: 282 STFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 341
S L L+L N +TD L L+ L+ LT+L + A +T++G K ++L+ L++
Sbjct: 423 SGLNSLRSLNLDNRQITDNGLAALTCLTGLTHLDLFGARITDAGTNCLKYFKNLQSLEVC 482
Query: 342 GGWLLTEDAI 351
GG L+T+ +
Sbjct: 483 GG-LITDAGV 491
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 126/247 (51%), Gaps = 8/247 (3%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N + + +L L LN+ C+ + L L G+ L+ L+LS +V G+
Sbjct: 338 GFNYITDACLVHLKELINLECLNLDSCK-IGDEGLAHLKGLLKLRSLELSD-TEVGSNGL 395
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
+HL + L+ + LS T +T G+ +S L +L L+L +TD L +L LT L +L
Sbjct: 396 RHLSGLRNLQSINLSFTLVTDIGLKKISGLNSLRSLNLDNRQITDNGLAALTCLTGLTHL 455
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK--LPNISSLECLNLSFIQQVGAETDLV 251
DL+G+++++ G LK F L L + +T + NI L+ L L + Q G TD
Sbjct: 456 DLFGARITDAGTNCLKYFKNLQSLEVCGGLITDAGVKNIKDLKALTLLNLSQNGNLTDKS 515
Query: 252 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + L L LN+ ++VS++ L L + L LSL + +T + + +L L+ L
Sbjct: 516 LEL--ISGLTALVSLNVSNSRVSNSGLHHLKPLQNLRSLSLESCKVTAIEIKKL-QLAAL 572
Query: 312 TNL-SIR 317
NL S+R
Sbjct: 573 PNLVSVR 579
>gi|46447144|ref|YP_008509.1| hypothetical protein pc1510 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400785|emb|CAF24234.1| hypothetical protein pc1510 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 670
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 107/300 (35%), Positives = 145/300 (48%), Gaps = 25/300 (8%)
Query: 56 FPSLLEVFKHNAEAIELRGENS--VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTG 113
F +L F + EA+ EN+ DA +A L + L+ L + C +T + L LT
Sbjct: 257 FEKILNYFSNEVEALNF-SENAHLTDAHLLA-LKTCKNLKVLYLKKCCNLTDAGLPHLTP 314
Query: 114 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG 172
+ L+ LDLS+C +TDAG+ HL + L L L E LT G+A L SL NL L+L
Sbjct: 315 LVALQYLDLSKCHNLTDAGLTHLTFLDALNYLGLGECYNLTDTGLAHLKSLINLQHLNLN 374
Query: 173 GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL---------NLAWTG 223
TD L L L L+YL+L SQ N A L L L NL TG
Sbjct: 375 NCNFTDAGLAHLTPLVTLKYLNL--SQCYNLTDAGLAHLTPLVNLQQLNLSDCTNLTDTG 432
Query: 224 VTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQ-TQVSDATLFPLS 282
+ L + +L+ LNL+ + + A L L L +L++LNL T ++DA L LS
Sbjct: 433 LAYLSPLVTLQHLNLNVCKLIDA------GLAHLTPLVNLQQLNLSYCTNLTDAGLAHLS 486
Query: 283 TFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDA-VLTNSGLGSFKPPRSLKLLDL 340
T L HL L LTD+ L L+ L L L++ LT +GL P +LK LDL
Sbjct: 487 TLVTLQHLDLDGCYKLTDIGLAHLTPLVTLKYLNLSCCHNLTGAGLAHLTPLVALKHLDL 546
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 141/290 (48%), Gaps = 28/290 (9%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N + + L N DA +A+L L+ LN++ C +T + L LT + L++L+LS C
Sbjct: 367 NLQHLNLNNCNFTDA-GLAHLTPLVTLKYLNLSQCYNLTDAGLAHLTPLVNLQQLNLSDC 425
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSL 184
+TD G+ +L + TL+ L L+ L G+A L+ L NL L+L +TD L L
Sbjct: 426 TNLTDTGLAYLSPLVTLQHLNLNVCKLIDAGLAHLTPLVNLQQLNLSYCTNLTDAGLAHL 485
Query: 185 QVLTKLEYLDLWGS-QVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQ 243
L L++LDL G ++++ G A L L +LNL+ C NL+
Sbjct: 486 STLVTLQHLDLDGCYKLTDIGLAHLTPLVTLKYLNLSC-------------CHNLT---- 528
Query: 244 VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSL 302
GA + L AL++L+ +LE DA L L+ L +L L LTD L
Sbjct: 529 -GAGLAHLTPLVALKHLDLSWNGDLE-----DAGLAHLTPLVALKYLDLSECYHLTDAGL 582
Query: 303 HQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 351
L SL L +L +R LT++G+ P +LK LDL G LT+ +
Sbjct: 583 AHLRSLVALKHLDLRGCYQLTDAGIAHLTPLVALKYLDLKGCPNLTDAGL 632
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 13/107 (12%)
Query: 40 HLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVAD 99
HL D+ L HL R L+ KH ++LRG + +A+L L+ L++
Sbjct: 576 HLTDAGLAHL--RSLV------ALKH----LDLRGCYQLTDAGIAHLTPLVALKYLDLKG 623
Query: 100 CRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLW 146
C +T + L LT + L++L+L C ++TDAG+ HL S TL ++W
Sbjct: 624 CPNLTDAGLAHLTSLIALQDLELPNCQRITDAGLAHLASSMTL-RIW 669
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+A+L + L+ L++ C ++T + + LT + LK LDL C +TDAG+ HL S+ L
Sbjct: 582 LAHLRSLVALKHLDLRGCYQLTDAGIAHLTPLVALKYLDLKGCPNLTDAGLAHLTSLIAL 641
Query: 143 EKLWLSETG-LTADGIALLSS 162
+ L L +T G+A L+S
Sbjct: 642 QDLELPNCQRITDAGLAHLAS 662
>gi|226501144|ref|NP_001141453.1| uncharacterized protein LOC100273563 [Zea mays]
gi|194704638|gb|ACF86403.1| unknown [Zea mays]
gi|414586493|tpg|DAA37064.1| TPA: regulatory subunit [Zea mays]
Length = 581
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 149/324 (45%), Gaps = 50/324 (15%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV------- 128
+ + + L F L SL++ C VT+ A + L LDL RC K+
Sbjct: 170 DQISEHGLKTLSGFSNLTSLSIKKCAAVTAEGAKAFANLVNLVNLDLERCPKINGGLIHL 229
Query: 129 -----------------TDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDL 171
TD+ MK+L ++ L +L LS ++A G++ L L L L+L
Sbjct: 230 KGLKKLEKLNLRYCNGITDSDMKYLSDLTNLRELQLSSCKISAFGVSYLRGLHKLGHLNL 289
Query: 172 GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK----- 226
G VT + L + L L L+L + + G LK +L L+L + +T
Sbjct: 290 EGCAVTAVCLEVISELASLVLLNLSRCGICDEGCENLKGLTKLKALSLGFNQITDACLIH 349
Query: 227 LPNISSLECLNLSFIQQVGAE-----------TDLVLS--------LTALQNLNHLERLN 267
L ++ +LECLNL ++G E +L LS L L L +L+ +N
Sbjct: 350 LKDLVNLECLNLDSC-KIGDEGLFHLKGLIQLKNLELSDTEVGSNGLRHLSGLRNLQSIN 408
Query: 268 LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLG 327
L T V+D L +S L L+L N +TD L L+ L+ LT+L + A +T+SG+
Sbjct: 409 LSFTLVTDIGLKKISGLSSLKSLNLDNRQITDTGLASLTGLTGLTHLDLFGARITDSGMS 468
Query: 328 SFKPPRSLKLLDLHGGWLLTEDAI 351
F+ ++++ L++ GG L+T+ +
Sbjct: 469 CFRFFKNIQSLEVCGG-LITDAGV 491
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 135/283 (47%), Gaps = 17/283 (6%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + M YL LR L ++ C+ +++ + L G+ L L+L C VT ++
Sbjct: 244 NGITDSDMKYLSDLTNLRELQLSSCK-ISAFGVSYLRGLHKLGHLNLEGCA-VTAVCLEV 301
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ +++L L LS G+ +G L L L L LG +TD L L+ L LE L+L
Sbjct: 302 ISELASLVLLNLSRCGICDEGCENLKGLTKLKALSLGFNQITDACLIHLKDLVNLECLNL 361
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSF--IQQVGAET 248
++ + G LK +L L L+ T G+ L + +L+ +NLSF + +G
Sbjct: 362 DSCKIGDEGLFHLKGLIQLKNLELSDTEVGSNGLRHLSGLRNLQSINLSFTLVTDIG--- 418
Query: 249 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 308
L + L+ L+ LNL+ Q++D L L+ L HL L A +TD +
Sbjct: 419 -----LKKISGLSSLKSLNLDNRQITDTGLASLTGLTGLTHLDLFGARITDSGMSCFRFF 473
Query: 309 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 351
+ +L + ++T++G+ + K ++L LL+L LT+ +
Sbjct: 474 KNIQSLEVCGGLITDAGVKNIKDLKALTLLNLSQNGKLTDKTL 516
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 140/290 (48%), Gaps = 32/290 (11%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
+ A ++YL L LN+ C VT+ L ++ + L L+LSRC + D G ++L
Sbjct: 270 ISAFGVSYLRGLHKLGHLNLEGCA-VTAVCLEVISELASLVLLNLSRC-GICDEGCENLK 327
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
++ L+ L L +T + L L NL L+L + D L L+ L +L+ L+L
Sbjct: 328 GLTKLKALSLGFNQITDACLIHLKDLVNLECLNLDSCKIGDEGLFHLKGLIQLKNLELSD 387
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSFIQQVGAETDLVL 252
++V + G L L +NL++T G+ K+ +SSL+ LNL Q +T L
Sbjct: 388 TEVGSNGLRHLSGLRNLQSINLSFTLVTDIGLKKISGLSSLKSLNLDNRQIT--DTGLA- 444
Query: 253 SLTALQNLNHLERLNLEQTQ---------------------VSDATLFPLSTFKELIHLS 291
SLT L L HL+ T ++DA + + K L L+
Sbjct: 445 SLTGLTGLTHLDLFGARITDSGMSCFRFFKNIQSLEVCGGLITDAGVKNIKDLKALTLLN 504
Query: 292 L-RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
L +N LTD +L +S L+ L +L++ ++ ++NSGL KP ++L+ L L
Sbjct: 505 LSQNGKLTDKTLELISGLTALVSLNVSNSRVSNSGLHHLKPLQNLRSLSL 554
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 109/228 (47%), Gaps = 26/228 (11%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
+ E + +L L++L ++D V S+ L L+G+ L+ ++LS + VTD G+K +
Sbjct: 366 IGDEGLFHLKGLIQLKNLELSD-TEVGSNGLRHLSGLRNLQSINLSFTL-VTDIGLKKIS 423
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
+S+L+ L L +T G+A L+ L L+ LDL G +TD + + ++ L++ G
Sbjct: 424 GLSSLKSLNLDNRQITDTGLASLTGLTGLTHLDLFGARITDSGMSCFRFFKNIQSLEVCG 483
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTAL 257
+++ G +K L+ LNL+ Q G TD L L +
Sbjct: 484 GLITDAGVKNIKDLKALTLLNLS----------------------QNGKLTDKTLEL--I 519
Query: 258 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 305
L L LN+ ++VS++ L L + L LSL + +T + +L
Sbjct: 520 SGLTALVSLNVSNSRVSNSGLHHLKPLQNLRSLSLESCRVTASEMDKL 567
>gi|452822896|gb|EME29911.1| leucine-rich repeat family protein [Galdieria sulphuraria]
Length = 588
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 160/331 (48%), Gaps = 28/331 (8%)
Query: 38 PAHLADSLLRHLIRRRLIFPSLLEVFK-HNAEAIELRGENSVDAEWMAYLGAFRYLRSLN 96
P L L+ +L+ R + LE + H + + V +W+ YL L L
Sbjct: 80 PRELIQRLVEYLVESRRLNCEFLETLQQHCVYRLRFTSQLQVTNDWLFYLQNLSTLSRLE 139
Query: 97 VADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWL-SETGLTAD 155
+ DC+ ++ L L + L LDL+ CV++T G++HL + L+ L L S +T++
Sbjct: 140 LKDCKFISDEGLSNLAEIVSLTYLDLAGCVQITSEGLQHLAGLKYLKVLVLKSCKQITSE 199
Query: 156 GIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPR 213
G++ L++L NL+ LD+ V+D L+SL LTKLE + W ++S+ G +L F R
Sbjct: 200 GLSYLANLHNLTRLDIEQCSEVSDSFLQSLNRLTKLEDFNCAWCFRLSDEGLTILSNFHR 259
Query: 214 LSFLNLAWTGVTK-----LPNISSLECLNLSFIQQVGAETDLVLSLTALQNLN------- 261
+ +LN++ T V++ LP + L L ++ + + L +L+ L+
Sbjct: 260 MRYLNISKTRVSQNFGRFLPGMPRLRVLKVAGTGFSDRDAQYLRGLYSLRELDVEGCSVG 319
Query: 262 -----------HLERLNLEQTQVSDATL-FPLSTFKELIHLSLRNASLTDVSLHQLSSLS 309
+ +LNL T++S+ + L +L +L+L + + D ++ LS L
Sbjct: 320 DPFLATIYALPRIRKLNLGYTKISERGVSLYLGNMLKLQYLNLDSCLIGDFAVEHLSRLE 379
Query: 310 KLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
+L L + D +++SGL SL+ L L
Sbjct: 380 QLKCLDLTDTTVSSSGLSGLANLTSLETLIL 410
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 149/340 (43%), Gaps = 49/340 (14%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ + L+ + +E ++YL L L++ C V+ S L +L +T L++ + + C +
Sbjct: 186 KVLVLKSCKQITSEGLSYLANLHNLTRLDIEQCSEVSDSFLQSLNRLTKLEDFNCAWCFR 245
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
++D G+ L + + L +S+T ++ + L + L VL + G +D + L+ L
Sbjct: 246 LSDEGLTILSNFHRMRYLNISKTRVSQNFGRFLPGMPRLRVLKVAGTGFSDRDAQYLRGL 305
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK------LPNISSLECLNL--S 239
L LD+ G V + A + PR+ LNL +T +++ L N+ L+ LNL
Sbjct: 306 YSLRELDVEGCSVGDPFLATIYALPRIRKLNLGYTKISERGVSLYLGNMLKLQYLNLDSC 365
Query: 240 FIQQVGAE-------------TDLVLS---LTALQNLNHLERLNLEQTQVSDATLFPLST 283
I E TD +S L+ L NL LE L L T VS++ L L
Sbjct: 366 LIGDFAVEHLSRLEQLKCLDLTDTTVSSSGLSGLANLTSLETLILAYTSVSNSGLEHLKN 425
Query: 284 FKELIHLSLR------------------------NASLTDVSLHQLSSLSKLTNLSIRDA 319
+L LSL A +TD L +S +S L +L +
Sbjct: 426 LTKLESLSLDTRGISDDGLAYLKKLKHLKHLDLFGAKVTDNGLRHISEISTLESLEVCAG 485
Query: 320 VLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQF-CKMH 358
+T++GL S R+L+ L+L +T+ ++ C H
Sbjct: 486 GVTDAGLESIGKLRALRTLNLSQNHRITDAGLIHLSCLSH 525
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 108/211 (51%), Gaps = 14/211 (6%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+ +L L+ L++ D V+SS L L +T L+ L L+ V+++G++HL +++ L
Sbjct: 372 VEHLSRLEQLKCLDLTD-TTVSSSGLSGLANLTSLETLILAY-TSVSNSGLEHLKNLTKL 429
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
E L L G++ DG+A L L++L LDL G VTD LR + ++ LE L++ V++
Sbjct: 430 ESLSLDTRGISDDGLAYLKKLKHLKHLDLFGAKVTDNGLRHISEISTLESLEVCAGGVTD 489
Query: 203 RGAAVLKMFPRLSFLNLAWT------GVTKLPNISSLECLNLSFIQQVGAETDLVLSLTA 256
G + L LNL+ G+ L +S L LNLS+ VG D + SL
Sbjct: 490 AGLESIGKLRALRTLNLSQNHRITDAGLIHLSCLSHLTSLNLSY-TNVG---DGICSL-- 543
Query: 257 LQNLNHLERLNLEQTQVSDATLFPLSTFKEL 287
+Q L + +E+ +S A L T + +
Sbjct: 544 VQKCPSLRMIGIERCGLSIAAKIRLRTHQRI 574
>gi|46446626|ref|YP_007991.1| hypothetical protein pc0992 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400267|emb|CAF23716.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 583
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 102/322 (31%), Positives = 159/322 (49%), Gaps = 36/322 (11%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N + + L ++ + +A+L L+ L+++DC +T L LT +T L+ LDL C
Sbjct: 252 NLKVLHLEACLAITDDGLAHLAPLVALQHLDLSDCENLTDVGLAHLTPLTALQHLDLRGC 311
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDLGGLPVTDLVLRSL 184
TDAG+ HL ++ L+ L LS D G+A L+ L L LDL G +TD L L
Sbjct: 312 Y-FTDAGLAHLTPLTALQHLNLSFCSNATDAGLAHLTPLTALQHLDLRGCYLTDAGLAHL 370
Query: 185 QVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLN 237
LT L++LDL G + +++ G A L+ L LNL W G+ L +++L+ L+
Sbjct: 371 TPLTGLQHLDLIGCKDLTDAGLAHLRPLTALQHLNLNWCRNLTDAGLAHLTPLTALQHLD 430
Query: 238 LSFIQQVGAE----------------------TDLVLS-LTALQNLNHLERLNLEQTQVS 274
LSF + + TD L+ LT L L HL LN + ++
Sbjct: 431 LSFCSNITDDGLAHLTLLTTLQHLNLSGCYKLTDAGLAHLTLLTGLQHL-NLNWYK-NLT 488
Query: 275 DATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPP 332
DA L L+ L +L+L + +LTD L L+ L+ L +L++ LT++GL
Sbjct: 489 DAGLAHLTPLAGLQYLALTDCKNLTDAGLAHLTPLTALQHLNLSGCYKLTDAGLAHLTSL 548
Query: 333 RSLKLLDLHGGWLLTEDAILQF 354
+L+ LDL LT+D + +F
Sbjct: 549 TALQYLDLSYCMNLTDDGLDRF 570
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 151/327 (46%), Gaps = 38/327 (11%)
Query: 56 FPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMT 115
F ++ F + EA++ + + L L+ L++ C +T L L +
Sbjct: 217 FEKIINHFSNEIEALDFSNNAHLTDAHLLALKNCENLKVLHLEACLAITDDGLAHLAPLV 276
Query: 116 CLKELDLSRCVKVTDAGMKHLLSISTLEKL-----WLSETGL------------------ 152
L+ LDLS C +TD G+ HL ++ L+ L + ++ GL
Sbjct: 277 ALQHLDLSDCENLTDVGLAHLTPLTALQHLDLRGCYFTDAGLAHLTPLTALQHLNLSFCS 336
Query: 153 --TADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVLK 209
T G+A L+ L L LDL G +TD L L LT L++LDL G + +++ G A L+
Sbjct: 337 NATDAGLAHLTPLTALQHLDLRGCYLTDAGLAHLTPLTGLQHLDLIGCKDLTDAGLAHLR 396
Query: 210 MFPRLSFLNLAW------TGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHL 263
L LNL W G+ L +++L+ L+LSF + + L+L +L
Sbjct: 397 PLTALQHLNLNWCRNLTDAGLAHLTPLTALQHLDLSFCSNITDDGLAHLTLLTTLQHLNL 456
Query: 264 ERLNLEQTQVSDATLFPLSTFKELIHLSLR-NASLTDVSLHQLSSLSKLTNLSIRDAV-L 321
+++DA L L+ L HL+L +LTD L L+ L+ L L++ D L
Sbjct: 457 SGC----YKLTDAGLAHLTLLTGLQHLNLNWYKNLTDAGLAHLTPLAGLQYLALTDCKNL 512
Query: 322 TNSGLGSFKPPRSLKLLDLHGGWLLTE 348
T++GL P +L+ L+L G + LT+
Sbjct: 513 TDAGLAHLTPLTALQHLNLSGCYKLTD 539
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
+N DA +A+L L+ LN++ C ++T + L LT +T L+ LDLS C+ +TD G+
Sbjct: 510 KNLTDA-GLAHLTPLTALQHLNLSGCYKLTDAGLAHLTSLTALQYLDLSYCMNLTDDGLD 568
Query: 135 HLLSIST 141
+++T
Sbjct: 569 RFKTLAT 575
>gi|195647464|gb|ACG43200.1| regulatory subunit [Zea mays]
Length = 581
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 149/324 (45%), Gaps = 50/324 (15%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV------- 128
+ + + L F L SL++ C VT+ A + L LDL RC K+
Sbjct: 170 DQISEHGLKTLSGFSNLTSLSIKKCAAVTAEGAKAFANLVNLVNLDLERCPKINGGLIHL 229
Query: 129 -----------------TDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDL 171
TD+ MK+L ++ L +L LS ++A G++ L L L L+L
Sbjct: 230 KGLKKLEKLNLRYCNGITDSDMKYLSDLTNLRELQLSSCKISAFGVSYLRGLHKLGHLNL 289
Query: 172 GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK----- 226
G VT + L + L L L+L + + G LK +L L+L + +T
Sbjct: 290 EGCAVTAVCLEVISELASLVLLNLSRCGICDEGCENLKGLTKLKALSLGFNQITDACLIH 349
Query: 227 LPNISSLECLNLSFIQQVGAE-----------TDLVLS--------LTALQNLNHLERLN 267
L ++ +LECLNL ++G E +L LS L L L +L+ +N
Sbjct: 350 LKDLVNLECLNLDSC-KIGDEGLFHLKGLIQLKNLELSDTEVGSNGLRHLSGLRNLQSIN 408
Query: 268 LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLG 327
L T V+D L +S L L+L N +TD L L+ L+ LT+L + A +T+SG+
Sbjct: 409 LSFTLVTDIGLKKISGLSSLKSLNLDNRQITDTGLASLTGLTGLTHLDLFGARITDSGMS 468
Query: 328 SFKPPRSLKLLDLHGGWLLTEDAI 351
F+ ++++ L++ GG L+T+ +
Sbjct: 469 CFRFFKNIQSLEVCGG-LITDAGV 491
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 135/283 (47%), Gaps = 17/283 (6%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + M YL LR L ++ C+ +++ + L G+ L L+L C VT ++
Sbjct: 244 NGITDSDMKYLSDLTNLRELQLSSCK-ISAFGVSYLRGLHKLGHLNLEGCA-VTAVCLEV 301
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ +++L L LS G+ +G L L L L LG +TD L L+ L LE L+L
Sbjct: 302 ISELASLVLLNLSRCGICDEGCENLKGLTKLKALSLGFNQITDACLIHLKDLVNLECLNL 361
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSF--IQQVGAET 248
++ + G LK +L L L+ T G+ L + +L+ +NLSF + +G
Sbjct: 362 DSCKIGDEGLFHLKGLIQLKNLELSDTEVGSNGLRHLSGLRNLQSINLSFTLVTDIG--- 418
Query: 249 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 308
L + L+ L+ LNL+ Q++D L L+ L HL L A +TD +
Sbjct: 419 -----LKKISGLSSLKSLNLDNRQITDTGLASLTGLTGLTHLDLFGARITDSGMSCFRFF 473
Query: 309 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 351
+ +L + ++T++G+ + K ++L LL+L LT+ +
Sbjct: 474 KNIQSLEVCGGLITDAGVKNIKDLKALTLLNLSQNGKLTDKTL 516
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 139/290 (47%), Gaps = 32/290 (11%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
+ A ++YL L LN+ C VT+ L ++ + L L+LSRC + D G ++L
Sbjct: 270 ISAFGVSYLRGLHKLGHLNLEGCA-VTAVCLEVISELASLVLLNLSRC-GICDEGCENLK 327
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
++ L+ L L +T + L L NL L+L + D L L+ L +L+ L+L
Sbjct: 328 GLTKLKALSLGFNQITDACLIHLKDLVNLECLNLDSCKIGDEGLFHLKGLIQLKNLELSD 387
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSFIQQVGAETDLVL 252
++V + G L L +NL++T G+ K+ +SSL+ LNL Q +T L
Sbjct: 388 TEVGSNGLRHLSGLRNLQSINLSFTLVTDIGLKKISGLSSLKSLNLDNRQIT--DTGLA- 444
Query: 253 SLTALQNLNHLERLNLEQTQ---------------------VSDATLFPLSTFKELIHLS 291
SLT L L HL+ T ++DA + + K L L+
Sbjct: 445 SLTGLTGLTHLDLFGARITDSGMSCFRFFKNIQSLEVCGGLITDAGVKNIKDLKALTLLN 504
Query: 292 L-RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
L +N LTD +L +S L+ L +L++ ++ ++N GL KP ++L+ L L
Sbjct: 505 LSQNGKLTDKTLELISGLTALVSLNVSNSRVSNLGLHHLKPLQNLRSLSL 554
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 108/228 (47%), Gaps = 26/228 (11%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
+ E + +L L++L ++D V S+ L L+G+ L+ ++LS + VTD G+K +
Sbjct: 366 IGDEGLFHLKGLIQLKNLELSD-TEVGSNGLRHLSGLRNLQSINLSFTL-VTDIGLKKIS 423
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
+S+L+ L L +T G+A L+ L L+ LDL G +TD + + ++ L++ G
Sbjct: 424 GLSSLKSLNLDNRQITDTGLASLTGLTGLTHLDLFGARITDSGMSCFRFFKNIQSLEVCG 483
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTAL 257
+++ G +K L+ LNL+ Q G TD L L +
Sbjct: 484 GLITDAGVKNIKDLKALTLLNLS----------------------QNGKLTDKTLEL--I 519
Query: 258 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 305
L L LN+ ++VS+ L L + L LSL + +T + +L
Sbjct: 520 SGLTALVSLNVSNSRVSNLGLHHLKPLQNLRSLSLESCRVTASEMDKL 567
>gi|46447129|ref|YP_008494.1| hypothetical protein pc1495 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400770|emb|CAF24219.1| hypothetical protein pc1495 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 559
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 100/314 (31%), Positives = 159/314 (50%), Gaps = 17/314 (5%)
Query: 56 FPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMT 115
F ++ + EA+ + + L + L+ L++ C+ +T L LT +T
Sbjct: 216 FERIINHLSNEIEALNFSNNTYLTDAHFSALKDCKNLKVLHLVSCQAITDDRLAHLTPLT 275
Query: 116 CLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGL 174
L+ L+LS+C K+TD G+ HL ++ L+ L LS LT G+A L+ L+ L L+L G
Sbjct: 276 ALQHLNLSKCRKLTDTGLVHLTPLTALQHLDLSYCKNLTDAGLAHLTPLKALQHLNLRGF 335
Query: 175 -PVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLA-W-----TGVTK 226
+TD L L LT L+YLDL W +++ G A L L LNL+ W G+ +
Sbjct: 336 GKLTDAGLVHLTPLTALQYLDLSWCKNLTDAGLAHLTPLTGLQHLNLSGWYHLTDAGLAR 395
Query: 227 LPNISSLECLNLSFIQQV-GAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFK 285
L +++L+ L+LS + + A + + SLTALQ+L +NL +DA L L+
Sbjct: 396 LIFLTALQHLDLSDCENLTSAGLERLTSLTALQHLGLSYCMNL-----TDAGLIHLTPLT 450
Query: 286 ELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGG 343
L HL+L LTD L L+ L+ L +L++ LT++GL P +L+ L+L
Sbjct: 451 ALQHLNLSGCFHLTDAGLVHLTPLTALQHLNLGGCENLTDAGLAYLTPLTALQHLNLSRC 510
Query: 344 WLLTEDAILQFCKM 357
LTE + +
Sbjct: 511 KHLTEAGLTHLASL 524
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 100/298 (33%), Positives = 151/298 (50%), Gaps = 34/298 (11%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N + + L ++ + +A+L L+ LN++ CR++T + L LT +T L+ LDLS C
Sbjct: 251 NLKVLHLVSCQAITDDRLAHLTPLTALQHLNLSKCRKLTDTGLVHLTPLTALQHLDLSYC 310
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLGGLP-VTDLVLRS 183
+TDAG+ HL + L+ L L G LT G+ L+ L L LDL +TD L
Sbjct: 311 KNLTDAGLAHLTPLKALQHLNLRGFGKLTDAGLVHLTPLTALQYLDLSWCKNLTDAGLAH 370
Query: 184 LQVLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFL------NLAWTGVTKLPNISSLECL 236
L LT L++L+L G +++ G A L L L NL G+ +L ++++L+ L
Sbjct: 371 LTPLTGLQHLNLSGWYHLTDAGLARLIFLTALQHLDLSDCENLTSAGLERLTSLTALQHL 430
Query: 237 NLSFIQQVGAETDLVLS-LTALQNLN-------------------HLERLNLEQTQ-VSD 275
LS+ + + L+ LTALQ+LN L+ LNL + ++D
Sbjct: 431 GLSYCMNLTDAGLIHLTPLTALQHLNLSGCFHLTDAGLVHLTPLTALQHLNLGGCENLTD 490
Query: 276 ATLFPLSTFKELIHLSL-RNASLTDVSLHQLSSLSKLT--NLSIRDAVLTNSGLGSFK 330
A L L+ L HL+L R LT+ L L+SL+ L NLS D LT++GL FK
Sbjct: 491 AGLAYLTPLTALQHLNLSRCKHLTEAGLTHLASLTALQHLNLSYCDN-LTDAGLERFK 547
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 40 HLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRG-ENSVDAEWMAYLGAFRYLRSLNVA 98
HL S HL L+ + L +H + L G EN DA +AYL L+ LN++
Sbjct: 454 HLNLSGCFHLTDAGLVHLTPLTALQH----LNLGGCENLTDA-GLAYLTPLTALQHLNLS 508
Query: 99 DCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
C+ +T + L L +T L+ L+LS C +TDAG++
Sbjct: 509 RCKHLTEAGLTHLASLTALQHLNLSYCDNLTDAGLE 544
>gi|357478391|ref|XP_003609481.1| F-box/LRR-repeat protein [Medicago truncatula]
gi|355510536|gb|AES91678.1| F-box/LRR-repeat protein [Medicago truncatula]
Length = 576
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 150/328 (45%), Gaps = 39/328 (11%)
Query: 55 IFPSLLEVFKH--NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALT 112
+ P + F + N E ++L + + ++ + G + L SLN+ C+ VT S + A++
Sbjct: 192 VTPDGMRAFSNLVNLEKLDLERCSDIHGGFVHFKG-LKKLESLNIGCCKCVTDSDMKAIS 250
Query: 113 GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL-------------WLS----------- 148
G LKEL +S +TD G+ +L + L L ++S
Sbjct: 251 GFINLKELQISN-SSITDLGISYLRGLQKLSTLNVEGCSITAACFEYISALAALACLNLN 309
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
GL+ DG S L L L L +TD L L+ LTKLEYL+L Q+ + G L
Sbjct: 310 RCGLSDDGFEKFSGLTGLKRLSLAFNKITDACLVHLKGLTKLEYLNLDSCQIGDEGLVNL 369
Query: 209 KMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHL 263
L L L+ T G+ + ++ LE LNLSF +L LT +L
Sbjct: 370 TGLTLLKSLVLSDTEVGNSGIRYISGLNKLEDLNLSFTSVTDNGLKRLLGLT------NL 423
Query: 264 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
+ LNL+ Q++DA L L++ LI L L A +TD L S L +L I +LT+
Sbjct: 424 KSLNLDARQITDAGLANLTSLSGLITLDLFGARITDSGTTYLRSFKNLQSLEICGGLLTD 483
Query: 324 SGLGSFKPPRSLKLLDLHGGWLLTEDAI 351
+G+ + + SL L+L LT+ +
Sbjct: 484 AGVKNIREIVSLTQLNLSQNCKLTDKTL 511
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 117/237 (49%), Gaps = 12/237 (5%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + + +L L LN+ C+ + L LTG+T LK L LS +V ++G+++
Sbjct: 335 NKITDACLVHLKGLTKLEYLNLDSCQ-IGDEGLVNLTGLTLLKSLVLSD-TEVGNSGIRY 392
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ ++ LE L LS T +T +G+ L L NL L+L +TD L +L L+ L LDL
Sbjct: 393 ISGLNKLEDLNLSFTSVTDNGLKRLLGLTNLKSLNLDARQITDAGLANLTSLSGLITLDL 452
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAW-----TGVTKLPNISSLECLNLSFIQQVGAETDL 250
+G+++++ G L+ F L L + GV + I SL LNLS Q TD
Sbjct: 453 FGARITDSGTTYLRSFKNLQSLEICGGLLTDAGVKNIREIVSLTQLNLS---QNCKLTDK 509
Query: 251 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 307
L L + + L LN+ ++V++ L L K L LSL + + + +L S
Sbjct: 510 TLEL--ISGMTALRSLNVSNSRVTNEGLRYLKPLKNLRTLSLESCKVNAADIKKLHS 564
>gi|242076388|ref|XP_002448130.1| hypothetical protein SORBIDRAFT_06g021780 [Sorghum bicolor]
gi|241939313|gb|EES12458.1| hypothetical protein SORBIDRAFT_06g021780 [Sorghum bicolor]
Length = 581
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 147/324 (45%), Gaps = 50/324 (15%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV------- 128
+ + + L F L SL++ C VT+ A + L LDL RC K+
Sbjct: 170 DKISEHGLKTLSGFSNLTSLSIKKCAAVTAEGAKAFANLVNLVNLDLERCPKIHGGLIHL 229
Query: 129 -----------------TDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDL 171
TD+ MK+L ++ L +L LS ++ G++ L L L L+L
Sbjct: 230 KGLKKLEKLNMRYCNCITDSDMKYLSDLTNLRELQLSSCKISDFGVSYLRGLHKLGHLNL 289
Query: 172 GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----K 226
G VT L + L L L+L + + G L+ +L LNL + +T
Sbjct: 290 EGCSVTAACLEVISELASLVLLNLSRCGICDEGCENLEGLTKLKALNLGFNHITGACLIH 349
Query: 227 LPNISSLECLNLSFIQQVGAE-----------TDLVLS--------LTALQNLNHLERLN 267
L ++ SLECLNL ++G E L LS L L L +L+ +N
Sbjct: 350 LKDLISLECLNLDSC-KIGDEGLFHLKGLIQLKSLELSDTEVGSNGLRHLSGLRNLQSIN 408
Query: 268 LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLG 327
L T V+D L +S L L+L N +TD L L++L+ LT+L + A +T+SG+
Sbjct: 409 LSFTLVTDIGLKKISGLSSLKSLNLDNRQITDTGLASLTNLTGLTHLDLFGARITDSGMN 468
Query: 328 SFKPPRSLKLLDLHGGWLLTEDAI 351
F+ ++L+ L++ GG L+T+ +
Sbjct: 469 CFRFFKNLQSLEVCGG-LITDAGV 491
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 138/288 (47%), Gaps = 17/288 (5%)
Query: 71 ELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTD 130
+R N + M YL LR L ++ C+ ++ + L G+ L L+L C VT
Sbjct: 239 NMRYCNCITDSDMKYLSDLTNLRELQLSSCK-ISDFGVSYLRGLHKLGHLNLEGC-SVTA 296
Query: 131 AGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKL 190
A ++ + +++L L LS G+ +G L L L L+LG +T L L+ L L
Sbjct: 297 ACLEVISELASLVLLNLSRCGICDEGCENLEGLTKLKALNLGFNHITGACLIHLKDLISL 356
Query: 191 EYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSF--IQQ 243
E L+L ++ + G LK +L L L+ T G+ L + +L+ +NLSF +
Sbjct: 357 ECLNLDSCKIGDEGLFHLKGLIQLKSLELSDTEVGSNGLRHLSGLRNLQSINLSFTLVTD 416
Query: 244 VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLH 303
+G L + L+ L+ LNL+ Q++D L L+ L HL L A +TD ++
Sbjct: 417 IG--------LKKISGLSSLKSLNLDNRQITDTGLASLTNLTGLTHLDLFGARITDSGMN 468
Query: 304 QLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 351
L +L + ++T++G+ + K ++L LL+L LT+ +
Sbjct: 469 CFRFFKNLQSLEVCGGLITDAGVKNIKDLKALTLLNLSQNGNLTDKTL 516
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 142/285 (49%), Gaps = 32/285 (11%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
++YL L LN+ C VT++ L ++ + L L+LSRC + D G ++L ++ L
Sbjct: 275 VSYLRGLHKLGHLNLEGCS-VTAACLEVISELASLVLLNLSRC-GICDEGCENLEGLTKL 332
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
+ L L +T + L L +L L+L + D L L+ L +L+ L+L ++V +
Sbjct: 333 KALNLGFNHITGACLIHLKDLISLECLNLDSCKIGDEGLFHLKGLIQLKSLELSDTEVGS 392
Query: 203 RGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSFIQQVGAETDLVLSLTAL 257
G L L +NL++T G+ K+ +SSL+ LNL Q +T L SLT L
Sbjct: 393 NGLRHLSGLRNLQSINLSFTLVTDIGLKKISGLSSLKSLNLDNRQIT--DTGLA-SLTNL 449
Query: 258 QNLNHLERL----------------NLEQTQV-----SDATLFPLSTFKELIHLSL-RNA 295
L HL+ NL+ +V +DA + + K L L+L +N
Sbjct: 450 TGLTHLDLFGARITDSGMNCFRFFKNLQSLEVCGGLITDAGVKNIKDLKALTLLNLSQNG 509
Query: 296 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
+LTD +L +S L+ L +L++ ++ ++NSGL KP +L+ L L
Sbjct: 510 NLTDKTLELISGLTALVSLNVSNSRVSNSGLHHLKPLLNLRSLSL 554
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 109/228 (47%), Gaps = 26/228 (11%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
+ E + +L L+SL ++D V S+ L L+G+ L+ ++LS + VTD G+K +
Sbjct: 366 IGDEGLFHLKGLIQLKSLELSD-TEVGSNGLRHLSGLRNLQSINLSFTL-VTDIGLKKIS 423
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
+S+L+ L L +T G+A L++L L+ LDL G +TD + + L+ L++ G
Sbjct: 424 GLSSLKSLNLDNRQITDTGLASLTNLTGLTHLDLFGARITDSGMNCFRFFKNLQSLEVCG 483
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTAL 257
+++ G +K L+ LNL+ Q G TD L L +
Sbjct: 484 GLITDAGVKNIKDLKALTLLNLS----------------------QNGNLTDKTLEL--I 519
Query: 258 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 305
L L LN+ ++VS++ L L L LSL + +T + +L
Sbjct: 520 SGLTALVSLNVSNSRVSNSGLHHLKPLLNLRSLSLESCRVTASEIDKL 567
>gi|168701673|ref|ZP_02733950.1| leucine-rich repeat domain protein [Gemmata obscuriglobus UQM 2246]
Length = 367
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/243 (34%), Positives = 123/243 (50%), Gaps = 13/243 (5%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
VT + + L G+ L LDL+ VTDAGMK L +++ L L LS G+T G+ L++
Sbjct: 85 VTDAGVKELAGLKGLTTLDLN-STSVTDAGMKELAALNNLTTLRLSGKGVTDAGLKELAA 143
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT 222
L+ L+ LDL VTD L+ L L L + L ++V++ G L +L+ L+L+ T
Sbjct: 144 LKKLANLDLSHTKVTDAGLKELAALKGLTTIRLNNTEVTDAGLKELAALKKLADLDLSQT 203
Query: 223 GVT-----KLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDAT 277
VT +L + L CL L + A L L LN L L+L T V+DA
Sbjct: 204 KVTDAGLKELAALKGLTCLGLLGTKVTDA------GLKELAGLN-LTDLHLAGTPVTDAG 256
Query: 278 LFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKL 337
L L+ K L HL L +T V L +LS L LT L + + +T++G+ + L
Sbjct: 257 LKELAALKNLTHLYLFGTKVTGVGLKELSGLKGLTTLYLNNTKVTDAGVKELSGLKGLTT 316
Query: 338 LDL 340
LDL
Sbjct: 317 LDL 319
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 129/252 (51%), Gaps = 8/252 (3%)
Query: 77 SVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHL 136
SV M L A L +L ++ + VT + L L + L LDLS KVTDAG+K L
Sbjct: 108 SVTDAGMKELAALNNLTTLRLSG-KGVTDAGLKELAALKKLANLDLSH-TKVTDAGLKEL 165
Query: 137 LSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLW 196
++ L + L+ T +T G+ L++L+ L+ LDL VTD L+ L L L L L
Sbjct: 166 AALKGLTTIRLNNTEVTDAGLKELAALKKLADLDLSQTKVTDAGLKELAALKGLTCLGLL 225
Query: 197 GSQVSNRGAAVLKMFPRLSFLNLAWTGVTK--LPNISSLECLNLSFIQQVGAETDLVLSL 254
G++V++ G L L+ L+LA T VT L +++L+ NL+ + G + V L
Sbjct: 226 GTKVTDAGLKELAGL-NLTDLHLAGTPVTDAGLKELAALK--NLTHLYLFGTKVTGV-GL 281
Query: 255 TALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 314
L L L L L T+V+DA + LS K L L L +TD + L+ L LTNL
Sbjct: 282 KELSGLKGLTTLYLNNTKVTDAGVKELSGLKGLTTLDLSYTEMTDAGVKALAGLKGLTNL 341
Query: 315 SIRDAVLTNSGL 326
+ +T++G+
Sbjct: 342 ELYGTKVTDAGV 353
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 108/221 (48%), Gaps = 12/221 (5%)
Query: 127 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 186
+VTD G+K L + L L L T +T G+ L+ L+ L+ LDL VTD ++ L
Sbjct: 60 RVTDKGLKELAGLKNLTHLNLFSTWVTDAGVKELAGLKGLTTLDLNSTSVTDAGMKELAA 119
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSFI 241
L L L L G V++ G L +L+ L+L+ T VT +L + L + L+
Sbjct: 120 LNNLTTLRLSGKGVTDAGLKELAALKKLANLDLSHTKVTDAGLKELAALKGLTTIRLNNT 179
Query: 242 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 301
+ A L L L L L+L QT+V+DA L L+ K L L L +TD
Sbjct: 180 EVTDA------GLKELAALKKLADLDLSQTKVTDAGLKELAALKGLTCLGLLGTKVTDAG 233
Query: 302 LHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 342
L +L+ L+ LT+L + +T++GL ++L L L G
Sbjct: 234 LKELAGLN-LTDLHLAGTPVTDAGLKELAALKNLTHLYLFG 273
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 123/245 (50%), Gaps = 9/245 (3%)
Query: 65 HNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSR 124
+N + L G+ DA + L A + L +L+++ + VT + L L + L + L+
Sbjct: 121 NNLTTLRLSGKGVTDA-GLKELAALKKLANLDLSHTK-VTDAGLKELAALKGLTTIRLNN 178
Query: 125 CVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL 184
+VTDAG+K L ++ L L LS+T +T G+ L++L+ L+ L L G VTD L+ L
Sbjct: 179 -TEVTDAGLKELAALKKLADLDLSQTKVTDAGLKELAALKGLTCLGLLGTKVTDAGLKEL 237
Query: 185 QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK--LPNISSLECLNLSFIQ 242
L L L L G+ V++ G L L+ L L T VT L +S L+ L ++
Sbjct: 238 AGL-NLTDLHLAGTPVTDAGLKELAALKNLTHLYLFGTKVTGVGLKELSGLKGLTTLYLN 296
Query: 243 QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 302
V L+ L+ L L+ L T+++DA + L+ K L +L L +TD +
Sbjct: 297 NTKVTDAGVKELSGLKGLTTLD---LSYTEMTDAGVKALAGLKGLTNLELYGTKVTDAGV 353
Query: 303 HQLSS 307
+L+S
Sbjct: 354 KELNS 358
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 100/203 (49%), Gaps = 14/203 (6%)
Query: 144 KLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNR 203
K++LS T +T G+ L+ L+NL+ L+L VTD ++ L L L LDL + V++
Sbjct: 53 KVYLSFTRVTDKGLKELAGLKNLTHLNLFSTWVTDAGVKELAGLKGLTTLDLNSTSVTDA 112
Query: 204 GAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSFIQQVGAETDLVLSLTALQ 258
G L L+ L L+ GVT +L + L L+LS + A L L
Sbjct: 113 GMKELAALNNLTTLRLSGKGVTDAGLKELAALKKLANLDLSHTKVTDA------GLKELA 166
Query: 259 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 318
L L + L T+V+DA L L+ K+L L L +TD L +L++L LT L +
Sbjct: 167 ALKGLTTIRLNNTEVTDAGLKELAALKKLADLDLSQTKVTDAGLKELAALKGLTCLGLLG 226
Query: 319 AVLTNSGLGSFKPPRSLKLLDLH 341
+T++GL K L L DLH
Sbjct: 227 TKVTDAGL---KELAGLNLTDLH 246
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 67/136 (49%), Gaps = 6/136 (4%)
Query: 88 AFRYLRSLNVADCR----RVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLE 143
+ L LN+ D VT + L L + L L L KVT G+K L + L
Sbjct: 233 GLKELAGLNLTDLHLAGTPVTDAGLKELAALKNLTHLYL-FGTKVTGVGLKELSGLKGLT 291
Query: 144 KLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNR 203
L+L+ T +T G+ LS L+ L+ LDL +TD +++L L L L+L+G++V++
Sbjct: 292 TLYLNNTKVTDAGVKELSGLKGLTTLDLSYTEMTDAGVKALAGLKGLTNLELYGTKVTDA 351
Query: 204 GAAVLK-MFPRLSFLN 218
G L P+ LN
Sbjct: 352 GVKELNSALPKCKILN 367
Score = 38.1 bits (87), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%)
Query: 265 RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS 324
++ L T+V+D L L+ K L HL+L + +TD + +L+ L LT L + +T++
Sbjct: 53 KVYLSFTRVTDKGLKELAGLKNLTHLNLFSTWVTDAGVKELAGLKGLTTLDLNSTSVTDA 112
Query: 325 GLGSFKPPRSLKLLDLHG 342
G+ +L L L G
Sbjct: 113 GMKELAALNNLTTLRLSG 130
>gi|46447626|ref|YP_008991.1| hypothetical protein pc1992 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401267|emb|CAF24716.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 537
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 95/279 (34%), Positives = 142/279 (50%), Gaps = 20/279 (7%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N + + L+ ++ +A+L LR L+++ CR +T + L LT + L+ LDLS C
Sbjct: 265 NLKMLNLKSCKNLTDAGLAHLTPLTALRRLDLSFCRNLTDAGLANLTPLIALQHLDLSWC 324
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLGGL-PVTDLVLRS 183
+TDAG+ HL + L L LS G LT G+A L+ L +L L+L ++D L
Sbjct: 325 KNLTDAGLAHLTPLGALHYLDLSICGKLTDAGLAHLTPLVDLQHLNLRYCQKLSDAGLAH 384
Query: 184 LQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFL------NLAWTGVTKLPNISSLECL 236
L+ L L++LDL + +++ G A L L L NL G+ L + +L+ L
Sbjct: 385 LRSLVTLQHLDLSYCQNLTDAGLAHLARLTALQHLSLNRCKNLTEAGLVHLRPLVTLQHL 444
Query: 237 NLSFIQQVGAET-DLVLSLTALQ--NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 293
+LS+ Q++ + L SLTALQ NLNH ++L +DA L LS L HL L
Sbjct: 445 DLSYCQKLTNDGLGLFKSLTALQYLNLNHCQKL-------TDAGLAHLSPLGALQHLDLW 497
Query: 294 NASLTDVSLHQLSSLSKLTNLSI-RDAVLTNSGLGSFKP 331
++TD L L L L L + R LT++GL P
Sbjct: 498 CTNITDAGLAHLKPLGALQYLGLSRCTNLTDAGLAHLSP 536
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 132/283 (46%), Gaps = 39/283 (13%)
Query: 80 AEWMAYLGAF-RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLS 138
AE+ L F + LN +D +T + L AL LK L+L C +TDAG+ HL
Sbjct: 228 AEFEKILKHFSNEIEELNFSDNVYLTDAYLLALKDCKNLKMLNLKSCKNLTDAGLAHLTP 287
Query: 139 ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL-WG 197
++ L +L LS +NL TD L +L L L++LDL W
Sbjct: 288 LTALRRLDLSFC-------------RNL----------TDAGLANLTPLIALQHLDLSWC 324
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSFIQQVGAETDLV 251
+++ G A L L +L+L+ G+ L + L+ LNL + Q++
Sbjct: 325 KNLTDAGLAHLTPLGALHYLDLSICGKLTDAGLAHLTPLVDLQHLNLRYCQKLSDA---- 380
Query: 252 LSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTFKELIHLSL-RNASLTDVSLHQLSSLS 309
L L++L L+ L+L Q ++DA L L+ L HLSL R +LT+ L L L
Sbjct: 381 -GLAHLRSLVTLQHLDLSYCQNLTDAGLAHLARLTALQHLSLNRCKNLTEAGLVHLRPLV 439
Query: 310 KLTNLSIRDA-VLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 351
L +L + LTN GLG FK +L+ L+L+ LT+ +
Sbjct: 440 TLQHLDLSYCQKLTNDGLGLFKSLTALQYLNLNHCQKLTDAGL 482
>gi|356519278|ref|XP_003528300.1| PREDICTED: F-box/LRR-repeat protein 14-like isoform 2 [Glycine max]
Length = 529
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 140/291 (48%), Gaps = 12/291 (4%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N ++ R +S+ A+ M+ L L++ C + L L G+T L+ L+L C
Sbjct: 181 NLTSLSFRRNDSISAQGMSAFSGLVNLVKLDLERCPGI-HGGLVHLRGLTKLESLNLKWC 239
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+TD MK L +++L+ L +S + +T GI+ L LQ L++L+L G VT L SL
Sbjct: 240 NCITDYDMKPLSELASLKSLEISSSKVTDFGISFLKGLQKLALLNLEGCLVTAACLDSLA 299
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSF 240
L L L+L +S+ G + L LNL + +T L ++ LE LNL
Sbjct: 300 ELPALSNLNLNRCNLSDNGCKKISRLENLKVLNLGFNVITDACLVHLKGLTKLESLNLDS 359
Query: 241 IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 300
++G E +++L L+ LN LE L T+V L LS L L L A +TD
Sbjct: 360 C-KIGDEG--LVNLAGLEQLNCLE---LSDTEVGSNGLHHLSGLTGLTDLDLFGARITDF 413
Query: 301 SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 351
+ L L +L I VLT++G+ + K SL L+L LT+ +
Sbjct: 414 GTNYLKKFKNLRSLEICGGVLTDAGVKNIKELSSLVCLNLSQNSNLTDKTL 464
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 167/394 (42%), Gaps = 71/394 (18%)
Query: 9 LVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNA- 67
L+ LCI+ + E + K+ + LP ++ + +L+ R + + LE F+ A
Sbjct: 55 LLDLCIQ---KINEDIDKYN----TFSMLPRDISQLIFNNLVYSRRLTSASLEAFRDCAL 107
Query: 68 EAIELRGENSVDAEWMA-------------------------YLGAFRYLRSLNVADC-- 100
+ + L + V+ WM YL L SLN+ C
Sbjct: 108 QDLYLGEYDGVNDNWMGVISSQGSSLLSVDLSGSDVTDFGLTYLKDCESLISLNLNYCDQ 167
Query: 101 --------------------RR---VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
RR +++ + A +G+ L +LDL RC + G+ HL
Sbjct: 168 ISDRGLECISGLSNLTSLSFRRNDSISAQGMSAFSGLVNLVKLDLERCPGI-HGGLVHLR 226
Query: 138 SISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLW 196
++ LE L L D + LS L +L L++ VTD + L+ L KL L+L
Sbjct: 227 GLTKLESLNLKWCNCITDYDMKPLSELASLKSLEISSSKVTDFGISFLKGLQKLALLNLE 286
Query: 197 GSQVSNRGAAVLKMFPRLSFL-----NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLV 251
G V+ L P LS L NL+ G K+ + +L+ LNL F A
Sbjct: 287 GCLVTAACLDSLAELPALSNLNLNRCNLSDNGCKKISRLENLKVLNLGFNVITDA----- 341
Query: 252 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L+ L LE LNL+ ++ D L L+ ++L L L + + LH LS L+ L
Sbjct: 342 -CLVHLKGLTKLESLNLDSCKIGDEGLVNLAGLEQLNCLELSDTEVGSNGLHHLSGLTGL 400
Query: 312 TNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 345
T+L + A +T+ G K ++L+ L++ GG L
Sbjct: 401 TDLDLFGARITDFGTNYLKKFKNLRSLEICGGVL 434
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 68/149 (45%), Gaps = 3/149 (2%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
+ E + L L L ++D V S+ L L+G+T L +LDL ++TD G +L
Sbjct: 362 IGDEGLVNLAGLEQLNCLELSD-TEVGSNGLHHLSGLTGLTDLDLFG-ARITDFGTNYLK 419
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLG-GLPVTDLVLRSLQVLTKLEYLDLW 196
L L + LT G+ + L +L L+L +TD L + LT L L++
Sbjct: 420 KFKNLRSLEICGGVLTDAGVKNIKELSSLVCLNLSQNSNLTDKTLELISGLTGLVSLNVS 479
Query: 197 GSQVSNRGAAVLKMFPRLSFLNLAWTGVT 225
S+++N G LK L L L VT
Sbjct: 480 NSRITNAGLQHLKTLKNLRSLTLESCKVT 508
>gi|449436168|ref|XP_004135866.1| PREDICTED: F-box/LRR-repeat protein 14-like [Cucumis sativus]
gi|449509305|ref|XP_004163550.1| PREDICTED: F-box/LRR-repeat protein 14-like [Cucumis sativus]
Length = 578
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 102/322 (31%), Positives = 150/322 (46%), Gaps = 37/322 (11%)
Query: 60 LEVFKHNAEAIELRGENSVDAEW-MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLK 118
+ VF H I L E + +L R L SLN+ C +T S + L+G+T LK
Sbjct: 199 MSVFAHLVNLIRLDLEKCPGIHGGLVHLQGLRKLESLNIKWCNCITDSDIKPLSGLTNLK 258
Query: 119 ELDLSRCVKVTDAGMKHLL------------------------SISTLEKLWLSETGLTA 154
L +S C KVTDAG+ +L ++ L+ L LS +T
Sbjct: 259 GLQIS-CSKVTDAGIAYLKGLHKLSLLNLEGCPVTAACLYTLSALGALQYLNLSRCHITD 317
Query: 155 DGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRL 214
DG S L L +L+LG +TD L L+ LT LE L+L ++ + G LK RL
Sbjct: 318 DGSEQFSGLGALKILNLGFNDITDECLVHLKGLTNLESLNLDSCRIEDDGLVNLKALHRL 377
Query: 215 SFLNLAWT-----GVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L L+ T G+ L + +LE LNLSF TD+ L + + L+ LNL+
Sbjct: 378 KCLELSDTDVGSNGLRHLSGLFNLEKLNLSFT----VVTDIGLKKLSGLSS--LKSLNLD 431
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 329
Q++D L L+ L HL L A +TD + L + L +L I LT++G+ +
Sbjct: 432 TRQITDIGLASLTGLVGLTHLDLFGARITDSGTNYLRNFKNLQSLEICGGGLTDAGVKNI 491
Query: 330 KPPRSLKLLDLHGGWLLTEDAI 351
K SL +L+L LT+ ++
Sbjct: 492 KDLSSLMVLNLSQNGNLTDKSL 513
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 146/303 (48%), Gaps = 30/303 (9%)
Query: 69 AIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV 128
++ R + + A+ M+ L L++ C + L L G+ L+ L++ C +
Sbjct: 185 SLSFRKNSEITAQGMSVFAHLVNLIRLDLEKCPGI-HGGLVHLQGLRKLESLNIKWCNCI 243
Query: 129 TDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLT 188
TD+ +K L ++ L+ L +S + +T GIA L L LS+L+L G PVT L +L L
Sbjct: 244 TDSDIKPLSGLTNLKGLQISCSKVTDAGIAYLKGLHKLSLLNLEGCPVTAACLYTLSALG 303
Query: 189 KLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSFIQQ 243
L+YL+L +++ G+ L LNL + +T L +++LE LNL +
Sbjct: 304 ALQYLNLSRCHITDDGSEQFSGLGALKILNLGFNDITDECLVHLKGLTNLESLNLDSCR- 362
Query: 244 VGAETDLVLSLTALQNLN---------------------HLERLNLEQTQVSDATLFPLS 282
E D +++L AL L +LE+LNL T V+D L LS
Sbjct: 363 --IEDDGLVNLKALHRLKCLELSDTDVGSNGLRHLSGLFNLEKLNLSFTVVTDIGLKKLS 420
Query: 283 TFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 342
L L+L +TD+ L L+ L LT+L + A +T+SG + ++L+ L++ G
Sbjct: 421 GLSSLKSLNLDTRQITDIGLASLTGLVGLTHLDLFGARITDSGTNYLRNFKNLQSLEICG 480
Query: 343 GWL 345
G L
Sbjct: 481 GGL 483
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 121/239 (50%), Gaps = 12/239 (5%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N + E + +L L SLN+ CR + L L + LK L+LS V G+
Sbjct: 335 GFNDITDECLVHLKGLTNLESLNLDSCR-IEDDGLVNLKALHRLKCLELSD-TDVGSNGL 392
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
+HL + LEKL LS T +T G+ LS L +L L+L +TD+ L SL L L +L
Sbjct: 393 RHLSGLFNLEKLNLSFTVVTDIGLKKLSGLSSLKSLNLDTRQITDIGLASLTGLVGLTHL 452
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSFIQQVGAET 248
DL+G+++++ G L+ F L L + G+T + ++SSL LNLS Q G T
Sbjct: 453 DLFGARITDSGTNYLRNFKNLQSLEICGGGLTDAGVKNIKDLSSLMVLNLS---QNGNLT 509
Query: 249 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 307
D L L + L L LN+ ++++ A L L T K L L+L ++ + +L S
Sbjct: 510 DKSLEL--ISGLTGLVSLNISNSRITSAGLRHLKTLKNLKQLTLEACRVSASDIKKLQS 566
>gi|115447277|ref|NP_001047418.1| Os02g0613200 [Oryza sativa Japonica Group]
gi|47497632|dbj|BAD19701.1| leucine-rich repeat-like protein [Oryza sativa Japonica Group]
gi|113536949|dbj|BAF09332.1| Os02g0613200 [Oryza sativa Japonica Group]
gi|125582867|gb|EAZ23798.1| hypothetical protein OsJ_07510 [Oryza sativa Japonica Group]
gi|215704406|dbj|BAG93840.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 582
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 152/310 (49%), Gaps = 27/310 (8%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N ++ + + + AE M L +L++ C ++ L L G+ L+ L++ C
Sbjct: 186 NLTSLSFKSSDGITAEAMEAFANLVNLVNLDLERCLKI-HGGLVHLKGLRNLESLNMRYC 244
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+ D+ +K+L ++ L++L L+ +T G++ L L L+ L+L G PVT L ++
Sbjct: 245 NNIADSDIKYLSDLTNLKELQLACCRITDLGVSYLRGLSKLTQLNLEGCPVTAACLEAIS 304
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSF 240
L L L+L + G + +L LNL + +T L + +LE LNL
Sbjct: 305 GLASLVVLNLSRCGIYGEGCENFQGLKKLKVLNLGFNNITDDCLAHLKELINLESLNLDS 364
Query: 241 IQQVGAE----------------TDLVLSLTALQNLN---HLERLNLEQTQVSDATLFPL 281
+VG E +D + + LQ+L+ +LE +NL T V+D + +
Sbjct: 365 C-KVGDEGLLHLRGLMLLKSLELSDTEVGSSGLQHLSGLRNLESINLSFTLVTDTGMKKI 423
Query: 282 STFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 341
S L ++L N +TDV L L+SL+ LT+L + A +T+ G F+ ++L+ L++
Sbjct: 424 SALNSLKSVNLDNRQITDVGLAALTSLTGLTHLDLFGARITDYGTSCFRFFKNLESLEVC 483
Query: 342 GGWLLTEDAI 351
GG L+T+ +
Sbjct: 484 GG-LITDAGV 492
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 144/293 (49%), Gaps = 17/293 (5%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N E++ +R N++ + YL L+ L +A C R+T + L G++ L +L+L C
Sbjct: 235 NLESLNMRYCNNIADSDIKYLSDLTNLKELQLA-CCRITDLGVSYLRGLSKLTQLNLEGC 293
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
VT A ++ + +++L L LS G+ +G L+ L VL+LG +TD L L+
Sbjct: 294 -PVTAACLEAISGLASLVVLNLSRCGIYGEGCENFQGLKKLKVLNLGFNNITDDCLAHLK 352
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSF 240
L LE L+L +V + G L+ L L L+ T G+ L + +LE +NLSF
Sbjct: 353 ELINLESLNLDSCKVGDEGLLHLRGLMLLKSLELSDTEVGSSGLQHLSGLRNLESINLSF 412
Query: 241 --IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLT 298
+ G + + LN L+ +NL+ Q++D L L++ L HL L A +T
Sbjct: 413 TLVTDTG--------MKKISALNSLKSVNLDNRQITDVGLAALTSLTGLTHLDLFGARIT 464
Query: 299 DVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 351
D L +L + ++T++G+ + K ++LK L+L LT+ +
Sbjct: 465 DYGTSCFRFFKNLESLEVCGGLITDAGVKNIKDLKALKQLNLSQNVNLTDKTL 517
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 127/239 (53%), Gaps = 12/239 (5%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N++ + +A+L L SLN+ C+ V L L G+ LK L+LS +V +G+
Sbjct: 339 GFNNITDDCLAHLKELINLESLNLDSCK-VGDEGLLHLRGLMLLKSLELSD-TEVGSSGL 396
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
+HL + LE + LS T +T G+ +S+L +L ++L +TD+ L +L LT L +L
Sbjct: 397 QHLSGLRNLESINLSFTLVTDTGMKKISALNSLKSVNLDNRQITDVGLAALTSLTGLTHL 456
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAW-----TGVTKLPNISSLECLNLSFIQQVGAET 248
DL+G+++++ G + + F L L + GV + ++ +L+ LNLS Q V T
Sbjct: 457 DLFGARITDYGTSCFRFFKNLESLEVCGGLITDAGVKNIKDLKALKQLNLS--QNVNL-T 513
Query: 249 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 307
D L L + L L LN+ T+VS+A L L + L LSL + +T + +L +
Sbjct: 514 DKTLEL--ISGLTALVSLNVSNTRVSNAGLRHLKDLQNLRSLSLDSCRVTTSEVKKLQA 570
>gi|125540271|gb|EAY86666.1| hypothetical protein OsI_08050 [Oryza sativa Indica Group]
Length = 582
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 152/310 (49%), Gaps = 27/310 (8%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N ++ + + + AE M L +L++ C ++ L L G+ L+ L++ C
Sbjct: 186 NLTSLSFKSSDGITAEAMEAFANLVNLVNLDLERCLKI-HGGLVHLKGLRNLESLNMRYC 244
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+ D+ +K+L ++ L++L L+ +T G++ L L L+ L+L G PVT L ++
Sbjct: 245 NNIADSDIKYLSDLTNLKELQLACCRITDLGVSYLRGLSKLTQLNLEGCPVTAACLEAIS 304
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSF 240
L L L+L + G + +L LNL + +T L + +LE LNL
Sbjct: 305 GLASLVVLNLSRCGIYGEGCENFQGLKKLKVLNLGFNNITDDCLAHLKELINLESLNLDS 364
Query: 241 IQQVGAE----------------TDLVLSLTALQNLN---HLERLNLEQTQVSDATLFPL 281
+VG E +D + + LQ+L+ +LE +NL T V+D + +
Sbjct: 365 C-KVGDEGLLHLRGLMLLKSLELSDTEVGSSGLQHLSGLRNLESINLSFTLVTDTGMKKI 423
Query: 282 STFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 341
S L ++L N +TDV L L+SL+ LT+L + A +T+ G F+ ++L+ L++
Sbjct: 424 SALNSLKSVNLDNRQITDVGLAALTSLTGLTHLDLFGARITDYGTSCFRFFKNLESLEVC 483
Query: 342 GGWLLTEDAI 351
GG L+T+ +
Sbjct: 484 GG-LITDAGV 492
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 144/293 (49%), Gaps = 17/293 (5%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N E++ +R N++ + YL L+ L +A C R+T + L G++ L +L+L C
Sbjct: 235 NLESLNMRYCNNIADSDIKYLSDLTNLKELQLA-CCRITDLGVSYLRGLSKLTQLNLEGC 293
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
VT A ++ + +++L L LS G+ +G L+ L VL+LG +TD L L+
Sbjct: 294 -PVTAACLEAISGLASLVVLNLSRCGIYGEGCENFQGLKKLKVLNLGFNNITDDCLAHLK 352
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSF 240
L LE L+L +V + G L+ L L L+ T G+ L + +LE +NLSF
Sbjct: 353 ELINLESLNLDSCKVGDEGLLHLRGLMLLKSLELSDTEVGSSGLQHLSGLRNLESINLSF 412
Query: 241 --IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLT 298
+ G + + LN L+ +NL+ Q++D L L++ L HL L A +T
Sbjct: 413 TLVTDTG--------MKKISALNSLKSVNLDNRQITDVGLAALTSLTGLTHLDLFGARIT 464
Query: 299 DVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 351
D L +L + ++T++G+ + K ++LK L+L LT+ +
Sbjct: 465 DYGTSCFRFFKNLESLEVCGGLITDAGVKNIKDLKALKQLNLSQNVNLTDKTL 517
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 127/239 (53%), Gaps = 12/239 (5%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N++ + +A+L L SLN+ C+ V L L G+ LK L+LS +V +G+
Sbjct: 339 GFNNITDDCLAHLKELINLESLNLDSCK-VGDEGLLHLRGLMLLKSLELSD-TEVGSSGL 396
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
+HL + LE + LS T +T G+ +S+L +L ++L +TD+ L +L LT L +L
Sbjct: 397 QHLSGLRNLESINLSFTLVTDTGMKKISALNSLKSVNLDNRQITDVGLAALTSLTGLTHL 456
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAW-----TGVTKLPNISSLECLNLSFIQQVGAET 248
DL+G+++++ G + + F L L + GV + ++ +L+ LNLS Q V T
Sbjct: 457 DLFGARITDYGTSCFRFFKNLESLEVCGGLITDAGVKNIKDLKALKQLNLS--QNVNL-T 513
Query: 249 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 307
D L L + L L LN+ T++S+A L L + L LSL + +T + +L +
Sbjct: 514 DKTLEL--ISGLTALVSLNVSNTRISNAGLRHLKDLQNLRSLSLDSCRVTTSEVKKLQA 570
>gi|46447562|ref|YP_008927.1| hypothetical protein pc1928 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401203|emb|CAF24652.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 528
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 170/344 (49%), Gaps = 28/344 (8%)
Query: 30 QRRSLERLPAHLADSLLR-------HLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEW 82
Q ER+ HL+D + + HL S+L+ K N +A+ +
Sbjct: 181 QLAEFERIINHLSDEIKKLNFSENTHLTDAHF---SVLKECK-NLKALHFEACQILTDAG 236
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+A+L L+ LN++ C +T L LT +T L+ LDLS+C TD G+ HL S++ L
Sbjct: 237 LAHLKPLTALQHLNLSGCYHLTDVGLAHLTFLTGLQHLDLSQCWHFTDDGLAHLTSLTAL 296
Query: 143 EKLWLSET-GLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQ- 199
+ L L L G+A L L +L L+L G +TD L L LT L++L+L +
Sbjct: 297 QYLALMGCKNLIDAGLAHLKPLTSLQHLNLRGCGYLTDAGLAHLAPLTGLQHLNLSKCEN 356
Query: 200 VSNRGAAVLKMFPRLSFLN------LAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLS 253
+++ G A L++ L +LN L G+ L +++L+ L+LS Q TD+ L+
Sbjct: 357 LTDVGLAHLRLLVALQYLNLDNCRKLTDDGLAHLTPVTNLQHLDLS---QCWHLTDIGLA 413
Query: 254 -LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKL 311
LT L++L HL+ E ++D L L+ L HL L +LTD L L+ L+ L
Sbjct: 414 HLTPLKSLQHLDLSRCE--NLTDDGLVHLTPLTALQHLDLSYCYNLTDDGLAHLTPLTTL 471
Query: 312 TNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQF 354
+L + LT+ GL P +L+ LDL G T+D + +F
Sbjct: 472 QHLDLMGCKNLTDDGLAHLTPLIALQYLDLIGCKNFTDDGLARF 515
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 95/179 (53%), Gaps = 12/179 (6%)
Query: 73 RGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAG 132
+ EN D +A+L L+ LN+ +CR++T L LT +T L+ LDLS+C +TD G
Sbjct: 353 KCENLTDV-GLAHLRLLVALQYLNLDNCRKLTDDGLAHLTPVTNLQHLDLSQCWHLTDIG 411
Query: 133 MKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG-GLPVTDLVLRSLQVLTKL 190
+ HL + +L+ L LS LT DG+ L+ L L LDL +TD L L LT L
Sbjct: 412 LAHLTPLKSLQHLDLSRCENLTDDGLVHLTPLTALQHLDLSYCYNLTDDGLAHLTPLTTL 471
Query: 191 EYLDLWGSQ-VSNRGAAVLKMFPRLSFL------NLAWTGVTKLPNISSLECLNLSFIQ 242
++LDL G + +++ G A L L +L N G+ + N+++ LNL+ I
Sbjct: 472 QHLDLMGCKNLTDDGLAHLTPLIALQYLDLIGCKNFTDDGLARFKNLAA--SLNLTIIN 528
>gi|46446522|ref|YP_007887.1| hypothetical protein pc0888 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400163|emb|CAF23612.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 653
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 101/317 (31%), Positives = 161/317 (50%), Gaps = 37/317 (11%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N + + L + + +A+L L+ L ++DCR++T + L LT +T L+ L+LS C
Sbjct: 249 NLKVLHLEKCQVITDDGLAHLTPLTALQHLELSDCRKLTDAGLAHLTPLTALQHLNLSFC 308
Query: 126 VKVTDAGMKHLLSISTLEKLWLSET--GLTADGIALLSSLQNLSVLDLGGL-PVTDLVLR 182
K+TDAG+ HL ++ L+ L LS LT G+A L+ L L L+L +TD L
Sbjct: 309 DKLTDAGLAHLTPLTALQHLNLSRCYYKLTDAGLAHLTPLTALQHLNLSFCDKLTDAGLV 368
Query: 183 SLQVLTKLEYLDL---WGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSL 233
L++LT L++LDL W +++ G A L L L+L+ G+ L +++L
Sbjct: 369 HLKLLTGLQHLDLREFW--ELTGAGLAHLTTLTALQHLDLSGCDKLTDVGLAHLTPLTTL 426
Query: 234 ECLNLSFIQQVGAETDLVLS-LTALQNLN-------------------HLERLNLEQ-TQ 272
+ L+L + + + L LT LQ+LN L+ L+L Q ++
Sbjct: 427 QHLDLKRCRNLTNAGLVHLKLLTGLQHLNLSECYHLTDAGLAHLTPLTALQHLDLSQCSK 486
Query: 273 VSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSI-RDAVLTNSGLGSFK 330
++D L L+ L HL L S LTD L L+ L+ L +L + R LT++GL
Sbjct: 487 LTDDGLAHLTPLTALQHLDLSQCSKLTDDGLAHLTPLTALQHLVLARCRNLTDAGLAHLT 546
Query: 331 PPRSLKLLDLHGGWLLT 347
P +L+ L+L GG+ LT
Sbjct: 547 PLETLQHLNLSGGYKLT 563
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 154/309 (49%), Gaps = 18/309 (5%)
Query: 56 FPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMT 115
F +++ F + EA + + L + L+ L++ C+ +T L LT +T
Sbjct: 214 FEKIIKHFLNEIEAFNFSDNAYLTDAHLLALKDCKNLKVLHLEKCQVITDDGLAHLTPLT 273
Query: 116 CLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLG-- 172
L+ L+LS C K+TDAG+ HL ++ L+ L LS LT G+A L+ L L L+L
Sbjct: 274 ALQHLELSDCRKLTDAGLAHLTPLTALQHLNLSFCDKLTDAGLAHLTPLTALQHLNLSRC 333
Query: 173 GLPVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLN------LAWTGVT 225
+TD L L LT L++L+L + ++++ G LK+ L L+ L G+
Sbjct: 334 YYKLTDAGLAHLTPLTALQHLNLSFCDKLTDAGLVHLKLLTGLQHLDLREFWELTGAGLA 393
Query: 226 KLPNISSLECLNLSFIQQVGAETDLVLS-LTALQNLNHLERLNLEQTQVSDATLFPLSTF 284
L +++L+ L+LS ++ TD+ L+ LT L L HL+ +++A L L
Sbjct: 394 HLTTLTALQHLDLSGCDKL---TDVGLAHLTPLTTLQHLDLKRCR--NLTNAGLVHLKLL 448
Query: 285 KELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRD-AVLTNSGLGSFKPPRSLKLLDLHG 342
L HL+L LTD L L+ L+ L +L + + LT+ GL P +L+ LDL
Sbjct: 449 TGLQHLNLSECYHLTDAGLAHLTPLTALQHLDLSQCSKLTDDGLAHLTPLTALQHLDLSQ 508
Query: 343 GWLLTEDAI 351
LT+D +
Sbjct: 509 CSKLTDDGL 517
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 72/134 (53%), Gaps = 3/134 (2%)
Query: 81 EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
+ +A+L L+ L +A CR +T + L LT + L+ L+LS K+T AG+ HL +
Sbjct: 515 DGLAHLTPLTALQHLVLARCRNLTDAGLAHLTPLETLQHLNLSGGYKLTGAGLAHLRPLV 574
Query: 141 TLEKLWLSE-TGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDL-WG 197
L+ L LS GLT G+A L+ L L LDL +TD L L+ L L++LDL +
Sbjct: 575 ALQHLDLSYCNGLTDAGLAHLTPLVALQHLDLSYCDGLTDAGLTHLRPLVALQHLDLSYC 634
Query: 198 SQVSNRGAAVLKMF 211
+++ G A K
Sbjct: 635 DGLTDAGLAHFKFL 648
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 5/120 (4%)
Query: 40 HLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVAD 99
HL + R+L L + LE +H + L G + +A+L L+ L+++
Sbjct: 528 HLVLARCRNLTDAGLAHLTPLETLQH----LNLSGGYKLTGAGLAHLRPLVALQHLDLSY 583
Query: 100 CRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIA 158
C +T + L LT + L+ LDLS C +TDAG+ HL + L+ L LS GLT G+A
Sbjct: 584 CNGLTDAGLAHLTPLVALQHLDLSYCDGLTDAGLTHLRPLVALQHLDLSYCDGLTDAGLA 643
>gi|46447300|ref|YP_008665.1| hypothetical protein pc1666 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400941|emb|CAF24390.1| hypothetical protein pc1666 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 518
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 160/301 (53%), Gaps = 17/301 (5%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N + + L+ +++ +++L L+ LN++ C ++T + L LT + L+ LDLS+C
Sbjct: 210 NLKVLYLQECHNLTDAGLSHLAPLVTLQHLNLSYCSKLTDAGLAHLTSLVTLQHLDLSKC 269
Query: 126 VKVTDAGMKHLLSISTLEKLWLSE-TGLTADGIALLSSLQNLSVLDLG-GLPVTDLVLRS 183
+TDAG+ HL ++ L+ L LS + LT G+A L+SL L LDL + +TD+ L
Sbjct: 270 YNLTDAGLTHLTPLAALQHLNLSYCSKLTDAGLAHLTSLVTLQHLDLTWCVNLTDVGLAH 329
Query: 184 LQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECL 236
L L L++L+L + ++++ G A L L L+L W G+ L + +L+ L
Sbjct: 330 LTPLAALQHLNLSYCIKLTDVGLAHLTSLVALQHLDLTWCVNLTEVGLAHLTPLVTLQHL 389
Query: 237 NLSFIQQV-GAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 295
LS + A + SL ALQ+LN L++ + +++D L L+ L HL L
Sbjct: 390 ELSKCHNLTDAGLAHLTSLVALQHLN----LSICK-KITDVGLAHLTPLVALQHLDLSGC 444
Query: 296 -SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQ 353
LTDV L L++L L +L + V LT++GL KP +L+ L+L LT+ +
Sbjct: 445 DKLTDVGLAHLTTLVALQHLDLTCCVNLTDAGLVHLKPLMALQHLNLSYCTNLTDAGLAH 504
Query: 354 F 354
F
Sbjct: 505 F 505
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ ++L G + + +A+L L+ L++ C +T + L L + L+ L+LS C
Sbjct: 437 QHLDLSGCDKLTDVGLAHLTTLVALQHLDLTCCVNLTDAGLVHLKPLMALQHLNLSYCTN 496
Query: 128 VTDAGMKHLLSISTLEKLWLS 148
+TDAG+ H +++T L LS
Sbjct: 497 LTDAGLAHFKNLTTSLNLKLS 517
>gi|46447549|ref|YP_008914.1| hypothetical protein pc1915 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401190|emb|CAF24639.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 683
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/287 (33%), Positives = 149/287 (51%), Gaps = 22/287 (7%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N DA +A+L L+ L+++ CR +T + L LT +T L+ LDL C +TDAG+ H
Sbjct: 286 NLTDA-GLAHLAPLTALQYLDLSHCRNLTDTGLAHLTPLTALQHLDLRVCKNITDAGLAH 344
Query: 136 LLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLG-GLPVTDLVLRSLQVLTKLEYL 193
L ++ L+ L LS+ G LT G+A L+ L L L+L +TD L L+ LT L+ L
Sbjct: 345 LAPLTALQNLDLSDCGHLTDAGLAYLTPLTALQHLNLYFCFNLTDAGLVHLRPLTALQTL 404
Query: 194 DL---WGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSFIQQV 244
L W +++ G A L L LNL+ G+ L +++L+ LNLS+ + +
Sbjct: 405 GLSQCWN--LTDTGLAHLTPLTALQHLNLSRCYKLTDAGLAHLTPLTALQHLNLSYCENL 462
Query: 245 GAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHLSL-RNASLTDVSL 302
+ L L L L+ L L Q +++DA L L+ L HL+L R LTD L
Sbjct: 463 TDD-----GLAHLAPLTALQYLRLSQCWKLTDAGLAHLTPLTALQHLNLSRCYKLTDAGL 517
Query: 303 HQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTE 348
+L+ L+ L +L ++ + LT++GL P L+ L L LT+
Sbjct: 518 ARLTPLTALQHLDLKYCINLTDAGLARLTPLSGLQHLALTNCKYLTD 564
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 156/313 (49%), Gaps = 48/313 (15%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ ++LR ++ +A+L L++L+++DC +T + L LT +T L+ L+L C
Sbjct: 327 QHLDLRVCKNITDAGLAHLAPLTALQNLDLSDCGHLTDAGLAYLTPLTALQHLNLYFCFN 386
Query: 128 VTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG-GLPVTDLVLRSLQ 185
+TDAG+ HL ++ L+ L LS+ LT G+A L+ L L L+L +TD L L
Sbjct: 387 LTDAGLVHLRPLTALQTLGLSQCWNLTDTGLAHLTPLTALQHLNLSRCYKLTDAGLAHLT 446
Query: 186 VLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLA--W----TGVTKLPNISSLECLNL 238
LT L++L+L + +++ G A L L +L L+ W G+ L +++L+ LNL
Sbjct: 447 PLTALQHLNLSYCENLTDDGLAHLAPLTALQYLRLSQCWKLTDAGLAHLTPLTALQHLNL 506
Query: 239 SFIQQVGAETDLVLS----LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 294
S ++ TD L+ LTALQ+L+ +NL +DA L L+ L HL+L N
Sbjct: 507 SRCYKL---TDAGLARLTPLTALQHLDLKYCINL-----TDAGLARLTPLSGLQHLALTN 558
Query: 295 A--------------------------SLTDVSLHQLSSLSKLTNLSIRDA-VLTNSGLG 327
+LTDV L L+ L+ L +L + + LT++GL
Sbjct: 559 CKYLTDAGLAHLTLLTALQYLALANCKNLTDVGLAHLTPLTALQHLDLSECRHLTDAGLA 618
Query: 328 SFKPPRSLKLLDL 340
P L+ L+L
Sbjct: 619 HLTPLTGLQHLNL 631
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 151/311 (48%), Gaps = 23/311 (7%)
Query: 56 FPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMT 115
F +L F + E + + + L + L+ L + CR +T + L LT +T
Sbjct: 215 FEKILNHFSNEIERVNFSENAHLTDAHLLVLKNCKNLKVLYLQGCRNLTDAGLAHLTPLT 274
Query: 116 CLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGL 174
L+ L+LS C +TDAG+ HL ++ L+ L LS LT G+A L+ L L LDL
Sbjct: 275 GLQHLNLSWCRNLTDAGLAHLAPLTALQYLDLSHCRNLTDTGLAHLTPLTALQHLDLRVC 334
Query: 175 P-VTDLVLRSLQVLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAW------TGVTK 226
+TD L L LT L+ LDL +++ G A L L LNL + G+
Sbjct: 335 KNITDAGLAHLAPLTALQNLDLSDCGHLTDAGLAYLTPLTALQHLNLYFCFNLTDAGLVH 394
Query: 227 LPNISSLECLNLSFIQQVGAETDLVLS----LTALQNLNHLERLNLEQTQVSDATLFPLS 282
L +++L+ L LS Q TD L+ LTALQ+LN L R +++DA L L+
Sbjct: 395 LRPLTALQTLGLS---QCWNLTDTGLAHLTPLTALQHLN-LSRC----YKLTDAGLAHLT 446
Query: 283 TFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDA-VLTNSGLGSFKPPRSLKLLDL 340
L HL+L +LTD L L+ L+ L L + LT++GL P +L+ L+L
Sbjct: 447 PLTALQHLNLSYCENLTDDGLAHLAPLTALQYLRLSQCWKLTDAGLAHLTPLTALQHLNL 506
Query: 341 HGGWLLTEDAI 351
+ LT+ +
Sbjct: 507 SRCYKLTDAGL 517
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+A+L L+ L++++CR +T + L LT +T L+ L+LS C +TDAG+ HL +S L
Sbjct: 592 LAHLTPLTALQHLDLSECRHLTDAGLAHLTPLTGLQHLNLSWCRNLTDAGLAHLSPLSVL 651
Query: 143 EKLWLSETG-LTADGI 157
+ L LS+ LT DG+
Sbjct: 652 QHLALSQCSRLTDDGL 667
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 69/128 (53%), Gaps = 5/128 (3%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N DA +A L L+ L + +C+ +T + L LT +T L+ L L+ C +TD G+ H
Sbjct: 536 NLTDA-GLARLTPLSGLQHLALTNCKYLTDAGLAHLTLLTALQYLALANCKNLTDVGLAH 594
Query: 136 LLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYL 193
L ++ L+ L LSE LT G+A L+ L L L+L +TD L L L+ L++L
Sbjct: 595 LTPLTALQHLDLSECRHLTDAGLAHLTPLTGLQHLNLSWCRNLTDAGLAHLSPLSVLQHL 654
Query: 194 DLWGSQVS 201
L SQ S
Sbjct: 655 AL--SQCS 660
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 37/59 (62%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIST 141
+A+L L+ LN++ CR +T + L L+ ++ L+ L LS+C ++TD G+ +++T
Sbjct: 617 LAHLTPLTGLQHLNLSWCRNLTDAGLAHLSPLSVLQHLALSQCSRLTDDGLDRFKTLAT 675
>gi|168701031|ref|ZP_02733308.1| leucine-rich repeat domain protein [Gemmata obscuriglobus UQM 2246]
Length = 389
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 126/250 (50%), Gaps = 12/250 (4%)
Query: 97 VADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADG 156
V D +V+ S L L +T L+ L L + VTDAG++ L+ + L +L L ET +T G
Sbjct: 120 VLDYTKVSGSGLKHLAALTKLRTLSLGSKI-VTDAGLRGLVGVRGLRQLDLRETSVTDAG 178
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF 216
+ ++ L L L L PVT L+ L +LTKL++L L G++++ G + L L
Sbjct: 179 LKEIAPLSELKTLMLVNAPVTGPGLKDLALLTKLQFLFLSGTRITGDGLSELTGLKSLRL 238
Query: 217 LNLAWT-----GVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 271
L L T G+ +L +L L LS + GA L L L L L+L T
Sbjct: 239 LELGGTPLTDAGLKQLAGFDTLGHLGLSNTKVTGA------GLKELAALKQLSGLDLGST 292
Query: 272 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP 331
+++DA L ++ L L++R+ +TD + L+ L+KL L++ +TN+ +
Sbjct: 293 KITDADLKEIAALTNLTGLTMRDTPVTDAGVRNLAPLTKLRRLNLTHTKVTNACAKTLAT 352
Query: 332 PRSLKLLDLH 341
+ L +DLH
Sbjct: 353 FKHLTSVDLH 362
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 124/256 (48%), Gaps = 31/256 (12%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
V + +L A LR+L++ + VT + L L G+ L++LDL R VTDAG+K +
Sbjct: 126 VSGSGLKHLAALTKLRTLSLG-SKIVTDAGLRGLVGVRGLRQLDL-RETSVTDAGLKEIA 183
Query: 138 SISTLEKL------------------------WLSETGLTADGIALLSSLQNLSVLDLGG 173
+S L+ L +LS T +T DG++ L+ L++L +L+LGG
Sbjct: 184 PLSELKTLMLVNAPVTGPGLKDLALLTKLQFLFLSGTRITGDGLSELTGLKSLRLLELGG 243
Query: 174 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT--KLPNIS 231
P+TD L+ L L +L L ++V+ G L +LS L+L T +T L I+
Sbjct: 244 TPLTDAGLKQLAGFDTLGHLGLSNTKVTGAGLKELAALKQLSGLDLGSTKITDADLKEIA 303
Query: 232 SLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 291
+L L + TD + L L L RLNL T+V++A L+TFK L +
Sbjct: 304 ALTNLT-GLTMRDTPVTD--AGVRNLAPLTKLRRLNLTHTKVTNACAKTLATFKHLTSVD 360
Query: 292 LRNASLTDVSLHQLSS 307
L +T+ +L +
Sbjct: 361 LHQTDVTEEGGKELKA 376
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 106/236 (44%), Gaps = 26/236 (11%)
Query: 120 LDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDL 179
+DLS TDAG+K L + L L L+ T +T + ++ L+VL++ +TD
Sbjct: 46 VDLSGAKTFTDAGLKELSLFAGLTNLNLTNTQVTDAALKDVARFPKLTVLNVSYTQITDE 105
Query: 180 VLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLS 239
LR + LT+L L L ++VS G L +L L+L VT
Sbjct: 106 GLREIAGLTELTDLVLDYTKVSGSGLKHLAALTKLRTLSLGSKIVTD------------- 152
Query: 240 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 299
L L + L +L+L +T V+DA L ++ EL L L NA +T
Sbjct: 153 ------------AGLRGLVGVRGLRQLDLRETSVTDAGLKEIAPLSELKTLMLVNAPVTG 200
Query: 300 VSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFC 355
L L+ L+KL L + +T GL +SL+LL+L GG LT+ + Q
Sbjct: 201 PGLKDLALLTKLQFLFLSGTRITGDGLSELTGLKSLRLLEL-GGTPLTDAGLKQLA 255
>gi|46447588|ref|YP_008953.1| hypothetical protein pc1954 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401229|emb|CAF24678.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 704
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/275 (33%), Positives = 143/275 (52%), Gaps = 17/275 (6%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ + LR ++ + +A+L L+ L+++ C ++T + L LT +T L+ LDLS C
Sbjct: 422 QHLNLRNCRNLTDDGLAHLAPLTALQHLDLSYCWQLTDAGLAHLTPLTGLQRLDLSYCEN 481
Query: 128 VTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQ 185
+TD G+ HL+ + L+ L L LT DG+ L+ L L LDL +TD L L
Sbjct: 482 LTDVGLAHLIPLKALQHLNLRNCRNLTDDGLVHLAPLTALQHLDLSDCNNLTDAGLAHLT 541
Query: 186 VLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNL 238
LT L++LDL + ++ G A L L +L+L+W G+ L +++L+ L L
Sbjct: 542 PLTALQHLDLKYCINLTGAGLAHLAFLTGLQYLDLSWCKNLIDAGLVHLKLLTALQYLGL 601
Query: 239 SFIQQVGAETDLVL-SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-S 296
S+ + + + L SLTALQ+L + NL +DA L L + L HL LR +
Sbjct: 602 SYCENLTDDGLAHLRSLTALQHLALIHYKNL-----TDAGLVHLRSLTSLQHLDLRYCQN 656
Query: 297 LTDVSLHQLSSLSKLTNLSI-RDAVLTNSGLGSFK 330
LT L L +L+ L L++ + LT+ GL FK
Sbjct: 657 LTGDGLAHLRTLTALQYLALTQYKNLTDDGLARFK 691
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 152/304 (50%), Gaps = 17/304 (5%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N + + L ++ + +A+L L+ L++ C +T L LT +T L+ L+LS C
Sbjct: 220 NLKVLHLNACQAITDDGLAHLTPLTGLQHLDIRVCEYLTDDGLAYLTSLTGLQHLNLSGC 279
Query: 126 VKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRS 183
+TD G+ HL ++ L+ L L LTA G+A L L+ L LDL +T++ L
Sbjct: 280 YHLTDTGLAHLTPLTGLQHLDLRICEYLTATGLAHLKPLKALQHLDLSYCKNLTNVGLSH 339
Query: 184 LQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECL 236
L LT L++LDL + Q+++ G L L L+L+ G+ L +++L+CL
Sbjct: 340 LAPLTALQHLDLSYCWQLADAGLVYLTPLTGLQHLDLSGYHKLTDAGLAHLTPLTALQCL 399
Query: 237 NLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTFKELIHLSLRNA 295
+LS+ + + TD + L L L L+ LNL + ++D L L+ L HL L
Sbjct: 400 DLSYCENL---TD--VGLAHLMPLKALQHLNLRNCRNLTDDGLAHLAPLTALQHLDLSYC 454
Query: 296 -SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQ 353
LTD L L+ L+ L L + LT+ GL P ++L+ L+L LT+D ++
Sbjct: 455 WQLTDAGLAHLTPLTGLQRLDLSYCENLTDVGLAHLIPLKALQHLNLRNCRNLTDDGLVH 514
Query: 354 FCKM 357
+
Sbjct: 515 LAPL 518
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 108/227 (47%), Gaps = 37/227 (16%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ + LR ++ + + +L L+ L+++DC +T + L LT +T L+ LDL C+
Sbjct: 497 QHLNLRNCRNLTDDGLVHLAPLTALQHLDLSDCNNLTDAGLAHLTPLTALQHLDLKYCIN 556
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
+T AG+ HL ++ L+ L LS +++D G L L++L
Sbjct: 557 LTGAGLAHLAFLTGLQYLDLSWCK---------------NLIDAG--------LVHLKLL 593
Query: 188 TKLEYLDL-WGSQVSNRGAAVLKMFPRLSFL------NLAWTGVTKLPNISSLECLNLSF 240
T L+YL L + +++ G A L+ L L NL G+ L +++SL+ L+L +
Sbjct: 594 TALQYLGLSYCENLTDDGLAHLRSLTALQHLALIHYKNLTDAGLVHLRSLTSLQHLDLRY 653
Query: 241 IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 287
Q + + L L+ L L+ L L TQ + T L+ FK L
Sbjct: 654 CQNLTGD-----GLAHLRTLTALQYLAL--TQYKNLTDDGLARFKTL 693
>gi|168057635|ref|XP_001780819.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667754|gb|EDQ54376.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 564
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 146/283 (51%), Gaps = 13/283 (4%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N + LR N + A M L++L++ C + ++ L G+T L++L++ C
Sbjct: 167 NLTTLSLRSSNLITAAGMRNFTNLVSLKNLDLERCPLIHGGFVY-LRGLTTLEKLNVGWC 225
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+ V +A + HL I L++L +S + + G+A L + NL L + G P+T ++++
Sbjct: 226 IGVRNADITHLAGIVNLKELQISRSKVNDSGVASLKGMTNLRSLSMEGCPITAQSMKTIA 285
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW-----TGVTKLPNISSLECLNLSF 240
LT L +L++ + + G L+ L LNL + +G+ L +++LE LNL
Sbjct: 286 GLTTLCHLNINSCYLPDSGCQKLEGLINLRTLNLGYNELTDSGMVFLKGLTNLERLNLDS 345
Query: 241 IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR-NASLTD 299
+VG E + ++ L +L L+L ++V + L LS K+L L+L +TD
Sbjct: 346 C-KVGDE-----GIKHVKGLLNLRMLDLSDSEVGNVGLRFLSGLKKLEILNLSFTGGVTD 399
Query: 300 VSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 342
+ L +++++ LT+L++ +T++GL + LK LDL G
Sbjct: 400 IGLSTIATITSLTSLNLDSKQITDTGLAALTGLTGLKNLDLFG 442
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 135/296 (45%), Gaps = 39/296 (13%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
V+ +A L LRSL++ C +T+ ++ + G+T L L+++ C + D+G + L
Sbjct: 252 VNDSGVASLKGMTNLRSLSMEGCP-ITAQSMKTIAGLTTLCHLNINSCY-LPDSGCQKLE 309
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
+ L L L LT G+ L L NL L+L V D ++ ++ L L LDL
Sbjct: 310 GLINLRTLNLGYNELTDSGMVFLKGLTNLERLNLDSCKVGDEGIKHVKGLLNLRMLDLSD 369
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWTG------VTKLPNISSLECLNLSFIQQVGAETDLV 251
S+V N G L +L LNL++TG ++ + I+SL LNL Q TD
Sbjct: 370 SEVGNVGLRFLSGLKKLEILNLSFTGGVTDIGLSTIATITSLTSLNLDSKQI----TDT- 424
Query: 252 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV----------- 300
L AL L L+ L+L +++D + L FK L L L +TDV
Sbjct: 425 -GLAALTGLTGLKNLDLFGAKITDYGMARLRHFKNLQSLELCGGGITDVGVSSIKDLTLL 483
Query: 301 --------------SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 342
SL LS + L +L++ ++ +TN+GL +P L L L G
Sbjct: 484 TSLNLSHNLRLTDRSLQYLSGMENLVSLNVANSKVTNAGLQHLRPLTKLTSLALQG 539
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 126/279 (45%), Gaps = 41/279 (14%)
Query: 87 GAFRYLRSL------NVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAG-------- 132
G F YLR L NV C V ++ + L G+ LKEL +SR KV D+G
Sbjct: 206 GGFVYLRGLTTLEKLNVGWCIGVRNADITHLAGIVNLKELQISRS-KVNDSGVASLKGMT 264
Query: 133 ----------------MKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 176
MK + ++TL L ++ L G L L NL L+LG +
Sbjct: 265 NLRSLSMEGCPITAQSMKTIAGLTTLCHLNINSCYLPDSGCQKLEGLINLRTLNLGYNEL 324
Query: 177 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNIS 231
TD + L+ LT LE L+L +V + G +K L L+L+ + G+ L +
Sbjct: 325 TDSGMVFLKGLTNLERLNLDSCKVGDEGIKHVKGLLNLRMLDLSDSEVGNVGLRFLSGLK 384
Query: 232 SLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 291
LE LNLSF G TD+ LS A + L LNL+ Q++D L L+ L +L
Sbjct: 385 KLEILNLSF---TGGVTDIGLSTIA--TITSLTSLNLDSKQITDTGLAALTGLTGLKNLD 439
Query: 292 LRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 330
L A +TD + +L L +L + +T+ G+ S K
Sbjct: 440 LFGAKITDYGMARLRHFKNLQSLELCGGGITDVGVSSIK 478
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 114/239 (47%), Gaps = 26/239 (10%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
V E + ++ LR L+++D V + L L+G+ L+ L+LS VTD G+ +
Sbjct: 348 VGDEGIKHVKGLLNLRMLDLSD-SEVGNVGLRFLSGLKKLEILNLSFTGGVTDIGLSTIA 406
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
+I++L L L +T G+A L+ L L LDL G +TD + L+ L+ L+L G
Sbjct: 407 TITSLTSLNLDSKQITDTGLAALTGLTGLKNLDLFGAKITDYGMARLRHFKNLQSLELCG 466
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTAL 257
+++ G + +K L+ LNL+ NL + SL L
Sbjct: 467 GGITDVGVSSIKDLTLLTSLNLSH---------------NLRLTDR---------SLQYL 502
Query: 258 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 316
+ +L LN+ ++V++A L L +L L+L+ +T ++ L + S L NLS+
Sbjct: 503 SGMENLVSLNVANSKVTNAGLQHLRPLTKLTSLALQGCKVTRTAVDHLKATS-LPNLSV 560
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 106/247 (42%), Gaps = 37/247 (14%)
Query: 142 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG-SQV 200
+E WL G S ++L LD+ G PVTD L LQ T L+ L L +
Sbjct: 104 VEDFWLDIIG---------SQGESLLALDISGSPVTDDGLACLQSCTNLQTLSLNSCDHI 154
Query: 201 SNRGAAVLKMFPRLSFLNL------AWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSL 254
S+ G +VL L+ L+L G+ N+ SL+ L+L + + L
Sbjct: 155 SDEGLSVLSGLSNLTTLSLRSSNLITAAGMRNFTNLVSLKNLDLERCPLIHGGFVYLRGL 214
Query: 255 TALQNLN-------------------HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 295
T L+ LN +L+ L + +++V+D+ + L L LS+
Sbjct: 215 TTLEKLNVGWCIGVRNADITHLAGIVNLKELQISRSKVNDSGVASLKGMTNLRSLSMEGC 274
Query: 296 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFC 355
+T S+ ++ L+ L +L+I L +SG + +L+ L+L G+ D+ + F
Sbjct: 275 PITAQSMKTIAGLTTLCHLNINSCYLPDSGCQKLEGLINLRTLNL--GYNELTDSGMVFL 332
Query: 356 KMHPRIE 362
K +E
Sbjct: 333 KGLTNLE 339
>gi|356550632|ref|XP_003543689.1| PREDICTED: F-box/LRR-repeat protein 14-like [Glycine max]
Length = 565
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 146/309 (47%), Gaps = 25/309 (8%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N ++ R ++ A+ + L L++ C + S L + G+T L+ L+L+ C
Sbjct: 169 NLASLSFRRNYAISAQGLNTFSGLINLVKLDLERCPGIHGS-LVHIQGLTMLESLNLNWC 227
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+ D MK L ++ L+ L +S +T GI+ L LQ L++L+L G VT L SL+
Sbjct: 228 NCLVDVDMKPLSVLTNLKSLEISFNKVTDFGISFLKGLQKLNLLNLEGCQVTTACLDSLE 287
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNL-- 238
L L L+L +SN G L LNL + +T L ++ L+ LNL
Sbjct: 288 ELPALSNLNLSRCNLSNDGCEKFSRLENLKVLNLGFNDITDACLAHLKGLTKLKSLNLDS 347
Query: 239 ------SFIQQVGAETDLVLSLT----------ALQNLNHLERLNLEQTQVSDATLFPLS 282
+ G + L L+ L L++LE++NL T V+D+ L L
Sbjct: 348 CRIEDEGLVHLAGHQQLNCLELSDTGIGSNGLHHLSGLSNLEKINLSFTFVNDSGLSKLC 407
Query: 283 TFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 342
L L+L +TD L L+SL+ LT L + A +T+ G K ++L+LL++ G
Sbjct: 408 GLSSLKSLNLDARQVTDTGLASLTSLTGLTELDLFGARITDFGTNYLKCFKNLRLLEICG 467
Query: 343 GWLLTEDAI 351
G LT+D +
Sbjct: 468 GE-LTDDGV 475
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 127/260 (48%), Gaps = 18/260 (6%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
VD + M L L+SL ++ +VT + L G+ L L+L C +VT A + L
Sbjct: 231 VDVD-MKPLSVLTNLKSLEIS-FNKVTDFGISFLKGLQKLNLLNLEGC-QVTTACLDSLE 287
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
+ L L LS L+ DG S L+NL VL+LG +TD L L+ LTKL+ L+L
Sbjct: 288 ELPALSNLNLSRCNLSNDGCEKFSRLENLKVLNLGFNDITDACLAHLKGLTKLKSLNLDS 347
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSF--IQQVGAETDL 250
++ + G L +L+ L L+ TG+ L +S+LE +NLSF + G
Sbjct: 348 CRIEDEGLVHLAGHQQLNCLELSDTGIGSNGLHHLSGLSNLEKINLSFTFVNDSG----- 402
Query: 251 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 310
L+ L L+ L+ LNL+ QV+D L L++ L L L A +TD + L
Sbjct: 403 ---LSKLCGLSSLKSLNLDARQVTDTGLASLTSLTGLTELDLFGARITDFGTNYLKCFKN 459
Query: 311 LTNLSIRDAVLTNSGLGSFK 330
L L I LT+ G+ + K
Sbjct: 460 LRLLEICGGELTDDGVKNIK 479
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 114/236 (48%), Gaps = 6/236 (2%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N + +A+L L+SLN+ CR + L L G L L+LS + G+
Sbjct: 322 GFNDITDACLAHLKGLTKLKSLNLDSCR-IEDEGLVHLAGHQQLNCLELSD-TGIGSNGL 379
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
HL +S LEK+ LS T + G++ L L +L L+L VTD L SL LT L L
Sbjct: 380 HHLSGLSNLEKINLSFTFVNDSGLSKLCGLSSLKSLNLDARQVTDTGLASLTSLTGLTEL 439
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK--LPNISSLECLNLSFIQQVGAETDLV 251
DL+G+++++ G LK F L L + +T + NI L L + Q TD
Sbjct: 440 DLFGARITDFGTNYLKCFKNLRLLEICGGELTDDGVKNIKELSSLKSLNLSQNCNLTDTT 499
Query: 252 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 307
L L + L L LN+ + +++A L L T K L LSL + +T + +L S
Sbjct: 500 LEL--ISGLTDLISLNVSNSGITNAGLQHLKTLKNLRSLSLESCKVTANGIKKLQS 553
>gi|357468127|ref|XP_003604348.1| F-box/LRR-repeat protein [Medicago truncatula]
gi|355505403|gb|AES86545.1| F-box/LRR-repeat protein [Medicago truncatula]
Length = 573
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 150/325 (46%), Gaps = 27/325 (8%)
Query: 47 RHLIRRRLIFPSLLEVFK---HNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRV 103
R LI L + ++ N ++ R +S+ A+ M+ L L++ C +
Sbjct: 155 RSLISLNLNYCDKFQIMDWSLSNLTSLSFRRNDSISAQGMSAFSRLVNLVKLDLERCPGI 214
Query: 104 TSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSL 163
+ L G+T L+ L++ C +TD+ +K L +++L L +S + +T GI+ L L
Sbjct: 215 HGGTVH-LQGLTKLESLNMKWCNCITDSDIKPLSELASLTSLEISCSKVTDFGISFLRGL 273
Query: 164 QNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTG 223
Q L++L+L G VT L SL L L L+L +S+RG +L LNL +
Sbjct: 274 QKLALLNLEGCLVTSACLDSLSELPALSNLNLNRCNISDRGCERFSRLEKLKVLNLGFND 333
Query: 224 V-----TKLPNISSLECLNLS-------FIQQVGAETDLVL-----------SLTALQNL 260
+ + ++ LE LNL ++ + L+ L L L
Sbjct: 334 IGDRCLAHMKGLTKLESLNLDSCKIGDEGLENLAGHKQLICLELSDTEVGNHGLEHLSGL 393
Query: 261 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV 320
+ LE++NL T VSD+ L L L L+L +TD L L+SL+ LT+L + A
Sbjct: 394 SSLEKINLSFTVVSDSGLRKLCGLSSLKSLNLDAYQITDAGLATLTSLTGLTDLDLFGAR 453
Query: 321 LTNSGLGSFKPPRSLKLLDLHGGWL 345
+T+ G K ++L+ L++ G L
Sbjct: 454 ITDVGTNYLKKFKNLRSLEICSGGL 478
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 120/231 (51%), Gaps = 14/231 (6%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N + +A++ L SLN+ C+ + L L G L L+LS +V + G+
Sbjct: 330 GFNDIGDRCLAHMKGLTKLESLNLDSCK-IGDEGLENLAGHKQLICLELSD-TEVGNHGL 387
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
+HL +S+LEK+ LS T ++ G+ L L +L L+L +TD L +L LT L L
Sbjct: 388 EHLSGLSSLEKINLSFTVVSDSGLRKLCGLSSLKSLNLDAYQITDAGLATLTSLTGLTDL 447
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFL-----NLAWTGVTKLPNISSLECLNLSFIQQVGAET 248
DL+G+++++ G LK F L L L GV + +SSL CLNLS + +T
Sbjct: 448 DLFGARITDVGTNYLKKFKNLRSLEICSGGLTDAGVKNIKELSSLMCLNLSQNSNLTDKT 507
Query: 249 -DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLT 298
+L+ LTAL + LNL T+++ A L L T K L L+L + +T
Sbjct: 508 VELIAGLTALVS------LNLSNTRITSAGLQHLKTLKNLRSLTLESCKVT 552
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 141/289 (48%), Gaps = 13/289 (4%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
E++ ++ N + + L L SL ++ C +VT + L G+ L L+L C+
Sbjct: 228 ESLNMKWCNCITDSDIKPLSELASLTSLEIS-CSKVTDFGISFLRGLQKLALLNLEGCL- 285
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
VT A + L + L L L+ ++ G S L+ L VL+LG + D L ++ L
Sbjct: 286 VTSACLDSLSELPALSNLNLNRCNISDRGCERFSRLEKLKVLNLGFNDIGDRCLAHMKGL 345
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSFIQ 242
TKLE L+L ++ + G L +L L L+ T G+ L +SSLE +NLSF
Sbjct: 346 TKLESLNLDSCKIGDEGLENLAGHKQLICLELSDTEVGNHGLEHLSGLSSLEKINLSFT- 404
Query: 243 QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 302
V +++ L L L+ L+ LNL+ Q++DA L L++ L L L A +TDV
Sbjct: 405 -VVSDS----GLRKLCGLSSLKSLNLDAYQITDAGLATLTSLTGLTDLDLFGARITDVGT 459
Query: 303 HQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 351
+ L L +L I LT++G+ + K SL L+L LT+ +
Sbjct: 460 NYLKKFKNLRSLEICSGGLTDAGVKNIKELSSLMCLNLSQNSNLTDKTV 508
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 150/303 (49%), Gaps = 33/303 (10%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+++L + L LN+ C VTS+ L +L+ + L L+L+RC ++D G + S L
Sbjct: 267 ISFLRGLQKLALLNLEGCL-VTSACLDSLSELPALSNLNLNRC-NISDRGCERF---SRL 321
Query: 143 EKLWLSETGLTADG---IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQ 199
EKL + G G +A + L L L+L + D L +L +L L+L ++
Sbjct: 322 EKLKVLNLGFNDIGDRCLAHMKGLTKLESLNLDSCKIGDEGLENLAGHKQLICLELSDTE 381
Query: 200 VSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSFIQQVGAETDLVLSL 254
V N G L L +NL++T G+ KL +SSL+ LNL Q A + SL
Sbjct: 382 VGNHGLEHLSGLSSLEKINLSFTVVSDSGLRKLCGLSSLKSLNLDAYQITDAGLATLTSL 441
Query: 255 TALQNL------------NHLERL-NLEQTQV-----SDATLFPLSTFKELIHLSL-RNA 295
T L +L N+L++ NL ++ +DA + + L+ L+L +N+
Sbjct: 442 TGLTDLDLFGARITDVGTNYLKKFKNLRSLEICSGGLTDAGVKNIKELSSLMCLNLSQNS 501
Query: 296 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFC 355
+LTD ++ ++ L+ L +L++ + +T++GL K ++L+ L L +T + I +F
Sbjct: 502 NLTDKTVELIAGLTALVSLNLSNTRITSAGLQHLKTLKNLRSLTLE-SCKVTANDIKKFK 560
Query: 356 KMH 358
+H
Sbjct: 561 LIH 563
>gi|46447554|ref|YP_008919.1| hypothetical protein pc1920 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401195|emb|CAF24644.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 517
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 144/288 (50%), Gaps = 33/288 (11%)
Query: 60 LEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKE 119
L+V K N + + L ++ + +A+L L+ L+++ CR++T L LT +T L+
Sbjct: 246 LKVCK-NLKVLHLEACQAITDDGLAHLTPLTALQHLDLSQCRKLTGIGLAHLTPLTALQH 304
Query: 120 LDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGLPVTD 178
LDLS C +TDAG+ HL ++ L+ L LS+ LT G+ LS L L LDL +
Sbjct: 305 LDLSGCDNLTDAGLAHLAPLTALQHLNLSDCENLTDAGLVHLSPLIALQHLDLSYCWRLN 364
Query: 179 LV-LRSLQVLTKLEYLDLWGS-QVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ LT L+YLDL +++ G A LK RL +LNL + C
Sbjct: 365 YAGLAHLKPLTALQYLDLSHCINLTDAGLAHLKPLMRLQYLNLRY-------------CE 411
Query: 237 NLSFIQQVGAETDLVLS-LTALQNLNHLERLNL-EQTQVSDATLFPLSTFKELIHLSLRN 294
NL TD L+ LT L L H LNL E ++DA L L+ L HL L +
Sbjct: 412 NL---------TDAGLAHLTPLMALQH---LNLSECYHLTDAGLTHLTPLTALQHLDLSH 459
Query: 295 A-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDL 340
SLTD L L+SL+ L L + LT++GL P L+ LDL
Sbjct: 460 CRSLTDAGLAHLTSLTVLQYLDLSYCKNLTDAGLARLTPLTGLQHLDL 507
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+ +L L+ L+++ CR +T + L LT +T L+ LDLS C +TDAG+ L ++ L
Sbjct: 443 LTHLTPLTALQHLDLSHCRSLTDAGLAHLTSLTVLQYLDLSYCKNLTDAGLARLTPLTGL 502
Query: 143 EKLWLS 148
+ L LS
Sbjct: 503 QHLDLS 508
>gi|182407840|gb|ACB87911.1| F-box-containing protein 1 [Malus x domestica]
Length = 580
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 129/285 (45%), Gaps = 36/285 (12%)
Query: 96 NVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTA- 154
NV CR +T S L ++G+ L EL LS C +TD+G+ +L + L L L +TA
Sbjct: 238 NVRCCRCITDSDLKTISGLIDLNELQLSNC-NITDSGISYLKGLHKLRMLNLEGCNVTAS 296
Query: 155 -----------------------DGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLE 191
+G S L NL VL LG +TD L L+ LT LE
Sbjct: 297 CLQSISALVALAYLNLNRCSLSDEGCDKFSGLTNLKVLSLGFNEITDACLMYLKGLTSLE 356
Query: 192 YLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSFIQQVGA 246
L+L ++ + G A L L L L+ T G+ L + +LE LNLSF +
Sbjct: 357 SLNLDSCKIGDEGLANLAGLTHLKNLELSDTEVGSNGLRHLSGLKNLESLNLSFTLVTDS 416
Query: 247 ETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLS 306
SL L L L+ LNL+ Q++DA L +++ L HL L A ++D + L
Sbjct: 417 ------SLKRLSGLTSLKSLNLDARQITDAGLAAITSLTGLTHLDLFGARISDSGANHLK 470
Query: 307 SLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 351
L +L I LT++G+ + K L L++ LT ++
Sbjct: 471 YFKNLQSLEICGGGLTDAGVKNIKDLVCLTWLNISQNCNLTNKSL 515
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 138/306 (45%), Gaps = 35/306 (11%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N +A+ + V + + ++ L SL+ +++ + A +G+ L++LDL RC
Sbjct: 159 NLQALAYNYCDHVSEQGLKHISGLSNLTSLSFKRSDAISAEGMRAFSGLLNLEKLDLERC 218
Query: 126 VKV------------------------TDAGMKHLLSISTLEKLWLSETGLTADGIALLS 161
+ TD+ +K + + L +L LS +T GI+ L
Sbjct: 219 SAIHGGFVHLKGLKKLKSLNVRCCRCITDSDLKTISGLIDLNELQLSNCNITDSGISYLK 278
Query: 162 SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW 221
L L +L+L G VT L+S+ L L YL+L +S+ G L L+L +
Sbjct: 279 GLHKLRMLNLEGCNVTASCLQSISALVALAYLNLNRCSLSDEGCDKFSGLTNLKVLSLGF 338
Query: 222 TGVTK-----LPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDA 276
+T L ++SLE LNL ++G E L L L HL+ L L T+V
Sbjct: 339 NEITDACLMYLKGLTSLESLNLDSC-KIGDE-----GLANLAGLTHLKNLELSDTEVGSN 392
Query: 277 TLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLK 336
L LS K L L+L +TD SL +LS L+ L +L++ +T++GL + L
Sbjct: 393 GLRHLSGLKNLESLNLSFTLVTDSSLKRLSGLTSLKSLNLDARQITDAGLAAITSLTGLT 452
Query: 337 LLDLHG 342
LDL G
Sbjct: 453 HLDLFG 458
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 118/236 (50%), Gaps = 6/236 (2%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N + + YL L SLN+ C+ + L L G+T LK L+LS +V G+
Sbjct: 337 GFNEITDACLMYLKGLTSLESLNLDSCK-IGDEGLANLAGLTHLKNLELSD-TEVGSNGL 394
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
+HL + LE L LS T +T + LS L +L L+L +TD L ++ LT L +L
Sbjct: 395 RHLSGLKNLESLNLSFTLVTDSSLKRLSGLTSLKSLNLDARQITDAGLAAITSLTGLTHL 454
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK--LPNISSLECLNLSFIQQVGAETDLV 251
DL+G+++S+ GA LK F L L + G+T + NI L CL I Q T+
Sbjct: 455 DLFGARISDSGANHLKYFKNLQSLEICGGGLTDAGVKNIKDLVCLTWLNISQNCNLTNKS 514
Query: 252 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 307
L L + L L LN+ +++++ L L K L L+L + +T + +L S
Sbjct: 515 LEL--ISGLTALVSLNVSNSRITNEGLQHLKPLKNLRSLTLESCKVTASEIRKLQS 568
>gi|356519276|ref|XP_003528299.1| PREDICTED: F-box/LRR-repeat protein 14-like isoform 1 [Glycine max]
Length = 577
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 149/306 (48%), Gaps = 30/306 (9%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N ++ R +S+ A+ M+ L L++ C + L L G+T L+ L+L C
Sbjct: 181 NLTSLSFRRNDSISAQGMSAFSGLVNLVKLDLERCPGI-HGGLVHLRGLTKLESLNLKWC 239
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+TD MK L +++L+ L +S + +T GI+ L LQ L++L+L G VT L SL
Sbjct: 240 NCITDYDMKPLSELASLKSLEISSSKVTDFGISFLKGLQKLALLNLEGCLVTAACLDSLA 299
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSF 240
L L L+L +S+ G + L LNL + +T L ++ LE LNL
Sbjct: 300 ELPALSNLNLNRCNLSDNGCKKISRLENLKVLNLGFNVITDACLVHLKGLTKLESLNLDS 359
Query: 241 IQQVGAETDLVLSLTALQNLNHLE---------------------RLNLEQTQVSDATLF 279
++G E +++L L+ LN LE ++NL T +SD++L
Sbjct: 360 C-KIGDEG--LVNLAGLEQLNCLELSDTEVGSNGLHHLSGLSSLQKINLSFTMISDSSLR 416
Query: 280 PLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 339
LS L L+L +TD L L+SL+ LT+L + A +T+ G K ++L+ L+
Sbjct: 417 KLSGLSSLKSLNLDAYQITDAGLANLTSLTGLTDLDLFGARITDFGTNYLKKFKNLRSLE 476
Query: 340 LHGGWL 345
+ GG L
Sbjct: 477 ICGGVL 482
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 144/289 (49%), Gaps = 13/289 (4%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
E++ L+ N + M L L+SL ++ +VT + L G+ L L+L C+
Sbjct: 232 ESLNLKWCNCITDYDMKPLSELASLKSLEISS-SKVTDFGISFLKGLQKLALLNLEGCL- 289
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
VT A + L + L L L+ L+ +G +S L+NL VL+LG +TD L L+ L
Sbjct: 290 VTAACLDSLAELPALSNLNLNRCNLSDNGCKKISRLENLKVLNLGFNVITDACLVHLKGL 349
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSFIQ 242
TKLE L+L ++ + G L +L+ L L+ T G+ L +SSL+ +NLSF
Sbjct: 350 TKLESLNLDSCKIGDEGLVNLAGLEQLNCLELSDTEVGSNGLHHLSGLSSLQKINLSFTM 409
Query: 243 QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 302
+ SL L L+ L+ LNL+ Q++DA L L++ L L L A +TD
Sbjct: 410 ISDS------SLRKLSGLSSLKSLNLDAYQITDAGLANLTSLTGLTDLDLFGARITDFGT 463
Query: 303 HQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 351
+ L L +L I VLT++G+ + K SL L+L LT+ +
Sbjct: 464 NYLKKFKNLRSLEICGGVLTDAGVKNIKELSSLVCLNLSQNSNLTDKTL 512
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 60/128 (46%), Gaps = 2/128 (1%)
Query: 99 DCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIA 158
D ++T + L LT +T L +LDL ++TD G +L L L + LT G+
Sbjct: 430 DAYQITDAGLANLTSLTGLTDLDLFG-ARITDFGTNYLKKFKNLRSLEICGGVLTDAGVK 488
Query: 159 LLSSLQNLSVLDLG-GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 217
+ L +L L+L +TD L + LT L L++ S+++N G LK L L
Sbjct: 489 NIKELSSLVCLNLSQNSNLTDKTLELISGLTGLVSLNVSNSRITNAGLQHLKTLKNLRSL 548
Query: 218 NLAWTGVT 225
L VT
Sbjct: 549 TLESCKVT 556
>gi|388500850|gb|AFK38491.1| unknown [Medicago truncatula]
Length = 577
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 142/303 (46%), Gaps = 24/303 (7%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N ++ R +S+ A+ M+ L L++ C + + L G+T L+ L++ C
Sbjct: 181 NLTSLSFRRNDSISAQGMSAFSRLVNLVKLDLERCPGIHGGTVH-LQGLTKLESLNMKWC 239
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+TD+ +K L +++L L +S + +T GI+ L LQ L++L+L G VT L SL
Sbjct: 240 NCITDSDIKPLSELASLTSLEISCSKVTDFGISFLRGLQKLALLNLEGCLVTSACLDSLS 299
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV-----TKLPNISSLECLNLS- 239
L L L+L +S RG +L LNL + + + ++ LE LNL
Sbjct: 300 ELPALSNLNLNRCNISGRGCERFSRLEKLKVLNLGFNDIGDRCLAHMKGLTKLESLNLDS 359
Query: 240 ------FIQQVGAETDLVL-----------SLTALQNLNHLERLNLEQTQVSDATLFPLS 282
++ + L+ L L L+ LE++NL T VSD+ L L
Sbjct: 360 CKIGDEGLENLAGHKQLICLELSDTEVGNHGLEHLSGLSSLEKINLSFTVVSDSGLRKLC 419
Query: 283 TFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 342
L L+L +TD L L+SL+ LT+L + A +T+ G K ++L+ L++
Sbjct: 420 GLSSLKSLNLDAYQITDAGLATLTSLTGLTDLDLFGARITDVGTNYLKKFKNLRPLEICS 479
Query: 343 GWL 345
G L
Sbjct: 480 GGL 482
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 140/289 (48%), Gaps = 13/289 (4%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
E++ ++ N + + L L SL ++ C +VT + L G+ L L+L C+
Sbjct: 232 ESLNMKWCNCITDSDIKPLSELASLTSLEIS-CSKVTDFGISFLRGLQKLALLNLEGCL- 289
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
VT A + L + L L L+ ++ G S L+ L VL+LG + D L ++ L
Sbjct: 290 VTSACLDSLSELPALSNLNLNRCNISGRGCERFSRLEKLKVLNLGFNDIGDRCLAHMKGL 349
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSFIQ 242
TKLE L+L ++ + G L +L L L+ T G+ L +SSLE +NLSF
Sbjct: 350 TKLESLNLDSCKIGDEGLENLAGHKQLICLELSDTEVGNHGLEHLSGLSSLEKINLSFT- 408
Query: 243 QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 302
V +++ L L L+ L+ LNL+ Q++DA L L++ L L L A +TDV
Sbjct: 409 -VVSDS----GLRKLCGLSSLKSLNLDAYQITDAGLATLTSLTGLTDLDLFGARITDVGT 463
Query: 303 HQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 351
+ L L L I LT++G+ + K SL L+L LT+ +
Sbjct: 464 NYLKKFKNLRPLEICSGGLTDAGVKNIKELSSLMCLNLSQNSNLTDKTV 512
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 120/231 (51%), Gaps = 14/231 (6%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N + +A++ L SLN+ C+ + L L G L L+LS +V + G+
Sbjct: 334 GFNDIGDRCLAHMKGLTKLESLNLDSCK-IGDEGLENLAGHKQLICLELSD-TEVGNHGL 391
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
+HL +S+LEK+ LS T ++ G+ L L +L L+L +TD L +L LT L L
Sbjct: 392 EHLSGLSSLEKINLSFTVVSDSGLRKLCGLSSLKSLNLDAYQITDAGLATLTSLTGLTDL 451
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFL-----NLAWTGVTKLPNISSLECLNLSFIQQVGAET 248
DL+G+++++ G LK F L L L GV + +SSL CLNLS + +T
Sbjct: 452 DLFGARITDVGTNYLKKFKNLRPLEICSGGLTDAGVKNIKELSSLMCLNLSQNSNLTDKT 511
Query: 249 -DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLT 298
+L+ LTAL + LNL T+++ A L L T K L L+L + +T
Sbjct: 512 VELIAGLTALVS------LNLSNTRITFAGLQHLKTLKNLRFLTLESCKVT 556
>gi|168698161|ref|ZP_02730438.1| hypothetical protein GobsU_01477 [Gemmata obscuriglobus UQM 2246]
Length = 417
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 87/261 (33%), Positives = 125/261 (47%), Gaps = 25/261 (9%)
Query: 70 IELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVT 129
+ L G DA + L + + L L + + VT + + L G+ L L+L KVT
Sbjct: 150 LGLGGTKVTDA-GVKELASLKELSVLGLFAAKAVTDAGVKELAGLKALTTLELG-LTKVT 207
Query: 130 DAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK 189
DAG+K L + L L L TG+T G+ L+ L+ LSVLDLG VTD ++ L L
Sbjct: 208 DAGVKELAGLKALTTLDLHYTGVTDAGVKELAGLKALSVLDLGNTGVTDAGVKELAGLKA 267
Query: 190 LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSF--IQ 242
L L+L G++V++ G L LS LNL T VT +L +L L+LSF +
Sbjct: 268 LTTLNLGGAKVTDAGVKELAGLKALSTLNLGGTKVTDTGLKELAGFKALTTLDLSFTTLT 327
Query: 243 QVGAETDLV--------LSLTALQN--------LNHLERLNLEQTQVSDATLFPLSTFKE 286
G + LS T L + L +L L L +T V+DA L L+ K
Sbjct: 328 DAGVKELAGLTALTLLDLSGTTLTDAGVKELAPLTNLTMLYLGETGVTDAGLKELAGLKN 387
Query: 287 LIHLSLRNASLTDVSLHQLSS 307
L L L N +TD + +L++
Sbjct: 388 LTALFLFNTKVTDAGVKELTA 408
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L F+ L +L + + VT + + L G+ L L L KVTDAG+K L S+ L L
Sbjct: 117 LAGFKALTTLEL-NYTDVTDAGVKELAGLKALTTLGLGG-TKVTDAGVKELASLKELSVL 174
Query: 146 WL-SETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG 204
L + +T G+ L+ L+ L+ L+LG VTD ++ L L L LDL + V++ G
Sbjct: 175 GLFAAKAVTDAGVKELAGLKALTTLELGLTKVTDAGVKELAGLKALTTLDLHYTGVTDAG 234
Query: 205 AAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSFIQQVGAETDLVLSLTALQN 259
L LS L+L TGVT +L + +L LNL + A + L
Sbjct: 235 VKELAGLKALSVLDLGNTGVTDAGVKELAGLKALTTLNLGGAKVTDA------GVKELAG 288
Query: 260 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 319
L L LNL T+V+D L L+ FK L L L +LTD + +L+ L+ LT L +
Sbjct: 289 LKALSTLNLGGTKVTDTGLKELAGFKALTTLDLSFTTLTDAGVKELAGLTALTLLDLSGT 348
Query: 320 VLTNSGLGSFKPPRSLKLL 338
LT++G+ P +L +L
Sbjct: 349 TLTDAGVKELAPLTNLTML 367
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 114/238 (47%), Gaps = 13/238 (5%)
Query: 111 LTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLD 170
L G+ L L+L KVTD G+K L L L LS T LT G+ L+ + L+ L+
Sbjct: 69 LAGLKALTTLNLG-ATKVTDVGVKELAGFKALTTLNLSFTTLTDVGVKELAGFKALTTLE 127
Query: 171 LGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL----AWT--GV 224
L VTD ++ L L L L L G++V++ G L LS L L A T GV
Sbjct: 128 LNYTDVTDAGVKELAGLKALTTLGLGGTKVTDAGVKELASLKELSVLGLFAAKAVTDAGV 187
Query: 225 TKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTF 284
+L + +L L L + A + L L L L+L T V+DA + L+
Sbjct: 188 KELAGLKALTTLELGLTKVTDA------GVKELAGLKALTTLDLHYTGVTDAGVKELAGL 241
Query: 285 KELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 342
K L L L N +TD + +L+ L LT L++ A +T++G+ ++L L+L G
Sbjct: 242 KALSVLDLGNTGVTDAGVKELAGLKALTTLNLGGAKVTDAGVKELAGLKALSTLNLGG 299
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 126/256 (49%), Gaps = 8/256 (3%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G V + L F+ L +LN++ +T + L G L L+L+ VTDAG+
Sbjct: 81 GATKVTDVGVKELAGFKALTTLNLS-FTTLTDVGVKELAGFKALTTLELNY-TDVTDAGV 138
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDL-GGLPVTDLVLRSLQVLTKLEY 192
K L + L L L T +T G+ L+SL+ LSVL L VTD ++ L L L
Sbjct: 139 KELAGLKALTTLGLGGTKVTDAGVKELASLKELSVLGLFAAKAVTDAGVKELAGLKALTT 198
Query: 193 LDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT--KLPNISSLECLNLSFIQQVGAETDL 250
L+L ++V++ G L L+ L+L +TGVT + ++ L+ L++ + G TD
Sbjct: 199 LELGLTKVTDAGVKELAGLKALTTLDLHYTGVTDAGVKELAGLKALSVLDLGNTGV-TDA 257
Query: 251 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 310
+ L L L LNL +V+DA + L+ K L L+L +TD L +L+
Sbjct: 258 --GVKELAGLKALTTLNLGGAKVTDAGVKELAGLKALSTLNLGGTKVTDTGLKELAGFKA 315
Query: 311 LTNLSIRDAVLTNSGL 326
LT L + LT++G+
Sbjct: 316 LTTLDLSFTTLTDAGV 331
>gi|168698219|ref|ZP_02730496.1| hypothetical protein GobsU_01767 [Gemmata obscuriglobus UQM 2246]
Length = 380
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 146/290 (50%), Gaps = 10/290 (3%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+ L AF+ L +L++ D +T + L L + L +LS KVTD G+K L +I L
Sbjct: 89 LKVLVAFKSLTTLSLHDTG-ITDAGLKELAPLKNLTAFNLSNT-KVTDTGLKELTAIRNL 146
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
L L +T +T G+ L +++L+ LDL VTD L++L L +L L L+ ++V++
Sbjct: 147 TALHLRKTEITDAGLKSLPPMKDLTTLDLSDTKVTDAGLKALAPLERLTNLYLYNTEVTD 206
Query: 203 RGAAVLKMFPRLSFLNLAWTGVTK--LPNISSLECLNLSFIQQVGAETDLV-LSLTALQN 259
G L L+ L L T VT L ++ L+ L++ + ET++ L L
Sbjct: 207 TGLKELAPSKNLAVLLLYNTKVTDAGLKELAPLKSLSVLVL----GETEVTDAGLKELAP 262
Query: 260 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 319
L +L LNL T+V+DA + L+ F+ L L L ++TD + +L+ L +L +
Sbjct: 263 LKNLTALNLYGTKVTDAGVKELAPFQNLTLLDLSGTNVTDAGIKELARFKNLAHLELSST 322
Query: 320 VLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSV 369
+T+ GL + L L L T I +F K P+ +VW+ LS+
Sbjct: 323 AVTDVGLKELASLKKLTKLFLISTK-TTFAGIKEFQKAAPKCDVWNTLSL 371
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/252 (33%), Positives = 126/252 (50%), Gaps = 8/252 (3%)
Query: 94 SLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLT 153
S A RVT L L + L +DLS VT+AG+K L++ +L L L +TG+T
Sbjct: 51 SAGAAQGHRVTDEELKELLPLKSLTSIDLSHT-GVTNAGLKVLVAFKSLTTLSLHDTGIT 109
Query: 154 ADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPR 213
G+ L+ L+NL+ +L VTD L+ L + L L L +++++ G L
Sbjct: 110 DAGLKELAPLKNLTAFNLSNTKVTDTGLKELTAIRNLTALHLRKTEITDAGLKSLPPMKD 169
Query: 214 LSFLNLAWTGVTK--LPNISSLECL-NLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 270
L+ L+L+ T VT L ++ LE L NL +T L L +L L L
Sbjct: 170 LTTLDLSDTKVTDAGLKALAPLERLTNLYLYNTEVTDT----GLKELAPSKNLAVLLLYN 225
Query: 271 TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 330
T+V+DA L L+ K L L L +TD L +L+ L LT L++ +T++G+
Sbjct: 226 TKVTDAGLKELAPLKSLSVLVLGETEVTDAGLKELAPLKNLTALNLYGTKVTDAGVKELA 285
Query: 331 PPRSLKLLDLHG 342
P ++L LLDL G
Sbjct: 286 PFQNLTLLDLSG 297
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 99/201 (49%), Gaps = 27/201 (13%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGM----------- 114
N A+ LR DA + L + L +L+++D + VT + L AL +
Sbjct: 145 NLTALHLRKTEITDA-GLKSLPPMKDLTTLDLSDTK-VTDAGLKALAPLERLTNLYLYNT 202
Query: 115 ----TCLKELDLSRCV--------KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
T LKEL S+ + KVTDAG+K L + +L L L ET +T G+ L+
Sbjct: 203 EVTDTGLKELAPSKNLAVLLLYNTKVTDAGLKELAPLKSLSVLVLGETEVTDAGLKELAP 262
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT 222
L+NL+ L+L G VTD ++ L L LDL G+ V++ G L F L+ L L+ T
Sbjct: 263 LKNLTALNLYGTKVTDAGVKELAPFQNLTLLDLSGTNVTDAGIKELARFKNLAHLELSST 322
Query: 223 GVTK--LPNISSLECLNLSFI 241
VT L ++SL+ L F+
Sbjct: 323 AVTDVGLKELASLKKLTKLFL 343
>gi|46446377|ref|YP_007742.1| hypothetical protein pc0743 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400018|emb|CAF23467.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 765
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 104/313 (33%), Positives = 160/313 (51%), Gaps = 27/313 (8%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ ++L G +++ + +L + L+ LN++ T + L LT + L+ L+LS C
Sbjct: 435 QHLDLNGCHNLTDAGLTHLTSLVVLQYLNLSWNYNFTDAGLAHLTPLMALQHLNLSYCGN 494
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIA---LLSSLQNLSVLDLGGLPVTDLVLRSL 184
TDAG+ HL S++ L+ L L LT DG+A LL +LQ+L++ G L TD L L
Sbjct: 495 FTDAGLAHLTSLAALKHLDLIGCELTDDGLAHLKLLVALQHLNLSYCGKL--TDDGLAHL 552
Query: 185 QVLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWT------GVTKLPNISSLECLN 237
++L L++LDL G +++ G A LK L LNL+ G+ L +++L L+
Sbjct: 553 KLLVALQHLDLSGCDKLTGAGLAHLKFLVALQHLNLSHCGKLTDDGLVNLTPLAALRHLD 612
Query: 238 LSFIQQV-GAETDLVLSLTALQNLN--HLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 294
LS ++ GA + L ALQ+LN H +L +DA L LS L HL L +
Sbjct: 613 LSHCGKLTGAGLAHLKFLVALQHLNLSHCGKL-------TDAGLVNLSPLMALQHLDLSH 665
Query: 295 -ASLTDVSLHQLSSLSKLTNLSIRD-AVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAIL 352
+LTD L LS L L +L + LT+ GL + K +L+ LDL LT+D +
Sbjct: 666 CGNLTDAGLVNLSPLMALQHLDLSHCGNLTDDGLVNLKFLVALQHLDLSHCGNLTDDGL- 724
Query: 353 QFCKMHPRIEVWH 365
+ P I + H
Sbjct: 725 --AHLSPLIALQH 735
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/277 (33%), Positives = 139/277 (50%), Gaps = 8/277 (2%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N DA +A+L L+ LN++ C +T + L LT + L+ LDL+ C +TDAG+ H
Sbjct: 394 NFTDA-GLAHLKLLVALQHLNLSYCGNLTDAGLAHLTPLMALQHLDLNGCHNLTDAGLTH 452
Query: 136 LLSISTLEKLWLS-ETGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYL 193
L S+ L+ L LS T G+A L+ L L L+L TD L L L L++L
Sbjct: 453 LTSLVVLQYLNLSWNYNFTDAGLAHLTPLMALQHLNLSYCGNFTDAGLAHLTSLAALKHL 512
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL-NLSFIQQVGAETDLVL 252
DL G ++++ G A LK+ L LNL++ G ++ L+ L L + G +
Sbjct: 513 DLIGCELTDDGLAHLKLLVALQHLNLSYCGKLTDDGLAHLKLLVALQHLDLSGCDKLTGA 572
Query: 253 SLTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHLSLRN-ASLTDVSLHQLSSLSK 310
L L+ L L+ LNL +++D L L+ L HL L + LT L L L
Sbjct: 573 GLAHLKFLVALQHLNLSHCGKLTDDGLVNLTPLAALRHLDLSHCGKLTGAGLAHLKFLVA 632
Query: 311 LTNLSIRD-AVLTNSGLGSFKPPRSLKLLDL-HGGWL 345
L +L++ LT++GL + P +L+ LDL H G L
Sbjct: 633 LQHLNLSHCGKLTDAGLVNLSPLMALQHLDLSHCGNL 669
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 101/308 (32%), Positives = 151/308 (49%), Gaps = 27/308 (8%)
Query: 60 LEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKE 119
L KH ++L G D + + +L L+ L+++ CR T + L L + L+
Sbjct: 307 LAALKH----LDLSGCELTD-DGLVHLTPLAALQHLDLSHCRNFTDAGLAHLKLLVALQH 361
Query: 120 LDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIA---LLSSLQNLSVLDLGGLP 175
L+LS C K+TDAG+ HL + L+ L LS T G+A LL +LQ+L++ G L
Sbjct: 362 LNLSHCGKLTDAGLAHLKLLVALQHLDLSHCRNFTDAGLAHLKLLVALQHLNLSYCGNL- 420
Query: 176 VTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFLNLAWT------GVTKLP 228
TD L L L L++LDL G +++ G L L +LNL+W G+ L
Sbjct: 421 -TDAGLAHLTPLMALQHLDLNGCHNLTDAGLTHLTSLVVLQYLNLSWNYNFTDAGLAHLT 479
Query: 229 NISSLECLNLSFIQQVGAETDLVLS-LTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 287
+ +L+ LNLS+ G TD L+ LT+L L HL+ + E ++D L L L
Sbjct: 480 PLMALQHLNLSY---CGNFTDAGLAHLTSLAALKHLDLIGCE---LTDDGLAHLKLLVAL 533
Query: 288 IHLSLRN-ASLTDVSLHQLSSLSKLTNLSIRDA-VLTNSGLGSFKPPRSLKLLDLHGGWL 345
HL+L LTD L L L L +L + LT +GL K +L+ L+L
Sbjct: 534 QHLNLSYCGKLTDDGLAHLKLLVALQHLDLSGCDKLTGAGLAHLKFLVALQHLNLSHCGK 593
Query: 346 LTEDAILQ 353
LT+D ++
Sbjct: 594 LTDDGLVN 601
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 99/284 (34%), Positives = 141/284 (49%), Gaps = 22/284 (7%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N DA +A+L L+ LN++ C ++T + L L + L+ LDLS C TDAG+ H
Sbjct: 344 NFTDA-GLAHLKLLVALQHLNLSHCGKLTDAGLAHLKLLVALQHLDLSHCRNFTDAGLAH 402
Query: 136 LLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYL 193
L + L+ L LS G LT G+A L+ L L LDL G +TD L L L L+YL
Sbjct: 403 LKLLVALQHLNLSYCGNLTDAGLAHLTPLMALQHLDLNGCHNLTDAGLTHLTSLVVLQYL 462
Query: 194 DL-WGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSFIQQVGA 246
+L W ++ G A L L LNL++ G+ L ++++L+ L+L +G
Sbjct: 463 NLSWNYNFTDAGLAHLTPLMALQHLNLSYCGNFTDAGLAHLTSLAALKHLDL-----IGC 517
Query: 247 E-TDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHLSLRNAS-LTDVSLH 303
E TD L L+ L L+ LNL +++D L L L HL L LT L
Sbjct: 518 ELTD--DGLAHLKLLVALQHLNLSYCGKLTDDGLAHLKLLVALQHLDLSGCDKLTGAGLA 575
Query: 304 QLSSLSKLTNLSIRD-AVLTNSGLGSFKPPRSLKLLDL-HGGWL 345
L L L +L++ LT+ GL + P +L+ LDL H G L
Sbjct: 576 HLKFLVALQHLNLSHCGKLTDDGLVNLTPLAALRHLDLSHCGKL 619
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 138/293 (47%), Gaps = 36/293 (12%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
+ LN + +T + L AL LK L+L C +TDAG+ HL ++ L+ L LS
Sbjct: 260 IEELNFSKNAHLTDAHLLALKNCENLKVLNLQACHNLTDAGLAHLTPLAALKHLDLSGCE 319
Query: 152 LTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLK 209
LT DG+ L+ L L LDL TD L L++L L++L+L ++++ G A LK
Sbjct: 320 LTDDGLVHLTPLAALQHLDLSHCRNFTDAGLAHLKLLVALQHLNLSHCGKLTDAGLAHLK 379
Query: 210 MFPRLSFLNLAW------TGVTKLPNISSLECLNLSFIQQVGAETDLVLS-LTALQNLNH 262
+ L L+L+ G+ L + +L+ LNLS+ G TD L+ LT L L H
Sbjct: 380 LLVALQHLDLSHCRNFTDAGLAHLKLLVALQHLNLSY---CGNLTDAGLAHLTPLMALQH 436
Query: 263 LE----------------------RLNLE-QTQVSDATLFPLSTFKELIHLSLRN-ASLT 298
L+ LNL +DA L L+ L HL+L + T
Sbjct: 437 LDLNGCHNLTDAGLTHLTSLVVLQYLNLSWNYNFTDAGLAHLTPLMALQHLNLSYCGNFT 496
Query: 299 DVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 351
D L L+SL+ L +L + LT+ GL K +L+ L+L LT+D +
Sbjct: 497 DAGLAHLTSLAALKHLDLIGCELTDDGLAHLKLLVALQHLNLSYCGKLTDDGL 549
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 103/206 (50%), Gaps = 10/206 (4%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ ++L G + + +A+L L+ LN++ C ++T L LT + L+ LDLS C K
Sbjct: 559 QHLDLSGCDKLTGAGLAHLKFLVALQHLNLSHCGKLTDDGLVNLTPLAALRHLDLSHCGK 618
Query: 128 VTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQ 185
+T AG+ HL + L+ L LS G LT G+ LS L L LDL +TD L +L
Sbjct: 619 LTGAGLAHLKFLVALQHLNLSHCGKLTDAGLVNLSPLMALQHLDLSHCGNLTDAGLVNLS 678
Query: 186 VLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFL------NLAWTGVTKLPNISSLECLNL 238
L L++LDL +++ G LK L L NL G+ L + +L+ L+
Sbjct: 679 PLMALQHLDLSHCGNLTDDGLVNLKFLVALQHLDLSHCGNLTDDGLAHLSPLIALQHLDR 738
Query: 239 SFIQQVGAETDLVLSLTALQNLNHLE 264
S + + L LT+L +L HL+
Sbjct: 739 SKYNNLTDGSGLA-HLTSLVDLQHLD 763
>gi|149174587|ref|ZP_01853213.1| hypothetical protein PM8797T_09949 [Planctomyces maris DSM 8797]
gi|148846697|gb|EDL61034.1| hypothetical protein PM8797T_09949 [Planctomyces maris DSM 8797]
Length = 540
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 140/270 (51%), Gaps = 18/270 (6%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
E++E EN D + +A+L L SL + D RV+ + L L + L+ LDL
Sbjct: 274 ESLEFARENISD-KGVAHLKGLLNLTSLRL-DGSRVSDAGLVHLAKLQKLQSLDLGNT-S 330
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
++D G+ HL +++L+ L LS+T ++ DG+ LS LQNL L L ++ + L SL+ L
Sbjct: 331 ISDTGLIHLQELTSLKSLDLSDTAVSDDGLIHLSRLQNLESLYLRSTNLSGVGLSSLKNL 390
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNL--SF 240
+ L+YLD+ S+++++G + L L L T G+ L +++L+ L+L +
Sbjct: 391 SMLQYLDMGYSKMNDQGLIAVAELGSLDSLGLFATPITDQGLVHLSGLTNLKKLDLQETS 450
Query: 241 IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 300
I G L L +L L+ L+LE T+++DA L L EL L L +++D
Sbjct: 451 ISDAG--------LVHLSHLAGLKVLDLEGTRITDAGLIHLQGLNELEQLELDKTAVSDA 502
Query: 301 SLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 330
L L L+KL L + +T +G+ +
Sbjct: 503 GLKHLKGLTKLQFLQYEETQITEAGINDLR 532
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 112/223 (50%), Gaps = 11/223 (4%)
Query: 125 CVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL 184
+++D G+ HL + LE L + ++ G+A L L NL+ L L G V+D L L
Sbjct: 256 GAEISDVGLAHLQDLKKLESLEFARENISDKGVAHLKGLLNLTSLRLDGSRVSDAGLVHL 315
Query: 185 QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLS 239
L KL+ LDL + +S+ G L+ L L+L+ T G+ L + +LE L L
Sbjct: 316 AKLQKLQSLDLGNTSISDTGLIHLQELTSLKSLDLSDTAVSDDGLIHLSRLQNLESLYLR 375
Query: 240 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 299
G + L++L+NL+ L+ L++ ++++D L ++ L L L +TD
Sbjct: 376 STNLSG------VGLSSLKNLSMLQYLDMGYSKMNDQGLIAVAELGSLDSLGLFATPITD 429
Query: 300 VSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 342
L LS L+ L L +++ ++++GL LK+LDL G
Sbjct: 430 QGLVHLSGLTNLKKLDLQETSISDAGLVHLSHLAGLKVLDLEG 472
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 82/162 (50%), Gaps = 3/162 (1%)
Query: 65 HNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSR 124
N E++ LR N + ++ L L+ L++ ++ L A+ + L L L
Sbjct: 367 QNLESLYLRSTN-LSGVGLSSLKNLSMLQYLDMG-YSKMNDQGLIAVAELGSLDSLGLF- 423
Query: 125 CVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL 184
+TD G+ HL ++ L+KL L ET ++ G+ LS L L VLDL G +TD L L
Sbjct: 424 ATPITDQGLVHLSGLTNLKKLDLQETSISDAGLVHLSHLAGLKVLDLEGTRITDAGLIHL 483
Query: 185 QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK 226
Q L +LE L+L + VS+ G LK +L FL T +T+
Sbjct: 484 QGLNELEQLELDKTAVSDAGLKHLKGLTKLQFLQYEETQITE 525
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 111/249 (44%), Gaps = 20/249 (8%)
Query: 110 ALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVL 169
A++ + LK + L + + G KH+ + LE L L T +T + + +L+NL L
Sbjct: 104 AISQLKNLKSIHL-LITTIEEGGRKHITGLQNLELLSLRGTTITDSDLKYVGALKNLQKL 162
Query: 170 DLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL--------AW 221
+L ++D L L+ L++L L+L G+Q+ G LK L L+L W
Sbjct: 163 NLNNTAISDAGLAHLRGLSELRVLELEGTQLDGTGLVYLKHLNHLEELDLDNYNNNFVGW 222
Query: 222 T-GVTKLPNISSLECLNLSFI---------QQVGAETDLVLSLTALQNLNHLERLNLEQT 271
G ++ + L I GAE V L LQ+L LE L +
Sbjct: 223 NDGESENEPRPQIRDAGLKHIGKLKHLKKLSLFGAEISDV-GLAHLQDLKKLESLEFARE 281
Query: 272 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP 331
+SD + L L L L + ++D L L+ L KL +L + + ++++GL +
Sbjct: 282 NISDKGVAHLKGLLNLTSLRLDGSRVSDAGLVHLAKLQKLQSLDLGNTSISDTGLIHLQE 341
Query: 332 PRSLKLLDL 340
SLK LDL
Sbjct: 342 LTSLKSLDL 350
>gi|149176715|ref|ZP_01855326.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
gi|148844356|gb|EDL58708.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
Length = 1266
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 144/297 (48%), Gaps = 26/297 (8%)
Query: 69 AIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV 128
+I G VDA+ + +L L+S++ +T L+G++ L+ L L +
Sbjct: 433 SIRFFGNQIVDAQ-VKHLKHVPRLKSVSFISTS-ITDDCTRHLSGLSELETLQLPGTA-I 489
Query: 129 TDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLT 188
TD G+ L + +LE L LS +G+T G+ L L L+LG VTD L L+ L
Sbjct: 490 TDKGLATLNDLKSLENLDLSRSGITDAGLVSLKKFPQLKTLNLGSTRVTDAGLTHLKALP 549
Query: 189 KLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT--------GVTKLPNISSLEC----L 236
KLE L L+ + V+ G + L P+L L+L+ T V+KL ++ SL +
Sbjct: 550 KLESLKLYNTSVTGTGLSELVTLPKLKTLDLSLTPLTETGLQTVSKLIHLQSLSLTKTKI 609
Query: 237 NLSFIQQVGAETDLV-----------LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFK 285
N + ++ + T+L +L ++ L L LNL +T+++D + L K
Sbjct: 610 NSAGVKHLVPLTELTTLKLDYTQIDDTALASIAKLTKLRSLNLRKTEITDTGMVHLENLK 669
Query: 286 ELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 342
L LSL +++ L L SL +L L +R+ + ++GL + +LK LDL+G
Sbjct: 670 PLKVLSLDETRVSNAGLKSLQSLQQLYRLGLRETDIDDAGLKTLSSIFNLKSLDLYG 726
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 151/327 (46%), Gaps = 30/327 (9%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
+ +++ + +L L +L + D ++ +AL ++ +T L+ L+L R ++TD GM
Sbjct: 606 KTKINSAGVKHLVPLTELTTLKL-DYTQIDDTALASIAKLTKLRSLNL-RKTEITDTGMV 663
Query: 135 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 194
HL ++ L+ L L ET ++ G+ L SLQ L L L + D L++L + L+ LD
Sbjct: 664 HLENLKPLKVLSLDETRVSNAGLKSLQSLQQLYRLGLRETDIDDAGLKTLSSIFNLKSLD 723
Query: 195 LWGSQVSNRGAAVL-KMFPRLSFLNLAWTGVT---------KLPNI---------SSLEC 235
L+G++V++ G A + + LNL TGVT + PN S ++
Sbjct: 724 LYGTKVTDTGMAYFHDKLIKPTDLNLHGTGVTEAGVAMLKQQCPNCRIQASPPLDSGIQS 783
Query: 236 LNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVS--DATLFPLSTFKELIHLSLR 293
+ + G T L A Q + L + ++S D L L+ K L L +
Sbjct: 784 ILAKLKKSGGFYTRRRLPENAEQLVVRFYPLPGREKKLSPLDERLSLLNGLKTLYELDVA 843
Query: 294 NASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQ 353
A LTD L L + +L L + T GL + L++L + +T D ++Q
Sbjct: 844 GADLTDAGLKHLKHVPELRVLKLNGGNFTEEGLKQLTQLKKLEVLQIENAG-ITNDQLIQ 902
Query: 354 FCKMHPRIEVWHELSVICPSDQIGSNG 380
+M +++++ I P +QI +G
Sbjct: 903 LKEM-TQLKIF-----ILPQNQITEHG 923
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 137/305 (44%), Gaps = 58/305 (19%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
+ SV + + L + L SL + +T +AL LTG++ L L+L+R VTDAGM+
Sbjct: 295 QTSVSDQGLQILNELKGLTSLTIMQSP-ITDAALPHLTGLSRLTSLNLARTA-VTDAGME 352
Query: 135 HLLSISTLEKLWLSETGLTADGIALL---------------------------------- 160
H++ + L+KL L TG+T+ G+A +
Sbjct: 353 HIIKLKQLKKLNLISTGVTSAGMARVHAALPKCKIETGKATAPGDSTQAQAAIAALKAQG 412
Query: 161 SSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA 220
+ +QN V G L + + T + + +G+Q+ + LK PRL ++
Sbjct: 413 AHIQNQRVFKNGKL--------TSEYFTSIRF---FGNQIVDAQVKHLKHVPRLKSVSFI 461
Query: 221 WTGVTK-----LPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
T +T L +S LE L L A TD L L +L LE L+L ++ ++D
Sbjct: 462 STSITDDCTRHLSGLSELETLQLPGT----AITD--KGLATLNDLKSLENLDLSRSGITD 515
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSL 335
A L L F +L L+L + +TD L L +L KL +L + + +T +GL L
Sbjct: 516 AGLVSLKKFPQLKTLNLGSTRVTDAGLTHLKALPKLESLKLYNTSVTGTGLSELVTLPKL 575
Query: 336 KLLDL 340
K LDL
Sbjct: 576 KTLDL 580
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 121/255 (47%), Gaps = 27/255 (10%)
Query: 111 LTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLD 170
L G+ L ELD++ +TDAG+KHL + L L L+ T +G+ L+ L+ L VL
Sbjct: 831 LNGLKTLYELDVA-GADLTDAGLKHLKHVPELRVLKLNGGNFTEEGLKQLTQLKKLEVLQ 889
Query: 171 LGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNI 230
+ +T+ L L+ +T+L+ L +Q++ G + L +
Sbjct: 890 IENAGITNDQLIQLKEMTQLKIFILPQNQITEHG-------------------LKHLSGL 930
Query: 231 SSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 290
++L+ LNLS Q +D ++ L +L+NL L LE T+V+D L L L L
Sbjct: 931 TNLKVLNLS---QNRIYSDGMVHLASLENL---RSLALEHTRVADQGLEDLLRLPRLNTL 984
Query: 291 SLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 350
L ++TD L ++ L LS+ +T+ GL + R L LDL+ ++ED
Sbjct: 985 ILDGTTITDGGTPLLRKMTSLGMLSLNSTYITDRGLKDLETLRGLYRLDLNDTK-VSEDG 1043
Query: 351 ILQFCKMHPRIEVWH 365
+ F + P+ + +
Sbjct: 1044 VKNFQRSQPKCNIEY 1058
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 136/289 (47%), Gaps = 41/289 (14%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC---------- 125
N + + ++ + +R L + + ++ S L +LT + L+ L+ C
Sbjct: 66 NKITDTQIKFINHLKDIRKLGFYNVK-ISGSGLQSLTNLKHLQNLEFQNCPLEDDAFQHL 124
Query: 126 -------------VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLG 172
V +TD + HL ++ LE LWL T ++ G+ L++L+ L+ L+L
Sbjct: 125 KQFPALTHLFVRHVPLTDQCLVHLKDLTQLEVLWLFATQISDSGLEHLNNLKELNSLNLY 184
Query: 173 GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK--------MFPR---LSFLNLAW 221
+++ L L L KL+ L++ ++V++ G A L+ +F R + L +A
Sbjct: 185 QTKISNAGLTHLSELKKLKQLEVNETKVTSAGVAELQEAIPECKILFDRPVLPAHLKVAR 244
Query: 222 TGVTKLPNISSLECLN----LSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDAT 277
V L + L+ LS I D SL L+ L+ L+ L L QT VSD
Sbjct: 245 Q-VKSLGGFVRYQDLDQHRLLSSISLSRPHID-DKSLACLKGLSGLKSLTLNQTSVSDQG 302
Query: 278 LFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 326
L L+ K L L++ + +TD +L L+ LS+LT+L++ +T++G+
Sbjct: 303 LQILNELKGLTSLTIMQSPITDAALPHLTGLSRLTSLNLARTAVTDAGM 351
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 138/295 (46%), Gaps = 22/295 (7%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
+N + + +L L+ LN++ R+ S + L + L+ L L +V D G++
Sbjct: 916 QNQITEHGLKHLSGLTNLKVLNLSQ-NRIYSDGMVHLASLENLRSLALEH-TRVADQGLE 973
Query: 135 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 194
LL + L L L T +T G LL + +L +L L +TD L+ L+ L L LD
Sbjct: 974 DLLRLPRLNTLILDGTTITDGGTPLLRKMTSLGMLSLNSTYITDRGLKDLETLRGLYRLD 1033
Query: 195 LWGSQVSNRGAAVLKMFPRLS-FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLV-- 251
L ++VS G +K F R N+ + P SSL+ + + +++ GA +++
Sbjct: 1034 LNDTKVSEDG---VKNFQRSQPKCNIEYAA----PLASSLQYV-IQELKEAGANVNVINQ 1085
Query: 252 ---LSLTALQNLNHLERL-----NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLH 303
+ +++ NHL+ + E+ +V D+ L +S K+L LS+ A + L
Sbjct: 1086 GHHYVIESVEFPNHLQGIFAIHNRAEKAKVFDSCLKRISEMKDLKRLSMHWAEFDNTKLE 1145
Query: 304 QLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMH 358
+ +L+ L+ L + + + + G+ K +L+ L L +T+ + Q ++
Sbjct: 1146 YIKNLTYLSELDLSGSRIPDQGIKDLKGLVNLQKLKLEHTQ-ITDAGVAQLAQLQ 1199
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 124/292 (42%), Gaps = 49/292 (16%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 176
L + LSR + D + L +S L+ L L++T ++ G+ +L+ L+ L+ L + P+
Sbjct: 264 LSSISLSRP-HIDDKSLACLKGLSGLKSLTLNQTSVSDQGLQILNELKGLTSLTIMQSPI 322
Query: 177 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK---------- 226
TD L L L++L L+L + V++ G + +L LNL TGVT
Sbjct: 323 TDAALPHLTGLSRLTSLNLARTAVTDAGMEHIIKLKQLKKLNLISTGVTSAGMARVHAAL 382
Query: 227 -----------LPNISSLECLNLSFIQQVGAE-------------TDLVLSLTALQN--- 259
P S+ ++ ++ GA ++ S+ N
Sbjct: 383 PKCKIETGKATAPGDSTQAQAAIAALKAQGAHIQNQRVFKNGKLTSEYFTSIRFFGNQIV 442
Query: 260 ------LNHLERL---NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 310
L H+ RL + T ++D LS EL L L ++TD L L+ L
Sbjct: 443 DAQVKHLKHVPRLKSVSFISTSITDDCTRHLSGLSELETLQLPGTAITDKGLATLNDLKS 502
Query: 311 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIE 362
L NL + + +T++GL S K LK L+L G DA L K P++E
Sbjct: 503 LENLDLSRSGITDAGLVSLKKFPQLKTLNL--GSTRVTDAGLTHLKALPKLE 552
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 105 SSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQ 164
++ L + +T L ELDLS ++ D G+K L + L+KL L T +T G+A L+ LQ
Sbjct: 1141 NTKLEYIKNLTYLSELDLSGS-RIPDQGIKDLKGLVNLQKLKLEHTQITDAGVAQLAQLQ 1199
Query: 165 --NLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPR 213
L LDL T L SL+ + +L +L L ++S AA L+ F +
Sbjct: 1200 LNRLYSLDLDHSKTTAACLESLKDMQRLRFLSLQHLELS---AADLEKFKQ 1247
Score = 38.5 bits (88), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%)
Query: 253 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 312
L +L NL HL+ L + + D L F L HL +R+ LTD L L L++L
Sbjct: 96 GLQSLTNLKHLQNLEFQNCPLEDDAFQHLKQFPALTHLFVRHVPLTDQCLVHLKDLTQLE 155
Query: 313 NLSIRDAVLTNSGLGSFKPPRSLKLLDLH 341
L + +++SGL + L L+L+
Sbjct: 156 VLWLFATQISDSGLEHLNNLKELNSLNLY 184
>gi|357164542|ref|XP_003580088.1| PREDICTED: insulin-like growth factor-binding protein complex acid
labile subunit-like [Brachypodium distachyon]
Length = 580
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 141/297 (47%), Gaps = 40/297 (13%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+ +L R L +LN+ C +T S + L+ +T L+EL LS C K++D G+ +L +S L
Sbjct: 225 LVHLKGLRKLETLNMRYCNCITDSDMKYLSDLTNLRELQLS-CCKISDIGVSYLKGLSKL 283
Query: 143 EKLWLSETGLTA------------------------DGIALLSSLQNLSVLDLGGLPVTD 178
L L +TA +G L L L VL+LG +TD
Sbjct: 284 AHLNLEGCAVTAACLEAISGLASLILLNLNRCGIYDEGCENLEGLVKLKVLNLGFNHITD 343
Query: 179 LVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSL 233
L L+ L LE L+L ++ + G LK +L L L+ T G+ L + +L
Sbjct: 344 ACLVHLKELVSLECLNLDSCKIGDEGLLHLKGLLQLRSLELSDTEVGSNGLRHLSGLRNL 403
Query: 234 ECLNLSF--IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 291
+ +NLSF + +G L + LN L+ LNL+ Q++D L L+ L HL
Sbjct: 404 QSMNLSFTLVTDIG--------LKKVAGLNSLKSLNLDNRQITDNGLAALAGLTGLTHLD 455
Query: 292 LRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 348
L A +TD + L +L +L + ++T++G+ + K ++L LL+L LT+
Sbjct: 456 LFGARITDSGTNCLRYFKELQSLELCGGLITDAGVKNIKDLKALTLLNLSQNGNLTD 512
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 148/310 (47%), Gaps = 27/310 (8%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N ++ L+ +V AE L +L++ C ++ L L G+ L+ L++ C
Sbjct: 184 NLTSLSLKKCAAVTAEGAKAFADLVNLVNLDLERCPKI-HGGLVHLKGLRKLETLNMRYC 242
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+TD+ MK+L ++ L +L LS ++ G++ L L L+ L+L G VT L ++
Sbjct: 243 NCITDSDMKYLSDLTNLRELQLSCCKISDIGVSYLKGLSKLAHLNLEGCAVTAACLEAIS 302
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSF 240
L L L+L + + G L+ +L LNL + +T L + SLECLNL
Sbjct: 303 GLASLILLNLNRCGIYDEGCENLEGLVKLKVLNLGFNHITDACLVHLKELVSLECLNLDS 362
Query: 241 IQQVGAET-----------DLVLS--------LTALQNLNHLERLNLEQTQVSDATLFPL 281
++G E L LS L L L +L+ +NL T V+D L +
Sbjct: 363 C-KIGDEGLLHLKGLLQLRSLELSDTEVGSNGLRHLSGLRNLQSMNLSFTLVTDIGLKKV 421
Query: 282 STFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 341
+ L L+L N +TD L L+ L+ LT+L + A +T+SG + + L+ L+L
Sbjct: 422 AGLNSLKSLNLDNRQITDNGLAALAGLTGLTHLDLFGARITDSGTNCLRYFKELQSLELC 481
Query: 342 GGWLLTEDAI 351
GG L+T+ +
Sbjct: 482 GG-LITDAGV 490
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 126/248 (50%), Gaps = 10/248 (4%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N + + +L L LN+ C+ + L L G+ L+ L+LS +V G+
Sbjct: 337 GFNHITDACLVHLKELVSLECLNLDSCK-IGDEGLLHLKGLLQLRSLELSD-TEVGSNGL 394
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
+HL + L+ + LS T +T G+ ++ L +L L+L +TD L +L LT L +L
Sbjct: 395 RHLSGLRNLQSMNLSFTLVTDIGLKKVAGLNSLKSLNLDNRQITDNGLAALAGLTGLTHL 454
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK--LPNISSLECLNLSFIQQVGAETDLV 251
DL+G+++++ G L+ F L L L +T + NI L+ L L + Q G TD
Sbjct: 455 DLFGARITDSGTNCLRYFKELQSLELCGGLITDAGVKNIKDLKALTLLNLSQNGNLTDRT 514
Query: 252 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLT--DVSLHQLSSLS 309
L L + L L LNL T+VS+A L L + L LSL + +T ++ QL+SL
Sbjct: 515 LEL--ISGLTALVSLNLSNTRVSNAGLHHLKLLQNLRSLSLDSCKVTASEIKKIQLASLP 572
Query: 310 KLTNLSIR 317
L +S+R
Sbjct: 573 NL--ISVR 578
>gi|46446666|ref|YP_008031.1| hypothetical protein pc1032 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400307|emb|CAF23756.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 734
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 151/293 (51%), Gaps = 23/293 (7%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
+N DA +A+L + L+ LN+++ + +T + L LT +T L+ L+L C K TD G+
Sbjct: 435 QNFTDA-GLAHLTSLTGLQYLNLSEYKNLTDAGLAHLTPLTALQHLNLCNCRKFTDNGLA 493
Query: 135 HLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEY 192
HL ++ L+ L LS LT DG+A L+ L L L L +TD L L LT L+Y
Sbjct: 494 HLTPLTALQHLDLSHCKNLTDDGLAHLAPLTGLQRLVLSWCDKLTDAGLAHLTPLTALQY 553
Query: 193 LDLWGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSFIQQVGA 246
LDL ++++ G A L L L L + G+ L +++L+ L L ++
Sbjct: 554 LDLSCCEITDAGLAHLTPLTGLQHLVLVYCWQLTDAGLAHLTPLTTLQYLYLGSCNRL-- 611
Query: 247 ETDLVLS----LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL-RNASLTDVS 301
TD L+ LTALQ+L LN + +++D L L+ L HL+L R LTD
Sbjct: 612 -TDAGLAHLAPLTALQHL----ALN-DCRKLTDTGLAHLTPLTALQHLTLNRCEKLTDDG 665
Query: 302 LHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQF 354
L L L+ L L + +T++GL +L+ LDL+G +T+D + +F
Sbjct: 666 LAHLKPLAALQYLDLSYCEITDAGLAHLTHLMALQRLDLYGRE-ITDDGLERF 717
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 102/313 (32%), Positives = 159/313 (50%), Gaps = 38/313 (12%)
Query: 73 RGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAG 132
R ++ DA +++L L+ LN+++C ++T + L LT +T L+ LDLSRC +TDAG
Sbjct: 358 RCKDLTDA-GLSHLKPLTALQHLNLSECWKLTDAGLAHLTPLTALQHLDLSRCNSLTDAG 416
Query: 133 MKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKL 190
+ HL ++ L+ L LS+ T G+A L+SL L L+L +TD L L LT L
Sbjct: 417 LAHLTPLTALQHLDLSDCQNFTDAGLAHLTSLTGLQYLNLSEYKNLTDAGLAHLTPLTAL 476
Query: 191 EYLDLWGS-QVSNRGAAVLKMFPRLSFL------NLAWTGVTKLPNISSLECLNLSFIQQ 243
++L+L + ++ G A L L L NL G+ L ++ L+ L LS+ +
Sbjct: 477 QHLNLCNCRKFTDNGLAHLTPLTALQHLDLSHCKNLTDDGLAHLAPLTGLQRLVLSWCDK 536
Query: 244 VGAETDLVLS----LTALQNLN------------HLERLNLEQT-------QVSDATLFP 280
+ TD L+ LTALQ L+ HL L Q Q++DA L
Sbjct: 537 L---TDAGLAHLTPLTALQYLDLSCCEITDAGLAHLTPLTGLQHLVLVYCWQLTDAGLAH 593
Query: 281 LSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDA-VLTNSGLGSFKPPRSLKLL 338
L+ L +L L + + LTD L L+ L+ L +L++ D LT++GL P +L+ L
Sbjct: 594 LTPLTTLQYLYLGSCNRLTDAGLAHLAPLTALQHLALNDCRKLTDTGLAHLTPLTALQHL 653
Query: 339 DLHGGWLLTEDAI 351
L+ LT+D +
Sbjct: 654 TLNRCEKLTDDGL 666
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 102/306 (33%), Positives = 150/306 (49%), Gaps = 28/306 (9%)
Query: 67 AEAIELRGENSVDAEW--------MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLK 118
A L G +D W +A+L L+ LN+ C + + L LT +T L+
Sbjct: 293 AHLTPLTGLQHLDLSWCSSLTDAGLAHLTPLTALQHLNLNRCEYLKDAGLAHLTPLTGLQ 352
Query: 119 ELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGL-PV 176
L+L+RC +TDAG+ HL ++ L+ L LSE LT G+A L+ L L LDL +
Sbjct: 353 HLNLNRCKDLTDAGLSHLKPLTALQHLNLSECWKLTDAGLAHLTPLTALQHLDLSRCNSL 412
Query: 177 TDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFLNLAW------TGVTKLPN 229
TD L L LT L++LDL Q ++ G A L L +LNL+ G+ L
Sbjct: 413 TDAGLAHLTPLTALQHLDLSDCQNFTDAGLAHLTSLTGLQYLNLSEYKNLTDAGLAHLTP 472
Query: 230 ISSLECLNLSFIQQVGAETDLVLS----LTALQNLNHLERLNLEQTQVSDATLFPLSTFK 285
+++L+ LNL ++ TD L+ LTALQ+L+ NL T A L PL+ +
Sbjct: 473 LTALQHLNLCNCRKF---TDNGLAHLTPLTALQHLDLSHCKNL--TDDGLAHLAPLTGLQ 527
Query: 286 ELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 345
L+ LS + LTD L L+ L+ L L + +T++GL P L+ L L W
Sbjct: 528 RLV-LSWCD-KLTDAGLAHLTPLTALQYLDLSCCEITDAGLAHLTPLTGLQHLVLVYCWQ 585
Query: 346 LTEDAI 351
LT+ +
Sbjct: 586 LTDAGL 591
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 135/274 (49%), Gaps = 35/274 (12%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
+N DA +A+L L+ LN+ +CR+ T + L LT +T L+ LDLS C +TD G+
Sbjct: 460 KNLTDA-GLAHLTPLTALQHLNLCNCRKFTDNGLAHLTPLTALQHLDLSHCKNLTDDGLA 518
Query: 135 HLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
HL ++ L++L LS LT G+A L+ L L LDL +TD L L LT L++L
Sbjct: 519 HLAPLTGLQRLVLSWCDKLTDAGLAHLTPLTALQYLDLSCCEITDAGLAHLTPLTGLQHL 578
Query: 194 DL-WGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSFIQQVGA 246
L + Q+++ G A L L +L L G+ L +++L+ L L+ +++
Sbjct: 579 VLVYCWQLTDAGLAHLTPLTTLQYLYLGSCNRLTDAGLAHLAPLTALQHLALNDCRKL-- 636
Query: 247 ETDLVLS----LTALQNLN-------------------HLERLNLEQTQVSDATLFPLST 283
TD L+ LTALQ+L L+ L+L +++DA L L+
Sbjct: 637 -TDTGLAHLTPLTALQHLTLNRCEKLTDDGLAHLKPLAALQYLDLSYCEITDAGLAHLTH 695
Query: 284 FKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 317
L L L +TD L + +L+ NL IR
Sbjct: 696 LMALQRLDLYGREITDDGLERFETLAASFNLEIR 729
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/268 (33%), Positives = 136/268 (50%), Gaps = 21/268 (7%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+A+L L+ L+++DC ++T L LT +T L+ LDLS C +TDAG+ HL ++ L
Sbjct: 267 LAHLTPLTTLQYLDLSDCEKLTDDGLAHLTPLTGLQHLDLSWCSSLTDAGLAHLTPLTAL 326
Query: 143 EKLWLSETGLTAD-GIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDL---WG 197
+ L L+ D G+A L+ L L L+L +TD L L+ LT L++L+L W
Sbjct: 327 QHLNLNRCEYLKDAGLAHLTPLTGLQHLNLNRCKDLTDAGLSHLKPLTALQHLNLSECW- 385
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSFIQQ-VGAETDL 250
++++ G A L L L+L+ G+ L +++L+ L+LS Q A
Sbjct: 386 -KLTDAGLAHLTPLTALQHLDLSRCNSLTDAGLAHLTPLTALQHLDLSDCQNFTDAGLAH 444
Query: 251 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLS 309
+ SLT LQ LN E NL +DA L L+ L HL+L N TD L L+ L+
Sbjct: 445 LTSLTGLQYLNLSEYKNL-----TDAGLAHLTPLTALQHLNLCNCRKFTDNGLAHLTPLT 499
Query: 310 KLTNLSIRDAV-LTNSGLGSFKPPRSLK 336
L +L + LT+ GL P L+
Sbjct: 500 ALQHLDLSHCKNLTDDGLAHLAPLTGLQ 527
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 155/308 (50%), Gaps = 17/308 (5%)
Query: 56 FPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMT 115
F ++ F E + + + L + L+ L+ C VT + L LT +T
Sbjct: 215 FEKIVNHFSKKIETLNFSENARLTDAHLLTLKNCKNLKILHFKKCWGVTDAGLAHLTPLT 274
Query: 116 CLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS-ETGLTADGIALLSSLQNLSVLDLGGL 174
L+ LDLS C K+TD G+ HL ++ L+ L LS + LT G+A L+ L L L+L
Sbjct: 275 TLQYLDLSDCEKLTDDGLAHLTPLTGLQHLDLSWCSSLTDAGLAHLTPLTALQHLNLNRC 334
Query: 175 P-VTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFLNLA--W----TGVTK 226
+ D L L LT L++L+L + +++ G + LK L LNL+ W G+
Sbjct: 335 EYLKDAGLAHLTPLTGLQHLNLNRCKDLTDAGLSHLKPLTALQHLNLSECWKLTDAGLAH 394
Query: 227 LPNISSLECLNLSFIQQVGAETDLVLS-LTALQNLNHLERLNLEQTQVSDATLFPLSTFK 285
L +++L+ L+LS + + TD L+ LT L L HL+ + + +DA L L++
Sbjct: 395 LTPLTALQHLDLS---RCNSLTDAGLAHLTPLTALQHLDLSDCQ--NFTDAGLAHLTSLT 449
Query: 286 ELIHLSLRN-ASLTDVSLHQLSSLSKLTNLSIRDA-VLTNSGLGSFKPPRSLKLLDLHGG 343
L +L+L +LTD L L+ L+ L +L++ + T++GL P +L+ LDL
Sbjct: 450 GLQYLNLSEYKNLTDAGLAHLTPLTALQHLNLCNCRKFTDNGLAHLTPLTALQHLDLSHC 509
Query: 344 WLLTEDAI 351
LT+D +
Sbjct: 510 KNLTDDGL 517
>gi|46447560|ref|YP_008925.1| hypothetical protein pc1926 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401201|emb|CAF24650.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 761
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 155/299 (51%), Gaps = 21/299 (7%)
Query: 54 LIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTG 113
L + +L +H ++LRG + + +++L L+ L+++ C +T + L L
Sbjct: 287 LAYLEILTALQH----LDLRGCDKITDAGLSHLTPLVALQYLSLSQCWNLTDAGLIHLKP 342
Query: 114 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG 172
+T L+ L+LSRC K+TDAG++HL +++L+ L LS LT G+A L+ L L LDL
Sbjct: 343 LTALQYLNLSRCNKLTDAGLEHLALLTSLQHLNLSSCKKLTDAGLAHLTPLMALQHLDLS 402
Query: 173 GL-PVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW------TGV 224
+TD L L LT L+YL+L ++N G L L +LNL+ G+
Sbjct: 403 ICNKLTDRGLTHLNPLTALQYLNLSQCDNITNAGLEHLIPLTALQYLNLSQCEKLTDAGL 462
Query: 225 TKLPNISSLECLNLSFIQQV-GAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLST 283
L +++L+ L+LS+ ++ A + LT LQ L+ L N +++DA L L+
Sbjct: 463 EHLTPLTALQQLDLSWCYKLTDAGFAHLTPLTGLQYLD-LSHCN----KLTDAGLAHLTP 517
Query: 284 FKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDL 340
L +L L N LTD L L+ L L +L++ LT++G P +L+ LDL
Sbjct: 518 LTALQYLDLSNCIKLTDDGLAHLTPLMALQHLNLSSCYKLTDAGFAHLSPLTALQRLDL 576
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 92/277 (33%), Positives = 138/277 (49%), Gaps = 28/277 (10%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
A+L L+ L+++ C ++T + L LT +T L+ LDLS C+K+TD G+ HL + L
Sbjct: 487 FAHLTPLTGLQYLDLSHCNKLTDAGLAHLTPLTALQYLDLSNCIKLTDDGLAHLTPLMAL 546
Query: 143 EKLWLSET-GLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDL-WGSQ 199
+ L LS LT G A LS L L LDL +TD L L LT L+ LDL +
Sbjct: 547 QHLNLSSCYKLTDAGFAHLSPLTALQRLDLSYCQNLTDAELAHLTPLTALQRLDLRYCEN 606
Query: 200 VSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQN 259
+++ G LK+ L +LNL G ++ G + LT L
Sbjct: 607 LTDAGLVHLKLLTDLQYLNLRGCG----------------YLTDAG-----LAHLTTLSG 645
Query: 260 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSL-RNASLTDVSLHQLSSLSKLTNLSIRD 318
L HL+ + E+ ++DA L L +L +L+L R +LTD L L+ L+ L +L +R
Sbjct: 646 LQHLDLSSCEK--LTDAGLVHLKLLTDLQYLNLSRCENLTDEGLALLTPLTALQHLKLRY 703
Query: 319 AV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQF 354
+ LT++GL P L+ LDL W LT+ ++
Sbjct: 704 CINLTDAGLAHLTPLTGLQRLDLSQCWNLTDAGLIHL 740
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 158/305 (51%), Gaps = 26/305 (8%)
Query: 62 VFKHNAEAIE-LRGENSV---DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCL 117
+ H ++ IE L N V +A +A L + L++L++ C+ +T L LT +T L
Sbjct: 188 IINHFSKKIERLNFSNQVYLTNAHLLA-LKDCKNLKALHLEACQALTDDGLEHLTLLTAL 246
Query: 118 KELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLGGL-P 175
+ L+LSRC +TDAG+ HL ++ L+ L LS T G+A L L L LDL G
Sbjct: 247 QHLNLSRCKNLTDAGLAHLTPLTGLQYLDLSHCNKFTDAGLAYLEILTALQHLDLRGCDK 306
Query: 176 VTDLVLRSLQVLTKLEYLDL---WGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTK 226
+TD L L L L+YL L W +++ G LK L +LNL+ G+
Sbjct: 307 ITDAGLSHLTPLVALQYLSLSQCWN--LTDAGLIHLKPLTALQYLNLSRCNKLTDAGLEH 364
Query: 227 LPNISSLECLNLSFIQQVGAETDLVLS-LTALQNLNHLERLNLEQTQVSDATLFPLSTFK 285
L ++SL+ LNLS +++ TD L+ LT L L HL+ L++ +++D L L+
Sbjct: 365 LALLTSLQHLNLSSCKKL---TDAGLAHLTPLMALQHLD-LSI-CNKLTDRGLTHLNPLT 419
Query: 286 ELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDA-VLTNSGLGSFKPPRSLKLLDLHGG 343
L +L+L ++T+ L L L+ L L++ LT++GL P +L+ LDL
Sbjct: 420 ALQYLNLSQCDNITNAGLEHLIPLTALQYLNLSQCEKLTDAGLEHLTPLTALQQLDLSWC 479
Query: 344 WLLTE 348
+ LT+
Sbjct: 480 YKLTD 484
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 152/324 (46%), Gaps = 44/324 (13%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N +A+ L ++ + + +L L+ LN++ C+ +T + L LT +T L+ LDLS C
Sbjct: 220 NLKALHLEACQALTDDGLEHLTLLTALQHLNLSRCKNLTDAGLAHLTPLTGLQYLDLSHC 279
Query: 126 V-------------------------KVTDAGMKHLLSISTLEKLWLSET-GLTADGIAL 159
K+TDAG+ HL + L+ L LS+ LT G+
Sbjct: 280 NKFTDAGLAYLEILTALQHLDLRGCDKITDAGLSHLTPLVALQYLSLSQCWNLTDAGLIH 339
Query: 160 LSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFL 217
L L L L+L +TD L L +LT L++L+L ++++ G A L L L
Sbjct: 340 LKPLTALQYLNLSRCNKLTDAGLEHLALLTSLQHLNLSSCKKLTDAGLAHLTPLMALQHL 399
Query: 218 NLAWT------GVTKLPNISSLECLNLSFIQQV-GAETDLVLSLTALQNLNHLERLNLEQ 270
+L+ G+T L +++L+ LNLS + A + ++ LTALQ LNL Q
Sbjct: 400 DLSICNKLTDRGLTHLNPLTALQYLNLSQCDNITNAGLEHLIPLTALQ------YLNLSQ 453
Query: 271 TQ-VSDATLFPLSTFKELIHLSLR-NASLTDVSLHQLSSLSKLTNLSIRDA-VLTNSGLG 327
+ ++DA L L+ L L L LTD L+ L+ L L + LT++GL
Sbjct: 454 CEKLTDAGLEHLTPLTALQQLDLSWCYKLTDAGFAHLTPLTGLQYLDLSHCNKLTDAGLA 513
Query: 328 SFKPPRSLKLLDLHGGWLLTEDAI 351
P +L+ LDL LT+D +
Sbjct: 514 HLTPLTALQYLDLSNCIKLTDDGL 537
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 87/158 (55%), Gaps = 8/158 (5%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
EN DA + +L L+ LN+ C +T + L LT ++ L+ LDLS C K+TDAG+
Sbjct: 605 ENLTDA-GLVHLKLLTDLQYLNLRGCGYLTDAGLAHLTTLSGLQHLDLSSCEKLTDAGLV 663
Query: 135 HLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDL-GGLPVTDLVLRSLQVLTKLEY 192
HL ++ L+ L LS LT +G+ALL+ L L L L + +TD L L LT L+
Sbjct: 664 HLKLLTDLQYLNLSRCENLTDEGLALLTPLTALQHLKLRYCINLTDAGLAHLTPLTGLQR 723
Query: 193 LDL---WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKL 227
LDL W +++ G LK+ L LNL+ T ++ +
Sbjct: 724 LDLSQCWN--LTDAGLIHLKLLTALQHLNLSDTNISPM 759
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 73 RGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAG 132
R EN D E +A L L+ L + C +T + L LT +T L+ LDLS+C +TDAG
Sbjct: 678 RCENLTD-EGLALLTPLTALQHLKLRYCINLTDAGLAHLTPLTGLQRLDLSQCWNLTDAG 736
Query: 133 MKHLLSISTLEKLWLSETGLT 153
+ HL ++ L+ L LS+T ++
Sbjct: 737 LIHLKLLTALQHLNLSDTNIS 757
>gi|357458869|ref|XP_003599715.1| F-box/LRR-repeat protein [Medicago truncatula]
gi|355488763|gb|AES69966.1| F-box/LRR-repeat protein [Medicago truncatula]
Length = 585
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 120/231 (51%), Gaps = 14/231 (6%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N + +A++ L SLN+ C+ + L L G L L+LS +V + G+
Sbjct: 342 GFNDIGDRCLAHMKGLTKLESLNLDSCK-IGDEGLENLAGHKQLICLELSD-TEVGNHGL 399
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
+HL +S+LEK+ LS T ++ G+ L L +L L+L +TD L +L LT L L
Sbjct: 400 EHLSGLSSLEKINLSFTVVSDSGLRKLCGLSSLKSLNLDAYQITDAGLATLTSLTGLTDL 459
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFL-----NLAWTGVTKLPNISSLECLNLSFIQQVGAET 248
DL+G+++++ G LK F L L L GV + +SSL CLNLS + +T
Sbjct: 460 DLFGARITDVGTNYLKKFKNLRSLEICSGGLTDAGVKNIKELSSLMCLNLSQNSNLTDKT 519
Query: 249 -DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLT 298
+L+ LTAL + LNL T+++ A L L T K L L+L + +T
Sbjct: 520 VELIAGLTALVS------LNLSNTRITSAGLQHLKTLKNLRSLTLESCKVT 564
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 143/311 (45%), Gaps = 32/311 (10%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N ++ R +S+ A+ M+ L L++ C + + L G+T L+ L++ C
Sbjct: 181 NLTSLSFRRNDSISAQGMSAFSRLVNLVKLDLERCPGIHGGTVH-LQGLTKLESLNMKWC 239
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+TD+ +K L +++L L +S + +T GI+ L LQ L++L+L G VT L SL
Sbjct: 240 NCITDSDIKPLSELASLTSLEISCSKVTDFGISFLRGLQKLALLNLEGCLVTSACLDSLS 299
Query: 186 --------VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV-----TKLPNISS 232
L L L+L +S+RG +L LNL + + + ++
Sbjct: 300 GCHEHTIPKLPALSNLNLNRCNISDRGCERFSRLEKLKVLNLGFNDIGDRCLAHMKGLTK 359
Query: 233 LECLNLS-------FIQQVGAETDLVL-----------SLTALQNLNHLERLNLEQTQVS 274
LE LNL ++ + L+ L L L+ LE++NL T VS
Sbjct: 360 LESLNLDSCKIGDEGLENLAGHKQLICLELSDTEVGNHGLEHLSGLSSLEKINLSFTVVS 419
Query: 275 DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRS 334
D+ L L L L+L +TD L L+SL+ LT+L + A +T+ G K ++
Sbjct: 420 DSGLRKLCGLSSLKSLNLDAYQITDAGLATLTSLTGLTDLDLFGARITDVGTNYLKKFKN 479
Query: 335 LKLLDLHGGWL 345
L+ L++ G L
Sbjct: 480 LRSLEICSGGL 490
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 141/297 (47%), Gaps = 21/297 (7%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
E++ ++ N + + L L SL ++ C +VT + L G+ L L+L C+
Sbjct: 232 ESLNMKWCNCITDSDIKPLSELASLTSLEIS-CSKVTDFGISFLRGLQKLALLNLEGCL- 289
Query: 128 VTDAGMKHLLS--------ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDL 179
VT A + L + L L L+ ++ G S L+ L VL+LG + D
Sbjct: 290 VTSACLDSLSGCHEHTIPKLPALSNLNLNRCNISDRGCERFSRLEKLKVLNLGFNDIGDR 349
Query: 180 VLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLE 234
L ++ LTKLE L+L ++ + G L +L L L+ T G+ L +SSLE
Sbjct: 350 CLAHMKGLTKLESLNLDSCKIGDEGLENLAGHKQLICLELSDTEVGNHGLEHLSGLSSLE 409
Query: 235 CLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 294
+NLSF V +++ L L L+ L+ LNL+ Q++DA L L++ L L L
Sbjct: 410 KINLSFT--VVSDS----GLRKLCGLSSLKSLNLDAYQITDAGLATLTSLTGLTDLDLFG 463
Query: 295 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 351
A +TDV + L L +L I LT++G+ + K SL L+L LT+ +
Sbjct: 464 ARITDVGTNYLKKFKNLRSLEICSGGLTDAGVKNIKELSSLMCLNLSQNSNLTDKTV 520
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 151/311 (48%), Gaps = 41/311 (13%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTG--------MTCLKELDLSRCVKVTDAGMK 134
+++L + L LN+ C VTS+ L +L+G + L L+L+RC ++D G +
Sbjct: 271 ISFLRGLQKLALLNLEGCL-VTSACLDSLSGCHEHTIPKLPALSNLNLNRC-NISDRGCE 328
Query: 135 HLLSISTLEKLWLSETGLTADG---IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLE 191
S LEKL + G G +A + L L L+L + D L +L +L
Sbjct: 329 RF---SRLEKLKVLNLGFNDIGDRCLAHMKGLTKLESLNLDSCKIGDEGLENLAGHKQLI 385
Query: 192 YLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSFIQQVGA 246
L+L ++V N G L L +NL++T G+ KL +SSL+ LNL Q A
Sbjct: 386 CLELSDTEVGNHGLEHLSGLSSLEKINLSFTVVSDSGLRKLCGLSSLKSLNLDAYQITDA 445
Query: 247 ETDLVLSLTALQNL------------NHLERL-NLEQTQV-----SDATLFPLSTFKELI 288
+ SLT L +L N+L++ NL ++ +DA + + L+
Sbjct: 446 GLATLTSLTGLTDLDLFGARITDVGTNYLKKFKNLRSLEICSGGLTDAGVKNIKELSSLM 505
Query: 289 HLSL-RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLT 347
L+L +N++LTD ++ ++ L+ L +L++ + +T++GL K ++L+ L L +T
Sbjct: 506 CLNLSQNSNLTDKTVELIAGLTALVSLNLSNTRITSAGLQHLKTLKNLRSLTLE-SCKVT 564
Query: 348 EDAILQFCKMH 358
+ I +F +H
Sbjct: 565 ANDIKKFKLIH 575
>gi|255088361|ref|XP_002506103.1| predicted protein [Micromonas sp. RCC299]
gi|226521374|gb|ACO67361.1| predicted protein [Micromonas sp. RCC299]
Length = 610
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 135/282 (47%), Gaps = 28/282 (9%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
VD + +A +G+ L +LN+A CR +T A + L G+T LKEL L C +V D G++ L
Sbjct: 292 VDDQGVATIGSLSALETLNLAGCR-ITDGACFLLGGLTALKELSLEWC-RVGDGGVRRLA 349
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
S++ LE L L + +T +G+ L+ L L +DL V D ++L LE ++L
Sbjct: 350 SLAKLEVLNLGYSSVTDEGVQHLAPLVKLREIDLDSCQVGDDACKALAEWPNLEDVNLSD 409
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTAL 257
+ V N G + RL +NL+++ V+ D V+ L
Sbjct: 410 TAVGNLGLKRISKLTRLRRVNLSYSNVSD----------------------DGVMYL--- 444
Query: 258 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 317
+N + L+L+ V+D L L+ K++ L L A +TD L + +L L +
Sbjct: 445 ENAASIRSLSLDTRMVTDEGLGYLAKLKDIEELDLFGARITDEGAKHLRHMPRLKTLELC 504
Query: 318 DAVLTNSGLGSFKPP-RSLKLLDLHGGWLLTEDAILQFCKMH 358
+T++G+ R L LL+L + +++ A+ ++H
Sbjct: 505 GGGITDAGVKHIGDACRELTLLNLGQNFRISDAAVPFLLQLH 546
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 140/295 (47%), Gaps = 14/295 (4%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G + + + Y+ LR +N+ C +T+ ++ L+G+T L+ LD C V +
Sbjct: 215 GCDGITGAGLRYVSGATKLRCVNLERCNGLTNGLVY-LSGLTELERLDAGWCNHVDSNDV 273
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
L S+ L+ L L+ T + G+A + SL L L+L G +TD L LT L+ L
Sbjct: 274 TSLRSLKKLKHLNLARTKVDDQGVATIGSLSALETLNLAGCRITDGACFLLGGLTALKEL 333
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSFIQQVGAET 248
L +V + G L +L LNL ++ GV L + L ++L QVG +
Sbjct: 334 SLEWCRVGDGGVRRLASLAKLEVLNLGYSSVTDEGVQHLAPLVKLREIDLDSC-QVGDD- 391
Query: 249 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 308
+ AL +LE +NL T V + L +S L ++L ++++D + L +
Sbjct: 392 ----ACKALAEWPNLEDVNLSDTAVGNLGLKRISKLTRLRRVNLSYSNVSDDGVMYLENA 447
Query: 309 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEV 363
+ + +LS+ ++T+ GLG + ++ LDL G + E A + + PR++
Sbjct: 448 ASIRSLSLDTRMVTDEGLGYLAKLKDIEELDLFGARITDEGA--KHLRHMPRLKT 500
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 120/245 (48%), Gaps = 27/245 (11%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G +SV E + +L LR +++ C+ V A AL L++++LS V + G+
Sbjct: 360 GYSSVTDEGVQHLAPLVKLREIDLDSCQ-VGDDACKALAEWPNLEDVNLSD-TAVGNLGL 417
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
K + ++ L ++ LS + ++ DG+ L + ++ L L VTD L L L +E L
Sbjct: 418 KRISKLTRLRRVNLSYSNVSDDGVMYLENAASIRSLSLDTRMVTDEGLGYLAKLKDIEEL 477
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLS 253
DL+G+++++ GA L+ PRL L L G+T + ++ +G
Sbjct: 478 DLFGARITDEGAKHLRHMPRLKTLELCGGGITD------------AGVKHIG-------- 517
Query: 254 LTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 312
L LNL Q ++SDA + L +L L+L+ + +++ + QLS LS LT
Sbjct: 518 ----DACRELTLLNLGQNFRISDAAVPFLLQLHKLGSLNLQYSRISNEGVTQLSQLSNLT 573
Query: 313 NLSIR 317
L+++
Sbjct: 574 TLALK 578
>gi|46446912|ref|YP_008277.1| hypothetical protein pc1278 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400553|emb|CAF24002.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 731
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 104/335 (31%), Positives = 156/335 (46%), Gaps = 45/335 (13%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+A+L LR LN+ C ++T++ L L + L+ LDLS C +TDAG+ HL + L
Sbjct: 390 LAHLTPLVALRHLNLMGCNKLTNAGLMHLRPLMALQHLDLSCCRNLTDAGLAHLAPLVAL 449
Query: 143 EKLWLSE-TGLTADGIALLSSLQNLSVLDLGG-LPVTDLVLRSLQVLTKLEYLDL-WGSQ 199
+ L LSE T LT G+A L L NL L+L +TD L L L L++LDL
Sbjct: 450 QHLCLSECTNLTGAGLAHLKPLVNLQHLNLNSCYKLTDAGLAHLTPLMALQHLDLSCCRN 509
Query: 200 VSNRGAAVLKMFPRLSFL------NLAWTGVTKLPNISSLECLNLSFIQQV-GAETDLVL 252
+++ G A L+ L L N G+T L + +L+ LNLS + + A ++
Sbjct: 510 LTDAGLAHLRPLVALQHLDLNCCKNFTDAGLTHLTPLVALQHLNLSCCRNLTDAGLAYLM 569
Query: 253 SLTALQNLN-------------------HLERLNL-EQTQVSDATLFPLSTFKELIHLSL 292
L AL +LN L+ LNL + ++++A L L+ L HL L
Sbjct: 570 PLVALSHLNLAGCHNFTDAGLAHLAPLVALQHLNLGDCYRLTNAGLEHLTPLVALQHLDL 629
Query: 293 RNA-SLTDVSLHQLSSLSKLTNLSIRDA-VLTNSGLGSFKPPRSLKLLDLHGGWLLT--- 347
LTD L L L LT+L + + LT++GL P +L+ L+L+ LT
Sbjct: 630 SECEKLTDAGLTHLVPLVALTHLDLSECDKLTDAGLAHLTPLEALQHLNLNWCDKLTDAG 689
Query: 348 ----------EDAILQFCKMHPRIEVWHELSVICP 372
+D L +CK + + H S + P
Sbjct: 690 LAHLTPLLALQDLYLGYCKNFTEVGLAHFKSSVAP 724
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 147/320 (45%), Gaps = 38/320 (11%)
Query: 56 FPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMT 115
F +L+ F + E + S+ + L + L++L++ +C ++T + L L +
Sbjct: 313 FEKILKHFSNEIERLNFSKNASLTDAHLLALKNCKNLKALHLQECYKLTDTGLVYLAPLV 372
Query: 116 CLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLGGL 174
L+ L+L C+K+TDAG+ HL + L L L LT G+ L L L LDL
Sbjct: 373 SLQYLNLFDCIKLTDAGLAHLTPLVALRHLNLMGCNKLTNAGLMHLRPLMALQHLDLSCC 432
Query: 175 -PVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLN------LAWTGVTK 226
+TD L L L L++L L + ++ G A LK L LN L G+
Sbjct: 433 RNLTDAGLAHLAPLVALQHLCLSECTNLTGAGLAHLKPLVNLQHLNLNSCYKLTDAGLAH 492
Query: 227 LPNISSLECLNLSFIQQVGAETDLVLS----LTALQNLN-------------------HL 263
L + +L+ L+LS + + TD L+ L ALQ+L+ L
Sbjct: 493 LTPLMALQHLDLSCCRNL---TDAGLAHLRPLVALQHLDLNCCKNFTDAGLTHLTPLVAL 549
Query: 264 ERLNLEQTQ-VSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV- 320
+ LNL + ++DA L L L HL+L + TD L L+ L L +L++ D
Sbjct: 550 QHLNLSCCRNLTDAGLAYLMPLVALSHLNLAGCHNFTDAGLAHLAPLVALQHLNLGDCYR 609
Query: 321 LTNSGLGSFKPPRSLKLLDL 340
LTN+GL P +L+ LDL
Sbjct: 610 LTNAGLEHLTPLVALQHLDL 629
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 85/174 (48%), Gaps = 8/174 (4%)
Query: 40 HLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVAD 99
HL S R+L L + L H + L G ++ +A+L L+ LN+ D
Sbjct: 551 HLNLSCCRNLTDAGLAYLMPLVALSH----LNLAGCHNFTDAGLAHLAPLVALQHLNLGD 606
Query: 100 CRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG-LTADGIA 158
C R+T++ L LT + L+ LDLS C K+TDAG+ HL+ + L L LSE LT G+A
Sbjct: 607 CYRLTNAGLEHLTPLVALQHLDLSECEKLTDAGLTHLVPLVALTHLDLSECDKLTDAGLA 666
Query: 159 LLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF 211
L+ L+ L L+L +TD L L L L+ DL+ N L F
Sbjct: 667 HLTPLEALQHLNLNWCDKLTDAGLAHLTPLLALQ--DLYLGYCKNFTEVGLAHF 718
>gi|46447548|ref|YP_008913.1| hypothetical protein pc1914 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401189|emb|CAF24638.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 528
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 101/286 (35%), Positives = 146/286 (51%), Gaps = 31/286 (10%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
EN DA +AYL L+ LN++ C +T + L LT + L+ LDLS C +TDAG+
Sbjct: 255 ENLTDA-GLAYLKPLTALQHLNLSGCWNLTDAGLVHLTPLVGLQHLDLSYCENLTDAGLA 313
Query: 135 HLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG-GLPVTDLVLRSLQVLTKLEY 192
HL ++ L+ L LS LT G+A L+ L L LDL +TD L L LT L++
Sbjct: 314 HLTPLTALQHLGLSCCENLTDAGLAHLALLTTLQHLDLSCCYNLTDASLSHLTPLTALQH 373
Query: 193 LDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVL 252
L L G + NL G+ L +++L+ L+LS + TD L
Sbjct: 374 LYLIGCE------------------NLTDAGLAHLTPLTALQHLDLSCCFNL---TDAGL 412
Query: 253 S-LTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLS 309
S LT L L H LNL + +++DA L L+T L HL+L LTD L L+ L+
Sbjct: 413 SHLTPLTGLQH---LNLSRCYKLTDAGLAHLTTLVALQHLNLSECRHLTDAGLAHLTPLT 469
Query: 310 KLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQF 354
L +L ++ + LT++GL P +L+ LDL LT+D + +F
Sbjct: 470 ALQHLDLKYCINLTDAGLAHLTPLTALQHLDLSRCRRLTDDGLDRF 515
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIST 141
+A+L L+ L++ C +T + L LT +T L+ LDLSRC ++TD G+ +++T
Sbjct: 462 LAHLTPLTALQHLDLKYCINLTDAGLAHLTPLTALQHLDLSRCRRLTDDGLDRFKTLAT 520
>gi|326497793|dbj|BAJ98524.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 583
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 159/337 (47%), Gaps = 34/337 (10%)
Query: 33 SLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYL 92
S++ L + D + H I +L F N ++ + + V AE M+ L
Sbjct: 162 SMQSLSCNYCDRVSEHGI-------GVLSGFS-NLTSLSFKRSDGVTAEGMSVFADLVNL 213
Query: 93 RSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGL 152
+L++ C ++ L + G+ L+ L++ C +TD+ +K+L ++ L++L LS +
Sbjct: 214 VNLDLECCLKI-HGGLVHMKGLRKLESLNMRYCNYITDSDIKYLSDLTNLKELQLSSCRI 272
Query: 153 TADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFP 212
T G++ L+ L L+ L+L PVT L ++ L L L+L + + G +
Sbjct: 273 TDLGVSYLTGLSKLTHLNLESCPVTAACLEAISGLASLMLLNLNRCGIYDEGCESFEDLK 332
Query: 213 RLSFLNLAWTGVTK-----LPNISSLECLNLSFIQQVGAE----------------TDLV 251
+L LNL + +T L + +LE LNL ++G E +D
Sbjct: 333 KLKVLNLGFNHITDACLVHLKGLINLESLNLDSC-KIGDEGLLHLKGLVLLKSLELSDTA 391
Query: 252 LSLTALQNLN---HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 308
+ LQ+L+ +L +NL T V+D + +ST L ++L N +TDV L L L
Sbjct: 392 IGSNGLQHLSGLRNLHSINLSFTLVTDTGMKKISTLNSLKSVNLDNRLITDVGLAALIGL 451
Query: 309 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 345
+ LT+L + A +T+ G + ++L+ L++ GG +
Sbjct: 452 TGLTHLDLFGARVTDHGTSFLRYFKNLESLEVCGGSI 488
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 132/300 (44%), Gaps = 40/300 (13%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+ ++ R L SLN+ C +T S + L+ +T LKEL LS C ++TD G+ +L +S L
Sbjct: 228 LVHMKGLRKLESLNMRYCNYITDSDIKYLSDLTNLKELQLSSC-RITDLGVSYLTGLSKL 286
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
L L +TA + +S L +L +L+L + D S + L KL+ L+L + +++
Sbjct: 287 THLNLESCPVTAACLEAISGLASLMLLNLNRCGIYDEGCESFEDLKKLKVLNLGFNHITD 346
Query: 203 RGAAVLKMFPRLSFLNL-----------------------------AWTGVTKLPNISSL 233
LK L LNL G+ L + +L
Sbjct: 347 ACLVHLKGLINLESLNLDSCKIGDEGLLHLKGLVLLKSLELSDTAIGSNGLQHLSGLRNL 406
Query: 234 ECLNLSF--IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 291
+NLSF + G + + LN L+ +NL+ ++D L L L HL
Sbjct: 407 HSINLSFTLVTDTG--------MKKISTLNSLKSVNLDNRLITDVGLAALIGLTGLTHLD 458
Query: 292 LRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 351
L A +TD L L +L + +T++G+ + K ++L LL+L LT+ +
Sbjct: 459 LFGARVTDHGTSFLRYFKNLESLEVCGGSITDAGVKNIKDLKALTLLNLSQNAKLTDKTL 518
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 114/227 (50%), Gaps = 6/227 (2%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N + + +L L SLN+ C+ + L L G+ LK L+LS + G+
Sbjct: 340 GFNHITDACLVHLKGLINLESLNLDSCK-IGDEGLLHLKGLVLLKSLELSD-TAIGSNGL 397
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
+HL + L + LS T +T G+ +S+L +L ++L +TD+ L +L LT L +L
Sbjct: 398 QHLSGLRNLHSINLSFTLVTDTGMKKISTLNSLKSVNLDNRLITDVGLAALIGLTGLTHL 457
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK--LPNISSLECLNLSFIQQVGAETDLV 251
DL+G++V++ G + L+ F L L + +T + NI L+ L L + Q TD
Sbjct: 458 DLFGARVTDHGTSFLRYFKNLESLEVCGGSITDAGVKNIKDLKALTLLNLSQNAKLTDKT 517
Query: 252 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLT 298
L L + L L LN+ ++VS+A L + L L+L + +T
Sbjct: 518 LEL--ISGLTALVSLNVSNSRVSNAGFRHLKALQNLRSLTLDSCRVT 562
>gi|46447569|ref|YP_008934.1| hypothetical protein pc1935 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401210|emb|CAF24659.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 504
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 157/331 (47%), Gaps = 28/331 (8%)
Query: 30 QRRSLERLPAHLADSLLRHLIRRR---LIFPSLLEVFKHNAEAIELRGENSVDAEWMAYL 86
R L RL +L +++ L+ + F ++ F EA+ + + + L
Sbjct: 187 HRYQLNRLKNYLEFTVVSALLNQTSQLAEFERIINRFSKKIEALNFSNQAYLTDVHLLAL 246
Query: 87 GAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLW 146
+ L++L C +T++ L L + L+ LDL+ C +TDAG+ HL + L+ L
Sbjct: 247 KDCKNLKALYFRKCPNLTAAGLAYLRPLVALQHLDLNYCYNLTDAGLAHLAPLVALKHLN 306
Query: 147 LSETG-LTADGIALLS---SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
LS G LT G+A LS +LQ+L++ + +TD L L+ L L+YL+L S+ S
Sbjct: 307 LSGHGYLTDAGLAHLSPLTALQHLNLSECCNYKLTDAGLAHLRPLVALKYLNL--SRCSK 364
Query: 203 RGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNH 262
A G+ L +++L+ LNLS +GA L L+ L
Sbjct: 365 FTGA----------------GLAHLRPLTALQHLNLSGCGGIGAGLASA-GLAHLRPLTA 407
Query: 263 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDA-V 320
L+ LNL V+D L L+ + L +L L N LTD L L+ L L +L++
Sbjct: 408 LQHLNLSWCGVTDDELAHLTPLEALQYLDLSNCWHLTDAGLAHLNPLIALQHLNLSKCDQ 467
Query: 321 LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 351
LTN+GL P +L+ L+L G LT+D +
Sbjct: 468 LTNAGLAHLIPLTALQHLNLSGCSNLTDDGL 498
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 124/290 (42%), Gaps = 48/290 (16%)
Query: 80 AEWMAYLGAF-RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLS 138
AE+ + F + + +LN ++ +T L AL LK L +C +T AG+ +L
Sbjct: 214 AEFERIINRFSKKIEALNFSNQAYLTDVHLLALKDCKNLKALYFRKCPNLTAAGLAYLRP 273
Query: 139 ISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLW 196
+ L+ L L+ LT G+A L+ L L L+L G +TD L L LT L++L+L
Sbjct: 274 LVALQHLDLNYCYNLTDAGLAHLAPLVALKHLNLSGHGYLTDAGLAHLSPLTALQHLNL- 332
Query: 197 GSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQ-VGAETDLVLSLT 255
S+ N L G+ L + +L+ LNLS + GA + LT
Sbjct: 333 -SECCNY--------------KLTDAGLAHLRPLVALKYLNLSRCSKFTGAGLAHLRPLT 377
Query: 256 ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLS 315
ALQ+LN LS + A L L L L+ L +L+
Sbjct: 378 ALQHLN-------------------LSGCGGI------GAGLASAGLAHLRPLTALQHLN 412
Query: 316 IRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWH 365
+ +T+ L P +L+ LDL W LT+ + ++P I + H
Sbjct: 413 LSWCGVTDDELAHLTPLEALQYLDLSNCWHLTDAGL---AHLNPLIALQH 459
>gi|226505324|ref|NP_001147302.1| regulatory subunit [Zea mays]
gi|195609698|gb|ACG26679.1| regulatory subunit [Zea mays]
gi|413937767|gb|AFW72318.1| regulatory subunit isoform 1 [Zea mays]
gi|413937768|gb|AFW72319.1| regulatory subunit isoform 2 [Zea mays]
Length = 582
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 135/297 (45%), Gaps = 40/297 (13%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+ +L L SLN+ C + S + LT +T LK+L LS C K+TD G+ ++ + L
Sbjct: 227 LIHLKDLTKLESLNMRYCNYIADSDIKYLTDLTNLKDLQLS-CCKITDLGVSYIRGLQKL 285
Query: 143 EKLWLSETGLTA------------------------DGIALLSSLQNLSVLDLGGLPVTD 178
L L +TA DG L+ L VL+LG +TD
Sbjct: 286 THLNLEGCPVTAACLEAISGLSSLVLLNLNRCGIYDDGCENFEGLKRLKVLNLGFNYITD 345
Query: 179 LVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSL 233
L L+ L LE L+L ++ + G + LK L L L+ T G+ L + +L
Sbjct: 346 ACLVHLKELISLESLNLDSCKIGDDGLSHLKGLVLLQSLELSDTEVGNNGLQHLSGLRNL 405
Query: 234 ECLNLSF--IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 291
+ +NLSF + +G + + LN L+ +NL+ Q++D L L + L HL
Sbjct: 406 QSINLSFTLVTDIGVK--------KISVLNSLKSVNLDNRQITDVGLAALISLTRLTHLD 457
Query: 292 LRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 348
L A +TD + L +L + +T++G+ + K ++L LL+L LT+
Sbjct: 458 LFGACITDNGTNCFRYFKNLVSLEVCGGFVTDAGVKNIKDLKALTLLNLSQNANLTD 514
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 145/294 (49%), Gaps = 26/294 (8%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N+V AE M L +L++ C ++ L L +T L+ L++ C + D+ +K+
Sbjct: 196 NAVTAEGMRAFANLVNLLNLDLEGCLKI-HGGLIHLKDLTKLESLNMRYCNYIADSDIKY 254
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
L ++ L+ L LS +T G++ + LQ L+ L+L G PVT L ++ L+ L L+L
Sbjct: 255 LTDLTNLKDLQLSCCKITDLGVSYIRGLQKLTHLNLEGCPVTAACLEAISGLSSLVLLNL 314
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSFIQQVGAE--- 247
+ + G + RL LNL + +T L + SLE LNL ++G +
Sbjct: 315 NRCGIYDDGCENFEGLKRLKVLNLGFNYITDACLVHLKELISLESLNLDSC-KIGDDGLS 373
Query: 248 --TDLVL--------------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 291
LVL L L L +L+ +NL T V+D + +S L ++
Sbjct: 374 HLKGLVLLQSLELSDTEVGNNGLQHLSGLRNLQSINLSFTLVTDIGVKKISVLNSLKSVN 433
Query: 292 LRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 345
L N +TDV L L SL++LT+L + A +T++G F+ ++L L++ GG++
Sbjct: 434 LDNRQITDVGLAALISLTRLTHLDLFGACITDNGTNCFRYFKNLVSLEVCGGFV 487
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 118/234 (50%), Gaps = 6/234 (2%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N + + +L L SLN+ C+ + L L G+ L+ L+LS +V + G+
Sbjct: 339 GFNYITDACLVHLKELISLESLNLDSCK-IGDDGLSHLKGLVLLQSLELSD-TEVGNNGL 396
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
+HL + L+ + LS T +T G+ +S L +L ++L +TD+ L +L LT+L +L
Sbjct: 397 QHLSGLRNLQSINLSFTLVTDIGVKKISVLNSLKSVNLDNRQITDVGLAALISLTRLTHL 456
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK--LPNISSLECLNLSFIQQVGAETDLV 251
DL+G+ +++ G + F L L + VT + NI L+ L L + Q TD
Sbjct: 457 DLFGACITDNGTNCFRYFKNLVSLEVCGGFVTDAGVKNIKDLKALTLLNLSQNANLTDKT 516
Query: 252 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 305
L L + L L LN+ ++VS+A L L+ L LSL + +T + +L
Sbjct: 517 LEL--ISGLTALINLNVSNSRVSNAGLKHLNDLHNLRSLSLDSTRVTANEMRKL 568
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 122/244 (50%), Gaps = 20/244 (8%)
Query: 88 AFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWL 147
+ L+ LN+ +T + L L + L+ L+L C K+ D G+ HL + L+ L L
Sbjct: 329 GLKRLKVLNLG-FNYITDACLVHLKELISLESLNLDSC-KIGDDGLSHLKGLVLLQSLEL 386
Query: 148 SETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAV 207
S+T + +G+ LS L+NL ++L VTD+ ++ + VL L+ ++L Q+++ G A
Sbjct: 387 SDTEVGNNGLQHLSGLRNLQSINLSFTLVTDIGVKKISVLNSLKSVNLDNRQITDVGLAA 446
Query: 208 LKMFPRLSFLNLAWTGVTK--------LPNISSLECLNLSFIQQVGAETDLVLSLTALQN 259
L RL+ L+L +T N+ SLE F+ G + +++
Sbjct: 447 LISLTRLTHLDLFGACITDNGTNCFRYFKNLVSLEVCG-GFVTDAGVKN--------IKD 497
Query: 260 LNHLERLNLEQT-QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 318
L L LNL Q ++D TL +S LI+L++ N+ +++ L L+ L L +LS+
Sbjct: 498 LKALTLLNLSQNANLTDKTLELISGLTALINLNVSNSRVSNAGLKHLNDLHNLRSLSLDS 557
Query: 319 AVLT 322
+T
Sbjct: 558 TRVT 561
>gi|46446659|ref|YP_008024.1| hypothetical protein pc1025 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400300|emb|CAF23749.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 695
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 152/298 (51%), Gaps = 16/298 (5%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ + L N + +A+L L+ L+++ C +T L L +T L+ LDL C K
Sbjct: 303 QKLNLGRYNQLTDAGLAHLKPLTALQRLDLSFCEDLTDDGLAHLRPLTALQRLDLRYCEK 362
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDL-GGLPVTDLVLRSLQV 186
+TD G+ HL ++ L++L LS T G++ LS L L L+L + +TD L L++
Sbjct: 363 LTDDGLVHLRPLTALQRLNLSNCWHTGAGLSHLSPLTGLQHLNLYECINLTDAGLVHLKL 422
Query: 187 LTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLS 239
LT L++L+L + ++++ G LK+ L LNL+ G+ L ++ L+ LNLS
Sbjct: 423 LTGLQHLNLSYCDELTDAGLVHLKLLTGLQHLNLSNCNNLTDAGLVHLKFLTGLQHLNLS 482
Query: 240 FIQQVGAETDLVLSLTALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNAS-L 297
+ ++ TD L L+ L L+ LNL ++DA L L+ L HL L S L
Sbjct: 483 YCDEL---TD--AGLVHLKLLTGLQHLNLSNCNNLTDAGLAHLTPLTGLQHLDLSYCSKL 537
Query: 298 TDVSLHQLSSLSKLTNLSIRDA-VLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQF 354
TD L L L+ L L++ + LT++GL K L+ L+L LT+D ++
Sbjct: 538 TDDGLAHLKPLTALQCLNLSNCRNLTDAGLVHLKLLTGLQHLNLSDYKNLTDDGLIHL 595
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 109/363 (30%), Positives = 167/363 (46%), Gaps = 48/363 (13%)
Query: 30 QRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMA----- 84
R L RL +L +++ L+ + + H ++ IE G N + ++
Sbjct: 187 HRYQLNRLKNYLEFTVVSALLNQTSQLAEFERIINHFSKKIE--GLNFSNNRYLTDAHLL 244
Query: 85 YLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEK 144
L + L+ L++ CR +T L LT +T L+ L+LS +TDAG+ HL ++ L+K
Sbjct: 245 ILKNCKNLKVLHLEKCRALTDDGLAHLTPLTALQYLNLSASYNLTDAGLVHLAPLTALQK 304
Query: 145 LWLSETG-LTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDL-WGSQVS 201
L L LT G+A L L L LDL +TD L L+ LT L+ LDL + +++
Sbjct: 305 LNLGRYNQLTDAGLAHLKPLTALQRLDLSFCEDLTDDGLAHLRPLTALQRLDLRYCEKLT 364
Query: 202 NRGAAVLKMFPRLSFLNLA--W-TG--------VTKLPNISSLECLNLSFIQQVGAETDL 250
+ G L+ L LNL+ W TG +T L +++ EC+NL+ V +
Sbjct: 365 DDGLVHLRPLTALQRLNLSNCWHTGAGLSHLSPLTGLQHLNLYECINLTDAGLVHLKL-- 422
Query: 251 VLSLTALQNLN-------------------HLERLNLEQ-TQVSDATLFPLSTFKELIHL 290
LT LQ+LN L+ LNL ++DA L L L HL
Sbjct: 423 ---LTGLQHLNLSYCDELTDAGLVHLKLLTGLQHLNLSNCNNLTDAGLVHLKFLTGLQHL 479
Query: 291 SLRNAS-LTDVSLHQLSSLSKLTNLSIRDA-VLTNSGLGSFKPPRSLKLLDLHGGWLLTE 348
+L LTD L L L+ L +L++ + LT++GL P L+ LDL LT+
Sbjct: 480 NLSYCDELTDAGLVHLKLLTGLQHLNLSNCNNLTDAGLAHLTPLTGLQHLDLSYCSKLTD 539
Query: 349 DAI 351
D +
Sbjct: 540 DGL 542
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 71/132 (53%), Gaps = 3/132 (2%)
Query: 81 EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
+ +A+L L+ LN+++CR +T + L L +T L+ L+LS +TD G+ HL+ +
Sbjct: 540 DGLAHLKPLTALQCLNLSNCRNLTDAGLVHLKLLTGLQHLNLSDYKNLTDDGLIHLMPLM 599
Query: 141 TLEKL-WLSETGLTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDLWGS 198
L L L LT G+ L+ L L L+L +TD L L LT L++L+L G
Sbjct: 600 ALRHLELLGCENLTDAGLVHLTPLTALQHLNLSHCDDLTDAGLAHLTSLTGLQHLELLGC 659
Query: 199 Q-VSNRGAAVLK 209
+ +++ G A K
Sbjct: 660 ENLTDAGLARFK 671
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 5/120 (4%)
Query: 47 RHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSS 106
R+L L+ LL +H + L ++ + + +L LR L + C +T +
Sbjct: 560 RNLTDAGLVHLKLLTGLQH----LNLSDYKNLTDDGLIHLMPLMALRHLELLGCENLTDA 615
Query: 107 ALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL-WLSETGLTADGIALLSSLQN 165
L LT +T L+ L+LS C +TDAG+ HL S++ L+ L L LT G+A ++ N
Sbjct: 616 GLVHLTPLTALQHLNLSHCDDLTDAGLAHLTSLTGLQHLELLGCENLTDAGLARFKTVAN 675
>gi|225463572|ref|XP_002270172.1| PREDICTED: F-box/LRR-repeat protein 14 [Vitis vinifera]
gi|297743556|emb|CBI36423.3| unnamed protein product [Vitis vinifera]
Length = 578
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 142/298 (47%), Gaps = 36/298 (12%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+ +L L SLN+ C +T + L L+G+T LK L++SR KVTD G+ +L + L
Sbjct: 223 LIHLKGLTKLESLNINMCHCITDADLKPLSGLTNLKGLEISR-SKVTDDGVAYLKGLHKL 281
Query: 143 EKLWLSETGLTA------------------------DGIALLSSLQNLSVLDLGGLPVTD 178
L + +TA DG + +NL VL+LG +TD
Sbjct: 282 ALLNMEGCPVTAACLESLSDLPSLLSLNLNRSMLSDDGCENFARQENLRVLNLGFNDLTD 341
Query: 179 LVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSL 233
L L+ LT LE L+L ++ + G A L L L L+ T G+ L +++L
Sbjct: 342 ACLVHLKGLTNLESLNLDSCRICDEGLANLTGLRHLKCLELSDTEVGSNGLRHLSGLANL 401
Query: 234 ECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 293
E +NLSF A TD L L L+ L+ LNL+ Q++DA L L++ L HL L
Sbjct: 402 ESINLSFT----AVTDS--GLRKLSALSSLKSLNLDARQITDAGLAALTSLTGLTHLDLF 455
Query: 294 NASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 351
A +TD L + L +L I LT++G+ + K L +L+L LT+ ++
Sbjct: 456 GARITDSGTSYLRNFKNLQSLEICGGGLTDAGVKNIKDLTCLTVLNLSQNCNLTDKSL 513
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 123/236 (52%), Gaps = 6/236 (2%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N + + +L L SLN+ CR + L LTG+ LK L+LS +V G+
Sbjct: 335 GFNDLTDACLVHLKGLTNLESLNLDSCR-ICDEGLANLTGLRHLKCLELSD-TEVGSNGL 392
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
+HL ++ LE + LS T +T G+ LS+L +L L+L +TD L +L LT L +L
Sbjct: 393 RHLSGLANLESINLSFTAVTDSGLRKLSALSSLKSLNLDARQITDAGLAALTSLTGLTHL 452
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK--LPNISSLECLNLSFIQQVGAETDLV 251
DL+G+++++ G + L+ F L L + G+T + NI L CL + + Q TD
Sbjct: 453 DLFGARITDSGTSYLRNFKNLQSLEICGGGLTDAGVKNIKDLTCLTVLNLSQNCNLTDKS 512
Query: 252 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 307
L L + L L L++ +++++A L L K L L+L + +T + +L S
Sbjct: 513 LEL--ISGLTALVSLSVSNSRITNAGLQHLKQLKNLKSLTLDSCKVTVNDIKKLQS 566
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 12/157 (7%)
Query: 193 LDLWGSQVSNRGAAVLKMFPRLSFLNLAWT------GVTKLPNISSLECLNLSFIQQVGA 246
+DL GS+++N G LK L LNL + G+ + +S+L L+ + A
Sbjct: 137 VDLSGSEITNSGLIHLKDCTNLQALNLNYCDQISDHGLKHISGLSNLTTLSFRRNNAITA 196
Query: 247 ETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQL 305
+ ++A +L +L +L+LE+ L L +L L++ +TD L L
Sbjct: 197 Q-----GMSAFSSLVNLVKLDLERCPGIHGGLIHLKGLTKLESLNINMCHCITDADLKPL 251
Query: 306 SSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 342
S L+ L L I + +T+ G+ K L LL++ G
Sbjct: 252 SGLTNLKGLEISRSKVTDDGVAYLKGLHKLALLNMEG 288
>gi|406835528|ref|ZP_11095122.1| hypothetical protein SpalD1_27934 [Schlesneria paludicola DSM
18645]
Length = 590
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 147/326 (45%), Gaps = 54/326 (16%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCR-----------------------R 102
N E + L+ + DA + L +F L LN++D R
Sbjct: 124 NLETVWLQNTSITDA-GIKELASFERLAELNLSDTRITDRGLRELSDFQNLTTLWLQNVE 182
Query: 103 VTSSALWALTGMTCLKELDLSR-----CVKVTDAGMKHLLSISTLEKLWLSETGLTADGI 157
+T L AL + + LDLS +++TD G++ L + L L+L+ + G+
Sbjct: 183 MTDDGLQALKRLKTITTLDLSNLNGLNTIRITDEGLEQLSDLPELRHLYLANIPIADSGL 242
Query: 158 ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 217
L L++L+VLDL G +TD L L+ L +LE L +Q+S+ G LK L+ L
Sbjct: 243 TSLRRLKHLTVLDLRGTQITDEGLNELRGLHELETFKLTKTQISDAGLTALKGLKNLTTL 302
Query: 218 -----NLAWTGVTKLPNISSLECLNLSFIQQVGAE----------TDLVLSLTALQNLNH 262
+ TG+ +L N+ L+ L+LS Q E TDL LS T + ++
Sbjct: 303 LIGSNQITGTGLQELTNLDQLKTLDLSDTQVTDVELNRLSSIRTLTDLRLSDTPITDVGL 362
Query: 263 LERLNLEQ--------TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 314
L++ TQ++D + L+ ++L HL LR +TD LH L L LT+L
Sbjct: 363 RSLRELKRLRRLTLGGTQITDIS--ELNHLRDLTHLDLRVTPITDTGLHGLGDLKHLTSL 420
Query: 315 SIRDAVLTNSGLGSFKPPRSLKLLDL 340
++ +T++ L K LK L L
Sbjct: 421 NLDATQVTDASLSELKCLVHLKELSL 446
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 139/315 (44%), Gaps = 50/315 (15%)
Query: 65 HNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSR 124
H E +L DA A G + L +L + ++T + L LT + LK LDLS
Sbjct: 273 HELETFKLTKTQISDAGLTALKG-LKNLTTLLIG-SNQITGTGLQELTNLDQLKTLDLSD 330
Query: 125 CVKVTDAGMKHLLSISTLEKLWLSETGLTADG----------------------IALLSS 162
+VTD + L SI TL L LS+T +T G I+ L+
Sbjct: 331 T-QVTDVELNRLSSIRTLTDLRLSDTPITDVGLRSLRELKRLRRLTLGGTQITDISELNH 389
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT 222
L++L+ LDL P+TD L L L L L+L +QV++ + LK L L+L+ T
Sbjct: 390 LRDLTHLDLRVTPITDTGLHGLGDLKHLTSLNLDATQVTDASLSELKCLVHLKELSLSRT 449
Query: 223 GVTKLPNISSLE------------CL----NLSFIQQVGAETDLVLS--------LTALQ 258
++ L SLE CL L I + + LV+S L L
Sbjct: 450 AISGL-GFKSLERLEQLTVLRCDRCLIADEGLREICTLKSLKTLVISGTRVTDDGLAELH 508
Query: 259 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 318
L L+ L +E ++DA + L +L L + + +TD SL + L LT L IR+
Sbjct: 509 QLEGLQELRIENNALTDAGMSELMVLGKLRTLGISHNKITDTSLSDIKRLKNLTMLRIRN 568
Query: 319 AVLTNSGLGSFKPPR 333
+T+SGL FK R
Sbjct: 569 TEITDSGLNGFKDAR 583
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 113/244 (46%), Gaps = 18/244 (7%)
Query: 108 LWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLS 167
L L +T L L+LS ++TD G+ HL ++ LE +WL T +T GI L+S + L+
Sbjct: 92 LKELADLTSLVNLNLSDT-RITDRGLFHLKRLTNLETVWLQNTSITDAGIKELASFERLA 150
Query: 168 VLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW------ 221
L+L +TD LR L L L L ++++ G LK ++ L+L+
Sbjct: 151 ELNLSDTRITDRGLRELSDFQNLTTLWLQNVEMTDDGLQALKRLKTITTLDLSNLNGLNT 210
Query: 222 -----TGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDA 276
G+ +L ++ L L L+ I + LT+L+ L HL L+L TQ++D
Sbjct: 211 IRITDEGLEQLSDLPELRHLYLANIPIADS------GLTSLRRLKHLTVLDLRGTQITDE 264
Query: 277 TLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLK 336
L L EL L ++D L L L LT L I +T +GL LK
Sbjct: 265 GLNELRGLHELETFKLTKTQISDAGLTALKGLKNLTTLLIGSNQITGTGLQELTNLDQLK 324
Query: 337 LLDL 340
LDL
Sbjct: 325 TLDL 328
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 141/300 (47%), Gaps = 31/300 (10%)
Query: 81 EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
E ++ L R+L N+ + S L +L + L LDL R ++TD G+ L +
Sbjct: 219 EQLSDLPELRHLYLANIP----IADSGLTSLRRLKHLTVLDL-RGTQITDEGLNELRGLH 273
Query: 141 TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 200
LE L++T ++ G+ L L+NL+ L +G +T L+ L L +L+ LDL +QV
Sbjct: 274 ELETFKLTKTQISDAGLTALKGLKNLTTLLIGSNQITGTGLQELTNLDQLKTLDLSDTQV 333
Query: 201 SNRGAAVLKMFPRLSFLNLAWT---------------------GVTKLPNISSLECL-NL 238
++ L L+ L L+ T G T++ +IS L L +L
Sbjct: 334 TDVELNRLSSIRTLTDLRLSDTPITDVGLRSLRELKRLRRLTLGGTQITDISELNHLRDL 393
Query: 239 SFIQ-QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 297
+ + +V TD L L +L HL LNL+ TQV+DA+L L L LSL ++
Sbjct: 394 THLDLRVTPITDT--GLHGLGDLKHLTSLNLDATQVTDASLSELKCLVHLKELSLSRTAI 451
Query: 298 TDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKM 357
+ + L L +LT L ++ + GL +SLK L + G +T+D + + ++
Sbjct: 452 SGLGFKSLERLEQLTVLRCDRCLIADEGLREICTLKSLKTLVISGTR-VTDDGLAELHQL 510
>gi|356548547|ref|XP_003542662.1| PREDICTED: F-box/LRR-repeat protein 14-like [Glycine max]
Length = 578
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 150/328 (45%), Gaps = 39/328 (11%)
Query: 55 IFPSLLEVFKH--NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALT 112
+ P + F + N E ++L + + ++ +L + L LN+ C+ VT S + +++
Sbjct: 194 VKPDGMRAFSNLFNLEKLDLERCSEIHGGFV-HLKGLKKLEYLNIGCCKCVTDSDIKSIS 252
Query: 113 GMTCLKELDLSRCVKVTDAGMKHLL------------------------SISTLEKLWLS 148
+ LKEL +S +TD G+ +L ++++L L L+
Sbjct: 253 ELINLKELQISN-SSITDIGITYLRGLEKLTTLNVEGCNITAACLEFIHALTSLACLNLN 311
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
GL+ DG +S L+NL L L +TD L L+ LT LEYL+L ++ + G A L
Sbjct: 312 RCGLSDDGFEKISGLKNLKRLSLAFNRITDACLVHLKDLTNLEYLNLDSCRIGDGGLANL 371
Query: 209 KMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHL 263
L L L+ T G+ + + LE LN+SF L L L L
Sbjct: 372 TGLTLLKSLVLSDTDIGNSGLRYISGLKKLEDLNVSFTTVTDN------GLKRLSGLTQL 425
Query: 264 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
+ LNL+ Q++DA L L++ LI L L A ++D L S L +L I LT+
Sbjct: 426 KSLNLDARQITDAGLANLTSLSGLITLDLFGARISDNGTTFLRSFKNLQSLEICGGGLTD 485
Query: 324 SGLGSFKPPRSLKLLDLHGGWLLTEDAI 351
+G+ + + SL L+L LT+ +
Sbjct: 486 AGVKNIREIVSLTQLNLSQNCNLTDKTL 513
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 158/351 (45%), Gaps = 47/351 (13%)
Query: 9 LVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNA- 67
L+ LCI+ + E K+ S LP ++ + L+ + LE F+ A
Sbjct: 56 LMDLCIK---KMREDFHKYN----SFSILPRDISQQIFNELVDSHCLTEVSLEAFRDCAL 108
Query: 68 EAIELRGENSVDAEWMAYLGAFRY-LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCV 126
+ I+L V+ +WM + + L S++VA +VT L L + L+ L LS C
Sbjct: 109 QDIDLGEYVGVNDDWMDVISSQGLSLLSVDVAG-SQVTDDGLRLLKDCSSLQALTLSYCD 167
Query: 127 KVTDAGMKHLLSISTL-------------------------EKLWLSETGLTADGIALLS 161
+ ++ G+KH+ +S L EKL L G L
Sbjct: 168 QFSEYGLKHISGLSNLTSLSIRKSSSVKPDGMRAFSNLFNLEKLDLERCSEIHGGFVHLK 227
Query: 162 SLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA 220
L+ L L++G VTD ++S+ L L+ L + S +++ G L+ +L+ LN+
Sbjct: 228 GLKKLEYLNIGCCKCVTDSDIKSISELINLKELQISNSSITDIGITYLRGLEKLTTLNVE 287
Query: 221 WTGVTK-----LPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
+T + ++SL CLNL+ + G D ++ L+N L+RL+L +++D
Sbjct: 288 GCNITAACLEFIHALTSLACLNLN---RCGLSDDGFEKISGLKN---LKRLSLAFNRITD 341
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 326
A L L L +L+L + + D L L+ L+ L +L + D + NSGL
Sbjct: 342 ACLVHLKDLTNLEYLNLDSCRIGDGGLANLTGLTLLKSLVLSDTDIGNSGL 392
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 117/237 (49%), Gaps = 12/237 (5%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + + +L L LN+ CR + L LTG+T LK L LS + ++G+++
Sbjct: 337 NRITDACLVHLKDLTNLEYLNLDSCR-IGDGGLANLTGLTLLKSLVLSD-TDIGNSGLRY 394
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ + LE L +S T +T +G+ LS L L L+L +TD L +L L+ L LDL
Sbjct: 395 ISGLKKLEDLNVSFTTVTDNGLKRLSGLTQLKSLNLDARQITDAGLANLTSLSGLITLDL 454
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSFIQQVGAETDL 250
+G+++S+ G L+ F L L + G+T + I SL LNLS Q TD
Sbjct: 455 FGARISDNGTTFLRSFKNLQSLEICGGGLTDAGVKNIREIVSLTQLNLS---QNCNLTDK 511
Query: 251 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 307
L L + + L LN+ +++++ L L K L L+L + +T + +L S
Sbjct: 512 TLEL--ISGMTALRSLNVSNSRITNEGLRHLKPLKNLRTLTLESCKVTASGIKKLQS 566
>gi|46447653|ref|YP_009018.1| hypothetical protein pc2019 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401294|emb|CAF24743.1| hypothetical protein pc2019 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 959
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/270 (33%), Positives = 146/270 (54%), Gaps = 17/270 (6%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+A+L + L L++++C +T + L L + L++LDL+ C +TDAG+ HL+++ L
Sbjct: 635 LAHLTSLVNLTHLSLSECGNLTDAGLAHLAPLVALQQLDLNFCYNLTDAGLAHLITLVAL 694
Query: 143 EKLWLSETG-LTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDLWG-SQ 199
++L+LS G LT G+A L+ L L L+L G +T + L L L L +L L +
Sbjct: 695 QQLYLSACGNLTDAGLAHLTPLVALQQLNLSGCKKLTGVGLAHLTSLATLTHLSLSACAN 754
Query: 200 VSNRGAAVLKMFPRLSFLNLA------WTGVTKLPNISSLECLNLSFIQQVGAETDLVLS 253
+++ G A L L++LNL+ G+T L + +L+ L+LS +++ TD
Sbjct: 755 LTDDGLAHLTTLVALTYLNLSDCNNFTGAGLTHLKPLVALQYLSLSGCKKL---TD--AG 809
Query: 254 LTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKL 311
L L+ L L++LNL +++DA L L + L LSL LTD L L L L
Sbjct: 810 LAYLKPLVALQQLNLRGCKKITDAGLTHLMSLVALQCLSLSGCKKLTDDGLAHLKPLVAL 869
Query: 312 TNLSIRDAV-LTNSGLGSFKPPRSLKLLDL 340
T+LS+ + V LT+ GL P +L L+L
Sbjct: 870 THLSLGECVKLTDDGLAHLTPLLALTHLNL 899
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 103/305 (33%), Positives = 150/305 (49%), Gaps = 39/305 (12%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+A+L + L L +A C +T + L L + L+ L+L+ C K+TDAG+ HL S+ TL
Sbjct: 384 LAHLDSLIDLTQLGLAKCHNITDNGLAYLRPLIALQGLNLNGCKKLTDAGLVHLKSLVTL 443
Query: 143 EKLWLSET-GLTADGIALLSSLQNLSVLDLG--GLPVTDLVLRSLQVLTKLEYLDL-WGS 198
L LS+ LT G+A L+ L L LDL +TD L L L L+ LDL +
Sbjct: 444 TYLNLSQCDDLTDAGLAHLTPLVALQHLDLSFCCYNITDAGLAHLTPLVALQNLDLSFCY 503
Query: 199 QVSNRGAAVLKMFPRLSFL------NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVL 252
++++ G A LK L L NL G+ L + +L+ L+L F + TD L
Sbjct: 504 KLTDDGLAHLKPLVALKQLNLWACSNLTGAGLAHLTPLIALKHLDLGFCYGL---TDDGL 560
Query: 253 S----LTALQNLN-------------HLERL-NLEQTQVS---DATLFPLSTFKELIHLS 291
+ L ALQ L+ HL L L+Q +S + T L+ K LI L
Sbjct: 561 AHLKPLVALQYLSLSGCKKLTDAGLAHLTSLITLQQLNISSCANLTDDGLAHLKPLIALQ 620
Query: 292 LRNAS----LTDVSLHQLSSLSKLTNLSIRD-AVLTNSGLGSFKPPRSLKLLDLHGGWLL 346
N S LT V L L+SL LT+LS+ + LT++GL P +L+ LDL+ + L
Sbjct: 621 QLNLSSCKKLTGVGLAHLTSLVNLTHLSLSECGNLTDAGLAHLAPLVALQQLDLNFCYNL 680
Query: 347 TEDAI 351
T+ +
Sbjct: 681 TDAGL 685
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 101/322 (31%), Positives = 143/322 (44%), Gaps = 44/322 (13%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ + L G + +A+L + L+ LN++ C +T L L + L++L+LS C K
Sbjct: 570 QYLSLSGCKKLTDAGLAHLTSLITLQQLNISSCANLTDDGLAHLKPLIALQQLNLSSCKK 629
Query: 128 VTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDL--------GGLP--- 175
+T G+ HL S+ L L LSE G LT G+A L+ L L LDL GL
Sbjct: 630 LTGVGLAHLTSLVNLTHLSLSECGNLTDAGLAHLAPLVALQQLDLNFCYNLTDAGLAHLI 689
Query: 176 ---------------VTDLVLRSLQVLTKLEYLDLWGS-QVSNRGAAVLKMFPRLSFL-- 217
+TD L L L L+ L+L G +++ G A L L+ L
Sbjct: 690 TLVALQQLYLSACGNLTDAGLAHLTPLVALQQLNLSGCKKLTGVGLAHLTSLATLTHLSL 749
Query: 218 ----NLAWTGVTKLPNISSLECLNLSFIQQ-VGAETDLVLSLTALQNLNHLERLNLEQT- 271
NL G+ L + +L LNLS GA LT L+ L L+ L+L
Sbjct: 750 SACANLTDDGLAHLTTLVALTYLNLSDCNNFTGA------GLTHLKPLVALQYLSLSGCK 803
Query: 272 QVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDA-VLTNSGLGSF 329
+++DA L L L L+LR +TD L L SL L LS+ LT+ GL
Sbjct: 804 KLTDAGLAYLKPLVALQQLNLRGCKKITDAGLTHLMSLVALQCLSLSGCKKLTDDGLAHL 863
Query: 330 KPPRSLKLLDLHGGWLLTEDAI 351
KP +L L L LT+D +
Sbjct: 864 KPLVALTHLSLGECVKLTDDGL 885
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 147/309 (47%), Gaps = 18/309 (5%)
Query: 56 FPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMT 115
F +L+ F + E + S+ + L + L+ L + +C +T L L +
Sbjct: 307 FEKILKCFSNEIERLNFSKNASLTDAHLLALKDCKKLKVLYLQECNNLTDVGLAYLRPLI 366
Query: 116 CLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGL 174
L+ L+L+ C K TDAG+ HL S+ L +L L++ +T +G+A L L L L+L G
Sbjct: 367 TLQGLNLNSCKKFTDAGLAHLDSLIDLTQLGLAKCHNITDNGLAYLRPLIALQGLNLNGC 426
Query: 175 -PVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW-------TGVT 225
+TD L L+ L L YL+L +++ G A L L L+L++ G+
Sbjct: 427 KKLTDAGLVHLKSLVTLTYLNLSQCDDLTDAGLAHLTPLVALQHLDLSFCCYNITDAGLA 486
Query: 226 KLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNL-EQTQVSDATLFPLSTF 284
L + +L+ L+LSF ++ + L L+ L L++LNL + ++ A L L+
Sbjct: 487 HLTPLVALQNLDLSFCYKLTDD-----GLAHLKPLVALKQLNLWACSNLTGAGLAHLTPL 541
Query: 285 KELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDA-VLTNSGLGSFKPPRSLKLLDLHG 342
L HL L LTD L L L L LS+ LT++GL +L+ L++
Sbjct: 542 IALKHLDLGFCYGLTDDGLAHLKPLVALQYLSLSGCKKLTDAGLAHLTSLITLQQLNISS 601
Query: 343 GWLLTEDAI 351
LT+D +
Sbjct: 602 CANLTDDGL 610
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ + LRG + + +L + L+ L+++ C+++T L L + L L L CVK
Sbjct: 820 QQLNLRGCKKITDAGLTHLMSLVALQCLSLSGCKKLTDDGLAHLKPLVALTHLSLGECVK 879
Query: 128 VTDAGMKHLLSISTLEKLWLSE-TGLTADGIALLSSLQNLSVLDLGG 173
+TD G+ HL + L L LS+ LT G+A L+ L+NL+ +DL
Sbjct: 880 LTDDGLAHLTPLLALTHLNLSDCNNLTVAGLAHLTPLENLTYVDLNN 926
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 11/206 (5%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ + L G + +A+L + L L+++ C +T L LT + L L+LS C
Sbjct: 720 QQLNLSGCKKLTGVGLAHLTSLATLTHLSLSACANLTDDGLAHLTTLVALTYLNLSDCNN 779
Query: 128 VTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQ 185
T AG+ HL + L+ L LS LT G+A L L L L+L G +TD L L
Sbjct: 780 FTGAGLTHLKPLVALQYLSLSGCKKLTDAGLAYLKPLVALQQLNLRGCKKITDAGLTHLM 839
Query: 186 VLTKLEYLDLWGS-QVSNRGAAVLKMFPRLSFLNLAWT------GVTKLPNISSLECLNL 238
L L+ L L G ++++ G A LK L+ L+L G+ L + +L LNL
Sbjct: 840 SLVALQCLSLSGCKKLTDDGLAHLKPLVALTHLSLGECVKLTDDGLAHLTPLLALTHLNL 899
Query: 239 SFIQQVGAETDLVLSLTALQNLNHLE 264
S + + LT L+NL +++
Sbjct: 900 SDCNNLTVAG--LAHLTPLENLTYVD 923
>gi|46447096|ref|YP_008461.1| hypothetical protein pc1462 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400737|emb|CAF24186.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 870
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 103/301 (34%), Positives = 146/301 (48%), Gaps = 23/301 (7%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ ++L ++ + +A+L LR L ++DCR +T + L LT +T LK LDLS C
Sbjct: 437 QHLDLSKCENLTGDGLAHLTPLVALRHLGLSDCRNLTDAGLAHLTPLTALKHLDLSECKN 496
Query: 128 VTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG---GL--PVTDLVL 181
+TD G+ HL S+ L+ L L LT G+A L+SL L LDLG G +TD L
Sbjct: 497 LTDDGLVHLSSLVALQYLSLKLCENLTDAGLAHLTSLTALEHLDLGLDFGYCQNLTDDGL 556
Query: 182 RSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAWT------GVTKLPNISSLE 234
L LT L++LDL W +++ G A L L L+L+W G+ L + +L+
Sbjct: 557 AHLSSLTALKHLDLSWRENLTDAGLAHLTSLTALKHLDLSWCENLTDEGLAYLTPLVALQ 616
Query: 235 CLNL--SFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL 292
L+L S I G E L L L HL LN + L L+T L HL L
Sbjct: 617 YLSLKGSDITDEGLE-----HLAHLSALRHLS-LNDCRRIYHGYGLAHLTTLVNLEHLDL 670
Query: 293 RNA-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 350
SL+ L LSSL L +L++ L + GL P +L+ LDL LT+
Sbjct: 671 SGCYSLSSFKLIFLSSLVNLQHLNLSGCFGLYHDGLEDLTPLMNLQYLDLSSCINLTDKG 730
Query: 351 I 351
+
Sbjct: 731 L 731
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 146/301 (48%), Gaps = 36/301 (11%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+A+L + L++L++++C + + L L+ +T L+ LDLS C +TDAG+ HL + +L
Sbjct: 377 LAHLTSLTALQNLDLSECYLLKDTGLAHLSSLTALQYLDLSGCDDLTDAGLAHLTPLVSL 436
Query: 143 EKLWLSET-GLTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDLWGSQ- 199
+ L LS+ LT DG+A L+ L L L L +TD L L LT L++LDL +
Sbjct: 437 QHLDLSKCENLTGDGLAHLTPLVALRHLGLSDCRNLTDAGLAHLTPLTALKHLDLSECKN 496
Query: 200 VSNRGAAVLKMFPRLSFL------NLAWTGVTKLPNISSLECLNLS--FIQQVGAETDLV 251
+++ G L L +L NL G+ L ++++LE L+L F D +
Sbjct: 497 LTDDGLVHLSSLVALQYLSLKLCENLTDAGLAHLTSLTALEHLDLGLDFGYCQNLTDDGL 556
Query: 252 LSLTALQNLNHLE---RLNLEQT--------------------QVSDATLFPLSTFKELI 288
L++L L HL+ R NL ++D L L+ L
Sbjct: 557 AHLSSLTALKHLDLSWRENLTDAGLAHLTSLTALKHLDLSWCENLTDEGLAYLTPLVALQ 616
Query: 289 HLSLRNASLTDVSLHQLSSLSKLTNLSIRDA--VLTNSGLGSFKPPRSLKLLDLHGGWLL 346
+LSL+ + +TD L L+ LS L +LS+ D + GL +L+ LDL G + L
Sbjct: 617 YLSLKGSDITDEGLEHLAHLSALRHLSLNDCRRIYHGYGLAHLTTLVNLEHLDLSGCYSL 676
Query: 347 T 347
+
Sbjct: 677 S 677
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 127/265 (47%), Gaps = 21/265 (7%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
+ LN++ T + AL LK L L D G+ HL S++ L+ L LSE
Sbjct: 336 IEELNLSGKDFFTEAHFLALKNCKNLKVLCLKIFYTPIDTGLAHLTSLTALQNLDLSECY 395
Query: 152 LTAD-GIALLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVL 208
L D G+A LSSL L LDL G +TD L L L L++LDL + ++ G A L
Sbjct: 396 LLKDTGLAHLSSLTALQYLDLSGCDDLTDAGLAHLTPLVSLQHLDLSKCENLTGDGLAHL 455
Query: 209 KMFPRLSFL------NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNH 262
L L NL G+ L +++L+ L+LS + + + L L +L
Sbjct: 456 TPLVALRHLGLSDCRNLTDAGLAHLTPLTALKHLDLSECKNLTDD-----GLVHLSSLVA 510
Query: 263 LERLNLEQTQ-VSDATLFPLSTFKELIHLSL-----RNASLTDVSLHQLSSLSKLTNLSI 316
L+ L+L+ + ++DA L L++ L HL L +LTD L LSSL+ L +L +
Sbjct: 511 LQYLSLKLCENLTDAGLAHLTSLTALEHLDLGLDFGYCQNLTDDGLAHLSSLTALKHLDL 570
Query: 317 R-DAVLTNSGLGSFKPPRSLKLLDL 340
LT++GL +LK LDL
Sbjct: 571 SWRENLTDAGLAHLTSLTALKHLDL 595
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 157/340 (46%), Gaps = 44/340 (12%)
Query: 36 RLPAHLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSL 95
+L +L D+ L HL L +H ++ ++ + +A+L + L+ L
Sbjct: 517 KLCENLTDAGLAHLTS--------LTALEHLDLGLDFGYCQNLTDDGLAHLSSLTALKHL 568
Query: 96 NVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTAD 155
+++ +T + L LT +T LK LDLS C +TD G+ +L + L+ L L + +T +
Sbjct: 569 DLSWRENLTDAGLAHLTSLTALKHLDLSWCENLTDEGLAYLTPLVALQYLSLKGSDITDE 628
Query: 156 G---IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS-QVSNRGAAVLKMF 211
G +A LS+L++LS+ D + L L L LE+LDL G +S+ L
Sbjct: 629 GLEHLAHLSALRHLSLNDCRRI-YHGYGLAHLTTLVNLEHLDLSGCYSLSSFKLIFLSSL 687
Query: 212 PRLSFLNLAWT---------GVTKLPNISSLE---CLNLS----------------FIQQ 243
L LNL+ +T L N+ L+ C+NL+ +
Sbjct: 688 VNLQHLNLSGCFGLYHDGLEDLTPLMNLQYLDLSSCINLTDKGLAYLTSLVGLGLQHLDL 747
Query: 244 VGAETDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTFKELIHLSLRNA-SLTDVS 301
G + L L +L LE L+L + ++D L L++F L +L+L+ +TD
Sbjct: 748 SGCKEITDTGLAHLTSLVGLEYLDLSWCENLTDKGLAYLTSFAGLKYLNLKGCKKITDAG 807
Query: 302 LHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDL 340
L L+SL L L++ + V LT++GL +L+ L+L
Sbjct: 808 LAHLTSLVTLQRLNLSECVNLTDTGLAHLVSLVNLQDLEL 847
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 55/101 (54%), Gaps = 9/101 (8%)
Query: 67 AEAIELRGENSVDAEW--------MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLK 118
A L G +D W +AYL +F L+ LN+ C+++T + L LT + L+
Sbjct: 759 AHLTSLVGLEYLDLSWCENLTDKGLAYLTSFAGLKYLNLKGCKKITDAGLAHLTSLVTLQ 818
Query: 119 ELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIA 158
L+LS CV +TD G+ HL+S+ L+ L L E +T G+A
Sbjct: 819 RLNLSECVNLTDTGLAHLVSLVNLQDLELRECKSITDTGLA 859
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ + L+G + +A+L + L+ LN+++C +T + L L + L++L+L C
Sbjct: 793 KYLNLKGCKKITDAGLAHLTSLVTLQRLNLSECVNLTDTGLAHLVSLVNLQDLELRECKS 852
Query: 128 VTDAGMKHLL 137
+TD G+ H +
Sbjct: 853 ITDTGLAHYI 862
>gi|13507547|gb|AAK28636.1|AF360339_1 unknown protein [Arabidopsis thaliana]
Length = 585
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 135/295 (45%), Gaps = 38/295 (12%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N + ++L +D + +L A L SLN+ C +T + + L+ +T L+ L + C
Sbjct: 213 NLKKLDLEKCPGIDG-GLVHLRALTKLESLNIKWCNCITDADMEPLSVLTNLRRLQIC-C 270
Query: 126 VKVTDAGMKH-------------------------LLSISTLEKLWLSETGLTADGIALL 160
K+TD G+ + L +++ L L L+ + G
Sbjct: 271 SKITDIGISYLKGLNKLNLLNLEGCRHVTAACLDTLTALAGLMYLNLNRCNFSDSGCEKF 330
Query: 161 SSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA 220
S L NL +L+LG +T+ L L+ LTKLE L+L ++ + G L L L L+
Sbjct: 331 SDLINLKILNLGMNNITNSCLVHLKGLTKLESLNLDSCRIGDEGLVHLSGMLELKSLELS 390
Query: 221 WT-----GVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
T G+ L +S+LE +NLSF + L L L L LNL+ V+D
Sbjct: 391 DTEVGSNGLRHLSGLSNLESINLSFTVVTDS------GLRKLSGLTSLRTLNLDARHVTD 444
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 330
A L L++ L HL L A +TD + L +L KL +L I LT++G+ + K
Sbjct: 445 AGLSALTSLTGLTHLDLFGARITDSGTNHLRNLKKLQSLEICGGGLTDTGVKNIK 499
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 134/303 (44%), Gaps = 38/303 (12%)
Query: 69 AIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV 128
+++ G + D+ ++ G L SLN C ++++ L L+G++ L L R +
Sbjct: 142 SVDFSGSDITDSGLVSLKGCTN-LESLNFNFCDQISNRGLVHLSGLSNLTSLSFRRNAAI 200
Query: 129 TDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVL 187
T GM+ L ++ L+KL L + G+ L +L L L++ +TD + L VL
Sbjct: 201 TAQGMRALSNLVNLKKLDLEKCPGIDGGLVHLRALTKLESLNIKWCNCITDADMEPLSVL 260
Query: 188 TKLEYLDLWGSQVSNRG----------------------AAVLK--------MFPRLSFL 217
T L L + S++++ G AA L M+ L+
Sbjct: 261 TNLRRLQICCSKITDIGISYLKGLNKLNLLNLEGCRHVTAACLDTLTALAGLMYLNLNRC 320
Query: 218 NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDAT 277
N + +G K ++ +L+ LNL + L L+ L LE LNL+ ++ D
Sbjct: 321 NFSDSGCEKFSDLINLKILNLGMNNITNS------CLVHLKGLTKLESLNLDSCRIGDEG 374
Query: 278 LFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKL 337
L LS EL L L + + L LS LS L ++++ V+T+SGL SL+
Sbjct: 375 LVHLSGMLELKSLELSDTEVGSNGLRHLSGLSNLESINLSFTVVTDSGLRKLSGLTSLRT 434
Query: 338 LDL 340
L+L
Sbjct: 435 LNL 437
>gi|168704615|ref|ZP_02736892.1| leucine-rich repeat domain protein [Gemmata obscuriglobus UQM 2246]
Length = 294
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 124/239 (51%), Gaps = 14/239 (5%)
Query: 72 LRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDA 131
L G DA+ + L AF++L L++ D + V+ + L LT L EL LSR KVTDA
Sbjct: 54 LEGTKIADAD-LKELAAFKHLAVLSLYDTQ-VSDAGLKELTSSKGLTELLLSR-TKVTDA 110
Query: 132 GMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLE 191
G+K + ++ LEKL L ET +T GI L L+ LS L L G +TD +++ L L
Sbjct: 111 GLKDVAKLTHLEKLALDETAVTDAGIGELVPLKRLSELWLMGTKITDAAFKNVAKLKGLT 170
Query: 192 YLDLWGSQVSNRG---AAVLKMFPR--LSFLNLAWTGVTKLPNISSLECLNLSFIQQVGA 246
L L G++++ G A + F LS +++ G+ ++ SL L LS +
Sbjct: 171 TLRLDGAKITGVGLKQVAAIDGFHSLYLSGTDISEAGLKEIAAFKSLRILQLSECKITDG 230
Query: 247 ETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 305
L L L+ L L+LE+TQV+DA + L++ K+L L L + +TD + +
Sbjct: 231 ------GLKELAALDKLTTLHLEKTQVTDAGVKSLASLKKLKVLHLTSTQVTDAGVKTI 283
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 47/89 (52%)
Query: 254 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 313
L L HL L+L TQVSDA L L++ K L L L +TD L ++ L+ L
Sbjct: 64 LKELAAFKHLAVLSLYDTQVSDAGLKELTSSKGLTELLLSRTKVTDAGLKDVAKLTHLEK 123
Query: 314 LSIRDAVLTNSGLGSFKPPRSLKLLDLHG 342
L++ + +T++G+G P + L L L G
Sbjct: 124 LALDETAVTDAGIGELVPLKRLSELWLMG 152
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 68/140 (48%), Gaps = 7/140 (5%)
Query: 72 LRGENSVDAEW--MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVT 129
L G DA + +A L LR D ++T L + + L LS ++
Sbjct: 150 LMGTKITDAAFKNVAKLKGLTTLR----LDGAKITGVGLKQVAAIDGFHSLYLSG-TDIS 204
Query: 130 DAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK 189
+AG+K + + +L L LSE +T G+ L++L L+ L L VTD ++SL L K
Sbjct: 205 EAGLKEIAAFKSLRILQLSECKITDGGLKELAALDKLTTLHLEKTQVTDAGVKSLASLKK 264
Query: 190 LEYLDLWGSQVSNRGAAVLK 209
L+ L L +QV++ G ++
Sbjct: 265 LKVLHLTSTQVTDAGVKTIR 284
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%)
Query: 268 LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 326
LE T+++DA L L+ FK L LSL + ++D L +L+S LT L + +T++GL
Sbjct: 54 LEGTKIADADLKELAAFKHLAVLSLYDTQVSDAGLKELTSSKGLTELLLSRTKVTDAGL 112
>gi|30684506|ref|NP_563980.2| leucine-rich repeat-containing protein [Arabidopsis thaliana]
gi|23297087|gb|AAN13089.1| unknown protein [Arabidopsis thaliana]
gi|332191234|gb|AEE29355.1| leucine-rich repeat-containing protein [Arabidopsis thaliana]
Length = 585
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 135/295 (45%), Gaps = 38/295 (12%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N + ++L +D + +L A L SLN+ C +T + + L+ +T L+ L + C
Sbjct: 213 NLKKLDLEKCPGIDG-GLVHLRALTKLESLNIKWCNCITDADMEPLSVLTNLRSLQIC-C 270
Query: 126 VKVTDAGMKH-------------------------LLSISTLEKLWLSETGLTADGIALL 160
K+TD G+ + L +++ L L L+ + G
Sbjct: 271 SKITDIGISYLKGLNKLNLLNLEGCRHVTAACLDTLTALAGLMYLNLNRCNFSDSGCEKF 330
Query: 161 SSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA 220
S L NL +L+LG +T+ L L+ LTKLE L+L ++ + G L L L L+
Sbjct: 331 SDLINLKILNLGMNNITNSCLVHLKGLTKLESLNLDSCRIGDEGLVHLSGMLELKSLELS 390
Query: 221 WT-----GVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
T G+ L +S+LE +NLSF + L L L L LNL+ V+D
Sbjct: 391 DTEVGSNGLRHLSGLSNLESINLSFTVVTDS------GLRKLSGLTSLRTLNLDARHVTD 444
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 330
A L L++ L HL L A +TD + L +L KL +L I LT++G+ + K
Sbjct: 445 AGLSALTSLTGLTHLDLFGARITDSGTNHLRNLKKLQSLEICGGGLTDTGVKNIK 499
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 140/330 (42%), Gaps = 52/330 (15%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N E++ + + + +L L SL+ +T+ + AL+ + LK+LDL +C
Sbjct: 163 NLESLNFNFCDQISNRGLVHLSGLSNLTSLSFRRNAAITAQGMRALSNLVNLKKLDLEKC 222
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADG-IALLSSLQNLSVLDLGGLPVTDL----- 179
+ D G+ HL +++ LE L + D + LS L NL L + +TD+
Sbjct: 223 PGI-DGGLVHLRALTKLESLNIKWCNCITDADMEPLSVLTNLRSLQICCSKITDIGISYL 281
Query: 180 --------------------VLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL 219
L +L L L YL+L S+ G L LNL
Sbjct: 282 KGLNKLNLLNLEGCRHVTAACLDTLTALAGLMYLNLNRCNFSDSGCEKFSDLINLKILNL 341
Query: 220 AWTGVTK-----LPNISSLECLNLSFIQQVGAETDLVLS-------------------LT 255
+T L ++ LE LNL ++G E + LS L
Sbjct: 342 GMNNITNSCLVHLKGLTKLESLNLDSC-RIGDEGLVHLSGMLELKSLELSDTEVGSNGLR 400
Query: 256 ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLS 315
L L++LE +NL T V+D+ L LS L L+L +TD L L+SL+ LT+L
Sbjct: 401 HLSGLSNLESINLSFTVVTDSGLRKLSGLTSLRTLNLDARHVTDAGLSALTSLTGLTHLD 460
Query: 316 IRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 345
+ A +T+SG + + L+ L++ GG L
Sbjct: 461 LFGARITDSGTNHLRNLKKLQSLEICGGGL 490
>gi|46446776|ref|YP_008141.1| hypothetical protein pc1142 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400417|emb|CAF23866.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 590
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 113/366 (30%), Positives = 172/366 (46%), Gaps = 47/366 (12%)
Query: 30 QRRSLERLPAHLADSL--LRHLIRRRLIFPSLLEVFK-HNAEAIELRGENSVDAEWMAYL 86
Q ER+ HL++ + L L L LL + N + + + V +A+L
Sbjct: 212 QLSEFERIINHLSNKIEALNFLENTHLTNAHLLALKDCKNVKVLYFKKCRDVTDAGLAHL 271
Query: 87 GAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLW 146
L+ L ++DC +T + L LT +T L+ LDLS C +TD+G+ HL + L+ L
Sbjct: 272 TPLTALQHLGLSDCENLTDAGLAHLTTLTALQHLDLSGCWNLTDSGLVHLTPLVGLQHLG 331
Query: 147 LSET-GLTADGIALLSSLQNLSVLDL-GGLPVTDLVLRSLQVLTKLEYLDL-WGSQVSNR 203
LS+ LT G+A L+SL L LDL +TD L L LT L++LDL +++
Sbjct: 332 LSDCENLTVAGLAHLTSLTALQHLDLRNCYNLTDAGLAHLTPLTALQHLDLSCCYNLTDA 391
Query: 204 GAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSFIQQVGAETDLVLS-LTA 256
G A L L LNL G+ L +++L+ L+LS+ + TD L+ LT
Sbjct: 392 GLAHLTPLTALQHLNLCCCRKLTDAGLAHLTPLTALQHLDLSYCYNL---TDAGLAHLTP 448
Query: 257 LQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNL 314
L L H LNL + +++ A L L+ L HL+L +LTD L L+ L+ L +L
Sbjct: 449 LTALLH---LNLSECWKLTGAGLAHLTPLVALQHLNLSKCNNLTDAGLVHLAPLTALQHL 505
Query: 315 SI------RDA--------------------VLTNSGLGSFKPPRSLKLLDLHGGWLLTE 348
++ DA LT++GL P +L+ LDL G LT+
Sbjct: 506 NLSWCKKFTDAGLAHLTLLTALQSLDLIGCNNLTDAGLVHLTPLTALQYLDLIGCKNLTD 565
Query: 349 DAILQF 354
+ +F
Sbjct: 566 AGLERF 571
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 138/282 (48%), Gaps = 33/282 (11%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ ++L G ++ + +L L+ L ++DC +T + L LT +T L+ LDL C
Sbjct: 303 QHLDLSGCWNLTDSGLVHLTPLVGLQHLGLSDCENLTVAGLAHLTSLTALQHLDLRNCYN 362
Query: 128 VTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQ 185
+TDAG+ HL ++ L+ L LS LT G+A L+ L L L+L +TD L L
Sbjct: 363 LTDAGLAHLTPLTALQHLDLSCCYNLTDAGLAHLTPLTALQHLNLCCCRKLTDAGLAHLT 422
Query: 186 VLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLA--W----TGVTKLPNISSLECLNL 238
LT L++LDL + +++ G A L L LNL+ W G+ L + +L+ LNL
Sbjct: 423 PLTALQHLDLSYCYNLTDAGLAHLTPLTALLHLNLSECWKLTGAGLAHLTPLVALQHLNL 482
Query: 239 SFIQQVGAETDLV--LSLTALQNLN-------------------HLERLNL-EQTQVSDA 276
S + + LV LTALQ+LN L+ L+L ++DA
Sbjct: 483 SKCNNL-TDAGLVHLAPLTALQHLNLSWCKKFTDAGLAHLTLLTALQSLDLIGCNNLTDA 541
Query: 277 TLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIR 317
L L+ L +L L +LTD L + +L+ L NL+I+
Sbjct: 542 GLVHLTPLTALQYLDLIGCKNLTDAGLERFKTLAALPNLTIK 583
>gi|283780172|ref|YP_003370927.1| hypothetical protein Psta_2397 [Pirellula staleyi DSM 6068]
gi|283438625|gb|ADB17067.1| leucine-rich repeat cysteine-containing subtype [Pirellula staleyi
DSM 6068]
Length = 443
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 120/251 (47%), Gaps = 18/251 (7%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
+ + + + +A + L L++ DC +VT + L L GMT LK L + +TD M
Sbjct: 176 QTNFNDDCLAAIKDMSQLELLDLQDCNQVTEAGLAPLAGMTKLKSLRIYGPT-ITDTVMG 234
Query: 135 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDL-GGLPVTDLVLRSLQVLTKLEYL 193
++ L L L ++ + DG+ ++ L L L L G VTD L + L LE L
Sbjct: 235 YIKDCKNLASLSLEQSAVGVDGMKVIGGLSKLKELKLYGASNVTDDALAQIAGLKDLEIL 294
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWT------GVTKLPNISSLECLNL--SFIQQVG 245
+L + +++G L +L L+L+ T G+ L +++LE +NL +F+ G
Sbjct: 295 ELRSTTTTSKGMVHLAGMSKLKLLDLSETANIDNAGLAALAPLTNLEEINLWYTFVDDAG 354
Query: 246 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 305
L L + L+RLNL++ QV+DA L L L L + + +TD L +L
Sbjct: 355 --------LAPLAGMTKLKRLNLDKCQVTDAGLVHLKGLSNLEFLHIGSTRVTDTGLAEL 406
Query: 306 SSLSKLTNLSI 316
L L +L I
Sbjct: 407 EGLKNLKHLVI 417
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 120/248 (48%), Gaps = 9/248 (3%)
Query: 98 ADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGI 157
A+ R VT + L L G L+ L L VTDAGM+HL + LE + L LT+ G
Sbjct: 102 ANVRGVTDAGLANLDGHPTLRILVL-ELSSVTDAGMEHLTKLPALEDIQLKRCDLTSKGY 160
Query: 158 ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSF 216
L+ ++ L + D L +++ +++LE LDL +QV+ G A L +L
Sbjct: 161 ESLAKIKTLRRIRAPQTNFNDDCLAAIKDMSQLELLDLQDCNQVTEAGLAPLAGMTKLKS 220
Query: 217 LNLAWTGVTKLPNISSLECLNLS--FIQQVGAETDLVLSLTALQNLNHLERLNL-EQTQV 273
L + +T +C NL+ ++Q D + + L+ L+ L L + V
Sbjct: 221 LRIYGPTITDTVMGYIKDCKNLASLSLEQSAVGVD---GMKVIGGLSKLKELKLYGASNV 277
Query: 274 SDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD-AVLTNSGLGSFKPP 332
+D L ++ K+L L LR+ + T + L+ +SKL L + + A + N+GL + P
Sbjct: 278 TDDALAQIAGLKDLEILELRSTTTTSKGMVHLAGMSKLKLLDLSETANIDNAGLAALAPL 337
Query: 333 RSLKLLDL 340
+L+ ++L
Sbjct: 338 TNLEEINL 345
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 88/175 (50%), Gaps = 11/175 (6%)
Query: 70 IELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVT 129
++L G ++V + +A + + L L + TS + L GM+ LK LDLS +
Sbjct: 269 LKLYGASNVTDDALAQIAGLKDLEILELRSTT-TTSKGMVHLAGMSKLKLLDLSETANID 327
Query: 130 DAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK 189
+AG+ L ++ LE++ L T + G+A L+ + L L+L VTD L L+ L+
Sbjct: 328 NAGLAALAPLTNLEEINLWYTFVDDAGLAPLAGMTKLKRLNLDKCQVTDAGLVHLKGLSN 387
Query: 190 LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTK----LPNISSLE 234
LE+L + ++V++ G A L+ L L + + GV K LP ++ +E
Sbjct: 388 LEFLHIGSTRVTDTGLAELEGLKNLKHLVITFCNDISDDGVAKLQAALPGLTKIE 442
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 103/233 (44%), Gaps = 26/233 (11%)
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
V+ +D +KHL + +L +L + G+T G+A L L +L L VTD + L
Sbjct: 81 VEGSDENLKHLKGLPSLTRLEANVRGVTDAGLANLDGHPTLRILVLELSSVTDAGMEHLT 140
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVG 245
L LE + L ++++G + + K+ + + +F
Sbjct: 141 KLPALEDIQLKRCDLTSKG----------------YESLAKIKTLRRIRAPQTNFNDDC- 183
Query: 246 AETDLVLSLTALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQ 304
L A+++++ LE L+L+ QV++A L PL+ +L L + ++TD +
Sbjct: 184 --------LAAIKDMSQLELLDLQDCNQVTEAGLAPLAGMTKLKSLRIYGPTITDTVMGY 235
Query: 305 LSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKM 357
+ L +LS+ + + G+ LK L L+G +T+DA+ Q +
Sbjct: 236 IKDCKNLASLSLEQSAVGVDGMKVIGGLSKLKELKLYGASNVTDDALAQIAGL 288
>gi|8927653|gb|AAF82144.1|AC034256_8 Contains similarity to F-box protein FBL2 from Homo sapiens
gb|AF176518 and contains multiple Leucine Rich PF|00560
repeats. ESTs gb|Z34572, gb|Z34571, gb|AI100681,
gb|AI100675, gb|AA395320, gb|AI100674, gb|AA651378,
gb|AA007067, gb|T46145, gb|T22090, gb|AI995016,
gb|H36884, gb|AI995066, gb|H37061, gb|T43537 come from
this gene [Arabidopsis thaliana]
Length = 568
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 133/277 (48%), Gaps = 19/277 (6%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N + ++L +D + +L A L SLN+ C +T + + L+G+ L L+L C
Sbjct: 213 NLKKLDLEKCPGIDG-GLVHLRALTKLESLNIKWCNCITDADMEPLSGLNKLNLLNLEGC 271
Query: 126 VKVTDAGM-------KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTD 178
VT A + +H +++ L L L+ + G S L NL +L+LG +T+
Sbjct: 272 RHVTAACLDTLTGLYRHPHALAGLMYLNLNRCNFSDSGCEKFSDLINLKILNLGMNNITN 331
Query: 179 LVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSL 233
L L+ LTKLE L+L ++ + G L L L L+ T G+ L +S+L
Sbjct: 332 SCLVHLKGLTKLESLNLDSCRIGDEGLVHLSGMLELKSLELSDTEVGSNGLRHLSGLSNL 391
Query: 234 ECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 293
E +NLSF + L L L L LNL+ V+DA L L++ L HL L
Sbjct: 392 ESINLSFTVVTDS------GLRKLSGLTSLRTLNLDARHVTDAGLSALTSLTGLTHLDLF 445
Query: 294 NASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 330
A +TD + L +L KL +L I LT++G+ + K
Sbjct: 446 GARITDSGTNHLRNLKKLQSLEICGGGLTDTGVKNIK 482
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 141/313 (45%), Gaps = 35/313 (11%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N E++ + + + +L L SL+ +T+ + AL+ + LK+LDL +C
Sbjct: 163 NLESLNFNFCDQISNRGLVHLSGLSNLTSLSFRRNAAITAQGMRALSNLVNLKKLDLEKC 222
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADG-IALLSSLQNLSVLDLGGL-PVTDLVLRS 183
+ D G+ HL +++ LE L + D + LS L L++L+L G VT L +
Sbjct: 223 PGI-DGGLVHLRALTKLESLNIKWCNCITDADMEPLSGLNKLNLLNLEGCRHVTAACLDT 281
Query: 184 L-------QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNIS 231
L L L YL+L S+ G L LNL +T L ++
Sbjct: 282 LTGLYRHPHALAGLMYLNLNRCNFSDSGCEKFSDLINLKILNLGMNNITNSCLVHLKGLT 341
Query: 232 SLECLNLSFIQQVGAETDLVLS-------------------LTALQNLNHLERLNLEQTQ 272
LE LNL ++G E + LS L L L++LE +NL T
Sbjct: 342 KLESLNLDSC-RIGDEGLVHLSGMLELKSLELSDTEVGSNGLRHLSGLSNLESINLSFTV 400
Query: 273 VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPP 332
V+D+ L LS L L+L +TD L L+SL+ LT+L + A +T+SG +
Sbjct: 401 VTDSGLRKLSGLTSLRTLNLDARHVTDAGLSALTSLTGLTHLDLFGARITDSGTNHLRNL 460
Query: 333 RSLKLLDLHGGWL 345
+ L+ L++ GG L
Sbjct: 461 KKLQSLEICGGGL 473
>gi|356562920|ref|XP_003549716.1| PREDICTED: F-box/LRR-repeat protein 14-like [Glycine max]
Length = 580
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 151/328 (46%), Gaps = 39/328 (11%)
Query: 55 IFPSLLEVFKH--NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALT 112
+ P + F + N E ++L + + ++ +L + L LN+ C+ V S + +++
Sbjct: 196 VKPDGMRAFSNLFNLEKLDLERCSDIHGGFV-HLKGLKKLEYLNIGCCKCVMDSDMKSIS 254
Query: 113 GMTCLKELDLSRCVKVTDAGMKHLL------------------------SISTLEKLWLS 148
+ LKEL +S +TD G+ +L ++++L L L+
Sbjct: 255 ELINLKELQISN-SSITDIGITYLRGLKMLTTLNVEGCNITAACLEFIHALASLACLNLN 313
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
GL+ DG +S L+NL L L +TD L L+ LT LEYL+L ++ + G A L
Sbjct: 314 RCGLSDDGFEKISGLKNLKRLSLAFNRITDACLVHLKGLTNLEYLNLDYCRIGDDGLANL 373
Query: 209 KMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHL 263
L L L+ T G+ + + LE LNLSF TD L L L L
Sbjct: 374 TGLTLLKSLVLSDTDIGNSGLRHISGLKKLEDLNLSFT----TVTD--HGLKRLSGLTQL 427
Query: 264 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
+ LNL+ Q++DA L L++ LI L L A ++D L S L +L I LT+
Sbjct: 428 KSLNLDARQITDAGLANLTSLSGLIALDLFGARISDNGTTFLRSFKILQSLEICGGGLTD 487
Query: 324 SGLGSFKPPRSLKLLDLHGGWLLTEDAI 351
+G+ + + SL L+L LT+ +
Sbjct: 488 AGVKNIREIVSLTQLNLSQNCNLTDKTL 515
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 116/237 (48%), Gaps = 12/237 (5%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + + +L L LN+ CR + L LTG+T LK L LS + ++G++H
Sbjct: 339 NRITDACLVHLKGLTNLEYLNLDYCR-IGDDGLANLTGLTLLKSLVLSD-TDIGNSGLRH 396
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ + LE L LS T +T G+ LS L L L+L +TD L +L L+ L LDL
Sbjct: 397 ISGLKKLEDLNLSFTTVTDHGLKRLSGLTQLKSLNLDARQITDAGLANLTSLSGLIALDL 456
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSFIQQVGAETDL 250
+G+++S+ G L+ F L L + G+T + I SL LNLS Q TD
Sbjct: 457 FGARISDNGTTFLRSFKILQSLEICGGGLTDAGVKNIREIVSLTQLNLS---QNCNLTDK 513
Query: 251 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 307
L L + + L LN+ +++++ L L K L L+L + +T + +L S
Sbjct: 514 TLEL--ISGMTALRSLNVSNSRITNEGLRYLKPLKNLRTLTLESCKVTASEIKKLQS 568
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 143/328 (43%), Gaps = 49/328 (14%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N +A+ L + + ++ L SL++ V + A + + L++LDL RC
Sbjct: 159 NLQALTLNFCDQFSEYGLKHISGLSNLTSLSIRKSSTVKPDGMRAFSNLFNLEKLDLERC 218
Query: 126 VK------------------------VTDAGMKHLLSISTLEKLWLSETGLTADGIALLS 161
V D+ MK + + L++L +S + +T GI L
Sbjct: 219 SDIHGGFVHLKGLKKLEYLNIGCCKCVMDSDMKSISELINLKELQISNSSITDIGITYLR 278
Query: 162 SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW 221
L+ L+ L++ G +T L + L L L+L +S+ G + L L+LA+
Sbjct: 279 GLKMLTTLNVEGCNITAACLEFIHALASLACLNLNRCGLSDDGFEKISGLKNLKRLSLAF 338
Query: 222 TGVTK-----LPNISSLECLNLSFIQQVGAE-----------TDLVLSLTALQN------ 259
+T L +++LE LNL + ++G + LVLS T + N
Sbjct: 339 NRITDACLVHLKGLTNLEYLNLDYC-RIGDDGLANLTGLTLLKSLVLSDTDIGNSGLRHI 397
Query: 260 --LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 317
L LE LNL T V+D L LS +L L+L +TD L L+SLS L L +
Sbjct: 398 SGLKKLEDLNLSFTTVTDHGLKRLSGLTQLKSLNLDARQITDAGLANLTSLSGLIALDLF 457
Query: 318 DAVLTNSGLGSFKPPRSLKLLDLHGGWL 345
A ++++G + + L+ L++ GG L
Sbjct: 458 GARISDNGTTFLRSFKILQSLEICGGGL 485
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 156/364 (42%), Gaps = 45/364 (12%)
Query: 9 LVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNA- 67
L+ LCI + E K+ S LP ++ + L+ + LE F+ A
Sbjct: 58 LMDLCIN---KMREDFHKYN----SFSILPRDISQQIFNELVDSHCLTQLSLEAFRDCAL 110
Query: 68 EAIELRGENSVDAEWMAYL-------------------GAFRYLR------SLNVADCRR 102
+ I+L V +WM + R+L+ +L + C +
Sbjct: 111 QDIDLGEYVGVSDDWMDVISSQGLSLLSVDVSGSQVTDNGLRFLKDCSNLQALTLNFCDQ 170
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
+ L ++G++ L L + + V GM+ ++ LEKL L G L
Sbjct: 171 FSEYGLKHISGLSNLTSLSIRKSSTVKPDGMRAFSNLFNLEKLDLERCSDIHGGFVHLKG 230
Query: 163 LQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW 221
L+ L L++G V D ++S+ L L+ L + S +++ G L+ L+ LN+
Sbjct: 231 LKKLEYLNIGCCKCVMDSDMKSISELINLKELQISNSSITDIGITYLRGLKMLTTLNVEG 290
Query: 222 TGVTK-----LPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDA 276
+T + ++SL CLNL+ + G D ++ L+N L+RL+L +++DA
Sbjct: 291 CNITAACLEFIHALASLACLNLN---RCGLSDDGFEKISGLKN---LKRLSLAFNRITDA 344
Query: 277 TLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLK 336
L L L +L+L + D L L+ L+ L +L + D + NSGL + L+
Sbjct: 345 CLVHLKGLTNLEYLNLDYCRIGDDGLANLTGLTLLKSLVLSDTDIGNSGLRHISGLKKLE 404
Query: 337 LLDL 340
L+L
Sbjct: 405 DLNL 408
>gi|46447250|ref|YP_008615.1| hypothetical protein pc1616 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400891|emb|CAF24340.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 813
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 98/301 (32%), Positives = 146/301 (48%), Gaps = 24/301 (7%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ ++L ++ + +A+L LR L ++DCR +T + L LT + L+ LDLS C
Sbjct: 431 QHLDLSKSENLTGDGLAHLTPLVALRHLGLSDCRNLTDAGLAHLTPLVALRHLDLSECKN 490
Query: 128 VTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG-----GLPVTDLVL 181
+TD G+ HL S+ L+ L L LT G+A L+ L L LDLG +TD L
Sbjct: 491 LTDDGLVHLSSLVALQYLSLKLCENLTDAGLAHLTPLTTLEHLDLGLDLGCCHNLTDDGL 550
Query: 182 RSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAWT------GVTKLPNISSLE 234
L LT L++LDL W +++ G A L L L+L+W G+ L + +L+
Sbjct: 551 AHLSSLTALKHLDLSWRENLTDAGLAHLTPLTALRHLDLSWCENLTDEGLAYLTPLVALQ 610
Query: 235 CLNL--SFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL 292
L+L S I G E L L L HL LN + +++ L L++ L HL L
Sbjct: 611 YLSLKGSDITDEGLE-----HLAHLSALRHLS-LN-DCRRINGYGLAHLTSLVNLEHLDL 663
Query: 293 RNA-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 350
L L LSSL L +L++ + L + GL P +L+ LDL G LT+
Sbjct: 664 SGCYHLPSFQLIYLSSLVNLQHLNLSECFGLCHDGLEDLTPLMNLQYLDLSGCINLTDQG 723
Query: 351 I 351
+
Sbjct: 724 L 724
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 142/299 (47%), Gaps = 39/299 (13%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+A+L + L+ L++++C + + L L+ +T L+ LDLS TDAG+ HL + +L
Sbjct: 371 LAHLTSLTALQHLDLSECYLLKDTGLAHLSSLTALQYLDLSDSGNFTDAGLAHLTPLVSL 430
Query: 143 EKLWLSET-GLTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDLWGSQ- 199
+ L LS++ LT DG+A L+ L L L L +TD L L L L +LDL +
Sbjct: 431 QHLDLSKSENLTGDGLAHLTPLVALRHLGLSDCRNLTDAGLAHLTPLVALRHLDLSECKN 490
Query: 200 VSNRGAAVLKMFPRLSFL------NLAWTGVTKLPNISSLECLNLSFIQQVGAETDL--- 250
+++ G L L +L NL G+ L +++LE L+L +G +L
Sbjct: 491 LTDDGLVHLSSLVALQYLSLKLCENLTDAGLAHLTPLTTLEHLDLGL--DLGCCHNLTDD 548
Query: 251 ----VLSLTALQNLNHLERLNLEQT--------------------QVSDATLFPLSTFKE 286
+ SLTAL++L+ R NL ++D L L+
Sbjct: 549 GLAHLSSLTALKHLDLSWRENLTDAGLAHLTPLTALRHLDLSWCENLTDEGLAYLTPLVA 608
Query: 287 LIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS-GLGSFKPPRSLKLLDLHGGW 344
L +LSL+ + +TD L L+ LS L +LS+ D N GL +L+ LDL G +
Sbjct: 609 LQYLSLKGSDITDEGLEHLAHLSALRHLSLNDCRRINGYGLAHLTSLVNLEHLDLSGCY 667
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 153/308 (49%), Gaps = 28/308 (9%)
Query: 36 RLPAHLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSL 95
+L +L D+ L HL L +H ++L +++ + +A+L + L+ L
Sbjct: 511 KLCENLTDAGLAHLTP--------LTTLEHLDLGLDLGCCHNLTDDGLAHLSSLTALKHL 562
Query: 96 NVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTAD 155
+++ +T + L LT +T L+ LDLS C +TD G+ +L + L+ L L + +T +
Sbjct: 563 DLSWRENLTDAGLAHLTPLTALRHLDLSWCENLTDEGLAYLTPLVALQYLSLKGSDITDE 622
Query: 156 G---IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS-QVSNRGAAVLKMF 211
G +A LS+L++LS+ D + L L L LE+LDL G + + L
Sbjct: 623 GLEHLAHLSALRHLSLNDCR--RINGYGLAHLTSLVNLEHLDLSGCYHLPSFQLIYLSSL 680
Query: 212 PRLSFLNLA------WTGVTKLPNISSLECLNLSFIQQVGAETDLVLS-LTALQNLNHLE 264
L LNL+ G+ L + +L+ L+LS + TD L+ LT+L L+ L+
Sbjct: 681 VNLQHLNLSECFGLCHDGLEDLTPLMNLQYLDLSGCINL---TDQGLAYLTSLVGLD-LQ 736
Query: 265 RLNLEQT-QVSDATLFPLSTFKELIHLSLRN-ASLTDVSLHQLSSLSKLTNLSIRDAV-L 321
L+L +++D L L++ L HL+L +LTD L L SL L L +R+ +
Sbjct: 737 HLDLSGCKKITDTGLAHLTSLVTLQHLNLSECVNLTDTGLAHLVSLVNLQYLELRECKNI 796
Query: 322 TNSGLGSF 329
T++GL +
Sbjct: 797 TDAGLAHY 804
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 124/265 (46%), Gaps = 21/265 (7%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
+ LN++ T + AL LK L L D G+ HL S++ L+ L LSE
Sbjct: 330 IEGLNLSGKDFFTEAHFLALKNCKNLKVLCLKIFYTPIDTGLAHLTSLTALQHLDLSECY 389
Query: 152 LTAD-GIALLSSLQNLSVLDLG-GLPVTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVL 208
L D G+A LSSL L LDL TD L L L L++LDL S+ ++ G A L
Sbjct: 390 LLKDTGLAHLSSLTALQYLDLSDSGNFTDAGLAHLTPLVSLQHLDLSKSENLTGDGLAHL 449
Query: 209 KMFPRLSFL------NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNH 262
L L NL G+ L + +L L+LS + + + L L +L
Sbjct: 450 TPLVALRHLGLSDCRNLTDAGLAHLTPLVALRHLDLSECKNLTDD-----GLVHLSSLVA 504
Query: 263 LERLNLEQTQ-VSDATLFPLSTFKELIHLSLR-----NASLTDVSLHQLSSLSKLTNLSI 316
L+ L+L+ + ++DA L L+ L HL L +LTD L LSSL+ L +L +
Sbjct: 505 LQYLSLKLCENLTDAGLAHLTPLTTLEHLDLGLDLGCCHNLTDDGLAHLSSLTALKHLDL 564
Query: 317 R-DAVLTNSGLGSFKPPRSLKLLDL 340
LT++GL P +L+ LDL
Sbjct: 565 SWRENLTDAGLAHLTPLTALRHLDL 589
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 39/70 (55%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ ++L G + +A+L + L+ LN+++C +T + L L + L+ L+L C
Sbjct: 736 QHLDLSGCKKITDTGLAHLTSLVTLQHLNLSECVNLTDTGLAHLVSLVNLQYLELRECKN 795
Query: 128 VTDAGMKHLL 137
+TDAG+ H +
Sbjct: 796 ITDAGLAHYI 805
>gi|297844484|ref|XP_002890123.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297335965|gb|EFH66382.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 578
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 129/268 (48%), Gaps = 12/268 (4%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
E++ ++ N + M L LRSL + C R+T + L G+ L L+L C
Sbjct: 232 ESLNIKWCNCITDADMEPLSELTNLRSLQIC-CSRITDIGISYLKGLNKLNLLNLEGCRH 290
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
VT A + L +++ L L L+ + G S L NL +L+LG +T+ L L+ L
Sbjct: 291 VTAACLDTLTALTGLMFLNLNRCNFSDSGCEKFSDLINLKILNLGMNSITNSCLVHLRGL 350
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSFIQ 242
TKLE L+L ++ + G L L L L+ T G+ L +S+LE +NLSF
Sbjct: 351 TKLESLNLDSCRIGDEGLVHLSGMLELKSLELSDTEVGSNGLRHLSGLSNLESINLSFTV 410
Query: 243 QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 302
+ L L L L LNL+ V+DA L L++ L HL L A +TD
Sbjct: 411 VTDS------GLRKLSGLTSLRTLNLDARHVTDAGLSALTSLTGLTHLDLFGARITDSGT 464
Query: 303 HQLSSLSKLTNLSIRDAVLTNSGLGSFK 330
+ L +L KL +L I LT++G+ + K
Sbjct: 465 NHLRNLKKLQSLEICGGGLTDTGVKNIK 492
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 132/303 (43%), Gaps = 38/303 (12%)
Query: 69 AIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV 128
+++ G + D+ ++ G L SLN C ++++ L L+G++ L L R +
Sbjct: 135 SVDFSGSDITDSGLVSLKGCTN-LESLNFNFCDQISNRGLEHLSGLSNLTSLSFRRNAAI 193
Query: 129 TDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVL 187
T GM+ L ++ ++KL L + G+ L L L L++ +TD + L L
Sbjct: 194 TAQGMRALSNLVNMKKLDLEKCPGIHGGLVHLRGLTKLESLNIKWCNCITDADMEPLSEL 253
Query: 188 TKLEYLDLWGSQVSNRG----------------------AAVLK--------MFPRLSFL 217
T L L + S++++ G AA L MF L+
Sbjct: 254 TNLRSLQICCSRITDIGISYLKGLNKLNLLNLEGCRHVTAACLDTLTALTGLMFLNLNRC 313
Query: 218 NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDAT 277
N + +G K ++ +L+ LNL + L L+ L LE LNL+ ++ D
Sbjct: 314 NFSDSGCEKFSDLINLKILNLGMNSITNS------CLVHLRGLTKLESLNLDSCRIGDEG 367
Query: 278 LFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKL 337
L LS EL L L + + L LS LS L ++++ V+T+SGL SL+
Sbjct: 368 LVHLSGMLELKSLELSDTEVGSNGLRHLSGLSNLESINLSFTVVTDSGLRKLSGLTSLRT 427
Query: 338 LDL 340
L+L
Sbjct: 428 LNL 430
>gi|46445833|ref|YP_007198.1| F-box protein [Candidatus Protochlamydia amoebophila UWE25]
gi|46399474|emb|CAF22923.1| putative F-box protein [Candidatus Protochlamydia amoebophila
UWE25]
Length = 337
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 99/285 (34%), Positives = 148/285 (51%), Gaps = 18/285 (6%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ +EL DA +A+L + L+ LN++ C +T + L LT +T L+ L+LS C K
Sbjct: 8 QHLELGCCKLTDA-GLAHLKSLVALQHLNLSWCDNLTDTGLAHLTPLTALQHLNLSVCGK 66
Query: 128 VTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQ 185
+T AG+ HL + LE L LS+ G LT G+A L+ L L L + G +TD+ L L+
Sbjct: 67 LTGAGLAHLTPLVALENLDLSQCGKLTDAGLAHLTPLVALQHLGMRGCRKLTDVGLAHLR 126
Query: 186 VLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWT------GVTKLPNISSLECLNL 238
L L++LDL G S +++ G A L+ L LNL G+ L + +L+ L+L
Sbjct: 127 PLVALQHLDLDGCSNLTDAGLAHLRPLVALQHLNLKRCDNLTDIGLAHLRPLVALQHLDL 186
Query: 239 SFIQQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHLSLRNAS- 296
+ TD L L L L+ LNL + +DA L L+ L +L+L + S
Sbjct: 187 DGCNNL---TD--AGLAHLTPLVALQHLNLRGCFKFTDAGLAHLTPLVALQYLNLSDCSN 241
Query: 297 LTDVSLHQLSSLSKLTNLSIR-DAVLTNSGLGSFKPPRSLKLLDL 340
LTD L L SL L +L++ + LT +GL P +L+ LDL
Sbjct: 242 LTDAGLAHLKSLVALQHLNLSWCSKLTGAGLAHLTPLVALEDLDL 286
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 117/236 (49%), Gaps = 15/236 (6%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ + +RG + +A+L L+ L++ C +T + L L + L+ L+L RC
Sbjct: 107 QHLGMRGCRKLTDVGLAHLRPLVALQHLDLDGCSNLTDAGLAHLRPLVALQHLNLKRCDN 166
Query: 128 VTDAGMKHLLSISTLEKLWLSE-TGLTADGIALLSSLQNLSVLDL-GGLPVTDLVLRSLQ 185
+TD G+ HL + L+ L L LT G+A L+ L L L+L G TD L L
Sbjct: 167 LTDIGLAHLRPLVALQHLDLDGCNNLTDAGLAHLTPLVALQHLNLRGCFKFTDAGLAHLT 226
Query: 186 VLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNL 238
L L+YL+L S +++ G A LK L LNL+W G+ L + +LE L+L
Sbjct: 227 PLVALQYLNLSDCSNLTDAGLAHLKSLVALQHLNLSWCSKLTGAGLAHLTPLVALEDLDL 286
Query: 239 SFIQQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHLSLR 293
S Q G TD L+ AL + LNLE+ +++DA L T I+L+L+
Sbjct: 287 S---QCGKLTDAGLAHLALLTAL--QYLNLERCRKLTDAGLAHFKTLAASIYLNLQ 337
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 119/262 (45%), Gaps = 29/262 (11%)
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSF 240
L L++L+L ++++ G A LK L LNL+W TG+ L +++L+ LNLS
Sbjct: 4 LVALQHLELGCCKLTDAGLAHLKSLVALQHLNLSWCDNLTDTGLAHLTPLTALQHLNLSV 63
Query: 241 IQQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHLSLRNA-SLT 298
++ L L L LE L+L Q +++DA L L+ L HL +R LT
Sbjct: 64 CGKLTGA-----GLAHLTPLVALENLDLSQCGKLTDAGLAHLTPLVALQHLGMRGCRKLT 118
Query: 299 DVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKM 357
DV L L L L +L + LT++GL +P +L+ L+L LT+ + +
Sbjct: 119 DVGLAHLRPLVALQHLDLDGCSNLTDAGLAHLRPLVALQHLNLKRCDNLTD---IGLAHL 175
Query: 358 HPRIEVWHELSVICPSDQIGSNGPSPSRTSLRASLVKQKQDPMPMSHSFLDQRLKYSREE 417
P + + H D G N + + + LV + + F D L +
Sbjct: 176 RPLVALQHL-------DLDGCNNLTDAGLAHLTPLVALQHLNLRGCFKFTDAGLAH-LTP 227
Query: 418 LLELQYSSLSLARPDDSSTQDA 439
L+ LQY +LS D S+ DA
Sbjct: 228 LVALQYLNLS----DCSNLTDA 245
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 94/194 (48%), Gaps = 17/194 (8%)
Query: 169 LDLGGLPVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLA------W 221
L+LG +TD L L+ L L++L+L W +++ G A L L LNL+
Sbjct: 10 LELGCCKLTDAGLAHLKSLVALQHLNLSWCDNLTDTGLAHLTPLTALQHLNLSVCGKLTG 69
Query: 222 TGVTKLPNISSLECLNLSFIQQVGAETDLVLS-LTALQNLNHLERLNLEQ-TQVSDATLF 279
G+ L + +LE L+LS Q G TD L+ LT L L HL + T V A L
Sbjct: 70 AGLAHLTPLVALENLDLS---QCGKLTDAGLAHLTPLVALQHLGMRGCRKLTDVGLAHLR 126
Query: 280 PLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSI-RDAVLTNSGLGSFKPPRSLKL 337
PL + HL L S LTD L L L L +L++ R LT+ GL +P +L+
Sbjct: 127 PLVALQ---HLDLDGCSNLTDAGLAHLRPLVALQHLNLKRCDNLTDIGLAHLRPLVALQH 183
Query: 338 LDLHGGWLLTEDAI 351
LDL G LT+ +
Sbjct: 184 LDLDGCNNLTDAGL 197
>gi|384254255|gb|EIE27729.1| RNI-like protein, partial [Coccomyxa subellipsoidea C-169]
Length = 515
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 128/268 (47%), Gaps = 27/268 (10%)
Query: 106 SALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQN 165
S WA GM L+ LDLS C +TDA +K L +++ + L LS T + GI L S+
Sbjct: 160 SGAWA--GMKQLENLDLSWCSGITDADVKALAALTAITGLQLSRTLVADSGIFALRSMSR 217
Query: 166 LSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL----- 219
L L L G +++ + S+ LT LE L+L VS +G + L L LN+
Sbjct: 218 LRCLGLAGCSGISNGAVGSVSALTSLEELNLEWCTVSVKGLSHLSTLTELRSLNVAYTTA 277
Query: 220 ------AWTGVTKLPNISSLEC----LNLSFIQQVGAETDLVLSLTALQN--------LN 261
AWT +T L ++ C L I ++ D+ LS TA+ + L
Sbjct: 278 GDNALAAWTSLTNLRTLNLDSCPVSDRGLHHISELTNLEDVNLSDTAITDQGMIAFAPLK 337
Query: 262 HLERLNLEQTQ-VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV 320
++RLNL T V D L ++ L L L S TDV L ++ L++L L + A
Sbjct: 338 GMQRLNLSYTAGVGDLGLAAVARLTALTELHLDGRSFTDVGLRTIAPLTQLQTLDLFGAR 397
Query: 321 LTNSGLGSFKPPRSLKLLDLHGGWLLTE 348
+T++G +P R L+ L++ GG + E
Sbjct: 398 ITDAGCVHLRPFRRLERLEICGGGISDE 425
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 138/276 (50%), Gaps = 35/276 (12%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
LR L +A C +++ A+ +++ +T L+EL+L C V+ G+ HL +++ L L ++ T
Sbjct: 218 LRCLGLAGCSGISNGAVGSVSALTSLEELNLEWCT-VSVKGLSHLSTLTELRSLNVAYTT 276
Query: 152 LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF 211
+ +A +SL NL L+L PV+D L + LT LE ++L + ++++G
Sbjct: 277 AGDNALAAWTSLTNLRTLNLDSCPVSDRGLHHISELTNLEDVNLSDTAITDQGMIAFAPL 336
Query: 212 PRLSFLNLAWT------GVTKLPNISSLECLNL---SFIQQVGAETDLVLSLTALQNLN- 261
+ LNL++T G+ + +++L L+L SF VG T + LT LQ L+
Sbjct: 337 KGMQRLNLSYTAGVGDLGLAAVARLTALTELHLDGRSFTD-VGLRT--IAPLTQLQTLDL 393
Query: 262 -----------------HLERLNLEQTQVSDATLFPLSTFKELIHLSL-RNASLTDVSLH 303
LERL + +SD + L L HLSL +NA +TD +
Sbjct: 394 FGARITDAGCVHLRPFRRLERLEICGGGISDEGVKELIWLTGLQHLSLAQNARITDRASL 453
Query: 304 QLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 339
LS LS+L L++ LT +G+ P RSL L+
Sbjct: 454 FLSGLSQLRGLNLTGTQLTGNGI---LPLRSLTNLE 486
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 122/247 (49%), Gaps = 37/247 (14%)
Query: 77 SVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHL 136
+V + +++L LRSLNVA +AL A T +T L+ L+L C V+D G+ H+
Sbjct: 252 TVSVKGLSHLSTLTELRSLNVA-YTTAGDNALAAWTSLTNLRTLNLDSC-PVSDRGLHHI 309
Query: 137 LSISTLEKLWLSETGLTADGIALLSSLQNL---------SVLDLG--------------- 172
++ LE + LS+T +T G+ + L+ + V DLG
Sbjct: 310 SELTNLEDVNLSDTAITDQGMIAFAPLKGMQRLNLSYTAGVGDLGLAAVARLTALTELHL 369
Query: 173 -GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----K 226
G TD+ LR++ LT+L+ LDL+G+++++ G L+ F RL L + G++ +
Sbjct: 370 DGRSFTDVGLRTIAPLTQLQTLDLFGARITDAGCVHLRPFRRLERLEICGGGISDEGVKE 429
Query: 227 LPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 286
L ++ L+ L+L+ ++ L LS L+ L LNL TQ++ + PL +
Sbjct: 430 LIWLTGLQHLSLAQNARITDRASLFLS-----GLSQLRGLNLTGTQLTGNGILPLRSLTN 484
Query: 287 LIHLSLR 293
L L L+
Sbjct: 485 LESLCLK 491
>gi|168012567|ref|XP_001758973.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689672|gb|EDQ76042.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 584
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 132/280 (47%), Gaps = 11/280 (3%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+ +L L+ L ++ +V+ S L +LTG+T L+ L + C VT GM+ + ++ +
Sbjct: 252 IKHLSGLVNLKELQISR-SKVSDSGLASLTGLTKLRSLSMEGCQAVTSKGMESIGGLTGV 310
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
L ++ L G L L NL L++G V++ + L+ LT LE L+L ++ +
Sbjct: 311 WHLNVNSCFLHDSGFQKLEGLINLRTLNMGYNNVSNSGMGFLKGLTNLERLNLDSCKIGD 370
Query: 203 RGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSFIQQVGAETDLVLSLTAL 257
G +K L L+L+ T G+ L + +LE LNLSF + L +
Sbjct: 371 HGIENVKGLVNLKMLDLSDTEIESAGLRFLTGLKNLESLNLSFTGGIADS-----GLRTI 425
Query: 258 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 317
+ L LNL+ Q++D L L+ L L L A +TD + L KL L +
Sbjct: 426 ATITSLTSLNLDSKQITDTGLAALTGLTGLKTLDLFGARITDYGMACLRHFKKLQTLELC 485
Query: 318 DAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKM 357
+T++G+ S K SL L+L LT++++ M
Sbjct: 486 GGGITDAGVRSIKDLTSLTSLNLSQNMRLTDNSLQYLSGM 525
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 124/269 (46%), Gaps = 51/269 (18%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N+V M +L L LN+ C+ + + + G+ LK LDLS ++ AG+
Sbjct: 340 GYNNVSNSGMGFLKGLTNLERLNLDSCK-IGDHGIENVKGLVNLKMLDLSD-TEIESAGL 397
Query: 134 KHLLSISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 192
+ L + LE L LS TG AD G+ ++++ +L+ L+L +TD L +L LT L+
Sbjct: 398 RFLTGLKNLESLNLSFTGGIADSGLRTIATITSLTSLNLDSKQITDTGLAALTGLTGLKT 457
Query: 193 LDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVL 252
LDL+G+++++ G A L+ F +L L L G+T
Sbjct: 458 LDLFGARITDYGMACLRHFKKLQTLELCGGGITDA------------------------- 492
Query: 253 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 312
+ ++++L L LNL Q N LTD SL LS + L
Sbjct: 493 GVRSIKDLTSLTSLNLSQ-----------------------NMRLTDNSLQYLSGMKNLV 529
Query: 313 NLSIRDAVLTNSGLGSFKPPRSLKLLDLH 341
+L++ ++ +TN+GL +P +L L L
Sbjct: 530 SLNLANSRVTNAGLQHLRPLTNLTSLALQ 558
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 142/308 (46%), Gaps = 32/308 (10%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N + LR N + A M L++L++ C + ++ L G+T L++L++ C
Sbjct: 186 NLTTLSLRSNNMITAAGMQNFTHLVSLKNLDLQRCPSIQGGFVY-LKGLTTLEKLNVGWC 244
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDL-------------- 171
+ V ++ +KHL + L++L +S + ++ G+A L+ L L L +
Sbjct: 245 IGVRNSDIKHLSGLVNLKELQISRSKVSDSGLASLTGLTKLRSLSMEGCQAVTSKGMESI 304
Query: 172 GGLP-----------VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL- 219
GGL + D + L+ L L L++ + VSN G LK L LNL
Sbjct: 305 GGLTGVWHLNVNSCFLHDSGFQKLEGLINLRTLNMGYNNVSNSGMGFLKGLTNLERLNLD 364
Query: 220 -AWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDAT 277
G + N+ L L + + E+ + LT L+N LE LNL T ++D+
Sbjct: 365 SCKIGDHGIENVKGLVNLKMLDLSDTEIESAGLRFLTGLKN---LESLNLSFTGGIADSG 421
Query: 278 LFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKL 337
L ++T L L+L + +TD L L+ L+ L L + A +T+ G+ + + L+
Sbjct: 422 LRTIATITSLTSLNLDSKQITDTGLAALTGLTGLKTLDLFGARITDYGMACLRHFKKLQT 481
Query: 338 LDLHGGWL 345
L+L GG +
Sbjct: 482 LELCGGGI 489
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 171/391 (43%), Gaps = 80/391 (20%)
Query: 30 QRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNA-----------------EAIEL 72
+ +SL R+P L +L L+RR+L+ P+ LE+F + + I
Sbjct: 74 KHKSLARVPRDLIQLVLDELVRRQLLSPTTLELFSDCSLQDVLLPDYPGVEDSWLQVIGS 133
Query: 73 RGEN---------SVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLS 123
+GE+ +V E +++L + L+SL + C + L +L+G++ L L L
Sbjct: 134 QGESLLALDISSSTVTDEGLSFLESCTNLQSLILNACESIADEGLTSLSGLSNLTTLSLR 193
Query: 124 RCVKVTDAGMK---HLLS---------------------ISTLEKL---WLSETGLTADG 156
+T AGM+ HL+S ++TLEKL W G+
Sbjct: 194 SNNMITAAGMQNFTHLVSLKNLDLQRCPSIQGGFVYLKGLTTLEKLNVGWC--IGVRNSD 251
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLS 215
I LS L NL L + V+D L SL LTKL L + G Q V+++G + +
Sbjct: 252 IKHLSGLVNLKELQISRSKVSDSGLASLTGLTKLRSLSMEGCQAVTSKGMESIGGLTGVW 311
Query: 216 FLN-----LAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLN--------- 261
LN L +G KL + +L LN+ + + + LT L+ LN
Sbjct: 312 HLNVNSCFLHDSGFQKLEGLINLRTLNMGYNNVSNSGMGFLKGLTNLERLNLDSCKIGDH 371
Query: 262 ---------HLERLNLEQTQVSDATLFPLSTFKELIHLSLR-NASLTDVSLHQLSSLSKL 311
+L+ L+L T++ A L L+ K L L+L + D L +++++ L
Sbjct: 372 GIENVKGLVNLKMLDLSDTEIESAGLRFLTGLKNLESLNLSFTGGIADSGLRTIATITSL 431
Query: 312 TNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 342
T+L++ +T++GL + LK LDL G
Sbjct: 432 TSLNLDSKQITDTGLAALTGLTGLKTLDLFG 462
>gi|46447552|ref|YP_008917.1| hypothetical protein pc1918 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401193|emb|CAF24642.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 552
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 143/299 (47%), Gaps = 21/299 (7%)
Query: 56 FPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMT 115
F ++ F + EA+ + + L L+ L++ C+ +T L L +T
Sbjct: 184 FEKIINHFSNEIEALNFSNNAHLTDAHLLTLKNCENLKVLHLEACQAITDDGLAHLAPLT 243
Query: 116 CLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADG----IALLSSLQNLSVLDL 171
L+ L+L+ C K+TDAG+ HL S++ L+ L LS D + L++LQNL++
Sbjct: 244 ALQHLNLNGCYKLTDAGLVHLKSLTALQTLDLSYCKNLKDAGLVHLKPLTALQNLALTSC 303
Query: 172 GGLPVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAWT------GV 224
L TD L L+ LT L+ LDL + + G A L L L+L++ G+
Sbjct: 304 KNL--TDRGLSHLKSLTALQTLDLSYCKNFKDAGLAHLPPLTALQTLDLSYCKDLTDRGL 361
Query: 225 TKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLST 283
+ L ++++L+ LNLS+ +++ L L+ L L+ L L + ++D L L +
Sbjct: 362 SHLKSLTALQTLNLSYCKKLKDA-----GLAHLKPLTALQYLALNSCKNLTDRGLSHLKS 416
Query: 284 FKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDL 340
L HL L +LTD L L L+ L L +R LT GL P +L+ LDL
Sbjct: 417 LMALQHLVLSGCDNLTDAGLAHLKPLTALQTLGLRRCQNLTGDGLAHLAPLTALQTLDL 475
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ + LR ++ + +A+L L++L+++ C+++ + L L +T L+ L L C
Sbjct: 446 QTLGLRRCQNLTGDGLAHLAPLTALQTLDLSYCKKLKDAGLAHLKPLTALQTLGLKWCSN 505
Query: 128 VTDAGMKHLLSISTLEKLWLSE-TGLTADGIA 158
+TDAG+ HL ++ L+ L LS LT G+A
Sbjct: 506 LTDAGLAHLKPLAALQHLDLSYCNNLTRAGLA 537
>gi|149174278|ref|ZP_01852905.1| serine/threonine protein kinase [Planctomyces maris DSM 8797]
gi|148846823|gb|EDL61159.1| serine/threonine protein kinase [Planctomyces maris DSM 8797]
Length = 1815
Score = 86.7 bits (213), Expect = 2e-14, Method: Composition-based stats.
Identities = 72/272 (26%), Positives = 126/272 (46%), Gaps = 13/272 (4%)
Query: 108 LWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLS 167
L L + LK L L ++D G+++L + LE+++L T +T +G+ L LQNL
Sbjct: 1547 LQRLAKLKTLKYLFLES-TSISDTGLQYLRQMQNLEEIFLDYTNITDEGLLHLRGLQNLR 1605
Query: 168 VLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW------ 221
VL L +T L L+ L +L +D+ + ++N G + +L+ LN+++
Sbjct: 1606 VLRLSKTKITGEGLGHLKDLPRLHTIDVNRAAITNSGMKAMGDLKQLTSLNISFNSQVDD 1665
Query: 222 TGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPL 281
TG+ + ++ LE L + ++ E L LQ + LE L L T ++ L L
Sbjct: 1666 TGLGYIEGLTKLEKLFAHLVPKITDE-----GLKHLQGMKQLESLTLSSTGITTTGLEQL 1720
Query: 282 STFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 341
+ + L L L N +TD L L L L +L + ++++GL + L+ LDL
Sbjct: 1721 TKHESLSKLDLTNCKITDSGLEHLQDLKNLRDLRLDLTPVSDAGLQHLYSLKKLENLDLR 1780
Query: 342 GGWLLTEDAILQFCKMHPRIEVWHELSVICPS 373
+T I K P+ ++ + P+
Sbjct: 1781 ET-KVTSQGIADLQKALPKCKIESDFKTKPPA 1811
Score = 76.3 bits (186), Expect = 3e-11, Method: Composition-based stats.
Identities = 53/143 (37%), Positives = 76/143 (53%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
M +G + L SLN++ +V + L + G+T L++L K+TD G+KHL + L
Sbjct: 1643 MKAMGDLKQLTSLNISFNSQVDDTGLGYIEGLTKLEKLFAHLVPKITDEGLKHLQGMKQL 1702
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
E L LS TG+T G+ L+ ++LS LDL +TD L LQ L L L L + VS+
Sbjct: 1703 ESLTLSSTGITTTGLEQLTKHESLSKLDLTNCKITDSGLEHLQDLKNLRDLRLDLTPVSD 1762
Query: 203 RGAAVLKMFPRLSFLNLAWTGVT 225
G L +L L+L T VT
Sbjct: 1763 AGLQHLYSLKKLENLDLRETKVT 1785
Score = 74.7 bits (182), Expect = 8e-11, Method: Composition-based stats.
Identities = 60/217 (27%), Positives = 105/217 (48%), Gaps = 11/217 (5%)
Query: 130 DAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK 189
D ++ L + TL+ L+L T ++ G+ L +QNL + L +TD L L+ L
Sbjct: 1544 DHDLQRLAKLKTLKYLFLESTSISDTGLQYLRQMQNLEEIFLDYTNITDEGLLHLRGLQN 1603
Query: 190 LEYLDLWGSQVSNRGAAVLKMFPRLSFLN-----LAWTGVTKLPNISSLECLNLSFIQQV 244
L L L ++++ G LK PRL ++ + +G+ + ++ L LN+SF QV
Sbjct: 1604 LRVLRLSKTKITGEGLGHLKDLPRLHTIDVNRAAITNSGMKAMGDLKQLTSLNISFNSQV 1663
Query: 245 GAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHLSLRNASLTDVSLH 303
L ++ L LE+L +++D L L K+L L+L + +T L
Sbjct: 1664 DDT-----GLGYIEGLTKLEKLFAHLVPKITDEGLKHLQGMKQLESLTLSSTGITTTGLE 1718
Query: 304 QLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
QL+ L+ L + + +T+SGL + ++L+ L L
Sbjct: 1719 QLTKHESLSKLDLTNCKITDSGLEHLQDLKNLRDLRL 1755
Score = 67.8 bits (164), Expect = 1e-08, Method: Composition-based stats.
Identities = 57/180 (31%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 166 LSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 225
++ LDL G V D L+ L L L L+L + VS+ G LK P L++++L T +T
Sbjct: 1262 INFLDLKGTSVKDDDLKRLAGLKTLPKLNLENTLVSDTGLQYLKDIP-LNYISLIGTQIT 1320
Query: 226 K-----LPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFP 280
L N+ SL L VG+ + L+++ LE+L+ TQ+ L
Sbjct: 1321 DKGFGYLSNMPSLTTL------YVGSTAISNSGVEQLKDMKQLEKLSFTNTQIDGVGLGH 1374
Query: 281 LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
L K L L L + S++DV L L L L L + + + +SGL K ++LK+L L
Sbjct: 1375 LKDLKNLKILGLESTSISDVDLQHLHGLKILIVLGLSNCKIADSGLAYLKDLKNLKVLSL 1434
Score = 62.8 bits (151), Expect = 3e-07, Method: Composition-based stats.
Identities = 63/250 (25%), Positives = 105/250 (42%), Gaps = 29/250 (11%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
V L L G+ L +L+L + V+D G+++L I L + L T +T G LS+
Sbjct: 1272 VKDDDLKRLAGLKTLPKLNLENTL-VSDTGLQYLKDIP-LNYISLIGTQITDKGFGYLSN 1329
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT 222
+ +L+ L +G +++ + L+ + +LE L +Q+ G LK L L L T
Sbjct: 1330 MPSLTTLYVGSTAISNSGVEQLKDMKQLEKLSFTNTQIDGVGLGHLKDLKNLKILGLEST 1389
Query: 223 GVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 282
++ + L L L L L L +++D+ L L
Sbjct: 1390 SISDV-------------------------DLQHLHGLKILIVLGLSNCKIADSGLAYLK 1424
Query: 283 TFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP--PRSLKLLDL 340
K L LSL + +TD L LS L L L ++ +T G+ S + P + D
Sbjct: 1425 DLKNLKVLSLDSTPITDEGLKHLSGLKMLQTLELQKTKVTPQGIASLQKALPNCKIVSDF 1484
Query: 341 HGGWLLTEDA 350
++T D+
Sbjct: 1485 ETKPIMTSDS 1494
Score = 61.6 bits (148), Expect = 7e-07, Method: Composition-based stats.
Identities = 76/307 (24%), Positives = 118/307 (38%), Gaps = 50/307 (16%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G ++ + L + L L+ + + + L L + LK L L ++D +
Sbjct: 1339 GSTAISNSGVEQLKDMKQLEKLSFTNTQ-IDGVGLGHLKDLKNLKILGLES-TSISDVDL 1396
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
+HL + L L LS + G+A L L+NL VL L P+TD L+ L L L+ L
Sbjct: 1397 QHLHGLKILIVLGLSNCKIADSGLAYLKDLKNLKVLSLDSTPITDEGLKHLSGLKMLQTL 1456
Query: 194 DLWGSQVSNRGAAVL-KMFPRLSFLN-------------------LAWTG---------- 223
+L ++V+ +G A L K P ++ W
Sbjct: 1457 ELQKTKVTPQGIASLQKALPNCKIVSDFETKPIMTSDSPMTDREIAEWVIGMGGGIGIGF 1516
Query: 224 -----VTKLPN----ISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVS 274
+ +LP +S+ N SF L L L L+ L LE T +S
Sbjct: 1517 KLNYKIEELPTEPVIFNSVSLKNASFEDH---------DLQRLAKLKTLKYLFLESTSIS 1567
Query: 275 DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRS 334
D L L + L + L ++TD L L L L L + +T GLG K
Sbjct: 1568 DTGLQYLRQMQNLEEIFLDYTNITDEGLLHLRGLQNLRVLRLSKTKITGEGLGHLKDLPR 1627
Query: 335 LKLLDLH 341
L +D++
Sbjct: 1628 LHTIDVN 1634
Score = 60.1 bits (144), Expect = 2e-06, Method: Composition-based stats.
Identities = 64/265 (24%), Positives = 115/265 (43%), Gaps = 31/265 (11%)
Query: 102 RVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLS 161
++T L+ M L L + ++++G++ L + LEKL + T + G+ L
Sbjct: 1318 QITDKGFGYLSNMPSLTTLYVGS-TAISNSGVEQLKDMKQLEKLSFTNTQIDGVGLGHLK 1376
Query: 162 SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW 221
L+NL +L L ++D+ L+ L L L L L ++++ G A LK L L+L
Sbjct: 1377 DLKNLKILGLESTSISDVDLQHLHGLKILIVLGLSNCKIADSGLAYLKDLKNLKVLSLDS 1436
Query: 222 TGVTK--LPNISSLECLNLSFIQQVGAETDLVLSL-TALQNLNHLERLNLEQTQVSDATL 278
T +T L ++S L+ L +Q+ + SL AL N + + SD+ +
Sbjct: 1437 TPITDEGLKHLSGLKMLQTLELQKTKVTPQGIASLQKALPNCKIVSDFETKPIMTSDSPM 1496
Query: 279 -------------------FPLSTFKELI--------HLSLRNASLTDVSLHQLSSLSKL 311
F L+ E + +SL+NAS D L +L+ L L
Sbjct: 1497 TDREIAEWVIGMGGGIGIGFKLNYKIEELPTEPVIFNSVSLKNASFEDHDLQRLAKLKTL 1556
Query: 312 TNLSIRDAVLTNSGLGSFKPPRSLK 336
L + ++++GL + ++L+
Sbjct: 1557 KYLFLESTSISDTGLQYLRQMQNLE 1581
>gi|357150116|ref|XP_003575347.1| PREDICTED: F-box/LRR-repeat protein 14-like [Brachypodium
distachyon]
Length = 582
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 141/303 (46%), Gaps = 24/303 (7%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N ++ + + V AE M L +L++ C ++ L L G+ L+ +++ C
Sbjct: 186 NLTSLSFKRSDGVTAEGMRVFANLVNLVNLDLERCLKI-HGGLVHLKGLRKLESINMRYC 244
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+TD+ +K+L ++ L++L LS +T G++ L L L L+L PVT L +
Sbjct: 245 NNITDSDIKYLSDLTNLKELQLSSCRITDLGVSYLRGLSKLIRLNLESCPVTAACLVDIS 304
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQ--- 242
L L L+L + + G K +L LNL + +T + E +NL F+
Sbjct: 305 GLASLMLLNLNRCGIYDEGCESFKDLKKLKVLNLGFNYITDACLVHLKELINLEFLNLDS 364
Query: 243 -QVG-----------AETDLVLS--------LTALQNLNHLERLNLEQTQVSDATLFPLS 282
+VG L LS L L L L+R++L T V+D + +S
Sbjct: 365 CKVGDAGLLHLKGLVLLKSLELSDTEVGSNGLRHLSGLRTLQRIDLSFTLVTDTGMKKIS 424
Query: 283 TFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 342
L ++L + +TDV L L+ L+ LT+L + A +T++G F+ ++L+ L+ G
Sbjct: 425 ALSSLKSVNLDSRLITDVGLAALTGLTGLTHLDLFGARITDNGASCFRYFKNLESLEACG 484
Query: 343 GWL 345
G +
Sbjct: 485 GSI 487
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 133/300 (44%), Gaps = 40/300 (13%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+ +L R L S+N+ C +T S + L+ +T LKEL LS C ++TD G+ +L +S L
Sbjct: 227 LVHLKGLRKLESINMRYCNNITDSDIKYLSDLTNLKELQLSSC-RITDLGVSYLRGLSKL 285
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
+L L +TA + +S L +L +L+L + D S + L KL+ L+L + +++
Sbjct: 286 IRLNLESCPVTAACLVDISGLASLMLLNLNRCGIYDEGCESFKDLKKLKVLNLGFNYITD 345
Query: 203 RGAAVLKMFPRLSFLNL-----------------------------AWTGVTKLPNISSL 233
LK L FLNL G+ L + +L
Sbjct: 346 ACLVHLKELINLEFLNLDSCKVGDAGLLHLKGLVLLKSLELSDTEVGSNGLRHLSGLRTL 405
Query: 234 ECLNLSF--IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 291
+ ++LSF + G + + L+ L+ +NL+ ++D L L+ L HL
Sbjct: 406 QRIDLSFTLVTDTG--------MKKISALSSLKSVNLDSRLITDVGLAALTGLTGLTHLD 457
Query: 292 LRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 351
L A +TD L +L +T+ G+ + K ++L LL+L LT+ +
Sbjct: 458 LFGARITDNGASCFRYFKNLESLEACGGSITDVGVKNIKELKALTLLNLSQNANLTDKTL 517
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 123/236 (52%), Gaps = 6/236 (2%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N + + +L L LN+ C+ V + L L G+ LK L+LS +V G+
Sbjct: 339 GFNYITDACLVHLKELINLEFLNLDSCK-VGDAGLLHLKGLVLLKSLELSD-TEVGSNGL 396
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
+HL + TL+++ LS T +T G+ +S+L +L ++L +TD+ L +L LT L +L
Sbjct: 397 RHLSGLRTLQRIDLSFTLVTDTGMKKISALSSLKSVNLDSRLITDVGLAALTGLTGLTHL 456
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK--LPNISSLECLNLSFIQQVGAETDLV 251
DL+G+++++ GA+ + F L L +T + NI L+ L L + Q TD
Sbjct: 457 DLFGARITDNGASCFRYFKNLESLEACGGSITDVGVKNIKELKALTLLNLSQNANLTDKT 516
Query: 252 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 307
L L + L L LN+ ++VS+A L L+ + L L+L + +T + +L +
Sbjct: 517 LEL--ISGLTALVSLNVSNSRVSNAGLRHLNALQNLRSLTLDSCRVTANEIRKLQA 570
>gi|168700559|ref|ZP_02732836.1| hypothetical protein GobsU_13597 [Gemmata obscuriglobus UQM 2246]
Length = 446
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 117/263 (44%), Gaps = 10/263 (3%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+A + F +LRS + DC RVT + L + LK + L VTD HL I TL
Sbjct: 119 LACIAGFEHLRSFGLRDCGRVTGAGFGVLAQLPRLKWVSL--VGPVTDEAGPHLGRIKTL 176
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
E + L T T G+ L++L L +++ PVT + ++L +D + +
Sbjct: 177 ETVVLYRTKFTDAGLKELAALPALGSVNVTATPVTGTAF-AEPGWSRLREIDATQTAFNA 235
Query: 203 RGAAVLKMFPRLSFLNLAWTGVTK--LPNISSLECLN-LSFIQQVGAETDLVLSLTALQN 259
G + P L L L T VT L +++ L LS A+T + AL
Sbjct: 236 AGLEAVSALPVLGTLTLDATAVTDSGLKHLARARALQELSLADTPVADT----GVAALAG 291
Query: 260 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 319
+ L LNLE+T V+ A EL L+L TD S L+ L LTNLS+
Sbjct: 292 VQTLRVLNLERTGVTGAAFATFPVPAELRKLNLAETRFTDASGSHLARLPALTNLSLSGC 351
Query: 320 VLTNSGLGSFKPPRSLKLLDLHG 342
+T++GL + L LDL G
Sbjct: 352 DVTDAGLARLADLKKLANLDLTG 374
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 96/221 (43%), Gaps = 26/221 (11%)
Query: 105 SSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQ 164
++ L A++ + L L L VTD+G+KHL L++L L++T + G+A L+ +Q
Sbjct: 235 AAGLEAVSALPVLGTLTLD-ATAVTDSGLKHLARARALQELSLADTPVADTGVAALAGVQ 293
Query: 165 NLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV 224
L VL+L VT + V +L L+L ++ ++ + L P L+ L+L+ V
Sbjct: 294 TLRVLNLERTGVTGAAFATFPVPAELRKLNLAETRFTDASGSHLARLPALTNLSLSGCDV 353
Query: 225 TKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTF 284
T L L +L L L+L T+ D T
Sbjct: 354 TD-------------------------AGLARLADLKKLANLDLTGTKAGDGAAEVAGTL 388
Query: 285 KELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 325
EL +S R LTD L + ++L L +R + +T G
Sbjct: 389 AELEVVSFRGTQLTDAGLKAAAHGARLRFLYVRGSKVTKRG 429
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 84/186 (45%), Gaps = 15/186 (8%)
Query: 41 LADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADC 100
+ DS L+HL R R + + + L + V +A L + LR LN+ +
Sbjct: 257 VTDSGLKHLARARAL------------QELSL-ADTPVADTGVAALAGVQTLRVLNL-ER 302
Query: 101 RRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALL 160
VT +A L++L+L+ + TDA HL + L L LS +T G+A L
Sbjct: 303 TGVTGAAFATFPVPAELRKLNLAE-TRFTDASGSHLARLPALTNLSLSGCDVTDAGLARL 361
Query: 161 SSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA 220
+ L+ L+ LDL G D L +LE + G+Q+++ G RL FL +
Sbjct: 362 ADLKKLANLDLTGTKAGDGAAEVAGTLAELEVVSFRGTQLTDAGLKAAAHGARLRFLYVR 421
Query: 221 WTGVTK 226
+ VTK
Sbjct: 422 GSKVTK 427
>gi|59802561|gb|AAX07517.1| putative regulatory subunit [Gemmata sp. Wa1-1]
Length = 402
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 120/235 (51%), Gaps = 14/235 (5%)
Query: 89 FRYLRSLNVADCRR--VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLW 146
R L L V D R VT + L L G+T L +S +VTDAG+K L ++ L +L
Sbjct: 138 MRSLSKLTVLDLGRTKVTDAGLQELRGLTNLTTW-ISAPHEVTDAGLKELSGLANLTELN 196
Query: 147 LSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAA 206
L T +T G+ L L NL+ LDL G TD L L+ LT L L+L ++V++ G
Sbjct: 197 LRFTKVTYLGLKELKGLTNLTSLDLFGTSTTDASLAELKGLTNLTELNLSDTKVTDAGLQ 256
Query: 207 VLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLN 261
L L+ L+L +T VT KL +S+L L+L F V TD L L L+
Sbjct: 257 ELTGLANLASLDLRFTKVTDAGLQKLKGLSNLAVLDL-FGTSV---TD--AGLKELGRLS 310
Query: 262 HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 316
L L+L T+V+ L L+ L L LR ++TD L +LS L+ LT+L +
Sbjct: 311 KLTVLDLGSTKVTGTGLKELTGLANLTSLHLRLTAVTDAGLKELSGLANLTSLDL 365
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 127/268 (47%), Gaps = 42/268 (15%)
Query: 104 TSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSL 163
TS +LTG+ R KVTD G+K + S+S L L L T +T G+ L L
Sbjct: 113 TSRDFISLTGLNL-------RFTKVTDLGLKEMRSLSKLTVLDLGRTKVTDAGLQELRGL 165
Query: 164 QNLS--------VLDLG-----GLP-----------VTDLVLRSLQVLTKLEYLDLWGSQ 199
NL+ V D G GL VT L L+ L+ LT L LDL+G+
Sbjct: 166 TNLTTWISAPHEVTDAGLKELSGLANLTELNLRFTKVTYLGLKELKGLTNLTSLDLFGTS 225
Query: 200 VSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSFIQQVGAETDLVLSL 254
++ A LK L+ LNL+ T VT +L +++L L+L F + A L
Sbjct: 226 TTDASLAELKGLTNLTELNLSDTKVTDAGLQELTGLANLASLDLRFTKVTDA------GL 279
Query: 255 TALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 314
L+ L++L L+L T V+DA L L +L L L + +T L +L+ L+ LT+L
Sbjct: 280 QKLKGLSNLAVLDLFGTSVTDAGLKELGRLSKLTVLDLGSTKVTGTGLKELTGLANLTSL 339
Query: 315 SIRDAVLTNSGLGSFKPPRSLKLLDLHG 342
+R +T++GL +L LDL G
Sbjct: 340 HLRLTAVTDAGLKELSGLANLTSLDLFG 367
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 107/209 (51%), Gaps = 12/209 (5%)
Query: 102 RVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLS 161
+VT L L G+T L LDL TDA + L ++ L +L LS+T +T G+ L+
Sbjct: 201 KVTYLGLKELKGLTNLTSLDLF-GTSTTDASLAELKGLTNLTELNLSDTKVTDAGLQELT 259
Query: 162 SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA- 220
L NL+ LDL VTD L+ L+ L+ L LDL+G+ V++ G L +L+ L+L
Sbjct: 260 GLANLASLDLRFTKVTDAGLQKLKGLSNLAVLDLFGTSVTDAGLKELGRLSKLTVLDLGS 319
Query: 221 ----WTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDA 276
TG+ +L +++L L+L A TD L L L +L L+L T VSD
Sbjct: 320 TKVTGTGLKELTGLANLTSLHLRLT----AVTDA--GLKELSGLANLTSLDLFGTPVSDT 373
Query: 277 TLFPLSTFKELIHLSLRNASLTDVSLHQL 305
L L +L L L ++TDV + +L
Sbjct: 374 DLKELKKLSKLTSLRLGRTAVTDVGIKEL 402
>gi|46447589|ref|YP_008954.1| hypothetical protein pc1955 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401230|emb|CAF24679.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 454
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 93/281 (33%), Positives = 139/281 (49%), Gaps = 30/281 (10%)
Query: 56 FPSLLEVFKHNAEAIELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGM 114
F ++ F EA+ G + DA +A L L+ L++ C+ +T L L +
Sbjct: 186 FQRIINHFLDEIEALNFSGNAHLADAHLLA-LKNCENLKLLHLEACQAITDDGLAHLALL 244
Query: 115 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGG 173
T L+ L+L CV +TDAG+ HL ++ L+ L LS +T G+A L+ L +L L+L
Sbjct: 245 TSLQHLNLYFCVNLTDAGLAHLTPLTALQHLNLSYCWKITDAGLAHLTPLTDLQHLNLSD 304
Query: 174 LP-VTDLVLRSLQVLTKLEYLDLWGS-QVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNIS 231
+TD L L LT L YL+L ++N G A L L +LNL W
Sbjct: 305 CENLTDAGLAHLTPLTALLYLNLSKCYHLTNVGLAHLAPLTGLQYLNLKW---------- 354
Query: 232 SLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 291
C NL+ A + SLTALQ HL+ + E ++DA L L++ L +L
Sbjct: 355 ---CWNLT-----DAGFSHLASLTALQ---HLDLSDCE--NLTDAGLAYLASLTALQYLG 401
Query: 292 LRNA-SLTDVSLHQLSSLSKLTNLSIRDA-VLTNSGLGSFK 330
L +LTDV L L+ L+ L +L +R+ +T++GL FK
Sbjct: 402 LSQCRNLTDVGLAHLTPLTALQHLDLRECDKVTDAGLARFK 442
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 66/129 (51%), Gaps = 8/129 (6%)
Query: 223 GVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPL 281
G+ L ++SL+ LNL F + TD L L L L+ LNL +++DA L L
Sbjct: 237 GLAHLALLTSLQHLNLYFCVNL---TDA--GLAHLTPLTALQHLNLSYCWKITDAGLAHL 291
Query: 282 STFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLD 339
+ +L HL+L + +LTD L L+ L+ L L++ LTN GL P L+ L+
Sbjct: 292 TPLTDLQHLNLSDCENLTDAGLAHLTPLTALLYLNLSKCYHLTNVGLAHLAPLTGLQYLN 351
Query: 340 LHGGWLLTE 348
L W LT+
Sbjct: 352 LKWCWNLTD 360
>gi|46446910|ref|YP_008275.1| hypothetical protein pc1276 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400551|emb|CAF24000.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 667
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 156/315 (49%), Gaps = 32/315 (10%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N +A+ L+ + + +A+L + L+ LN+ C +T + L L + L+ L+L++C
Sbjct: 284 NLKALHLQECDKLTDAGLAHLASLMALQHLNLNGCWELTDAGLAHLASLMALQHLNLAKC 343
Query: 126 VKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGL-PVTDLVLRS 183
K+TDAG+ HL S+ L+ L LS LT G+ L L L+ L+L +TD L
Sbjct: 344 HKITDAGLAHLTSLVALQHLDLSCCRNLTDAGLTHLRPLVALTHLNLAKCHKITDAGLAH 403
Query: 184 LQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAWT------GVTKLPNISSLECL 236
L L L++LDL + ++++ G A L L L+L+++ G+ L ++ +L+ L
Sbjct: 404 LTSLVALQHLDLSYCEKLTDAGLAHLTPLVALQHLDLSYSHHFTNAGLAHLTSLVALQHL 463
Query: 237 NL-SFIQQVGAETDLVLSLTALQNLN-------------------HLERLNLEQT-QVSD 275
NL S + A + SL ALQ+L+ L+ L+L + ++
Sbjct: 464 NLNSCYKFTDAGLAHLTSLVALQHLDLSCCRNLTDAGLAHLAPLVALQHLDLSYSHHFTN 523
Query: 276 ATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDA-VLTNSGLGSFKPPR 333
A L L++ L HL L +LTD L L+SL L +L + LT++GL P
Sbjct: 524 AGLAHLTSLVALQHLDLSCCRNLTDAGLAHLTSLVALQHLDLSSCKKLTDAGLEHLTPLV 583
Query: 334 SLKLLDLHGGWLLTE 348
+L+ LDL LT+
Sbjct: 584 ALQHLDLSSCKKLTD 598
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/258 (34%), Positives = 133/258 (51%), Gaps = 17/258 (6%)
Query: 95 LNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLT 153
LN + +T + L AL LK L L C K+TDAG+ HL S+ L+ L L+ LT
Sbjct: 263 LNFSKNIFLTDAHLLALKNCKNLKALHLQECDKLTDAGLAHLASLMALQHLNLNGCWELT 322
Query: 154 ADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMF 211
G+A L+SL L L+L +TD L L L L++LDL +++ G L+
Sbjct: 323 DAGLAHLASLMALQHLNLAKCHKITDAGLAHLTSLVALQHLDLSCCRNLTDAGLTHLRPL 382
Query: 212 PRLSFLNLAW------TGVTKLPNISSLECLNLSFIQQVGAETDLVLS-LTALQNLNHLE 264
L+ LNLA G+ L ++ +L+ L+LS+ +++ TD L+ LT L L HL+
Sbjct: 383 VALTHLNLAKCHKITDAGLAHLTSLVALQHLDLSYCEKL---TDAGLAHLTPLVALQHLD 439
Query: 265 RLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDA-VLT 322
L+ ++A L L++ L HL+L + TD L L+SL L +L + LT
Sbjct: 440 -LSYSH-HFTNAGLAHLTSLVALQHLNLNSCYKFTDAGLAHLTSLVALQHLDLSCCRNLT 497
Query: 323 NSGLGSFKPPRSLKLLDL 340
++GL P +L+ LDL
Sbjct: 498 DAGLAHLAPLVALQHLDL 515
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N DA +A+L + L+ L+++ C+++T + L LT + L+ LDLS C K+TDAG+ H
Sbjct: 545 NLTDA-GLAHLTSLVALQHLDLSSCKKLTDAGLEHLTPLVALQHLDLSSCKKLTDAGLAH 603
Query: 136 LLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG 172
L + L+ L LS LT G+A L+ L L L+L
Sbjct: 604 LAPLVALQHLDLSSCKKLTDAGLAHLAPLVALQHLNLN 641
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+ +L L+ L+++ C+++T + L L + L+ LDLS C K+TDAG+ HL + L
Sbjct: 576 LEHLTPLVALQHLDLSSCKKLTDAGLAHLAPLVALQHLDLSSCKKLTDAGLAHLAPLVAL 635
Query: 143 EKLWLSETG-LTADGIALLSS 162
+ L L+ LT G+A S
Sbjct: 636 QHLNLNWCDKLTDAGVAHFKS 656
>gi|46447590|ref|YP_008955.1| hypothetical protein pc1956 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401231|emb|CAF24680.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 659
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 103/327 (31%), Positives = 160/327 (48%), Gaps = 30/327 (9%)
Query: 56 FPSLLEVFKHNAEAIELRGENS--VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTG 113
F ++ F + EA+ EN+ DA +A L + L+ L++ +CR +T + L L
Sbjct: 216 FQRIINQFSNEIEALNF-SENAHLTDAHLLA-LKNCKNLKELHLQECRNLTDAGLVHLAP 273
Query: 114 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG 172
+ LK L+L+ C K+T+ G+ HL ++ L+ L L LT G+A L+ L L L+L
Sbjct: 274 LVALKHLNLNFCDKLTNTGLAHLRPLTALQHLNLGNCRNLTDAGLAHLTPLTALQHLNLN 333
Query: 173 GL-PVTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFLNLAW------TGV 224
+TD L L LT L++LDL + +++ G LK L LNL+ G+
Sbjct: 334 FCDKLTDTGLVRLSPLTALQHLDLSDCENLTDAGLVHLKPLVALQHLNLSCCENLTDAGL 393
Query: 225 TKLPNISSLECLNLSFIQQVGAETDLVLS----LTALQNLNHLERLNLEQTQVSDATLFP 280
L + +L+ L+LS + TD L+ LTALQ L+ L N ++DA L
Sbjct: 394 VHLKLLVALQHLDLSDCNNL---TDAGLAHLTPLTALQYLD-LSYCN----NLTDAGLVH 445
Query: 281 LSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDA-VLTNSGLGSFKPPRSLKLL 338
L L HL LR + D L L+ L+ L LS+ LT++GLG K +L+ L
Sbjct: 446 LKFLTALQHLDLRGCDKVADDGLAHLTPLTALQALSLSQCRNLTDAGLGHLKLLTALQYL 505
Query: 339 DLHGGWLLTEDAILQFCKMHPRIEVWH 365
L W LT+ ++ + P + + H
Sbjct: 506 RLSQCWNLTDAGLIH---LRPLVALQH 529
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 106/347 (30%), Positives = 157/347 (45%), Gaps = 50/347 (14%)
Query: 47 RHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSS 106
R+L L+ + L KH + L + + +A+L L+ LN+ +CR +T +
Sbjct: 261 RNLTDAGLVHLAPLVALKH----LNLNFCDKLTNTGLAHLRPLTALQHLNLGNCRNLTDA 316
Query: 107 ALWALT-------------------------GMTCLKELDLSRCVKVTDAGMKHLLSIST 141
L LT +T L+ LDLS C +TDAG+ HL +
Sbjct: 317 GLAHLTPLTALQHLNLNFCDKLTDTGLVRLSPLTALQHLDLSDCENLTDAGLVHLKPLVA 376
Query: 142 LEKLWLSET-GLTADGIA---LLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL-W 196
L+ L LS LT G+ LL +LQ+L + D L TD L L LT L+YLDL +
Sbjct: 377 LQHLNLSCCENLTDAGLVHLKLLVALQHLDLSDCNNL--TDAGLAHLTPLTALQYLDLSY 434
Query: 197 GSQVSNRGAAVLKMFPRLSFLNL------AWTGVTKLPNISSLECLNLSFIQQVGAETDL 250
+ +++ G LK L L+L A G+ L +++L+ L+LS Q TD
Sbjct: 435 CNNLTDAGLVHLKFLTALQHLDLRGCDKVADDGLAHLTPLTALQALSLS---QCRNLTD- 490
Query: 251 VLSLTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHLSLRN-ASLTDVSLHQLSSL 308
L L+ L L+ L L Q ++DA L L L HL L +LTDV L L+ L
Sbjct: 491 -AGLGHLKLLTALQYLRLSQCWNLTDAGLIHLRPLVALQHLDLSYCGNLTDVGLVHLTPL 549
Query: 309 SKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQF 354
L +L + LT GL + +L+ L L+ W LT+ ++
Sbjct: 550 MALQHLDLNYCENLTGDGLAHLRSLTTLQHLSLNQCWNLTDAGLVHL 596
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 140/296 (47%), Gaps = 32/296 (10%)
Query: 40 HLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVAD 99
HL S +L L+ LL +H ++L N++ +A+L L+ L+++
Sbjct: 379 HLNLSCCENLTDAGLVHLKLLVALQH----LDLSDCNNLTDAGLAHLTPLTALQYLDLSY 434
Query: 100 CRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIA 158
C +T + L L +T L+ LDL C KV D G+ HL ++ L+ L LS+ LT G+
Sbjct: 435 CNNLTDAGLVHLKFLTALQHLDLRGCDKVADDGLAHLTPLTALQALSLSQCRNLTDAGLG 494
Query: 159 LLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 217
L L L L L +TD L L+ L L++LDL S G
Sbjct: 495 HLKLLTALQYLRLSQCWNLTDAGLIHLRPLVALQHLDL-----SYCG------------- 536
Query: 218 NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDA 276
NL G+ L + +L+ L+L++ + + + L L++L L+ L+L Q ++DA
Sbjct: 537 NLTDVGLVHLTPLMALQHLDLNYCENLTGD-----GLAHLRSLTTLQHLSLNQCWNLTDA 591
Query: 277 TLFPLSTFKELIHLSLRN-ASLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFK 330
L L L HL L + TDV L L+SL L +L++R +T+ GL FK
Sbjct: 592 GLVHLEPLTALQHLDLSYCGNFTDVGLVHLTSLMALQHLNLRGCDRVTDVGLALFK 647
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 112/233 (48%), Gaps = 36/233 (15%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ ++LRG + V + +A+L L++L+++ CR +T + L L +T L+ L LS+C
Sbjct: 453 QHLDLRGCDKVADDGLAHLTPLTALQALSLSQCRNLTDAGLGHLKLLTALQYLRLSQCWN 512
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
+TDAG+ HL + L+ L LS G +TD+ L L L
Sbjct: 513 LTDAGLIHLRPLVALQHLDLSYCG-----------------------NLTDVGLVHLTPL 549
Query: 188 TKLEYLDL-WGSQVSNRGAAVLKMFPRLSFL------NLAWTGVTKLPNISSLECLNLSF 240
L++LDL + ++ G A L+ L L NL G+ L +++L+ L+LS+
Sbjct: 550 MALQHLDLNYCENLTGDGLAHLRSLTTLQHLSLNQCWNLTDAGLVHLEPLTALQHLDLSY 609
Query: 241 IQQVGAETDL-VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL 292
G TD+ ++ LT+L L HL + +V+D L F +HL +
Sbjct: 610 ---CGNFTDVGLVHLTSLMALQHLNLRGCD--RVTDVGLALFKIFATSLHLKI 657
>gi|46447199|ref|YP_008564.1| hypothetical protein pc1565 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400840|emb|CAF24289.1| hypothetical protein pc1565 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 1143
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 117/386 (30%), Positives = 180/386 (46%), Gaps = 59/386 (15%)
Query: 3 RERESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHL---ADSLLRHLIRRRLIFPSL 59
+ +E EL+ CIE S+ + QR+ L L +L A S+L + I F
Sbjct: 122 KSQELELLS-CIEDNLDELISILNFAHQRQ-LNILKNYLECAAVSVLLNQISELTEFEEF 179
Query: 60 LEVFKHNAEAIELRGENSVDAEWMAYL--------GAFRYLRSLNVADCRRVTSSALWAL 111
L +F + E G S+D AYL + L+ L + +CR T + L L
Sbjct: 180 LNLFSNEIEG----GIESLDFSNNAYLTDAHLLALKDCKNLKVLRLHECRNFTDAGLAHL 235
Query: 112 TGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS-ETGLTADGIALLSSLQNLSVLD 170
+ + L+ LDL C K+TD+G+ +L + L+ L L+ LT DG+A LS L L LD
Sbjct: 236 SRLVALQHLDLGGCYKITDSGLTYLSRLVALQHLNLNCCVCLTDDGLAYLSHLVALQHLD 295
Query: 171 LGGL--------------------------PVTDLVLRSLQVLTKLEYLDLWG-SQVSNR 203
LG +TD L L LT L++LDL +++++
Sbjct: 296 LGECYKITDSGLAHLSSLLALQHLNLGCCNNLTDSGLAHLSHLTSLKHLDLRDCAKLTDS 355
Query: 204 GAAVLKMFPRLSFLNLAWT------GVTKLPNISSLECLNLSFIQQVGAETDLVLS-LTA 256
G A L + L +LNL G++ L ++ +L+ L+L +++ + LS L A
Sbjct: 356 GLAHLSLLVNLQYLNLNRCYNLTDRGLSHLSHLVALQYLDLGLCKKLTSSGLAHLSPLVA 415
Query: 257 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR-NASLTDVSLHQLSSLSKLTNLS 315
LQ L+ L+R +++D L LS L HL+L A LTD L LS L L +L+
Sbjct: 416 LQYLD-LDRCG----EITDRGLAHLSRLVALQHLNLNCCACLTDDGLAYLSPLVALRHLN 470
Query: 316 IR-DAVLTNSGLGSFKPPRSLKLLDL 340
+R LT++GL P +L+ L+L
Sbjct: 471 LRCCGNLTSAGLAHLTPLIALQYLNL 496
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 116/374 (31%), Positives = 176/374 (47%), Gaps = 38/374 (10%)
Query: 3 RERESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHL---ADSLLRHLIRRRLIFPSL 59
+ +E EL+ CIE V + R+R+ L L +L A S+L + I F
Sbjct: 687 KSQELELLS-CIEDNLDELIFVLNFARKRQ-LNILKNYLECAAVSVLLNQISELTEFEEF 744
Query: 60 LEVFKHNAEAIELRGENSVDAEWMAYL--------GAFRYLRSLNVADCRRVTSSALWAL 111
L +F + E G S+D AYL + L+ L + +CR T + L L
Sbjct: 745 LNLFSNEIEG----GIESLDFSNNAYLTDAHLLALKDCKNLKVLRLHECRNFTDAGLAHL 800
Query: 112 TGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLD 170
+ + L+ LDL C K+TD+G+ HL + L+ L L +T G+ LS L L L+
Sbjct: 801 SPLVALQHLDLGGCYKITDSGLAHLSRLVALQHLDLGGCYEITDSGLTYLSRLVALQHLN 860
Query: 171 LG-GLPVTDLVLRSLQVLTKLEYLDL---WGSQVSNRGAAVLKMFPRLSFLNLAW----- 221
L + +TD L L L L+YLDL W ++++RG A L L LNL
Sbjct: 861 LNRCVCLTDDGLAYLSHLVALQYLDLDRCW--KITDRGLAHLSSLLALQHLNLGCCNNLT 918
Query: 222 -TGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQ-TQVSDATLF 279
+G+ L +++SL+ L+L + TD L+ +L L +L+ LNL + ++D L
Sbjct: 919 DSGLAHLSHLTSLKHLDL---RDCAKLTDSGLAHLSL--LVNLQYLNLNRCNNLTDRGLA 973
Query: 280 PLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSI-RDAVLTNSGLGSFKPPRSLKL 337
LS L HL L +TD L LS L L L++ R LT+ GL +L+
Sbjct: 974 HLSHLVALQHLDLGECYKITDSGLAHLSLLVNLQYLNLNRCDNLTDRGLAHLSRLVTLQH 1033
Query: 338 LDLHGGWLLTEDAI 351
L+L+ LT+D +
Sbjct: 1034 LNLNCCVCLTDDGL 1047
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 99/303 (32%), Positives = 146/303 (48%), Gaps = 25/303 (8%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ ++L G + + YL L+ LN+ C +T L L+ + L+ LDL C K
Sbjct: 242 QHLDLGGCYKITDSGLTYLSRLVALQHLNLNCCVCLTDDGLAYLSHLVALQHLDLGECYK 301
Query: 128 VTDAGMKHLLSISTLEKLWLS-ETGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQ 185
+TD+G+ HL S+ L+ L L LT G+A LS L +L LDL +TD L L
Sbjct: 302 ITDSGLAHLSSLLALQHLNLGCCNNLTDSGLAHLSHLTSLKHLDLRDCAKLTDSGLAHLS 361
Query: 186 VLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNL 238
+L L+YL+L +++RG + L L +L+L +G+ L + +L+ L+L
Sbjct: 362 LLVNLQYLNLNRCYNLTDRGLSHLSHLVALQYLDLGLCKKLTSSGLAHLSPLVALQYLDL 421
Query: 239 SFIQQVGAETDLVLS----LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR- 293
+ G TD L+ L ALQ+LN LN ++D L LS L HL+LR
Sbjct: 422 ---DRCGEITDRGLAHLSRLVALQHLN----LNCCAC-LTDDGLAYLSPLVALRHLNLRC 473
Query: 294 NASLTDVSLHQLSSLSKLT--NLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 351
+LT L L+ L L NLS D+ L ++GL SLK LDL T+ +
Sbjct: 474 CGNLTSAGLAHLTPLIALQYLNLSYCDS-LNDNGLTHLTRLASLKHLDLSECPYFTDSGL 532
Query: 352 LQF 354
F
Sbjct: 533 AHF 535
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/243 (34%), Positives = 116/243 (47%), Gaps = 28/243 (11%)
Query: 93 RSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE-TG 151
+ LN+ C +T S L L+ +T LK LDL C K+TD+G+ HL + L+ L L+
Sbjct: 907 QHLNLGCCNNLTDSGLAHLSHLTSLKHLDLRDCAKLTDSGLAHLSLLVNLQYLNLNRCNN 966
Query: 152 LTADGIALLSSLQNLSVLDLG-GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKM 210
LT G+A LS L L LDLG +TD L L +L L+YL+L NR
Sbjct: 967 LTDRGLAHLSHLVALQHLDLGECYKITDSGLAHLSLLVNLQYLNL------NRCD----- 1015
Query: 211 FPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 270
NL G+ L + +L+ LNL+ V D + L+ L L H LNL
Sbjct: 1016 -------NLTDRGLAHLSRLVTLQHLNLNCC--VCLTDDGLAYLSPLVALRH---LNLRS 1063
Query: 271 T-QVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDA-VLTNSGLG 327
++ A L L+ L +L+L SL D L L+ L+ L +L + + T SGL
Sbjct: 1064 CDNLTSAGLAHLTPLIALQYLNLSYCDSLNDNGLTHLTRLASLKHLDLSECPYFTISGLA 1123
Query: 328 SFK 330
FK
Sbjct: 1124 HFK 1126
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 97/286 (33%), Positives = 140/286 (48%), Gaps = 19/286 (6%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ ++L G + + YL L+ LN+ C +T L L+ + L+ LDL RC K
Sbjct: 832 QHLDLGGCYEITDSGLTYLSRLVALQHLNLNRCVCLTDDGLAYLSHLVALQYLDLDRCWK 891
Query: 128 VTDAGMKHLLSISTLEKLWLS-ETGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQ 185
+TD G+ HL S+ L+ L L LT G+A LS L +L LDL +TD L L
Sbjct: 892 ITDRGLAHLSSLLALQHLNLGCCNNLTDSGLAHLSHLTSLKHLDLRDCAKLTDSGLAHLS 951
Query: 186 VLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNL 238
+L L+YL+L + +++RG A L L L+L +G+ L + +L+ LNL
Sbjct: 952 LLVNLQYLNLNRCNNLTDRGLAHLSHLVALQHLDLGECYKITDSGLAHLSLLVNLQYLNL 1011
Query: 239 SFIQQVGAETDLVLSLTALQNLNHLERLNLE-QTQVSDATLFPLSTFKELIHLSLRNA-S 296
+ + TD L L L L+ LNL ++D L LS L HL+LR+ +
Sbjct: 1012 NRCDNL---TD--RGLAHLSRLVTLQHLNLNCCVCLTDDGLAYLSPLVALRHLNLRSCDN 1066
Query: 297 LTDVSLHQLSSLSKLT--NLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
LT L L+ L L NLS D+ L ++GL SLK LDL
Sbjct: 1067 LTSAGLAHLTPLIALQYLNLSYCDS-LNDNGLTHLTRLASLKHLDL 1111
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%)
Query: 70 IELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVT 129
+ LR ++ + +A+L L+ LN++ C + + L LT + LK LDLS C T
Sbjct: 469 LNLRCCGNLTSAGLAHLTPLIALQYLNLSYCDSLNDNGLTHLTRLASLKHLDLSECPYFT 528
Query: 130 DAGMKHLLSIST 141
D+G+ H +++T
Sbjct: 529 DSGLAHFTALAT 540
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%)
Query: 70 IELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVT 129
+ LR +++ + +A+L L+ LN++ C + + L LT + LK LDLS C T
Sbjct: 1059 LNLRSCDNLTSAGLAHLTPLIALQYLNLSYCDSLNDNGLTHLTRLASLKHLDLSECPYFT 1118
Query: 130 DAGMKHLLSIS 140
+G+ H +++
Sbjct: 1119 ISGLAHFKALA 1129
>gi|255553315|ref|XP_002517700.1| F-box/LRR-repeat protein, putative [Ricinus communis]
gi|223543332|gb|EEF44864.1| F-box/LRR-repeat protein, putative [Ricinus communis]
Length = 529
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 177/399 (44%), Gaps = 70/399 (17%)
Query: 3 RERESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEV 62
+R L+ LCI+ + E + K+ + LP ++ + L+ + + + +E
Sbjct: 50 NQRCPSLMELCIQ---KIREDIDKYS----TFSMLPRDISQQIFNELVYSQRLNDATIEA 102
Query: 63 FK-------HNAE--------------------AIELRGENSVDAEWMAYLGAFRYLRSL 95
F+ H E +++L G + D+ +AYL L++L
Sbjct: 103 FRDCALQDLHLGECPGVNDSWMDVISSQGISLLSVDLSGSDVTDS-GLAYLKDCTNLQAL 161
Query: 96 NVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTAD 155
N C +++ L ++ + L+ L++ C +TDA MK+L + L+ L +S + +T
Sbjct: 162 NFNYCDQISDPGLSNISDLLKLESLNIKWCNCITDADMKYLSGLVKLKGLQISCSKVTDV 221
Query: 156 GIALLSSLQNLSVLDLGGLPVT------------------------DLVLRSLQVLTKLE 191
GI+ L L L++L+L G PVT D + L +L+
Sbjct: 222 GISYLKGLHKLNLLNLEGCPVTVACLDSLSALAALLYLNLNRCHLSDDGCEAFSKLGRLK 281
Query: 192 YLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSFIQQVGA 246
L+L + +S+ LK L LNL G+ L + L+CL LS +VG+
Sbjct: 282 VLNLGFNDISDACLVHLKGLTNLESLNLDSCRIDDEGLANLTGLRHLKCLVLSDT-EVGS 340
Query: 247 ETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLS 306
L L L +LE +NL T ++D + LS L L+L +TD L L+
Sbjct: 341 S-----GLRHLSGLTNLESINLSFTMITDGGIRKLSGLSSLKSLNLDARQITDSGLAALT 395
Query: 307 SLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 345
+L+ LT+L + A +T+SG + ++L+ L++ GG L
Sbjct: 396 NLTGLTHLDLFGARITDSGTHYLRNFKNLQSLEICGGGL 434
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 131/294 (44%), Gaps = 36/294 (12%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N +A+ + + ++ + L SLN+ C +T + + L+G+ LK L +S C
Sbjct: 157 NLQALNFNYCDQISDPGLSNISDLLKLESLNIKWCNCITDADMKYLSGLVKLKGLQIS-C 215
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTA------------------------DGIALLS 161
KVTD G+ +L + L L L +T DG S
Sbjct: 216 SKVTDVGISYLKGLHKLNLLNLEGCPVTVACLDSLSALAALLYLNLNRCHLSDDGCEAFS 275
Query: 162 SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW 221
L L VL+LG ++D L L+ LT LE L+L ++ + G A L L L L+
Sbjct: 276 KLGRLKVLNLGFNDISDACLVHLKGLTNLESLNLDSCRIDDEGLANLTGLRHLKCLVLSD 335
Query: 222 T-----GVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDA 276
T G+ L +++LE +NLSF + L L+ L+ LNL+ Q++D+
Sbjct: 336 TEVGSSGLRHLSGLTNLESINLSFTMITDG------GIRKLSGLSSLKSLNLDARQITDS 389
Query: 277 TLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 330
L L+ L HL L A +TD H L + L +L I LT++G+ + K
Sbjct: 390 GLAALTNLTGLTHLDLFGARITDSGTHYLRNFKNLQSLEICGGGLTDAGIRNIK 443
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 120/236 (50%), Gaps = 6/236 (2%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N + + +L L SLN+ CR + L LTG+ LK L LS +V +G+
Sbjct: 286 GFNDISDACLVHLKGLTNLESLNLDSCR-IDDEGLANLTGLRHLKCLVLSD-TEVGSSGL 343
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
+HL ++ LE + LS T +T GI LS L +L L+L +TD L +L LT L +L
Sbjct: 344 RHLSGLTNLESINLSFTMITDGGIRKLSGLSSLKSLNLDARQITDSGLAALTNLTGLTHL 403
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK--LPNISSLECLNLSFIQQVGAETDLV 251
DL+G+++++ G L+ F L L + G+T + NI L L+L + Q TD
Sbjct: 404 DLFGARITDSGTHYLRNFKNLQSLEICGGGLTDAGIRNIKDLSSLSLLNLSQNCNLTDKS 463
Query: 252 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 307
L L + L L LN+ ++++ A L L K L L+L + +T + +L S
Sbjct: 464 LEL--ISGLTGLVSLNVSNSRITSAGLQHLKPLKNLKSLTLESCKVTATDIKKLQS 517
>gi|168698162|ref|ZP_02730439.1| hypothetical protein GobsU_01482 [Gemmata obscuriglobus UQM 2246]
Length = 295
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 100/218 (45%), Gaps = 25/218 (11%)
Query: 124 RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRS 183
R ++VTDAG+K L ++ L +L L T +T G+ L+ L+NL+ LDLG VTD L++
Sbjct: 8 RDLQVTDAGLKELAGLTNLTQLILLGTAVTDVGLEELAPLKNLNTLDLGKTKVTDAGLKA 67
Query: 184 LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQ 243
L LT L L L + V++ G L F L L L T VT
Sbjct: 68 LAPLTGLTRLALGDTGVTDAGLKELVPFKSLKTLYLFSTKVTD----------------- 110
Query: 244 VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLH 303
L L +L L L T V+DA L L FK L L L +TD L
Sbjct: 111 --------AGLKELGRFKNLTVLGLGGTGVTDAGLRELGRFKNLTALGLSGTGVTDAGLK 162
Query: 304 QLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 341
+L+ L LT L + + + GL P ++L LDL+
Sbjct: 163 ELAPLKNLTELGLGGTGVADVGLKELAPFKNLAKLDLY 200
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 116/252 (46%), Gaps = 28/252 (11%)
Query: 92 LRSLNVADC--RRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
L++LN D +VT + L AL +T L L L VTDAG+K L+ +L+ L+L
Sbjct: 47 LKNLNTLDLGKTKVTDAGLKALAPLTGLTRLALGDT-GVTDAGLKELVPFKSLKTLYLFS 105
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
T +T G+ L +NL+VL LGG VTD LR L L L L G+ V++ G L
Sbjct: 106 TKVTDAGLKELGRFKNLTVLGLGGTGVTDAGLRELGRFKNLTALGLSGTGVTDAGLKELA 165
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L L TGV + L L +L +L+L
Sbjct: 166 PLKNLTELGLGGTGVADV-------------------------GLKELAPFKNLAKLDLY 200
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 329
T+V+DA L L K L L L +TD L +L+ L LT L + +T++GL
Sbjct: 201 STKVTDAGLKELGLLKNLTLLDLGRTQVTDDGLRELTGLKALTTLILIGTGVTDAGLKEL 260
Query: 330 KPPRSLKLLDLH 341
+L L+L+
Sbjct: 261 AGLTNLTRLNLY 272
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 98/208 (47%), Gaps = 12/208 (5%)
Query: 102 RVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLS 161
+VT + L L G+T L +L L VTD G++ L + L L L +T +T G+ L+
Sbjct: 11 QVTDAGLKELAGLTNLTQLILLGTA-VTDVGLEELAPLKNLNTLDLGKTKVTDAGLKALA 69
Query: 162 SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW 221
L L+ L LG VTD L+ L L+ L L+ ++V++ G L F L+ L L
Sbjct: 70 PLTGLTRLALGDTGVTDAGLKELVPFKSLKTLYLFSTKVTDAGLKELGRFKNLTVLGLGG 129
Query: 222 TGVT-----KLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDA 276
TGVT +L +L L LS A L L L +L L L T V+D
Sbjct: 130 TGVTDAGLRELGRFKNLTALGLSGTGVTDA------GLKELAPLKNLTELGLGGTGVADV 183
Query: 277 TLFPLSTFKELIHLSLRNASLTDVSLHQ 304
L L+ FK L L L + +TD L +
Sbjct: 184 GLKELAPFKNLAKLDLYSTKVTDAGLKE 211
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 103/205 (50%), Gaps = 7/205 (3%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G+ V + L F+ L++L + + VT + L L L L L VTDAG+
Sbjct: 80 GDTGVTDAGLKELVPFKSLKTLYLFSTK-VTDAGLKELGRFKNLTVLGLG-GTGVTDAGL 137
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
+ L L L LS TG+T G+ L+ L+NL+ L LGG V D+ L+ L L L
Sbjct: 138 RELGRFKNLTALGLSGTGVTDAGLKELAPLKNLTELGLGGTGVADVGLKELAPFKNLAKL 197
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT--KLPNISSLECLNLSFIQQVGAETDLV 251
DL+ ++V++ G L + L+ L+L T VT L ++ L+ L + G TD
Sbjct: 198 DLYSTKVTDAGLKELGLLKNLTLLDLGRTQVTDDGLRELTGLKALTTLILIGTGV-TD-- 254
Query: 252 LSLTALQNLNHLERLNLEQTQVSDA 276
L L L +L RLNL +T+V+DA
Sbjct: 255 AGLKELAGLTNLTRLNLYRTKVTDA 279
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 70/142 (49%), Gaps = 4/142 (2%)
Query: 63 FKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDL 122
FK N A+ L G DA + L + L L + V L L L +LDL
Sbjct: 143 FK-NLTALGLSGTGVTDA-GLKELAPLKNLTELGLGGTG-VADVGLKELAPFKNLAKLDL 199
Query: 123 SRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLR 182
KVTDAG+K L + L L L T +T DG+ L+ L+ L+ L L G VTD L+
Sbjct: 200 -YSTKVTDAGLKELGLLKNLTLLDLGRTQVTDDGLRELTGLKALTTLILIGTGVTDAGLK 258
Query: 183 SLQVLTKLEYLDLWGSQVSNRG 204
L LT L L+L+ ++V++ G
Sbjct: 259 ELAGLTNLTRLNLYRTKVTDAG 280
>gi|383455271|ref|YP_005369260.1| hypothetical protein COCOR_03284 [Corallococcus coralloides DSM
2259]
gi|380733131|gb|AFE09133.1| leucine-rich repeat-containing protein [Corallococcus coralloides
DSM 2259]
Length = 614
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 140/304 (46%), Gaps = 32/304 (10%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
+ +VD +A L R LR+L V VT++ L AL M L+ L L+R V+DAG+
Sbjct: 234 DTTVDDTVLASLPGER-LRTL-VMSGTHVTNAGLGALRRMPALRWLGLART-SVSDAGLA 290
Query: 135 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 194
HL ++ L+ L L TG+T G+ L+ L L VL L + +R L LT+LE L
Sbjct: 291 HLGALRMLDALHLGSTGVTDAGLIHLARLPALRVLVLSKTRIRGPGVRHLAGLTQLEVLH 350
Query: 195 LWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT--KLPNISSLECLNLSFIQQVGAETDLVL 252
L + + N L+ L L L+ T VT LP +S L+ L + + E
Sbjct: 351 LDDTSIGNAALRHLQGLQHLRDLELSRTAVTGSGLPALSGLQALESLGLSGLALEDA--- 407
Query: 253 SLTALQNLNHLERLNLEQTQV------------------------SDATLFPLSTFKELI 288
SL AL+ L L RL+L T++ +D + L TF +L
Sbjct: 408 SLAALEPLERLSRLDLSATRIGPEALKQLGSRMVLRHLDLSRTDFNDGWVATLQTFTQLQ 467
Query: 289 HLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 348
L LTD+ L QLS L +L +L + ++ SGL + L LDL G W+ +
Sbjct: 468 SLRAIRTILTDLGLGQLSELRELESLQVSGNPISGSGLVPLQKLPHLVKLDLGGTWMTDD 527
Query: 349 DAIL 352
A L
Sbjct: 528 GARL 531
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 114/269 (42%), Gaps = 35/269 (13%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC---------- 125
SV +A+LGA R L +L++ VT + L L + L+ L LS+
Sbjct: 282 TSVSDAGLAHLGALRMLDALHLGSTG-VTDAGLIHLARLPALRVLVLSKTRIRGPGVRHL 340
Query: 126 -------------VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLG 172
+ +A ++HL + L L LS T +T G+ LS LQ L L L
Sbjct: 341 AGLTQLEVLHLDDTSIGNAALRHLQGLQHLRDLELSRTAVTGSGLPALSGLQALESLGLS 400
Query: 173 GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTG-----VTKL 227
GL + D L +L+ L +L LDL +++ L L L+L+ T V L
Sbjct: 401 GLALEDASLAALEPLERLSRLDLSATRIGPEALKQLGSRMVLRHLDLSRTDFNDGWVATL 460
Query: 228 PNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 287
+ L+ L I+ + TDL L L L LE L + +S + L PL L
Sbjct: 461 QTFTQLQSLR--AIRTI--LTDL--GLGQLSELRELESLQVSGNPISGSGLVPLQKLPHL 514
Query: 288 IHLSLRNASLTDVSLHQLSSLSKLTNLSI 316
+ L L +TD L+ KL+ LS+
Sbjct: 515 VKLDLGGTWMTDDGARLLAGFEKLSWLSL 543
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 93/200 (46%), Gaps = 16/200 (8%)
Query: 84 AYLGAFRYLRSLNVAD--CRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIST 141
A L A L L+ D R+ AL L L+ LDLSR D + L + +
Sbjct: 407 ASLAALEPLERLSRLDLSATRIGPEALKQLGSRMVLRHLDLSRT-DFNDGWVATLQTFTQ 465
Query: 142 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVS 201
L+ L T LT G+ LS L+ L L + G P++ L LQ L L LDL G+ ++
Sbjct: 466 LQSLRAIRTILTDLGLGQLSELRELESLQVSGNPISGSGLVPLQKLPHLVKLDLGGTWMT 525
Query: 202 NRGAAVLKMFPRLSFLNLAWTGV-----TKLPNISSLECLNLSFIQQVGAETDLVLSLTA 256
+ GA +L F +LS+L+LA T + LP SL L L + A + A
Sbjct: 526 DDGARLLAGFEKLSWLSLAGTRIGDESLVHLPG--SLLTLYLLRTKVTDA------GMPA 577
Query: 257 LQNLNHLERLNLEQTQVSDA 276
L L L ++L +T VS+A
Sbjct: 578 LHRLPLLREIDLRETAVSEA 597
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 93/198 (46%), Gaps = 16/198 (8%)
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
L+ +++ L LSET L + +A L++ L L L G VTD L SLQ + L L L
Sbjct: 125 LVKDTSVVSLHLSETALGDEHLAALANATRLQALHLDGTRVTDAGLASLQGMPHLAVLRL 184
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSFIQQVGAETDL 250
+ VS+RG A+L L L+L+ T V+ L + LE L+LS D
Sbjct: 185 DATAVSDRGLALLASLTTLRRLSLSGTSVSPRGLGLLAAQTELEWLDLS---------DT 235
Query: 251 VLSLTALQNL--NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 308
+ T L +L L L + T V++A L L L L L S++D L L +L
Sbjct: 236 TVDDTVLASLPGERLRTLVMSGTHVTNAGLGALRRMPALRWLGLARTSVSDAGLAHLGAL 295
Query: 309 SKLTNLSIRDAVLTNSGL 326
L L + +T++GL
Sbjct: 296 RMLDALHLGSTGVTDAGL 313
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 93/206 (45%), Gaps = 15/206 (7%)
Query: 129 TDAGMKHLLSIST---LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
T G +HL +++ L+ L L T +T G+A L + +L+VL L V+D L L
Sbjct: 139 TALGDEHLAALANATRLQALHLDGTRVTDAGLASLQGMPHLAVLRLDATAVSDRGLALLA 198
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV-----TKLPNISSLECLNLSF 240
LT L L L G+ VS RG +L L +L+L+ T V LP L L +S
Sbjct: 199 SLTTLRRLSLSGTSVSPRGLGLLAAQTELEWLDLSDTTVDDTVLASLPG-ERLRTLVMSG 257
Query: 241 IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 300
A L AL+ + L L L +T VSDA L L + L L L + +TD
Sbjct: 258 THVTNA------GLGALRRMPALRWLGLARTSVSDAGLAHLGALRMLDALHLGSTGVTDA 311
Query: 301 SLHQLSSLSKLTNLSIRDAVLTNSGL 326
L L+ L L L + + G+
Sbjct: 312 GLIHLARLPALRVLVLSKTRIRGPGV 337
>gi|290997932|ref|XP_002681535.1| predicted protein [Naegleria gruberi]
gi|284095159|gb|EFC48791.1| predicted protein [Naegleria gruberi]
Length = 448
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 123/247 (49%), Gaps = 11/247 (4%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N + E Y+ + L SLN+ + R+ + +++ M L L + ++ D G
Sbjct: 154 GGNEIGDEGSKYISEMKQLTSLNIGE-NRIGDEGVKSISEMKQLTSLSIYNN-RIGDEGA 211
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
K + + L L +S G+ G+ +S ++ L+ LD+ G + D + + + +L+ L
Sbjct: 212 KSISEMKQLTSLDISGNGIGDKGVKSISEMKQLTSLDISGNGIGDEGAKFISEMKQLKLL 271
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWT--GVTKLPNISSLECLNLSFI--QQVGAETD 249
D+ G+++ + G+ + +L+ LN+ GV + +IS ++ L +I Q+G E
Sbjct: 272 DIGGNEIGDEGSKYISEMKQLTSLNIYNNEIGVEGVKSISEMKQLTSLYIYNNQIGVE-- 329
Query: 250 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 309
+ ++ + L+ LN+ ++ D + +S K+LI L++ + D + +S +
Sbjct: 330 ---GVKSISEMKQLKSLNICYNEIGDKGVKFISEMKQLISLNIGGNGIGDEGVKSISEMK 386
Query: 310 KLTNLSI 316
+LT+L+I
Sbjct: 387 QLTSLNI 393
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/273 (18%), Positives = 117/273 (42%), Gaps = 27/273 (9%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
+ AE ++ + L SL++ + ++ M L L++ ++ D G K +
Sbjct: 38 IGAEGAKFISEMKQLTSLDIG-GNEIGDEGSKYISEMKQLTSLNIDNN-RIGDEGAKSIS 95
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
+ L L ++ + +G +S ++ L+ LD+ G + D ++ + + +L+ LD+ G
Sbjct: 96 EMKQLTSLSINNNEIGVEGAKSISEMKQLTSLDISGNGIGDKGVKFISEMKQLKLLDIGG 155
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTAL 257
+++ + G+ + +L+ LN+ ++G E + ++
Sbjct: 156 NEIGDEGSKYISEMKQLTSLNIGEN--------------------RIGDE-----GVKSI 190
Query: 258 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 317
+ L L++ ++ D +S K+L L + + D + +S + +LT+L I
Sbjct: 191 SEMKQLTSLSIYNNRIGDEGAKSISEMKQLTSLDISGNGIGDKGVKSISEMKQLTSLDIS 250
Query: 318 DAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 350
+ + G + LKLLD+ G + E +
Sbjct: 251 GNGIGDEGAKFISEMKQLKLLDIGGNEIGDEGS 283
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 117/278 (42%), Gaps = 29/278 (10%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADC-RRVTSSALWALTGMTCLKELDLSRCVKVTDAG 132
GEN + E + + L SL++ C R+ + ++ M L LD+ ++ D G
Sbjct: 10 GENQIGDEGAKSISEMKQLTSLDI--CYSRIGAEGAKFISEMKQLTSLDIGGN-EIGDEG 66
Query: 133 MKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 192
K++ + L L + + +G +S ++ L+ L + + +S+ + +L
Sbjct: 67 SKYISEMKQLTSLNIDNNRIGDEGAKSISEMKQLTSLSINNNEIGVEGAKSISEMKQLTS 126
Query: 193 LDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVL 252
LD+ G+ + ++G + +L L++ ++G E +
Sbjct: 127 LDISGNGIGDKGVKFISEMKQLKLLDIGGN--------------------EIGDEGSKYI 166
Query: 253 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 312
S + L LN+ + ++ D + +S K+L LS+ N + D +S + +LT
Sbjct: 167 S-----EMKQLTSLNIGENRIGDEGVKSISEMKQLTSLSIYNNRIGDEGAKSISEMKQLT 221
Query: 313 NLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 350
+L I + + G+ S + L LD+ G + E A
Sbjct: 222 SLDISGNGIGDKGVKSISEMKQLTSLDISGNGIGDEGA 259
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/289 (18%), Positives = 129/289 (44%), Gaps = 14/289 (4%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + E + + L SL+++ + + ++ M LK LD+ ++ D G K+
Sbjct: 108 NEIGVEGAKSISEMKQLTSLDIS-GNGIGDKGVKFISEMKQLKLLDIGGN-EIGDEGSKY 165
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ + L L + E + +G+ +S ++ L+ L + + D +S+ + +L LD+
Sbjct: 166 ISEMKQLTSLNIGENRIGDEGVKSISEMKQLTSLSIYNNRIGDEGAKSISEMKQLTSLDI 225
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSFIQQVGAETDL 250
G+ + ++G + +L+ L+++ G+ + + L+ L++ ++G E
Sbjct: 226 SGNGIGDKGVKSISEMKQLTSLDISGNGIGDEGAKFISEMKQLKLLDIGG-NEIGDEGSK 284
Query: 251 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 310
+S + L LN+ ++ + +S K+L L + N + + +S + +
Sbjct: 285 YIS-----EMKQLTSLNIYNNEIGVEGVKSISEMKQLTSLYIYNNQIGVEGVKSISEMKQ 339
Query: 311 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHP 359
L +L+I + + G+ + L L++ GG + ++ + +M
Sbjct: 340 LKSLNICYNEIGDKGVKFISEMKQLISLNI-GGNGIGDEGVKSISEMKQ 387
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 80/188 (42%), Gaps = 25/188 (13%)
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT 222
++ L +LD+G + D +S+ + +L LD+ S++ GA + +L+ L++
Sbjct: 1 MKQLKLLDIGENQIGDEGAKSISEMKQLTSLDICYSRIGAEGAKFISEMKQLTSLDIGGN 60
Query: 223 GVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 282
++G E +S + L LN++ ++ D +S
Sbjct: 61 --------------------EIGDEGSKYIS-----EMKQLTSLNIDNNRIGDEGAKSIS 95
Query: 283 TFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 342
K+L LS+ N + +S + +LT+L I + + G+ + LKLLD+ G
Sbjct: 96 EMKQLTSLSINNNEIGVEGAKSISEMKQLTSLDISGNGIGDKGVKFISEMKQLKLLDIGG 155
Query: 343 GWLLTEDA 350
+ E +
Sbjct: 156 NEIGDEGS 163
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/170 (18%), Positives = 80/170 (47%), Gaps = 7/170 (4%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N + E Y+ + L SLN+ + + + +++ M L L + ++ G+
Sbjct: 274 GGNEIGDEGSKYISEMKQLTSLNIYN-NEIGVEGVKSISEMKQLTSLYIYNN-QIGVEGV 331
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
K + + L+ L + + G+ +S ++ L L++GG + D ++S+ + +L L
Sbjct: 332 KSISEMKQLKSLNICYNEIGDKGVKFISEMKQLISLNIGGNGIGDEGVKSISEMKQLTSL 391
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNL 238
++ +++ G+ + +L+ L++ + GV + + L+ L++
Sbjct: 392 NISKNRIGAEGSKFISEMKQLTSLDICYNEIGGEGVKSISEMKQLKSLSI 441
>gi|46446665|ref|YP_008030.1| hypothetical protein pc1031 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400306|emb|CAF23755.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 553
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 170/341 (49%), Gaps = 28/341 (8%)
Query: 30 QRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWM--AYLG 87
+R L RL +L +++ L+ + + H + IE N D ++ A+L
Sbjct: 156 RRCQLNRLKNYLEFTVVSALLNQTSQLAEFKRIINHFLKKIETL--NFSDNAYLTDAHLL 213
Query: 88 AFRYLRSLNVADCRR---VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEK 144
A + +L V C++ VT + L LT +T L+ LDLS C +TD G+ HL ++ L+
Sbjct: 214 ALKDCENLKVLHCKKCWGVTDAGLAHLTPLTALQRLDLSYCENLTDDGLAHLTPLTALQH 273
Query: 145 LWLSET-GLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDL---WGSQ 199
L LS LT DG+A L+ L+ L L L +TD L L LT L++LDL W +
Sbjct: 274 LDLSYCENLTDDGLAHLAPLKALQRLALTNCKNLTDAGLTHLTTLTALQHLDLSQYW--K 331
Query: 200 VSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSFIQQVGAETDLVLS 253
+++ G A LK L L+L+ G+ L +++L+ L+LS Q TD
Sbjct: 332 LTDAGLAHLKPLTALQHLDLSLCYYLTDAGIAHLKPLTALQHLDLS---QYRNLTD--AG 386
Query: 254 LTALQNLNHLERLNLEQTQ-VSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKL 311
L L L L+ LNL + ++DA L L+ L HL+L + +LTD L L L+ L
Sbjct: 387 LAHLTPLMGLQYLNLSACKNLTDAGLAHLAPLTALQHLNLSSCYNLTDAGLVHLIPLTAL 446
Query: 312 TNLSIRD-AVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 351
+L + D LT++GL P +L+ L+L LT+D +
Sbjct: 447 QHLYLSDWENLTDTGLAHLAPLTALQHLNLSNCRKLTDDGL 487
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 151/323 (46%), Gaps = 42/323 (13%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+A+L L+ L+++ C +T L LT +T L+ LDLS C +TD G+ HL + L
Sbjct: 237 LAHLTPLTALQRLDLSYCENLTDDGLAHLTPLTALQHLDLSYCENLTDDGLAHLAPLKAL 296
Query: 143 EKLWLSET-GLTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDL-WGSQ 199
++L L+ LT G+ L++L L LDL +TD L L+ LT L++LDL
Sbjct: 297 QRLALTNCKNLTDAGLTHLTTLTALQHLDLSQYWKLTDAGLAHLKPLTALQHLDLSLCYY 356
Query: 200 VSNRGAAVLKMFPRLSFL------NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLS 253
+++ G A LK L L NL G+ L + L+ LNLS + + TD L+
Sbjct: 357 LTDAGIAHLKPLTALQHLDLSQYRNLTDAGLAHLTPLMGLQYLNLSACKNL---TDAGLA 413
Query: 254 ----LTALQNLN-------------HLERLNLEQ-------TQVSDATLFPLSTFKELIH 289
LTALQ+LN HL L Q ++D L L+ L H
Sbjct: 414 HLAPLTALQHLNLSSCYNLTDAGLVHLIPLTALQHLYLSDWENLTDTGLAHLAPLTALQH 473
Query: 290 LSLRNA-SLTDVSLHQLSSLSKLTNLSIR-DAVLTNSGLGSFKPPRSLKLLDLHGGWLLT 347
L+L N LTD L L SL LT+L + T+ GL P L+ L L + LT
Sbjct: 474 LNLSNCRKLTDDGLAHLKSLVTLTHLDLSWCKNFTDEGLTHLTPLTGLQYLVLSLCYHLT 533
Query: 348 EDAILQFCKMHPRIEVWHELSVI 370
+D + +F + V H L +I
Sbjct: 534 DDGLARF----KTLAVSHNLKII 552
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 81/148 (54%), Gaps = 4/148 (2%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N DA +A+L L+ LN++ C+ +T + L L +T L+ L+LS C +TDAG+ H
Sbjct: 381 NLTDA-GLAHLTPLMGLQYLNLSACKNLTDAGLAHLAPLTALQHLNLSSCYNLTDAGLVH 439
Query: 136 LLSISTLEKLWLSE-TGLTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYL 193
L+ ++ L+ L+LS+ LT G+A L+ L L L+L +TD L L+ L L +L
Sbjct: 440 LIPLTALQHLYLSDWENLTDTGLAHLAPLTALQHLNLSNCRKLTDDGLAHLKSLVTLTHL 499
Query: 194 DL-WGSQVSNRGAAVLKMFPRLSFLNLA 220
DL W ++ G L L +L L+
Sbjct: 500 DLSWCKNFTDEGLTHLTPLTGLQYLVLS 527
>gi|406834160|ref|ZP_11093754.1| ribonuclease inhibitor [Schlesneria paludicola DSM 18645]
Length = 390
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 130/240 (54%), Gaps = 3/240 (1%)
Query: 102 RVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLS 161
++T + L L+ + L++LDLSR K++DAG++HL ++ L +L ++ET +T G A L+
Sbjct: 125 KITDAGLKYLSSVPRLQKLDLSR-TKISDAGLEHLQTLVNLCELTIAETSVTDAGTAKLA 183
Query: 162 SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW 221
L+NL VL++ VTD L+ + + L L L G +++ G A LK L+FL+L
Sbjct: 184 GLKNLRVLNVSKTNVTDTSLKVISEIPNLNTLILDGCNLTDVGLASLKDCQSLTFLSLDG 243
Query: 222 TGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPL 281
+T + L+ + L ++ ++ D + + L +L+ L+LE V DA++ +
Sbjct: 244 IPLTG-SFLKELKGIPLEYLTLANSKCDGT-TFKDVGTLKNLKMLSLENCPVEDASIASI 301
Query: 282 STFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 341
+ L LSL N +T+ ++ +L + L +LSI ++ L K +LKL+ H
Sbjct: 302 AAIASLETLSLDNTKITEQAIVELKDMPSLVSLSINSTPISAEELRQLKATPNLKLVKAH 361
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 11/159 (6%)
Query: 189 KLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSFIQQ 243
+++ + L S + + AVLK P+L L+L T +T L ++ L+ L+LS +
Sbjct: 91 EVDQITLDQSPIGDDDLAVLKQTPQLVGLSLRATKITDAGLKYLSSVPRLQKLDLSRTKI 150
Query: 244 VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLH 303
A L LQ L +L L + +T V+DA L+ K L L++ ++TD SL
Sbjct: 151 SDA------GLEHLQTLVNLCELTIAETSVTDAGTAKLAGLKNLRVLNVSKTNVTDTSLK 204
Query: 304 QLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 342
+S + L L + LT+ GL S K +SL L L G
Sbjct: 205 VISEIPNLNTLILDGCNLTDVGLASLKDCQSLTFLSLDG 243
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 101/223 (45%), Gaps = 30/223 (13%)
Query: 145 LWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG 204
L L T +T G+ LSS+ L LDL ++D L LQ L L L + + V++ G
Sbjct: 119 LSLRATKITDAGLKYLSSVPRLQKLDLSRTKISDAGLEHLQTLVNLCELTIAETSVTDAG 178
Query: 205 AAVLKMFPRLSFLNLAWTGVT--------KLPNISSL----------------ECLNLSF 240
A L L LN++ T VT ++PN+++L +C +L+F
Sbjct: 179 TAKLAGLKNLRVLNVSKTNVTDTSLKVISEIPNLNTLILDGCNLTDVGLASLKDCQSLTF 238
Query: 241 IQQVGAETDLVLSLTALQNLNH--LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLT 298
+ G + L+ + L+ L LE L L ++ T + T K L LSL N +
Sbjct: 239 LSLDG----IPLTGSFLKELKGIPLEYLTLANSKCDGTTFKDVGTLKNLKMLSLENCPVE 294
Query: 299 DVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 341
D S+ +++++ L LS+ + +T + K SL L ++
Sbjct: 295 DASIASIAAIASLETLSLDNTKITEQAIVELKDMPSLVSLSIN 337
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 80/189 (42%), Gaps = 25/189 (13%)
Query: 142 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVS 201
++++ L ++ + D +A+L L L L +TD L+ L + +L+ LDL +++S
Sbjct: 92 VDQITLDQSPIGDDDLAVLKQTPQLVGLSLRATKITDAGLKYLSSVPRLQKLDLSRTKIS 151
Query: 202 NRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLN 261
+ G L+ L L +A T VT L L
Sbjct: 152 DAGLEHLQTLVNLCELTIAETSVTD-------------------------AGTAKLAGLK 186
Query: 262 HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVL 321
+L LN+ +T V+D +L +S L L L +LTDV L L LT LS+ L
Sbjct: 187 NLRVLNVSKTNVTDTSLKVISEIPNLNTLILDGCNLTDVGLASLKDCQSLTFLSLDGIPL 246
Query: 322 TNSGLGSFK 330
T S L K
Sbjct: 247 TGSFLKELK 255
>gi|406831735|ref|ZP_11091329.1| hypothetical protein SpalD1_08854 [Schlesneria paludicola DSM
18645]
Length = 422
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 141/305 (46%), Gaps = 39/305 (12%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
+ + + LG ++LR L V D R +T L L + L EL +S VTD G+K
Sbjct: 88 ITEDGLRELGQLKFLRRL-VVDGRSITDEGLMELVDLRSLTELTIS-ATSVTDEGLKQFQ 145
Query: 138 S-------ISTLE--------------------KLWLSETGLTADG-IALLSSLQNLSVL 169
S +S LE ++ L DG I L SL++L L
Sbjct: 146 SFLPQLRILSDLESVRRLAGFGGEIERSDGRVIRISLHNKPQFGDGDIESLMSLRHLESL 205
Query: 170 DLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT--GVTKL 227
DLGG +TD L ++ L KL L L +++++RG L+ +LS L+L+ T G L
Sbjct: 206 DLGGTSITDGALLTVGRLQKLIQLQLPSTRITDRGLKALRNLKQLSILDLSRTRIGDVGL 265
Query: 228 PNISSLECLNLSFIQ-QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 286
I L +L QV TD L ALQ+L ++ L L + ++D L L F+
Sbjct: 266 DEIKKLPLTSLMLHDTQV---TDF--GLLALQDLKEVQFLGLYKCAITDTGLVTLGRFQN 320
Query: 287 LIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLL 346
L L L + +TD L + L KL L + D+ +T++GL + +L L L G +
Sbjct: 321 LSELCLNSTRITDGGLRNVGQLRKLRILQLGDSQITDAGLLELRHLNNLVGLVLRGTR-V 379
Query: 347 TEDAI 351
T+D++
Sbjct: 380 TDDSV 384
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 96/236 (40%), Gaps = 49/236 (20%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC-- 125
E+++L G + D + +G + L L + R +T L AL + L LDLSR
Sbjct: 203 ESLDLGGTSITDGALLT-VGRLQKLIQLQLPSTR-ITDRGLKALRNLKQLSILDLSRTRI 260
Query: 126 --------------------VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQN 165
+VTD G+ L + ++ L L + +T G+ L QN
Sbjct: 261 GDVGLDEIKKLPLTSLMLHDTQVTDFGLLALQDLKEVQFLGLYKCAITDTGLVTLGRFQN 320
Query: 166 LSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 225
LS L L +TD LR++ L KL L L SQ+++ G L+ L L L T VT
Sbjct: 321 LSELCLNSTRITDGGLRNVGQLRKLRILQLGDSQITDAGLLELRHLNNLVGLVLRGTRVT 380
Query: 226 KLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPL 281
D V +L QNL H++ L QT ++A + L
Sbjct: 381 D----------------------DSVNTLKRYQNLVHID---LRQTGFTEAGVTEL 411
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 29/210 (13%)
Query: 159 LLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN 218
LL SL NL+ LD+ + +T+ LR L L L L + G +++ G L L+ L
Sbjct: 71 LLKSLPNLTSLDVSAIVITEDGLRELGQLKFLRRLVVDGRSITDEGLMELVDLRSLTELT 130
Query: 219 LAWTGVTK---------LPN---ISSLECLN--LSFIQQVGAETDLVLSLT--------- 255
++ T VT LP +S LE + F ++ V+ ++
Sbjct: 131 ISATSVTDEGLKQFQSFLPQLRILSDLESVRRLAGFGGEIERSDGRVIRISLHNKPQFGD 190
Query: 256 ----ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+L +L HLE L+L T ++D L + ++LI L L + +TD L L +L +L
Sbjct: 191 GDIESLMSLRHLESLDLGGTSITDGALLTVGRLQKLIQLQLPSTRITDRGLKALRNLKQL 250
Query: 312 TNLSIRDAVLTNSGLGSFK--PPRSLKLLD 339
+ L + + + GL K P SL L D
Sbjct: 251 SILDLSRTRIGDVGLDEIKKLPLTSLMLHD 280
>gi|255583092|ref|XP_002532313.1| protein binding protein, putative [Ricinus communis]
gi|223527982|gb|EEF30065.1| protein binding protein, putative [Ricinus communis]
Length = 597
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 142/329 (43%), Gaps = 47/329 (14%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N ++ + N+V AE M + L L++ C ++ L L G+ L+ L++ C
Sbjct: 181 NLTSLSFKRCNAVTAEGMRGFSSLVNLEKLDLERCPQI-HGGLAHLKGLLKLESLNIRCC 239
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+ D MK L I+ L++L +S + +T G++ L LQ L +L+L G VT L S+
Sbjct: 240 KCIEDMDMKALSDITNLKELQISNSNVTDLGVSYLKGLQKLIMLNLEGCNVTTACLDSIS 299
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSF 240
L L YL+L +S+ G + L L+L + +T L + +LE LNL
Sbjct: 300 ALVALTYLNLNRCNLSDDGCSKFSGLKNLKVLSLGFNNITDACLVHLKGLMNLENLNLDS 359
Query: 241 IQ----------------------QVGAETDLVLS-LTALQNLN---------------- 261
+VG+ LS LT L+NLN
Sbjct: 360 CNIGDEGLANLTGLPLKSLELSDTEVGSNGLRHLSGLTLLENLNLSFTLVTDSGLRRLSG 419
Query: 262 --HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 319
L LNL+ Q++DA L L+ LIHL L A ++D L L +L I
Sbjct: 420 LLSLRSLNLDARQITDAGLAALTRLTGLIHLDLFGARISDSGTKYLQYFKNLQSLEICGG 479
Query: 320 VLTNSGLGSFKPPRSLKLLDLHGGWLLTE 348
LT+ G+ + K L +L+L LT+
Sbjct: 480 GLTDDGVKNIKDLVHLTVLNLSQNSNLTD 508
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 123/252 (48%), Gaps = 29/252 (11%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N++ + +L L +LN+ C + L LTG+ LK L+LS +V G+
Sbjct: 334 GFNNITDACLVHLKGLMNLENLNLDSCN-IGDEGLANLTGLP-LKSLELSD-TEVGSNGL 390
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
+HL ++ LE L LS T +T G+ LS L +L L+L +TD L +L LT L +L
Sbjct: 391 RHLSGLTLLENLNLSFTLVTDSGLRRLSGLLSLRSLNLDARQITDAGLAALTRLTGLIHL 450
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLS 253
DL+G+++S+ G L+ F L L + G+T V DLV
Sbjct: 451 DLFGARISDSGTKYLQYFKNLQSLEICGGGLTD---------------DGVKNIKDLV-- 493
Query: 254 LTALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 312
HL LNL Q + ++D TL +S EL+ L++ N+ +T+ LH L L L
Sbjct: 494 --------HLTVLNLSQNSNLTDKTLELISGLTELVSLNVSNSLITNEGLHYLKPLKNLR 545
Query: 313 NLSIRDAVLTNS 324
+LS+ +T S
Sbjct: 546 SLSLESCKVTAS 557
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 142/351 (40%), Gaps = 58/351 (16%)
Query: 22 ESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGEN-SVDA 80
E + K+ + LP L+ + L+ + + LE F+ A L GE V
Sbjct: 65 EDIDKYS----TFSMLPRDLSQQIFNELVISHCLTDATLEAFRDCALQDILLGEYPGVKD 120
Query: 81 EWM-------------------------AYLGAFRYLRSLNVADCRRVTSSALWALTGMT 115
WM A L A L+++ + C ++ L ++G+
Sbjct: 121 SWMDIVSSQGSSLLSVDLSDSDVTDTGLALLQACSSLQTMILNRCDCISECGLKHISGLK 180
Query: 116 CLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP 175
L L RC VT GM+ S+ LEKL L G+A L L L L++
Sbjct: 181 NLTSLSFKRCNAVTAEGMRGFSSLVNLEKLDLERCPQIHGGLAHLKGLLKLESLNIRCCK 240
Query: 176 -VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLE 234
+ D+ +++L +T L+ L + S V++ G + LK +L LNL VT
Sbjct: 241 CIEDMDMKALSDITNLKELQISNSNVTDLGVSYLKGLQKLIMLNLEGCNVTT-------A 293
Query: 235 CLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 294
CL+ S++AL L + LNL + +SD S K L LSL
Sbjct: 294 CLD---------------SISALVALTY---LNLNRCNLSDDGCSKFSGLKNLKVLSLGF 335
Query: 295 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK--PPRSLKLLDLHGG 343
++TD L L L L NL++ + + GL + P +SL+L D G
Sbjct: 336 NNITDACLVHLKGLMNLENLNLDSCNIGDEGLANLTGLPLKSLELSDTEVG 386
>gi|46446916|ref|YP_008281.1| hypothetical protein pc1282 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400557|emb|CAF24006.1| conserved hypothetical protein [Candidatus Protochlamydia amoebophila
UWE25]
Length = 1082
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 106/342 (30%), Positives = 157/342 (45%), Gaps = 28/342 (8%)
Query: 30 QRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAF 89
Q+ L L ++L DSLL + F +L+ F + E + + + L
Sbjct: 734 QQYRLNVLKSYLVDSLLNQ-TSQLTEFEKVLKYFSNEIEELNFSKNIFLTDAHLLALKNC 792
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL---W 146
+ L++L++ +C +T + L LT + L+ LDLS C TDAG+ HL + L L W
Sbjct: 793 KNLKALHLQECPNLTDAGLAHLTSLVTLQHLDLSYCSNFTDAGLAHLRPLVALTHLNLRW 852
Query: 147 LSETGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDL-WGSQVSNRG 204
LT G+A L+ L L LDL TD L L L L++LDL S ++ G
Sbjct: 853 CR--NLTDAGLAHLTPLVALKYLDLSYCSNFTDAGLTHLTPLVTLQHLDLSCCSNFTDAG 910
Query: 205 AAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSFIQQVGAETDLVLS----L 254
A L+ L+ LNL W G+ L + +L+ LNL+ ++ TD L+ L
Sbjct: 911 LAHLRPLVALTHLNLRWCHNFTDAGLAHLTPLVALQHLNLNLCWKL---TDAGLAHLRPL 967
Query: 255 TALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTN 313
ALQNL+ N +DA L L+ L HL L + LTD L L+ L L +
Sbjct: 968 VALQNLDLSYCSNF-----TDAGLAHLTPLVVLQHLDLSSCKKLTDAGLAHLTPLVALQH 1022
Query: 314 LSIR-DAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQF 354
L + LT++GL P +L+ L L+ TE + F
Sbjct: 1023 LDLSWCNHLTDAGLRHLTPLLALQDLYLYSCENFTEVGLAHF 1064
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 127/278 (45%), Gaps = 39/278 (14%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N DA +A+L L LN+ CR +T + L LT + LK LDLS C TDAG+ H
Sbjct: 830 NFTDA-GLAHLRPLVALTHLNLRWCRNLTDAGLAHLTPLVALKYLDLSYCSNFTDAGLTH 888
Query: 136 LLSISTLEKLWLS-ETGLTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYL 193
L + TL+ L LS + T G+A L L L+ L+L TD L L L L++L
Sbjct: 889 LTPLVTLQHLDLSCCSNFTDAGLAHLRPLVALTHLNLRWCHNFTDAGLAHLTPLVALQHL 948
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAW----TGVTKLPNISSLECLNLSFIQQVGAETD 249
+ LNL W G+ L + +L+ L+LS+ TD
Sbjct: 949 N----------------------LNLCWKLTDAGLAHLRPLVALQNLDLSYCSNF---TD 983
Query: 250 LVLS-LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSS 307
L+ LT L L HL+ + + +++DA L L+ L HL L + LTD L L+
Sbjct: 984 AGLAHLTPLVVLQHLDLSSCK--KLTDAGLAHLTPLVALQHLDLSWCNHLTDAGLRHLTP 1041
Query: 308 LSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGW 344
L L +L + T GL FK S+ L L+ W
Sbjct: 1042 LLALQDLYLYSCENFTEVGLAHFK--SSVASLHLNLKW 1077
>gi|217074604|gb|ACJ85662.1| unknown [Medicago truncatula]
Length = 331
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 13/274 (4%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
M + F L+ L +++ +T + L G+ L L++ C +T A +++ +++ L
Sbjct: 1 MKAISGFINLKELQISN-SSITDLGISYLRGLQKLSTLNVEGC-SITAACFEYISALAAL 58
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
L L+ GL+ DG S L L L L +TD L L+ LTKLEYL+L Q+ +
Sbjct: 59 ACLNLNRCGLSDDGFEKFSGLTGLKRLSLAFNKITDACLVHLKGLTKLEYLNLDSCQIGD 118
Query: 203 RGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSFIQQVGAETDLVLSLTAL 257
G L L L L+ T G+ + ++ LE LNLSF +L LT
Sbjct: 119 EGLVNLTGLTLLKSLVLSDTEVGNSGIRYISGLNKLEDLNLSFTSVTDNGLKRLLGLT-- 176
Query: 258 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 317
+L+ LNL+ Q++DA L L++ LI L L A +TD L S L +L I
Sbjct: 177 ----NLKSLNLDARQITDAGLANLTSLSGLITLDLFGARITDSGTTYLRSFKNLQSLEIC 232
Query: 318 DAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 351
+LT++G+ + + SL L+L LT+ +
Sbjct: 233 GGLLTDAGVKNIREIVSLTQLNLSQNCKLTDKTL 266
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 117/237 (49%), Gaps = 12/237 (5%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + + +L L LN+ C+ + L LTG+T LK L LS +V ++G+++
Sbjct: 90 NKITDACLVHLKGLTKLEYLNLDSCQ-IGDEGLVNLTGLTLLKSLVLSD-TEVGNSGIRY 147
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ ++ LE L LS T +T +G+ L L NL L+L +TD L +L L+ L LDL
Sbjct: 148 ISGLNKLEDLNLSFTSVTDNGLKRLLGLTNLKSLNLDARQITDAGLANLTSLSGLITLDL 207
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAW-----TGVTKLPNISSLECLNLSFIQQVGAETDL 250
+G+++++ G L+ F L L + GV + I SL LNLS Q TD
Sbjct: 208 FGARITDSGTTYLRSFKNLQSLEICGGLLTDAGVKNIREIVSLTQLNLS---QNCKLTDK 264
Query: 251 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 307
L L + + L LN+ ++V++ L L K L LSL + + + +L S
Sbjct: 265 TLEL--ISGMTALRSLNVSNSRVTNEGLRYLKPLKNLRTLSLESCKVNAADIKKLHS 319
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 117/242 (48%), Gaps = 27/242 (11%)
Query: 101 RRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALL 160
++T + L L G+T L+ L+L C ++ D G+ +L ++ L+ L LS+T + GI +
Sbjct: 90 NKITDACLVHLKGLTKLEYLNLDSC-QIGDEGLVNLTGLTLLKSLVLSDTEVGNSGIRYI 148
Query: 161 SSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA 220
S L L L+L VTD L+ L LT L+ L+L Q+++ G A L L L+L
Sbjct: 149 SGLNKLEDLNLSFTSVTDNGLKRLLGLTNLKSLNLDARQITDAGLANLTSLSGLITLDLF 208
Query: 221 WTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFP 280
+T T L++ +L+ L + ++DA +
Sbjct: 209 GARITDSGT-------------------------TYLRSFKNLQSLEICGGLLTDAGVKN 243
Query: 281 LSTFKELIHLSL-RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 339
+ L L+L +N LTD +L +S ++ L +L++ ++ +TN GL KP ++L+ L
Sbjct: 244 IREIVSLTQLNLSQNCKLTDKTLELISGMTALRSLNVSNSRVTNEGLRYLKPLKNLRTLS 303
Query: 340 LH 341
L
Sbjct: 304 LE 305
>gi|70663921|emb|CAE02935.3| OSJNBa0014K14.7 [Oryza sativa Japonica Group]
Length = 557
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 140/309 (45%), Gaps = 24/309 (7%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N ++ + ++V AE L SL++ C ++ L L G+ L++L+L C
Sbjct: 185 NVTSLSFKKCSAVTAEGAKAFANMVNLGSLDLERCPKI-HGGLVHLKGLRKLEKLNLRYC 243
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+TD+ MKHL ++ L +L LS ++ G++ L L L+ L+L G VT L +
Sbjct: 244 NGITDSDMKHLSDLTNLRELQLSCCKISDLGVSYLRGLSKLAHLNLEGCAVTAACLEVIS 303
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLS- 239
L L L+L V + G L+ +L LNL + +T L + +LECLNL
Sbjct: 304 GLASLVLLNLSRCGVYDEGCEHLEGLVKLKVLNLGFNYITDACLVHLKELINLECLNLDS 363
Query: 240 -------------FIQQVGAETDLV--LSLTALQNLNHLERLNLEQTQVSDATLFPLST- 283
F + + AE + + + + L + EQ S + LS+
Sbjct: 364 CKIGDEGLAHLKVFHKTLKAENHTISLMQTSETKKLGTFRHRSWEQWTSSSLWMVFLSSQ 423
Query: 284 -FKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 342
L HL L A +TD + L L +L + ++T++G+ + K ++L LL+L
Sbjct: 424 GLTGLTHLDLFGARITDAGTNCLKYFKNLQSLEVCGGLITDAGVKNIKDLKALTLLNLSQ 483
Query: 343 GWLLTEDAI 351
LT+ ++
Sbjct: 484 NGNLTDKSL 492
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 140/308 (45%), Gaps = 53/308 (17%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+ +L R L LN+ C +T S + L+ +T L+EL LS C K++D G+ +L +S L
Sbjct: 226 LVHLKGLRKLEKLNLRYCNGITDSDMKHLSDLTNLRELQLS-CCKISDLGVSYLRGLSKL 284
Query: 143 EKLWLSETGLTA------------------------DGIALLSSLQNLSVLDLGGLPVTD 178
L L +TA +G L L L VL+LG +TD
Sbjct: 285 AHLNLEGCAVTAACLEVISGLASLVLLNLSRCGVYDEGCEHLEGLVKLKVLNLGFNYITD 344
Query: 179 LVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRL--------------------SFLN 218
L L+ L LE L+L ++ + G A LK+F + +F +
Sbjct: 345 ACLVHLKELINLECLNLDSCKIGDEGLAHLKVFHKTLKAENHTISLMQTSETKKLGTFRH 404
Query: 219 LAWTGVTK----LPNISSLECLNLSFIQQVGAE-TDLVLSLTALQNLNHLERLNLEQTQV 273
+W T + +SS L+ + GA TD L+ +L+ L + +
Sbjct: 405 RSWEQWTSSSLWMVFLSSQGLTGLTHLDLFGARITDA--GTNCLKYFKNLQSLEVCGGLI 462
Query: 274 SDATLFPLSTFKELIHLSL-RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPP 332
+DA + + K L L+L +N +LTD SL +S L+ L +L++ ++ ++NSGL KP
Sbjct: 463 TDAGVKNIKDLKALTLLNLSQNGNLTDKSLELISRLTALVSLNVSNSRVSNSGLHHLKPL 522
Query: 333 RSLKLLDL 340
++L+ L L
Sbjct: 523 QNLRSLSL 530
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 123/286 (43%), Gaps = 56/286 (19%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
++YL L LN+ C VT++ L ++G+ L L+LSRC V D G +HL + L
Sbjct: 275 VSYLRGLSKLAHLNLEGCA-VTAACLEVISGLASLVLLNLSRC-GVYDEGCEHLEGLVKL 332
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTD------------------------ 178
+ L L +T + L L NL L+L + D
Sbjct: 333 KVLNLGFNYITDACLVHLKELINLECLNLDSCKIGDEGLAHLKVFHKTLKAENHTISLMQ 392
Query: 179 ------------------------LVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRL 214
+V S Q LT L +LDL+G+++++ G LK F L
Sbjct: 393 TSETKKLGTFRHRSWEQWTSSSLWMVFLSSQGLTGLTHLDLFGARITDAGTNCLKYFKNL 452
Query: 215 SFLNLAWTGVTK--LPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ 272
L + +T + NI L+ L L + Q G TD L L + L L LN+ ++
Sbjct: 453 QSLEVCGGLITDAGVKNIKDLKALTLLNLSQNGNLTDKSLEL--ISRLTALVSLNVSNSR 510
Query: 273 VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL-SIR 317
VS++ L L + L LSL + +T + + +L L+ L NL S+R
Sbjct: 511 VSNSGLHHLKPLQNLRSLSLESCKVTAIEIKKL-QLAALPNLVSVR 555
>gi|14423508|gb|AAK62436.1|AF386991_1 Unknown protein [Arabidopsis thaliana]
gi|20148357|gb|AAM10069.1| unknown protein [Arabidopsis thaliana]
Length = 332
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 122/253 (48%), Gaps = 12/253 (4%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
M L LRSL + C ++T + L G+ L L+L C VT A + L +++ L
Sbjct: 1 MEPLSVLTNLRSLQIC-CSKITDIGISYLKGLNKLNLLNLEGCRHVTAACLDTLTALAGL 59
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
L L+ + G S L NL +L+LG +T+ L L+ LTKLE L+L ++ +
Sbjct: 60 MYLNLNRCNFSDSGCEKFSDLINLKILNLGMNNITNSCLVHLKGLTKLESLNLDSCRIGD 119
Query: 203 RGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSFIQQVGAETDLVLSLTAL 257
G L L L L+ T G+ L +S+LE +NLSF + L L
Sbjct: 120 EGLVHLSGMLELKSLELSDTEVGSNGLRHLSGLSNLESINLSFTVVTDS------GLRKL 173
Query: 258 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 317
L L LNL+ V+DA L L++ L HL L A +TD + L +L KL +L I
Sbjct: 174 SGLTSLRTLNLDARHVTDAGLSALTSLTGLTHLDLFGARITDSGTNHLRNLKKLQSLEIC 233
Query: 318 DAVLTNSGLGSFK 330
LT++G+ + K
Sbjct: 234 GGGLTDTGVKNIK 246
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 83/152 (54%), Gaps = 2/152 (1%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N++ + +L L SLN+ CR + L L+GM LK L+LS +V G+
Sbjct: 89 GMNNITNSCLVHLKGLTKLESLNLDSCR-IGDEGLVHLSGMLELKSLELSD-TEVGSNGL 146
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
+HL +S LE + LS T +T G+ LS L +L L+L VTD L +L LT L +L
Sbjct: 147 RHLSGLSNLESINLSFTVVTDSGLRKLSGLTSLRTLNLDARHVTDAGLSALTSLTGLTHL 206
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 225
DL+G+++++ G L+ +L L + G+T
Sbjct: 207 DLFGARITDSGTNHLRNLKKLQSLEICGGGLT 238
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 122/254 (48%), Gaps = 35/254 (13%)
Query: 101 RRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALL 160
+T+S L L G+T L+ L+L C ++ D G+ HL + L+ L LS+T + ++G+ L
Sbjct: 91 NNITNSCLVHLKGLTKLESLNLDSC-RIGDEGLVHLSGMLELKSLELSDTEVGSNGLRHL 149
Query: 161 SSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA 220
S L NL ++L VTD LR L LT L L+L V++ G + L L+ L+L
Sbjct: 150 SGLSNLESINLSFTVVTDSGLRKLSGLTSLRTLNLDARHVTDAGLSALTSLTGLTHLDLF 209
Query: 221 W-----TGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
+G L N+ L+ L + G TD T ++N + D
Sbjct: 210 GARITDSGTNHLRNLKKLQSLEICG----GGLTD-----TGVKN-------------IKD 247
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSL 335
+ L + N++LTD +L +S L+ L +L++ ++ +++SGL KP ++L
Sbjct: 248 LSSLTLLNLSQ-------NSNLTDKTLELISGLTGLVSLNVSNSRVSSSGLRHLKPLKNL 300
Query: 336 KLLDLHGGWLLTED 349
+ L L L D
Sbjct: 301 RSLTLESCKLSAND 314
>gi|46447197|ref|YP_008562.1| hypothetical protein pc1563 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400838|emb|CAF24287.1| hypothetical protein pc1563 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 380
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 127/248 (51%), Gaps = 19/248 (7%)
Query: 30 QRRSLERLPAHLADSLLRHLIRRRLI---FPSLLEVFKHNAEAIELRGENSVDAEWMAYL 86
Q+ L L +L +++ L+++ F +L F + E + + S+ + L
Sbjct: 121 QQYQLNALKNYLELTVVSSLLKQAFYLTKFEKILNHFSNEIEGLNFSEKYSLTDTHLLAL 180
Query: 87 GAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLW 146
+ L+ L++ DC +T + L L + L+ L+L+ C K+TDAG+ HL + L+ L
Sbjct: 181 KNCKNLKELHLQDCYMLTDAGLAHLASLVALQHLNLAGCRKLTDAGLAHLTPLVVLQYLS 240
Query: 147 LSET-GLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDL-WGSQVSNR 203
L+ LT G+A L+ L L LDL G P +T + L L+ L L++L+L W ++++
Sbjct: 241 LAGCDNLTDAGLAHLTPLVALQHLDLNGCPNLTGVGLAHLKPLVALQHLNLSWCDKLTDA 300
Query: 204 GAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSFIQQVGAETDLVLS---- 253
G A LK L +LNLA G+ L + +L+ L+L+ + TD+ L+
Sbjct: 301 GLAHLKPLVALHYLNLAGCDKLTDAGLVHLMPLVTLQHLDLTACSNL---TDVGLAHLKP 357
Query: 254 LTALQNLN 261
L ALQ+LN
Sbjct: 358 LVALQHLN 365
>gi|330842680|ref|XP_003293301.1| hypothetical protein DICPUDRAFT_158109 [Dictyostelium purpureum]
gi|325076385|gb|EGC30175.1| hypothetical protein DICPUDRAFT_158109 [Dictyostelium purpureum]
Length = 684
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 160/388 (41%), Gaps = 88/388 (22%)
Query: 41 LADSLLRHLI-----RRRLIFPSLLEVFKHNAEAIELRGENS---VDAEWMAYLGAFRYL 92
L+ L+RHLI RL L ++ +L N V+ +++ FRYL
Sbjct: 253 LSGDLIRHLIEVMAKNNRLTRTKLNQILSSGVRVFKLDLSNQSLIVNNDFLH--NCFRYL 310
Query: 93 ---RSLNVADCRRVTSSALWALTGMTC---LKELDLSRCVKVTDAGMKHLLSISTLEKLW 146
+ +N ++C +T L L+ LDL +TD G K+L ++ LE+L+
Sbjct: 311 VEVQDVNFSNCINMTDYGLEVFKNEKFHRNLRVLDLRHNRNLTDVGCKNLKNLVNLEELY 370
Query: 147 LSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL---------------------- 184
L T ++ G+A L L NL LD+ +TD + ++
Sbjct: 371 LGSTSISDLGVAFLKQLVNLKTLDVSRCKITDNAMVTISLFSKLTLLNLSETQITDVAIS 430
Query: 185 ---QVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFLNLAWTGVT--------KLPNISS 232
Q+LT ++YL L Q ++N+ L F ++ L++ T ++ +LPN+
Sbjct: 431 NIHQILTNIQYLYLSNCQKLTNKSLFFLTYFSKMRLLSITGTQISLNGFVHLKRLPNLLY 490
Query: 233 LE-----CLNLSFIQQVGAETDL----------VLSLTALQNLNHLERLNLEQTQVSDAT 277
LE CLN I + + T L + S+ L NL +LE L L T+V D++
Sbjct: 491 LELPNRYCLNDQTIVYLNSLTKLKKLDLTDYTYITSIEPLDNLKYLEELLLANTRVGDSS 550
Query: 278 LFPLSTFKELIHLSLRNASLT-----------------------DVSLHQLSSLSKLTNL 314
+ + K L LSL +T D S++ LS + L L
Sbjct: 551 VPAIKKMKSLEVLSLDRTDITSAGVAGLVDLNLKSLSLMKTKIDDDSINYLSEIKSLRQL 610
Query: 315 SIRDAVLTNSGLGSFKPPRSLKLLDLHG 342
+I +T+ + K +L LDL G
Sbjct: 611 NISHNNITHKNIEKLKDITNLNSLDLRG 638
>gi|301098037|ref|XP_002898112.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262105473|gb|EEY63525.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 648
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 141/308 (45%), Gaps = 43/308 (13%)
Query: 69 AIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV 128
+ L G +VD + + L +L+SL + CRR+T + L +T L++L L RC K+
Sbjct: 255 TLNLSGCANVDDKCVKSLRQLEHLKSLQLVGCRRLTDKGVKRLFKLTKLEKLRLGRCRKL 314
Query: 129 TDAGMKHLL-SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQV 186
TD + S L +L +S L+ + + +++L VL + G ++D+ + SL
Sbjct: 315 TDDAFGGFVDSFPKLRELDVSNCRLSERAMQHIGQVKSLEVLVIRGCQDISDVGMASLAE 374
Query: 187 LTKLEYLD---------------------LWGSQVSNRGAAVLKMFPRLSFLNL------ 219
LT L+Y D L + + AAVL+ +L L L
Sbjct: 375 LTNLKYFDARHCGKIHSIPTEWTQLEVLLLGYTAFAESDAAVLQYLTKLQELELRKCRIM 434
Query: 220 --AWTGVTKLPNISSLECLNLSFIQQVGAETDLVLS--LTALQNLNHLERLNLEQTQVSD 275
+ +++L ++ LE AET L S L N +L+ LN+ T++SD
Sbjct: 435 KRGFQFISRLKHLERLEV----------AETALTDSRLLEICNNAINLKALNVSNTEISD 484
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSL 335
+ L+ KEL L L + +T+ +L LS L +L L + A +T++GL P L
Sbjct: 485 SGTTGLTKLKELRILGLDTSGITNRALANLSFLPQLERLDLFGANITDNGLMHLIPLHKL 544
Query: 336 KLLDLHGG 343
+ L + GG
Sbjct: 545 QELAICGG 552
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 145/333 (43%), Gaps = 31/333 (9%)
Query: 72 LRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDA 131
+G + E + L L +LN++ C V + +L + LK L L C ++TD
Sbjct: 233 FQGCTGLSKETIEMLKLSTKLTTLNLSGCANVDDKCVKSLRQLEHLKSLQLVGCRRLTDK 292
Query: 132 GMKHLLSISTLEKLWLSET-GLTADGI-ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK 189
G+K L ++ LEKL L LT D + S L LD+ +++ ++ + +
Sbjct: 293 GVKRLFKLTKLEKLRLGRCRKLTDDAFGGFVDSFPKLRELDVSNCRLSERAMQHIGQVKS 352
Query: 190 LEYLDLWGSQ-VSNRGAAVLKMFPRLSFLNLAWTG-VTKLPNI-SSLECLNLSFIQQVGA 246
LE L + G Q +S+ G A L L + + G + +P + LE L L + +
Sbjct: 353 LEVLVIRGCQDISDVGMASLAELTNLKYFDARHCGKIHSIPTEWTQLEVLLLGYTAFAES 412
Query: 247 ETDLVLSLTALQN------------------LNHLERLNLEQTQVSDATLFPLSTFK-EL 287
+ ++ LT LQ L HLERL + +T ++D+ L + L
Sbjct: 413 DAAVLQYLTKLQELELRKCRIMKRGFQFISRLKHLERLEVAETALTDSRLLEICNNAINL 472
Query: 288 IHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLT 347
L++ N ++D L+ L +L L + + +TN L + L+ LDL G +T
Sbjct: 473 KALNVSNTEISDSGTTGLTKLKELRILGLDTSGITNRALANLSFLPQLERLDLFGAN-IT 531
Query: 348 EDAILQFCKMHPRIEVWHELSVICPSDQIGSNG 380
++ ++ +H E+ IC + IG G
Sbjct: 532 DNGLMHLIPLHKLQEL-----AICGGN-IGDRG 558
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 119/281 (42%), Gaps = 56/281 (19%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTS--------------------SA 107
E + +RG + MA L L+ + C ++ S S
Sbjct: 354 EVLVIRGCQDISDVGMASLAELTNLKYFDARHCGKIHSIPTEWTQLEVLLLGYTAFAESD 413
Query: 108 LWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTAD------------ 155
L +T L+EL+L +C ++ G + + + LE+L ++ET LT
Sbjct: 414 AAVLQYLTKLQELELRKC-RIMKRGFQFISRLKHLERLEVAETALTDSRLLEICNNAINL 472
Query: 156 -------------GIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
G L+ L+ L +L L +T+ L +L L +LE LDL+G+ +++
Sbjct: 473 KALNVSNTEISDSGTTGLTKLKELRILGLDTSGITNRALANLSFLPQLERLDLFGANITD 532
Query: 203 RGAAVLKMFPRLSFL-----NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTAL 257
G L +L L N+ GV + ++SL LNLS + + + SL L
Sbjct: 533 NGLMHLIPLHKLQELAICGGNIGDRGVGLISKLTSLTSLNLSQNRNIRTK-----SLFYL 587
Query: 258 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLT 298
++L L LNL T +S +L LS KEL LS+ SL+
Sbjct: 588 RSLTSLRCLNLSNTGISALSLRHLSPLKELQSLSVYGCSLS 628
>gi|149174591|ref|ZP_01853217.1| hypothetical protein PM8797T_09969 [Planctomyces maris DSM 8797]
gi|148846701|gb|EDL61038.1| hypothetical protein PM8797T_09969 [Planctomyces maris DSM 8797]
Length = 346
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 121/276 (43%), Gaps = 33/276 (11%)
Query: 65 HNAEAIELRGENSVDAEWM-AYLGAFRYLRSLNVADCRR--VTSSALWALTGMTCLKELD 121
HN I G D E+ A L A L+SL + D +T S + G+ L+ L
Sbjct: 86 HNVTWISSVGYGD-DYEFTEADLAAIAQLKSLKILDFSSSLITDSDMSYFQGLYNLEALI 144
Query: 122 LSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVL 181
L R + DAG+ HL + L+ L L ET +T G++ L L L+ L+L ++D L
Sbjct: 145 LERT-SIGDAGLYHLRDLRKLKVLRLWETDVTDVGLSYLKDLTELTYLNLSETKISDAGL 203
Query: 182 RSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFI 241
L+ + L+ L L +QVS+RG LK P+L L+L VT + EC N
Sbjct: 204 IHLKGMLNLQTLYLDATQVSDRGLIYLKELPKLETLDLLDAEVTDAGLVHLSECRN---- 259
Query: 242 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 301
L++L L TQ+SD L L KEL L +R + +D
Sbjct: 260 ---------------------LKKLTLADTQISDQGLVYLGKLKELHELDIRYTNTSDAG 298
Query: 302 LHQLSSLSKLTNLSIRDAVLTNSG---LGSFKPPRS 334
L L L L L+ +T++G L F P S
Sbjct: 299 LVHLQGLKSLAYLNWESTKITDAGYTRLHEFLPKLS 334
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 121/273 (44%), Gaps = 40/273 (14%)
Query: 91 YLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET 150
++ S+ D T + L A+ + LK LD S + +TD+ M + + LE L L T
Sbjct: 90 WISSVGYGDDYEFTEADLAAIAQLKSLKILDFSSSL-ITDSDMSYFQGLYNLEALILERT 148
Query: 151 GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKM 210
S+ D G L L+ L KL+ L LW + V++ G + LK
Sbjct: 149 ----------------SIGDAG--------LYHLRDLRKLKVLRLWETDVTDVGLSYLKD 184
Query: 211 FPRLSFLNLAWT-----GVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L++LNL+ T G+ L + +L+ L L Q L L+ L LE
Sbjct: 185 LTELTYLNLSETKISDAGLIHLKGMLNLQTLYLDATQVSDR------GLIYLKELPKLET 238
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 325
L+L +V+DA L LS + L L+L + ++D L L L +L L IR +++G
Sbjct: 239 LDLLDAEVTDAGLVHLSECRNLKKLTLADTQISDQGLVYLGKLKELHELDIRYTNTSDAG 298
Query: 326 LGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMH 358
L + +SL L+ W T+ + ++H
Sbjct: 299 LVHLQGLKSLAYLN----WESTKITDAGYTRLH 327
>gi|149175887|ref|ZP_01854505.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
gi|148845334|gb|EDL59679.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
Length = 360
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 125/274 (45%), Gaps = 37/274 (13%)
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
+++ G+ HL L++L L T ++ DG+ L L L+ LDL PV+ L LQ L
Sbjct: 124 LSNTGLVHLKRFHRLKRLMLWNTSVSDDGLVHLKELSQLNHLDLFYTPVSGSGLAHLQGL 183
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAE 247
T L +L+L G+ V+N G + F L LNL T ++
Sbjct: 184 TNLTWLNLQGTAVTNAGLKQVNCFSALRVLNLNQTSISD--------------------- 222
Query: 248 TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 307
L L++L L L LEQTQV+ L LS+ +L L L + + D S+ L S
Sbjct: 223 ----AGLVHLRDLPQLIILQLEQTQVTGTGLSELSSLPKLYCLKLNGSLINDSSMSHLKS 278
Query: 308 LSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHEL 367
L L ++D ++++GL L L+L G + DA L + + PR++
Sbjct: 279 FKTLIRLELQDTQISDAGLVHLSGLPLLDALNLSGTQV--TDAGLVYLQGLPRLK----- 331
Query: 368 SVICPSDQIGSNGPSPSRTSLRASLVKQKQDPMP 401
+V + Q+ S G R +++Q +DP+P
Sbjct: 332 NVYLKNTQVTSEGLEQ-----RKLILQQSRDPLP 360
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 80/172 (46%), Gaps = 26/172 (15%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
V +A+L L LN+ VT++ L + + L+ L+L++ ++DAG+ HL
Sbjct: 172 VSGSGLAHLQGLTNLTWLNLQGTA-VTNAGLKQVNCFSALRVLNLNQT-SISDAGLVHLR 229
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLV---LRSLQVLTKLEY-- 192
+ L L L +T +T G++ LSSL L L L G + D L+S + L +LE
Sbjct: 230 DLPQLIILQLEQTQVTGTGLSELSSLPKLYCLKLNGSLINDSSMSHLKSFKTLIRLELQD 289
Query: 193 -------------------LDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 225
L+L G+QV++ G L+ PRL + L T VT
Sbjct: 290 TQISDAGLVHLSGLPLLDALNLSGTQVTDAGLVYLQGLPRLKNVYLKNTQVT 341
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
M++L +F+ L L + D + ++ + L L+G+ L L+LS +VTDAG+ +L + L
Sbjct: 273 MSHLKSFKTLIRLELQDTQ-ISDAGLVHLSGLPLLDALNLS-GTQVTDAGLVYLQGLPRL 330
Query: 143 EKLWLSETGLTADGI 157
+ ++L T +T++G+
Sbjct: 331 KNVYLKNTQVTSEGL 345
>gi|149176763|ref|ZP_01855374.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
gi|148844404|gb|EDL58756.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
Length = 416
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 154/335 (45%), Gaps = 29/335 (8%)
Query: 22 ESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSL---LEVFKHNAEAIELR--GEN 76
E +Q+WR + + E++ H + ++ + +L + S+ F N ++ R G
Sbjct: 41 EGLQRWRAMKLA-EKVIQHDGEIRFKNSLLTQLDWWSVSPQTHAFWGNIYSVYTRPSGSF 99
Query: 77 SVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCV----KVTDAG 132
VD +++ LG +++L + + T + G T LK+ L +TD G
Sbjct: 100 QVDDDFLLELGNLHSIQNLTLGNPHNPT---IITDQGATYLKQQKLGHLGITGGSMTDNG 156
Query: 133 MKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 192
+ L +++L L L +T D + ++ L +LDL T+ L++L L Y
Sbjct: 157 LNELAEMNSLRTLGLHHLAITGDQLPP-NTFPKLKMLDLSDTRFTNQGLKNLSPNASLVY 215
Query: 193 LDLWGSQVSNRGAAVLKMFP-----RLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAE 247
L L + VS+ G L FP RL L + KL N+ L L+L Q A
Sbjct: 216 LHLSNTNVSSAGLQELSKFPNLRALRLGNLKIKAAAFAKLANMKRLYQLDL----QGTAV 271
Query: 248 TDLVLSLTALQ--NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 305
D V ALQ L+ + +L L+Q+Q++D L L+T K L L L A +TD L L
Sbjct: 272 NDAV----ALQLSQLDQITQLRLDQSQITDQGLRHLATMKNLETLFLPGAKITDSGLKVL 327
Query: 306 SSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
S L KL L + D +++ GL +L++L+L
Sbjct: 328 SQLPKLDYLDLSDTQISDEGLRQLSKIPALRMLNL 362
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 93/184 (50%), Gaps = 11/184 (5%)
Query: 66 NAEAIELRGENS-VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSR 124
NA + L N+ V + + L F LR+L + + + + ++A L M L +LDL +
Sbjct: 210 NASLVYLHLSNTNVSSAGLQELSKFPNLRALRLGNLK-IKAAAFAKLANMKRLYQLDL-Q 267
Query: 125 CVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL 184
V DA L + + +L L ++ +T G+ L++++NL L L G +TD L+ L
Sbjct: 268 GTAVNDAVALQLSQLDQITQLRLDQSQITDQGLRHLATMKNLETLFLPGAKITDSGLKVL 327
Query: 185 QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT--------KLPNISSLECL 236
L KL+YLDL +Q+S+ G L P L LNL+ T VT + P + S+E
Sbjct: 328 SQLPKLDYLDLSDTQISDEGLRQLSKIPALRMLNLSNTRVTDQAKQILLQFPALESIEAF 387
Query: 237 NLSF 240
N S
Sbjct: 388 NTSI 391
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 108/219 (49%), Gaps = 21/219 (9%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 176
LK LDLS + T+ G+K+L ++L L LS T +++ G+ LS NL L LG L +
Sbjct: 189 LKMLDLSDT-RFTNQGLKNLSPNASLVYLHLSNTNVSSAGLQELSKFPNLRALRLGNLKI 247
Query: 177 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK--LPNISSLE 234
L + +L LDL G+ V++ A L +++ L L + +T L ++++++
Sbjct: 248 KAAAFAKLANMKRLYQLDLQGTAVNDAVALQLSQLDQITQLRLDQSQITDQGLRHLATMK 307
Query: 235 CLNLSFIQQVGAE-TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 293
L F+ GA+ TD L L L L+ L+L TQ+SD L LS L L+L
Sbjct: 308 NLETLFLP--GAKITDS--GLKVLSQLPKLDYLDLSDTQISDEGLRQLSKIPALRMLNLS 363
Query: 294 NASLTDVSLHQL-------------SSLSKLTNLSIRDA 319
N +TD + L +S+S +T IRDA
Sbjct: 364 NTRVTDQAKQILLQFPALESIEAFNTSISPVTIEDIRDA 402
>gi|149174540|ref|ZP_01853166.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
gi|148846650|gb|EDL60987.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
Length = 309
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 129/266 (48%), Gaps = 36/266 (13%)
Query: 127 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 186
K+ DAG+ +L +S L KL LS + +T DG+ L SL++L + L G+PV+D L +
Sbjct: 49 KLVDAGLVYLGRLSKLRKLDLSGSKVTDDGMVHLKSLKSLREITLHGIPVSDSGLAEFKK 108
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRL-----SFLNLAWTGVTKLPNISSLECLNLSFI 241
L+ LE L+L ++V++ G LK L + L + G+ L + SLE L LS
Sbjct: 109 LSNLEILNLSRTKVTDAGLKHLKSLDSLKELFLTGLEITADGLAHLSGLKSLETLGLSET 168
Query: 242 Q-----------------------QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATL 278
Q Q+ E L ++ L L+RL L TQ++D L
Sbjct: 169 QITDDALAHLKTLKKLRVLLLRDTQITDE-----GLKQIKGLTRLQRLWLRNTQITDDGL 223
Query: 279 FPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 338
L K++ L L + +T+ + ++ L + ++++R+ +++ + S K ++L L
Sbjct: 224 KYLIKMKDMEWLELNDTQITNAGISEIKVLENIVDMNLRNTDVSDKCITSLKKMKNLGTL 283
Query: 339 DLHGGWLLTEDAILQFCKMHP--RIE 362
+ G +TE+ I + K P R+E
Sbjct: 284 YIDGTE-ITEEGIAKLEKSLPYCRVE 308
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 129/293 (44%), Gaps = 52/293 (17%)
Query: 63 FKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKE--- 119
+ N + G VDA + YLG LR L+++ + VT + L + L+E
Sbjct: 36 YNGNISQVSFSGSKLVDA-GLVYLGRLSKLRKLDLSGSK-VTDDGMVHLKSLKSLREITL 93
Query: 120 ---------------------LDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIA 158
L+LSR KVTDAG+KHL S+ +L++L+L+ +TADG+A
Sbjct: 94 HGIPVSDSGLAEFKKLSNLEILNLSRT-KVTDAGLKHLKSLDSLKELFLTGLEITADGLA 152
Query: 159 LLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN 218
LS L++L L L +TD L L+ L KL L L +Q+++ G +K RL L
Sbjct: 153 HLSGLKSLETLGLSETQITDDALAHLKTLKKLRVLLLRDTQITDEGLKQIKGLTRLQRLW 212
Query: 219 LAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATL 278
L T +T L L + +E L L TQ+++A +
Sbjct: 213 LRNTQITD-------------------------DGLKYLIKMKDMEWLELNDTQITNAGI 247
Query: 279 FPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP 331
+ + ++ ++LRN ++D + L + L L I +T G+ +
Sbjct: 248 SEIKVLENIVDMNLRNTDVSDKCITSLKKMKNLGTLYIDGTEITEEGIAKLEK 300
>gi|168699408|ref|ZP_02731685.1| hypothetical protein GobsU_07802 [Gemmata obscuriglobus UQM 2246]
Length = 320
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 121/237 (51%), Gaps = 17/237 (7%)
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
VTDAG+K L + L L L+ +T G+ L+SL +L+ LDL VTD ++ L L
Sbjct: 85 VTDAGLKALAPLKKLTTLQLTAAKVTDAGVKELASLASLTTLDLASTNVTDAGVKELAPL 144
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSFIQ 242
T+L LDL G++V++ G L L L+L T VT +L +++L+ L+L +
Sbjct: 145 TRLTALDLSGTKVTDAGLKELAPLKNLVTLSLGSTAVTGASLKELAPLTNLKTLHLYDTK 204
Query: 243 QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 302
A L L L L L L T+V+DA L L+ K L L+L +T L
Sbjct: 205 MTDA------GLKELAPLTSLTTLTLAATKVTDAGLKGLTPLKNLSDLNLGGTKVTSAGL 258
Query: 303 HQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLT------EDAILQ 353
+L++L LT L + +T++GL P +LK+L L G + T +DA+L+
Sbjct: 259 KELAALKNLTVLDLDVTAVTDAGLKELTPLTNLKVLRLVGAKVTTKGVKEFKDAVLK 315
>gi|46445970|ref|YP_007335.1| hypothetical protein pc0336 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46399611|emb|CAF23060.1| hypothetical protein pc0336 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 602
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 123/236 (52%), Gaps = 17/236 (7%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ ++L N++ +A+L L+ LN++ C+ +T + L LT + L+ LDLS C
Sbjct: 336 QHLDLSECNNLTDAGLAHLTPLMALQHLNLSYCKNLTDAGLAHLTPLVALQYLDLSGCDN 395
Query: 128 VTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQ 185
+TDAG+ HL + L+ L LS LT G+A L+ L L L L G +TD+ L L
Sbjct: 396 LTDAGLAHLTPLMALQHLGLSACDKLTDAGLAHLTPLVALQYLSLNGCDKLTDVGLAHLT 455
Query: 186 VLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNL 238
L L +L+L W ++++ G A L L LNL W G+ L + +L+ L+L
Sbjct: 456 PLVALTHLNLSWCDKLTDAGLAHLTPLVALQHLNLRWCRKLTDAGLAHLTPLVALQHLDL 515
Query: 239 SFIQQVGAETDLVLS-LTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHLSL 292
+ ++ TD L+ LT+L NL H LNL +++D L L+ L HL+L
Sbjct: 516 NRCPKL---TDAGLAHLTSLVNLRH---LNLSYCRKLTDVGLAHLTPLVALQHLNL 565
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 146/273 (53%), Gaps = 18/273 (6%)
Query: 93 RSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-G 151
+ L++++C +T + L LT + L+ L+LS C +TDAG+ HL + L+ L LS
Sbjct: 336 QHLDLSECNNLTDAGLAHLTPLMALQHLNLSYCKNLTDAGLAHLTPLVALQYLDLSGCDN 395
Query: 152 LTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDLWG-SQVSNRGAAVLK 209
LT G+A L+ L L L L +TD L L L L+YL L G ++++ G A L
Sbjct: 396 LTDAGLAHLTPLMALQHLGLSACDKLTDAGLAHLTPLVALQYLSLNGCDKLTDVGLAHLT 455
Query: 210 MFPRLSFLNLAW------TGVTKLPNISSLECLNLSFIQQVGAETDLVLS-LTALQNLNH 262
L+ LNL+W G+ L + +L+ LNL + +++ TD L+ LT L L H
Sbjct: 456 PLVALTHLNLSWCDKLTDAGLAHLTPLVALQHLNLRWCRKL---TDAGLAHLTPLVALQH 512
Query: 263 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDA-V 320
L+ LN +++DA L L++ L HL+L LTDV L L+ L L +L++
Sbjct: 513 LD-LN-RCPKLTDAGLAHLTSLVNLRHLNLSYCRKLTDVGLAHLTPLVALQHLNLSCCRK 570
Query: 321 LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQ 353
LT++GL +L+ LDL G LT DA+L+
Sbjct: 571 LTDAGLAHLASLLALQHLDLSGCDKLT-DAVLE 602
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 67/117 (57%), Gaps = 2/117 (1%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+A+L L+ LN+ CR++T + L LT + L+ LDL+RC K+TDAG+ HL S+ L
Sbjct: 476 LAHLTPLVALQHLNLRWCRKLTDAGLAHLTPLVALQHLDLNRCPKLTDAGLAHLTSLVNL 535
Query: 143 EKLWLSET-GLTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDLWG 197
L LS LT G+A L+ L L L+L +TD L L L L++LDL G
Sbjct: 536 RHLNLSYCRKLTDVGLAHLTPLVALQHLNLSCCRKLTDAGLAHLASLLALQHLDLSG 592
>gi|406830023|ref|ZP_11089617.1| hypothetical protein SpalD1_00247 [Schlesneria paludicola DSM
18645]
Length = 374
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 138/268 (51%), Gaps = 13/268 (4%)
Query: 102 RVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLS 161
++T L L + L LDL C +TD G+ + +++L L LS T T G+ L+
Sbjct: 110 KITDVGLVELKDLKNLTRLDLGGCTAITDVGLNEIKELTSLASLHLSYTQFTDVGLKELA 169
Query: 162 SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW 221
L+ LS L+L G +TD L+ L LT L L L +++S+ G LK L L+L
Sbjct: 170 DLKCLSNLELRGTQITDDGLKELGTLTSLTRLTLMQTKISDLGLRELKGLRNLQILDLGL 229
Query: 222 T-----GVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDA 276
T G+ ++ ++ + L L F ++ E + ++ LN+L L+L QT++++
Sbjct: 230 TEITDEGLKEIIDLKQIHSLYL-FGDEITDE-----GMQSIGELNNLTELDLIQTEITNE 283
Query: 277 TLFPLS-TFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSL 335
L +S L + +TDV L ++ ++++LTN+++ +TN+GL + ++L
Sbjct: 284 GLKEISGLKNLKKLHLLNDGKITDVGLKEIGTMTQLTNINLGRTGITNAGLKELRNLKNL 343
Query: 336 KLLDLHGGWLLTEDAILQFCKMHPRIEV 363
+ LD+ +T + ++ K P++++
Sbjct: 344 QSLDVSETE-VTSEGVVALQKELPKLDI 370
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 116/235 (49%), Gaps = 7/235 (2%)
Query: 95 LNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTA 154
+N+ R + AL T + L+L+ K+TD+G+K + + ++L L L+ T +T
Sbjct: 55 VNLQQSERFGDGYVHALKPFTKMTSLNLN-STKITDSGLKGIRNFTSLTMLTLAFTKITD 113
Query: 155 DGIALLSSLQNLSVLDLGG-LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPR 213
G+ L L+NL+ LDLGG +TD+ L ++ LT L L L +Q ++ G L
Sbjct: 114 VGLVELKDLKNLTRLDLGGCTAITDVGLNEIKELTSLASLHLSYTQFTDVGLKELADLKC 173
Query: 214 LSFLNLAWTGVTK--LPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 271
LS L L T +T L + +L L + Q L L L+ L +L+ L+L T
Sbjct: 174 LSNLELRGTQITDDGLKELGTLTSLTRLTLMQTKISD---LGLRELKGLRNLQILDLGLT 230
Query: 272 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 326
+++D L + K++ L L +TD + + L+ LT L + +TN GL
Sbjct: 231 EITDEGLKEIIDLKQIHSLYLFGDEITDEGMQSIGELNNLTELDLIQTEITNEGL 285
>gi|46447141|ref|YP_008506.1| hypothetical protein pc1507 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400782|emb|CAF24231.1| hypothetical protein pc1507 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 623
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 161/356 (45%), Gaps = 49/356 (13%)
Query: 56 FPSLLEVFKHNAEAIELRGENS--VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTG 113
F +L F + EA+ EN+ DA +A L + L+ L + C +T + L L+
Sbjct: 256 FEKILNYFSNEVEALNF-SENAHLTDAHLLA-LKTCKNLKVLYLKKCCNLTDAGLSHLSP 313
Query: 114 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET----------------------- 150
+ L+ L+LS C ++TDAG+ HL S+ L+ L LSE
Sbjct: 314 LVALQHLELSDCPRLTDAGLAHLTSLVALQYLNLSECSNFTDAGLAHLTPLLTLTHLNLS 373
Query: 151 ---GLTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGA 205
T G+A L+ L L L+LG +TD L L L L++L+L W S +++ G
Sbjct: 374 WCYNFTHAGLAHLTPLVALQHLNLGHCRNITDAGLAHLSPLVALQHLNLGWCSNLTDAGL 433
Query: 206 AVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSFIQQVGAETDLVLS-LTALQ 258
A L L L+L W G+ L ++ +L+ L+LS+ + TD L+ L+ L
Sbjct: 434 AHLSPLVALQHLDLGWCSNLTDAGLAHLTSLVALQHLDLSWCYYL---TDAGLAHLSPLV 490
Query: 259 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIR 317
L HL+ N + DA L L+ L +L+L +LTD L L+ L L +L +
Sbjct: 491 ALQHLDLSNC--LSLKDAGLAHLTLLVTLKYLNLNKCHNLTDAGLAHLTPLVALQHLDLS 548
Query: 318 DAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICP 372
LT +GL +L+ LD+ LT+ + + P + + H CP
Sbjct: 549 QCPNLTGTGLAHLNSLMALQHLDMSWCHNLTDAGLTH---LTPLVNLRHLNLTKCP 601
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 63/115 (54%), Gaps = 2/115 (1%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+A+L L+ LN+ C +T + L LT + L+ LDLS+C +T G+ HL S+ L
Sbjct: 508 LAHLTLLVTLKYLNLNKCHNLTDAGLAHLTPLVALQHLDLSQCPNLTGTGLAHLNSLMAL 567
Query: 143 EKLWLSET-GLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDL 195
+ L +S LT G+ L+ L NL L+L P +TD L L L LE+LDL
Sbjct: 568 QHLDMSWCHNLTDAGLTHLTPLVNLRHLNLTKCPKLTDAGLAHLAPLVALEHLDL 622
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+A+L + L+ L+++ C +T + L LT + L+ L+L++C K+TDAG+ HL + L
Sbjct: 558 LAHLNSLMALQHLDMSWCHNLTDAGLTHLTPLVNLRHLNLTKCPKLTDAGLAHLAPLVAL 617
Query: 143 EKLWLS 148
E L LS
Sbjct: 618 EHLDLS 623
>gi|149173873|ref|ZP_01852502.1| hypothetical protein PM8797T_05530 [Planctomyces maris DSM 8797]
gi|148847403|gb|EDL61737.1| hypothetical protein PM8797T_05530 [Planctomyces maris DSM 8797]
Length = 473
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 126/281 (44%), Gaps = 18/281 (6%)
Query: 69 AIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELD-LSRCVK 127
A ++ NS +G L + NV+ C+ VT L L G+ LK+L L+ C+K
Sbjct: 105 AFDMFDGNSFSPAGWKQIGQISGLEAFNVS-CQYVTDEHLMGLQGLPQLKDLKILNNCMK 163
Query: 128 ---VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL 184
V+D G++ L S L +L L + G L+ L L+L G P+TD L+ L
Sbjct: 164 QSPVSDQGLQVLSSFPALRRLVLHSREINVRGCELIGDCTELRALELWG-PITDECLKPL 222
Query: 185 QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-----NLAWTGVTKLPNISSLECLNLS 239
L L++L + G+ S+ G L +L+ L + +G+ L S
Sbjct: 223 GKLKNLKHLIVVGT-FSDAGLKHLSGLKQLTRLVLHSDQMTGSGLNSFAEAPELREFGFS 281
Query: 240 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 299
A +L L L L LNL V+DA L + +L LSL+N+++TD
Sbjct: 282 GSPAGNA------TLKQLDQLPGLAVLNLSTPSVNDAVLQTMPDLPQLEALSLKNSNITD 335
Query: 300 VSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
L L + L L + +TN+GL +P + L+LL L
Sbjct: 336 KGLDALVKVKNLRELVLYSTEITNAGLIRLEPLQQLRLLVL 376
>gi|46446627|ref|YP_007992.1| hypothetical protein pc0993 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400268|emb|CAF23717.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 478
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 122/245 (49%), Gaps = 13/245 (5%)
Query: 30 QRRSLERLPAHLADSL-LRHLIRRRLIFPSLLEVFKH--NAEAIELRGENSVDAEWMAYL 86
Q ER HL++ + + H + + + K N + + ++ + +A+L
Sbjct: 212 QLAEFERTIKHLSNEIDILHFSNQTYLTDAHFSALKECKNLKILTFETCQALTDDGLAHL 271
Query: 87 GAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLW 146
+ L+ L + C +VT + L LT + L+ LDLS C +TDAG+ HL ++ L++L
Sbjct: 272 ASLTALQHLGLRGCDKVTDAGLAHLTSLRALQYLDLSFCRNITDAGLAHLTPLTALQRLL 331
Query: 147 LSET-GLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGS-QVSNR 203
L + LT G+A L+ L+ L LDL +TD L L+ L L++LDL ++++
Sbjct: 332 LKKCENLTGAGLAHLTPLKALQYLDLSYWDNLTDDGLAHLRPLVALQHLDLANCYELTDA 391
Query: 204 GAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSFIQQV-GAETDLVLSLTA 256
G A L L+ L L W G+ L + +L+ LNLS + + A ++ LTA
Sbjct: 392 GLAHLTPLVALTHLKLIWCHKLTDAGLAHLRPLVALKHLNLSSCRNLTDAGLAHLIPLTA 451
Query: 257 LQNLN 261
LQ LN
Sbjct: 452 LQYLN 456
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 94/177 (53%), Gaps = 9/177 (5%)
Query: 72 LRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDA 131
LRG + V +A+L + R L+ L+++ CR +T + L LT +T L+ L L +C +T A
Sbjct: 282 LRGCDKVTDAGLAHLTSLRALQYLDLSFCRNITDAGLAHLTPLTALQRLLLKKCENLTGA 341
Query: 132 GMKHLLSISTLEKLWLSE-TGLTADGIALLSSLQNLSVLDLGG-LPVTDLVLRSLQVLTK 189
G+ HL + L+ L LS LT DG+A L L L LDL +TD L L L
Sbjct: 342 GLAHLTPLKALQYLDLSYWDNLTDDGLAHLRPLVALQHLDLANCYELTDAGLAHLTPLVA 401
Query: 190 LEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLS 239
L +L L W ++++ G A L+ L LNL+ G+ L +++L+ LNLS
Sbjct: 402 LTHLKLIWCHKLTDAGLAHLRPLVALKHLNLSSCRNLTDAGLAHLIPLTALQYLNLS 458
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 117/264 (44%), Gaps = 26/264 (9%)
Query: 95 LNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTA 154
L+ ++ +T + AL LK L C +TD G+ HL S++ L+ L L
Sbjct: 230 LHFSNQTYLTDAHFSALKECKNLKILTFETCQALTDDGLAHLASLTALQHLGLRGCDKVT 289
Query: 155 D-GIALLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFP 212
D G+A L+SL+ L LDL +TD L L LT L+ L L +
Sbjct: 290 DAGLAHLTSLRALQYLDLSFCRNITDAGLAHLTPLTALQRLLLKKCE------------- 336
Query: 213 RLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ 272
NL G+ L + +L+ L+LS+ + D + L L L HL+ N +
Sbjct: 337 -----NLTGAGLAHLTPLKALQYLDLSYWDNL--TDDGLAHLRPLVALQHLDLANC--YE 387
Query: 273 VSDATLFPLSTFKELIHLSLR-NASLTDVSLHQLSSLSKLTNLSIRDA-VLTNSGLGSFK 330
++DA L L+ L HL L LTD L L L L +L++ LT++GL
Sbjct: 388 LTDAGLAHLTPLVALTHLKLIWCHKLTDAGLAHLRPLVALKHLNLSSCRNLTDAGLAHLI 447
Query: 331 PPRSLKLLDLHGGWLLTEDAILQF 354
P +L+ L+L LT+ + F
Sbjct: 448 PLTALQYLNLSDCRKLTDTGLASF 471
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+A+L L L + C ++T + L L + LK L+LS C +TDAG+ HL+ ++ L
Sbjct: 393 LAHLTPLVALTHLKLIWCHKLTDAGLAHLRPLVALKHLNLSSCRNLTDAGLAHLIPLTAL 452
Query: 143 EKLWLSET-GLTADGIA 158
+ L LS+ LT G+A
Sbjct: 453 QYLNLSDCRKLTDTGLA 469
>gi|188586163|ref|YP_001917708.1| hypothetical protein Nther_1542 [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179350850|gb|ACB85120.1| Leucine-rich repeat, ribonuclease inhibitor subtype [Natranaerobius
thermophilus JW/NM-WN-LF]
Length = 344
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 113/251 (45%), Gaps = 15/251 (5%)
Query: 81 EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
E + L L LN+ + +T + L LK++ L+ VTD G K L
Sbjct: 92 EDVNTLAEVDNLEELNL-NYTEITDEGIEQLAEADNLKQISLTHT-DVTDEGTKLLAESE 149
Query: 141 TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 200
+LE+L LS T +T DG+ L NL LDL G VTD L LE L L ++V
Sbjct: 150 SLERLILSGTEVTDDGLEHLIEADNLKKLDLHGTDVTDDGAEHLAETDNLEKLSLVDTEV 209
Query: 201 SNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSFIQQVGAETDLVLSLT 255
++ G L L L L WT GV L +LE L+L + +
Sbjct: 210 TDEGIEQLVKVDNLEVLILGWTEVTDNGVEYLAEADNLEMLHLDGTEITNE------GVK 263
Query: 256 ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLS 315
L ++LE L+L+QT+V+D L+ L L L + +TD + +L+ L ++
Sbjct: 264 YLAEADNLEELDLKQTKVTDVN--ALAETDSLEELDLWDTDVTDEGVKELAEADSLKVVN 321
Query: 316 IRDAVLTNSGL 326
+ + +TN G+
Sbjct: 322 LDETEVTNEGV 332
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 94/224 (41%), Gaps = 50/224 (22%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 176
L+EL+L+ ++TD G++ L L+++ L+ T +T +G LL+ ++L L L G V
Sbjct: 103 LEELNLNYT-EITDEGIEQLAEADNLKQISLTHTDVTDEGTKLLAESESLERLILSGTEV 161
Query: 177 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
TD L L L+ LDL G+ V++ GA L
Sbjct: 162 TDDGLEHLIEADNLKKLDLHGTDVTDDGAEHL---------------------------- 193
Query: 237 NLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 296
AETD +LE+L+L T+V+D + L L L L
Sbjct: 194 ---------AETD------------NLEKLSLVDTEVTDEGIEQLVKVDNLEVLILGWTE 232
Query: 297 LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
+TD + L+ L L + +TN G+ +L+ LDL
Sbjct: 233 VTDNGVEYLAEADNLEMLHLDGTEITNEGVKYLAEADNLEELDL 276
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 18/210 (8%)
Query: 161 SSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA 220
++++L+ L + G D+ ++ ++ L+ L L G+++ + L L LNL
Sbjct: 55 ENIEDLTTLTVSG---EDINIKGIEYAINLQELSLQGTKIED--VNTLAEVDNLEELNLN 109
Query: 221 WT-----GVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
+T G+ +L +L+ ++L+ T L L LERL L T+V+D
Sbjct: 110 YTEITDEGIEQLAEADNLKQISLTHTDVTDEGTKL------LAESESLERLILSGTEVTD 163
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSL 335
L L L L L +TD L+ L LS+ D +T+ G+ +L
Sbjct: 164 DGLEHLIEADNLKKLDLHGTDVTDDGAEHLAETDNLEKLSLVDTEVTDEGIEQLVKVDNL 223
Query: 336 KLLDLHGGWLLTEDAILQFCKMHPRIEVWH 365
++L L GW D +++ +E+ H
Sbjct: 224 EVLIL--GWTEVTDNGVEYLAEADNLEMLH 251
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 95/216 (43%), Gaps = 16/216 (7%)
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
+I L L +S + GI +LQ LS L G + D+ +L + LE L+L
Sbjct: 56 NIEDLTTLTVSGEDINIKGIEYAINLQELS---LQGTKIEDV--NTLAEVDNLEELNLNY 110
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSFIQQVGAETDLVL 252
+++++ G L L ++L T VT L SLE L LS +
Sbjct: 111 TEITDEGIEQLAEADNLKQISLTHTDVTDEGTKLLAESESLERLILSGTEVTDD------ 164
Query: 253 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 312
L L ++L++L+L T V+D L+ L LSL + +TD + QL + L
Sbjct: 165 GLEHLIEADNLKKLDLHGTDVTDDGAEHLAETDNLEKLSLVDTEVTDEGIEQLVKVDNLE 224
Query: 313 NLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 348
L + +T++G+ +L++L L G + E
Sbjct: 225 VLILGWTEVTDNGVEYLAEADNLEMLHLDGTEITNE 260
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 83/209 (39%), Gaps = 40/209 (19%)
Query: 26 KWRRQRRSLERL---PAHLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEW 82
K + SLERL + D L HLI N + ++L G + D +
Sbjct: 143 KLLAESESLERLILSGTEVTDDGLEHLIEAD------------NLKKLDLHGTDVTD-DG 189
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+L L L++ D VT + L + L+ L L +VTD G+++L L
Sbjct: 190 AEHLAETDNLEKLSLVDTE-VTDEGIEQLVKVDNLEVLILG-WTEVTDNGVEYLAEADNL 247
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLG----------------------GLPVTDLV 180
E L L T +T +G+ L+ NL LDL VTD
Sbjct: 248 EMLHLDGTEITNEGVKYLAEADNLEELDLKQTKVTDVNALAETDSLEELDLWDTDVTDEG 307
Query: 181 LRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ L L+ ++L ++V+N G L+
Sbjct: 308 VKELAEADSLKVVNLDETEVTNEGVEHLE 336
>gi|219122964|ref|XP_002181805.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407081|gb|EEC47019.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 486
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 140/288 (48%), Gaps = 16/288 (5%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
E +L +SV + L + L +L++ +CRR+T A+ ++ + L+ L L C
Sbjct: 106 EVAKLDNCHSVVGRGLVVLSSSPRLHTLSLTNCRRLTDEAIVNISHLQSLQALSLDGCRC 165
Query: 128 VTDAGMKHLLSISTLEKLWLSETGL-TADGIALLSSLQNLSVLDLG-GLPVTDLVLRSLQ 185
+TD + L + L KL LS+ L T +G+ L LQ L + LG V+D +++L
Sbjct: 166 ITDFSLAALADMYNLRKLGLSQCDLITNEGLKALEHLQRLQEISLGWCRQVSDAGIQTLT 225
Query: 186 VL----TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV-----TKLPNISSLECL 236
+ L+ L L +++ G L + L L ++ V TKL N+ LE L
Sbjct: 226 AQPGRSSNLQILRLARCPITDEGVQYLGKIRNVKTLELCYSAVKDIHLTKLVNLPMLEEL 285
Query: 237 NLSFIQQVGAETDLVLSLTALQN-LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 295
NL +G DL + A N L +L L+L + +SD + ++ F +L LSL
Sbjct: 286 NLDSC-PIG---DLAIQHFANHNVLPNLVSLDLADSDISDLGMVQIAKFTKLKRLSLFYC 341
Query: 296 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGG 343
S+++ L LS L++L L++ +++ GL + + LK LD+ G
Sbjct: 342 SISNRGLRHLSILTELRVLNLDSRDISDDGLRHLQHLKQLKSLDIFSG 389
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 141/304 (46%), Gaps = 23/304 (7%)
Query: 52 RRLIFPSLLEVFK-HNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWA 110
RRL +++ + + +A+ L G + +A L LR L ++ C +T+ L A
Sbjct: 139 RRLTDEAIVNISHLQSLQALSLDGCRCITDFSLAALADMYNLRKLGLSQCDLITNEGLKA 198
Query: 111 LTGMTCLKELDLSRCVKVTDAGMKHLLS----ISTLEKLWLSETGLTADGIALLSSLQNL 166
L + L+E+ L C +V+DAG++ L + S L+ L L+ +T +G+ L ++N+
Sbjct: 199 LEHLQRLQEISLGWCRQVSDAGIQTLTAQPGRSSNLQILRLARCPITDEGVQYLGKIRNV 258
Query: 167 SVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN---RGAAVLKMFPRLSFLNLAWT- 222
L+L V D+ L L L LE L+L + + + A + P L L+LA +
Sbjct: 259 KTLELCYSAVKDIHLTKLVNLPMLEELNLDSCPIGDLAIQHFANHNVLPNLVSLDLADSD 318
Query: 223 ----GVTKLPNISSLECLNLSF--IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDA 276
G+ ++ + L+ L+L + I G L L L L LNL+ +SD
Sbjct: 319 ISDLGMVQIAKFTKLKRLSLFYCSISNRG--------LRHLSILTELRVLNLDSRDISDD 370
Query: 277 TLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLK 336
L L K+L L + + +TD+ LS + L +L + + ++G S +L
Sbjct: 371 GLRHLQHLKQLKSLDIFSGRVTDLGCTYLSKIKTLESLELCGGGVRDAGCASLAKLENLT 430
Query: 337 LLDL 340
L+L
Sbjct: 431 SLNL 434
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 128/276 (46%), Gaps = 24/276 (8%)
Query: 65 HNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGM----TCLKEL 120
+N + L + + E + L + L+ +++ CR+V+ + + LT + L+ L
Sbjct: 178 YNLRKLGLSQCDLITNEGLKALEHLQRLQEISLGWCRQVSDAGIQTLTAQPGRSSNLQIL 237
Query: 121 DLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLV 180
L+RC +TD G+++L I ++ L L + + + L +L L L+L P+ DL
Sbjct: 238 RLARC-PITDEGVQYLGKIRNVKTLELCYSAVKDIHLTKLVNLPMLEELNLDSCPIGDLA 296
Query: 181 LRSL---QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISS 232
++ VL L LDL S +S+ G + F +L L+L + G+ L ++
Sbjct: 297 IQHFANHNVLPNLVSLDLADSDISDLGMVQIAKFTKLKRLSLFYCSISNRGLRHLSILTE 356
Query: 233 LECLNLSF--IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 290
L LNL I G L LQ+L L+ L++ +V+D LS K L L
Sbjct: 357 LRVLNLDSRDISDDG--------LRHLQHLKQLKSLDIFSGRVTDLGCTYLSKIKTLESL 408
Query: 291 SLRNASLTDVSLHQLSSLSKLTNLSI-RDAVLTNSG 325
L + D L+ L LT+L++ ++ +TN G
Sbjct: 409 ELCGGGVRDAGCASLAKLENLTSLNLSQNERITNRG 444
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 150/380 (39%), Gaps = 94/380 (24%)
Query: 37 LPAHLADSLLRHLIRRRLIFPSLLEVFKHNAE--AIELRGENSVDAEWMAYLGAFR---- 90
LP + D +L+ LIR + + L + + N E + L G V EW+ L A
Sbjct: 1 LPQDVVDDILQSLIRHSALNATTLRILR-NCELGVLSLSGCRGVTDEWLEALSAESSDSP 59
Query: 91 -YLRSLNVADCRRVTSSALW----ALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+LR+ + +W A + +T LDL ++TD G+ L + LE
Sbjct: 60 PHLRT-----------ALMWHPCAASSALTNTTLLDLRGSQRLTDRGLMQLHDLGRLEVA 108
Query: 146 WLSETG--------------------------LTADGIALLSSLQNLSVLDLG------- 172
L LT + I +S LQ+L L L
Sbjct: 109 KLDNCHSVVGRGLVVLSSSPRLHTLSLTNCRRLTDEAIVNISHLQSLQALSLDGCRCITD 168
Query: 173 ---------------GLPVTDLV----LRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFP 212
GL DL+ L++L+ L +L+ + L W QVS+ G L P
Sbjct: 169 FSLAALADMYNLRKLGLSQCDLITNEGLKALEHLQRLQEISLGWCRQVSDAGIQTLTAQP 228
Query: 213 ---------RLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHL 263
RL+ + GV L I +++ L L + A D + LT L NL L
Sbjct: 229 GRSSNLQILRLARCPITDEGVQYLGKIRNVKTLELCY----SAVKD--IHLTKLVNLPML 282
Query: 264 ERLNLEQTQVSDATLFPLSTFK---ELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV 320
E LNL+ + D + + L+ L L ++ ++D+ + Q++ +KL LS+
Sbjct: 283 EELNLDSCPIGDLAIQHFANHNVLPNLVSLDLADSDISDLGMVQIAKFTKLKRLSLFYCS 342
Query: 321 LTNSGLGSFKPPRSLKLLDL 340
++N GL L++L+L
Sbjct: 343 ISNRGLRHLSILTELRVLNL 362
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 104/246 (42%), Gaps = 37/246 (15%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC------------ 125
+ E + YLG R +++L + V L L + L+EL+L C
Sbjct: 244 ITDEGVQYLGKIRNVKTLELCY-SAVKDIHLTKLVNLPMLEELNLDSCPIGDLAIQHFAN 302
Query: 126 --------------VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDL 171
++D GM + + L++L L ++ G+ LS L L VL+L
Sbjct: 303 HNVLPNLVSLDLADSDISDLGMVQIAKFTKLKRLSLFYCSISNRGLRHLSILTELRVLNL 362
Query: 172 GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV-----TK 226
++D LR LQ L +L+ LD++ +V++ G L L L L GV
Sbjct: 363 DSRDISDDGLRHLQHLKQLKSLDIFSGRVTDLGCTYLSKIKTLESLELCGGGVRDAGCAS 422
Query: 227 LPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 286
L + +L LNLS +++ AL L+ L+ LNL T+V+ + L S
Sbjct: 423 LAKLENLTSLNLSQNERITNR-----GAAALAALSKLKALNLSHTRVNASALRYFSGLMN 477
Query: 287 LIHLSL 292
L L+L
Sbjct: 478 LQSLAL 483
>gi|46447142|ref|YP_008507.1| hypothetical protein pc1508 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400783|emb|CAF24232.1| hypothetical protein pc1508 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 657
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 91/280 (32%), Positives = 135/280 (48%), Gaps = 28/280 (10%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N +A+ L G ++ +A+L L+ L++ DC +T + L L+ + L+ L+LS
Sbjct: 335 NLKALYLEGCKNLTDTGLAHLSPLVALQHLSLFDCENLTDAGLAYLSPLENLQHLNLSHS 394
Query: 126 VKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGL-PVTDLVLRS 183
T+AG+ HL ++ L+ L L LT DG+ LSSL L L L +TD L
Sbjct: 395 KHFTNAGLAHLSPLAALQHLNLFGCENLTGDGLTHLSSLVALQHLGLNFCRNLTDAGLAH 454
Query: 184 LQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQ 242
L L L++LDL + +++ G A L L LNL W C NL+
Sbjct: 455 LAPLVTLQHLDLNFCDNLTDTGLAHLTSLVTLQHLNLGW-------------CRNLT--- 498
Query: 243 QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVS 301
+ LV L+ L+NL HL+ LN + ++DA L L+ L HL+LR LTD
Sbjct: 499 ----DAGLV-HLSPLENLQHLD-LN-DCYNLTDAGLAHLTPLVALQHLNLRRCRKLTDAG 551
Query: 302 LHQLSSLSKLTNLSIRDA-VLTNSGLGSFKPPRSLKLLDL 340
L L+ L L L + LT++GL P +L+ L L
Sbjct: 552 LAHLTPLVALQYLDLFGCRNLTDAGLTHLTPLIALQHLYL 591
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 153/323 (47%), Gaps = 35/323 (10%)
Query: 56 FPSLLEVFKHNAEAIEL-RGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGM 114
F ++ F ++ E + R DA + L + L++L + C+ +T + L L+ +
Sbjct: 300 FEKIINYFANDIEELNFSRNAYLTDAHLLV-LKNCKNLKALYLEGCKNLTDTGLAHLSPL 358
Query: 115 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLGG 173
L+ L L C +TDAG+ +L + L+ L LS + T G+A LS L L L+L G
Sbjct: 359 VALQHLSLFDCENLTDAGLAYLSPLENLQHLNLSHSKHFTNAGLAHLSPLAALQHLNLFG 418
Query: 174 LP-VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISS 232
+T L L L L++L L F R NL G+ L + +
Sbjct: 419 CENLTGDGLTHLSSLVALQHLGL--------------NFCR----NLTDAGLAHLAPLVT 460
Query: 233 LECLNLSFIQQVGAETDLVLS-LTALQNLNHLERLNLEQTQ-VSDATLFPLSTFKELIHL 290
L+ L+L+F + TD L+ LT+L L H LNL + ++DA L LS + L HL
Sbjct: 461 LQHLDLNFCDNL---TDTGLAHLTSLVTLQH---LNLGWCRNLTDAGLVHLSPLENLQHL 514
Query: 291 SLRNA-SLTDVSLHQLSSLSKLTNLSIRDA-VLTNSGLGSFKPPRSLKLLDLHGGWLLTE 348
L + +LTD L L+ L L +L++R LT++GL P +L+ LDL G LT+
Sbjct: 515 DLNDCYNLTDAGLAHLTPLVALQHLNLRRCRKLTDAGLAHLTPLVALQYLDLFGCRNLTD 574
Query: 349 DAILQFCKMHPRIEVWHELSVIC 371
+ + P I + H +C
Sbjct: 575 AGLTH---LTPLIALQHLYLGLC 594
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 95/314 (30%), Positives = 137/314 (43%), Gaps = 57/314 (18%)
Query: 40 HLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVAD 99
HL S +H L S L +H + L G ++ + + +L + L+ L +
Sbjct: 388 HLNLSHSKHFTNAGLAHLSPLAALQH----LNLFGCENLTGDGLTHLSSLVALQHLGLNF 443
Query: 100 CRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIA 158
CR +T + L L + L+ LDL+ C +TD G+ HL S+ TL+ L L LT G+
Sbjct: 444 CRNLTDAGLAHLAPLVTLQHLDLNFCDNLTDTGLAHLTSLVTLQHLNLGWCRNLTDAGLV 503
Query: 159 LLSSLQNLSVLDLGG-LPVTDLVLRSLQVLTKLEYLDLWGS-QVSNRGAAVLKMFPRLSF 216
LS L+NL LDL +TD L L L L++L+L ++++ G A L L +
Sbjct: 504 HLSPLENLQHLDLNDCYNLTDAGLAHLTPLVALQHLNLRRCRKLTDAGLAHLTPLVALQY 563
Query: 217 LNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLS-LTALQNLNHLERLNLEQTQVSD 275
L+L C NL TD L+ LT L L HL
Sbjct: 564 LDL-------------FGCRNL---------TDAGLTHLTPLIALQHL------------ 589
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD-AVLTNSGLGSFKPPRS 334
+L L N +LTD L L+ L+ L L + + LTN+GL P +
Sbjct: 590 -------------YLGLCN-NLTDRGLAHLTPLAVLQRLDLSFCSNLTNAGLRHLSPLVA 635
Query: 335 LKLLDLHGGWLLTE 348
LK LDL G LT+
Sbjct: 636 LKYLDLSGCENLTD 649
>gi|149175912|ref|ZP_01854530.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
gi|148845359|gb|EDL59704.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
Length = 495
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 150/322 (46%), Gaps = 32/322 (9%)
Query: 61 EVFKHNAEAIELR----GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC 116
E KH + + +L G+ +V + Y+ F+ L L + + + +T + + G+
Sbjct: 138 ESLKHFSNSSDLNTLNVGKTAVSDRGLQYVSQFKKLERLYLHETQ-ITDEGMQQIQGLKN 196
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 176
LK L L+ ++TD+G+ L ++ LE+L+L+ET +T G+ L L LS L L +
Sbjct: 197 LKSLMLNE-TEITDSGLTALRNLDQLEELFLNETKITGAGLKKLERLTRLSKLILSETDI 255
Query: 177 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK------LPNI 230
TD ++ L+ L L+ L L +Q+++ G + + FP L L+++ +T L N
Sbjct: 256 TDADIKYLKELPALKRLYLDQTQLTDDGLSQIVDFPSLEMLDVSNNQITDAGLIYLLQNG 315
Query: 231 SSLECLNLSFIQQVGA----------ETDLVLS--------LTALQNLNHLERLNLEQTQ 272
+NLS Q A E L LS L L ++N L L+L Q
Sbjct: 316 KQWSSINLSGNQITDAGLSILGKSHIELTLDLSNTEVTDAGLKYLTSMNMLFGLSLNNCQ 375
Query: 273 VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPP 332
+SD + L L + L +TD SL + + S + L + D LT++G +
Sbjct: 376 ISDQGVQTLMELPALKSIQLNGTDITDCSLEIIKTKSDMLVLYLDDTKLTDAGFSQLQGL 435
Query: 333 RSLKLLDLHGGWLLTEDAILQF 354
L++L L+ + DA L+F
Sbjct: 436 TGLQILSLNNTAV--TDASLKF 455
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 127/270 (47%), Gaps = 35/270 (12%)
Query: 102 RVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLS 161
++T +L + + L L++ + V+D G++++ LE+L+L ET +T +G+ +
Sbjct: 134 KITDESLKHFSNSSDLNTLNVGKTA-VSDRGLQYVSQFKKLERLYLHETQITDEGMQQIQ 192
Query: 162 SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW 221
L+NL L L +TD L +L+ L +LE L L ++++ G L+ RLS L L+
Sbjct: 193 GLKNLKSLMLNETEITDSGLTALRNLDQLEELFLNETKITGAGLKKLERLTRLSKLILSE 252
Query: 222 T-----------------------------GVTKLPNISSLECLNLSFIQQVGAETDLVL 252
T G++++ + SLE L++S Q A
Sbjct: 253 TDITDADIKYLKELPALKRLYLDQTQLTDDGLSQIVDFPSLEMLDVSNNQITDAGL---- 308
Query: 253 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 312
+ LQN +NL Q++DA L L + L L N +TD L L+S++ L
Sbjct: 309 -IYLLQNGKQWSSINLSGNQITDAGLSILGKSHIELTLDLSNTEVTDAGLKYLTSMNMLF 367
Query: 313 NLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 342
LS+ + +++ G+ + +LK + L+G
Sbjct: 368 GLSLNNCQISDQGVQTLMELPALKSIQLNG 397
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 12/205 (5%)
Query: 127 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 186
+++DAG++ L + +E L L T +T + + S+ +L+ L++G V+D L+ +
Sbjct: 111 QISDAGIQQLPQVKLVE-LTLGGTKITDESLKHFSNSSDLNTLNVGKTAVSDRGLQYVSQ 169
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSFI 241
KLE L L +Q+++ G ++ L L L T G+T L N+ LE L L+
Sbjct: 170 FKKLERLYLHETQITDEGMQQIQGLKNLKSLMLNETEITDSGLTALRNLDQLEELFLNET 229
Query: 242 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 301
+ GA L L+ L L +L L +T ++DA + L L L L LTD
Sbjct: 230 KITGA------GLKKLERLTRLSKLILSETDITDADIKYLKELPALKRLYLDQTQLTDDG 283
Query: 302 LHQLSSLSKLTNLSIRDAVLTNSGL 326
L Q+ L L + + +T++GL
Sbjct: 284 LSQIVDFPSLEMLDVSNNQITDAGL 308
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 124/250 (49%), Gaps = 27/250 (10%)
Query: 102 RVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLS 161
++T + L L +T L +L LS +TDA +K+L + L++L+L +T LT DG++ +
Sbjct: 230 KITGAGLKKLERLTRLSKLILSE-TDITDADIKYLKELPALKRLYLDQTQLTDDGLSQIV 288
Query: 162 SLQNLSVLDLGGLPVTDL-VLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA 220
+L +LD+ +TD ++ LQ + ++L G+Q+++ G ++L L+L+
Sbjct: 289 DFPSLEMLDVSNNQITDAGLIYLLQNGKQWSSINLSGNQITDAGLSILGKSHIELTLDLS 348
Query: 221 WTGVTKLPNISSLECLNLSF--------IQQVGAETDLVL----------------SLTA 256
T VT + L +N+ F I G +T + L SL
Sbjct: 349 NTEVTD-AGLKYLTSMNMLFGLSLNNCQISDQGVQTLMELPALKSIQLNGTDITDCSLEI 407
Query: 257 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 316
++ + + L L+ T+++DA L L LSL N ++TD SL + ++KL L++
Sbjct: 408 IKTKSDMLVLYLDDTKLTDAGFSQLQGLTGLQILSLNNTAVTDASLKFFNKMTKLFELNL 467
Query: 317 RDAVLTNSGL 326
+ ++++ +
Sbjct: 468 KQTAVSDAAV 477
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 114/259 (44%), Gaps = 42/259 (16%)
Query: 26 KWRRQRRSLERL---PAHLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEW 82
K+ ++ +L+RL L D L ++ FPSL E +++ DA
Sbjct: 261 KYLKELPALKRLYLDQTQLTDDGLSQIVD----FPSL--------EMLDVSNNQITDAGL 308
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+ L + S+N++ ++T + L L LDLS +VTDAG+K+L S++ L
Sbjct: 309 IYLLQNGKQWSSINLSG-NQITDAGLSILGKSHIELTLDLSN-TEVTDAGLKYLTSMNML 366
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
L L+ ++ G+ L L L + L G +TD L ++ + + L L +++++
Sbjct: 367 FGLSLNNCQISDQGVQTLMELPALKSIQLNGTDITDCSLEIIKTKSDMLVLYLDDTKLTD 426
Query: 203 RGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNH 262
G + L+ L L+L T VT +SL+ N +
Sbjct: 427 AGFSQLQGLTGLQILSLNNTAVTD----ASLKFFN---------------------KMTK 461
Query: 263 LERLNLEQTQVSDATLFPL 281
L LNL+QT VSDA + L
Sbjct: 462 LFELNLKQTAVSDAAVQKL 480
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 86/205 (41%), Gaps = 50/205 (24%)
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+ V D+ + H+ ++ + LW+ T +T G+ LL LQ L
Sbjct: 62 IPVDDSILVHVSKLTEVTSLWIIGTEITDQGLTLLRDLQGL------------------- 102
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVG 245
+ L + +Q+S+ G ++ P++ + L G TK+ +
Sbjct: 103 -----QSLYITNNQISDAG---IQQLPQVKLVELTLGG-TKITD---------------- 137
Query: 246 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 305
SL N + L LN+ +T VSD L +S FK+L L L +TD + Q+
Sbjct: 138 ------ESLKHFSNSSDLNTLNVGKTAVSDRGLQYVSQFKKLERLYLHETQITDEGMQQI 191
Query: 306 SSLSKLTNLSIRDAVLTNSGLGSFK 330
L L +L + + +T+SGL + +
Sbjct: 192 QGLKNLKSLMLNETEITDSGLTALR 216
>gi|348503268|ref|XP_003439187.1| PREDICTED: hypothetical protein LOC100705990 [Oreochromis
niloticus]
Length = 894
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 147/327 (44%), Gaps = 32/327 (9%)
Query: 33 SLERLPAHLADSLLRHLIRRRLIFPSLLEVF-KHNAEAIELRGENSVDAEWMAYLGAFRY 91
SL L LA+ LL H+ RL+ P LE+F + L E + L AF
Sbjct: 467 SLAGLTPELAELLLNHMSHERLLHPRTLELFFGCPIQKFVLNSYPYSTNELLRQLRAFTA 526
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
L+ L++ + +T S L L+ + L+ L+L+ C K+TD+ ++H+ + L L L +T
Sbjct: 527 LKHLSLVNSPLITDSGLCILSTLVKLQYLNLASCSKLTDSCLQHITGLKNLCFLSLDQTK 586
Query: 152 LTADGIAL-LSSLQN-LSVLDLGGLPVTDLVLRSLQV-LTKLEYLDLWGSQVSNRGAAVL 208
+T G+ L L S+ + LS L L VT+ L L + +L L + ++V + A L
Sbjct: 587 VTDAGMVLYLQSVPSCLSQLSLNQTAVTETTLAVLPTSVPQLRLLSIKQTKVKDLTA--L 644
Query: 209 KMFPRLSFLNLAWTGVTKL--------PNISSL-----------------ECLNLSFIQQ 243
L LNL TGVT+ P ++SL L L+ I
Sbjct: 645 AAMSSLQTLNLDGTGVTEASLEHLATHPALTSLTLVGIPVADGSHALQIISGLKLTRITL 704
Query: 244 VGAETDLVLSLTALQNLNHLERLNL-EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 302
G + L+ L L L L+L + TQ++D + LST L LSL N +TD L
Sbjct: 705 PGRHSVTDSGLSFLSRLTLLSELDLTDYTQITDQGVSHLSTLTRLKKLSLSNTQVTDAGL 764
Query: 303 HQLSSLSKLTNLSIRDAVLTNSGLGSF 329
L + +L L + +T+ G+
Sbjct: 765 PSLRCMQELQELCLDRTAVTSRGVADL 791
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 87/172 (50%), Gaps = 27/172 (15%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE------------- 149
VT S L L+ +T L ELDL+ ++TD G+ HL +++ L+KL LS
Sbjct: 710 VTDSGLSFLSRLTLLSELDLTDYTQITDQGVSHLSTLTRLKKLSLSNTQVTDAGLPSLRC 769
Query: 150 -----------TGLTADGIA-LLSSLQNLSVLDLGGLPVTDLVLR-SLQVLTKLEYLDLW 196
T +T+ G+A L++ L +L VL L V D V+R L ++L L+L
Sbjct: 770 MQELQELCLDRTAVTSRGVADLITCLPHLQVLGLASTQVGDNVVRKGLIRCSQLVKLNLS 829
Query: 197 GSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAET 248
+++++ G LK RL+ +NL TGV+ + S L C N++ I+ T
Sbjct: 830 RTRITDHGLKYLKQM-RLAQVNLDGTGVSLMGIASLLSCTNINSIRASNTRT 880
>gi|283778672|ref|YP_003369427.1| hypothetical protein Psta_0882 [Pirellula staleyi DSM 6068]
gi|283437125|gb|ADB15567.1| hypothetical protein Psta_0882 [Pirellula staleyi DSM 6068]
Length = 450
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 5/217 (2%)
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
VTDA + L I +++L+L T L+ G+A L+ L +L L L LP+ D L+ L
Sbjct: 215 VTDAVLPKLAKIPEIKRLFLGSTKLSGGGLATLAPLVDLEYLSLKQLPIDDRDLQELPEF 274
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAE 247
KL L L ++V++ G L P+ + L+ W T++ + LE +S ++ +
Sbjct: 275 PKLMSLGLDFTEVTDAG---LTKLPKFAMLDTLWLDATRVTDEGMLEVAKISTLRSLFMP 331
Query: 248 TDLVL--SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 305
V + L L L L+L+ Q+ D L L + + L L + ++TD + QL
Sbjct: 332 ATQVKGPGFSHLMKLASLRYLSLKGVQLDDVALQHLVGLENIEILGLDHTNVTDKQIEQL 391
Query: 306 SSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 342
+++L L + +T+ + S RSL+ + LHG
Sbjct: 392 VGMTRLKTLWLSKTAVTDGAIESLSKIRSLQTVYLHG 428
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 81/177 (45%), Gaps = 9/177 (5%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
+D + L F L SL + D VT + L L L L L +VTD GM +
Sbjct: 263 IDDRDLQELPEFPKLMSLGL-DFTEVTDAGLTKLPKFAMLDTLWLD-ATRVTDEGMLEVA 320
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
ISTL L++ T + G + L L +L L L G+ + D+ L+ L L +E L L
Sbjct: 321 KISTLRSLFMPATQVKGPGFSHLMKLASLRYLSLKGVQLDDVALQHLVGLENIEILGLDH 380
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNL--SFIQQVGAE 247
+ V+++ L RL L L+ T VT L I SL+ + L S + GAE
Sbjct: 381 TNVTDKQIEQLVGMTRLKTLWLSKTAVTDGAIESLSKIRSLQTVYLHGSEVSADGAE 437
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 61/132 (46%), Gaps = 2/132 (1%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
V E M + LRSL + +V L + L+ L L + V++ D ++HL+
Sbjct: 311 VTDEGMLEVAKISTLRSLFMP-ATQVKGPGFSHLMKLASLRYLSL-KGVQLDDVALQHLV 368
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
+ +E L L T +T I L + L L L VTD + SL + L+ + L G
Sbjct: 369 GLENIEILGLDHTNVTDKQIEQLVGMTRLKTLWLSKTAVTDGAIESLSKIRSLQTVYLHG 428
Query: 198 SQVSNRGAAVLK 209
S+VS GA L+
Sbjct: 429 SEVSADGAERLR 440
>gi|149177419|ref|ZP_01856023.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
gi|148843752|gb|EDL58111.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
Length = 375
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 142/303 (46%), Gaps = 21/303 (6%)
Query: 70 IELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVT 129
++ RG +D + + +LRSL + + +T +AL ++ +T L+ LDL C +
Sbjct: 77 VDFRG-TKIDDAALKEIAGLSHLRSLLLNETP-ITDAALESVGKVTTLENLDLRNC-SLN 133
Query: 130 DAGMKHLLSISTLEKLWLS-ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLT 188
+ + +L +S L+ L LS + + D +A ++ L NL L L L V+ L L+ L
Sbjct: 134 NKAISYLTGLSKLKALRLSGNSDIDDDAMADINQLTNLKALMLDFLWVSGDGLSQLKDLN 193
Query: 189 KLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT--------KLPNISSLECLNLSF 240
KLE L L + V + G A L FP+L L+ ++ K+P + ++ S
Sbjct: 194 KLEELYLAKTLVDDDGLATLTQFPKLKKTRLSQNQISDEGLAVFAKIPQLEEIDLSENSL 253
Query: 241 IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 300
+ G + L L L++LNL + ++DA + PL L L+L N LT+
Sbjct: 254 LSDAG--------MKHLSGLGKLKKLNLWRVGLTDAGVEPLQGLTSLEWLNLDNTRLTNA 305
Query: 301 SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPR 360
L L + KL L + +++ GL +P SLK L L +TE + + K P
Sbjct: 306 GLKYLKDMQKLEFLHLGSTAVSDEGLKHLEPLTSLKELKLT-RTAVTEKGVAELKKKLPN 364
Query: 361 IEV 363
E+
Sbjct: 365 TEI 367
>gi|374586212|ref|ZP_09659304.1| hypothetical protein Lepil_2392 [Leptonema illini DSM 21528]
gi|373875073|gb|EHQ07067.1| hypothetical protein Lepil_2392 [Leptonema illini DSM 21528]
Length = 346
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 135/297 (45%), Gaps = 22/297 (7%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
+ DAE M L + + L L++ + T +AL L G LKEL+LS +TDAG+K
Sbjct: 60 GATDAE-MPRLLSMQRLEKLSLG-GQNYTDAALVHLAGFKHLKELNLSTG-PITDAGLKS 116
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ I TLEKL L+ET +T G+A L L L L L VTD + S+ + LE L L
Sbjct: 117 IGQIKTLEKLDLAETKITDAGVADLVGLSRLKDLSLIDTAVTDACMTSIMQMKSLEILQL 176
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLS-- 253
+ +++RG L RL L L T VT ++ ++ Q+ + V S
Sbjct: 177 NMTGITDRGVEQLIQHQRLRKLILGGTAVTD---------ESVGYVAQIANLDEAVFSRT 227
Query: 254 ------LTALQNLNHLERLNLEQTQVSDATLFP-LSTFKELIHLSLRNASLTDVSLHQLS 306
L L+ +L RL L T V D L L EL L L + +T ++ ++
Sbjct: 228 KIRGKGLVRLRQAKNLRRLWLADTSVDDDDLIELLQPPMELDMLHLGHLKITGKTMEAIA 287
Query: 307 SLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEV 363
+ + +L + + N L P LK + + +T+D + F K P + V
Sbjct: 288 RCNCVKDLYVGYTKIGNDDLLKLIPATRLKSITVTKTR-VTDDGYIPFHKARPDVIV 343
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 13/167 (7%)
Query: 167 SVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW----- 221
+V D L TD + L + +LE L L G ++ L F L LNL+
Sbjct: 52 AVKDWYALGATDAEMPRLLSMQRLEKLSLGGQNYTDAALVHLAGFKHLKELNLSTGPITD 111
Query: 222 TGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTA-LQNLNHLERLNLEQTQVSDATLFP 280
G+ + I +LE L+L AET + + A L L+ L+ L+L T V+DA +
Sbjct: 112 AGLKSIGQIKTLEKLDL-------AETKITDAGVADLVGLSRLKDLSLIDTAVTDACMTS 164
Query: 281 LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLG 327
+ K L L L +TD + QL +L L + +T+ +G
Sbjct: 165 IMQMKSLEILQLNMTGITDRGVEQLIQHQRLRKLILGGTAVTDESVG 211
>gi|325110089|ref|YP_004271157.1| hypothetical protein Plabr_3538 [Planctomyces brasiliensis DSM
5305]
gi|324970357|gb|ADY61135.1| leucine-rich repeat-containing protein [Planctomyces brasiliensis
DSM 5305]
Length = 451
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 130/285 (45%), Gaps = 26/285 (9%)
Query: 69 AIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV 128
A+ LR + V E + LG LR L++ ++ L AL + + + L R K+
Sbjct: 159 ALRLR-QTDVSDEGLKALGGLDKLRELDLR-FTNISDEGLPALAELDSISTVKLDRT-KI 215
Query: 129 TDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLT 188
+D G+K L +I T+ L L+ T LT + L L L++ + D + L+ ++
Sbjct: 216 SDEGVKTLAAIPTIRGLGLNLTNLTNTALEALKERSELVTLEMDDTQIDDAGIVHLEGMS 275
Query: 189 KLEYLDLWGSQVSNRGAAV---LKMFPRLSFLN--LAWTGVTKLPNISSLECLNL--SFI 241
L+ L L V + G + LK RLS + ++ G L N+ +LE L+L +FI
Sbjct: 276 NLQNLSLRRDDVGDEGFEIIGKLKSLKRLSIRDTVISDAGCAHLANLENLETLDLNETFI 335
Query: 242 QQVGAE---------------TDLVLSLTA-LQNLNHLERLNLEQTQVSDATLFPLSTFK 285
G T + TA LQNL L LNLE T++ D+ L PL+
Sbjct: 336 GDEGVAHLGGLKNLKTLELWFTRITPQGTAPLQNLTALRELNLEDTRIDDSALEPLAGLT 395
Query: 286 ELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 330
EL L+L+ +TD L L L L + + + +++ G + K
Sbjct: 396 ELRTLNLKLTPITDEGLVHLHGLKNLEFVHLGNTQVSDEGTDALK 440
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 125/279 (44%), Gaps = 19/279 (6%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
RS+ AD AL LTG ++EL L T AGM L ++ L L L +T
Sbjct: 90 FRSVEAAD------DALTHLTGTPQVQELYL-FGPGFTSAGMSDLQGLNDLRLLSLEKTL 142
Query: 152 LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF 211
+ G+ + + +L L L V+D L++L L KL LDL + +S+ G L
Sbjct: 143 IDDAGLVEIGRIPSLVALRLRQTDVSDEGLKALGGLDKLRELDLRFTNISDEGLPALAEL 202
Query: 212 PRLSFLNLAWT-----GVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERL 266
+S + L T GV L I ++ L L+ +L AL+ + L L
Sbjct: 203 DSISTVKLDRTKISDEGVKTLAAIPTIRGLGLNLTNLTNT------ALEALKERSELVTL 256
Query: 267 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 326
++ TQ+ DA + L L +LSLR + D + L L LSIRD V++++G
Sbjct: 257 EMDDTQIDDAGIVHLEGMSNLQNLSLRRDDVGDEGFEIIGKLKSLKRLSIRDTVISDAGC 316
Query: 327 GSFKPPRSLKLLDLHGGWLLTED-AILQFCKMHPRIEVW 364
+L+ LDL+ ++ E A L K +E+W
Sbjct: 317 AHLANLENLETLDLNETFIGDEGVAHLGGLKNLKTLELW 355
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 93/198 (46%), Gaps = 12/198 (6%)
Query: 60 LEVFKHNAEAIELRGENS-VDAEWMAYLGAFRYLRSLNVADCRR--VTSSALWALTGMTC 116
LE K +E + L +++ +D + +L L++L++ RR V + +
Sbjct: 244 LEALKERSELVTLEMDDTQIDDAGIVHLEGMSNLQNLSL---RRDDVGDEGFEIIGKLKS 300
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 176
LK L + V ++DAG HL ++ LE L L+ET + +G+A L L+NL L+L +
Sbjct: 301 LKRLSIRDTV-ISDAGCAHLANLENLETLDLNETFIGDEGVAHLGGLKNLKTLELWFTRI 359
Query: 177 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNIS 231
T LQ LT L L+L +++ + L L LNL T G+ L +
Sbjct: 360 TPQGTAPLQNLTALRELNLEDTRIDDSALEPLAGLTELRTLNLKLTPITDEGLVHLHGLK 419
Query: 232 SLECLNLSFIQQVGAETD 249
+LE ++L Q TD
Sbjct: 420 NLEFVHLGNTQVSDEGTD 437
>gi|430746590|ref|YP_007205719.1| hypothetical protein Sinac_5908 [Singulisphaera acidiphila DSM
18658]
gi|430018310|gb|AGA30024.1| hypothetical protein Sinac_5908 [Singulisphaera acidiphila DSM
18658]
Length = 506
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 141/319 (44%), Gaps = 56/319 (17%)
Query: 65 HNAEAIELRGENSVD--AEWMAYLGAFRYLRSLNVADCRRVTSSA--LWALTGMTCLKEL 120
H E ++G + + MA L L+ L+V R T S L L G T L L
Sbjct: 148 HGVEWFTIQGHAAPNLTPAGMAQLRTLSRLKGLSV---RGFTDSHGFLAGLMGKTRLSHL 204
Query: 121 DLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL------ 174
L VTD M + ++ LE L L +T G A +++L+ LS+LD+ G+
Sbjct: 205 RLPEAA-VTDDEMAIIGGLTDLEVLQLDGRNVTDRGFAHVANLKELSLLDMPGVRITDLA 263
Query: 175 PVTDLV--------------------------LRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
PVTDLV L L+ LT L L L +Q+ +R AV
Sbjct: 264 PVTDLVQLDVLGLSPDRATFARSVPSPGGPSSLGPLRGLTNLTQLTLGATQIEDRELAVA 323
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLE---- 264
P+LS+L + +T+ L+ + + + T L + T++ +L L
Sbjct: 324 AGLPKLSYLMIGGRRITEA---------GLARLAESKSLTGLRFTDTSIADLRPLSPRLH 374
Query: 265 ---RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVL 321
L +E + ++DA L PLS + L++ + +TD LH L+ L L L + + +
Sbjct: 375 ALWGLYMENSALTDAGLEPLSDATRIGDLTITGSRMTDAGLHHLAPLPSLWKLRLGRSAI 434
Query: 322 TNSGLGSFKPPRSLKLLDL 340
T++GLG K +SL+ L L
Sbjct: 435 TDAGLGRLKSLKSLETLSL 453
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
+T + L L+ T + +L ++ ++TDAG+ HL + +L KL L + +T G+ L S
Sbjct: 386 LTDAGLEPLSDATRIGDLTITGS-RMTDAGLHHLAPLPSLWKLRLGRSAITDAGLGRLKS 444
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
L++L L L +TD + +L L+ L+L S +S G LK
Sbjct: 445 LKSLETLSLTETKLTDSSVETLAGFQSLKSLNLDRSGISPAGIERLK 491
>gi|168701212|ref|ZP_02733489.1| hypothetical protein GobsU_16936 [Gemmata obscuriglobus UQM 2246]
Length = 410
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 128/271 (47%), Gaps = 20/271 (7%)
Query: 108 LWALTGMTCLKELDLSRCV-------KVTDAGMKHLLSISTLEKLWLSETGLTADGIALL 160
L AL G++ L SR +TDAG+ L +I L L L +T G L
Sbjct: 146 LAALDGLSALSLHGTSRGATSAGSYRGITDAGLNELRAIKGLTDLSLGGIEVTDAGARTL 205
Query: 161 SSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA 220
+++ L VL L G +TD L +L LT+L +DL ++V++ G L F +L+ + L+
Sbjct: 206 ATMPQLRVLGLEGTKITDAALENLAPLTELTEIDLTFTKVTDAGLKHLARFKKLTRVRLS 265
Query: 221 WT-----GVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
T GV +L + L L+LS+ + A V +L A N L ++LE+T+V D
Sbjct: 266 STAVTDAGVRELAALPELTDLDLSYTK---AGDGGVTALAAAP--NRLTSVSLEKTRVGD 320
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSL 335
L+ L L+L + D + L++ LT L++ +T+ G+ S R L
Sbjct: 321 EGAKALAAAPGLTRLNLGYTRVGDDGVSALAAAPNLTGLTLVATRVTDDGVRSLFACRKL 380
Query: 336 KLLDLHGGWLLTEDAILQFCKMHP--RIEVW 364
++L +T+ AI + K P R+ W
Sbjct: 381 AYVELR-ETEVTDGAIRELLKARPGCRLRSW 410
>gi|108763744|ref|YP_632240.1| leucine-rich repeat-containing protein [Myxococcus xanthus DK 1622]
gi|108467624|gb|ABF92809.1| leucine-rich repeat domain protein [Myxococcus xanthus DK 1622]
Length = 624
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 101/209 (48%), Gaps = 15/209 (7%)
Query: 126 VKVTDAGMKHLLSI---STLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLR 182
V TD G HL S+ + LE L L+ T +T G+A L ++ L+VL L PV+D L
Sbjct: 145 VSGTDFGNAHLASLENATQLEALHLNATRVTNVGLAPLKRMRRLAVLRLDETPVSDAGLA 204
Query: 183 SLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLN 237
SL T L + L G+ VS +G L P L L+L+ T V LP + L LN
Sbjct: 205 SLSEHTTLRRVTLAGTAVSPQGLGFLARQPGLEELDLSDTAVDDTVLAVLPG-APLHTLN 263
Query: 238 LSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 297
LS + A L L + L RL L +T SDA+L ++ +EL L L + +
Sbjct: 264 LSGTKVTNA------GLRGLSAMPSLRRLGLARTAASDASLLHITGLRELEALHLGSTQV 317
Query: 298 TDVSLHQLSSLSKLTNLSIRDAVLTNSGL 326
TD L L+ L L L + A + +GL
Sbjct: 318 TDAGLLHLAKLPALRALVLSKARIRGAGL 346
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 123/282 (43%), Gaps = 57/282 (20%)
Query: 75 ENSVDAEWMAYL-GAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCV------- 126
+ +VD +A L GA L +LN++ + VT++ L L+ M L+ L L+R
Sbjct: 243 DTAVDDTVLAVLPGA--PLHTLNLSGTK-VTNAGLRGLSAMPSLRRLGLARTAASDASLL 299
Query: 127 ----------------KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLD 170
+VTDAG+ HL + L L LS+ + G+ L+ L L L
Sbjct: 300 HITGLRELEALHLGSTQVTDAGLLHLAKLPALRALVLSKARIRGAGLRHLAGLSRLEALH 359
Query: 171 LGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNI 230
L V D LR L+ L +L LDL + ++ TG+ +L +
Sbjct: 360 LDDTLVGDSALRHLRGLNELRELDLSRTAITG-------------------TGLQELSTL 400
Query: 231 SSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 290
+LE L LS + A TD SLTAL L+ L RL L T + L L + L HL
Sbjct: 401 VALESLWLSGL----ALTD--DSLTALAPLSQLTRLALSHTPIGPEALNHLGSRPLLRHL 454
Query: 291 SLRNASLTD---VSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 329
L TD S+ Q + L +L +LT++GLG F
Sbjct: 455 DLSKTGFTDEWVPSIRQ--AFPGLHSLKAERTLLTDAGLGQF 494
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 116/260 (44%), Gaps = 31/260 (11%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
EA+ L G V + +L LR+L ++ R + + L L G++ L+ L L +
Sbjct: 308 EALHL-GSTQVTDAGLLHLAKLPALRALVLSKAR-IRGAGLRHLAGLSRLEALHLDDTL- 364
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
V D+ ++HL ++ L +L LS T +T G+ LS+L L L L GL +TD L +L L
Sbjct: 365 VGDSALRHLRGLNELRELDLSRTAITGTGLQELSTLVALESLWLSGLALTDDSLTALAPL 424
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK--LPNISSLECLNLSFIQQVG 245
++L L L + + L P L L+L+ TG T +P+I
Sbjct: 425 SQLTRLALSHTPIGPEALNHLGSRPLLRHLDLSKTGFTDEWVPSIR-------------- 470
Query: 246 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 305
Q L L E+T ++DA L + + EL + + + L +L
Sbjct: 471 ------------QAFPGLHSLKAERTLLTDAGLGQFAEWTELEAIHVAGTLINGSGLTRL 518
Query: 306 SSLSKLTNLSIRDAVLTNSG 325
+L++LT L + L + G
Sbjct: 519 HTLARLTTLDLGATRLDSEG 538
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 82/203 (40%), Gaps = 34/203 (16%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRV---TSSALWALTGMTCLKELDLSRCVKVTDA 131
+ E + +LG+ LR L+++ S A G+ LK + +TDA
Sbjct: 434 HTPIGPEALNHLGSRPLLRHLDLSKTGFTDEWVPSIRQAFPGLHSLK----AERTLLTDA 489
Query: 132 GMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLE 191
G+ + LE + ++ T + G+ L +L L+ LDLG + ++LQ TKL
Sbjct: 490 GLGQFAEWTELEAIHVAGTLINGSGLTRLHTLARLTTLDLGATRLDSEGQKALQGFTKLV 549
Query: 192 YLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLV 251
+L + G + G +L PR SL L L+ + A
Sbjct: 550 WLSVAGVRT---GDEMLGHLPR------------------SLRTLYLTRTKVTDA----- 583
Query: 252 LSLTALQNLNHLERLNLEQTQVS 274
L AL L HL L+L T VS
Sbjct: 584 -GLPALHKLPHLRELDLRGTAVS 605
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 43/87 (49%)
Query: 254 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 313
L +L+N LE L+L T+V++ L PL + L L L ++D L LS + L
Sbjct: 155 LASLENATQLEALHLNATRVTNVGLAPLKRMRRLAVLRLDETPVSDAGLASLSEHTTLRR 214
Query: 314 LSIRDAVLTNSGLGSFKPPRSLKLLDL 340
+++ ++ GLG L+ LDL
Sbjct: 215 VTLAGTAVSPQGLGFLARQPGLEELDL 241
>gi|442319589|ref|YP_007359610.1| hypothetical protein MYSTI_02610 [Myxococcus stipitatus DSM 14675]
gi|441487231|gb|AGC43926.1| hypothetical protein MYSTI_02610 [Myxococcus stipitatus DSM 14675]
Length = 600
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 129/288 (44%), Gaps = 38/288 (13%)
Query: 108 LWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLS 167
L AL T + L L +VTDAG+ HL + L + L ET ++ G+A L L L
Sbjct: 134 LGALRDFTAWEALHLD-GTRVTDAGLPHLSGLRRLSVVRLEETAISDKGLAFLEGLTTLR 192
Query: 168 VLDLGGLPVTDLVLRSLQVLTKLEYLDL-----------W------------GSQVSNRG 204
+ L G V+ LR L +LE+LDL W G+QV++ G
Sbjct: 193 RVGLAGTSVSAQGLRFLSAQAELEWLDLSDTSTDDRVLAWVSGAHLHTLILSGTQVTDAG 252
Query: 205 AAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSFIQQVGAETDLVLSLTALQN 259
A L+ P L++L LA TG+T + + +LE L+L Q A L L
Sbjct: 253 LARLRDMPHLTWLGLARTGLTDGGLAPIGALRALEALHLGETQVTDA------GLLHLAE 306
Query: 260 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 319
LE L L +T++ L L+ L L L + L D ++ L L L L +
Sbjct: 307 SKSLEALVLTKTRLHGPGLQHLAGLTRLELLHLDDTRLDDAAMRHLRGLVALRELELSRT 366
Query: 320 VLTNSGLGSFKPPRSLKLLDLHGGWLLTED--AILQFCKMHPRIEVWH 365
++T +GL S +L+ L + G +T D A+LQ + R+++ H
Sbjct: 367 LITGAGLASLDALSALERLGV-SGLAVTADALAVLQKTERLTRLDLSH 413
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 122/269 (45%), Gaps = 16/269 (5%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
EA+ L GE V + +L + L +L + R + L L G+T L+ L L +
Sbjct: 287 EALHL-GETQVTDAGLLHLAESKSLEALVLTKTR-LHGPGLQHLAGLTRLELLHLDD-TR 343
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
+ DA M+HL + L +L LS T +T G+A L +L L L + GL VT L LQ
Sbjct: 344 LDDAAMRHLRGLVALRELELSRTLITGAGLASLDALSALERLGVSGLAVTADALAVLQKT 403
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPR-LSFLNLAWTGVTK--LPNISSLECLNLSFIQQV 244
+L LDL + V G L P L L+L+ T LP++ LS +Q +
Sbjct: 404 ERLTRLDLSHTPV---GPEALAHVPSGLRELDLSRTAFNDEWLPSLR-----RLSRLQSL 455
Query: 245 GAETDLV--LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 302
AE L+ L L L L L L+L T V+ + L L L HL L L
Sbjct: 456 RAERTLLTDLGLGQLGELTELAALHLSGTLVNGSGLAHLQRLPHLAHLDLGATWLEAHYT 515
Query: 303 HQLSSLSKLTNLSIRDAVLTNSGLGSFKP 331
L L++LT LS+ L ++ LG P
Sbjct: 516 PALQGLTRLTWLSLARGRLGDAALGHLPP 544
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 110/258 (42%), Gaps = 58/258 (22%)
Query: 99 DCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIA 158
D R+ +A+ L G+ L+EL+LSR + +T AG+ L ++S LE+L +S +TAD +A
Sbjct: 340 DDTRLDDAAMRHLRGLVALRELELSRTL-ITGAGLASLDALSALERLGVSGLAVTADALA 398
Query: 159 LLSSLQNLSVLDLGGLPV------------------------------------------ 176
+L + L+ LDL PV
Sbjct: 399 VLQKTERLTRLDLSHTPVGPEALAHVPSGLRELDLSRTAFNDEWLPSLRRLSRLQSLRAE 458
Query: 177 ----TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA--WTGVTKLPNI 230
TDL L L LT+L L L G+ V+ G A L+ P L+ L+L W P +
Sbjct: 459 RTLLTDLGLGQLGELTELAALHLSGTLVNGSGLAHLQRLPHLAHLDLGATWLEAHYTPAL 518
Query: 231 SSLECLN-LSFIQQVGAETDLVLSLTALQNLN-HLERLNLEQTQVSDATLFPLSTFKELI 288
L L LS + L AL +L L L L +T V+DA L L + L
Sbjct: 519 QGLTRLTWLSLARGR-------LGDAALGHLPPGLHTLYLTRTGVTDAGLDSLRSLPHLR 571
Query: 289 HLSLRNASLTDVSLHQLS 306
L LR ++TD + LS
Sbjct: 572 QLDLRGTAVTDAARDALS 589
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 110/249 (44%), Gaps = 16/249 (6%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
+T L + + L+ L L +VTDAG+ HL +LE L L++T L G+ L+
Sbjct: 272 LTDGGLAPIGALRALEALHLGE-TQVTDAGLLHLAESKSLEALVLTKTRLHGPGLQHLAG 330
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT 222
L L +L L + D +R L+ L L L+L + ++ G A L L L ++
Sbjct: 331 LTRLELLHLDDTRLDDAAMRHLRGLVALRELELSRTLITGAGLASLDALSALERLGVSGL 390
Query: 223 GVTKLPNISSLECLNLSFIQQVGAETDLVLSLTAL--QNLNH----LERLNLEQTQVSDA 276
VT L+ +Q+ T L LS T + + L H L L+L +T +D
Sbjct: 391 AVT---------ADALAVLQKTERLTRLDLSHTPVGPEALAHVPSGLRELDLSRTAFNDE 441
Query: 277 TLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLK 336
L L L L LTD+ L QL L++L L + ++ SGL + L
Sbjct: 442 WLPSLRRLSRLQSLRAERTLLTDLGLGQLGELTELAALHLSGTLVNGSGLAHLQRLPHLA 501
Query: 337 LLDLHGGWL 345
LDL WL
Sbjct: 502 HLDLGATWL 510
>gi|156406568|ref|XP_001641117.1| predicted protein [Nematostella vectensis]
gi|156228254|gb|EDO49054.1| predicted protein [Nematostella vectensis]
Length = 803
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 148/333 (44%), Gaps = 38/333 (11%)
Query: 33 SLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNA-EAIELRGENSVDAEWMAYLGAFRY 91
+L LP ++ D ++ L+ + + P +L F I+L V + +A L R
Sbjct: 426 TLGVLPHNVCDKIISRLVEDKALTPKVLHAFISCCLRYIKLDCYLLVTNDLLAELRFHRQ 485
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM----KHLLSISTLEKLWL 147
L L++ C +T AL A+ + L L L K++D G+ H I TL L L
Sbjct: 486 LVHLSIKSCPIITDKALEAVVDLPALTTLQLDN-TKISDKGLMYFSGHANCIQTLVHLSL 544
Query: 148 SETGLTADGIALLSSLQNLSVLDLGGLPVTDL-VLRSLQVLTKLEYLDLWGSQVSNRGAA 206
+ TG+T G A L+ + L +L L +T L V+R LQ L+ L++ + V++
Sbjct: 545 NGTGVTNQGTASLADWKILRILGLENTKITSLDVIRHLQ---HLKTLNVAFTGVTDECLV 601
Query: 207 VLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERL 266
L P LS LN+ T VT + L+ L LS L L+ +N
Sbjct: 602 ALNSHPSLSSLNILQTSVTDR-GLQHLKGLPLSS-----------LDLSDYRN------- 642
Query: 267 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 326
++D+ + ++ L L L N LTD + QLS L+KL L++ V+T+ G
Sbjct: 643 ------ITDSGVQYIAGMTSLTRLLLSNTRLTDEGMVQLSGLAKLVELNVDRTVVTDKGS 696
Query: 327 GSFKPPRSLKLLDLHGGWL---LTEDAILQFCK 356
+L++L L + L D +L CK
Sbjct: 697 RVLSNFANLQILGLSSTGVTDKLLRDGVLNRCK 729
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 93/182 (51%), Gaps = 9/182 (4%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
V E + L + L SLN+ VT L L G+ L LDLS +TD+G++++
Sbjct: 595 VTDECLVALNSHPSLSSLNILQTS-VTDRGLQHLKGLP-LSSLDLSDYRNITDSGVQYIA 652
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
+++L +L LS T LT +G+ LS L L L++ VTD R L L+ L L
Sbjct: 653 GMTSLTRLLLSNTRLTDEGMVQLSGLAKLVELNVDRTVVTDKGSRVLSNFANLQILGLSS 712
Query: 198 SQVSNR--GAAVLKMFPRLSFLNLAWTGVT----KLPNISSLECLNLSFIQQVGAETDLV 251
+ V+++ VL +L LNL+ T VT K ++SL LNL + +V A+ L+
Sbjct: 713 TGVTDKLLRDGVLNRCKKLCKLNLSRTSVTNRGIKHLELNSLTLLNLDWT-RVTADCGLL 771
Query: 252 LS 253
L+
Sbjct: 772 LT 773
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 153/376 (40%), Gaps = 65/376 (17%)
Query: 5 RESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSL-LEVF 63
R E++ C++ +S + V+ + R + RL ++ L +R + P + L V
Sbjct: 371 RRQEMIAQCLQRFAESNQEVEDILQLHRDVPRLEDLCITNVSLRLAGQRHLQPLVTLGVL 430
Query: 64 KHNA--EAIELRGENSVDAEWMAYLGAF-----RYLRSLNVADCRR-VTSSALWALTGMT 115
HN + I E+ A L AF RY++ DC VT+ L L
Sbjct: 431 PHNVCDKIISRLVEDK--ALTPKVLHAFISCCLRYIK----LDCYLLVTNDLLAELRFHR 484
Query: 116 CLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP 175
L L + C +TD ++ ++ + L L L T ++ G+ S N
Sbjct: 485 QLVHLSIKSCPIITDKALEAVVDLPALTTLQLDNTKISDKGLMYFSGHAN---------- 534
Query: 176 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLEC 235
+ L +L L G+ V+N+G A L + L L L T +T
Sbjct: 535 ----------CIQTLVHLSLNGTGVTNQGTASLADWKILRILGLENTKIT---------- 574
Query: 236 LNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 295
SL +++L HL+ LN+ T V+D L L++ L L++
Sbjct: 575 -----------------SLDVIRHLQHLKTLNVAFTGVTDECLVALNSHPSLSSLNILQT 617
Query: 296 SLTDVSLHQLSSLSKLTNLSIRDA-VLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQF 354
S+TD L L L L++L + D +T+SG+ SL L L LT++ ++Q
Sbjct: 618 SVTDRGLQHLKGL-PLSSLDLSDYRNITDSGVQYIAGMTSLTRL-LLSNTRLTDEGMVQL 675
Query: 355 CKMHPRIEVWHELSVI 370
+ +E+ + +V+
Sbjct: 676 SGLAKLVELNVDRTVV 691
>gi|46445682|ref|YP_007047.1| hypothetical protein pc0048 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46399323|emb|CAF22772.1| hypothetical protein pc0048 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 531
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 104/204 (50%), Gaps = 12/204 (5%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N +A+ L+ +++ + +A L + L+ LN++ C ++T+ L + L+ L+LS C
Sbjct: 322 NLKALHLQACHNLTDDGLASLTSLTNLQYLNLSCCDKLTNKGLAHFKSLIALQYLNLSGC 381
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDLGGLP-VTDLVLRS 183
+TDAG+ HL + L+ L LS D G+A L L L L+L G +TD L
Sbjct: 382 AFITDAGLAHLKPLVALQYLNLSGCAFITDAGLAHLKPLVALQYLNLSGCAFITDAGLAH 441
Query: 184 LQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECL 236
L L L++LDL W + ++N G L L LNL+ G+T L ++++L+ L
Sbjct: 442 LTPLVTLKHLDLSWCNSLTNAGLERLASLVALQHLNLSGCIYLTEAGLTHLTSLTNLQQL 501
Query: 237 NLSFIQQVGAETDLVLSLTALQNL 260
NL+ + D+ LT + L
Sbjct: 502 NLNHCEHFA---DVRFKLTHFRTL 522
>gi|290977929|ref|XP_002671689.1| LRR_RI domain-containing protein [Naegleria gruberi]
gi|284085260|gb|EFC38945.1| LRR_RI domain-containing protein [Naegleria gruberi]
Length = 434
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 146/300 (48%), Gaps = 27/300 (9%)
Query: 33 SLERLPAHLADSLLRHLIRRRLIFPSL--LEVFKHNAEAIELRGENSVDAEWMA-YLGAF 89
S + ++ DS+ +I + FP+L LE+ G+N + A +
Sbjct: 96 SFRVVGSYFIDSINAEIISKS--FPNLKRLEI-----------GDNQQFGDCGAESISKI 142
Query: 90 RYLRSLNVADCRRVTSSA--LWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWL 147
+ L SLNV DC + A + L G+T L + K+ D+GMK + +S+L L +
Sbjct: 143 KTLTSLNVLDCGITSKGAEFIGLLNGLTYLNIGN----NKIMDSGMKFIGKLSSLNVLQI 198
Query: 148 SETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAV 207
T +T++ L+ ++ L+ L + PVT +S+ + L+ L++ + +S G
Sbjct: 199 GSTEITSESFKLVGCMKGLTSLSIYSNPVTIEDAKSISSIHGLKSLNISNTGISVEGLKY 258
Query: 208 LKMFPRLSFLNLAWTGVTK--LPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA +T L +IS ++ + F+Q + D L+ + NL
Sbjct: 259 LSALTLLTNLSLAKNNITNEGLLSISQMKQITKLFLQHNVIDCDGAQLLSTMTNL---RL 315
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 325
LN+ QT+++ + +++ K + L++ L D +L +SS+++LTNLS + LT+ G
Sbjct: 316 LNISQTKITTEGIKHITSLKNITSLNISINQLNDEALKLVSSMNQLTNLSTHNNKLTSEG 375
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 69/150 (46%), Gaps = 10/150 (6%)
Query: 75 ENSVDAEWMAYLGAFRYLRSL----NVADCRRVTSSALWALTGMTCLKELDLSRCVKVTD 130
+N++ E + + + + L NV DC L+ MT L+ L++S+ K+T
Sbjct: 272 KNNITNEGLLSISQMKQITKLFLQHNVIDC-----DGAQLLSTMTNLRLLNISQ-TKITT 325
Query: 131 AGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKL 190
G+KH+ S+ + L +S L + + L+SS+ L+ L +T + + L L
Sbjct: 326 EGIKHITSLKNITSLNISINQLNDEALKLVSSMNQLTNLSTHNNKLTSEGAKHISQLNNL 385
Query: 191 EYLDLWGSQVSNRGAAVLKMFPRLSFLNLA 220
L++ + V GA L L +N++
Sbjct: 386 TELNISSNPVRIEGANYLNQMTTLKIINVS 415
>gi|46446906|ref|YP_008271.1| hypothetical protein pc1272 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400547|emb|CAF23996.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 618
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 144/288 (50%), Gaps = 20/288 (6%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N + + L+ ++ +AYL L+ LN+A C + ++ L LT + L+ L+LS C
Sbjct: 252 NLKVLHLQECRNLTDAGLAYLTPLTTLQHLNLAGC-KFANAGLAHLTPLVALQHLNLSHC 310
Query: 126 VKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGL-PVTDLVLRS 183
+TDAG+ HL ++ L L LS +T G+A L+ L L+ L+L +TD L
Sbjct: 311 RNLTDAGLPHLTLLTALTYLNLSHCRNITDAGLAHLTPLTALTYLNLSSCNNLTDAGLAH 370
Query: 184 LQVLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECL 236
L LT L YL+L + +++ G A L L+ LNL+W G+ L + +L+ L
Sbjct: 371 LTPLTALTYLNLSSCNNLTDAGLAHLTPLVTLTHLNLSWCYNFTDAGLAHLTPLVALQHL 430
Query: 237 NLSFIQQVGAETDLVLS-LTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHLSLRN 294
+L + + TD L+ LT L L H LNL +DA L L+ L HL L
Sbjct: 431 DLGHCRNI---TDAGLAHLTPLVALTH---LNLSWCYNFTDAGLAHLAPLVALQHLDLNG 484
Query: 295 A-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDL 340
LTD L L+ L LT+L + LT++GL P +L+ LDL
Sbjct: 485 CWQLTDAGLAHLAPLVALTHLDLSSCNHLTDAGLPHLTPLVALQHLDL 532
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 122/258 (47%), Gaps = 16/258 (6%)
Query: 70 IELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVT 129
+ L N++ +A+L L LN++ C +T + L LT + L L+LS C T
Sbjct: 355 LNLSSCNNLTDAGLAHLTPLTALTYLNLSSCNNLTDAGLAHLTPLVTLTHLNLSWCYNFT 414
Query: 130 DAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG-GLPVTDLVLRSLQVL 187
DAG+ HL + L+ L L +T G+A L+ L L+ L+L TD L L L
Sbjct: 415 DAGLAHLTPLVALQHLDLGHCRNITDAGLAHLTPLVALTHLNLSWCYNFTDAGLAHLAPL 474
Query: 188 TKLEYLDLWGS-QVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSF 240
L++LDL G Q+++ G A L L+ L+L+ G+ L + +L+ L+LS+
Sbjct: 475 VALQHLDLNGCWQLTDAGLAHLAPLVALTHLDLSSCNHLTDAGLPHLTPLVALQHLDLSY 534
Query: 241 IQQVGAETDLVLSLTALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNA-SLT 298
+ + TD L L L L LNL +DA L L+ L L+L + T
Sbjct: 535 CRNL---TD--AGLAHLAPLVALTHLNLSSCNHFTDAGLTHLTPLLALQDLNLNYCENFT 589
Query: 299 DVSLHQLSSLSKLTNLSI 316
D L SL+ NL++
Sbjct: 590 DAGLAHFKSLATFPNLNL 607
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 99/306 (32%), Positives = 146/306 (47%), Gaps = 22/306 (7%)
Query: 47 RHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSS 106
R+L L + + L +H + L G +A +A+L L+ LN++ CR +T +
Sbjct: 262 RNLTDAGLAYLTPLTTLQH----LNLAGCKFANAG-LAHLTPLVALQHLNLSHCRNLTDA 316
Query: 107 ALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE-TGLTADGIALLSSLQN 165
L LT +T L L+LS C +TDAG+ HL ++ L L LS LT G+A L+ L
Sbjct: 317 GLPHLTLLTALTYLNLSHCRNITDAGLAHLTPLTALTYLNLSSCNNLTDAGLAHLTPLTA 376
Query: 166 LSVLDLGGL-PVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFL------ 217
L+ L+L +TD L L L L +L+L W ++ G A L L L
Sbjct: 377 LTYLNLSSCNNLTDAGLAHLTPLVTLTHLNLSWCYNFTDAGLAHLTPLVALQHLDLGHCR 436
Query: 218 NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDA 276
N+ G+ L + +L LNLS+ TD L L L L+ L+L Q++DA
Sbjct: 437 NITDAGLAHLTPLVALTHLNLSWCYNF---TD--AGLAHLAPLVALQHLDLNGCWQLTDA 491
Query: 277 TLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDA-VLTNSGLGSFKPPRS 334
L L+ L HL L + + LTD L L+ L L +L + LT++GL P +
Sbjct: 492 GLAHLAPLVALTHLDLSSCNHLTDAGLPHLTPLVALQHLDLSYCRNLTDAGLAHLAPLVA 551
Query: 335 LKLLDL 340
L L+L
Sbjct: 552 LTHLNL 557
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 126/291 (43%), Gaps = 56/291 (19%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
+ LN + +T + L AL LK L L C +TDAG+ +L ++TL+ L L+
Sbjct: 228 IEELNFSKNASLTDAHLLALKNCKNLKVLHLQECRNLTDAGLAYLTPLTTLQHLNLAGCK 287
Query: 152 LTADGIALLSSLQNLSVLDLGGL--------------------------PVTDLVLRSLQ 185
G+A L+ L L L+L +TD L L
Sbjct: 288 FANAGLAHLTPLVALQHLNLSHCRNLTDAGLPHLTLLTALTYLNLSHCRNITDAGLAHLT 347
Query: 186 VLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQV 244
LT L YL+L + +++ G A L L++LNL+ C NL
Sbjct: 348 PLTALTYLNLSSCNNLTDAGLAHLTPLTALTYLNLS-------------SCNNL------ 388
Query: 245 GAETDLVLS-LTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHLSLRNA-SLTDVS 301
TD L+ LT L L H LNL +DA L L+ L HL L + ++TD
Sbjct: 389 ---TDAGLAHLTPLVTLTH---LNLSWCYNFTDAGLAHLTPLVALQHLDLGHCRNITDAG 442
Query: 302 LHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 351
L L+ L LT+L++ T++GL P +L+ LDL+G W LT+ +
Sbjct: 443 LAHLTPLVALTHLNLSWCYNFTDAGLAHLAPLVALQHLDLNGCWQLTDAGL 493
>gi|168705463|ref|ZP_02737740.1| leucine-rich repeat domain protein [Gemmata obscuriglobus UQM 2246]
Length = 362
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 150/326 (46%), Gaps = 40/326 (12%)
Query: 70 IELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVT 129
+ LRG+ DA+ A L L L+++ VT + L L +T L L+L K+T
Sbjct: 48 VMLRGKTVTDADLKA-LAPLTGLTDLDLSSTP-VTDAGLKHLAPLTKLTALNLG-GTKIT 104
Query: 130 DAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLG----------------- 172
DAG L ++ L L LS T +T G+ ++ L+ L LDL
Sbjct: 105 DAGPTELAPLAVLTDLNLSSTQVTDAGLKEVARLRTLVALDLSHTGVTNAGLGHLTLTKM 164
Query: 173 ------GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT- 225
G +TD LR +++++ + LDL G+ +++ G L +F ++ L+L+ T VT
Sbjct: 165 RSLSLRGTKITDGGLREIRIMS-VSGLDLSGTALTDEGLKDLGLFEEITGLDLSDTKVTS 223
Query: 226 ----KLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPL 281
+L + +L+ L+LS + A L L L LE L L T V+ + L
Sbjct: 224 NGLKELASQPTLKFLSLSRTKVGDA------GLKHLAPLKRLESLYLNGTGVTGTGVKEL 277
Query: 282 STFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 341
+ + L L L +T L LS+L +L L + DA +T+ GL ++L LDL+
Sbjct: 278 APLERLRILELTGTMVTGGGLKHLSTLPRLAILRLSDAAVTDEGLKDIAHLKTLLALDLY 337
Query: 342 GGWLLTEDAILQFCKMHPRIEV-WHE 366
+T + + K PR ++ W E
Sbjct: 338 -RTKVTGAGVAELRKALPRCDIGWKE 362
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 97/189 (51%), Gaps = 5/189 (2%)
Query: 39 AHLADSLLRHLIRR--RLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLN 96
HL + +R L R ++ L E+ + ++L G D E + LG F + L+
Sbjct: 157 GHLTLTKMRSLSLRGTKITDGGLREIRIMSVSGLDLSGTALTD-EGLKDLGLFEEITGLD 215
Query: 97 VADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADG 156
++D + VTS+ L L LK L LSR KV DAG+KHL + LE L+L+ TG+T G
Sbjct: 216 LSDTK-VTSNGLKELASQPTLKFLSLSRT-KVGDAGLKHLAPLKRLESLYLNGTGVTGTG 273
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF 216
+ L+ L+ L +L+L G VT L+ L L +L L L + V++ G + L
Sbjct: 274 VKELAPLERLRILELTGTMVTGGGLKHLSTLPRLAILRLSDAAVTDEGLKDIAHLKTLLA 333
Query: 217 LNLAWTGVT 225
L+L T VT
Sbjct: 334 LDLYRTKVT 342
>gi|348682865|gb|EGZ22681.1| hypothetical protein PHYSODRAFT_491927 [Phytophthora sojae]
Length = 648
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 140/307 (45%), Gaps = 29/307 (9%)
Query: 63 FKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDL 122
F A+ L G +VD + + L L SL + CR++T + L M L++L +
Sbjct: 249 FSTKLAALNLSGCVNVDDKSLKALSELEQLTSLQLVGCRKLTDKGVKYLAKMAKLEKLRI 308
Query: 123 SRCVKVTDAGMKHL-LSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP-VTDLV 180
+RC K+TDA ++ + L +L ++ L+ + + +++L VL + G + D
Sbjct: 309 ARCRKLTDAALEDFAMMFPKLRELDVANCRLSEKALQYIGQIKSLEVLVIRGCQDICDDG 368
Query: 181 LRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK--------LPNISS 232
+ SL L L+Y D ++ ++ ++ + +L L L +T + L N+
Sbjct: 369 MSSLSGLANLKYFD---ARHCSKIHSIPTEWTQLEVLLLGYTAFAESDAAVLQYLTNLHE 425
Query: 233 LE---CL----NLSFIQQVGAETDLVLSLTALQNLNHLE---------RLNLEQTQVSDA 276
LE C FI ++ L L TAL + LE LN+ T++SD
Sbjct: 426 LELRKCRIMKRGFQFISRLTHLERLELGETALTDSGLLEICNSAKSLKALNISNTEISDN 485
Query: 277 TLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLK 336
L+ KEL L L +T+ +L LS L++L L + A +T++GL P L+
Sbjct: 486 GAAGLAKLKELRILRLDTPGITNRALANLSFLARLERLDLFGANITDNGLMHLVPLHKLQ 545
Query: 337 LLDLHGG 343
L + GG
Sbjct: 546 ELSICGG 552
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 114/226 (50%), Gaps = 16/226 (7%)
Query: 79 DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL- 137
DA + YL L L + CR + ++ +T L+ L+L +TD+G+ +
Sbjct: 413 DAAVLQYL---TNLHELELRKCR-IMKRGFQFISRLTHLERLELGE-TALTDSGLLEICN 467
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
S +L+ L +S T ++ +G A L+ L+ L +L L +T+ L +L L +LE LDL+G
Sbjct: 468 SAKSLKALNISNTEISDNGAAGLAKLKELRILRLDTPGITNRALANLSFLARLERLDLFG 527
Query: 198 SQVSNRGAAVLKMFPRLSFL-----NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVL 252
+ +++ G L +L L N+ GV + ++SL LNLS + + +
Sbjct: 528 ANITDNGLMHLVPLHKLQELSICGGNIGDRGVGLISKLTSLTSLNLSQNRNIRTK----- 582
Query: 253 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLT 298
SL L+ L L LNL T +S +L LS+ KEL LS+ SL+
Sbjct: 583 SLFYLRALTGLRCLNLSNTGISALSLRHLSSLKELQSLSVYGCSLS 628
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 150/338 (44%), Gaps = 35/338 (10%)
Query: 69 AIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV 128
A +G + E + L L +LN++ C V +L AL+ + L L L C K+
Sbjct: 230 AASFQGCTGLTKESIEMLRFSTKLAALNLSGCVNVDDKSLKALSELEQLTSLQLVGCRKL 289
Query: 129 TDAGMKHLLSISTLEKLWLSE----TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL 184
TD G+K+L ++ LEKL ++ T + A++ L LD+ +++ L+ +
Sbjct: 290 TDKGVKYLAKMAKLEKLRIARCRKLTDAALEDFAMM--FPKLRELDVANCRLSEKALQYI 347
Query: 185 QVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFLNL-AWTGVTKLPNI-SSLECLNLSFI 241
+ LE L + G Q + + G + L L + + + + +P + LE L L +
Sbjct: 348 GQIKSLEVLVIRGCQDICDDGMSSLSGLANLKYFDARHCSKIHSIPTEWTQLEVLLLGYT 407
Query: 242 QQVGAETDLVLSLTALQN------------------LNHLERLNLEQTQVSDATLFPL-S 282
++ ++ LT L L HLERL L +T ++D+ L + +
Sbjct: 408 AFAESDAAVLQYLTNLHELELRKCRIMKRGFQFISRLTHLERLELGETALTDSGLLEICN 467
Query: 283 TFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 342
+ K L L++ N ++D L+ L +L L + +TN L + L+ LDL G
Sbjct: 468 SAKSLKALNISNTEISDNGAAGLAKLKELRILRLDTPGITNRALANLSFLARLERLDLFG 527
Query: 343 GWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNG 380
+T++ ++ +H ELS IC + IG G
Sbjct: 528 AN-ITDNGLMHLVPLHK----LQELS-ICGGN-IGDRG 558
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 127/303 (41%), Gaps = 40/303 (13%)
Query: 69 AIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGM-TCLKELDLSRCVK 127
+++L G + + + YL L L +A CR++T +AL M L+ELD++ C +
Sbjct: 280 SLQLVGCRKLTDKGVKYLAKMAKLEKLRIARCRKLTDAALEDFAMMFPKLRELDVANC-R 338
Query: 128 VTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLD---------------- 170
+++ ++++ I +LE L + + DG++ LS L NL D
Sbjct: 339 LSEKALQYIGQIKSLEVLVIRGCQDICDDGMSSLSGLANLKYFDARHCSKIHSIPTEWTQ 398
Query: 171 -----LGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 225
LG + LQ LT L L+L ++ RG + L L L T +T
Sbjct: 399 LEVLLLGYTAFAESDAAVLQYLTNLHELELRKCRIMKRGFQFISRLTHLERLELGETALT 458
Query: 226 K------LPNISSLECLNLSF--IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDAT 277
+ SL+ LN+S I GA L L L L L+ +++
Sbjct: 459 DSGLLEICNSAKSLKALNISNTEISDNGA--------AGLAKLKELRILRLDTPGITNRA 510
Query: 278 LFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKL 337
L LS L L L A++TD L L L KL LSI + + G+G SL
Sbjct: 511 LANLSFLARLERLDLFGANITDNGLMHLVPLHKLQELSICGGNIGDRGVGLISKLTSLTS 570
Query: 338 LDL 340
L+L
Sbjct: 571 LNL 573
>gi|168701675|ref|ZP_02733952.1| hypothetical protein GobsU_19277 [Gemmata obscuriglobus UQM 2246]
Length = 407
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 85/172 (49%), Gaps = 26/172 (15%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 176
L LDL+ +VTDAG+K L ++ L L LS T +T +G+ L++L L+ L LGG V
Sbjct: 92 LTTLDLT-FTRVTDAGVKALAALKALTTLDLSHTLVTDEGLKELAALGALNTLGLGGTSV 150
Query: 177 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
TD ++ L L L LDL V++ GA L L+ L +++TGVT
Sbjct: 151 TDAGVKELAALKGLTALDLGSMGVTDAGAKELSGLTGLTALGMSFTGVTDAG-------- 202
Query: 237 NLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELI 288
V L AL+NL HLE L T V+DA + L+ K L+
Sbjct: 203 --------------VKELAALKNLTHLE---LAATGVTDAGVKELAALKSLV 237
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 90/201 (44%), Gaps = 23/201 (11%)
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGI--------ALLSSLQNLSVLDLGGLPVT 177
+VTD G+K L ++ L L LS T +T G+ L+ L+ LDL VT
Sbjct: 44 TRVTDTGLKELAALKGLTTLDLSYTEVTDAGVKALAALKALTALGLKGLTTLDLTFTRVT 103
Query: 178 DLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISS 232
D +++L L L LDL + V++ G L L+ L L T GV +L +
Sbjct: 104 DAGVKALAALKALTTLDLSHTLVTDEGLKELAALGALNTLGLGGTSVTDAGVKELAALKG 163
Query: 233 LECLNLS--FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 290
L L+L + GA+ L L L L + T V+DA + L+ K L HL
Sbjct: 164 LTALDLGSMGVTDAGAKE--------LSGLTGLTALGMSFTGVTDAGVKELAALKNLTHL 215
Query: 291 SLRNASLTDVSLHQLSSLSKL 311
L +TD + +L++L L
Sbjct: 216 ELAATGVTDAGVKELAALKSL 236
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 33/207 (15%)
Query: 142 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLT--------KLEYL 193
+ K+ LS T +T G+ L++L+ L+ LDL VTD +++L L L L
Sbjct: 36 VTKVSLSFTRVTDTGLKELAALKGLTTLDLSYTEVTDAGVKALAALKALTALGLKGLTTL 95
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLS 253
DL ++V++ G L L+ L+L+ T VT
Sbjct: 96 DLTFTRVTDAGVKALAALKALTTLDLSHTLVTDE-------------------------G 130
Query: 254 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 313
L L L L L L T V+DA + L+ K L L L + +TD +LS L+ LT
Sbjct: 131 LKELAALGALNTLGLGGTSVTDAGVKELAALKGLTALDLGSMGVTDAGAKELSGLTGLTA 190
Query: 314 LSIRDAVLTNSGLGSFKPPRSLKLLDL 340
L + +T++G+ ++L L+L
Sbjct: 191 LGMSFTGVTDAGVKELAALKNLTHLEL 217
>gi|290973802|ref|XP_002669636.1| predicted protein [Naegleria gruberi]
gi|284083186|gb|EFC36892.1| predicted protein [Naegleria gruberi]
Length = 548
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 133/285 (46%), Gaps = 15/285 (5%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N + + ++ + +L +L++ D + + L+ +T L +L+L ++ DAG
Sbjct: 147 GHNEIGNDGAKHVSSLTHLTALDLFD-NGIGPNGAQRLSSLTNLTQLNLGN-NEIGDAGA 204
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
+H+ S++ L +L L T L A+G+ L L+ L+ LDL G + + +L L L+ L
Sbjct: 205 EHISSLTNLTQLNLRITKLGANGVKSLRGLKKLTELDLSGNQIGYEGVNNLSELKNLKKL 264
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLE-CLNLSFIQQVGAETDLVL 252
+L ++++ GA L L+ L+L +++L N++ + CLN I GAE
Sbjct: 265 NLGNNRITGDGAERLCGLENLTELDLRAEHLSQLKNLTQINLCLN--QIGPNGAE----- 317
Query: 253 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 312
L L +L +LNL + L + L L L + D +LS L KLT
Sbjct: 318 ---RLCELTNLTQLNLRSNLIGAIKAESLCKLENLTQLDLGYNRIEDDGAQRLSKLKKLT 374
Query: 313 NLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKM 357
L + + + G S +L LDL+G + ED K+
Sbjct: 375 QLDLSGNQIGSIGAQSLSELTNLTHLDLNGNGI--EDGAQHLSKL 417
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 110/265 (41%), Gaps = 42/265 (15%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDL------------- 122
N + E + L + L+ LN+ + R+T L G+ L ELDL
Sbjct: 245 NQIGYEGVNNLSELKNLKKLNLGN-NRITGDGAERLCGLENLTELDLRAEHLSQLKNLTQ 303
Query: 123 -SRCV-KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLV 180
+ C+ ++ G + L ++ L +L L + A L L+NL+ LDLG + D
Sbjct: 304 INLCLNQIGPNGAERLCELTNLTQLNLRSNLIGAIKAESLCKLENLTQLDLGYNRIEDDG 363
Query: 181 LRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSF 240
+ L L KL LDL G+Q+ + GA L L+ L+L G+
Sbjct: 364 AQRLSKLKKLTQLDLSGNQIGSIGAQSLSELTNLTHLDLNGNGI---------------- 407
Query: 241 IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 300
+ GA+ L L L RL L ++ D LS +L HLSL N + D
Sbjct: 408 --EDGAQ--------HLSKLKKLTRLGLNDNRIGDDGAKYLSELNKLTHLSLDNNGIGDT 457
Query: 301 SLHQLSSLSKLTNLSIRDAVLTNSG 325
LS L +T LS+ D + +G
Sbjct: 458 GAECLSKLKNITYLSLDDNEIETAG 482
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 96/220 (43%), Gaps = 34/220 (15%)
Query: 152 LTADGIALL--------SSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNR 203
LT DG+ L+ + L NL+ LDL + V++ L LT L+ L+L +++ N
Sbjct: 95 LTIDGVELIEEQCGTISTKLVNLTQLDLCRNKIKPTVVKGLSSLTNLKKLNLGHNEIGND 154
Query: 204 GAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHL 263
GA + L+ L+L G+ PN GA+ L +L +L
Sbjct: 155 GAKHVSSLTHLTALDLFDNGIG--PN---------------GAQ--------RLSSLTNL 189
Query: 264 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
+LNL ++ DA +S+ L L+LR L + L L KLT L + +
Sbjct: 190 TQLNLGNNEIGDAGAEHISSLTNLTQLNLRITKLGANGVKSLRGLKKLTELDLSGNQIGY 249
Query: 324 SGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEV 363
G+ + ++LK L+L G +T D + C + E+
Sbjct: 250 EGVNNLSELKNLKKLNL-GNNRITGDGAERLCGLENLTEL 288
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 97/206 (47%), Gaps = 17/206 (8%)
Query: 112 TGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDL 171
T + L +LDL R K+ +K L S++ L+KL L + DG +SSL +L+ LDL
Sbjct: 112 TKLVNLTQLDLCR-NKIKPTVVKGLSSLTNLKKLNLGHNEIGNDGAKHVSSLTHLTALDL 170
Query: 172 GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTK 226
+ + L LT L L+L +++ + GA + L+ LNL T GV
Sbjct: 171 FDNGIGPNGAQRLSSLTNLTQLNLGNNEIGDAGAEHISSLTNLTQLNLRITKLGANGVKS 230
Query: 227 LPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 286
L + L L+LS Q+G E + L L +L++LNL +++ L +
Sbjct: 231 LRGLKKLTELDLSG-NQIGYE-----GVNNLSELKNLKKLNLGNNRITGDGAERLCGLEN 284
Query: 287 LIHLSLRNASLTDVSLHQLSSLSKLT 312
L L LR L+ QL +L+++
Sbjct: 285 LTELDLRAEHLS-----QLKNLTQIN 305
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 62/140 (44%), Gaps = 3/140 (2%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N ++ + L + L L+++ ++ S +L+ +T L LDL+ + G
Sbjct: 355 GYNRIEDDGAQRLSKLKKLTQLDLSG-NQIGSIGAQSLSELTNLTHLDLNG--NGIEDGA 411
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
+HL + L +L L++ + DG LS L L+ L L + D L L + YL
Sbjct: 412 QHLSKLKKLTRLGLNDNRIGDDGAKYLSELNKLTHLSLDNNGIGDTGAECLSKLKNITYL 471
Query: 194 DLWGSQVSNRGAAVLKMFPR 213
L +++ G L+ R
Sbjct: 472 SLDDNEIETAGKKHLRKLIR 491
>gi|149175123|ref|ZP_01853746.1| hypothetical protein PM8797T_25626 [Planctomyces maris DSM 8797]
gi|148846101|gb|EDL60441.1| hypothetical protein PM8797T_25626 [Planctomyces maris DSM 8797]
Length = 1079
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 103/215 (47%), Gaps = 26/215 (12%)
Query: 100 CRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIAL 159
C + AL + +T L L LS V D+G+ L ++ LE+L+L T +T G+
Sbjct: 88 CPHLGDEALLYIRDLTNLDTLMLSESA-VGDSGLSCLKKLNKLERLYLDNTKVTDAGLQH 146
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL 219
LSSL+ L VL L L VTD +++L L LE L L G+QVS+ G L +L L L
Sbjct: 147 LSSLKQLKVLSLRNLNVTDQGMQTLADLNNLEVLFLSGTQVSDAGLKSLTELKQLKILYL 206
Query: 220 AWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLF 279
A T +T G++ L+AL L LE L+L +T++ +
Sbjct: 207 ARTAIT-------------------GSQ------LSALNTLESLEHLSLNRTKLQPVVVD 241
Query: 280 PLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 314
LS +L L ++ L + S+ QL + TN+
Sbjct: 242 ALSGLTQLKGLEIQYTGLGESSIQQLKRNLEKTNI 276
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 78/138 (56%), Gaps = 11/138 (7%)
Query: 208 LKMFPRLSFL-----NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNH 262
L+ FPRL +L +L + + ++++L+ L LS VG L+ L+ LN
Sbjct: 75 LEQFPRLDYLAMVCPHLGDEALLYIRDLTNLDTLMLS-ESAVGDS-----GLSCLKKLNK 128
Query: 263 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 322
LERL L+ T+V+DA L LS+ K+L LSLRN ++TD + L+ L+ L L + ++
Sbjct: 129 LERLYLDNTKVTDAGLQHLSSLKQLKVLSLRNLNVTDQGMQTLADLNNLEVLFLSGTQVS 188
Query: 323 NSGLGSFKPPRSLKLLDL 340
++GL S + LK+L L
Sbjct: 189 DAGLKSLTELKQLKILYL 206
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 87/172 (50%), Gaps = 5/172 (2%)
Query: 147 LSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAA 206
LS+ +T + + L L L + + D L ++ LT L+ L L S V + G +
Sbjct: 62 LSKPHVTLEALNQLEQFPRLDYLAMVCPHLGDEALLYIRDLTNLDTLMLSESAVGDSGLS 121
Query: 207 VLKMFPRLSFLNLAWTGVTK--LPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLE 264
LK +L L L T VT L ++SSL+ L + ++ + TD + L +LN+LE
Sbjct: 122 CLKKLNKLERLYLDNTKVTDAGLQHLSSLKQLKVLSLRNLNV-TDQ--GMQTLADLNNLE 178
Query: 265 RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 316
L L TQVSDA L L+ K+L L L ++T L L++L L +LS+
Sbjct: 179 VLFLSGTQVSDAGLKSLTELKQLKILYLARTAITGSQLSALNTLESLEHLSL 230
>gi|298709085|emb|CBJ31033.1| Hypothetical leucine rich repeat protein [Ectocarpus siliculosus]
Length = 573
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 109/236 (46%), Gaps = 26/236 (11%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 176
L++LDL CV++T++G L ++ LE L LS + + L L L+ L+L V
Sbjct: 299 LRDLDLCGCVRLTESGAHTLSALQDLETLDLSNCRVYSCVEELAQKLPGLTALNLDRCNV 358
Query: 177 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
D +R+L LTKLE L+L + +++ G L RL LNL + +T
Sbjct: 359 GDTGVRALSSLTKLERLNLADTSITDAGMTHLAPLTRLRDLNLFFCHITD---------- 408
Query: 237 NLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 296
L L L++L RLNL+ V DA + L+ + L L + +AS
Sbjct: 409 ---------------AGLGPLAALSNLVRLNLDTRDVGDAGMVQLTRLRLLESLDVFSAS 453
Query: 297 LTDVSL-HQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 351
+TD + H L L LT L + LT+ GL +SL L++ + +T +
Sbjct: 454 ITDFGVAHGLCRLPCLTTLEVCSGRLTDRGLYHLSRVKSLTRLNVSQNFGITAAGV 509
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 99/232 (42%), Gaps = 37/232 (15%)
Query: 10 VRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNAEA 69
+ LC+ + C+ + +K+ LP + D+LL L + R + L F+
Sbjct: 1 MELCVRSICRRMGNFRKFP------SYLPREVVDALLGSLTQHRALSSYALRAFR----- 49
Query: 70 IELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMT----CLKELDLSRC 125
D E + SL + +CR V + + L T C+ LDLS C
Sbjct: 50 ---------DCE----------VTSLALGECRGVRNGWVRELLQATPCGRCIVTLDLSSC 90
Query: 126 VKVTDAGMKHLLSISTLEKLWLSE-TGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRS 183
+TD G+ L ++ +LE L +GL + LS+ L L L P + D + +
Sbjct: 91 TGLTDTGLSDLPALKSLESASLRRCSGLGTEATLCLSNSPGLETLSLAHCPLLDDAAVGN 150
Query: 184 LQVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLE 234
L L++L L+L G + +S+ G + P L+ LN + + ++ LE
Sbjct: 151 LAGLSRLRSLELEGCENISDEGLRLACRLPSLTCLNASRCHGLTVDGLAGLE 202
>gi|348688896|gb|EGZ28710.1| hypothetical protein PHYSODRAFT_322345 [Phytophthora sojae]
Length = 683
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 133/269 (49%), Gaps = 20/269 (7%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE-T 150
+R LN C +VT L +++ + L LD+ C VTD G+ L+ + L+ L+L +
Sbjct: 407 MRFLNFMKCGKVTDKGLRSISKLRNLTSLDMVSCFNVTDDGLNELVGLHRLKSLYLGGCS 466
Query: 151 GLTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDLW-GSQVSNRGAAVL 208
G+ DGIA LS L++L +LDL V + L L L L L+L +++ + G A L
Sbjct: 467 GIRDDGIAALSQLKSLVILDLSNCRQVGNKALLGLGELHNLTNLNLMRCNRIDDEGIAYL 526
Query: 209 KMFPRLSFLNLAW------TGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNH 262
RL LNL+ T + ++ LE + L + ++ TD + L +L
Sbjct: 527 AGLKRLKTLNLSNCRLLTDAATTTIAQMTELESIVLWYCNKL---TD--TGVMNLASLTK 581
Query: 263 LERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRD-A 319
L+ ++L ++++DA L + +L L L N LTD + L ++ LT+L++ +
Sbjct: 582 LQSIDLASCSKLTDACLSTFPSIPKLTSLDLGNCCLLTDEGMATLGKVTSLTSLNLSECG 641
Query: 320 VLTNSGLGSFKPPRSLKLLDLHGGWLLTE 348
+T++GL +L ++L W T+
Sbjct: 642 EITDAGLAHLAALVNLTNINL---WYCTK 667
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 146/315 (46%), Gaps = 27/315 (8%)
Query: 70 IELRGENSVDAEWMAYLGAFRYLRSLNV--ADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ LRG + V + L ++L +LN+ A+ +T + AL G+T L L+LS C +
Sbjct: 258 LSLRGCSQVGDIGIRELARLKHLTTLNLWYANQGNLTDDGISALAGVTSLTSLNLSNCSQ 317
Query: 128 VTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQ 185
+TD G+ L ++ L L + G +T +G+ L+ L +L LD+ G +TD L
Sbjct: 318 LTDVGISSLGALVNLRHLEFANVGEVTDNGLKALAPLVDLITLDIAGCYNITDAGTSVLA 377
Query: 186 VLTKLEYLDLW-GSQVSNRGAAVLKMFPRLSFLNLAWTG---------VTKLPNISSLEC 235
L +LW S++ + ++ ++ FLN G ++KL N++SL+
Sbjct: 378 NFPNLSSCNLWYCSEIGDTTFEHMESLTKMRFLNFMKCGKVTDKGLRSISKLRNLTSLDM 437
Query: 236 LNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRN 294
++ + G L L L+ L+ L L + + D + LS K L+ L L N
Sbjct: 438 VSCFNVTDDG--------LNELVGLHRLKSLYLGGCSGIRDDGIAALSQLKSLVILDLSN 489
Query: 295 A-SLTDVSLHQLSSLSKLTNLS-IRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAIL 352
+ + +L L L LTNL+ +R + + G+ + LK L+L LLT+ A
Sbjct: 490 CRQVGNKALLGLGELHNLTNLNLMRCNRIDDEGIAYLAGLKRLKTLNLSNCRLLTDAATT 549
Query: 353 QFCKMH--PRIEVWH 365
+M I +W+
Sbjct: 550 TIAQMTELESIVLWY 564
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 140/314 (44%), Gaps = 46/314 (14%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
++ LGA LR L A+ VT + L AL + L LD++ C +TDAG L + L
Sbjct: 323 ISSLGALVNLRHLEFANVGEVTDNGLKALAPLVDLITLDIAGCYNITDAGTSVLANFPNL 382
Query: 143 E--KLW-LSETG-LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
LW SE G T + + L+ ++ L+ + G VTD LRS+ L L LD+
Sbjct: 383 SSCNLWYCSEIGDTTFEHMESLTKMRFLNFMKCG--KVTDKGLRSISKLRNLTSLDMVSC 440
Query: 199 -QVSNRGAAVLKMFPRLSFLNLAWT------GVTKLPNISSLECLNLSFIQQVGAETDLV 251
V++ G L RL L L G+ L + SL L+LS +QVG +
Sbjct: 441 FNVTDDGLNELVGLHRLKSLYLGGCSGIRDDGIAALSQLKSLVILDLSNCRQVGNK---- 496
Query: 252 LSLTALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNA--------------- 295
+L L L++L LNL + ++ D + L+ K L L+L N
Sbjct: 497 -ALLGLGELHNLTNLNLMRCNRIDDEGIAYLAGLKRLKTLNLSNCRLLTDAATTTIAQMT 555
Query: 296 -----------SLTDVSLHQLSSLSKLTNLSIRD-AVLTNSGLGSFKPPRSLKLLDLHGG 343
LTD + L+SL+KL ++ + + LT++ L +F L LDL
Sbjct: 556 ELESIVLWYCNKLTDTGVMNLASLTKLQSIDLASCSKLTDACLSTFPSIPKLTSLDLGNC 615
Query: 344 WLLTEDAILQFCKM 357
LLT++ + K+
Sbjct: 616 CLLTDEGMATLGKV 629
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 94/173 (54%), Gaps = 9/173 (5%)
Query: 65 HNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSR 124
HN + L N +D E +AYL + L++LN+++CR +T +A + MT L+ + L
Sbjct: 505 HNLTNLNLMRCNRIDDEGIAYLAGLKRLKTLNLSNCRLLTDAATTTIAQMTELESIVLWY 564
Query: 125 CVKVTDAGMKHLLSISTLEKLWL-SETGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLR 182
C K+TD G+ +L S++ L+ + L S + LT ++ S+ L+ LDLG +TD +
Sbjct: 565 CNKLTDTGVMNLASLTKLQSIDLASCSKLTDACLSTFPSIPKLTSLDLGNCCLLTDEGMA 624
Query: 183 SLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLP 228
+L +T L L+L ++++ G A L L+ +NL + TG+ LP
Sbjct: 625 TLGKVTSLTSLNLSECGEITDAGLAHLAALVNLTNINLWYCTKVTKTGIDHLP 677
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 109/212 (51%), Gaps = 17/212 (8%)
Query: 65 HNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSR 124
H +++ L G + + + +A L + L L++++CR+V + AL L + L L+L R
Sbjct: 455 HRLKSLYLGGCSGIRDDGIAALSQLKSLVILDLSNCRQVGNKALLGLGELHNLTNLNLMR 514
Query: 125 CVKVTDAGMKHLLSISTLEKLWLSETGLTADG----IALLSSLQNLSVLDLGGLPVTDLV 180
C ++ D G+ +L + L+ L LS L D IA ++ L+++ + L TD
Sbjct: 515 CNRIDDEGIAYLAGLKRLKTLNLSNCRLLTDAATTTIAQMTELESIVLWYCNKL--TDTG 572
Query: 181 LRSLQVLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWT------GVTKLPNISSL 233
+ +L LTKL+ +DL S++++ + P+L+ L+L G+ L ++SL
Sbjct: 573 VMNLASLTKLQSIDLASCSKLTDACLSTFPSIPKLTSLDLGNCCLLTDEGMATLGKVTSL 632
Query: 234 ECLNLSFIQQVGAETDLVLS-LTALQNLNHLE 264
LNLS + G TD L+ L AL NL ++
Sbjct: 633 TSLNLS---ECGEITDAGLAHLAALVNLTNIN 661
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 127/282 (45%), Gaps = 43/282 (15%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADG--IALLSSLQNLSVLDLGGL 174
LKE++L+ C +TD ++ L I +E + L D IAL SL + G
Sbjct: 177 LKEVNLTGCSNLTDESVEQLAQIPRMESIALKGCYQVTDKGIIALTESLSSSLTSLNLGY 236
Query: 175 P--VTDLVLRSLQV-LTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWT-------- 222
V+D + ++ L KL YL L G SQV + G L L+ LNL +
Sbjct: 237 CKVVSDEAVSAIAANLPKLNYLSLRGCSQVGDIGIRELARLKHLTTLNLWYANQGNLTDD 296
Query: 223 GVTKLPNISSLECLNLSFIQQVGAETDL-VLSLTALQNLNHLERLNLEQT---------- 271
G++ L ++SL LNLS Q+ TD+ + SL AL NL HLE N+ +
Sbjct: 297 GISALAGVTSLTSLNLSNCSQL---TDVGISSLGALVNLRHLEFANVGEVTDNGLKALAP 353
Query: 272 -------------QVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLS-I 316
++DA L+ F L +L S + D + + SL+K+ L+ +
Sbjct: 354 LVDLITLDIAGCYNITDAGTSVLANFPNLSSCNLWYCSEIGDTTFEHMESLTKMRFLNFM 413
Query: 317 RDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMH 358
+ +T+ GL S R+L LD+ + +T+D + + +H
Sbjct: 414 KCGKVTDKGLRSISKLRNLTSLDMVSCFNVTDDGLNELVGLH 455
>gi|226534342|gb|ACO71447.1| AT4G23840-like protein [Capsella grandiflora]
gi|226534344|gb|ACO71448.1| AT4G23840-like protein [Capsella grandiflora]
gi|226534348|gb|ACO71450.1| AT4G23840-like protein [Capsella grandiflora]
gi|226534352|gb|ACO71452.1| AT4G23840-like protein [Capsella grandiflora]
gi|226534354|gb|ACO71453.1| AT4G23840-like protein [Capsella grandiflora]
gi|226534356|gb|ACO71454.1| AT4G23840-like protein [Capsella grandiflora]
gi|226534358|gb|ACO71455.1| AT4G23840-like protein [Capsella grandiflora]
gi|226534360|gb|ACO71456.1| AT4G23840-like protein [Capsella grandiflora]
gi|226534364|gb|ACO71458.1| AT4G23840-like protein [Capsella grandiflora]
gi|226534366|gb|ACO71459.1| AT4G23840-like protein [Capsella grandiflora]
Length = 90
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 41/53 (77%)
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLS 239
LTKLEYLD+WGS V+N GA + F LSFLNL+WT VT+ PNI LECL+++
Sbjct: 2 LTKLEYLDIWGSNVTNLGAICILKFSNLSFLNLSWTSVTQTPNIPHLECLHMN 54
>gi|406830019|ref|ZP_11089613.1| hypothetical protein SpalD1_00225 [Schlesneria paludicola DSM
18645]
Length = 509
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 116/238 (48%), Gaps = 20/238 (8%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELD-LSR----CVKV 128
G + E ++ + FR LR+L + + L G + EL+ L+R +++
Sbjct: 239 GPKTTIEEVLSAVKQFRSLRTLQLGSSGDASHGLLATADGWKEISELNNLTRLTIIGIEI 298
Query: 129 TDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLT 188
TDAG+K + +S LE L L +T G+ + L+NL+ L L + +TD L L+ L
Sbjct: 299 TDAGLKEISRLSQLESLRLINLKITNQGMKEIGKLKNLTNLGLFDVQLTDAGLNQLRGLQ 358
Query: 189 KLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLE--CLNLSFI 241
+L+ L L + +S+ G + L+FL++ T G+ L +SSL+ CL + I
Sbjct: 359 RLDTLSLNNNPISDEGLRQVGALTSLTFLSVPSTEITDNGLKGLRGLSSLKNLCLASTRI 418
Query: 242 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 299
G L L LN+LE+L+L T+V+ + PL + L L L N ++D
Sbjct: 419 SDDG--------LKGLIGLNNLEQLDLAGTRVTGTGVGPLRELESLHSLGLSNTQISD 468
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 87/190 (45%), Gaps = 25/190 (13%)
Query: 153 TADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFP 212
TADG +S L NL+ L + G+ +TD L+ + L++LE L L +++N+G
Sbjct: 275 TADGWKEISELNNLTRLTIIGIEITDAGLKEISRLSQLESLRLINLKITNQGMKE----- 329
Query: 213 RLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ 272
+ KL N+++L ++ TD L L+ L L+ L+L
Sbjct: 330 -----------IGKLKNLTNLGLFDVQL-------TDA--GLNQLRGLQRLDTLSLNNNP 369
Query: 273 VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPP 332
+SD L + L LS+ + +TD L L LS L NL + +++ GL
Sbjct: 370 ISDEGLRQVGALTSLTFLSVPSTEITDNGLKGLRGLSSLKNLCLASTRISDDGLKGLIGL 429
Query: 333 RSLKLLDLHG 342
+L+ LDL G
Sbjct: 430 NNLEQLDLAG 439
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 111/255 (43%), Gaps = 48/255 (18%)
Query: 135 HLL-SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
HLL S + L L L+ T +T + L L++LS+LDLGG ++D + L L L+ L
Sbjct: 112 HLLKSFNALGTLNLNGTDITDADFSELRDLRHLSLLDLGGTRISDASIEGLSQLKNLKEL 171
Query: 194 DLWGSQVSNRGAAVLK-MFPR-------------LSFLNLAWTGVTKLPNISSLECLNLS 239
+ G+++++ G LK P + + GVT+ ++ + +
Sbjct: 172 WIDGTEITDAGVQSLKEALPNAIVGKDAPDESQAIETIRSLGGGVTRDEAVAGRPVIEVG 231
Query: 240 F--IQQVGAETDLVLSLTALQN-------------------------------LNHLERL 266
F VG +T + L+A++ LN+L RL
Sbjct: 232 FGGFLDVGPKTTIEEVLSAVKQFRSLRTLQLGSSGDASHGLLATADGWKEISELNNLTRL 291
Query: 267 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 326
+ +++DA L +S +L L L N +T+ + ++ L LTNL + D LT++GL
Sbjct: 292 TIIGIEITDAGLKEISRLSQLESLRLINLKITNQGMKEIGKLKNLTNLGLFDVQLTDAGL 351
Query: 327 GSFKPPRSLKLLDLH 341
+ + L L L+
Sbjct: 352 NQLRGLQRLDTLSLN 366
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 129/321 (40%), Gaps = 67/321 (20%)
Query: 72 LRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDA 131
LR +++ L +F L +LN+ + +T + L + L LDL +++DA
Sbjct: 100 LRQNKYFSGKYLHLLKSFNALGTLNL-NGTDITDADFSELRDLRHLSLLDLG-GTRISDA 157
Query: 132 GMKHLLSISTLEKLWLSETGLTADGI-ALLSSLQNLSV---------------------- 168
++ L + L++LW+ T +T G+ +L +L N V
Sbjct: 158 SIEGLSQLKNLKELWIDGTEITDAGVQSLKEALPNAIVGKDAPDESQAIETIRSLGGGVT 217
Query: 169 ------------------LDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG------ 204
LD+G + VL +++ L L L S ++ G
Sbjct: 218 RDEAVAGRPVIEVGFGGFLDVGPKTTIEEVLSAVKQFRSLRTLQLGSSGDASHGLLATAD 277
Query: 205 ----AAVLKMFPRLSFLNLAWTG-----VTKLPNISSLECLNLSFIQQVGAETDLVLSLT 255
+ L RL+ + + T +++L + SL +NL Q +
Sbjct: 278 GWKEISELNNLTRLTIIGIEITDAGLKEISRLSQLESLRLINLKITNQ---------GMK 328
Query: 256 ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLS 315
+ L +L L L Q++DA L L + L LSL N ++D L Q+ +L+ LT LS
Sbjct: 329 EIGKLKNLTNLGLFDVQLTDAGLNQLRGLQRLDTLSLNNNPISDEGLRQVGALTSLTFLS 388
Query: 316 IRDAVLTNSGLGSFKPPRSLK 336
+ +T++GL + SLK
Sbjct: 389 VPSTEITDNGLKGLRGLSSLK 409
>gi|317420071|emb|CBN82107.1| Uncharacterized protein [Dicentrarchus labrax]
Length = 889
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 144/325 (44%), Gaps = 32/325 (9%)
Query: 33 SLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNA-EAIELRGENSVDAEWMAYLGAFRY 91
SL L LA+ LL H+ R RL+ P LE+F + L E + L AF
Sbjct: 462 SLACLTPELAELLLNHMSRERLLRPRTLELFFGCPLQKFVLNCYPYSTNELLRQLRAFTA 521
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
L+ L++ + +T S L + + L+ L+L+ C K+TD+ ++H+ + +L L L +T
Sbjct: 522 LKHLSLVNSPLITDSGLSIFSSLAKLQYLNLASCSKLTDSCLQHITGLKSLCFLSLDQTK 581
Query: 152 LTADGIALL--SSLQNLSVLDLGGLPVTDLVLRSLQV-LTKLEYLDLWGSQVSNRGAAVL 208
+T G+ L S+ LS L L VT+ L L + +L L + ++V + A L
Sbjct: 582 VTDAGMVLYLQSAPSCLSQLSLNQTAVTEASLVVLPTCVPQLRLLSIKQTKVKDVSA--L 639
Query: 209 KMFPRLSFLNLAWTGVTKL--------PNISSLECLNLSFI---QQVGAETDLVLSLTAL 257
L LNL TGVT+ P +SSL + Q + +DL L+ L
Sbjct: 640 ARLSNLQTLNLDVTGVTESSLEHLSSHPTLSSLSLAGIPVADGNQALQIISDLRLTQLTL 699
Query: 258 QNLNHL---------------ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 302
+ + E + TQV+D + LST L LSL N +TD L
Sbjct: 700 PGRHTVTDSGLSFLSRLSLLLELDLTDYTQVTDQGVSQLSTMTRLKKLSLSNTQVTDAGL 759
Query: 303 HQLSSLSKLTNLSIRDAVLTNSGLG 327
L L +L L + +T+ G+
Sbjct: 760 PSLRGLQELQELCLDRTAVTSRGVA 784
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 85/191 (44%), Gaps = 53/191 (27%)
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+VTD G+ L +++ L+KL LS T VTD L SL+
Sbjct: 728 TQVTDQGVSQLSTMTRLKKLSLSNTQ------------------------VTDAGLPSLR 763
Query: 186 VLTKLEYLDLWGSQVSNRGAA-VLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQV 244
L +L+ L L + V++RG A ++ P L L LA T QV
Sbjct: 764 GLQELQELCLDRTAVTSRGVADLITCLPHLQVLGLAST--------------------QV 803
Query: 245 GAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQ 304
G D V+ ++ N L +LNL +T+++D L L + +HL+ N T VSL
Sbjct: 804 G---DTVVRRGVIR-CNQLVKLNLSRTRITDHGLKCL----KHMHLAQVNLDGTGVSLIG 855
Query: 305 LSSLSKLTNLS 315
+++L TN+S
Sbjct: 856 IANLLSFTNIS 866
>gi|296124076|ref|YP_003631854.1| ribonuclease inhibitor [Planctomyces limnophilus DSM 3776]
gi|296016416|gb|ADG69655.1| Leucine-rich repeat, ribonuclease inhibitor subtype [Planctomyces
limnophilus DSM 3776]
Length = 474
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 142/291 (48%), Gaps = 42/291 (14%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N E + LR N +D +A+L LR+L++ VT + +L G++ L++L L +
Sbjct: 178 NLEVLYLRRTNILDPA-LAHLSKLAKLRALDLR-FTNVTDEGMKSLAGLSQLRDLRL-QA 234
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+VTDA + + + L+KL + T G++ L+ + L +L+L +T L L
Sbjct: 235 TRVTDASLPLIAKLPNLQKLNVWGENFTDAGLSQLADTKTLRILELDDTRLTSEGLIKLG 294
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT----------------------- 222
LT LE L + +++ N G AV+K P++ L L T
Sbjct: 295 GLTNLEELHVRRTRIKNDGLAVVKNMPKMRRLLLRDTLCTDPGLEAVSGLKNLVELDLTE 354
Query: 223 ------GVTKLPNISSLECLNL--SFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVS 274
GV L ++SLE L+L + G E+ +++L L+ LNLEQT+++
Sbjct: 355 GIFGDDGVKNLAGLTSLEDLSLWATTTSDAGIES--------IRDLKKLKALNLEQTRIT 406
Query: 275 DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 325
DA ++ F EL L+L +TD +L +L++L KL LS+ + ++ + G
Sbjct: 407 DAAAKTIAGFGELTELNLSQTEVTDATLKELAALKKLKKLSVNNCIMLSGG 457
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 91/184 (49%), Gaps = 11/184 (5%)
Query: 148 SETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAV 207
+ET + D +AL++ L +L+ L L G +TD + L+ LT L L L +Q+++ GA V
Sbjct: 113 AETSIGDDDLALVAKLTHLTELRLEGPKITDKGVLLLKPLTNLVVLGLENTQLTDTGAEV 172
Query: 208 LKMFPRLSFLNLAWTGV-----TKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNH 262
L FP L L L T + L ++ L L+L F + +L L+
Sbjct: 173 LASFPNLEVLYLRRTNILDPALAHLSKLAKLRALDLRFTNVTDE------GMKSLAGLSQ 226
Query: 263 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 322
L L L+ T+V+DA+L ++ L L++ + TD L QL+ L L + D LT
Sbjct: 227 LRDLRLQATRVTDASLPLIAKLPNLQKLNVWGENFTDAGLSQLADTKTLRILELDDTRLT 286
Query: 323 NSGL 326
+ GL
Sbjct: 287 SEGL 290
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 103/233 (44%), Gaps = 18/233 (7%)
Query: 127 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 186
K+TD G+ L ++ L L L T LT G +L+S NL VL L + D L L
Sbjct: 140 KITDKGVLLLKPLTNLVVLGLENTQLTDTGAEVLASFPNLEVLYLRRTNILDPALAHLSK 199
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT--------KLPNISSLECLNL 238
L KL LDL + V++ G L +L L L T VT KLPN+ L
Sbjct: 200 LAKLRALDLRFTNVTDEGMKSLAGLSQLRDLRLQATRVTDASLPLIAKLPNLQKLNVWGE 259
Query: 239 SFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLT 298
+F L+ L + L L L+ T+++ L L L L +R +
Sbjct: 260 NFTDA---------GLSQLADTKTLRILELDDTRLTSEGLIKLGGLTNLEELHVRRTRIK 310
Query: 299 DVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 351
+ L + ++ K+ L +RD + T+ GL + ++L LDL G + +D +
Sbjct: 311 NDGLAVVKNMPKMRRLLLRDTLCTDPGLEAVSGLKNLVELDLTEG-IFGDDGV 362
>gi|149918767|ref|ZP_01907254.1| hypothetical protein PPSIR1_31833 [Plesiocystis pacifica SIR-1]
gi|149820368|gb|EDM79784.1| hypothetical protein PPSIR1_31833 [Plesiocystis pacifica SIR-1]
Length = 541
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 115/262 (43%), Gaps = 16/262 (6%)
Query: 90 RYLRSLNV----ADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+YLR L + DC R L+ L + L+ L+L R VT AG+ HL LE L
Sbjct: 282 QYLRDLPIDELICDCPRFGDRGLFMLRYLEGLQVLELERSA-VTSAGLVHLAENPALEDL 340
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
L L ++G L++L L L +G + D L +L L L+L +R A
Sbjct: 341 TLRGCDLDSEGFTALAALPRLRRLIVGPASLLDGKAEGLGLLVSLRELELGLDGFGDRAA 400
Query: 206 AVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNL 260
L L L+L T G+ L + L L L + L LQ L
Sbjct: 401 QELAPLVNLERLDLGNTAVSDEGLEHLAGMVRLRELELHHTRVTRH------GLEHLQGL 454
Query: 261 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV 320
+ LE L L+ T V D + L+ L L L N +TDV + L+ LS L L++ + V
Sbjct: 455 SALEILELDHTDVVDEGVAHLAKLGALRELRLDNTLITDVGVAHLAKLSDLERLNLANTV 514
Query: 321 LTNSGLGSFKPPRSLKLLDLHG 342
+T+ G+ L++++L G
Sbjct: 515 VTSEGVEVLSALPRLEVVNLAG 536
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 66/120 (55%), Gaps = 1/120 (0%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
V+ L L GM L+EL+L +VT G++HL +S LE L L T + +G+A L+
Sbjct: 419 VSDEGLEHLAGMVRLRELELHHT-RVTRHGLEHLQGLSALEILELDHTDVVDEGVAHLAK 477
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT 222
L L L L +TD+ + L L+ LE L+L + V++ G VL PRL +NLA T
Sbjct: 478 LGALRELRLDNTLITDVGVAHLAKLSDLERLNLANTVVTSEGVEVLSALPRLEVVNLAGT 537
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 69/137 (50%), Gaps = 3/137 (2%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N E ++L G +V E + +L LR L + R VT L L G++ L+ L+L
Sbjct: 408 NLERLDL-GNTAVSDEGLEHLAGMVRLRELELHHTR-VTRHGLEHLQGLSALEILELDHT 465
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
V D G+ HL + L +L L T +T G+A L+ L +L L+L VT + L
Sbjct: 466 -DVVDEGVAHLAKLGALRELRLDNTLITDVGVAHLAKLSDLERLNLANTVVTSEGVEVLS 524
Query: 186 VLTKLEYLDLWGSQVSN 202
L +LE ++L G++ +
Sbjct: 525 ALPRLEVVNLAGTRARD 541
>gi|149174696|ref|ZP_01853321.1| hypothetical protein PM8797T_26210 [Planctomyces maris DSM 8797]
gi|148846390|gb|EDL60728.1| hypothetical protein PM8797T_26210 [Planctomyces maris DSM 8797]
Length = 460
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 117/255 (45%), Gaps = 32/255 (12%)
Query: 92 LRSLNVADCR--RVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
L+ L V R +T+ AL + LK+LDL ++ D GM H+ + L+ L +
Sbjct: 164 LQGLQVLSLRATNITNDALKVVAAFPELKDLDLRFNKEINDEGMPHIKGMKNLKVLKVQA 223
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
T +T +G+ +++L NL L+ G ++D L L+ L L+L +++S+ G LK
Sbjct: 224 TQVTDEGMKDIAALPNLQRLNTWGRNISDETLELLKD-KNLVSLELDDTEISDEGMKYLK 282
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNL--SFIQQVGAETDLVLSLTALQNLNHLERLN 267
+++++E L+L F+ G E +QN+ L+ L+
Sbjct: 283 -------------------DMTNMESLHLRRDFVGNPGIEN--------IQNMKKLQTLH 315
Query: 268 LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLG 327
L T V+D + LS +L +L L + + D L Q+ L KLT L + T+ GL
Sbjct: 316 LRDTVVTDEGMKYLSGLTDLTYLDLDESMIGDQGLEQIKDLKKLTRLGLWGTETTDQGLK 375
Query: 328 SFKPPRSLKLLDLHG 342
L L+L G
Sbjct: 376 VISGFTELNRLNLEG 390
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 133/286 (46%), Gaps = 26/286 (9%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ + LR N + + + + AF L+ L++ + + + + GM LK L + + +
Sbjct: 168 QVLSLRATN-ITNDALKVVAAFPELKDLDLRFNKEINDEGMPHIKGMKNLKVLKV-QATQ 225
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
VTD GMK + ++ L++L ++ + + LL +NL L+L ++D ++ L+ +
Sbjct: 226 VTDEGMKDIAALPNLQRLNTWGRNISDETLELLKD-KNLVSLELDDTEISDEGMKYLKDM 284
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNL--SF 240
T +E L L V N G ++ +L L+L T VT L ++ L L+L S
Sbjct: 285 TNMESLHLRRDFVGNPGIENIQNMKKLQTLHLRDTVVTDEGMKYLSGLTDLTYLDLDESM 344
Query: 241 IQQVGAE--------TDLVL--------SLTALQNLNHLERLNLEQTQVSDATLFPLSTF 284
I G E T L L L + L RLNLE T ++DA L L
Sbjct: 345 IGDQGLEQIKDLKKLTRLGLWGTETTDQGLKVISGFTELNRLNLEGTPITDAGLKQLLPL 404
Query: 285 KELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 330
K+L +L+L ++D L L++L L L + +T+ G+ F+
Sbjct: 405 KKLEYLNLSKTEISDEGLKTLAALKNLKELQLSFTQVTDDGVKQFE 450
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 111/250 (44%), Gaps = 34/250 (13%)
Query: 120 LDLSRCVKVTDAGMKHLLSISTLE---------------------KLW---LSETGLTAD 155
LDL + DA +KHL + +LE KLW L T + +
Sbjct: 98 LDL-KGTNAQDADLKHLAGLPSLERLILWGPNFTDVSTEEIGKKNKLWFLSLESTAIGDE 156
Query: 156 GIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRL 214
G+ LS LQ L VL L +T+ L+ + +L+ LDL + ++++ G +K L
Sbjct: 157 GVKNLSDLQGLQVLSLRATNITNDALKVVAAFPELKDLDLRFNKEINDEGMPHIKGMKNL 216
Query: 215 SFLNLAWTGVTK--LPNISSLECLNLSFIQQVGAE-TDLVLSLTALQNLNHLERLNLEQT 271
L + T VT + +I++L NL + G +D L L +NL LE L+ T
Sbjct: 217 KVLKVQATQVTDEGMKDIAALP--NLQRLNTWGRNISDETLELLKDKNLVSLE---LDDT 271
Query: 272 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP 331
++SD + L + L LR + + + + ++ KL L +RD V+T+ G+
Sbjct: 272 EISDEGMKYLKDMTNMESLHLRRDFVGNPGIENIQNMKKLQTLHLRDTVVTDEGMKYLSG 331
Query: 332 PRSLKLLDLH 341
L LDL
Sbjct: 332 LTDLTYLDLD 341
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 85/160 (53%), Gaps = 3/160 (1%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N E++ LR + V + + + L++L++ D VT + L+G+T L LDL
Sbjct: 286 NMESLHLR-RDFVGNPGIENIQNMKKLQTLHLRDTV-VTDEGMKYLSGLTDLTYLDLDES 343
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+ + D G++ + + L +L L T T G+ ++S L+ L+L G P+TD L+ L
Sbjct: 344 M-IGDQGLEQIKDLKKLTRLGLWGTETTDQGLKVISGFTELNRLNLEGTPITDAGLKQLL 402
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 225
L KLEYL+L +++S+ G L L L L++T VT
Sbjct: 403 PLKKLEYLNLSKTEISDEGLKTLAALKNLKELQLSFTQVT 442
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 74/168 (44%), Gaps = 14/168 (8%)
Query: 151 GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKM 210
G++ DG L +LDL G D L+ L L LE L LWG ++ +
Sbjct: 88 GMSDDGRVL--------ILDLKGTNAQDADLKHLAGLPSLERLILWGPNFTDVSTEEIGK 139
Query: 211 FPRLSFLNLAWT--GVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLE-RLN 267
+L FL+L T G + N+S L+ L + ++ D + + A L L+ R N
Sbjct: 140 KNKLWFLSLESTAIGDEGVKNLSDLQGLQVLSLRATNITNDALKVVAAFPELKDLDLRFN 199
Query: 268 LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLS 315
E ++D + + K L L ++ +TD + +++L L L+
Sbjct: 200 KE---INDEGMPHIKGMKNLKVLKVQATQVTDEGMKDIAALPNLQRLN 244
>gi|414586494|tpg|DAA37065.1| TPA: hypothetical protein ZEAMMB73_067914 [Zea mays]
Length = 400
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 102/236 (43%), Gaps = 35/236 (14%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV------- 128
+ + + L F L SL++ C VT+ A + L LDL RC K+
Sbjct: 170 DQISEHGLKTLSGFSNLTSLSIKKCAAVTAEGAKAFANLVNLVNLDLERCPKINGGLIHL 229
Query: 129 -----------------TDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDL 171
TD+ MK+L ++ L +L LS ++A G++ L L L L+L
Sbjct: 230 KGLKKLEKLNLRYCNGITDSDMKYLSDLTNLRELQLSSCKISAFGVSYLRGLHKLGHLNL 289
Query: 172 GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK----- 226
G VT + L + L L L+L + + G LK +L L+L + +T
Sbjct: 290 EGCAVTAVCLEVISELASLVLLNLSRCGICDEGCENLKGLTKLKALSLGFNQITDACLIH 349
Query: 227 LPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 282
L ++ +LECLNL ++G E L L+ L L+ L L T+V L LS
Sbjct: 350 LKDLVNLECLNLDSC-KIGDE-----GLFHLKGLIQLKNLELSDTEVGSNGLRHLS 399
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 101/246 (41%), Gaps = 36/246 (14%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE-- 149
++SL C +++ L L+G + L L + +C VT G K ++ L L L
Sbjct: 161 MQSLACDYCDQISEHGLKTLSGFSNLTSLSIKKCAAVTAEGAKAFANLVNLVNLDLERCP 220
Query: 150 -----------------------TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 186
G+T + LS L NL L L ++ + L+
Sbjct: 221 KINGGLIHLKGLKKLEKLNLRYCNGITDSDMKYLSDLTNLRELQLSSCKISAFGVSYLRG 280
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSFI 241
L KL +L+L G V+ V+ L LNL+ G+ L ++ L+ L+L F
Sbjct: 281 LHKLGHLNLEGCAVTAVCLEVISELASLVLLNLSRCGICDEGCENLKGLTKLKALSLGFN 340
Query: 242 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 301
Q A L L++L +LE LNL+ ++ D LF L +L +L L + +
Sbjct: 341 QITDA------CLIHLKDLVNLECLNLDSCKIGDEGLFHLKGLIQLKNLELSDTEVGSNG 394
Query: 302 LHQLSS 307
L LS
Sbjct: 395 LRHLSG 400
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 138/364 (37%), Gaps = 61/364 (16%)
Query: 5 RESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFK 64
R LV LC+ C K L LP L+ + L+ + + L F+
Sbjct: 55 RCPSLVELCVAKVC-------KDINMYSDLSLLPRDLSQQIFNELVECGCLTEASLGAFR 107
Query: 65 H-NAEAIELRGENSVDAEWMAYLGA-FRYLRSLNVADCRRVTSSALWALTGMTCLKELDL 122
+ + I L V WM + + + L S++++ C VT S L + ++ L
Sbjct: 108 DCDLQDICLGDYPGVTDAWMEVVASQGQSLLSVDLS-CSDVTDSGFNLLKDCSSMQSLAC 166
Query: 123 SRCVKVTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDL-------GGL 174
C ++++ G+K L S L L + + +TA+G ++L NL LDL GGL
Sbjct: 167 DYCDQISEHGLKTLSGFSNLTSLSIKKCAAVTAEGAKAFANLVNLVNLDLERCPKINGGL 226
Query: 175 ------------------PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF 216
+TD ++ L LT L L L ++S G + L+ +L
Sbjct: 227 IHLKGLKKLEKLNLRYCNGITDSDMKYLSDLTNLRELQLSSCKISAFGVSYLRGLHKLGH 286
Query: 217 LNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDA 276
LNL VT + L + L L LNL + + D
Sbjct: 287 LNLEGCAVT-------------------------AVCLEVISELASLVLLNLSRCGICDE 321
Query: 277 TLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLK 336
L +L LSL +TD L L L L L++ + + GL K LK
Sbjct: 322 GCENLKGLTKLKALSLGFNQITDACLIHLKDLVNLECLNLDSCKIGDEGLFHLKGLIQLK 381
Query: 337 LLDL 340
L+L
Sbjct: 382 NLEL 385
>gi|290991127|ref|XP_002678187.1| predicted protein [Naegleria gruberi]
gi|284091798|gb|EFC45443.1| predicted protein [Naegleria gruberi]
Length = 265
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 111/243 (45%), Gaps = 26/243 (10%)
Query: 84 AYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLE 143
+Y+G + L SLN++DC + + + + + L EL + C + + G K + ++ L
Sbjct: 33 SYIGELKQLNSLNISDCINIGNRGVNVIRELDKLTELHIDNCC-IGEKGAKKIGAMQQLR 91
Query: 144 KLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNR 203
L ++ GL G+A + L++++ L + ++D + + +TKL LD
Sbjct: 92 TLSINGCGLGKKGVASVCKLKDMTKLGIRKNHISDSLALEISQMTKLTELD--------- 142
Query: 204 GAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHL 263
A V + P G + +++L+ L L F +G E + + + L
Sbjct: 143 -AGVNDIGPE---------GAKSISQMTNLKTLLLDF-NDIGKE-----GVKYISGMKQL 186
Query: 264 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
LN+ + + D + +S K L LS+R+ S+ D +S +S LT L I VLT
Sbjct: 187 ISLNISENDIRDKGVKSISEMKNLTCLSVRSNSIGDEGAKYISEMSNLTQLDISCNVLTQ 246
Query: 324 SGL 326
G+
Sbjct: 247 KGI 249
>gi|325182005|emb|CCA16458.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 708
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 144/326 (44%), Gaps = 48/326 (14%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N G + E + LG L SLN+ CR +T L++L + L+ L LS C
Sbjct: 287 NLRVANFEGCLYLKPETIQRLGFSNRLISLNLTGCRLITDKTLYSLRHLFRLQNLHLSGC 346
Query: 126 VKVTDAGMKHLLSISTLEKLWLSE-TGLTADGIALL-SSLQNLSVLDLGGLPVTDLVLRS 183
+T+ G++HL + L++L+L+ ++ +S NL LDL ++D+ L
Sbjct: 347 KWITEKGLQHLNGLFGLKRLYLARCVNVSNQAFRFFPTSFPNLVELDLSHCSISDIALHF 406
Query: 184 LQVLTKLEYLDLWG-SQVSNRG---------------------AAVLKMFPRLSFLNLAW 221
L ++ L L G S+++ +G A + K + +L L LA
Sbjct: 407 TGRLREIHSLMLKGCSRITTKGLSHLGSLSKLRRLDVRYCKHVAGLSKEWTQLDMLKLAC 466
Query: 222 TGVTK-----LPNISSLECLNL----------SFIQQVGAETDLVLSLTAL--------- 257
T + L + +L L+L SF+ + + L ++ TAL
Sbjct: 467 TEFKEADASILATMKTLHELDLRCCLVAKGCFSFVSHLNSLVRLCVAETALTDESLIMLC 526
Query: 258 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 317
++L L+ L++ T+V+D+ + EL L L +T+ SL ++ L KL L++
Sbjct: 527 KSLEKLQMLDVSCTEVTDSGTMEIEMLGELSELHLDTPGITNRSLERVGKLKKLARLNLF 586
Query: 318 DAVLTNSGLGSFKPPRSLKLLDLHGG 343
A +T+ G+ + K L+ LD+ G
Sbjct: 587 AASVTDEGVEALKRLDKLQDLDICSG 612
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 128/284 (45%), Gaps = 34/284 (11%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTS-SALWA---------------- 110
++ L+G + + + +++LG+ LR L+V C+ V S W
Sbjct: 414 HSLMLKGCSRITTKGLSHLGSLSKLRRLDVRYCKHVAGLSKEWTQLDMLKLACTEFKEAD 473
Query: 111 ---LTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADG-IALLSSLQNL 166
L M L ELDL RC V + +++L +L ++ET LT + I L SL+ L
Sbjct: 474 ASILATMKTLHELDL-RCCLVAKGCFSFVSHLNSLVRLCVAETALTDESLIMLCKSLEKL 532
Query: 167 SVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG---AAVLKMFPRLSFLNLAWT- 222
+LD+ VTD +++L +L L L ++NR LK RL+ + T
Sbjct: 533 QMLDVSCTEVTDSGTMEIEMLGELSELHLDTPGITNRSLERVGKLKKLARLNLFAASVTD 592
Query: 223 -GVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLFP 280
GV L + L+ L++ VG + AL L L LNL Q ++ ++
Sbjct: 593 EGVEALKRLDKLQDLDIC-SGGVGHR-----GVKALSQLKRLRSLNLSQNKEIRSQSVVH 646
Query: 281 LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS 324
L +L L+L N +T LH L +L +L +LS+ VL +S
Sbjct: 647 LEALTKLRFLNLSNTGITSSCLHNLFALKELESLSVYGVVLESS 690
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 93/203 (45%), Gaps = 18/203 (8%)
Query: 87 GAFRYLRSLN------VADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
G F ++ LN VA+ S + + L+ LD+S C +VTD+G + +
Sbjct: 496 GCFSFVSHLNSLVRLCVAETALTDESLIMLCKSLEKLQMLDVS-CTEVTDSGTMEIEMLG 554
Query: 141 TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 200
L +L L G+T + + L+ L+ L+L VTD + +L+ L KL+ LD+ V
Sbjct: 555 ELSELHLDTPGITNRSLERVGKLKKLARLNLFAASVTDEGVEALKRLDKLQDLDICSGGV 614
Query: 201 SNRGAAVLKMFPRLSFLNLAWT------GVTKLPNISSLECLNLSFIQQVGAETDLVLSL 254
+RG L RL LNL+ V L ++ L LNLS G + + +L
Sbjct: 615 GHRGVKALSQLKRLRSLNLSQNKEIRSQSVVHLEALTKLRFLNLS---NTGITSSCLHNL 671
Query: 255 TALQNLNHLERLN--LEQTQVSD 275
AL+ L L LE +Q+ +
Sbjct: 672 FALKELESLSVYGVVLESSQIDE 694
>gi|226534362|gb|ACO71457.1| AT4G23840-like protein [Capsella grandiflora]
Length = 90
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 41/53 (77%)
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLS 239
LTKLEYLD+WGS V+N GA + F LS+LNL+WT VT+ PNI LECL+++
Sbjct: 2 LTKLEYLDIWGSNVTNLGAICILKFSNLSYLNLSWTSVTQTPNIPHLECLHMN 54
>gi|46445968|ref|YP_007333.1| hypothetical protein pc0334 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46399609|emb|CAF23058.1| hypothetical protein pc0334 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 616
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 85/257 (33%), Positives = 121/257 (47%), Gaps = 31/257 (12%)
Query: 83 MAYLGAFRYLRSLNVA-DCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIST 141
+A+L LR LN++ D +T + L LT + L+ L+L C K+TD G+ HL S+
Sbjct: 336 LAHLAPLVNLRHLNLSGDMSNLTDAGLAHLTPLVNLQHLNLHWCDKLTDDGLAHLRSLVN 395
Query: 142 LEKLWLSETG-LTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDL-WGS 198
L+ L L LT G+A L L NL L+L P +TD L L L L++LDL W
Sbjct: 396 LQHLNLHCCNKLTDAGLAHLRPLVNLQHLNLSKCPKLTDAGLAHLTPLVNLQHLDLSWCP 455
Query: 199 QVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDL-VLSLTAL 257
LN G+ L + L+ LNL ++ TD+ ++ LT L
Sbjct: 456 ------------------LNFTGAGLAYLAPLIDLQYLNLCCCNEL---TDIGLMHLTPL 494
Query: 258 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTN--L 314
NL HL+ + ++DA L L++ L HL+LR +LT L L+SL L L
Sbjct: 495 VNLQHLDLSGCD--NLTDAGLMHLTSLVNLQHLNLRCCDNLTKTGLMHLTSLVNLRQLVL 552
Query: 315 SIRDAVLTNSGLGSFKP 331
S L +GL P
Sbjct: 553 SWYSPDLNEAGLAHLIP 569
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 95/185 (51%), Gaps = 10/185 (5%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N + + L + + + +A+L + L+ LN+ C ++T + L L + L+ L+LS+C
Sbjct: 370 NLQHLNLHWCDKLTDDGLAHLRSLVNLQHLNLHCCNKLTDAGLAHLRPLVNLQHLNLSKC 429
Query: 126 VKVTDAGMKHLLSISTLEKLWLS--ETGLTADGIALLSSLQNLSVLDLGGL-PVTDLVLR 182
K+TDAG+ HL + L+ L LS T G+A L+ L +L L+L +TD+ L
Sbjct: 430 PKLTDAGLAHLTPLVNLQHLDLSWCPLNFTGAGLAYLAPLIDLQYLNLCCCNELTDIGLM 489
Query: 183 SLQVLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFL------NLAWTGVTKLPNISSLEC 235
L L L++LDL G +++ G L L L NL TG+ L ++ +L
Sbjct: 490 HLTPLVNLQHLDLSGCDNLTDAGLMHLTSLVNLQHLNLRCCDNLTKTGLMHLTSLVNLRQ 549
Query: 236 LNLSF 240
L LS+
Sbjct: 550 LVLSW 554
>gi|325109499|ref|YP_004270567.1| hypothetical protein Plabr_2946 [Planctomyces brasiliensis DSM
5305]
gi|324969767|gb|ADY60545.1| leucine-rich repeat cysteine-containing subtype [Planctomyces
brasiliensis DSM 5305]
Length = 381
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 129/271 (47%), Gaps = 17/271 (6%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
V E + L LRSL + + AL A+ + L+ LDL C V++AG+ HL+
Sbjct: 86 VSPEALEALAKLPKLRSLLLRESN-AGDDALIAVGKCSQLENLDLREC-PVSNAGLAHLV 143
Query: 138 SISTLEKLWLS-ETGLTA---DGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
+ L+ L LS ++G T G+ ++ L L VL L L ++ L+ L+ LT L L
Sbjct: 144 GLEKLKALRLSGQSGATTVDDGGMESVAKLPQLKVLALDFLWISGDGLQQLKPLTDLREL 203
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFL------NLAWTGVTKLPNISSLECLNLSFIQQVGAE 247
L + V + L FP L L L+ G+ ++ +S LE L++S + +
Sbjct: 204 YLASTLVGDEDLKALSQFPELRKLRVSKLSQLSGQGIQEISQLSKLEELDVSEDSSLSND 263
Query: 248 TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 307
+++L L L +LNL + +SDA + L+ +L L+L N L+D L L
Sbjct: 264 -----DISSLSKLTKLTKLNLWRVPISDAGVEHLAPLTKLTWLNLDNTQLSDAGLSTLKE 318
Query: 308 LSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 338
+ +L L + ++N+GL +SL L
Sbjct: 319 MKELKFLHLGSTQISNAGLPQLSELKSLDKL 349
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 75/149 (50%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
V E + L F LR L V+ +++ + ++ ++ L+ELD+S +++ + L
Sbjct: 210 VGDEDLKALSQFPELRKLRVSKLSQLSGQGIQEISQLSKLEELDVSEDSSLSNDDISSLS 269
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
++ L KL L ++ G+ L+ L L+ L+L ++D L +L+ + +L++L L
Sbjct: 270 KLTKLTKLNLWRVPISDAGVEHLAPLTKLTWLNLDNTQLSDAGLSTLKEMKELKFLHLGS 329
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWTGVTK 226
+Q+SN G L L L + T V +
Sbjct: 330 TQISNAGLPQLSELKSLDKLVVTRTAVNQ 358
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 109/244 (44%), Gaps = 31/244 (12%)
Query: 127 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 186
+V+ ++ L + L L L E+ D + + L LDL PV++ L L
Sbjct: 85 EVSPEALEALAKLPKLRSLLLRESNAGDDALIAVGKCSQLENLDLRECPVSNAGLAHLVG 144
Query: 187 LTKLEYLDLWG----SQVSNRGAAVLKMFPR-----LSFLNLAWTGVTKLPNISSLECLN 237
L KL+ L L G + V + G + P+ L FL ++ G+ +L ++ L L
Sbjct: 145 LEKLKALRLSGQSGATTVDDGGMESVAKLPQLKVLALDFLWISGDGLQQLKPLTDLRELY 204
Query: 238 LSFIQQVGAETDLVLS--------------------LTALQNLNHLERLNL-EQTQVSDA 276
L+ VG E LS + + L+ LE L++ E + +S+
Sbjct: 205 LAST-LVGDEDLKALSQFPELRKLRVSKLSQLSGQGIQEISQLSKLEELDVSEDSSLSND 263
Query: 277 TLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLK 336
+ LS +L L+L ++D + L+ L+KLT L++ + L+++GL + K + LK
Sbjct: 264 DISSLSKLTKLTKLNLWRVPISDAGVEHLAPLTKLTWLNLDNTQLSDAGLSTLKEMKELK 323
Query: 337 LLDL 340
L L
Sbjct: 324 FLHL 327
>gi|329905907|ref|ZP_08274287.1| hypothetical protein IMCC9480_2692 [Oxalobacteraceae bacterium
IMCC9480]
gi|327547418|gb|EGF32242.1| hypothetical protein IMCC9480_2692 [Oxalobacteraceae bacterium
IMCC9480]
Length = 552
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 142/281 (50%), Gaps = 22/281 (7%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
R+L +LN+++ ++T + L +L +T LK+LDL C + D G+ HL ++++L +L +
Sbjct: 35 IRHLTNLNLSNNSKLTDAGLASLAPLTALKQLDLGHCTGIGDTGLAHLGNMASLTQLNVR 94
Query: 149 E-TGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWG-SQVSNRGA 205
+ T +T G+ L++L L+ L+L G +T + L+ L L YLDL G S +SN
Sbjct: 95 QCTNITDAGLEQLANLPRLARLNLAGCHRITAAGIAHLKKL-PLTYLDLSGCSGISNAAI 153
Query: 206 AVLKMFPRLSFLNLAWT------GVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQN 259
A LK +L+ LNL+ G L + L+ L+LS T S N
Sbjct: 154 AHLKAH-QLTELNLSDCTGFGDEGFAHLAEV-PLQTLDLSGC------TGFTNSGLRFLN 205
Query: 260 LNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSI- 316
+ L RL+L TQ+ F L + L HL L L + +L L L L +L +
Sbjct: 206 KSTLTRLSLRNCTQLDFGATFRLYGAQSLRHLDLAGCEGLDNTALTALQDL-PLEHLDLA 264
Query: 317 RDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKM 357
R+ L ++GL S SL+ L+L GG +T+ A+ ++
Sbjct: 265 RNTFLNDTGLESLAEMTSLRYLNLSGGADMTDAALAHLAEL 305
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 149/319 (46%), Gaps = 40/319 (12%)
Query: 55 IFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGM 114
I L V +H + L + + +A L L+ L++ C + + L L M
Sbjct: 27 IAVGLSAVIRHLTN-LNLSNNSKLTDAGLASLAPLTALKQLDLGHCTGIGDTGLAHLGNM 85
Query: 115 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLGG 173
L +L++ +C +TDAG++ L ++ L +L L+ +TA GIA L L L+ LDL G
Sbjct: 86 ASLTQLNVRQCTNITDAGLEQLANLPRLARLNLAGCHRITAAGIAHLKKLP-LTYLDLSG 144
Query: 174 LP-VTDLVLRSLQV--LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL-AWTGVTK--- 226
+++ + L+ LT+L D G + G A L P L L+L TG T
Sbjct: 145 CSGISNAAIAHLKAHQLTELNLSDCTG--FGDEGFAHLAEVP-LQTLDLSGCTGFTNSGL 201
Query: 227 -------LPNISSLECLNLSF---IQQVGAET----DLV-------LSLTALQNLNHLER 265
L +S C L F + GA++ DL +LTALQ+L LE
Sbjct: 202 RFLNKSTLTRLSLRNCTQLDFGATFRLYGAQSLRHLDLAGCEGLDNTALTALQDL-PLEH 260
Query: 266 LNLEQ-TQVSDATLFPLSTFKELIHLSLR-NASLTDVSLHQLSSLSKLTNLSIRDA-VLT 322
L+L + T ++D L L+ L +L+L A +TD +L L+ L L +L + + T
Sbjct: 261 LDLARNTFLNDTGLESLAEMTSLRYLNLSGGADMTDAALAHLAELPALQHLILNNCRRTT 320
Query: 323 NSGLG--SFKPPRSLKLLD 339
++GL S P +L+L+D
Sbjct: 321 DAGLAQLSHLPLETLELVD 339
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 132/307 (42%), Gaps = 49/307 (15%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHL------ 136
+A+LG L LNV C +T + L L + L L+L+ C ++T AG+ HL
Sbjct: 79 LAHLGNMASLTQLNVRQCTNITDAGLEQLANLPRLARLNLAGCHRITAAGIAHLKKLPLT 138
Query: 137 ------------LSISTLEKLWLSE------TGLTADGIALLSSLQNLSVLDLGGLP-VT 177
+I+ L+ L+E TG +G A L+ + L LDL G T
Sbjct: 139 YLDLSGCSGISNAAIAHLKAHQLTELNLSDCTGFGDEGFAHLAEVP-LQTLDLSGCTGFT 197
Query: 178 DLVLRSLQ--VLTKLEYLDL----WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNIS 231
+ LR L LT+L + +G+ GA L+ L T +T L ++
Sbjct: 198 NSGLRFLNKSTLTRLSLRNCTQLDFGATFRLYGAQSLRHLDLAGCEGLDNTALTALQDL- 256
Query: 232 SLECLNL---SFIQQVGAETDLVLSLTALQNLNHLERLNLE-QTQVSDATLFPLSTFKEL 287
LE L+L +F+ G E+ L + L LNL ++DA L L+ L
Sbjct: 257 PLEHLDLARNTFLNDTGLES--------LAEMTSLRYLNLSGGADMTDAALAHLAELPAL 308
Query: 288 IHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSF-KPPRSLKLLDLHGGW 344
HL L N TD L QLS L L L + D V LTN+ L +L+ LDL G
Sbjct: 309 QHLILNNCRRTTDAGLAQLSHL-PLETLELVDCVALTNTALARLPGAAATLQKLDLSGCT 367
Query: 345 LLTEDAI 351
L++ +
Sbjct: 368 ALSDAGL 374
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 126/280 (45%), Gaps = 27/280 (9%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N E +A + + RYL N++ +T +AL L + L+ L L+ C + TDAG+
Sbjct: 270 NDTGLESLAEMTSLRYL---NLSGGADMTDAALAHLAELPALQHLILNNCRRTTDAGLAQ 326
Query: 136 L--LSISTLEKLWLSETGLTADGIALL-SSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLE 191
L L + TLE + LT +A L + L LDL G ++D L L +T L
Sbjct: 327 LSHLPLETLE--LVDCVALTNTALARLPGAAATLQKLDLSGCTALSDAGLAHLADITTLR 384
Query: 192 YLDL-WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDL 250
LDL W ++ GA L+ P W G+T +++L + L + +G +
Sbjct: 385 KLDLSWNRNFTDAGAVALRELPLGQLRLNGWIGLTD-QGMTALSGMPLQSLGLIGCDN-- 441
Query: 251 VLSLTALQNLNH--LERLNLEQTQV--SDATLF----PLSTFKELIHLSLRNASLTDVSL 302
+ + L LN L++ +L ++ DA ++ PL ++ +A L ++
Sbjct: 442 -IDGSGLAQLNSRCLQKFDLSHCRLLNDDAMIYLRRLPLKELDLSWCGAITDAGLAHLTG 500
Query: 303 HQLSSLSKLTNLSIRDAVLTN-SGLGSFKPPRSLKLLDLH 341
QL+ L N + D L N SG+ P + L++L H
Sbjct: 501 LQLTRLDLTYNSGVTDEGLKNLSGM----PLQQLRVLGCH 536
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 62/105 (59%), Gaps = 6/105 (5%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+++ L G +++D +A L + R L+ +++ CR + A+ L + LKELDLS C
Sbjct: 432 QSLGLIGCDNIDGSGLAQLNS-RCLQKFDLSHCRLLNDDAMIYLRRLP-LKELDLSWCGA 489
Query: 128 VTDAGMKHLLSISTLEKLWLS-ETGLTADGIALLSS--LQNLSVL 169
+TDAG+ HL + L +L L+ +G+T +G+ LS LQ L VL
Sbjct: 490 ITDAGLAHLTGLQ-LTRLDLTYNSGVTDEGLKNLSGMPLQQLRVL 533
>gi|46445969|ref|YP_007334.1| hypothetical protein pc0335 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46399610|emb|CAF23059.1| hypothetical protein pc0335 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 642
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 98/301 (32%), Positives = 145/301 (48%), Gaps = 25/301 (8%)
Query: 56 FPSLLEVFKHNAEAIEL-RGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGM 114
F +L F + EA+ + + DA+ + L + L+ L + C T + L LT +
Sbjct: 295 FEKILNHFSNEIEALNFSKNAHLTDAQLLT-LKNCKNLKVLQLQACHNFTDAGLAHLTPL 353
Query: 115 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGG 173
L+ L+LS C +TDAG+ HL + L+ L LS LT G+A L+ L L+ L+L
Sbjct: 354 MALQHLNLSYCKNLTDAGLAHLAPLVVLQHLNLSSCHNLTDAGLAHLTPLVALTHLNLSW 413
Query: 174 L-PVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFL------NLAWTGVT 225
+TD L L L L +LDL +++NRG A L + L +L NL G+
Sbjct: 414 CNKLTDAGLAHLTPLVALTHLDLRECDKLTNRGLAHLALLLTLQYLDLNYCRNLTDAGLA 473
Query: 226 KLPNISSLECLNLSFIQQVGAETDLVLS-LTALQNLNHLER---LNLEQTQVSDATLFPL 281
L ++ +L+ L L + TD L+ L L L HL+ N ++DA L L
Sbjct: 474 HLSSLVALQHLKLCCCVSL---TDAGLAHLAPLVALTHLDLSWCFN-----ITDAGLAHL 525
Query: 282 STFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSI-RDAVLTNSGLGSFKPPRSLKLLD 339
+ L HL L LTDV L L+ L L +L + R LT++GL P +L+ LD
Sbjct: 526 TPLVTLQHLGLSGCRRLTDVGLAHLTRLVALQHLGLNRCDNLTDAGLAHLTPLINLQHLD 585
Query: 340 L 340
L
Sbjct: 586 L 586
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 134/306 (43%), Gaps = 55/306 (17%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N + ++L+ ++ +A+L L+ LN++ C+ +T + L L + L+ L+LS C
Sbjct: 330 NLKVLQLQACHNFTDAGLAHLTPLMALQHLNLSYCKNLTDAGLAHLAPLVVLQHLNLSSC 389
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLGGLP--------- 175
+TDAG+ HL + L L LS LT G+A L+ L L+ LDL
Sbjct: 390 HNLTDAGLAHLTPLVALTHLNLSWCNKLTDAGLAHLTPLVALTHLDLRECDKLTNRGLAH 449
Query: 176 -----------------VTDLVLRSLQVLTKLEYLDLWGS-QVSNRGAAVLKMFPRLSFL 217
+TD L L L L++L L +++ G A L L+ L
Sbjct: 450 LALLLTLQYLDLNYCRNLTDAGLAHLSSLVALQHLKLCCCVSLTDAGLAHLAPLVALTHL 509
Query: 218 NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLS-LTALQNLNHLERLNLEQTQVSDA 276
+L+W C N+ TD L+ LT L L HL +++D
Sbjct: 510 DLSW-------------CFNI---------TDAGLAHLTPLVTLQHLGLSGCR--RLTDV 545
Query: 277 TLFPLSTFKELIHLSL-RNASLTDVSLHQLSSLSKLTNLSIRDA-VLTNSGLGSFKPPRS 334
L L+ L HL L R +LTD L L+ L L +L + + LTN+GL P +
Sbjct: 546 GLAHLTRLVALQHLGLNRCDNLTDAGLAHLTPLINLQHLDLSECRKLTNAGLAHLTPLVA 605
Query: 335 LKLLDL 340
L+ LDL
Sbjct: 606 LQRLDL 611
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 73 RGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAG 132
R +N DA +A+L L+ L++++CR++T++ L LT + L+ LDL C K+T A
Sbjct: 563 RCDNLTDA-GLAHLTPLINLQHLDLSECRKLTNAGLAHLTPLVALQRLDLRCCNKLTGAR 621
Query: 133 MKHL 136
+ H
Sbjct: 622 LAHF 625
>gi|449132603|ref|ZP_21768618.1| leucine-rich repeat domain protein [Rhodopirellula europaea 6C]
gi|448888282|gb|EMB18604.1| leucine-rich repeat domain protein [Rhodopirellula europaea 6C]
Length = 455
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 111/238 (46%), Gaps = 17/238 (7%)
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
+ DAGM++L S++ LE+L LS+T +T I + L VL L VTD L L L
Sbjct: 120 IDDAGMENLTSLTKLERLILSDTAITDRTIETAGKMNTLEVLFLRRTGVTDEGLELLTGL 179
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK--------LPNISSLECLNLS 239
+KL +DL + + + G L L+ + L + VT LP L+ +N +
Sbjct: 180 SKLRAIDLRNTNIGDAGMDPLAKIKTLADVQLEKSKVTDEGLVKLAPLP----LKYINFN 235
Query: 240 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 299
+ + T +L T LERL + ++++DA++ L +L HL +R +T
Sbjct: 236 YCTTINGPTMKMLGQTP-----TLERLQGDYSKINDASMAELKGLSKLTHLRIRGCDVTG 290
Query: 300 VSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKM 357
+ +++ L +RD+ + + GL ++ +D+ L + + I Q K+
Sbjct: 291 EGIKHIANNKALAKFELRDSSVDDKGLEVISQLPAVTHVDISECRLASPEGIAQLGKL 348
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 132/310 (42%), Gaps = 52/310 (16%)
Query: 92 LRSLNVADCRR--VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ +L V RR VT L LTG++ L+ +DL R + DAGM L I TL + L +
Sbjct: 155 MNTLEVLFLRRTGVTDEGLELLTGLSKLRAIDL-RNTNIGDAGMDPLAKIKTLADVQLEK 213
Query: 150 TGLTADGIALL-------------SSLQNLSVLDLGGLP-----------VTDLVLRSLQ 185
+ +T +G+ L +++ ++ LG P + D + L+
Sbjct: 214 SKVTDEGLVKLAPLPLKYINFNYCTTINGPTMKMLGQTPTLERLQGDYSKINDASMAELK 273
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVG 245
L+KL +L + G V+ G + L+ L SS++ L I Q+
Sbjct: 274 GLSKLTHLRIRGCDVTGEGIKHIANNKALAKFELRD---------SSVDDKGLEVISQLP 324
Query: 246 AETDLVLS---------LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 296
A T + +S + L L L L L +T+ +DATL L L+L++ S
Sbjct: 325 AVTHVDISECRLASPEGIAQLGKLTGLTYLGLWETKTNDATLEAFGELVNLEELNLKSTS 384
Query: 297 LTDVSLHQLSSLSKLTNLSIRDAVLTNSG---LGSFKPPRSLKLLDLHGGWLLTEDAILQ 353
+TD SL L ++KL L++ L + L +S+ + + G+ D I
Sbjct: 385 VTDQSLPVLMKMTKLKTLNVAGTQLGDDSFLELAKLPNLKSMNVANTSIGF----DVIDT 440
Query: 354 FCKMHPRIEV 363
+ HP ++V
Sbjct: 441 LAENHPDLQV 450
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 61/149 (40%), Gaps = 25/149 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL 219
LS + N + G + D + +L LTKLE L L + +++R L L L
Sbjct: 104 LSGIPNTLIATFNGPGIDDAGMENLTSLTKLERLILSDTAITDRTIETAGKMNTLEVLFL 163
Query: 220 AWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLF 279
TGVT E L L L L+ L ++L T + DA +
Sbjct: 164 RRTGVTD-------EGLEL------------------LTGLSKLRAIDLRNTNIGDAGMD 198
Query: 280 PLSTFKELIHLSLRNASLTDVSLHQLSSL 308
PL+ K L + L + +TD L +L+ L
Sbjct: 199 PLAKIKTLADVQLEKSKVTDEGLVKLAPL 227
>gi|59802548|gb|AAX07514.1| putative regulatory subunit [Gemmata sp. Wa1-1]
Length = 250
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 102/218 (46%), Gaps = 29/218 (13%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
DA+ + L + L LN+ +VT + L L+ +T L L L + KVTDAG+K L
Sbjct: 32 TDAD-LKELAPLKNLTQLNLC-LTKVTDAGLKELSPLTKLTHLCLMQ-TKVTDAGLKELA 88
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
++ L L L T +T G+ L+ L NL+VL LG VTD L+ L L L L+L
Sbjct: 89 PLTNLTTLELGSTQVTDAGLKELAPLTNLTVLTLGSTQVTDAGLKELAPLKSLTLLELGE 148
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTAL 257
+Q++ G L F +L+ L+L+ T VT G + L
Sbjct: 149 TQITEAGIKELAPFTKLTRLDLSITRVT-----------------DAGVK--------GL 183
Query: 258 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL-RN 294
L +LNL T V+D L L+ K L LSL RN
Sbjct: 184 APFTKLTQLNLGGTLVTDTCLKDLAPLKNLAFLSLSRN 221
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 97/214 (45%), Gaps = 25/214 (11%)
Query: 127 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 186
KVTDA +K L + L +L L T +T G+ LS L L+ L L VTD L+ L
Sbjct: 30 KVTDADLKELAPLKNLTQLNLCLTKVTDAGLKELSPLTKLTHLCLMQTKVTDAGLKELAP 89
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGA 246
LT L L+L +QV++ G L L+ L L T VT
Sbjct: 90 LTNLTTLELGSTQVTDAGLKELAPLTNLTVLTLGSTQVTDA------------------- 130
Query: 247 ETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLS 306
L L L L L L +TQ+++A + L+ F +L L L +TD + L+
Sbjct: 131 ------GLKELAPLKSLTLLELGETQITEAGIKELAPFTKLTRLDLSITRVTDAGVKGLA 184
Query: 307 SLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
+KLT L++ ++T++ L P ++L L L
Sbjct: 185 PFTKLTQLNLGGTLVTDTCLKDLAPLKNLAFLSL 218
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 64/130 (49%), Gaps = 7/130 (5%)
Query: 226 KLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFK 285
+L + +L LNL + A L L L L L L QT+V+DA L L+
Sbjct: 38 ELAPLKNLTQLNLCLTKVTDA------GLKELSPLTKLTHLCLMQTKVTDAGLKELAPLT 91
Query: 286 ELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 345
L L L + +TD L +L+ L+ LT L++ +T++GL P +SL LL+L G
Sbjct: 92 NLTTLELGSTQVTDAGLKELAPLTNLTVLTLGSTQVTDAGLKELAPLKSLTLLEL-GETQ 150
Query: 346 LTEDAILQFC 355
+TE I +
Sbjct: 151 ITEAGIKELA 160
>gi|46447550|ref|YP_008915.1| hypothetical protein pc1916 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401191|emb|CAF24640.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 310
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 121/281 (43%), Gaps = 55/281 (19%)
Query: 56 FPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMT 115
F ++ F E + + + + L + L++L + C+ +T L LT +T
Sbjct: 67 FERIINHFSKKIEGLNFLNQAYLTNAHLLALKDCKNLKALYLEACQALTDDGLEHLTLLT 126
Query: 116 CLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGG- 173
L+ LDLS C +TDAG+ HL + L+ L L+ LT DG+ L+ L L LDL
Sbjct: 127 ALQHLDLSGCWNLTDAGLVHLTPLVGLQHLKLNACYNLTDDGLVHLTPLTALQHLDLSDC 186
Query: 174 LPVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISS 232
+ +TD L L+ LT L++L L +++ G A L L +L L+
Sbjct: 187 MNLTDAGLAHLKPLTALQHLGLSCCENLTDAGLAHLAPLTGLQYLALS------------ 234
Query: 233 LECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL 292
+C+NL+ D L L L HL+L
Sbjct: 235 -DCMNLT-----------------------------------DDGLVHLKPLTALQHLNL 258
Query: 293 RNA-SLTDVSLHQLSSLSKLTNLSIR--DAVLTNSGLGSFK 330
RN ++TD L L+ L L L++R D V TN+GL FK
Sbjct: 259 RNCRNVTDAGLAHLTPLKALQQLNLRRCDKV-TNTGLARFK 298
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 91/182 (50%), Gaps = 15/182 (8%)
Query: 41 LADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADC 100
L D L HL +LL +H ++L G ++ + +L L+ L + C
Sbjct: 114 LTDDGLEHL--------TLLTALQH----LDLSGCWNLTDAGLVHLTPLVGLQHLKLNAC 161
Query: 101 RRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIAL 159
+T L LT +T L+ LDLS C+ +TDAG+ HL ++ L+ L LS LT G+A
Sbjct: 162 YNLTDDGLVHLTPLTALQHLDLSDCMNLTDAGLAHLKPLTALQHLGLSCCENLTDAGLAH 221
Query: 160 LSSLQNLSVLDLGG-LPVTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFL 217
L+ L L L L + +TD L L+ LT L++L+L + V++ G A L L L
Sbjct: 222 LAPLTGLQYLALSDCMNLTDDGLVHLKPLTALQHLNLRNCRNVTDAGLAHLTPLKALQQL 281
Query: 218 NL 219
NL
Sbjct: 282 NL 283
>gi|303286333|ref|XP_003062456.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455973|gb|EEH53275.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 519
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 134/326 (41%), Gaps = 46/326 (14%)
Query: 77 SVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTD-----A 131
VD + +A + + +L+S VT S + L +T L+EL RC ++ + A
Sbjct: 94 GVDDDALAAMASATHLKSFFCEGNDAVTGSGVRHLASLTSLRELSFERCARLREGMCHLA 153
Query: 132 GMKHLLSI-----------------------------STLEKLWLSETGLTADGIALLSS 162
G+++L S+ ST +L L+ TG AD L
Sbjct: 154 GLRNLRSLNLGWCGKLSAKETSRALTPFFPASASAPRSTPIELSLARTGANADTARALGQ 213
Query: 163 LQN-LSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW 221
L L L++ G + D L L L L L L +VS+ G L L LNL +
Sbjct: 214 LAGRLVALNVSGCAMNDDALHFLGGLINLRSLSLERCRVSDVGVRQLCGLRDLRELNLGY 273
Query: 222 T-----GVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDA 276
T GV L ++ L +NL + VG + + LE L + T V D
Sbjct: 274 TRVTNDGVLALAPLTELRVVNLDSLGDVGDA-----GMEVARRWEKLESLCVSDTGVGDG 328
Query: 277 TLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLK 336
+ L + L L+L ++TD L L ++ L NL++ ++T+ G+ +L
Sbjct: 329 GVRKLKSCARLRDLNLGYTNVTDDGLEHLEDMTSLRNLNLDSRLITDDGVRHLANLGALT 388
Query: 337 LLDLHGGWLLTEDAILQFCKMHPRIE 362
+DL G + E A F K P++E
Sbjct: 389 AIDLFGAKISDEGASRLF-KCTPKLE 413
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 112/234 (47%), Gaps = 3/234 (1%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L R LR LN+ RVT+ + AL +T L+ ++L V DAGM+ LE L
Sbjct: 260 LCGLRDLRELNLGY-TRVTNDGVLALAPLTELRVVNLDSLGDVGDAGMEVARRWEKLESL 318
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S+TG+ G+ L S L L+LG VTD L L+ +T L L+L +++ G
Sbjct: 319 CVSDTGVGDGGVRKLKSCARLRDLNLGYTNVTDDGLEHLEDMTSLRNLNLDSRLITDDGV 378
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL-NLSFIQQVGAETDLVLSLTALQNLNHLE 264
L L+ ++L ++ +C L ++ G V ++ ++
Sbjct: 379 RHLANLGALTAIDLFGAKISDEGASRLFKCTPKLERLELCGGSLTNVGVKRIAEHCKGMK 438
Query: 265 RLNL-EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 317
LN+ +++D + + T +EL L+L + +T + +L++L LT+L+I+
Sbjct: 439 TLNIGRNAKITDDCVDDVVTMRELTSLNLAFSKITSDGVRKLAALPCLTSLAIK 492
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 118/289 (40%), Gaps = 49/289 (16%)
Query: 95 LNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTA 154
+NV++C V AL A+ T LK VT +G++HL S+++L +L
Sbjct: 87 VNVSECAGVDDDALAAMASATHLKSFFCEGNDAVTGSGVRHLASLTSLRELSFERCARLR 146
Query: 155 DGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNR--GAAVLKMFP 212
+G+ L+ L+NL L+LG W ++S + A+ FP
Sbjct: 147 EGMCHLAGLRNLRSLNLG-----------------------WCGKLSAKETSRALTPFFP 183
Query: 213 RLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ 272
P + +E LS + + GA D +L L L LN+
Sbjct: 184 ----------ASASAPRSTPIE---LS-LARTGANADTARALGQLA--GRLVALNVSGCA 227
Query: 273 VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPP 332
++D L L L LSL ++DV + QL L L L++ +TN G+ + P
Sbjct: 228 MNDDALHFLGGLINLRSLSLERCRVSDVGVRQLCGLRDLRELNLGYTRVTNDGVLALAPL 287
Query: 333 RSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQ-IGSNG 380
L++++L DA ++ + W +L +C SD +G G
Sbjct: 288 TELRVVNLD-SLGDVGDAGMEVARR------WEKLESLCVSDTGVGDGG 329
>gi|46447283|ref|YP_008648.1| hypothetical protein pc1649 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400924|emb|CAF24373.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 521
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 118/247 (47%), Gaps = 24/247 (9%)
Query: 56 FPSLLEVFKHNAEAIELRGENS--VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTG 113
F +L F + E + EN+ DA +A L + L+ L + C +T + L L
Sbjct: 281 FEKILNYFSNEIEGLNF-SENAYLTDAHLLA-LKNCKNLKVLQLQSCHHLTDTGLACLPS 338
Query: 114 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLG 172
+T L+ L+L+ C K+TDAG+ HL + L+ L L LT+ G+ SL L L+L
Sbjct: 339 LTNLQYLNLNGCKKLTDAGLAHLTPLVNLQYLDLGFCDKLTSKGLGHFKSLIALQHLNLS 398
Query: 173 GLP-VTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW------TGV 224
G + D L L L L+YL+L + +++ G A L L L+L+W G+
Sbjct: 399 GCKFIRDNGLAHLTPLVALQYLNLSQCTFLTDAGLAHLVPLVALKHLDLSWCNSLTNAGL 458
Query: 225 TKLPNISSLECLNLS---FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPL 281
L ++ +L+ LNLS ++ + G L L L L+ LNLE + F L
Sbjct: 459 AHLVHLVALQYLNLSGCIYLSEAG--------LAHLAPLTSLQHLNLEDCEHFTNARFRL 510
Query: 282 STFKELI 288
+ FK L+
Sbjct: 511 AHFKALL 517
>gi|326679785|ref|XP_002660968.2| PREDICTED: hypothetical protein LOC100332407 [Danio rerio]
Length = 537
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 147/306 (48%), Gaps = 20/306 (6%)
Query: 33 SLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNA-EAIELRGENSVDAEWMAYLGAFRY 91
SL L LA+ LL H+ R RL+ P LE+F + L E + L AF
Sbjct: 104 SLACLTPELAELLLSHMARERLLRPRTLELFFGCPLQKFVLNCYPYTTNELLRQLRAFTC 163
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
L+ L+ + +T + L L+ ++ L+ L+LS C K+TD+ ++H+ + +L L L +T
Sbjct: 164 LKHLSFLNSPLITDAGLSVLSNLSKLQHLNLSSCSKLTDSCLQHITGLRSLTFLALDQTK 223
Query: 152 LTADGIALL--SSLQNLSVLDLGGLPVTDLVLRSLQV-LTKLEYLDLWGSQVSNRGAAVL 208
++ G+ L S L L L +T+ LR L + +L L + ++VS+ + L
Sbjct: 224 VSDAGLLLYLQSGSSALCQLSLNQTAITESTLRVLPASVPQLRMLSIKHTKVSD--VSAL 281
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL----NLSFIQQVG---AETDLVLSLTALQNLN 261
L L+L TGV + +SL+CL +LS + G A+ + L + A L
Sbjct: 282 AELKNLQTLHLDGTGVQE----NSLQCLASHPSLSALSLAGIPVADGNHTLEIIAGLRLT 337
Query: 262 HLERLNLEQTQVSDATLFPLS-TFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV 320
L + V+D+ L LS L LTD + QLSS+++L LS+ +
Sbjct: 338 QLTLPG--RHSVTDSGLSFLSRQTLLLELDLTDYTQLTDHGITQLSSMTRLKKLSLSNTQ 395
Query: 321 LTNSGL 326
+++SGL
Sbjct: 396 VSDSGL 401
>gi|87311782|ref|ZP_01093896.1| hypothetical protein DSM3645_04405 [Blastopirellula marina DSM
3645]
gi|87285456|gb|EAQ77376.1| hypothetical protein DSM3645_04405 [Blastopirellula marina DSM
3645]
Length = 427
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 127/271 (46%), Gaps = 27/271 (9%)
Query: 92 LRSLNVADCRR--VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
L+ L+V RR +++ +L ++ + L+ LDL R +TDAGM+ + + +E L L
Sbjct: 130 LKDLSVLQLRRTNISNKSLESMLQLPKLRYLDL-RYDDITDAGMEIVAKMPNMEVLRLEG 188
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
+ +G+A L+ L L L++ G VTD +S+ LT LE L+ G+ ++ G L
Sbjct: 189 AIVGDEGLAHLTGLSKLKFLNVRGTNVTDAGFKSIANLTNLETLETNGTALTTEGMEYLA 248
Query: 210 MFPRLSFLNLAWT-----GVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLN--- 261
++ L L G L + L+ L L + GA + ++ + L++L+
Sbjct: 249 PLTKVKTLELMRAQVKDDGFVHLKEMKQLQNLMLRQTRVAGAGMENLIGIDTLKSLDVSE 308
Query: 262 ---------------HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLS 306
+LE+LNL T+V+ L + + L L +TD SL L
Sbjct: 309 TPFGDDGLIHVGKFKNLEKLNLWFTKVTPDGLPHIKDLTNMKTLILDYQGITDDSLENLV 368
Query: 307 SLSKLTNLSIRDA-VLTNSGLGSFKPPRSLK 336
+ KL LS++D ++TN + K + LK
Sbjct: 369 GMQKLQTLSLKDNDMITNESIKYLKQLKGLK 399
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 100/218 (45%), Gaps = 11/218 (5%)
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
VTD + +LL + L + T ++ GI LS+L++LSVL L +++ L S+ L
Sbjct: 95 VTDKTIDNLLQMKDLRDFSAANTTISDAGIEKLSALKDLSVLQLRRTNISNKSLESMLQL 154
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSFIQ 242
KL YLDL +++ G ++ P + L L G+ L +S L+ LN+
Sbjct: 155 PKLRYLDLRYDDITDAGMEIVAKMPNMEVLRLEGAIVGDEGLAHLTGLSKLKFLNVRGTN 214
Query: 243 QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 302
A ++ NL +LE L T ++ + L+ ++ L L A + D
Sbjct: 215 VTDA------GFKSIANLTNLETLETNGTALTTEGMEYLAPLTKVKTLELMRAQVKDDGF 268
Query: 303 HQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
L + +L NL +R + +G+ + +LK LD+
Sbjct: 269 VHLKEMKQLQNLMLRQTRVAGAGMENLIGIDTLKSLDV 306
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 17/212 (8%)
Query: 70 IELRGENSVDAEW--MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ +RG N DA + +A L L + A +T+ + L +T +K L+L R +
Sbjct: 208 LNVRGTNVTDAGFKSIANLTNLETLETNGTA----LTTEGMEYLAPLTKVKTLELMRA-Q 262
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
V D G HL + L+ L L +T + G+ L + L LD+ P D L +
Sbjct: 263 VKDDGFVHLKEMKQLQNLMLRQTRVAGAGMENLIGIDTLKSLDVSETPFGDDGLIHVGKF 322
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSFIQ 242
LE L+LW ++V+ G +K + L L + G+T L + L+ L+L
Sbjct: 323 KNLEKLNLWFTKVTPDGLPHIKDLTNMKTLILDYQGITDDSLENLVGMQKLQTLSLKDND 382
Query: 243 QVGAETDLVLSLTALQNLNHLERLNLEQTQVS 274
+ E S+ L+ L L+++++ TQ+
Sbjct: 383 MITNE-----SIKYLKQLKGLKKISITFTQID 409
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 82/189 (43%), Gaps = 25/189 (13%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL 219
LS L+++ +L + G VTD + +L + L + +S+ G L LS L L
Sbjct: 79 LSKLKHVKILKVYGADVTDKTIDNLLQMKDLRDFSAANTTISDAGIEKLSALKDLSVLQL 138
Query: 220 AWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLF 279
T NIS+ SL ++ L L L+L ++DA +
Sbjct: 139 RRT------NISNK-------------------SLESMLQLPKLRYLDLRYDDITDAGME 173
Query: 280 PLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 339
++ + L L A + D L L+ LSKL L++R +T++G S +L+ L+
Sbjct: 174 IVAKMPNMEVLRLEGAIVGDEGLAHLTGLSKLKFLNVRGTNVTDAGFKSIANLTNLETLE 233
Query: 340 LHGGWLLTE 348
+G L TE
Sbjct: 234 TNGTALTTE 242
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 2/110 (1%)
Query: 254 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 313
L L L H++ L + V+D T+ L K+L S N +++D + +LS+L L+
Sbjct: 76 LEPLSKLKHVKILKVYGADVTDKTIDNLLQMKDLRDFSAANTTISDAGIEKLSALKDLSV 135
Query: 314 LSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEV 363
L +R ++N L S L+ LDL + DA ++ P +EV
Sbjct: 136 LQLRRTNISNKSLESMLQLPKLRYLDLR--YDDITDAGMEIVAKMPNMEV 183
>gi|325106627|ref|YP_004267695.1| hypothetical protein Plabr_0042 [Planctomyces brasiliensis DSM
5305]
gi|324966895|gb|ADY57673.1| leucine-rich repeat-containing protein [Planctomyces brasiliensis
DSM 5305]
Length = 526
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 78/143 (54%), Gaps = 2/143 (1%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+ Y+ AFR+L+S+++ + +++ + L L G+ L+E++L R V A +K L + L
Sbjct: 137 LRYVKAFRFLKSIDL-NQNKLSEAGLCHLEGLVSLREVNLRRS-SVNGAALKWLQRLVLL 194
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
EKL L T T G++ L+ + L L LGG + D L L +LE LDL G+ +S+
Sbjct: 195 EKLDLRNTNFTHHGLSFLTYFRRLRSLKLGGNRIEDDGLFPLLQFPRLESLDLSGTPISD 254
Query: 203 RGAAVLKMFPRLSFLNLAWTGVT 225
+ L PRL L + T V+
Sbjct: 255 QAMKTLAQLPRLKRLYVPGTAVS 277
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 130/284 (45%), Gaps = 34/284 (11%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
E ++LR N +++L FR LRSL + R+ L+ L L+ LDLS
Sbjct: 195 EKLDLRNTN-FTHHGLSFLTYFRRLRSLKLGG-NRIEDDGLFPLLQFPRLESLDLSG-TP 251
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ-- 185
++D MK L + L++L++ T ++ +G+ LL+S+ L LD+ VT ++ L+
Sbjct: 252 ISDQAMKTLAQLPRLKRLYVPGTAVSDEGLQLLTSVSTLIALDVRKTAVTPSGVQQLEQH 311
Query: 186 ---VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTG-----------------VT 225
+ K + DL S V R VL+M L L+ +G +
Sbjct: 312 SPGLKIKSDAADLPSSHVI-RSRDVLQMHG--CHLTLSRSGDVIACQAGEDASPPIHWFS 368
Query: 226 KLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFK 285
L + SSL+ L L+ + G + L L+N++ L+ L L+Q L L +
Sbjct: 369 ALESFSSLKSLELNRLALDGEQ------LQFLKNMSQLQSLALKQCTFPPEALSVLKSLN 422
Query: 286 ELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 329
L L LR+ ++D SL L L L+NL + +T +GL S
Sbjct: 423 RLAWLDLRDTPVSDESLQALGELPSLSNLCLSRTGVTATGLESL 466
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 85/196 (43%), Gaps = 17/196 (8%)
Query: 139 ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
+ +L++L LS T L G+ LS L+ L + VTD LR ++ L+ +DL +
Sbjct: 95 LRSLQELDLSGTSLDDIGMEKLSKLEQLRTFAIAKTRVTDNGLRYVKAFRFLKSIDLNQN 154
Query: 199 QVSNRGAAVLKMFPRLSFLNLAWTGVT--------KLPNISSLECLNLSFIQQVGAETDL 250
++S G L+ L +NL + V +L + L+ N +F
Sbjct: 155 KLSEAGLCHLEGLVSLREVNLRRSSVNGAALKWLQRLVLLEKLDLRNTNFTHH------- 207
Query: 251 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 310
L+ L L L L ++ D LFPL F L L L ++D ++ L+ L +
Sbjct: 208 --GLSFLTYFRRLRSLKLGGNRIEDDGLFPLLQFPRLESLDLSGTPISDQAMKTLAQLPR 265
Query: 311 LTNLSIRDAVLTNSGL 326
L L + +++ GL
Sbjct: 266 LKRLYVPGTAVSDEGL 281
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 64/132 (48%), Gaps = 3/132 (2%)
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
L S S+L+ L L+ L + + L ++ L L L L L+ L +L +LDL
Sbjct: 370 LESFSSLKSLELNRLALDGEQLQFLKNMSQLQSLALKQCTFPPEALSVLKSLNRLAWLDL 429
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK--LPNISSLECLNLSFIQQVGAETD-LVL 252
+ VS+ L P LS L L+ TGVT L ++SS L I++ G D VL
Sbjct: 430 RDTPVSDESLQALGELPSLSNLCLSRTGVTATGLESLSSAPLLRDLVIKECGQIGDPAVL 489
Query: 253 SLTALQNLNHLE 264
+L +NL HL+
Sbjct: 490 ALEKFKNLKHLD 501
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 95/229 (41%), Gaps = 32/229 (13%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSIS---TLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 173
L+ELDL+ C G K L TL KL + D + L+ L++L LDL G
Sbjct: 50 LQELDLTNC----PCGSKILAQPEFQETLLKLKCQNCDIDFDTLELIGQLRSLQELDLSG 105
Query: 174 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 233
+ D+ + L L +L + ++V++ G +K F L ++L
Sbjct: 106 TSLDDIGMEKLSKLEQLRTFAIAKTRVTDNGLRYVKAFRFLKSIDL-------------- 151
Query: 234 ECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 293
N + + + G L L+ L L +NL ++ V+ A L L L L LR
Sbjct: 152 ---NQNKLSEAG--------LCHLEGLVSLREVNLRRSSVNGAALKWLQRLVLLEKLDLR 200
Query: 294 NASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 342
N + T L L+ +L +L + + + GL L+ LDL G
Sbjct: 201 NTNFTHHGLSFLTYFRRLRSLKLGGNRIEDDGLFPLLQFPRLESLDLSG 249
>gi|46447466|ref|YP_008831.1| hypothetical protein pc1832 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401107|emb|CAF24556.1| hypothetical protein pc1832 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 456
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 117/247 (47%), Gaps = 14/247 (5%)
Query: 56 FPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMT 115
F +L+ F + EA+ + + L + L+ L++ +C T + L LT +T
Sbjct: 214 FEEILKYFSNEIEALNFSNNADLTDAHLLALKNCKNLKVLDLQECWNFTDAGLAHLTPLT 273
Query: 116 CLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL- 174
L+ LDL+ C +VTD G+ HL + L+ L L LT G+ L L L LDL
Sbjct: 274 ALQHLDLTGCFRVTDTGLAHLSPLVALQHLNLIGCDLTDAGLVHLKPLIALKHLDLMRCW 333
Query: 175 PVTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFLNL--AW----TGVTKL 227
+TD L L+ L L++L+L + +++ G A L L L+L W G+ +L
Sbjct: 334 NLTDAGLAHLRPLVALQHLNLTNCENITDVGLAHLTPLVALKHLDLMQCWKLTGNGLARL 393
Query: 228 PNISSLECLNLSFIQQVGAETDLVLS-LTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 286
++ +L+ LNLS + TD L+ L L L HL+ N +++DA L
Sbjct: 394 RSLVALQHLNLSGCSYL---TDAGLAHLRPLVALQHLDLANC--YELTDAGLAHFKFLAA 448
Query: 287 LIHLSLR 293
HL LR
Sbjct: 449 TTHLDLR 455
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 116/266 (43%), Gaps = 50/266 (18%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
+ +LN ++ +T + L AL LK LDL C TDAG+ HL ++ L+ L L+
Sbjct: 225 IEALNFSNNADLTDAHLLALKNCKNLKVLDLQECWNFTDAGLAHLTPLTALQHLDLTGCF 284
Query: 152 LTAD-GIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKM 210
D G+A LS L L L+L G +TD L L+ L L++LDL
Sbjct: 285 RVTDTGLAHLSPLVALQHLNLIGCDLTDAGLVHLKPLIALKHLDL--------------- 329
Query: 211 FPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 270
+ NL G+ L + +L+ LNL+ + +
Sbjct: 330 ---MRCWNLTDAGLAHLRPLVALQHLNLTNCENI-------------------------- 360
Query: 271 TQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRD-AVLTNSGLGS 328
T V A L PL K HL L LT L +L SL L +L++ + LT++GL
Sbjct: 361 TDVGLAHLTPLVALK---HLDLMQCWKLTGNGLARLRSLVALQHLNLSGCSYLTDAGLAH 417
Query: 329 FKPPRSLKLLDLHGGWLLTEDAILQF 354
+P +L+ LDL + LT+ + F
Sbjct: 418 LRPLVALQHLDLANCYELTDAGLAHF 443
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 59/114 (51%), Gaps = 5/114 (4%)
Query: 254 LTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKL 311
L AL+N +L+ L+L++ +DA L L+ L HL L +TD L LS L L
Sbjct: 241 LLALKNCKNLKVLDLQECWNFTDAGLAHLTPLTALQHLDLTGCFRVTDTGLAHLSPLVAL 300
Query: 312 TNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWH 365
+L++ LT++GL KP +LK LDL W LT+ + + P + + H
Sbjct: 301 QHLNLIGCDLTDAGLVHLKPLIALKHLDLMRCWNLTDAGL---AHLRPLVALQH 351
>gi|406833864|ref|ZP_11093458.1| hypothetical protein SpalD1_19557 [Schlesneria paludicola DSM
18645]
Length = 310
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 103/169 (60%), Gaps = 8/169 (4%)
Query: 79 DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLS 138
DAE + + + LRS+NV +VT L L M L+ L LS K+TDAG++HLL
Sbjct: 123 DAE-LKLMAGLKSLRSINVV-LSQVTDDGLKELESMDRLESLALS-STKITDAGLRHLLR 179
Query: 139 ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
+ L +L L++T ++ +G+ +SSL +LS+LDL G +TD L+SL++L KLEYLDL G+
Sbjct: 180 LKKLSRLQLAQTAVSDEGLKTISSLHSLSLLDLYGTRITDQGLKSLELLRKLEYLDLGGT 239
Query: 199 QVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSFIQ 242
+SN G A L + P L + + T G+ +L +ISSL L L+ Q
Sbjct: 240 AISNAGLAHLGVLPNLVTVGVRGTQIGDSGLEQLTSISSLRYLYLNMAQ 288
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%)
Query: 127 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 186
++TD G+K L + LE L L T ++ G+A L L NL + + G + D L L
Sbjct: 216 RITDQGLKSLELLRKLEYLDLGGTAISNAGLAHLGVLPNLVTVGVRGTQIGDSGLEQLTS 275
Query: 187 LTKLEYLDLWGSQVSNRGAA 206
++ L YL L +Q + G A
Sbjct: 276 ISSLRYLYLNMAQTTKEGRA 295
>gi|406835014|ref|ZP_11094608.1| hypothetical protein SpalD1_25335 [Schlesneria paludicola DSM
18645]
Length = 497
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 109/220 (49%), Gaps = 6/220 (2%)
Query: 124 RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRS 183
+ ++T A + L + L L T ++ +GI L L+NL+ L L VTD LR+
Sbjct: 111 KSSQITSARLSDLSGLKNLTSLHFENTEISNEGIHELQELKNLTTLSLHTTHVTDAGLRN 170
Query: 184 LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV--TKLPNISSLECLNLSFI 241
L+ ++KL L L G+ +S+ G L LS L+L + +L IS LE L +
Sbjct: 171 LREVSKLTTLSLSGNSISDDGFKELGELKHLSSLSLRLENIDDVQLDEISKLENLK-TLS 229
Query: 242 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 301
V + TD L L+ + +L +L L ++++DA L PL K L L L + +TD
Sbjct: 230 LHVPSITD--SELKQLRTVKNLTKLFLINSKITDAGLKPLLDLKNLTDLDLSSTQITDAG 287
Query: 302 LHQLSSLSKLTNLSIRD-AVLTNSGLGSFKPPRSLKLLDL 340
L ++ L LT+L + +T+ G + ++LK L L
Sbjct: 288 LKEIGQLENLTSLYLEGCGGITDVGFRELRNIKNLKRLAL 327
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 104/230 (45%), Gaps = 25/230 (10%)
Query: 102 RVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLS 161
++T + L + + L L L C +TD G + L +I L++L L+ G+T G+ L
Sbjct: 282 QITDAGLKEIGQLENLTSLYLEGCGGITDVGFRELRNIKNLKRLALARCGITDLGMKGLG 341
Query: 162 SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW 221
L++L +LDL P+TD ++ + LT L L L GS ++ +L
Sbjct: 342 QLKSLELLDLSRTPITDHGIQEIGGLTNLSTLWLLGSNIT----------------DLGL 385
Query: 222 TGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPL 281
+ L N+ L L +FI G + L N+N L + + ++DA L L
Sbjct: 386 REINGLENLKEL-YLKSAFITDAGMK-----ELGKFHNMNMLHLIQCD--GITDAGLKEL 437
Query: 282 STFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 330
K+L L ++TD + +L +LT L++ +T SG+ K
Sbjct: 438 RDLKKLSMFELYGCRNVTDAGIDELKEHKQLTILNVGATQVTVSGVNKLK 487
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 124/276 (44%), Gaps = 41/276 (14%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
NS+ + LG ++L SL++ + L ++ + LK L L +TD+ +K
Sbjct: 185 NSISDDGFKELGELKHLSSLSLR-LENIDDVQLDEISKLENLKTLSL-HVPSITDSELKQ 242
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
L ++ L KL+L + +T G+ L L+NL TDL DL
Sbjct: 243 LRTVKNLTKLFLINSKITDAGLKPLLDLKNL----------TDL--------------DL 278
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSFIQQVGAETD 249
+Q+++ G + L+ L L G +L NI +L+ L L+ + G TD
Sbjct: 279 SSTQITDAGLKEIGQLENLTSLYLEGCGGITDVGFRELRNIKNLKRLALA---RCGI-TD 334
Query: 250 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 309
L + L L LE L+L +T ++D + + L L L +++TD+ L +++ L
Sbjct: 335 --LGMKGLGQLKSLELLDLSRTPITDHGIQEIGGLTNLSTLWLLGSNITDLGLREINGLE 392
Query: 310 KLTNLSIRDAVLTNSG---LGSFKPPRSLKLLDLHG 342
L L ++ A +T++G LG F L L+ G
Sbjct: 393 NLKELYLKSAFITDAGMKELGKFHNMNMLHLIQCDG 428
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%)
Query: 267 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 326
N + +Q++ A L LS K L L N +++ +H+L L LT LS+ +T++GL
Sbjct: 109 NFKSSQITSARLSDLSGLKNLTSLHFENTEISNEGIHELQELKNLTTLSLHTTHVTDAGL 168
Query: 327 GSFKPPRSLKLLDLHG 342
+ + L L L G
Sbjct: 169 RNLREVSKLTTLSLSG 184
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N + + L+ DA M LG F + L++ C +T + L L + L +L C
Sbjct: 393 NLKELYLKSAFITDA-GMKELGKFHNMNMLHLIQCDGITDAGLKELRDLKKLSMFELYGC 451
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSL 163
VTDAG+ L L L + T +T G+ L L
Sbjct: 452 RNVTDAGIDELKEHKQLTILNVGATQVTVSGVNKLKEL 489
>gi|406830031|ref|ZP_11089625.1| leucine-rich repeat-containing protein [Schlesneria paludicola DSM
18645]
Length = 306
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 121/262 (46%), Gaps = 23/262 (8%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
D + LGA ++ SL+ +T A LT L L L+ + DA M +
Sbjct: 39 ADGKASGSLGADGHVVSLS---SHSMTDDAAKQLTAFPALTTLALTDS-PIGDAHMGVIG 94
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
+++ LE L L T +T G+ +SSL++L L+L G VTD L SL LT+L L+L
Sbjct: 95 ALTQLESLALDHTQVTDAGLQSISSLEHLRELNLAGCSVTDGGLGSLAGLTELTSLNLND 154
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWTGVT--KLPNISSLECLNLSFIQQVGAETDLVLSLT 255
+Q++ G L RL L L T V +P +S LE L + + +V ++T
Sbjct: 155 TQINGLGLVYLSKLNRLEALYLQNTVVDFESIPPLSGLESLKILHLAGTKTGGGIVRAIT 214
Query: 256 ALQNLNHLERLNLEQTQVSDATLFPLST--------FKELIHLSLRNASLTDVSL---HQ 304
L + LERL L T + D + L+ FK L + +L+D +L H
Sbjct: 215 GLPS---LERLYLNGTSIKDEDIPALAAVLAQNCPHFKGLF---VEKTALSDAALEPMHP 268
Query: 305 LSSLSKLTNLSIRDAVLTNSGL 326
L+ L + T + + +T G+
Sbjct: 269 LADLKEFTLIHVHGTKVTKDGV 290
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 15/150 (10%)
Query: 200 VSNRGAAVLKMFPRLSFLNL-------AWTGVTKLPNISSLECLNLSFIQQVGAETDLVL 252
+++ A L FP L+ L L A GV + ++ LE L L Q A
Sbjct: 61 MTDDAAKQLTAFPALTTLALTDSPIGDAHMGV--IGALTQLESLALDHTQVTDA------ 112
Query: 253 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 312
L ++ +L HL LNL V+D L L+ EL L+L + + + L LS L++L
Sbjct: 113 GLQSISSLEHLRELNLAGCSVTDGGLGSLAGLTELTSLNLNDTQINGLGLVYLSKLNRLE 172
Query: 313 NLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 342
L +++ V+ + SLK+L L G
Sbjct: 173 ALYLQNTVVDFESIPPLSGLESLKILHLAG 202
>gi|87309359|ref|ZP_01091495.1| hypothetical protein DSM3645_22189 [Blastopirellula marina DSM
3645]
gi|87287998|gb|EAQ79896.1| hypothetical protein DSM3645_22189 [Blastopirellula marina DSM
3645]
Length = 351
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 116/260 (44%), Gaps = 25/260 (9%)
Query: 120 LDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDL 179
+DLSR V TD + L TL KL L + G+T + + L+ L L LD+ G+ +T
Sbjct: 55 MDLSRVV-ATDVDFRGLGEAVTLRKLSLQDVGMTDESASELAPLTKLQSLDMRGVSITGE 113
Query: 180 VLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLE 234
L+SL LT+LE L G + + A L +L L L T G+ L N L+
Sbjct: 114 ALQSLGQLTELERLLFRGQPIRDADLAQLAPLTKLKVLGLDDTDASAGGLEHLQNAHDLK 173
Query: 235 CLNLSFIQQVGAETDLVLSLTALQNL------------------NHLERLNLEQTQVSDA 276
L L V E ++ AL L LE L++ +T+V DA
Sbjct: 174 ELYLFNTPTVDEELAVLTKFPALAKLRLRGSDVTGSGMAELAKIGSLEDLDVSETKVDDA 233
Query: 277 TLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLK 336
++ +L L+L +TD SL L+ L+ L L++ LT++ L +LK
Sbjct: 234 GAAEIAKLPKLTDLNLWKTKVTDASLPDLAKLTTLERLNLDANDLTDANLALLAAMPNLK 293
Query: 337 LLDLHGGWLLTEDAILQFCK 356
L L G +T+ IL+ K
Sbjct: 294 WLHL-GSTSVTDAGILELAK 312
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 133/287 (46%), Gaps = 18/287 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
LG LR L++ D SA L +T L+ LD+ R V +T ++ L ++ LE+L
Sbjct: 70 LGEAVTLRKLSLQDVGMTDESA-SELAPLTKLQSLDM-RGVSITGEALQSLGQLTELERL 127
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+ +A L+ L L VL L + L LQ L+ L L+ + +
Sbjct: 128 LFRGQPIRDADLAQLAPLTKLKVLGLDDTDASAGGLEHLQNAHDLKELYLFNTPTVDEEL 187
Query: 206 AVLKMFPRLSFL-----NLAWTGVTKLPNISSLECLNLS--FIQQVGAETDLVLSLTALQ 258
AVL FP L+ L ++ +G+ +L I SLE L++S + GA +
Sbjct: 188 AVLTKFPALAKLRLRGSDVTGSGMAELAKIGSLEDLDVSETKVDDAGA--------AEIA 239
Query: 259 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 318
L L LNL +T+V+DA+L L+ L L+L LTD +L L+++ L L +
Sbjct: 240 KLPKLTDLNLWKTKVTDASLPDLAKLTTLERLNLDANDLTDANLALLAAMPNLKWLHLGS 299
Query: 319 AVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWH 365
+T++G+ +SL+ L + +T+D F + P I + H
Sbjct: 300 TSVTDAGILELAKSKSLETL-IVTRTKVTDDGAAAFAAIAPNITLQH 345
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 117/258 (45%), Gaps = 28/258 (10%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+++++RG S+ E + LG L L + + + + L L +T LK L L
Sbjct: 101 QSLDMRGV-SITGEALQSLGQLTELERL-LFRGQPIRDADLAQLAPLTKLKVLGLDDT-D 157
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
+ G++HL + L++L+L T + +A+L+ L+ L L G VT + L +
Sbjct: 158 ASAGGLEHLQNAHDLKELYLFNTPTVDEELAVLTKFPALAKLRLRGSDVTGSGMAELAKI 217
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAE 247
LE LD+ ++V + GAA + P+L+ LNL T VT
Sbjct: 218 GSLEDLDVSETKVDDAGAAEIAKLPKLTDLNLWKTKVTD--------------------- 256
Query: 248 TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 307
SL L L LERLNL+ ++DA L L+ L L L + S+TD + +L+
Sbjct: 257 ----ASLPDLAKLTTLERLNLDANDLTDANLALLAAMPNLKWLHLGSTSVTDAGILELAK 312
Query: 308 LSKLTNLSIRDAVLTNSG 325
L L + +T+ G
Sbjct: 313 SKSLETLIVTRTKVTDDG 330
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 56 FPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMT 115
FP+L + + LRG + V MA L L L+V++ + V + + +
Sbjct: 193 FPALAK--------LRLRGSD-VTGSGMAELAKIGSLEDLDVSETK-VDDAGAAEIAKLP 242
Query: 116 CLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP 175
L +L+L + KVTDA + L ++TLE+L L LT +ALL+++ NL L LG
Sbjct: 243 KLTDLNLWKT-KVTDASLPDLAKLTTLERLNLDANDLTDANLALLAAMPNLKWLHLGSTS 301
Query: 176 VTDLVLRSLQVLTKLEYLDLWGSQVSNRG 204
VTD + L LE L + ++V++ G
Sbjct: 302 VTDAGILELAKSKSLETLIVTRTKVTDDG 330
>gi|307108381|gb|EFN56621.1| hypothetical protein CHLNCDRAFT_57520 [Chlorella variabilis]
Length = 790
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 148/311 (47%), Gaps = 36/311 (11%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
++ LGA L SL + C R+ AL L G+T L++LDLS C ++T G+ L S+ L
Sbjct: 448 LSGLGALHRLTSLCMRGCDRLADGALDFLPGLTSLRQLDLSGCKELTADGLAPLSSLRLL 507
Query: 143 EKLWLSE-TGL-TADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDLWGSQ 199
L L +GL A + LS+L +L+ L+LGG + LR+L L+ L L L G +
Sbjct: 508 ACLRLQHCSGLRGAAALRPLSTLSSLTALNLGGCTAIHGQSLRALGTLSALRQLSLEGCR 567
Query: 200 -VSNRGAAVLKMFP---RLSFLNLAW------TGVTKLPNISSLECLNLS---FIQQVGA 246
V A + + P RL+ LNL G+ K+ ++ L LNLS I GA
Sbjct: 568 GVVLLDAGLEALAPSLHRLTSLNLQGCSTLTDAGLQKMGPLTGLVSLNLSECPSITGAGA 627
Query: 247 ETDLVLSLTALQNLNH----------------LERLNLEQTQ-VSDATLFPLS-TFKELI 288
+ L +LQ N L LNL+Q + V D L ++ + L
Sbjct: 628 AAWRMPLLASLQLQNSPGVDDAGLAALAGLTALRSLNLKQCKRVGDGGLAAMAPALQRLT 687
Query: 289 HLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDA-VLTNSGLGSFKPPRSLKLLDLHGGWLL 346
L L+ S +TD + QL +L L +L ++ A ++G+ + +L LDL W +
Sbjct: 688 ALCLQGMSEVTDAGVAQLGALRSLQDLELQFAWQFGDAGIAALTRLSALSRLDLMYSWKI 747
Query: 347 TEDAILQFCKM 357
T+D++ +M
Sbjct: 748 TDDSLRSLGRM 758
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 131/285 (45%), Gaps = 26/285 (9%)
Query: 69 AIELRGENSVDAEWMAY--LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCV 126
A+++ G V E + L + L LN+ C + L L + L L+L C
Sbjct: 354 ALDMAGCTGVTDEGTGFTQLSRLQQLSELNLKGCYSLADDGLELLPTLRSLAALNLQECW 413
Query: 127 KVTDAGMKHLLSISTLEKLWLSETGLTADG----IALLSSLQNLSVLDLGGLP-VTDLVL 181
+VTD G+ HL ++ LE L L A+G ++ L +L L+ L + G + D L
Sbjct: 414 QVTDRGLAHLSGLTRLEDLNLQGCRNLANGAGQSLSGLGALHRLTSLCMRGCDRLADGAL 473
Query: 182 RSLQVLTKLEYLDLWGS-QVSNRGAAVLKMFPRLSFLNL-------AWTGVTKLPNISSL 233
L LT L LDL G +++ G A L L+ L L + L +SSL
Sbjct: 474 DFLPGLTSLRQLDLSGCKELTADGLAPLSSLRLLACLRLQHCSGLRGAAALRPLSTLSSL 533
Query: 234 ECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ---VSDATLFPLS-TFKELIH 289
LNL + + SL AL L+ L +L+LE + + DA L L+ + L
Sbjct: 534 TALNLGGCTAIHGQ-----SLRALGTLSALRQLSLEGCRGVVLLDAGLEALAPSLHRLTS 588
Query: 290 LSLRNAS-LTDVSLHQLSSLSKLTNLSIRDA-VLTNSGLGSFKPP 332
L+L+ S LTD L ++ L+ L +L++ + +T +G +++ P
Sbjct: 589 LNLQGCSTLTDAGLQKMGPLTGLVSLNLSECPSITGAGAAAWRMP 633
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 126/310 (40%), Gaps = 44/310 (14%)
Query: 81 EW-MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSI 139
+W +A + LR +++ C VT + L + L L L CVK+TD G+ L +
Sbjct: 194 DWDLADVALLSTLRCVSLRGCEGVTDEGVAQLARLPRLSRLVLRNCVKLTDVGLARLAGV 253
Query: 140 ST--LEKLWLSETGLTADGIALLSS---------------LQNLSVLDLGG---LPVTDL 179
S L +LW + + L S L+ LDL G L
Sbjct: 254 SGRELPQLWAPAGPGSPPPVPRLRSPGARLPAAAAPPPCRRPPLASLDLAGCVLLTERGF 313
Query: 180 VLRSLQVLTKLEYLDLWG-SQVSNRGAAVLKMFPR---LSFLNLA--------WTGVTKL 227
+ + L L L G S+VS G VL+ R L L++A TG T+L
Sbjct: 314 AAAASGLAASLTELLLGGCSRVSTVGDGVLEAVARCRGLRALDMAGCTGVTDEGTGFTQL 373
Query: 228 PNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPLSTFKE 286
+ L LNL + + L L L L LNL++ QV+D L LS
Sbjct: 374 SRLQQLSELNLKGCYSLADD-----GLELLPTLRSLAALNLQECWQVTDRGLAHLSGLTR 428
Query: 287 LIHLSLRN----ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPP-RSLKLLDLH 341
L L+L+ A+ SL L +L +LT+L +R G F P SL+ LDL
Sbjct: 429 LEDLNLQGCRNLANGAGQSLSGLGALHRLTSLCMRGCDRLADGALDFLPGLTSLRQLDLS 488
Query: 342 GGWLLTEDAI 351
G LT D +
Sbjct: 489 GCKELTADGL 498
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 68/132 (51%), Gaps = 3/132 (2%)
Query: 69 AIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVK 127
+++L+ VD +A L LRSLN+ C+RV L A+ + L L L +
Sbjct: 637 SLQLQNSPGVDDAGLAALAGLTALRSLNLKQCKRVGDGGLAAMAPALQRLTALCLQGMSE 696
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDL-GGLPVTDLVLRSLQ 185
VTDAG+ L ++ +L+ L L D GIA L+ L LS LDL +TD LRSL
Sbjct: 697 VTDAGVAQLGALRSLQDLELQFAWQFGDAGIAALTRLSALSRLDLMYSWKITDDSLRSLG 756
Query: 186 VLTKLEYLDLWG 197
+T L L++ G
Sbjct: 757 RMTSLLSLNVLG 768
>gi|307107435|gb|EFN55678.1| hypothetical protein CHLNCDRAFT_133919 [Chlorella variabilis]
Length = 553
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 93/283 (32%), Positives = 130/283 (45%), Gaps = 35/283 (12%)
Query: 68 EAIEL-RGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCV 126
EA +L + E S E +A LG +L L + C +T L L GMT L+EL L+ C
Sbjct: 98 EAADLSKTEASGMDEVLASLGPTPHLAQLCLDYCVDLTDGGLALLQGMTSLEELSLAGCE 157
Query: 127 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLG--------GLPVTD 178
+T GM HL ++ L +L L + +A L+ L+ L LD+G VTD
Sbjct: 158 LLTAVGMGHLRGLTRLRRLSLQTCHQIS--LAPLAQLRQLEQLDVGWCSSLDDSDAQVTD 215
Query: 179 LVLRSLQVLTKLEYLDLWGSQVSNRG-AAVLKMFPRLSFLNLAWTGVTKLPNISSLECLN 237
L L L +L L+L G +VS+ AA+L+ P L LNL CL
Sbjct: 216 HGLACLHSLGQLRALNLAGVRVSDEALAALLRHLPHLRALNLE-------------RCL- 261
Query: 238 LSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 297
Q G + +S ALQ L L+L T VSD L L +L LSL N S+
Sbjct: 262 -----QAGDASLAAVSQRALQ----LRELHLGYTAVSDRGLLLLGGLTQLHVLSLENCSV 312
Query: 298 TDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
D L LS L+++ L + D +N + + R L+ L+L
Sbjct: 313 GDGGLAVLSHLTQMRQLDLSDTSASNETMSTVAAMRQLECLNL 355
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 114/247 (46%), Gaps = 26/247 (10%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWAL-TGMTCLKELDLSRCVKVTDAGM 133
+ V +A L + LR+LN+A RV+ AL AL + L+ L+L RC++ DA +
Sbjct: 210 DAQVTDHGLACLHSLGQLRALNLAG-VRVSDEALAALLRHLPHLRALNLERCLQAGDASL 268
Query: 134 KHLLSIS-TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 192
+ + L +L L T ++ G+ LL L L VL L V D L L LT++
Sbjct: 269 AAVSQRALQLRELHLGYTAVSDRGLLLLGGLTQLHVLSLENCSVGDGGLAVLSHLTQMRQ 328
Query: 193 LDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNL--------- 238
LDL + SN + + +L LNL++TGV +L +SSL CLNL
Sbjct: 329 LDLSDTSASNETMSTVAAMRQLECLNLSFTGVNDLGLKRLRRLSSLRCLNLDSRHFTDAG 388
Query: 239 --SFIQQVGAET-DLV------LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIH 289
S Q G E DL +L L +L RL + V+DA + L L H
Sbjct: 389 MVSVAQLAGLECLDLFGARIGDAGCASLSKLKNLRRLEVCGGGVTDAGVAHLVALTRLQH 448
Query: 290 LSLRNAS 296
LSL AS
Sbjct: 449 LSLAQAS 455
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 72/157 (45%), Gaps = 6/157 (3%)
Query: 77 SVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHL 136
SV +A L +R L+++D ++ + + M L+ L+LS V D G+K L
Sbjct: 311 SVGDGGLAVLSHLTQMRQLDLSD-TSASNETMSTVAAMRQLECLNLSF-TGVNDLGLKRL 368
Query: 137 LSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLW 196
+S+L L L T G+ ++ L L LDL G + D SL L L L++
Sbjct: 369 RRLSSLRCLNLDSRHFTDAGMVSVAQLAGLECLDLFGARIGDAGCASLSKLKNLRRLEVC 428
Query: 197 GSQVSNRGAAVLKMFPRLSFLNLAWT----GVTKLPN 229
G V++ G A L RL L+LA G LPN
Sbjct: 429 GGGVTDAGVAHLVALTRLQHLSLAQASACWGSCTLPN 465
>gi|390335362|ref|XP_003724129.1| PREDICTED: uncharacterized protein LOC100890653 [Strongylocentrotus
purpuratus]
Length = 990
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 142/302 (47%), Gaps = 16/302 (5%)
Query: 34 LERLPAHLADSLLRHLIRRRLIFPSLLEVF-KHNAEAIELRGENSVDAEWMAYLGAFRYL 92
LE +P +A+ LL L + + P L +F + + + L E + + +L
Sbjct: 586 LEAVPPTVAERLLTELKKSGHLRPKTLMMFIPCHLQRLALDCYKYTTNELLQTVRPHIHL 645
Query: 93 RSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGL 152
SLN+A C +T L +T + L+ L+LS +TD + + S+L L L TG+
Sbjct: 646 SSLNLASCPLITDQGLLQITSLKKLQHLNLSNNKSLTDKVFQTVQEFSSLTTLLLEGTGV 705
Query: 153 TADGIALLSSL--QNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKM 210
T G+ ++ NL+ L L VTD+ + L L+KL+ L L +QV + +
Sbjct: 706 TDAGLETFVAVPPPNLTNLSLNRTNVTDMAVLFLARLSKLKNLGLEQTQV--KSLEHVGH 763
Query: 211 FPRLSFLNLAWT-----GVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
+L LN++ + KL ++ L+ L++S ++ + + +LT LQ L L +
Sbjct: 764 LSQLVSLNVSRNRLQRDALLKLHQVTHLKVLHISHVEGITGDE----ALTCLQGL-QLMQ 818
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAVLTNS 324
L+L + L + L + S +TD +H L+ ++ L LSI + +T++
Sbjct: 819 LSLPDRHTTTDNGLKCIAGMSLCSIDLTDYSNITDAGIHHLADMTSLHKLSITNTKVTSA 878
Query: 325 GL 326
G+
Sbjct: 879 GM 880
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 84/156 (53%), Gaps = 9/156 (5%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
L L++ D T + L + GM+ L +DL+ +TDAG+ HL +++L KL ++ T
Sbjct: 816 LMQLSLPDRHTTTDNGLKCIAGMS-LCSIDLTDYSNITDAGIHHLADMTSLHKLSITNTK 874
Query: 152 LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG--AAVLK 209
+T+ G+ LS L L L L V D + + LTKL+ L + +++++R + V+
Sbjct: 875 VTSAGMQYLSGLTELLELHLDRTLVDDEGAKVIGQLTKLQVLSMAETKITDRFLLSNVIN 934
Query: 210 MFPRLSFLNLAWT-----GVTKLPNISSLECLNLSF 240
P +S LNL+ T G+T L ++ L LNL +
Sbjct: 935 SCPHISRLNLSRTNISERGITVL-SLPYLTLLNLDY 969
>gi|46447568|ref|YP_008933.1| hypothetical protein pc1934 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401209|emb|CAF24658.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 261
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 90/272 (33%), Positives = 139/272 (51%), Gaps = 35/272 (12%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE-- 149
L+ LN++ C ++T++ L LT + L+ L+LSRC ++TDAG+ HL ++ L+ L LS
Sbjct: 3 LKYLNLSGCSKLTNAGLAHLTPLKTLQHLNLSRCSRLTDAGLAHLTPLTALQHLGLSYCE 62
Query: 150 --TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAV 207
T +ALL++LQ+L++ + L TD+ L L LT L++LDL SN
Sbjct: 63 NLTDAGLAHLALLTALQDLALANCKHL--TDVGLVHLTPLTSLQHLDL-----SN----- 110
Query: 208 LKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLS----LTALQNLNHL 263
+NL G+ L +++L+ L LS + TD L+ LTALQ L L
Sbjct: 111 --------CMNLTDDGLVHLTPLTALQHLVLSGCDNL---TDAGLAHLTPLTALQTLG-L 158
Query: 264 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR-DAVLT 322
R T A L PL+ + L +N L D L L+ L+ L L ++ + LT
Sbjct: 159 RRWCQNLTGDGLAHLAPLTALQTLDLSYCKN--LKDAGLAHLTPLTALQTLGLKWCSKLT 216
Query: 323 NSGLGSFKPPRSLKLLDLHGGWLLTEDAILQF 354
++GL KP +L+ LDL LT+ + +F
Sbjct: 217 DAGLAHLKPLAALQHLDLSHCRSLTDAGLARF 248
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 130/259 (50%), Gaps = 17/259 (6%)
Query: 70 IELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVT 129
+ L G + + +A+L + L+ LN++ C R+T + L LT +T L+ L LS C +T
Sbjct: 6 LNLSGCSKLTNAGLAHLTPLKTLQHLNLSRCSRLTDAGLAHLTPLTALQHLGLSYCENLT 65
Query: 130 DAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLGG-LPVTDLVLRSLQVL 187
DAG+ HL ++ L+ L L+ LT G+ L+ L +L LDL + +TD L L L
Sbjct: 66 DAGLAHLALLTALQDLALANCKHLTDVGLVHLTPLTSLQHLDLSNCMNLTDDGLVHLTPL 125
Query: 188 TKLEYLDLWGS-QVSNRGAAVLKMFPRLSFL-------NLAWTGVTKLPNISSLECLNLS 239
T L++L L G +++ G A L L L NL G+ L +++L+ L+LS
Sbjct: 126 TALQHLVLSGCDNLTDAGLAHLTPLTALQTLGLRRWCQNLTGDGLAHLAPLTALQTLDLS 185
Query: 240 FIQQVGAETDLVLSLTALQNLNHLERLNLE-QTQVSDATLFPLSTFKELIHLSLRNA-SL 297
+ + + L L L L+ L L+ ++++DA L L L HL L + SL
Sbjct: 186 YCKNLKDA-----GLAHLTPLTALQTLGLKWCSKLTDAGLAHLKPLAALQHLDLSHCRSL 240
Query: 298 TDVSLHQLSSLSKLTNLSI 316
TD L + L+ NL I
Sbjct: 241 TDAGLARFKILATSLNLEI 259
>gi|226534290|gb|ACO71421.1| AT4G23840-like protein [Capsella rubella]
gi|226534292|gb|ACO71422.1| AT4G23840-like protein [Capsella rubella]
gi|226534294|gb|ACO71423.1| AT4G23840-like protein [Capsella rubella]
gi|226534296|gb|ACO71424.1| AT4G23840-like protein [Capsella rubella]
gi|226534298|gb|ACO71425.1| AT4G23840-like protein [Capsella rubella]
gi|226534300|gb|ACO71426.1| AT4G23840-like protein [Capsella rubella]
gi|226534302|gb|ACO71427.1| AT4G23840-like protein [Capsella rubella]
gi|226534304|gb|ACO71428.1| AT4G23840-like protein [Capsella rubella]
gi|226534306|gb|ACO71429.1| AT4G23840-like protein [Capsella rubella]
gi|226534308|gb|ACO71430.1| AT4G23840-like protein [Capsella rubella]
gi|226534310|gb|ACO71431.1| AT4G23840-like protein [Capsella rubella]
gi|226534312|gb|ACO71432.1| AT4G23840-like protein [Capsella rubella]
gi|226534314|gb|ACO71433.1| AT4G23840-like protein [Capsella rubella]
gi|226534316|gb|ACO71434.1| AT4G23840-like protein [Capsella rubella]
gi|226534318|gb|ACO71435.1| AT4G23840-like protein [Capsella rubella]
gi|226534320|gb|ACO71436.1| AT4G23840-like protein [Capsella rubella]
gi|226534324|gb|ACO71438.1| AT4G23840-like protein [Capsella rubella]
gi|226534326|gb|ACO71439.1| AT4G23840-like protein [Capsella rubella]
gi|226534328|gb|ACO71440.1| AT4G23840-like protein [Capsella rubella]
gi|226534330|gb|ACO71441.1| AT4G23840-like protein [Capsella rubella]
gi|226534332|gb|ACO71442.1| AT4G23840-like protein [Capsella rubella]
gi|226534334|gb|ACO71443.1| AT4G23840-like protein [Capsella rubella]
gi|226534336|gb|ACO71444.1| AT4G23840-like protein [Capsella rubella]
gi|226534338|gb|ACO71445.1| AT4G23840-like protein [Capsella rubella]
gi|226534340|gb|ACO71446.1| AT4G23840-like protein [Capsella grandiflora]
gi|226534346|gb|ACO71449.1| AT4G23840-like protein [Capsella grandiflora]
gi|226534350|gb|ACO71451.1| AT4G23840-like protein [Capsella grandiflora]
Length = 90
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 40/53 (75%)
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLS 239
LTKLEYLD+WGS V+N GA + F LSFLNL+WT VT+ NI LECL+++
Sbjct: 2 LTKLEYLDIWGSNVTNLGAICILKFSNLSFLNLSWTSVTQTLNIPHLECLHMN 54
>gi|406831323|ref|ZP_11090917.1| hypothetical protein SpalD1_06790 [Schlesneria paludicola DSM
18645]
Length = 539
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 136/304 (44%), Gaps = 29/304 (9%)
Query: 69 AIELRGENSVDAEWMAYLGAFRYLRSLNVA----DCRRVTSSALWALTGMTCLKELDLSR 124
I+ G E +++L L L+ + + + L +++ + L+EL+LS
Sbjct: 189 GIQFEGAPQFTVEGLSHLSKLTNLERLSASFSSQSANELGDATLRSISEIESLRELNLSE 248
Query: 125 CVKVTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDL--------GGLP 175
C VTD G+K L + L L + + G LT ++ ++ L++L VL L G +
Sbjct: 249 C-GVTDEGLKSLEKLPNLTHLSIYQEGRLTDAALSTIAKLKHLKVLTLTTHVGTPLGRMH 307
Query: 176 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLEC 235
++ L LT+LE+LDL G VS L FPRL L + + +C
Sbjct: 308 FSESATNQLIALTELEHLDLSGHDVSTD----LLNFPRLKSLRINRNQFDDDLAKAIAKC 363
Query: 236 LNLSFIQQVGAE-TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 294
L+ + +E TD +L L+ L L +L++ ++SD + L F L ++L
Sbjct: 364 RELTHLDVSCSEMTDT--ALEHLRPLPSLTQLHIRAEEISDNAIAHLKLFPNLASVTLHT 421
Query: 295 ASLTDVSLHQLSSLSKLTNLSIRDAV--LTNSGLGSFKPPRSLKLLDLH------GGWLL 346
A LTD SL LS + LT L + A + GL +L+ L+L GG L
Sbjct: 422 AELTDKSLEYLSQTASLTKLDLNWATNHFSRHGLEQLANLPNLETLELRIIPFQGGGLKL 481
Query: 347 TEDA 350
DA
Sbjct: 482 IRDA 485
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 128/296 (43%), Gaps = 30/296 (10%)
Query: 57 PSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC 116
P L + + L ++ + +A LR + + T L L+ +T
Sbjct: 152 PKLRIFSDDDGNVVSLSDYGVLNDKALAKFSVLSTLRGIQFEGAPQFTVEGLSHLSKLTN 211
Query: 117 LKELDLS----RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDL- 171
L+ L S ++ DA ++ + I +L +L LSE G+T +G+ L L NL+ L +
Sbjct: 212 LERLSASFSSQSANELGDATLRSISEIESLRELNLSECGVTDEGLKSLEKLPNLTHLSIY 271
Query: 172 --GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
G L TD L ++ L L+ L L ++ G + +M + + + +L
Sbjct: 272 QEGRL--TDAALSTIAKLKHLKVLTL----TTHVGTPLGRM-------HFSESATNQLIA 318
Query: 230 ISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIH 289
++ LE L+LS G + T L N L+ L + + Q D ++ +EL H
Sbjct: 319 LTELEHLDLS-----GHDVS-----TDLLNFPRLKSLRINRNQFDDDLAKAIAKCRELTH 368
Query: 290 LSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 345
L + + +TD +L L L LT L IR ++++ + K +L + LH L
Sbjct: 369 LDVSCSEMTDTALEHLRPLPSLTQLHIRAEEISDNAIAHLKLFPNLASVTLHTAEL 424
>gi|168701995|ref|ZP_02734272.1| hypothetical protein GobsU_20883 [Gemmata obscuriglobus UQM 2246]
Length = 684
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 102/210 (48%), Gaps = 10/210 (4%)
Query: 102 RVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLS 161
RVT +AL L + L+ L L+ VTDAG+ + +L L LS T +T G+ L+
Sbjct: 317 RVTDAALGYLKNLARLQFLSLT-GTDVTDAGLARIRERKSLTTLHLSSTKVTNAGLVHLA 375
Query: 162 SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW 221
L LS + L G V+D L L+ LT L+ L L ++V G A + RL L L
Sbjct: 376 GLAGLSHIHLDGTGVSDAGLVHLKGLTDLKTLGLSRTRVLGPGLAHTHSWKRLDALYLTN 435
Query: 222 TGVTK--LPNISSLECLNLSFIQQVGAE-TDLV-LSLTALQNLNHLERLNLEQTQVSDAT 277
TGVT ++S L + +GA+ T L + +++L L LNL T V DA
Sbjct: 436 TGVTDEAFAHLSPHHTL-----RHLGADGTGLTDAGMAHVRHLTGLISLNLSDTAVGDAG 490
Query: 278 LFPLSTFKELIHLSLRNASLTDVSLHQLSS 307
L L + HL++RN +T LH +
Sbjct: 491 LMQLGSNAGPTHLTVRNTKVTLRGLHAFHA 520
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 103/234 (44%), Gaps = 17/234 (7%)
Query: 113 GMTCLKELDLS-RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDL 171
G L ++LS R VK D G L + L +L L ET +T + L +L L L L
Sbjct: 280 GPLALARVNLSDRSVKDDDLG--RLAGCTGLTELVLHETRVTDAALGYLKNLARLQFLSL 337
Query: 172 GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK----- 226
G VTD L ++ L L L ++V+N G L LS ++L TGV+
Sbjct: 338 TGTDVTDAGLARIRERKSLTTLHLSSTKVTNAGLVHLAGLAGLSHIHLDGTGVSDAGLVH 397
Query: 227 LPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 286
L ++ L+ L LS + +G L + L+ L L T V+D LS
Sbjct: 398 LKGLTDLKTLGLSRTRVLGP------GLAHTHSWKRLDALYLTNTGVTDEAFAHLSPHHT 451
Query: 287 LIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG---LGSFKPPRSLKL 337
L HL LTD + + L+ L +L++ D + ++G LGS P L +
Sbjct: 452 LRHLGADGTGLTDAGMAHVRHLTGLISLNLSDTAVGDAGLMQLGSNAGPTHLTV 505
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 81/190 (42%), Gaps = 26/190 (13%)
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
V DA + L L ++ L T +T G+A L L NL+ L+L VTD L L
Sbjct: 51 VADADLARLKDCQALTRIILHGTKVTDAGLAHLKGLSNLAHLNLAYSGVTDAGLADLNAF 110
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAE 247
L L + G+ VS+ G AV + P L+ ++L+ T VT P ++ L+ L + G
Sbjct: 111 PLLTSLWVQGTTVSDAGLAVARELPALTHIDLSGTKVTG-PGLAHLKGLKGLTLLLSG-- 167
Query: 248 TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 307
T ++DA L L ++ LSL + LTD L L
Sbjct: 168 -----------------------TALTDANLCYLKGLTGVVELSLSDTPLTDAGLSHLHD 204
Query: 308 LSKLTNLSIR 317
L L L +R
Sbjct: 205 LKALGTLDVR 214
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 111/249 (44%), Gaps = 37/249 (14%)
Query: 58 SLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCL 117
SL + N E E+R + A+ A A R++ AD R+ ALT +
Sbjct: 14 SLNGAVQVNGEEREIRSAADLPADRFALTAADLTDRAVADADLARLKDC--QALTRI--- 68
Query: 118 KELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVT 177
+ KVTDAG+ HL +S L L L+ +G+T G+A DL P
Sbjct: 69 ----ILHGTKVTDAGLAHLKGLSNLAHLNLAYSGVTDAGLA-----------DLNAFP-- 111
Query: 178 DLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLN 237
+L SL V G+ VS+ G AV + P L+ ++L+ T VT P ++ L+ L
Sbjct: 112 --LLTSLWV---------QGTTVSDAGLAVARELPALTHIDLSGTKVTG-PGLAHLKGLK 159
Query: 238 LSFIQQVG-AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 296
+ G A TD +L L+ L + L+L T ++DA L L K L L +R
Sbjct: 160 GLTLLLSGTALTD--ANLCYLKGLTGVVELSLSDTPLTDAGLSHLHDLKALGTLDVRKTR 217
Query: 297 LTDVSLHQL 305
T SL +L
Sbjct: 218 ATPASLAEL 226
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 86/177 (48%), Gaps = 6/177 (3%)
Query: 166 LSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 225
L+ DL V D L L+ L + L G++V++ G A LK L+ LNLA++GVT
Sbjct: 41 LTAADLTDRAVADADLARLKDCQALTRIILHGTKVTDAGLAHLKGLSNLAHLNLAYSGVT 100
Query: 226 K--LPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLST 283
L ++++ L ++Q T L + L L ++L T+V+ L L
Sbjct: 101 DAGLADLNAFPLLTSLWVQ---GTTVSDAGLAVARELPALTHIDLSGTKVTGPGLAHLKG 157
Query: 284 FKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
K L L L +LTD +L L L+ + LS+ D LT++GL ++L LD+
Sbjct: 158 LKGLT-LLLSGTALTDANLCYLKGLTGVVELSLSDTPLTDAGLSHLHDLKALGTLDV 213
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%)
Query: 254 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 313
L L++ L R+ L T+V+DA L L L HL+L + +TD L L++ LT+
Sbjct: 56 LARLKDCQALTRIILHGTKVTDAGLAHLKGLSNLAHLNLAYSGVTDAGLADLNAFPLLTS 115
Query: 314 LSIRDAVLTNSGLGSFKPPRSLKLLDLHG 342
L ++ ++++GL + +L +DL G
Sbjct: 116 LWVQGTTVSDAGLAVARELPALTHIDLSG 144
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 115/244 (47%), Gaps = 10/244 (4%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIA-LLS 161
+T + L L G+T + EL LS +TDAG+ HL + L L + +T T +A L
Sbjct: 170 LTDANLCYLKGLTGVVELSLSD-TPLTDAGLSHLHDLKALGTLDVRKTRATPASLAELHK 228
Query: 162 SLQNLSVLDLGG-LPVTDLV-LRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFP-RLSFLN 218
S+ + D G P D+ L + VL+ + + G R AA L P L+ +N
Sbjct: 229 SVPGCRIRDSAGDRPPLDVNRLAAEWVLSVGGSVGVSGQPRDIRAAADLPQGPLALARVN 288
Query: 219 LAWTGVTKLPNISSLE-CLNLS-FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDA 276
L+ V K ++ L C L+ + TD L L+NL L+ L+L T V+DA
Sbjct: 289 LSDRSV-KDDDLGRLAGCTGLTELVLHETRVTDAALGY--LKNLARLQFLSLTGTDVTDA 345
Query: 277 TLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLK 336
L + K L L L + +T+ L L+ L+ L+++ + ++++GL K LK
Sbjct: 346 GLARIRERKSLTTLHLSSTKVTNAGLVHLAGLAGLSHIHLDGTGVSDAGLVHLKGLTDLK 405
Query: 337 LLDL 340
L L
Sbjct: 406 TLGL 409
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 169 LDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-- 226
L L GL V+D L +L+ LT + LDL GS ++N G A LK L L L+ T VT
Sbjct: 579 LALNGLAVSDTELAALKYLTGMSRLDLAGSAITNDGLAHLKGLTGLRRLGLSETRVTDAG 638
Query: 227 LPNISSLECLNLSF----IQQVGAE 247
L I +L L + Q GAE
Sbjct: 639 LDAIKALPLTELDLLGTAVTQKGAE 663
>gi|301118238|ref|XP_002906847.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262108196|gb|EEY66248.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 648
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 139/305 (45%), Gaps = 25/305 (8%)
Query: 70 IELRGENSVDAEWMAYLGAFRYLRSLNVADCRR--VTSSALWALTGMTCLKELDLSRCVK 127
+ LRG + V + L + L++LN+ C + +T + AL +T L L+LS C +
Sbjct: 223 LNLRGCSQVGDNGIRALARLKNLQTLNLWYCNQGALTDGGISALAEVTSLTSLNLSNCSQ 282
Query: 128 VTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQ 185
+TD G+ L ++ L L ++ G +T G L+ L NL LD+ G +TD L
Sbjct: 283 LTDEGISSLSTLVKLRHLEIANVGEVTDQGFLALAPLVNLVTLDVAGCYNITDAGTEVLV 342
Query: 186 VLTKLEYLDLW-GSQVSNRGAAVLKMFPRLSFLNLAWTG---------VTKLPNISSLEC 235
KL +LW S++ + ++ ++ FLN G + KL N++SL+
Sbjct: 343 NFPKLASCNLWYCSEIGDATFQHMESLTKMRFLNFMKCGKVTDRGLRSIAKLRNLTSLDM 402
Query: 236 LNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRN 294
++ + G L L LN L+ L L + + D + LS L+ L L N
Sbjct: 403 VSCFNVTDEG--------LNELSKLNRLKSLYLGGCSGIRDEGIAALSHLSSLVILDLSN 454
Query: 295 A-SLTDVSLHQLSSLSKLTNLSI-RDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAIL 352
+ + +L + +L LTNL++ R + + G+ LK L+L LLT+ A
Sbjct: 455 CRQVGNKALLGIGALRNLTNLNLMRCNRIDDDGIAHLAGLTRLKTLNLANCRLLTDRATK 514
Query: 353 QFCKM 357
+M
Sbjct: 515 TVAQM 519
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 142/315 (45%), Gaps = 44/315 (13%)
Query: 81 EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
E ++ L LR L +A+ VT AL + L LD++ C +TDAG + L++
Sbjct: 286 EGISSLSTLVKLRHLEIANVGEVTDQGFLALAPLVNLVTLDVAGCYNITDAGTEVLVNFP 345
Query: 141 TLE--KLW-LSETG-LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLW 196
L LW SE G T + L+ ++ L+ + G VTD LRS+ L L LD+
Sbjct: 346 KLASCNLWYCSEIGDATFQHMESLTKMRFLNFMKCG--KVTDRGLRSIAKLRNLTSLDMV 403
Query: 197 GS-QVSNRGAAVLKMFPRLSFLNLAWT------GVTKLPNISSLECLNLSFIQQVGAETD 249
V++ G L RL L L G+ L ++SSL L+LS +QVG +
Sbjct: 404 SCFNVTDEGLNELSKLNRLKSLYLGGCSGIRDEGIAALSHLSSLVILDLSNCRQVGNKA- 462
Query: 250 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-------------- 295
+L + AL+NL +L + ++ D + L+ L L+L N
Sbjct: 463 -LLGIGALRNLTNLNLMRCN--RIDDDGIAHLAGLTRLKTLNLANCRLLTDRATKTVAQM 519
Query: 296 ------------SLTDVSLHQLSSLSKLTNLSIRD-AVLTNSGLGSFKPPRSLKLLDLHG 342
LTD + LS+L+KL ++ + + LT++ L +F +L LDL
Sbjct: 520 TGLESLVLWYCNKLTDAGILNLSTLTKLQSIDLASCSKLTDASLEAFLNMPNLTSLDLGN 579
Query: 343 GWLLTEDAILQFCKM 357
LL+++ +L K+
Sbjct: 580 CCLLSDEGMLTLSKV 594
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 132/269 (49%), Gaps = 20/269 (7%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE-T 150
+R LN C +VT L ++ + L LD+ C VTD G+ L ++ L+ L+L +
Sbjct: 372 MRFLNFMKCGKVTDRGLRSIAKLRNLTSLDMVSCFNVTDEGLNELSKLNRLKSLYLGGCS 431
Query: 151 GLTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDLW-GSQVSNRGAAVL 208
G+ +GIA LS L +L +LDL V + L + L L L+L +++ + G A L
Sbjct: 432 GIRDEGIAALSHLSSLVILDLSNCRQVGNKALLGIGALRNLTNLNLMRCNRIDDDGIAHL 491
Query: 209 KMFPRLSFLNLAWT------GVTKLPNISSLECLNLSFIQQVGAETDL-VLSLTALQNLN 261
RL LNLA + ++ LE L L + ++ TD +L+L+ L L
Sbjct: 492 AGLTRLKTLNLANCRLLTDRATKTVAQMTGLESLVLWYCNKL---TDAGILNLSTLTKLQ 548
Query: 262 HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRD-A 319
++ + ++++DA+L L L L N L+D + LS ++ LT+L++ +
Sbjct: 549 SIDLASC--SKLTDASLEAFLNMPNLTSLDLGNCCLLSDEGMLTLSKVTSLTSLNLSECG 606
Query: 320 VLTNSGLGSFKPPRSLKLLDLHGGWLLTE 348
+T++GL K +L ++L W T+
Sbjct: 607 EITDTGLEHLKTLVNLSSVNL---WYCTK 632
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 88/162 (54%), Gaps = 9/162 (5%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N +D + +A+L L++LN+A+CR +T A + MT L+ L L C K+TDAG+ +
Sbjct: 481 NRIDDDGIAHLAGLTRLKTLNLANCRLLTDRATKTVAQMTGLESLVLWYCNKLTDAGILN 540
Query: 136 LLSISTLEKLWL-SETGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYL 193
L +++ L+ + L S + LT + ++ NL+ LDLG ++D + +L +T L L
Sbjct: 541 LSTLTKLQSIDLASCSKLTDASLEAFLNMPNLTSLDLGNCCLLSDEGMLTLSKVTSLTSL 600
Query: 194 DL-WGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLP 228
+L ++++ G LK LS +NL + G+ LP
Sbjct: 601 NLSECGEITDTGLEHLKTLVNLSSVNLWYCTKVTPVGINFLP 642
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 133/281 (47%), Gaps = 41/281 (14%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQ--NLSVLDLGG 173
LKE++L+ C +TD ++ L ++S L + L +T I LL+ Q +L+ ++LG
Sbjct: 142 LKEVNLTGCSSLTDESVEQLANLSGLTSVALKGCYQVTDKSIKLLTESQSNSLTSVNLGY 201
Query: 174 LP-VTDLVLRSLQV-LTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWT-------- 222
V+D + ++ L+KL YL+L G SQV + G L L LNL +
Sbjct: 202 CKVVSDEGITAIASNLSKLNYLNLRGCSQVGDNGIRALARLKNLQTLNLWYCNQGALTDG 261
Query: 223 GVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT----------- 271
G++ L ++SL LNLS Q+ E + SL+ L L HLE N+ +
Sbjct: 262 GISALAEVTSLTSLNLSNCSQLTDEG--ISSLSTLVKLRHLEIANVGEVTDQGFLALAPL 319
Query: 272 ------------QVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLS-IR 317
++DA L F +L +L S + D + + SL+K+ L+ ++
Sbjct: 320 VNLVTLDVAGCYNITDAGTEVLVNFPKLASCNLWYCSEIGDATFQHMESLTKMRFLNFMK 379
Query: 318 DAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMH 358
+T+ GL S R+L LD+ + +T++ + + K++
Sbjct: 380 CGKVTDRGLRSIAKLRNLTSLDMVSCFNVTDEGLNELSKLN 420
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 135/287 (47%), Gaps = 17/287 (5%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N +++ G ++ L F L S N+ C + + + +T ++ L+ +C
Sbjct: 321 NLVTLDVAGCYNITDAGTEVLVNFPKLASCNLWYCSEIGDATFQHMESLTKMRFLNFMKC 380
Query: 126 VKVTDAGMKHLLSISTLEKL-WLSETGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRS 183
KVTD G++ + + L L +S +T +G+ LS L L L LGG + D + +
Sbjct: 381 GKVTDRGLRSIAKLRNLTSLDMVSCFNVTDEGLNELSKLNRLKSLYLGGCSGIRDEGIAA 440
Query: 184 LQVLTKLEYLDLWGS-QVSNRGAAVLKMFPRLSFLNLAWT------GVTKLPNISSLECL 236
L L+ L LDL QV N+ + L+ LNL G+ L ++ L+ L
Sbjct: 441 LSHLSSLVILDLSNCRQVGNKALLGIGALRNLTNLNLMRCNRIDDDGIAHLAGLTRLKTL 500
Query: 237 NLSFIQQVGAE-TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 295
NL+ + + T V +T L++L L N +++DA + LST +L + L +
Sbjct: 501 NLANCRLLTDRATKTVAQMTGLESL-VLWYCN----KLTDAGILNLSTLTKLQSIDLASC 555
Query: 296 S-LTDVSLHQLSSLSKLTNLSIRD-AVLTNSGLGSFKPPRSLKLLDL 340
S LTD SL ++ LT+L + + +L++ G+ + SL L+L
Sbjct: 556 SKLTDASLEAFLNMPNLTSLDLGNCCLLSDEGMLTLSKVTSLTSLNL 602
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 107/214 (50%), Gaps = 22/214 (10%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+++ L G + + E +A L L L++++CR+V + AL + + L L+L RC +
Sbjct: 423 KSLYLGGCSGIRDEGIAALSHLSSLVILDLSNCRQVGNKALLGIGALRNLTNLNLMRCNR 482
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTAD----GIALLSSLQNLSVLDLGGLPVTDLVLRS 183
+ D G+ HL ++ L+ L L+ L D +A ++ L++L + L TD + +
Sbjct: 483 IDDDGIAHLAGLTRLKTLNLANCRLLTDRATKTVAQMTGLESLVLWYCNKL--TDAGILN 540
Query: 184 LQVLTKLEYLDLWGSQVSNRGAAVLKMF---PRLSFLNLAWT------GVTKLPNISSLE 234
L LTKL+ +DL + S A L+ F P L+ L+L G+ L ++SL
Sbjct: 541 LSTLTKLQSIDL--ASCSKLTDASLEAFLNMPNLTSLDLGNCCLLSDEGMLTLSKVTSLT 598
Query: 235 CLNLSFIQQVGAETDLVLSLTALQNLNHLERLNL 268
LNLS + G TD L L+ L +L +NL
Sbjct: 599 SLNLS---ECGEITD--TGLEHLKTLVNLSSVNL 627
>gi|384252696|gb|EIE26172.1| RNI-like protein [Coccomyxa subellipsoidea C-169]
Length = 663
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 141/313 (45%), Gaps = 39/313 (12%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCL------KELDLSRCVKVT 129
+ AE A+L + L SL R SA L M CL +EL L+ + +
Sbjct: 235 GAYPAEGDAFLKSLTKLSSL-----RMRNDSATAKLPPMHCLSELRSLQELSLTEHLHLL 289
Query: 130 DAGMKHLLSISTLEKLWLSETGLTADGI----ALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
G+ +L +++ L +L L + G+T +G+ L+ LQ+L + D VTD L L
Sbjct: 290 LPGLTNLSALTDLRQLRLVKVGVT-NGVLRCAGALTKLQSLHIPD--AFRVTDTGLHHLS 346
Query: 186 VLTKLEYLDLWG------SQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSL 233
LT L +LD ++N G A L L LNLA G+ L + ++L
Sbjct: 347 SLTGLTHLDFCSPSHRRDEDITNAGVAALSALTNLRSLNLAGHSEVTAEGLAFLADATAL 406
Query: 234 ECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 293
CL+LS G + L +L +L L L++TQ+S+ + L + L L L
Sbjct: 407 TCLDLS-----GLPLGPTGGVDFLASLTNLRSLCLQRTQLSNEHVQQLGSLTALTSLGLA 461
Query: 294 NASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG--GWLLTEDAI 351
++ D + L+ L+KL +L +R +TN+GL R++ L + G T I
Sbjct: 462 WCAIDDEAAAALAPLTKLADLDVRYCPMTNAGLCQLS--RAMPDLAIFAVEGCPATSIGI 519
Query: 352 LQFCKMHPRIEVW 364
+ H ++++W
Sbjct: 520 WRLLSRHRKLKLW 532
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 61/132 (46%)
Query: 73 RGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAG 132
R + + +A L A LRSLN+A VT+ L L T L LDLS G
Sbjct: 362 RRDEDITNAGVAALSALTNLRSLNLAGHSEVTAEGLAFLADATALTCLDLSGLPLGPTGG 421
Query: 133 MKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 192
+ L S++ L L L T L+ + + L SL L+ L L + D +L LTKL
Sbjct: 422 VDFLASLTNLRSLCLQRTQLSNEHVQQLGSLTALTSLGLAWCAIDDEAAAALAPLTKLAD 481
Query: 193 LDLWGSQVSNRG 204
LD+ ++N G
Sbjct: 482 LDVRYCPMTNAG 493
>gi|290998894|ref|XP_002682015.1| predicted protein [Naegleria gruberi]
gi|284095641|gb|EFC49271.1| predicted protein [Naegleria gruberi]
Length = 413
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 123/255 (48%), Gaps = 15/255 (5%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
+SVD + ++ + L SL++ R+ + ++ M L L++S ++++D G K+
Sbjct: 121 DSVDQ--LKFISEMKQLTSLDIY-SNRIGVEGVKYISEMKQLTSLNISE-IEISDEGAKY 176
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ + L L++ + +G +S ++ L+ L++G ++D + + + +L L +
Sbjct: 177 ISEMKQLTSLYIHNNEIGDEGSKHISEMKQLTSLNIGCNEISDEGAKHISEMNQLISLSI 236
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNL-----AWTGVTKLPNISSLECLNLSFIQQVGAETDL 250
+++ + G + +L+ L++ G + + L LN+ F ++G E
Sbjct: 237 GYNRIGDEGFKYISEMKQLTSLDITDDEIGDEGAKYISEMKQLTSLNIGF-NEIGDEGAK 295
Query: 251 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 310
+S L L L++ +T++SD +S K+LI L++ ++D +S L +
Sbjct: 296 YIS-----ELKQLTSLDISETEISDEGAKYISEMKQLIWLTIGYNEISDKGAKYISELKQ 350
Query: 311 LTNLSIRDAVLTNSG 325
LT+L I D + N G
Sbjct: 351 LTSLDITDNKIGNEG 365
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 83/175 (47%), Gaps = 10/175 (5%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N + E Y+ + L SL++ D + ++ M L L++ ++ D G
Sbjct: 237 GYNRIGDEGFKYISEMKQLTSLDITD-DEIGDEGAKYISEMKQLTSLNIG-FNEIGDEGA 294
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
K++ + L L +SET ++ +G +S ++ L L +G ++D + + L +L L
Sbjct: 295 KYISELKQLTSLDISETEISDEGAKYISEMKQLIWLTIGYNEISDKGAKYISELKQLTSL 354
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWT--------GVTKLPNISSLECLNLSF 240
D+ +++ N GA + +L LN+ + ++++ ++SL ++L F
Sbjct: 355 DITDNKIGNEGAKYISEMNQLISLNIGYNRIGDEGAKYISEMKQLTSLRQISLGF 409
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 108/248 (43%), Gaps = 17/248 (6%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + E + Y+ + L SLN+++ ++ ++ M L L + ++ D G KH
Sbjct: 143 NRIGVEGVKYISEMKQLTSLNISEIE-ISDEGAKYISEMKQLTSLYIHNN-EIGDEGSKH 200
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ + L L + ++ +G +S + L L +G + D + + + +L LD+
Sbjct: 201 ISEMKQLTSLNIGCNEISDEGAKHISEMNQLISLSIGYNRIGDEGFKYISEMKQLTSLDI 260
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSF--IQQVGAET 248
++ + GA + +L+ LN+ + G + + L L++S I GA+
Sbjct: 261 TDDEIGDEGAKYISEMKQLTSLNIGFNEIGDEGAKYISELKQLTSLDISETEISDEGAK- 319
Query: 249 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 308
+ + L L + ++SD +S K+L L + + + + +S +
Sbjct: 320 -------YISEMKQLIWLTIGYNEISDKGAKYISELKQLTSLDITDNKIGNEGAKYISEM 372
Query: 309 SKLTNLSI 316
++L +L+I
Sbjct: 373 NQLISLNI 380
>gi|330506767|ref|YP_004383195.1| internalin-A [Methanosaeta concilii GP6]
gi|328927575|gb|AEB67377.1| internalin-A, putative [Methanosaeta concilii GP6]
Length = 567
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 123/225 (54%), Gaps = 25/225 (11%)
Query: 110 ALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVL 169
+L+G+T L +LDLS ++TDA L ++ L L L +T ++ LS L NL L
Sbjct: 161 SLSGLTNLTDLDLSTN-QITDA--SPLSGLTNLTDLDLDNNQIT--DVSSLSGLINLMNL 215
Query: 170 DLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK--L 227
DL +T++ SL LT + +LDLWG+Q+++ + L NL W V++ +
Sbjct: 216 DLSSNRITNV---SLSGLTNVVWLDLWGNQITDVTLSGLT--------NLTWLDVSRNQI 264
Query: 228 PNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 287
++SSL L + + ++ + + +++L L +L L+L Q++DA+ PLS L
Sbjct: 265 ADVSSLSGL--TNLTKLYLGCNQITDVSSLSGLTNLTDLDLSTNQITDAS--PLSGLTNL 320
Query: 288 IHLSLRNASLTDVSLHQLSSLS--KLTNLSIRDAVLTNSGLGSFK 330
+L L N + DVSL L++L+ +L+N I D V + SGL + K
Sbjct: 321 TYLDLDNNRINDVSLSDLTNLTDLELSNNQIND-VSSLSGLTNLK 364
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 93/187 (49%), Gaps = 17/187 (9%)
Query: 126 VKVTDAGMKHLLSISTLEK-LWLSETGLTADGIALLSSLQNLSVL---DLGGLPVTDLVL 181
+K+ +A M + I+ LE+ + L L + I+ SSL L+ L +L +TD+
Sbjct: 60 IKLLNADMSSIKDITGLERCINLENLSLRENEISDASSLSGLTGLKRLELSSNQITDV-- 117
Query: 182 RSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFI 241
SL L LE L LW + ++N + L L L W K+ N+SSL L+ +
Sbjct: 118 -SLSGLANLETLSLWDNHITNVSLSGLTNLDTL----LLWGN--KIINVSSLSG--LTNL 168
Query: 242 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 301
+ T+ + + L L +L L+L+ Q++D + LS L++L L + +T+VS
Sbjct: 169 TDLDLSTNQITDASPLSGLTNLTDLDLDNNQITDVS--SLSGLINLMNLDLSSNRITNVS 226
Query: 302 LHQLSSL 308
L L+++
Sbjct: 227 LSGLTNV 233
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 117/248 (47%), Gaps = 47/248 (18%)
Query: 100 CRRVTSSALWALTGMTCLKELDLSRCVKVTDA----GMKHL----LSISTLEKLWLSE-T 150
C ++T + +L+G+T L +LDLS ++TDA G+ +L L + + + LS+ T
Sbjct: 283 CNQITDVS--SLSGLTNLTDLDLSTN-QITDASPLSGLTNLTYLDLDNNRINDVSLSDLT 339
Query: 151 GLT--------ADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
LT + ++ LS L NL LDL + D+ SL LT L L+L ++++N
Sbjct: 340 NLTDLELSNNQINDVSSLSGLTNLKDLDLSNNQINDI--SSLSGLTNLTDLELSSNEITN 397
Query: 203 RGAAVLKMFPR-LSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLN 261
+ R L N V+ L ++SL+ L L A ++L +L
Sbjct: 398 ISSLSSLASLRCLDLDNNQIIDVSSLSALTSLKWLRLCSNHATDA--------SSLSSLV 449
Query: 262 HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS--------------LHQLSS 307
+L L+L Q++D + PLS L L+L + +TDVS +Q++
Sbjct: 450 NLRWLDLSSNQITDVS--PLSGLYNLGWLNLSSNQITDVSPLSGLANLTGLDLSSNQITD 507
Query: 308 LSKLTNLS 315
+S L+NL+
Sbjct: 508 VSPLSNLT 515
>gi|328869082|gb|EGG17460.1| hypothetical protein DFA_08455 [Dictyostelium fasciculatum]
Length = 713
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 125/281 (44%), Gaps = 54/281 (19%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L F YL +++ C VT + + MT L L+L+ +++D +K + ++ L L
Sbjct: 343 LPGFVYLHTISFVGCSNVTDTGMEGFKTMTNLTSLNLT-GTRISDVSLKFIRRLTLLRSL 401
Query: 146 WLSETGLTADGIALLSSLQ------------------------NLSVL------------ 169
L TG+T G+ LLS L NL+ L
Sbjct: 402 SLRNTGITEKGVLLLSPLSKLESLDLTNLLLTDTSMLTVATFSNLNTLLLGNALVTEKGI 461
Query: 170 -DLGGLPVTDLVL--------RSLQVLTK----LEYLDLWGSQVSNRGAAVLKMFPRLSF 216
D+ LP+T L L S+ LTK LE LD+ G+ V G LK F +L
Sbjct: 462 NDISNLPITTLSLLHCKKINNASMVYLTKYQNTLESLDITGTMVMGMGFIHLKRFKKLRD 521
Query: 217 LNLAWTGVTKLPNISSLECLNLSFIQQVG-AETDLVLSLTALQNLNHLERLNLEQTQVSD 275
L L I L+ L FI ++ ++ + S+T++ NL L L+L T++SD
Sbjct: 522 LQLPNRLCITDDTIKHLDSL--EFISKLHLSDYTQITSITSIPNLKRLVDLSLSNTKISD 579
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 316
++ + + L HL+L ++TD + QL+ L +LT LS+
Sbjct: 580 DSIPTILKYLNLEHLNLDRTNVTDFGVSQLAVL-QLTTLSL 619
>gi|290993931|ref|XP_002679586.1| hypothetical protein NAEGRDRAFT_47566 [Naegleria gruberi]
gi|284093203|gb|EFC46842.1| hypothetical protein NAEGRDRAFT_47566 [Naegleria gruberi]
Length = 675
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 145/305 (47%), Gaps = 41/305 (13%)
Query: 60 LEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC--- 116
L N + LRG V+ M+Y+ F L L++ C VT + L+ C
Sbjct: 360 LTYISQNLTHLNLRGCTKVNDSAMSYISQFSQLNYLDMTGCVNVTDLGVKHLSQSACKTK 419
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIA-LLSSLQNLSVLDLGGL 174
LK LDL+ C +VTD G+++L ++ LE L L +TA G+ L++S QN+ VL+L G
Sbjct: 420 LKYLDLTFCHQVTDEGVRYLSEMTELEDLTLQCCRHITAKGLTQLVNSCQNIRVLNLTGC 479
Query: 175 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLE 234
+ ++ L KLE L + G ++++ L++ WT +L+
Sbjct: 480 HLLEISGVRSGSLPKLEKLSMMGCKLTSDNC--LRVISD-------WT--------CNLK 522
Query: 235 CLNLSF---IQQVGAETDLVLSLTALQNLNHLERLNLEQ-TQVSDATL----FPLSTFKE 286
L LSF I G E ++ S +NL+H LNL++ + ++D +L LS E
Sbjct: 523 ELVLSFSDMITDGGIERVIINS----KNLSH---LNLKKCSNITDKSLECISKHLSNVVE 575
Query: 287 LIHLS-LRNASLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGW 344
++L+ +R T+ L L + + L I+ + + N GL SL++LD+
Sbjct: 576 YLNLTGVR--GFTNGGLKYLENCTSLKEFVIQRCIHVNNEGLAHLAYCPSLEILDISENT 633
Query: 345 LLTED 349
L+T D
Sbjct: 634 LITGD 638
>gi|406830574|ref|ZP_11090168.1| hypothetical protein SpalD1_03019 [Schlesneria paludicola DSM
18645]
Length = 404
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 119/269 (44%), Gaps = 47/269 (17%)
Query: 119 ELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTD 178
++D + TDA + L + LE L LS T ++ GIA LS L++L+VL L LPV +
Sbjct: 54 QIDCRDAQEFTDADVTLLKTFPELESLDLSGTQISGKGIAELSVLRSLTVLHLANLPVKN 113
Query: 179 LVLRSLQVLTKLEYLD------------------------LWGSQVSNRGAAVLKMFPRL 214
+ L L L LD L G++++N G L F +L
Sbjct: 114 AQFKKLIELDSLTTLDVADTQVSDAALQGSIAHPNLTTLVLSGNRITNAGLNDLSKFGQL 173
Query: 215 SFLNLAWT-----GVTKLPNISSLECLNLS-------FIQQVGAETDL-VLSLTA----- 256
+ L+L T G+T L + +L L LS ++ +G + L +L LTA
Sbjct: 174 AILDLTQTRVSDEGMTALKRLENLTELRLSGNVITDTGLEAIGGLSHLKILDLTATQITD 233
Query: 257 -----LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L+ LN+L L L + QV D + L LI L +TD L L ++ L
Sbjct: 234 AGLKHLRGLNNLNELKLGRNQVKDNGVNALVEIPTLIALDFYATQITDECLSALGQIANL 293
Query: 312 TNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
T L + +++ GL + R+LK + L
Sbjct: 294 TTLDLGKNPISDFGLRNLTRLRNLKEIGL 322
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 91/204 (44%), Gaps = 26/204 (12%)
Query: 102 RVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLS 161
R+T++ L L+ L LDL++ +V+D GM L + L +L LS +T G+ +
Sbjct: 158 RITNAGLNDLSKFGQLAILDLTQT-RVSDEGMTALKRLENLTELRLSGNVITDTGLEAIG 216
Query: 162 SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW 221
L +L +LDL +TD L+ L+ L L L L +QV + G L P L L+
Sbjct: 217 GLSHLKILDLTATQITDAGLKHLRGLNNLNELKLGRNQVKDNGVNALVEIPTLIALDFYA 276
Query: 222 TGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPL 281
T +T EC L+AL + +L L+L + +SD L L
Sbjct: 277 TQITD-------EC------------------LSALGQIANLTTLDLGKNPISDFGLRNL 311
Query: 282 STFKELIHLSLRNASLTDVSLHQL 305
+ + L + L A +T L +
Sbjct: 312 TRLRNLKEIGLVEAPVTASGLKRF 335
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 70/136 (51%), Gaps = 5/136 (3%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + + +G +L+ L++ ++T + L L G+ L EL L R +V D G+
Sbjct: 205 NVITDTGLEAIGGLSHLKILDLT-ATQITDAGLKHLRGLNNLNELKLGRN-QVKDNGVNA 262
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
L+ I TL L T +T + ++ L + NL+ LDLG P++D LR+L L L+ + L
Sbjct: 263 LVEIPTLIALDFYATQITDECLSALGQIANLTTLDLGKNPISDFGLRNLTRLRNLKEIGL 322
Query: 196 WGSQVSNRGAAVLKMF 211
+ V+ G LK F
Sbjct: 323 VEAPVTASG---LKRF 335
>gi|226534322|gb|ACO71437.1| AT4G23840-like protein [Capsella rubella]
Length = 90
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 40/53 (75%)
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLS 239
LTKLEYLD+WGS V++ GA + F LSFLNL+WT VT+ NI LECL+++
Sbjct: 2 LTKLEYLDIWGSNVTDLGAICILKFSNLSFLNLSWTSVTQTLNIPHLECLHMN 54
>gi|290999671|ref|XP_002682403.1| LRR_RI domain-containing protein [Naegleria gruberi]
gi|284096030|gb|EFC49659.1| LRR_RI domain-containing protein [Naegleria gruberi]
Length = 403
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 99/216 (45%), Gaps = 11/216 (5%)
Query: 125 CVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL 184
C +V + G K++ + L L + E + A+G LS L L+ LD+ + D + +
Sbjct: 189 CNRVGNEGSKYISELKQLTTLSIDENDIGAEGAKYLSELTQLTCLDISSNWLGDEGAKYV 248
Query: 185 QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLS 239
+ +L L + +++ N G+ + +L L++ G+ ++ L+ L+LS
Sbjct: 249 SKMKQLTTLHINSNRIGNEGSKFISSLNQLKNLDICKNDIGDEGLEYFGQLAQLKSLDLS 308
Query: 240 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 299
+ ++G E LS L L L+++ + D P+ K+LI+L + N + +
Sbjct: 309 Y-NRIGDEGAQYLS-----ELKQLIYLDIKTNHLGDKGAMPIGELKKLIYLYINNNKIRN 362
Query: 300 VSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSL 335
+S L +LT L IR+ +T G F + L
Sbjct: 363 EGAKYISELKQLTKLDIRNNFITEEGTKYFTEMKQL 398
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 136/321 (42%), Gaps = 51/321 (15%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
R+L+++ +T L M L +L + RC + G+K++ + L KL +
Sbjct: 85 RFLQNIATLKVGVITRDTYRKLILMKSLTKL-IIRCDD--EEGVKYISELKQLTKLTIYG 141
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
+ + +G+ +S L+ L+ L + +++ + L+ L +L L ++ ++V N G+ +
Sbjct: 142 SHIGDEGVRYISELKQLTYLSIPSNGISEYGAKHLRELKQLTTLIIFCNRVGNEGSKYIS 201
Query: 210 MFPRLSFL-----NLAWTGVTKLPNISSLECLNLS----------FIQQ----------- 243
+L+ L ++ G L ++ L CL++S ++ +
Sbjct: 202 ELKQLTTLSIDENDIGAEGAKYLSELTQLTCLDISSNWLGDEGAKYVSKMKQLTTLHINS 261
Query: 244 --VGAE-TDLVLSLTALQNLN------------------HLERLNLEQTQVSDATLFPLS 282
+G E + + SL L+NL+ L+ L+L ++ D LS
Sbjct: 262 NRIGNEGSKFISSLNQLKNLDICKNDIGDEGLEYFGQLAQLKSLDLSYNRIGDEGAQYLS 321
Query: 283 TFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 342
K+LI+L ++ L D + L KL L I + + N G + L LD+
Sbjct: 322 ELKQLIYLDIKTNHLGDKGAMPIGELKKLIYLYINNNKIRNEGAKYISELKQLTKLDIRN 381
Query: 343 GWLLTEDAILQFCKMHPRIEV 363
+ +TE+ F +M I++
Sbjct: 382 NF-ITEEGTKYFTEMKQLIDL 401
>gi|407424780|gb|EKF39143.1| hypothetical protein MOQ_000636 [Trypanosoma cruzi marinkellei]
Length = 936
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 128/262 (48%), Gaps = 32/262 (12%)
Query: 100 CRRVTSSALWALTGMTC-----------LKELDLSRCVKVTDAGMKHLLSISTLEKL-WL 147
CR V +L + ++C L++LDLS +VT+ GM +S L+KL L
Sbjct: 347 CRHVEQLSLCMSSSVSCTRFLRHRSLCALRDLDLSY-TQVTEEGMHR--DVSRLKKLSRL 403
Query: 148 SETGL-TADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGA 205
S G +G+ L +L L LDLG VTD L +L+ +L LDL W ++++
Sbjct: 404 SLEGCRKIEGLQWLRALTQLRELDLGYSSVTDDSLTALRFCPELVRLDLQWCGRITSLKC 463
Query: 206 AVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSFIQQVGAETDLVLSLTALQNL 260
V + L LNL T VT L + ++LE ++L + GA +D+ L NL
Sbjct: 464 LVGALCDSLRELNLTETSVTDEGLVPLKDFAALEWISL---EGCGAVSDV----NVLCNL 516
Query: 261 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDA 319
L +++ +T+V++ + LS + L + +R LTD S L +L +L + + D
Sbjct: 517 TRLREVDVGRTRVTNGGVLSLSQCQALRAMRMRQCYRLTDASF--LGALQQLEEVDLSDC 574
Query: 320 VLTNSGLGSFKPPRSLKLLDLH 341
+TN G+ + RSL+ L L
Sbjct: 575 PVTNEGIAALCGARSLRKLQLQ 596
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 29/217 (13%)
Query: 138 SISTLEKLWLSETGLTADGIAL-LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLW 196
S+ L L LS T +T +G+ +S L+ LS L L G + L+ L+ LT+L LDL
Sbjct: 371 SLCALRDLDLSYTQVTEEGMHRDVSRLKKLSRLSLEGCRKIE-GLQWLRALTQLRELDLG 429
Query: 197 GSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTA 256
S V++ L+ P L L+L W G I+SL+CL VGA D
Sbjct: 430 YSSVTDDSLTALRFCPELVRLDLQWCG-----RITSLKCL-------VGALCD------- 470
Query: 257 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN-ASLTDVSLHQLSSLSKLTNLS 315
L LNL +T V+D L PL F L +SL +++DV++ L +L++L +
Sbjct: 471 -----SLRELNLTETSVTDEGLVPLKDFAALEWISLEGCGAVSDVNV--LCNLTRLREVD 523
Query: 316 IRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAIL 352
+ +TN G+ S ++L+ + + + LT+ + L
Sbjct: 524 VGRTRVTNGGVLSLSQCQALRAMRMRQCYRLTDASFL 560
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 134/302 (44%), Gaps = 47/302 (15%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
LR ++V RVT+ + +L+ L+ + + +C ++TDA L ++ LE++ LS+
Sbjct: 519 LREVDVGR-TRVTNGGVLSLSQCQALRAMRMRQCYRLTDASF--LGALQQLEEVDLSDCP 575
Query: 152 LTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKM 210
+T +GIA L ++L L L V+D+ L L L LDL + V G+ L
Sbjct: 576 VTNEGIAALCGARSLRKLQLQSCHAVSDVNF--LGGLEHLMLLDLHHTTVDEAGSVGLAQ 633
Query: 211 FPRLSFLNLA---------WTGVTKLPNISSLECLN-------LSFIQQVGA-ETDLVLS 253
P+L+ L + W LP + L+ LSF++ ET LS
Sbjct: 634 CPQLTTLIMHSVLVHSLQHWNAALFLPRLKRLDLSTTKVTSDALSFLRMCPILET---LS 690
Query: 254 LTALQNLNHLERLNLEQTQ------VSDATLFPLSTFKELI---------------HLSL 292
L +N+ HL+ L ++ + ++ P T ++I ++++
Sbjct: 691 LRGCKNITHLDFLIIQTSSGVGVCGIAPHDAEPHDTLVDIIAGKEKNPDDGPSPIENMTI 750
Query: 293 RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAIL 352
+ ++ + + +L L++ D +TN GL + + L+ L L +TE A+L
Sbjct: 751 NDGAIKSTAAAPVVGRHRLRELTLSDTGVTNDGLRALQYCPGLERLRLAHCKNVTEVAVL 810
Query: 353 QF 354
++
Sbjct: 811 RW 812
>gi|384252153|gb|EIE25630.1| hypothetical protein COCSUDRAFT_83637 [Coccomyxa subellipsoidea
C-169]
Length = 433
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 155/343 (45%), Gaps = 25/343 (7%)
Query: 27 WRRQ-RRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAY 85
WR R+++RL A L+H + FP L +F E + + E +A
Sbjct: 40 WREAFGRTVQRLEPQGA---LQHPVCLAERFPELQALFMDGCEGVNMTNEQVTEA----- 91
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
G RYL++L++A CR T L L + L++L LS+C +T + L + S+L L
Sbjct: 92 -GRLRYLKTLSLAGCRACTDKGLAGLAVIEGLQKLSLSKCNALTSRTLDLLQTSSSLISL 150
Query: 146 WLSETGLTAD-GIALL---SSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG-SQV 200
L + D +ALL +SL+ LS+ D + +T+ ++S+ L +E L+L G ++
Sbjct: 151 DLGQCAWVDDSSMALLCNSASLKQLSLADC--VRLTNRGVQSVAKLKCIEALNLSGLREI 208
Query: 201 SNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLN-LSFIQQVGAETDLVLSLTALQN 259
+ G L L LNL G + ++ L L+ LS D SL L
Sbjct: 209 DDAGVEALAAVTSLRELNLDRCGQVRGLTLAKLGGLHKLSMCDCPCIADD---SLGCLSG 265
Query: 260 LNHLERLNLEQT-QVSDATLFPLSTFKELIHLSLRNASLTDV-SLHQLSSLSKLTNLSIR 317
+ LE L L+ +++D L++ L L L D ++ +LS+L +L +L +
Sbjct: 266 VTSLEDLKLDMCDKITDKGAGALASMSALEDLDLHRCERLDCEAMRRLSALGQLRSLRLS 325
Query: 318 DAVLTNS-GLGSF-KPPRSLKLLDLHGGWLLTEDAILQFCKMH 358
V + GLG + L LDL G + ++ + +M
Sbjct: 326 GCVYIKAEGLGHLARGCPLLSRLDLAGCVGIKDEGMQALAEMQ 368
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 121/261 (46%), Gaps = 41/261 (15%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
VD MA L L+ L++ADC R+T+ + ++ + C++ L+LS ++ DAG++ L
Sbjct: 158 VDDSSMALLCNSASLKQLSLADCVRLTNRGVQSVAKLKCIEALNLSGLREIDDAGVEALA 217
Query: 138 SISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDL 195
++++L +L L G + +A L L LS+ D P + D L L +T LE L L
Sbjct: 218 AVTSLRELNLDRCGQVRGLTLAKLGGLHKLSMCD---CPCIADDSLGCLSGVTSLEDLKL 274
Query: 196 -WGSQVSNRGAAVLKMFPRLSFLN------LAWTGVTKLPNISSLECLNLSFIQQVGAET 248
+++++GA L L L+ L + +L + L L LS + AE
Sbjct: 275 DMCDKITDKGAGALASMSALEDLDLHRCERLDCEAMRRLSALGQLRSLRLSGCVYIKAEG 334
Query: 249 --------------DLVL-------SLTALQNLNHLERLNLEQTQ-VSDATLFPLSTFKE 286
DL + AL + HL+ LN+ Q + VSDA L+T
Sbjct: 335 LGHLARGCPLLSRLDLAGCVGIKDEGMQALAEMQHLQALNINQCKYVSDAGAAVLAT--- 391
Query: 287 LIHLSLRNASL--TDVSLHQL 305
+S+R+ + T++S H L
Sbjct: 392 --SVSIRDVFVLTTNISQHGL 410
>gi|325108218|ref|YP_004269286.1| hypothetical protein Plabr_1653 [Planctomyces brasiliensis DSM
5305]
gi|324968486|gb|ADY59264.1| hypothetical protein Plabr_1653 [Planctomyces brasiliensis DSM
5305]
Length = 1046
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 96/187 (51%), Gaps = 7/187 (3%)
Query: 41 LADSL-LRH--LIRRRLIFPSLLEVFKHNAEAIEL--RGENSVDAEWMAYLGAFRYLRSL 95
LAD+ LRH L +L SL + + AE IEL RG + E + L LR L
Sbjct: 350 LADTQQLRHIRLTGNQLTEASLRHLSRCQAEIIELTGRGLKHIPNEIFSQLAKSETLRDL 409
Query: 96 NVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTAD 155
+ D +T L AL+ +T L+ L + ++T AG+K L S+ L+++ L T +
Sbjct: 410 RLWDTA-LTDDNLQALSSLTSLRVL-CADGHQLTPAGLKQLASMPFLQEIRLPGANWTDE 467
Query: 156 GIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLS 215
IALL L++L +DL +T+ L L +T LE++DL G+ ++N+G A L L
Sbjct: 468 TIALLQPLKSLRRIDLADSAITNAGLAELANITSLEWIDLQGTDITNQGVAALAALNDLQ 527
Query: 216 FLNLAWT 222
L L T
Sbjct: 528 RLELRGT 534
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 95/199 (47%), Gaps = 25/199 (12%)
Query: 122 LSRC----VKVTDAGMKH--------LLSISTLEKLWLSETGLTADGIALLSSLQNLSVL 169
LSRC +++T G+KH L TL L L +T LT D + LSSL +L VL
Sbjct: 374 LSRCQAEIIELTGRGLKHIPNEIFSQLAKSETLRDLRLWDTALTDDNLQALSSLTSLRVL 433
Query: 170 DLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT---- 225
G +T L+ L + L+ + L G+ ++ A+L+ L ++LA + +T
Sbjct: 434 CADGHQLTPAGLKQLASMPFLQEIRLPGANWTDETIALLQPLKSLRRIDLADSAITNAGL 493
Query: 226 -KLPNISSLECLNLSFIQQVGAETDLV-LSLTALQNLNHLERLNLEQTQVSDATLFPLST 283
+L NI+SLE ++L TD+ + AL LN L+RL L T+ + + LS
Sbjct: 494 AELANITSLEWIDLQ-------GTDITNQGVAALAALNDLQRLELRGTRCNRGSWNTLSK 546
Query: 284 FKELIHLSLRNASLTDVSL 302
I + + A DV +
Sbjct: 547 PFPDIRMRIPPAPGRDVEM 565
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 89/200 (44%), Gaps = 23/200 (11%)
Query: 155 DGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPR- 213
D +ALLS +L + + +TD L +L ++ L G+Q++ A L+ R
Sbjct: 321 DDVALLSDCPSLRRVYIASDAITDRAAELLADTQQLRHIRLTGNQLTE---ASLRHLSRC 377
Query: 214 -LSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAET--DLVL--------SLTALQNLNH 262
+ L G+ +PN F Q +ET DL L +L AL +L
Sbjct: 378 QAEIIELTGRGLKHIPN--------EIFSQLAKSETLRDLRLWDTALTDDNLQALSSLTS 429
Query: 263 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 322
L L + Q++ A L L++ L + L A+ TD ++ L L L + + D+ +T
Sbjct: 430 LRVLCADGHQLTPAGLKQLASMPFLQEIRLPGANWTDETIALLQPLKSLRRIDLADSAIT 489
Query: 323 NSGLGSFKPPRSLKLLDLHG 342
N+GL SL+ +DL G
Sbjct: 490 NAGLAELANITSLEWIDLQG 509
>gi|320168689|gb|EFW45588.1| tyrosine-protein kinase transforming protein Src [Capsaspora
owczarzaki ATCC 30864]
Length = 1510
Score = 66.6 bits (161), Expect = 3e-08, Method: Composition-based stats.
Identities = 66/244 (27%), Positives = 108/244 (44%), Gaps = 10/244 (4%)
Query: 102 RVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLS 161
++TS + ALTG+T L LDLS ++T S++ L L LS + + +
Sbjct: 390 QITSISENALTGLTALTSLDLS-ANQITSISENAFASLTALTVLDLSNNQIASISATAFA 448
Query: 162 SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW 221
L L+ L L T + +L LT L +L + +Q++N A L L+FLN+A
Sbjct: 449 GLTALTGLGLNINQFTSIPTSALTGLTALTFLRIDYNQITNISANALAGLNALTFLNMAN 508
Query: 222 TGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPL 281
+ +P+ S+ L + +G + +A L L L L Q++ +
Sbjct: 509 NQLRSIPS-SAFTSLTALTVLNLGDNQLRSVPSSAFTGLTTLMGLGLHNNQITSISASEF 567
Query: 282 STFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN------SGL--GSFKPPR 333
++ L L L N +T +S + + L+ LT L++ T SGL G + P
Sbjct: 568 TSLTALTQLHLHNNQITSISANAFTGLTALTRLTLDGNPFTTLPPGLFSGLQNGMYLTPS 627
Query: 334 SLKL 337
SL L
Sbjct: 628 SLVL 631
Score = 53.1 bits (126), Expect = 3e-04, Method: Composition-based stats.
Identities = 53/221 (23%), Positives = 88/221 (39%), Gaps = 23/221 (10%)
Query: 145 LWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG 204
L+L +T+ L+ L L+ LDL +T + + LT L LDL +Q+++
Sbjct: 384 LYLQSNQITSISENALTGLTALTSLDLSANQITSISENAFASLTALTVLDLSNNQIASIS 443
Query: 205 AAVLKMFPRLSFLNLAWTGVTKLPN-----ISSLECLNLSFIQQVGAETDLVLSLTALQN 259
A L+ L L T +P +++L L + + Q + + L AL
Sbjct: 444 ATAFAGLTALTGLGLNINQFTSIPTSALTGLTALTFLRIDYNQITNISANALAGLNALTF 503
Query: 260 LNH------------------LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 301
LN L LNL Q+ + L+ L L N +T +S
Sbjct: 504 LNMANNQLRSIPSSAFTSLTALTVLNLGDNQLRSVPSSAFTGLTTLMGLGLHNNQITSIS 563
Query: 302 LHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 342
+ +SL+ LT L + + +T+ +F +L L L G
Sbjct: 564 ASEFTSLTALTQLHLHNNQITSISANAFTGLTALTRLTLDG 604
Score = 48.9 bits (115), Expect = 0.006, Method: Composition-based stats.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 11/208 (5%)
Query: 127 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 186
++T L ++ L L+L +T+ + L L+ LDL + +
Sbjct: 773 QITSISANALTGLTALTWLYLQSNQITSISANAFTGLAALNRLDLSSNQIASISANVFAG 832
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLP-----NISSLECLNLSFI 241
L+ L + L G+Q ++ + L P L ++L+ +T +P +++L +NL+
Sbjct: 833 LSALTGVVLSGNQFTSMPTSALAGLPMLKSVSLSNNQITSIPATAFAGLTALIGVNLAGN 892
Query: 242 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 301
Q T LTAL +L L Q++ + + L L L N +T +S
Sbjct: 893 QLRSIPTSAFTGLTALI------QLVLPNNQITSISANAFAGLSALTLLHLYNNQITSIS 946
Query: 302 LHQLSSLSKLTNLSIRDAVLTNSGLGSF 329
+ S L+ +T L++ D LT G F
Sbjct: 947 ANAFSGLTAMTALALNDNPLTTLPPGLF 974
>gi|329906145|ref|ZP_08274368.1| hypothetical protein IMCC9480_2835 [Oxalobacteraceae bacterium
IMCC9480]
gi|327547327|gb|EGF32161.1| hypothetical protein IMCC9480_2835 [Oxalobacteraceae bacterium
IMCC9480]
Length = 518
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 144/323 (44%), Gaps = 20/323 (6%)
Query: 46 LRHLIRRRL--IFPSLLEVFKHNA--EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCR 101
LRHL +R I P+ LE + A + +E+ ++ + +A L LR L++
Sbjct: 116 LRHLTLQRCQGITPAALEAVANQANLQHLEISLRRNMTDDELASLRPLLQLRHLSLNGSS 175
Query: 102 RVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALL 160
+ S L M L+ LDL+ C + +A + HL + L++L LS LT G+A L
Sbjct: 176 GFSGSGLEDWPQMPALQVLDLTACTTIAEANLVHLAKLPDLQQLNLSSCQQLTDAGVAHL 235
Query: 161 SSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL 219
L LDL G VTD LR L L L++LD+ ++ A L F + LN
Sbjct: 236 PLASTLQHLDLSGCQQVTDAGLRGLSALRSLQHLDVHSCRLVT--GATLGDFAVMKSLNA 293
Query: 220 AW------TGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQV 273
+ G+ + + L+ L ++ V D + T L L L+ LN T +
Sbjct: 294 GFCRRFSDAGLAAVAGMHDLQQLEITHC--VALTRDAL--ATCLPQLTQLQTLNASGTPL 349
Query: 274 SDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDA-VLTNSGLGSFKP 331
SDA L L L L L++ +LT+ L QL++ L +L +R + L +
Sbjct: 350 SDAPLQALFAQGSLQQLVLQHCRALTEPGLAQLATSPALVSLDLRSCRGVVGDALPALGR 409
Query: 332 PRSLKLLDLHGGWLLTEDAILQF 354
+L+ LDL +T D + F
Sbjct: 410 QTALETLDLSRCSGVTGDDLRHF 432
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Query: 82 WMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIST 141
+A L L SL++ CR V AL AL T L+ LDLSRC VT ++H S+S
Sbjct: 378 GLAQLATSPALVSLDLRSCRGVVGDALPALGRQTALETLDLSRCSGVTGDDLRHFQSLSK 437
Query: 142 LEKLWLSETGLTAD-GIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDL 195
L+ L L G D G+A L +L L LDL +TD LR + LE L +
Sbjct: 438 LQTLRLVGCGRINDAGLAHLQALPALKTLDLTDCGYLTDGALRRIAHFPALEKLHI 493
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 133/312 (42%), Gaps = 63/312 (20%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ ++L ++ + +L L+ LN++ C+++T + + L + L+ LDLS C +
Sbjct: 192 QVLDLTACTTIAEANLVHLAKLPDLQQLNLSSCQQLTDAGVAHLPLASTLQHLDLSGCQQ 251
Query: 128 VTDAGMKHLLSISTLEKL----------------------------WLSETGLTA----- 154
VTDAG++ L ++ +L+ L S+ GL A
Sbjct: 252 VTDAGLRGLSALRSLQHLDVHSCRLVTGATLGDFAVMKSLNAGFCRRFSDAGLAAVAGMH 311
Query: 155 ---------------DGIA-LLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
D +A L L L L+ G P++D L++L L+ L L
Sbjct: 312 DLQQLEITHCVALTRDALATCLPQLTQLQTLNASGTPLSDAPLQALFAQGSLQQLVLQHC 371
Query: 199 Q-VSNRGAAVLKMFPRLSFLNL-AWTGVT--KLPNI---SSLECLNLSFIQQVGAETDLV 251
+ ++ G A L P L L+L + GV LP + ++LE L+LS V +
Sbjct: 372 RALTEPGLAQLATSPALVSLDLRSCRGVVGDALPALGRQTALETLDLSRCSGVTGD---- 427
Query: 252 LSLTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLS 309
L Q+L+ L+ L L +++DA L L L L L + LTD +L +++
Sbjct: 428 -DLRHFQSLSKLQTLRLVGCGRINDAGLAHLQALPALKTLDLTDCGYLTDGALRRIAHFP 486
Query: 310 KLTNLSIRDAVL 321
L L IR+ L
Sbjct: 487 ALEKLHIRNCHL 498
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 126/257 (49%), Gaps = 20/257 (7%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
+R L ++ R+T + L L G+ L+ +DL C++VTDAG+ L ++ L L L+E
Sbjct: 44 VRRLELSGNTRLTDAGLAHLAGLLSLEHVDLRSCIQVTDAGLATLAALPALHTLELAEQR 103
Query: 152 LTADGIAL--LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVL 208
A G AL + L++L++ G +T L ++ L++L++ +++ A L
Sbjct: 104 -DASGAALAQMPQLRHLTLQRCQG--ITPAALEAVANQANLQHLEISLRRNMTDDELASL 160
Query: 209 KMFPRLSFLNLAWTGVTKL------PNISSLECLNLSFIQQVGAETDLVLSLTALQNLNH 262
+ +L L+L + P + +L+ L+L+ + AE +LV L L
Sbjct: 161 RPLLQLRHLSLNGSSGFSGSGLEDWPQMPALQVLDLTACTTI-AEANLV----HLAKLPD 215
Query: 263 LERLNLEQT-QVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDA- 319
L++LNL Q++DA + L L HL L +TD L LS+L L +L +
Sbjct: 216 LQQLNLSSCQQLTDAGVAHLPLASTLQHLDLSGCQQVTDAGLRGLSALRSLQHLDVHSCR 275
Query: 320 VLTNSGLGSFKPPRSLK 336
++T + LG F +SL
Sbjct: 276 LVTGATLGDFAVMKSLN 292
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 5/122 (4%)
Query: 52 RRLIFPSLLEVFKHNA-EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWA 110
R L P L ++ A +++LR V + + LG L +L+++ C VT L
Sbjct: 372 RALTEPGLAQLATSPALVSLDLRSCRGVVGDALPALGRQTALETLDLSRCSGVTGDDLRH 431
Query: 111 LTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADG----IALLSSLQNL 166
++ L+ L L C ++ DAG+ HL ++ L+ L L++ G DG IA +L+ L
Sbjct: 432 FQSLSKLQTLRLVGCGRINDAGLAHLQALPALKTLDLTDCGYLTDGALRRIAHFPALEKL 491
Query: 167 SV 168
+
Sbjct: 492 HI 493
>gi|428317664|ref|YP_007115546.1| leucine-rich repeat-containing protein [Oscillatoria nigro-viridis
PCC 7112]
gi|428241344|gb|AFZ07130.1| leucine-rich repeat-containing protein [Oscillatoria nigro-viridis
PCC 7112]
Length = 782
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 101/205 (49%), Gaps = 27/205 (13%)
Query: 131 AGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKL 190
L +++ L L+L G + IA LS+L NL+ L+L +TD+ L LT L
Sbjct: 66 TNFTSLSALTNLTALYLQ--GSQINDIASLSALTNLTYLNLESNQITDIT--PLSALTNL 121
Query: 191 EYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDL 250
YL+L +Q+++ L L+ L+L + +T + +S+L L TDL
Sbjct: 122 TYLNLNHNQITD--ITPLSGLTNLTILSLEYNQITDITGLSALTNL-----------TDL 168
Query: 251 VLS------LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQ 304
L +T L L +L R++L +++D T PLS L L + N +TD+S
Sbjct: 169 CLGCNQITDITGLLGLTNLTRVSLNNNEITDVT--PLSALTNLTKLGIENQEITDIS--P 224
Query: 305 LSSLSKLTNLSIRDAVLTNSGLGSF 329
LS+L+ LT LSI D ++ S L +
Sbjct: 225 LSALTNLTELSISDGIIDISPLSAL 249
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 113/230 (49%), Gaps = 28/230 (12%)
Query: 111 LTGMTCLKEL-DLS-RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSV 168
+TG++ L L DL C ++TD + LL ++ L ++ L+ +T + LS+L NL+
Sbjct: 156 ITGLSALTNLTDLCLGCNQITD--ITGLLGLTNLTRVSLNNNEIT--DVTPLSALTNLTK 211
Query: 169 LDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLP 228
L + +TD+ L LT L L + + + L L F++ T ++ L
Sbjct: 212 LGIENQEITDI--SPLSALTNLTELSISDGIIDISPLSALTNLTEL-FISEGITDISPLS 268
Query: 229 NISSLECLNLSF------IQQVGAETDL---------VLSLTALQNLNHLERLNLEQTQV 273
+++L L++ + I + A T+L + +TAL L +L L L Q+
Sbjct: 269 ALTNLTKLSIIYNDTITEISPLSALTNLTSLYFLYTQITDITALSALTNLTYLYLSDNQI 328
Query: 274 SDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
+D T LS L +L+L N +TD++ LS+L+ LT L++ + +T+
Sbjct: 329 TDIT--ALSALTNLTYLNLSNNQITDIA--ALSALTNLTYLNLSNNQITD 374
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 106/219 (48%), Gaps = 24/219 (10%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L A L L + + S L ALT +T EL +S + + L +++ L +L
Sbjct: 203 LSALTNLTKLGIENQEITDISPLSALTNLT---ELSISDGI----IDISPLSALTNLTEL 255
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLV--LRSLQVLTKLEYLDLWGSQVSNR 203
++SE G+T I+ LS+L NL+ L + D + + L LT L L +Q+++
Sbjct: 256 FISE-GIT--DISPLSALTNLTKL---SIIYNDTITEISPLSALTNLTSLYFLYTQITDI 309
Query: 204 GAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHL 263
A L L++L L+ +T + +S+L NL+++ + + +L+AL NL +L
Sbjct: 310 TA--LSALTNLTYLYLSDNQITDITALSALT--NLTYLNLSNNQITDIAALSALTNLTYL 365
Query: 264 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 302
NL Q++D T LS L L L +TD++L
Sbjct: 366 ---NLSNNQITDIT--ALSALTNLTELHLETNQITDLNL 399
>gi|414076287|ref|YP_006995605.1| hypothetical protein ANA_C11003 [Anabaena sp. 90]
gi|413969703|gb|AFW93792.1| leucine-rich repeat-containing protein [Anabaena sp. 90]
Length = 474
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 117/226 (51%), Gaps = 23/226 (10%)
Query: 106 SALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQN 165
S + L+ +T L L LS+ K++D +K L +++ L L LS+ ++ I LS+L
Sbjct: 98 SDIKPLSNLTKLTSLGLSKN-KISD--IKSLSNLTKLTSLGLSKNKIS--DIKSLSNLTK 152
Query: 166 LSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 225
L+ LDL G ++D L LTKL LDLWG+Q+S+ L L+FLNL ++
Sbjct: 153 LTKLDLVGNQISDTT--PLSNLTKLTSLDLWGNQISD--IKPLSNLTNLTFLNLVGNKIS 208
Query: 226 KLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFK 285
+ +S NL+ + +G + + + +L N +L +L+L Q+SD T PLS
Sbjct: 209 DIKPLS-----NLTKLTSLGLSKNKISDIKSLSNFTNLTKLDLVGNQISDTT--PLSNLT 261
Query: 286 ELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP 331
+L L L ++D+ LS LTNL+ +L + + + KP
Sbjct: 262 KLTSLDLWGNQISDI-----KPLSNLTNLTF--LILWGNQISNIKP 300
Score = 38.5 bits (88), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 86/177 (48%), Gaps = 27/177 (15%)
Query: 156 GIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN------------- 202
I LS+L NL+ L L ++D+ + L LT L YLDLWG+++S+
Sbjct: 297 NIKPLSNLTNLTSLTLSLNQISDI--KPLSNLTNLTYLDLWGNKISDIKPLSNLTNLTYL 354
Query: 203 ----RGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL-NLSFIQQVGAETDLVLSLTAL 257
+ +K L+ L L + + ++ +I L L NL+F+ + + + L
Sbjct: 355 YLLSNKISDIKPLSNLTNLTLLFLSLNQISDIKPLSSLTNLTFLILSKNQ---ISDIKPL 411
Query: 258 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 314
NL +L L L + ++SD + PLS L +LSL ++D+ LS+L+ LT L
Sbjct: 412 SNLTNLTSLGLSENKISD--IKPLSNLTNLTYLSLWENPISDI--KPLSNLTNLTEL 464
Score = 38.1 bits (87), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 68/136 (50%), Gaps = 14/136 (10%)
Query: 185 QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQV 244
Q+LT L L L +++S+ L +L+ L L+ K+ +I SL NL+ + +
Sbjct: 82 QILTNLTSLGLSENKISD--IKPLSNLTKLTSLGLS---KNKISDIKSLS--NLTKLTSL 134
Query: 245 GAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQ 304
G + + + +L NL L +L+L Q+SD T PLS +L L L ++D+
Sbjct: 135 GLSKNKISDIKSLSNLTKLTKLDLVGNQISDTT--PLSNLTKLTSLDLWGNQISDI---- 188
Query: 305 LSSLSKLTNLSIRDAV 320
LS LTNL+ + V
Sbjct: 189 -KPLSNLTNLTFLNLV 203
>gi|290991306|ref|XP_002678276.1| predicted protein [Naegleria gruberi]
gi|284091888|gb|EFC45532.1| predicted protein [Naegleria gruberi]
Length = 445
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 129/280 (46%), Gaps = 13/280 (4%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
NS+ + + + + L SLN+ + + + + + M L LD+S ++ D G K
Sbjct: 159 NSIGDKGVKPISKMKQLTSLNIYNNEIGVAGSKFIIE-MKQLTSLDISYN-EIGDEGAKS 216
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ + L L +S + +GI L+S ++ L++LD+ G + D ++ + + +L L++
Sbjct: 217 ISELKQLTSLTVSGNQIGDEGIKLISEMKQLTLLDISGNSIGDKGVKPISKMKQLTSLNI 276
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSFIQQVGAETDL 250
+ +++ G+ + +L+ L++++ G + + L L +S Q+G E
Sbjct: 277 YNNEIGVAGSKFIIEMKQLTSLDISYNEIGDEGAKSISEMKQLTSLTISG-NQIGDE--- 332
Query: 251 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 310
+ + + L L++ V D + +S K+L L++ + +S + +
Sbjct: 333 --GIKLISEMKQLTLLDISGKSVGDKGVKSISKMKQLTSLTIYTNEIGVAGAKFISEMKQ 390
Query: 311 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 350
LT+L I + + G S + L LLD+ G + E +
Sbjct: 391 LTSLDISYNEIGDEGAKSISELKQLTLLDISGNGIGDEGS 430
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/258 (19%), Positives = 116/258 (44%), Gaps = 36/258 (13%)
Query: 114 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 173
M L L++S ++ D K ++ + L L + + +GI L+S ++ L++LD+ G
Sbjct: 100 MKQLTSLNISNN-QINDETAKSIIEMKRLTSLDIGGNQIGDEGIKLISEMKQLTLLDISG 158
Query: 174 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLP 228
+ D ++ + + +L L+++ +++ G+ + +L+ L++++ G +
Sbjct: 159 NSIGDKGVKPISKMKQLTSLNIYNNEIGVAGSKFIIEMKQLTSLDISYNEIGDEGAKSIS 218
Query: 229 NISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELI 288
+ L L +S Q+G E + + + L L++ + D + P+S K+L
Sbjct: 219 ELKQLTSLTVSG-NQIGDE-----GIKLISEMKQLTLLDISGNSIGDKGVKPISKMKQLT 272
Query: 289 HLSLRNASLT----------------DVSLHQ--------LSSLSKLTNLSIRDAVLTNS 324
L++ N + D+S ++ +S + +LT+L+I + +
Sbjct: 273 SLNIYNNEIGVAGSKFIIEMKQLTSLDISYNEIGDEGAKSISEMKQLTSLTISGNQIGDE 332
Query: 325 GLGSFKPPRSLKLLDLHG 342
G+ + L LLD+ G
Sbjct: 333 GIKLISEMKQLTLLDISG 350
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 98/223 (43%), Gaps = 18/223 (8%)
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN---- 218
++ L+ LD+GG + D ++ + + +L LD+ G+ + ++G + +L+ LN
Sbjct: 124 MKRLTSLDIGGNQIGDEGIKLISEMKQLTLLDISGNSIGDKGVKPISKMKQLTSLNIYNN 183
Query: 219 -LAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDAT 277
+ G + + L L++S+ ++G E ++ L L L + Q+ D
Sbjct: 184 EIGVAGSKFIIEMKQLTSLDISY-NEIGDE-----GAKSISELKQLTSLTVSGNQIGDEG 237
Query: 278 LFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKL 337
+ +S K+L L + S+ D + +S + +LT+L+I + + +G + L
Sbjct: 238 IKLISEMKQLTLLDISGNSIGDKGVKPISKMKQLTSLNIYNNEIGVAGSKFIIEMKQLTS 297
Query: 338 LDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNG 380
LD+ + E A E+ S+ +QIG G
Sbjct: 298 LDISYNEIGDEGA-------KSISEMKQLTSLTISGNQIGDEG 333
>gi|332661885|ref|YP_004451355.1| small GTP-binding protein [Haliscomenobacter hydrossis DSM 1100]
gi|332337382|gb|AEE54482.1| small GTP-binding protein [Haliscomenobacter hydrossis DSM 1100]
Length = 1141
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 114/219 (52%), Gaps = 23/219 (10%)
Query: 101 RRVTSSALWALTGMTCLKELDLSRCVKVTD-AGMKHLLSISTLEKLWLSETGLTADGIAL 159
R SS L +L + L +L LS +V+D + + HL ++S+L + + L+A
Sbjct: 232 RDTYSSDLRSLRPLINLSDLKLS-STEVSDLSVLAHLHNLSSLHLSYTQVSDLSA----- 285
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL 219
LS+L NLS LDL V+D L +L L L +L+L +Q+S+ A L+ LS ++L
Sbjct: 286 LSALSNLSFLDLSDTQVSD--LSALSALYNLSFLNLSNTQISDLSA--LRHLLNLSIIDL 341
Query: 220 AWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLF 279
+ T +T L + L+ LN + + A L+AL NL++L L L TQ SD
Sbjct: 342 SSTELTDLTTLRHLQNLNSINLNKTHAS-----DLSALSNLSNLSELYLSDTQASD---- 392
Query: 280 PLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 318
LS L +L+ N S T VS LS+L+ L NLS D
Sbjct: 393 -LSALSALFNLNSLNLSYTQVS--GLSALANLQNLSSLD 428
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 106/215 (49%), Gaps = 27/215 (12%)
Query: 131 AGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKL 190
+ ++ L + L L LS T ++ +++L+ L NLS L L V+DL +L L+ L
Sbjct: 237 SDLRSLRPLINLSDLKLSSTEVS--DLSVLAHLHNLSSLHLSYTQVSDL--SALSALSNL 292
Query: 191 EYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDL 250
+LDL +QVS+ A L LSFLNL+ T ++ L + L LNLS I E
Sbjct: 293 SFLDLSDTQVSDLSA--LSALYNLSFLNLSNTQISDLSALRHL--LNLSIIDLSSTE--- 345
Query: 251 VLSLTALQNLNHLERL---NLEQTQVSD-ATLFPLSTFKELIHLSLRNASLTDVSLHQLS 306
LT L L HL+ L NL +T SD + L LS EL L+D LS
Sbjct: 346 ---LTDLTTLRHLQNLNSINLNKTHASDLSALSNLSNLSELY--------LSDTQASDLS 394
Query: 307 SLSKLTNLSIRDAVLTN-SGLGSFKPPRSLKLLDL 340
+LS L NL+ + T SGL + ++L LDL
Sbjct: 395 ALSALFNLNSLNLSYTQVSGLSALANLQNLSSLDL 429
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 74/143 (51%), Gaps = 9/143 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L R+L++LN + + +S L AL+ ++ L EL LS + + L ++++L
Sbjct: 349 LTTLRHLQNLNSINLNKTHASDLSALSNLSNLSELYLSDTQASDLSALSALFNLNSLNLS 408
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+ +GL+A L++LQNLS LDLG V D L L L L LDL ++V +
Sbjct: 409 YTQVSGLSA-----LANLQNLSSLDLGDTEVFD--LSPLANLQNLSSLDLSDTEVVDLSP 461
Query: 206 AVLKMFPRLSFLNLAWTGVTKLP 228
+ +L +LNL+ T + LP
Sbjct: 462 MI--NLSKLKYLNLSSTPILHLP 482
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 120/249 (48%), Gaps = 32/249 (12%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTD-AGMKHLLSISTLEK 144
L A L +L+ D S L AL+ + L L+LS +++D + ++HLL++S ++
Sbjct: 283 LSALSALSNLSFLDLSDTQVSDLSALSALYNLSFLNLSNT-QISDLSALRHLLNLSIID- 340
Query: 145 LWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG 204
LS T LT + L LQNL+ ++L +DL +L L+ L L L +Q S+
Sbjct: 341 --LSSTELT--DLTTLRHLQNLNSINLNKTHASDL--SALSNLSNLSELYLSDTQASDLS 394
Query: 205 AAVLKMFPRLSFLNLAWTGVT------KLPNISSL-----ECLNLSFIQQVGAETDL--- 250
A L L+ LNL++T V+ L N+SSL E +LS + + + L
Sbjct: 395 A--LSALFNLNSLNLSYTQVSGLSALANLQNLSSLDLGDTEVFDLSPLANLQNLSSLDLS 452
Query: 251 ---VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS---LHQ 304
V+ L+ + NL+ L+ LNL T + F L +L L LR+ ++ H+
Sbjct: 453 DTEVVDLSPMINLSKLKYLNLSSTPILHLP-FELLFLPKLTKLDLRDTHCLNIPPELTHE 511
Query: 305 LSSLSKLTN 313
++L L N
Sbjct: 512 RNALPALRN 520
>gi|149175664|ref|ZP_01854283.1| hypothetical protein PM8797T_31103 [Planctomyces maris DSM 8797]
gi|148845383|gb|EDL59727.1| hypothetical protein PM8797T_31103 [Planctomyces maris DSM 8797]
Length = 660
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 121/254 (47%), Gaps = 13/254 (5%)
Query: 80 AEWMAYLGAFRYLRSLN--VADCRRVTSSALWALTGMTCLKELDLSRCVKVTDA-GMKHL 136
A+ +A +G L +LN V RV + L + L+EL L C ++ G+ L
Sbjct: 399 ADGLAAIGDVSSLETLNLKVYCPERVDAHFFDPLRHLKSLRELTLE-CRQLKGGEGLSSL 457
Query: 137 LSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLW 196
+ LE L L +T L + I +++ +L L L VTD + SL L +LE L+L
Sbjct: 458 SQLPELEALHLLQTKLQDEDIRWIANCNSLKALTLNSYEVTDQGVSSLGSLKQLESLNLD 517
Query: 197 GSQVSNRGAAVLKMFPRLSFLNLAWTGVTK--LPNISSLECLNLSFIQQVGAETDLVLSL 254
++ G L+ RL+ ++L TGVT +P +SSL S ++++ E V S
Sbjct: 518 RCRLDGSGLVSLQQLHRLTDVSLNHTGVTDAVIPFLSSL-----SQLKRLTLENGRVSSA 572
Query: 255 T--ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 312
T +L++L L LNL VSD L+ L L+L ++++ L L + L
Sbjct: 573 TLESLKDLKKLSELNLTNCPVSDEICELLTQMSALRTLNLNKTKVSNIGLEGLQKATGLE 632
Query: 313 NLSIRDAVLTNSGL 326
LS+R +T G+
Sbjct: 633 TLSLRRTKVTRQGV 646
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 131/274 (47%), Gaps = 16/274 (5%)
Query: 77 SVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDL-SRCVKVTDAGMKH 135
+D + +A LG+ LR L+++ + AL+ L + L+EL + S ++T+ G+++
Sbjct: 321 GLDEDDVATLGSLTQLRELDLSGNSSLNDVALFHLRNLNQLEELKVASYYNRITEKGLQY 380
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL---PVTDLVLRSLQVLTKLEY 192
L L+ L L L ADG+A + + +L L+L V L+ L L
Sbjct: 381 LRQPRKLKTLDLIGCMLKADGLAAIGDVSSLETLNLKVYCPERVDAHFFDPLRHLKSLRE 440
Query: 193 LDLWGSQV-SNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSFIQQVGA 246
L L Q+ G + L P L L+L T + + N +SL+ L L+ +
Sbjct: 441 LTLECRQLKGGEGLSSLSQLPELEALHLLQTKLQDEDIRWIANCNSLKALTLNSYEVTDQ 500
Query: 247 ETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLS 306
+++L +L LE LNL++ ++ + L L L +SL + +TD + LS
Sbjct: 501 ------GVSSLGSLKQLESLNLDRCRLDGSGLVSLQQLHRLTDVSLNHTGVTDAVIPFLS 554
Query: 307 SLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
SLS+L L++ + ++++ L S K + L L+L
Sbjct: 555 SLSQLKRLTLENGRVSSATLESLKDLKKLSELNL 588
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 80/149 (53%), Gaps = 2/149 (1%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
V + ++ LG+ + L SLN+ CR + S L +L + L ++ L+ VTDA + L
Sbjct: 497 VTDQGVSSLGSLKQLESLNLDRCR-LDGSGLVSLQQLHRLTDVSLNH-TGVTDAVIPFLS 554
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
S+S L++L L +++ + L L+ LS L+L PV+D + L ++ L L+L
Sbjct: 555 SLSQLKRLTLENGRVSSATLESLKDLKKLSELNLTNCPVSDEICELLTQMSALRTLNLNK 614
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWTGVTK 226
++VSN G L+ L L+L T VT+
Sbjct: 615 TKVSNIGLEGLQKATGLETLSLRRTKVTR 643
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 119/274 (43%), Gaps = 43/274 (15%)
Query: 35 ERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRS 94
ER+ AH D L RHL SL E+ E +L+G E ++ L L +
Sbjct: 422 ERVDAHFFDPL-RHL-------KSLREL---TLECRQLKG-----GEGLSSLSQLPELEA 465
Query: 95 LNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTA 154
L++ + W + LK L L+ +VTD G+ L S+ LE L L L
Sbjct: 466 LHLLQTKLQDEDIRW-IANCNSLKALTLN-SYEVTDQGVSSLGSLKQLESLNLDRCRLDG 523
Query: 155 DGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRL 214
G+ L L L+ + L VTD V+ L L++L+ L L +VS+ LK +L
Sbjct: 524 SGLVSLQQLHRLTDVSLNHTGVTDAVIPFLSSLSQLKRLTLENGRVSSATLESLKDLKKL 583
Query: 215 SFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVS 274
S LNL T P +S C +L+ ++AL+ LN L +T+VS
Sbjct: 584 SELNL-----TNCP-VSDEIC-------------ELLTQMSALRTLN------LNKTKVS 618
Query: 275 DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 308
+ L L L LSLR +T + QL ++
Sbjct: 619 NIGLEGLQKATGLETLSLRRTKVTRQGVQQLRTV 652
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 124/283 (43%), Gaps = 18/283 (6%)
Query: 72 LRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDA 131
LR EN + L FR L L + +C + + L +T L+ELDLS + D
Sbjct: 292 LRLENVHLGRHLNDLSTFRKLEKLALRNCG-LDEDDVATLGSLTQLRELDLSGNSSLNDV 350
Query: 132 GMKHLLSISTLEKLWLSE--TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK 189
+ HL +++ LE+L ++ +T G+ L + L LDL G + L ++ ++
Sbjct: 351 ALFHLRNLNQLEELKVASYYNRITEKGLQYLRQPRKLKTLDLIGCMLKADGLAAIGDVSS 410
Query: 190 LEYLDL---WGSQVSNRGAAVLKMFPRLSFLNL------AWTGVTKLPNISSLECLNLSF 240
LE L+L +V L+ L L L G++ L + LE L+L
Sbjct: 411 LETLNLKVYCPERVDAHFFDPLRHLKSLRELTLECRQLKGGEGLSSLSQLPELEALHL-- 468
Query: 241 IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 300
+Q + D+ + N N L+ L L +V+D + L + K+L L+L L
Sbjct: 469 LQTKLQDEDI----RWIANCNSLKALTLNSYEVTDQGVSSLGSLKQLESLNLDRCRLDGS 524
Query: 301 SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGG 343
L L L +LT++S+ +T++ + LK L L G
Sbjct: 525 GLVSLQQLHRLTDVSLNHTGVTDAVIPFLSSLSQLKRLTLENG 567
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 68/170 (40%), Gaps = 12/170 (7%)
Query: 211 FPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 270
+P S + LA T+L + L L L + G L LE L L
Sbjct: 220 YPSKSEVRLAEIDFTQLRGLDGLRSLTLEGVNLYGRAEGLGF-------FPRLEALTLIN 272
Query: 271 TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 330
T +SD ++TF +L L L N L L+ LS+ KL L++R+ L + +
Sbjct: 273 TNISDQDRGRITTFTQLKTLRLENVHLGR-HLNDLSTFRKLEKLALRNCGLDEDDVATLG 331
Query: 331 PPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNG 380
L+ LDL G L + A+ ++ EL V ++I G
Sbjct: 332 SLTQLRELDLSGNSSLNDVALFHLRNLNQ----LEELKVASYYNRITEKG 377
>gi|401420706|ref|XP_003874842.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322491078|emb|CBZ26343.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 1207
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 124/259 (47%), Gaps = 26/259 (10%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
M ++G L L++ R++T + L +T L+ L+LS + VTD G L + +L
Sbjct: 542 MQHIGLCDKLVELHLQSLRQLTDIGM--LKDLTALRVLNLSDNL-VTDEGCSALHCLPSL 598
Query: 143 EKLWLSE----TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
++L L+ T L A A + L LDL +TD+ ++ +Q T L YL+L+G
Sbjct: 599 QRLNLASCRCITSLAAAFTASGRWMHRLLSLDLSHTNITDVGVQFVQECTDLRYLNLYGC 658
Query: 199 QVSNRGAAVLKMFP------RLSFLNLAWTGVTKLPNISSLECL-NLSFIQQVGAETDLV 251
+ L++ P L +LNL T VT L C NL F+ G + +
Sbjct: 659 RE-------LRLLPWLQKMISLRWLNLGGTRVTNEETKHYLPCARNLRFLSLSGCSSVRL 711
Query: 252 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSK 310
LS L+HLE LNLE T V+D+ L L ++L +LSL + + DVS L +L
Sbjct: 712 LSFAV--KLHHLEYLNLESTSVADSELSCLCHCRKLRYLSLESCVDIRDVS--PLCALPA 767
Query: 311 LTNLSIRDAVLTNSGLGSF 329
L L+I + S G+
Sbjct: 768 LLELNISLTAVGASAGGAL 786
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 81/167 (48%), Gaps = 33/167 (19%)
Query: 114 MTCLKELDLSRCVKVTD-AGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLG 172
C+ LDL+RC +V +G+++L + L +L L+++ + DG+ ++S+ + L VL L
Sbjct: 1013 FACVSCLDLTRCTEVHYLSGLENLYA---LRELTLTQSSVDNDGVRVVSACETLEVLRLT 1069
Query: 173 GL-PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNIS 231
VTD+ L L KL L + +Q++N+G + L +LN A
Sbjct: 1070 ECRGVTDV--NCLGGLRKLHVLCVARTQLTNQGLEGIGHCLALQYLNCA----------- 1116
Query: 232 SLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATL 278
EC LS + AL +L HL L+LE+T V DA +
Sbjct: 1117 --ECRYLSDVN-------------ALSSLKHLIELHLERTDVVDAGI 1148
>gi|428173313|gb|EKX42216.1| hypothetical protein GUITHDRAFT_74106 [Guillardia theta CCMP2712]
Length = 527
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 154/321 (47%), Gaps = 31/321 (9%)
Query: 33 SLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLG-AFRY 91
SL+ +P + +L L R + S L + +A L + +W+ LG +F
Sbjct: 38 SLDGIPNEMVQALFDSLAYSRRLEKSHLPLLSRICDA-SLFAYPLIADDWLEVLGESFHA 96
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE-T 150
L L++++C VT + L + L+ + L C+++ DA ++ + +S+L L +S T
Sbjct: 97 LTRLDMSNCIHVTDEGISRLRSLQSLRSIKLENCLRLGDATLEVIGELSSLSHLSVSACT 156
Query: 151 GLTADGIALLSSLQNLSVLDLGGLPVTDL-VLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
+ + G++ LS L ++ L+L L D + SL+ LT L L+L + + L+
Sbjct: 157 RMASSGVSCLSQLVRMTDLNLERLTRLDSEGIESLEKLTNLRILNLGWTNADDDSFESLR 216
Query: 210 MFPRLSFLNLAWT-----GVTKLPNISSLECLNLSFIQQVGAETDLV------------- 251
PRL LN+ G+ L +++ LE L + +VGA + LV
Sbjct: 217 SLPRLKRLNVCACPFTEDGLQALCSLTQLESLRMCSC-KVGATSALVELSSLGKLKLLDL 275
Query: 252 --------LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLH 303
+L AL+ L+ L+ L L T+V+D L LS+ +L L+L +T+ L
Sbjct: 276 SQCEHVGDQTLEALRGLSDLKILLLAHTRVTDIGLGYLSSLWDLKTLNLDCCHVTNGGLQ 335
Query: 304 QLSSLSKLTNLSIRDAVLTNS 324
+++L+ L NL + D V+T+S
Sbjct: 336 TIANLTNLENLDLSDNVVTSS 356
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 135/261 (51%), Gaps = 9/261 (3%)
Query: 81 EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
+ + L + L SL + C+ +SAL L+ + LK LDLS+C V D ++ L +S
Sbjct: 234 DGLQALCSLTQLESLRMCSCKVGATSALVELSSLGKLKLLDLSQCEHVGDQTLEALRGLS 293
Query: 141 TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 200
L+ L L+ T +T G+ LSSL +L L+L VT+ L+++ LT LE LDL + V
Sbjct: 294 DLKILLLAHTRVTDIGLGYLSSLWDLKTLNLDCCHVTNGGLQTIANLTNLENLDLSDNVV 353
Query: 201 SNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVL--SLTALQ 258
++ G A+L L LNL TGV+ + + L+ + ++ ++ L+ L +
Sbjct: 354 TSSGLALLTGLTTLKSLNLFSTGVS---DAGVIHVTGLTNLVRLNLDSRLITDSGLACIS 410
Query: 259 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI-R 317
L +L+ L+L +V+ + L L L LTD ++ +L L+++ NL++ +
Sbjct: 411 GLTNLQELDLFGAKVTHHGTIYIGLLTSLTSLELCGGGLTDEAMRELKRLTRMRNLNVSQ 470
Query: 318 DAVLTNSGLGSFKPPRSLKLL 338
+ L+N GSF P + LL
Sbjct: 471 NESLSN---GSFIPMSRMSLL 488
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 117/275 (42%), Gaps = 37/275 (13%)
Query: 100 CRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIAL 159
C R+ SS + L+ + + +L+L R ++ G++ L ++ L L L T D
Sbjct: 155 CTRMASSGVSCLSQLVRMTDLNLERLTRLDSEGIESLEKLTNLRILNLGWTNADDDSFES 214
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAV------------ 207
L SL L L++ P T+ L++L LT+LE L + +V A V
Sbjct: 215 LRSLPRLKRLNVCACPFTEDGLQALCSLTQLESLRMCSCKVGATSALVELSSLGKLKLLD 274
Query: 208 --------------LKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSFIQQVGAET 248
L+ L L LA T VT L ++ L+ LNL
Sbjct: 275 LSQCEHVGDQTLEALRGLSDLKILLLAHTRVTDIGLGYLSSLWDLKTLNLDCCHVTNG-- 332
Query: 249 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 308
L + NL +LE L+L V+ + L L+ L L+L + ++D + ++ L
Sbjct: 333 ----GLQTIANLTNLENLDLSDNVVTSSGLALLTGLTTLKSLNLFSTGVSDAGVIHVTGL 388
Query: 309 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGG 343
+ L L++ ++T+SGL +L+ LDL G
Sbjct: 389 TNLVRLNLDSRLITDSGLACISGLTNLQELDLFGA 423
>gi|72386459|ref|XP_843654.1| leucine-rich repeat protein (LRRP) [Trypanosoma brucei TREU927]
gi|62360673|gb|AAX81083.1| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei]
gi|70800186|gb|AAZ10095.1| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 706
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 115/235 (48%), Gaps = 29/235 (12%)
Query: 106 SALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQN 165
S + AL+G+ L+E++LS K+ ++H++++S L KL L T L + + +SS +
Sbjct: 136 SRIRALSGVPTLEEVNLSGYSKLK-TDLEHIMTLSNLRKLTLDNTELDDECVVEISSNRI 194
Query: 166 LSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-- 222
L L +TD+ + + LE L L G + +G + P + L+L T
Sbjct: 195 LLHLSCNNCHHITDI--SPVAEIKTLEELSLSGCKNIKKGLEHICALPNVRKLSLRGTAA 252
Query: 223 ---------GVTKLPNISSLECLNLSFIQQVGAETDL-VLSLTALQNLN----------H 262
G T L ++ EC+N+S I+ +G + L VLSL N+ +
Sbjct: 253 NDACILSLSGSTHLADLDCSECMNISDIKALGKISPLEVLSLEKCINMKEGLEELAAIPN 312
Query: 263 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSI 316
L LNL T + D + +STFK+L+HL+ N ++TD+ L+ + L LSI
Sbjct: 313 LRELNLASTCIDDECVIKVSTFKQLVHLNCENCLAVTDI--QPLAKMKTLEYLSI 365
>gi|71650734|ref|XP_814059.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70878999|gb|EAN92208.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 934
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 107/217 (49%), Gaps = 29/217 (13%)
Query: 138 SISTLEKLWLSETGLTADGIAL-LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLW 196
S+ L L LS T +T +G+ +S L LS L L G + L+ L+ L +L LDL
Sbjct: 369 SLCALRDLDLSYTQVTEEGMYRDVSKLNKLSRLSLEGCRKIE-SLQWLRALNQLRVLDLG 427
Query: 197 GSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTA 256
S V++ L+ P L+ L+L W G I+SL+CL VGA D
Sbjct: 428 YSSVTDDSLTALRFCPELAKLDLQWCG-----RITSLKCL-------VGALCD------- 468
Query: 257 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN-ASLTDVSLHQLSSLSKLTNLS 315
L LNL +T V+D L PL F L +SL +++DV++ L +L++L +
Sbjct: 469 -----SLRELNLTETSVTDEGLVPLKYFAALEWISLEGCGAVSDVNV--LCNLTRLREVD 521
Query: 316 IRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAIL 352
+ +TN G+ S ++L+++ + + LT+ + L
Sbjct: 522 VGRTRVTNRGVVSLSQCQALRVMRMRQCYRLTDASFL 558
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 126/266 (47%), Gaps = 40/266 (15%)
Query: 100 CRRVTSSALWALTGMTC-----------LKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
CR V +L + ++C L++LDLS +VT+ GM +S L KL
Sbjct: 345 CRHVERLSLCMSSSVSCTRFLRHRSLCALRDLDLSY-TQVTEEGMYR--DVSKLNKL--- 398
Query: 149 ETGLTADGIALLSSLQ------NLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL-WGSQVS 201
+ L+ +G + SLQ L VLDLG VTD L +L+ +L LDL W +++
Sbjct: 399 -SRLSLEGCRKIESLQWLRALNQLRVLDLGYSSVTDDSLTALRFCPELAKLDLQWCGRIT 457
Query: 202 NRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSFIQQVGAETDLVLSLTA 256
+ V + L LNL T VT L ++LE ++L + GA +D+
Sbjct: 458 SLKCLVGALCDSLRELNLTETSVTDEGLVPLKYFAALEWISL---EGCGAVSDV----NV 510
Query: 257 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLS 315
L NL L +++ +T+V++ + LS + L + +R LTD S L +L +L +
Sbjct: 511 LCNLTRLREVDVGRTRVTNRGVVSLSQCQALRVMRMRQCYRLTDASF--LGALQQLEEVD 568
Query: 316 IRDAVLTNSGLGSFKPPRSLKLLDLH 341
+ D +TN G+ RSL+ L L
Sbjct: 569 LSDCPVTNEGIAELFGARSLRKLRLQ 594
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 122/293 (41%), Gaps = 59/293 (20%)
Query: 84 AYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTD----AGMKHLLSI 139
++LGA + L ++++DC VT+ + L G L++L L C V+D G++HL+ +
Sbjct: 556 SFLGALQQLEEVDLSDC-PVTNEGIAELFGARSLRKLRLQSCHAVSDVNFLGGLEHLMLL 614
Query: 140 STLEKLWLSETGLTADGIA-------------LLSSLQN---------LSVLDLGGLPVT 177
L + E G + G+A L+ SLQ L LDL VT
Sbjct: 615 D-LHHTTVDEEG--SVGLAQCPQLMTLIMHSVLVHSLQQWNTALFLPRLKRLDLSTTKVT 671
Query: 178 DLVLRSLQVLTKLEYLDLWGSQ----------VSNRGAAVLKMFPRLS----FLNLAWTG 223
L +++ LE L L G + + GA V + PR + + G
Sbjct: 672 SDALSFVRMCPILETLSLRGCKNITHLDFLILQPSSGAGVCAIVPRDAEPHDTVGDTIAG 731
Query: 224 VTKLPN--ISSLECL--NLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLF 279
K P+ S +E + N I+ A A+ + + L L L T V+D L
Sbjct: 732 KEKNPDDGPSPIETMTINDGVIKSTAA--------AAVVDRHRLRELTLSDTGVTDDGLR 783
Query: 280 PLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP 331
L L L L + ++TDV++ L LS+L L + +T SGL P
Sbjct: 784 ALQYCPGLERLRLAHCKNVTDVAV--LRWLSQLKELDLSATGVTGSGLAKLSP 834
>gi|395738814|ref|XP_003777155.1| PREDICTED: F-box/LRR-repeat protein 13 [Pongo abelii]
Length = 735
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 135/286 (47%), Gaps = 21/286 (7%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLK--ELDLSRCVKVTDAGMKHLL-SISTLEK 144
F L++L++A CRR T L L G C K LDLS C +++ G +++ S + +
Sbjct: 295 FHNLQNLSLAYCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGVMH 354
Query: 145 LWLSETGLTADGI--ALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQVS 201
L +++ D AL+ ++ L G P +TD ++L KL + G++
Sbjct: 355 LTINDMPTLTDNCVKALVEKCSRITSLVFTGAPHITDCTFKALST-CKLRKIRFEGNKRV 413
Query: 202 NRGA--AVLKMFPRLSFLNLA-WTGVT-----KLPNISSLECLNLSFIQQVGAETDLVLS 253
+ +V K +P LS + +A G+T L + L LNL+ ++G + L
Sbjct: 414 TDASFKSVDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIG-DMGLKQF 472
Query: 254 LTALQNLNHLERLNLEQ-TQVSDATLFPLST-FKELIHLSLRNAS-LTDVSLHQLSSLSK 310
L ++ + LNL Q+SDA++ LS L +LSLRN LT + + ++
Sbjct: 473 LDGPASIK-IRELNLSNCVQLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNIFS 531
Query: 311 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 356
L ++ + ++N GL + LK L + + +T+D I FCK
Sbjct: 532 LVSIDLSGTDISNEGLNVLSRHKKLKELSVSECYRITDDGIQAFCK 577
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 113/237 (47%), Gaps = 21/237 (8%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV 128
I G V DA + + + L + +ADC+ +T S+L +L+ + L L+L+ CV++
Sbjct: 405 IRFEGNKRVTDASFKSVDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRI 464
Query: 129 TDAGMKHLL----SISTLEKLWLSETGLTADG--IALLSSLQNLSVLDLGGLP-VTDLVL 181
D G+K L SI + +L LS +D + L NL+ L L +T +
Sbjct: 465 GDMGLKQFLDGPASIK-IRELNLSNCVQLSDASVMKLSERCPNLNYLSLRNCEHLTAQGI 523
Query: 182 RSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT------GVTKLPNISS-LE 234
+ + L +DL G+ +SN G VL +L L+++ G+ S LE
Sbjct: 524 GYIVNIFSLVSIDLSGTDISNEGLNVLSRHKKLKELSVSECYRITDDGIQAFCKSSVILE 583
Query: 235 CLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHL 290
L++S+ Q+ +D+++ A+ +N L L++ +++D+ + LS +H+
Sbjct: 584 HLDVSYCSQL---SDMIIKALAIYCIN-LTSLSIAGCPKITDSAMEMLSAKCHYLHI 636
Score = 41.2 bits (95), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 118/253 (46%), Gaps = 42/253 (16%)
Query: 117 LKELDLSRCVKVTDAGMKHLL-SISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 171
L+EL++S C TD M+H+ + L LS T +T + LL +LQNLS+
Sbjct: 247 LQELNVSDCPTFTDESMRHISEGCPGVLYLNLSNTTITNRTMRLLPRHFHNLQNLSLAYC 306
Query: 172 GGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWTGVTKL 227
TD L+ L + KL YLDL G +Q+S +G ++ + TGV L
Sbjct: 307 RRF--TDKGLQYLNLGNGCHKLIYLDLSGCTQISVQG---------FRYIANSCTGVMHL 355
Query: 228 -----PNISSLECLNLSFIQQVGAETDLVL---------SLTALQNLNHLERLNLE-QTQ 272
P ++ C+ + +++ T LV + AL L ++ E +
Sbjct: 356 TINDMPTLTD-NCVK-ALVEKCSRITSLVFTGAPHITDCTFKALSTCK-LRKIRFEGNKR 412
Query: 273 VSDATLFPL-STFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSF 329
V+DA+ + + L H+ + + +TD SL LS L +LT L++ + V + + GL F
Sbjct: 413 VTDASFKSVDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGLKQF 472
Query: 330 -KPPRSLKLLDLH 341
P S+K+ +L+
Sbjct: 473 LDGPASIKIRELN 485
>gi|168700133|ref|ZP_02732410.1| hypothetical protein GobsU_11435 [Gemmata obscuriglobus UQM 2246]
Length = 167
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 77/150 (51%), Gaps = 2/150 (1%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N+ DA + L +LN+ R VT + L + L LDL VTDAG+K
Sbjct: 2 NAYDAGVKELAALNKGLTTLNLRRTR-VTDVGVKELAALKALTNLDLG-GTGVTDAGVKE 59
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
L + L +L L T +T G+ L++L+NL+ LDLGG VTD + L L L LDL
Sbjct: 60 LSGLKGLTRLELRSTKITDAGVKELAALKNLNHLDLGGTKVTDAGAKELSGLNFLVTLDL 119
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 225
+QV++ G L L+ L+L TGVT
Sbjct: 120 SNTQVTDAGVKALTALTGLTTLDLHGTGVT 149
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 85/179 (47%), Gaps = 26/179 (14%)
Query: 130 DAGMKHLLSIST-LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLT 188
DAG+K L +++ L L L T +T G+ L++L+ L+ LDLGG VTD ++ L L
Sbjct: 5 DAGVKELAALNKGLTTLNLRRTRVTDVGVKELAALKALTNLDLGGTGVTDAGVKELSGLK 64
Query: 189 KLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAET 248
L L+L +++++ G L L+ L+L T VT GA+
Sbjct: 65 GLTRLELRSTKITDAGVKELAALKNLNHLDLGGTKVT-----------------DAGAK- 106
Query: 249 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 307
L LN L L+L TQV+DA + L+ L L L +TD L +L++
Sbjct: 107 -------ELSGLNFLVTLDLSNTQVTDAGVKALTALTGLTTLDLHGTGVTDAGLKELNA 158
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 84/187 (44%), Gaps = 27/187 (14%)
Query: 178 DLVLRSLQVLTK-LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
D ++ L L K L L+L ++V++ G L L+ L+L TGVT
Sbjct: 5 DAGVKELAALNKGLTTLNLRRTRVTDVGVKELAALKALTNLDLGGTGVTD---------- 54
Query: 237 NLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 296
+ +++ L L L RL L T+++DA + L+ K L HL L
Sbjct: 55 --AGVKE-------------LSGLKGLTRLELRSTKITDAGVKELAALKNLNHLDLGGTK 99
Query: 297 LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 356
+TD +LS L+ L L + + +T++G+ + L LDLHG +T+ + +
Sbjct: 100 VTDAGAKELSGLNFLVTLDLSNTQVTDAGVKALTALTGLTTLDLHGTG-VTDAGLKELNA 158
Query: 357 MHPRIEV 363
P+ +V
Sbjct: 159 ALPKCKV 165
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 65/119 (54%), Gaps = 2/119 (1%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L A + L +L++ VT + + L+G+ L L+L R K+TDAG+K L ++ L L
Sbjct: 36 LAALKALTNLDLGGTG-VTDAGVKELSGLKGLTRLEL-RSTKITDAGVKELAALKNLNHL 93
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG 204
L T +T G LS L L LDL VTD +++L LT L LDL G+ V++ G
Sbjct: 94 DLGGTKVTDAGAKELSGLNFLVTLDLSNTQVTDAGVKALTALTGLTTLDLHGTGVTDAG 152
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 82/172 (47%), Gaps = 26/172 (15%)
Query: 156 GIALLSSL-QNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRL 214
G+ L++L + L+ L+L VTD+ ++ L L L LDL G+ V++ G L L
Sbjct: 7 GVKELAALNKGLTTLNLRRTRVTDVGVKELAALKALTNLDLGGTGVTDAGVKELSGLKGL 66
Query: 215 SFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVS 274
+ L L T +T V L AL+NLNHL+ L T+V+
Sbjct: 67 TRLELRSTKITDAG----------------------VKELAALKNLNHLD---LGGTKVT 101
Query: 275 DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 326
DA LS L+ L L N +TD + L++L+ LT L + +T++GL
Sbjct: 102 DAGAKELSGLNFLVTLDLSNTQVTDAGVKALTALTGLTTLDLHGTGVTDAGL 153
>gi|296123881|ref|YP_003631659.1| serine/threonine protein kinase-related protein [Planctomyces
limnophilus DSM 3776]
gi|296016221|gb|ADG69460.1| Serine/threonine protein kinase-related protein [Planctomyces
limnophilus DSM 3776]
Length = 1655
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 104/217 (47%), Gaps = 12/217 (5%)
Query: 152 LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF 211
LT + QNLS L L + +TD LR+ + T + L L G V+++G +
Sbjct: 1435 LTPRDFEIFKGCQNLSDLQLLNMGITDEHLRAFEGTTSITKLKLDGQAVTSKGLSYFSGC 1494
Query: 212 PRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAE-TDLVLSLTALQNLNHLERLNLEQ 270
RL+FL++ W I S+ + +++ G TD S+ A ++L +LE L
Sbjct: 1495 KRLTFLSV-WATQADDKFIQSIASPDYTYLNLGGTRITD--ASIAAFESLQNLEMATLNF 1551
Query: 271 TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL---- 326
T ++D + L++ + L +L L + LTD S L++L L++ + ++ GL
Sbjct: 1552 TGLTDEGIEHLASAENLTYLGLNHTRLTDASAKVFLKLNQLEELTLSNTQFSDQGLLLLV 1611
Query: 327 GSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEV 363
+ + L LL+ +T D++ +F +HP+ +
Sbjct: 1612 NALPNLKRLNLLETK----VTADSVDKFQSLHPKCRI 1644
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 9/135 (6%)
Query: 100 CRRVTSSALWALTG----MTCLKELDLSR----CVKVTDAGMKHLLSISTLEKLWLSETG 151
C+R+T ++WA + + D + ++TDA + S+ LE L+ TG
Sbjct: 1494 CKRLTFLSVWATQADDKFIQSIASPDYTYLNLGGTRITDASIAAFESLQNLEMATLNFTG 1553
Query: 152 LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL-KM 210
LT +GI L+S +NL+ L L +TD + L +LE L L +Q S++G +L
Sbjct: 1554 LTDEGIEHLASAENLTYLGLNHTRLTDASAKVFLKLNQLEELTLSNTQFSDQGLLLLVNA 1613
Query: 211 FPRLSFLNLAWTGVT 225
P L LNL T VT
Sbjct: 1614 LPNLKRLNLLETKVT 1628
>gi|385800049|ref|YP_005836453.1| hypothetical protein [Halanaerobium praevalens DSM 2228]
gi|309389413|gb|ADO77293.1| conserved repeat domain protein [Halanaerobium praevalens DSM 2228]
Length = 2607
Score = 65.1 bits (157), Expect = 6e-08, Method: Composition-based stats.
Identities = 64/212 (30%), Positives = 107/212 (50%), Gaps = 19/212 (8%)
Query: 106 SALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQN 165
S L L T L +L L K++D + L +++ L L L+E + I L++L N
Sbjct: 1084 SDLSGLEHFTSLDKLALYGGKKISD--LSPLQNLTNLNSLTLTEN--VINNIDYLANLTN 1139
Query: 166 LSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG-AAVLKMFPRLSFLNLAWTGV 224
L+ LDL ++D+ + L LTKL L L + +++ +VL+ L L+L +
Sbjct: 1140 LTRLDLSSNKISDISV--LANLTKLTELVLGSNIITDESDLSVLENLTELEHLSLEENEI 1197
Query: 225 TKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTF 284
+ + ++S+L LN + E +++L+NL L LNL T ++D L LS F
Sbjct: 1198 SNIDSLSNLSKLNYLHLGSTNVE-----DISSLKNLTALNFLNLNSTYINDEDLTILSNF 1252
Query: 285 KELIHLSLR--NASLTDVSLHQLSSLSKLTNL 314
K L L L+ N ++D+S+ ++ LTNL
Sbjct: 1253 KSLTELYLQSSNDKISDISV-----VADLTNL 1279
>gi|406832962|ref|ZP_11092556.1| hypothetical protein SpalD1_15024 [Schlesneria paludicola DSM
18645]
Length = 236
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 80/186 (43%), Gaps = 32/186 (17%)
Query: 94 SLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLW---LSET 150
S++ R L + G+ L LDL + TD G HL I+ LE L LS
Sbjct: 51 SVSFYGSSRFNGKFLHLVKGLDQLTSLDLRK----TDIGDTHLKEIAELENLTTLRLSNV 106
Query: 151 GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKM 210
+T G+ L S + LS LDL G +TD L+ L V L YLDL + ++ G L
Sbjct: 107 PITDAGLIELRSQKKLSTLDLAGTRITDDGLKELSVHHSLRYLDLSETTITGMGLKDLSG 166
Query: 211 FPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 270
P L LNL T V N + LEC + HL R+NL +
Sbjct: 167 LPNLLSLNLENTKV----NDTGLEC---------------------VHEFKHLIRINLRR 201
Query: 271 TQVSDA 276
T V+DA
Sbjct: 202 TSVTDA 207
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
+T + L L L LDL+ ++TD G+K L +L L LSET +T G+ LS
Sbjct: 108 ITDAGLIELRSQKKLSTLDLA-GTRITDDGLKELSVHHSLRYLDLSETTITGMGLKDLSG 166
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG 204
L NL L+L V D L + L ++L + V++ G
Sbjct: 167 LPNLLSLNLENTKVNDTGLECVHEFKHLIRINLRRTSVTDAG 208
>gi|452824610|gb|EME31612.1| F-box and leucine-rich repeat protein GRR1 [Galdieria sulphuraria]
Length = 740
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 95/188 (50%), Gaps = 21/188 (11%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
E + L + + ++ + ++G+ + L+ L + +C RV + AL + +T L+ L+L CVK
Sbjct: 198 EFLNLSSCSRITSDALLHIGSLKNLKHLKLRNCARVDNRALEHIGNLTSLETLELYECVK 257
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS-----LQNLSVLDLGGLPVTDLVLR 182
+ D G+K+L S + L LS T ++ADGIA L+ L+NL + L + +
Sbjct: 258 IDDNGLKYLQKCSQIRHLCLSGTCISADGIASLADIFMPHLENLHLTRCSNLVGSQFSV- 316
Query: 183 SLQVLTK------LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT------GVTKLPNI 230
SL+ L+K L YL +V A+ FP+L LNL G++ L +
Sbjct: 317 SLRKLSKNMKRLQLRYLHCVDDEVLQ---AISDSFPQLESLNLTDCRYVTDRGISWLEKL 373
Query: 231 SSLECLNL 238
SSL L L
Sbjct: 374 SSLSMLKL 381
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 150/317 (47%), Gaps = 29/317 (9%)
Query: 70 IELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVT 129
++L G + + M L FR L +L + C + + +L + + CLK L ++ C K++
Sbjct: 125 LDLSGCSQLSNVGMEALSYFRSLETLVLDHCSSLGNISLSYIRDIPCLKSLSIACCDKIS 184
Query: 130 DAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVL 187
+G++ L + LE L LS +T+D + + SL+NL L L V + L + L
Sbjct: 185 GSGLEQLFYLKRLEFLNLSSCSRITSDALLHIGSLKNLKHLKLRNCARVDNRALEHIGNL 244
Query: 188 TKLEYLDLWGS-QVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGA 246
T LE L+L+ ++ + G L+ ++ L L+ T ++ I+SL
Sbjct: 245 TSLETLELYECVKIDDNGLKYLQKCSQIRHLCLSGTCISA-DGIASL------------- 290
Query: 247 ETDLVLSLTALQNLNHLERL-NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 305
D+ + L+NL HL R NL +Q S +L LS K + L LR D + Q
Sbjct: 291 -ADIF--MPHLENL-HLTRCSNLVGSQFS-VSLRKLS--KNMKRLQLRYLHCVDDEVLQA 343
Query: 306 --SSLSKLTNLSIRDA-VLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIE 362
S +L +L++ D +T+ G+ + SL +L L GG +++ IL+ + RI
Sbjct: 344 ISDSFPQLESLNLTDCRYVTDRGISWLEKLSSLSMLKL-GGTSVSDYGILRIKDLLKRIS 402
Query: 363 VWHELSVICPSDQIGSN 379
S I S++I S+
Sbjct: 403 ELDISSCILCSEKITSH 419
>gi|290977840|ref|XP_002671645.1| member of the leucine-rich repeat protein family [Naegleria
gruberi]
gi|284085215|gb|EFC38901.1| member of the leucine-rich repeat protein family [Naegleria
gruberi]
Length = 392
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 131/278 (47%), Gaps = 30/278 (10%)
Query: 93 RSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGL 152
R+ + DC+ +++ L +LD+ + + D G+ ++ +++ L KL +S +
Sbjct: 91 RNETIFDCK------IFSAMMKNRLVDLDM-KMNNIGDIGVSYISNLTKLTKLNVSYNRI 143
Query: 153 TADGIALLSSLQNLSVLDLG----GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
+++G LS ++ L+ LD+ G + + ++ LT +L+++ +++ RG +
Sbjct: 144 SSEGAKYLSKMKQLTYLDISHNKIGEDGSKFICNGIRQLT---HLNIYYNEIGVRGVKFI 200
Query: 209 KMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSF--IQQVGAETDLVLSLTALQNLN 261
+L+ LN+ G+ L + L LN+S I+ GA+ LV +T L NLN
Sbjct: 201 GALKQLTSLNVGGNRIGDQGIEHLMRMHQLVDLNISNNNIRVEGAK--LVSEMTQLTNLN 258
Query: 262 HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVL 321
+ + + D +S K+LI L + L++ +S + LTNL IR +
Sbjct: 259 ------IRKNIIGDDGAKYISEMKQLIKLDIGKNYLSNRGAKYISEMKYLTNLDIRSNNI 312
Query: 322 TNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHP 359
G + L L+L+G + +T++ I C ++
Sbjct: 313 REEGAEFIGEMKQLTNLNLNGNY-ITDEGIKHLCGLYQ 349
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 87/222 (39%), Gaps = 51/222 (22%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + + ++GA + L SLNV R + D G++H
Sbjct: 190 NEIGVRGVKFIGALKQLTSLNVGGNR--------------------------IGDQGIEH 223
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
L+ + L L +S + +G L+S + L+ L++ + D + + + +L LD+
Sbjct: 224 LMRMHQLVDLNISNNNIRVEGAKLVSEMTQLTNLNIRKNIIGDDGAKYISEMKQLIKLDI 283
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLT 255
+ +SNRGA + L+ L++ I++ GAE
Sbjct: 284 GKNYLSNRGAKYISEMKYLTNLDIRSNN-----------------IREEGAE-------- 318
Query: 256 ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 297
+ + L LNL ++D + L +L+ LS+ N +
Sbjct: 319 FIGEMKQLTNLNLNGNYITDEGIKHLCGLYQLVSLSIYNTGI 360
>gi|343419347|emb|CCD19427.1| leucine-rich repeat protein, putative [Trypanosoma vivax Y486]
Length = 1478
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 89/274 (32%), Positives = 135/274 (49%), Gaps = 33/274 (12%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L LR+L+++ C +T + L+ ++ L+ DLS C +TD + L ++S LE L
Sbjct: 443 LSELSSLRTLDLSHCTGITD--VSPLSKLSSLRTFDLSHCTGITD--VSPLSTLSGLEVL 498
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL-WGSQVSNRG 204
LS A G+ L SL+ L L L L + D VLR + VL L LDL + ++N
Sbjct: 499 NLSGCTGVASGVDSLCSLRMLRELRLSRLAINDAVLRDIVVLKCLRTLDLSHCTGITN-- 556
Query: 205 AAVLKMFPRLSFLNLAW----TGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNL 260
+ L L LNL+ T ++ L +++ + LNLSF + TD ++ L L
Sbjct: 557 VSPLSTLSGLEVLNLSGCADITDISPLSDLNIMHTLNLSFCTGI---TD----VSPLSKL 609
Query: 261 NHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRD 318
+ LE LNL T ++D + PLS L L L + + +TDVS LS +S L L +
Sbjct: 610 SRLETLNLMYCTGITDVS--PLSLISNLRTLDLSHCTGITDVS--PLSLISNLRTLDLSH 665
Query: 319 AVLTNSGLGSFKPPRS----LKLLDLHGGWLLTE 348
+G+ PP S L+ LDL G +T+
Sbjct: 666 C----TGITDV-PPLSMLIRLEKLDLSGCTGITD 694
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 133/267 (49%), Gaps = 37/267 (13%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L L +LN+ C +T + +L ++ L+ LDLS C +TD L+ S L L
Sbjct: 836 LSKLSRLETLNLMYCTGITDVSPLSL--ISNLRTLDLSHCTGITDVSPLSLM--SNLCSL 891
Query: 146 WLSE-TGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDL-WGSQVSN 202
+LS TG+T + LS L L LDL G +TD + L L++LE L+L + + +++
Sbjct: 892 YLSHCTGIT--DVPPLSMLIRLEKLDLSGCTGITD--VSPLSKLSRLETLNLMYCTGITD 947
Query: 203 RGAAVLKMFPRLSFLNLAW----TGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQ 258
+ L RL LNL + T V+ L +S LE LNL + + TD ++ L
Sbjct: 948 --VSPLSKLSRLETLNLMYCTGITDVSPLSKLSRLETLNLMYCTGI---TD----VSPLS 998
Query: 259 NLNHLERLNLE-QTQVSDATLFPLSTFKELIHLSLRN-ASLTDVSLHQLSSLSKLTNLSI 316
+ +L L+L T ++D + PLS L +LSL N A +TDVS LS+L +L L +
Sbjct: 999 DFINLRTLDLSFYTGITDVS--PLSMLIRLENLSLSNIAGITDVS--PLSTLIRLNVLYL 1054
Query: 317 RDAVLTNSGLGSFKP---PRSLKLLDL 340
+G+ P SL+ LDL
Sbjct: 1055 SGC----TGITDVSPLSKLSSLRTLDL 1077
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 126/237 (53%), Gaps = 24/237 (10%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L LR+L+++ C +T + +L ++ L+ LDLS C +TD + L + LEKL
Sbjct: 629 LSLISNLRTLDLSHCTGITDVSPLSL--ISNLRTLDLSHCTGITD--VPPLSMLIRLEKL 684
Query: 146 WLSE-TGLT-ADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL-WGSQVSN 202
LS TG+T ++ LS L+ L+++ G +TD + L L++LE L+L + + +++
Sbjct: 685 DLSGCTGITDVSPLSKLSRLETLNLMYCTG--ITD--VSPLSKLSRLETLNLMYCTGITD 740
Query: 203 RGAAVLKMFPRLSFLNLAW-TGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLN 261
+ L L LNL++ TG+T + +S L + L + G + ++ L L+
Sbjct: 741 --VSPLSKMSSLYTLNLSYCTGITDVSPLSML--IRLETLDLTGCTG--ITDVSPLSKLS 794
Query: 262 HLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSI 316
LE LNL T ++D + PLS L L+L + +TDVS LS LS+L L++
Sbjct: 795 RLETLNLRYCTGITDVS--PLSKLSRLETLNLMYCTGITDVS--PLSKLSRLETLNL 847
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 117/251 (46%), Gaps = 41/251 (16%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAG-MKHLLSISTLEKLWLSET 150
L L ++ C +T + L+ ++ L+ LDLS C +TD + L + TL ++ T
Sbjct: 1049 LNVLYLSGCTGITD--VSPLSKLSSLRTLDLSHCTGITDVSPLSKLSRLETLNLMYC--T 1104
Query: 151 GLTADGIALLSSLQNLSVLDL----GGLPVTDLVLRS------------------LQVLT 188
G+T ++ LS + NL LDL G V+ L L S L +L
Sbjct: 1105 GIT--DVSPLSLISNLRTLDLSHCTGITDVSPLSLMSNLCSLYLSHCTGITDVPPLSMLI 1162
Query: 189 KLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW-TGVTKLPNISSLECLNLSFIQQVGAE 247
+LE LDL G + L RL LNL + TG+T + +S + L ++
Sbjct: 1163 RLEKLDLSGCT-GITDVSPLSKLSRLETLNLMYCTGITDVSPLSLMSNLCSLYLSHCTGI 1221
Query: 248 TDLVLSLTALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQL 305
TD ++ L L LE+L+L T ++D + PLS L L+L + +TDVS L
Sbjct: 1222 TD----VSPLSMLIRLEKLDLSGCTGITDVS--PLSKLSRLETLNLMYCTGITDVS--PL 1273
Query: 306 SSLSKLTNLSI 316
S LS+L L++
Sbjct: 1274 SKLSRLETLNL 1284
>gi|443729605|gb|ELU15470.1| hypothetical protein CAPTEDRAFT_224593 [Capitella teleta]
Length = 858
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 109/234 (46%), Gaps = 32/234 (13%)
Query: 28 RRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVF-KHNAEAIELRGENSVDAEWMAYL 86
R+ +SL LPA++A+ LL+ L++ +L+ P L F + + + L E + +
Sbjct: 435 RQPIQSLHGLPANVAEGLLKQLMKEKLLRPKTLHPFIPSHLQTLLLDYYPYATNELLHEI 494
Query: 87 GAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLW 146
L L++ C +T L ++ + LK L+L+ C ++TD
Sbjct: 495 RLHNCLAHLSLKACSLITDRGLQDISSLKRLKVLNLAACTQLTD---------------- 538
Query: 147 LSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL--QVLTKLEYLDLWGSQVSNRG 204
+ + L+ L NL VL L V+D ++ L Q LT L LDL +QV++R
Sbjct: 539 --------NCLPLVRELPNLQVLILESTGVSDRGMQELFHQPLTSLVNLDLSKTQVTHRI 590
Query: 205 AAVLKMFPRLSFLNLAWTGVTKLPNISS--LECLNLSFIQQVGAETDLVLSLTA 256
+ K P+LS LNL + V L + L+ LNLS + V TD +L L+
Sbjct: 591 FNLAKNAPKLSHLNLEQSEVASLSGVKELCLQSLNLSHTKIV---TDSLLCLSG 641
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 93/189 (49%), Gaps = 11/189 (5%)
Query: 53 RLIFPSLLEVFKHNAEAIELRGENSVDAE-WMAYLGAFRYLRSLNVADCRRVTSSALWAL 111
+++ SLL + + A+ + +++ + + YL + + L+ L++ ++ L
Sbjct: 630 KIVTDSLLCLSGCDIRALNISNTPNIEGDLGLEYLQSLKLLQHLSLPSRLSLSDHGLQFT 689
Query: 112 TGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDL 171
T M L LDL+ + V D GM+H+ I++L +L L T +T G+ L L NL + L
Sbjct: 690 TAMP-LVLLDLTNYLNVGDDGMRHIGKITSLRRLLLCNTKITDGGLLFLRGLVNLEEISL 748
Query: 172 GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFP--RLSFLNLAWTGVT---- 225
+TD ++ T+L+ L L + +SN + P LS LNL+ T ++
Sbjct: 749 DRTAITDEGACVVEAFTRLQQLSLTETGISNAFLEHQSLNPCYLLSKLNLSRTAISDKGV 808
Query: 226 ---KLPNIS 231
+LPN++
Sbjct: 809 RCLRLPNLT 817
>gi|124004058|ref|ZP_01688905.1| Rab family protein [Microscilla marina ATCC 23134]
gi|123990637|gb|EAY30117.1| Rab family protein [Microscilla marina ATCC 23134]
Length = 1165
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 126/276 (45%), Gaps = 26/276 (9%)
Query: 65 HNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSR 124
H+ + I LR D L + LR+L D R S L L ++ L+ +DL R
Sbjct: 268 HSLQLIVLRDNPVTD------LTPLQSLRNLQSLDLRNNQISDLTPLQNLSSLQSIDL-R 320
Query: 125 CVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL 184
+ D L L + + +A L +L NL +DL ++DL L
Sbjct: 321 HNPINDLLPLQNLPNLQSIDLKYNHI----NDLAPLQNLPNLESIDLSDNQISDLT--PL 374
Query: 185 QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQV 244
Q L+ L+ +DL +QV++ A L+ P L ++L+ + L + NL +Q +
Sbjct: 375 QNLSNLQSIDLSNNQVNH--LASLQYLPNLESIDLSDNQINDLAPLQ-----NLGDLQSI 427
Query: 245 GAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQ 304
+ + LT LQNL +LE ++L Q+SD T PL L ++LRN ++D+S
Sbjct: 428 DLSNNQIHDLTPLQNLPNLESIDLSDNQISDLT--PLQNLGSLQSINLRNNQVSDLS--P 483
Query: 305 LSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
L +L L +++ D + S L + LK +DL
Sbjct: 484 LQALHDLQAINLSDNQI--SDLAPLQKLPHLKSIDL 517
>gi|66802316|ref|XP_629940.1| hypothetical protein DDB_G0291806 [Dictyostelium discoideum AX4]
gi|60463333|gb|EAL61524.1| hypothetical protein DDB_G0291806 [Dictyostelium discoideum AX4]
Length = 956
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 79/159 (49%), Gaps = 10/159 (6%)
Query: 70 IELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVT 129
+ L N ++ + + YL L L++++C R+T+ +L + MT L++LD+S + +
Sbjct: 152 LNLSNSNKLEDKGIKYLKGLPKLTELDISNCCRITNRSLKYIGFMTRLEQLDISNNLNLN 211
Query: 130 DAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQN-LSVLDLGGLPVTDLVLRSLQVLT 188
D K+L+ +S L++L T I + QN L+ + GG S+Q
Sbjct: 212 DQAFKYLMVLSRLKELVARNVPFTDHSIC--TQFQNQLNNYNHGG-------SISIQPFQ 262
Query: 189 KLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKL 227
L ++L S +SN+ + FP LS + L+ T T++
Sbjct: 263 SLSIINLSNSFISNQSLPIFLQFPSLSTIYLSNTKCTQI 301
>gi|300704275|ref|YP_003745878.1| leucine-rich-repeat type III effector protein (gala6) [Ralstonia
solanacearum CFBP2957]
gi|299071939|emb|CBJ43268.1| leucine-rich-repeat type III effector protein (GALA6) [Ralstonia
solanacearum CFBP2957]
Length = 519
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 98/210 (46%), Gaps = 13/210 (6%)
Query: 109 WALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSV 168
AL G T L+ELDL RC + G L ++L L L + DG L++ + L++
Sbjct: 290 GALGGSTTLRELDL-RCCAIDPYGASALARNTSLASLHLGSNRIGDDGARALATSRTLTL 348
Query: 169 LDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW-----TG 223
LDL + D ++L L L+L+G++V + GAA L PRL+ LNL G
Sbjct: 349 LDLSRNNIHDAGAQALAGNGSLTSLNLYGNEVDDDGAAALAQHPRLTSLNLGRNRIGPNG 408
Query: 224 VTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS- 282
L ++L L+LS ++G E LSL+ + L LN+ + +A +
Sbjct: 409 AQHLAKSATLTELDLSE-NRLGPEGAEALSLSTV-----LTTLNVSDNAIGEAGARAFAE 462
Query: 283 TFKELIHLSLRNASLTDVSLHQLSSLSKLT 312
L L RN + + + L + ++LT
Sbjct: 463 KSTSLTSLDARNNRMGEAGANLLEANTRLT 492
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 116/269 (43%), Gaps = 19/269 (7%)
Query: 79 DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK--VTDAGMKHL 136
D A+LG + L S+ +T AL AL ++ LD+SRC V++AG+ HL
Sbjct: 23 DPAMFAHLGKYPALTSVRFKG--ELTLEALKALP--PGVEHLDISRCTGRGVSNAGLAHL 78
Query: 137 LSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLW 196
+ L+ L L+ + A+G LL++ +L+ L L G + D +L + LDL
Sbjct: 79 -ATRPLKSLSLNGIEIDAEGARLLATCASLTSLSLTGCSIGDRAATALAQSRSIASLDLS 137
Query: 197 GSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSFIQQVGAETDLV 251
+ + GA L P +S LNL G+ L +L+ LN S +G L
Sbjct: 138 VNMIGPDGARALASAPLVS-LNLHNNGIGDEGALALATSGTLKSLNASN-NGIGDAGVLG 195
Query: 252 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ + L +LNL + A L L L L L D L+ L
Sbjct: 196 FADNTV-----LTQLNLAGNMIGPAGARALRRNTSLTELDLSTNRLGDAGAQALAGSRSL 250
Query: 312 TNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
T+L++R + + G + +LK L+L
Sbjct: 251 TSLNVRSNEIGDDGTEALARNTTLKSLNL 279
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 107/284 (37%), Gaps = 46/284 (16%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCV----------- 126
+DAE L L SL++ C + A AL + LDLS +
Sbjct: 93 IDAEGARLLATCASLTSLSLTGCS-IGDRAATALAQSRSIASLDLSVNMIGPDGARALAS 151
Query: 127 -----------KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP 175
+ D G L + TL+ L S G+ G+ + L+ L+L G
Sbjct: 152 APLVSLNLHNNGIGDEGALALATSGTLKSLNASNNGIGDAGVLGFADNTVLTQLNLAGNM 211
Query: 176 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN-----LAWTGVTKLPNI 230
+ R+L+ T L LDL +++ + GA L L+ LN + G L
Sbjct: 212 IGPAGARALRRNTSLTELDLSTNRLGDAGAQALAGSRSLTSLNVRSNEIGDDGTEALARN 271
Query: 231 SSLECLNLSF-------IQQVGAETDL-----------VLSLTALQNLNHLERLNLEQTQ 272
++L+ LNLS+ +G T L +AL L L+L +
Sbjct: 272 TTLKSLNLSYNPIGFWGAGALGGSTTLRELDLRCCAIDPYGASALARNTSLASLHLGSNR 331
Query: 273 VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 316
+ D L+T + L L L ++ D L+ LT+L++
Sbjct: 332 IGDDGARALATSRTLTLLDLSRNNIHDAGAQALAGNGSLTSLNL 375
>gi|290989752|ref|XP_002677501.1| predicted protein [Naegleria gruberi]
gi|284091109|gb|EFC44757.1| predicted protein [Naegleria gruberi]
Length = 340
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 128/273 (46%), Gaps = 36/273 (13%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G+ S ++ + YLG L L + + + + ++GM L +LD+S +T G
Sbjct: 39 GDRSRFSKGIKYLGNLMNLSELYI-NSNEIGDNGAEDISGMKQLTKLDVSSN-DITTKGA 96
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSS-LQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 192
KH+ ++ L L + E + A GI ++ L L+ LD+G + L +++ L++L
Sbjct: 97 KHISKLNKLVSLKMEENMIDAQGIKYITDQLNQLTELDIGSNDLGVLGAKAVSELSQLTS 156
Query: 193 LDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAE----- 247
L + + + N GAA +++L N++ L C+N + I GA+
Sbjct: 157 LSIENNNLLNEGAAY----------------ISRLLNLTDL-CINSNQIDSEGAKDIIKL 199
Query: 248 ---TDLVLSLTAL--------QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 296
T L +S +L LN+L L++ +++D + P+S K+L L +
Sbjct: 200 KQLTTLFISGNSLLDEGAKLISELNNLTVLDISDNELTDEGVEPISKLKQLKTLEIDENQ 259
Query: 297 LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 329
++D + + L++LT L+I +++ GL S
Sbjct: 260 ISDEGIESICGLNQLTELNIDYNLISAEGLSSI 292
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 110/241 (45%), Gaps = 40/241 (16%)
Query: 75 ENSVDAEWMAYL-GAFRYLRSLNVA--DCRRVTSSALWALTGMTCLKELD---------- 121
EN +DA+ + Y+ L L++ D + + A+ L+ +T L +
Sbjct: 112 ENMIDAQGIKYITDQLNQLTELDIGSNDLGVLGAKAVSELSQLTSLSIENNNLLNEGAAY 171
Query: 122 LSRCVKVTD----------AGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDL 171
+SR + +TD G K ++ + L L++S L +G L+S L NL+VLD+
Sbjct: 172 ISRLLNLTDLCINSNQIDSEGAKDIIKLKQLTTLFISGNSLLDEGAKLISELNNLTVLDI 231
Query: 172 GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNIS 231
+TD + + L +L+ L++ +Q+S+ G + +L+ LN+ + N+
Sbjct: 232 SDNELTDEGVEPISKLKQLKTLEIDENQISDEGIESICGLNQLTELNIDY-------NLI 284
Query: 232 SLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD-----ATLFPLSTFKE 286
S E L+ ++G E ++ +L +L+ L ++Q S T PL T K+
Sbjct: 285 SAEGLSSISGNEIGDEGAEIIG-----DLTNLKELTVDQNSRSKYHEILKTKLPLLTIKK 339
Query: 287 L 287
+
Sbjct: 340 I 340
>gi|71668063|ref|XP_820975.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70886340|gb|EAN99124.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 930
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 105/217 (48%), Gaps = 29/217 (13%)
Query: 138 SISTLEKLWLSETGLTADGIAL-LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLW 196
S+ L L LS T +T +G+ +S L LS L L G + L+ L+ L +L LDL
Sbjct: 365 SLCALRDLDLSYTQVTEEGMYRDVSKLNKLSRLSLEGCRKIE-SLQWLRALNQLRVLDLG 423
Query: 197 GSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTA 256
S V++ L+ P L+ L+L W G I+SL CL VGA D
Sbjct: 424 YSSVTDDSLTALRFCPELAKLDLQWCG-----RITSLMCL-------VGALCD------- 464
Query: 257 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN-ASLTDVSLHQLSSLSKLTNLS 315
L LNL +T V+D L PL F L +SL +++DV++ L +L++L +
Sbjct: 465 -----SLRELNLTETSVTDEGLVPLKDFAALEWISLEGCGAVSDVNV--LCNLTRLREVD 517
Query: 316 IRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAIL 352
+ +TN G+ S ++L+++ + + LT+ L
Sbjct: 518 VGRTRVTNRGVVSLSQCQALRVMRMRQCYRLTDANFL 554
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 128/266 (48%), Gaps = 40/266 (15%)
Query: 100 CRRVTSSALWALTGMTC-----------LKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
CR V +L + ++C L++LDLS +VT+ GM +S L KL
Sbjct: 341 CRHVERLSLCMSSSVSCTRFLRHRSLCALRDLDLSY-TQVTEEGMYR--DVSKLNKL--- 394
Query: 149 ETGLTADGIALLSSLQ------NLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL-WGSQVS 201
+ L+ +G + SLQ L VLDLG VTD L +L+ +L LDL W +++
Sbjct: 395 -SRLSLEGCRKIESLQWLRALNQLRVLDLGYSSVTDDSLTALRFCPELAKLDLQWCGRIT 453
Query: 202 NRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSFIQQVGAETDLVLSLTA 256
+ V + L LNL T VT L + ++LE ++L + GA +D+
Sbjct: 454 SLMCLVGALCDSLRELNLTETSVTDEGLVPLKDFAALEWISL---EGCGAVSDV----NV 506
Query: 257 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLS 315
L NL L +++ +T+V++ + LS + L + +R LTD + L +L +L +
Sbjct: 507 LCNLTRLREVDVGRTRVTNRGVVSLSQCQALRVMRMRQCYRLTDANF--LGALQQLEEVD 564
Query: 316 IRDAVLTNSGLGSFKPPRSLKLLDLH 341
+ D +TN G+ + RSL+ L L
Sbjct: 565 LSDCPVTNEGIAALFGARSLRKLRLQ 590
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 125/292 (42%), Gaps = 59/292 (20%)
Query: 85 YLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTD----AGMKHLLSIS 140
+LGA + L ++++DC VT+ + AL G L++L L C V D G++HL+ +
Sbjct: 553 FLGALQQLEEVDLSDCP-VTNEGIAALFGARSLRKLRLQSCHAVNDVNFLGGLEHLMLLD 611
Query: 141 TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ------VLTKLEYLD 194
L T + +G L+ L L + +++ SLQ L +L+ LD
Sbjct: 612 ------LHHTTVDEEGSVGLAQCPQLMTLIM-----HSVLVHSLQQWNAALFLPRLKRLD 660
Query: 195 LWGSQVSNRGAAVLKMFPRLSFLNL-----------------AWTGVTKL------PNIS 231
L ++V++ + L+M P L L+L + TGV + P+ +
Sbjct: 661 LSTTKVTSDALSFLRMCPVLETLSLRGCKNITHLDFLILQPSSGTGVCAIVPRDVEPHDT 720
Query: 232 SLECL---------NLSFIQQVGAETDLVLS--LTALQNLNHLERLNLEQTQVSDATLFP 280
+ + S I+ + ++ S + A+ + + L L L T V+D L
Sbjct: 721 VGDIIAGKEKNPDDGPSPIETMTTNDGVIKSTAVAAVVSRHRLRELTLSGTGVTDEGLRA 780
Query: 281 LSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP 331
L L L L + + TDV++ L LS+L L + +T SGL P
Sbjct: 781 LQYCPGLERLRLAHCKNFTDVAV--LRWLSQLKELDLSATGVTGSGLAKLSP 830
>gi|421897032|ref|ZP_16327415.1| type III effector gala6 protein [Ralstonia solanacearum MolK2]
gi|206588197|emb|CAQ18765.1| type III effector gala6 protein [Ralstonia solanacearum MolK2]
Length = 625
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 79/159 (49%), Gaps = 8/159 (5%)
Query: 109 WALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSV 168
AL G T L+ELDL RC + G L ++L L L + DG L++ + L++
Sbjct: 396 GALGGSTTLRELDL-RCCAIDPYGASALARNTSLASLHLGSNRIGDDGARALATSRTLTL 454
Query: 169 LDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW-----TG 223
LDL + D ++L L L+L+G++V + GAA L PRL+ LNL G
Sbjct: 455 LDLSRNNIHDAGAQALAGNGSLTSLNLYGNEVDDDGAAALAQHPRLTSLNLGRNRIGPNG 514
Query: 224 VTKLPNISSLECLNLSFIQQVGAETDLVLSL-TALQNLN 261
L ++L L+LS ++G E LSL T L LN
Sbjct: 515 AQHLAKSATLTELDLSE-NRIGPEGAEALSLSTVLTTLN 552
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 116/269 (43%), Gaps = 19/269 (7%)
Query: 79 DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK--VTDAGMKHL 136
D A+LG + L S+ +T AL AL ++ LD+SRC V++AG+ HL
Sbjct: 129 DPAMFAHLGKYPALTSVRFKG--ELTLEALKALP--PGVEHLDISRCTGRGVSNAGLAHL 184
Query: 137 LSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLW 196
+ L+ L L+ + A+G LL++ +L+ L L G + D +L + LDL
Sbjct: 185 -ATRPLKSLSLNGIEIDAEGARLLATCASLTSLSLTGCSIGDRAATALAQSRSIASLDLS 243
Query: 197 GSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSFIQQVGAETDLV 251
+ + GA L P LS LNL G+ L +L+ LN S +G L
Sbjct: 244 VNMIGPDGARALASAPLLS-LNLHNNGIGDEGALALATSGTLKSLNASN-NGIGDAGVLG 301
Query: 252 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ + L +LNL + A L L L L L D L+ L
Sbjct: 302 FADNTV-----LTQLNLAGNMIGPAGARALRRNTSLTELDLSTNRLGDAGAQVLAGSRSL 356
Query: 312 TNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
T+L++R + + G + +LK L+L
Sbjct: 357 TSLNLRHNEIGDDGTEALARNTTLKSLNL 385
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 108/284 (38%), Gaps = 46/284 (16%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCV----------- 126
+DAE L L SL++ C + A AL + LDLS +
Sbjct: 199 IDAEGARLLATCASLTSLSLTGCS-IGDRAATALAQSRSIASLDLSVNMIGPDGARALAS 257
Query: 127 -----------KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP 175
+ D G L + TL+ L S G+ G+ + L+ L+L G
Sbjct: 258 APLLSLNLHNNGIGDEGALALATSGTLKSLNASNNGIGDAGVLGFADNTVLTQLNLAGNM 317
Query: 176 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNI 230
+ R+L+ T L LDL +++ + GA VL L+ LNL G L
Sbjct: 318 IGPAGARALRRNTSLTELDLSTNRLGDAGAQVLAGSRSLTSLNLRHNEIGDDGTEALARN 377
Query: 231 SSLECLNLSF-------IQQVGAETDL-----------VLSLTALQNLNHLERLNLEQTQ 272
++L+ LNLS+ +G T L +AL L L+L +
Sbjct: 378 TTLKSLNLSYNPIGFWGAGALGGSTTLRELDLRCCAIDPYGASALARNTSLASLHLGSNR 437
Query: 273 VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 316
+ D L+T + L L L ++ D L+ LT+L++
Sbjct: 438 IGDDGARALATSRTLTLLDLSRNNIHDAGAQALAGNGSLTSLNL 481
>gi|46446775|ref|YP_008140.1| hypothetical protein pc1141 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400416|emb|CAF23865.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 194
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 76/142 (53%), Gaps = 6/142 (4%)
Query: 30 QRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRG--ENS--VDAEWMAY 85
R L L +L +++ L+ + + ++ KH + IE EN+ DA +A
Sbjct: 52 HRCQLNTLKNYLEFTVVSELLNQTSLLTEFEKILKHFSNEIEALNFSENTYLTDAHLLAL 111
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
G + L+ L++ C +T L LT +T L+ LDLS C K+TD G+ HL +++ L++L
Sbjct: 112 KGC-KNLKILHLEKCWDLTDDGLAHLTPLTSLQHLDLSSCKKLTDKGLAHLTTLTILQRL 170
Query: 146 WLSET-GLTADGIALLSSLQNL 166
LS LT DG+A L++L L
Sbjct: 171 DLSYCENLTKDGLAYLTTLTGL 192
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 38/61 (62%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+A+L L+ L+++ C+++T L LT +T L+ LDLS C +T G+ +L +++ L
Sbjct: 133 LAHLTPLTSLQHLDLSSCKKLTDKGLAHLTTLTILQRLDLSYCENLTKDGLAYLTTLTGL 192
Query: 143 E 143
+
Sbjct: 193 Q 193
>gi|421611905|ref|ZP_16053033.1| hypothetical protein RBSH_02839 [Rhodopirellula baltica SH28]
gi|408497310|gb|EKK01841.1| hypothetical protein RBSH_02839 [Rhodopirellula baltica SH28]
Length = 455
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 129/282 (45%), Gaps = 17/282 (6%)
Query: 43 DSLLRHLIRRRLIFPSLLEVFKHNAE--AIELRGENSVDAEWMAYLGAFRYLRSLNVADC 100
DS+ +RR + LE+ ++ AI+LR N DA M L + L + + +
Sbjct: 156 DSVQGLFLRRTGVTDEGLELLTGLSKLRAIDLRNSNIGDA-GMDSLAKIKTLADVQL-EK 213
Query: 101 RRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALL 160
+VT L LT + LK ++ + C + MK L TLE L + + + +A L
Sbjct: 214 SKVTDEGLVKLTSLP-LKSINFNYCTTINGPTMKMLGQTPTLENLQGDYSKINDESMAEL 272
Query: 161 SSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA 220
L L L + G VT ++ + L +L S V + G V+ P +++++++
Sbjct: 273 KGLSKLKRLRIRGCDVTGEGIQHIAGNKALARFELRDSSVDDDGLKVISQLPAVTYVDIS 332
Query: 221 W------TGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVS 274
G+ +L ++ L L L + + ET L+ +L +LE LNL+ T V+
Sbjct: 333 ECRLASPEGIAQLGELTGLTYLGL-WETKTNDET-----LSGFGDLINLEELNLKSTSVT 386
Query: 275 DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 316
D +L L +L L++ L D S +L+ L L ++++
Sbjct: 387 DESLPVLMKMIKLKTLNVAGTQLGDDSFLELAKLPNLKSMNV 428
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 108/234 (46%), Gaps = 9/234 (3%)
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
+ DAGM++L S+ L+ L L++T +T + + L ++ L L VTD L L L
Sbjct: 120 IDDAGMENLTSLPKLKYLTLADTAITDETLKTAGKLDSVQGLFLRRTGVTDEGLELLTGL 179
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK--LPNISS--LECLNLSFIQQ 243
+KL +DL S + + G L L+ + L + VT L ++S L+ +N ++
Sbjct: 180 SKLRAIDLRNSNIGDAGMDSLAKIKTLADVQLEKSKVTDEGLVKLTSLPLKSINFNYCTT 239
Query: 244 VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLH 303
+ T +L T LE L + ++++D ++ L +L L +R +T +
Sbjct: 240 INGPTMKMLGQTP-----TLENLQGDYSKINDESMAELKGLSKLKRLRIRGCDVTGEGIQ 294
Query: 304 QLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKM 357
++ L +RD+ + + GL ++ +D+ L + + I Q ++
Sbjct: 295 HIAGNKALARFELRDSSVDDDGLKVISQLPAVTYVDISECRLASPEGIAQLGEL 348
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 1/147 (0%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
V E + ++ + L + D V L ++ + + +D+S C + G+ L
Sbjct: 288 VTGEGIQHIAGNKALARFELRDSS-VDDDGLKVISQLPAVTYVDISECRLASPEGIAQLG 346
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
++ L L L ET + ++ L NL L+L VTD L L + KL+ L++ G
Sbjct: 347 ELTGLTYLGLWETKTNDETLSGFGDLINLEELNLKSTSVTDESLPVLMKMIKLKTLNVAG 406
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWTGV 224
+Q+ + L P L +N+A T +
Sbjct: 407 TQLGDDSFLELAKLPNLKSMNVANTSI 433
>gi|407859465|gb|EKG07051.1| hypothetical protein TCSYLVIO_001824 [Trypanosoma cruzi]
Length = 929
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 123/263 (46%), Gaps = 34/263 (12%)
Query: 100 CRRVTSSALWALTGMTC-----------LKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
CR V +L + ++C L++LDLS +VT+ GM +S L KL
Sbjct: 340 CRHVERLSLCMSSSVSCTRFLRHRSLCALRDLDLSY-TQVTEEGMYR--DVSKLNKL--- 393
Query: 149 ETGLTADGIALLSSLQ------NLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL-WGSQVS 201
+ L+ +G + SLQ L VL+LG VTD L +L+ +L LDL W +++
Sbjct: 394 -SRLSLEGCRKIESLQWLRALNQLRVLNLGYSSVTDDSLTALRFCPELAKLDLQWCGRIT 452
Query: 202 NRGAAVLKMFPRLSFLNLAWTGVTK--LPNISSLECLNLSFIQQVGAETDLVLSLTALQN 259
+ V + L LNL T VT L + L L ++ GA +DL L N
Sbjct: 453 SLKYLVGALCDSLRELNLTETSVTDEGLVPLKDFAALELISLEGCGAVSDL----NVLCN 508
Query: 260 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRD 318
L L +++ +T+V++ + LS + L + +R LTD + L +L +L + + D
Sbjct: 509 LTRLREMDVGRTRVTNRGVVSLSQCQALRVMRMRQCYRLTDANF--LGALQQLEEVDLSD 566
Query: 319 AVLTNSGLGSFKPPRSLKLLDLH 341
+TN G+ RSL+ L L
Sbjct: 567 CPVTNEGIAGLFGARSLRKLRLQ 589
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 100/216 (46%), Gaps = 27/216 (12%)
Query: 138 SISTLEKLWLSETGLTADGIAL-LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLW 196
S+ L L LS T +T +G+ +S L LS L L G + L+ L+ L +L L+L
Sbjct: 364 SLCALRDLDLSYTQVTEEGMYRDVSKLNKLSRLSLEGCRKIE-SLQWLRALNQLRVLNLG 422
Query: 197 GSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTA 256
S V++ L+ P L+ L+L W G I+SL+ L VGA D
Sbjct: 423 YSSVTDDSLTALRFCPELAKLDLQWCG-----RITSLKYL-------VGALCD------- 463
Query: 257 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 316
L LNL +T V+D L PL F L +SL L+ L +L++L + +
Sbjct: 464 -----SLRELNLTETSVTDEGLVPLKDFAALELISLEGCGAVS-DLNVLCNLTRLREMDV 517
Query: 317 RDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAIL 352
+TN G+ S ++L+++ + + LT+ L
Sbjct: 518 GRTRVTNRGVVSLSQCQALRVMRMRQCYRLTDANFL 553
Score = 41.2 bits (95), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 76/171 (44%), Gaps = 29/171 (16%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G V + L + LR + + C R+T + L + L+E+DLS C VT+ G+
Sbjct: 518 GRTRVTNRGVVSLSQCQALRVMRMRQCYRLTDANF--LGALQQLEEVDLSDC-PVTNEGI 574
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTD--------------- 178
L +L KL L +D + L L++L +LDL V +
Sbjct: 575 AGLFGARSLRKLRLQSCHAVSD-VNFLGGLEHLMLLDLHHTTVDEEGSVGLAQCPQLMTL 633
Query: 179 ----LVLRSLQ------VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL 219
+++ SLQ L +L+ LDL ++V++ + L+M P L L+L
Sbjct: 634 IMHSVLVHSLQQWNAALFLPRLKRLDLSTTKVTSDALSFLRMCPVLETLSL 684
>gi|283779449|ref|YP_003370204.1| hypothetical protein Psta_1669 [Pirellula staleyi DSM 6068]
gi|283437902|gb|ADB16344.1| hypothetical protein Psta_1669 [Pirellula staleyi DSM 6068]
Length = 633
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 75/136 (55%), Gaps = 2/136 (1%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G +V + +A LG F+ L+ L+++ +VT + L L +T L +L L ++ A +
Sbjct: 481 GRTTVTDQGLAQLGQFKRLKWLDLS-LTKVTDTGLEQLDQLTQLNQLFL-EGTAISSASI 538
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
+ + LE+L LS+ + D +A +++L+ L VL L G PVTD L L L LE L
Sbjct: 539 PAIARLRNLEELDLSKVNIADDDLAKIATLKQLKVLYLVGTPVTDAGLAKLVSLQNLEML 598
Query: 194 DLWGSQVSNRGAAVLK 209
DL G++VS A LK
Sbjct: 599 DLRGTRVSADAAEKLK 614
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 65/123 (52%), Gaps = 1/123 (0%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
VT L L LK LDLS KVTD G++ L ++ L +L+L T +++ I ++
Sbjct: 485 VTDQGLAQLGQFKRLKWLDLS-LTKVTDTGLEQLDQLTQLNQLFLEGTAISSASIPAIAR 543
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT 222
L+NL LDL + + D L + L +L+ L L G+ V++ G A L L L+L T
Sbjct: 544 LRNLEELDLSKVNIADDDLAKIATLKQLKVLYLVGTPVTDAGLAKLVSLQNLEMLDLRGT 603
Query: 223 GVT 225
V+
Sbjct: 604 RVS 606
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 31/153 (20%)
Query: 193 LDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVL 252
L L + V+++G A L F RL +L+L+ T VT
Sbjct: 478 LSLGRTTVTDQGLAQLGQFKRLKWLDLSLTKVTD-------------------------- 511
Query: 253 SLTALQNLNHLERLN---LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 309
T L+ L+ L +LN LE T +S A++ ++ + L L L ++ D L ++++L
Sbjct: 512 --TGLEQLDQLTQLNQLFLEGTAISSASIPAIARLRNLEELDLSKVNIADDDLAKIATLK 569
Query: 310 KLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 342
+L L + +T++GL ++L++LDL G
Sbjct: 570 QLKVLYLVGTPVTDAGLAKLVSLQNLEMLDLRG 602
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 73/150 (48%), Gaps = 7/150 (4%)
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
V+D + +S +T L L T +T G+A L + L LDL VTD L L L
Sbjct: 461 VSDQDLLACVSPATTINLSLGRTTVTDQGLAQLGQFKRLKWLDLSLTKVTDTGLEQLDQL 520
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT--KLPNISSLECLNLSFIQQVG 245
T+L L L G+ +S+ + L L+L+ + L I++L+ L + ++ VG
Sbjct: 521 TQLNQLFLEGTAISSASIPAIARLRNLEELDLSKVNIADDDLAKIATLKQLKVLYL--VG 578
Query: 246 AE-TDLVLSLTALQNLNHLERLNLEQTQVS 274
TD L L +L +LE L+L T+VS
Sbjct: 579 TPVTD--AGLAKLVSLQNLEMLDLRGTRVS 606
>gi|290976637|ref|XP_002671046.1| predicted protein [Naegleria gruberi]
gi|284084611|gb|EFC38302.1| predicted protein [Naegleria gruberi]
Length = 350
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 128/284 (45%), Gaps = 10/284 (3%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N + + + YL L LN++ C+ +T+ + ++ GM L L++S + D+G+
Sbjct: 34 GYNDIGYKAVEYLSKLEKLTILNISKCK-ITNLGIESMIGMKQLTSLEISEN-GIDDSGV 91
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
K L+ +S L KL + + +G +S ++NL+ L +G + + ++ + L +L L
Sbjct: 92 KSLIELSQLTKLDIDHNEIRTEGCKCISQMKNLTDLSVGLNGIDEEGIKFICELKQLTNL 151
Query: 194 DLWGSQ-VSNRGAAVLKMFPRLSFLNLA--WTGVTKLPNISSLECLNLSFIQQVGAETDL 250
Q VS G + +L LN+ W G IS ++ L ++ D
Sbjct: 152 SAHAIQIVSVDGVQSITSLKQLISLNIGDNWIGDAGAKVISEMKQLKTLYMHSTLIGIDG 211
Query: 251 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 310
S++ + NL L+ + + D +S +LI L + S+ + +S L K
Sbjct: 212 TKSISEMTNLTFLD---ISANNLGDEGAKLISGLNQLIKLWISEISIGNEGAESISKLEK 268
Query: 311 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQF 354
LT L + + G S + L LD+ ++ ED+ +++
Sbjct: 269 LTELDVHRNSIETEGAKSLSKLKHLTRLDISENFI--EDSGVKY 310
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 106/228 (46%), Gaps = 30/228 (13%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N +D E + ++ + L +L+ + V+ + ++T + L L++ + DAG
Sbjct: 130 GLNGIDEEGIKFICELKQLTNLSAHAIQIVSVDGVQSITSLKQLISLNIGDNW-IGDAGA 188
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
K + + L+ L++ T + DG +S + NL+ LD+ + D + + L +L +
Sbjct: 189 KVISEMKQLKTLYMHSTLIGIDGTKSISEMTNLTFLDISANNLGDEGAKLISGLNQL--I 246
Query: 194 DLWGSQVS--NRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLV 251
LW S++S N GA + +L+ L++ + ET+
Sbjct: 247 KLWISEISIGNEGAESISKLEKLTELDVHRNSI----------------------ETEGA 284
Query: 252 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 299
SL+ L+ HL RL++ + + D+ + LS K+L HL++ + + +
Sbjct: 285 KSLSKLK---HLTRLDISENFIEDSGVKYLSKMKKLKHLNVYDNGIDN 329
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 120/283 (42%), Gaps = 18/283 (6%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + +E +G L L++ + A+ L+ + L L++S+C K+T+ G++
Sbjct: 12 NVISSEATQSIGNLINLTELSIG-YNDIGYKAVEYLSKLEKLTILNISKC-KITNLGIES 69
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
++ + L L +SE G+ G+ L L L+ LD+ + + + + L L +
Sbjct: 70 MIGMKQLTSLEISENGIDDSGVKSLIELSQLTKLDIDHNEIRTEGCKCISQMKNLTDLSV 129
Query: 196 WGSQVSNRGAAVLKMFPRLSFLN------LAWTGVTKLPNISSLECLNL--SFIQQVGAE 247
+ + G + +L+ L+ ++ GV + ++ L LN+ ++I GA+
Sbjct: 130 GLNGIDEEGIKFICELKQLTNLSAHAIQIVSVDGVQSITSLKQLISLNIGDNWIGDAGAK 189
Query: 248 TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 307
+ + L+ L + T + +S L L + +L D +S
Sbjct: 190 --------VISEMKQLKTLYMHSTLIGIDGTKSISEMTNLTFLDISANNLGDEGAKLISG 241
Query: 308 LSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 350
L++L L I + + N G S L LD+H + TE A
Sbjct: 242 LNQLIKLWISEISIGNEGAESISKLEKLTELDVHRNSIETEGA 284
>gi|320168649|gb|EFW45548.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 977
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 123/291 (42%), Gaps = 33/291 (11%)
Query: 77 SVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLS--RCVKVTDAGMK 134
S+ A L A YL V ++S + A TG++ LKE+DLS R + + A
Sbjct: 96 SISANAFTGLSALTYL----VLKENEISSISANAFTGLSALKEVDLSNNRIIDLPTAAFA 151
Query: 135 HLLSISTL----------------------EKLWLSETGLTADGIALLSSLQNLSVLDLG 172
L +STL ++L+L +++ A + L+ L L
Sbjct: 152 GLPQMSTLRLSRNQFNSIPSTAITTGLTALKELYLDANNISSISTAAFTGFPALTYLYLA 211
Query: 173 GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN--I 230
P+TD+ + LT+L +L L +Q+S+ A L++L+L+ ++ L
Sbjct: 212 DNPITDIPANTFADLTELRHLYLRNNQISSVSATAFAGLSALNYLDLSMNKISSLSASVF 271
Query: 231 SSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 290
+ L L++ ++Q + S T L L HL L Q ++ + LI L
Sbjct: 272 TGLTALSILYLQSNQLSSIPASSFTDLAALQHLY---LSSNQFTNLPAAAFTGLDALIVL 328
Query: 291 SLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 341
L LT V L+SLS L NL + +T+ +F +L +L LH
Sbjct: 329 WLSGNPLTSVPTSALTSLSALRNLDLSSTKITSISANAFAGLNALTVLALH 379
>gi|332238073|ref|XP_003268227.1| PREDICTED: F-box/LRR-repeat protein 13 isoform 1 [Nomascus
leucogenys]
Length = 735
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 136/286 (47%), Gaps = 21/286 (7%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLK--ELDLSRCVKVTDAGMKHLL-SISTLEK 144
F L++L++A CRR T L L G C K LDLS C +++ G +++ S + +
Sbjct: 295 FHNLQNLSLAYCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGIMH 354
Query: 145 LWLSETGLTADGI--ALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQ-V 200
L +++ D AL+ ++ L G P ++D ++L KL + G++ V
Sbjct: 355 LTINDMPTLTDNCVKALVEKCSRITSLVFTGAPHISDCTFKALST-CKLRKIRFEGNRRV 413
Query: 201 SNRGAAVL-KMFPRLSFLNLA-WTGVT-----KLPNISSLECLNLSFIQQVGAETDLVLS 253
++ + K +P LS + +A G+T L + L LNL+ ++G + L
Sbjct: 414 TDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIG-DMGLKQF 472
Query: 254 LTALQNLNHLERLNLEQ-TQVSDATLFPLST-FKELIHLSLRNAS-LTDVSLHQLSSLSK 310
L ++ + LNL Q+SDA++ LS L +LSLRN LT + + ++
Sbjct: 473 LDGPASI-RIRELNLSNCVQLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNIFS 531
Query: 311 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 356
L ++ + ++N GL + LK L + + +T+D I FCK
Sbjct: 532 LVSIDLSGTDISNEGLNVLSRHKKLKELSVSECYRITDDGIQAFCK 577
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 110/236 (46%), Gaps = 19/236 (8%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV 128
I G V DA + + L + +ADC+ +T S+L +L+ + L L+L+ CV++
Sbjct: 405 IRFEGNRRVTDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRI 464
Query: 129 TDAGMKHLLSIST---LEKLWLSETGLTADG--IALLSSLQNLSVLDLGGLP-VTDLVLR 182
D G+K L + +L LS +D + L NL+ L L +T +
Sbjct: 465 GDMGLKQFLDGPASIRIRELNLSNCVQLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIG 524
Query: 183 SLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT------GVTKLPNIS-SLEC 235
+ + L +DL G+ +SN G VL +L L+++ G+ S LE
Sbjct: 525 YIVNIFSLVSIDLSGTDISNEGLNVLSRHKKLKELSVSECYRITDDGIQAFCKSSLILEH 584
Query: 236 LNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHL 290
L++S+ Q+ +D+++ A+ +N L L++ +++D+ + LS +H+
Sbjct: 585 LDVSYCSQL---SDMIIKALAIYCIN-LTSLSIAGCPKITDSAMETLSAKCHYLHI 636
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 120/254 (47%), Gaps = 44/254 (17%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLW--LSETGLTADGIALL----SSLQNLSVLD 170
L+EL++S C TD M+H +S L L+ LS T +T + LL +LQNLS+
Sbjct: 247 LQELNVSDCPTFTDESMRH-ISEGCLGVLYLNLSNTTITNRTMRLLPRHFHNLQNLSLAY 305
Query: 171 LGGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWTGVTK 226
TD L+ L + KL YLDL G +Q+S +G ++ + TG+
Sbjct: 306 CRRF--TDKGLQYLNLGNGCHKLIYLDLSGCTQISVQG---------FRYIANSCTGIMH 354
Query: 227 L-----PNISSLECLNLSFIQQVGAETDLVL---------SLTALQNLNHLERLNLE-QT 271
L P ++ C+ + +++ T LV + AL L ++ E
Sbjct: 355 LTINDMPTLTD-NCVK-ALVEKCSRITSLVFTGAPHISDCTFKALSTCK-LRKIRFEGNR 411
Query: 272 QVSDATL-FPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGS 328
+V+DA+ F + L H+ + + +TD SL LS L +LT L++ + V + + GL
Sbjct: 412 RVTDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGLKQ 471
Query: 329 F-KPPRSLKLLDLH 341
F P S+++ +L+
Sbjct: 472 FLDGPASIRIRELN 485
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 88/183 (48%), Gaps = 21/183 (11%)
Query: 69 AIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMT-CLKELDLSRCVK 127
+I+L G + + E + L + L+ L+V++C R+T + A + L+ LD+S C +
Sbjct: 534 SIDLSGTD-ISNEGLNVLSRHKKLKELSVSECYRITDDGIQAFCKSSLILEHLDVSYCSQ 592
Query: 128 VTDAGMKHLLSISTLEKLWLSETG---LTADGIALLSS-LQNLSVLDLGG-LPVTDLVLR 182
++D +K L+I + LS G +T + LS+ L +LD+ G + +TD +L
Sbjct: 593 LSDMIIK-ALAIYCINLTSLSIAGCPKITDSAMETLSAKCHYLHILDISGCVLLTDQILE 651
Query: 183 SLQV------LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTG-------VTKLPN 229
LQ+ + K++Y + + R ++ ++ S W G VT L N
Sbjct: 652 DLQIGCKQLRILKMQYCTNISKKAAQRMSSKVQQQEYNSNDPPRWFGYDREGNPVTGLDN 711
Query: 230 ISS 232
I+S
Sbjct: 712 ITS 714
>gi|326922167|ref|XP_003207323.1| PREDICTED: f-box/LRR-repeat protein 2-like [Meleagris gallopavo]
Length = 473
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 161/342 (47%), Gaps = 26/342 (7%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC-LKELDLSRCVK 127
+ LRG + V D+ + R + LN+ C ++T S ++L+ LK LDL+ CV
Sbjct: 133 LSLRGCHVVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVA 192
Query: 128 VTDAGMKHLL-SISTLEKLWLSETG-LTADGI-ALLSSLQNLSVLDLGGLP-VTDLVLRS 183
+T++ +K L LE L LS +T DGI AL+ L L L G + D L+
Sbjct: 193 ITNSSLKGLSEGCRNLEHLNLSWCDQITKDGIEALVKGCSGLKALFLRGCTQLEDEALKH 252
Query: 184 LQV-LTKLEYLDLWG-SQVSNRG-AAVLKMFPRLSFLNLAWTGVTKLPNIS----SLECL 236
+Q +L L+L +Q+S+ G + + RL +L +G L + S L C
Sbjct: 253 IQNHCHELAILNLQSCTQISDEGIVKICRGCHRLQ--SLCVSGCCNLTDASLTALGLNCP 310
Query: 237 NLSFIQQVGAE--TDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTF-KELIHLSL 292
L ++ TD +L A +N + LE+++LE+ ++D+TL LS +L LSL
Sbjct: 311 RLKILEAARCSQLTDAGFTLLA-RNCHELEKMDLEECVLITDSTLIQLSIHCPKLQALSL 369
Query: 293 RNASL-TDVSLHQLSSLS----KLTNLSIRDAVL-TNSGLGSFKPPRSLKLLDLHGGWLL 346
+ L TD + LS+ + +L L + + +L T+ L + +L+ ++L+ +
Sbjct: 370 SHCELITDDGILHLSNSTCGHERLQVLELDNCLLITDVTLEHLENCHNLERIELYDCQQV 429
Query: 347 TEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSL 388
T I + P ++V + + P +G +G R +
Sbjct: 430 TRAGIKRIRAHRPHVKVHAYFAPVTPPPSVGGSGQRLCRCCI 471
>gi|161333852|ref|NP_659469.3| F-box/LRR-repeat protein 13 isoform 1 [Homo sapiens]
gi|311033450|sp|Q8NEE6.3|FXL13_HUMAN RecName: Full=F-box/LRR-repeat protein 13; AltName: Full=F-box and
leucine-rich repeat protein 13
Length = 735
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 136/286 (47%), Gaps = 21/286 (7%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLK--ELDLSRCVKVTDAGMKHLL-SISTLEK 144
F L++L++A CRR T L L G C K LDLS C +++ G +++ S + +
Sbjct: 295 FHNLQNLSLAYCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGIMH 354
Query: 145 LWLSETGLTADGI--ALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQ-V 200
L +++ D AL+ ++ L G P ++D R+L KL + G++ V
Sbjct: 355 LTINDMPTLTDNCVKALVEKCSRITSLVFTGAPHISDCTFRALSA-CKLRKIRFEGNKRV 413
Query: 201 SNRGAAVL-KMFPRLSFLNLA-WTGVT-----KLPNISSLECLNLSFIQQVGAETDLVLS 253
++ + K +P LS + +A G+T L + L LNL+ ++G + L
Sbjct: 414 TDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIG-DMGLKQF 472
Query: 254 LTALQNLNHLERLNLEQ-TQVSDATLFPLST-FKELIHLSLRNAS-LTDVSLHQLSSLSK 310
L ++ + LNL ++SDA++ LS L +LSLRN LT + + ++
Sbjct: 473 LDGPASM-RIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNIFS 531
Query: 311 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 356
L ++ + ++N GL + LK L + + +T+D I FCK
Sbjct: 532 LVSIDLSGTDISNEGLNVLSRHKKLKELSVSECYRITDDGIQAFCK 577
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 111/236 (47%), Gaps = 19/236 (8%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV 128
I G V DA + + L + +ADC+ +T S+L +L+ + L L+L+ CV++
Sbjct: 405 IRFEGNKRVTDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRI 464
Query: 129 TDAGMKHLL---SISTLEKLWLSETGLTADG--IALLSSLQNLSVLDLGGLP-VTDLVLR 182
D G+K L + + +L LS +D + L NL+ L L +T +
Sbjct: 465 GDMGLKQFLDGPASMRIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIG 524
Query: 183 SLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT------GVTKLPNIS-SLEC 235
+ + L +DL G+ +SN G VL +L L+++ G+ S LE
Sbjct: 525 YIVNIFSLVSIDLSGTDISNEGLNVLSRHKKLKELSVSECYRITDDGIQAFCKSSLILEH 584
Query: 236 LNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHL 290
L++S+ Q+ +D+++ A+ +N L L++ +++D+ + LS +H+
Sbjct: 585 LDVSYCSQL---SDMIIKALAIYCIN-LTSLSIAGCPKITDSAMEMLSAKCHYLHI 636
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 90/183 (49%), Gaps = 21/183 (11%)
Query: 69 AIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMT-CLKELDLSRCVK 127
+I+L G + + E + L + L+ L+V++C R+T + A + L+ LD+S C +
Sbjct: 534 SIDLSGTD-ISNEGLNVLSRHKKLKELSVSECYRITDDGIQAFCKSSLILEHLDVSYCSQ 592
Query: 128 VTDAGMKHLLSISTLEKLWLSETG---LTADGIALLSS-LQNLSVLDLGG-LPVTDLVLR 182
++D +K L+I + LS G +T + +LS+ L +LD+ G + +TD +L
Sbjct: 593 LSDMIIK-ALAIYCINLTSLSIAGCPKITDSAMEMLSAKCHYLHILDISGCVLLTDQILE 651
Query: 183 SLQV------LTKLEYLDLWGSQVSNRGAAVLKMF-------PRLSFLNLAWTGVTKLPN 229
LQ+ + K++Y + + R ++ ++ PR + VT+L N
Sbjct: 652 DLQIGCKQLRILKMQYCTNISKKAAQRMSSKVQQQEYNTNDPPRWFGYDREGNPVTELDN 711
Query: 230 ISS 232
I+S
Sbjct: 712 ITS 714
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 120/256 (46%), Gaps = 48/256 (18%)
Query: 117 LKELDLSRCVKVTDAGMKHLL-SISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 171
L+EL++S C TD M+H+ + L LS T +T + LL +LQNLS+
Sbjct: 247 LQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQNLSLAYC 306
Query: 172 GGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWTGVTKL 227
TD L+ L + KL YLDL G +Q+S +G ++ + TG+ L
Sbjct: 307 RRF--TDKGLQYLNLGNGCHKLIYLDLSGCTQISVQG---------FRYIANSCTGIMHL 355
Query: 228 -----PNISSLECLNLSFIQQVGAETDLVLS------------LTALQNLNHLERLNLE- 269
P ++ C+ + +++ T LV + L+A + L ++ E
Sbjct: 356 TINDMPTLTD-NCVK-ALVEKCSRITSLVFTGAPHISDCTFRALSACK----LRKIRFEG 409
Query: 270 QTQVSDATL-FPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGL 326
+V+DA+ F + L H+ + + +TD SL LS L +LT L++ + V + + GL
Sbjct: 410 NKRVTDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGL 469
Query: 327 GSF-KPPRSLKLLDLH 341
F P S+++ +L+
Sbjct: 470 KQFLDGPASMRIRELN 485
>gi|21757336|dbj|BAC05092.1| unnamed protein product [Homo sapiens]
gi|119603710|gb|EAW83304.1| F-box and leucine-rich repeat protein 13, isoform CRA_g [Homo
sapiens]
Length = 735
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 136/286 (47%), Gaps = 21/286 (7%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLK--ELDLSRCVKVTDAGMKHLL-SISTLEK 144
F L++L++A CRR T L L G C K LDLS C +++ G +++ S + +
Sbjct: 295 FHNLQNLSLAYCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGIMH 354
Query: 145 LWLSETGLTADGI--ALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQ-V 200
L +++ D AL+ ++ L G P ++D R+L KL + G++ V
Sbjct: 355 LTINDMPTLTDNCVKALVEKCSRITSLVFTGAPHISDCTFRALSA-CKLRKIRFEGNKRV 413
Query: 201 SNRGAAVL-KMFPRLSFLNLA-WTGVT-----KLPNISSLECLNLSFIQQVGAETDLVLS 253
++ + K +P LS + +A G+T L + L LNL+ ++G + L
Sbjct: 414 TDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIG-DMGLKQF 472
Query: 254 LTALQNLNHLERLNLEQ-TQVSDATLFPLST-FKELIHLSLRNAS-LTDVSLHQLSSLSK 310
L ++ + LNL ++SDA++ LS L +LSLRN LT + + ++
Sbjct: 473 LDGPASM-RIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNIFS 531
Query: 311 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 356
L ++ + ++N GL + LK L + + +T+D I FCK
Sbjct: 532 LVSIDLSGTDISNEGLNVLSRHKKLKELSVSECYRITDDGIQAFCK 577
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 111/236 (47%), Gaps = 19/236 (8%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV 128
I G V DA + + L + +ADC+ +T S+L +L+ + L L+L+ CV++
Sbjct: 405 IRFEGNKRVTDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRI 464
Query: 129 TDAGMKHLL---SISTLEKLWLSETGLTADG--IALLSSLQNLSVLDLGGLP-VTDLVLR 182
D G+K L + + +L LS +D + L NL+ L L +T +
Sbjct: 465 GDMGLKQFLDGPASMRIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIG 524
Query: 183 SLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT------GVTKLPNIS-SLEC 235
+ + L +DL G+ +SN G VL +L L+++ G+ S LE
Sbjct: 525 YIVNIFSLVSIDLSGTDISNEGLNVLSRHKKLKELSVSECYRITDDGIQAFCKSSLILEH 584
Query: 236 LNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHL 290
L++S+ Q+ +D+++ A+ +N L L++ +++D+ + LS +H+
Sbjct: 585 LDVSYCSQL---SDMIIKALAIYCIN-LTSLSIAGCPKITDSAMEMLSAKCHYLHI 636
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 90/183 (49%), Gaps = 21/183 (11%)
Query: 69 AIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMT-CLKELDLSRCVK 127
+I+L G + + E + L + L+ L+V++C R+T + A + L+ LD+S C +
Sbjct: 534 SIDLSGTD-ISNEGLNVLSRHKKLKELSVSECYRITDDGIQAFCKSSLILEHLDVSYCSQ 592
Query: 128 VTDAGMKHLLSISTLEKLWLSETG---LTADGIALLSS-LQNLSVLDLGG-LPVTDLVLR 182
++D +K L+I + LS G +T + +LS+ L +LD+ G + +TD +L
Sbjct: 593 LSDMIIK-ALAIYCINLTSLSIAGCPKITDSAMEMLSAKCHYLHILDISGCVLLTDQILE 651
Query: 183 SLQV------LTKLEYLDLWGSQVSNRGAAVLKMF-------PRLSFLNLAWTGVTKLPN 229
LQ+ + K++Y + + R ++ ++ PR + VT+L N
Sbjct: 652 DLQIGCKQLRILKMQYCTNISKKAAQRMSSKVQQQEYNTNDPPRWFGYDREGNPVTELDN 711
Query: 230 ISS 232
I+S
Sbjct: 712 ITS 714
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 120/256 (46%), Gaps = 48/256 (18%)
Query: 117 LKELDLSRCVKVTDAGMKHLL-SISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 171
L+EL++S C TD M+H+ + L LS T +T + LL +LQNLS+
Sbjct: 247 LQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQNLSLAYC 306
Query: 172 GGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWTGVTKL 227
TD L+ L + KL YLDL G +Q+S +G ++ + TG+ L
Sbjct: 307 RRF--TDKGLQYLNLGNGCHKLIYLDLSGCTQISVQG---------FRYIANSCTGIMHL 355
Query: 228 -----PNISSLECLNLSFIQQVGAETDLVLS------------LTALQNLNHLERLNLE- 269
P ++ C+ + +++ T LV + L+A + L ++ E
Sbjct: 356 TINDMPTLTD-NCVK-ALVEKCSRITSLVFTGAPHISDCTFRALSACK----LRKIRFEG 409
Query: 270 QTQVSDATL-FPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGL 326
+V+DA+ F + L H+ + + +TD SL LS L +LT L++ + V + + GL
Sbjct: 410 NKRVTDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGL 469
Query: 327 GSF-KPPRSLKLLDLH 341
F P S+++ +L+
Sbjct: 470 KQFLDGPASMRIRELN 485
>gi|431930507|ref|YP_007243553.1| TIR domain-containing protein [Thioflavicoccus mobilis 8321]
gi|431828810|gb|AGA89923.1| TIR domain-containing protein [Thioflavicoccus mobilis 8321]
Length = 1283
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 111/236 (47%), Gaps = 36/236 (15%)
Query: 99 DCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIA 158
DC A+ L + CL+ LD S K+++ G L ++ L+ L S T + AD +
Sbjct: 80 DCHPNQLDAISTLGFLPCLRRLDCSG-AKLSNLGF--LAGLTALQYLKCSSTQV-AD-LT 134
Query: 159 LLSSLQNLSVLDLGGLPVTDLV-------LRSLQV-------------LTKLEYLDLWGS 198
L+ L NL LD G PVTDL LRSL LT L+ LD +
Sbjct: 135 PLAGLTNLQALDCGCTPVTDLTPLAGLTNLRSLDCAYTPVAGLEPLADLTTLKSLDCRHT 194
Query: 199 QVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQ 258
+V++ A L L FL+ T V L ++SL NL + G V+ LT L
Sbjct: 195 RVAD--LAPLAGLTELQFLDCGDTRVADLEPVASLA--NLQSLDCGGTR---VVDLTPLA 247
Query: 259 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 314
L +L+ L+ TQV+D L PL++ L L R+A +TD L L+SL L +L
Sbjct: 248 GLANLQALDCGFTQVAD--LAPLASLTNLQSLDCRSAPVTD--LGPLASLGNLQSL 299
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 108/233 (46%), Gaps = 18/233 (7%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+A L L +L DC + L L G+T L+ LD C AG++ L ++TL
Sbjct: 130 VADLTPLAGLTNLQALDCGCTPVTDLTPLAGLTNLRSLD---CAYTPVAGLEPLADLTTL 186
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
+ L T + AD +A L+ L L LD G V D L + L L+ LD G++V +
Sbjct: 187 KSLDCRHTRV-AD-LAPLAGLTELQFLDCGDTRVAD--LEPVASLANLQSLDCGGTRVVD 242
Query: 203 RGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNH 262
L L L+ +T V L ++S L+ +Q + + V L L +L +
Sbjct: 243 --LTPLAGLANLQALDCGFTQVADLAPLAS-----LTNLQSLDCRSAPVTDLGPLASLGN 295
Query: 263 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLS 315
L+ L + T V+D L PL+ L+ L+ N + D L L+S+ L +L+
Sbjct: 296 LQSLICQFTPVAD--LAPLAGLTNLLSLNCWNTPVID--LAPLASIGNLQSLN 344
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 101/238 (42%), Gaps = 40/238 (16%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
LG L +L C+ + L L G+T L L+ C + L SI L+ L
Sbjct: 287 LGPLASLGNLQSLICQFTPVADLAPLAGLTNLLSLN---CWNTPVIDLAPLASIGNLQSL 343
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
S T + AD +A L+ L NL L+ G PVTDL L LT L LD G+ V++ G
Sbjct: 344 NCSSTPV-AD-LASLAGLTNLRSLECAGSPVTDLA--PLAGLTNLRSLDCEGTPVADLGP 399
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
+ L N+ SL+C F + V L L L +L+
Sbjct: 400 LI------------------NLTNLRSLDC---GFTR--------VTDLAPLAGLTNLQS 430
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
L QT V+D L PL+ L + N +TD L L+ L+ + +L + ++N
Sbjct: 431 LICRQTPVAD--LAPLAALNNLQSFACGNTRITD--LTPLADLANMESLDCGETPISN 484
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 98/229 (42%), Gaps = 33/229 (14%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
L +L DCR + L L G+T L+ LD C A ++ + S++ L+ L T
Sbjct: 183 LTTLKSLDCRHTRVADLAPLAGLTELQFLD---CGDTRVADLEPVASLANLQSLDCGGTR 239
Query: 152 LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF 211
+ + L+ L NL LD G V DL L LT L+ LD + V++ G L
Sbjct: 240 VV--DLTPLAGLANLQALDCGFTQVADLA--PLASLTNLQSLDCRSAPVTDLGP--LASL 293
Query: 212 PRLSFLNLAWTGVTKLP------NISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L +T V L N+ SL C N V+ L L ++ +L+
Sbjct: 294 GNLQSLICQFTPVADLAPLAGLTNLLSLNCWNTP-----------VIDLAPLASIGNLQS 342
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 314
LN T V+D L L+ L L + +TD L+ L+ LTNL
Sbjct: 343 LNCSSTPVAD--LASLAGLTNLRSLECAGSPVTD-----LAPLAGLTNL 384
>gi|34785062|gb|AAH20572.2| FBXL13 protein, partial [Homo sapiens]
Length = 569
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 136/286 (47%), Gaps = 21/286 (7%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLK--ELDLSRCVKVTDAGMKHLL-SISTLEK 144
F L++L++A CRR T L L G C K LDLS C +++ G +++ S + +
Sbjct: 129 FHNLQNLSLAYCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGIMH 188
Query: 145 LWLSETGLTADGI--ALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQ-V 200
L +++ D AL+ ++ L G P ++D R+L KL + G++ V
Sbjct: 189 LTINDMPTLTDNCVKALVEKCSRITSLVFTGAPHISDCTFRALSA-CKLRKIRFEGNKRV 247
Query: 201 SNRGAAVL-KMFPRLSFLNLA-WTGVT-----KLPNISSLECLNLSFIQQVGAETDLVLS 253
++ + K +P LS + +A G+T L + L LNL+ ++G + L
Sbjct: 248 TDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIG-DMGLKQF 306
Query: 254 LTALQNLNHLERLNLEQ-TQVSDATLFPLST-FKELIHLSLRNAS-LTDVSLHQLSSLSK 310
L ++ + LNL ++SDA++ LS L +LSLRN LT + + ++
Sbjct: 307 LDGPASM-RIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNIFS 365
Query: 311 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 356
L ++ + ++N GL + LK L + + +T+D I FCK
Sbjct: 366 LVSIDLSGTDISNEGLNVLSRHKKLKELSVSECYRITDDGIQAFCK 411
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 110/236 (46%), Gaps = 19/236 (8%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV 128
I G V DA + + L + +ADC+ +T S+L +L+ + L L+L+ CV++
Sbjct: 239 IRFEGNKRVTDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRI 298
Query: 129 TDAGMKHLLSIST---LEKLWLSETGLTADG--IALLSSLQNLSVLDLGGLP-VTDLVLR 182
D G+K L + +L LS +D + L NL+ L L +T +
Sbjct: 299 GDMGLKQFLDGPASMRIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIG 358
Query: 183 SLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT------GVTKLPNIS-SLEC 235
+ + L +DL G+ +SN G VL +L L+++ G+ S LE
Sbjct: 359 YIVNIFSLVSIDLSGTDISNEGLNVLSRHKKLKELSVSECYRITDDGIQAFCKSSLILEH 418
Query: 236 LNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHL 290
L++S+ Q+ +D+++ A+ +N L L++ +++D+ + LS +H+
Sbjct: 419 LDVSYCSQL---SDMIIKALAIYCIN-LTSLSIAGCPKITDSAMEMLSAKCHYLHI 470
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 90/183 (49%), Gaps = 21/183 (11%)
Query: 69 AIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMT-CLKELDLSRCVK 127
+I+L G + + E + L + L+ L+V++C R+T + A + L+ LD+S C +
Sbjct: 368 SIDLSGTD-ISNEGLNVLSRHKKLKELSVSECYRITDDGIQAFCKSSLILEHLDVSYCSQ 426
Query: 128 VTDAGMKHLLSISTLEKLWLSETG---LTADGIALLSS-LQNLSVLDLGG-LPVTDLVLR 182
++D +K L+I + LS G +T + +LS+ L +LD+ G + +TD +L
Sbjct: 427 LSDMIIK-ALAIYCINLTSLSIAGCPKITDSAMEMLSAKCHYLHILDISGCVLLTDQILE 485
Query: 183 SLQV------LTKLEYLDLWGSQVSNRGAAVLKMF-------PRLSFLNLAWTGVTKLPN 229
LQ+ + K++Y + + R ++ ++ PR + VT+L N
Sbjct: 486 DLQIGCKQLRILKMQYCTNISKKAAQRMSSKVQQQEYNTNDPPRWFGYDREGNPVTELDN 545
Query: 230 ISS 232
I+S
Sbjct: 546 ITS 548
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 130/279 (46%), Gaps = 50/279 (17%)
Query: 117 LKELDLSRCVKVTDAGMKHLL-SISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 171
L+EL++S C TD M+H+ + L LS T +T + LL +LQNLS+
Sbjct: 81 LQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQNLSLAYC 140
Query: 172 GGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWTGVTKL 227
TD L+ L + KL YLDL G +Q+S +G ++ + TG+ L
Sbjct: 141 RRF--TDKGLQYLNLGNGCHKLIYLDLSGCTQISVQG---------FRYIANSCTGIMHL 189
Query: 228 -----PNISSLECLNLSFIQQVGAETDLVLS------------LTALQNLNHLERLNLE- 269
P ++ C+ + +++ T LV + L+A + L ++ E
Sbjct: 190 TINDMPTLTD-NCVK-ALVEKCSRITSLVFTGAPHISDCTFRALSACK----LRKIRFEG 243
Query: 270 QTQVSDATL-FPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGL 326
+V+DA+ F + L H+ + + +TD SL LS L +LT L++ + V + + GL
Sbjct: 244 NKRVTDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGL 303
Query: 327 GSF-KPPRSLKL--LDLHGGWLLTEDAILQFCKMHPRIE 362
F P S+++ L+L L++ ++++ + P +
Sbjct: 304 KQFLDGPASMRIRELNLSNCVRLSDASVMKLSERCPNLN 342
>gi|430746800|ref|YP_007205929.1| hypothetical protein Sinac_6131 [Singulisphaera acidiphila DSM
18658]
gi|430018520|gb|AGA30234.1| hypothetical protein Sinac_6131 [Singulisphaera acidiphila DSM
18658]
Length = 270
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 68/127 (53%), Gaps = 5/127 (3%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 176
++ L L R ++DA M HL ++ LE L+ + +T G+ + L L L L G+P+
Sbjct: 116 IRTLTLGRDPSISDADMVHLKGMADLEALFFDKGKITGAGLENFAGLPKLHTLSLQGIPL 175
Query: 177 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNIS 231
TD LR L+ LT + L L ++++ G LK L F++L TGVT L ++S
Sbjct: 176 TDGDLRPLEALTNPDALTLDSPRITDVGLVHLKHLVPLRFISLNETGVTGAGLGNLADMS 235
Query: 232 SLECLNL 238
+LE L L
Sbjct: 236 NLEILYL 242
>gi|343960280|dbj|BAK63994.1| F-box/LRR-repeat protein 13 [Pan troglodytes]
gi|343961615|dbj|BAK62397.1| F-box/LRR-repeat protein 13 [Pan troglodytes]
Length = 473
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 136/286 (47%), Gaps = 21/286 (7%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLK--ELDLSRCVKVTDAGMKHLL-SISTLEK 144
F L++L++A CRR T L L G C K LDLS C +++ G +++ S + +
Sbjct: 33 FHNLQNLSLAYCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYISNSCTGIMH 92
Query: 145 LWLSETGLTADGI--ALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQ-V 200
L +++ D AL+ ++ L G P ++D R+L KL + G++ V
Sbjct: 93 LTINDMPTLTDNCVKALVEKCSRITSLVFTGAPHISDCTFRALSA-CKLRKIRFEGNKRV 151
Query: 201 SNRGAAVL-KMFPRLSFLNLA-WTGVT-----KLPNISSLECLNLSFIQQVGAETDLVLS 253
++ + K +P LS + +A G+T L + L LNL+ ++G + L
Sbjct: 152 TDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIG-DMGLKQF 210
Query: 254 LTALQNLNHLERLNLEQ-TQVSDATLFPLST-FKELIHLSLRNAS-LTDVSLHQLSSLSK 310
L ++ + LNL ++SDA++ LS L +LSLRN LT + + ++
Sbjct: 211 LDGPASIK-IRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNIFS 269
Query: 311 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 356
L ++ + ++N GL + LK L + + +T+D I FCK
Sbjct: 270 LVSIDLSGTDISNEGLNVLSRHKKLKELSVSECYRITDDGIQAFCK 315
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 112/237 (47%), Gaps = 21/237 (8%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV 128
I G V DA + + L + +ADC+ +T S+L +L+ + L L+L+ CV++
Sbjct: 143 IRFEGNKRVTDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRI 202
Query: 129 TDAGMKHLL----SISTLEKLWLSETGLTADG--IALLSSLQNLSVLDLGGLP-VTDLVL 181
D G+K L SI + +L LS +D + L NL+ L L +T +
Sbjct: 203 GDMGLKQFLDGPASIK-IRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGI 261
Query: 182 RSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT------GVTKLPNIS-SLE 234
+ + L +DL G+ +SN G VL +L L+++ G+ S LE
Sbjct: 262 GYIVNIFSLVSIDLSGTDISNEGLNVLSRHKKLKELSVSECYRITDDGIQAFCKSSLILE 321
Query: 235 CLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHL 290
L++S+ Q+ +D+++ A+ +N L L++ +++D+ + LS +H+
Sbjct: 322 HLDVSYCSQL---SDMIIKALAIYCIN-LTSLSIAGCPKITDSAMEMLSAKCHYLHI 374
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 90/183 (49%), Gaps = 21/183 (11%)
Query: 69 AIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMT-CLKELDLSRCVK 127
+I+L G + + E + L + L+ L+V++C R+T + A + L+ LD+S C +
Sbjct: 272 SIDLSGTD-ISNEGLNVLSRHKKLKELSVSECYRITDDGIQAFCKSSLILEHLDVSYCSQ 330
Query: 128 VTDAGMKHLLSISTLEKLWLSETG---LTADGIALLSS-LQNLSVLDLGG-LPVTDLVLR 182
++D +K L+I + LS G +T + +LS+ L +LD+ G + +TD +L
Sbjct: 331 LSDMIIK-ALAIYCINLTSLSIAGCPKITDSAMEMLSAKCHYLHILDISGCVLLTDQILE 389
Query: 183 SLQV------LTKLEYLDLWGSQVSNRGAAVLKMF-------PRLSFLNLAWTGVTKLPN 229
LQ+ + K++Y + + R ++ ++ PR + VT+L N
Sbjct: 390 DLQIGCKQLRILKMQYCTNISKKAAQRMSSKVQQQEYNTNDPPRWFGYDREGNPVTELDN 449
Query: 230 ISS 232
I+S
Sbjct: 450 ITS 452
>gi|114615213|ref|XP_001157967.1| PREDICTED: F-box/LRR-repeat protein 13 isoform 2 [Pan troglodytes]
gi|397466177|ref|XP_003804844.1| PREDICTED: F-box/LRR-repeat protein 13 isoform 1 [Pan paniscus]
Length = 735
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 136/286 (47%), Gaps = 21/286 (7%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLK--ELDLSRCVKVTDAGMKHLL-SISTLEK 144
F L++L++A CRR T L L G C K LDLS C +++ G +++ S + +
Sbjct: 295 FHNLQNLSLAYCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYISNSCTGIMH 354
Query: 145 LWLSETGLTADGI--ALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQ-V 200
L +++ D AL+ ++ L G P ++D R+L KL + G++ V
Sbjct: 355 LTINDMPTLTDNCVKALVEKCSRITSLVFTGAPHISDCTFRALSA-CKLRKIRFEGNKRV 413
Query: 201 SNRGAAVL-KMFPRLSFLNLA-WTGVT-----KLPNISSLECLNLSFIQQVGAETDLVLS 253
++ + K +P LS + +A G+T L + L LNL+ ++G + L
Sbjct: 414 TDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIG-DMGLKQF 472
Query: 254 LTALQNLNHLERLNLEQ-TQVSDATLFPLST-FKELIHLSLRNAS-LTDVSLHQLSSLSK 310
L ++ + LNL ++SDA++ LS L +LSLRN LT + + ++
Sbjct: 473 LDGPASIK-IRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNIFS 531
Query: 311 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 356
L ++ + ++N GL + LK L + + +T+D I FCK
Sbjct: 532 LVSIDLSGTDISNEGLNVLSRHKKLKELSVSECYRITDDGIQAFCK 577
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 112/237 (47%), Gaps = 21/237 (8%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV 128
I G V DA + + L + +ADC+ +T S+L +L+ + L L+L+ CV++
Sbjct: 405 IRFEGNKRVTDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRI 464
Query: 129 TDAGMKHLL----SISTLEKLWLSETGLTADG--IALLSSLQNLSVLDLGGLP-VTDLVL 181
D G+K L SI + +L LS +D + L NL+ L L +T +
Sbjct: 465 GDMGLKQFLDGPASIK-IRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGI 523
Query: 182 RSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT------GVTKLPNIS-SLE 234
+ + L +DL G+ +SN G VL +L L+++ G+ S LE
Sbjct: 524 GYIVNIFSLVSIDLSGTDISNEGLNVLSRHKKLKELSVSECYRITDDGIQAFCKSSLILE 583
Query: 235 CLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHL 290
L++S+ Q+ +D+++ A+ +N L L++ +++D+ + LS +H+
Sbjct: 584 HLDVSYCSQL---SDMIIKALAIYCIN-LTSLSIAGCPKITDSAMEMLSAKCHYLHI 636
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 90/183 (49%), Gaps = 21/183 (11%)
Query: 69 AIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMT-CLKELDLSRCVK 127
+I+L G + + E + L + L+ L+V++C R+T + A + L+ LD+S C +
Sbjct: 534 SIDLSGTD-ISNEGLNVLSRHKKLKELSVSECYRITDDGIQAFCKSSLILEHLDVSYCSQ 592
Query: 128 VTDAGMKHLLSISTLEKLWLSETG---LTADGIALLSS-LQNLSVLDLGG-LPVTDLVLR 182
++D +K L+I + LS G +T + +LS+ L +LD+ G + +TD +L
Sbjct: 593 LSDMIIK-ALAIYCINLTSLSIAGCPKITDSAMEMLSAKCHYLHILDISGCVLLTDQILE 651
Query: 183 SLQV------LTKLEYLDLWGSQVSNRGAAVLKMF-------PRLSFLNLAWTGVTKLPN 229
LQ+ + K++Y + + R ++ ++ PR + VT+L N
Sbjct: 652 DLQIGCKQLRILKMQYCTNISKKAAQRMSSKVQQQEYNTNDPPRWFGYDREGNPVTELDN 711
Query: 230 ISS 232
I+S
Sbjct: 712 ITS 714
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 121/256 (47%), Gaps = 48/256 (18%)
Query: 117 LKELDLSRCVKVTDAGMKHLL-SISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 171
L+EL++S C TD M+H+ + L LS T +T + LL +LQNLS+
Sbjct: 247 LQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQNLSLAYC 306
Query: 172 GGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWTGVTKL 227
TD L+ L + KL YLDL G +Q+S +G +++ + TG+ L
Sbjct: 307 RRF--TDKGLQYLNLGNGCHKLIYLDLSGCTQISVQG---------FRYISNSCTGIMHL 355
Query: 228 -----PNISSLECLNLSFIQQVGAETDLVLS------------LTALQNLNHLERLNLE- 269
P ++ C+ + +++ T LV + L+A + L ++ E
Sbjct: 356 TINDMPTLTD-NCVK-ALVEKCSRITSLVFTGAPHISDCTFRALSACK----LRKIRFEG 409
Query: 270 QTQVSDATL-FPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGL 326
+V+DA+ F + L H+ + + +TD SL LS L +LT L++ + V + + GL
Sbjct: 410 NKRVTDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGL 469
Query: 327 GSF-KPPRSLKLLDLH 341
F P S+K+ +L+
Sbjct: 470 KQFLDGPASIKIRELN 485
>gi|404449942|ref|ZP_11014929.1| putative internalin A [Indibacter alkaliphilus LW1]
gi|403764421|gb|EJZ25322.1| putative internalin A [Indibacter alkaliphilus LW1]
Length = 502
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 84/174 (48%), Gaps = 19/174 (10%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLS- 215
IA L NL VL+L VTD+ +Q LT L+ L+LW + GAA+L L+
Sbjct: 84 IAGLEKATNLEVLNLNFTNVTDM--SPIQDLTGLKELNLWNLDLEGEGAAILDFVQNLNE 141
Query: 216 --FLNLAWT---GVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 270
FL+L T +++L S+L+ LNL V L+ L + E LN +
Sbjct: 142 LEFLDLRETPTSDISRLAGKSNLKHLNLREAN--------VSDLSPLSGMTQFEYLNFNR 193
Query: 271 -TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
++D + PL L +LSLRNA + D Q S +KL +IR+ +T+
Sbjct: 194 CGNITDIS--PLDGMVNLYYLSLRNAEVGDEQFKQFSQYTKLVESNIRNTGITD 245
>gi|335058613|gb|AEH26502.1| leucine-rich repeat domain protein [uncultured Acidobacteria
bacterium A11]
Length = 402
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 109/247 (44%), Gaps = 20/247 (8%)
Query: 124 RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRS 183
R + DA + L + L L L+ TG+ G+ ++ +L+NL L+L PVTD L
Sbjct: 139 RNDTLVDAWLDRLADLPDLISLDLANTGVAGPGLKVVGTLKNLERLNLTLTPVTDAHLEH 198
Query: 184 LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT--------GVTKLPNISSLEC 235
L LT L L L ++ + G L +L N +T G++ + + LE
Sbjct: 199 LAGLTNLRVLSLASAKCTGEGFRFLGKLKQLENANFHFTPVNDAGLAGISTVTGLERLEI 258
Query: 236 LNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 295
++ F GA L L +LERL + + A + PL+ +L L L++
Sbjct: 259 VHCHFT-DAGAPH--------LAKLVNLERLQIGSRDATGAAIEPLTALTKLRELDLQDN 309
Query: 296 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFC 355
T + S + L L I + + G S +L++L + LT+DA+ F
Sbjct: 310 QATAEGVRHASRIPSLRVLRIHGQI-KDEGAASIAQLSNLEILVANNAG-LTDDALDHFA 367
Query: 356 KMHPRIE 362
++ PR++
Sbjct: 368 RL-PRLQ 373
Score = 41.2 bits (95), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 2/109 (1%)
Query: 101 RRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALL 160
R T +A+ LT +T L+ELDL + T G++H I +L L + + +G A +
Sbjct: 285 RDATGAAIEPLTALTKLRELDLQDN-QATAEGVRHASRIPSLRVLRI-HGQIKDEGAASI 342
Query: 161 SSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
+ L NL +L +TD L L +L+ L++ G+++++ A L+
Sbjct: 343 AQLSNLEILVANNAGLTDDALDHFARLPRLQRLEIKGNKITDPALARLQ 391
>gi|87307769|ref|ZP_01089912.1| serine/threonine protein kinase [Blastopirellula marina DSM 3645]
gi|87289383|gb|EAQ81274.1| serine/threonine protein kinase [Blastopirellula marina DSM 3645]
Length = 1283
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 96/220 (43%), Gaps = 13/220 (5%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGLP 175
L ++ + C K TD G+ + + L + T +T G+A + ++L L+ P
Sbjct: 1055 LTHVNFNLCKKATDDGLAVFANCKDIVSLTMRFTPNVTGRGLAYFKNCKDLKELNCNYSP 1114
Query: 176 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV-----TKLPNI 230
L L LE + L G + + + P L+F+NL T V + N
Sbjct: 1115 YVSAGLPLLANCKNLEKISLMGVKFTREELRPIAELP-LTFVNLGATPVQDEWLSDFTNA 1173
Query: 231 SSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 290
SL LN + + +G + L A QN N L++L+L+ T ++D L ++L L
Sbjct: 1174 ESLTYLNFASTK-IGDK-----GLAAFQNCNALQQLSLQDTNITDEGLAYFYDCRDLEIL 1227
Query: 291 SLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 330
L+N + D L + S KL + I +T +G+ K
Sbjct: 1228 QLQNTKVRDFGLLRFKSCQKLKQVEISKTRVTAAGVDELK 1267
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 21/220 (9%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKL--WLSETGLTADGIALLSSLQNLSVLDLGGL 174
LK + ++ ++ T+ +E L W T ++ADG+ +NL VL L
Sbjct: 782 LKSVFFNQAIECTNEEFAVFADCQDIEALTLWAVPT-ISADGLKHFRRCRNLKVL---AL 837
Query: 175 PVTDLVLRSLQVLT---KLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV-----TK 226
P D + L L+ K+ L LW + ++ +L + L++T V T
Sbjct: 838 PHCDNIGSGLSHLSECDKVTNLMLWATPITREDFLAFADC-KLQGVLLSYTPVKDEWLTH 896
Query: 227 LPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 286
L + + L SF Q +G E L A QN + L+LE T+++D L +E
Sbjct: 897 LTHPEAFTDLGFSFTQ-IGDE-----GLAAFQNSKKIVNLHLEHTKITDVGLAYFHDCRE 950
Query: 287 LIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 326
L + LR S+TD + SKL LS+ +T + +
Sbjct: 951 LKSIRLRQTSVTDAGVLPFKHCSKLEELSLATTNVTAAAV 990
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 83/219 (37%), Gaps = 38/219 (17%)
Query: 98 ADCRRVTSSALWALTGMTC-----------LKELDLSRCVKVTDAGMKHLLSISTLEKLW 146
ADC+ + + LWA+ ++ LK L L C + +G+ HL + L
Sbjct: 802 ADCQDIEALTLWAVPTISADGLKHFRRCRNLKVLALPHCDNIG-SGLSHLSECDKVTNLM 860
Query: 147 LSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAA 206
L T +T + + + VL L PV D L L L +Q+ + G A
Sbjct: 861 LWATPITREDFLAFADCKLQGVL-LSYTPVKDEWLTHLTHPEAFTDLGFSFTQIGDEGLA 919
Query: 207 VLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERL 266
+ ++ L+L T +T + L + L+ +
Sbjct: 920 AFQNSKKIVNLHLEHTKITDV-------------------------GLAYFHDCRELKSI 954
Query: 267 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 305
L QT V+DA + P +L LSL ++T ++ +L
Sbjct: 955 RLRQTSVTDAGVLPFKHCSKLEELSLATTNVTAAAVEEL 993
>gi|290972542|ref|XP_002669011.1| predicted protein [Naegleria gruberi]
gi|284082551|gb|EFC36267.1| predicted protein [Naegleria gruberi]
Length = 335
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 113/252 (44%), Gaps = 32/252 (12%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 176
L L ++RC + D G ++ + ++ L E G+ + G + ++NL++L+L G +
Sbjct: 42 LTNLSINRC-SIADLGTNNISQLKQIKYLRACENGIGSIGARNIGEMKNLTLLELSGNRI 100
Query: 177 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
D L S+ L+KL YLDL ++++++G L +L LNL +T L IS L+
Sbjct: 101 GDDGLESIGKLSKLAYLDLGENEITDQGLKSLNNLEKLVTLNLKNNKITNLETISHLK-- 158
Query: 237 NLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 296
L L++ ++ + ++ K L L + +
Sbjct: 159 --------------------------LTNLDVTTNKIGNEGAKYIAEMKRLKVLRINDNH 192
Query: 297 LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 356
+T LS +++LT + + D ++ + G S +L+ LDL G +T + + C+
Sbjct: 193 ITSDGAKILSGMTQLTCIFLCDNLIGDEGALSIGLLYNLEYLDLKGAG-ITGEGLKTICE 251
Query: 357 MHP--RIEVWHE 366
+ R+ V H
Sbjct: 252 LINLRRLHVSHN 263
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 97/211 (45%), Gaps = 28/211 (13%)
Query: 140 STLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQ 199
S L +L ++ + LT L++ L NL+ L + + DL ++ L +++YL +
Sbjct: 16 SKLTELCINSSELTPQSAHLIAKLSNLTNLSINRCSIADLGTNNISQLKQIKYLRACENG 75
Query: 200 VSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQN 259
+ + GA + L+ L L+ ++G + L ++
Sbjct: 76 IGSIGARNIGEMKNLTLLELSG--------------------NRIGDD-----GLESIGK 110
Query: 260 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 319
L+ L L+L + +++D L L+ ++L+ L+L+N +T+ L +S L KLTNL +
Sbjct: 111 LSKLAYLDLGENEITDQGLKSLNNLEKLVTLNLKNNKITN--LETISHL-KLTNLDVTTN 167
Query: 320 VLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 350
+ N G + LK+L ++ + ++ A
Sbjct: 168 KIGNEGAKYIAEMKRLKVLRINDNHITSDGA 198
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 74/155 (47%), Gaps = 5/155 (3%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
GEN + + + L L +LN+ + + + L L LD++ K+ + G
Sbjct: 120 GENEITDQGLKSLNNLEKLVTLNLKNNKITNLETISHLK----LTNLDVTT-NKIGNEGA 174
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
K++ + L+ L +++ +T+DG +LS + L+ + L + D S+ +L LEYL
Sbjct: 175 KYIAEMKRLKVLRINDNHITSDGAKILSGMTQLTCIFLCDNLIGDEGALSIGLLYNLEYL 234
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLP 228
DL G+ ++ G + L L+++ ++ L
Sbjct: 235 DLKGAGITGEGLKTICELINLRRLHVSHNQISDLG 269
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 12/155 (7%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDA--GM 133
N + E Y+ + L+ L + D +TS L+GMT L C+ + D G
Sbjct: 167 NKIGNEGAKYIAEMKRLKVLRIND-NHITSDGAKILSGMTQL------TCIFLCDNLIGD 219
Query: 134 KHLLSIS---TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKL 190
+ LSI LE L L G+T +G+ + L NL L + ++DL + + + L
Sbjct: 220 EGALSIGLLYNLEYLDLKGAGITGEGLKTICELINLRRLHVSHNQISDLGAKYISGMNNL 279
Query: 191 EYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 225
L++ + GA + L+ L++ +T
Sbjct: 280 TALNVCDCNIGFEGAQFISNMQSLADLDITKNNLT 314
>gi|290993192|ref|XP_002679217.1| predicted protein [Naegleria gruberi]
gi|284092833|gb|EFC46473.1| predicted protein [Naegleria gruberi]
Length = 310
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 128/281 (45%), Gaps = 33/281 (11%)
Query: 74 GENS-VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAG 132
G+NS + E + + L+ L+V+ + + + ++ + L+EL++ C D G
Sbjct: 19 GKNSEITVELAKCICQLKNLKKLDVSYNYHLENEVVELISELRELRELNIRYC----DIG 74
Query: 133 MKHLLSISTLEKLWLSETGLT---ADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK 189
++ + ++ L+KL + G+ ADG LLS++++L+ LD+ + D +S+ L +
Sbjct: 75 VEEVKYLTKLDKLHSLDIGINQIYADGAKLLSTMKSLTKLDVAECEIGDEGCQSITELYQ 134
Query: 190 LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETD 249
L L++ G + GA + ++ N+ SL+ N +F GA+
Sbjct: 135 LTDLNINGDGIGVGGANC----------------IGQMRNLKSLDISN-NFFGNYGAK-- 175
Query: 250 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 309
++ L+ LE LN+ + + + ++ L K L LS+ + +TD + L
Sbjct: 176 ------SISELSQLEILNVSYSDIDEVGVYQLRKLKNLTSLSIHHNEITDEGTKYIVELD 229
Query: 310 KLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 350
+LT+L I + + G S L L++ + E A
Sbjct: 230 QLTHLDISNNQIETEGAKSISEMSQLTSLNISSNIIGDEGA 270
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 29/194 (14%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRR-----VTSSALWALT------------GMTC 116
G N + A+ L + L L+VA+C + + L+ LT G C
Sbjct: 93 GINQIYADGAKLLSTMKSLTKLDVAECEIGDEGCQSITELYQLTDLNINGDGIGVGGANC 152
Query: 117 ------LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLD 170
LK LD+S + G K + +S LE L +S + + G+ L L+NL+ L
Sbjct: 153 IGQMRNLKSLDISNNF-FGNYGAKSISELSQLEILNVSYSDIDEVGVYQLRKLKNLTSLS 211
Query: 171 LGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVT 225
+ +TD + + L +L +LD+ +Q+ GA + +L+ LN++ G
Sbjct: 212 IHHNEITDEGTKYIVELDQLTHLDISNNQIETEGAKSISEMSQLTSLNISSNIIGDEGAQ 271
Query: 226 KLPNISSLECLNLS 239
+ ++ L LN+S
Sbjct: 272 YISHLKKLTSLNVS 285
>gi|328698260|ref|XP_001948969.2| PREDICTED: leucine-rich repeats and immunoglobulin-like domains
protein 1-like [Acyrthosiphon pisum]
Length = 537
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 11/208 (5%)
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
+++TLEKL+L+ + + L L LDL + D+ +SL LT+LE L L
Sbjct: 137 NLTTLEKLYLNYNKIHKLDSDIFIGLTKLKTLDLSNNKIRDIEPKSLTHLTELEILILSN 196
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLP-----NISSLECLNLSFIQQVGAETDLVL 252
+++S+ V +L L L + + N++SLE L L+F ++++ +
Sbjct: 197 NKISDVKIGVFTNLSKLRLLYLDLNEIENIETGVFNNLTSLENLYLNFNNIHKLDSEMFI 256
Query: 253 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 312
LT L L L ++ D LS EL LSL N ++DV + ++LS L
Sbjct: 257 GLTKLN------TLYLSYNKIRDIVPKLLSNLTELKVLSLSNNKISDVKIGAFTNLSNLR 310
Query: 313 NLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
LS+ + + N G F SL+ L L
Sbjct: 311 TLSLNENKIENLETGVFNNLTSLENLYL 338
>gi|72385469|ref|XP_846402.1| leucine-rich repeat protein (LRRP) [Trypanosoma brucei TREU927]
gi|9366571|emb|CAB95333.1| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 1448
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 129/303 (42%), Gaps = 69/303 (22%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
L S N+ D S + ++ L +L +S C VTDA + ++ LE+L LS
Sbjct: 286 LNSTNIDD------SCVEEISACVKLSKLSVSECNNVTDA--TPISQLAALEELNLSNCH 337
Query: 152 LTADGIALLSSLQNLSVLDLGGLPVTDLVLR------SLQVL-----------------T 188
+T GI L L L +LDL G+PV D L+ SL+ L T
Sbjct: 338 ITK-GIGTLGMLLRLRILDLSGVPVEDNCLKDLCDCGSLERLNISYCIQLTDINPLSNAT 396
Query: 189 KLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL----------------------------A 220
+E L+L G + RG V+ PRL L++
Sbjct: 397 AIEELNLNGCRRITRGIGVVWALPRLRILHMKDVHLSEPSLDSVGTGGLLVKVSLDNCAG 456
Query: 221 WTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFP 280
+ +T L +I +LE LN IQ+ D++ + L L +L LN+++ +S
Sbjct: 457 FGDMTLLSSIVTLEELN---IQKCA---DIISGVGCLGTLPYLRVLNVKEVHISSLDFIG 510
Query: 281 LSTFKELIHLSLRNASLTDVS-LHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 339
+ K L+ L+L S T +S + L+++ L LS+ ++G+G LK+LD
Sbjct: 511 IGASKSLLQLTLE--SFTGLSNVEALANILTLEKLSLHGCTGIDAGIGCLGNLPQLKMLD 568
Query: 340 LHG 342
L G
Sbjct: 569 LSG 571
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 113/271 (41%), Gaps = 55/271 (20%)
Query: 70 IELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVT 129
++L G N+ D E + L + + SLN++ C ++T+ + ++ + L EL+LS C+++
Sbjct: 567 LDLSGTNT-DNESLRSLCLSQTVVSLNLSHCWKMTNVS--HISSLEALNELNLSNCIRI- 622
Query: 130 DAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK 189
+AG + + + L LS T +T I+ S +NL LDL
Sbjct: 623 NAGWEAIEKLQQLHVAILSNTHITDRDISHFSKCKNLVTLDL------------------ 664
Query: 190 LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETD 249
SF N VT L NI++LE LNL +
Sbjct: 665 -------------------------SFCN-KLLDVTTLSNITTLEELNLDSCSNIRK--- 695
Query: 250 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 309
L+ L L L LN++ Q+ D+ + L + LSL N + LS+L
Sbjct: 696 ---GLSVLGELPRLCVLNIKGVQLEDSVIGSLGNGNSFVRLSLENCKGFG-GVTPLSNLV 751
Query: 310 KLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
L L++ SG+G+ L++LDL
Sbjct: 752 TLEELNLHYCDKVTSGMGTLGRLLQLRVLDL 782
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 122/280 (43%), Gaps = 53/280 (18%)
Query: 108 LWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLS 167
+ +L + LK L L R + + +HL S+ TLE+L +++T + I +S L NL
Sbjct: 225 MISLNNLDMLKRLRL-RSNNIDNNDARHLFSVGTLEELAITDT-MQLTNIREISRLTNLK 282
Query: 168 VLDLGGLPVTDLVLRSLQVLTK-----------------------LEYLDLWGSQVSNRG 204
L+L + D + + K LE L+L ++ +G
Sbjct: 283 CLELNSTNIDDSCVEEISACVKLSKLSVSECNNVTDATPISQLAALEELNLSNCHIT-KG 341
Query: 205 AAVLKMFPRLSFLNLAWTGV-----TKLPNISSLECLNLSFIQQVGAETDLVLSLTALQN 259
L M RL L+L+ V L + SLE LN+S+ Q+ + + + + TA++
Sbjct: 342 IGTLGMLLRLRILDLSGVPVEDNCLKDLCDCGSLERLNISYCIQL-TDINPLSNATAIEE 400
Query: 260 LN------------------HLERLNLEQTQVSDATLFPLSTFKELIHLSLRN-ASLTDV 300
LN L L+++ +S+ +L + T L+ +SL N A D+
Sbjct: 401 LNLNGCRRITRGIGVVWALPRLRILHMKDVHLSEPSLDSVGTGGLLVKVSLDNCAGFGDM 460
Query: 301 SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
+L LSS+ L L+I+ SG+G L++L++
Sbjct: 461 TL--LSSIVTLEELNIQKCADIISGVGCLGTLPYLRVLNV 498
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 113/286 (39%), Gaps = 44/286 (15%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+ LG YLR LNV + ++S + L +L L +++ ++ L +I TL
Sbjct: 484 VGCLGTLPYLRVLNVKEVH-ISSLDFIGIGASKSLLQLTLESFTGLSN--VEALANILTL 540
Query: 143 EKLWLSE-TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL---QVLTKLEYLDLWG- 197
EKL L TG+ A GI L +L L +LDL G + LRSL Q + L W
Sbjct: 541 EKLSLHGCTGIDA-GIGCLGNLPQLKMLDLSGTNTDNESLRSLCLSQTVVSLNLSHCWKM 599
Query: 198 ---SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNI---------------------SSL 233
S +S+ A +N W + KL + +L
Sbjct: 600 TNVSHISSLEALNELNLSNCIRINAGWEAIEKLQQLHVAILSNTHITDRDISHFSKCKNL 659
Query: 234 ECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 293
L+LSF + +L +T L N+ LE LNL+ L L L L+++
Sbjct: 660 VTLDLSFCNK-------LLDVTTLSNITTLEELNLDSCSNIRKGLSVLGELPRLCVLNIK 712
Query: 294 NASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 339
L D + L + + LS+ + G G P +L L+
Sbjct: 713 GVQLEDSVIGSLGNGNSFVRLSLENC----KGFGGVTPLSNLVTLE 754
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 97/237 (40%), Gaps = 51/237 (21%)
Query: 127 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTD-------- 178
++TDA L +I++LE+L L + G T +G L L L LDLG ++D
Sbjct: 1169 ELTDA--TPLSNITSLEELSLRDCGDTLEGAWTLGKLPRLRSLDLGLSDISDNTLDEICL 1226
Query: 179 ------LVLR---------SLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTG 223
L LR S+ LT LE L+L G G L PRL LNL T
Sbjct: 1227 SRFITSLNLRYNFKLTDISSISNLTALEELNLSGCHRITSGWEALSELPRLRVLNLESTS 1286
Query: 224 VTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLST 283
VT + G SL LNLE ++DA+ L+
Sbjct: 1287 VTT---------------RDGGYYISRCKSLVT---------LNLESCDMTDASC--LAN 1320
Query: 284 FKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
K L L + L +L +L L++ D+++T+ L +PP +++ L+L
Sbjct: 1321 IKTLEELHIGECDELTQGFSALFTLPRLRILNLMDSLITDEDLREIQPPHTIEELNL 1377
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 120/265 (45%), Gaps = 42/265 (15%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L+SLN++ C+ VT + L+ ++ L+EL+++ C + G + L + L LS+
Sbjct: 1015 KSLQSLNLSHCKWVTD--ISVLSSLSTLEELNVNFCNGIR-KGWESLGKLPLLRVAILSD 1071
Query: 150 TGLTADGIALLSSLQNLSVLDLGGL-PVTDLV----LRSLQVLTKLEYLDLWGSQVSNRG 204
T +TA IA LSS + L L ++D+ ++SL+ L +Y D +G
Sbjct: 1072 TNITAKDIACLSSCKKLVKLQFFRCEKLSDVTVVYEIQSLEELIVRKYSDGL------KG 1125
Query: 205 AAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLE 264
L RL FL+L + + ++ +G LV
Sbjct: 1126 LNALGTLSRLRFLHLRNARGSDIS------------VESIGTSKSLV------------- 1160
Query: 265 RLNLE-QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
RLN+E + +++DAT PLS L LSLR+ T L L +L +L + + +++
Sbjct: 1161 RLNIETREELTDAT--PLSNITSLEELSLRDCGDTLEGAWTLGKLPRLRSLDLGLSDISD 1218
Query: 324 SGLGSFKPPRSLKLLDLHGGWLLTE 348
+ L R + L+L + LT+
Sbjct: 1219 NTLDEICLSRFITSLNLRYNFKLTD 1243
>gi|427795237|gb|JAA63070.1| Hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 583
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 150/314 (47%), Gaps = 27/314 (8%)
Query: 72 LRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC--LKELDLSRCVKV 128
LRG SV DA A+ R + +L++ CRRVT ++ G C L +LD+ C ++
Sbjct: 227 LRGCQSVGDAAMQAFAARCRNIEALSLNGCRRVTDVTCESV-GAHCSRLVDLDVGSCGQL 285
Query: 129 TDAGMKHLLS-ISTLEKLWLS-ETGLTADG-IALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
TD ++ + + LE+L +S +T DG I + L L G P D V + Q
Sbjct: 286 TDRSLRAIATGCRNLERLDVSWSQQVTPDGFIRIARGCPRLQSLIAKGCPGLDDV--ACQ 343
Query: 186 VLTK-LEYLDLWGSQ----VSNRG-AAVLKMFPRLSFLNLAWTGVTKLPNISSL----EC 235
L + L G V++ G AA+ P L+++ L + T++ + S L C
Sbjct: 344 ALAEGCPRLRAVGFNECVAVTDVGVAAIASRCPDLAYVGL--SNCTQISDASLLALAQHC 401
Query: 236 LNLSFIQQVGAETDLVLSLTAL-QNLNHLERLNLEQT-QVSDATLFPLSTF-KELIHLSL 292
+L ++ G + AL +N LER++LE+ ++D TL L+ F L LSL
Sbjct: 402 RSLRTLEVAGCSRLTDVGFQALARNCPSLERMDLEECVHITDLTLVALAGFCPRLEKLSL 461
Query: 293 RNA-SLTDVSLHQLSS-LSKLTNLSIRDAVL-TNSGLGSFKPPRSLKLLDLHGGWLLTED 349
+ LTD + LS+ L KL L + + L + + L +L+ +DL+ L+T +
Sbjct: 462 SHCEQLTDEGIRHLSAGLEKLVLLELDNCPLVSEASLEYLSRCPALRRVDLYDCQLITRE 521
Query: 350 AILQFCKMHPRIEV 363
A+ +F P++ +
Sbjct: 522 AVGKFNARMPQLRI 535
>gi|403257101|ref|XP_003921175.1| PREDICTED: F-box/LRR-repeat protein 13 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 735
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 136/286 (47%), Gaps = 21/286 (7%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLK--ELDLSRCVKVTDAGMKHLL-SISTLEK 144
F L++L++A CRR T L L G C K LDLS C +++ G +++ S + +
Sbjct: 295 FHNLQNLSLAYCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGILH 354
Query: 145 LWLSETGLTADGI--ALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQ-V 200
L +++ D AL+ +++ + G P ++D ++L KL + G++ +
Sbjct: 355 LTINDMPTLTDNCVKALVEKCSHITSMVFTGAPHISDCTFKALST-CKLRKIRFEGNKRI 413
Query: 201 SNRGAAVL-KMFPRLSFLNLA-WTGVT-----KLPNISSLECLNLSFIQQVGAETDLVLS 253
++ + K +P LS + +A G+T L + L LNL+ ++G + L
Sbjct: 414 TDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIG-DVGLRQF 472
Query: 254 LTALQNLNHLERLNLEQ-TQVSDATLFPLST-FKELIHLSLRNAS-LTDVSLHQLSSLSK 310
L ++ + LNL Q+SD ++ LS L +LSLRN LT + + ++
Sbjct: 473 LDGPASI-RIRELNLSNCVQLSDVSVMKLSERCPNLNYLSLRNCEHLTAQGIAYIVNIFS 531
Query: 311 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 356
L ++ + ++N GL + LK L + + +T+D I FCK
Sbjct: 532 LVSIDLSGTDISNEGLSVLSRHKKLKELSVSACYRITDDGIQAFCK 577
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 111/236 (47%), Gaps = 19/236 (8%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV 128
I G + DA + + L + +ADC+ +T S+L +L+ + L L+L+ CV++
Sbjct: 405 IRFEGNKRITDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRI 464
Query: 129 TDAGMKHLLSIST---LEKLWLSETGLTAD--GIALLSSLQNLSVLDLGGLP-VTDLVLR 182
D G++ L + +L LS +D + L NL+ L L +T +
Sbjct: 465 GDVGLRQFLDGPASIRIRELNLSNCVQLSDVSVMKLSERCPNLNYLSLRNCEHLTAQGIA 524
Query: 183 SLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT------GVTKLPNIS-SLEC 235
+ + L +DL G+ +SN G +VL +L L+++ G+ S LE
Sbjct: 525 YIVNIFSLVSIDLSGTDISNEGLSVLSRHKKLKELSVSACYRITDDGIQAFCKSSLILER 584
Query: 236 LNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHL 290
L++S+ Q+ +D+++ A+ +N L L++ +++D+ + LS +H+
Sbjct: 585 LDVSYCSQL---SDMIIKALAIYCIN-LTSLSIAGCPKITDSAMEMLSAKCHYLHI 636
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 117/251 (46%), Gaps = 38/251 (15%)
Query: 117 LKELDLSRCVKVTDAGMKHLL-SISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 171
L+EL++S C TD M+H+ + L LS T +T + LL +LQNLS+
Sbjct: 247 LQELNVSDCPTFTDESMRHISEGCPGVLYLNLSNTTITNRTMRLLPRHFHNLQNLSLAYC 306
Query: 172 GGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWTG---- 223
TD L+ L + KL YLDL G +Q+S +G ++ + TG
Sbjct: 307 RRF--TDKGLQYLNLGNGCHKLIYLDLSGCTQISVQG---------FRYIANSCTGILHL 355
Query: 224 -VTKLPNISS-------LECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE-QTQVS 274
+ +P ++ +C +++ + GA + AL L ++ E +++
Sbjct: 356 TINDMPTLTDNCVKALVEKCSHITSMVFTGAPHISDCTFKALSTCK-LRKIRFEGNKRIT 414
Query: 275 DATL-FPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSF-K 330
DA+ F + L H+ + + +TD SL LS L +LT L++ + V + + GL F
Sbjct: 415 DASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDVGLRQFLD 474
Query: 331 PPRSLKLLDLH 341
P S+++ +L+
Sbjct: 475 GPASIRIRELN 485
>gi|301126468|ref|XP_002909849.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262101999|gb|EEY60051.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 427
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 109/241 (45%), Gaps = 23/241 (9%)
Query: 70 IELRGENSVDAEWMAYLGAFRYLRSLNVADCRR--VTSSALWALTGMTCLKELDLSRCVK 127
+ LRG + V + L + L++LN+ C + +T + AL +T L L+LS C +
Sbjct: 169 LNLRGCSQVGDNGIRALARLKNLQTLNLWYCNQGALTDGGISALAEVTSLTSLNLSNCSQ 228
Query: 128 VTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLGG-LPVTDLVLRSLQ 185
+TD G+ L ++ L L ++ G +T G L+ L NL LD+ G +TD L
Sbjct: 229 LTDEGISSLSTLVKLRHLEIANVGEVTDQGFLALAPLVNLVTLDVAGCYNITDAGTEVLV 288
Query: 186 VLTKLEYLDLW-GSQVSNRGAAVLKMFPRLSFLNLAWTG---------VTKLPNISSLEC 235
KL +LW S++ + ++ ++ FLN G + KL N++SL+
Sbjct: 289 NFPKLASCNLWYCSEIGDATFQHMESLTKMRFLNFMKCGKVTDRGLRSIAKLRNLTSLDM 348
Query: 236 LNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRN 294
++ + G L L LN L+ L L + + D + LS L+ L L N
Sbjct: 349 VSCFNVTDEG--------LNELSKLNRLKSLYLGGCSGIRDEGIAALSHLSSLVILDLSN 400
Query: 295 A 295
Sbjct: 401 C 401
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 133/281 (47%), Gaps = 41/281 (14%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQ--NLSVLDLGG 173
LKE++L+ C +TD ++ L ++S L + L +T I LL+ Q +L+ ++LG
Sbjct: 88 LKEVNLTGCSSLTDESVEQLANLSGLTSVALKGCYQVTDKSIKLLTESQSNSLTSVNLGY 147
Query: 174 LP-VTDLVLRSLQV-LTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWT-------- 222
V+D + ++ L+KL YL+L G SQV + G L L LNL +
Sbjct: 148 CKVVSDEGITAIASNLSKLNYLNLRGCSQVGDNGIRALARLKNLQTLNLWYCNQGALTDG 207
Query: 223 GVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT----------- 271
G++ L ++SL LNLS Q+ E + SL+ L L HLE N+ +
Sbjct: 208 GISALAEVTSLTSLNLSNCSQLTDEG--ISSLSTLVKLRHLEIANVGEVTDQGFLALAPL 265
Query: 272 ------------QVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLS-IR 317
++DA L F +L +L S + D + + SL+K+ L+ ++
Sbjct: 266 VNLVTLDVAGCYNITDAGTEVLVNFPKLASCNLWYCSEIGDATFQHMESLTKMRFLNFMK 325
Query: 318 DAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMH 358
+T+ GL S R+L LD+ + +T++ + + K++
Sbjct: 326 CGKVTDRGLRSIAKLRNLTSLDMVSCFNVTDEGLNELSKLN 366
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 83/176 (47%), Gaps = 13/176 (7%)
Query: 81 EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
E ++ L LR L +A+ VT AL + L LD++ C +TDAG + L++
Sbjct: 232 EGISSLSTLVKLRHLEIANVGEVTDQGFLALAPLVNLVTLDVAGCYNITDAGTEVLVNFP 291
Query: 141 TLE--KLWL-SETG-LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLW 196
L LW SE G T + L+ ++ L+ + G VTD LRS+ L L LD+
Sbjct: 292 KLASCNLWYCSEIGDATFQHMESLTKMRFLNFMKCG--KVTDRGLRSIAKLRNLTSLDMV 349
Query: 197 GS-QVSNRGAAVLKMFPRLSFLNLAWT------GVTKLPNISSLECLNLSFIQQVG 245
V++ G L RL L L G+ L ++SSL L+LS +QVG
Sbjct: 350 SCFNVTDEGLNELSKLNRLKSLYLGGCSGIRDEGIAALSHLSSLVILDLSNCRQVG 405
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 3/141 (2%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N +++ G ++ L F L S N+ C + + + +T ++ L+ +C
Sbjct: 267 NLVTLDVAGCYNITDAGTEVLVNFPKLASCNLWYCSEIGDATFQHMESLTKMRFLNFMKC 326
Query: 126 VKVTDAGMKHLLSISTLEKL-WLSETGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRS 183
KVTD G++ + + L L +S +T +G+ LS L L L LGG + D + +
Sbjct: 327 GKVTDRGLRSIAKLRNLTSLDMVSCFNVTDEGLNELSKLNRLKSLYLGGCSGIRDEGIAA 386
Query: 184 LQVLTKLEYLDLWGS-QVSNR 203
L L+ L LDL QV N+
Sbjct: 387 LSHLSSLVILDLSNCRQVGNK 407
>gi|354472805|ref|XP_003498627.1| PREDICTED: F-box/LRR-repeat protein 2-like [Cricetulus griseus]
Length = 599
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 159/337 (47%), Gaps = 30/337 (8%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC--LKELDLSRCV 126
+ LRG V D+ + R + LN+ C ++T S ++L G C LK LDL+ CV
Sbjct: 257 LSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSL-GRFCSKLKHLDLTSCV 315
Query: 127 KVTDAGMKHLL-SISTLEKLWLSETG-LTADGI-ALLSSLQNLSVLDLGGLP-VTDLVLR 182
VT++ +K + LE L LS +T DGI AL+ + L L L G + D LR
Sbjct: 316 SVTNSSLKGISDGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALR 375
Query: 183 SLQVLTKLEYLDL-W---GSQVSNRGAA-VLKMFPRLSFLNLAWTGVTKLPNIS----SL 233
+Q T + + W ++++ G + + RL L L +G + L + S L
Sbjct: 376 HIQCPTAPVHSPIVWPHLPKRITDDGVVQICRGCHRLQALCL--SGCSNLTDASLTALGL 433
Query: 234 ECLNLSFIQQVGAE--TDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTF-KELIH 289
C L ++ TD +L A +N + LE+++LE+ ++D+TL LS +L
Sbjct: 434 NCPRLQILEAARCSHLTDAGFTLLA-RNCHDLEKMDLEECVLITDSTLIQLSIHCPKLQA 492
Query: 290 LSLRNASL-TDVSLHQLSSLS----KLTNLSIRDAVL-TNSGLGSFKPPRSLKLLDLHGG 343
LSL + L TD + LSS + +L L + + +L T++ L + R L+ L+L+
Sbjct: 493 LSLSHCELITDEGILHLSSSTCGHERLRVLELDNCLLVTDAALEHLENCRGLERLELYDC 552
Query: 344 WLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNG 380
+T I + P ++V + + P + +G
Sbjct: 553 QQVTRAGIKRMRAQLPHVKVHAYFAPVTPPPAVAGSG 589
>gi|449492470|ref|XP_002196063.2| PREDICTED: F-box/LRR-repeat protein 2 [Taeniopygia guttata]
Length = 460
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 161/342 (47%), Gaps = 26/342 (7%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC-LKELDLSRCVK 127
+ LRG V D+ + R + LN+ C ++T S ++L+ LK LDL+ CV
Sbjct: 120 LSLRGCLGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVA 179
Query: 128 VTDAGMKHLL-SISTLEKLWLSETG-LTADGI-ALLSSLQNLSVLDLGGLP-VTDLVLRS 183
+T++ +K L LE L LS +T DGI AL+ L L L G + D L+
Sbjct: 180 ITNSSLKGLSEGCRNLEHLNLSWCDQITKDGIEALVKGCSGLKALFLRGCTQLEDEALKH 239
Query: 184 LQV-LTKLEYLDLWG-SQVSNRG-AAVLKMFPRLSFLNLAWTGVTKLPNIS----SLECL 236
+Q +L L+L +Q+S+ G + K RL +L +G + L + S L C
Sbjct: 240 IQSHCHELVILNLQSCTQISDEGIVKICKGCHRLQ--SLCVSGCSNLTDASLTALGLNCP 297
Query: 237 NLSFIQQVGAE--TDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTF-KELIHLSL 292
L ++ TD +L A QN + LE+++LE+ ++D+TL LS +L LSL
Sbjct: 298 RLKILEAARCSHLTDAGFTLLA-QNCHELEKMDLEECVLITDSTLIQLSIHCPKLQALSL 356
Query: 293 RNASL-TDVSLHQLSSLS----KLTNLSIRDAVL-TNSGLGSFKPPRSLKLLDLHGGWLL 346
+ L TD + LS+ + +L L + + +L T+ L + +L+ ++L+ +
Sbjct: 357 SHCELITDDGILHLSNSTCGHERLQVLELDNCLLITDVTLEHLENCHNLERIELYDCQQV 416
Query: 347 TEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSL 388
T I + P ++V + + P +G +G R +
Sbjct: 417 TRAGIKRIRAHLPHVKVHAYFAPVTPPPSVGGSGQRLCRCCI 458
>gi|19584432|emb|CAD28506.1| hypothetical protein [Homo sapiens]
Length = 448
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 135/286 (47%), Gaps = 21/286 (7%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLK--ELDLSRCVKVTDAGMKHLL-SISTLEK 144
F L++L++A CRR T L L G C K LDLS C +++ G +++ S + +
Sbjct: 8 FHNLQNLSLAYCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGIMH 67
Query: 145 LWLSETGLTADGI--ALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQ-V 200
L +++ D AL+ ++ L G P ++D R+L KL + G++ V
Sbjct: 68 LTINDMPTLTDNCVKALVEKCSRITSLVFTGAPHISDCTFRALSA-CKLRKIRFEGNKRV 126
Query: 201 SNRGAAVL-KMFPRLSFLNLA-WTGVT-----KLPNISSLECLNLSFIQQVGAETDLVLS 253
++ + K +P LS + +A G+T L + L LNL+ ++G + L
Sbjct: 127 TDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIG-DMGLKQF 185
Query: 254 LTALQNLNHLERLNLEQ-TQVSDATLFPLST-FKELIHLSLRNAS-LTDVSLHQLSSLSK 310
L ++ + LNL ++SDA + LS L +LSLRN LT + + ++
Sbjct: 186 LDGPASM-RIRELNLSNCVRLSDAFVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNIFS 244
Query: 311 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 356
L ++ + ++N GL + LK L + + +T+D I FCK
Sbjct: 245 LVSIDLSGTDISNEGLNVLSRHKKLKELSVSECYRITDDGIQAFCK 290
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 110/236 (46%), Gaps = 19/236 (8%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV 128
I G V DA + + L + +ADC+ +T S+L +L+ + L L+L+ CV++
Sbjct: 118 IRFEGNKRVTDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRI 177
Query: 129 TDAGMKHLLSIST---LEKLWLSETGLTADGIALLSS--LQNLSVLDLGGLP-VTDLVLR 182
D G+K L + +L LS +D + S NL+ L L +T +
Sbjct: 178 GDMGLKQFLDGPASMRIRELNLSNCVRLSDAFVMKLSERCPNLNYLSLRNCEHLTAQGIG 237
Query: 183 SLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT------GVTKLPNIS-SLEC 235
+ + L +DL G+ +SN G VL +L L+++ G+ S LE
Sbjct: 238 YIVNIFSLVSIDLSGTDISNEGLNVLSRHKKLKELSVSECYRITDDGIQAFCKSSLILEH 297
Query: 236 LNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHL 290
L++S+ Q+ +D+++ A+ +N L L++ +++D+ + LS +H+
Sbjct: 298 LDVSYCSQL---SDMIIKALAIYCIN-LTSLSIAGCPKITDSAMEMLSAKCHYLHI 349
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 90/183 (49%), Gaps = 21/183 (11%)
Query: 69 AIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMT-CLKELDLSRCVK 127
+I+L G + + E + L + L+ L+V++C R+T + A + L+ LD+S C +
Sbjct: 247 SIDLSGTD-ISNEGLNVLSRHKKLKELSVSECYRITDDGIQAFCKSSLILEHLDVSYCSQ 305
Query: 128 VTDAGMKHLLSISTLEKLWLSETG---LTADGIALLSS-LQNLSVLDLGG-LPVTDLVLR 182
++D +K L+I + LS G +T + +LS+ L +LD+ G + +TD +L
Sbjct: 306 LSDMIIK-ALAIYCINLTSLSIAGCPKITDSAMEMLSAKCHYLHILDISGCVLLTDQILE 364
Query: 183 SLQV------LTKLEYLDLWGSQVSNRGAAVLKMF-------PRLSFLNLAWTGVTKLPN 229
LQ+ + K++Y + + R ++ ++ PR + VT+L N
Sbjct: 365 DLQIGCKQLRILKMQYCTNISKKAAQRMSSKVQQQEYNTNDPPRWFGYDREGNPVTELDN 424
Query: 230 ISS 232
I+S
Sbjct: 425 ITS 427
>gi|434405931|ref|YP_007148816.1| Leucine Rich Repeat (LRR)-containing protein [Cylindrospermum
stagnale PCC 7417]
gi|428260186|gb|AFZ26136.1| Leucine Rich Repeat (LRR)-containing protein [Cylindrospermum
stagnale PCC 7417]
Length = 451
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 126/252 (50%), Gaps = 32/252 (12%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
++ + L +L D + S + L+ +T L LDLS +++D +K L +++ L
Sbjct: 127 ISDIKVLSNLTNLTDIDLSKNQISDIKVLSNLTNLTVLDLSDN-QISD--IKVLSNLTNL 183
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
+ LSE ++ I +LS+L NL+VLDLG ++D ++ L LT L YL LW +Q+
Sbjct: 184 TSVKLSENQIS--DIEVLSNLTNLTVLDLGYNQISD--IKVLSNLTNLTYLSLWNNQIG- 238
Query: 203 RGAAVLKMFPRLSFLNLAW----TGVTKLPNISSLECLNL-----SFIQQVGAETDL--- 250
VL L+ L+L W + + L N+++L L L S I+ + T+L
Sbjct: 239 -DIKVLSNLTNLTSLSL-WDNQISDIKPLSNLTNLTSLYLWDNQISDIKPLSNLTNLTYL 296
Query: 251 ------VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQ 304
+ + L NL +L L+L + Q+ D + PLS L L L + D+
Sbjct: 297 YLWDNQIADIKPLSNLTNLTDLDLSKNQIGD--IKPLSNLTSLTSLDLSKNQIADI--KP 352
Query: 305 LSSLSKLTNLSI 316
LS+L+ LT+LS+
Sbjct: 353 LSNLTNLTSLSL 364
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 144/304 (47%), Gaps = 37/304 (12%)
Query: 106 SALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQN 165
S + L+ +T L LDLS +++D +K L +++ L + LS ++ I +LS+L N
Sbjct: 84 SDIKPLSNLTNLTTLDLSEN-QISD--IKPLSNLTNLTDIDLSSNQIS--DIKVLSNLTN 138
Query: 166 LSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 225
L+ +DL ++D ++ L LT L LDL +Q+S VL L+ + L+ ++
Sbjct: 139 LTDIDLSKNQISD--IKVLSNLTNLTVLDLSDNQIS--DIKVLSNLTNLTSVKLSENQIS 194
Query: 226 K---LPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 282
L N+++L L+L + Q + + L NL +L L+L Q+ D + LS
Sbjct: 195 DIEVLSNLTNLTVLDLGYNQ--------ISDIKVLSNLTNLTYLSLWNNQIGDIKV--LS 244
Query: 283 TFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 342
L LSL + ++D+ LS+L+ LT+L + D + + KP +L L
Sbjct: 245 NLTNLTSLSLWDNQISDI--KPLSNLTNLTSLYLWD-----NQISDIKPLSNLTNLTYLY 297
Query: 343 GWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSLRASLVKQKQ--DPM 400
W D Q + P + + + +QIG P + TSL + + + Q D
Sbjct: 298 LW----DN--QIADIKPLSNLTNLTDLDLSKNQIGDIKPLSNLTSLTSLDLSKNQIADIK 351
Query: 401 PMSH 404
P+S+
Sbjct: 352 PLSN 355
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 115/250 (46%), Gaps = 48/250 (19%)
Query: 106 SALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQN 165
S + L+ +T L LDL +++D + L+ T LW ++ G I +LS+L N
Sbjct: 194 SDIEVLSNLTNLTVLDLGYN-QISDIKVLSNLTNLTYLSLWNNQIG----DIKVLSNLTN 248
Query: 166 LSVLDLGGLPVTDLV--------------------LRSLQVLTKLEYLDLWGSQVSNRGA 205
L+ L L ++D+ ++ L LT L YL LW +Q+++
Sbjct: 249 LTSLSLWDNQISDIKPLSNLTNLTSLYLWDNQISDIKPLSNLTNLTYLYLWDNQIADIKP 308
Query: 206 AVLKMFPRLSFLNLAWT---GVTKLPNISSLECLNLSF-----IQQVGAETDLV------ 251
L L+ L+L+ + L N++SL L+LS I+ + T+L
Sbjct: 309 --LSNLTNLTDLDLSKNQIGDIKPLSNLTSLTSLDLSKNQIADIKPLSNLTNLTSLSLWR 366
Query: 252 ---LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 308
+ + L NL +L L+L + Q+SD + PLS L + L ++D+ LS+L
Sbjct: 367 NQSIDIELLSNLTNLTSLDLSENQISD--IKPLSNLTNLTDIDLSENQISDI--KPLSNL 422
Query: 309 SKLTNLSIRD 318
+KL +L I++
Sbjct: 423 TKLEDLQIQN 432
>gi|363730256|ref|XP_418823.3| PREDICTED: F-box/LRR-repeat protein 2 [Gallus gallus]
Length = 466
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 161/342 (47%), Gaps = 26/342 (7%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC-LKELDLSRCVK 127
+ LRG + V D+ + R + LN+ C ++T S ++L+ LK LDL+ CV
Sbjct: 126 LSLRGCHVVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVA 185
Query: 128 VTDAGMKHLL-SISTLEKLWLSETG-LTADGI-ALLSSLQNLSVLDLGGLP-VTDLVLRS 183
+T++ +K L LE L LS +T DGI AL+ L L L G + D L+
Sbjct: 186 ITNSSLKGLSEGCRNLEHLNLSWCDQITKDGIEALVKGCSGLKALFLRGCTQLEDEALKH 245
Query: 184 LQV-LTKLEYLDLWG-SQVSNRG-AAVLKMFPRLSFLNLAWTGVTKLPNIS----SLECL 236
+Q +L L+L +Q+S+ G + + RL +L +G L + S L C
Sbjct: 246 IQNHCHELAILNLQSCTQISDEGIVKICRGCHRLQ--SLCVSGCCNLTDASLTALGLNCP 303
Query: 237 NLSFIQQVGAE--TDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTF-KELIHLSL 292
L ++ TD +L A +N + LE+++LE+ ++D+TL LS +L LSL
Sbjct: 304 RLKILEAARCSQLTDAGFTLLA-RNCHELEKMDLEECVLITDSTLIQLSIHCPKLQALSL 362
Query: 293 RNASL-TDVSLHQLSSLS----KLTNLSIRDAVL-TNSGLGSFKPPRSLKLLDLHGGWLL 346
+ L TD + LS+ + +L L + + +L T+ L + +L+ ++L+ +
Sbjct: 363 SHCELITDDGILHLSNSTCGHERLQVLELDNCLLITDVTLEHLENCHNLERIELYDCQQV 422
Query: 347 TEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSL 388
T I + P ++V + + P +G +G R +
Sbjct: 423 TRAGIKRIRAHRPHVKVHAYFAPVTPPPSVGGSGQRLCRCCI 464
>gi|73990001|ref|XP_542692.2| PREDICTED: F-box/LRR-repeat protein 2 [Canis lupus familiaris]
Length = 492
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 163/342 (47%), Gaps = 26/342 (7%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC-LKELDLSRCVK 127
+ LRG V D+ + R + LN+ C ++T S ++L+ LK LDL+ CV
Sbjct: 152 LSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVS 211
Query: 128 VTDAGMKHLL-SISTLEKLWLSETG-LTADGI-ALLSSLQNLSVLDLGGLP-VTDLVLRS 183
+T++ +K + LE L LS +T DGI AL+ + L L L G + D L+
Sbjct: 212 ITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKH 271
Query: 184 LQ-VLTKLEYLDLWG-SQVSNRGAA-VLKMFPRLSFLNLAWTGVTKLPNIS----SLECL 236
+Q +L L+L S++++ G + + RL L L +G + L + S +L C
Sbjct: 272 IQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCL--SGCSNLTDASLTALALNCP 329
Query: 237 NLSFIQQVGAE--TDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTF-KELIHLSL 292
L ++ TD +L A +N + LE+++LE+ ++D+TL LS +L LSL
Sbjct: 330 RLQILEAARCSHLTDAGFTLLA-RNCHDLEKMDLEECILITDSTLIQLSVHCPKLQALSL 388
Query: 293 RNASL-TDVSLHQLSSLS----KLTNLSIRDAVL-TNSGLGSFKPPRSLKLLDLHGGWLL 346
+ L TD + LS+ + +L L + + +L T+ L + R L+ L+L+ +
Sbjct: 389 SHCELITDDGILHLSNSTCGHERLRVLELDNCLLITDVALEHLENCRGLERLELYDCQQV 448
Query: 347 TEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSL 388
T I + P ++V + + P +G +G R +
Sbjct: 449 TRAGIKRMRAQLPHVKVHAYFAPVTPPTAVGGSGQRLCRCCV 490
>gi|290982526|ref|XP_002673981.1| predicted protein [Naegleria gruberi]
gi|284087568|gb|EFC41237.1| predicted protein [Naegleria gruberi]
Length = 363
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 127/280 (45%), Gaps = 14/280 (5%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + + Y+ + L SLN+++ R A + ++ M L L++ +++D G K+
Sbjct: 12 NQISGKGAKYISEMKQLTSLNISNNRIGGKGAKY-ISEMKQLTSLNIFNN-RISDEGAKY 69
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ + L L +S + A+G +S ++ L+ L++ ++D + + + +L L++
Sbjct: 70 ISEMKQLISLDISYNQIGAEGAKFISEMKQLTSLNISYNEISDEGAKYISEMKQLTSLNI 129
Query: 196 WGSQVSNRGAAVLKMFPRLSFLN-----LAWTGVTKLPNISSLECLNLSFIQQVGAETDL 250
+ +S GA + +L+ LN ++ G + + L LN+S Q G
Sbjct: 130 SYNDIS-EGAKPISEMKQLTSLNVSNNQISGKGAKYISEMKQLTSLNISDNQISGKGAKY 188
Query: 251 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 310
+ + L L++ Q+SD LS K+LI L++ N ++ +S + +
Sbjct: 189 IGEMK------QLTSLDISNNQISDEGAKFLSEMKQLISLNVSNNQISGKEAKFMSEMKQ 242
Query: 311 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 350
LT+L+I + +++ + L LD+ + E A
Sbjct: 243 LTSLNISNNQISDERAKYISEMKQLTSLDIFNNLISDEGA 282
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 110/236 (46%), Gaps = 23/236 (9%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + E Y+ + L SLN++ S ++ M L L++S +++ G K+
Sbjct: 108 NEISDEGAKYISEMKQLTSLNIS--YNDISEGAKPISEMKQLTSLNVSNN-QISGKGAKY 164
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ + L L +S+ ++ G + ++ L+ LD+ ++D + L + +L L++
Sbjct: 165 ISEMKQLTSLNISDNQISGKGAKYIGEMKQLTSLDISNNQISDEGAKFLSEMKQLISLNV 224
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTG--------VTKLPNISSLECLNLSFIQQVGAE 247
+Q+S + A + +L+ LN++ ++++ ++SL+ N + I GA+
Sbjct: 225 SNNQISGKEAKFMSEMKQLTSLNISNNQISDERAKYISEMKQLTSLDIFN-NLISDEGAK 283
Query: 248 --------TDLVLSLTALQNLNHLER---LNLEQTQVSDATLFPLSTFKELIHLSL 292
T L +S + +++ +++ LN+ Q++D +S K+L L +
Sbjct: 284 YISEMKHLTSLDISYNEISHISEMKQLTSLNISFNQINDEGAKSISEMKQLTSLDM 339
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 42/212 (19%), Positives = 93/212 (43%), Gaps = 26/212 (12%)
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN---- 218
++ L+ L++ ++ + + + +L L++ +++ +GA + +L+ LN
Sbjct: 1 MKQLTSLNVSNNQISGKGAKYISEMKQLTSLNISNNRIGGKGAKYISEMKQLTSLNIFNN 60
Query: 219 -LAWTGVTKLPNISSLECLNLSFIQQVGAE-----------TDLVLSLTALQN------- 259
++ G + + L L++S+ Q+GAE T L +S + +
Sbjct: 61 RISDEGAKYISEMKQLISLDISY-NQIGAEGAKFISEMKQLTSLNISYNEISDEGAKYIS 119
Query: 260 -LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 318
+ L LN+ +S+ P+S K+L L++ N ++ +S + +LT+L+I D
Sbjct: 120 EMKQLTSLNISYNDISEGAK-PISEMKQLTSLNVSNNQISGKGAKYISEMKQLTSLNISD 178
Query: 319 AVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 350
++ G + L LD+ + E A
Sbjct: 179 NQISGKGAKYIGEMKQLTSLDISNNQISDEGA 210
>gi|149643041|ref|NP_001092623.1| F-box/LRR-repeat protein 2 [Bos taurus]
gi|215275223|sp|A6H779.1|FBXL2_BOVIN RecName: Full=F-box/LRR-repeat protein 2; AltName: Full=F-box and
leucine-rich repeat protein 2
gi|148878157|gb|AAI46146.1| FBXL2 protein [Bos taurus]
gi|296475078|tpg|DAA17193.1| TPA: F-box and leucine-rich repeat protein 2 [Bos taurus]
Length = 423
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 161/341 (47%), Gaps = 24/341 (7%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC-LKELDLSRCVK 127
+ LRG V D+ + R + LN+ C ++T S ++L+ LK LDL+ CV
Sbjct: 83 LSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVS 142
Query: 128 VTDAGMKHLL-SISTLEKLWLSETG-LTADGI-ALLSSLQNLSVLDLGGLP-VTDLVLRS 183
+T++ +K + LE L LS +T DG+ AL+ + L L L G + D L+
Sbjct: 143 ITNSSLKGISEGCRHLEYLNLSWCDQITKDGVEALVRGCRGLRALLLRGCTQLEDEALKH 202
Query: 184 LQ-VLTKLEYLDLWG-SQVSNRGAAVL-KMFPRLSFLNLAWTGVTKLPNISSLECLNLSF 240
+Q +L L+L S+V++ G L + PRL L L+ G ++++L LN
Sbjct: 203 IQNYCHELVSLNLQSCSRVTDDGVVQLCRGCPRLQALCLSGCGSLTDASLTALA-LNCPR 261
Query: 241 IQQVGAE-----TDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTF-KELIHLSLR 293
+Q + A TD +L A +N + LE+++LE+ ++D TL LS +L LSL
Sbjct: 262 LQILEAARCSHLTDAGFTLLA-RNCHDLEKMDLEECILITDRTLTQLSIHCPKLQALSLS 320
Query: 294 NASL-TDVSLHQLSS----LSKLTNLSIRDAVL-TNSGLGSFKPPRSLKLLDLHGGWLLT 347
+ L TD + LS+ +L L + + +L T+ L + R L+ L+L+ +T
Sbjct: 321 HCELITDDGILHLSNSPCGHERLRVLELDNCLLITDVALEHLEHCRGLERLELYDCQQVT 380
Query: 348 EDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSL 388
I + P + V + + P G GP R +
Sbjct: 381 RAGIKRMRAQLPHVRVHAYFAPVTPPTAAGGGGPRLCRCCV 421
>gi|320169501|gb|EFW46400.1| tyrosine-protein kinase Src42A [Capsaspora owczarzaki ATCC 30864]
Length = 1286
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 123/274 (44%), Gaps = 26/274 (9%)
Query: 101 RRVTSSALWALTGMTCLKELDLS-RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIAL 159
+TS +A TG+T L ++D+S + A L+ +T L++++ +D +
Sbjct: 215 NNITSIPPYAFTGLTALSQIDVSINLITSIPAFAFAGLTAATYLDLYINQITSISD--SA 272
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL 219
+ L L+ L++ +T ++ + LT L+YL LW +QV++ L+ L L
Sbjct: 273 FTGLTALTFLNMDNNRLTSILSTTFAGLTALQYLYLWSNQVTSIAPNTFAGLTALNSLQL 332
Query: 220 AWTGVTKLP-----NISSLECL----------------NLSFIQQVGAETDLVLSL--TA 256
+T +P ++S L L NL+ +Q + + + S+ A
Sbjct: 333 YDNQITSIPANAFDDLSVLNTLSLNDNLITSVPASAFANLTSLQYLSLFNNRITSIAANA 392
Query: 257 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 316
+L L L+L ++++ ++ L L L N S+T +S SSLS +T + +
Sbjct: 393 FDDLTALGSLHLHTNRITNIPSTAFASLSALTQLHLYNNSITSISAGTFSSLSAVTYMYM 452
Query: 317 RDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 350
D +++ +F SLKLL L G + + A
Sbjct: 453 YDNQISSIPANTFTGMTSLKLLYLSGNQITSVSA 486
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 116/270 (42%), Gaps = 16/270 (5%)
Query: 77 SVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHL 136
SV A A L A + L+ + R+TS + TG+T L L L ++T
Sbjct: 147 SVPAGAFAGLPALKQLQ----LNSNRITSISATLFTGLTALTWLRL-EFNQITSIPASVF 201
Query: 137 LSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLW 196
++ L L L +T+ + L LS +D+ +T + + LT YLDL+
Sbjct: 202 TDLTGLSVLVLRSNNITSIPPYAFTGLTALSQIDVSINLITSIPAFAFAGLTAATYLDLY 261
Query: 197 GSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSL-- 254
+Q+++ + L+FLN+ +L +I S L+ +Q + ++ V S+
Sbjct: 262 INQITSISDSAFTGLTALTFLNM---DNNRLTSILSTTFAGLTALQYLYLWSNQVTSIAP 318
Query: 255 TALQNLNHLERLNLEQTQVSDATLFPLSTFKELI---HLSLRNASLTDVSLHQLSSLSKL 311
L L L L Q+ T P + F +L LSL + +T V ++L+ L
Sbjct: 319 NTFAGLTALNSLQLYDNQI---TSIPANAFDDLSVLNTLSLNDNLITSVPASAFANLTSL 375
Query: 312 TNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 341
LS+ + +T+ +F +L L LH
Sbjct: 376 QYLSLFNNRITSIAANAFDDLTALGSLHLH 405
Score = 38.1 bits (87), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 5/151 (3%)
Query: 77 SVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHL 136
SV A A L + +YL N R+TS A A +T L L L ++T+
Sbjct: 363 SVPASAFANLTSLQYLSLFN----NRITSIAANAFDDLTALGSLHL-HTNRITNIPSTAF 417
Query: 137 LSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLW 196
S+S L +L L +T+ SSL ++ + + ++ + + +T L+ L L
Sbjct: 418 ASLSALTQLHLYNNSITSISAGTFSSLSAVTYMYMYDNQISSIPANTFTGMTSLKLLYLS 477
Query: 197 GSQVSNRGAAVLKMFPRLSFLNLAWTGVTKL 227
G+Q+++ A L+ L+L +T +
Sbjct: 478 GNQITSVSANAFSGLTALTQLSLYLNRITSI 508
>gi|30172690|gb|AAP22333.1| unknown [Homo sapiens]
Length = 325
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 136/286 (47%), Gaps = 21/286 (7%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLK--ELDLSRCVKVTDAGMKHLL-SISTLEK 144
F L++L++A CRR T L L G C K LDLS C +++ G +++ S + +
Sbjct: 2 FHNLQNLSLAYCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGIMH 61
Query: 145 LWLSETGLTADGI--ALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQ-V 200
L +++ D AL+ ++ L G P ++D R+L KL + G++ V
Sbjct: 62 LTINDMPTLTDNCVKALVEKCSRITSLVFTGAPHISDCTFRALSA-CKLRKIRFEGNKRV 120
Query: 201 SNRGAAVL-KMFPRLSFLNLA-WTGVT-----KLPNISSLECLNLSFIQQVGAETDLVLS 253
++ + K +P LS + +A G+T L + L LNL+ ++G + L
Sbjct: 121 TDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIG-DMGLKQF 179
Query: 254 LTALQNLNHLERLNLEQ-TQVSDATLFPLST-FKELIHLSLRNAS-LTDVSLHQLSSLSK 310
L ++ + LNL ++SDA++ LS L +LSLRN LT + + ++
Sbjct: 180 LDGPASM-RIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNIFS 238
Query: 311 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 356
L ++ + ++N GL + LK L + + +T+D I FCK
Sbjct: 239 LVSIDLSGTDISNEGLNVLSRHKKLKELSVSECYRITDDGIQAFCK 284
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 17/206 (8%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV 128
I G V DA + + L + +ADC+ +T S+L +L+ + L L+L+ CV++
Sbjct: 112 IRFEGNKRVTDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRI 171
Query: 129 TDAGMKHLLSIST---LEKLWLSETGLTADG--IALLSSLQNLSVLDLGGLP-VTDLVLR 182
D G+K L + +L LS +D + L NL+ L L +T +
Sbjct: 172 GDMGLKQFLDGPASMRIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIG 231
Query: 183 SLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT------GVTKLPNIS-SLEC 235
+ + L +DL G+ +SN G VL +L L+++ G+ S LE
Sbjct: 232 YIVNIFSLVSIDLSGTDISNEGLNVLSRHKKLKELSVSECYRITDDGIQAFCKSSLILEH 291
Query: 236 LNLSFIQQVGAETDLVLSLTALQNLN 261
L++S+ Q+ +D+++ A+ +N
Sbjct: 292 LDVSYCSQL---SDMIIKALAIYCIN 314
>gi|146104641|ref|XP_001469881.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134074251|emb|CAM72995.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 1208
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 116/240 (48%), Gaps = 14/240 (5%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
M ++G L L++ R++T + L +T L+ L+LS + VTD G L + +L
Sbjct: 543 MQHIGLCDKLVELHLQSLRQLTD--IGVLKDLTALRVLNLSDNL-VTDEGCSALHCMPSL 599
Query: 143 EKLWLSE----TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
++L L+ T L A A + L LD+ ++D + +Q T L YL+L G
Sbjct: 600 QRLNLASCRCITSLAAAFTASGRCMHRLLSLDVSHTNISDAGVLCVQECTDLRYLNLCGC 659
Query: 199 QVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL-NLSFIQQVGAETDLVLSLTAL 257
R + + KM L +LNL T VT L C NL F+ G + V SL
Sbjct: 660 SELRRLSWLQKM-SSLRWLNLGGTRVTDEETKRYLPCTRNLRFLSLSGCSS--VRSLFFA 716
Query: 258 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN-ASLTDVSLHQLSSLSKLTNLSI 316
L LE LNLE T V+D+ L L ++L +LSL + A + DVS L +L L L+I
Sbjct: 717 VKLPQLEYLNLESTSVADSELACLCHCRKLRYLSLESCADIRDVS--PLCALPALLELNI 774
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 33/167 (19%)
Query: 114 MTCLKELDLSRCVKVTD-AGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLG 172
C+ LDL+RC +V +G+++L + L +L L+++ + DG+ ++S+ + L VL L
Sbjct: 1014 FACVSCLDLTRCTEVQCLSGLENLYA---LRELTLTQSSVDNDGVRVVSACETLEVLRLT 1070
Query: 173 GL-PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNIS 231
V+D+ SL L KL L + +QV+N+G + L +LN A
Sbjct: 1071 ECRGVSDV--NSLGGLRKLRVLCVARTQVTNQGLEGIGQCLALQYLNCA----------- 1117
Query: 232 SLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATL 278
EC LS + AL +L HL L+LE+T V DA +
Sbjct: 1118 --ECRYLSDVN-------------ALSSLKHLIELHLERTDVVDAGI 1149
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 115/247 (46%), Gaps = 37/247 (14%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSI-STLEKLWLSETGLTADGIALLS 161
VT + L +LTG T L++L L C ++TD + L ++ TLE+L + T L+ + +
Sbjct: 490 VTDTDLLSLTGCTQLRQLVLDECRQITD--LSFLANLRGTLERLLMPRTLLSNANMQHIG 547
Query: 162 SLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA 220
L L L L +TD+ + L+ LT L L+L + V++ G + L P L LNLA
Sbjct: 548 LCDKLVELHLQSLRQLTDIGV--LKDLTALRVLNLSDNLVTDEGCSALHCMPSLQRLNLA 605
Query: 221 WTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNH-LERLNLEQTQVSDATLF 279
S C+ T L + TA H L L++ T +SDA +
Sbjct: 606 -----------SCRCI-----------TSLAAAFTASGRCMHRLLSLDVSHTNISDAGVL 643
Query: 280 PLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN---LSIRDAVLTNSGLGSFKP-PRSL 335
+ +L +L+L S L +LS L K+++ L++ +T+ + P R+L
Sbjct: 644 CVQECTDLRYLNLCGCS----ELRRLSWLQKMSSLRWLNLGGTRVTDEETKRYLPCTRNL 699
Query: 336 KLLDLHG 342
+ L L G
Sbjct: 700 RFLSLSG 706
>gi|149174147|ref|ZP_01852775.1| hypothetical protein PM8797T_13198 [Planctomyces maris DSM 8797]
gi|148847127|gb|EDL61462.1| hypothetical protein PM8797T_13198 [Planctomyces maris DSM 8797]
Length = 476
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 97/205 (47%), Gaps = 11/205 (5%)
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
VTD ++ + + LWLS + +T GI L L L+L G VTD L L+ L
Sbjct: 267 VTDQILRDFNYWNKVSGLWLSRSKVTDAGIEYLRGATRLYSLNLSGTEVTDATLEHLKGL 326
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTG--VTKLPNISSLECLNLSFIQQVG 245
+L ++L G+QVS RG VL++ + +A+ G V KL N + L LS
Sbjct: 327 PELHSVNLRGTQVSPRG--VLELIASSDSMQIAFPGGWVWKLENAHGFQ-LKLS----SP 379
Query: 246 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 305
A T +L L + L+L+ ++D L L F++L L + N ++ L+ L
Sbjct: 380 AVTGELLKLFGTVRVQ--AYLDLDGIALTDEGLASLGGFEDLRTLRISNTQISSAGLNHL 437
Query: 306 SSLSKLTNLSIRDAVLTNSGLGSFK 330
+ L+ L L +R + + + + +
Sbjct: 438 AGLASLRELDLRGSAVADEDINKLQ 462
>gi|290984426|ref|XP_002674928.1| predicted protein [Naegleria gruberi]
gi|284088521|gb|EFC42184.1| predicted protein [Naegleria gruberi]
Length = 612
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 131/295 (44%), Gaps = 37/295 (12%)
Query: 85 YLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEK 144
Y+G F L LN+ C + L +++ + L L +S +++ G K++ ++ L
Sbjct: 227 YIGKFEQLTCLNINTCS-IDDKVLQSISQLKKLIVLHISEN-EISIEGAKYISKLNQLTS 284
Query: 145 LWLSETGLTADGIALLSSLQNLSVLDLGGLPVTD---LVLRSLQVLTKL----------- 190
L++SE+G+ ++ +S L+ L+ LD+ V + +R+++ LT L
Sbjct: 285 LYISESGIRSEQARYISELKQLTYLDVTKNYVREEGAKYIRNMKKLTTLLVSENYVCEQG 344
Query: 191 -EY---------LDLWGSQVSNRGA---AVLKMFPRLSFL--NLAWTGVTKLPNISSLEC 235
EY LD+ + ++ +G LK LS L + G+ + + +L
Sbjct: 345 AEYISEMTQLTKLDISVNNINKKGVFHICKLKQLTELSILESHFDGEGLEYISELKNLTI 404
Query: 236 LNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 295
LN + + G + + + LN L LN+ ++SD +S K+L LS+ +
Sbjct: 405 LNFPYSEMRG------VGVKYISQLNQLTCLNIPYNRISDEGAKYISELKQLKELSISDN 458
Query: 296 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 350
S++ + L+ L LT L I L N G + L +LD+ + +E A
Sbjct: 459 SISSEGANYLTDLKNLTKLVITGNNLGNDGAMHISELKKLTILDISHNSISSEGA 513
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 128/298 (42%), Gaps = 41/298 (13%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
+N V E Y+ + L +L V++ V ++ MT L +LD+S + G+
Sbjct: 313 KNYVREEGAKYIRNMKKLTTLLVSE-NYVCEQGAEYISEMTQLTKLDIS-VNNINKKGVF 370
Query: 135 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLG---------------------G 173
H+ + L +L + E+ +G+ +S L+NL++L+
Sbjct: 371 HICKLKQLTELSILESHFDGEGLEYISELKNLTILNFPYSEMRGVGVKYISQLNQLTCLN 430
Query: 174 LP---VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-----NLAWTGVT 225
+P ++D + + L +L+ L + + +S+ GA L L+ L NL G
Sbjct: 431 IPYNRISDEGAKYISELKQLKELSISDNSISSEGANYLTDLKNLTKLVITGNNLGNDGAM 490
Query: 226 KLPNISSLECLNLSF--IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLST 283
+ + L L++S I GA+ L +L +L L ++ + + +S
Sbjct: 491 HISELKKLTILDISHNSISSEGAK--------HLSDLKNLTELVIKGNNLGNDGAMSISE 542
Query: 284 FKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 341
K+L HL + + +++D +S +++LT LSI + ++ G+ + +D+
Sbjct: 543 LKQLTHLDVCDNNISDEGFKAISKMNQLTRLSIYENSISGEGVEFIRKMTQSTFIDIQ 600
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 57/319 (17%), Positives = 130/319 (40%), Gaps = 65/319 (20%)
Query: 78 VDAEWMAYLGAFRYLRSLNV------------------------------ADCRRVTSSA 107
+D+E + Y+G + L SL + ++ ++ S +
Sbjct: 98 IDSESVTYIGQLKQLTSLEIQGMDIDDEHVESMAELKQLTSLYISGNYIGSEGVKIISES 157
Query: 108 LWALTGMTC------------------LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
LT + L L+++ + DAG+ +L + L L +S
Sbjct: 158 FNKLTKLNISANYIDNVGAKYISQLKQLTSLEIACNDSIGDAGIIYLSGLEHLTNLDISR 217
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
+ + G + + L+ L++ + D VL+S+ L KL L + +++S GA +
Sbjct: 218 IKIGSGGAQYIGKFEQLTCLNINTCSIDDKVLQSISQLKKLIVLHISENEISIEGAKYIS 277
Query: 210 MFPRLSFLNLAWTG--------VTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLN 261
+L+ L ++ +G +++L ++ L+ + +++++ GA+ ++N+
Sbjct: 278 KLNQLTSLYISESGIRSEQARYISELKQLTYLD-VTKNYVREEGAK--------YIRNMK 328
Query: 262 HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVL 321
L L + + V + +S +L L + ++ + + L +LT LSI ++
Sbjct: 329 KLTTLLVSENYVCEQGAEYISEMTQLTKLDISVNNINKKGVFHICKLKQLTELSILESHF 388
Query: 322 TNSGLGSFKPPRSLKLLDL 340
GL ++L +L+
Sbjct: 389 DGEGLEYISELKNLTILNF 407
>gi|430744264|ref|YP_007203393.1| hypothetical protein Sinac_3437 [Singulisphaera acidiphila DSM
18658]
gi|430015984|gb|AGA27698.1| hypothetical protein Sinac_3437 [Singulisphaera acidiphila DSM
18658]
Length = 329
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Query: 102 RVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLS 161
+V+ S L L + L L L VTDAG++HL ++ L+KL+L +T +T G+A L
Sbjct: 77 KVSDSDLVVLEKLGKLTRLSLV-GTPVTDAGLEHLKGLTELKKLYLVDTKVTDAGLAHLK 135
Query: 162 SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG 204
L+NL VL L G V D + SL+ L L+ L L GS+V++ G
Sbjct: 136 GLKNLEVLSLVGTQVGDAGVDSLKDLPNLQTLFLLGSKVTDEG 178
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 325
++L T+VSD+ L L +L LSL +TD L L L++L L + D +T++G
Sbjct: 71 VSLAITKVSDSDLVVLEKLGKLTRLSLVGTPVTDAGLEHLKGLTELKKLYLVDTKVTDAG 130
Query: 326 LGSFKPPRSLKLLDLHG 342
L K ++L++L L G
Sbjct: 131 LAHLKGLKNLEVLSLVG 147
Score = 41.6 bits (96), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 4/112 (3%)
Query: 237 NLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 296
N+S +++DLV+ L+ L L RL+L T V+DA L L EL L L +
Sbjct: 70 NVSLAITKVSDSDLVV----LEKLGKLTRLSLVGTPVTDAGLEHLKGLTELKKLYLVDTK 125
Query: 297 LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 348
+TD L L L L LS+ + ++G+ S K +L+ L L G + E
Sbjct: 126 VTDAGLAHLKGLKNLEVLSLVGTQVGDAGVDSLKDLPNLQTLFLLGSKVTDE 177
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF 216
+ +L L L+ L L G PVTD L L+ LT+L+ L L ++V++ G A LK L
Sbjct: 83 LVVLEKLGKLTRLSLVGTPVTDAGLEHLKGLTELKKLYLVDTKVTDAGLAHLKGLKNLEV 142
Query: 217 LNLAWT-----GVTKLPNISSLECLNL 238
L+L T GV L ++ +L+ L L
Sbjct: 143 LSLVGTQVGDAGVDSLKDLPNLQTLFL 169
>gi|386333663|ref|YP_006029833.1| type III effector gala6 protein [Ralstonia solanacearum Po82]
gi|334196112|gb|AEG69297.1| type III effector gala6 protein [Ralstonia solanacearum Po82]
Length = 629
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 95/210 (45%), Gaps = 13/210 (6%)
Query: 109 WALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSV 168
AL G T L+ELDL RC + G L ++L L L + G +++ + L++
Sbjct: 400 GALGGSTTLRELDL-RCCAIDPYGASALARNTSLASLHLGSNRIGDSGARAIATSRTLTL 458
Query: 169 LDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW-----TG 223
LDL + D ++L L L+L+G++V + GAA L PRL+ LNL G
Sbjct: 459 LDLSRNNIHDAGAQALAGNGSLTSLNLYGNEVDDDGAAALAHHPRLTSLNLGRNRIGPNG 518
Query: 224 VTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS- 282
L ++L L+LS ++G E LSL+ + L LN+ + + +
Sbjct: 519 AQHLAKSATLTELDLSE-NRIGPEGADALSLSTV-----LTTLNVSDNAIGEKGARAFAE 572
Query: 283 TFKELIHLSLRNASLTDVSLHQLSSLSKLT 312
L L RN + + L + ++LT
Sbjct: 573 KSTSLTSLDARNNGMGEAGAKMLEANTRLT 602
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 116/265 (43%), Gaps = 19/265 (7%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK--VTDAGMKHLLSIS 140
LG + L+S+ +T AL AL ++ LD+SRC V++AG+ LL+
Sbjct: 137 FGQLGKYPALKSVRFKGA--LTLEALKALP--PGVEHLDISRCTGSGVSNAGLA-LLATR 191
Query: 141 TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 200
L+ L L+ + A+G LL++ +L+ L L G + D +L + LDL + +
Sbjct: 192 PLKSLSLNGIEIDAEGARLLATCTSLTSLSLTGCSIGDRAATALARSRSIASLDLSVNMI 251
Query: 201 SNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSFIQQVGAETDLVLSLT 255
GA L P L+ LNL G+ L +L+ LN S +G L +
Sbjct: 252 GPDGARALAGAP-LASLNLHNNGIGDEGALALATSGTLKSLNASN-NGIGDAGVLGFADN 309
Query: 256 ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLS 315
A+ L +LNL + A L L L L L D L++ LT+L+
Sbjct: 310 AV-----LTQLNLAGNMIGPAGARALRCNTSLTELDLSTNRLGDAGAQVLAANRSLTSLN 364
Query: 316 IRDAVLTNSGLGSFKPPRSLKLLDL 340
+R + + G + +LK L+L
Sbjct: 365 LRHNEIGDDGTEALARNTTLKSLNL 389
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 109/284 (38%), Gaps = 46/284 (16%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCV----------- 126
+DAE L L SL++ C + A AL + LDLS +
Sbjct: 203 IDAEGARLLATCTSLTSLSLTGCS-IGDRAATALARSRSIASLDLSVNMIGPDGARALAG 261
Query: 127 -----------KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP 175
+ D G L + TL+ L S G+ G+ + L+ L+L G
Sbjct: 262 APLASLNLHNNGIGDEGALALATSGTLKSLNASNNGIGDAGVLGFADNAVLTQLNLAGNM 321
Query: 176 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL-----AWTGVTKLPNI 230
+ R+L+ T L LDL +++ + GA VL L+ LNL G L
Sbjct: 322 IGPAGARALRCNTSLTELDLSTNRLGDAGAQVLAANRSLTSLNLRHNEIGDDGTEALARN 381
Query: 231 SSLECLNLSF-------IQQVGAETDL-----------VLSLTALQNLNHLERLNLEQTQ 272
++L+ LNLS+ +G T L +AL L L+L +
Sbjct: 382 TTLKSLNLSYNPIGFWGAGALGGSTTLRELDLRCCAIDPYGASALARNTSLASLHLGSNR 441
Query: 273 VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 316
+ D+ ++T + L L L ++ D L+ LT+L++
Sbjct: 442 IGDSGARAIATSRTLTLLDLSRNNIHDAGAQALAGNGSLTSLNL 485
>gi|290970865|ref|XP_002668286.1| predicted protein [Naegleria gruberi]
gi|284081599|gb|EFC35542.1| predicted protein [Naegleria gruberi]
Length = 368
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 122/269 (45%), Gaps = 12/269 (4%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + E + + + L SLN+ + R+ + ++ M L LD+ ++ D G+K
Sbjct: 36 NRIGDEGVKSISEMKQLVSLNIYN-NRIGDEGVKSIIEMKQLTSLDIGGN-RIGDEGVKF 93
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ + L L +SE + +S ++ L+ L++ + D ++S+ + +L+ LD+
Sbjct: 94 ISEMKQLTSLNISENQIGDKEATFISEMKQLTSLNIYNNRIGDEGVKSIIEMKQLKSLDI 153
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWT----GVTKLPNISSLECLNLSFIQQVGAETDLV 251
+Q+S GA + +L LN+ GV + + L LN++ ++G +
Sbjct: 154 GRNQISVEGAKFISEMKQLVSLNIYNNRIDEGVKSISEMKQLTSLNIAE-NRIGDKEAKF 212
Query: 252 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+S + L L++ ++ D +S K+L L++ N + D + + + +L
Sbjct: 213 IS-----EMKQLTSLDIYNNRIGDEGAIFISKMKQLTSLNIYNNRIGDEGVKSIIEMKRL 267
Query: 312 TNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
T+L I + + G+ + L LD+
Sbjct: 268 TSLDIGRNRIGDEGVKFISEMKQLASLDI 296
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 73/143 (51%), Gaps = 2/143 (1%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + E ++ + L SLN+ + R+ + ++ M L LD+ R ++ D G+K
Sbjct: 227 NRIGDEGAIFISKMKQLTSLNIYN-NRIGDEGVKSIIEMKRLTSLDIGRN-RIGDEGVKF 284
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ + L L +SE + +G+ +S ++ L+ L++ + D +S+ + +L+ LD+
Sbjct: 285 ISEMKQLASLDISENRIGDEGVKSISEMKQLTSLNISENRIGDEGAKSISEMKRLKSLDI 344
Query: 196 WGSQVSNRGAAVLKMFPRLSFLN 218
G+Q+ + G + +L+ LN
Sbjct: 345 GGNQIGDEGVKFISEMKQLASLN 367
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 111/238 (46%), Gaps = 13/238 (5%)
Query: 127 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 186
++ D K + + L L + + +G+ +S ++ L L++ + D ++S+
Sbjct: 13 QIGDKEAKFISEMKQLTSLDIYNNRIGDEGVKSISEMKQLVSLNIYNNRIGDEGVKSIIE 72
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV-----TKLPNISSLECLNLSFI 241
+ +L LD+ G+++ + G + +L+ LN++ + T + + L LN+ +
Sbjct: 73 MKQLTSLDIGGNRIGDEGVKFISEMKQLTSLNISENQIGDKEATFISEMKQLTSLNI-YN 131
Query: 242 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 301
++G E + ++ + L+ L++ + Q+S +S K+L+ L++ N + D
Sbjct: 132 NRIGDE-----GVKSIIEMKQLKSLDIGRNQISVEGAKFISEMKQLVSLNIYNNRI-DEG 185
Query: 302 LHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHP 359
+ +S + +LT+L+I + + + + L LD++ + E AI KM
Sbjct: 186 VKSISEMKQLTSLNIAENRIGDKEAKFISEMKQLTSLDIYNNRIGDEGAIF-ISKMKQ 242
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 80/168 (47%), Gaps = 7/168 (4%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
EN + + ++ + L SL++ + R A++ ++ M L L++ ++ D G+K
Sbjct: 202 ENRIGDKEAKFISEMKQLTSLDIYNNRIGDEGAIF-ISKMKQLTSLNIYNN-RIGDEGVK 259
Query: 135 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 194
++ + L L + + +G+ +S ++ L+ LD+ + D ++S+ + +L L+
Sbjct: 260 SIIEMKRLTSLDIGRNRIGDEGVKFISEMKQLASLDISENRIGDEGVKSISEMKQLTSLN 319
Query: 195 LWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLN 237
+ +++ + GA + RL L++ GV + + L LN
Sbjct: 320 ISENRIGDEGAKSISEMKRLKSLDIGGNQIGDEGVKFISEMKQLASLN 367
>gi|414586492|tpg|DAA37063.1| TPA: hypothetical protein ZEAMMB73_067914 [Zea mays]
Length = 356
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 74/174 (42%), Gaps = 24/174 (13%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV------- 128
+ + + L F L SL++ C VT+ A + L LDL RC K+
Sbjct: 170 DQISEHGLKTLSGFSNLTSLSIKKCAAVTAEGAKAFANLVNLVNLDLERCPKINGGLIHL 229
Query: 129 -----------------TDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDL 171
TD+ MK+L ++ L +L LS ++A G++ L L L L+L
Sbjct: 230 KGLKKLEKLNLRYCNGITDSDMKYLSDLTNLRELQLSSCKISAFGVSYLRGLHKLGHLNL 289
Query: 172 GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 225
G VT + L + L L L+L + + G LK +L L+L + +T
Sbjct: 290 EGCAVTAVCLEVISELASLVLLNLSRCGICDEGCENLKGLTKLKALSLGFNQIT 343
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
Query: 100 CRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIAL 159
C +T S + L+ +T L+EL LS C K++ G+ +L + L L L +TA + +
Sbjct: 243 CNGITDSDMKYLSDLTNLRELQLSSC-KISAFGVSYLRGLHKLGHLNLEGCAVTAVCLEV 301
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
+S L +L +L+L + D +L+ LTKL+ L L +Q+++
Sbjct: 302 ISELASLVLLNLSRCGICDEGCENLKGLTKLKALSLGFNQITD 344
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 84/198 (42%), Gaps = 16/198 (8%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
++SL C +++ L L+G + L L + +C VT G K ++ L L L
Sbjct: 161 MQSLACDYCDQISEHGLKTLSGFSNLTSLSIKKCAAVTAEGAKAFANLVNLVNLDLERCP 220
Query: 152 LTADG-IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKM 210
G I L + + +TD ++ L LT L L L ++S G + L+
Sbjct: 221 KINGGLIHLKGLKKLEKLNLRYCNGITDSDMKYLSDLTNLRELQLSSCKISAFGVSYLRG 280
Query: 211 FPRLSFLNLAWTGVTK-----LPNISSLECLNLS--FIQQVGAETDLVLSLTALQNLNHL 263
+L LNL VT + ++SL LNLS I G E L+ L L
Sbjct: 281 LHKLGHLNLEGCAVTAVCLEVISELASLVLLNLSRCGICDEGCEN--------LKGLTKL 332
Query: 264 ERLNLEQTQVSDATLFPL 281
+ L+L Q++DA L L
Sbjct: 333 KALSLGFNQITDACLIHL 350
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Query: 73 RGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAG 132
R N + M YL LR L ++ C ++++ + L G+ L L+L C VT
Sbjct: 241 RYCNGITDSDMKYLSDLTNLRELQLSSC-KISAFGVSYLRGLHKLGHLNLEGCA-VTAVC 298
Query: 133 MKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
++ + +++L L LS G+ +G L L L L LG +TD L L+V+
Sbjct: 299 LEVISELASLVLLNLSRCGICDEGCENLKGLTKLKALSLGFNQITDACLIHLKVM 353
>gi|46445832|ref|YP_007197.1| F-box protein [Candidatus Protochlamydia amoebophila UWE25]
gi|46399473|emb|CAF22922.1| putative F-box protein [Candidatus Protochlamydia amoebophila
UWE25]
Length = 329
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 76/154 (49%), Gaps = 3/154 (1%)
Query: 56 FPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMT 115
F +L F + EAI + + L + L+ L + CR +T L L +
Sbjct: 175 FEKILNHFSNEIEAIHFSDNVYLTDAHLLTLKNCKNLKVLQLQACRNLTDVGLAHLAPLE 234
Query: 116 CLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLGGL 174
LK L+LS C +TDAG+ HL + L+ L L LT G+A L L L L+L G
Sbjct: 235 ALKHLNLSECDNLTDAGLAHLTLLIALQYLDLKGCAKLTDAGLARLRPLVALQHLNLKGC 294
Query: 175 P-VTDLVLRSLQVLTKLEYLDLWG-SQVSNRGAA 206
+TD+ L L+ L L++LDL G + +++ G A
Sbjct: 295 DNLTDIGLAHLRPLVALQHLDLDGCNNLTDAGLA 328
>gi|290996590|ref|XP_002680865.1| predicted protein [Naegleria gruberi]
gi|284094487|gb|EFC48121.1| predicted protein [Naegleria gruberi]
Length = 304
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 40/225 (17%)
Query: 129 TDAGMKHLLSIST---LEKLWLSETGLTADGIALLSSLQNLSVL----DLGGLP------ 175
TD G + ++ IS LE L L E L A+ +A L L NL L D G
Sbjct: 68 TDIGKQSIVYISEMKLLESLILGELRLEAESVAYLKKLTNLKELNCSPDSYGTSAHLSEM 127
Query: 176 --VTDLVLR----------SLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT- 222
+ L+L ++ LT L +L LW S ++++GA L + LNL+
Sbjct: 128 KSLNSLILNVKYNKEEDIENISKLTSLNHLKLWNSNINSKGAEFLSNISSFTSLNLSGNV 187
Query: 223 ----GVTKLPNISSLECLNLSF--IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDA 276
G+ + +++L LNLS+ + G +T L NL L LNL + D
Sbjct: 188 IRDAGLVNIGKLANLTFLNLSYNGLSDSG--------ITNLGNLRKLTDLNLNGNNIEDQ 239
Query: 277 TLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVL 321
+S F L +L LRN +T + LS+L+ L +L +R+ L
Sbjct: 240 GAKIISKFSHLKYLQLRNNQITKNGANYLSNLNSLYSLDLRENKL 284
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 88/190 (46%), Gaps = 25/190 (13%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCL-------KELDLSRCV 126
GE ++AE +AYL L+ LN + TS+ L + + L KE D+
Sbjct: 90 GELRLEAESVAYLKKLTNLKELNCSPDSYGTSAHLSEMKSLNSLILNVKYNKEEDIENIS 149
Query: 127 KVTD-------------AGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 173
K+T G + L +IS+ L LS + G+ + L NL+ L+L
Sbjct: 150 KLTSLNHLKLWNSNINSKGAEFLSNISSFTSLNLSGNVIRDAGLVNIGKLANLTFLNLSY 209
Query: 174 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LP 228
++D + +L L KL L+L G+ + ++GA ++ F L +L L +TK L
Sbjct: 210 NGLSDSGITNLGNLRKLTDLNLNGNNIEDQGAKIISKFSHLKYLQLRNNQITKNGANYLS 269
Query: 229 NISSLECLNL 238
N++SL L+L
Sbjct: 270 NLNSLYSLDL 279
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 112/260 (43%), Gaps = 27/260 (10%)
Query: 102 RVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLS 161
R+T++ +++ + L LDLS VTDA +K + I ++ +L + T + I +S
Sbjct: 22 RITNTKIFS--KLKNLTALDLSYNELVTDAHVKEISLIPSMRRLNIFCTDIGKQSIVYIS 79
Query: 162 SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL----DLWGSQVSNRGAAVLKMFPRLS-- 215
++ L L LG L + + L+ LT L+ L D +G+ +A L L+
Sbjct: 80 EMKLLESLILGELRLEAESVAYLKKLTNLKELNCSPDSYGT------SAHLSEMKSLNSL 133
Query: 216 FLNLAWTGVTKLPNISSLECLNL-----SFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 270
LN+ + + NIS L LN S I GAE L N++ LNL
Sbjct: 134 ILNVKYNKEEDIENISKLTSLNHLKLWNSNINSKGAE--------FLSNISSFTSLNLSG 185
Query: 271 TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 330
+ DA L + L L+L L+D + L +L KLT+L++ + + G
Sbjct: 186 NVIRDAGLVNIGKLANLTFLNLSYNGLSDSGITNLGNLRKLTDLNLNGNNIEDQGAKIIS 245
Query: 331 PPRSLKLLDLHGGWLLTEDA 350
LK L L + A
Sbjct: 246 KFSHLKYLQLRNNQITKNGA 265
>gi|355688265|gb|AER98447.1| F-box and leucine-rich repeat protein 2 [Mustela putorius furo]
Length = 358
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 163/342 (47%), Gaps = 26/342 (7%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC-LKELDLSRCVK 127
+ LRG V D+ + R + LN+ C ++T S ++L+ LK LDL+ CV
Sbjct: 18 LSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVS 77
Query: 128 VTDAGMKHLL-SISTLEKLWLS-ETGLTADGI-ALLSSLQNLSVLDLGGLP-VTDLVLRS 183
+T++ +K + LE L LS +T DGI AL+ + L L L G + D L+
Sbjct: 78 ITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKH 137
Query: 184 LQ-VLTKLEYLDLWG-SQVSNRGAA-VLKMFPRLSFLNLAWTGVTKLPNIS----SLECL 236
+Q +L L+L S++++ G + + RL L L +G + L + S +L C
Sbjct: 138 IQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCL--SGCSNLTDASLTALALNCP 195
Query: 237 NLSFIQQVGAE--TDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTF-KELIHLSL 292
L ++ TD +L A +N + LE+++LE+ ++D+TL LS +L LSL
Sbjct: 196 RLQILEAARCSHLTDAGFTLLA-RNCHDLEKMDLEECILITDSTLIQLSVHCPKLQALSL 254
Query: 293 RNASL-TDVSLHQLSSLS----KLTNLSIRDAVL-TNSGLGSFKPPRSLKLLDLHGGWLL 346
+ L TD + LS+ + +L L + + +L T+ L + R L+ L+L+ +
Sbjct: 255 SHCELITDDGILHLSNSTCGHERLRVLELDNCLLITDVALEHLENCRGLERLELYDCQQV 314
Query: 347 TEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSL 388
T I + P ++V + + P +G +G R +
Sbjct: 315 TRAGIKRMRAQLPHVKVHAYFAPVTPPTAVGGSGQRLCRCCV 356
>gi|290973212|ref|XP_002669343.1| predicted protein [Naegleria gruberi]
gi|284082889|gb|EFC36599.1| predicted protein [Naegleria gruberi]
Length = 440
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 123/270 (45%), Gaps = 13/270 (4%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ A + L SLN+ D + + ++ M L L++ +V D G K+L + L L
Sbjct: 115 ISAMKQLTSLNIYD-NGIGDEEIKYISEMKQLTSLNIGYN-RVGDEGAKYLSEMKQLTSL 172
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+ + +G LS ++ L+ L++G + ++ + + +L L++ ++VSN GA
Sbjct: 173 NIGYNRVGIEGAKYLSEMEQLTSLNIGYSRIGIEGVKYISEMKQLTSLNISKNEVSNEGA 232
Query: 206 AVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNL 260
L +L LN+ GV L + L L++ + ++G E + + +
Sbjct: 233 KYLSEMKQLRLLNIYHNEIGDEGVKYLSEMKQLTSLHIGY-NRIGLE-----GVKLISEM 286
Query: 261 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV 320
L L++ + ++SD LS ++L L++ + + + +S + +LT+L+I
Sbjct: 287 EQLTSLDISENEISDEGAKYLSEMEQLTSLNIDYSRIGLEGVKYISEMKQLTSLTIAYNR 346
Query: 321 LTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 350
+ G + L+LLD+ + E A
Sbjct: 347 IGIKGAKLISEMKQLRLLDISNNEISDEGA 376
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 125/287 (43%), Gaps = 20/287 (6%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N V E YL + L SLN+ RV L+ M L L++ ++ G+
Sbjct: 151 GYNRVGDEGAKYLSEMKQLTSLNIG-YNRVGIEGAKYLSEMEQLTSLNIGYS-RIGIEGV 208
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
K++ + L L +S+ ++ +G LS ++ L +L++ + D ++ L + +L L
Sbjct: 209 KYISEMKQLTSLNISKNEVSNEGAKYLSEMKQLRLLNIYHNEIGDEGVKYLSEMKQLTSL 268
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSFIQQVGAET 248
+ +++ G ++ +L+ L+++ G L + L LN+ + ++G E
Sbjct: 269 HIGYNRIGLEGVKLISEMEQLTSLDISENEISDEGAKYLSEMEQLTSLNIDY-SRIGLE- 326
Query: 249 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 308
+ + + L L + ++ +S K+L L + N ++D LS +
Sbjct: 327 ----GVKYISEMKQLTSLTIAYNRIGIKGAKLISEMKQLRLLDISNNEISDEGAKYLSEM 382
Query: 309 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL-------HGGWLLTE 348
+L +L I + + G+ + L+LLD+ G LL+E
Sbjct: 383 KQLISLYISEIGIGIKGVKYISEMKQLRLLDITRNRIGKEGAKLLSE 429
>gi|225452694|ref|XP_002276873.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
kinase At4g08850-like [Vitis vinifera]
Length = 783
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 111/237 (46%), Gaps = 20/237 (8%)
Query: 114 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 173
+T L LDLS ++ + + +++ L L LS +T + +L L L L G
Sbjct: 123 LTKLTHLDLSYN-QLNGNIPQQMYTLTELTHLDLSSNQMTGPIPHQIGTLTELIFLHLSG 181
Query: 174 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLP 228
+T + S LTKL +LDL +Q++ + L FL+L+WT +T L
Sbjct: 182 NELTGAIPSSFGRLTKLTHLDLSSNQLTGPIPHPIGTLTELIFLHLSWTELTGAIPSSLG 241
Query: 229 NISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELI 288
+++ L L+LS+ Q G+ + + +LT L L+L Q+S + + T EL
Sbjct: 242 HLTKLTHLDLSYNQLNGSISHQMYTLTELT------HLDLSNNQLSGSIPHQIGTLTELT 295
Query: 289 HLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPP----RSLKLLDLH 341
+L L + LT L SL+KLT+L++ N GS P + L LDLH
Sbjct: 296 YLDLSWSELTGAMPSSLGSLTKLTSLNL----CMNQINGSIPPEIGNIKDLVSLDLH 348
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 107/229 (46%), Gaps = 26/229 (11%)
Query: 135 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 194
+L S+ +L L LS GL + SL L+ LDL + + + + LT+L +LD
Sbjct: 95 NLSSLPSLNFLILSGMGLNGSISDEIGSLTKLTHLDLSYNQLNGNIPQQMYTLTELTHLD 154
Query: 195 LWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-KLPN----ISSLECLNLSFIQ------- 242
L +Q++ + L FL+L+ +T +P+ ++ L L+LS Q
Sbjct: 155 LSSNQMTGPIPHQIGTLTELIFLHLSGNELTGAIPSSFGRLTKLTHLDLSSNQLTGPIPH 214
Query: 243 QVGAETDLV---LSLT--------ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 291
+G T+L+ LS T +L +L L L+L Q++ + + T EL HL
Sbjct: 215 PIGTLTELIFLHLSWTELTGAIPSSLGHLTKLTHLDLSYNQLNGSISHQMYTLTELTHLD 274
Query: 292 LRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN---SGLGSFKPPRSLKL 337
L N L+ HQ+ +L++LT L + + LT S LGS SL L
Sbjct: 275 LSNNQLSGSIPHQIGTLTELTYLDLSWSELTGAMPSSLGSLTKLTSLNL 323
>gi|345317140|ref|XP_001521021.2| PREDICTED: F-box/LRR-repeat protein 2 [Ornithorhynchus anatinus]
Length = 455
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 160/342 (46%), Gaps = 26/342 (7%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC-LKELDLSRCVK 127
+ LRG V D+ + R + LN+ C ++T S ++L+ LK LDL+ CV
Sbjct: 115 LSLRGCLGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSKFCSKLKHLDLTSCVS 174
Query: 128 VTDAGMKHLL-SISTLEKLWLSETG-LTADGI-ALLSSLQNLSVLDLGGLP-VTDLVLRS 183
+T++ +K L LE L LS +T +GI AL+ L L L G + D L+
Sbjct: 175 ITNSSLKGLSEGCRNLEHLNLSWCDQVTKEGIEALVKGCSGLKALFLRGCTQLEDEALKH 234
Query: 184 LQV-LTKLEYLDLWG-SQVSNRG-AAVLKMFPRLSFLNLAWTGVTKLPNIS----SLECL 236
+Q +L L+L +Q+S+ G + + RL L +G + L + S L C
Sbjct: 235 IQNHCHELVILNLQSCTQISDEGIVKICRGCHRLQ--ALCVSGCSNLTDASLTALGLNCP 292
Query: 237 NLSFIQQVGAE--TDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTF-KELIHLSL 292
+L ++ TD +L A +N + LE+++LE+ ++D+TL LS L LSL
Sbjct: 293 SLKILEAARCSHLTDAGFTLLA-RNCHELEKMDLEECILITDSTLIQLSVHCPRLQALSL 351
Query: 293 RNASL-TDVSLHQLSS----LSKLTNLSIRDAVL-TNSGLGSFKPPRSLKLLDLHGGWLL 346
+ L TD + LSS +L L + + +L T+ L + RSL+ ++L+ +
Sbjct: 352 SHCELITDDGILHLSSSPCGQERLQVLELDNCLLITDVTLEHLESCRSLERIELYDCQQV 411
Query: 347 TEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSL 388
T I + P ++V + + P +G +G R +
Sbjct: 412 TRAGIKRIRAHLPDVKVHAYFAPVTPPPSVGGSGQRLCRCCV 453
>gi|194221510|ref|XP_001490026.2| PREDICTED: f-box/LRR-repeat protein 2-like [Equus caballus]
Length = 508
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 163/342 (47%), Gaps = 26/342 (7%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC-LKELDLSRCVK 127
+ LRG V D+ + R + LN+ C ++T S ++L+ LK LDL+ CV
Sbjct: 168 LSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVS 227
Query: 128 VTDAGMKHLL-SISTLEKLWLSETG-LTADGI-ALLSSLQNLSVLDLGGLP-VTDLVLRS 183
+T++ +K + LE L LS +T DGI AL+ + L L L G + D L+
Sbjct: 228 ITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKH 287
Query: 184 LQ-VLTKLEYLDLWG-SQVSNRGAA-VLKMFPRLSFLNLAWTGVTKLPNIS----SLECL 236
+Q +L L+L S++++ G + + RL L L +G + L + S +L C
Sbjct: 288 IQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCL--SGCSNLTDASLTALALNCP 345
Query: 237 NLSFIQQVGAE--TDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTF-KELIHLSL 292
L ++ TD +L A +N + LE+++LE+ ++D+TL LS +L LSL
Sbjct: 346 RLQILEAARCSHLTDAGFTLLA-RNCHDLEKMDLEECILITDSTLIQLSIHCPKLQALSL 404
Query: 293 RNASL-TDVSLHQLSSLS----KLTNLSIRDAVL-TNSGLGSFKPPRSLKLLDLHGGWLL 346
+ L TD + LS+ + +L L + + +L T+ L + R L+ L+L+ +
Sbjct: 405 SHCELITDDGILHLSNSTCGHERLRVLELDNCLLITDVALEHLENCRGLERLELYDCQQV 464
Query: 347 TEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSL 388
T I + P ++V + + P +G +G R +
Sbjct: 465 TRAGIKRMRAQLPHVKVHAYFAPVTPPTAVGGSGQRLCRCCV 506
>gi|374850803|dbj|BAL53782.1| hypothetical conserved protein, partial [uncultured planctomycete]
Length = 351
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 114/253 (45%), Gaps = 25/253 (9%)
Query: 102 RVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLS 161
R+T + + L+EL L+ V D +++L ++ +LE L L+ T + G+ +
Sbjct: 99 RLTPQGWRKIAELRALRELYLADS-NVDDEDLQYLANLGSLETLDLAWTPMKGTGLKHVG 157
Query: 162 SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRL------- 214
++NL VL L + D + + LTKLE LDL G+ V+++G + L
Sbjct: 158 QIRNLRVLLLTHTKIADEHIAQIVPLTKLEKLDLGGTLVTDKGMEFVSRLANLKDLRCPE 217
Query: 215 SFLNLAWTGVTKLPNISSLECLNLSFIQQVGAET--------DLVLSLTALQN------- 259
S + A + +L + +L CL+ S + G E+ L LS T + +
Sbjct: 218 SLTDDATKLLARLVQLRTL-CLSSSCVTSQGVESLKTLSELRSLDLSRTKIDDRALDQIT 276
Query: 260 -LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 318
L+ LE L L +T ++DA + F L L L ++D L ++ + L L++
Sbjct: 277 VLSKLEHLLLSETNITDAVAPVIGRFMNLKSLFLDGTKISDSVLQEVGKVHTLERLNLSK 336
Query: 319 AVLTNSGLGSFKP 331
+T GL P
Sbjct: 337 TAVTGEGLQHLTP 349
>gi|32477504|ref|NP_870498.1| adenylate cyclase regulatory protein [Rhodopirellula baltica SH 1]
gi|32448058|emb|CAD77575.1| conserved hypothetical protein-putative adenylate cyclase
regulatory protein [Rhodopirellula baltica SH 1]
Length = 513
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 128/293 (43%), Gaps = 21/293 (7%)
Query: 79 DAEWMAYLGAFRYLRSLN---------VADCRRVTSSALWALTGMTCLKELDLSRCVKVT 129
D E +A L Y+ + N +A+ + +L L G+ E + +
Sbjct: 121 DPEAVAALTEAGYILTKNDDGNVVEFSIANQKGGIEESLQHLRGIPNTTEATFN-GPGID 179
Query: 130 DAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK 189
DAGM++L S++ L++L L++T +T + + + +L L L VTD L L L+K
Sbjct: 180 DAGMENLKSLANLKRLTLADTAITDQTLKTVGEMTSLDALFLRRTGVTDEGLELLTGLSK 239
Query: 190 LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSFIQQV 244
L +DL + + + G L L + L + VT KL + L+ +N ++ +
Sbjct: 240 LRAIDLRNTNIGDAGMDSLAKIKTLIDVKLEKSKVTDEGLVKLAPL-PLKSINFNYCTTI 298
Query: 245 GAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQ 304
T +L T LE L + ++++D ++ L +L L +R +T +
Sbjct: 299 NGPTMKMLGQTPT-----LENLQGDYSKINDESMAELKGLSKLKRLRIRGCDVTGEGIQH 353
Query: 305 LSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKM 357
++ L +RD+ + + GL ++ +D+ L + + I Q K+
Sbjct: 354 IAGNKALARFELRDSSVDDDGLKVISQLPAVTHVDISECRLASPEGIAQLGKL 406
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 114/254 (44%), Gaps = 15/254 (5%)
Query: 69 AIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV 128
AI+LR N DA M L + L + + + +VT L L + LK ++ + C +
Sbjct: 242 AIDLRNTNIGDA-GMDSLAKIKTLIDVKL-EKSKVTDEGLVKLAPLP-LKSINFNYCTTI 298
Query: 129 TDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLT 188
MK L TLE L + + + +A L L L L + G VT ++ +
Sbjct: 299 NGPTMKMLGQTPTLENLQGDYSKINDESMAELKGLSKLKRLRIRGCDVTGEGIQHIAGNK 358
Query: 189 KLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSFIQ 242
L +L S V + G V+ P ++ ++++ G+ +L ++ L L L +
Sbjct: 359 ALARFELRDSSVDDDGLKVISQLPAVTHVDISECRLASPEGIAQLGKLTGLTYLGL-WET 417
Query: 243 QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 302
+ ET L +L +LE LNL+ T V+D +L L +L L++ L D S
Sbjct: 418 KTNDET-----LAGFGDLVNLEELNLKSTAVTDESLPVLMKMTKLKTLNVAGTQLGDDSF 472
Query: 303 HQLSSLSKLTNLSI 316
+L+ L L ++++
Sbjct: 473 LELAKLPNLKSMNV 486
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 94/222 (42%), Gaps = 28/222 (12%)
Query: 77 SVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHL 136
+++ M LG L +L D ++ ++ L G++ LK L + C VT G++H+
Sbjct: 297 TINGPTMKMLGQTPTLENLQ-GDYSKINDESMAELKGLSKLKRLRIRGC-DVTGEGIQHI 354
Query: 137 LSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV-TDLVLRSLQVLTKLEYLDL 195
L + L ++ + DG+ ++S L ++ +D+ + + + L LT L YL L
Sbjct: 355 AGNKALARFELRDSSVDDDGLKVISQLPAVTHVDISECRLASPEGIAQLGKLTGLTYLGL 414
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLT 255
W ++ ++ A L LNL T VT SL
Sbjct: 415 WETKTNDETLAGFGDLVNLEELNLKSTAVTDE-------------------------SLP 449
Query: 256 ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 297
L + L+ LN+ TQ+ D + L+ L +++ N S+
Sbjct: 450 VLMKMTKLKTLNVAGTQLGDDSFLELAKLPNLKSMNVANTSI 491
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 125/288 (43%), Gaps = 32/288 (11%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
VT L LTG++ L+ +DL R + DAGM L I TL + L ++ +T +G+ L+
Sbjct: 226 VTDEGLELLTGLSKLRAIDL-RNTNIGDAGMDSLAKIKTLIDVKLEKSKVTDEGLVKLAP 284
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT 222
L S+ + ++ L LE L S++++ A LK +L L +
Sbjct: 285 LPLKSINFNYCTTINGPTMKMLGQTPTLENLQGDYSKINDESMAELKGLSKLKRLRIRGC 344
Query: 223 GVT--KLPNI-------------SSLECLNLSFIQQVGAETDLVLS---------LTALQ 258
VT + +I SS++ L I Q+ A T + +S + L
Sbjct: 345 DVTGEGIQHIAGNKALARFELRDSSVDDDGLKVISQLPAVTHVDISECRLASPEGIAQLG 404
Query: 259 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 318
L L L L +T+ +D TL L L+L++ ++TD SL L ++KL L++
Sbjct: 405 KLTGLTYLGLWETKTNDETLAGFGDLVNLEELNLKSTAVTDESLPVLMKMTKLKTLNVAG 464
Query: 319 AVLTNSG---LGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEV 363
L + L +S+ + + G+ D I + HP ++V
Sbjct: 465 TQLGDDSFLELAKLPNLKSMNVANTSIGF----DVIDTLAENHPDLQV 508
>gi|290974964|ref|XP_002670214.1| predicted protein [Naegleria gruberi]
gi|284083770|gb|EFC37470.1| predicted protein [Naegleria gruberi]
Length = 383
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 128/292 (43%), Gaps = 19/292 (6%)
Query: 62 VFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELD 121
V K + E R E + +++M + ++ R R + S + +T M LK LD
Sbjct: 81 VIKFKQKFTETRIELCMKSQFMNSIVNLKFSR-------RLLDSIQVKFITEMKQLKSLD 133
Query: 122 LSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVL 181
+S ++ D G K + + L L + + G+ ++ +++L+ LD+ G + D +
Sbjct: 134 ISEN-RIGDEGAKFISEMKQLTSLDIGYNRIGVVGVKFINEMKHLTSLDISGNGIGDEGV 192
Query: 182 RSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-----NLAWTGVTKLPNISSLECL 236
+S+ L +L LD +++ ++GA + L+ L ++ G + + L+ L
Sbjct: 193 KSISELKQLTSLDFNNNRIGDKGAKSISEMKHLTLLSINNNHIGAEGARFISEMKQLKSL 252
Query: 237 NLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 296
++ + Q+G E + + L L++ ++ + P+S K+L L +
Sbjct: 253 SI-YNNQIGDE-----GAKFINEMKQLTSLDISGNEIGVEGVIPISEMKQLTSLEIGGNQ 306
Query: 297 LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 348
+ D +S + +L +L+I + + G + LK L + G + E
Sbjct: 307 IGDEGAKLISEMKQLISLNIYNNQIGIEGAKFISEMKQLKSLYIGGNQIGDE 358
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 108/247 (43%), Gaps = 13/247 (5%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
EN + E ++ + L SL++ R+ + + M L LD+S + D G+K
Sbjct: 136 ENRIGDEGAKFISEMKQLTSLDIG-YNRIGVVGVKFINEMKHLTSLDISGN-GIGDEGVK 193
Query: 135 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 194
+ + L L + + G +S +++L++L + + R + + +L+ L
Sbjct: 194 SISELKQLTSLDFNNNRIGDKGAKSISEMKHLTLLSINNNHIGAEGARFISEMKQLKSLS 253
Query: 195 LWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSFIQQVGAETD 249
++ +Q+ + GA + +L+ L+++ GV + + L L + Q+G E
Sbjct: 254 IYNNQIGDEGAKFINEMKQLTSLDISGNEIGVEGVIPISEMKQLTSLEIGG-NQIGDEGA 312
Query: 250 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 309
++S + L LN+ Q+ +S K+L L + + D + +S +
Sbjct: 313 KLIS-----EMKQLISLNIYNNQIGIEGAKFISEMKQLKSLYIGGNQIGDEGVKFISEMK 367
Query: 310 KLTNLSI 316
+LT+L I
Sbjct: 368 QLTSLDI 374
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 91/209 (43%), Gaps = 17/209 (8%)
Query: 180 VLRSLQV-----LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT--GVTKLPNISS 232
+L S+QV + +L+ LD+ +++ + GA + +L+ L++ + GV + I+
Sbjct: 114 LLDSIQVKFITEMKQLKSLDISENRIGDEGAKFISEMKQLTSLDIGYNRIGVVGVKFINE 173
Query: 233 LECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL 292
++ L I G + V S++ L+ L L+ ++ D +S K L LS+
Sbjct: 174 MKHLTSLDISGNGIGDEGVKSISELK---QLTSLDFNNNRIGDKGAKSISEMKHLTLLSI 230
Query: 293 RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAIL 352
N + +S + +L +LSI + + + G + L LD+ G + E I
Sbjct: 231 NNNHIGAEGARFISEMKQLKSLSIYNNQIGDEGAKFINEMKQLTSLDISGNEIGVEGVI- 289
Query: 353 QFCKMHPRIEVWHELSVICPSDQIGSNGP 381
P E+ S+ +QIG G
Sbjct: 290 ------PISEMKQLTSLEIGGNQIGDEGA 312
>gi|158429246|pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 121/226 (53%), Gaps = 18/226 (7%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L+ S +VTD +K L +++TLE+L
Sbjct: 122 IDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLNFSSN-QVTD--LKPLANLTTLERL 178
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 179 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIGT 234
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++ + + +++ L L L
Sbjct: 235 --LASLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTN 287
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 288 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 329
>gi|291237888|ref|XP_002738864.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 871
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 124/273 (45%), Gaps = 52/273 (19%)
Query: 88 AFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWL 147
A + L+ LN++ CR++T K LD + +T K+L+++S L
Sbjct: 524 ALKRLKHLNLSSCRQLTD------------KVLDTVKADNITLLVFKYLVTLS------L 565
Query: 148 SETGLTADGIA--LLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
ET +T G+ L SS LS L+L VTD L++L LT L+ L L G+++S+
Sbjct: 566 EETSVTDRGMQSYLQSSPSTLSHLNLNKTSVTDATLQALSALTHLKSLGLEGTKISH--L 623
Query: 206 AVLKMFPRLSFLNLAWTGVTKLP-------------NISSLECLN------------LSF 240
LK +L LN+ T + + NIS+++C+N L+
Sbjct: 624 DCLKALSKLQSLNICSTNLPAIALSHLKSLTSLSSLNISNIDCMNGDEALQCLSGLKLTH 683
Query: 241 IQQVGAETDLVLSLTALQNLNHLERLNL-EQTQVSDATLFPLSTFKELIHLSLRNASLTD 299
++ T + L + ++ L L+L + +++D + LS + L L L N +TD
Sbjct: 684 LKMPSRHTTTDVGLKYISDMP-LVVLDLTDYIRITDEGVRHLSNMRSLNSLFLVNTKITD 742
Query: 300 VSLHQLSSLSKLTNLSIRDAVLTNSG---LGSF 329
++ + LS L L + ++N G LG F
Sbjct: 743 DAMTHIQGLSNLVELCLDHTEISNKGATVLGFF 775
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 29/210 (13%)
Query: 99 DCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIA 158
DC AL L+G+ L L + TD G+K++ + + +T +G+
Sbjct: 665 DCMN-GDEALQCLSGLK-LTHLKMPSRHTTTDVGLKYISDMPLVVLDLTDYIRITDEGVR 722
Query: 159 LLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN 218
LS++++L+ L L +TD + +Q L+ L L L +++SN+GA VL F +L L
Sbjct: 723 HLSNMRSLNSLFLVNTKITDDAMTHIQGLSNLVELCLDHTEISNKGATVLGFFNKLQVLG 782
Query: 219 LAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATL 278
LA T VT +L L L L +LNL T++ D L
Sbjct: 783 LASTRVTS-----------------------KLLKSHVLNKLVMLNKLNLRDTKIRDNGL 819
Query: 279 FPLSTFKELIHLSLRNASLTDVSLHQLSSL 308
L +L HL+L N T VS + + L
Sbjct: 820 DAL----KLPHLTLINLDRTQVSPNAIEHL 845
>gi|18413537|emb|CAD21866.1| hypothetical leucine-rich repeat protein 1 (LRRP1) [Trypanosoma
brucei]
Length = 1393
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 121/278 (43%), Gaps = 63/278 (22%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 176
L +L +S C +TDA + +S LE+L LS +T GI L L L +LDL G+PV
Sbjct: 250 LSKLSVSECNNITDA--TPISQLSALEELNLSNCHITK-GIGTLGMLLRLRILDLSGVPV 306
Query: 177 TDLVLR------SLQVL-----------------TKLEYLDLWGSQVSNRGAAVLKMFPR 213
D L+ SL+ L T +E L+L G + RG V+ P+
Sbjct: 307 EDNCLKDLCDCGSLERLNISYRIQLTDINPLSNATAIEELNLNGCRRITRGIGVVWALPK 366
Query: 214 LSFLNL----------------------------AWTGVTKLPNISSLECLNLSFIQQVG 245
L L++ + +T L +I +LE LN IQ+
Sbjct: 367 LRVLHMKDVHLSEPSLDSVGTGGPLVKVSLDNCAGFGDMTLLSSIVTLEELN---IQKCA 423
Query: 246 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS-LHQ 304
D++ + L L +L LN+++ +S + K L+ L++ S+T +S +
Sbjct: 424 ---DIISGVGCLGTLPYLRVLNIKEAHISSLDFTGIGASKSLLQLNME--SITGLSNVEA 478
Query: 305 LSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 342
L+++ L LS+ ++G+G LK+LDL G
Sbjct: 479 LANILTLEKLSLHGCTGIDAGIGCLGNLPQLKMLDLSG 516
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 124/312 (39%), Gaps = 67/312 (21%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+ LG YLR LN+ + ++S + L +L++ +++ ++ L +I TL
Sbjct: 429 VGCLGTLPYLRVLNIKE-AHISSLDFTGIGASKSLLQLNMESITGLSN--VEALANILTL 485
Query: 143 EKLWLSE-TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL---QVLTKLEYLDLWG- 197
EKL L TG+ A GI L +L L +LDL G + LRSL Q + L W
Sbjct: 486 EKLSLHGCTGIDA-GIGCLGNLPQLKMLDLSGTNTDNESLRSLCLSQTVVSLNLSHCWKM 544
Query: 198 ---SQVSNRGAAVLKMFPRLSFLNLAWTGVTKL---------------------PNISSL 233
S +S+ A +N W + KL N +L
Sbjct: 545 TNVSHISSLEALNELNLSNCFGINAGWEAIEKLQQLHVAILSNTHITDRDISHFSNCKNL 604
Query: 234 ECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQ----------------------- 270
L+LSF + +L +TAL N+ LE LNL+
Sbjct: 605 ITLDLSFCNK-------LLDVTALSNITTLEELNLDSCSNIRKGLSVLGELPRLCVLNIK 657
Query: 271 -TQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGS 328
Q+ D+ + L + LSL N DV+ LS+L L L++ SG+G+
Sbjct: 658 GVQLEDSVIVSLGNGNSFVRLSLENCKGFGDVA--PLSNLVTLEELNLHYCDKVTSGMGT 715
Query: 329 FKPPRSLKLLDL 340
L++LDL
Sbjct: 716 LGRLLQLRVLDL 727
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 124/282 (43%), Gaps = 57/282 (20%)
Query: 111 LTGMTCLKELDLSR--CVK---VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQN 165
L M LK L + + C++ + + +HL +I TLE+L +++T + I +S L N
Sbjct: 167 LVNMISLKRLQMLKRLCLRSNNIDNNDARHLFNIGTLEELAITDT-MQLTNIRGISRLTN 225
Query: 166 LSVLDLGGLPVTDLVLRSLQVLTK-----------------------LEYLDLWGSQVSN 202
L L+L + D +R + K LE L+L ++
Sbjct: 226 LKCLELNSTNIDDSCVRRICACVKLSKLSVSECNNITDATPISQLSALEELNLSNCHIT- 284
Query: 203 RGAAVLKMFPRLSFLNLAWTGV-----TKLPNISSLECLNLSFIQQVGAETDLVLSLTAL 257
+G L M RL L+L+ V L + SLE LN+S+ Q+ + + + + TA+
Sbjct: 285 KGIGTLGMLLRLRILDLSGVPVEDNCLKDLCDCGSLERLNISYRIQL-TDINPLSNATAI 343
Query: 258 QNLN------------------HLERLNLEQTQVSDATLFPLSTFKELIHLSLRN-ASLT 298
+ LN L L+++ +S+ +L + T L+ +SL N A
Sbjct: 344 EELNLNGCRRITRGIGVVWALPKLRVLHMKDVHLSEPSLDSVGTGGPLVKVSLDNCAGFG 403
Query: 299 DVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
D++L LSS+ L L+I+ SG+G L++L++
Sbjct: 404 DMTL--LSSIVTLEELNIQKCADIISGVGCLGTLPYLRVLNI 443
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 150/338 (44%), Gaps = 54/338 (15%)
Query: 79 DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLS 138
+ E + ++ + L +LN+A C+ +T + AL+ +T L+EL+L C + G++ L +
Sbjct: 805 NDENIRHVSECKSLNTLNLAFCKDITD--VTALSKITMLEELNLDCCHNIR-KGIETLGT 861
Query: 139 ISTLEKLWLSETGLTADGIA----LLSSLQNLSVLDL----GGLPVTDLVLRSLQVLTKL 190
+ L + E + DG A +L + ++L L+L G + V ++L + L
Sbjct: 862 LPKARILSMKECYM-GDGYAQQCSILGNSKSLVKLNLERSRGRISV-----KALSNVATL 915
Query: 191 EYLDLWGSQVSNRGAAVLKMF---PRLSFLNLAWTGVTK--LPNIS---SLECLNLSFIQ 242
E L L + R + F PRL LNL +T + NIS SL LNLS +
Sbjct: 916 EELVLDHA----RKVCCIPSFSCLPRLRVLNLKYTDINGDVTKNISESKSLRSLNLSHCK 971
Query: 243 QVGAETDLVLSLTALQ----NLNHLERLN----------------LEQTQVSDATLFPLS 282
V TD+ + + L N+N + L T+++ + LS
Sbjct: 972 WV---TDISVLSSLLTLEELNVNCCNGIRKGWESLGKLPLLRVAILSDTKITAKDIACLS 1028
Query: 283 TFKELIHLSL-RNASLTDVSL-HQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
+ K+L+ L R L+DV++ +++ SL +L S D + + LG+ R L ++
Sbjct: 1029 SCKKLVKLKFFRCKKLSDVTVVYKIQSLEELIVTSCSDGLKGLNALGTLPRLRFHHLRNV 1088
Query: 341 HGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGS 378
G + E + IEV EL+ I P I S
Sbjct: 1089 RGSDISVESIGTSKSLVRLHIEVGEELTDITPLSNITS 1126
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 117/275 (42%), Gaps = 38/275 (13%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
++ + + + LRSLN++ C+ VT ++ + ++ C G + L
Sbjct: 948 INGDVTKNISESKSLRSLNLSHCKWVTDISVLSSLLTLEELNVN---CCNGIRKGWESLG 1004
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD-LW 196
+ L LS+T +TA IA LSS + L L L + V+ K++ L+ L
Sbjct: 1005 KLPLLRVAILSDTKITAKDIACLSSCKKLVKLKFFRCKK----LSDVTVVYKIQSLEELI 1060
Query: 197 GSQVSN--RGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSL 254
+ S+ +G L PRL F +L + +IS ++ +G LV
Sbjct: 1061 VTSCSDGLKGLNALGTLPRLRFHHLRNV---RGSDIS---------VESIGTSKSLV--- 1105
Query: 255 TALQNLNHLERLNLE-QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 313
RL++E +++D T PLS L LSLR+ + L L +L +
Sbjct: 1106 ----------RLHIEVGEELTDIT--PLSNITSLEELSLRDYRKPPEGVGTLGKLPRLKS 1153
Query: 314 LSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 348
L + + +++S L RS+ L+L W LT+
Sbjct: 1154 LDLGLSRISDSTLYCICLSRSITSLNLDSSWKLTD 1188
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 90/228 (39%), Gaps = 49/228 (21%)
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV--------- 186
L +I++LE+L L + +G+ L L L LDLG ++D L + +
Sbjct: 1121 LSNITSLEELSLRDYRKPPEGVGTLGKLPRLKSLDLGLSRISDSTLYCICLSRSITSLNL 1180
Query: 187 --------------LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISS 232
LT LE L+L G G L PRL LNL +T VT
Sbjct: 1181 DSSWKLTDISHISNLTALEELNLGGCYYITSGWKALSELPRLRVLNLEFTRVT------- 1233
Query: 233 LECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL 292
+ G + +L LNLE ++DA+ L+ K L L +
Sbjct: 1234 ---------TRDGG--------YYISRCKYLVTLNLELCDMTDASC--LANIKTLEELHI 1274
Query: 293 RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
L +L +L L++ +++T+ L +PP +++ L+L
Sbjct: 1275 GGCDELTQGFSALFTLPQLRILNLICSLITDEDLREIQPPHTIEELNL 1322
>gi|290974856|ref|XP_002670160.1| predicted protein [Naegleria gruberi]
gi|284083716|gb|EFC37416.1| predicted protein [Naegleria gruberi]
Length = 376
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 134/280 (47%), Gaps = 30/280 (10%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+G + L L+ +C + + + + M L +L++ R ++ + G K++ + L +L
Sbjct: 55 IGLMKGLTVLSAENC--IGTEGVKHICKMNNLTKLNIER-NEIGEEGAKYISKMKQLTEL 111
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+ G+ +G+ +S L+NL++L++ + D +S+ L +L +L++ + +SN G+
Sbjct: 112 NVGWNGIGKEGVEFISELKNLTLLEIEACRICDEGAKSISELKQLTHLNISYNNISNLGS 171
Query: 206 AVLKMFPRLSFL-----NLAWTG---VTKLPNISSLE-------CLNLSFIQQVGAETDL 250
L +L+ L N++ G +++L ++ L+ C + +I G + L
Sbjct: 172 KYLTELKQLTVLTLCDCNISEEGCKYISELNQLTDLDISNNDIGCNGVEYIS--GMKQLL 229
Query: 251 VLSL-------TALQNLNHLER---LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 300
L + T LQ ++ +++ LN+ V D +S K+L L + + ++
Sbjct: 230 FLYIYGTNMYPTELQKISEMKQVTNLNISWNYVGDEGAKYISDMKQLTKLEVVRSDISTE 289
Query: 301 SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
+S L +LT+L+I + + G + L++LD+
Sbjct: 290 GAKHISELKQLTDLNIGENNIGGEGAIAISKMNQLRILDI 329
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 47/259 (18%), Positives = 111/259 (42%), Gaps = 27/259 (10%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N + E + ++ + L L + CR + +++ + L L++S +++ G
Sbjct: 114 GWNGIGKEGVEFISELKNLTLLEIEACR-ICDEGAKSISELKQLTHLNISY-NNISNLGS 171
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
K+L + L L L + ++ +G +S L L+ LD+ + + + + +L +L
Sbjct: 172 KYLTELKQLTVLTLCDCNISEEGCKYISELNQLTDLDISNNDIGCNGVEYISGMKQLLFL 231
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV--------TKLPNISSLECLNLSFIQQVG 245
++G+ + + +++ LN++W V + + ++ LE + S I G
Sbjct: 232 YIYGTNMYPTELQKISEMKQVTNLNISWNYVGDEGAKYISDMKQLTKLEVVR-SDISTEG 290
Query: 246 AE--------TDLVLS--------LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIH 289
A+ TDL + A+ +N L L++ + +S K+L H
Sbjct: 291 AKHISELKQLTDLNIGENNIGGEGAIAISKMNQLRILDISDNNIGGIGAEHVSQMKQLTH 350
Query: 290 LSLRNASLTDVSLHQLSSL 308
L + + + + +++++
Sbjct: 351 LDISHNCIGNYGAKRINTM 369
>gi|242064416|ref|XP_002453497.1| hypothetical protein SORBIDRAFT_04g006870 [Sorghum bicolor]
gi|241933328|gb|EES06473.1| hypothetical protein SORBIDRAFT_04g006870 [Sorghum bicolor]
Length = 655
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 144/300 (48%), Gaps = 41/300 (13%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMT-CLKELDLSRCVKVTDAGMKHLL-SIS 140
MA + LR ++V C VT AL ++ LK+L L +C V+DAG+K S
Sbjct: 352 MANAAGLQNLRCMSVTSCPGVTDLALASIAKFCPSLKQLCLRKCGHVSDAGLKAFTESAK 411
Query: 141 TLEKLWLSETG-LTADGI-----------ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLT 188
E L L E +T GI LS ++ + + D+G P + RSL+ LT
Sbjct: 412 VFENLQLEECNRVTLVGILAFLLNCSQKFRALSLVKCMGIKDIGSAPAQLPLCRSLRFLT 471
Query: 189 KLEYLDLWGSQVSNRGAAVLKMF-PRLSFLNLAWTG-VTK---LPNISSLEC----LNLS 239
D G ++ AV+ M P+L ++L+ G VT LP I S E ++LS
Sbjct: 472 ---IKDCPG--FTDASLAVVGMICPQLEQVDLSGLGEVTDNGLLPLIQSSEAGLIKVDLS 526
Query: 240 FIQQVGAETDLVLSLTALQNLNHLERLNLEQ-TQVSDATLFPLS-TFKELIHLSLRNASL 297
+ + TD+ +S + L++++LE ++++DA+LF +S + EL L L N +
Sbjct: 527 GCKNI---TDVAVSSLVKGHGKSLKKVSLEGCSKITDASLFTMSESCTELAELDLSNCMV 583
Query: 298 TDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKM 357
+D H ++ L+ +L +R VL+ SG S +S+ L G L E LQFC M
Sbjct: 584 SD---HGVAILASARHLKLR--VLSLSGC-SKVTQKSVPFLGNLGQSL--EGLNLQFCNM 635
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 86/180 (47%), Gaps = 19/180 (10%)
Query: 84 AYLGAFRYLRSLNVADCRRVTSSALWALTGMTC--LKELDLSRCVKVTDAGMKHLLSIST 141
A L R LR L + DC T ++L A+ GM C L+++DLS +VTD G+ L+ S
Sbjct: 459 AQLPLCRSLRFLTIKDCPGFTDASL-AVVGMICPQLEQVDLSGLGEVTDNGLLPLIQSSE 517
Query: 142 LEKLWLSETGLTADGIALLSSL-----QNLSVLDLGGL-PVTDLVLRSL-QVLTKLEYLD 194
+ + +G +SSL ++L + L G +TD L ++ + T+L LD
Sbjct: 518 AGLIKVDLSGCKNITDVAVSSLVKGHGKSLKKVSLEGCSKITDASLFTMSESCTELAELD 577
Query: 195 LWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNIS---------SLECLNLSFIQQVG 245
L VS+ G A+L L L+ +G +K+ S SLE LNL F +G
Sbjct: 578 LSNCMVSDHGVAILASARHLKLRVLSLSGCSKVTQKSVPFLGNLGQSLEGLNLQFCNMIG 637
>gi|296120888|ref|YP_003628666.1| hypothetical protein Plim_0620 [Planctomyces limnophilus DSM 3776]
gi|296013228|gb|ADG66467.1| hypothetical protein Plim_0620 [Planctomyces limnophilus DSM 3776]
Length = 219
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 65/109 (59%), Gaps = 2/109 (1%)
Query: 94 SLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLT 153
S +++D + VT L L G+ + L+L R K+TDAG+ H+ ++ L KL L +T +T
Sbjct: 80 SFHLSD-QPVTDEQLALLPGLPEVAILNL-RGTKITDAGLVHVGTLKNLLKLHLEKTAIT 137
Query: 154 ADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
G+A LS L+ L L+L G VT ++ L L KL+ L LW ++VS+
Sbjct: 138 DAGLAHLSGLEKLEYLNLYGTKVTGAGVKGLAKLPKLQRLYLWQTEVSD 186
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 254 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 313
L L L + LNL T+++DA L + T K L+ L L ++TD L LS L KL
Sbjct: 93 LALLPGLPEVAILNLRGTKITDAGLVHVGTLKNLLKLHLEKTAITDAGLAHLSGLEKLEY 152
Query: 314 LSIRDAVLTNSGL-GSFKPPR 333
L++ +T +G+ G K P+
Sbjct: 153 LNLYGTKVTGAGVKGLAKLPK 173
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 61/132 (46%), Gaps = 25/132 (18%)
Query: 147 LSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAA 206
LS+ +T + +ALL L +++L+L G +TD L + L L L L + +++ G A
Sbjct: 83 LSDQPVTDEQLALLPGLPEVAILNLRGTKITDAGLVHVGTLKNLLKLHLEKTAITDAGLA 142
Query: 207 VLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERL 266
L +L +LNL T VT GA + L L L+RL
Sbjct: 143 HLSGLEKLEYLNLYGTKVT-------------------GA------GVKGLAKLPKLQRL 177
Query: 267 NLEQTQVSDATL 278
L QT+VSDA L
Sbjct: 178 YLWQTEVSDADL 189
Score = 38.1 bits (87), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 2/112 (1%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
+ V E +A L + LN+ + +T + L + + L +L L + +TDAG+
Sbjct: 85 DQPVTDEQLALLPGLPEVAILNLRGTK-ITDAGLVHVGTLKNLLKLHLEKTA-ITDAGLA 142
Query: 135 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 186
HL + LE L L T +T G+ L+ L L L L V+D L+ LQV
Sbjct: 143 HLSGLEKLEYLNLYGTKVTGAGVKGLAKLPKLQRLYLWQTEVSDADLQELQV 194
>gi|398024920|ref|XP_003865621.1| hypothetical protein, conserved [Leishmania donovani]
gi|322503858|emb|CBZ38944.1| hypothetical protein, conserved [Leishmania donovani]
Length = 1208
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 115/240 (47%), Gaps = 14/240 (5%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
M ++G L L++ R++T + L +T L+ L+LS + VTD G L + +L
Sbjct: 543 MHHIGLCDKLVELHLQSLRQLTD--IGVLKDLTALRVLNLSDNL-VTDEGCSALHCMPSL 599
Query: 143 EKLWLSE----TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
++L L+ T L A A + L LD+ ++D + +Q T L YL+L G
Sbjct: 600 QRLNLASCRCITSLAAAFTASGRCMHRLLSLDVSHTNISDAGVLCVQECTDLRYLNLCGC 659
Query: 199 QVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL-NLSFIQQVGAETDLVLSLTAL 257
R + + KM L +LNL T VT L C NL F+ G + V SL
Sbjct: 660 SELRRLSWLQKM-SSLRWLNLGGTRVTDEETKRYLPCTRNLRFLSLSGCSS--VRSLFFA 716
Query: 258 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSI 316
L LE LNLE T V+D+ L L ++L +LSL + + DVS L +L L L+I
Sbjct: 717 VKLPQLEYLNLESTSVADSELACLCHCRKLRYLSLESCVDIRDVS--PLCALPALLELNI 774
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 33/167 (19%)
Query: 114 MTCLKELDLSRCVKVTD-AGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLG 172
C+ LDL+RC +V +G+++L + L +L L+++ + DG+ ++S+ + L VL L
Sbjct: 1014 FACVSCLDLTRCTEVQCLSGLENLYA---LRELTLTQSSVDNDGVRVVSACETLEVLRLT 1070
Query: 173 GL-PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNIS 231
V+D+ SL L KL L + +QV+N+G + L +LN A
Sbjct: 1071 ECRGVSDV--NSLGGLRKLRVLCVARTQVTNQGLEGIGQCLALQYLNCA----------- 1117
Query: 232 SLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATL 278
EC LS + AL +L HL L+LE+T V DA +
Sbjct: 1118 --ECRYLSDVN-------------ALSSLKHLIELHLERTDVVDAGI 1149
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 115/247 (46%), Gaps = 37/247 (14%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSI-STLEKLWLSETGLTADGIALLS 161
VT + L +LTG T L++L L C ++TD + L ++ TLE+L + T L+ + +
Sbjct: 490 VTDTDLLSLTGCTQLRQLVLDECRQITD--LSFLANLRGTLERLLMPRTLLSNANMHHIG 547
Query: 162 SLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA 220
L L L L +TD+ + L+ LT L L+L + V++ G + L P L LNLA
Sbjct: 548 LCDKLVELHLQSLRQLTDIGV--LKDLTALRVLNLSDNLVTDEGCSALHCMPSLQRLNLA 605
Query: 221 WTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNH-LERLNLEQTQVSDATLF 279
S C+ T L + TA H L L++ T +SDA +
Sbjct: 606 -----------SCRCI-----------TSLAAAFTASGRCMHRLLSLDVSHTNISDAGVL 643
Query: 280 PLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN---LSIRDAVLTNSGLGSFKP-PRSL 335
+ +L +L+L S L +LS L K+++ L++ +T+ + P R+L
Sbjct: 644 CVQECTDLRYLNLCGCS----ELRRLSWLQKMSSLRWLNLGGTRVTDEETKRYLPCTRNL 699
Query: 336 KLLDLHG 342
+ L L G
Sbjct: 700 RFLSLSG 706
>gi|290994542|ref|XP_002679891.1| predicted protein [Naegleria gruberi]
gi|284093509|gb|EFC47147.1| predicted protein [Naegleria gruberi]
Length = 359
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 117/256 (45%), Gaps = 17/256 (6%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
L LN++ + + ++ MT L +LD+S + + G ++ ++ L L +SE
Sbjct: 89 LTKLNISR-NNINAGGTKSICEMTQLTDLDISNNF-IGNEGASYIGGMTKLTNLSISENH 146
Query: 152 LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF 211
+ +GI L + NL L++ + D R + + +L L++ +++ + G+ +
Sbjct: 147 IGVEGIKSLFHINNLICLNISSCKIGDEGARLISEMKQLTTLEISHNEIGSYGSKAISEM 206
Query: 212 PRLSFLNLAWT-----GVTKLPNISSLECLNLSF--IQQVGAETDLVLSLTALQNLNHLE 264
+L+ LN+ + G + + L L++S I GA+ +L L+ L
Sbjct: 207 YQLTKLNIRYNVLGNEGAHYIGIMEQLTELDISHNRISGEGAK--------SLSKLSQLT 258
Query: 265 RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS 324
+L++ ++ D + +S +L++L + + D+ + +SKLT L I D + N
Sbjct: 259 KLDINTNEIGDEGMKSISKLDQLLYLDIGENEIGDIGTGLIIGMSKLTELLINDNRVGND 318
Query: 325 GLGSFKPPRSLKLLDL 340
G S L LD+
Sbjct: 319 GAESLAQMHQLTQLDI 334
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 105/230 (45%), Gaps = 12/230 (5%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 176
L +LD+S + V G + +++ L L +S L G ++ + L+ L++ +
Sbjct: 41 LTKLDVSSWL-VNAEGANMISNLAHLADLDISNNQLLERGSKIIREMTQLTKLNISRNNI 99
Query: 177 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNIS 231
+S+ +T+L LD+ + + N GA+ + +L+ L+++ G+ L +I+
Sbjct: 100 NAGGTKSICEMTQLTDLDISNNFIGNEGASYIGGMTKLTNLSISENHIGVEGIKSLFHIN 159
Query: 232 SLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 291
+L CLN+S ++G E ++S + L L + ++ +S +L L+
Sbjct: 160 NLICLNISSC-KIGDEGARLIS-----EMKQLTTLEISHNEIGSYGSKAISEMYQLTKLN 213
Query: 292 LRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 341
+R L + H + + +LT L I ++ G S L LD++
Sbjct: 214 IRYNVLGNEGAHYIGIMEQLTELDISHNRISGEGAKSLSKLSQLTKLDIN 263
>gi|87309591|ref|ZP_01091725.1| probable G protein-coupled receptor [Blastopirellula marina DSM
3645]
gi|87287355|gb|EAQ79255.1| probable G protein-coupled receptor [Blastopirellula marina DSM
3645]
Length = 328
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 120/266 (45%), Gaps = 18/266 (6%)
Query: 58 SLLEV-FKHNAEAIELRGENS-VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMT 115
+++EV + +ELR ++ + ++L + L+ LN+ + VT +L + +
Sbjct: 58 AMVEVEYDDQGAVVELRANSARMTDNAASHLVMLQSLQRLNL-NQSGVTDKSLEIMGALP 116
Query: 116 CLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP 175
L+ L L R VT AG+ L S LE+L L+E + D + + L L++L L P
Sbjct: 117 ELRSLYLERTA-VTSAGVAALASCEKLEELMLTECAIQDDALETIGQLPALTLLSLSETP 175
Query: 176 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK--------L 227
+TD + LQ L L+ L L + V+ G A+LK L ++L+ + +
Sbjct: 176 ITDAGMFHLQSLPHLKTLYLRDTAVTGEGFAMLKSSTDLRLIDLSDNSINRSTIETLRSF 235
Query: 228 PNISSLECLNLSFIQQVGAETDLVLSLTALQNLN-HLERLNLEQTQVSDATLFPLSTFKE 286
PN+ L S ++ E + L N HL L + + ++D +L PL E
Sbjct: 236 PNLERLYLGRTSLTDELLPEF-----IDTLIRFNPHLRGLAIMEVPITDNSLTPLKRLAE 290
Query: 287 LIHLSLRNASLTDVSLHQLSSLSKLT 312
L L++ + T V+ L K T
Sbjct: 291 LPDLAVVDFRETGVTRGAFQELIKAT 316
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 123/257 (47%), Gaps = 27/257 (10%)
Query: 87 GAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLW 146
GA LR A+ R+T +A L + L+ L+L++ VTD ++ + ++ L L+
Sbjct: 68 GAVVELR----ANSARMTDNAASHLVMLQSLQRLNLNQS-GVTDKSLEIMGALPELRSLY 122
Query: 147 LSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAA 206
L T +T+ G+A L+S + L L L + D L ++ L L L L + +++ G
Sbjct: 123 LERTAVTSAGVAALASCEKLEELMLTECAIQDDALETIGQLPALTLLSLSETPITDAGMF 182
Query: 207 VLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLS--FIQQVGAETDLVLSLTALQN 259
L+ P L L L T VT L + + L ++LS I + ET L++
Sbjct: 183 HLQSLPHLKTLYLRDTAVTGEGFAMLKSSTDLRLIDLSDNSINRSTIET--------LRS 234
Query: 260 LNHLERLNLEQTQVSDATLFP-----LSTFK-ELIHLSLRNASLTDVSLHQLSSLSKLTN 313
+LERL L +T ++D L P L F L L++ +TD SL L L++L +
Sbjct: 235 FPNLERLYLGRTSLTDE-LLPEFIDTLIRFNPHLRGLAIMEVPITDNSLTPLKRLAELPD 293
Query: 314 LSIRDAVLTNSGLGSFK 330
L++ D T G+F+
Sbjct: 294 LAVVDFRETGVTRGAFQ 310
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 7/146 (4%)
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLN-LSFIQQVGAETDLVLS--L 254
+++++ A+ L M L LNL +GVT SLE + L ++ + E V S +
Sbjct: 78 ARMTDNAASHLVMLQSLQRLNLNQSGVTD----KSLEIMGALPELRSLYLERTAVTSAGV 133
Query: 255 TALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 314
AL + LE L L + + D L + L LSL +TD + L SL L L
Sbjct: 134 AALASCEKLEELMLTECAIQDDALETIGQLPALTLLSLSETPITDAGMFHLQSLPHLKTL 193
Query: 315 SIRDAVLTNSGLGSFKPPRSLKLLDL 340
+RD +T G K L+L+DL
Sbjct: 194 YLRDTAVTGEGFAMLKSSTDLRLIDL 219
>gi|351706287|gb|EHB09206.1| F-box/LRR-repeat protein 2 [Heterocephalus glaber]
Length = 412
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 159/340 (46%), Gaps = 23/340 (6%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC-LKELDLSRCVK 127
+ LRG V D+ + R + LN+ C ++T S ++L+ LK LDL+ CV
Sbjct: 73 LSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVS 132
Query: 128 VTDAGMKHLL-SISTLEKLWLSETG-LTADGI-ALLSSLQNLSVLDLGGLP-VTDLVLRS 183
VT++ +K + LE L LS +T DGI AL+ + L L L G + D L+
Sbjct: 133 VTNSSLKCISEGCRNLEYLNLSWCDQITKDGIEALVRGCRCLKALLLRGCTQLEDEALKH 192
Query: 184 LQ-VLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNIS----SLECLN 237
+Q +L L+L S++++ G + R L+ +G + L + S L C
Sbjct: 193 MQNYCHELVSLNLQSCSRITDEGVVQICRGCR-QLQALSLSGCSNLTDASLAALGLNCPR 251
Query: 238 LSFIQQVGAE--TDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTF-KELIHLSLR 293
+ ++ TD +L A +N + LE+++LE+ ++D+TL LS +L LSL
Sbjct: 252 MQILEAARCTHLTDAGFTLLA-RNCHDLEKMDLEECILITDSTLIQLSIHCPKLQALSLS 310
Query: 294 NASL-TDVSLHQLSSLS----KLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 348
+ L TD + LS+ + +L L + + ++T+ L + R L+ L+L+ +T
Sbjct: 311 HCELITDDGILHLSNSTCGHKRLRVLELDNCLITDVALEHLENCRGLERLELYDCQQVTR 370
Query: 349 DAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSL 388
I + P ++V + + P + +G R +
Sbjct: 371 AGIKRMRAQLPHVKVHAYFAPVIPPTAVAGSGQRLCRCCV 410
>gi|85679226|gb|ABC72029.1| InlA [Listeria monocytogenes]
Length = 791
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 121/226 (53%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 156 IDSLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERL 211
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 212 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 266
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++ T+ + +++ L L L
Sbjct: 267 -TLASLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGTNQISNISPLAGLTALTN 320
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 321 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 362
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 87/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ SL+ LT L L+L + +S+ A + L +LS
Sbjct: 134 ITPLANLSNLTGLTLFNNQITDI--DSLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 191
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 192 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 242
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 243 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 286
>gi|290980071|ref|XP_002672756.1| predicted protein [Naegleria gruberi]
gi|284086335|gb|EFC40012.1| predicted protein [Naegleria gruberi]
Length = 385
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 109/248 (43%), Gaps = 13/248 (5%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + E + + L SL++ D ++ ++GM L LD++R ++ G K
Sbjct: 52 NQIGVEGAKLISGMKSLISLSIGD-NQIGVEGAKLISGMKHLTSLDINRN-QIGVEGAKS 109
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ + L L + + A+G +S ++ L+ LD+GG + + + + +L LD+
Sbjct: 110 ISRMKQLTSLNIYYNQIGAEGAKSISGMKQLTSLDIGGNQIGVEESKYISEMKQLTSLDI 169
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSFIQQVGAETDL 250
+ +Q+ GA + +L+ LN+ + G + + L LN+ ++G E
Sbjct: 170 YNNQIGVEGAKSISGMKQLTSLNIGFNRIGVEGSKLISEMKQLTSLNIGS-NEIGVEGSK 228
Query: 251 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 310
+ + HL LN+ ++ D +S K+L L + + +S + +
Sbjct: 229 FIP-----EMKHLTSLNIYYNEIGDEGSKYISEMKQLTSLDIYYNEIGVEGAKYISEMKQ 283
Query: 311 LTNLSIRD 318
LT+L I D
Sbjct: 284 LTSLGISD 291
>gi|430746594|ref|YP_007205723.1| hypothetical protein Sinac_5912 [Singulisphaera acidiphila DSM
18658]
gi|430018314|gb|AGA30028.1| hypothetical protein Sinac_5912 [Singulisphaera acidiphila DSM
18658]
Length = 170
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 66/125 (52%), Gaps = 4/125 (3%)
Query: 102 RVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLS 161
RV + + L + ELDL K+TDAG+K L + +L L L TG+T G+A L+
Sbjct: 32 RVGDAGMAQLASHPGIAELDL-HGTKITDAGLKPLKGMKSLVHLSLRATGITDAGLAHLA 90
Query: 162 SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW 221
+ L LDLG ++D ++ L L+ LD+ + V++R ++ F RL +N
Sbjct: 91 GMDRLERLDLGYTKISDA---GIEHLKGLKGLDIVETNVTDRSIPIIGGFERLEAINPRG 147
Query: 222 TGVTK 226
+ +T+
Sbjct: 148 SKITE 152
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 72/144 (50%), Gaps = 7/144 (4%)
Query: 75 ENS-VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
EN+ V MA L + + L++ + +T + L L GM L L L R +TDAG+
Sbjct: 29 ENTRVGDAGMAQLASHPGIAELDLHGTK-ITDAGLKPLKGMKSLVHLSL-RATGITDAGL 86
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
HL + LE+L L T ++ GI L L+ L +++ VTD + + +LE +
Sbjct: 87 AHLAGMDRLERLDLGYTKISDAGIEHLKGLKGLDIVETN---VTDRSIPIIGGFERLEAI 143
Query: 194 DLWGSQVSNRGAAVL-KMFPRLSF 216
+ GS+++ G L KM P+L
Sbjct: 144 NPRGSKITEAGEEQLRKMLPKLDI 167
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 60/123 (48%), Gaps = 20/123 (16%)
Query: 263 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 322
+ L+L T+++DA L PL K L+HLSLR +TD L L+ + +L L + ++
Sbjct: 47 IAELDLHGTKITDAGLKPLKGMKSLVHLSLRATGITDAGLAHLAGMDRLERLDLGYTKIS 106
Query: 323 NSGLGSFKPPRSLKLLDLH---------GGW-----------LLTEDAILQFCKMHPRIE 362
++G+ K + L +++ + GG+ +TE Q KM P+++
Sbjct: 107 DAGIEHLKGLKGLDIVETNVTDRSIPIIGGFERLEAINPRGSKITEAGEEQLRKMLPKLD 166
Query: 363 VWH 365
+ H
Sbjct: 167 IDH 169
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 79/172 (45%), Gaps = 28/172 (16%)
Query: 137 LSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLW 196
LS L++L + T + G+A L+S ++ LDL G +TD L+ L+ + L +L L
Sbjct: 18 LSAVVLKRLAIENTRVGDAGMAQLASHPGIAELDLHGTKITDAGLKPLKGMKSLVHLSLR 77
Query: 197 GSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTA 256
+ +++ G A L RL L+L +T ++
Sbjct: 78 ATGITDAGLAHLAGMDRLERLDLGYTKISD----------------------------AG 109
Query: 257 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 308
+++L L+ L++ +T V+D ++ + F+ L ++ R + +T+ QL +
Sbjct: 110 IEHLKGLKGLDIVETNVTDRSIPIIGGFERLEAINPRGSKITEAGEEQLRKM 161
>gi|290982059|ref|XP_002673748.1| predicted protein [Naegleria gruberi]
gi|284087334|gb|EFC41004.1| predicted protein [Naegleria gruberi]
Length = 370
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 130/309 (42%), Gaps = 32/309 (10%)
Query: 55 IFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGM 114
+ S+ E+ K N E N++D + YLG+ + L LNV+ C L L +
Sbjct: 26 VLDSMKELKKLNLEY------NNIDPNGIKYLGSLKQLTDLNVSCC--YIGLNLSHLILL 77
Query: 115 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 174
L L+++ + G K++ + L KL + + +G +S L+ L+ L++
Sbjct: 78 KALTHLNITSN-NIRAEGAKYIGEMKQLTKLSIGSNDIGPEGAKYISGLEQLTYLNIRSN 136
Query: 175 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV--------TK 226
+ + + + +L YL++ G+ + + GA + +LS L++ + + ++
Sbjct: 137 DIKKDGAKHISEMKQLTYLNVVGNHICDGGARFISEMKQLSNLSVGYNDIGEEGAKYISE 196
Query: 227 LPNISSLECLNLS-------FIQQVGAETDL--------VLSLTALQNLNHLERLNLEQT 271
L N+S L+ S FI ++ TDL V + +LN L L++
Sbjct: 197 LMNVSILDIGGNSINEKGAKFIGEMKQLTDLRIYCCNIGVEGTQYISSLNQLTHLSISTN 256
Query: 272 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP 331
+ D + K+L LS+R + + L L NL I + ++G
Sbjct: 257 NIGDEGAKYIGQMKQLTDLSIRENKIGIEGAKSIGQLKNLLNLYISGNEIGDNGAQFISE 316
Query: 332 PRSLKLLDL 340
L +LD+
Sbjct: 317 MNQLTILDI 325
>gi|219821291|gb|ACL37772.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L KVTD +K L +++TLE+L +S
Sbjct: 103 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--KVTD--LKPLANLTTLERLDISS 158
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 159 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 212
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 213 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 267
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 268 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 305
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 77 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 134
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 135 FGNKV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 186 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 229
>gi|440717669|ref|ZP_20898151.1| hypothetical protein RBSWK_05211 [Rhodopirellula baltica SWK14]
gi|436437289|gb|ELP30945.1| hypothetical protein RBSWK_05211 [Rhodopirellula baltica SWK14]
Length = 442
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 108/238 (45%), Gaps = 17/238 (7%)
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
+ DAGM++L S++ L++L L++T +T + + + +L L L VTD L L L
Sbjct: 107 IDDAGMENLKSLANLKRLTLADTAITDQTLKTVGEMTSLDALFLRRTGVTDEGLELLTGL 166
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK--------LPNISSLECLNLS 239
+KL +DL + + + G L L + L + VT LP L+ +N +
Sbjct: 167 SKLRAIDLRNTNIGDAGMDSLAKIKTLIDVKLEKSKVTDEGLVKLAPLP----LKSINFN 222
Query: 240 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 299
+ + T +L T LE L + ++++DA++ L +L L +R +T
Sbjct: 223 YCTTINGPTMKMLGQTP-----TLENLQGDYSKINDASMAELKGLSKLKRLRIRGCDVTG 277
Query: 300 VSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKM 357
+ ++ L +RD+ + + GL ++ +D+ L + + I Q K+
Sbjct: 278 EGIQHIAGNKALARFELRDSSVDDDGLKVISQLPAVTHVDISECRLASPEGIAQLGKL 335
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 112/254 (44%), Gaps = 15/254 (5%)
Query: 69 AIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV 128
AI+LR N DA M L + L + + + +VT L L + LK ++ + C +
Sbjct: 171 AIDLRNTNIGDA-GMDSLAKIKTLIDVKL-EKSKVTDEGLVKLAPLP-LKSINFNYCTTI 227
Query: 129 TDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLT 188
MK L TLE L + + +A L L L L + G VT ++ +
Sbjct: 228 NGPTMKMLGQTPTLENLQGDYSKINDASMAELKGLSKLKRLRIRGCDVTGEGIQHIAGNK 287
Query: 189 KLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSFIQ 242
L +L S V + G V+ P ++ ++++ G+ +L + L L L +
Sbjct: 288 ALARFELRDSSVDDDGLKVISQLPAVTHVDISECRLASPEGIAQLGKLIGLTYLGL-WET 346
Query: 243 QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 302
+ ET L +L +LE LNL+ T V+D +L L +L L++ L D S
Sbjct: 347 KTNDET-----LAGFGDLVNLEELNLKSTAVTDESLPVLMKMTKLKTLNVAGTQLGDDSF 401
Query: 303 HQLSSLSKLTNLSI 316
+L+ L L ++++
Sbjct: 402 LELAKLPNLKSMNV 415
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 131/310 (42%), Gaps = 52/310 (16%)
Query: 92 LRSLNVADCRR--VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ SL+ RR VT L LTG++ L+ +DL R + DAGM L I TL + L +
Sbjct: 142 MTSLDALFLRRTGVTDEGLELLTGLSKLRAIDL-RNTNIGDAGMDSLAKIKTLIDVKLEK 200
Query: 150 TGLTADGIALL-------------SSLQNLSVLDLGGLP-----------VTDLVLRSLQ 185
+ +T +G+ L +++ ++ LG P + D + L+
Sbjct: 201 SKVTDEGLVKLAPLPLKSINFNYCTTINGPTMKMLGQTPTLENLQGDYSKINDASMAELK 260
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVG 245
L+KL+ L + G V+ G + L+ L SS++ L I Q+
Sbjct: 261 GLSKLKRLRIRGCDVTGEGIQHIAGNKALARFELRD---------SSVDDDGLKVISQLP 311
Query: 246 AETDLVLS---------LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 296
A T + +S + L L L L L +T+ +D TL L L+L++ +
Sbjct: 312 AVTHVDISECRLASPEGIAQLGKLIGLTYLGLWETKTNDETLAGFGDLVNLEELNLKSTA 371
Query: 297 LTDVSLHQLSSLSKLTNLSIRDAVLTNSG---LGSFKPPRSLKLLDLHGGWLLTEDAILQ 353
+TD SL L ++KL L++ L + L +S+ + + G+ D I
Sbjct: 372 VTDESLPVLMKMTKLKTLNVAGTQLGDDSFLELAKLPNLKSMNVANTSIGF----DVIDT 427
Query: 354 FCKMHPRIEV 363
+ HP ++V
Sbjct: 428 LAENHPDLQV 437
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 94/222 (42%), Gaps = 28/222 (12%)
Query: 77 SVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHL 136
+++ M LG L +L D ++ +++ L G++ LK L + C VT G++H+
Sbjct: 226 TINGPTMKMLGQTPTLENLQ-GDYSKINDASMAELKGLSKLKRLRIRGC-DVTGEGIQHI 283
Query: 137 LSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV-TDLVLRSLQVLTKLEYLDL 195
L + L ++ + DG+ ++S L ++ +D+ + + + L L L YL L
Sbjct: 284 AGNKALARFELRDSSVDDDGLKVISQLPAVTHVDISECRLASPEGIAQLGKLIGLTYLGL 343
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLT 255
W ++ ++ A L LNL T VT SL
Sbjct: 344 WETKTNDETLAGFGDLVNLEELNLKSTAVTDE-------------------------SLP 378
Query: 256 ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 297
L + L+ LN+ TQ+ D + L+ L +++ N S+
Sbjct: 379 VLMKMTKLKTLNVAGTQLGDDSFLELAKLPNLKSMNVANTSI 420
>gi|397646482|gb|EJK77289.1| hypothetical protein THAOC_00890 [Thalassiosira oceanica]
Length = 702
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 141/313 (45%), Gaps = 56/313 (17%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS----------- 140
L SLNV CR +T +L A++G+ L+ LDLS+C +TD G+ L +
Sbjct: 334 LTSLNVGGCRCLTDRSLEAMSGLLDLRRLDLSQCDLITDDGLIFLGELDLLEELSLGNKS 393
Query: 141 ------------TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVL-RSLQVL 187
L+ L L+ +T DG+ L LQ+L LD+ G ++ L SL+ L
Sbjct: 394 CGMAIQQRNRSIALKTLRLARCAITNDGLDYLEQLQSLEDLDINGCSLSSTALGESLEKL 453
Query: 188 TK---------------LEYLDLWGSQVSNRGAAVLKMFPRLS-----FLNLAWTGVTKL 227
T LE L+L +Q+S+ + + L + N++ G+ L
Sbjct: 454 TNLNSLDASHCPGILPGLEVLNLADTQISDNAMSKVAKLAGLRSLSLFYCNVSSRGLRHL 513
Query: 228 PNISSLECLNLSFIQQVGAE------TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPL 281
++ L+ LNL + +G E TDL S A + L L L V D +
Sbjct: 514 ASLEKLDSLNLDS-RDIGDEGRPNRVTDLGCSYIA--KIKTLTTLQLAGGGVGDLGCAHI 570
Query: 282 STFKELIHLSL-RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
+T L L+L +N S+T+ L++LS L L++ + +T++ L F L+ L L
Sbjct: 571 ATIDALESLNLSQNESITNRGAASLAALSNLRALNLSNTRVTSNALKFFHGLSKLQSLAL 630
Query: 341 HGGWLLTEDAILQ 353
+G + ED+ ++
Sbjct: 631 YG--CIMEDSPIE 641
>gi|395738816|ref|XP_003777156.1| PREDICTED: F-box/LRR-repeat protein 13 [Pongo abelii]
Length = 690
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 132/281 (46%), Gaps = 21/281 (7%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLK--ELDLSRCVKVTDAGMKHLL-SISTLEK 144
F L++L++A CRR T L L G C K LDLS C +++ G +++ S + +
Sbjct: 295 FHNLQNLSLAYCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGVMH 354
Query: 145 LWLSETGLTADGI--ALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQVS 201
L +++ D AL+ ++ L G P +TD ++L KL + G++
Sbjct: 355 LTINDMPTLTDNCVKALVEKCSRITSLVFTGAPHITDCTFKALST-CKLRKIRFEGNKRV 413
Query: 202 NRGA--AVLKMFPRLSFLNLA-WTGVT-----KLPNISSLECLNLSFIQQVGAETDLVLS 253
+ +V K +P LS + +A G+T L + L LNL+ ++G + L
Sbjct: 414 TDASFKSVDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIG-DMGLKQF 472
Query: 254 LTALQNLNHLERLNLEQ-TQVSDATLFPLST-FKELIHLSLRNAS-LTDVSLHQLSSLSK 310
L ++ + LNL Q+SDA++ LS L +LSLRN LT + + ++
Sbjct: 473 LDGPASIK-IRELNLSNCVQLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNIFS 531
Query: 311 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 351
L ++ + ++N GL + LK L + + +T+D I
Sbjct: 532 LVSIDLSGTDISNEGLNVLSRHKKLKELSVSECYRITDDGI 572
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 9/159 (5%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV 128
I G V DA + + + L + +ADC+ +T S+L +L+ + L L+L+ CV++
Sbjct: 405 IRFEGNKRVTDASFKSVDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRI 464
Query: 129 TDAGMKHLL----SISTLEKLWLSETGLTADG--IALLSSLQNLSVLDLGGLP-VTDLVL 181
D G+K L SI + +L LS +D + L NL+ L L +T +
Sbjct: 465 GDMGLKQFLDGPASIK-IRELNLSNCVQLSDASVMKLSERCPNLNYLSLRNCEHLTAQGI 523
Query: 182 RSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA 220
+ + L +DL G+ +SN G VL +L L+++
Sbjct: 524 GYIVNIFSLVSIDLSGTDISNEGLNVLSRHKKLKELSVS 562
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 118/253 (46%), Gaps = 42/253 (16%)
Query: 117 LKELDLSRCVKVTDAGMKHLL-SISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 171
L+EL++S C TD M+H+ + L LS T +T + LL +LQNLS+
Sbjct: 247 LQELNVSDCPTFTDESMRHISEGCPGVLYLNLSNTTITNRTMRLLPRHFHNLQNLSLAYC 306
Query: 172 GGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWTGVTKL 227
TD L+ L + KL YLDL G +Q+S +G ++ + TGV L
Sbjct: 307 RRF--TDKGLQYLNLGNGCHKLIYLDLSGCTQISVQG---------FRYIANSCTGVMHL 355
Query: 228 -----PNISSLECLNLSFIQQVGAETDLVL---------SLTALQNLNHLERLNLE-QTQ 272
P ++ C+ + +++ T LV + AL L ++ E +
Sbjct: 356 TINDMPTLTD-NCVK-ALVEKCSRITSLVFTGAPHITDCTFKALSTCK-LRKIRFEGNKR 412
Query: 273 VSDATLFPL-STFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSF 329
V+DA+ + + L H+ + + +TD SL LS L +LT L++ + V + + GL F
Sbjct: 413 VTDASFKSVDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGLKQF 472
Query: 330 -KPPRSLKLLDLH 341
P S+K+ +L+
Sbjct: 473 LDGPASIKIRELN 485
>gi|119603704|gb|EAW83298.1| F-box and leucine-rich repeat protein 13, isoform CRA_a [Homo
sapiens]
Length = 735
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 134/286 (46%), Gaps = 21/286 (7%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLK--ELDLSRCVKVTDAGMKHLL-SISTLEK 144
F L++L++A CRR T L L G C K LDLS C +++ G +++ S + +
Sbjct: 295 FHNLQNLSLAYCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGIMH 354
Query: 145 LWLSETGLTADGIAL--LSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQ-V 200
L +++ D + ++ L G P ++D R+L KL + G++ V
Sbjct: 355 LTINDMPTLTDNCVKVGIEKCSRITSLVFTGAPHISDCTFRALSA-CKLRKIRFEGNKRV 413
Query: 201 SNRGAAVL-KMFPRLSFLNLA-WTGVT-----KLPNISSLECLNLSFIQQVGAETDLVLS 253
++ + K +P LS + +A G+T L + L LNL+ ++G + L
Sbjct: 414 TDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIG-DMGLKQF 472
Query: 254 LTALQNLNHLERLNLEQ-TQVSDATLFPLST-FKELIHLSLRNAS-LTDVSLHQLSSLSK 310
L ++ + LNL ++SDA++ LS L +LSLRN LT + + ++
Sbjct: 473 LDGPASM-RIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNIFS 531
Query: 311 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 356
L ++ + ++N GL + LK L + + +T+D I FCK
Sbjct: 532 LVSIDLSGTDISNEGLNVLSRHKKLKELSVSECYRITDDGIQAFCK 577
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 110/236 (46%), Gaps = 19/236 (8%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV 128
I G V DA + + L + +ADC+ +T S+L +L+ + L L+L+ CV++
Sbjct: 405 IRFEGNKRVTDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRI 464
Query: 129 TDAGMKHLLSIST---LEKLWLSETGLTADG--IALLSSLQNLSVLDLGGLP-VTDLVLR 182
D G+K L + +L LS +D + L NL+ L L +T +
Sbjct: 465 GDMGLKQFLDGPASMRIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIG 524
Query: 183 SLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT------GVTKLPNIS-SLEC 235
+ + L +DL G+ +SN G VL +L L+++ G+ S LE
Sbjct: 525 YIVNIFSLVSIDLSGTDISNEGLNVLSRHKKLKELSVSECYRITDDGIQAFCKSSLILEH 584
Query: 236 LNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHL 290
L++S+ Q+ +D+++ A+ +N L L++ +++D+ + LS +H+
Sbjct: 585 LDVSYCSQL---SDMIIKALAIYCIN-LTSLSIAGCPKITDSAMEMLSAKCHYLHI 636
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 90/183 (49%), Gaps = 21/183 (11%)
Query: 69 AIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMT-CLKELDLSRCVK 127
+I+L G + + E + L + L+ L+V++C R+T + A + L+ LD+S C +
Sbjct: 534 SIDLSGTD-ISNEGLNVLSRHKKLKELSVSECYRITDDGIQAFCKSSLILEHLDVSYCSQ 592
Query: 128 VTDAGMKHLLSISTLEKLWLSETG---LTADGIALLSS-LQNLSVLDLGG-LPVTDLVLR 182
++D +K L+I + LS G +T + +LS+ L +LD+ G + +TD +L
Sbjct: 593 LSDMIIK-ALAIYCINLTSLSIAGCPKITDSAMEMLSAKCHYLHILDISGCVLLTDQILE 651
Query: 183 SLQV------LTKLEYLDLWGSQVSNRGAAVLKMF-------PRLSFLNLAWTGVTKLPN 229
LQ+ + K++Y + + R ++ ++ PR + VT+L N
Sbjct: 652 DLQIGCKQLRILKMQYCTNISKKAAQRMSSKVQQQEYNTNDPPRWFGYDREGNPVTELDN 711
Query: 230 ISS 232
I+S
Sbjct: 712 ITS 714
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 120/256 (46%), Gaps = 48/256 (18%)
Query: 117 LKELDLSRCVKVTDAGMKHLL-SISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 171
L+EL++S C TD M+H+ + L LS T +T + LL +LQNLS+
Sbjct: 247 LQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQNLSLAYC 306
Query: 172 GGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWTGVTKL 227
TD L+ L + KL YLDL G +Q+S +G ++ + TG+ L
Sbjct: 307 RRF--TDKGLQYLNLGNGCHKLIYLDLSGCTQISVQG---------FRYIANSCTGIMHL 355
Query: 228 -----PNISSLECLNLSFIQQVGAETDLVLS------------LTALQNLNHLERLNLE- 269
P ++ C+ + I++ T LV + L+A + L ++ E
Sbjct: 356 TINDMPTLTD-NCVKVG-IEKCSRITSLVFTGAPHISDCTFRALSACK----LRKIRFEG 409
Query: 270 QTQVSDATL-FPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGL 326
+V+DA+ F + L H+ + + +TD SL LS L +LT L++ + V + + GL
Sbjct: 410 NKRVTDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGL 469
Query: 327 GSF-KPPRSLKLLDLH 341
F P S+++ +L+
Sbjct: 470 KQFLDGPASMRIRELN 485
>gi|290975915|ref|XP_002670687.1| predicted protein [Naegleria gruberi]
gi|284084248|gb|EFC37943.1| predicted protein [Naegleria gruberi]
Length = 402
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 106/232 (45%), Gaps = 19/232 (8%)
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
V + G+ L+S +L L++S + DG +S+L+ L++L++ + + + + L
Sbjct: 117 VFNCGVFDLMS-KSLTTLYISRNNIENDGAKHISALKQLTLLNISSNNIEEEGAKYIGKL 175
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV--------TKLPNISSLECLNLS 239
KL YLD+ + + + GA + +L+ L ++ + KL N++ LE +
Sbjct: 176 EKLTYLDISKNDIRSNGALYISELKQLTSLVISSNNIDEEGAAHLIKLTNLTELETVRNE 235
Query: 240 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 299
F GAE + + L LN+ + D +S K+L L++ + +TD
Sbjct: 236 F----GAE-----GAKHISEMKQLINLNINDNFIGDEGAKYISEMKQLTILNIGSNEITD 286
Query: 300 -VSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 350
V+ L++LT L I D + + ++L LLD+ G + E A
Sbjct: 287 RVNFENFGQLNQLTELYIEDNSIQTNACKYISQLQNLNLLDISGNNVDAEGA 338
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 69/151 (45%), Gaps = 3/151 (1%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTD-AGMK 134
N AE ++ + L +LN+ D + ++ M L L++ ++TD +
Sbjct: 234 NEFGAEGAKHISEMKQLINLNIND-NFIGDEGAKYISEMKQLTILNIGSN-EITDRVNFE 291
Query: 135 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 194
+ ++ L +L++ + + + +S LQNL++LD+ G V + + + +L L+
Sbjct: 292 NFGQLNQLTELYIEDNSIQTNACKYISQLQNLNLLDISGNNVDAEGAKYISQMNQLTELE 351
Query: 195 LWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 225
+ + + N GA + L +L L V+
Sbjct: 352 IHTNSLGNEGAKHISTMKELEYLYLCDNDVS 382
>gi|290984863|ref|XP_002675146.1| LRR_RI domain-containing protein [Naegleria gruberi]
gi|284088740|gb|EFC42402.1| LRR_RI domain-containing protein [Naegleria gruberi]
Length = 458
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 116/276 (42%), Gaps = 28/276 (10%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N++ Y+ + L +LN+ R+ ++ M L LD+ + + G
Sbjct: 204 GNNNIGEPGAEYISQMKQLTNLNIHG-NRIGDKGARHISEMEGLTHLDIGYN-NLGNLGS 261
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
++L + L L++ L +G +S L+ L++L +G + R + + +L L
Sbjct: 262 QYLSQMKKLTYLFIEGNRLDENGAKFVSELKQLTILCIGANGIGPNGARYITEMKQLTDL 321
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLS 253
+ G+++ GA LK +L+ LN+ + + L + FI +
Sbjct: 322 SIGGAKIGEEGARHLKTMNQLTNLNIGY---------NRLGSIGAKFISE---------- 362
Query: 254 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 313
+ L L++ + D +S K L L + ++TD +S L++LT+
Sbjct: 363 ------MKQLTSLDIFYNNIEDEGAKHISELKNLRKLDIGRNNITDEGAKYVSQLNQLTH 416
Query: 314 LSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTED 349
LSI L++ G L LD+ GG +++D
Sbjct: 417 LSITYNNLSDEGAKYINTMTQLTKLDI-GGNAISDD 451
>gi|340057619|emb|CCC51965.1| conserved hypothetical protein [Trypanosoma vivax Y486]
Length = 872
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 129/289 (44%), Gaps = 32/289 (11%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + +E L R L L A R+ + L ++ G+ CL+ELDL+ +TD G
Sbjct: 334 NRMPSEGFKGLANLRGLEVLRFAVLNRILT--LESIAGIQCLRELDLTD-NWLTDEGCAF 390
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
L S LE L L+ +D + + +L +L LDL V + L SL+ + LE L L
Sbjct: 391 LAHCSQLEHLKLAYCRSVSD-VRWVRALTSLQTLDLSYTSVLNCFLDSLRSCSSLEELSL 449
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNIS-SLECLNLSFIQQVG---AETDL- 250
A K +SF+ G+ L ++ S C++ S + VG A T+L
Sbjct: 450 ----------AYCKDVVDISFV----VGLNCLKSLDVSGTCVDESGLSSVGKCPALTNLS 495
Query: 251 ------VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLH 303
V L + L L LN E T + D + ++ ++L LS RN LTDV
Sbjct: 496 LRECRQVAGLKFVGALKQLINLNAEGTGMLDGNIDHITCCQKLEVLSFRNCPFLTDVRC- 554
Query: 304 QLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAIL 352
L L L L + A +T+ G+ + SL+ +D+ G L+T L
Sbjct: 555 -LKDLGGLKALDLAGAYVTDEGVSTLSHCTSLESIDVSGCCLITHFGFL 602
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 126/306 (41%), Gaps = 49/306 (16%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
VD ++ +G L +L++ +CR+V + L + + L L+ + + D + H+
Sbjct: 477 VDESGLSSVGKCPALTNLSLRECRQV--AGLKFVGALKQLINLN-AEGTGMLDGNIDHIT 533
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
LE L D + L L L LDL G VTD + +L T LE +D+ G
Sbjct: 534 CCQKLEVLSFRNCPFLTD-VRCLKDLGGLKALDLAGAYVTDEGVSTLSHCTSLESIDVSG 592
Query: 198 SQVSNR-----GAAVLKMFPRLSFLNLAWTGVTKLPN---ISSLECLNLSFIQQVGAE-- 247
+ G L+ + G+ K P+ +S +E LSF+ V A
Sbjct: 593 CCLITHFGFLIGLTKLRNVVANGMNVVNVDGLLKSPSMERVSLVESRRLSFVGHVAAARL 652
Query: 248 TDLVLSLTALQNLN---------HLERLNLEQ-----------------------TQVSD 275
T+L + + + N+ L+RL+L+Q T VS
Sbjct: 653 TELSVENSNISNVGINAVLEGCYSLQRLSLQQCPAISDLQGVSLLPKLQELLLRSTAVSR 712
Query: 276 ATLFPLSTFKELIHLSLRN-ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRS 334
++ ++ + L L + + A +TDV++ L SL L +L + +T G+ +
Sbjct: 713 ESVAQIAACENLRRLQISDCADVTDVNI--LCSLQSLVDLDLSKTNVTTGGVKGLAQCSA 770
Query: 335 LKLLDL 340
LK L+L
Sbjct: 771 LKKLNL 776
>gi|348568240|ref|XP_003469906.1| PREDICTED: F-box/LRR-repeat protein 13-like [Cavia porcellus]
Length = 829
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 138/286 (48%), Gaps = 21/286 (7%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLK--ELDLSRCVKVTDAGMKHLL-SISTLEK 144
F L++L++A CR+ T L L G C K LDLS C +++ G +++ S S +
Sbjct: 388 FHNLQNLSLAYCRKFTDKGLQYLNLGKGCHKLIYLDLSGCTQISVQGFRNIANSCSGIIH 447
Query: 145 LWLSETGLTADGI--ALLSSLQNL-SVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQ-V 200
L +++ D AL+ QN+ SV+ +G ++D +L L+ + G++ +
Sbjct: 448 LTMNDMPTLTDKCVQALVEKCQNITSVVFIGSPHISDRAFNALST-CNLKKIRFEGNKRI 506
Query: 201 SNRGAAVL-KMFPRLSFLNLA-WTGVTK-----LPNISSLECLNLSFIQQVGAETDLVLS 253
++ + K +P ++ + +A G+T L + L LNL+ ++G +T L
Sbjct: 507 TDASFKFIDKKYPNINHIYMADCKGITDDSLKSLSPLKQLTVLNLANCVRIG-DTGLKHF 565
Query: 254 LTALQNLNHLERLNLEQ-TQVSDATLFPLST-FKELIHLSLRNAS-LTDVSLHQLSSLSK 310
L ++ + LNL +SD ++ LS L +LSLRN +TD + + +L
Sbjct: 566 LDGPSSI-RIRELNLSNCVHLSDISVLRLSERCLNLNYLSLRNCEHVTDQGIEFIVNLFS 624
Query: 311 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 356
L +L + ++N GL S + LK L L + +T I+ FCK
Sbjct: 625 LVSLDVSGTDISNEGLVSLSRHKKLKELSLSECYKITNLGIVAFCK 670
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 14/206 (6%)
Query: 66 NAEAIELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSR 124
N + I G + DA + + + + +ADC+ +T +L +L+ + L L+L+
Sbjct: 494 NLKKIRFEGNKRITDASFKFIDKKYPNINHIYMADCKGITDDSLKSLSPLKQLTVLNLAN 553
Query: 125 CVKVTDAGMKHLL---SISTLEKLWLSETGLTADGIALLSSLQ--NLSVLDLGGLP-VTD 178
CV++ D G+KH L S + +L LS +D L S + NL+ L L VTD
Sbjct: 554 CVRIGDTGLKHFLDGPSSIRIRELNLSNCVHLSDISVLRLSERCLNLNYLSLRNCEHVTD 613
Query: 179 LVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA-WTGVTKLPNIS------ 231
+ + L L LD+ G+ +SN G L +L L+L+ +T L ++
Sbjct: 614 QGIEFIVNLFSLVSLDVSGTDISNEGLVSLSRHKKLKELSLSECYKITNLGIVAFCKSSL 673
Query: 232 SLECLNLSFIQQVGAETDLVLSLTAL 257
+LE L++S+ Q+ E L++ +
Sbjct: 674 TLELLDVSYCPQLSNEIVKALAIYCV 699
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 123/253 (48%), Gaps = 42/253 (16%)
Query: 117 LKELDLSRCVKVTDAGMKHLL-SISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 171
L+EL++S C +TD M+H+ + L LS T +T + LL +LQNLS+
Sbjct: 340 LQELNVSDCPTLTDELMRHISEGCPGILYLNLSNTTITNRTMRLLPRNFHNLQNLSLAYC 399
Query: 172 GGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLA--WTGVT 225
TD L+ L + KL YLDL G +Q+S +G F N+A +G+
Sbjct: 400 RKF--TDKGLQYLNLGKGCHKLIYLDLSGCTQISVQG-----------FRNIANSCSGII 446
Query: 226 KL-----PNISSL-------ECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE-QTQ 272
L P ++ +C N++ + +G+ + AL N L+++ E +
Sbjct: 447 HLTMNDMPTLTDKCVQALVEKCQNITSVVFIGSPHISDRAFNALSTCN-LKKIRFEGNKR 505
Query: 273 VSDATL-FPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSF 329
++DA+ F + + H+ + + +TD SL LS L +LT L++ + V + ++GL F
Sbjct: 506 ITDASFKFIDKKYPNINHIYMADCKGITDDSLKSLSPLKQLTVLNLANCVRIGDTGLKHF 565
Query: 330 -KPPRSLKLLDLH 341
P S+++ +L+
Sbjct: 566 LDGPSSIRIRELN 578
>gi|357615345|gb|EHJ69606.1| hypothetical protein KGM_07261 [Danaus plexippus]
Length = 438
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 85/170 (50%), Gaps = 10/170 (5%)
Query: 61 EVFKHNA------EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGM 114
E KH A ++I L +V + +L +L +N+ C V+ + + L
Sbjct: 264 EALKHAATGLPKLKSINLSFCVAVTDAGLRHLARLPHLEDVNLRACDGVSDAGVAHLAES 323
Query: 115 TCLKELDLSRCVKVTDAGMKH-LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 173
L+ LD+S C KV D + H L +S L L LS LT +G+ ++ L L L++G
Sbjct: 324 GRLRALDVSFCDKVGDEALSHATLGLSGLRCLSLSACRLTDEGLERVARLSQLETLNIGQ 383
Query: 174 LP-VTDLVLRSL-QVLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLA 220
VTD LR+L + L L+ +DL+G + +++ G + PRLS LNL
Sbjct: 384 CTQVTDRGLRALGEGLKNLKAIDLYGCTCITHEGLDHIVKLPRLSVLNLG 433
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 141/334 (42%), Gaps = 85/334 (25%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWAL--TGMTCLKELDLSRCVKVTDAGMKHLL-SISTL 142
+ A L SL+++ C VT +AL + T + LK LDLS C +VTD+ + + S+ L
Sbjct: 134 VAALPGLESLSLSGCYSVTDAALASAFATELPALKRLDLSLCKQVTDSSLGRIAQSLKNL 193
Query: 143 EKLWL------SETGL---------------------TADGIALLSS---------LQNL 166
E+L L ++TGL DGIA L L++L
Sbjct: 194 EELELGGCCNVTDTGLLLIAWGLRKLRRLNLRSCWHVNDDGIAHLCGGGEARGTPELEHL 253
Query: 167 SVLDLGGLPVTDLVLRSLQV-LTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNL----- 219
+ D L TD L+ L KL+ ++L + V++ G L P L +NL
Sbjct: 254 GLQDCQRL--TDEALKHAATGLPKLKSINLSFCVAVTDAGLRHLARLPHLEDVNLRACDG 311
Query: 220 -AWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATL 278
+ GV L L L++SF +VG E +S ATL
Sbjct: 312 VSDAGVAHLAESGRLRALDVSFCDKVGDEA------------------------LSHATL 347
Query: 279 FPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPP-RSLK 336
L LSL LTD L +++ LS+L L+I +T+ GL + ++LK
Sbjct: 348 ----GLSGLRCLSLSACRLTDEGLERVARLSQLETLNIGQCTQVTDRGLRALGEGLKNLK 403
Query: 337 LLDLHGGWLLTEDAILQFCKMHPRIEV-----WH 365
+DL+G +T + + K+ PR+ V WH
Sbjct: 404 AIDLYGCTCITHEGLDHIVKL-PRLSVLNLGLWH 436
>gi|168700135|ref|ZP_02732412.1| hypothetical protein GobsU_11445 [Gemmata obscuriglobus UQM 2246]
Length = 120
Score = 58.9 bits (141), Expect = 5e-06, Method: Composition-based stats.
Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 4/118 (3%)
Query: 108 LWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLS 167
L AL G+T L D KVTD G+K L + L +L L+ T +T G+ LS L L+
Sbjct: 4 LAALKGLTQLDLFD----TKVTDVGVKELSGLKGLTRLELTFTQVTDAGVKALSGLTALT 59
Query: 168 VLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 225
LDLG VTD +++L L L L+L + V++ G L L+ L+L++T VT
Sbjct: 60 TLDLGFTKVTDAGVKALSGLKHLIQLNLGVTVVTDAGVKALAGLKGLTILDLSFTRVT 117
Score = 54.7 bits (130), Expect = 9e-05, Method: Composition-based stats.
Identities = 44/122 (36%), Positives = 69/122 (56%), Gaps = 2/122 (1%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
M L A + L L++ D + VT + L+G+ L L+L+ +VTDAG+K L ++ L
Sbjct: 1 MKELAALKGLTQLDLFDTK-VTDVGVKELSGLKGLTRLELT-FTQVTDAGVKALSGLTAL 58
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
L L T +T G+ LS L++L L+LG VTD +++L L L LDL ++V++
Sbjct: 59 TTLDLGFTKVTDAGVKALSGLKHLIQLNLGVTVVTDAGVKALAGLKGLTILDLSFTRVTD 118
Query: 203 RG 204
G
Sbjct: 119 AG 120
Score = 51.2 bits (121), Expect = 9e-04, Method: Composition-based stats.
Identities = 42/119 (35%), Positives = 61/119 (51%), Gaps = 5/119 (4%)
Query: 133 MKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 192
MK L ++ L +L L +T +T G+ LS L+ L+ L+L VTD +++L LT L
Sbjct: 1 MKELAALKGLTQLDLFDTKVTDVGVKELSGLKGLTRLELTFTQVTDAGVKALSGLTALTT 60
Query: 193 LDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSFIQQVGA 246
LDL ++V++ G L L LNL T GV L + L L+LSF + A
Sbjct: 61 LDLGFTKVTDAGVKALSGLKHLIQLNLGVTVVTDAGVKALAGLKGLTILDLSFTRVTDA 119
Score = 45.4 bits (106), Expect = 0.056, Method: Composition-based stats.
Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 25/145 (17%)
Query: 181 LRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSF 240
++ L L L LDL+ ++V++ GV +L + L L L+F
Sbjct: 1 MKELAALKGLTQLDLFDTKVTD-------------------VGVKELSGLKGLTRLELTF 41
Query: 241 IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 300
Q A + AL L L L+L T+V+DA + LS K LI L+L +TD
Sbjct: 42 TQVTDA------GVKALSGLTALTTLDLGFTKVTDAGVKALSGLKHLIQLNLGVTVVTDA 95
Query: 301 SLHQLSSLSKLTNLSIRDAVLTNSG 325
+ L+ L LT L + +T++G
Sbjct: 96 GVKALAGLKGLTILDLSFTRVTDAG 120
Score = 44.7 bits (104), Expect = 0.11, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 43/84 (51%)
Query: 257 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 316
L L L RL L TQV+DA + LS L L L +TD + LS L L L++
Sbjct: 28 LSGLKGLTRLELTFTQVTDAGVKALSGLTALTTLDLGFTKVTDAGVKALSGLKHLIQLNL 87
Query: 317 RDAVLTNSGLGSFKPPRSLKLLDL 340
V+T++G+ + + L +LDL
Sbjct: 88 GVTVVTDAGVKALAGLKGLTILDL 111
Score = 38.1 bits (87), Expect = 8.7, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 44/87 (50%)
Query: 254 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 313
+ L L L +L+L T+V+D + LS K L L L +TD + LS L+ LT
Sbjct: 1 MKELAALKGLTQLDLFDTKVTDVGVKELSGLKGLTRLELTFTQVTDAGVKALSGLTALTT 60
Query: 314 LSIRDAVLTNSGLGSFKPPRSLKLLDL 340
L + +T++G+ + + L L+L
Sbjct: 61 LDLGFTKVTDAGVKALSGLKHLIQLNL 87
>gi|301767326|ref|XP_002919089.1| PREDICTED: f-box/LRR-repeat protein 2-like [Ailuropoda melanoleuca]
Length = 404
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 162/342 (47%), Gaps = 26/342 (7%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC-LKELDLSRCVK 127
+ LRG V D+ + R + LN+ C ++T S ++L+ LK LDL+ CV
Sbjct: 64 LSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVS 123
Query: 128 VTDAGMKHLL-SISTLEKLWLSETG-LTADGI-ALLSSLQNLSVLDLGGLP-VTDLVLRS 183
+T++ +K + LE L LS +T DGI AL+ + L L L G + D L+
Sbjct: 124 ITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKH 183
Query: 184 LQ-VLTKLEYLDLWG-SQVSNRGAA-VLKMFPRLSFLNLAWTGVTKLPNIS----SLECL 236
+Q +L L+ S++++ G + + RL L L +G + L + S +L C
Sbjct: 184 IQNYCHELVSLNFQSCSRITDEGVVQICRGCHRLQALCL--SGCSNLTDASLTALALNCP 241
Query: 237 NLSFIQQVGAE--TDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTF-KELIHLSL 292
L ++ TD +L A +N + LE+++LE+ ++D+TL LS +L LSL
Sbjct: 242 RLQILEAARCSHLTDAGFTLLA-RNCHDLEKMDLEECILITDSTLVQLSVHCPKLQALSL 300
Query: 293 RNASL-TDVSLHQLSSLS----KLTNLSIRDAVL-TNSGLGSFKPPRSLKLLDLHGGWLL 346
+ L TD + LS+ + +L L + + +L T+ L + R L+ L+L+ +
Sbjct: 301 SHCELITDDGILHLSNSTCGHERLRVLELDNCLLITDVALEHLENCRGLERLELYDCQQV 360
Query: 347 TEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSL 388
T I + P ++V + + P +G +G R +
Sbjct: 361 TRAGIKRMRAQLPHVKVHAYFAPVTPPTAVGGSGQRLCRCCV 402
>gi|66807643|ref|XP_637544.1| hypothetical protein DDB_G0286583 [Dictyostelium discoideum AX4]
gi|60465980|gb|EAL64047.1| hypothetical protein DDB_G0286583 [Dictyostelium discoideum AX4]
Length = 722
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 113/240 (47%), Gaps = 31/240 (12%)
Query: 86 LGAFRYLRSL-NVA--DCRRVTSSALWALTGMTC---LKELDLSRCVKVTDAGMKHLLSI 139
L F+Y+ L NV +C + L LK LDL R ++TD G+++L +
Sbjct: 339 LNCFKYMAELSNVYFRNCENLNDIGLQIFRQPNFEKNLKTLDL-RDNRITDVGIRNLKGL 397
Query: 140 STLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQ 199
LE+L+L TG T G+ALL +L L LD+ +TD + + T+L++L L G+Q
Sbjct: 398 LNLEELYLGSTGCTDIGLALLCNLLKLKTLDVSKCNITDSSMDIICRFTELKFLYLSGTQ 457
Query: 200 VSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQN 259
V+++G + P L + L + ++ N S L F+ +G
Sbjct: 458 VTDKGINTISKLPNL--IQLYVSNCLRITNQS------LFFLAYLGKT------------ 497
Query: 260 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN-ASLTDVSLHQLSSLSKLTNLSIRD 318
L+ L++ QT++ L FK+L L L S+ D ++ L+SLS L L + D
Sbjct: 498 ---LKLLDIFQTKIGLNGFIQLRMFKQLQFLVLPGRDSINDATIGHLNSLSNLRKLDLSD 554
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 145/346 (41%), Gaps = 71/346 (20%)
Query: 59 LLEVFKHNAEAIELRGENSVDAEWMAYLGAFR---YLRSLNVADCR--RVTSSALWALTG 113
LL FK+ AE + N + + L FR + ++L D R R+T + L G
Sbjct: 338 LLNCFKYMAELSNVYFRNCENLNDIG-LQIFRQPNFEKNLKTLDLRDNRITDVGIRNLKG 396
Query: 114 MTCLKEL------------------------DLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L+EL D+S+C +TD+ M + + L+ L+LS
Sbjct: 397 LLNLEELYLGSTGCTDIGLALLCNLLKLKTLDVSKC-NITDSSMDIICRFTELKFLYLSG 455
Query: 150 TGLTADGIALLSSLQNLSVLDLGG-LPVTDLVLRSLQVLTK-LEYLDLWGSQVSNRGAAV 207
T +T GI +S L NL L + L +T+ L L L K L+ LD++ +++ G
Sbjct: 456 TQVTDKGINTISKLPNLIQLYVSNCLRITNQSLFFLAYLGKTLKLLDIFQTKIGLNGFIQ 515
Query: 208 LKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLN 261
L+MF +L FL L + L ++S+L L+LS + + L+ L NL
Sbjct: 516 LRMFKQLQFLVLPGRDSINDATIGHLNSLSNLRKLDLSDYRNIS-------DLSPLTNLQ 568
Query: 262 HLERLNLEQTQVSDATLF-PLSTFKELIHLSLRNASLT---------------------- 298
L L L T++SD ++ + T L LSL +T
Sbjct: 569 SLTELLLSNTKISDNSIINSIKTMDSLEVLSLNKTEVTTEGVSQLVNLNLTSLSLSSTKI 628
Query: 299 -DVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP-PRSLKLLDLHG 342
SL+ L + L L I +T++ + KP +L +DL G
Sbjct: 629 DGKSLYYLGQMKSLQKLDISFNDITDNSMDYLKPIADTLSHIDLRG 674
>gi|84043404|ref|XP_951492.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|33348240|gb|AAQ15567.1| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
gi|62358736|gb|AAX79191.1| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei]
Length = 1394
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 124/292 (42%), Gaps = 62/292 (21%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
+ S + ++ L +L +S C +TDA + +S LE+L L+ GI L
Sbjct: 236 IDDSCIGEISACAKLSKLSVSECNNITDA--TPISQLSALEELNLNSCYHITKGIGTLGM 293
Query: 163 LQNLSVLDLGGLPVTDLVLR------SLQVL-----------------TKLEYLDLWGSQ 199
L L +LDL G+PV D L+ SL+ L T +E L+L G +
Sbjct: 294 LLRLRILDLSGVPVEDNCLKDLCDCGSLERLNISYCIQLTDINPLSNATAIEELNLNGCR 353
Query: 200 VSNRGAAVLKMFPRLSFLNL----------------------------AWTGVTKLPNIS 231
RG V+ P+L L++ + +T L +I
Sbjct: 354 RITRGIGVVWALPKLRVLHMKDVHLSEPSLDSVGTGGPLVKVSLDNCAGFGDMTLLSSIV 413
Query: 232 SLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 291
+LE LN IQ+ D++ + +L L +L LN+++ +S + K L+ L+
Sbjct: 414 TLEELN---IQKCA---DIISGVGSLGTLPYLRVLNIKEAHISSLDFTGIGASKSLLQLN 467
Query: 292 LRNAS-LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 342
+ + + L DV L+++ L LS+ ++G+G LK+LDL G
Sbjct: 468 MESITGLIDV--EALANILTLEKLSLHGCTGIDAGIGCLGNLPQLKMLDLSG 517
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 117/286 (40%), Gaps = 44/286 (15%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+ LG YLR LN+ + ++S + L +L++ + D ++ L +I TL
Sbjct: 430 VGSLGTLPYLRVLNIKE-AHISSLDFTGIGASKSLLQLNMESITGLID--VEALANILTL 486
Query: 143 EKLWLSE-TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL---QVLTKLEYLDLWG- 197
EKL L TG+ A GI L +L L +LDL G + LRSL Q + L W
Sbjct: 487 EKLSLHGCTGIDA-GIGCLGNLPQLKMLDLSGTNTDNESLRSLCLSQTVVSLNLSHCWKM 545
Query: 198 ---SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLP---------------NIS------SL 233
S +S+ A +N W + KL NIS +L
Sbjct: 546 TNVSHISSLEALNELNLSNCFGINAGWEAIEKLQQLHVAILSNTHITDRNISHFSKCKNL 605
Query: 234 ECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 293
L+LSF ++ L +TAL N+ LE LNL+ L L L L+++
Sbjct: 606 VTLDLSFCNKL-------LDVTALSNITTLEELNLDSCSNIRKGLSVLGELPRLCVLNIK 658
Query: 294 NASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 339
L D + L + L +S+ D +G G P +L L+
Sbjct: 659 GVQLEDSVIVSLGNGGSLVKVSLDDC----AGFGDVTPLSNLVTLE 700
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 121/280 (43%), Gaps = 52/280 (18%)
Query: 108 LWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLS 167
+ +L + LK L L R + + +HL +I TLE+L +++T + I +S L NL
Sbjct: 170 IISLNNLDMLKRLCL-RSNNIDNNDARHLFNIGTLEELAITDT-MQLTNIRGISRLTNLK 227
Query: 168 VLDLGGLPVTDLVLRSLQVLTK-----------------------LEYLDLWGSQVSNRG 204
L+L + D + + K LE L+L +G
Sbjct: 228 CLELNSTDIDDSCIGEISACAKLSKLSVSECNNITDATPISQLSALEELNLNSCYHITKG 287
Query: 205 AAVLKMFPRLSFLNLAWTGV-----TKLPNISSLECLNLSFIQQVGAETDLVLSLTALQN 259
L M RL L+L+ V L + SLE LN+S+ Q+ + + + + TA++
Sbjct: 288 IGTLGMLLRLRILDLSGVPVEDNCLKDLCDCGSLERLNISYCIQL-TDINPLSNATAIEE 346
Query: 260 LN------------------HLERLNLEQTQVSDATLFPLSTFKELIHLSLRN-ASLTDV 300
LN L L+++ +S+ +L + T L+ +SL N A D+
Sbjct: 347 LNLNGCRRITRGIGVVWALPKLRVLHMKDVHLSEPSLDSVGTGGPLVKVSLDNCAGFGDM 406
Query: 301 SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
+L LSS+ L L+I+ SG+GS L++L++
Sbjct: 407 TL--LSSIVTLEELNIQKCADIISGVGSLGTLPYLRVLNI 444
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 93/244 (38%), Gaps = 39/244 (15%)
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLG--------------GLPVTDLVL 181
L +I++LE+L L E G G+ L L L LDLG +T L L
Sbjct: 1122 LSNITSLEELSLRECGDNLGGVGTLEKLPRLKSLDLGLSDISNSTLNYIFLSRSITSLNL 1181
Query: 182 RS---------LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK------ 226
S + LT LE L+L G G L PRL LNL T VT
Sbjct: 1182 DSSWELTDISHISNLTALEELNLGGCYYITSGWKALSELPRLRVLNLESTRVTTRYDGYY 1241
Query: 227 LPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 286
+ SL LNL A + + N+ LE L++ + + L T
Sbjct: 1242 ISRCKSLVTLNLELCDMTDA--------SYIANIKTLEELHIGKCKELTQGFSALFTLPR 1293
Query: 287 LIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN--SGLGSFKPPRSLKLLDLHGGW 344
L L+L + +TD L ++ + L++ V N + LG K + L L H
Sbjct: 1294 LRILNLICSLITDEDLREIQPPHTIEELNLSYCVELNDITPLGRIKSIKKLHLRQSHDAR 1353
Query: 345 LLTE 348
TE
Sbjct: 1354 RSTE 1357
>gi|158429242|pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 120/226 (53%), Gaps = 18/226 (7%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L S +VTD +K L +++TLE+L
Sbjct: 122 IDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFSSN-QVTD--LKPLANLTTLERL 178
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 179 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIGT 234
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++ + + +++ L L L
Sbjct: 235 --LASLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTN 287
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 288 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 329
>gi|158429244|pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 120/226 (53%), Gaps = 18/226 (7%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L S +VTD +K L +++TLE+L
Sbjct: 122 IDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFSSN-QVTD--LKPLANLTTLERL 178
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 179 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIGT 234
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++ + + +++ L L L
Sbjct: 235 --LASLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTN 287
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 288 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 329
>gi|219821258|gb|ACL37750.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 120/226 (53%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ A + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 99 IDALKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERL 154
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 155 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 209
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++ + + +++ L L L
Sbjct: 210 -TLASLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTN 263
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 264 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 305
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 88/168 (52%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I+ L++L NL+ L L +TD+ +L+ LT L L+L + +S+ A + L +LS
Sbjct: 77 ISPLANLTNLTGLTLFNNQITDI--DALKNLTNLNRLELSSNTISDISALSGLTNLQQLS 134
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 135 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 186 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 229
>gi|290980573|ref|XP_002673006.1| predicted protein [Naegleria gruberi]
gi|284086587|gb|EFC40262.1| predicted protein [Naegleria gruberi]
Length = 361
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 124/261 (47%), Gaps = 13/261 (4%)
Query: 85 YLGAFRYLRSLNVADCRRVTSSALWA-LTGMTCLKELDLSRCVKVTDAGMKHLLSISTLE 143
YL L+++N D + + L L GM LKE+ + + +K G+K + S+ L
Sbjct: 83 YLNRIVSLKTVNSFDGSIIDNVELCEILQGMKDLKEVWIYKQLKGV-KGIKKIGSLKQLT 141
Query: 144 KLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNR 203
L +S + G+ L+ L L+ L +G + D ++ + + +L LDL ++ +
Sbjct: 142 ILDVSYNDIGYGGVKWLTQLSQLTELRIGNNSIFDDDIKMISEMKQLTKLDLSNCRIMD- 200
Query: 204 GAAVLKMFPRLSFLNLAWTGVT--KLPNISSLECLNLSFI--QQVGAETDLVLSLTALQN 259
G L L+ L L +T ++ +IS+L+ L +I Q+G E ++ N
Sbjct: 201 GVQYLSKLENLTSLRLCGNRLTDERVESISNLKQLTELYIGENQLGTE-----GAKSIGN 255
Query: 260 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 319
+ L RLN++Q ++S + L L L++ + D + +S +++LT L+IRD
Sbjct: 256 MTQLTRLNIQQNRISQGVKY-LEKLDRLTDLNISKNKIGDTGVIIISEMNQLTKLTIRDN 314
Query: 320 VLTNSGLGSFKPPRSLKLLDL 340
++ G + + L LD+
Sbjct: 315 KISEEGAKTLGLLQKLTYLDI 335
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 112/252 (44%), Gaps = 30/252 (11%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+G+ + L L+V+ W LT ++ L EL + + D +K + + L KL
Sbjct: 134 IGSLKQLTILDVSYNDIGYGGVKW-LTQLSQLTELRIGNN-SIFDDDIKMISEMKQLTKL 191
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
LS + DG+ LS L+NL+ L L G +TD + S+ L +L L + +Q+ GA
Sbjct: 192 DLSNCRI-MDGVQYLSKLENLTSLRLCGNRLTDERVESISNLKQLTELYIGENQLGTEGA 250
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
+ +L+ LN+ +++ + L+ L+ L
Sbjct: 251 KSIGNMTQLTRLNIQQNRISQ--------------------------GVKYLEKLDRLTD 284
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 325
LN+ + ++ D + +S +L L++R+ +++ L L KLT L I D ++N
Sbjct: 285 LNISKNKIGDTGVIIISEMNQLTKLTIRDNKISEEGAKTLGLLQKLTYLDISDNSVSNVT 344
Query: 326 LGSF-KPPRSLK 336
S K +SLK
Sbjct: 345 ANSMQKNMKSLK 356
>gi|887862|gb|AAA69530.1| internalin, partial [Listeria monocytogenes]
Length = 344
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 117/224 (52%), Gaps = 21/224 (9%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L L +VTD +K L +++TLE+L +S
Sbjct: 86 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSLGN--QVTD--LKPLANLTTLERLDIS 141
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AV 207
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G A
Sbjct: 142 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIGTLAS 197
Query: 208 LKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLN 267
L L N + + LP ++ L L ++GA + ++ L L L L
Sbjct: 198 LTNLTDLDLANNQISNLAPLPGLTKLTEL------KLGANQ--ISNIXPLAGLTALTNLE 249
Query: 268 LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 250 LNENQLEDIS--PISNLKNLTYLTLYFNNISDIS--PVSSLTKL 289
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 92/189 (48%), Gaps = 22/189 (11%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 61 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 118
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 119 LGN-QVTDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 169
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP-PRS 334
T PL L LSL L D+ +L+ LTNL+ D L N+ + + P P
Sbjct: 170 IT--PLGILTNLDELSLNGNQLKDI-----GTLASLTNLT--DLDLANNQISNLAPLPGL 220
Query: 335 LKLLDLHGG 343
KL +L G
Sbjct: 221 TKLTELKLG 229
>gi|320163275|gb|EFW40174.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 989
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 98/216 (45%), Gaps = 30/216 (13%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
VT+ L A+ + L+EL + VT G+ H+ ++ L L L T L + +S
Sbjct: 500 VTNELLCAMRFFSLLQELSIRSAEFVTHVGINHIAGLNNLRVLDLGITRLNDQAMPTISQ 559
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVL-TKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLA 220
L L+VL+L +TD L L L L++LD+ S+++ RG A+L FP+L L +A
Sbjct: 560 LP-LTVLNLERTLITDSGLARLAPLGATLQHLDISDCSKLTERGLALLAAFPQLRTLAIA 618
Query: 221 WTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFP 280
+T + +S N L LNL +T + + L
Sbjct: 619 GLPLTDVGRLS---------------------------NFPELRSLNLARTAIVEGKLDS 651
Query: 281 LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 316
+ + L+HLSL N L D + L L+ L++L +
Sbjct: 652 IRRYIHLVHLSLANTKLGDNDVRYLQYLTNLSSLKL 687
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 69/137 (50%), Gaps = 5/137 (3%)
Query: 92 LRSLNVADCRRVTSSALWALTGMT-CLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET 150
L L++ D VT + ++ + L L LS K+T AG+ + + + LE L L T
Sbjct: 706 LTELDLTDYIHVTDEGIQFISALAPTLVSLSLSNT-KLTSAGIPAVAACTKLEVLQLDRT 764
Query: 151 GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRS--LQVLTKLEYLDLWGSQVSNRGAAVL 208
L D I LL+ L L L L +T V+RS T+LE L+L + + N+G L
Sbjct: 765 PLKDDVIPLLAPLTRLRTLSLSRTHLTSAVVRSGAFSPFTRLESLNLSWTFIENQGLDQL 824
Query: 209 KMFPRLSFLNLAWTGVT 225
++ P L+ LNL T VT
Sbjct: 825 RL-PMLTTLNLDSTRVT 840
>gi|149242641|pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
gi|149242643|pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 119/223 (53%), Gaps = 19/223 (8%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L+ +VTD +K L +++TLE+L +S
Sbjct: 125 LKNLTNLNRLELSSNTISDISALSGLTSLQQLNFGN--QVTD--LKPLANLTTLERLDIS 180
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 181 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIGT--L 234
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNL 268
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 235 ASLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLEL 289
Query: 269 EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 290 NENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 328
Score = 41.2 bits (95), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +L+
Sbjct: 100 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLN 157
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 158 FGN-QVTDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 208
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 209 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 252
>gi|395738820|ref|XP_002818356.2| PREDICTED: F-box/LRR-repeat protein 13 isoform 2 [Pongo abelii]
Length = 684
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 132/281 (46%), Gaps = 21/281 (7%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLK--ELDLSRCVKVTDAGMKHLL-SISTLEK 144
F L++L++A CRR T L L G C K LDLS C +++ G +++ S + +
Sbjct: 385 FHNLQNLSLAYCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGVMH 444
Query: 145 LWLSETGLTADGI--ALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQVS 201
L +++ D AL+ ++ L G P +TD ++L KL + G++
Sbjct: 445 LTINDMPTLTDNCVKALVEKCSRITSLVFTGAPHITDCTFKALST-CKLRKIRFEGNKRV 503
Query: 202 NRGA--AVLKMFPRLSFLNLA-WTGVT-----KLPNISSLECLNLSFIQQVGAETDLVLS 253
+ +V K +P LS + +A G+T L + L LNL+ ++G + L
Sbjct: 504 TDASFKSVDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIG-DMGLKQF 562
Query: 254 LTALQNLNHLERLNLEQ-TQVSDATLFPLST-FKELIHLSLRNAS-LTDVSLHQLSSLSK 310
L ++ + LNL Q+SDA++ LS L +LSLRN LT + + ++
Sbjct: 563 LDGPASIK-IRELNLSNCVQLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNIFS 621
Query: 311 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 351
L ++ + ++N GL + LK L + + +T+D I
Sbjct: 622 LVSIDLSGTDISNEGLNVLSRHKKLKELSVSECYRITDDGI 662
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 9/159 (5%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV 128
I G V DA + + + L + +ADC+ +T S+L +L+ + L L+L+ CV++
Sbjct: 495 IRFEGNKRVTDASFKSVDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRI 554
Query: 129 TDAGMKHLL----SISTLEKLWLSETGLTADG--IALLSSLQNLSVLDLGGLP-VTDLVL 181
D G+K L SI + +L LS +D + L NL+ L L +T +
Sbjct: 555 GDMGLKQFLDGPASIK-IRELNLSNCVQLSDASVMKLSERCPNLNYLSLRNCEHLTAQGI 613
Query: 182 RSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA 220
+ + L +DL G+ +SN G VL +L L+++
Sbjct: 614 GYIVNIFSLVSIDLSGTDISNEGLNVLSRHKKLKELSVS 652
Score = 41.6 bits (96), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 118/253 (46%), Gaps = 42/253 (16%)
Query: 117 LKELDLSRCVKVTDAGMKHLL-SISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 171
L+EL++S C TD M+H+ + L LS T +T + LL +LQNLS+
Sbjct: 337 LQELNVSDCPTFTDESMRHISEGCPGVLYLNLSNTTITNRTMRLLPRHFHNLQNLSLAYC 396
Query: 172 GGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWTGVTKL 227
TD L+ L + KL YLDL G +Q+S +G ++ + TGV L
Sbjct: 397 RRF--TDKGLQYLNLGNGCHKLIYLDLSGCTQISVQG---------FRYIANSCTGVMHL 445
Query: 228 -----PNISSLECLNLSFIQQVGAETDLVL---------SLTALQNLNHLERLNLE-QTQ 272
P ++ C+ + +++ T LV + AL L ++ E +
Sbjct: 446 TINDMPTLTD-NCVK-ALVEKCSRITSLVFTGAPHITDCTFKALSTCK-LRKIRFEGNKR 502
Query: 273 VSDATLFPL-STFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSF 329
V+DA+ + + L H+ + + +TD SL LS L +LT L++ + V + + GL F
Sbjct: 503 VTDASFKSVDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGLKQF 562
Query: 330 -KPPRSLKLLDLH 341
P S+K+ +L+
Sbjct: 563 LDGPASIKIRELN 575
>gi|343416403|emb|CCD20380.1| leucine-rich repeat protein [Trypanosoma vivax Y486]
Length = 1256
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 129/293 (44%), Gaps = 42/293 (14%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L R L +L++ DC + L L G+T L+EL L R + V DA ++ L L +L
Sbjct: 627 LARMRSLENLDLNDCTGIVR-GLHVLCGLTTLQELCL-RQLSVDDAFLRDLTCHERLRRL 684
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL---TKLEYLDLWGSQVSN 202
L+ D ++ L+ +++L +LDL G ++R L VL T L+ L L V +
Sbjct: 685 SLNSCTRITD-VSPLARMRSLEILDLNGCTG---IVRGLHVLCGLTTLQELCLANVNVDD 740
Query: 203 RGAAVLKMFPRLSFLNLA----WTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQ 258
L RL L+L T V+ L + SLE LNL+ T +V L L
Sbjct: 741 AFVRDLTCHERLRRLSLNSCTRITDVSPLARMRSLEMLNLNDC------TGIVRGLHELC 794
Query: 259 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVS---------------- 301
L L+ L L + V DA L L+ + L LSL + + +TDVS
Sbjct: 795 GLTTLQELYLPKVYVDDAFLRDLTCHERLRRLSLNSCTRITDVSPLARMRSLEMLNLNGC 854
Query: 302 ------LHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 348
LH+L L+ L L +R + ++ L L+ L L+ +T+
Sbjct: 855 TGIVRGLHELCGLTTLQELYLRQMSVDDAFLRDLTCHERLRRLSLNSCTRITD 907
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 129/293 (44%), Gaps = 42/293 (14%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L R L L++ DC + L L G+T L+EL L+ V V DA ++ L L +L
Sbjct: 911 LARMRSLEMLDLNDCTGIVR-GLHELCGLTTLQELCLAN-VNVDDAFLRDLTCHERLREL 968
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL-DLWGSQVSNRG 204
L+ D ++ L+ +++L LDL G ++R L VL L L +L+ Q+S
Sbjct: 969 SLNSCTRITD-VSPLARMRSLEKLDLNGCTG---IVRGLHVLCGLTTLQELYLRQMSVDD 1024
Query: 205 AAV--LKMFPRLSFLNLA----WTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQ 258
A + L RL L+L T V+ L + SLE ++L+ T +V L L
Sbjct: 1025 ALLRDLTCHERLRRLSLNSCTRITDVSPLARMRSLENMDLNGC------TGIVRGLHVLC 1078
Query: 259 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVS---------------- 301
L L+ L L Q V DA L L+ + L LSL + + +TDVS
Sbjct: 1079 GLTTLQELYLRQMSVDDAFLRDLTCHERLRKLSLNSCTRITDVSPLARMRSLEMLDLNGC 1138
Query: 302 ------LHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 348
LH L L+ L L +R + ++ L L+ L L+ +T+
Sbjct: 1139 TGIVRGLHVLCGLTTLQELYLRQMCVDDAFLRDLTCHERLRRLSLNSCTRITD 1191
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 132/325 (40%), Gaps = 59/325 (18%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
E SVD ++ L LR L++ C R+T + L M L+ LDL+ C + G+
Sbjct: 379 AEVSVDDAFLRDLTCHERLRELSLNSCTRITD--VSPLARMRSLEMLDLNGCTGIV-RGL 435
Query: 134 KHLLSISTLEKLWLSETGLT-----------------------ADGIALLSSLQNLSVLD 170
L ++TL++L+L + + ++ L+ +++L +LD
Sbjct: 436 HELCGLTTLQELYLRQMSVDDALLRDLTCHERLRELSLNSCTRITDVSPLARMRSLEMLD 495
Query: 171 LGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA----WTGVTK 226
L G L L LT L+ L L V + L RL L+L T V+
Sbjct: 496 LNGCTGIVRGLHELCGLTTLQELYLRQMSVDDALLRDLTCHERLRELSLNSCTRITDVSP 555
Query: 227 LPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 286
L + SLE LNL+ T +V L L L L++L L V DA L L+ +
Sbjct: 556 LARMRSLEILNLNDC------TGIVRGLHVLCGLTTLQKLCLANVNVDDAFLRDLTCHER 609
Query: 287 LIHLSLRNAS-LTDVS----------------------LHQLSSLSKLTNLSIRDAVLTN 323
L LSL + + +TDVS LH L L+ L L +R + +
Sbjct: 610 LRELSLNSCTRITDVSPLARMRSLENLDLNDCTGIVRGLHVLCGLTTLQELCLRQLSVDD 669
Query: 324 SGLGSFKPPRSLKLLDLHGGWLLTE 348
+ L L+ L L+ +T+
Sbjct: 670 AFLRDLTCHERLRRLSLNSCTRITD 694
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 137/315 (43%), Gaps = 45/315 (14%)
Query: 77 SVDAEWMAYLGAFRYLRSLNVADCRRVTS----------------------SALWALTGM 114
SVD ++ L LR L++ C R+T L L G+
Sbjct: 879 SVDDAFLRDLTCHERLRRLSLNSCTRITDVSPLARMRSLEMLDLNDCTGIVRGLHELCGL 938
Query: 115 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 174
T L+EL L+ V V DA ++ L L +L L+ D ++ L+ +++L LDL G
Sbjct: 939 TTLQELCLAN-VNVDDAFLRDLTCHERLRELSLNSCTRITD-VSPLARMRSLEKLDLNGC 996
Query: 175 PVTDLVLRSLQVLTKLEYL-DLWGSQVSNRGAAV--LKMFPRLSFLNLA----WTGVTKL 227
++R L VL L L +L+ Q+S A + L RL L+L T V+ L
Sbjct: 997 TG---IVRGLHVLCGLTTLQELYLRQMSVDDALLRDLTCHERLRRLSLNSCTRITDVSPL 1053
Query: 228 PNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 287
+ SLE ++L+ T +V L L L L+ L L Q V DA L L+ + L
Sbjct: 1054 ARMRSLENMDLNGC------TGIVRGLHVLCGLTTLQELYLRQMSVDDAFLRDLTCHERL 1107
Query: 288 IHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLL 346
LSL + + +TDVS L+ + L L + GL +L+ +L+ +
Sbjct: 1108 RKLSLNSCTRITDVS--PLARMRSLEMLDLNGCTGIVRGLHVLCGLTTLQ--ELYLRQMC 1163
Query: 347 TEDAILQFCKMHPRI 361
+DA L+ H R+
Sbjct: 1164 VDDAFLRDLTCHERL 1178
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 122/290 (42%), Gaps = 36/290 (12%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L R L LN+ C + L L G+T L+EL L R + V DA ++ L L +L
Sbjct: 840 LARMRSLEMLNLNGCTGIVR-GLHELCGLTTLQELYL-RQMSVDDAFLRDLTCHERLRRL 897
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
L+ D ++ L+ +++L +LDL L L LT L+ L L V +
Sbjct: 898 SLNSCTRITD-VSPLARMRSLEMLDLNDCTGIVRGLHELCGLTTLQELCLANVNVDDAFL 956
Query: 206 AVLKMFPRLSFLNLA----WTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLN 261
L RL L+L T V+ L + SLE L+L+ T +V L L L
Sbjct: 957 RDLTCHERLRELSLNSCTRITDVSPLARMRSLEKLDLNGC------TGIVRGLHVLCGLT 1010
Query: 262 HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVS------------------- 301
L+ L L Q V DA L L+ + L LSL + + +TDVS
Sbjct: 1011 TLQELYLRQMSVDDALLRDLTCHERLRRLSLNSCTRITDVSPLARMRSLENMDLNGCTGI 1070
Query: 302 ---LHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 348
LH L L+ L L +R + ++ L L+ L L+ +T+
Sbjct: 1071 VRGLHVLCGLTTLQELYLRQMSVDDAFLRDLTCHERLRKLSLNSCTRITD 1120
>gi|413937766|gb|AFW72317.1| hypothetical protein ZEAMMB73_434085 [Zea mays]
Length = 403
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 104/212 (49%), Gaps = 12/212 (5%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N+V AE M L +L++ C ++ L L +T L+ L++ C + D+ +K+
Sbjct: 196 NAVTAEGMRAFANLVNLLNLDLEGCLKI-HGGLIHLKDLTKLESLNMRYCNYIADSDIKY 254
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
L ++ L+ L LS +T G++ + LQ L+ L+L G PVT L ++ L+ L L+L
Sbjct: 255 LTDLTNLKDLQLSCCKITDLGVSYIRGLQKLTHLNLEGCPVTAACLEAISGLSSLVLLNL 314
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSFIQQVGAETDL 250
+ + G + RL LNL + +T L + SLE LNL ++G +
Sbjct: 315 NRCGIYDDGCENFEGLKRLKVLNLGFNYITDACLVHLKELISLESLNLDSC-KIGDD--- 370
Query: 251 VLSLTALQNLNHLERLNLEQTQVSDATLFPLS 282
L+ L+ L L+ L L T+V + L LS
Sbjct: 371 --GLSHLKGLVLLQSLELSDTEVGNNGLQHLS 400
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 145/377 (38%), Gaps = 85/377 (22%)
Query: 2 ERERESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLE 61
E R L+ LC+ CQ + ++ + LP L+ + L+ + + L+
Sbjct: 53 EPGRCPSLMELCVARVCQD---IDRYS----TFAMLPRDLSQQIFNELVNSNRLTEASLQ 105
Query: 62 VFKHNA-EAIELRGENSVDAEWMAYLGAFRY-LRSLNVADCRRVTSSALWALTGMTCLKE 119
VF+ A + I L V WM + + + L S++++ C V S + L + ++
Sbjct: 106 VFRDCALQDIGLGEYPGVKDAWMEVVASQKQSLLSVDIS-CSEVADSGIDLLRDCSSMQS 164
Query: 120 LDLSRCVKVTDAGMK--------------------------------------------- 134
L + C +++++G+
Sbjct: 165 LACNYCDQISESGLGVLSGLSNLSSLSFKRSNAVTAEGMRAFANLVNLLNLDLEGCLKIH 224
Query: 135 ----HLLSISTLEKLWLSETGLTADG-IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK 189
HL ++ LE L + AD I L+ L NL L L +TDL + ++ L K
Sbjct: 225 GGLIHLKDLTKLESLNMRYCNYIADSDIKYLTDLTNLKDLQLSCCKITDLGVSYIRGLQK 284
Query: 190 LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETD 249
L +L+L G V+ AA L+ A +G++ L ++ C I G E
Sbjct: 285 LTHLNLEGCPVT---AACLE----------AISGLSSLVLLNLNRC----GIYDDGCEN- 326
Query: 250 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 309
+ L L+ LNL ++DA L L L L+L + + D L L L
Sbjct: 327 -------FEGLKRLKVLNLGFNYITDACLVHLKELISLESLNLDSCKIGDDGLSHLKGLV 379
Query: 310 KLTNLSIRDAVLTNSGL 326
L +L + D + N+GL
Sbjct: 380 LLQSLELSDTEVGNNGL 396
>gi|149242645|pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 119/223 (53%), Gaps = 19/223 (8%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L+ +VTD +K L +++TLE+L +S
Sbjct: 125 LKNLTNLNRLELSSNTISDISALSGLTSLQQLNFGN--QVTD--LKPLANLTTLERLDIS 180
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 181 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIGT--L 234
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNL 268
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 235 ASLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLEL 289
Query: 269 EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 290 NENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 328
Score = 41.2 bits (95), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +L+
Sbjct: 100 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLN 157
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 158 FGN-QVTDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 208
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 209 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 252
>gi|344170515|emb|CCA82933.1| leucine-rich-repeat type III effector protein (GALA5) [blood
disease bacterium R229]
Length = 533
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 107/267 (40%), Gaps = 27/267 (10%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
EN + E L L +LNV + R+ AL L LD+ + D G++
Sbjct: 245 ENGIGDEGACALATNTKLTALNV-NRNRIGVEGAKALAAGEALTSLDIG-GNDIGDEGVR 302
Query: 135 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 194
L + + L L + T + ADG+ L++ + L+ L + + D R+L T L L
Sbjct: 303 ALAANARLTTLNVERTRVGADGVGALAASKTLTSLRIDSNNIGDAGARALATNTSLTTLH 362
Query: 195 LWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSL 254
+ + +S GA L L+ LNL + G+ + Q A T L+
Sbjct: 363 IESNGISPAGAQALAANTTLTTLNLGYNGIGD------------AGAQAWSANTTLI--- 407
Query: 255 TALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 314
L++ + +SDA L+ K L L + ++ D L++ LT L
Sbjct: 408 ----------SLSVRRNGLSDAGATTLAASKTLTTLDAGDNTIRDAGARALAANRTLTTL 457
Query: 315 SIRDAVLTNSGLGSFKPPRSLKLLDLH 341
+R + N+G + L LDL
Sbjct: 458 DVRSNEIENAGARALAANTGLASLDLR 484
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 119/311 (38%), Gaps = 50/311 (16%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
+ A +A+L +R LNV D +R+ L L LD+S ++ G + L
Sbjct: 153 ITAAGIAHLSHLPLVR-LNVRD-QRIGVEGARLLANHPTLTSLDVSNG-RIGPEGARALA 209
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY----- 192
+ L L +S + A+G L++ + L+ LD+ + D +L TKL
Sbjct: 210 GNTRLTTLSVSHNRIGAEGAKALAASETLTSLDISENGIGDEGACALATNTKLTALNVNR 269
Query: 193 -------------------LDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLP 228
LD+ G+ + + G L RL+ LN+ T GV L
Sbjct: 270 NRIGVEGAKALAAGEALTSLDIGGNDIGDEGVRALAANARLTTLNVERTRVGADGVGALA 329
Query: 229 NISSLECLNL--SFIQQVGAE---TDLVLSL-------------TALQNLNHLERLNLEQ 270
+L L + + I GA T+ L+ AL L LNL
Sbjct: 330 ASKTLTSLRIDSNNIGDAGARALATNTSLTTLHIESNGISPAGAQALAANTTLTTLNLGY 389
Query: 271 TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 330
+ DA S LI LS+R L+D L++ LT L D + ++G +
Sbjct: 390 NGIGDAGAQAWSANTTLISLSVRRNGLSDAGATTLAASKTLTTLDAGDNTIRDAGARALA 449
Query: 331 PPRSLKLLDLH 341
R+L LD+
Sbjct: 450 ANRTLTTLDVR 460
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 6/143 (4%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
++ + AL T L L+L + DAG + + +TL L + GL+ G L++
Sbjct: 368 ISPAGAQALAANTTLTTLNLGYN-GIGDAGAQAWSANTTLISLSVRRNGLSDAGATTLAA 426
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL--- 219
+ L+ LD G + D R+L L LD+ +++ N GA L L+ L+L
Sbjct: 427 SKTLTTLDAGDNTIRDAGARALAANRTLTTLDVRSNEIENAGARALAANTGLASLDLRNN 486
Query: 220 --AWTGVTKLPNISSLECLNLSF 240
GV L +L L +SF
Sbjct: 487 RVTEAGVRALLANRTLSSLGVSF 509
>gi|281352245|gb|EFB27829.1| hypothetical protein PANDA_007655 [Ailuropoda melanoleuca]
Length = 360
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 162/342 (47%), Gaps = 26/342 (7%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC-LKELDLSRCVK 127
+ LRG V D+ + R + LN+ C ++T S ++L+ LK LDL+ CV
Sbjct: 20 LSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVS 79
Query: 128 VTDAGMKHLL-SISTLEKLWLS-ETGLTADGI-ALLSSLQNLSVLDLGGLP-VTDLVLRS 183
+T++ +K + LE L LS +T DGI AL+ + L L L G + D L+
Sbjct: 80 ITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKH 139
Query: 184 LQ-VLTKLEYLDLWG-SQVSNRGAA-VLKMFPRLSFLNLAWTGVTKLPNIS----SLECL 236
+Q +L L+ S++++ G + + RL L L +G + L + S +L C
Sbjct: 140 IQNYCHELVSLNFQSCSRITDEGVVQICRGCHRLQALCL--SGCSNLTDASLTALALNCP 197
Query: 237 NLSFIQQVGAE--TDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTF-KELIHLSL 292
L ++ TD +L A +N + LE+++LE+ ++D+TL LS +L LSL
Sbjct: 198 RLQILEAARCSHLTDAGFTLLA-RNCHDLEKMDLEECILITDSTLVQLSVHCPKLQALSL 256
Query: 293 RNASL-TDVSLHQLSSLS----KLTNLSIRDAVL-TNSGLGSFKPPRSLKLLDLHGGWLL 346
+ L TD + LS+ + +L L + + +L T+ L + R L+ L+L+ +
Sbjct: 257 SHCELITDDGILHLSNSTCGHERLRVLELDNCLLITDVALEHLENCRGLERLELYDCQQV 316
Query: 347 TEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSL 388
T I + P ++V + + P +G +G R +
Sbjct: 317 TRAGIKRMRAQLPHVKVHAYFAPVTPPTAVGGSGQRLCRCCV 358
>gi|29423725|gb|AAO73556.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 104 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 159
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
L+ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 160 NKLS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 213
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 214 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 268
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 269 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 306
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 78 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 135
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ + ++ L L +LE L Q+SD
Sbjct: 136 FGNQV-TDLKPLANLTTLERLDIS--------SNKLSDISVLAKLTNLESLIATNNQISD 186
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 187 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 230
>gi|219821381|gb|ACL37832.1| internalin A [Listeria monocytogenes]
gi|219821384|gb|ACL37834.1| internalin A [Listeria monocytogenes]
Length = 741
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 103 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 158
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
L+ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 159 NKLS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 212
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 213 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 267
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 268 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 305
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 77 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 134
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ + ++ L L +LE L Q+SD
Sbjct: 135 FGNQV-TDLKPLANLTTLERLDIS--------SNKLSDISVLAKLTNLESLIATNNQISD 185
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 186 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 229
>gi|193785516|dbj|BAG50882.1| unnamed protein product [Homo sapiens]
Length = 423
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 161/342 (47%), Gaps = 26/342 (7%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC-LKELDLSRCVK 127
+ LRG V D+ + R + LN+ C ++T S ++L+ LK LDL+ CV
Sbjct: 83 LSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVS 142
Query: 128 VTDAGMKHLL-SISTLEKLWLSETG-LTADGI-ALLSSLQNLSVLDLGGLP-VTDLVLRS 183
+T++ +K + LE L LS +T DGI AL+ + L L L G + D L+
Sbjct: 143 ITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALPLRGCTQLEDEALKH 202
Query: 184 LQ-VLTKLEYLDLWG-SQVSNRGAA-VLKMFPRLSFLNLAWTGVTKLPNIS----SLECL 236
+Q +L L+L S++++ G + + RL L L +G + L + S L C
Sbjct: 203 IQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCL--SGCSNLTDASLTALGLNCP 260
Query: 237 NLSFIQQVGAE--TDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTF-KELIHLSL 292
L ++ TD +L A +N + LE+++LE+ ++D+TL LS +L LSL
Sbjct: 261 RLQILEAARCSHLTDAGFTLLA-RNCHELEKMDLEECILITDSTLIQLSIHCPKLQALSL 319
Query: 293 RNASL-TDVSLHQLSSLS----KLTNLSIRDAVL-TNSGLGSFKPPRSLKLLDLHGGWLL 346
+ L TD + LS+ + +L L + + +L T+ L + R L+ L+L+ +
Sbjct: 320 SHCELITDDGILHLSNSTCGHERLRVLELDNCLLITDVALEHLENCRGLERLELYDCQQV 379
Query: 347 TEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSL 388
T I + P ++V + + P + +G R +
Sbjct: 380 TRAGIKRMRAQLPHVKVHAYFAPVTPPTAVAGSGQRLCRCCV 421
>gi|325111037|ref|YP_004272105.1| hypothetical protein Plabr_4512 [Planctomyces brasiliensis DSM
5305]
gi|324971305|gb|ADY62083.1| hypothetical protein Plabr_4512 [Planctomyces brasiliensis DSM
5305]
Length = 407
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 126/266 (47%), Gaps = 21/266 (7%)
Query: 52 RRLIFPS----LLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSA 107
RR FP LL+VF+ ++L N D + + L F L L +A R +T S
Sbjct: 81 RRAHFPDGSLELLKVFEKQTVIVDLSLSNISD-DSLDSLKDFNRLEVLILAHTR-ITGSR 138
Query: 108 LWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS-LQNL 166
L L+ +T L LDL+ ++ D + L S+ L++L + + L+ DG ALL + + L
Sbjct: 139 LDQLSSITSLHTLDLT-AIEFDDESVPSLASLRQLQRLKVPTSKLSEDGFALLCTRMPFL 197
Query: 167 SVLDLGGL-PVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAWTGV 224
LDL G V + L L + +L L + + + + +L P L +L+L T +
Sbjct: 198 RSLDLSGRRGVANSWLTHLAKMPRLNVLGVSFAKNIDDDAIPLLAGLPALKWLSLEGTSI 257
Query: 225 T-----KLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLF 279
T L N+++L+ L+L+ +T L +L L L++LNL + + F
Sbjct: 258 TGMFPAALGNLTNLDTLSLAHCTFNAPQT-----LESLSKLRSLKQLNLNDCKNITSLKF 312
Query: 280 PLSTFKELIHLSLRNASLTDVSLHQL 305
L L + L+N +LTD L +L
Sbjct: 313 -LRGMSHLEAIGLKNTNLTDAILKEL 337
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 107/237 (45%), Gaps = 29/237 (12%)
Query: 99 DCRRV-----TSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLT 153
DCRR + L T + +L LS ++D + L + LE L L+ T +T
Sbjct: 79 DCRRAHFPDGSLELLKVFEKQTVIVDLSLS---NISDDSLDSLKDFNRLEVLILAHTRIT 135
Query: 154 ADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPR 213
+ LSS+ +L LDL + D + SL L +L+ L + S++S G A+L R
Sbjct: 136 GSRLDQLSSITSLHTLDLTAIEFDDESVPSLASLRQLQRLKVPTSKLSEDGFALLCT--R 193
Query: 214 LSFL---------NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLE 264
+ FL +A + +T L + L L +SF + + + ++ L L L+
Sbjct: 194 MPFLRSLDLSGRRGVANSWLTHLAKMPRLNVLGVSFAKNIDDD-----AIPLLAGLPALK 248
Query: 265 RLNLEQTQVSDATLFP--LSTFKELIHLSLRNASLT-DVSLHQLSSLSKLTNLSIRD 318
L+LE T ++ +FP L L LSL + + +L LS L L L++ D
Sbjct: 249 WLSLEGTSITG--MFPAALGNLTNLDTLSLAHCTFNAPQTLESLSKLRSLKQLNLND 303
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 26/148 (17%)
Query: 77 SVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHL 136
S+ + A LG L +L++A C L +L+ + LK+L+L+ C +T +K L
Sbjct: 256 SITGMFPAALGNLTNLDTLSLAHCTFNAPQTLESLSKLRSLKQLNLNDCKNIT--SLKFL 313
Query: 137 LSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLW 196
+S LE + L T LT D +L+ LQ +L+Y+DL
Sbjct: 314 RGMSHLEAIGLKNTNLT------------------------DAILKELQYCLQLKYVDLT 349
Query: 197 GSQVSNRGAAVLKMFPRLSFLNLAWTGV 224
++ + + L ++L+ T +
Sbjct: 350 RCRIGKETISTISQLKLLQTISLSGTQI 377
>gi|254417119|ref|ZP_05030865.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
PCC 7420]
gi|196176097|gb|EDX71115.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
PCC 7420]
Length = 414
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 118/240 (49%), Gaps = 31/240 (12%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
LR N+ D R L+G+T L+ L L + ++D + L+ ++ L+K+ LS
Sbjct: 80 LRIQNITDIR--------PLSGLTNLRTLYLGSNL-ISD--VSPLVELTNLKKVDLSHNQ 128
Query: 152 LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF 211
+T + LS L NL LDL +T++ L LT LE+LDL +Q++N + L
Sbjct: 129 IT--NVNPLSGLTNLEWLDLSRNQITNV--NPLSELTNLEWLDLGHNQITN--ISPLSGL 182
Query: 212 PRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 271
L FLNL+ +T IS+L +NL + + + + + L L +L R++L
Sbjct: 183 TNLEFLNLSHNQITNFRIISAL--INL---KDIALNNNQITDIYPLAELTNLRRISLNNN 237
Query: 272 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP 331
Q++ T+ PL L L + N +TD+ LS+LTNL R L ++ + +P
Sbjct: 238 QIT--TVRPLVQLTNLESLYIGNNQITDI-----RPLSQLTNL--RQLALNHNQITDIRP 288
>gi|449283159|gb|EMC89851.1| F-box/LRR-repeat protein 2, partial [Columba livia]
Length = 422
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 161/342 (47%), Gaps = 26/342 (7%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC-LKELDLSRCVK 127
+ LRG V D+ + R + LN+ C ++T S ++L+ LK LDL+ CV
Sbjct: 82 LSLRGCLGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVA 141
Query: 128 VTDAGMKHLL-SISTLEKLWLSETG-LTADGI-ALLSSLQNLSVLDLGGLP-VTDLVLRS 183
+T++ +K L LE L LS +T DGI AL+ L L L G + D L+
Sbjct: 142 ITNSSLKGLSEGCRNLEHLNLSWCDQITKDGIEALVKGCSGLKALFLRGCTQLEDEALKH 201
Query: 184 LQV-LTKLEYLDLWG-SQVSNRG-AAVLKMFPRLSFLNLAWTGVTKLPNIS----SLECL 236
+Q +L L+L +Q+S+ G + + RL +L +G + L + S L C
Sbjct: 202 IQNHCHELVILNLQSCTQISDEGIVKICRGCHRLQ--SLCVSGCSNLTDASLTALGLNCP 259
Query: 237 NLSFIQQVGAE--TDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTF-KELIHLSL 292
L ++ TD +L A +N + LE+++LE+ ++D+TL LS +L LSL
Sbjct: 260 RLKILEAARCSHLTDAGFTLLA-RNCHELEKMDLEECVLITDSTLIQLSIHCPKLQALSL 318
Query: 293 RNASL-TDVSLHQLSSLS----KLTNLSIRDAVL-TNSGLGSFKPPRSLKLLDLHGGWLL 346
+ L TD + LS+ + +L L + + +L T+ L + +L+ ++L+ +
Sbjct: 319 SHCELITDDGILHLSNSTCGHERLQVLELDNCLLITDVTLEHLENCHNLERIELYDCQQV 378
Query: 347 TEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSL 388
T I + P ++V + + P +G +G R +
Sbjct: 379 TRAGIKRIRAHLPHVKVHAYFAPVTPPPSVGGSGQRLCRCCI 420
>gi|293349515|ref|XP_001076670.2| PREDICTED: F-box/LRR-repeat protein 2 [Rattus norvegicus]
gi|293361398|ref|XP_343496.4| PREDICTED: F-box/LRR-repeat protein 2 [Rattus norvegicus]
gi|149018357|gb|EDL76998.1| similar to F-box and leucine-rich repeat protein 2 (predicted),
isoform CRA_b [Rattus norvegicus]
Length = 423
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 163/342 (47%), Gaps = 26/342 (7%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC-LKELDLSRCVK 127
+ LRG V D+ + R + LN+ C ++T S ++L+ LK LDL+ CV
Sbjct: 83 LSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVS 142
Query: 128 VTDAGMKHLL-SISTLEKLWLSETG-LTADGI-ALLSSLQNLSVLDLGGLP-VTDLVLRS 183
VT++ +K + LE L LS +T +GI AL+ + L L L G + D L+
Sbjct: 143 VTNSSLKGISEGCRNLEYLNLSWCDQITKEGIEALVRGCRGLKALLLRGCTQLEDEALKH 202
Query: 184 LQV-LTKLEYLDLWG-SQVSNRGAA-VLKMFPRLSFLNLAWTGVTKLPNIS----SLECL 236
+Q +L L+L S++++ G + + RL L L +G + L + S L C
Sbjct: 203 IQNHCHELVSLNLQSCSRITDDGVVQICRGCHRLQALCL--SGCSNLTDASLTALGLNCP 260
Query: 237 NLSFIQQVGAE--TDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTF-KELIHLSL 292
L ++ TD +L A +N + LE+++LE+ ++D+TL LS +L LSL
Sbjct: 261 RLQVLEAARCSHLTDAGFTLLA-RNCHDLEKMDLEECVLITDSTLIQLSIHCPKLQALSL 319
Query: 293 RNASL-TDVSLHQLSSLS----KLTNLSIRDAVL-TNSGLGSFKPPRSLKLLDLHGGWLL 346
+ L TD + LSS + +L L + + +L T++ L + R L+ L+L+ +
Sbjct: 320 SHCELITDEGILHLSSSTCGHERLRVLELDNCLLVTDASLEHLENCRGLERLELYDCQQV 379
Query: 347 TEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSL 388
T I + PR++V + + P + +G R +
Sbjct: 380 TRAGIKRMRAQLPRVKVHAYFAPVTPPPAVAGSGHRLCRCCV 421
>gi|85679240|gb|ABC72036.1| InlA [Listeria monocytogenes]
Length = 794
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 215
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
L+ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 NKLS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 269
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 270 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 324
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 325 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 362
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 134 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 191
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ + ++ L L +LE L Q+SD
Sbjct: 192 FGNQV-TDLKPLANLTTLERLDIS--------SNKLSDISVLAKLTNLESLIATNNQISD 242
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 243 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 286
>gi|85679238|gb|ABC72035.1| InlA [Listeria monocytogenes]
Length = 791
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 120/226 (53%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ A + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 156 IDALKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERL 211
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 212 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 266
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++ + + +++ L L L
Sbjct: 267 -TLASLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTN 320
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 321 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 362
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 88/168 (52%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I+ L++L NL+ L L +TD+ +L+ LT L L+L + +S+ A + L +LS
Sbjct: 134 ISPLANLTNLTGLTLFNNQITDI--DALKNLTNLNRLELSSNTISDISALSGLTNLQQLS 191
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 192 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 242
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 243 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 286
>gi|22347568|gb|AAM95929.1| internalin A precursor [Listeria monocytogenes]
Length = 743
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 105 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 160
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
L+ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 161 NKLS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 214
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 215 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 269
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 270 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 307
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 79 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 136
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ + ++ L L +LE L Q+SD
Sbjct: 137 FGNQV-TDLKPLANLTTLERLDIS--------SNKLSDISVLAKLTNLESLIATNNQISD 187
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 188 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 231
>gi|386333502|ref|YP_006029672.1| type III effector gala6 protein [Ralstonia solanacearum Po82]
gi|334195951|gb|AEG69136.1| type III effector gala6 protein [Ralstonia solanacearum Po82]
Length = 535
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 128/314 (40%), Gaps = 48/314 (15%)
Query: 73 RGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCV------ 126
RG + A +A+L +R LN++ R T A L L ELD+SRC
Sbjct: 150 RGRGFITAAGIAHLSRLPLVR-LNLSGNRIGTVEARL-LANHPTLTELDVSRCGIGPEEA 207
Query: 127 -----------------KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVL 169
V G++ L+ TL L LSE GL L + + L++L
Sbjct: 208 RALAASARLTTLNASRNGVGGEGVRALVDCKTLTSLDLSENGLGDAEAQRLGASERLTML 267
Query: 170 DLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
++ + R+L L LD+ G+ + + G L +L+ LN+ GV
Sbjct: 268 NVNRNRIDVPGARALAACKTLTSLDIGGNSIGDAGVEALLAHTQLTTLNVERAGVGAHGV 327
Query: 230 ISSLECLNLSFIQ----QVGAETDLVL----SLTALQNLNH---------------LERL 266
+ +C L+ ++ +G E L SLTAL + ++ L L
Sbjct: 328 RALADCKTLTSLRIDNNNIGDEGAKTLAASTSLTALHSESNGIGLAGAKALAANTMLTTL 387
Query: 267 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 326
NL V DA +L+ LS+R L+D +L++ LT L + D + ++G
Sbjct: 388 NLGHNSVGDAGAQAWLANTKLVSLSVRRNGLSDAGAIRLAASKTLTTLDVGDNAIKDTGA 447
Query: 327 GSFKPPRSLKLLDL 340
+F R+L L+L
Sbjct: 448 RAFAANRTLTTLNL 461
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%)
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
V DAG + L+ + L L + GL+ G L++ + L+ LD+G + D R+
Sbjct: 394 VGDAGAQAWLANTKLVSLSVRRNGLSDAGAIRLAASKTLTTLDVGDNAIKDTGARAFAAN 453
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL 219
L L+L +++ N GA L RL+ L+L
Sbjct: 454 RTLTTLNLSSNEIGNAGARALAANTRLASLDL 485
>gi|296209865|ref|XP_002751719.1| PREDICTED: F-box/LRR-repeat protein 13 [Callithrix jacchus]
Length = 825
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 135/286 (47%), Gaps = 21/286 (7%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLK--ELDLSRCVKVTDAGMKHLL-SISTLEK 144
F L++L++A CRR T L L G C K LDLS C +++ G +++ S + +
Sbjct: 385 FHNLQNLSLAYCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGILH 444
Query: 145 LWLSETGLTADGI--ALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQ-V 200
L +++ D AL+ +++ + G P ++D ++L KL + G++ +
Sbjct: 445 LIINDMPTLTDNCVKALVEKCSHITSMIFTGAPHISDCTFKALST-CKLRKIRFEGNKRI 503
Query: 201 SNRGAAVL-KMFPRLSFLNLA-WTGVTK-----LPNISSLECLNLSFIQQVGAETDLVLS 253
++ + K +P LS + +A G+T L + L LNL+ ++G + L
Sbjct: 504 TDASFKFMDKNYPDLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIG-DVGLRQF 562
Query: 254 LTALQNLNHLERLNLEQ-TQVSDATLFPLST-FKELIHLSLRNAS-LTDVSLHQLSSLSK 310
L ++ + LNL Q+SD ++ LS L +LSLRN LT + + ++
Sbjct: 563 LDGPASI-RIRELNLSNCVQLSDVSVLKLSERCPNLNYLSLRNCEHLTAQGIAYIVNIFS 621
Query: 311 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 356
L ++ + ++N L + LK L + + +T+D I FCK
Sbjct: 622 LVSIDLSGTDISNEDLNVLSRHKKLKELSVSACYRITDDGIQAFCK 667
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 114/254 (44%), Gaps = 55/254 (21%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV 128
I G + DA + + L + +ADC+ +T S+L +L+ + L L+L+ CV++
Sbjct: 495 IRFEGNKRITDASFKFMDKNYPDLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRI 554
Query: 129 TDAGMKHLLS-----------------ISTLEKLWLSE-------------TGLTADGIA 158
D G++ L +S + L LSE LTA GIA
Sbjct: 555 GDVGLRQFLDGPASIRIRELNLSNCVQLSDVSVLKLSERCPNLNYLSLRNCEHLTAQGIA 614
Query: 159 LLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS-QVSNRGAAVLKMFPRLSFL 217
+ ++ +L +DL G +++ L L KL+ L + ++++ G ++ F + S +
Sbjct: 615 YIVNIFSLVSIDLSGTDISNEDLNVLSRHKKLKELSVSACYRITDDG---IQAFCKNSLI 671
Query: 218 NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDA 276
LECL++S+ Q+ +D+++ A+ +N L L++ +++D+
Sbjct: 672 ---------------LECLDVSYCSQL---SDMIIKALAIYCIN-LTSLSIAGCPKITDS 712
Query: 277 TLFPLSTFKELIHL 290
+ LS +H+
Sbjct: 713 VMEMLSAKCHYLHI 726
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 118/251 (47%), Gaps = 38/251 (15%)
Query: 117 LKELDLSRCVKVTDAGMKHLL-SISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 171
L+EL++S C TD M+H+ + L LS T +T + LL +LQNLS+
Sbjct: 337 LQELNVSDCPTFTDESMRHISEGCPGVLYLNLSNTTITNRTMRLLPRHFHNLQNLSLAYC 396
Query: 172 GGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWTG---- 223
TD L+ L + KL YLDL G +Q+S +G ++ + TG
Sbjct: 397 RRF--TDKGLQYLNLGNGCHKLIYLDLSGCTQISVQG---------FRYIANSCTGILHL 445
Query: 224 -VTKLPNISS-------LECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE-QTQVS 274
+ +P ++ +C +++ + GA + AL L ++ E +++
Sbjct: 446 IINDMPTLTDNCVKALVEKCSHITSMIFTGAPHISDCTFKALSTCK-LRKIRFEGNKRIT 504
Query: 275 DATL-FPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSF-K 330
DA+ F + +L H+ + + +TD SL LS L +LT L++ + V + + GL F
Sbjct: 505 DASFKFMDKNYPDLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDVGLRQFLD 564
Query: 331 PPRSLKLLDLH 341
P S+++ +L+
Sbjct: 565 GPASIRIRELN 575
>gi|149175637|ref|ZP_01854257.1| putative serine/threonine-protein kinase [Planctomyces maris DSM
8797]
gi|148845622|gb|EDL59965.1| putative serine/threonine-protein kinase [Planctomyces maris DSM
8797]
Length = 718
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 80/150 (53%), Gaps = 3/150 (2%)
Query: 77 SVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHL 136
++ E MA L L +L++ DC V AL L G LK LDL +T+AG+ H+
Sbjct: 552 TITREVMAPLKGLAKLETLHLEDCH-VMDDALAPLEGKLTLKTLDLHE-TGLTNAGLSHI 609
Query: 137 LSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
S+ L L L + +T +G+ L++L+ LS ++L L +TD + ++ +L++L++
Sbjct: 610 SSLLNLTHLSLQKNREITDEGLQALANLKKLSSINLDRLNITDEGITFIKHNPRLDWLNI 669
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 225
+Q+S+ +L R+ L L + +T
Sbjct: 670 KDTQISDTSIPLLIKLNRMKNLYLEGSKIT 699
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 89/218 (40%), Gaps = 52/218 (23%)
Query: 91 YLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET 150
Y+R + + +T + L G+ L+ L L C V D + L TL+ L L ET
Sbjct: 542 YIREIKFHP-QTITREVMAPLKGLAKLETLHLEDC-HVMDDALAPLEGKLTLKTLDLHET 599
Query: 151 GLTADGIALLSSLQNLSVLDL-GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
GLT G++ +SSL NL+ L L +TD L++L L KL ++L +++ G +K
Sbjct: 600 GLTNAGLSHISSLLNLTHLSLQKNREITDEGLQALANLKKLSSINLDRLNITDEGITFIK 659
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
PR L W LN++
Sbjct: 660 HNPR-----LDW--------------------------------------------LNIK 670
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 307
TQ+SD ++ L + +L L + +TD + ++ +
Sbjct: 671 DTQISDTSIPLLIKLNRMKNLYLEGSKITDQGIQKIKN 708
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Query: 254 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 313
+ L+ L LE L+LE V D L PL L L L LT+ L +SSL LT+
Sbjct: 558 MAPLKGLAKLETLHLEDCHVMDDALAPLEGKLTLKTLDLHETGLTNAGLSHISSLLNLTH 617
Query: 314 LSI-RDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIE 362
LS+ ++ +T+ GL + + L ++L L D + F K +PR++
Sbjct: 618 LSLQKNREITDEGLQALANLKKLSSINL--DRLNITDEGITFIKHNPRLD 665
>gi|223698664|gb|ACN19016.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 119/226 (52%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 72 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 127
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 128 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 182
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++ + + +++ L L L
Sbjct: 183 -TLASLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTN 236
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 237 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 278
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TDL L+ LT L L+L + +S+ A + L +LS
Sbjct: 50 ITPLANLTNLTGLTLFNNQITDL--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 107
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 108 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 158
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 159 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 202
>gi|195150157|ref|XP_002016021.1| GL10712 [Drosophila persimilis]
gi|194109868|gb|EDW31911.1| GL10712 [Drosophila persimilis]
Length = 529
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 87/186 (46%), Gaps = 57/186 (30%)
Query: 92 LRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL----- 145
L L + DC+R++ AL + G+T LK ++LS CV VTD+G+KHL + LE+L
Sbjct: 339 LEHLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDSGLKHLARMPKLEQLNLRSC 398
Query: 146 ---------WLSETG--------------------------------------LTADG-I 157
+L+E G +T G +
Sbjct: 399 DNISDIGMAYLTEGGSGINSLDVSFCDKISDQALTHIAQGLYRLRSLSLNQCQITDQGMV 458
Query: 158 ALLSSLQNLSVLDLGGLP-VTDLVLRSL-QVLTKLEYLDLWG-SQVSNRGAAVLKMFPRL 214
+ SLQ L L++G +TD L++L + LT L+ +DL+G +Q+S++G ++ P+L
Sbjct: 459 KIAKSLQELENLNIGQCSRITDKGLQTLAEDLTNLKTIDLYGCTQLSSKGIDIIMKLPKL 518
Query: 215 SFLNLA 220
LNL
Sbjct: 519 QKLNLG 524
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 113/250 (45%), Gaps = 49/250 (19%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSIS------- 140
R L +L + C +T++ L + G+ L+ L+L C ++D G+ HL S
Sbjct: 277 LRNLENLELGGCCNITNTGLLLIAWGLKKLRHLNLRSCWHISDQGIGHLAGFSRETAEGN 336
Query: 141 -TLEKLWLSET--------GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLE 191
LE L L + G A G+ L S+ NLS + VTD L+ L + KLE
Sbjct: 337 LQLEHLGLQDCQRLSDEALGHIAQGLTSLKSI-NLSFC----VSVTDSGLKHLARMPKLE 391
Query: 192 YLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDL 250
L+L +S+ G A +L +G+ L++SF ++ +D
Sbjct: 392 QLNLRSCDNISDIGMA---------YLTEGGSGINS---------LDVSFCDKI---SDQ 430
Query: 251 VLSLTALQNLNHLERLNLEQTQVSDATLFPLS-TFKELIHLSLRNAS-LTDVSLHQLSSL 308
L+ A Q L L L+L Q Q++D + ++ + +EL +L++ S +TD L L+
Sbjct: 431 ALTHIA-QGLYRLRSLSLNQCQITDQGMVKIAKSLQELENLNIGQCSRITDKGLQTLA-- 487
Query: 309 SKLTNLSIRD 318
LTNL D
Sbjct: 488 EDLTNLKTID 497
>gi|167861924|gb|ACA05661.1| InlA [Listeria monocytogenes]
Length = 800
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
LS L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLSDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 93/189 (49%), Gaps = 22/189 (11%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSL 335
T PL L LSL L D+ +L+ LTNLS D L N+ + + P L
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDI-----GTLASLTNLSDLD--LANNQISNLAPLSGL 294
Query: 336 -KLLDLHGG 343
KL +L G
Sbjct: 295 TKLTELKLG 303
>gi|198456933|ref|XP_001360491.2| GA22149 [Drosophila pseudoobscura pseudoobscura]
gi|198135799|gb|EAL25066.2| GA22149 [Drosophila pseudoobscura pseudoobscura]
Length = 529
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 87/186 (46%), Gaps = 57/186 (30%)
Query: 92 LRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL----- 145
L L + DC+R++ AL + G+T LK ++LS CV VTD+G+KHL + LE+L
Sbjct: 339 LEHLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDSGLKHLARMPKLEQLNLRSC 398
Query: 146 ---------WLSETG--------------------------------------LTADG-I 157
+L+E G +T G +
Sbjct: 399 DNISDIGMAYLTEGGSGINSLDVSFCDKISDQALTHIAQGLYRLRSLSLNQCQITDQGMV 458
Query: 158 ALLSSLQNLSVLDLGGLP-VTDLVLRSL-QVLTKLEYLDLWG-SQVSNRGAAVLKMFPRL 214
+ SLQ L L++G +TD L++L + LT L+ +DL+G +Q+S++G ++ P+L
Sbjct: 459 KIAKSLQELENLNIGQCSRITDKGLQTLAEDLTNLKTIDLYGCTQLSSKGIDIIMKLPKL 518
Query: 215 SFLNLA 220
LNL
Sbjct: 519 QKLNLG 524
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 113/250 (45%), Gaps = 49/250 (19%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSIS------- 140
R L +L + C +T++ L + G+ L+ L+L C ++D G+ HL S
Sbjct: 277 LRNLENLELGGCCNITNTGLLLIAWGLKKLRHLNLRSCWHISDQGIGHLAGFSRETAEGN 336
Query: 141 -TLEKLWLSET--------GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLE 191
LE L L + G A G+ L S+ NLS + VTD L+ L + KLE
Sbjct: 337 LQLEHLGLQDCQRLSDEALGHIAQGLTSLKSI-NLSFC----VSVTDSGLKHLARMPKLE 391
Query: 192 YLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDL 250
L+L +S+ G A +L +G+ L++SF ++ +D
Sbjct: 392 QLNLRSCDNISDIGMA---------YLTEGGSGINS---------LDVSFCDKI---SDQ 430
Query: 251 VLSLTALQNLNHLERLNLEQTQVSDATLFPLS-TFKELIHLSLRNAS-LTDVSLHQLSSL 308
L+ A Q L L L+L Q Q++D + ++ + +EL +L++ S +TD L L+
Sbjct: 431 ALTHIA-QGLYRLRSLSLNQCQITDQGMVKIAKSLQELENLNIGQCSRITDKGLQTLA-- 487
Query: 309 SKLTNLSIRD 318
LTNL D
Sbjct: 488 EDLTNLKTID 497
>gi|290993162|ref|XP_002679202.1| predicted protein [Naegleria gruberi]
gi|284092818|gb|EFC46458.1| predicted protein [Naegleria gruberi]
Length = 345
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 117/269 (43%), Gaps = 7/269 (2%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
+N V +E Y+ + L SL++ D + + L+ + L L++S V G K
Sbjct: 78 QNQVGSEGCKYISELKQLTSLSI-DENFIYDEGVEYLSELAQLTYLNISNN-GVGSEGCK 135
Query: 135 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 194
++ + L L + +G +S+L L LD+ + D L + L++L LD
Sbjct: 136 YVGKMKRLTSLGFYNNRIGKEGAKYISTLNQLKQLDISRTNIGDKGLEHIGQLSQLTSLD 195
Query: 195 LWGSQVSNRGAAVLKMFPRLSFLNLAWT--GVTKLPNISSLECLNLSFIQQVGAETDLVL 252
L+ +++ N GA L +L++LN++ G + I L+ L I D V
Sbjct: 196 LYCNKIGNGGAKYLSELKQLTYLNISENHIGNEGIKYIGELKQLVNLIINNNRIGNDGVK 255
Query: 253 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 312
+ L+ L + LN+ + ++ + + + K+L ++ + + + LS+LT
Sbjct: 256 YIGELKQLTY---LNISENRIGNEGIKYIGDLKQLTNIIISRNWIGSEGAKYIGKLSQLT 312
Query: 313 NLSIRDAVLTNSGLGSFKPPRSLKLLDLH 341
+L + + N G + L L++
Sbjct: 313 SLGLSSNNIDNEGAKYLSELKELSFLNIE 341
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 102/229 (44%), Gaps = 11/229 (4%)
Query: 127 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 186
+V G K++ + L L + E + +G+ LS L L+ L++ V + +
Sbjct: 80 QVGSEGCKYISELKQLTSLSIDENFIYDEGVEYLSELAQLTYLNISNNGVGSEGCKYVGK 139
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSFI 241
+ +L L + +++ GA + +L L+++ T G+ + +S L L+L +
Sbjct: 140 MKRLTSLGFYNNRIGKEGAKYISTLNQLKQLDISRTNIGDKGLEHIGQLSQLTSLDL-YC 198
Query: 242 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 301
++G LS L L LN+ + + + + + K+L++L + N + +
Sbjct: 199 NKIGNGGAKYLS-----ELKQLTYLNISENHIGNEGIKYIGELKQLVNLIINNNRIGNDG 253
Query: 302 LHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 350
+ + L +LT L+I + + N G+ + L + + W+ +E A
Sbjct: 254 VKYIGELKQLTYLNISENRIGNEGIKYIGDLKQLTNIIISRNWIGSEGA 302
>gi|430743420|ref|YP_007202549.1| hypothetical protein Sinac_2547 [Singulisphaera acidiphila DSM
18658]
gi|430015140|gb|AGA26854.1| hypothetical protein Sinac_2547 [Singulisphaera acidiphila DSM
18658]
Length = 356
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 110/249 (44%), Gaps = 28/249 (11%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
M+++G L L+ ++T++ L L +T L+ +DLS VT G+ HL +++L
Sbjct: 125 MSHVGRLSQLEELDATGGSKLTNAGLVHLQSLTRLRMVDLSLLPGVTGKGLIHLAELTSL 184
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDLWGSQVS 201
E+L LS AD + L + GG +TD L +L+ LT+L L L SQV+
Sbjct: 185 ERLNLSSPVADADLVNLSRLTNLRLLRLNGGGNGITDEGLANLKGLTELRELILRNSQVT 244
Query: 202 NRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLN 261
G L+ ++ L KL N S LE L LQ +
Sbjct: 245 GTGLTALQGMIAMADL--------KLIN-SHLETLE------------------PLQRMT 277
Query: 262 HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVL 321
L+ L + ++ + D L + K L +LSL + +TD L L L L + R +
Sbjct: 278 GLKSLWIHRSPLDDRGLKHVENLKSLQYLSLEDTRITDDGLKSLLDLRGLREVDARGTGV 337
Query: 322 TNSGLGSFK 330
T G +F+
Sbjct: 338 TIMGSATFQ 346
>gi|223698901|gb|ACN19174.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 119/226 (52%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 72 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 127
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 128 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 182
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++ + + +++ L L L
Sbjct: 183 -TLASLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTN 236
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 237 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 278
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TDL L+ LT L L+L + +S+ A + L +LS
Sbjct: 50 ITPLANLTNLTGLTLFNNQITDL--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 107
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 108 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 158
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 159 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 202
>gi|223698607|gb|ACN18978.1| internalin A [Listeria monocytogenes]
gi|223698703|gb|ACN19042.1| internalin A [Listeria monocytogenes]
gi|223698760|gb|ACN19080.1| internalin A [Listeria monocytogenes]
gi|223698907|gb|ACN19178.1| internalin A [Listeria monocytogenes]
gi|223698910|gb|ACN19180.1| internalin A [Listeria monocytogenes]
gi|223698916|gb|ACN19184.1| internalin A [Listeria monocytogenes]
gi|223698919|gb|ACN19186.1| internalin A [Listeria monocytogenes]
gi|223698964|gb|ACN19216.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 119/226 (52%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 72 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 127
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 128 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 182
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++ + + +++ L L L
Sbjct: 183 -TLASLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTN 236
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 237 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 278
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TDL L+ LT L L+L + +S+ A + L +LS
Sbjct: 50 ITPLANLTNLTGLTLFNNQITDL--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 107
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 108 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 158
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 159 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 202
>gi|223698655|gb|ACN19010.1| internalin A [Listeria monocytogenes]
gi|223698913|gb|ACN19182.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 119/226 (52%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 72 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 127
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 128 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 182
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++ + + +++ L L L
Sbjct: 183 -TLASLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTN 236
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 237 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 278
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TDL L+ LT L L+L + +S+ A + L +LS
Sbjct: 50 ITPLANLTNLTGLTLFNNQITDL--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 107
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 108 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 158
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 159 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 202
>gi|149018356|gb|EDL76997.1| similar to F-box and leucine-rich repeat protein 2 (predicted),
isoform CRA_a [Rattus norvegicus]
Length = 466
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 163/342 (47%), Gaps = 26/342 (7%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC-LKELDLSRCVK 127
+ LRG V D+ + R + LN+ C ++T S ++L+ LK LDL+ CV
Sbjct: 126 LSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVS 185
Query: 128 VTDAGMKHLL-SISTLEKLWLSETG-LTADGI-ALLSSLQNLSVLDLGGLP-VTDLVLRS 183
VT++ +K + LE L LS +T +GI AL+ + L L L G + D L+
Sbjct: 186 VTNSSLKGISEGCRNLEYLNLSWCDQITKEGIEALVRGCRGLKALLLRGCTQLEDEALKH 245
Query: 184 LQV-LTKLEYLDLWG-SQVSNRGAA-VLKMFPRLSFLNLAWTGVTKLPNIS----SLECL 236
+Q +L L+L S++++ G + + RL L L +G + L + S L C
Sbjct: 246 IQNHCHELVSLNLQSCSRITDDGVVQICRGCHRLQALCL--SGCSNLTDASLTALGLNCP 303
Query: 237 NLSFIQQVGAE--TDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTF-KELIHLSL 292
L ++ TD +L A +N + LE+++LE+ ++D+TL LS +L LSL
Sbjct: 304 RLQVLEAARCSHLTDAGFTLLA-RNCHDLEKMDLEECVLITDSTLIQLSIHCPKLQALSL 362
Query: 293 RNASL-TDVSLHQLSSLS----KLTNLSIRDAVL-TNSGLGSFKPPRSLKLLDLHGGWLL 346
+ L TD + LSS + +L L + + +L T++ L + R L+ L+L+ +
Sbjct: 363 SHCELITDEGILHLSSSTCGHERLRVLELDNCLLVTDASLEHLENCRGLERLELYDCQQV 422
Query: 347 TEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSL 388
T I + PR++V + + P + +G R +
Sbjct: 423 TRAGIKRMRAQLPRVKVHAYFAPVTPPPAVAGSGHRLCRCCV 464
>gi|223698868|gb|ACN19152.1| internalin A [Listeria monocytogenes]
gi|223698898|gb|ACN19172.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 119/226 (52%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 72 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 127
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 128 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 182
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++ + + +++ L L L
Sbjct: 183 -TLASLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTN 236
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 237 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 278
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TDL L+ LT L L+L + +S+ A + L +LS
Sbjct: 50 ITPLANLTNLTGLTLFNNQITDL--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 107
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 108 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 158
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 159 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 202
>gi|223698643|gb|ACN19002.1| internalin A [Listeria monocytogenes]
gi|223698646|gb|ACN19004.1| internalin A [Listeria monocytogenes]
gi|223698670|gb|ACN19020.1| internalin A [Listeria monocytogenes]
gi|223698673|gb|ACN19022.1| internalin A [Listeria monocytogenes]
gi|223698718|gb|ACN19052.1| internalin A [Listeria monocytogenes]
gi|223698754|gb|ACN19076.1| internalin A [Listeria monocytogenes]
gi|223698757|gb|ACN19078.1| internalin A [Listeria monocytogenes]
gi|223698796|gb|ACN19104.1| internalin A [Listeria monocytogenes]
gi|223698826|gb|ACN19124.1| internalin A [Listeria monocytogenes]
gi|223698829|gb|ACN19126.1| internalin A [Listeria monocytogenes]
gi|223698832|gb|ACN19128.1| internalin A [Listeria monocytogenes]
gi|223698862|gb|ACN19148.1| internalin A [Listeria monocytogenes]
gi|223698895|gb|ACN19170.1| internalin A [Listeria monocytogenes]
gi|223698925|gb|ACN19190.1| internalin A [Listeria monocytogenes]
gi|223698928|gb|ACN19192.1| internalin A [Listeria monocytogenes]
gi|223698931|gb|ACN19194.1| internalin A [Listeria monocytogenes]
gi|223698934|gb|ACN19196.1| internalin A [Listeria monocytogenes]
gi|223698937|gb|ACN19198.1| internalin A [Listeria monocytogenes]
gi|223698940|gb|ACN19200.1| internalin A [Listeria monocytogenes]
gi|223698943|gb|ACN19202.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 121/226 (53%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 72 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 127
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 128 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 182
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++GA + + +++ L L L
Sbjct: 183 -TLASLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTN 236
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 237 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 278
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TDL L+ LT L L+L + +S+ A + L +LS
Sbjct: 50 ITPLANLTNLTGLTLFNNQITDL--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 107
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 108 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 158
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 159 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 202
>gi|38154344|gb|AAR12159.1| internalin A [Listeria monocytogenes]
Length = 685
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 119/226 (52%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 101 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 156
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 157 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 211
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++ + + +++ L L L
Sbjct: 212 -TLASLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTN 265
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 266 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 307
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TDL L+ LT L L+L + +S+ A + L +LS
Sbjct: 79 ITPLANLTNLTGLTLFNNQITDL--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 136
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 137 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 187
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 188 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 231
>gi|223698835|gb|ACN19130.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 119/226 (52%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 72 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 127
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 128 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 182
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++ + + +++ L L L
Sbjct: 183 -TLASLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTN 236
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 237 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 278
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TDL L+ LT L L+L + +S+ A + L +LS
Sbjct: 50 ITPLANLTNLTGLTLFNNQITDL--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 107
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 108 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 158
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 159 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 202
>gi|397630643|gb|EJK69852.1| hypothetical protein THAOC_08850 [Thalassiosira oceanica]
Length = 859
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 98/220 (44%), Gaps = 27/220 (12%)
Query: 83 MAYLGAFRYLRSLNV--------ADCRRVTSSALWALTG-MTCLKELDLSRCVKVTDAGM 133
+ +LG L+ L+V +VT L + G M L+EL + ++V+ G+
Sbjct: 229 LTFLGNLDRLKKLSVDGMLNSRGKSTPQVTDETLGIIAGEMHSLRELIIGVDMEVSGIGL 288
Query: 134 KHLLSISTLEKLWLSE---TGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTK 189
HL + LE L L G+T +G+ +L SL L L + ++D L LQ L +
Sbjct: 289 VHLAEMGRLESLSLERGAGEGITDNGLKVLCSLGRLRSLRITHCAYLSDRSLNYLQHLHR 348
Query: 190 LEYLDLW---GSQVSNRGAAVLKMFPRLSFLNL-AWT-----GVTKLPNISSLECLNLSF 240
+E L+L S ++ GA L L L+L W GV L IS+LECLNL +
Sbjct: 349 IEKLELSCVDDSSFTDEGARQLSKLKNLKELSLVGWERLTDRGVYYLSKISTLECLNLRY 408
Query: 241 IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFP 280
+ E SL L+ L L +L L A + P
Sbjct: 409 CPSITDE-----SLEHLRYLKGLRKLELSDCDARPADVHP 443
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 65 HNAEAIELR--GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDL 122
H E +EL ++S E L + L+ L++ R+T ++ L+ ++ L+ L+L
Sbjct: 347 HRIEKLELSCVDDSSFTDEGARQLSKLKNLKELSLVGWERLTDRGVYYLSKISTLECLNL 406
Query: 123 SRCVKVTDAGMKHLLSISTLEKLWLSE 149
C +TD ++HL + L KL LS+
Sbjct: 407 RYCPSITDESLEHLRYLKGLRKLELSD 433
>gi|38154342|gb|AAR12158.1| internalin A [Listeria monocytogenes]
Length = 728
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 121/226 (53%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 101 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 156
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 157 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 211
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++GA + + +++ L L L
Sbjct: 212 -TLASLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTN 265
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 266 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 307
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TDL L+ LT L L+L + +S+ A + L +LS
Sbjct: 79 ITPLANLTNLTGLTLFNNQITDL--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 136
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 137 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 187
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 188 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 231
>gi|223698976|gb|ACN19224.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 119/226 (52%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 72 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 127
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 128 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 182
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++ + + +++ L L L
Sbjct: 183 -TLASLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTN 236
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 237 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 278
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TDL L+ LT L L+L + +S+ A + L +LS
Sbjct: 50 ITPLANLTNLTGLTLFNNQITDL--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 107
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 108 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 158
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 159 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 202
>gi|223698658|gb|ACN19012.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 119/226 (52%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 72 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 127
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 128 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 182
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++ + + +++ L L L
Sbjct: 183 -TLASLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTN 236
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 237 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 278
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TDL L+ LT L L+L + +S+ A + L +LS
Sbjct: 50 ITPLANLTNLTGLTLFNNQITDL--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 107
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 108 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 158
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 159 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 202
>gi|441470006|emb|CCQ19761.1| Internalin-A [Listeria monocytogenes]
Length = 489
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 119/226 (52%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIGT 268
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++ + + +++ L L L
Sbjct: 269 --LASLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTN 321
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 322 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TDL L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDL--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|223698886|gb|ACN19164.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 121/226 (53%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 72 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 127
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 128 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 182
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++GA + + +++ L L L
Sbjct: 183 -TLASLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTN 236
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 237 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 278
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TDL L+ LT L L+L + +S+ A + L +LS
Sbjct: 50 ITPLANLTNLTGLTLFNNQITDL--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 107
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 108 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 158
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 159 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 202
>gi|195121256|ref|XP_002005136.1| GI19235 [Drosophila mojavensis]
gi|193910204|gb|EDW09071.1| GI19235 [Drosophila mojavensis]
Length = 545
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 98/184 (53%), Gaps = 14/184 (7%)
Query: 92 LRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET 150
L L + DC+R++ AL + G+T LK ++LS CV VTD+G+KHL + LE+L L
Sbjct: 355 LEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDSGLKHLARMPKLEQLNLRSC 414
Query: 151 GLTAD-GIALLS-SLQNLSVLDLGGL-PVTDLVLRSL-QVLTKLEYLDLWGSQVSNRGA- 205
+D G+A L+ ++ LD+ ++D L + Q L +L L L Q++++G
Sbjct: 415 DNISDIGMAYLTEGGSGINSLDVSFCDKISDQALTHIAQGLYRLRSLSLNQCQITDQGML 474
Query: 206 AVLKMFPRLSFLNLAWT------GVTKLP-NISSLECLNLSFIQQVGAE-TDLVLSLTAL 257
+ K L LN+ G+ L ++S+L+ ++L Q+ ++ D+++ L L
Sbjct: 475 KIAKSLHELENLNIGQCSRITDKGLQTLAEDLSNLKTIDLYGCTQLSSKGIDIIMKLPKL 534
Query: 258 QNLN 261
Q LN
Sbjct: 535 QKLN 538
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 126/280 (45%), Gaps = 50/280 (17%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSIS------- 140
+ L +L + C +T++ L + G+ L+ L+L C ++D G+ HL S
Sbjct: 293 LKNLETLELGGCCNITNTGLLLIAWGLKKLRHLNLRSCWHISDQGIGHLAGFSRETAEGN 352
Query: 141 -TLEKLWLSET--------GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLE 191
LE L L + G A G+ L S+ NLS + VTD L+ L + KLE
Sbjct: 353 LQLEYLGLQDCQRLSDEALGHIAQGLTSLKSI-NLSFC----VSVTDSGLKHLARMPKLE 407
Query: 192 YLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDL 250
L+L +S+ G A +L +G+ L++SF ++ +D
Sbjct: 408 QLNLRSCDNISDIGMA---------YLTEGGSGINS---------LDVSFCDKI---SDQ 446
Query: 251 VLSLTALQNLNHLERLNLEQTQVSDATLFPLS-TFKELIHLSLRNAS-LTDVSLHQLS-S 307
L+ A Q L L L+L Q Q++D + ++ + EL +L++ S +TD L L+
Sbjct: 447 ALTHIA-QGLYRLRSLSLNQCQITDQGMLKIAKSLHELENLNIGQCSRITDKGLQTLAED 505
Query: 308 LSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLL 346
LS L + + L++ G+ L+ L+L G WL+
Sbjct: 506 LSNLKTIDLYGCTQLSSKGIDIIMKLPKLQKLNL-GLWLV 544
>gi|22347554|gb|AAM95922.1| internalin A precursor [Listeria monocytogenes]
Length = 741
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 121/226 (53%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 101 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 156
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 157 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 211
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++GA + + +++ L L L
Sbjct: 212 -TLASLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTN 265
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 266 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 307
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TDL L+ LT L L+L + +S+ A + L +LS
Sbjct: 79 ITPLANLTNLTGLTLFNNQITDL--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 136
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 137 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 187
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 188 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 231
>gi|283781267|ref|YP_003372022.1| hypothetical protein Psta_3501 [Pirellula staleyi DSM 6068]
gi|283439720|gb|ADB18162.1| hypothetical protein Psta_3501 [Pirellula staleyi DSM 6068]
Length = 436
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 98/189 (51%), Gaps = 14/189 (7%)
Query: 127 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 186
++T ++ L +L+KL L L++D +A L+SL++L LDL +TD L L++
Sbjct: 245 EITADEIRALGEWESLKKLMLLHAKLSSDALAALASLESLEQLDLEECNLTDDDLAHLKL 304
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFP----RLSFLNLAWTGVTKLPNISSLECLNLSFIQ 242
KL L L +++ G L F L F N++ + +L + +LE LNLS+ +
Sbjct: 305 PAKLTILGLKRNEIDGPGLRHLVPFQLKQIGLEFNNISNATLGELAQLRTLETLNLSYCR 364
Query: 243 QV---GAETDLVLSLTALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNASLT 298
Q+ G E+ + LQ + H+ +L L QV+DA+L + L H+++R ++
Sbjct: 365 QIDNQGIESGV------LQRMTHVRQLGLRGLKQVTDASLAEIVKMTHLKHITIRETGIS 418
Query: 299 DVSLHQLSS 307
S+ ++ +
Sbjct: 419 WESVDKMKA 427
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 95/223 (42%), Gaps = 47/223 (21%)
Query: 165 NLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA---- 220
L+ L L G V+D V L+ L++L ++ + ++N G VL+ F +L ++A
Sbjct: 91 QLAHLGLWGEGVSDEVFARSVALSDLQFLSIYETNITNEGLQVLRKFSKLRSFSVAPVSR 150
Query: 221 ----------WT----------------GVTKLPNISSLECL----------NLSFIQQV 244
W+ G+ L NI+++E L +L+ +Q
Sbjct: 151 YEKSMYGAPQWSYPFLKQRSDRPKITVQGLEPLRNIATIESLQLIDAQLAPSDLAILQSW 210
Query: 245 GAETDLVLSLT----ALQNLNHLER---LNLEQTQVSDATLFPLSTFKELIHLSLRNASL 297
+ LS T A+Q+L +R L L +++ + L ++ L L L +A L
Sbjct: 211 PKLGSIALSTTMTSEAVQHLAACKRVSNLTLGYREITADEIRALGEWESLKKLMLLHAKL 270
Query: 298 TDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
+ +L L+SL L L + + LT+ L K P L +L L
Sbjct: 271 SSDALAALASLESLEQLDLEECNLTDDDLAHLKLPAKLTILGL 313
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 62/124 (50%), Gaps = 6/124 (4%)
Query: 36 RLPAHLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSL 95
+LPA L + L R + P L + + I L N +A + L R L +L
Sbjct: 303 KLPAKLT---ILGLKRNEIDGPGLRHLVPFQLKQIGLEFNNISNAT-LGELAQLRTLETL 358
Query: 96 NVADCRRVTSSAL--WALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLT 153
N++ CR++ + + L MT +++L L +VTDA + ++ ++ L+ + + ETG++
Sbjct: 359 NLSYCRQIDNQGIESGVLQRMTHVRQLGLRGLKQVTDASLAEIVKMTHLKHITIRETGIS 418
Query: 154 ADGI 157
+ +
Sbjct: 419 WESV 422
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 99/233 (42%), Gaps = 35/233 (15%)
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALL---SSLQNLSVLDLG-------GLP-- 175
V+D +++S L+ L + ET +T +G+ +L S L++ SV + G P
Sbjct: 102 VSDEVFARSVALSDLQFLSIYETNITNEGLQVLRKFSKLRSFSVAPVSRYEKSMYGAPQW 161
Query: 176 -------------VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT 222
+T L L+ + +E L L +Q++ A+L+ +P+L + L+ T
Sbjct: 162 SYPFLKQRSDRPKITVQGLEPLRNIATIESLQLIDAQLAPSDLAILQSWPKLGSIALSTT 221
Query: 223 ----GVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATL 278
V L + L L + + E + AL L++L L ++S L
Sbjct: 222 MTSEAVQHLAACKRVSNLTLGYREITADE------IRALGEWESLKKLMLLHAKLSSDAL 275
Query: 279 FPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP 331
L++ + L L L +LTD L L +KLT L ++ + GL P
Sbjct: 276 AALASLESLEQLDLEECNLTDDDLAHLKLPAKLTILGLKRNEIDGPGLRHLVP 328
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 112/269 (41%), Gaps = 34/269 (12%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGM 133
E ++ E + L F LRS +VA R S A LK+ S K+T G+
Sbjct: 123 ETNITNEGLQVLRKFSKLRSFSVAPVSRYEKSMYGAPQWSYPFLKQR--SDRPKITVQGL 180
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
+ L +I+T+E L L + L +A+L S L + L T + ++Q L +
Sbjct: 181 EPLRNIATIESLQLIDAQLAPSDLAILQSWPKLGSIALS----TTMTSEAVQHLAACK-- 234
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT--KLPNISSLECLNLSFIQQVGAETDLV 251
R+S L L + +T ++ + E L + +D
Sbjct: 235 -------------------RVSNLTLGYREITADEIRALGEWESLKKLMLLHAKLSSD-- 273
Query: 252 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+L AL +L LE+L+LE+ ++D L L +L L L+ + L L +L
Sbjct: 274 -ALAALASLESLEQLDLEECNLTDDDLAHLKLPAKLTILGLKRNEIDGPGLRHLVPF-QL 331
Query: 312 TNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
+ + ++N+ LG R+L+ L+L
Sbjct: 332 KQIGLEFNNISNATLGELAQLRTLETLNL 360
>gi|313485070|gb|ADR53006.1| InlA [Listeria monocytogenes]
Length = 800
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 121/226 (53%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++GA + + +++ L L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTN 321
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 322 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TDL L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDL--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|298360234|gb|ADI77696.1| internalin A [Listeria monocytogenes]
gi|298360500|gb|ADI77829.1| internalin A [Listeria monocytogenes]
gi|298360708|gb|ADI77933.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 121/226 (53%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++GA + + ++++L L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISSLAGLTALTN 321
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L ++D+S +SSL+KL
Sbjct: 322 LELNENQLED--ISPISNLKNLTYLTLYFNDISDIS--PVSSLTKL 363
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TDL L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDL--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|194239392|emb|CAQ76836.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 121/226 (53%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++GA + + +++ L L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTN 321
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 322 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TDL L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDL--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|22347556|gb|AAM95923.1| internalin A precursor [Listeria monocytogenes]
Length = 744
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 121/226 (53%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 101 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 156
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 157 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 211
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++GA + + +++ L L L
Sbjct: 212 -TLASLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTN 265
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 266 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 307
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TDL L+ LT L L+L + +S+ A + L +LS
Sbjct: 79 ITPLANLTNLTGLTLFNNQITDL--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 136
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 137 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 187
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 188 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 231
>gi|402861838|ref|XP_003895284.1| PREDICTED: F-box/LRR-repeat protein 2 isoform 1 [Papio anubis]
gi|380811466|gb|AFE77608.1| F-box/LRR-repeat protein 2 isoform 1 [Macaca mulatta]
Length = 423
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 161/342 (47%), Gaps = 26/342 (7%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC-LKELDLSRCVK 127
+ LRG V D+ + R + LN+ C ++T S ++L+ LK LDL+ CV
Sbjct: 83 LSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVS 142
Query: 128 VTDAGMKHLL-SISTLEKLWLSETG-LTADGI-ALLSSLQNLSVLDLGGLP-VTDLVLRS 183
VT++ +K + LE L LS +T DGI AL+ + L L L G + D L+
Sbjct: 143 VTNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKH 202
Query: 184 LQ-VLTKLEYLDLWG-SQVSNRGAA-VLKMFPRLSFLNLAWTGVTKLPNIS----SLECL 236
+Q +L L+L S++++ G + + RL L L +G + L + S L C
Sbjct: 203 IQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCL--SGCSNLTDASLTALGLNCP 260
Query: 237 NLSFIQQVGAE--TDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTF-KELIHLSL 292
L ++ TD +L A +N + LE+++LE+ ++D+TL LS +L LSL
Sbjct: 261 RLQILEAARCSHLTDAGFTLLA-RNCHELEKMDLEECILITDSTLIQLSIHCPKLQALSL 319
Query: 293 RNASL-TDVSLHQLSSLS----KLTNLSIRDAVL-TNSGLGSFKPPRSLKLLDLHGGWLL 346
+ L TD + LS+ + +L L + + +L T+ L + R L+ L+L+ +
Sbjct: 320 SHCELITDDGILHLSNSTCGHERLRVLELDNCLLITDVALEHLENCRGLERLELYDCQQV 379
Query: 347 TEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSL 388
T I + P ++V + + P + +G R +
Sbjct: 380 TRAGIKRMRAQLPHVKVHAYFAPVTPPTAVAGSGQRLCRCCV 421
>gi|344174745|emb|CCA86555.1| leucine-rich-repeat type III effector protein (GALA5) [Ralstonia
syzygii R24]
Length = 468
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 118/287 (41%), Gaps = 25/287 (8%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
+ AE L L SL+V++ R + AL T L L +S ++ G K L
Sbjct: 111 IGAEGARRLANHPTLTSLDVSNGR-IGPEGARALADNTKLTTLSVSHN-RIGAEGAKALA 168
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
+ TL L +SE G+ +G L++ L+ L++ + ++L L LD+ G
Sbjct: 169 ASKTLTSLDISENGIGNEGACALATNAKLTTLNVNRNQIGVEGAKALAAGEALTSLDIGG 228
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNL--SFIQQVGAE--- 247
+ + + G L RL+ LN+ T GV L +L L + + I GA
Sbjct: 229 NDIGDEGVRALAANARLTTLNVERTRVGADGVGALAASKTLTSLRIDSNTIGDAGARALA 288
Query: 248 TDLVLSL-------------TALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 294
T+ L+ AL L LNL + DA S LI LS+R
Sbjct: 289 TNTSLTTLHIESNGISPAGAQALAANTTLTTLNLGYNGIGDAGAQAWSANTTLISLSVRR 348
Query: 295 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 341
+ L+D L++ LT L D + ++G + R+L LD+
Sbjct: 349 SGLSDAGATTLAASKTLTTLDAGDNTIRDAGARALAANRTLTTLDVR 395
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 108/267 (40%), Gaps = 27/267 (10%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
EN + E L L +LNV + ++ AL L LD+ + D G++
Sbjct: 180 ENGIGNEGACALATNAKLTTLNV-NRNQIGVEGAKALAAGEALTSLDIG-GNDIGDEGVR 237
Query: 135 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 194
L + + L L + T + ADG+ L++ + L+ L + + D R+L T L L
Sbjct: 238 ALAANARLTTLNVERTRVGADGVGALAASKTLTSLRIDSNTIGDAGARALATNTSLTTLH 297
Query: 195 LWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSL 254
+ + +S GA L L+ LNL + G+ + Q A T L+
Sbjct: 298 IESNGISPAGAQALAANTTLTTLNLGYNGIGD------------AGAQAWSANTTLI--- 342
Query: 255 TALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 314
L++ ++ +SDA L+ K L L + ++ D L++ LT L
Sbjct: 343 ----------SLSVRRSGLSDAGATTLAASKTLTTLDAGDNTIRDAGARALAANRTLTTL 392
Query: 315 SIRDAVLTNSGLGSFKPPRSLKLLDLH 341
+R + N+G + L LDL
Sbjct: 393 DVRSNEIENAGARALAANTRLASLDLR 419
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 116/262 (44%), Gaps = 29/262 (11%)
Query: 117 LKELDLSRCVK-VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP 175
LKELDLSRC +T AG+ HL + L +L + + + A+G L++ L+ LD+
Sbjct: 76 LKELDLSRCRGPITAAGIAHLSRLP-LVRLNVRDKRIGAEGARRLANHPTLTSLDVSNGR 134
Query: 176 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNI 230
+ R+L TKL L + +++ GA L L+ L+++ G+ L
Sbjct: 135 IGPEGARALADNTKLTTLSVSHNRIGAEGAKALAASKTLTSLDISENGIGNEGACALATN 194
Query: 231 SSLECLNLSFIQQVGAETDLVLS-------------------LTALQNLNHLERLNLEQT 271
+ L LN++ Q+G E L+ + AL L LN+E+T
Sbjct: 195 AKLTTLNVNR-NQIGVEGAKALAAGEALTSLDIGGNDIGDEGVRALAANARLTTLNVERT 253
Query: 272 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP 331
+V + L+ K L L + + ++ D L++ + LT L I ++ +G +
Sbjct: 254 RVGADGVGALAASKTLTSLRIDSNTIGDAGARALATNTSLTTLHIESNGISPAGAQALAA 313
Query: 332 PRSLKLLDLHGGWLLTEDAILQ 353
+L L+L G+ DA Q
Sbjct: 314 NTTLTTLNL--GYNGIGDAGAQ 333
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 8/144 (5%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
++ + AL T L L+L + DAG + + +TL L + +GL+ G L++
Sbjct: 303 ISPAGAQALAANTTLTTLNLGYN-GIGDAGAQAWSANTTLISLSVRRSGLSDAGATTLAA 361
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT 222
+ L+ LD G + D R+L L LD+ +++ N GA L RL+ L+L
Sbjct: 362 SKTLTTLDAGDNTIRDAGARALAANRTLTTLDVRSNEIENAGARALAANTRLASLDLRNN 421
Query: 223 GVTK------LPNISSLECLNLSF 240
VTK L N +L L +SF
Sbjct: 422 RVTKAGVRALLAN-RTLSSLGVSF 444
>gi|407849405|gb|EKG04153.1| hypothetical protein TCSYLVIO_004793 [Trypanosoma cruzi]
Length = 835
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 144/327 (44%), Gaps = 63/327 (19%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTS-SALWALTGMTCLKELDLSRCVKVTDAGMKHL 136
+ E +A++ + LR + + +C ++ + L +L G L+ L +SR +V+D G++ L
Sbjct: 252 ITEEGLAFISSCNSLRHIQLDNCMKLQGINCLGSLIG---LRTLSVSR-NRVSDDGIRSL 307
Query: 137 LSISTLEKLWL-----------------------SETGLTADGIALLSSLQNLSVLDLGG 173
++ LE+L L +E +T +G A L++ + L L
Sbjct: 308 SNLRNLEQLRLVSFNRLSSVEPVLCLDKLLELDITENWVTDEGCAALANCGQIQKLKLAS 367
Query: 174 L-PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA-WTGVTKLPNIS 231
V+D+ R + LT L +LDL + V + +L + RL L++A +GV +
Sbjct: 368 CRCVSDV--RWICALTSLRFLDLSKTHVRSADLQLLTVCQRLEELHVASCSGVKDASFVE 425
Query: 232 SL----------------------ECLNLSFI--QQVGAETDLVLSLTALQNLNHLERLN 267
L +C L+F+ Q TD+ ++ L L LN
Sbjct: 426 GLLSLGHLDLTDTSIKDAGTQSLRKCTALTFLSLQDCRFLTDIQF----VEPLKDLLNLN 481
Query: 268 LEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 326
LE T+V DA + PL +L LSLR+ LTDV L L L +L + +T+ G+
Sbjct: 482 LEGTEVVDANIIPLMHCTKLEVLSLRHCLFLTDVRC--LRELKALKSLDLSGTYVTDEGV 539
Query: 327 GSFKPPRSLKLLDLHGGWLLTEDAILQ 353
SL+ +DL G L+T L+
Sbjct: 540 SDVSQCISLERIDLSGCCLITHFEFLR 566
>gi|355560097|gb|EHH16825.1| hypothetical protein EGK_12181, partial [Macaca mulatta]
gi|355747130|gb|EHH51744.1| hypothetical protein EGM_11181, partial [Macaca fascicularis]
Length = 423
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 161/342 (47%), Gaps = 26/342 (7%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC-LKELDLSRCVK 127
+ LRG V D+ + R + LN+ C ++T S ++L+ LK LDL+ CV
Sbjct: 83 LSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVS 142
Query: 128 VTDAGMKHLL-SISTLEKLWLSETG-LTADGI-ALLSSLQNLSVLDLGGLP-VTDLVLRS 183
VT++ +K + LE L LS +T DGI AL+ + L L L G + D L+
Sbjct: 143 VTNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKH 202
Query: 184 LQ-VLTKLEYLDLWG-SQVSNRGAA-VLKMFPRLSFLNLAWTGVTKLPNIS----SLECL 236
+Q +L L+L S++++ G + + RL L L +G + L + S L C
Sbjct: 203 IQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCL--SGCSNLTDASLTALGLNCP 260
Query: 237 NLSFIQQVGAE--TDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTF-KELIHLSL 292
L ++ TD +L A +N + LE+++LE+ ++D+TL LS +L LSL
Sbjct: 261 RLQILEAARCSHLTDAGFTLLA-RNCHELEKMDLEECILITDSTLIQLSIHCPKLQALSL 319
Query: 293 RNASL-TDVSLHQLSSLS----KLTNLSIRDAVL-TNSGLGSFKPPRSLKLLDLHGGWLL 346
+ L TD + LS+ + +L L + + +L T+ L + R L+ L+L+ +
Sbjct: 320 SHCELITDDGILHLSNSTCGHERLRVLELDNCLLITDVALEHLENCRGLERLELYDCQQV 379
Query: 347 TEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSL 388
T I + P ++V + + P + +G R +
Sbjct: 380 TRAGIKRMRAQLPHVKVHAYFAPVTPPTAVAGSGQRLCRCCV 421
>gi|386052707|ref|YP_005970265.1| internalin A [Listeria monocytogenes Finland 1998]
gi|130774801|gb|ABO32414.1| InlA [Listeria monocytogenes]
gi|130774805|gb|ABO32415.1| InlA [Listeria monocytogenes]
gi|130774807|gb|ABO32416.1| InlA [Listeria monocytogenes]
gi|150371724|dbj|BAF65677.1| internalin A [Listeria monocytogenes]
gi|150371780|dbj|BAF65679.1| internalin A [Listeria monocytogenes]
gi|150371784|dbj|BAF65681.1| internalin A [Listeria monocytogenes]
gi|150371788|dbj|BAF65683.1| internalin A [Listeria monocytogenes]
gi|150371790|dbj|BAF65684.1| internalin A [Listeria monocytogenes]
gi|150371792|dbj|BAF65685.1| internalin A [Listeria monocytogenes]
gi|150371798|dbj|BAF65688.1| internalin A [Listeria monocytogenes]
gi|150371802|dbj|BAF65690.1| internalin A [Listeria monocytogenes]
gi|150371808|dbj|BAF65693.1| internalin A [Listeria monocytogenes]
gi|150371814|dbj|BAF65696.1| internalin A [Listeria monocytogenes]
gi|150371818|dbj|BAF65698.1| internalin A [Listeria monocytogenes]
gi|150371824|dbj|BAF65701.1| internalin A [Listeria monocytogenes]
gi|150371830|dbj|BAF65704.1| internalin A [Listeria monocytogenes]
gi|150371832|dbj|BAF65705.1| internalin A [Listeria monocytogenes]
gi|150371834|dbj|BAF65706.1| internalin A [Listeria monocytogenes]
gi|150371836|dbj|BAF65707.1| internalin A [Listeria monocytogenes]
gi|150371838|dbj|BAF65708.1| internalin A [Listeria monocytogenes]
gi|150371844|dbj|BAF65711.1| internalin A [Listeria monocytogenes]
gi|150371848|dbj|BAF65713.1| internalin A [Listeria monocytogenes]
gi|150371850|dbj|BAF65714.1| internalin A [Listeria monocytogenes]
gi|150371854|dbj|BAF65716.1| internalin A [Listeria monocytogenes]
gi|150371864|dbj|BAF65721.1| internalin A [Listeria monocytogenes]
gi|150371870|dbj|BAF65724.1| internalin A [Listeria monocytogenes]
gi|290350828|dbj|BAI78335.1| internalin A [Listeria monocytogenes]
gi|290350832|dbj|BAI78337.1| internalin A [Listeria monocytogenes]
gi|290350834|dbj|BAI78338.1| internalin A [Listeria monocytogenes]
gi|290350840|dbj|BAI78341.1| internalin A [Listeria monocytogenes]
gi|298359802|gb|ADI77480.1| internalin A [Listeria monocytogenes]
gi|298359828|gb|ADI77493.1| internalin A [Listeria monocytogenes]
gi|298359876|gb|ADI77517.1| internalin A [Listeria monocytogenes]
gi|298359878|gb|ADI77518.1| internalin A [Listeria monocytogenes]
gi|298359918|gb|ADI77538.1| internalin A [Listeria monocytogenes]
gi|298359964|gb|ADI77561.1| internalin A [Listeria monocytogenes]
gi|298359966|gb|ADI77562.1| internalin A [Listeria monocytogenes]
gi|298360014|gb|ADI77586.1| internalin A [Listeria monocytogenes]
gi|298360038|gb|ADI77598.1| internalin A [Listeria monocytogenes]
gi|298360084|gb|ADI77621.1| internalin A [Listeria monocytogenes]
gi|298360104|gb|ADI77631.1| internalin A [Listeria monocytogenes]
gi|298360134|gb|ADI77646.1| internalin A [Listeria monocytogenes]
gi|298360170|gb|ADI77664.1| internalin A [Listeria monocytogenes]
gi|298360178|gb|ADI77668.1| internalin A [Listeria monocytogenes]
gi|298360214|gb|ADI77686.1| internalin A [Listeria monocytogenes]
gi|298360242|gb|ADI77700.1| internalin A [Listeria monocytogenes]
gi|298360244|gb|ADI77701.1| internalin A [Listeria monocytogenes]
gi|298360254|gb|ADI77706.1| internalin A [Listeria monocytogenes]
gi|298360278|gb|ADI77718.1| internalin A [Listeria monocytogenes]
gi|298360310|gb|ADI77734.1| internalin A [Listeria monocytogenes]
gi|298360334|gb|ADI77746.1| internalin A [Listeria monocytogenes]
gi|298360338|gb|ADI77748.1| internalin A [Listeria monocytogenes]
gi|298360376|gb|ADI77767.1| internalin A [Listeria monocytogenes]
gi|298360384|gb|ADI77771.1| internalin A [Listeria monocytogenes]
gi|298360436|gb|ADI77797.1| internalin A [Listeria monocytogenes]
gi|298360532|gb|ADI77845.1| internalin A [Listeria monocytogenes]
gi|298360542|gb|ADI77850.1| internalin A [Listeria monocytogenes]
gi|298360552|gb|ADI77855.1| internalin A [Listeria monocytogenes]
gi|298360564|gb|ADI77861.1| internalin A [Listeria monocytogenes]
gi|298360568|gb|ADI77863.1| internalin A [Listeria monocytogenes]
gi|298360596|gb|ADI77877.1| internalin A [Listeria monocytogenes]
gi|298360666|gb|ADI77912.1| internalin A [Listeria monocytogenes]
gi|298360710|gb|ADI77934.1| internalin A [Listeria monocytogenes]
gi|346645358|gb|AEO37983.1| internalin A [Listeria monocytogenes Finland 1998]
gi|443428778|gb|AGC92188.1| internalin A [Listeria monocytogenes]
gi|443428804|gb|AGC92201.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 121/226 (53%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++GA + + +++ L L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTN 321
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 322 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TDL L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDL--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|340052077|emb|CBY84390.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 121/226 (53%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++GA + + +++ L L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTN 321
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 322 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TDL L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDL--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|347549464|ref|YP_004855792.1| internalin peptidoglycan linked protein [Listeria ivanovii subsp.
ivanovii PAM 55]
gi|346982535|emb|CBW86538.1| Internalin, putative peptidoglycan linked protein (LPXTG motif)
[Listeria ivanovii subsp. ivanovii PAM 55]
Length = 558
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 132/275 (48%), Gaps = 44/275 (16%)
Query: 50 IRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALW 109
I++ L S+ +V N EL S+ + + +YL +L + S L
Sbjct: 55 IKKELGKTSVTDVVTQN----ELDTITSISGSGVDTIEGMQYLNNLTFIVFNKDNISDLS 110
Query: 110 ALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVL 169
L G+T +K + L+ K+ D I+ L+++ +L L
Sbjct: 111 PLAGLTKMKHIMLAYN-KIKD--------------------------ISPLANMTDLEYL 143
Query: 170 DLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
+ G ++D+ SL LTKL +++L +Q+S+ +VL + +L LA ++ +
Sbjct: 144 SIPGNQISDI--SSLLNLTKLNHVELENNQISD--ISVLANLTDIDYLTLA---TNQISD 196
Query: 230 ISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIH 289
IS++ NL+ + + A + + ++AL NL +L LN+ + Q+S+ + LS KE+
Sbjct: 197 ISAVG--NLTKLTYLTARKNKIKDISALANLTNLGLLNVSKNQISEVS--ALSNLKEITI 252
Query: 290 LSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS 324
L + + ++DVS ++S+ KL NL I D +T++
Sbjct: 253 LDIDHNQISDVS--PIASMDKLRNLVISDNQITDA 285
>gi|296228320|ref|XP_002807717.1| PREDICTED: LOW QUALITY PROTEIN: F-box/LRR-repeat protein 2
[Callithrix jacchus]
Length = 426
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 159/347 (45%), Gaps = 33/347 (9%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC-LKELDLSRCVK 127
+ LRG V D+ + R + LN+ C ++T S ++L+ LK LDL+ CV
Sbjct: 83 LSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVS 142
Query: 128 VTDAGMKHLL-SISTLEKLWLSETG-LTADGI-ALLSSLQNLSVLDLGGLP-VTDLVLRS 183
+T++ +K + LE L LS +T DGI AL+ + L L L G + D L+
Sbjct: 143 ITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKH 202
Query: 184 LQ-VLTKLEYLDLWG-SQVSNRGAA-VLKMFPRLSFLNLAWTGVTKLPNIS----SLECL 236
+Q +L L+L S++++ G V + RL L L +G + L + S L C
Sbjct: 203 IQNYCHELVSLNLQSCSRITDEGVVQVCRGCHRLQALCL--SGCSNLTDASLTALGLNCP 260
Query: 237 NL-------SFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTF-KEL 287
L F Q AE T QN + LE+++LE+ ++D+TL LS +L
Sbjct: 261 RLQXVHRAFCFAAQSLAEQSFT---TVAQNCHELEKMDLEECILITDSTLIQLSIHCPKL 317
Query: 288 IHLSLRNASL-TDVSLHQLSSLS----KLTNLSIRDAVL-TNSGLGSFKPPRSLKLLDLH 341
LSL + L TD + LS+ + +L L + + +L T+ L + R L+ L+L+
Sbjct: 318 QALSLSHCELITDDGILHLSNSTCGHERLRVLELDNCLLITDVALEHLENCRGLERLELY 377
Query: 342 GGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSL 388
+T I + P ++V + + P + +G R +
Sbjct: 378 DCQQVTRAGIKRMRAQLPHVKVHAYFAPVTPPTAVAGSGQRLCRCCV 424
>gi|47096455|ref|ZP_00234048.1| internalin A precursor [Listeria monocytogenes str. 1/2a F6854]
gi|254913677|ref|ZP_05263689.1| internalin A [Listeria monocytogenes J2818]
gi|254937992|ref|ZP_05269689.1| internalin A [Listeria monocytogenes F6900]
gi|386046091|ref|YP_005964423.1| internalin A [Listeria monocytogenes J0161]
gi|47015176|gb|EAL06116.1| internalin A precursor [Listeria monocytogenes str. 1/2a F6854]
gi|194239410|emb|CAQ76845.1| internalin A [Listeria monocytogenes]
gi|223006792|gb|ACM69353.1| internalin A [Listeria monocytogenes]
gi|223006794|gb|ACM69354.1| internalin A [Listeria monocytogenes]
gi|258610604|gb|EEW23212.1| internalin A [Listeria monocytogenes F6900]
gi|293591690|gb|EFG00025.1| internalin A [Listeria monocytogenes J2818]
gi|298359952|gb|ADI77555.1| internalin A [Listeria monocytogenes]
gi|298359956|gb|ADI77557.1| internalin A [Listeria monocytogenes]
gi|298359986|gb|ADI77572.1| internalin A [Listeria monocytogenes]
gi|298360086|gb|ADI77622.1| internalin A [Listeria monocytogenes]
gi|298360130|gb|ADI77644.1| internalin A [Listeria monocytogenes]
gi|298360206|gb|ADI77682.1| internalin A [Listeria monocytogenes]
gi|298360572|gb|ADI77865.1| internalin A [Listeria monocytogenes]
gi|298360644|gb|ADI77901.1| internalin A [Listeria monocytogenes]
gi|345533082|gb|AEO02523.1| internalin A [Listeria monocytogenes J0161]
gi|443428774|gb|AGC92186.1| internalin A [Listeria monocytogenes]
gi|443428776|gb|AGC92187.1| internalin A [Listeria monocytogenes]
gi|443428868|gb|AGC92233.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 121/226 (53%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++GA + + +++ L L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTN 321
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 322 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TDL L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDL--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|313485065|gb|ADR53005.1| InlA [Listeria monocytogenes]
Length = 801
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|404412528|ref|YP_006698115.1| internalin A [Listeria monocytogenes SLCC7179]
gi|298360000|gb|ADI77579.1| internalin A [Listeria monocytogenes]
gi|298360676|gb|ADI77917.1| internalin A [Listeria monocytogenes]
gi|404238227|emb|CBY59628.1| internalin A (LPXTG motif) [Listeria monocytogenes SLCC7179]
gi|443428842|gb|AGC92220.1| internalin A [Listeria monocytogenes]
gi|443428848|gb|AGC92223.1| internalin A [Listeria monocytogenes]
gi|443428858|gb|AGC92228.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 121/226 (53%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++GA + + +++ L L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTN 321
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 322 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TDL L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDL--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|290350826|dbj|BAI78334.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 121/226 (53%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++GA + + +++ L L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTN 321
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 322 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TDL L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDL--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|430746592|ref|YP_007205721.1| WD40 repeat-containing protein [Singulisphaera acidiphila DSM
18658]
gi|430018312|gb|AGA30026.1| WD40 repeat-containing protein [Singulisphaera acidiphila DSM
18658]
Length = 830
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 91/214 (42%), Gaps = 21/214 (9%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
E +D + +L L L++ R+ L L + L +L+LS + +D +
Sbjct: 630 EEGIDDAGLEHLARLVNLEGLSIHQTARIRGPGLAHLAKLPKLTKLNLSSGL--SDKAVA 687
Query: 135 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 194
L + L++L L T L G+A L + L+ L L VTD L +L+ + ++E L
Sbjct: 688 RLAPLKELKRLSLDHTDLRDSGMAALKGMTTLTELSLDETKVTDAGLSALKGMVQMERLS 747
Query: 195 LWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSL 254
L VS RG G+ L +S L+ L+ + Q L
Sbjct: 748 L--GNVSVRG-----------------PGLANLKGMSRLKSLSFVAVAQYKPSPLTDAGL 788
Query: 255 TALQNLNHLERLNLEQTQVSDATLFPLSTFKELI 288
L+NL L+ LNL +T V+DA + K LI
Sbjct: 789 VHLENLPALDFLNLGETSVTDAGMAAARKIKPLI 822
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 95/198 (47%), Gaps = 20/198 (10%)
Query: 176 VTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW----TGVTKLPNI 230
+ D L L L LE L + +++ G A L P+L+ LNL+ V +L +
Sbjct: 633 IDDAGLEHLARLVNLEGLSIHQTARIRGPGLAHLAKLPKLTKLNLSSGLSDKAVARLAPL 692
Query: 231 SSLECLNLSFIQQVGAETDLVLS-LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIH 289
L+ L+L TDL S + AL+ + L L+L++T+V+DA L L ++
Sbjct: 693 KELKRLSLD-------HTDLRDSGMAALKGMTTLTELSLDETKVTDAGLSALKGMVQMER 745
Query: 290 LSLRNASLTDVSLHQLSSLSKLTNLSI------RDAVLTNSGLGSFKPPRSLKLLDLHGG 343
LSL N S+ L L +S+L +LS + + LT++GL + +L L+L G
Sbjct: 746 LSLGNVSVRGPGLANLKGMSRLKSLSFVAVAQYKPSPLTDAGLVHLENLPALDFLNL-GE 804
Query: 344 WLLTEDAILQFCKMHPRI 361
+T+ + K+ P I
Sbjct: 805 TSVTDAGMAAARKIKPLI 822
>gi|130774825|gb|ABO32425.1| InlA [Listeria monocytogenes]
Length = 800
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 121/226 (53%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++GA + + +++ L L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTN 321
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 322 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TDL L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDL--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|194326157|emb|CAQ77237.1| internalin A [Listeria monocytogenes]
gi|290350820|dbj|BAI78331.1| internalin A [Listeria monocytogenes]
gi|290350836|dbj|BAI78339.1| internalin A [Listeria monocytogenes]
gi|298360124|gb|ADI77641.1| internalin A [Listeria monocytogenes]
gi|298360394|gb|ADI77776.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 121/226 (53%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++GA + + +++ L L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTN 321
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 322 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TDL L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDL--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|130774793|gb|ABO32411.1| InlA [Listeria monocytogenes]
gi|194239384|emb|CAQ76832.1| internalin A [Listeria monocytogenes]
Length = 797
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 121/226 (53%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++GA + + +++ L L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTN 321
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 322 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TDL L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDL--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|410971755|ref|XP_003992330.1| PREDICTED: F-box/LRR-repeat protein 2 isoform 2 [Felis catus]
Length = 339
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 155/321 (48%), Gaps = 25/321 (7%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTC-LKELDLSRCVKVTDAGMKHLL-SISTLEKLWL 147
R + LN+ C ++T S ++L+ LK LDL+ CV +T++ +K + LE L L
Sbjct: 20 RNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSITNSSLKGISEGCRNLEYLNL 79
Query: 148 SETG-LTADGI-ALLSSLQNLSVLDLGGLP-VTDLVLRSLQ-VLTKLEYLDLWG-SQVSN 202
S +T DGI AL+ + L L L G + D L+ +Q +L L+L S+V++
Sbjct: 80 SWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKHIQNYCHELVSLNLQSCSRVTD 139
Query: 203 RGAA-VLKMFPRLSFLNLAWTGVTKLPNIS----SLECLNLSFIQQVGAE--TDLVLSLT 255
G + + RL L L +G + L + S +L C L ++ TD +L
Sbjct: 140 EGVVQICRGCHRLQALCL--SGCSHLTDASLTALALNCPRLQILEAARCSHLTDAGFTLL 197
Query: 256 ALQNLNHLERLNLEQTQ-VSDATLFPLSTF-KELIHLSLRNASL-TDVSLHQLSSLS--- 309
A +N + LE+++LE+ ++D+TL LS +L LSL + L TD + LS+ +
Sbjct: 198 A-RNCHDLEKMDLEECVLITDSTLIQLSVHCPKLQALSLSHCELITDDGILHLSNSTCGH 256
Query: 310 -KLTNLSIRDAVL-TNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHEL 367
+L L + + +L T+ L + R L+ L+L+ +T I + P ++V
Sbjct: 257 ERLRVLELDNCLLITDVALEHLENCRGLERLELYDCQQVTRAGIKRMRAQLPHVKVHAYF 316
Query: 368 SVICPSDQIGSNGPSPSRTSL 388
+ + P +G +G R +
Sbjct: 317 APVTPPTAVGGSGQRLCRCCV 337
>gi|167861888|gb|ACA05643.1| InlA [Listeria monocytogenes]
gi|194326163|emb|CAQ77240.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 121/226 (53%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++GA + + +++ L L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTN 321
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 322 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TDL L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDL--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|298359882|gb|ADI77520.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 121/226 (53%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++GA + + +++ L L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTN 321
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 322 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TDL L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDL--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|195383050|ref|XP_002050239.1| GJ20310 [Drosophila virilis]
gi|194145036|gb|EDW61432.1| GJ20310 [Drosophila virilis]
Length = 542
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 98/184 (53%), Gaps = 14/184 (7%)
Query: 92 LRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET 150
L L + DC+R++ AL + G+T LK ++LS CV VTD+G+KHL + LE+L L
Sbjct: 352 LEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDSGLKHLARMPKLEQLNLRSC 411
Query: 151 GLTAD-GIALLS-SLQNLSVLDLGGL-PVTDLVLRSL-QVLTKLEYLDLWGSQVSNRGA- 205
+D G+A L+ ++ LD+ ++D L + Q L +L L L Q++++G
Sbjct: 412 DNISDIGMAYLTEGGSGINSLDVSFCDKISDQALTHIAQGLYRLRSLSLNQCQITDQGML 471
Query: 206 AVLKMFPRLSFLNLAWT------GVTKLP-NISSLECLNLSFIQQVGAE-TDLVLSLTAL 257
+ K L LN+ G+ L ++S+L+ ++L Q+ ++ D+++ L L
Sbjct: 472 KIAKSLHELENLNIGQCSRITDKGLQTLAEDLSNLKTIDLYGCTQLSSKGIDIIMKLPKL 531
Query: 258 QNLN 261
Q LN
Sbjct: 532 QKLN 535
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 126/280 (45%), Gaps = 50/280 (17%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSIS------- 140
+ L +L + C +T++ L + G+ L+ L+L C ++D G+ HL S
Sbjct: 290 LKNLETLELGGCCNITNTGLLLIAWGLKKLRHLNLRSCWHISDQGIGHLAGFSRETAEGN 349
Query: 141 -TLEKLWLSET--------GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLE 191
LE L L + G A G+ L S+ NLS + VTD L+ L + KLE
Sbjct: 350 LQLEYLGLQDCQRLSDEALGHIAQGLTSLKSI-NLSFC----VSVTDSGLKHLARMPKLE 404
Query: 192 YLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDL 250
L+L +S+ G A +L +G+ L++SF ++ +D
Sbjct: 405 QLNLRSCDNISDIGMA---------YLTEGGSGINS---------LDVSFCDKI---SDQ 443
Query: 251 VLSLTALQNLNHLERLNLEQTQVSDATLFPLS-TFKELIHLSLRNAS-LTDVSLHQLS-S 307
L+ A Q L L L+L Q Q++D + ++ + EL +L++ S +TD L L+
Sbjct: 444 ALTHIA-QGLYRLRSLSLNQCQITDQGMLKIAKSLHELENLNIGQCSRITDKGLQTLAED 502
Query: 308 LSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLL 346
LS L + + L++ G+ L+ L+L G WL+
Sbjct: 503 LSNLKTIDLYGCTQLSSKGIDIIMKLPKLQKLNL-GLWLV 541
>gi|130774819|gb|ABO32422.1| InlA [Listeria monocytogenes]
gi|167861894|gb|ACA05646.1| InlA [Listeria monocytogenes]
gi|167861946|gb|ACA05672.1| InlA [Listeria monocytogenes]
gi|167861948|gb|ACA05673.1| InlA [Listeria monocytogenes]
gi|194239402|emb|CAQ76841.1| internalin A [Listeria monocytogenes]
gi|298360052|gb|ADI77605.1| internalin A [Listeria monocytogenes]
gi|298360164|gb|ADI77661.1| internalin A [Listeria monocytogenes]
gi|298360372|gb|ADI77765.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 121/226 (53%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++GA + + +++ L L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTN 321
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 322 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TDL L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDL--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|130774795|gb|ABO32412.1| InlA [Listeria monocytogenes]
gi|150371796|dbj|BAF65687.1| internalin A [Listeria monocytogenes]
gi|150371806|dbj|BAF65692.1| internalin A [Listeria monocytogenes]
gi|150371822|dbj|BAF65700.1| internalin A [Listeria monocytogenes]
gi|194326149|emb|CAQ77233.1| internalin A [Listeria monocytogenes]
gi|298359930|gb|ADI77544.1| internalin A [Listeria monocytogenes]
gi|298360322|gb|ADI77740.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 121/226 (53%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++GA + + +++ L L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTN 321
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 322 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TDL L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDL--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|298359950|gb|ADI77554.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 119/226 (52%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++ + + +++ L L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTN 321
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 322 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TDL L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDL--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|298360230|gb|ADI77694.1| internalin A [Listeria monocytogenes]
gi|298360588|gb|ADI77873.1| internalin A [Listeria monocytogenes]
gi|298360606|gb|ADI77882.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 121/226 (53%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++GA + + +++ L L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTN 321
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 322 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TDL L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDL--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|290350830|dbj|BAI78336.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 121/226 (53%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++GA + + +++ L L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLTPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTN 321
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 322 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TDL L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDL--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|294358401|gb|ADE73853.1| InlA [Listeria monocytogenes]
Length = 800
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 119/226 (52%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++ + + +++ L L L
Sbjct: 268 -TLAGLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTN 321
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 322 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 85/168 (50%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TDL L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDL--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+ L+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLAGLTNLTDLDLANNQISN 287
>gi|302805851|ref|XP_002984676.1| hypothetical protein SELMODRAFT_423753 [Selaginella moellendorffii]
gi|300147658|gb|EFJ14321.1| hypothetical protein SELMODRAFT_423753 [Selaginella moellendorffii]
Length = 615
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 110/232 (47%), Gaps = 14/232 (6%)
Query: 84 AYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLE 143
++L + L L+++D ++T S +L + CL+ LDLSR ++T + K L + LE
Sbjct: 183 SFLRKLKSLEQLDLSDSSKLTGSIPSSLGELKCLQRLDLSRISQLTGSIPKSLGDLQNLE 242
Query: 144 KLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNR 203
L LS T L+ L L + L + G V +L L KL+ LDL NR
Sbjct: 243 YLDLSVTMLSGSIPPSLGKLASFETLKISGTNVAGRCPDTLGNLKKLKVLDLS----FNR 298
Query: 204 GAAVLKMFP-RLSFLNLAWTGVTKLPNISSLEC-LNLSFIQQVGAETDLVLSLTALQNLN 261
G + + + +L +W G L L C ++LSF GA L SL + NL
Sbjct: 299 GLSTISLSGCKLQGSIPSWFGSINLKEHPELTCEIDLSFNSITGA---LPNSLGRISNLK 355
Query: 262 HLE-RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 312
HL + N Q ++ D+ T +L +L LR+ LT V + LS++ K T
Sbjct: 356 HLFLQSNKIQGKLPDSF---GKTLPKLRYLELRDNFLTGVPI-DLSNMGKGT 403
>gi|83592173|ref|YP_425925.1| hypothetical protein Rru_A0837 [Rhodospirillum rubrum ATCC 11170]
gi|386348881|ref|YP_006047129.1| hypothetical protein F11_04310 [Rhodospirillum rubrum F11]
gi|83575087|gb|ABC21638.1| Leucine-rich repeat [Rhodospirillum rubrum ATCC 11170]
gi|346717317|gb|AEO47332.1| leucine-rich repeat-containing protein [Rhodospirillum rubrum F11]
Length = 1085
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 109/214 (50%), Gaps = 25/214 (11%)
Query: 108 LWALTGMTCLKELDLSRCVKVTD----AGMKHLLSISTLEKLWLSETGLTADGIALLSSL 163
L LTG+ L+ L LS +VTD AG+K+L SI+ LS T +T +A L+ L
Sbjct: 109 LTPLTGIKSLQSLILSE-TQVTDLTPLAGLKNLQSIN------LSATQIT--DLAPLAGL 159
Query: 164 QNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLNLAWT 222
+NL L L VTDL L L L++L L G++V + A LK L T
Sbjct: 160 ENLQNLTLSYTTVTDLA--PLAGLENLQHLILLGTRVIDLTPLAGLKSLQSLDLSGTRVT 217
Query: 223 GVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 282
+ L + SL+ L+L + TD+ L L++L L+ LNL +T V+D L PL+
Sbjct: 218 NIAPLVGLKSLQSLDLRRTRV----TDIA-PLVGLKSLKSLQSLNLSRTPVTD--LAPLA 270
Query: 283 TFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 316
+ L +L+L ++TD L L+ L L N+ +
Sbjct: 271 GLENLQNLTLSYTTVTD--LAPLAGLENLQNIDL 302
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 77/148 (52%), Gaps = 12/148 (8%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKEL---DLSRCVKVTDAGMKHLLSISTLEKLWLS 148
L+SL D RR + + L G+ LK L +LSR VTD + L + L+ L LS
Sbjct: 225 LKSLQSLDLRRTRVTDIAPLVGLKSLKSLQSLNLSR-TPVTD--LAPLAGLENLQNLTLS 281
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
T +T +A L+ L+NL +DLGG V DL L L L+ +DL G++V + A L
Sbjct: 282 YTTVT--DLAPLAGLENLQNIDLGGTEVIDLA--PLAGLENLQNIDLGGTEVID--LAPL 335
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L L++T VT L ++ LE L
Sbjct: 336 AGLENLQNLTLSYTTVTDLAPLAGLENL 363
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 65/125 (52%), Gaps = 18/125 (14%)
Query: 220 AWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLF 279
A T +T L I SL+ L LS Q V LT L L +L+ +NL TQ++D L
Sbjct: 105 AVTDLTPLTGIKSLQSLILSETQ--------VTDLTPLAGLKNLQSINLSATQITD--LA 154
Query: 280 PLSTFKELIHLSLRNASLTDVS-LHQLSSLSKLTNLSIRDAVLTN-SGLGSFKPPRSLKL 337
PL+ + L +L+L ++TD++ L L +L L L R LT +GL +SL+
Sbjct: 155 PLAGLENLQNLTLSYTTVTDLAPLAGLENLQHLILLGTRVIDLTPLAGL------KSLQS 208
Query: 338 LDLHG 342
LDL G
Sbjct: 209 LDLSG 213
>gi|313485072|gb|ADR53007.1| InlA [Listeria monocytogenes]
Length = 800
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 121/226 (53%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++GA + + +++ L L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTN 321
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 322 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TDL L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDL--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|254828935|ref|ZP_05233622.1| internalin A [Listeria monocytogenes FSL N3-165]
gi|130774797|gb|ABO32413.1| InlA [Listeria monocytogenes]
gi|130774811|gb|ABO32418.1| InlA [Listeria monocytogenes]
gi|194239388|emb|CAQ76834.1| internalin A [Listeria monocytogenes]
gi|258601346|gb|EEW14671.1| internalin A [Listeria monocytogenes FSL N3-165]
gi|298360424|gb|ADI77791.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|46390385|dbj|BAD15849.1| putative F-box protein [Oryza sativa Japonica Group]
gi|125581198|gb|EAZ22129.1| hypothetical protein OsJ_05792 [Oryza sativa Japonica Group]
Length = 660
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 140/299 (46%), Gaps = 39/299 (13%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMT-CLKELDLSRCVKVTDAGMKHLL-SIS 140
MA + LR ++V C VT+ AL A+ L++L +C +TDAG+K S
Sbjct: 357 MANAAGLQNLRCMSVTSCPGVTNLALAAIAKFCPSLRQLSFRKCGHMTDAGLKAFTESAR 416
Query: 141 TLEKLWLSET-GLTADGI-----------ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLT 188
LE L L E G+T GI LS ++ + + D+ P + +SLQ LT
Sbjct: 417 LLESLQLEECNGVTLVGILDFLVNCGPKFRSLSLVKCMGIKDICSTPAQLPLCKSLQFLT 476
Query: 189 KLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW----TGVTKLPNISSLEC----LNLSF 240
+ D + + A V + P L ++L+ T LP I+S E ++LS
Sbjct: 477 IKDCPDFTDASL----AVVGMVCPYLEQVDLSGLREVTDRGLLPLINSSEGGLVKVDLSG 532
Query: 241 IQQVGAETDLVLSLTALQNLNHLERLNLEQ-TQVSDATLFPLS-TFKELIHLSLRNASLT 298
+ + TD +S + L++++LE ++++DA+LF +S EL L L ++
Sbjct: 533 CKNI---TDAAVSTLVKGHGKSLKQVSLEGCSKITDASLFAISENCTELAELDLSKCMVS 589
Query: 299 DVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKM 357
D + +++L+ +L +R VL+ SG P+S+ L G L E LQFC M
Sbjct: 590 D---NGVATLASAKHLKLR--VLSLSGCSKVT-PKSVSFLGNMGQSL--EGLNLQFCNM 640
>gi|219821363|gb|ACL37820.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 119/226 (52%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 99 INPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 154
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 155 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 209
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++ + + +++ L L L
Sbjct: 210 -TLASLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTN 263
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 264 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 305
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 77 ITPLANLSNLTGLTLFNNQITDI--NPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 134
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 135 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 186 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 229
>gi|112961772|gb|ABI28534.1| internalin A [Listeria monocytogenes]
Length = 748
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 112 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 167
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 168 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 221
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 222 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 276
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 277 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 314
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 86 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 143
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 144 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 194
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 195 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 238
>gi|112961700|gb|ABI28486.1| internalin A [Listeria monocytogenes]
Length = 748
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 112 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 167
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 168 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 221
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 222 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 276
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 277 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 314
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 86 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 143
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 144 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 194
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 195 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 238
>gi|294358395|gb|ADE73850.1| InlA [Listeria monocytogenes]
Length = 800
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 119/226 (52%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++ + + +++ L L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTN 321
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 322 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TDL L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDL--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|290979162|ref|XP_002672303.1| predicted protein [Naegleria gruberi]
gi|284085879|gb|EFC39559.1| predicted protein [Naegleria gruberi]
Length = 371
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 116/275 (42%), Gaps = 23/275 (8%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCV---KVTDAG 132
N + E Y+ + L +L+++ + + + LK+L C+ + D G
Sbjct: 36 NKIGVEGAKYISELKQLTNLDIS----YNNIGAEGVEHIGNLKQLTF-LCIYHNNIGDEG 90
Query: 133 MKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 192
KHL ++ L L+ + + +G+ + L+ LS L++ V D + L L +L
Sbjct: 91 AKHLSALKQLTYLYTAFNNIGVEGVKYIIKLKQLSYLNICSNKVGDEGAKYLSELKQLTN 150
Query: 193 LDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSF--IQQVG 245
L++ S + +G + +L+ LN++ G + + L CLN+ + I G
Sbjct: 151 LNISNSNICAKGVEHITEMNQLTILNISTNNIGIEGAKYIGKLKQLTCLNIYYSNIDIEG 210
Query: 246 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 305
A+ + + L LN+ + + K+L L++ N + D +
Sbjct: 211 AK--------YISEMKQLTDLNISYNNIGIEGAKYIGKLKQLTCLTIYNNYICDEGAKYI 262
Query: 306 SSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
S L++LTNL+I + + G + L LD+
Sbjct: 263 SELNQLTNLNIYSNNIGDEGAKYISELKQLTNLDI 297
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 135/319 (42%), Gaps = 61/319 (19%)
Query: 76 NSVDAEWMAYLGAFRYLRSL-----NVADCRRVTSSALWALTGMTC-------------- 116
N++ AE + ++G + L L N+ D SAL LT +
Sbjct: 60 NNIGAEGVEHIGNLKQLTFLCIYHNNIGDEGAKHLSALKQLTYLYTAFNNIGVEGVKYII 119
Query: 117 -LKELD-LSRCV-KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 173
LK+L L+ C KV D G K+L + L L +S + + A G+ ++ + L++L++
Sbjct: 120 KLKQLSYLNICSNKVGDEGAKYLSELKQLTNLNISNSNICAKGVEHITEMNQLTILNIST 179
Query: 174 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLP 228
+ + + L +L L+++ S + GA + +L+ LN+++ G +
Sbjct: 180 NNIGIEGAKYIGKLKQLTCLNIYYSNIDIEGAKYISEMKQLTDLNISYNNIGIEGAKYIG 239
Query: 229 NISSLECLNL--SFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFK- 285
+ L CL + ++I GA+ + LN L LN+ + D +S K
Sbjct: 240 KLKQLTCLTIYNNYICDEGAK--------YISELNQLTNLNIYSNNIGDEGAKYISELKQ 291
Query: 286 --------------------ELIHLSLRNASLTDV---SLHQLSSLSKLTNLSIRDAVLT 322
EL L++ +ASL ++ +S L +LTNL I ++
Sbjct: 292 LTNLDISVNQIGAKGVKYIAELNQLTILSASLNNIRDEGAKYISELKQLTNLDISSNNIS 351
Query: 323 NSGLGSFKPPRSLKLLDLH 341
G+ F+ + L +L+++
Sbjct: 352 IEGVKCFEEMKHLTVLEIY 370
>gi|223698892|gb|ACN19168.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 76 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 131
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 132 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 185
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 186 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 240
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 241 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 278
Score = 44.7 bits (104), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 50 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 107
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 108 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 158
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 159 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 202
>gi|112959536|gb|ABI27295.1| internalin A [Listeria monocytogenes]
gi|112959546|gb|ABI27300.1| internalin A [Listeria monocytogenes]
Length = 734
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 98 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 153
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 154 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 207
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 208 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 262
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 263 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 300
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 72 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 129
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 130 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 180
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 181 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 224
>gi|223698622|gb|ACN18988.1| internalin A [Listeria monocytogenes]
gi|223698634|gb|ACN18996.1| internalin A [Listeria monocytogenes]
gi|223698694|gb|ACN19036.1| internalin A [Listeria monocytogenes]
gi|223698712|gb|ACN19048.1| internalin A [Listeria monocytogenes]
gi|223698745|gb|ACN19070.1| internalin A [Listeria monocytogenes]
gi|223698751|gb|ACN19074.1| internalin A [Listeria monocytogenes]
gi|223698766|gb|ACN19084.1| internalin A [Listeria monocytogenes]
gi|223698769|gb|ACN19086.1| internalin A [Listeria monocytogenes]
gi|223698772|gb|ACN19088.1| internalin A [Listeria monocytogenes]
gi|223698775|gb|ACN19090.1| internalin A [Listeria monocytogenes]
gi|223698778|gb|ACN19092.1| internalin A [Listeria monocytogenes]
gi|223698787|gb|ACN19098.1| internalin A [Listeria monocytogenes]
gi|223698793|gb|ACN19102.1| internalin A [Listeria monocytogenes]
gi|223698799|gb|ACN19106.1| internalin A [Listeria monocytogenes]
gi|223698802|gb|ACN19108.1| internalin A [Listeria monocytogenes]
gi|223698805|gb|ACN19110.1| internalin A [Listeria monocytogenes]
gi|223698817|gb|ACN19118.1| internalin A [Listeria monocytogenes]
gi|223698859|gb|ACN19146.1| internalin A [Listeria monocytogenes]
gi|223698865|gb|ACN19150.1| internalin A [Listeria monocytogenes]
gi|223698979|gb|ACN19226.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 76 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 131
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 132 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 185
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 186 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 240
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 241 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 278
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 50 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 107
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 108 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 158
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 159 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 202
>gi|441473145|emb|CCQ22899.1| Internalin-A [Listeria monocytogenes N53-1]
Length = 455
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 119/226 (52%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIGT 268
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++ + + +++ L L L
Sbjct: 269 --LASLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTN 321
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 322 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TDL L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDL--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGN-QVTDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|255025517|ref|ZP_05297503.1| internalin A [Listeria monocytogenes FSL J2-003]
Length = 744
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 119/226 (52%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++ + + +++ L L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTN 321
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 322 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TDL L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDL--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|223006802|gb|ACM69358.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|281210637|gb|EFA84803.1| hypothetical protein PPL_01796 [Polysphondylium pallidum PN500]
Length = 739
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 11/218 (5%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
M +L SL + DC VT+ ++ +L M L+EL L R K+TD+G+ L S+ L
Sbjct: 382 MENFKRMEHLTSLILTDCA-VTNVSVKSLKQMVKLEELSL-RNTKITDSGLTLLSSLVEL 439
Query: 143 EKLWLSETGLTADGIAL-LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQ-- 199
+ L LS +T +GI + L L+L VT+ +++Q LTKL + L+ S
Sbjct: 440 KFLDLSACNITDEGITFAIPCFTKLETLNLSATSVTE---KAIQKLTKLPLVSLYLSNCP 496
Query: 200 -VSNRGAAVLKMFPR-LSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTAL 257
+ N+ + +F + L L++ T + ++ NL+ ++ G ++ ++ L
Sbjct: 497 MIGNQSLFFITLFGKTLKLLDIFGTKIGGAGFVNLQRLPNLTVLKLPGRDSLSDAHISHL 556
Query: 258 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 295
L ++ RL+L ++ T+ PL+ + L LSL N
Sbjct: 557 NALQNVRRLDLSD-YINITTIAPLNPLRYLCELSLSNT 593
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 18/221 (8%)
Query: 110 ALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVL 169
L+ M L+++ L C TD GM++ + L L L++ +T + L + L L
Sbjct: 359 CLSRMYHLQKVSLVACFGFTDLGMENFKRMEHLTSLILTDCAVTNVSVKSLKQMVKLEEL 418
Query: 170 DLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAA-VLKMFPRLSFLNLAWTGV---- 224
L +TD L L L +L++LDL +++ G + F +L LNL+ T V
Sbjct: 419 SLRNTKITDSGLTLLSSLVELKFLDLSACNITDEGITFAIPCFTKLETLNLSATSVTEKA 478
Query: 225 ----TKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFP 280
TKLP +S L LS +G ++ ++L L+ L++ T++ A
Sbjct: 479 IQKLTKLPLVS----LYLSNCPMIGNQSLFFITLFG----KTLKLLDIFGTKIGGAGFVN 530
Query: 281 LSTFKELIHLSLRN-ASLTDVSLHQLSSLSKLTNLSIRDAV 320
L L L L SL+D + L++L + L + D +
Sbjct: 531 LQRLPNLTVLKLPGRDSLSDAHISHLNALQNVRRLDLSDYI 571
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 99/219 (45%), Gaps = 18/219 (8%)
Query: 92 LRSLNVADCRRVTSSALWALT--GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
L SL +++C + + +L+ +T G T LK LD+ K+ AG +L + L L L
Sbjct: 487 LVSLYLSNCPMIGNQSLFFITLFGKT-LKLLDIFG-TKIGGAGFVNLQRLPNLTVLKLPG 544
Query: 150 TGLTADG-IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
+D I+ L++LQN+ LDL + + L L L L L +++S+ +
Sbjct: 545 RDSLSDAHISHLNALQNVRRLDLSDY-INITTIAPLNPLRYLCELSLSNTKISDDSIDSI 603
Query: 209 KMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHL 263
L LNL T GV+KL ++S L L+L G D LT L L L
Sbjct: 604 IGCSNLVILNLDRTRVRDIGVSKLISLS-LHTLSL---MATGIRGD---CLTTLSQLITL 656
Query: 264 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 302
LN+ + DA + PL L ++ LRN SL
Sbjct: 657 TSLNISSNDIQDAKVLPLLDLPNLTYIDLRNTQAFTASL 695
>gi|7022695|dbj|BAA91691.1| unnamed protein product [Homo sapiens]
Length = 423
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 162/344 (47%), Gaps = 26/344 (7%)
Query: 68 EAIELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC-LKELDLSRC 125
+ + LRG V D+ + R + LN+ C ++T S ++L+ LK LDL+ C
Sbjct: 81 KKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSC 140
Query: 126 VKVTDAGMKHLL-SISTLEKLWLSETG-LTADGI-ALLSSLQNLSVLDLGGLP-VTDLVL 181
V +T++ +K + LE L LS +T DGI AL+ + L L L G + D L
Sbjct: 141 VSITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEAL 200
Query: 182 RSLQ-VLTKLEYLDLWG-SQVSNRGAA-VLKMFPRLSFLNLAWTGVTKLPNIS----SLE 234
+ +Q +L L+L S++++ G + + RL L L +G + L + S L
Sbjct: 201 KHIQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCL--SGCSNLTDASLTALGLN 258
Query: 235 CLNLSFIQQVGAE--TDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTF-KELIHL 290
C L ++ TD +L A +N + LE+++LE+ ++D+TL LS +L L
Sbjct: 259 CPRLQILEAARCSHLTDAGFTLLA-RNCHELEKMDLEECILITDSTLIQLSIHCPKLQAL 317
Query: 291 SLRNASL-TDVSLHQLSSLS----KLTNLSIRDAVL-TNSGLGSFKPPRSLKLLDLHGGW 344
SL + L TD + LS+ + +L L + + +L T+ L + R L+ L+L+
Sbjct: 318 SLSHCELITDDGILHLSNSTCGHERLRVLELDNCLLITDVALEHLENCRGLERLELYDCQ 377
Query: 345 LLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSL 388
+T I + P ++V + + P + +G R +
Sbjct: 378 QVTRAGIKRMRAQLPHVKVHAYFAPVTPPTAVAGSGQRLCRCCV 421
>gi|223698697|gb|ACN19038.1| truncated internalin A [Listeria monocytogenes]
gi|223698841|gb|ACN19134.1| truncated internalin A [Listeria monocytogenes]
gi|223698877|gb|ACN19158.1| truncated internalin A [Listeria monocytogenes]
gi|223698922|gb|ACN19188.1| truncated internalin A [Listeria monocytogenes]
Length = 406
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 119/226 (52%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 72 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 127
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 128 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIGT 183
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++ + + +++ L L L
Sbjct: 184 --LASLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTN 236
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 237 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 278
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TDL L+ LT L L+L + +S+ A + L +LS
Sbjct: 50 ITPLANLTNLTGLTLFNNQITDL--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 107
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 108 FGN-QVTDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 158
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 159 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 202
>gi|219821366|gb|ACL37822.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 103 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 158
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 159 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 212
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 213 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 267
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 268 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 305
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 77 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 134
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 135 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 186 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 229
>gi|195487977|ref|XP_002092120.1| GE11843 [Drosophila yakuba]
gi|194178221|gb|EDW91832.1| GE11843 [Drosophila yakuba]
Length = 533
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 97/184 (52%), Gaps = 14/184 (7%)
Query: 92 LRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET 150
L L + DC+R++ AL + G+T LK ++LS CV VTD+G+KHL + LE+L L
Sbjct: 343 LEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDSGLKHLARMPKLEQLNLRSC 402
Query: 151 GLTAD-GIALLS-SLQNLSVLDLGGL-PVTDLVLRSL-QVLTKLEYLDLWGSQVSNRGA- 205
+D G+A L+ ++ LD+ ++D L + Q L +L L L Q+++ G
Sbjct: 403 DNISDIGMAYLTEGGSGINSLDVSFCDKISDQALTHIAQGLYRLRSLSLNQCQITDHGML 462
Query: 206 AVLKMFPRLSFLNLAWT------GVTKLP-NISSLECLNLSFIQQVGAE-TDLVLSLTAL 257
+ K L LN+ G+ L ++++L+ ++L Q+ ++ D+++ L L
Sbjct: 463 KIAKALHELENLNIGQCSRITDKGLQTLAEDLTNLKTIDLYGCTQLSSKGIDIIMKLPKL 522
Query: 258 QNLN 261
Q LN
Sbjct: 523 QKLN 526
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 111/250 (44%), Gaps = 49/250 (19%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSIS------- 140
R L +L + C +T++ L + G+ LK L+L C ++D G+ HL S
Sbjct: 281 LRNLETLELGGCCNITNTGLLLIAWGLKKLKHLNLRSCWHISDQGIGHLAGFSRETAEGN 340
Query: 141 -TLEKLWLSET--------GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLE 191
LE L L + G A G+ L S+ NLS + VTD L+ L + KLE
Sbjct: 341 LQLEYLGLQDCQRLSDEALGHIAQGLTSLKSI-NLSFC----VSVTDSGLKHLARMPKLE 395
Query: 192 YLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDL 250
L+L +S+ G A +L +G+ L++SF ++ +D
Sbjct: 396 QLNLRSCDNISDIGMA---------YLTEGGSGINS---------LDVSFCDKI---SDQ 434
Query: 251 VLSLTALQNLNHLERLNLEQTQVSDATLFPLS-TFKELIHLSLRNAS-LTDVSLHQLSSL 308
L+ A Q L L L+L Q Q++D + ++ EL +L++ S +TD L L+
Sbjct: 435 ALTHIA-QGLYRLRSLSLNQCQITDHGMLKIAKALHELENLNIGQCSRITDKGLQTLA-- 491
Query: 309 SKLTNLSIRD 318
LTNL D
Sbjct: 492 EDLTNLKTID 501
>gi|112961610|gb|ABI28426.1| internalin A [Listeria monocytogenes]
gi|112961613|gb|ABI28428.1| internalin A [Listeria monocytogenes]
gi|112961625|gb|ABI28436.1| internalin A [Listeria monocytogenes]
gi|112961628|gb|ABI28438.1| internalin A [Listeria monocytogenes]
gi|112961631|gb|ABI28440.1| internalin A [Listeria monocytogenes]
gi|112961634|gb|ABI28442.1| internalin A [Listeria monocytogenes]
gi|112961670|gb|ABI28466.1| internalin A [Listeria monocytogenes]
gi|112961673|gb|ABI28468.1| internalin A [Listeria monocytogenes]
gi|112961676|gb|ABI28470.1| internalin A [Listeria monocytogenes]
gi|112961688|gb|ABI28478.1| internalin A [Listeria monocytogenes]
gi|112961703|gb|ABI28488.1| internalin A [Listeria monocytogenes]
gi|112961712|gb|ABI28494.1| internalin A [Listeria monocytogenes]
gi|112961715|gb|ABI28496.1| internalin A [Listeria monocytogenes]
gi|112961724|gb|ABI28502.1| internalin A [Listeria monocytogenes]
gi|112961733|gb|ABI28508.1| internalin A [Listeria monocytogenes]
gi|112961736|gb|ABI28510.1| internalin A [Listeria monocytogenes]
gi|112961739|gb|ABI28512.1| internalin A [Listeria monocytogenes]
gi|112961742|gb|ABI28514.1| internalin A [Listeria monocytogenes]
gi|112961745|gb|ABI28516.1| internalin A [Listeria monocytogenes]
gi|112961754|gb|ABI28522.1| internalin A [Listeria monocytogenes]
Length = 751
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 112 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 167
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 168 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 221
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 222 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 276
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 277 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 314
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 86 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 143
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 144 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 194
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 195 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 238
>gi|112959508|gb|ABI27281.1| internalin A [Listeria monocytogenes]
Length = 737
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 98 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 153
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 154 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 207
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 208 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 262
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 263 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 300
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 72 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 129
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 130 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 180
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 181 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 224
>gi|223698682|gb|ACN19028.1| internalin A [Listeria monocytogenes]
Length = 712
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 76 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 131
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 132 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 185
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 186 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 240
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 241 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 278
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 50 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 107
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 108 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 158
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 159 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 202
>gi|112961790|gb|ABI28546.1| internalin A [Listeria monocytogenes]
Length = 693
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 57 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 112
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 113 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 166
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 167 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 221
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 222 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 259
Score = 44.7 bits (104), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 31 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 88
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 89 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 139
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 140 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 183
>gi|290996041|ref|XP_002680591.1| predicted protein [Naegleria gruberi]
gi|284094212|gb|EFC47847.1| predicted protein [Naegleria gruberi]
Length = 281
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 116/263 (44%), Gaps = 13/263 (4%)
Query: 79 DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLS 138
+ E + +L + L+ L++ D + + ++ + L LD+ R +++ G K+L
Sbjct: 13 EGEALNHLSELKQLKKLHIYDSY-IGDEGVRFISELKQLTTLDI-RNNGISEYGAKYLSE 70
Query: 139 ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
+ L L + + + A G +S L+ L++L + + D + L L +L YL++ +
Sbjct: 71 LKQLTFLIIDKNNIGAKGSKYISELKQLTILIIDKNNIDDEGAKYLSELKQLTYLNIQDN 130
Query: 199 QVSNRGAAVLKMFPRLS--FLN---LAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLS 253
++ + G+ + +L+ ++N + G L + L LN+S Q+G E
Sbjct: 131 RIGDEGSKYIGELKQLTDLYINNNQIGNEGAKYLSELKHLILLNISN-NQIGDE-----G 184
Query: 254 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 313
L L L L++ + D + LS K+L HL + + D + +S L ++
Sbjct: 185 AKYLCELKQLMDLDISCNDIGDEGIKYLSGLKQLTHLDISYNKIRDEGVKYISELKEIMY 244
Query: 314 LSIRDAVLTNSGLGSFKPPRSLK 336
L I + + + G LK
Sbjct: 245 LYINNNYIGDEGTKYLSEMNQLK 267
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 105/239 (43%), Gaps = 23/239 (9%)
Query: 133 MKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 192
+ HL + L+KL + ++ + +G+ +S L+ L+ LD+ +++ + L L +L +
Sbjct: 17 LNHLSELKQLKKLHIYDSYIGDEGVRFISELKQLTTLDIRNNGISEYGAKYLSELKQLTF 76
Query: 193 LDLWGSQVSNRGAAVLKMFPRLSFL-----NLAWTGVTKLPNISSLECLNL--------- 238
L + + + +G+ + +L+ L N+ G L + L LN+
Sbjct: 77 LIIDKNNIGAKGSKYISELKQLTILIIDKNNIDDEGAKYLSELKQLTYLNIQDNRIGDEG 136
Query: 239 -SFIQQVGAETDLVLSLTALQN--------LNHLERLNLEQTQVSDATLFPLSTFKELIH 289
+I ++ TDL ++ + N L HL LN+ Q+ D L K+L+
Sbjct: 137 SKYIGELKQLTDLYINNNQIGNEGAKYLSELKHLILLNISNNQIGDEGAKYLCELKQLMD 196
Query: 290 LSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 348
L + + D + LS L +LT+L I + + G+ + + L ++ ++ E
Sbjct: 197 LDISCNDIGDEGIKYLSGLKQLTHLDISYNKIRDEGVKYISELKEIMYLYINNNYIGDE 255
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 77/175 (44%), Gaps = 9/175 (5%)
Query: 180 VLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLS 239
L L L +L+ L ++ S + + G + +L+ L++ G+++ E L+
Sbjct: 16 ALNHLSELKQLKKLHIYDSYIGDEGVRFISELKQLTTLDIRNNGISEYGAKYLSELKQLT 75
Query: 240 FI----QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 295
F+ +GA+ +S L L L +++ + D LS K+L +L++++
Sbjct: 76 FLIIDKNNIGAKGSKYIS-----ELKQLTILIIDKNNIDDEGAKYLSELKQLTYLNIQDN 130
Query: 296 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 350
+ D + L +LT+L I + + N G + L LL++ + E A
Sbjct: 131 RIGDEGSKYIGELKQLTDLYINNNQIGNEGAKYLSELKHLILLNISNNQIGDEGA 185
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 66/143 (46%), Gaps = 2/143 (1%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
+N++D E YL + L LN+ D R+ + + L +L ++ ++ + G K
Sbjct: 105 KNNIDDEGAKYLSELKQLTYLNIQD-NRIGDEGSKYIGELKQLTDLYINNN-QIGNEGAK 162
Query: 135 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 194
+L + L L +S + +G L L+ L LD+ + D ++ L L +L +LD
Sbjct: 163 YLSELKHLILLNISNNQIGDEGAKYLCELKQLMDLDISCNDIGDEGIKYLSGLKQLTHLD 222
Query: 195 LWGSQVSNRGAAVLKMFPRLSFL 217
+ +++ + G + + +L
Sbjct: 223 ISYNKIRDEGVKYISELKEIMYL 245
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 66/140 (47%), Gaps = 2/140 (1%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
+N + E Y+G + L L + + + A + L+ + L L++S ++ D G K
Sbjct: 129 DNRIGDEGSKYIGELKQLTDLYINNNQIGNEGAKY-LSELKHLILLNISNN-QIGDEGAK 186
Query: 135 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 194
+L + L L +S + +GI LS L+ L+ LD+ + D ++ + L ++ YL
Sbjct: 187 YLCELKQLMDLDISCNDIGDEGIKYLSGLKQLTHLDISYNKIRDEGVKYISELKEIMYLY 246
Query: 195 LWGSQVSNRGAAVLKMFPRL 214
+ + + + G L +L
Sbjct: 247 INNNYIGDEGTKYLSEMNQL 266
>gi|223698748|gb|ACN19072.1| truncated internalin A [Listeria monocytogenes]
gi|223698961|gb|ACN19214.1| truncated internalin A [Listeria monocytogenes]
Length = 491
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 118/223 (52%), Gaps = 19/223 (8%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 75 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 130
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 131 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIGT--L 184
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNL 268
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 185 ASLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLEL 239
Query: 269 EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 240 NENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 278
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 50 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 107
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 108 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 158
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 159 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 202
>gi|130774791|gb|ABO32410.1| InlA [Listeria monocytogenes]
gi|298360240|gb|ADI77699.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|442624469|ref|NP_001261138.1| partner of paired, isoform B [Drosophila melanogaster]
gi|440214583|gb|AGB93669.1| partner of paired, isoform B [Drosophila melanogaster]
Length = 562
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 97/184 (52%), Gaps = 14/184 (7%)
Query: 92 LRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET 150
L L + DC+R++ AL + G+T LK ++LS CV VTD+G+KHL + LE+L L
Sbjct: 348 LEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDSGLKHLARMPKLEQLNLRSC 407
Query: 151 GLTAD-GIALLS-SLQNLSVLDLGGL-PVTDLVLRSL-QVLTKLEYLDLWGSQVSNRGA- 205
+D G+A L+ ++ LD+ ++D L + Q L +L L L Q+++ G
Sbjct: 408 DNISDIGMAYLTEGGSGINSLDVSFCDKISDQALTHIAQGLYRLRSLSLNQCQITDHGML 467
Query: 206 AVLKMFPRLSFLNLAWT------GVTKLP-NISSLECLNLSFIQQVGAE-TDLVLSLTAL 257
+ K L LN+ G+ L ++++L+ ++L Q+ ++ D+++ L L
Sbjct: 468 KIAKALHELENLNIGQCSRITDKGLQTLAEDLTNLKTIDLYGCTQLSSKGIDIIMKLPKL 527
Query: 258 QNLN 261
Q LN
Sbjct: 528 QKLN 531
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 111/250 (44%), Gaps = 49/250 (19%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSIS------- 140
R L +L + C +T++ L + G+ LK L+L C ++D G+ HL S
Sbjct: 286 LRNLETLELGGCCNITNTGLLLIAWGLKKLKHLNLRSCWHISDQGIGHLAGFSRETAEGN 345
Query: 141 -TLEKLWLSET--------GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLE 191
LE L L + G A G+ L S+ NLS + VTD L+ L + KLE
Sbjct: 346 LQLEYLGLQDCQRLSDEALGHIAQGLTSLKSI-NLSFC----VSVTDSGLKHLARMPKLE 400
Query: 192 YLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDL 250
L+L +S+ G A +L +G+ L++SF ++ +D
Sbjct: 401 QLNLRSCDNISDIGMA---------YLTEGGSGINS---------LDVSFCDKI---SDQ 439
Query: 251 VLSLTALQNLNHLERLNLEQTQVSDATLFPLS-TFKELIHLSLRNAS-LTDVSLHQLSSL 308
L+ A Q L L L+L Q Q++D + ++ EL +L++ S +TD L L+
Sbjct: 440 ALTHIA-QGLYRLRSLSLNQCQITDHGMLKIAKALHELENLNIGQCSRITDKGLQTLA-- 496
Query: 309 SKLTNLSIRD 318
LTNL D
Sbjct: 497 EDLTNLKTID 506
>gi|290976253|ref|XP_002670855.1| predicted protein [Naegleria gruberi]
gi|284084418|gb|EFC38111.1| predicted protein [Naegleria gruberi]
Length = 286
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 108/244 (44%), Gaps = 17/244 (6%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + + + L SLN+ + V +++ MT L LD+S + D G K
Sbjct: 36 NEIGPTGAKSISTMKQLTSLNIKN-NSVGVEGAHSISNMTRLTHLDISL-NNIGDEGAKI 93
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ + L L +S +T++G+ ++ L +L++G + + + ++ L++L LD+
Sbjct: 94 ICQLKQLTNLNISYNQITSNGMIPFKEMKQLIILNVGSNRIGNEGIENISGLSQLTELDI 153
Query: 196 WGSQVSNRGAAVLKMFPRLSFL-----NLAWTGVTKLPNISSLECLNL--SFIQQVGAET 248
G N GA + L+ L N+ G + + + CLNL +++ GA+
Sbjct: 154 GGCDFGNEGAKSISQLTNLTCLYCCSNNIREEGAKSISQLEKVTCLNLCVNYLHADGAK- 212
Query: 249 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 308
++ ++ L HL ++ ++ D L + L LS+R +++ + + L
Sbjct: 213 ----HISQMKQLTHLY---MDSNEIGDDGAEDLCGLENLKVLSIRGNNISYDMVQAIHEL 265
Query: 309 SKLT 312
K T
Sbjct: 266 GKFT 269
Score = 41.2 bits (95), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 11/155 (7%)
Query: 189 KLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL-----AWTGVTKLPNISSLECLNLSFIQQ 243
+L L + +++ GA + +L+ LN+ G + N++ L L++S +
Sbjct: 27 QLTSLGVENNEIGPTGAKSISTMKQLTSLNIKNNSVGVEGAHSISNMTRLTHLDIS-LNN 85
Query: 244 VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLH 303
+G E ++ L L LN+ Q++ + P K+LI L++ + + + +
Sbjct: 86 IGDEGAKIIC-----QLKQLTNLNISYNQITSNGMIPFKEMKQLIILNVGSNRIGNEGIE 140
Query: 304 QLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 338
+S LS+LT L I N G S +L L
Sbjct: 141 NISGLSQLTELDIGGCDFGNEGAKSISQLTNLTCL 175
>gi|219821333|gb|ACL37800.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 119/226 (52%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 99 INPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERL 154
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 155 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 209
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++ + + +++ L L L
Sbjct: 210 -TLASLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTN 263
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 264 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 305
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 77 ITPLANLTNLTGLTLFNNQITDI--NPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 134
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 135 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 186 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 229
>gi|219821276|gb|ACL37762.1| internalin A [Listeria monocytogenes]
gi|219821336|gb|ACL37802.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 103 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 158
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 159 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 212
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 213 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 267
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 268 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 305
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 77 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 134
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 135 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 186 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 229
>gi|150371828|dbj|BAF65703.1| internalin A [Listeria monocytogenes]
Length = 526
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 118/223 (52%), Gaps = 19/223 (8%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIGT--L 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNL 268
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLEL 324
Query: 269 EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 325 NENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|223698700|gb|ACN19040.1| truncated internalin A [Listeria monocytogenes]
Length = 599
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 76 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 131
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 132 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 185
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 186 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 240
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 241 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 278
Score = 44.7 bits (104), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 50 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 107
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 108 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 158
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 159 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 202
>gi|219821339|gb|ACL37804.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 103 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 158
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 159 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 212
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 213 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 267
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 268 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 305
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 77 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 134
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 135 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 186 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 229
>gi|219821288|gb|ACL37770.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 103 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 158
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 159 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 212
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 213 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 267
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 268 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 305
Score = 44.7 bits (104), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 77 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 134
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 135 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 186 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 229
>gi|219821282|gb|ACL37766.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 119/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 103 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 158
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 159 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 212
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + ++++L L L L L
Sbjct: 213 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISSLAGLTALTNLELN 267
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 268 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 305
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 77 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 134
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 135 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 186 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 229
>gi|219821279|gb|ACL37764.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 103 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 158
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 159 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 212
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 213 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 267
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 268 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 305
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 77 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 134
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 135 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 186 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 229
>gi|22347552|gb|AAM95921.1| internalin A precursor [Listeria monocytogenes]
Length = 744
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 105 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 160
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 161 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 214
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 215 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 269
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 270 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 307
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 79 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 136
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 137 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 187
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 188 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 231
>gi|320166208|gb|EFW43107.1| tyrosine-protein kinase Src42A [Capsaspora owczarzaki ATCC 30864]
Length = 1869
Score = 57.4 bits (137), Expect = 1e-05, Method: Composition-based stats.
Identities = 59/221 (26%), Positives = 97/221 (43%), Gaps = 2/221 (0%)
Query: 110 ALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVL 169
A TG+T L +L L ++T ++ L +L L +T + + L L L
Sbjct: 942 AFTGLTALTQLQLYNN-QITTVPSSAFTGLTALTQLSLYGNQITTISASAFAGLTALQAL 1000
Query: 170 DLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
L +T + + LT L +LDL GSQ+++ A V P L+ LNL ++ +P
Sbjct: 1001 YLNNNTITTIAANAFAGLTALNWLDLSGSQITSIPANVFSSLPALAQLNLYNNWLSAVPT 1060
Query: 230 ISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIH 289
+ L+ + G +S A LN L +L L+ Q++ + + L
Sbjct: 1061 SAFTGLTALTQLTMYGNRIT-TISANAFTGLNALVQLFLQSNQITTISASAFTGLSLLTQ 1119
Query: 290 LSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 330
L L N +T +S + + L+ LT L++ D T G FK
Sbjct: 1120 LYLSNNQITTISANAFTGLTLLTTLTLNDNPATTLPPGLFK 1160
Score = 53.5 bits (127), Expect = 2e-04, Method: Composition-based stats.
Identities = 58/248 (23%), Positives = 108/248 (43%), Gaps = 6/248 (2%)
Query: 102 RVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLS 161
++T+ A A TG+T L +L L ++T +S+L +L+L +TA + +
Sbjct: 766 QITTVAANAFTGLTALVQLQLYGN-QITTISASAFAGMSSLVQLYLYSNRITAIFVNAFT 824
Query: 162 SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW 221
L +LS+LD+ +T L + LT + L L+ + +S A F L+ L W
Sbjct: 825 GLTHLSLLDISNNQITSLPANAFTGLTAMTQLSLYNNSLS---AVPSSAFTGLTALQALW 881
Query: 222 TGVTKLPNISSLECLNLSFIQQVGAETDLVLSL--TALQNLNHLERLNLEQTQVSDATLF 279
++ ++ +L+ + Q+ + + ++ +A L+ L L L +S
Sbjct: 882 LYNNQITSVVVNAFTSLTALVQLQLYGNQITTIPASAFSGLSKLSLLQLNNNWLSAIPSS 941
Query: 280 PLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 339
+ L L L N +T V + L+ LT LS+ +T +F +L+ L
Sbjct: 942 AFTGLTALTQLQLYNNQITTVPSSAFTGLTALTQLSLYGNQITTISASAFAGLTALQALY 1001
Query: 340 LHGGWLLT 347
L+ + T
Sbjct: 1002 LNNNTITT 1009
Score = 46.6 bits (109), Expect = 0.028, Method: Composition-based stats.
Identities = 55/244 (22%), Positives = 106/244 (43%), Gaps = 2/244 (0%)
Query: 102 RVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLS 161
++T+ A +G+T L +L L ++T L +S L +L L +T+ S
Sbjct: 622 QITTVPANAFSGLTALVQLQLYGN-QITTIPSSALTGLSALTQLLLYNNRITSVPANGFS 680
Query: 162 SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW 221
L L+ L L +T ++ + LTKL YLDL +Q+++ A L+ L L
Sbjct: 681 GLTALTDLRLFNNTITSILANAFTGLTKLTYLDLSLNQLTSIPAGAFSGLTALTQLLLYN 740
Query: 222 TGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPL 281
++ +P+ S+ L + ++ A L L +L L Q++ +
Sbjct: 741 NWLSAVPS-SAFTGLTALLYLYLYNNQITTVAANAFTGLTALVQLQLYGNQITTISASAF 799
Query: 282 STFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 341
+ L+ L L + +T + ++ + L+ L+ L I + +T+ +F ++ L L+
Sbjct: 800 AGMSSLVQLYLYSNRITAIFVNAFTGLTHLSLLDISNNQITSLPANAFTGLTAMTQLSLY 859
Query: 342 GGWL 345
L
Sbjct: 860 NNSL 863
Score = 42.4 bits (98), Expect = 0.43, Method: Composition-based stats.
Identities = 67/284 (23%), Positives = 112/284 (39%), Gaps = 28/284 (9%)
Query: 88 AFRYLRSLNVADCRRVTSSAL--WALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
AF L LN SA+ A TG+T L +L L ++T ++ L+ L
Sbjct: 462 AFSGLSKLNTLQLNNNWLSAIPSSAFTGLTALTQLLLYNN-QITTVPSSAFTGLTALQFL 520
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+L + I S L L L L +T + + L+KL L L+ + +S +
Sbjct: 521 YLYNNQIATVAINAFSGLTALVQLRLDTNQITTVPANAFSGLSKLNTLHLYNNWLSAIPS 580
Query: 206 AVLKMFPRLSFLNLAWTGVTKLP------------------NISSLEC------LNLSFI 241
+ L+ L L +T +P I+++ L +
Sbjct: 581 SAFTGLTALTQLRLDTNQITTVPANAFSGLTALLYLYLYNNQITTVPANAFSGLTALVQL 640
Query: 242 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 301
Q G + + S +AL L+ L +L L +++ S L L L N ++T +
Sbjct: 641 QLYGNQITTIPS-SALTGLSALTQLLLYNNRITSVPANGFSGLTALTDLRLFNNTITSIL 699
Query: 302 LHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 345
+ + L+KLT L + LT+ G+F +L L L+ WL
Sbjct: 700 ANAFTGLTKLTYLDLSLNQLTSIPAGAFSGLTALTQLLLYNNWL 743
>gi|313485056|gb|ADR53002.1| InlA [Listeria monocytogenes]
Length = 789
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|167861900|gb|ACA05649.1| InlA [Listeria monocytogenes]
gi|194326161|emb|CAQ77239.1| internalin A [Listeria monocytogenes]
gi|298360364|gb|ADI77761.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|22347546|gb|AAM95918.1| internalin A precursor [Listeria monocytogenes]
gi|22347550|gb|AAM95920.1| internalin A precursor [Listeria monocytogenes]
Length = 744
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 105 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 160
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 161 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 214
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 215 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 269
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 270 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 307
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 79 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 136
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 137 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 187
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 188 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 231
>gi|6063090|gb|AAF03128.1|AF176518_1 F-box protein FBL2 [Homo sapiens]
Length = 425
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 161/342 (47%), Gaps = 26/342 (7%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC-LKELDLSRCVK 127
+ LRG V D+ + R + LN+ C ++T S ++L+ LK LDL+ CV
Sbjct: 85 LSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVS 144
Query: 128 VTDAGMKHLL-SISTLEKLWLSETG-LTADGI-ALLSSLQNLSVLDLGGLP-VTDLVLRS 183
+T++ +K + LE L LS +T DGI AL+ + L L L G + D L+
Sbjct: 145 ITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKH 204
Query: 184 LQ-VLTKLEYLDLWG-SQVSNRGAA-VLKMFPRLSFLNLAWTGVTKLPNIS----SLECL 236
+Q +L L+L S++++ G + + RL L L +G + L + S L C
Sbjct: 205 IQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCL--SGCSNLTDASLTALGLNCP 262
Query: 237 NLSFIQQVGAE--TDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTF-KELIHLSL 292
L ++ TD +L A +N + LE+++LE+ ++D+TL LS +L LSL
Sbjct: 263 RLQILEAARCSHLTDAGFTLLA-RNCHELEKMDLEECILITDSTLIQLSIHCPKLQALSL 321
Query: 293 RNASL-TDVSLHQLSSLS----KLTNLSIRDAVL-TNSGLGSFKPPRSLKLLDLHGGWLL 346
+ L TD + LS+ + +L L + + +L T+ L + R L+ L+L+ +
Sbjct: 322 SHCELITDDGILHLSNSTCGHERLRVLELDNCLLITDVALEHLENCRGLERLELYDCQQV 381
Query: 347 TEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSL 388
T I + P ++V + + P + +G R +
Sbjct: 382 TRAGIKRMRAQLPHVKVHAYFAPVTPPTAVAGSGQRLCRCCV 423
>gi|219821375|gb|ACL37828.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 103 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 158
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 159 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 212
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 213 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 267
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 268 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 305
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 77 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 134
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 135 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 186 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 229
>gi|354492507|ref|XP_003508389.1| PREDICTED: F-box/LRR-repeat protein 13 [Cricetulus griseus]
Length = 824
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 143/340 (42%), Gaps = 71/340 (20%)
Query: 66 NAEAIELRGENSVDAEWMAYLGA-FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSR 124
N + I G + Y+ + + + + DC+ +T S+L +L+ + L L+L+
Sbjct: 486 NLKKIRFEGNKRITDACFKYIDKNYPGINHIYMVDCKTLTDSSLKSLSVLKQLTVLNLTN 545
Query: 125 CVKVTDAGMKHLLSIST---LEKLWLSETGLTADG--IALLSSLQNLSVLDLGGLP-VTD 178
C++++DAG++ L S + +L L+ L D + L NL L L +TD
Sbjct: 546 CIRISDAGLRQFLDGSVSVKIRELNLNNCSLVGDPAIVKLSERCTNLHYLSLRNCEHLTD 605
Query: 179 LVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNL 238
L + + + L +DL G+ +S+ G A+L +L ++L+ EC N+
Sbjct: 606 LAIECIANMQSLISIDLSGTSISHEGLALLSRHRKLREVSLS-------------ECTNI 652
Query: 239 SFIQQVGAETDLVLSLTALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNASL 297
TD+ + ++N LE L++ +Q+SD + ++ F
Sbjct: 653 ---------TDMGIRAFCRSSMN-LEHLDVSHCSQLSDDIIKAVAIF------------- 689
Query: 298 TDVSLHQLSSLSKLTNLSIRDA-VLTNSGLGSFKPP-RSLKLLDLHGGWLLTEDAI---- 351
+++T+L+I +T+ GL + L +LD+ G LLT+ +
Sbjct: 690 ----------CTQITSLNIAGCPKITDGGLETLSAKCHYLHILDISGCILLTDQILQDLR 739
Query: 352 ----------LQFCKMHPRIEVWHELSVICPSDQIGSNGP 381
+QFCK + H++S + + S P
Sbjct: 740 VGCKQLRILKMQFCK-SISVAAAHKMSSVVQHQEYSSRNP 778
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 141/293 (48%), Gaps = 43/293 (14%)
Query: 105 SSALWALTGMTCLKELDLSRCVKVTDAGMKHLL-SISTLEKLWLSETGLTADGIALLS-S 162
+ L A++ L+EL++S C +TD M+H+ + L LS T +T + LL
Sbjct: 320 TKTLKAVSHCKNLQELNVSDCQSLTDESMRHISEGCPGVLYLNLSNTTITNRTMRLLPRY 379
Query: 163 LQNLSVLDLGGL-PVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFL 217
NL L+L TD L+ L + KL YLDL G +Q+S +G F
Sbjct: 380 FPNLQNLNLAYCRKFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQG-----------FR 428
Query: 218 NLA--WTGVTKL-----PNISS-------LECLNLSFIQQVGAETDLVLSLTALQNLNHL 263
N+A TG+ L P ++ +CL +S + +G+ + AL + N L
Sbjct: 429 NIANSCTGIMHLTINDMPTLTDNCVKVLVEKCLQISTVVFIGSPHISDCAFKALTSCN-L 487
Query: 264 ERLNLE-QTQVSDATL-FPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV 320
+++ E +++DA + + + H+ + + +LTD SL LS L +LT L++ + +
Sbjct: 488 KKIRFEGNKRITDACFKYIDKNYPGINHIYMVDCKTLTDSSLKSLSVLKQLTVLNLTNCI 547
Query: 321 -LTNSGLGSF-KPPRSLKL--LDLHGGWLLTEDAILQFCKMHPRIEVWHELSV 369
++++GL F S+K+ L+L+ L+ + AI+ K+ R H LS+
Sbjct: 548 RISDAGLRQFLDGSVSVKIRELNLNNCSLVGDPAIV---KLSERCTNLHYLSL 597
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 131/289 (45%), Gaps = 27/289 (9%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLK--ELDLSRCVKVTDAGMKHLL-SISTLEK 144
F L++LN+A CR+ T L L G C K LDLS C +++ G +++ S + +
Sbjct: 380 FPNLQNLNLAYCRKFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRNIANSCTGIMH 439
Query: 145 LWLSET-GLTADGIALL--SSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVS 201
L +++ LT + + +L LQ +V+ +G ++D ++L L+ + G++
Sbjct: 440 LTINDMPTLTDNCVKVLVEKCLQISTVVFIGSPHISDCAFKALTS-CNLKKIRFEGNKRI 498
Query: 202 NRGA--AVLKMFPRLSFL------NLAWTGVTKLPNISSLECLNLSF---IQQVGAETDL 250
+ K +P ++ + L + + L + L LNL+ I G L
Sbjct: 499 TDACFKYIDKNYPGINHIYMVDCKTLTDSSLKSLSVLKQLTVLNLTNCIRISDAGLRQFL 558
Query: 251 VLSLTALQNLNHLERLNLEQTQ-VSDATLFPLST-FKELIHLSLRNAS-LTDVSLHQLSS 307
S++ + LNL V D + LS L +LSLRN LTD+++ +++
Sbjct: 559 DGSVSV-----KIRELNLNNCSLVGDPAIVKLSERCTNLHYLSLRNCEHLTDLAIECIAN 613
Query: 308 LSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 356
+ L ++ + +++ GL R L+ + L +T+ I FC+
Sbjct: 614 MQSLISIDLSGTSISHEGLALLSRHRKLREVSLSECTNITDMGIRAFCR 662
>gi|112961697|gb|ABI28484.1| internalin A [Listeria monocytogenes]
gi|112961709|gb|ABI28492.1| internalin A [Listeria monocytogenes]
gi|112961730|gb|ABI28506.1| internalin A [Listeria monocytogenes]
gi|112961760|gb|ABI28526.1| internalin A [Listeria monocytogenes]
Length = 751
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 112 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 167
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 168 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 221
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 222 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 276
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 277 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 314
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 86 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 143
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 144 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 194
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 195 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 238
>gi|85679236|gb|ABC72034.1| InlA [Listeria monocytogenes]
Length = 794
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 215
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 269
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 270 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 324
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 325 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 362
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 134 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 191
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 192 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 242
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 243 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 286
>gi|417301579|ref|ZP_12088730.1| conserved hypothetical protein, secreted [Rhodopirellula baltica
WH47]
gi|327542171|gb|EGF28664.1| conserved hypothetical protein, secreted [Rhodopirellula baltica
WH47]
Length = 442
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 126/282 (44%), Gaps = 17/282 (6%)
Query: 43 DSLLRHLIRRRLIFPSLLEVFKHNAE--AIELRGENSVDAEWMAYLGAFRYLRSLNVADC 100
DS+ +RR + LE+ ++ AI+LR N DA M L + L + + +
Sbjct: 143 DSVQGLFLRRTGVTDEGLELLTGLSKLRAIDLRNTNIGDA-GMDSLAKIKTLIDVQL-EK 200
Query: 101 RRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALL 160
+VT L L + LK ++ + C + MK L TLE L + + +A L
Sbjct: 201 SKVTDEGLVKLAPLP-LKSINFNYCTTINGPTMKMLGQTPTLEYLQGDYSKINDASMAEL 259
Query: 161 SSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA 220
L L L + G VT ++ + L +L S V + G V+ P +++++++
Sbjct: 260 KGLSKLKRLRIRGCDVTGEGIQHIAGNKALARFELRDSSVDDDGLKVISQLPAVTYVDIS 319
Query: 221 W------TGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVS 274
G+ +L ++ L L L + + ET L +L +LE LNL+ T V+
Sbjct: 320 ECRLASPEGIAQLGKLTGLTYLGL-WETKTNDET-----LAGFGDLVNLEELNLKSTAVT 373
Query: 275 DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 316
D +L L +L L++ L D S +L+ L L ++++
Sbjct: 374 DESLPVLMKMTKLKTLNVAGTQLGDDSFLELAKLPNLKSMNV 415
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 106/238 (44%), Gaps = 17/238 (7%)
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
+ DAGM++L S+ L+ L L++T +T + + L ++ L L VTD L L L
Sbjct: 107 IDDAGMENLTSLPKLKYLTLADTAITDETLKTAGKLDSVQGLFLRRTGVTDEGLELLTGL 166
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK--------LPNISSLECLNLS 239
+KL +DL + + + G L L + L + VT LP L+ +N +
Sbjct: 167 SKLRAIDLRNTNIGDAGMDSLAKIKTLIDVQLEKSKVTDEGLVKLAPLP----LKSINFN 222
Query: 240 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 299
+ + T +L T LE L + ++++DA++ L +L L +R +T
Sbjct: 223 YCTTINGPTMKMLGQTP-----TLEYLQGDYSKINDASMAELKGLSKLKRLRIRGCDVTG 277
Query: 300 VSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKM 357
+ ++ L +RD+ + + GL ++ +D+ L + + I Q K+
Sbjct: 278 EGIQHIAGNKALARFELRDSSVDDDGLKVISQLPAVTYVDISECRLASPEGIAQLGKL 335
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 94/222 (42%), Gaps = 28/222 (12%)
Query: 77 SVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHL 136
+++ M LG L L D ++ +++ L G++ LK L + C VT G++H+
Sbjct: 226 TINGPTMKMLGQTPTLEYLQ-GDYSKINDASMAELKGLSKLKRLRIRGC-DVTGEGIQHI 283
Query: 137 LSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV-TDLVLRSLQVLTKLEYLDL 195
L + L ++ + DG+ ++S L ++ +D+ + + + L LT L YL L
Sbjct: 284 AGNKALARFELRDSSVDDDGLKVISQLPAVTYVDISECRLASPEGIAQLGKLTGLTYLGL 343
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLT 255
W ++ ++ A L LNL T VT SL
Sbjct: 344 WETKTNDETLAGFGDLVNLEELNLKSTAVTDE-------------------------SLP 378
Query: 256 ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 297
L + L+ LN+ TQ+ D + L+ L +++ N S+
Sbjct: 379 VLMKMTKLKTLNVAGTQLGDDSFLELAKLPNLKSMNVANTSI 420
>gi|322952096|gb|ADX21047.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|112961793|gb|ABI28548.1| internalin A [Listeria monocytogenes]
Length = 696
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 57 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 112
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 113 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 166
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 167 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 221
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 222 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 259
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 31 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 88
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 89 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 139
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 140 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 183
>gi|290979790|ref|XP_002672616.1| predicted protein [Naegleria gruberi]
gi|284086194|gb|EFC39872.1| predicted protein [Naegleria gruberi]
Length = 559
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/255 (18%), Positives = 119/255 (46%), Gaps = 11/255 (4%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + E + ++ L SL+++ ++ +++ M L L + ++ D G
Sbjct: 301 NEIGDEGVKFISKMEQLTSLDIS-GNQIGVGGAKSISEMKQLTFLQIFSN-RIGDEGANS 358
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ + L L + + +G+ +S ++ L+ LD+GG + +S+ + +L +L +
Sbjct: 359 ISEMKQLTSLNIYYNQIGDEGVKFISEMEQLTSLDIGGNQIGVGGAKSISEMKQLTFLQI 418
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWT--GVTKLPNISSLECLNLSFI--QQVGAETDLV 251
+ +++ + G + +L+ LN++ G +IS ++ L L +I ++G E
Sbjct: 419 FSNRIGDEGVKFISEMKQLTSLNISGNRIGDEGAKSISEMKQLTLLYISSNEIGDE---- 474
Query: 252 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ + + L L + ++ D + +S K+L L++ + D + +S + +L
Sbjct: 475 -GVKFISEMKQLTLLQIYSNRIGDEGVKSISEMKQLTSLNISGNRIGDEGVKSISEMKQL 533
Query: 312 TNLSIRDAVLTNSGL 326
T+L+I + + + G+
Sbjct: 534 TSLNISNNRIGDEGV 548
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 102/218 (46%), Gaps = 13/218 (5%)
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
K + + L L ++E + +G+ +S ++ L++LD+ + S+ + +L L
Sbjct: 117 KFISEMKQLTSLGIAENRIGDEGVKFISEMKQLTLLDICCNEIGVEGATSISEMKQLTSL 176
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLA-----WTGVTKLPNISSLECLNLSFIQQVGAET 248
++ G+++ + GA ++ +L+ LN+A G + + L L++S ++G
Sbjct: 177 NISGNRIGDEGAKLISEMKQLTLLNIADNRICVEGAKSISEMKQLTSLSISD-NEIG--- 232
Query: 249 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV-SLHQLSS 307
V+ + +N L LN+ ++ D +S K+LI L + N +L D+ +S
Sbjct: 233 --VVGAKLISEMNQLTLLNISNNEIGDEGAKFISEMKQLISLDISN-NLIDIEGAKSISE 289
Query: 308 LSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 345
+ +LT+L I + + G+ L LD+ G +
Sbjct: 290 MKQLTSLEIYYNEIGDEGVKFISKMEQLTSLDISGNQI 327
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/279 (19%), Positives = 125/279 (44%), Gaps = 15/279 (5%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + E ++ + L SL++++ + +++ M L L++ ++ D G+K
Sbjct: 253 NEIGDEGAKFISEMKQLISLDISN-NLIDIEGAKSISEMKQLTSLEIYYN-EIGDEGVKF 310
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ + L L +S + G +S ++ L+ L + + D S+ + +L L++
Sbjct: 311 ISKMEQLTSLDISGNQIGVGGAKSISEMKQLTFLQIFSNRIGDEGANSISEMKQLTSLNI 370
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWT--GVTKLPNISSLECLNLSFIQ----QVGAETD 249
+ +Q+ + G + +L+ L++ GV +IS ++ L+F+Q ++G E
Sbjct: 371 YYNQIGDEGVKFISEMEQLTSLDIGGNQIGVGGAKSISEMK--QLTFLQIFSNRIGDE-- 426
Query: 250 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 309
+ + + L LN+ ++ D +S K+L L + + + D + +S +
Sbjct: 427 ---GVKFISEMKQLTSLNISGNRIGDEGAKSISEMKQLTLLYISSNEIGDEGVKFISEMK 483
Query: 310 KLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 348
+LT L I + + G+ S + L L++ G + E
Sbjct: 484 QLTLLQIYSNRIGDEGVKSISEMKQLTSLNISGNRIGDE 522
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/133 (20%), Positives = 67/133 (50%), Gaps = 2/133 (1%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + E + ++ + L SLN++ R+ +++ M L L +S ++ D G+K
Sbjct: 421 NRIGDEGVKFISEMKQLTSLNIS-GNRIGDEGAKSISEMKQLTLLYISSN-EIGDEGVKF 478
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ + L L + + +G+ +S ++ L+ L++ G + D ++S+ + +L L++
Sbjct: 479 ISEMKQLTLLQIYSNRIGDEGVKSISEMKQLTSLNISGNRIGDEGVKSISEMKQLTSLNI 538
Query: 196 WGSQVSNRGAAVL 208
+++ + G +L
Sbjct: 539 SNNRIGDEGVKLL 551
>gi|119584856|gb|EAW64452.1| F-box and leucine-rich repeat protein 2, isoform CRA_a [Homo
sapiens]
Length = 425
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 161/342 (47%), Gaps = 26/342 (7%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC-LKELDLSRCVK 127
+ LRG V D+ + R + LN+ C ++T S ++L+ LK LDL+ CV
Sbjct: 85 LSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVS 144
Query: 128 VTDAGMKHLL-SISTLEKLWLSETG-LTADGI-ALLSSLQNLSVLDLGGLP-VTDLVLRS 183
+T++ +K + LE L LS +T DGI AL+ + L L L G + D L+
Sbjct: 145 ITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKH 204
Query: 184 LQ-VLTKLEYLDLWG-SQVSNRGAA-VLKMFPRLSFLNLAWTGVTKLPNIS----SLECL 236
+Q +L L+L S++++ G + + RL L L +G + L + S L C
Sbjct: 205 IQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCL--SGCSNLTDASLTALGLNCP 262
Query: 237 NLSFIQQVGAE--TDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTF-KELIHLSL 292
L ++ TD +L A +N + LE+++LE+ ++D+TL LS +L LSL
Sbjct: 263 RLQILEAARCSHLTDAGFTLLA-RNCHELEKMDLEECILITDSTLIQLSIHCPKLQALSL 321
Query: 293 RNASL-TDVSLHQLSSLS----KLTNLSIRDAVL-TNSGLGSFKPPRSLKLLDLHGGWLL 346
+ L TD + LS+ + +L L + + +L T+ L + R L+ L+L+ +
Sbjct: 322 SHCELITDDGILHLSNSTCGHERLRVLELDNCLLITDVALEHLENCRGLERLELYDCQQV 381
Query: 347 TEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSL 388
T I + P ++V + + P + +G R +
Sbjct: 382 TRAGIKRMRAQLPHVKVHAYFAPVTPPTAVAGSGQRLCRCCV 423
>gi|22347566|gb|AAM95928.1| internalin A precursor [Listeria monocytogenes]
Length = 746
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 105 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 160
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 161 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 214
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 215 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 269
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 270 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 307
Score = 44.7 bits (104), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 79 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 136
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 137 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 187
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 188 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 231
>gi|290973418|ref|XP_002669445.1| predicted protein [Naegleria gruberi]
gi|284082993|gb|EFC36701.1| predicted protein [Naegleria gruberi]
Length = 280
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 104/229 (45%), Gaps = 26/229 (11%)
Query: 139 ISTLEKLWLSETG---LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
IS +++L L G + +G ++S ++ L+ LD+GG ++D RS+ + +L +LD+
Sbjct: 22 ISEMKQLTLLNIGTNEIGDEGAIMISEMKQLTFLDIGGNQISDEGARSISKMRQLTFLDI 81
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLN------------- 237
+G+ + ++GA + +L+ LN+ G + + L L+
Sbjct: 82 YGNGIGDKGAKSISEMQQLTLLNIGGNQIGDEGAKLISQMKQLTFLDIYCNEIDVEGAKC 141
Query: 238 LSFIQQ-----VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL 292
+S +QQ +G+ V + L + L LN+ + + D +S K+L L +
Sbjct: 142 ISEMQQLTSLNIGSNEIGVEGVKFLSEMQQLTSLNIGENLIGDEGAKLISQMKQLTFLDI 201
Query: 293 RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 341
+ +S + +LT+L+I + + + G + L LD++
Sbjct: 202 YCNEIGVEGAKSISEMQQLTSLNIGENGIGDEGAKLISEMKQLTFLDIY 250
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/149 (20%), Positives = 68/149 (45%), Gaps = 2/149 (1%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + + + + L LN+ ++ ++ M L LD+ C ++ G K
Sbjct: 84 NGIGDKGAKSISEMQQLTLLNIGG-NQIGDEGAKLISQMKQLTFLDI-YCNEIDVEGAKC 141
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ + L L + + +G+ LS +Q L+ L++G + D + + + +L +LD+
Sbjct: 142 ISEMQQLTSLNIGSNEIGVEGVKFLSEMQQLTSLNIGENLIGDEGAKLISQMKQLTFLDI 201
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGV 224
+ +++ GA + +L+ LN+ G+
Sbjct: 202 YCNEIGVEGAKSISEMQQLTSLNIGENGI 230
>gi|167862032|gb|ACA05715.1| InlA [Listeria monocytogenes]
Length = 800
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|219821390|gb|ACL37838.1| internalin A [Listeria monocytogenes]
Length = 744
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 103 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 158
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 159 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 212
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 213 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 267
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 268 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 305
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 77 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 134
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 135 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 186 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 229
>gi|148607496|gb|ABQ95524.1| InlA [Listeria monocytogenes]
Length = 730
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 118/223 (52%), Gaps = 19/223 (8%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNL 268
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLEL 324
Query: 269 EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 325 NENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|47092503|ref|ZP_00230292.1| internalin A [Listeria monocytogenes str. 4b H7858]
gi|417314487|ref|ZP_12101186.1| internalin A [Listeria monocytogenes J1816]
gi|47019095|gb|EAL09839.1| internalin A [Listeria monocytogenes str. 4b H7858]
gi|130774783|gb|ABO32406.1| InlA [Listeria monocytogenes]
gi|130774787|gb|ABO32408.1| InlA [Listeria monocytogenes]
gi|167861878|gb|ACA05638.1| InlA [Listeria monocytogenes]
gi|167861926|gb|ACA05662.1| InlA [Listeria monocytogenes]
gi|194239406|emb|CAQ76843.1| internalin A [Listeria monocytogenes]
gi|223006800|gb|ACM69357.1| internalin A [Listeria monocytogenes]
gi|223006808|gb|ACM69361.1| internalin A [Listeria monocytogenes]
gi|294358399|gb|ADE73852.1| InlA [Listeria monocytogenes]
gi|298359958|gb|ADI77558.1| internalin A [Listeria monocytogenes]
gi|298359988|gb|ADI77573.1| internalin A [Listeria monocytogenes]
gi|298360010|gb|ADI77584.1| internalin A [Listeria monocytogenes]
gi|298360208|gb|ADI77683.1| internalin A [Listeria monocytogenes]
gi|298360370|gb|ADI77764.1| internalin A [Listeria monocytogenes]
gi|298360402|gb|ADI77780.1| internalin A [Listeria monocytogenes]
gi|298360472|gb|ADI77815.1| internalin A [Listeria monocytogenes]
gi|298360544|gb|ADI77851.1| internalin A [Listeria monocytogenes]
gi|298360592|gb|ADI77875.1| internalin A [Listeria monocytogenes]
gi|328467733|gb|EGF38785.1| internalin A [Listeria monocytogenes J1816]
gi|443428820|gb|AGC92209.1| truncated internalin A [Listeria monocytogenes]
gi|443428844|gb|AGC92221.1| truncated internalin A [Listeria monocytogenes]
gi|443428846|gb|AGC92222.1| truncated internalin A [Listeria monocytogenes]
gi|443428850|gb|AGC92224.1| truncated internalin A [Listeria monocytogenes]
gi|443428854|gb|AGC92226.1| truncated internalin A [Listeria monocytogenes]
gi|443428856|gb|AGC92227.1| truncated internalin A [Listeria monocytogenes]
Length = 797
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|17647819|ref|NP_523812.1| partner of paired, isoform A [Drosophila melanogaster]
gi|194884489|ref|XP_001976275.1| GG20101 [Drosophila erecta]
gi|10441427|gb|AAG17034.1|AF187980_1 Partner of Paired [Drosophila melanogaster]
gi|7291460|gb|AAF46886.1| partner of paired, isoform A [Drosophila melanogaster]
gi|21430560|gb|AAM50958.1| RE01138p [Drosophila melanogaster]
gi|190659462|gb|EDV56675.1| GG20101 [Drosophila erecta]
gi|220947678|gb|ACL86382.1| CG9952-PA [synthetic construct]
gi|220957060|gb|ACL91073.1| ppa-PA [synthetic construct]
Length = 538
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 97/184 (52%), Gaps = 14/184 (7%)
Query: 92 LRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET 150
L L + DC+R++ AL + G+T LK ++LS CV VTD+G+KHL + LE+L L
Sbjct: 348 LEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDSGLKHLARMPKLEQLNLRSC 407
Query: 151 GLTAD-GIALLS-SLQNLSVLDLGGL-PVTDLVLRSL-QVLTKLEYLDLWGSQVSNRGA- 205
+D G+A L+ ++ LD+ ++D L + Q L +L L L Q+++ G
Sbjct: 408 DNISDIGMAYLTEGGSGINSLDVSFCDKISDQALTHIAQGLYRLRSLSLNQCQITDHGML 467
Query: 206 AVLKMFPRLSFLNLAWT------GVTKLP-NISSLECLNLSFIQQVGAE-TDLVLSLTAL 257
+ K L LN+ G+ L ++++L+ ++L Q+ ++ D+++ L L
Sbjct: 468 KIAKALHELENLNIGQCSRITDKGLQTLAEDLTNLKTIDLYGCTQLSSKGIDIIMKLPKL 527
Query: 258 QNLN 261
Q LN
Sbjct: 528 QKLN 531
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 111/250 (44%), Gaps = 49/250 (19%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSIS------- 140
R L +L + C +T++ L + G+ LK L+L C ++D G+ HL S
Sbjct: 286 LRNLETLELGGCCNITNTGLLLIAWGLKKLKHLNLRSCWHISDQGIGHLAGFSRETAEGN 345
Query: 141 -TLEKLWLSET--------GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLE 191
LE L L + G A G+ L S+ NLS + VTD L+ L + KLE
Sbjct: 346 LQLEYLGLQDCQRLSDEALGHIAQGLTSLKSI-NLSFC----VSVTDSGLKHLARMPKLE 400
Query: 192 YLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDL 250
L+L +S+ G A +L +G+ L++SF ++ +D
Sbjct: 401 QLNLRSCDNISDIGMA---------YLTEGGSGINS---------LDVSFCDKI---SDQ 439
Query: 251 VLSLTALQNLNHLERLNLEQTQVSDATLFPLS-TFKELIHLSLRNAS-LTDVSLHQLSSL 308
L+ A Q L L L+L Q Q++D + ++ EL +L++ S +TD L L+
Sbjct: 440 ALTHIA-QGLYRLRSLSLNQCQITDHGMLKIAKALHELENLNIGQCSRITDKGLQTLA-- 496
Query: 309 SKLTNLSIRD 318
LTNL D
Sbjct: 497 EDLTNLKTID 506
>gi|158429248|pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 118/223 (52%), Gaps = 19/223 (8%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 129 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 184
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 185 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIGT--L 238
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNL 268
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 239 ASLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLEL 293
Query: 269 EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 294 NENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 332
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 104 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 161
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 162 FGN-QVTDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 212
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 213 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 256
>gi|371942110|gb|AEX60867.1| internaline [Listeria monocytogenes]
gi|371942112|gb|AEX60868.1| internaline [Listeria monocytogenes]
Length = 789
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|223698619|gb|ACN18986.1| truncated internalin A [Listeria monocytogenes]
gi|223698691|gb|ACN19034.1| truncated internalin A [Listeria monocytogenes]
gi|223698706|gb|ACN19044.1| truncated internalin A [Listeria monocytogenes]
gi|223698715|gb|ACN19050.1| truncated internalin A [Listeria monocytogenes]
gi|223698781|gb|ACN19094.1| truncated internalin A [Listeria monocytogenes]
gi|223698784|gb|ACN19096.1| truncated internalin A [Listeria monocytogenes]
gi|223698814|gb|ACN19116.1| truncated internalin A [Listeria monocytogenes]
gi|223698838|gb|ACN19132.1| truncated internalin A [Listeria monocytogenes]
gi|223698844|gb|ACN19136.1| truncated internalin A [Listeria monocytogenes]
gi|223698850|gb|ACN19140.1| truncated internalin A [Listeria monocytogenes]
gi|223698856|gb|ACN19144.1| truncated internalin A [Listeria monocytogenes]
gi|223698880|gb|ACN19160.1| truncated internalin A [Listeria monocytogenes]
gi|223698958|gb|ACN19212.1| truncated internalin A [Listeria monocytogenes]
gi|223698967|gb|ACN19218.1| truncated internalin A [Listeria monocytogenes]
gi|223698970|gb|ACN19220.1| truncated internalin A [Listeria monocytogenes]
gi|223698973|gb|ACN19222.1| truncated internalin A [Listeria monocytogenes]
gi|223698982|gb|ACN19228.1| truncated internalin A [Listeria monocytogenes]
Length = 614
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 76 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 131
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 132 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 185
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 186 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 240
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 241 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 278
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 50 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 107
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 108 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 158
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 159 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 202
>gi|223698610|gb|ACN18980.1| internalin A [Listeria monocytogenes]
gi|223698616|gb|ACN18984.1| internalin A [Listeria monocytogenes]
gi|223698631|gb|ACN18994.1| internalin A [Listeria monocytogenes]
gi|223698637|gb|ACN18998.1| internalin A [Listeria monocytogenes]
gi|223698640|gb|ACN19000.1| internalin A [Listeria monocytogenes]
gi|223698649|gb|ACN19006.1| internalin A [Listeria monocytogenes]
gi|223698652|gb|ACN19008.1| internalin A [Listeria monocytogenes]
gi|223698661|gb|ACN19014.1| internalin A [Listeria monocytogenes]
gi|223698667|gb|ACN19018.1| internalin A [Listeria monocytogenes]
gi|223698676|gb|ACN19024.1| internalin A [Listeria monocytogenes]
gi|223698679|gb|ACN19026.1| internalin A [Listeria monocytogenes]
gi|223698685|gb|ACN19030.1| internalin A [Listeria monocytogenes]
gi|223698688|gb|ACN19032.1| internalin A [Listeria monocytogenes]
gi|223698709|gb|ACN19046.1| internalin A [Listeria monocytogenes]
gi|223698721|gb|ACN19054.1| internalin A [Listeria monocytogenes]
gi|223698724|gb|ACN19056.1| internalin A [Listeria monocytogenes]
gi|223698727|gb|ACN19058.1| internalin A [Listeria monocytogenes]
gi|223698730|gb|ACN19060.1| internalin A [Listeria monocytogenes]
gi|223698733|gb|ACN19062.1| internalin A [Listeria monocytogenes]
gi|223698742|gb|ACN19068.1| internalin A [Listeria monocytogenes]
gi|223698763|gb|ACN19082.1| internalin A [Listeria monocytogenes]
gi|223698790|gb|ACN19100.1| internalin A [Listeria monocytogenes]
gi|223698808|gb|ACN19112.1| internalin A [Listeria monocytogenes]
gi|223698811|gb|ACN19114.1| internalin A [Listeria monocytogenes]
gi|223698823|gb|ACN19122.1| internalin A [Listeria monocytogenes]
gi|223698853|gb|ACN19142.1| internalin A [Listeria monocytogenes]
gi|223698874|gb|ACN19156.1| internalin A [Listeria monocytogenes]
gi|223698889|gb|ACN19166.1| internalin A [Listeria monocytogenes]
gi|223698949|gb|ACN19206.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 76 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 131
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 132 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 185
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 186 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 240
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 241 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 278
Score = 44.7 bits (104), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 50 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 107
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 108 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 158
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 159 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 202
>gi|223006806|gb|ACM69360.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|340052071|emb|CBY84387.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|322952083|gb|ADX21041.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|313485075|gb|ADR53008.1| InlA [Listeria monocytogenes]
Length = 800
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|145687803|gb|ABP88874.1| truncated internalin A precursor [Listeria monocytogenes]
gi|145687809|gb|ABP88877.1| truncated internalin A precursor [Listeria monocytogenes]
gi|194326155|emb|CAQ77236.1| internalin A [Listeria monocytogenes]
gi|294358379|gb|ADE73842.1| truncated InlA [Listeria monocytogenes]
gi|294358381|gb|ADE73843.1| truncated InlA [Listeria monocytogenes]
gi|294358383|gb|ADE73844.1| truncated InlA [Listeria monocytogenes]
gi|294358385|gb|ADE73845.1| truncated InlA [Listeria monocytogenes]
gi|298359890|gb|ADI77524.1| truncated internalin A [Listeria monocytogenes]
gi|298359938|gb|ADI77548.1| truncated internalin A [Listeria monocytogenes]
gi|298359960|gb|ADI77559.1| truncated internalin A [Listeria monocytogenes]
gi|298360012|gb|ADI77585.1| truncated internalin A [Listeria monocytogenes]
gi|371942072|gb|AEX60848.1| truncated internaline [Listeria monocytogenes]
gi|371942094|gb|AEX60859.1| truncated internaline [Listeria monocytogenes]
gi|371942120|gb|AEX60872.1| truncated internaline [Listeria monocytogenes]
gi|371942130|gb|AEX60877.1| truncated internaline [Listeria monocytogenes]
Length = 491
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 119/226 (52%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIGT 268
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++ + + +++ L L L
Sbjct: 269 --LASLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTN 321
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 322 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TDL L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDL--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|112959500|gb|ABI27277.1| internalin A [Listeria monocytogenes]
gi|112959502|gb|ABI27278.1| internalin A [Listeria monocytogenes]
gi|112959510|gb|ABI27282.1| internalin A [Listeria monocytogenes]
gi|112959512|gb|ABI27283.1| internalin A [Listeria monocytogenes]
gi|112959524|gb|ABI27289.1| internalin A [Listeria monocytogenes]
gi|112959530|gb|ABI27292.1| internalin A [Listeria monocytogenes]
Length = 737
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 98 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 153
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 154 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 207
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 208 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 262
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 263 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 300
Score = 44.7 bits (104), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 72 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 129
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 130 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 180
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 181 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 224
>gi|430741732|ref|YP_007200861.1| hypothetical protein Sinac_0756 [Singulisphaera acidiphila DSM
18658]
gi|430013452|gb|AGA25166.1| hypothetical protein Sinac_0756 [Singulisphaera acidiphila DSM
18658]
Length = 304
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 107/234 (45%), Gaps = 28/234 (11%)
Query: 140 STLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQ 199
+TL ++ +S+ TA + + LQ L+++ G+ +TD L L L +L + + +
Sbjct: 82 ATLPQVPISDEAFTA--LGMFDQLQELTMVV--GV-MTDTGLAQLGGLPRLRQVYCFKPK 136
Query: 200 VSNRGAAVLKMFPRLSFLNLAWT------GVTKLPNISSLECLNLSFIQQVGAETDLVLS 253
V+N G A LK L L L G+ L +++LE LNLS + G
Sbjct: 137 VTNAGLAHLKGATHLVSLELLRVPEITDEGLVHLAGLTNLEKLNLSGARIAGP------- 189
Query: 254 LTALQNLNHLERLNLEQTQV----SDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 309
L HL RL +T V +DA L L F L L L TD L +LS L
Sbjct: 190 -----GLPHLARLGRLRTLVLGSTTDAGLAQLGRFTNLKQLYLGTGKYTDAGLAELSKLR 244
Query: 310 KLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEV 363
LT L + LT + L +L+ LDL GG +++ AI +F + P++ +
Sbjct: 245 SLTELGLEAGDLTEAVLIHVAGLPNLERLDL-GGAPVSQAAIEKFKRARPQVRI 297
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 106/246 (43%), Gaps = 31/246 (12%)
Query: 91 YLRSLNVADCRRVTSS--ALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
Y S+N A +V S A AL L+EL + V +TD G+ L + L +++
Sbjct: 75 YGGSINPATLPQVPISDEAFTALGMFDQLQELTMVVGV-MTDTGLAQLGGLPRLRQVYCF 133
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAV 207
+ +T G+A L +L L+L +P +TD L L LT LE L+L G++++ G
Sbjct: 134 KPKVTNAGLAHLKGATHLVSLELLRVPEITDEGLVHLAGLTNLEKLNLSGARIAGPGLPH 193
Query: 208 LKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLN 267
L RL L L G+ TD L L +L++L
Sbjct: 194 LARLGRLRTLVL-------------------------GSTTD--AGLAQLGRFTNLKQLY 226
Query: 268 LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLG 327
L + +DA L LS + L L L LT+ L ++ L L L + A ++ + +
Sbjct: 227 LGTGKYTDAGLAELSKLRSLTELGLEAGDLTEAVLIHVAGLPNLERLDLGGAPVSQAAIE 286
Query: 328 SFKPPR 333
FK R
Sbjct: 287 KFKRAR 292
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 85/196 (43%), Gaps = 28/196 (14%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+A LG LR + + VT++ L L G T L L+L R ++TD G+ HL ++ L
Sbjct: 118 LAQLGGLPRLRQVYCFKPK-VTNAGLAHLKGATHLVSLELLRVPEITDEGLVHLAGLTNL 176
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
EKL LS + G+ L+ L L L LG TD L L T L+ L L + ++
Sbjct: 177 EKLNLSGARIAGPGLPHLARLGRLRTLVLG--STTDAGLAQLGRFTNLKQLYLGTGKYTD 234
Query: 203 RGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNH 262
G A L L+ L L + G T+ VL A L +
Sbjct: 235 AGLAELSKLRSLTELGL-----------------------EAGDLTEAVLIHVA--GLPN 269
Query: 263 LERLNLEQTQVSDATL 278
LERL+L VS A +
Sbjct: 270 LERLDLGGAPVSQAAI 285
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 70/152 (46%), Gaps = 24/152 (15%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC----------------- 125
+A+L +L SL + +T L L G+T L++L+LS
Sbjct: 142 LAHLKGATHLVSLELLRVPEITDEGLVHLAGLTNLEKLNLSGARIAGPGLPHLARLGRLR 201
Query: 126 ----VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVL 181
TDAG+ L + L++L+L T G+A LS L++L+ L L +T+ VL
Sbjct: 202 TLVLGSTTDAGLAQLGRFTNLKQLYLGTGKYTDAGLAELSKLRSLTELGLEAGDLTEAVL 261
Query: 182 RSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPR 213
+ L LE LDL G+ VS A ++ F R
Sbjct: 262 IHVAGLPNLERLDLGGAPVSQ---AAIEKFKR 290
>gi|167862030|gb|ACA05714.1| InlA [Listeria monocytogenes]
Length = 576
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 118/223 (52%), Gaps = 19/223 (8%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIGT--L 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNL 268
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLEL 324
Query: 269 EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 325 NENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNHITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|223698883|gb|ACN19162.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 76 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 131
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 132 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 185
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 186 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 240
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 241 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 278
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 50 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 107
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 108 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 158
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 159 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 202
>gi|219821372|gb|ACL37826.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 103 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 158
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 159 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 212
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 213 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 267
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 268 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 305
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 77 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 134
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 135 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 186 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 229
>gi|125538510|gb|EAY84905.1| hypothetical protein OsI_06273 [Oryza sativa Indica Group]
Length = 653
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 140/299 (46%), Gaps = 39/299 (13%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMT-CLKELDLSRCVKVTDAGMKHLL-SIS 140
MA + LR ++V C VT+ AL A+ L++L +C +TDAG+K S
Sbjct: 350 MANAAGLQNLRCMSVTSCPGVTNLALAAIAKFCPSLRQLSFRKCGHMTDAGLKAFTESAR 409
Query: 141 TLEKLWLSET-GLTADGI-----------ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLT 188
LE L L E G+T GI LS ++ + + D+ P + +SLQ LT
Sbjct: 410 LLESLQLEECNGVTLVGILDFLVNCGPKFRSLSLVKCMGIKDICSTPARLPLCKSLQFLT 469
Query: 189 KLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA----WTGVTKLPNISSLEC----LNLSF 240
+ D + + A V + P L ++L+ T LP I+S E ++LS
Sbjct: 470 IKDCPDFTDASL----AVVGMVCPYLEQVDLSRLREVTDRGLLPLINSSEGGLVKVDLSG 525
Query: 241 IQQVGAETDLVLSLTALQNLNHLERLNLEQ-TQVSDATLFPLS-TFKELIHLSLRNASLT 298
+ + TD +S + L++++LE ++++DA+LF +S EL L L ++
Sbjct: 526 CKNI---TDAAVSTLVKGHGKSLKQVSLEGCSKITDASLFAISENCTELAELDLSKCMVS 582
Query: 299 DVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKM 357
D + +++L+ +L +R VL+ SG P+S+ L G L E LQFC M
Sbjct: 583 D---NGVATLASAKHLKLR--VLSLSGCSKVT-PKSVSFLGNMGQSL--EGLNLQFCNM 633
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 88/180 (48%), Gaps = 19/180 (10%)
Query: 84 AYLGAFRYLRSLNVADCRRVTSSALWALTGMTC--LKELDLSRCVKVTDAGMKHLLSIST 141
A L + L+ L + DC T ++L A+ GM C L+++DLSR +VTD G+ L++ S
Sbjct: 457 ARLPLCKSLQFLTIKDCPDFTDASL-AVVGMVCPYLEQVDLSRLREVTDRGLLPLINSSE 515
Query: 142 LEKLWLSETGLTADGIALLSSL-----QNLSVLDLGGL-PVTDLVLRSL-QVLTKLEYLD 194
+ + +G A +S+L ++L + L G +TD L ++ + T+L LD
Sbjct: 516 GGLVKVDLSGCKNITDAAVSTLVKGHGKSLKQVSLEGCSKITDASLFAISENCTELAELD 575
Query: 195 LWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNIS---------SLECLNLSFIQQVG 245
L VS+ G A L L L+ +G +K+ S SLE LNL F +G
Sbjct: 576 LSKCMVSDNGVATLASAKHLKLRVLSLSGCSKVTPKSVSFLGNMGQSLEGLNLQFCNMIG 635
>gi|167861908|gb|ACA05653.1| InlA [Listeria monocytogenes]
Length = 800
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|167861906|gb|ACA05652.1| InlA [Listeria monocytogenes]
Length = 800
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|130774809|gb|ABO32417.1| InlA [Listeria monocytogenes]
Length = 800
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|126143308|gb|ABN80096.1| InlA [Listeria monocytogenes]
Length = 800
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|27574254|pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
gi|27574256|pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
gi|27574257|pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
gi|27574258|pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 118/223 (52%), Gaps = 19/223 (8%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 130 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 185
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 186 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIGT--L 239
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNL 268
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 240 ASLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLEL 294
Query: 269 EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 295 NENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 333
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 105 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 162
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 163 FGN-QVTDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 213
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 214 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 257
>gi|167862002|gb|ACA05700.1| InlA [Listeria monocytogenes]
Length = 800
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|46906689|ref|YP_013078.1| internalin A [Listeria monocytogenes serotype 4b str. F2365]
gi|254932755|ref|ZP_05266114.1| internalin A [Listeria monocytogenes HPB2262]
gi|405748809|ref|YP_006672275.1| internalin A [Listeria monocytogenes ATCC 19117]
gi|405751670|ref|YP_006675135.1| internalin A [Listeria monocytogenes SLCC2378]
gi|417316727|ref|ZP_12103366.1| internalin A [Listeria monocytogenes J1-220]
gi|424713328|ref|YP_007014043.1| Internalin-A [Listeria monocytogenes serotype 4b str. LL195]
gi|424822183|ref|ZP_18247196.1| Internalin-A [Listeria monocytogenes str. Scott A]
gi|50400895|sp|Q723K6.1|INLA_LISMF RecName: Full=Internalin-A; Flags: Precursor
gi|46879954|gb|AAT03255.1| internalin A [Listeria monocytogenes serotype 4b str. F2365]
gi|130774757|gb|ABO32393.1| InlA [Listeria monocytogenes]
gi|130774763|gb|ABO32396.1| InlA [Listeria monocytogenes]
gi|130774781|gb|ABO32405.1| InlA [Listeria monocytogenes]
gi|130774785|gb|ABO32407.1| InlA [Listeria monocytogenes]
gi|130774789|gb|ABO32409.1| InlA [Listeria monocytogenes]
gi|167861870|gb|ACA05634.1| InlA [Listeria monocytogenes]
gi|167861880|gb|ACA05639.1| InlA [Listeria monocytogenes]
gi|167861882|gb|ACA05640.1| InlA [Listeria monocytogenes]
gi|167861884|gb|ACA05641.1| InlA [Listeria monocytogenes]
gi|167861886|gb|ACA05642.1| InlA [Listeria monocytogenes]
gi|167861896|gb|ACA05647.1| InlA [Listeria monocytogenes]
gi|167861898|gb|ACA05648.1| InlA [Listeria monocytogenes]
gi|167861910|gb|ACA05654.1| InlA [Listeria monocytogenes]
gi|167861912|gb|ACA05655.1| InlA [Listeria monocytogenes]
gi|167861952|gb|ACA05675.1| InlA [Listeria monocytogenes]
gi|167861958|gb|ACA05678.1| InlA [Listeria monocytogenes]
gi|167861960|gb|ACA05679.1| InlA [Listeria monocytogenes]
gi|167861966|gb|ACA05682.1| InlA [Listeria monocytogenes]
gi|167861988|gb|ACA05693.1| InlA [Listeria monocytogenes]
gi|167861996|gb|ACA05697.1| InlA [Listeria monocytogenes]
gi|167862008|gb|ACA05703.1| InlA [Listeria monocytogenes]
gi|167862010|gb|ACA05704.1| InlA [Listeria monocytogenes]
gi|167862014|gb|ACA05706.1| InlA [Listeria monocytogenes]
gi|167862016|gb|ACA05707.1| InlA [Listeria monocytogenes]
gi|194239380|emb|CAQ76830.1| internalin A [Listeria monocytogenes]
gi|194239394|emb|CAQ76837.1| internalin A [Listeria monocytogenes]
gi|194326167|emb|CAQ77242.1| internalin A [Listeria monocytogenes]
gi|223006786|gb|ACM69350.1| internalin A [Listeria monocytogenes]
gi|223006788|gb|ACM69351.1| internalin A [Listeria monocytogenes]
gi|223006798|gb|ACM69356.1| internalin A [Listeria monocytogenes]
gi|223006804|gb|ACM69359.1| internalin A [Listeria monocytogenes]
gi|223006810|gb|ACM69362.1| internalin A [Listeria monocytogenes]
gi|293584308|gb|EFF96340.1| internalin A [Listeria monocytogenes HPB2262]
gi|294358391|gb|ADE73848.1| InlA [Listeria monocytogenes]
gi|294358403|gb|ADE73854.1| InlA [Listeria monocytogenes]
gi|298359884|gb|ADI77521.1| internalin A [Listeria monocytogenes]
gi|298359898|gb|ADI77528.1| internalin A [Listeria monocytogenes]
gi|298359902|gb|ADI77530.1| internalin A [Listeria monocytogenes]
gi|298359908|gb|ADI77533.1| internalin A [Listeria monocytogenes]
gi|298359940|gb|ADI77549.1| internalin A [Listeria monocytogenes]
gi|298359948|gb|ADI77553.1| internalin A [Listeria monocytogenes]
gi|298360056|gb|ADI77607.1| internalin A [Listeria monocytogenes]
gi|298360094|gb|ADI77626.1| internalin A [Listeria monocytogenes]
gi|298360148|gb|ADI77653.1| internalin A [Listeria monocytogenes]
gi|298360270|gb|ADI77714.1| internalin A [Listeria monocytogenes]
gi|298360288|gb|ADI77723.1| internalin A [Listeria monocytogenes]
gi|298360324|gb|ADI77741.1| internalin A [Listeria monocytogenes]
gi|298360326|gb|ADI77742.1| internalin A [Listeria monocytogenes]
gi|298360350|gb|ADI77754.1| internalin A [Listeria monocytogenes]
gi|298360362|gb|ADI77760.1| internalin A [Listeria monocytogenes]
gi|298360456|gb|ADI77807.1| internalin A [Listeria monocytogenes]
gi|298360480|gb|ADI77819.1| internalin A [Listeria monocytogenes]
gi|298360508|gb|ADI77833.1| internalin A [Listeria monocytogenes]
gi|298360520|gb|ADI77839.1| internalin A [Listeria monocytogenes]
gi|298360554|gb|ADI77856.1| internalin A [Listeria monocytogenes]
gi|298360632|gb|ADI77895.1| internalin A [Listeria monocytogenes]
gi|298360634|gb|ADI77896.1| internalin A [Listeria monocytogenes]
gi|298360662|gb|ADI77910.1| internalin A [Listeria monocytogenes]
gi|328475915|gb|EGF46639.1| internalin A [Listeria monocytogenes J1-220]
gi|332310863|gb|EGJ23958.1| Internalin-A [Listeria monocytogenes str. Scott A]
gi|340052073|emb|CBY84388.1| internalin A [Listeria monocytogenes]
gi|340052075|emb|CBY84389.1| internalin A [Listeria monocytogenes]
gi|404218009|emb|CBY69373.1| internalin A (LPXTG motif) [Listeria monocytogenes ATCC 19117]
gi|404220870|emb|CBY72233.1| internalin A (LPXTG motif) [Listeria monocytogenes SLCC2378]
gi|424012512|emb|CCO63052.1| Internalin-A [Listeria monocytogenes serotype 4b str. LL195]
gi|443428812|gb|AGC92205.1| internalin A [Listeria monocytogenes]
gi|443428814|gb|AGC92206.1| internalin A [Listeria monocytogenes]
gi|443428816|gb|AGC92207.1| internalin A [Listeria monocytogenes]
gi|443428818|gb|AGC92208.1| internalin A [Listeria monocytogenes]
gi|443428826|gb|AGC92212.1| internalin A [Listeria monocytogenes]
gi|443428836|gb|AGC92217.1| internalin A [Listeria monocytogenes]
gi|443428840|gb|AGC92219.1| internalin A [Listeria monocytogenes]
gi|443428852|gb|AGC92225.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|16802477|ref|NP_463962.1| internalin A [Listeria monocytogenes EGD-e]
gi|386049359|ref|YP_005967350.1| internalin-A [Listeria monocytogenes FSL R2-561]
gi|404282867|ref|YP_006683764.1| internalin A [Listeria monocytogenes SLCC2372]
gi|403399437|sp|P0DJM0.1|INLA_LISMO RecName: Full=Internalin-A; Flags: Precursor
gi|12054782|emb|CAC20628.1| internalin A [Listeria monocytogenes]
gi|16409810|emb|CAC98512.1| Internalin A [Listeria monocytogenes EGD-e]
gi|130774817|gb|ABO32421.1| InlA [Listeria monocytogenes]
gi|130774821|gb|ABO32423.1| InlA [Listeria monocytogenes]
gi|130774823|gb|ABO32424.1| InlA [Listeria monocytogenes]
gi|150371782|dbj|BAF65680.1| internalin A [Listeria monocytogenes]
gi|150371794|dbj|BAF65686.1| internalin A [Listeria monocytogenes]
gi|150371804|dbj|BAF65691.1| internalin A [Listeria monocytogenes]
gi|150371820|dbj|BAF65699.1| internalin A [Listeria monocytogenes]
gi|150371846|dbj|BAF65712.1| internalin A [Listeria monocytogenes]
gi|150371852|dbj|BAF65715.1| internalin A [Listeria monocytogenes]
gi|150371856|dbj|BAF65717.1| internalin A [Listeria monocytogenes]
gi|150371860|dbj|BAF65719.1| internalin A [Listeria monocytogenes]
gi|150371868|dbj|BAF65723.1| internalin A [Listeria monocytogenes]
gi|167861980|gb|ACA05689.1| InlA [Listeria monocytogenes]
gi|194239382|emb|CAQ76831.1| internalin A [Listeria monocytogenes]
gi|298359818|gb|ADI77488.1| internalin A [Listeria monocytogenes]
gi|298359832|gb|ADI77495.1| internalin A [Listeria monocytogenes]
gi|298360054|gb|ADI77606.1| internalin A [Listeria monocytogenes]
gi|298360128|gb|ADI77643.1| internalin A [Listeria monocytogenes]
gi|298360212|gb|ADI77685.1| internalin A [Listeria monocytogenes]
gi|298360216|gb|ADI77687.1| internalin A [Listeria monocytogenes]
gi|298360256|gb|ADI77707.1| internalin A [Listeria monocytogenes]
gi|298360522|gb|ADI77840.1| internalin A [Listeria monocytogenes]
gi|346423205|gb|AEO24730.1| internalin-A [Listeria monocytogenes FSL R2-561]
gi|404232369|emb|CBY53772.1| internalin A (LPXTG motif) [Listeria monocytogenes SLCC2372]
Length = 800
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|148607492|gb|ABQ95522.1| InlA [Listeria monocytogenes]
Length = 800
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|443428838|gb|AGC92218.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|322952092|gb|ADX21045.1| internalin A [Listeria monocytogenes]
gi|322952094|gb|ADX21046.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|290981666|ref|XP_002673551.1| predicted protein [Naegleria gruberi]
gi|284087135|gb|EFC40807.1| predicted protein [Naegleria gruberi]
Length = 438
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 128/313 (40%), Gaps = 43/313 (13%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N + AE YL A L +L + +C R+ +++ M L LD+S + + G+
Sbjct: 111 GVNDICAEGAKYLVALNQLTNLGI-NCNRIGEEGAKSISEMKQLTNLDISNNY-IGETGV 168
Query: 134 KHLLSISTLEKLWLSETGL------------------------TADGIALLSSLQNLSVL 169
+++ + L L + E L A+G +S ++ L L
Sbjct: 169 EYVSEMGNLTTLTIIENNLRAEGCKKIRKLKQLTRLSIYDNKIGAEGAKFISEMEQLMFL 228
Query: 170 DLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
++ + + + L L LD+ +++ + GA + F +L+ L ++ + N
Sbjct: 229 EINNNSIRNEGTEYISQLGNLTELDISHNEIGSEGAKHISQFKQLTCLRFSYNKI----N 284
Query: 230 ISSLECLNLSFIQQVGAETDLVL--------SLTALQNLNHLERLNLEQTQVSDATLFPL 281
S E LS + Q+ TDL + S+ ++ NL L L L +SD +
Sbjct: 285 AESFEY--LSTLTQL---TDLRICSSSIGDDSIKSITNLKSLTILYLNGNNISDNGCKNI 339
Query: 282 STFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 341
S +L LS+ +++D LS L++LT L + + N G + LK L +
Sbjct: 340 SELTQLTDLSMALNNISDEGCKFLSQLTQLTELDVSYNRIGNIGAEYINEMKQLKHLAIQ 399
Query: 342 GGWLLTEDAILQF 354
+ E I Q
Sbjct: 400 ANNIRNESKIDQL 412
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 134/306 (43%), Gaps = 45/306 (14%)
Query: 69 AIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALW----ALTGMTCLKELDLS- 123
+IE+ G N + E + YL ++C+ +TS+ L+ + G + L +L L+
Sbjct: 36 SIEI-GYNRIGNEGVKYL-----------SECKELTSANLYGNNISAEGASYLTKLKLTN 83
Query: 124 ---RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLV 180
R ++ G K + +S L+ L + + A+G L +L L+ L + + +
Sbjct: 84 LDIRTNELGAEGAKFIGQLSQLKILNIGVNDICAEGAKYLVALNQLTNLGINCNRIGEEG 143
Query: 181 LRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-----NLAWTGVTKLPNISSLEC 235
+S+ + +L LD+ + + G + L+ L NL G K+ + L
Sbjct: 144 AKSISEMKQLTNLDISNNYIGETGVEYVSEMGNLTTLTIIENNLRAEGCKKIRKLKQLTR 203
Query: 236 LNLSFIQQVGAETD-----------LVLSLTALQN--------LNHLERLNLEQTQVSDA 276
L++ + ++GAE L ++ +++N L +L L++ ++
Sbjct: 204 LSI-YDNKIGAEGAKFISEMEQLMFLEINNNSIRNEGTEYISQLGNLTELDISHNEIGSE 262
Query: 277 TLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLK 336
+S FK+L L + S LS+L++LT+L I + + + + S +SL
Sbjct: 263 GAKHISQFKQLTCLRFSYNKINAESFEYLSTLTQLTDLRICSSSIGDDSIKSITNLKSLT 322
Query: 337 LLDLHG 342
+L L+G
Sbjct: 323 ILYLNG 328
>gi|223006796|gb|ACM69355.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|219821351|gb|ACL37812.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 103 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 158
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 159 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 212
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 213 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 267
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 268 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 305
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 77 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 134
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 135 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 186 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 229
>gi|405757422|ref|YP_006686698.1| internalin A protein InlA, N-terminal part, partial [Listeria
monocytogenes SLCC2479]
gi|145687805|gb|ABP88875.1| truncated internalin A precursor [Listeria monocytogenes]
gi|145687811|gb|ABP88878.1| truncated internalin A precursor [Listeria monocytogenes]
gi|145687813|gb|ABP88879.1| truncated internalin A precursor [Listeria monocytogenes]
gi|167861890|gb|ACA05644.1| InlA [Listeria monocytogenes]
gi|167861942|gb|ACA05670.1| InlA [Listeria monocytogenes]
gi|167861986|gb|ACA05692.1| InlA [Listeria monocytogenes]
gi|194326143|emb|CAQ77230.1| internalin A [Listeria monocytogenes]
gi|298359794|gb|ADI77476.1| truncated internalin A [Listeria monocytogenes]
gi|298359982|gb|ADI77570.1| truncated internalin A [Listeria monocytogenes]
gi|298360074|gb|ADI77616.1| truncated internalin A [Listeria monocytogenes]
gi|298360136|gb|ADI77647.1| truncated internalin A [Listeria monocytogenes]
gi|298360184|gb|ADI77671.1| truncated internalin A [Listeria monocytogenes]
gi|298360286|gb|ADI77722.1| truncated internalin A [Listeria monocytogenes]
gi|298360300|gb|ADI77729.1| truncated internalin A [Listeria monocytogenes]
gi|298360306|gb|ADI77732.1| truncated internalin A [Listeria monocytogenes]
gi|298360344|gb|ADI77751.1| truncated internalin A [Listeria monocytogenes]
gi|298360352|gb|ADI77755.1| truncated internalin A [Listeria monocytogenes]
gi|298360358|gb|ADI77758.1| truncated internalin A [Listeria monocytogenes]
gi|298360602|gb|ADI77880.1| truncated internalin A [Listeria monocytogenes]
gi|298360636|gb|ADI77897.1| truncated internalin A [Listeria monocytogenes]
gi|371942098|gb|AEX60861.1| truncated internaline [Listeria monocytogenes]
gi|371942122|gb|AEX60873.1| truncated internaline [Listeria monocytogenes]
gi|404235304|emb|CBY56706.1| similar to internalin A protein InlA, N-terminal part [Listeria
monocytogenes SLCC2479]
Length = 576
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 118/223 (52%), Gaps = 19/223 (8%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIGT--L 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNL 268
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLEL 324
Query: 269 EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 325 NENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|149674|gb|AAA25289.1| internalin [Listeria monocytogenes]
gi|22347564|gb|AAM95927.1| internalin A precursor [Listeria monocytogenes]
Length = 744
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 105 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 160
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 161 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 214
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 215 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 269
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 270 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 307
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 79 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 136
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 137 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 187
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 188 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 231
>gi|195585785|ref|XP_002082659.1| GD25110 [Drosophila simulans]
gi|194194668|gb|EDX08244.1| GD25110 [Drosophila simulans]
Length = 522
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 97/184 (52%), Gaps = 14/184 (7%)
Query: 92 LRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET 150
L L + DC+R++ AL + G+T LK ++LS CV VTD+G+KHL + LE+L L
Sbjct: 332 LEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDSGLKHLARMPKLEQLNLRSC 391
Query: 151 GLTAD-GIALLS-SLQNLSVLDLGGL-PVTDLVLRSL-QVLTKLEYLDLWGSQVSNRGA- 205
+D G+A L+ ++ LD+ ++D L + Q L +L L L Q+++ G
Sbjct: 392 DNISDIGMAYLTEGGSGINSLDVSFCDKISDQALTHIAQGLYRLRSLSLNQCQITDHGML 451
Query: 206 AVLKMFPRLSFLNLAWT------GVTKLP-NISSLECLNLSFIQQVGAE-TDLVLSLTAL 257
+ K L LN+ G+ L ++++L+ ++L Q+ ++ D+++ L L
Sbjct: 452 KIAKALHELENLNIGQCSRITDKGLQTLAEDLTNLKTIDLYGCTQLSSKGIDIIMKLPKL 511
Query: 258 QNLN 261
Q LN
Sbjct: 512 QKLN 515
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 111/250 (44%), Gaps = 49/250 (19%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSIS------- 140
R L +L + C +T++ L + G+ LK L+L C ++D G+ HL S
Sbjct: 270 LRNLETLELGGCCNITNTGLLLIAWGLKKLKHLNLRSCWHISDQGIGHLAGFSRETAEGN 329
Query: 141 -TLEKLWLSET--------GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLE 191
LE L L + G A G+ L S+ NLS + VTD L+ L + KLE
Sbjct: 330 LQLEYLGLQDCQRLSDEALGHIAQGLTSLKSI-NLSFC----VSVTDSGLKHLARMPKLE 384
Query: 192 YLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDL 250
L+L +S+ G A +L +G+ L++SF ++ +D
Sbjct: 385 QLNLRSCDNISDIGMA---------YLTEGGSGINS---------LDVSFCDKI---SDQ 423
Query: 251 VLSLTALQNLNHLERLNLEQTQVSDATLFPLS-TFKELIHLSLRNAS-LTDVSLHQLSSL 308
L+ A Q L L L+L Q Q++D + ++ EL +L++ S +TD L L+
Sbjct: 424 ALTHIA-QGLYRLRSLSLNQCQITDHGMLKIAKALHELENLNIGQCSRITDKGLQTLA-- 480
Query: 309 SKLTNLSIRD 318
LTNL D
Sbjct: 481 EDLTNLKTID 490
>gi|150371726|dbj|BAF65678.1| internalin A [Listeria monocytogenes]
gi|194326151|emb|CAQ77234.1| internalin A [Listeria monocytogenes]
gi|298360180|gb|ADI77669.1| internalin A [Listeria monocytogenes]
gi|298360390|gb|ADI77774.1| internalin A [Listeria monocytogenes]
gi|298360416|gb|ADI77787.1| internalin A [Listeria monocytogenes]
gi|298360620|gb|ADI77889.1| internalin A [Listeria monocytogenes]
gi|298360656|gb|ADI77907.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|130774769|gb|ABO32399.1| InlA [Listeria monocytogenes]
gi|130774773|gb|ABO32401.1| InlA [Listeria monocytogenes]
gi|167861932|gb|ACA05665.1| InlA [Listeria monocytogenes]
gi|167861992|gb|ACA05695.1| InlA [Listeria monocytogenes]
gi|167861994|gb|ACA05696.1| InlA [Listeria monocytogenes]
gi|167861998|gb|ACA05698.1| InlA [Listeria monocytogenes]
gi|167862004|gb|ACA05701.1| InlA [Listeria monocytogenes]
gi|167862034|gb|ACA05716.1| InlA [Listeria monocytogenes]
gi|194326169|emb|CAQ77243.1| internalin A [Listeria monocytogenes]
gi|298359894|gb|ADI77526.1| internalin A [Listeria monocytogenes]
gi|298360034|gb|ADI77596.1| internalin A [Listeria monocytogenes]
gi|298360110|gb|ADI77634.1| internalin A [Listeria monocytogenes]
gi|298360112|gb|ADI77635.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|85679230|gb|ABC72031.1| InlA [Listeria monocytogenes]
Length = 794
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 215
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 269
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 270 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 324
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 325 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 362
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 134 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 191
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 192 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 242
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 243 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 286
>gi|371942108|gb|AEX60866.1| truncated internaline [Listeria monocytogenes]
Length = 491
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 119/226 (52%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIGT 268
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++ + + +++ L L L
Sbjct: 269 --LASLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTN 321
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 322 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TDL L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDL--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|371942086|gb|AEX60855.1| truncated internaline [Listeria monocytogenes]
gi|371942128|gb|AEX60876.1| truncated internaline [Listeria monocytogenes]
Length = 491
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 119/226 (52%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIGT 268
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++ + + +++ L L L
Sbjct: 269 --LASLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTN 321
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 322 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TDL L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDL--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|332668444|ref|YP_004451232.1| Miro domain-containing protein [Haliscomenobacter hydrossis DSM
1100]
gi|332337258|gb|AEE54359.1| Miro domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 1058
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 113/236 (47%), Gaps = 25/236 (10%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
L +L D S L L + L +L++S V D + L + L +L+ SET
Sbjct: 59 LHNLTTLDLSSTPVSNLRPLAQLRNLTQLNISNT-HVKD--LSPLAQLYNLTELFASETK 115
Query: 152 LTADGIALLSSLQNLSVLDLGGLPVTDL-VLRSLQVLTKLEYLD---------LWGSQVS 201
++ ++ L+ L NL+ LD+ V+DL L L LT L+ + L+G+
Sbjct: 116 VS--DLSPLAQLHNLTTLDVSNSGVSDLSPLAQLHDLTTLDVSNSGDLSDTRWLFGNSTF 173
Query: 202 NRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLN-LSFIQQVGAETDLVLSLTALQNL 260
R V + P NL W +K P +S L L+ L + Q+ LV L L+ L
Sbjct: 174 YR-TDVSDLSPLTQLHNLTWLSFSKTP-VSDLTPLSQLHNLTQLFIYNTLVSDLRPLEQL 231
Query: 261 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 316
++L+RL++ T VSD L P+S + L L + N +++D LS L KL NL+I
Sbjct: 232 HNLDRLDVSNTTVSD--LSPVSQLQNLTKLYVYNTAVSD-----LSPLEKLYNLNI 280
>gi|219821342|gb|ACL37806.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 103 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 158
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 159 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 212
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 213 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLTGLTALTNLELN 267
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 268 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 305
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 77 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 134
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 135 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 186 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 229
>gi|298360550|gb|ADI77854.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|219821396|gb|ACL37842.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 103 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 158
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 159 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 212
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 213 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 267
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 268 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 305
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 77 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 134
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 135 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 186 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 229
>gi|219821330|gb|ACL37798.1| internalin A [Listeria monocytogenes]
gi|219821348|gb|ACL37810.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 103 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 158
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 159 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 212
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 213 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 267
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 268 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 305
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 77 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 134
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 135 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 186 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 229
>gi|219821264|gb|ACL37754.1| internalin A [Listeria monocytogenes]
gi|219821306|gb|ACL37782.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 103 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 158
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 159 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 212
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 213 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 267
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 268 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 305
Score = 44.7 bits (104), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 77 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 134
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 135 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 186 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 229
>gi|167861934|gb|ACA05666.1| InlA [Listeria monocytogenes]
gi|194326141|emb|CAQ77229.1| internalin A [Listeria monocytogenes]
Length = 538
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 118/223 (52%), Gaps = 19/223 (8%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIGT--L 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNL 268
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLEL 324
Query: 269 EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 325 NENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|29423714|gb|AAO73555.1| internalin A [Listeria monocytogenes]
Length = 743
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 104 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 159
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 160 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 213
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 214 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 268
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 269 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 306
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 78 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 135
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 136 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 186
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 187 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 230
>gi|148607482|gb|ABQ95519.1| InlA [Listeria monocytogenes]
Length = 800
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|371942116|gb|AEX60870.1| internaline [Listeria monocytogenes]
Length = 789
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|219821300|gb|ACL37778.1| internalin A [Listeria monocytogenes]
gi|219821378|gb|ACL37830.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 103 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 158
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 159 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 212
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 213 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 267
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 268 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 305
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 77 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 134
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 135 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 186 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 229
>gi|112961640|gb|ABI28446.1| truncated internalin A [Listeria monocytogenes]
gi|112961643|gb|ABI28448.1| truncated internalin A [Listeria monocytogenes]
gi|112961661|gb|ABI28460.1| truncated internalin A [Listeria monocytogenes]
Length = 556
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 118/223 (52%), Gaps = 19/223 (8%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 111 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDIS 166
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 167 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 220
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNL 268
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 221 ASLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLEL 275
Query: 269 EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 276 NENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 314
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 86 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 143
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 144 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 194
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 195 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 238
>gi|12581504|gb|AAG59625.1| GU1 [Trypanosoma brucei]
gi|261333153|emb|CBH16148.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 846
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 132/279 (47%), Gaps = 24/279 (8%)
Query: 77 SVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHL 136
+V + W+ L A RYL LNVA CR V + L+ + LK LDLS TD G ++L
Sbjct: 403 NVRSRWLESLRACRYLVELNVAYCRDVVEVSF--LSELRLLKHLDLSG----TDIGEQNL 456
Query: 137 LSISTLEKL--WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 194
I E L L + + + L +L+ L LD + D + + KLE+L
Sbjct: 457 DPIGQCEGLTFLLLKDCSSVKDLHFLETLRELVKLDTERTGIMDANVCQVVACKKLEFLS 516
Query: 195 LWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL-ECLNLSFIQQVGAETDLVLS 253
+ L+ L L+LA T VT ISSL +C++L ++ +E L+
Sbjct: 517 FRYCHLLT-DVKCLEGLRNLKTLDLAGTNVTN-EGISSLPKCVSLEYVDV--SECCLITH 572
Query: 254 LTALQNLNHLERLNLEQTQVSDA---TLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 310
L L+ L +L+++ +Q ++D T P S + ++ S R ++ +V L L
Sbjct: 573 LEFLRPLPNLQQVVADQMNLTDIGGLTGAP-SLRRVTLNESKRLGTVGEVRLPYLQE--- 628
Query: 311 LTNLSIRDAVLTNSGLGS-FKPPRSLKLLDLHGGWLLTE 348
LS+R + ++N+G+ S RSL+ LD+ +TE
Sbjct: 629 ---LSLRKSTISNAGIRSLLASCRSLQHLDMQHCHSVTE 664
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 62/146 (42%), Gaps = 26/146 (17%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
V E+M ++ + LR L + +C +T + L+ + L+++DLSR VT G+K L
Sbjct: 684 VTGEFMTHIASCVNLRKLQMTECADITD--VNCLSALQSLEDIDLSR-TSVTTEGIKGLS 740
Query: 138 SISTLEKLWLSE-----------------------TGLTADGIALLSSLQNLSVLDLGGL 174
L KL LSE T +T GIA LS+ L L L
Sbjct: 741 KCYALRKLNLSECRYVTNVNCLGKLPFLRELHLEKTNVTDKGIAGLSNCIQLETLALTKC 800
Query: 175 PVTDLVLRSLQVLTKLEYLDLWGSQV 200
V R L LE D++G+ V
Sbjct: 801 SRITNVERLHSSLPHLEEFDVYGTSV 826
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 102/251 (40%), Gaps = 58/251 (23%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ + LR +A + L + R L+ L++ C VT L AL+ + L+EL L R ++
Sbjct: 627 QELSLRKSTISNAGIRSLLASCRSLQHLDMQHCHSVTE--LSALSQLPNLREL-LLRNIR 683
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
VT M H+ S L KL ++E D + LS+LQ+L +DL VT
Sbjct: 684 VTGEFMTHIASCVNLRKLQMTECADITD-VNCLSALQSLEDIDLSRTSVTT--------- 733
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAE 247
G+ L +L LNLS E
Sbjct: 734 ----------------------------------EGIKGLSKCYALRKLNLS-------E 752
Query: 248 TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVS-LHQL 305
V ++ L L L L+LE+T V+D + LS +L L+L S +T+V LH
Sbjct: 753 CRYVTNVNCLGKLPFLRELHLEKTNVTDKGIAGLSNCIQLETLALTKCSRITNVERLH-- 810
Query: 306 SSLSKLTNLSI 316
SSL L +
Sbjct: 811 SSLPHLEEFDV 821
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 121/309 (39%), Gaps = 63/309 (20%)
Query: 57 PSLLEVFKHNAEAIELR-GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMT 115
P+ +E +EL +N V A R L+ L ++ CRRV S W L +T
Sbjct: 335 PTAVEFISSLGSLVELDLRDNWVGDAGCASFVHCRQLQQLKLSCCRRV-SDVRW-LAALT 392
Query: 116 CLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP 175
CL+ LDLS + + WL L + + L L++
Sbjct: 393 CLRTLDLSH---------------TNVRSRWLES----------LRACRYLVELNVA--Y 425
Query: 176 VTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLE 234
D+V S L L L++LDL G+ + G L I E
Sbjct: 426 CRDVVEVSFLSELRLLKHLDLSGTDI----------------------GEQNLDPIGQCE 463
Query: 235 CLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 294
L ++ + DL L+ L L +L+ E+T + DA + + K+L LS R
Sbjct: 464 GLTFLLLKDCSSVKDLHF----LETLRELVKLDTERTGIMDANVCQVVACKKLEFLSFRY 519
Query: 295 AS-LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQ 353
LTDV L L L L + +TN G+ S SL+ +D+ L+T L+
Sbjct: 520 CHLLTDVKC--LEGLRNLKTLDLAGTNVTNEGISSLPKCVSLEYVDVSECCLITH---LE 574
Query: 354 FCKMHPRIE 362
F + P ++
Sbjct: 575 FLRPLPNLQ 583
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
E I+L SV E + L LR LN+++CR VT+ + L + L+EL L +
Sbjct: 722 EDIDL-SRTSVTTEGIKGLSKCYALRKLNLSECRYVTN--VNCLGKLPFLRELHLEK-TN 777
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 176
VTD G+ L + LE L L++ + L SSL +L D+ G V
Sbjct: 778 VTDKGIAGLSNCIQLETLALTKCSRITNVERLHSSLPHLEEFDVYGTSV 826
Score = 38.5 bits (88), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 116/270 (42%), Gaps = 36/270 (13%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
+++V E M + R L SL V +C + ++L ++T + SR DA
Sbjct: 139 KSAVTNEMMHIVSMARDLESLTVRNCFSESEASLCSVTSIL------NSRATNRRDARTF 192
Query: 135 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLE--Y 192
+L +G+T+ G+ L+ L L L P+++ ++ T LE
Sbjct: 193 YL-------------SGVTSLGV-----LRCLRSLTLFATPLSNQIMSYFCECTNLERVV 234
Query: 193 LDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVL 252
+D VS A L+ LS LN T LP IS +C +L ++ +
Sbjct: 235 VDSCCGLVSLECFAALQRLTHLSVLNCTITD-EGLPPIS--KCFSLQYVMLDNCMK--LR 289
Query: 253 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFK--ELIHLSLRNASLTDVSLHQLSSLSK 310
SL L +L +L L + + ++ + + L + E++ S+ N ++ +SSL
Sbjct: 290 SLNCLGSLRNLRTLIVSRNRIPEEGVQGLRKLRDLEVLRFSVFNRP---TAVEFISSLGS 346
Query: 311 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
L L +RD + ++G SF R L+ L L
Sbjct: 347 LVELDLRDNWVGDAGCASFVHCRQLQQLKL 376
>gi|313485058|gb|ADR53003.1| InlA [Listeria monocytogenes]
Length = 765
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|223698871|gb|ACN19154.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 76 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 131
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 132 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 185
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 186 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 240
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 241 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 278
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 50 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 107
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 108 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 158
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 159 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 202
>gi|223698625|gb|ACN18990.1| internalin A [Listeria monocytogenes]
gi|223698736|gb|ACN19064.1| internalin A [Listeria monocytogenes]
gi|223698739|gb|ACN19066.1| internalin A [Listeria monocytogenes]
gi|223698847|gb|ACN19138.1| internalin A [Listeria monocytogenes]
gi|223698904|gb|ACN19176.1| internalin A [Listeria monocytogenes]
gi|223698955|gb|ACN19210.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 76 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 131
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 132 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 185
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 186 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 240
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 241 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 278
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 50 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 107
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 108 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 158
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 159 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 202
>gi|167861940|gb|ACA05669.1| InlA [Listeria monocytogenes]
gi|167861954|gb|ACA05676.1| InlA [Listeria monocytogenes]
gi|194239400|emb|CAQ76840.1| internalin A [Listeria monocytogenes]
gi|298360640|gb|ADI77899.1| truncated internalin A [Listeria monocytogenes]
gi|298360688|gb|ADI77923.1| truncated internalin A [Listeria monocytogenes]
gi|443428860|gb|AGC92229.1| truncated internalin A [Listeria monocytogenes]
gi|443428878|gb|AGC92238.1| truncated internalin A [Listeria monocytogenes]
Length = 684
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|112959468|gb|ABI27261.1| internalin A [Listeria monocytogenes]
Length = 730
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 91 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 146
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 147 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 200
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 201 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 255
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 256 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 293
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 65 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 122
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 123 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 173
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 174 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 217
>gi|422808574|ref|ZP_16856985.1| Internalin A [Listeria monocytogenes FSL J1-208]
gi|378752188|gb|EHY62773.1| Internalin A [Listeria monocytogenes FSL J1-208]
Length = 802
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|298360020|gb|ADI77589.1| truncated internalin A [Listeria monocytogenes]
gi|298360528|gb|ADI77843.1| truncated internalin A [Listeria monocytogenes]
Length = 459
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 118/223 (52%), Gaps = 19/223 (8%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIGT--L 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNL 268
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLEL 324
Query: 269 EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 325 NENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|371942136|gb|AEX60880.1| internaline [Listeria monocytogenes]
Length = 789
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|313485052|gb|ADR53000.1| InlA [Listeria monocytogenes]
Length = 771
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|219821318|gb|ACL37790.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 103 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 158
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 159 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 212
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 213 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 267
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 268 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 305
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 77 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 134
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 135 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 186 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 229
>gi|46447553|ref|YP_008918.1| hypothetical protein pc1919 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401194|emb|CAF24643.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 97
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 80 AEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSI 139
+ +A+L L+ L+++ C +T + LT +T L+ LDLS C K TD G+ HL +
Sbjct: 6 GDGLAHLAPLTALQHLDLSQCENLTDDGIAHLTSLTGLQHLDLSLCEKFTDDGLAHLAPL 65
Query: 140 STLEKLWLSET-GLTADGIALLSSLQNLSVLD 170
+ L+ L LS LT G+A L+ L L LD
Sbjct: 66 TALQHLNLSRCRNLTDAGLAHLTPLTALQYLD 97
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 101 RRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIAL 159
+ +T L L +T L+ LDLS+C +TD G+ HL S++ L+ L LS T DG+A
Sbjct: 2 QELTGDGLAHLAPLTALQHLDLSQCENLTDDGIAHLTSLTGLQHLDLSLCEKFTDDGLAH 61
Query: 160 LSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLD 194
L+ L L L+L +TD L L LT L+YLD
Sbjct: 62 LAPLTALQHLNLSRCRNLTDAGLAHLTPLTALQYLD 97
>gi|371942100|gb|AEX60862.1| internaline [Listeria monocytogenes]
Length = 789
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|255028812|ref|ZP_05300763.1| internalin A [Listeria monocytogenes LO28]
Length = 502
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 118/223 (52%), Gaps = 19/223 (8%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 152 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 207
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 208 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIGT--L 261
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNL 268
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 262 ASLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLEL 316
Query: 269 EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 317 NENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 355
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 127 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 184
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 185 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 235
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 236 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 279
>gi|195346821|ref|XP_002039953.1| GM15616 [Drosophila sechellia]
gi|194135302|gb|EDW56818.1| GM15616 [Drosophila sechellia]
Length = 538
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 97/184 (52%), Gaps = 14/184 (7%)
Query: 92 LRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET 150
L L + DC+R++ AL + G+T LK ++LS CV VTD+G+KHL + LE+L L
Sbjct: 348 LEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDSGLKHLARMPKLEQLNLRSC 407
Query: 151 GLTAD-GIALLS-SLQNLSVLDLGGL-PVTDLVLRSL-QVLTKLEYLDLWGSQVSNRGA- 205
+D G+A L+ ++ LD+ ++D L + Q L +L L L Q+++ G
Sbjct: 408 DNISDIGMAYLTEGGSGINSLDVSFCDKISDQALTHIAQGLYRLRSLSLNQCQITDHGML 467
Query: 206 AVLKMFPRLSFLNLAWT------GVTKLP-NISSLECLNLSFIQQVGAE-TDLVLSLTAL 257
+ K L LN+ G+ L ++++L+ ++L Q+ ++ D+++ L L
Sbjct: 468 KIAKALHELENLNIGQCSRITDKGLQTLAEDLTNLKTIDLYGCTQLSSKGIDIIMKLPKL 527
Query: 258 QNLN 261
Q LN
Sbjct: 528 QKLN 531
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 111/250 (44%), Gaps = 49/250 (19%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSIS------- 140
R L +L + C +T++ L + G+ LK L+L C ++D G+ HL S
Sbjct: 286 LRNLETLELGGCCNITNTGLLLIAWGLKKLKHLNLRSCWHISDQGIGHLAGFSRETAEGN 345
Query: 141 -TLEKLWLSET--------GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLE 191
LE L L + G A G+ L S+ NLS + VTD L+ L + KLE
Sbjct: 346 LQLEYLGLQDCQRLSDEALGHIAQGLTSLKSI-NLSFC----VSVTDSGLKHLARMPKLE 400
Query: 192 YLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDL 250
L+L +S+ G A +L +G+ L++SF ++ +D
Sbjct: 401 QLNLRSCDNISDIGMA---------YLTEGGSGINS---------LDVSFCDKI---SDQ 439
Query: 251 VLSLTALQNLNHLERLNLEQTQVSDATLFPLS-TFKELIHLSLRNAS-LTDVSLHQLSSL 308
L+ A Q L L L+L Q Q++D + ++ EL +L++ S +TD L L+
Sbjct: 440 ALTHIA-QGLYRLRSLSLNQCQITDHGMLKIAKALHELENLNIGQCSRITDKGLQTLA-- 496
Query: 309 SKLTNLSIRD 318
LTNL D
Sbjct: 497 EDLTNLKTID 506
>gi|386042770|ref|YP_005961575.1| internalin A [Listeria monocytogenes 10403S]
gi|404409675|ref|YP_006695263.1| internalin A [Listeria monocytogenes SLCC5850]
gi|403399436|sp|G2K3G6.1|INLA_LISM4 RecName: Full=Internalin-A; Flags: Precursor
gi|150371722|dbj|BAF65676.1| internalin A [Listeria monocytogenes]
gi|150371786|dbj|BAF65682.1| internalin A [Listeria monocytogenes]
gi|150371800|dbj|BAF65689.1| internalin A [Listeria monocytogenes]
gi|150371810|dbj|BAF65694.1| internalin A [Listeria monocytogenes]
gi|150371812|dbj|BAF65695.1| internalin A [Listeria monocytogenes]
gi|150371816|dbj|BAF65697.1| internalin A [Listeria monocytogenes]
gi|150371826|dbj|BAF65702.1| internalin A [Listeria monocytogenes]
gi|150371840|dbj|BAF65709.1| internalin A [Listeria monocytogenes]
gi|150371842|dbj|BAF65710.1| internalin A [Listeria monocytogenes]
gi|150371862|dbj|BAF65720.1| internalin A [Listeria monocytogenes]
gi|150371866|dbj|BAF65722.1| internalin A [Listeria monocytogenes]
gi|167861902|gb|ACA05650.1| InlA [Listeria monocytogenes]
gi|167861984|gb|ACA05691.1| InlA [Listeria monocytogenes]
gi|167862000|gb|ACA05699.1| InlA [Listeria monocytogenes]
gi|167862006|gb|ACA05702.1| InlA [Listeria monocytogenes]
gi|194239412|emb|CAQ76846.1| internalin A [Listeria monocytogenes]
gi|223006784|gb|ACM69349.1| internalin A [Listeria monocytogenes]
gi|298359776|gb|ADI77467.1| internalin A [Listeria monocytogenes]
gi|298359804|gb|ADI77481.1| internalin A [Listeria monocytogenes]
gi|298359874|gb|ADI77516.1| internalin A [Listeria monocytogenes]
gi|298360072|gb|ADI77615.1| internalin A [Listeria monocytogenes]
gi|298360106|gb|ADI77632.1| internalin A [Listeria monocytogenes]
gi|298360118|gb|ADI77638.1| internalin A [Listeria monocytogenes]
gi|298360218|gb|ADI77688.1| internalin A [Listeria monocytogenes]
gi|298360262|gb|ADI77710.1| internalin A [Listeria monocytogenes]
gi|298360280|gb|ADI77719.1| internalin A [Listeria monocytogenes]
gi|298360386|gb|ADI77772.1| internalin A [Listeria monocytogenes]
gi|298360468|gb|ADI77813.1| internalin A [Listeria monocytogenes]
gi|298360570|gb|ADI77864.1| internalin A [Listeria monocytogenes]
gi|298360722|gb|ADI77940.1| internalin A [Listeria monocytogenes]
gi|302034307|gb|ADK92307.1| internalin A [Listeria monocytogenes]
gi|302034309|gb|ADK92308.1| internalin A [Listeria monocytogenes]
gi|302034311|gb|ADK92309.1| internalin A [Listeria monocytogenes]
gi|302034313|gb|ADK92310.1| internalin A [Listeria monocytogenes]
gi|302034319|gb|ADK92313.1| internalin A [Listeria monocytogenes]
gi|302034321|gb|ADK92314.1| internalin A [Listeria monocytogenes]
gi|302034323|gb|ADK92315.1| internalin A [Listeria monocytogenes]
gi|302034325|gb|ADK92316.1| internalin A [Listeria monocytogenes]
gi|345536004|gb|AEO05444.1| internalin A [Listeria monocytogenes 10403S]
gi|404229501|emb|CBY50905.1| internalin A (LPXTG motif) [Listeria monocytogenes SLCC5850]
gi|443428772|gb|AGC92185.1| internalin A [Listeria monocytogenes]
gi|443428780|gb|AGC92189.1| internalin A [Listeria monocytogenes]
gi|443428864|gb|AGC92231.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|313485054|gb|ADR53001.1| InlA [Listeria monocytogenes]
Length = 771
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|22347544|gb|AAM95917.1| internalin A precursor [Listeria monocytogenes]
Length = 741
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 105 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 160
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 161 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 214
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 215 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 269
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 270 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 307
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 79 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 136
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 137 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 187
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 188 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 231
>gi|284447308|ref|NP_036289.3| F-box/LRR-repeat protein 2 isoform 1 [Homo sapiens]
gi|332215495|ref|XP_003256880.1| PREDICTED: F-box/LRR-repeat protein 2 isoform 1 [Nomascus
leucogenys]
gi|332816367|ref|XP_516355.3| PREDICTED: F-box/LRR-repeat protein 2 isoform 2 [Pan troglodytes]
gi|397511632|ref|XP_003826174.1| PREDICTED: F-box/LRR-repeat protein 2 isoform 1 [Pan paniscus]
gi|426339872|ref|XP_004033863.1| PREDICTED: F-box/LRR-repeat protein 2 isoform 1 [Gorilla gorilla
gorilla]
gi|145559475|sp|Q9UKC9.3|FBXL2_HUMAN RecName: Full=F-box/LRR-repeat protein 2; AltName: Full=F-box and
leucine-rich repeat protein 2; AltName: Full=F-box
protein FBL2/FBL3
gi|5919219|gb|AAD56248.1|AF186273_1 leucine-rich repeats containing F-box protein FBL3 [Homo sapiens]
gi|21618736|gb|AAH31556.1| F-box and leucine-rich repeat protein 2 [Homo sapiens]
gi|123980522|gb|ABM82090.1| F-box and leucine-rich repeat protein 2 [synthetic construct]
gi|123995339|gb|ABM85271.1| F-box and leucine-rich repeat protein 2 [synthetic construct]
gi|410207678|gb|JAA01058.1| F-box and leucine-rich repeat protein 2 [Pan troglodytes]
gi|410253310|gb|JAA14622.1| F-box and leucine-rich repeat protein 2 [Pan troglodytes]
gi|410294502|gb|JAA25851.1| F-box and leucine-rich repeat protein 2 [Pan troglodytes]
Length = 423
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 161/342 (47%), Gaps = 26/342 (7%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC-LKELDLSRCVK 127
+ LRG V D+ + R + LN+ C ++T S ++L+ LK LDL+ CV
Sbjct: 83 LSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVS 142
Query: 128 VTDAGMKHLL-SISTLEKLWLSETG-LTADGI-ALLSSLQNLSVLDLGGLP-VTDLVLRS 183
+T++ +K + LE L LS +T DGI AL+ + L L L G + D L+
Sbjct: 143 ITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKH 202
Query: 184 LQ-VLTKLEYLDLWG-SQVSNRGAA-VLKMFPRLSFLNLAWTGVTKLPNIS----SLECL 236
+Q +L L+L S++++ G + + RL L L +G + L + S L C
Sbjct: 203 IQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCL--SGCSNLTDASLTALGLNCP 260
Query: 237 NLSFIQQVGAE--TDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTF-KELIHLSL 292
L ++ TD +L A +N + LE+++LE+ ++D+TL LS +L LSL
Sbjct: 261 RLQILEAARCSHLTDAGFTLLA-RNCHELEKMDLEECILITDSTLIQLSIHCPKLQALSL 319
Query: 293 RNASL-TDVSLHQLSSLS----KLTNLSIRDAVL-TNSGLGSFKPPRSLKLLDLHGGWLL 346
+ L TD + LS+ + +L L + + +L T+ L + R L+ L+L+ +
Sbjct: 320 SHCELITDDGILHLSNSTCGHERLRVLELDNCLLITDVALEHLENCRGLERLELYDCQQV 379
Query: 347 TEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSL 388
T I + P ++V + + P + +G R +
Sbjct: 380 TRAGIKRMRAQLPHVKVHAYFAPVTPPTAVAGSGQRLCRCCV 421
>gi|71912408|gb|AAZ53236.1| InlA [Listeria monocytogenes]
Length = 800
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|290976088|ref|XP_002670773.1| predicted protein [Naegleria gruberi]
gi|284084335|gb|EFC38029.1| predicted protein [Naegleria gruberi]
Length = 681
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 117/271 (43%), Gaps = 37/271 (13%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLS----RCVKV-TDAGMKHLL 137
++ + + L+ LNV+ R + ++ + M L LD+S +C+ V +GM++L
Sbjct: 430 ISVISQMKQLKELNVSG-NRFSFESVCKIKDMKQLTILDMSYTKLKCLDVEVVSGMRNLT 488
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
S L +++ L G L++ L L L +G + D + S+ + L LD+
Sbjct: 489 S------LRINDNDLGIQGAELIAQLDQLRELFIGSNNIGDEGMYSISHMKNLTKLDVSS 542
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTAL 257
+ + GA + L+F+N+ + + I Q GAE ++
Sbjct: 543 NGIGEEGANSISQLKGLTFINVGF-----------------NLIGQQGAE--------SI 577
Query: 258 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 317
L L L + ++ +S + + L + + D H +S L KL+ L +
Sbjct: 578 GELEQLTTLLINNCEIGPTGAKFISKMQRVTELDISLNDIQDEGAHYISELEKLSILYVN 637
Query: 318 DAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 348
+ +T+ GL + ++L+LLD+ G + E
Sbjct: 638 NNEITDEGLKAITQMKNLQLLDVSGNKISDE 668
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N + + +G L +L + +C + A + ++ M + ELD+S + D G
Sbjct: 565 GFNLIGQQGAESIGELEQLTTLLINNCEIGPTGAKF-ISKMQRVTELDIS-LNDIQDEGA 622
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTD 178
++ + L L+++ +T +G+ ++ ++NL +LD+ G ++D
Sbjct: 623 HYISELEKLSILYVNNNEITDEGLKAITQMKNLQLLDVSGNKISD 667
>gi|171910953|ref|ZP_02926423.1| probable G protein-coupled receptor LGR4 [Verrucomicrobium spinosum
DSM 4136]
Length = 400
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 108/253 (42%), Gaps = 5/253 (1%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
NA + R + DA + ++G + SLN+ + + + L + LK L +
Sbjct: 124 NAGPHDHRKTDPYDAAFFEHVGQLSKIESLNII-ATKCSDDWIAPLGKLKTLKTLKFTNN 182
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL- 184
K++DAG++ L ++ LE TG+ A L+ + G + D L L
Sbjct: 183 GKLSDAGLEKLAGLNQLEAFSFVGTGMQGHAYAKFEGWTALTRVSHRGSSIDDEGLTLLC 242
Query: 185 QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQV 244
LE + L ++ + G A L +L L L T ++ + ++L ++ Q+
Sbjct: 243 AKFPNLESISLAHAKCGDAGVAQLPKLTKLKGLELGSKNATP-GSLVHVAKMSLEYL-QL 300
Query: 245 GAETDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTFKELIHLSLRNASLTDVSLH 303
G D + A++ + L RL L + + DA L ++ K L L L + LTD L
Sbjct: 301 GDGLDAPEGIAAIKGMTTLRRLTLTNAKSLGDADLQAVAGIKGLESLELNSVELTDERLP 360
Query: 304 QLSSLSKLTNLSI 316
L S S L L I
Sbjct: 361 LLKSFSHLKELRI 373
>gi|112959440|gb|ABI27247.1| truncated internalin A [Listeria monocytogenes]
gi|112959442|gb|ABI27248.1| truncated internalin A [Listeria monocytogenes]
gi|112959448|gb|ABI27251.1| truncated internalin A [Listeria monocytogenes]
gi|112959454|gb|ABI27254.1| truncated internalin A [Listeria monocytogenes]
gi|112959458|gb|ABI27256.1| truncated internalin A [Listeria monocytogenes]
gi|112959460|gb|ABI27257.1| truncated internalin A [Listeria monocytogenes]
gi|112959462|gb|ABI27258.1| truncated internalin A [Listeria monocytogenes]
gi|112959472|gb|ABI27263.1| truncated internalin A [Listeria monocytogenes]
gi|112959480|gb|ABI27267.1| truncated internalin A [Listeria monocytogenes]
gi|112959482|gb|ABI27268.1| truncated internalin A [Listeria monocytogenes]
gi|112959488|gb|ABI27271.1| truncated internalin A [Listeria monocytogenes]
gi|112959514|gb|ABI27284.1| truncated internalin A [Listeria monocytogenes]
gi|112959538|gb|ABI27296.1| truncated internalin A [Listeria monocytogenes]
gi|112959542|gb|ABI27298.1| truncated internalin A [Listeria monocytogenes]
gi|112959548|gb|ABI27301.1| truncated internalin A [Listeria monocytogenes]
Length = 542
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 119/226 (52%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 94 IDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERL 149
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 150 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 204
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++ + + +++ L L L
Sbjct: 205 -TLASLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTN 258
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 259 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 300
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 72 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 129
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 130 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 180
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 181 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 224
>gi|84043372|ref|XP_951476.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|33348176|gb|AAQ15503.1| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
gi|62359981|gb|AAX80405.1| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei]
Length = 1393
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 126/310 (40%), Gaps = 63/310 (20%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+ LG YLR LN+ + ++S + L +L++ +++ ++ L +I TL
Sbjct: 430 VGCLGTLPYLRVLNIKEVH-ISSLDFTGIGASKSLLQLNMESITGLSN--VEALANILTL 486
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL------------------ 184
EKL L GI L +L L VLDL G + LRSL
Sbjct: 487 EKLSLHGCTDIDAGIGCLGNLPQLKVLDLSGTNTDNESLRSLCLSQTMVSLNLSHCWKMT 546
Query: 185 --------------------------QVLTKLEYLD---LWGSQVSNRGAAVLKMFPRLS 215
+ L KL+ L L + +++RG + L
Sbjct: 547 NVSHISSLEALNELNLSNCIRINAGWEALEKLQQLHVAILSNTHITDRGISYFSKCKNLV 606
Query: 216 FLNLAWTG----VTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 271
L+L++ VT L NI++LE LNL + L+ L L L LN++
Sbjct: 607 TLDLSFCNKLLDVTTLSNITTLEELNLDSCSNIRK------GLSVLGELPRLCVLNIKGV 660
Query: 272 QVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 330
Q+ D+ + L K L+ LSL N DV+ LS+L L L++ SG+G+
Sbjct: 661 QLEDSVIGSLGNGKSLVRLSLENCKGFGDVT--PLSNLVTLEELNLHYCDKVTSGMGTLG 718
Query: 331 PPRSLKLLDL 340
L++LDL
Sbjct: 719 RLPQLRVLDL 728
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 122/274 (44%), Gaps = 36/274 (13%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
++ + + + LRSLN++ C+ VT + L+ ++ L+EL+++ C G + L
Sbjct: 949 INGDATKNISESKSLRSLNLSHCKWVTD--ISVLSSLSTLEELNVN-CCNAIRKGWESLG 1005
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP-VTDL-VLRSLQVLTKLEYLDL 195
+ L LS+T +TA IA LSS + L L ++D+ V+ +Q L +L +
Sbjct: 1006 KLPLLRVAILSDTNITAKDIACLSSCKKLVKLKFFRCKKLSDVTVVYKIQSLEELIVKNC 1065
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLT 255
G +G L PRL FL+L + + ++ +G LV
Sbjct: 1066 SGGL---KGLNALGTLPRLRFLHLRNVSGSDIS------------VESIGTSKSLV---- 1106
Query: 256 ALQNLNHLERLNLE-QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 314
RLN+E + +++D T PLS L LSLR + L L +L +L
Sbjct: 1107 ---------RLNIETREELTDTT--PLSNITSLEELSLRKCGNNLEGVGTLGKLPRLRSL 1155
Query: 315 SIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 348
+ + + +S L RS+ L+L W LT+
Sbjct: 1156 YLGLSRINDSTLYYICLSRSITSLNLASSWKLTD 1189
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 126/293 (43%), Gaps = 39/293 (13%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC------------ 125
+D + + A L L+V++C +T + ++ + L+EL+L+ C
Sbjct: 236 IDDTCIGEISACAKLSKLSVSECNNITDAT--PISQLAALEELNLNSCYHITKGIGTLGM 293
Query: 126 -----------VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 174
V V D +K L +LE+L +S D I LS+ + L+L G
Sbjct: 294 LLRLRMLDLSGVPVEDNCLKDLCDCGSLERLNISYCIQLTD-INPLSNATAIEELNLNGC 352
Query: 175 PVTDLVLRSLQVLTKLEYL---DLWGSQVSNRGAAVLKMFPRLSFLNLAWTG-VTKLPNI 230
+ + L KL D+ S+ S ++S N A G ++ L +I
Sbjct: 353 RRITRGIDVVWALPKLRVFHMKDVHLSEPSLDSVGTGGSLVKVSLDNCAGFGDMSLLSSI 412
Query: 231 SSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 290
+LE LN IQ+ D++ + L L +L LN+++ +S + K L+ L
Sbjct: 413 VTLEELN---IQKCA---DIISGVGCLGTLPYLRVLNIKEVHISSLDFTGIGASKSLLQL 466
Query: 291 SLRNASLTDVS-LHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 342
++ S+T +S + L+++ L LS+ ++G+G LK+LDL G
Sbjct: 467 NME--SITGLSNVEALANILTLEKLSLHGCTDIDAGIGCLGNLPQLKVLDLSG 517
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 128/288 (44%), Gaps = 53/288 (18%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTS-SALWALTGMTCLK---------------- 118
N+VD + +L + L L + D ++T+ + LT + CL+
Sbjct: 187 NNVDNNDVCHLFSVGTLEELAITDTMQLTNIRGISRLTNLMCLELNSTDIDDTCIGEISA 246
Query: 119 -----ELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 173
+L +S C +TDA + ++ LE+L L+ GI L L L +LDL G
Sbjct: 247 CAKLSKLSVSECNNITDA--TPISQLAALEELNLNSCYHITKGIGTLGMLLRLRMLDLSG 304
Query: 174 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 233
+PV D L+ L LE L+ +S+ + T + L N +++
Sbjct: 305 VPVEDNCLKDLCDCGSLERLN-------------------ISYC-IQLTDINPLSNATAI 344
Query: 234 ECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 293
E LNL+ +++ D+V +L L+ +++ +S+ +L + T L+ +SL
Sbjct: 345 EELNLNGCRRITRGIDVVWALPKLR------VFHMKDVHLSEPSLDSVGTGGSLVKVSLD 398
Query: 294 N-ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
N A D+SL LSS+ L L+I+ SG+G L++L++
Sbjct: 399 NCAGFGDMSL--LSSIVTLEELNIQKCADIISGVGCLGTLPYLRVLNI 444
>gi|46447561|ref|YP_008926.1| hypothetical protein pc1927 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401202|emb|CAF24651.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 109
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
EN DAE +A+L L+ L+++ C+ +T + L LT +T L+ LDLS C +TDAG+
Sbjct: 16 ENLTDAE-LAHLTPLTALQYLDLSSCKEITDAGLAHLTPLTSLQHLDLSYCENLTDAGLA 74
Query: 135 HLLSISTLEKLWLS 148
HL ++ L+ L LS
Sbjct: 75 HLAPLTALQHLDLS 88
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET- 150
L+ L ++ C +T + L LT +T L+ LDLS C ++TDAG+ HL +++L+ L LS
Sbjct: 7 LQYLCLSCCENLTDAELAHLTPLTALQYLDLSSCKEITDAGLAHLTPLTSLQHLDLSYCE 66
Query: 151 GLTADGIALLSSLQNLSVLDL 171
LT G+A L+ L L LDL
Sbjct: 67 NLTDAGLAHLAPLTALQHLDL 87
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 111 LTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVL 169
+T +T L+ L LS C +TDA + HL ++ L+ L LS +T G+A L+ L +L L
Sbjct: 1 MTPLTGLQYLCLSCCENLTDAELAHLTPLTALQYLDLSSCKEITDAGLAHLTPLTSLQHL 60
Query: 170 DLGGLP-VTDLVLRSLQVLTKLEYLDL 195
DL +TD L L LT L++LDL
Sbjct: 61 DLSYCENLTDAGLAHLAPLTALQHLDL 87
>gi|219821360|gb|ACL37818.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 103 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 158
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 159 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 212
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 213 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 267
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 268 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 305
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 77 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 134
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 135 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 186 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 229
>gi|219821294|gb|ACL37774.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 103 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 158
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 159 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 212
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 213 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 267
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 268 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 305
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 77 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 134
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 135 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 186 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 229
>gi|219821309|gb|ACL37784.1| internalin A [Listeria monocytogenes]
gi|219821393|gb|ACL37840.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 103 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 158
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 159 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 212
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 213 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 267
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 268 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 305
Score = 44.7 bits (104), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 77 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 134
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 135 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 186 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 229
>gi|298360200|gb|ADI77679.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|22347572|gb|AAM95931.1| internalin A precursor [Listeria monocytogenes]
Length = 741
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 105 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 160
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 161 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 214
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 215 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 269
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 270 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 307
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 87/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I+ L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 79 ISPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 136
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 137 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 187
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 188 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 231
>gi|371942144|gb|AEX60884.1| truncated internaline [Listeria monocytogenes]
Length = 491
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 118/223 (52%), Gaps = 19/223 (8%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIGT--L 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNL 268
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLEL 324
Query: 269 EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 325 NENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|298359722|gb|ADI77440.1| truncated internalin A [Listeria monocytogenes]
gi|298359752|gb|ADI77455.1| truncated internalin A [Listeria monocytogenes]
gi|298359762|gb|ADI77460.1| truncated internalin A [Listeria monocytogenes]
gi|298359812|gb|ADI77485.1| truncated internalin A [Listeria monocytogenes]
gi|298359814|gb|ADI77486.1| truncated internalin A [Listeria monocytogenes]
gi|298359858|gb|ADI77508.1| truncated internalin A [Listeria monocytogenes]
gi|298359886|gb|ADI77522.1| truncated internalin A [Listeria monocytogenes]
gi|298359900|gb|ADI77529.1| truncated internalin A [Listeria monocytogenes]
gi|298359906|gb|ADI77532.1| truncated internalin A [Listeria monocytogenes]
gi|298359912|gb|ADI77535.1| truncated internalin A [Listeria monocytogenes]
gi|298359944|gb|ADI77551.1| truncated internalin A [Listeria monocytogenes]
gi|298359980|gb|ADI77569.1| truncated internalin A [Listeria monocytogenes]
gi|298359990|gb|ADI77574.1| truncated internalin A [Listeria monocytogenes]
gi|298359992|gb|ADI77575.1| truncated internalin A [Listeria monocytogenes]
gi|298359994|gb|ADI77576.1| truncated internalin A [Listeria monocytogenes]
gi|298360008|gb|ADI77583.1| truncated internalin A [Listeria monocytogenes]
gi|298360026|gb|ADI77592.1| truncated internalin A [Listeria monocytogenes]
gi|298360060|gb|ADI77609.1| truncated internalin A [Listeria monocytogenes]
gi|298360078|gb|ADI77618.1| truncated internalin A [Listeria monocytogenes]
gi|298360082|gb|ADI77620.1| truncated internalin A [Listeria monocytogenes]
gi|298360096|gb|ADI77627.1| truncated internalin A [Listeria monocytogenes]
gi|298360142|gb|ADI77650.1| truncated internalin A [Listeria monocytogenes]
gi|298360144|gb|ADI77651.1| truncated internalin A [Listeria monocytogenes]
gi|298360146|gb|ADI77652.1| truncated internalin A [Listeria monocytogenes]
gi|298360160|gb|ADI77659.1| truncated internalin A [Listeria monocytogenes]
gi|298360192|gb|ADI77675.1| truncated internalin A [Listeria monocytogenes]
gi|298360252|gb|ADI77705.1| truncated internalin A [Listeria monocytogenes]
gi|298360274|gb|ADI77716.1| truncated internalin A [Listeria monocytogenes]
gi|298360276|gb|ADI77717.1| truncated internalin A [Listeria monocytogenes]
gi|298360296|gb|ADI77727.1| truncated internalin A [Listeria monocytogenes]
gi|298360304|gb|ADI77731.1| truncated internalin A [Listeria monocytogenes]
gi|298360316|gb|ADI77737.1| truncated internalin A [Listeria monocytogenes]
gi|298360320|gb|ADI77739.1| truncated internalin A [Listeria monocytogenes]
gi|298360336|gb|ADI77747.1| truncated internalin A [Listeria monocytogenes]
gi|298360342|gb|ADI77750.1| truncated internalin A [Listeria monocytogenes]
gi|298360348|gb|ADI77753.1| truncated internalin A [Listeria monocytogenes]
gi|298360374|gb|ADI77766.1| truncated internalin A [Listeria monocytogenes]
gi|298360380|gb|ADI77769.1| truncated internalin A [Listeria monocytogenes]
gi|298360404|gb|ADI77781.1| truncated internalin A [Listeria monocytogenes]
gi|298360414|gb|ADI77786.1| truncated internalin A [Listeria monocytogenes]
gi|298360426|gb|ADI77792.1| truncated internalin A [Listeria monocytogenes]
gi|298360458|gb|ADI77808.1| truncated internalin A [Listeria monocytogenes]
gi|298360464|gb|ADI77811.1| truncated internalin A [Listeria monocytogenes]
gi|298360488|gb|ADI77823.1| truncated internalin A [Listeria monocytogenes]
gi|298360492|gb|ADI77825.1| truncated internalin A [Listeria monocytogenes]
gi|298360518|gb|ADI77838.1| truncated internalin A [Listeria monocytogenes]
gi|298360538|gb|ADI77848.1| truncated internalin A [Listeria monocytogenes]
gi|298360562|gb|ADI77860.1| truncated internalin A [Listeria monocytogenes]
gi|298360594|gb|ADI77876.1| truncated internalin A [Listeria monocytogenes]
gi|298360616|gb|ADI77887.1| truncated internalin A [Listeria monocytogenes]
gi|298360654|gb|ADI77906.1| truncated internalin A [Listeria monocytogenes]
gi|298360660|gb|ADI77909.1| truncated internalin A [Listeria monocytogenes]
gi|298360668|gb|ADI77913.1| truncated internalin A [Listeria monocytogenes]
gi|298360690|gb|ADI77924.1| truncated internalin A [Listeria monocytogenes]
gi|298360696|gb|ADI77927.1| truncated internalin A [Listeria monocytogenes]
gi|298360720|gb|ADI77939.1| truncated internalin A [Listeria monocytogenes]
gi|443428784|gb|AGC92191.1| truncated internalin A [Listeria monocytogenes]
gi|443428786|gb|AGC92192.1| truncated internalin A [Listeria monocytogenes]
gi|443428790|gb|AGC92194.1| truncated internalin A [Listeria monocytogenes]
gi|443428794|gb|AGC92196.1| truncated internalin A [Listeria monocytogenes]
gi|443428808|gb|AGC92203.1| truncated internalin A [Listeria monocytogenes]
gi|443428810|gb|AGC92204.1| truncated internalin A [Listeria monocytogenes]
gi|443428828|gb|AGC92213.1| truncated internalin A [Listeria monocytogenes]
gi|443428866|gb|AGC92232.1| truncated internalin A [Listeria monocytogenes]
gi|443428874|gb|AGC92236.1| truncated internalin A [Listeria monocytogenes]
gi|443428876|gb|AGC92237.1| truncated internalin A [Listeria monocytogenes]
Length = 699
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|290892407|ref|ZP_06555401.1| InlA protein [Listeria monocytogenes FSL J2-071]
gi|290557973|gb|EFD91493.1| InlA protein [Listeria monocytogenes FSL J2-071]
Length = 796
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 164 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 219
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 220 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 273
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 274 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 328
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 329 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 366
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 138 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 195
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 196 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 246
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 247 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 290
>gi|404406915|ref|YP_006689630.1| internalin A [Listeria monocytogenes SLCC2376]
gi|130774829|gb|ABO32427.1| InlA [Listeria monocytogenes]
gi|167861972|gb|ACA05685.1| InlA [Listeria monocytogenes]
gi|194326147|emb|CAQ77232.1| internalin A [Listeria monocytogenes]
gi|404241064|emb|CBY62464.1| internalin A (LPXTG motif) [Listeria monocytogenes SLCC2376]
Length = 800
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|157877504|ref|XP_001687069.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68130144|emb|CAJ09455.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 1207
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 118/240 (49%), Gaps = 14/240 (5%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
M ++G L L++ R++T + L +T L+ L+LS + VTD G L + +L
Sbjct: 542 MQHIGLCDKLVELHLQSLRQLTD--IGVLKDLTALRVLNLSDNL-VTDEGCSALHCMPSL 598
Query: 143 EKLWLSE----TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
++L L+ T L A A + L LD+ +TD ++ +Q T L YL+L G
Sbjct: 599 QRLNLAFCRCITSLAAAFTASGRWMHRLLSLDVSHTNITDAGVQCMQECTDLRYLNLCGC 658
Query: 199 QVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL-NLSFIQQVGAETDLVLSLTAL 257
R + + KM L +LNL T VT L C NL F+ ++ V SL+
Sbjct: 659 SELRRLSWLQKM-SSLRWLNLGGTRVTDEETNHYLPCARNLRFLSL--SDCSGVRSLSFA 715
Query: 258 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSI 316
L+ LE L+LE T V+D+ L L ++L +LSL + + DVS L +L L L+I
Sbjct: 716 VRLHQLEYLSLESTSVADSELPCLCHCRKLRYLSLESCVDIRDVS--PLCALPALLELNI 773
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 114/255 (44%), Gaps = 43/255 (16%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSI-STLEKLWLSETGLTADGIALLS 161
VT + L +LTG T L++L L C ++TD + L ++ TLE+L + T L+ + +
Sbjct: 489 VTDTDLLSLTGCTQLRQLVLDECRQITD--LSFLANLRGTLERLLMPRTLLSNANMQHIG 546
Query: 162 SLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA 220
L L L L +TD+ + L+ LT L L+L + V++ G + L P L LNLA
Sbjct: 547 LCDKLVELHLQSLRQLTDIGV--LKDLTALRVLNLSDNLVTDEGCSALHCMPSLQRLNLA 604
Query: 221 W----------------------------TGVTKLPNISSLECLNLSFIQQVGAETDLVL 252
+ T +T EC +L ++ G +
Sbjct: 605 FCRCITSLAAAFTASGRWMHRLLSLDVSHTNITDAGVQCMQECTDLRYLNLCGCSE--LR 662
Query: 253 SLTALQNLNHLERLNLEQTQVSD-ATLFPLSTFKELIHLSLRNASLT-----DVSLHQLS 306
L+ LQ ++ L LNL T+V+D T L + L LSL + S V LHQL
Sbjct: 663 RLSWLQKMSSLRWLNLGGTRVTDEETNHYLPCARNLRFLSLSDCSGVRSLSFAVRLHQLE 722
Query: 307 SLSKLTNLSIRDAVL 321
LS L + S+ D+ L
Sbjct: 723 YLS-LESTSVADSEL 736
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 33/167 (19%)
Query: 114 MTCLKELDLSRCVKVTD-AGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLG 172
C+ LDL+RC +V +G+++L + L +L L+++ + DG+ +S+ + L VL L
Sbjct: 1013 FACVSCLDLTRCTEVQCLSGLENLYA---LRELTLTQSSVDNDGVRAVSACETLEVLRLT 1069
Query: 173 GL-PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNIS 231
VTD+ L L KL L + +Q++N+G + L +LN A
Sbjct: 1070 ECRGVTDV--NCLGGLRKLRVLCVARTQLTNQGLEGIGHCLALQYLNCA----------- 1116
Query: 232 SLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATL 278
EC LS + AL +L HL L+LE+T V DA +
Sbjct: 1117 --ECRYLSDVN-------------ALSSLKHLIELHLERTDVVDAGI 1148
>gi|219821273|gb|ACL37760.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 103 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 158
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 159 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 212
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 213 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 267
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 268 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 305
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 77 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 134
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 135 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 186 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 229
>gi|218960535|ref|YP_001740310.1| putative Phosphoprotein phosphatase [Candidatus Cloacamonas
acidaminovorans]
gi|167729192|emb|CAO80103.1| putative Phosphoprotein phosphatase [Candidatus Cloacamonas
acidaminovorans str. Evry]
Length = 3445
Score = 57.0 bits (136), Expect = 2e-05, Method: Composition-based stats.
Identities = 75/265 (28%), Positives = 119/265 (44%), Gaps = 43/265 (16%)
Query: 72 LRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKEL--------DLS 123
L G D + + +YL +L D S L L G+T L+EL DLS
Sbjct: 2923 LAGNLHADGRNIISIEGAQYLTNLQSLDLDSNQISDLSPLAGLTNLQELYLYYNQISDLS 2982
Query: 124 RCVKVTD-----------AGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLG 172
++T+ + + L ++ L++L+L + ++ L+ L NL LDL
Sbjct: 2983 PLAELTNLQYLDLGGNQISDLSPLAGLNNLQELYLYWNQI--GDLSPLAGLTNLQELDLY 3040
Query: 173 GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV---TKLPN 229
++D L L LT L YLDL +Q+S+ + L L L L W + + L
Sbjct: 3041 SNQISD--LSPLAELTNLWYLDLSYNQISD--LSPLAGLTNLQDLYLGWNQINYLSPLAG 3096
Query: 230 ISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIH 289
+++L+ LNL ++ + L+ L L +L+ L+L Q+SD L PL+ L +
Sbjct: 3097 LTNLQVLNLY--------SNQISDLSPLAELTNLQYLHLYYNQISD--LSPLTGLTNLHY 3146
Query: 290 LSLRNASLTDVSLHQLSSLSKLTNL 314
L L ++D LS L LTNL
Sbjct: 3147 LYLAYNQISD-----LSPLIGLTNL 3166
Score = 53.9 bits (128), Expect = 2e-04, Method: Composition-based stats.
Identities = 65/236 (27%), Positives = 101/236 (42%), Gaps = 55/236 (23%)
Query: 152 LTADGIALLS-----SLQNLSVLDLGGLPVTDL--------------------VLRSLQV 186
L ADG ++S L NL LDL ++DL L L
Sbjct: 2296 LHADGRNIISIEGAQYLTNLQSLDLDSNQISDLSPLAGLTNLLELYLLDNMINYLSPLAG 2355
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGA 246
LT L+YLDL G+Q+S+ + L L L L W + L ++ L L Q++
Sbjct: 2356 LTNLQYLDLGGNQISD--LSPLAGLTNLQDLYLGWNQINYLSPLAGLTNL-----QELDL 2408
Query: 247 ETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS----- 301
+ + ++ L L +L++L L Q+SD L PLS L +L L ++++S
Sbjct: 2409 NNNQISNINPLAGLTNLQKLYLYYNQISD--LSPLSGLTNLQYLLLEYNQISNISPLAGL 2466
Query: 302 ------------LHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 345
+ LS L++LTNL D L+ + + P + L++L G WL
Sbjct: 2467 TNLQVLDLYSNQISDLSPLAELTNLWYLD--LSYNQISDLSP--LVGLVNLQGLWL 2518
Score = 47.0 bits (110), Expect = 0.022, Method: Composition-based stats.
Identities = 49/157 (31%), Positives = 77/157 (49%), Gaps = 16/157 (10%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL 219
L+ L NL L L ++DL L LT L+YLDL G+Q+S+ + L L L L
Sbjct: 2962 LAGLTNLQELYLYYNQISDL--SPLAELTNLQYLDLGGNQISD--LSPLAGLNNLQELYL 3017
Query: 220 AWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLF 279
W + L ++ L L Q++ ++ + L+ L L +L L+L Q+SD L
Sbjct: 3018 YWNQIGDLSPLAGLTNL-----QELDLYSNQISDLSPLAELTNLWYLDLSYNQISD--LS 3070
Query: 280 PLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 316
PL+ +L++ L ++ LS L+ LTNL +
Sbjct: 3071 PLAGLT-----NLQDLYLGWNQINYLSPLAGLTNLQV 3102
Score = 38.5 bits (88), Expect = 7.0, Method: Composition-based stats.
Identities = 47/167 (28%), Positives = 79/167 (47%), Gaps = 13/167 (7%)
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
L ++ L+ L L+ ++ I+ L+ L NL VLDL ++ L L LT L+ L L
Sbjct: 1161 LAGLTNLQNLILAYNQIS--DISPLAGLTNLQVLDLYSNQIS--YLSPLAGLTNLQELYL 1216
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLT 255
+Q+S+ + L L +NL ++ L ++ L L Q + + + ++
Sbjct: 1217 HSNQISD--LSPLAGMTNLRVINLKNNQISDLSPLAGLTNL-----QYLLLGWNKINDIS 1269
Query: 256 ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 302
L L +L LNL Q+SD L PL+ L +L L N ++ S+
Sbjct: 1270 PLAGLTNLWSLNLSYNQISD--LSPLAGLTNLWYLYLDNNPISYESM 1314
Score = 38.5 bits (88), Expect = 7.6, Method: Composition-based stats.
Identities = 58/213 (27%), Positives = 92/213 (43%), Gaps = 46/213 (21%)
Query: 106 SALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL----WLSETGLTADGIALLS 161
S L L G+T LK L+L G + I+ L L WL G IA L
Sbjct: 1717 SNLNPLAGLTNLKGLNL---------GSNQISDINPLAGLTNISWLFLFGNYISNIAPLE 1767
Query: 162 SLQNL-----------------SVLDLGGLPVTD---LVLRSLQVLTKLEYLDLWGSQVS 201
L NL +++D+GG+ + + + L LT L L+L+ +Q++
Sbjct: 1768 GLYNLRNLQLHYNQISDITPLAALIDIGGIALGSNQIVDITPLAGLTHLIGLELYHNQIN 1827
Query: 202 NRGAAVLKMFPRLSFLNLAWTGV--TKLPNISSLECLNLSFIQQVGAETDLVLSLTALQN 259
N A +NL W + ++ +IS L LS ++++ E + + ++ L
Sbjct: 1828 NIDALS-------GLINLQWLYLDGNQIIDISPLA--GLSILRELYLENNQINDISTLSE 1878
Query: 260 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSL 292
LN+L+ L L Q+SD L PL+ L L L
Sbjct: 1879 LNNLQYLFLYNNQISD--LSPLAGLTNLWWLLL 1909
>gi|71748370|ref|XP_823240.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70832908|gb|EAN78412.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 846
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 132/279 (47%), Gaps = 24/279 (8%)
Query: 77 SVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHL 136
+V + W+ L A RYL LNVA CR V + L+ + LK LDLS TD G ++L
Sbjct: 403 NVRSRWLESLRACRYLVELNVAYCRDVVEVSF--LSELRLLKHLDLSG----TDIGEQNL 456
Query: 137 LSISTLEKL--WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 194
I E L L + + + L +L+ L LD + D + + KLE+L
Sbjct: 457 DPIGRCEGLTFLLLKDCSSVKDLHFLETLRELVKLDTERTGIMDANVCQVVACKKLEFLS 516
Query: 195 LWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL-ECLNLSFIQQVGAETDLVLS 253
+ L+ L L+LA T VT ISSL +C++L ++ +E L+
Sbjct: 517 FRYCHLLT-DVKCLEGLRNLKTLDLAGTNVTN-EGISSLPKCVSLEYVDV--SECCLITH 572
Query: 254 LTALQNLNHLERLNLEQTQVSDA---TLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 310
L L+ L +L+++ +Q ++D T P S + ++ S R ++ +V L L
Sbjct: 573 LEFLRPLPNLQQVVADQMNLTDIGGLTGAP-SLRRVTLNESKRLGTVGEVRLPYLQE--- 628
Query: 311 LTNLSIRDAVLTNSGLGS-FKPPRSLKLLDLHGGWLLTE 348
LS+R + ++N+G+ S RSL+ LD+ +TE
Sbjct: 629 ---LSLRKSTISNAGIRSLLASCRSLQHLDMQHCHSVTE 664
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 62/146 (42%), Gaps = 26/146 (17%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
V E+M ++ + LR L + +C +T + L+ + L+++DLSR VT G+K L
Sbjct: 684 VTGEFMTHIASCVNLRKLQMTECADITD--VNCLSALQSLEDIDLSR-TSVTTEGIKGLS 740
Query: 138 SISTLEKLWLSE-----------------------TGLTADGIALLSSLQNLSVLDLGGL 174
L KL LSE T +T GIA LS+ L L L
Sbjct: 741 KCYALRKLNLSECRYVTNVNCLGKLPFLRELHLEKTNVTDKGIAGLSNCIQLETLALTKC 800
Query: 175 PVTDLVLRSLQVLTKLEYLDLWGSQV 200
V R L LE D++G+ V
Sbjct: 801 SRITNVERLHSSLPHLEEFDVYGTSV 826
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 102/251 (40%), Gaps = 58/251 (23%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ + LR +A + L + R L+ L++ C VT L AL+ + L+EL L R ++
Sbjct: 627 QELSLRKSTISNAGIRSLLASCRSLQHLDMQHCHSVTE--LSALSQLPNLREL-LLRNIR 683
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
VT M H+ S L KL ++E D + LS+LQ+L +DL VT
Sbjct: 684 VTGEFMTHIASCVNLRKLQMTECADITD-VNCLSALQSLEDIDLSRTSVTT--------- 733
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAE 247
G+ L +L LNLS E
Sbjct: 734 ----------------------------------EGIKGLSKCYALRKLNLS-------E 752
Query: 248 TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVS-LHQL 305
V ++ L L L L+LE+T V+D + LS +L L+L S +T+V LH
Sbjct: 753 CRYVTNVNCLGKLPFLRELHLEKTNVTDKGIAGLSNCIQLETLALTKCSRITNVERLH-- 810
Query: 306 SSLSKLTNLSI 316
SSL L +
Sbjct: 811 SSLPHLEEFDV 821
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 121/309 (39%), Gaps = 63/309 (20%)
Query: 57 PSLLEVFKHNAEAIELR-GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMT 115
P+ +E +EL +N V A R L+ L ++ CRRV S W L +T
Sbjct: 335 PTAVEFISSLGSLVELDLRDNWVGDAGCASFVHCRQLQQLKLSCCRRV-SDVRW-LAALT 392
Query: 116 CLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP 175
CL+ LDLS + + WL L + + L L++
Sbjct: 393 CLRTLDLSH---------------TNVRSRWLES----------LRACRYLVELNVA--Y 425
Query: 176 VTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLE 234
D+V S L L L++LDL G+ + G L I E
Sbjct: 426 CRDVVEVSFLSELRLLKHLDLSGTDI----------------------GEQNLDPIGRCE 463
Query: 235 CLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 294
L ++ + DL L+ L L +L+ E+T + DA + + K+L LS R
Sbjct: 464 GLTFLLLKDCSSVKDLHF----LETLRELVKLDTERTGIMDANVCQVVACKKLEFLSFRY 519
Query: 295 AS-LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQ 353
LTDV L L L L + +TN G+ S SL+ +D+ L+T L+
Sbjct: 520 CHLLTDVKC--LEGLRNLKTLDLAGTNVTNEGISSLPKCVSLEYVDVSECCLITH---LE 574
Query: 354 FCKMHPRIE 362
F + P ++
Sbjct: 575 FLRPLPNLQ 583
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
E I+L SV E + L LR LN+++CR VT+ + L + L+EL L +
Sbjct: 722 EDIDL-SRTSVTTEGIKGLSKCYALRKLNLSECRYVTN--VNCLGKLPFLRELHLEK-TN 777
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 176
VTD G+ L + LE L L++ + L SSL +L D+ G V
Sbjct: 778 VTDKGIAGLSNCIQLETLALTKCSRITNVERLHSSLPHLEEFDVYGTSV 826
Score = 38.5 bits (88), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 116/270 (42%), Gaps = 36/270 (13%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
+++V E M + R L SL V +C + ++L ++T + SR DA
Sbjct: 139 KSAVTNEMMHIVSMARDLESLTVRNCFSESEASLCSVTSIL------NSRATNRRDARTF 192
Query: 135 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLE--Y 192
+L +G+T+ G+ L+ L L L P+++ ++ T LE
Sbjct: 193 YL-------------SGVTSLGV-----LRCLRSLTLFATPLSNQIMSYFCECTNLERVV 234
Query: 193 LDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVL 252
+D VS A L+ LS LN T LP IS +C +L ++ +
Sbjct: 235 VDSCCGLVSLECFAALQRLTHLSVLNCTITD-EGLPPIS--KCFSLQYVMLDNCMK--LR 289
Query: 253 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFK--ELIHLSLRNASLTDVSLHQLSSLSK 310
SL L +L +L L + + ++ + + L + E++ S+ N ++ +SSL
Sbjct: 290 SLNCLGSLRNLRTLIVSRNRIPEEGVQGLRKLRDLEVLRFSVFNRP---TAVEFISSLGS 346
Query: 311 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
L L +RD + ++G SF R L+ L L
Sbjct: 347 LVELDLRDNWVGDAGCASFVHCRQLQQLKL 376
>gi|313485061|gb|ADR53004.1| InlA [Listeria monocytogenes]
Length = 724
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|290996013|ref|XP_002680577.1| predicted protein [Naegleria gruberi]
gi|284094198|gb|EFC47833.1| predicted protein [Naegleria gruberi]
Length = 395
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 119/287 (41%), Gaps = 50/287 (17%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+G F+ L LN++D + A+ + L ELD+ C ++ + G K + + L L
Sbjct: 49 IGKFKQLTILNISD--NPIMKGVEAIGLLKQLTELDVRYC-RMGEEGSKIISKLGQLTNL 105
Query: 146 WLSETGLTADGIALL------------------------SSLQNLSVLDLGGLPVTDLVL 181
+S + + G + L+ L+ LD+ G + D
Sbjct: 106 DISHNSIRSKGFKFICEMKQLIILKVQYNKLEKSSSNQIEDLKQLTKLDISGNNIDDEGA 165
Query: 182 RSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECL 236
+S+ L +L LD+ + +SN G L +L +LN+++ V + + N+ L L
Sbjct: 166 KSIGQLKQLTKLDISVNYLSNVGVKHLSDLQQLIYLNVSYNDVDEEVAKDIYNMKKLSKL 225
Query: 237 NL----------SFIQQVGAETDLVLSLTALQN--------LNHLERLNLEQTQVSDATL 278
N+ S I ++ L + L N L HL L++ + Q++D
Sbjct: 226 NIGGNDLNIESFSMIGKMDHLKKLEFGVVGLGNDGFEFISKLKHLTMLDISENQINDNGA 285
Query: 279 FPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 325
LS + L L + S+ D + +S L KLT+L+ R+ N G
Sbjct: 286 ELLSRMEHLTKLDVGFNSIGDRGIRSISMLKKLTDLNARNNEFGNEG 332
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 89/199 (44%), Gaps = 19/199 (9%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N VD E + + L LN+ + + + M LK+L+ V + + G +
Sbjct: 206 NDVDEEVAKDIYNMKKLSKLNIG-GNDLNIESFSMIGKMDHLKKLEFG-VVGLGNDGFEF 263
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ + L L +SE + +G LLS +++L+ LD+G + D +RS+ +L KL L+
Sbjct: 264 ISKLKHLTMLDISENQINDNGAELLSRMEHLTKLDVGFNSIGDRGIRSISMLKKLTDLNA 323
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNL--------AWTGVTKLPNISSLECLNLSFIQQVGAE 247
++ N GA + +L+ L + +TK+ N+ L + ++ + G +
Sbjct: 324 RNNEFGNEGAKYISEMMQLTILQVDENKFGDEGIIAITKMKNLKKLRIFS-EYMDKEGKD 382
Query: 248 TDLVLSLTALQNLNHLERL 266
AL N H+ +L
Sbjct: 383 --------ALLNTKHITKL 393
>gi|219821354|gb|ACL37814.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 103 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 158
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 159 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 212
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ + L L L L
Sbjct: 213 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPIAGLTALTNLELN 267
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 268 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 305
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 77 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 134
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 135 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 186 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 229
>gi|112961619|gb|ABI28432.1| internalin A [Listeria monocytogenes]
gi|112961637|gb|ABI28444.1| internalin A [Listeria monocytogenes]
gi|112961655|gb|ABI28456.1| internalin A [Listeria monocytogenes]
gi|112961658|gb|ABI28458.1| internalin A [Listeria monocytogenes]
gi|112961766|gb|ABI28530.1| internalin A [Listeria monocytogenes]
Length = 751
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 112 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 167
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 168 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 221
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 222 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 276
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 277 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 314
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 86 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 143
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 144 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 194
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 195 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 238
>gi|85679218|gb|ABC72025.1| InlA [Listeria monocytogenes]
gi|85679232|gb|ABC72032.1| InlA [Listeria monocytogenes]
Length = 794
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 215
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 269
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 270 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 324
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 325 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 362
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 134 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 191
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 192 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 242
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 243 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 286
>gi|148607488|gb|ABQ95520.1| InlA [Listeria monocytogenes]
Length = 797
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|130774815|gb|ABO32420.1| InlA [Listeria monocytogenes]
gi|194239404|emb|CAQ76842.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|112959518|gb|ABI27286.1| internalin A [Listeria monocytogenes]
gi|112959520|gb|ABI27287.1| internalin A [Listeria monocytogenes]
Length = 737
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 98 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 153
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 154 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 207
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 208 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 262
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 263 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 300
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 72 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 129
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 130 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 180
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 181 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 224
>gi|112959452|gb|ABI27253.1| internalin A [Listeria monocytogenes]
Length = 737
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 98 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 153
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 154 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 207
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 208 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 262
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 263 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 300
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 72 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 129
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 130 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 180
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 181 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 224
>gi|112959506|gb|ABI27280.1| internalin A [Listeria monocytogenes]
Length = 737
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 98 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 153
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 154 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 207
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 208 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 262
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 263 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 300
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 72 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 129
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 130 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 180
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 181 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 224
>gi|298359932|gb|ADI77545.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|112959446|gb|ABI27250.1| internalin A [Listeria monocytogenes]
gi|112959466|gb|ABI27260.1| internalin A [Listeria monocytogenes]
gi|112959470|gb|ABI27262.1| internalin A [Listeria monocytogenes]
gi|112959474|gb|ABI27264.1| internalin A [Listeria monocytogenes]
gi|112959476|gb|ABI27265.1| internalin A [Listeria monocytogenes]
gi|112959478|gb|ABI27266.1| internalin A [Listeria monocytogenes]
gi|112959484|gb|ABI27269.1| internalin A [Listeria monocytogenes]
gi|112959486|gb|ABI27270.1| internalin A [Listeria monocytogenes]
gi|112959492|gb|ABI27273.1| internalin A [Listeria monocytogenes]
gi|112959494|gb|ABI27274.1| internalin A [Listeria monocytogenes]
gi|112959504|gb|ABI27279.1| internalin A [Listeria monocytogenes]
gi|112959516|gb|ABI27285.1| internalin A [Listeria monocytogenes]
gi|112959532|gb|ABI27293.1| internalin A [Listeria monocytogenes]
gi|112959534|gb|ABI27294.1| internalin A [Listeria monocytogenes]
gi|112959540|gb|ABI27297.1| internalin A [Listeria monocytogenes]
gi|112959544|gb|ABI27299.1| internalin A [Listeria monocytogenes]
gi|112959550|gb|ABI27302.1| internalin A [Listeria monocytogenes]
gi|112959554|gb|ABI27304.1| internalin A [Listeria monocytogenes]
gi|112959558|gb|ABI27306.1| internalin A [Listeria monocytogenes]
gi|112959560|gb|ABI27307.1| internalin A [Listeria monocytogenes]
Length = 737
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 98 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 153
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 154 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 207
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 208 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 262
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 263 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 300
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 72 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 129
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 130 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 180
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 181 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 224
>gi|371942126|gb|AEX60875.1| internaline [Listeria monocytogenes]
Length = 790
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|290996867|ref|XP_002681003.1| predicted protein [Naegleria gruberi]
gi|284094626|gb|EFC48259.1| predicted protein [Naegleria gruberi]
Length = 518
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 107/219 (48%), Gaps = 13/219 (5%)
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTD----LVLRSLQVLTKLEYL 193
S+S L KL + +TGL I++L +L+NL+ L+L L + D ++ + L+ +TKL +
Sbjct: 106 SMSQLTKLDVGKTGLHTFPISILPNLENLTELNLTFLEIFDQGAKIISQRLKFITKLS-V 164
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSFIQQVGAET 248
D G + G + +L+FLN++ + + + L+ L++ I +
Sbjct: 165 DYCG--IGIEGVQAIGNMKQLTFLNISENEMRNEEIELIGTLDQLKYLSIRNITRENNSV 222
Query: 249 DLVLSLTALQNLNHLERLNLEQTQVSDAT-LFPLSTFKELIHLSLRNASLTDVSLHQLSS 307
D L +L+NL L LN+ + ++SD L L K+L HL++ N + + +S
Sbjct: 223 DDYLDFNSLKNLKLLTYLNIGENRISDEIGLQFLREMKQLTHLNVANMEIGSIGAKIISE 282
Query: 308 LSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLL 346
++ L L+I + +G+ + L L++ L+
Sbjct: 283 MTHLVKLNIGRNDIGRTGIDYIGEMKQLTSLNVQNCNLM 321
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 126/287 (43%), Gaps = 42/287 (14%)
Query: 73 RGENSVDAEWMAY--LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTD 130
R NSVD +++ + L + L LN+ + R L L M L L+++ +++
Sbjct: 217 RENNSVD-DYLDFNSLKNLKLLTYLNIGENRISDEIGLQFLREMKQLTHLNVAN-MEIGS 274
Query: 131 AGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKL 190
G K + ++ L KL + + GI + ++ L+ L++ + + + L + +L
Sbjct: 275 IGAKIISEMTHLVKLNIGRNDIGRTGIDYIGEMKQLTSLNVQNCNLMEC--KFLCGMKQL 332
Query: 191 EYLDLWGSQVSNRGAAVL-KMFPRLSFLNLAWT-------------GVTKLPNISSLECL 236
+YL++ + + N G ++ K +L FLN++ + LP ++ L L
Sbjct: 333 QYLNISENTIRNEGVDLICKELSQLKFLNISEILSRPYQFRNVLPIKLENLPRLNQLTEL 392
Query: 237 NLSFIQQVGAET-DLVLSLTALQNLN------------------HLERLNLEQTQVSDAT 277
+LS +V E+ +L L L +LN L +LN+ +TQV +
Sbjct: 393 DLSS-DRVNEESLIFLLELKCLTSLNVRRNSITCNCAKIISGMSQLTKLNISETQVDELV 451
Query: 278 LFPLSTFKELIHLSLRNASLTDVS--LHQLSSLSKLTNLSIRDAVLT 322
+ + KEL L ++ L + S + + + LT L I D ++
Sbjct: 452 MEYICGMKELRVLYMQKNYLENDSEVVDLIEKMESLTELDISDCYIS 498
>gi|284800720|ref|YP_003412585.1| Internalin A [Listeria monocytogenes 08-5578]
gi|284993906|ref|YP_003415674.1| Internalin A [Listeria monocytogenes 08-5923]
gi|130774827|gb|ABO32426.1| InlA [Listeria monocytogenes]
gi|167862038|gb|ACA05718.1| InlA [Listeria monocytogenes]
gi|194326145|emb|CAQ77231.1| internalin A [Listeria monocytogenes]
gi|194326165|emb|CAQ77241.1| internalin A [Listeria monocytogenes]
gi|284056282|gb|ADB67223.1| Internalin A [Listeria monocytogenes 08-5578]
gi|284059373|gb|ADB70312.1| Internalin A [Listeria monocytogenes 08-5923]
gi|298359730|gb|ADI77444.1| internalin A [Listeria monocytogenes]
gi|298359786|gb|ADI77472.1| internalin A [Listeria monocytogenes]
gi|298359904|gb|ADI77531.1| internalin A [Listeria monocytogenes]
gi|298359978|gb|ADI77568.1| internalin A [Listeria monocytogenes]
gi|298360068|gb|ADI77613.1| internalin A [Listeria monocytogenes]
gi|298360228|gb|ADI77693.1| internalin A [Listeria monocytogenes]
gi|298360452|gb|ADI77805.1| internalin A [Listeria monocytogenes]
gi|298360556|gb|ADI77857.1| internalin A [Listeria monocytogenes]
gi|298360576|gb|ADI77867.1| internalin A [Listeria monocytogenes]
gi|298360600|gb|ADI77879.1| internalin A [Listeria monocytogenes]
gi|298360678|gb|ADI77918.1| internalin A [Listeria monocytogenes]
gi|443428872|gb|AGC92235.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|112961616|gb|ABI28430.1| internalin A [Listeria monocytogenes]
gi|112961649|gb|ABI28452.1| internalin A [Listeria monocytogenes]
gi|112961652|gb|ABI28454.1| internalin A [Listeria monocytogenes]
gi|112961664|gb|ABI28462.1| internalin A [Listeria monocytogenes]
gi|112961691|gb|ABI28480.1| internalin A [Listeria monocytogenes]
gi|112961718|gb|ABI28498.1| internalin A [Listeria monocytogenes]
gi|112961727|gb|ABI28504.1| internalin A [Listeria monocytogenes]
gi|112961748|gb|ABI28518.1| internalin A [Listeria monocytogenes]
gi|112961751|gb|ABI28520.1| internalin A [Listeria monocytogenes]
gi|112961769|gb|ABI28532.1| internalin A [Listeria monocytogenes]
gi|112961775|gb|ABI28536.1| internalin A [Listeria monocytogenes]
Length = 751
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 112 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 167
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 168 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 221
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 222 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 276
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 277 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 314
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 86 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 143
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 144 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 194
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 195 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 238
>gi|290992226|ref|XP_002678735.1| predicted protein [Naegleria gruberi]
gi|284092349|gb|EFC45991.1| predicted protein [Naegleria gruberi]
Length = 445
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 141/327 (43%), Gaps = 50/327 (15%)
Query: 92 LRSLNVADCRRVTSSALWA--LTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
L+ + AD ++T WA + + LK L++S KV G K + + L KL +S
Sbjct: 64 LKLTHTADNTKITEFTKWAANIAQLEQLKSLEISSDHKVGYDGAKVIGQLKQLTKLDISF 123
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL--------WGSQVS 201
+ A+G + +Q L+ L++ G +T +R + LT L YL++ G
Sbjct: 124 NTIGAEGAKFIGEMQQLTYLNIYGNSLTSEGIRFISQLTNLTYLNVRFNEDFRFGGHDKG 183
Query: 202 NRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVL---SLTA-- 256
GA L+ +L+ L++ G ++ N + FI ++ + T+L + +L A
Sbjct: 184 LEGAQYLRNLQKLTSLDI---GYNQIGNDGA------KFIGEIQSLTELTIRNNNLKAEG 234
Query: 257 ---LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS-LSKLT 312
L L +L L++ + D + + K+L HL L N +T + +S L K+T
Sbjct: 235 VRWLSKLKNLRLLSINNNHIKDEGVVHICKLKQLTHLDLWNTEITAEGIELVSKQLPKVT 294
Query: 313 NLSIRDAVLTNSG--LGSFKPPRSLKL----LDLHGGWLLTEDAILQF------------ 354
+L I V+ + LG K +L+ LD G L L F
Sbjct: 295 HLHISINVIRDGTKFLGEMKQLTTLEADEIELDAEGLKYLVGLKKLNFLSVNNNLFGAEG 354
Query: 355 CKMHPRIEVWHELSVICPSD-QIGSNG 380
CK+ ++ EL C +D IG NG
Sbjct: 355 CKVVSEMKQLEEL---CMNDNNIGDNG 378
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 99/234 (42%), Gaps = 25/234 (10%)
Query: 127 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 186
++ + G K + I +L +L + L A+G+ LS L+NL +L + + D + +
Sbjct: 205 QIGNDGAKFIGEIQSLTELTIRNNNLKAEGVRWLSKLKNLRLLSINNNHIKDEGVVHICK 264
Query: 187 LTKLEYLDLWGSQVSNRGAAVL-KMFPRLSFL----NLAWTGVTKLPNISSLECLNLSFI 241
L +L +LDLW ++++ G ++ K P+++ L N+ G L + L L I
Sbjct: 265 LKQLTHLDLWNTEITAEGIELVSKQLPKVTHLHISINVIRDGTKFLGEMKQLTTLEADEI 324
Query: 242 Q--------QVGAETDLVLSLT----------ALQNLNHLERLNLEQTQVSDATLFPLST 283
+ VG + LS+ + + LE L + + D + L
Sbjct: 325 ELDAEGLKYLVGLKKLNFLSVNNNLFGAEGCKVVSEMKQLEELCMNDNNIGDNGVQYLCE 384
Query: 284 FKELIHLSL--RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSL 335
K L L L N + V L +L+ LT L IR +T S F+ + L
Sbjct: 385 LKSLTSLCLWNNNIGIEGVKLLCSGNLNNLTTLDIRGNQITKSDSHLFENMKQL 438
>gi|219821297|gb|ACL37776.1| internalin A [Listeria monocytogenes]
gi|219821303|gb|ACL37780.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 103 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 158
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 159 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 212
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 213 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 267
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 268 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 305
Score = 44.7 bits (104), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 77 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 134
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 135 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 186 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 229
>gi|219821261|gb|ACL37752.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 103 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 158
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 159 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 212
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 213 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 267
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 268 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 305
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 77 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 134
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 135 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 186 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 229
>gi|371942104|gb|AEX60864.1| internaline [Listeria monocytogenes]
Length = 790
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|255525367|ref|ZP_05392306.1| putative cell wall binding repeat 2-containing protein [Clostridium
carboxidivorans P7]
gi|296187977|ref|ZP_06856369.1| leucine Rich repeat protein [Clostridium carboxidivorans P7]
gi|255510938|gb|EET87239.1| putative cell wall binding repeat 2-containing protein [Clostridium
carboxidivorans P7]
gi|296047103|gb|EFG86545.1| leucine Rich repeat protein [Clostridium carboxidivorans P7]
Length = 660
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 112/218 (51%), Gaps = 35/218 (16%)
Query: 117 LKELDLSRCVKVTD-AGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP 175
+ ELD+S + TD + L +++ L+ L L++T ++ ++ L +L NL L+L
Sbjct: 359 ITELDVSIINEHTDIKDISGLENLTNLQILALTDTEVS--DLSPLKNLTNLQKLNLRCAQ 416
Query: 176 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLEC 235
V+D+ L+ LT L+ L+LW +QVS+ + LK L L+L +P IS
Sbjct: 417 VSDI--SPLKYLTNLQNLNLWCAQVSD--ISPLKDLTNLQKLDL------HIPQISDTSA 466
Query: 236 L-NLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD------------------- 275
L NL+ +QQ+ + V + L+NL +L++LNL++TQVSD
Sbjct: 467 LKNLTNLQQLSLQYTQVSHINGLENLTNLQQLNLDRTQVSDISGLKDLTNLQKLNLNNNQ 526
Query: 276 -ATLFPLSTFKELIHLSLRNASLTDVS-LHQLSSLSKL 311
+ + PL L L L + ++D+S L L++L KL
Sbjct: 527 VSNISPLKYLTNLQELDLSSNQVSDISPLKYLTNLQKL 564
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 93/190 (48%), Gaps = 16/190 (8%)
Query: 88 AFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTD-AGMKHLLSISTLEKLW 146
A + L +L + S + L +T L++L+L R +V+D +G+K
Sbjct: 466 ALKNLTNLQQLSLQYTQVSHINGLENLTNLQQLNLDRT-QVSDISGLK-----DLTNLQK 519
Query: 147 LSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAA 206
L+ I+ L L NL LDL V+D+ L+ LT L+ LDL +QVS+ +
Sbjct: 520 LNLNNNQVSNISPLKYLTNLQELDLSSNQVSDI--SPLKYLTNLQKLDLNNNQVSD--VS 575
Query: 207 VLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERL 266
LK L L L V ++ +IS L+ +L +Q + + + ++ L+ L +L L
Sbjct: 576 PLKYLTNLQDLLL---NVNQISDISPLK--DLINLQGLYLGINQISDISPLKYLINLREL 630
Query: 267 NLEQTQVSDA 276
NL+ TQVSDA
Sbjct: 631 NLKHTQVSDA 640
>gi|219821267|gb|ACL37756.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 103 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 158
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 159 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 212
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 213 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 267
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 268 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 305
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 77 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 134
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 135 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 186 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 229
>gi|112961694|gb|ABI28482.1| internalin A [Listeria monocytogenes]
gi|112961706|gb|ABI28490.1| internalin A [Listeria monocytogenes]
gi|112961763|gb|ABI28528.1| internalin A [Listeria monocytogenes]
Length = 751
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 112 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 167
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 168 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 221
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 222 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 276
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 277 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 314
Score = 44.7 bits (104), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 86 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 143
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 144 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 194
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 195 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 238
>gi|112959522|gb|ABI27288.1| truncated internalin A [Listeria monocytogenes]
Length = 538
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 119/226 (52%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 90 IDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERL 145
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 146 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 200
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++ + + +++ L L L
Sbjct: 201 -TLASLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTN 254
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 255 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 296
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 68 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 125
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 126 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 176
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 177 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 220
>gi|112959438|gb|ABI27246.1| internalin A [Listeria monocytogenes]
gi|112959450|gb|ABI27252.1| internalin A [Listeria monocytogenes]
gi|112959456|gb|ABI27255.1| internalin A [Listeria monocytogenes]
gi|112959496|gb|ABI27275.1| internalin A [Listeria monocytogenes]
gi|112959498|gb|ABI27276.1| internalin A [Listeria monocytogenes]
gi|112959526|gb|ABI27290.1| internalin A [Listeria monocytogenes]
gi|112959528|gb|ABI27291.1| internalin A [Listeria monocytogenes]
Length = 737
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 98 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 153
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 154 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 207
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 208 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 262
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 263 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 300
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 72 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 129
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 130 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 180
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 181 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 224
>gi|112959552|gb|ABI27303.1| internalin A [Listeria monocytogenes]
gi|112959556|gb|ABI27305.1| internalin A [Listeria monocytogenes]
Length = 737
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 98 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 153
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 154 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 207
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 208 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 262
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 263 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 300
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 72 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 129
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 130 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 180
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 181 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 224
>gi|56797877|emb|CAH04900.1| internalin A [Listeria monocytogenes]
Length = 792
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 153 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 208
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 209 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 262
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 263 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 317
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 318 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 355
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 85/168 (50%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++ NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 127 ITPLANSSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 184
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 185 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 235
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 236 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 279
>gi|22347548|gb|AAM95919.1| internalin A precursor [Listeria monocytogenes]
gi|22347558|gb|AAM95924.1| internalin A precursor [Listeria monocytogenes]
gi|22347560|gb|AAM95925.1| internalin A precursor [Listeria monocytogenes]
Length = 744
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 105 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 160
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 161 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 214
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 215 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 269
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 270 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 307
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 79 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 136
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 137 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 187
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 188 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 231
>gi|313485040|gb|ADR52996.1| InlA [Listeria monocytogenes]
Length = 491
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 118/223 (52%), Gaps = 19/223 (8%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIGT--L 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNL 268
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLEL 324
Query: 269 EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 325 NENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|219821285|gb|ACL37768.1| internalin A [Listeria monocytogenes]
gi|219821315|gb|ACL37788.1| internalin A [Listeria monocytogenes]
gi|219821321|gb|ACL37792.1| internalin A [Listeria monocytogenes]
gi|219821327|gb|ACL37796.1| internalin A [Listeria monocytogenes]
gi|219821345|gb|ACL37808.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 116/223 (52%), Gaps = 21/223 (9%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 103 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 158
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G A L
Sbjct: 159 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIGTLASL 214
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNL 268
L N + + L ++ L L L + Q + +++ ++ L L L L
Sbjct: 215 TNLTSLDVANNQISNLAPLSGLTKLTELELGYNQ--------ISNISPIEGLTALTSLEL 266
Query: 269 EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 267 HENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 305
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 87/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I+ L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 77 ISPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 134
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 135 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 186 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTSLDVANNQISN 229
>gi|130774813|gb|ABO32419.1| InlA [Listeria monocytogenes]
Length = 800
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|112961679|gb|ABI28472.1| internalin A [Listeria monocytogenes]
gi|112961682|gb|ABI28474.1| internalin A [Listeria monocytogenes]
gi|112961685|gb|ABI28476.1| internalin A [Listeria monocytogenes]
Length = 751
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 112 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 167
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 168 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 221
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 222 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 276
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 277 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 314
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 86 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 143
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 144 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 194
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 195 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 238
>gi|112961646|gb|ABI28450.1| internalin A [Listeria monocytogenes]
gi|112961721|gb|ABI28500.1| internalin A [Listeria monocytogenes]
gi|112961757|gb|ABI28524.1| internalin A [Listeria monocytogenes]
Length = 751
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 112 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 167
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 168 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 221
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 222 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 276
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 277 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 314
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 86 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 143
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 144 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 194
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 195 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 238
>gi|22347570|gb|AAM95930.1| internalin A precursor [Listeria monocytogenes]
Length = 744
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 105 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 160
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 161 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 214
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 215 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 269
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 270 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 307
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 79 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 136
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 137 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 187
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 188 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 231
>gi|219821369|gb|ACL37824.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 103 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 158
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 159 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 212
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 213 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 267
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 268 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 305
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 77 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 134
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 135 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 186 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 229
>gi|112961667|gb|ABI28464.1| truncated internalin A [Listeria monocytogenes]
Length = 556
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 120/223 (53%), Gaps = 19/223 (8%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 111 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDIS 166
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 167 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 220
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNL 268
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 221 ASLTNLTDLDLANNQISNLAPLSGLTKLTG---LKLGA--NQISNISPLAGLTALTNLEL 275
Query: 269 EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 276 NENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 314
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 86 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 143
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 144 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 194
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 195 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 238
>gi|22347562|gb|AAM95926.1| internalin A precursor [Listeria monocytogenes]
Length = 744
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 105 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 160
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 161 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 214
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 215 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 269
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 270 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 307
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 79 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 136
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 137 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 187
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 188 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 231
>gi|294358389|gb|ADE73847.1| InlA [Listeria monocytogenes]
Length = 800
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|290993458|ref|XP_002679350.1| leucine rich repeat protein [Naegleria gruberi]
gi|284092966|gb|EFC46606.1| leucine rich repeat protein [Naegleria gruberi]
Length = 528
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 160/360 (44%), Gaps = 53/360 (14%)
Query: 117 LKELDLS--RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 174
L+ELDLS C + G+K L S+ L L +S+T A+G+ + ++NL+ L++ +
Sbjct: 130 LRELDLSGQNCYR---EGVKCLKSLKHLTVLNVSKTK-CANGVKYIGMIENLTSLNISSV 185
Query: 175 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT--GVTKLPNISS 232
+ + + L L KL LD+ ++ A ++ L+FL++ G L ISS
Sbjct: 186 HLENQDVEHLSSLKKLTSLDVNNCNLTFEDADIISRLKSLTFLDIGNNDLGPLGLLPISS 245
Query: 233 LECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL 292
+E L I ++ E++ SLT + NL L + + + L +S+ K L L +
Sbjct: 246 MESLQTLHINRIWIESESCESLTKMINLTELY---ISKNDFGNEGLKWISSMKNLRVLDI 302
Query: 293 RNASLTDV----SLHQLSSLSKLTNLSIRDAVLTNSG----------------------- 325
N S+ D + ++SL++LT L+I +T+SG
Sbjct: 303 GNHSIIDALGDEAAKLVASLTQLTYLNISQHEITSSGAKYLTSLTKLTTLFIDGNEICDD 362
Query: 326 -LGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELS--VICPSDQIGSNGPS 382
L S + L L++ GG + + + K+ PR+ + ++S V C S+ + G
Sbjct: 363 FLDSISSLKELTYLNISGGQISVK-GVKSISKL-PRLTIL-DISECVGCCSEVLKQLGLM 419
Query: 383 PSRTSLRASLVKQKQDPMPMSHSFLDQRLKYSREELLELQYSSLSLARPDDSSTQDAMGL 442
TSL SL D + F KY + L+ L Y ++ DD++ + GL
Sbjct: 420 KQLTSLHLSLT----DLVESVEGF-----KYWHKNLINLTYLEMNFCGLDDNAIKWISGL 470
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 145/305 (47%), Gaps = 26/305 (8%)
Query: 48 HLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSA 107
HL LIF + + F +N ++L G+N E + L + ++L LNV+ + ++
Sbjct: 112 HLKYNLLIFTIIQKRF-YNLRELDLSGQNCY-REGVKCLKSLKHLTVLNVSKTK--CANG 167
Query: 108 LWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLS 167
+ + + L L++S V + + ++HL S+ L L ++ LT + ++S L++L+
Sbjct: 168 VKYIGMIENLTSLNISS-VHLENQDVEHLSSLKKLTSLDVNNCNLTFEDADIISRLKSLT 226
Query: 168 VLDLGGL---PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF-------PRLSFL 217
LD+G P+ L + S++ L L +W S ++ KM + F
Sbjct: 227 FLDIGNNDLGPLGLLPISSMESLQTLHINRIWIE--SESCESLTKMINLTELYISKNDFG 284
Query: 218 NLAWTGVTKLPNISSLECLNLSFIQQVGAET-DLVLSLTALQNLNHLERLNLEQTQVSDA 276
N ++ + N+ L+ N S I +G E LV SLT L LN+ Q +++ +
Sbjct: 285 NEGLKWISSMKNLRVLDIGNHSIIDALGDEAAKLVASLT------QLTYLNISQHEITSS 338
Query: 277 TLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF-KPPRSL 335
L++ +L L + + D L +SSL +LT L+I ++ G+ S K PR L
Sbjct: 339 GAKYLTSLTKLTTLFIDGNEICDDFLDSISSLKELTYLNISGGQISVKGVKSISKLPR-L 397
Query: 336 KLLDL 340
+LD+
Sbjct: 398 TILDI 402
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 96/197 (48%), Gaps = 17/197 (8%)
Query: 130 DAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK 189
D K + S++ L L +S+ +T+ G L+SL L+ L + G + D L S+ L +
Sbjct: 313 DEAAKLVASLTQLTYLNISQHEITSSGAKYLTSLTKLTTLFIDGNEICDDFLDSISSLKE 372
Query: 190 LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA-WTG-----VTKLPNISSLECLNLSFIQQ 243
L YL++ G Q+S +G + PRL+ L+++ G + +L + L L+LS
Sbjct: 373 LTYLNISGGQISVKGVKSISKLPRLTILDISECVGCCSEVLKQLGLMKQLTSLHLSL--- 429
Query: 244 VGAETDLVLSLTAL----QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 299
TDLV S+ +NL +L L + + D + +S L +L L++ LTD
Sbjct: 430 ----TDLVESVEGFKYWHKNLINLTYLEMNFCGLDDNAIKWISGLPNLKYLDLQSNDLTD 485
Query: 300 VSLHQLSSLSKLTNLSI 316
+ L + KL LS+
Sbjct: 486 DCIQHLLGMKKLEYLSL 502
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 62/124 (50%), Gaps = 8/124 (6%)
Query: 95 LNVADCRRVTSSALWALTGMTCLKEL-----DLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
L++++C S L L M L L DL V+ K+L++++ LE ++
Sbjct: 400 LDISECVGCCSEVLKQLGLMKQLTSLHLSLTDLVESVEGFKYWHKNLINLTYLE---MNF 456
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
GL + I +S L NL LDL +TD ++ L + KLEYL L+G+ ++ + L+
Sbjct: 457 CGLDDNAIKWISGLPNLKYLDLQSNDLTDDCIQHLLGMKKLEYLSLFGNNMTEKKTKRLE 516
Query: 210 MFPR 213
+ +
Sbjct: 517 KYLK 520
>gi|219821312|gb|ACL37786.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 103 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 158
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 159 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 212
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 213 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 267
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 268 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 305
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 77 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 134
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 135 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 186 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 229
>gi|150371888|dbj|BAF65733.1| internalin A [Listeria monocytogenes]
gi|150371890|dbj|BAF65734.1| internalin A [Listeria monocytogenes]
Length = 797
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|371942096|gb|AEX60860.1| internaline [Listeria monocytogenes]
Length = 790
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|298359896|gb|ADI77527.1| internalin A [Listeria monocytogenes]
Length = 797
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|219821387|gb|ACL37836.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 103 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 158
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 159 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 212
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 213 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 267
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 268 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 305
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 87/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I+ L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 77 ISPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 134
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 135 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 186 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 229
>gi|219821270|gb|ACL37758.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 116/223 (52%), Gaps = 21/223 (9%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 103 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 158
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G A L
Sbjct: 159 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIGTLASL 214
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNL 268
L N + + L ++ L L L + Q + +++ ++ L L L L
Sbjct: 215 TNLTSLDVANNQISNLAPLSGLTKLTELELGYNQ--------ISNISPIEGLTALTSLEL 266
Query: 269 EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 267 HENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 305
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 87/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I+ L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 77 ISPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 134
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 135 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 186 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTSLDVANNQISN 229
>gi|217965469|ref|YP_002351147.1| internalin-A [Listeria monocytogenes HCC23]
gi|386007166|ref|YP_005925444.1| internalin A [Listeria monocytogenes L99]
gi|386025755|ref|YP_005946531.1| internalin A [Listeria monocytogenes M7]
gi|167861970|gb|ACA05684.1| InlA [Listeria monocytogenes]
gi|167861982|gb|ACA05690.1| InlA [Listeria monocytogenes]
gi|217334739|gb|ACK40533.1| internalin-A [Listeria monocytogenes HCC23]
gi|307569976|emb|CAR83155.1| internalin A [Listeria monocytogenes L99]
gi|336022336|gb|AEH91473.1| internalin A [Listeria monocytogenes M7]
Length = 800
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|313485044|gb|ADR52997.1| InlA [Listeria monocytogenes]
Length = 771
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|422408524|ref|ZP_16485485.1| internalin A, partial [Listeria monocytogenes FSL F2-208]
gi|313610685|gb|EFR85741.1| internalin A [Listeria monocytogenes FSL F2-208]
Length = 439
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 117/227 (51%), Gaps = 21/227 (9%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ A + L +LN + T S + L+G+T L++L +VTD +K L +++TLE+L
Sbjct: 32 IDALKNLTNLNRLEITGNTISDISVLSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 87
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 88 DISSNKVS--DISVLAKLTNLERLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIGT 143
Query: 206 -AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLE 264
A L L N + + L ++ L L L + Q + +++ ++ L L
Sbjct: 144 LASLTNLTSLDVANNQISNLAPLSGLTKLTELELGYNQ--------ISNISPIEGLTALT 195
Query: 265 RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 196 SLELHENQLED--ISPISNLKNLTYLALYFNNISDIS--PVSSLTKL 238
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 89/168 (52%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I+ L++L NL+ L L +TD+ +L+ LT L L++ G+ +S+ + L +LS
Sbjct: 10 ISPLANLTNLTGLTLFNNQITDI--DALKNLTNLNRLEITGNTISDISVLSGLTSLQQLS 67
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LERL Q+SD
Sbjct: 68 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLERLIATNNQISD 118
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 119 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTSLDVANNQISN 162
>gi|219821255|gb|ACL37748.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 103 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 158
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 159 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 212
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 213 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 267
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 268 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 305
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 77 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 134
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 135 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 186 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 229
>gi|112961622|gb|ABI28434.1| internalin A [Listeria monocytogenes]
Length = 751
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 112 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 167
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 168 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 221
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 222 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 276
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 277 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 314
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 86 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 143
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 144 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 194
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 195 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 238
>gi|298359724|gb|ADI77441.1| truncated internalin A [Listeria monocytogenes]
gi|298359728|gb|ADI77443.1| truncated internalin A [Listeria monocytogenes]
gi|298359760|gb|ADI77459.1| truncated internalin A [Listeria monocytogenes]
gi|298359768|gb|ADI77463.1| truncated internalin A [Listeria monocytogenes]
gi|298359778|gb|ADI77468.1| truncated internalin A [Listeria monocytogenes]
gi|298359784|gb|ADI77471.1| truncated internalin A [Listeria monocytogenes]
gi|298359796|gb|ADI77477.1| truncated internalin A [Listeria monocytogenes]
gi|298359800|gb|ADI77479.1| truncated internalin A [Listeria monocytogenes]
gi|298359816|gb|ADI77487.1| truncated internalin A [Listeria monocytogenes]
gi|298359840|gb|ADI77499.1| truncated internalin A [Listeria monocytogenes]
gi|298359850|gb|ADI77504.1| truncated internalin A [Listeria monocytogenes]
gi|298359852|gb|ADI77505.1| truncated internalin A [Listeria monocytogenes]
gi|298359860|gb|ADI77509.1| truncated internalin A [Listeria monocytogenes]
gi|298359916|gb|ADI77537.1| truncated internalin A [Listeria monocytogenes]
gi|298359928|gb|ADI77543.1| truncated internalin A [Listeria monocytogenes]
gi|298359936|gb|ADI77547.1| truncated internalin A [Listeria monocytogenes]
gi|298359962|gb|ADI77560.1| truncated internalin A [Listeria monocytogenes]
gi|298359996|gb|ADI77577.1| truncated internalin A [Listeria monocytogenes]
gi|298360016|gb|ADI77587.1| truncated internalin A [Listeria monocytogenes]
gi|298360018|gb|ADI77588.1| truncated internalin A [Listeria monocytogenes]
gi|298360022|gb|ADI77590.1| truncated internalin A [Listeria monocytogenes]
gi|298360024|gb|ADI77591.1| truncated internalin A [Listeria monocytogenes]
gi|298360046|gb|ADI77602.1| truncated internalin A [Listeria monocytogenes]
gi|298360048|gb|ADI77603.1| truncated internalin A [Listeria monocytogenes]
gi|298360058|gb|ADI77608.1| truncated internalin A [Listeria monocytogenes]
gi|298360062|gb|ADI77610.1| truncated internalin A [Listeria monocytogenes]
gi|298360088|gb|ADI77623.1| truncated internalin A [Listeria monocytogenes]
gi|298360120|gb|ADI77639.1| truncated internalin A [Listeria monocytogenes]
gi|298360152|gb|ADI77655.1| truncated internalin A [Listeria monocytogenes]
gi|298360168|gb|ADI77663.1| truncated internalin A [Listeria monocytogenes]
gi|298360204|gb|ADI77681.1| truncated internalin A [Listeria monocytogenes]
gi|298360210|gb|ADI77684.1| truncated internalin A [Listeria monocytogenes]
gi|298360224|gb|ADI77691.1| truncated internalin A [Listeria monocytogenes]
gi|298360248|gb|ADI77703.1| truncated internalin A [Listeria monocytogenes]
gi|298360250|gb|ADI77704.1| truncated internalin A [Listeria monocytogenes]
gi|298360272|gb|ADI77715.1| truncated internalin A [Listeria monocytogenes]
gi|298360308|gb|ADI77733.1| truncated internalin A [Listeria monocytogenes]
gi|298360340|gb|ADI77749.1| truncated internalin A [Listeria monocytogenes]
gi|298360382|gb|ADI77770.1| truncated internalin A [Listeria monocytogenes]
gi|298360392|gb|ADI77775.1| truncated internalin A [Listeria monocytogenes]
gi|298360408|gb|ADI77783.1| truncated internalin A [Listeria monocytogenes]
gi|298360418|gb|ADI77788.1| truncated internalin A [Listeria monocytogenes]
gi|298360430|gb|ADI77794.1| truncated internalin A [Listeria monocytogenes]
gi|298360438|gb|ADI77798.1| truncated internalin A [Listeria monocytogenes]
gi|298360444|gb|ADI77801.1| truncated internalin A [Listeria monocytogenes]
gi|298360446|gb|ADI77802.1| truncated internalin A [Listeria monocytogenes]
gi|298360476|gb|ADI77817.1| truncated internalin A [Listeria monocytogenes]
gi|298360482|gb|ADI77820.1| truncated internalin A [Listeria monocytogenes]
gi|298360484|gb|ADI77821.1| truncated internalin A [Listeria monocytogenes]
gi|298360486|gb|ADI77822.1| truncated internalin A [Listeria monocytogenes]
gi|298360490|gb|ADI77824.1| truncated internalin A [Listeria monocytogenes]
gi|298360512|gb|ADI77835.1| truncated internalin A [Listeria monocytogenes]
gi|298360526|gb|ADI77842.1| truncated internalin A [Listeria monocytogenes]
gi|298360534|gb|ADI77846.1| truncated internalin A [Listeria monocytogenes]
gi|298360574|gb|ADI77866.1| truncated internalin A [Listeria monocytogenes]
gi|298360584|gb|ADI77871.1| truncated internalin A [Listeria monocytogenes]
gi|298360618|gb|ADI77888.1| truncated internalin A [Listeria monocytogenes]
gi|298360622|gb|ADI77890.1| truncated internalin A [Listeria monocytogenes]
gi|298360626|gb|ADI77892.1| truncated internalin A [Listeria monocytogenes]
gi|298360628|gb|ADI77893.1| truncated internalin A [Listeria monocytogenes]
gi|298360646|gb|ADI77902.1| truncated internalin A [Listeria monocytogenes]
gi|298360650|gb|ADI77904.1| truncated internalin A [Listeria monocytogenes]
gi|298360664|gb|ADI77911.1| truncated internalin A [Listeria monocytogenes]
gi|298360686|gb|ADI77922.1| truncated internalin A [Listeria monocytogenes]
gi|298360702|gb|ADI77930.1| truncated internalin A [Listeria monocytogenes]
gi|298360718|gb|ADI77938.1| truncated internalin A [Listeria monocytogenes]
gi|443428870|gb|AGC92234.1| truncated internalin A [Listeria monocytogenes]
Length = 605
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 118/223 (52%), Gaps = 19/223 (8%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNL 268
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLEL 324
Query: 269 EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 325 NENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|112961778|gb|ABI28538.1| internalin A [Listeria monocytogenes]
Length = 696
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 57 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 112
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 113 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 166
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 167 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 221
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 222 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 259
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 31 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 88
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 89 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 139
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 140 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 183
>gi|322952090|gb|ADX21044.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|167862040|gb|ACA05719.1| InlA [Listeria monocytogenes]
gi|194326153|emb|CAQ77235.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|112961781|gb|ABI28540.1| internalin A [Listeria monocytogenes]
Length = 696
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 57 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 112
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 113 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 166
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 167 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 221
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 222 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 259
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 31 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 88
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 89 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 139
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 140 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 183
>gi|112959444|gb|ABI27249.1| truncated internalin A [Listeria monocytogenes]
gi|112959490|gb|ABI27272.1| truncated internalin A [Listeria monocytogenes]
Length = 542
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 120/223 (53%), Gaps = 19/223 (8%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 97 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDIS 152
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 153 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 206
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNL 268
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 207 ASLTNLTDLDLANNQISNLAPLSGLTKLTG---LKLGA--NQISNISPLAGLTALTNLEL 261
Query: 269 EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 262 NENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 300
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 72 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 129
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 130 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 180
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 181 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 224
>gi|85679220|gb|ABC72026.1| InlA [Listeria monocytogenes]
Length = 794
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 215
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 269
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 270 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLAALTNLELN 324
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 325 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 362
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 134 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 191
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 192 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 242
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 243 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 286
>gi|85679224|gb|ABC72028.1| InlA [Listeria monocytogenes]
Length = 794
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 215
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 269
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 270 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 324
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 325 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 362
Score = 44.7 bits (104), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 134 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 191
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 192 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 242
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 243 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 286
>gi|322952085|gb|ADX21042.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|167862012|gb|ACA05705.1| InlA [Listeria monocytogenes]
Length = 797
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|443428800|gb|AGC92199.1| truncated internalin A [Listeria monocytogenes]
gi|443428802|gb|AGC92200.1| truncated internalin A [Listeria monocytogenes]
gi|443428806|gb|AGC92202.1| truncated internalin A [Listeria monocytogenes]
gi|443428824|gb|AGC92211.1| truncated internalin A [Listeria monocytogenes]
gi|443428830|gb|AGC92214.1| truncated internalin A [Listeria monocytogenes]
gi|443428832|gb|AGC92215.1| truncated internalin A [Listeria monocytogenes]
gi|443428834|gb|AGC92216.1| truncated internalin A [Listeria monocytogenes]
Length = 797
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|371942076|gb|AEX60850.1| internaline [Listeria monocytogenes]
gi|371942078|gb|AEX60851.1| internaline [Listeria monocytogenes]
gi|371942082|gb|AEX60853.1| internaline [Listeria monocytogenes]
Length = 789
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|298360648|gb|ADI77903.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|298360122|gb|ADI77640.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|254854324|ref|ZP_05243672.1| internalin A [Listeria monocytogenes FSL R2-503]
gi|300766414|ref|ZP_07076370.1| internalin A precursor [Listeria monocytogenes FSL N1-017]
gi|404279991|ref|YP_006680889.1| internalin A [Listeria monocytogenes SLCC2755]
gi|404285805|ref|YP_006692391.1| internalin A [Listeria monocytogenes serotype 7 str. SLCC2482]
gi|405754532|ref|YP_006677996.1| internalin A [Listeria monocytogenes SLCC2540]
gi|130774761|gb|ABO32395.1| InlA [Listeria monocytogenes]
gi|130774765|gb|ABO32397.1| InlA [Listeria monocytogenes]
gi|130774775|gb|ABO32402.1| InlA [Listeria monocytogenes]
gi|150371872|dbj|BAF65725.1| internalin A [Listeria monocytogenes]
gi|150371878|dbj|BAF65728.1| internalin A [Listeria monocytogenes]
gi|150371880|dbj|BAF65729.1| internalin A [Listeria monocytogenes]
gi|150371882|dbj|BAF65730.1| internalin A [Listeria monocytogenes]
gi|150371884|dbj|BAF65731.1| internalin A [Listeria monocytogenes]
gi|150371886|dbj|BAF65732.1| internalin A [Listeria monocytogenes]
gi|167861936|gb|ACA05667.1| InlA [Listeria monocytogenes]
gi|167861950|gb|ACA05674.1| InlA [Listeria monocytogenes]
gi|167861974|gb|ACA05686.1| InlA [Listeria monocytogenes]
gi|167861990|gb|ACA05694.1| InlA [Listeria monocytogenes]
gi|194239386|emb|CAQ76833.1| internalin A [Listeria monocytogenes]
gi|194239390|emb|CAQ76835.1| internalin A [Listeria monocytogenes]
gi|194239398|emb|CAQ76839.1| internalin A [Listeria monocytogenes]
gi|194326159|emb|CAQ77238.1| internalin A [Listeria monocytogenes]
gi|223006782|gb|ACM69348.1| internalin A [Listeria monocytogenes]
gi|258607720|gb|EEW20328.1| internalin A [Listeria monocytogenes FSL R2-503]
gi|290350822|dbj|BAI78332.1| internalin A [Listeria monocytogenes]
gi|290350824|dbj|BAI78333.1| internalin A [Listeria monocytogenes]
gi|298359734|gb|ADI77446.1| internalin A [Listeria monocytogenes]
gi|298359740|gb|ADI77449.1| internalin A [Listeria monocytogenes]
gi|298359774|gb|ADI77466.1| internalin A [Listeria monocytogenes]
gi|298359822|gb|ADI77490.1| internalin A [Listeria monocytogenes]
gi|298359826|gb|ADI77492.1| internalin A [Listeria monocytogenes]
gi|298359830|gb|ADI77494.1| internalin A [Listeria monocytogenes]
gi|298359834|gb|ADI77496.1| internalin A [Listeria monocytogenes]
gi|298359836|gb|ADI77497.1| internalin A [Listeria monocytogenes]
gi|298359846|gb|ADI77502.1| internalin A [Listeria monocytogenes]
gi|298359848|gb|ADI77503.1| internalin A [Listeria monocytogenes]
gi|298359854|gb|ADI77506.1| internalin A [Listeria monocytogenes]
gi|298359856|gb|ADI77507.1| internalin A [Listeria monocytogenes]
gi|298359868|gb|ADI77513.1| internalin A [Listeria monocytogenes]
gi|298359870|gb|ADI77514.1| internalin A [Listeria monocytogenes]
gi|298359888|gb|ADI77523.1| internalin A [Listeria monocytogenes]
gi|298359920|gb|ADI77539.1| internalin A [Listeria monocytogenes]
gi|298359954|gb|ADI77556.1| internalin A [Listeria monocytogenes]
gi|298359968|gb|ADI77563.1| internalin A [Listeria monocytogenes]
gi|298359972|gb|ADI77565.1| internalin A [Listeria monocytogenes]
gi|298359984|gb|ADI77571.1| internalin A [Listeria monocytogenes]
gi|298359998|gb|ADI77578.1| internalin A [Listeria monocytogenes]
gi|298360002|gb|ADI77580.1| internalin A [Listeria monocytogenes]
gi|298360006|gb|ADI77582.1| internalin A [Listeria monocytogenes]
gi|298360040|gb|ADI77599.1| internalin A [Listeria monocytogenes]
gi|298360042|gb|ADI77600.1| internalin A [Listeria monocytogenes]
gi|298360044|gb|ADI77601.1| internalin A [Listeria monocytogenes]
gi|298360050|gb|ADI77604.1| internalin A [Listeria monocytogenes]
gi|298360080|gb|ADI77619.1| internalin A [Listeria monocytogenes]
gi|298360090|gb|ADI77624.1| internalin A [Listeria monocytogenes]
gi|298360100|gb|ADI77629.1| internalin A [Listeria monocytogenes]
gi|298360126|gb|ADI77642.1| internalin A [Listeria monocytogenes]
gi|298360150|gb|ADI77654.1| internalin A [Listeria monocytogenes]
gi|298360156|gb|ADI77657.1| internalin A [Listeria monocytogenes]
gi|298360166|gb|ADI77662.1| internalin A [Listeria monocytogenes]
gi|298360188|gb|ADI77673.1| internalin A [Listeria monocytogenes]
gi|298360190|gb|ADI77674.1| internalin A [Listeria monocytogenes]
gi|298360194|gb|ADI77676.1| internalin A [Listeria monocytogenes]
gi|298360220|gb|ADI77689.1| internalin A [Listeria monocytogenes]
gi|298360222|gb|ADI77690.1| internalin A [Listeria monocytogenes]
gi|298360238|gb|ADI77698.1| internalin A [Listeria monocytogenes]
gi|298360246|gb|ADI77702.1| internalin A [Listeria monocytogenes]
gi|298360260|gb|ADI77709.1| internalin A [Listeria monocytogenes]
gi|298360264|gb|ADI77711.1| internalin A [Listeria monocytogenes]
gi|298360266|gb|ADI77712.1| internalin A [Listeria monocytogenes]
gi|298360294|gb|ADI77726.1| internalin A [Listeria monocytogenes]
gi|298360298|gb|ADI77728.1| internalin A [Listeria monocytogenes]
gi|298360312|gb|ADI77735.1| internalin A [Listeria monocytogenes]
gi|298360318|gb|ADI77738.1| internalin A [Listeria monocytogenes]
gi|298360356|gb|ADI77757.1| internalin A [Listeria monocytogenes]
gi|298360368|gb|ADI77763.1| internalin A [Listeria monocytogenes]
gi|298360396|gb|ADI77777.1| internalin A [Listeria monocytogenes]
gi|298360398|gb|ADI77778.1| internalin A [Listeria monocytogenes]
gi|298360400|gb|ADI77779.1| internalin A [Listeria monocytogenes]
gi|298360428|gb|ADI77793.1| internalin A [Listeria monocytogenes]
gi|298360434|gb|ADI77796.1| internalin A [Listeria monocytogenes]
gi|298360448|gb|ADI77803.1| internalin A [Listeria monocytogenes]
gi|298360462|gb|ADI77810.1| internalin A [Listeria monocytogenes]
gi|298360498|gb|ADI77828.1| internalin A [Listeria monocytogenes]
gi|298360502|gb|ADI77830.1| internalin A [Listeria monocytogenes]
gi|298360510|gb|ADI77834.1| internalin A [Listeria monocytogenes]
gi|298360514|gb|ADI77836.1| internalin A [Listeria monocytogenes]
gi|298360558|gb|ADI77858.1| internalin A [Listeria monocytogenes]
gi|298360560|gb|ADI77859.1| internalin A [Listeria monocytogenes]
gi|298360566|gb|ADI77862.1| internalin A [Listeria monocytogenes]
gi|298360586|gb|ADI77872.1| internalin A [Listeria monocytogenes]
gi|298360614|gb|ADI77886.1| internalin A [Listeria monocytogenes]
gi|298360630|gb|ADI77894.1| internalin A [Listeria monocytogenes]
gi|298360638|gb|ADI77898.1| internalin A [Listeria monocytogenes]
gi|298360652|gb|ADI77905.1| internalin A [Listeria monocytogenes]
gi|298360680|gb|ADI77919.1| internalin A [Listeria monocytogenes]
gi|298360682|gb|ADI77920.1| internalin A [Listeria monocytogenes]
gi|298360694|gb|ADI77926.1| internalin A [Listeria monocytogenes]
gi|298360704|gb|ADI77931.1| internalin A [Listeria monocytogenes]
gi|298360706|gb|ADI77932.1| internalin A [Listeria monocytogenes]
gi|300512880|gb|EFK39971.1| internalin A precursor [Listeria monocytogenes FSL N1-017]
gi|302034315|gb|ADK92311.1| internalin A [Listeria monocytogenes]
gi|302034317|gb|ADK92312.1| internalin A [Listeria monocytogenes]
gi|404223732|emb|CBY75094.1| internalin A (LPXTG motif) [Listeria monocytogenes SLCC2540]
gi|404226626|emb|CBY48031.1| internalin A (LPXTG motif) [Listeria monocytogenes SLCC2755]
gi|404244734|emb|CBY02959.1| internalin A (LPXTG motif) [Listeria monocytogenes serotype 7 str.
SLCC2482]
Length = 800
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|112961787|gb|ABI28544.1| internalin A [Listeria monocytogenes]
Length = 696
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 57 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 112
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 113 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 166
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 167 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 221
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 222 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 259
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 31 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 88
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 89 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 139
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 140 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 183
>gi|56797879|emb|CAH04901.1| internalin A [Listeria monocytogenes]
Length = 483
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 118/223 (52%), Gaps = 19/223 (8%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 152 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 207
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 208 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIGT--L 261
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNL 268
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 262 ASLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLEL 316
Query: 269 EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 317 NENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 355
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 127 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 184
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 185 FGN-QVTDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 235
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 236 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 279
>gi|25151694|ref|NP_741249.1| Protein C02F5.7, isoform a [Caenorhabditis elegans]
gi|351020643|emb|CCD62632.1| Protein C02F5.7, isoform a [Caenorhabditis elegans]
Length = 461
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 157/348 (45%), Gaps = 55/348 (15%)
Query: 70 IELRG-ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC--LKELDLSRCV 126
+ L+G EN D+ + L L++ C+RVT ++ L G C L L+L C
Sbjct: 128 LSLKGCENVHDSALRTFTSRCPNLEHLSLYRCKRVTDASCENL-GRYCHKLNYLNLENCS 186
Query: 127 KVTDAGMKHL----LSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLR 182
+TD MK++ ++S L W + G+ ++ L N LD L+LR
Sbjct: 187 SITDRAMKYIGDGCPNLSYLNISWCD--AIQDRGVQII--LSNCKSLDT-------LILR 235
Query: 183 SLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN-ISSLECLNLSFI 241
+ LT+ +++GS ++ GA +K L L V + N ++LE L +S
Sbjct: 236 GCEGLTE----NVFGSVEAHMGA--IKKLNLLQCFQLTDITVQNIANGATALEYLCMSNC 289
Query: 242 QQVGAETDL----------VLSLTAL------------QNLNHLERLNLEQTQ-VSDATL 278
Q+ + + VL L+ + LERL++E +SD T+
Sbjct: 290 NQISDRSLVSLGQHSHNLKVLELSGCTLLGDNGFIPLARGCRQLERLDMEDCSLISDHTI 349
Query: 279 FPLST-FKELIHLSLRNASL-TDVSLHQLSSLSKLT-NLSIRDAV--LTNSGLGSFKPPR 333
L+ L LSL + L TD S+ L+S + T N+ D LT+S L + +
Sbjct: 350 NSLANNCTALRELSLSHCELITDESIQNLASKHRETLNVLELDNCPQLTDSTLSHLRHCK 409
Query: 334 SLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELS-VICPSDQIGSNG 380
+LK +DL+ ++++AI++F P IE+ + V P+DQ+ + G
Sbjct: 410 ALKRIDLYDCQNVSKEAIVRFQHHRPNIEIHAYFAPVTPPTDQVVNRG 457
>gi|322952088|gb|ADX21043.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|25151696|ref|NP_741248.1| Protein C02F5.7, isoform b [Caenorhabditis elegans]
gi|78099811|sp|P34284.3|YKK7_CAEEL RecName: Full=Uncharacterized F-box/LRR-repeat protein C02F5.7
gi|351020644|emb|CCD62633.1| Protein C02F5.7, isoform b [Caenorhabditis elegans]
Length = 466
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 157/348 (45%), Gaps = 55/348 (15%)
Query: 70 IELRG-ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC--LKELDLSRCV 126
+ L+G EN D+ + L L++ C+RVT ++ L G C L L+L C
Sbjct: 128 LSLKGCENVHDSALRTFTSRCPNLEHLSLYRCKRVTDASCENL-GRYCHKLNYLNLENCS 186
Query: 127 KVTDAGMKHL----LSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLR 182
+TD MK++ ++S L W + G+ ++ L N LD L+LR
Sbjct: 187 SITDRAMKYIGDGCPNLSYLNISWCD--AIQDRGVQII--LSNCKSLD-------TLILR 235
Query: 183 SLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN-ISSLECLNLSFI 241
+ LT+ +++GS ++ GA +K L L V + N ++LE L +S
Sbjct: 236 GCEGLTE----NVFGSVEAHMGA--IKKLNLLQCFQLTDITVQNIANGATALEYLCMSNC 289
Query: 242 QQVGAETDL----------VLSLTAL------------QNLNHLERLNLEQTQ-VSDATL 278
Q+ + + VL L+ + LERL++E +SD T+
Sbjct: 290 NQISDRSLVSLGQHSHNLKVLELSGCTLLGDNGFIPLARGCRQLERLDMEDCSLISDHTI 349
Query: 279 FPLST-FKELIHLSLRNASL-TDVSLHQLSSLSKLT-NLSIRDAV--LTNSGLGSFKPPR 333
L+ L LSL + L TD S+ L+S + T N+ D LT+S L + +
Sbjct: 350 NSLANNCTALRELSLSHCELITDESIQNLASKHRETLNVLELDNCPQLTDSTLSHLRHCK 409
Query: 334 SLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELS-VICPSDQIGSNG 380
+LK +DL+ ++++AI++F P IE+ + V P+DQ+ + G
Sbjct: 410 ALKRIDLYDCQNVSKEAIVRFQHHRPNIEIHAYFAPVTPPTDQVVNRG 457
>gi|313485077|gb|ADR53009.1| InlA [Listeria monocytogenes]
Length = 800
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|294358397|gb|ADE73851.1| InlA [Listeria monocytogenes]
Length = 800
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|226223065|ref|YP_002757172.1| Internalin A [Listeria monocytogenes serotype 4b str. CLIP 80459]
gi|386731210|ref|YP_006204706.1| internalin A [Listeria monocytogenes 07PF0776]
gi|406703224|ref|YP_006753578.1| internalin A (LPXTG motif) [Listeria monocytogenes L312]
gi|167861892|gb|ACA05645.1| InlA [Listeria monocytogenes]
gi|167861914|gb|ACA05656.1| InlA [Listeria monocytogenes]
gi|167861978|gb|ACA05688.1| InlA [Listeria monocytogenes]
gi|194239396|emb|CAQ76838.1| internalin A [Listeria monocytogenes]
gi|225875527|emb|CAS04230.1| Internalin A [Listeria monocytogenes serotype 4b str. CLIP 80459]
gi|298359780|gb|ADI77469.1| internalin A [Listeria monocytogenes]
gi|384389968|gb|AFH79038.1| internalin A [Listeria monocytogenes 07PF0776]
gi|406360254|emb|CBY66527.1| internalin A (LPXTG motif) [Listeria monocytogenes L312]
Length = 800
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|112961784|gb|ABI28542.1| internalin A [Listeria monocytogenes]
gi|112961796|gb|ABI28550.1| internalin A [Listeria monocytogenes]
Length = 696
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 57 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 112
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 113 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 166
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 167 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 221
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 222 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 259
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 31 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 88
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 89 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 139
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 140 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 183
>gi|85679228|gb|ABC72030.1| InlA [Listeria monocytogenes]
Length = 794
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 215
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 269
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 270 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 324
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 325 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 362
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 134 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 191
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 192 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 242
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 243 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 286
>gi|298360360|gb|ADI77759.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|112959464|gb|ABI27259.1| internalin A [Listeria monocytogenes]
Length = 698
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 59 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 114
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 115 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 168
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 169 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 223
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 224 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 261
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 33 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 90
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 91 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 141
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 142 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 185
>gi|85679222|gb|ABC72027.1| InlA [Listeria monocytogenes]
Length = 791
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 117/227 (51%), Gaps = 21/227 (9%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ A + L +LN + T S + L+G+T L++L +VTD +K L +++TLE+L
Sbjct: 156 IDALKNLTNLNRLEITGNTISDISVLSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 211
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 212 DISSNKVS--DISVLAKLTNLERLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIGT 267
Query: 206 -AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLE 264
A L L N + + L ++ L L L + Q + +++ ++ L L
Sbjct: 268 LASLTNLTSLDVANNQISNLAPLSGLTKLTELELGYNQ--------ISNISPIEGLTALT 319
Query: 265 RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 320 SLELHENQLED--ISPISNLKNLTYLALYFNNISDIS--PVSSLTKL 362
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 89/168 (52%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I+ L++L NL+ L L +TD+ +L+ LT L L++ G+ +S+ + L +LS
Sbjct: 134 ISPLANLTNLTGLTLFNNQITDI--DALKNLTNLNRLEITGNTISDISVLSGLTSLQQLS 191
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LERL Q+SD
Sbjct: 192 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLERLIATNNQISD 242
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 243 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTSLDVANNQISN 286
>gi|298360700|gb|ADI77929.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|298359892|gb|ADI77525.1| internalin A [Listeria monocytogenes]
gi|298360422|gb|ADI77790.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|26336707|dbj|BAC32036.1| unnamed protein product [Mus musculus]
Length = 423
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 162/342 (47%), Gaps = 26/342 (7%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC-LKELDLSRCVK 127
+ LRG V D+ + R + LN+ C ++T S ++L+ LK LDL+ CV
Sbjct: 83 LSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVS 142
Query: 128 VTDAGMKHLL-SISTLEKLWLSETG-LTADGI-ALLSSLQNLSVLDLGGLP-VTDLVLRS 183
VT++ +K + LE L LS +T +GI AL+ + L L L G + D L+
Sbjct: 143 VTNSSLKGISEGCRNLEYLNLSWCDQITKEGIEALVRGCRGLKALLLRGCTQLEDEALKH 202
Query: 184 LQV-LTKLEYLDLWG-SQVSNRGAA-VLKMFPRLSFLNLAWTGVTKLPNIS----SLECL 236
+Q +L L+L S++++ G + + RL L L +G + L + S L C
Sbjct: 203 IQNHCHELVSLNLQSCSRITDDGVVQICRGCHRLQALCL--SGCSNLTDASLTALGLNCP 260
Query: 237 NLSFIQQVGAE--TDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTF-KELIHLSL 292
L ++ TD +L A +N + LE+++LE+ ++D+TL LS +L LSL
Sbjct: 261 RLQVLEAARCSHLTDASFTLLA-RNCHELEKMDLEECVLITDSTLVQLSIHCPKLQALSL 319
Query: 293 RNASL-TDVSLHQLSSLS----KLTNLSIRDAVL-TNSGLGSFKPPRSLKLLDLHGGWLL 346
+ L TD + LSS + +L L + + +L T++ L + R L+ L+L+ +
Sbjct: 320 SHCELITDEGILHLSSSTCGHERLRVLELDNCLLVTDASLEHLENCRGLERLELYDCQQV 379
Query: 347 TEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSL 388
T I + P ++V + + P + +G R +
Sbjct: 380 TRAGIKRMRAQLPHVKVHAYFAPVTPPPAVAGSGHRLCRCCV 421
>gi|313485046|gb|ADR52998.1| InlA [Listeria monocytogenes]
Length = 774
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|17546520|ref|NP_519922.1| GALA protein 3 [Ralstonia solanacearum GMI1000]
Length = 522
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 131/323 (40%), Gaps = 44/323 (13%)
Query: 34 LERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENS-VDAEWMAYLGAFRYL 92
L RLP L+R +R + I + ++ L N + E L A L
Sbjct: 150 LSRLP------LVRLNVRNKRIGAEGARLLANHPTLTSLNVSNGRIGPEGAQALAANTRL 203
Query: 93 RSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGL 152
+LNV+ R+ + AL L+ LD+S ++ D G + L + + L L + G+
Sbjct: 204 TTLNVSG-NRIGVAGAKALAANQTLRSLDVSDN-RIGDEGARELAACTQLTTLDANRNGI 261
Query: 153 TADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFP 212
DG L++ + L+ L +GG + D + +L +L L++ + V G L
Sbjct: 262 GVDGATALAASRTLTSLAIGGNEIGDAGVLALAANARLTTLNVESTGVGADGVKALAASK 321
Query: 213 RLSFL-----NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLN 267
L++L ++ G T L +SL L+L ++GAE AL L L+
Sbjct: 322 TLTWLRLDGNDIGNAGATALAASTSLTTLHLEH-SRIGAE-----GAQALAANTKLTTLD 375
Query: 268 LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLG 327
L + DA + LS L+ LS+R +L D S AV
Sbjct: 376 LGYNDIGDAGVRALSANATLVWLSVRRNNLEDAS-----------------AV------- 411
Query: 328 SFKPPRSLKLLDLHGGWLLTEDA 350
S ++L LD+ G + + A
Sbjct: 412 SLAAGKTLTTLDISGNGIQDQGA 434
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 104/265 (39%), Gaps = 51/265 (19%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSR----------- 124
N + L A + LRSL+V+D R+ L T L LD +R
Sbjct: 211 NRIGVAGAKALAANQTLRSLDVSD-NRIGDEGARELAACTQLTTLDANRNGIGVDGATAL 269
Query: 125 ------------CVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLG 172
++ DAG+ L + + L L + TG+ ADG+ L++ + L+ L L
Sbjct: 270 AASRTLTSLAIGGNEIGDAGVLALAANARLTTLNVESTGVGADGVKALAASKTLTWLRLD 329
Query: 173 GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISS 232
G + + +L T L L L S++ GA L +L+ L+L + +
Sbjct: 330 GNDIGNAGATALAASTSLTTLHLEHSRIGAEGAQALAANTKLTTLDLGYNDIGD------ 383
Query: 233 LECLNLSFIQQVGAETDLV-LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 291
+ ++ + A LV LS + R NLE DA+ L+ K L L
Sbjct: 384 ------AGVRALSANATLVWLS---------VRRNNLE-----DASAVSLAAGKTLTTLD 423
Query: 292 LRNASLTDVSLHQLSSLSKLTNLSI 316
+ + D L++ LT L +
Sbjct: 424 ISGNGIQDQGAKALAANPTLTTLDV 448
>gi|313485048|gb|ADR52999.1| InlA [Listeria monocytogenes]
gi|313485083|gb|ADR53012.1| InlA [Listeria monocytogenes]
Length = 800
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|254825753|ref|ZP_05230754.1| internalin A [Listeria monocytogenes FSL J1-194]
gi|255521302|ref|ZP_05388539.1| internalin A [Listeria monocytogenes FSL J1-175]
gi|130774771|gb|ABO32400.1| InlA [Listeria monocytogenes]
gi|130774777|gb|ABO32403.1| InlA [Listeria monocytogenes]
gi|130774779|gb|ABO32404.1| InlA [Listeria monocytogenes]
gi|150371874|dbj|BAF65726.1| internalin A [Listeria monocytogenes]
gi|150371876|dbj|BAF65727.1| internalin A [Listeria monocytogenes]
gi|223006790|gb|ACM69352.1| internalin A [Listeria monocytogenes]
gi|290350838|dbj|BAI78340.1| internalin A [Listeria monocytogenes]
gi|293594997|gb|EFG02758.1| internalin A [Listeria monocytogenes FSL J1-194]
gi|298359742|gb|ADI77450.1| internalin A [Listeria monocytogenes]
gi|298359744|gb|ADI77451.1| internalin A [Listeria monocytogenes]
gi|298359756|gb|ADI77457.1| internalin A [Listeria monocytogenes]
gi|298359790|gb|ADI77474.1| internalin A [Listeria monocytogenes]
gi|298359872|gb|ADI77515.1| internalin A [Listeria monocytogenes]
gi|298359880|gb|ADI77519.1| internalin A [Listeria monocytogenes]
gi|298359942|gb|ADI77550.1| internalin A [Listeria monocytogenes]
gi|298359946|gb|ADI77552.1| internalin A [Listeria monocytogenes]
gi|298360032|gb|ADI77595.1| internalin A [Listeria monocytogenes]
gi|298360064|gb|ADI77611.1| internalin A [Listeria monocytogenes]
gi|298360114|gb|ADI77636.1| internalin A [Listeria monocytogenes]
gi|298360202|gb|ADI77680.1| internalin A [Listeria monocytogenes]
gi|298360282|gb|ADI77720.1| internalin A [Listeria monocytogenes]
gi|298360284|gb|ADI77721.1| internalin A [Listeria monocytogenes]
gi|298360314|gb|ADI77736.1| internalin A [Listeria monocytogenes]
gi|298360330|gb|ADI77744.1| internalin A [Listeria monocytogenes]
gi|298360346|gb|ADI77752.1| internalin A [Listeria monocytogenes]
gi|298360410|gb|ADI77784.1| internalin A [Listeria monocytogenes]
gi|298360420|gb|ADI77789.1| internalin A [Listeria monocytogenes]
gi|298360440|gb|ADI77799.1| internalin A [Listeria monocytogenes]
gi|298360454|gb|ADI77806.1| internalin A [Listeria monocytogenes]
gi|298360470|gb|ADI77814.1| internalin A [Listeria monocytogenes]
gi|298360494|gb|ADI77826.1| internalin A [Listeria monocytogenes]
gi|298360506|gb|ADI77832.1| internalin A [Listeria monocytogenes]
gi|298360604|gb|ADI77881.1| internalin A [Listeria monocytogenes]
gi|298360610|gb|ADI77884.1| internalin A [Listeria monocytogenes]
gi|298360612|gb|ADI77885.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|130774755|gb|ABO32392.1| InlA [Listeria monocytogenes]
gi|130774767|gb|ABO32398.1| InlA [Listeria monocytogenes]
gi|298359732|gb|ADI77445.1| internalin A [Listeria monocytogenes]
gi|298360004|gb|ADI77581.1| internalin A [Listeria monocytogenes]
gi|298360478|gb|ADI77818.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|313485079|gb|ADR53010.1| InlA [Listeria monocytogenes]
Length = 800
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|51850107|dbj|BAD42395.1| leucine-rich repeat protein [Ralstonia solanacearum]
Length = 538
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 130/323 (40%), Gaps = 44/323 (13%)
Query: 34 LERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENS-VDAEWMAYLGAFRYL 92
L RLP L+R +R + I + ++ L N + E L A L
Sbjct: 166 LSRLP------LVRLNVRNKRIGAEGARLLANHPTLTSLNVSNGRIGPEGAQALAANTRL 219
Query: 93 RSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGL 152
+LNV+ R+ + AL L+ LD+S ++ D G + L + + L L + G+
Sbjct: 220 TTLNVSG-NRIGVAGAKALAANQTLRSLDVSDN-RIGDEGARELAACTQLTTLDANRNGI 277
Query: 153 TADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFP 212
DG L++ + L+ L +GG + D + +L +L L++ + V G L
Sbjct: 278 GVDGATALAASRTLTSLAIGGNEIGDAGVLALAANARLTTLNVESTGVGADGVKALAASK 337
Query: 213 RLSFL-----NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLN 267
L++L ++ G T L +SL L+L ++GAE AL L L+
Sbjct: 338 TLTWLRLDGNDIGNAGATALAASTSLTTLHLEH-SRIGAE-----GAQALAANTKLTTLD 391
Query: 268 LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLG 327
L + DA + LS L+ LS+R +L D S L++ LT L
Sbjct: 392 LGYNDIGDAGVRTLSANATLVWLSVRRNNLEDASAVSLAAGKTLTTL------------- 438
Query: 328 SFKPPRSLKLLDLHGGWLLTEDA 350
D+ G + + A
Sbjct: 439 -----------DISGNGIQDQGA 450
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 104/265 (39%), Gaps = 51/265 (19%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSR----------- 124
N + L A + LRSL+V+D R+ L T L LD +R
Sbjct: 227 NRIGVAGAKALAANQTLRSLDVSD-NRIGDEGARELAACTQLTTLDANRNGIGVDGATAL 285
Query: 125 ------------CVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLG 172
++ DAG+ L + + L L + TG+ ADG+ L++ + L+ L L
Sbjct: 286 AASRTLTSLAIGGNEIGDAGVLALAANARLTTLNVESTGVGADGVKALAASKTLTWLRLD 345
Query: 173 GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISS 232
G + + +L T L L L S++ GA L +L+ L+L + +
Sbjct: 346 GNDIGNAGATALAASTSLTTLHLEHSRIGAEGAQALAANTKLTTLDLGYNDIGD------ 399
Query: 233 LECLNLSFIQQVGAETDLV-LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 291
+ ++ + A LV LS + R NLE DA+ L+ K L L
Sbjct: 400 ------AGVRTLSANATLVWLS---------VRRNNLE-----DASAVSLAAGKTLTTLD 439
Query: 292 LRNASLTDVSLHQLSSLSKLTNLSI 316
+ + D L++ LT L +
Sbjct: 440 ISGNGIQDQGAKALAANPTLTTLDV 464
>gi|298359924|gb|ADI77541.1| internalin A [Listeria monocytogenes]
gi|298359926|gb|ADI77542.1| internalin A [Listeria monocytogenes]
gi|298360172|gb|ADI77665.1| internalin A [Listeria monocytogenes]
gi|298360388|gb|ADI77773.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|47096525|ref|ZP_00234116.1| internalin E [Listeria monocytogenes str. 1/2a F6854]
gi|254913501|ref|ZP_05263513.1| internalin E [Listeria monocytogenes J2818]
gi|254937918|ref|ZP_05269615.1| internalin E [Listeria monocytogenes F6900]
gi|386045908|ref|YP_005964240.1| internalin E [Listeria monocytogenes J0161]
gi|47015116|gb|EAL06058.1| internalin E [Listeria monocytogenes str. 1/2a F6854]
gi|258610527|gb|EEW23135.1| internalin E [Listeria monocytogenes F6900]
gi|293591509|gb|EFF99843.1| internalin E [Listeria monocytogenes J2818]
gi|345532899|gb|AEO02340.1| internalin E [Listeria monocytogenes J0161]
Length = 499
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 107/229 (46%), Gaps = 21/229 (9%)
Query: 156 GIALLSSLQ---NLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMF 211
GI + LQ NLS L+L VTDL L LTK+ L+L G+ + + A A LK
Sbjct: 85 GITTIEGLQYLTNLSELELIDNQVTDL--NPLTNLTKITELELSGNPLKDVSALAGLKNL 142
Query: 212 PRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 271
+ + T VT L +S+L+ LNL Q + +T L L++L+ L+ T
Sbjct: 143 KTMDLIYTDITDVTPLAGLSNLQVLNLDINQ--------ITDITPLAGLSNLQFLSFGST 194
Query: 272 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP 331
QVSD T PL+ +L L+ N+ ++DVS L+ LS LT + + + + S +
Sbjct: 195 QVSDLT--PLANLSKLTTLNAMNSKVSDVS--PLTGLSNLTEVYLEENQI--SDVSPLAK 248
Query: 332 PRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNG 380
+L ++ L + + Q + P + +I P D I NG
Sbjct: 249 LPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAP-DTISDNG 296
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 22/197 (11%)
Query: 106 SALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQN 165
+ + L +T L EL+L +VTD + L +++ + +L LS G ++ L+ L+N
Sbjct: 87 TTIEGLQYLTNLSELELIDN-QVTD--LNPLTNLTKITELELS--GNPLKDVSALAGLKN 141
Query: 166 LSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV- 224
L +DL +TD+ L L+ L+ L+L +Q+++ L L FL+ T V
Sbjct: 142 LKTMDLIYTDITDVT--PLAGLSNLQVLNLDINQITD--ITPLAGLSNLQFLSFGSTQVS 197
Query: 225 --TKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 282
T L N+S L LN A V ++ L L++L + LE+ Q+SD + PL+
Sbjct: 198 DLTPLANLSKLTTLN--------AMNSKVSDVSPLTGLSNLTEVYLEENQISDVS--PLA 247
Query: 283 TFKELIHLSLRNASLTD 299
L ++L N ++T+
Sbjct: 248 KLPNLSIVTLTNQTITN 264
>gi|130774759|gb|ABO32394.1| InlA [Listeria monocytogenes]
gi|298360132|gb|ADI77645.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|197098444|ref|NP_001127056.1| F-box/LRR-repeat protein 2 [Pongo abelii]
gi|75070406|sp|Q5R3Z8.1|FBXL2_PONAB RecName: Full=F-box/LRR-repeat protein 2; AltName: Full=F-box and
leucine-rich repeat protein 2
gi|55733683|emb|CAH93518.1| hypothetical protein [Pongo abelii]
Length = 423
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 161/342 (47%), Gaps = 26/342 (7%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC-LKELDLSRCVK 127
+ LRG V D+ + R + LN+ C ++T S ++L+ LK LDL+ CV
Sbjct: 83 LSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVS 142
Query: 128 VTDAGMKHLL-SISTLEKLWLSETG-LTADGI-ALLSSLQNLSVLDLGGLP-VTDLVLRS 183
+T++ +K + LE L LS +T DGI AL+ + L L L G + D L+
Sbjct: 143 ITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKH 202
Query: 184 LQ-VLTKLEYLDLWG-SQVSNRGAA-VLKMFPRLSFLNLAWTGVTKLPNIS----SLECL 236
+Q +L L+L S++++ G + + RL L L +G + L + S L C
Sbjct: 203 IQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCL--SGCSNLTDASLTALGLNCP 260
Query: 237 NLSFIQQVGAE--TDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTF-KELIHLSL 292
L ++ TD +L A +N + LE+++LE+ ++D+TL LS +L LSL
Sbjct: 261 RLQILEAARCSHLTDAGFTLLA-RNCHELEKMDLEECILITDSTLIQLSIHCPKLQALSL 319
Query: 293 RNASL-TDVSLHQLSSLS----KLTNLSIRDAVL-TNSGLGSFKPPRSLKLLDLHGGWLL 346
+ L TD + LS+ + +L L + + +L T+ L + R L+ L+L+ +
Sbjct: 320 SHCELITDDGILHLSNSTCGHERLRVLELDNCLLITDVALEHLENCRGLERLELYDCQQV 379
Query: 347 TEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSL 388
T I + P ++V + + P + +G R +
Sbjct: 380 TRAGIKRMRAQLPHVKVHAYFAPVTPPTAVTGSGQRLCRCCV 421
>gi|371942140|gb|AEX60882.1| internaline [Listeria monocytogenes]
Length = 790
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|341897280|gb|EGT53215.1| hypothetical protein CAEBREN_03873 [Caenorhabditis brenneri]
Length = 460
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 178/399 (44%), Gaps = 49/399 (12%)
Query: 15 EAACQSGESVQKWRR--------QRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHN 66
+A C+S + + W QR L + +++ +L RR F
Sbjct: 74 KALCRSAQVCRSWNVLALDGSNWQRVDLFTFQRDVKTAVVENLARRCGGF---------- 123
Query: 67 AEAIELRG-ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC--LKELDLS 123
+ + L+G EN D+ + L L++ C+RVT ++ L G C L+ L+L
Sbjct: 124 LKELSLKGCENVHDSALRTFTSRCPNLEHLSLYRCKRVTDASCENL-GRYCHKLQYLNLE 182
Query: 124 RCVKVTDAGMKHLL-SISTLEKLWLSETGLTAD-GIALL-SSLQNLSVLDLGGL------ 174
C +TD M+++ L L +S D G+ ++ ++ +L L L G
Sbjct: 183 NCSSITDRAMRYIGDGCPNLTYLNISWCDAVQDRGVQIIITNCLSLDTLILRGCEGLTEN 242
Query: 175 ---PVTDLV--LRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKL-P 228
PV + + L+ L +L + D+ ++N GA +L+ + L + L
Sbjct: 243 VFGPVEEQMGALKKLNLLQCFQLTDITVQNIAN-GAKILEYLCMSNCNQLTDRSLVSLGQ 301
Query: 229 NISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLST-FKE 286
N +L+ L LS +G L L+ Q LERL++E VSD T+ L+
Sbjct: 302 NSHNLKVLELSGCNLLGDNGFLQLARGCKQ----LERLDIEDCSLVSDNTINALANQCSA 357
Query: 287 LIHLSLRNASL-TDVSLHQLSSLSK--LTNLSIRDA-VLTNSGLGSFKPPRSLKLLDLHG 342
L LSL + L TD S+ L++ + L L + + LT+S L + ++LK +DL+
Sbjct: 358 LRELSLSHCELITDESIQNLATKHRESLHVLELDNCPQLTDSTLSHLRHCKALKRIDLYD 417
Query: 343 GWLLTEDAILQFCKMHPRIEVWHELS-VICPSDQIGSNG 380
+++DAI++F P IE+ + V P+DQ+ + G
Sbjct: 418 CQNVSKDAIVRFQHHRPNIEIHAYFAPVTPPADQVVNRG 456
>gi|340376197|ref|XP_003386620.1| PREDICTED: f-box/LRR-repeat protein 13-like [Amphimedon
queenslandica]
Length = 820
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 119/261 (45%), Gaps = 20/261 (7%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMT---CLKELDLSR 124
+ + L G + + + LG + + SLN+ADC RV+ + + + L+EL+L+
Sbjct: 526 QVVYLAGCTKISDQGLKSLGHLKKIHSLNLADCSRVSDAGVRYIVEHNSGPVLRELNLTN 585
Query: 125 CVKVTDAG-MKHLLSISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDLGGLPVTDLVLR 182
C K++D ++ L L LS +D G+ LL+ L NL LD+ G +TDL +
Sbjct: 586 CAKISDVTPLRIAQHCRNLMYLNLSFCEHISDTGVELLTQLSNLVDLDVTGCSLTDLGVI 645
Query: 183 SLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQ 242
+L KL +L L S+V A++KM L+ L + N+S E + +
Sbjct: 646 ALGQNKKLMHLGL--SEVDVTDDAIIKMAKGLNNLQII--------NLSCCEVKHF-ILN 694
Query: 243 QVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELI-HLSLRNASLTDV 300
A TD + A N L ++ L + D+T L+ + H+ L S+TD
Sbjct: 695 PPLALTDACVQALAF-NCQLLIKVYLAACPHLGDSTAKYLAQGCTWVQHIDLSGTSITDQ 753
Query: 301 SLHQLS-SLSKLTNLSIRDAV 320
+L L S LT L I V
Sbjct: 754 ALRHLGKSCHHLTQLDILSCV 774
>gi|371942142|gb|AEX60883.1| internaline [Listeria monocytogenes]
Length = 790
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|194239378|emb|CAQ76829.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 119/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L ++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNKISDIS--PVSSLTKL 363
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|195430566|ref|XP_002063325.1| GK21848 [Drosophila willistoni]
gi|194159410|gb|EDW74311.1| GK21848 [Drosophila willistoni]
Length = 543
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 98/184 (53%), Gaps = 14/184 (7%)
Query: 92 LRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET 150
L L + DC+R++ AL + G+T LK ++LS CV VTD+G+KHL + LE+L L
Sbjct: 353 LEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDSGLKHLARMPKLEQLNLRSC 412
Query: 151 GLTAD-GIALLS-SLQNLSVLDLGGL-PVTDLVLRSL-QVLTKLEYLDLWGSQVSNRGA- 205
+D G+A L+ ++ LD+ ++D L + Q L +L L L Q++++G
Sbjct: 413 DNISDIGMAYLTEGGSGINSLDVSFCDKISDQALTHIAQGLYRLRSLSLNQCQITDQGML 472
Query: 206 AVLKMFPRLSFLNLAWT------GVTKLP-NISSLECLNLSFIQQVGAE-TDLVLSLTAL 257
+ K L LN+ G+ L ++++L+ ++L Q+ ++ D+++ L L
Sbjct: 473 KIAKSLQELENLNIGQCSRITDKGLQTLAEDLTNLKTIDLYGCTQLTSKGIDIIMKLPKL 532
Query: 258 QNLN 261
Q LN
Sbjct: 533 QKLN 536
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 127/282 (45%), Gaps = 54/282 (19%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSIS------- 140
R L +L + C +T++ L + G+ LK L+L C ++D G+ HL S
Sbjct: 291 LRNLETLELGGCCNITNTGLLLIAWGLKKLKHLNLRSCWHISDQGIGHLAGFSRETAEGN 350
Query: 141 -TLEKLWLSET--------GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLE 191
LE L L + G A G+ L S+ NLS + VTD L+ L + KLE
Sbjct: 351 LQLEYLGLQDCQRLSDEALGHIAQGLTSLKSI-NLSFC----VSVTDSGLKHLARMPKLE 405
Query: 192 YLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDL 250
L+L +S+ G A +L +G+ L++SF ++ +D
Sbjct: 406 QLNLRSCDNISDIGMA---------YLTEGGSGINS---------LDVSFCDKI---SDQ 444
Query: 251 VLSLTALQNLNHLERLNLEQTQVSDATLFPLS-TFKELIHLSLRNAS-LTDVSLHQLSSL 308
L+ A Q L L L+L Q Q++D + ++ + +EL +L++ S +TD L L+
Sbjct: 445 ALTHIA-QGLYRLRSLSLNQCQITDQGMLKIAKSLQELENLNIGQCSRITDKGLQTLA-- 501
Query: 309 SKLTNLSIRD----AVLTNSGLGSFKPPRSLKLLDLHGGWLL 346
LTNL D LT+ G+ L+ L+L G WL+
Sbjct: 502 EDLTNLKTIDLYGCTQLTSKGIDIIMKLPKLQKLNL-GLWLV 542
>gi|298359764|gb|ADI77461.1| truncated internalin A [Listeria monocytogenes]
gi|298359862|gb|ADI77510.1| truncated internalin A [Listeria monocytogenes]
gi|298360070|gb|ADI77614.1| truncated internalin A [Listeria monocytogenes]
gi|298360108|gb|ADI77633.1| truncated internalin A [Listeria monocytogenes]
gi|298360174|gb|ADI77666.1| truncated internalin A [Listeria monocytogenes]
gi|298360196|gb|ADI77677.1| truncated internalin A [Listeria monocytogenes]
gi|298360268|gb|ADI77713.1| truncated internalin A [Listeria monocytogenes]
gi|298360290|gb|ADI77724.1| truncated internalin A [Listeria monocytogenes]
gi|298360536|gb|ADI77847.1| truncated internalin A [Listeria monocytogenes]
gi|298360608|gb|ADI77883.1| truncated internalin A [Listeria monocytogenes]
gi|298360658|gb|ADI77908.1| truncated internalin A [Listeria monocytogenes]
gi|298360684|gb|ADI77921.1| truncated internalin A [Listeria monocytogenes]
Length = 605
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 120/223 (53%), Gaps = 19/223 (8%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNL 268
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKLTG---LKLGA--NQISNISPLAGLTALTNLEL 324
Query: 269 EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 325 NENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|158299381|ref|XP_319486.4| AGAP010289-PA [Anopheles gambiae str. PEST]
gi|157014337|gb|EAA14603.5| AGAP010289-PA [Anopheles gambiae str. PEST]
Length = 381
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 91/173 (52%), Gaps = 10/173 (5%)
Query: 58 SLLEVFKH--NAEAIELRGENSVDAEWMAYLGA--FRYLRSLNVADCRRVTSSALWALT- 112
SL + +H N E +EL G +++ ++ A L L + DC+R++ AL +
Sbjct: 177 SLGRITQHLKNIEVLELGGCSNITNTGLSKETADGTPALEYLGLQDCQRLSDEALRHIAQ 236
Query: 113 GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTAD-GIALLSSLQN-LSVLD 170
G+T L+ ++LS CV VTD+G+KHL +S LE+L L +D G+A L+ N +S LD
Sbjct: 237 GLTSLRSINLSFCVSVTDSGLKHLARMSRLEELNLRACDNISDIGMAYLTEGCNSISTLD 296
Query: 171 LGGL-PVTDLVLRSL-QVLTKLEYLDLWGSQVSNRG-AAVLKMFPRLSFLNLA 220
+ V D + + Q L +L L L Q+++ G + + K L LN+
Sbjct: 297 VSFCDKVADQAMVHISQGLFQLRSLSLSACQITDEGLSRIAKSLHDLETLNIG 349
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 132/307 (42%), Gaps = 66/307 (21%)
Query: 57 PSLL-EVFKHNAEAIELRGENSVD-AEWMAYLGAFRYLRSLNVADCRRVTSSALWALT-G 113
P+L + K + +++ N D A A+ F L+ LN++ C++VT S+L +T
Sbjct: 125 PTLFGSLVKRGIKRVQVGCYNITDMAIGHAFAADFPNLKVLNLSLCKQVTDSSLGRITQH 184
Query: 114 MTCLKELDLSRCVKVTDAGMKHLLSIST--LEKLWLSETGLTAD--------GIALLSSL 163
+ ++ L+L C +T+ G+ + T LE L L + +D G+ L S+
Sbjct: 185 LKNIEVLELGGCSNITNTGLSKETADGTPALEYLGLQDCQRLSDEALRHIAQGLTSLRSI 244
Query: 164 QNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWT 222
NLS + VTD L+ L +++LE L+L +S+ G A L
Sbjct: 245 -NLSFC----VSVTDSGLKHLARMSRLEELNLRACDNISDIGMAYLT------------- 286
Query: 223 GVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 282
+S+ L++SF +V + + +S Q L L L+L Q++D L ++
Sbjct: 287 -----EGCNSISTLDVSFCDKVADQAMVHIS----QGLFQLRSLSLSACQITDEGLSRIA 337
Query: 283 TFKELIHLSLRNASLTDVSLHQLSSLSKLTN--LSIRDAVLTNSGLGSFKPPRSLKLLDL 340
SL D+ + S++T+ L I A L N L+ +DL
Sbjct: 338 ------------KSLHDLETLNIGQCSRITDRGLEIVAAELIN-----------LRAIDL 374
Query: 341 HGGWLLT 347
+G LT
Sbjct: 375 YGCTRLT 381
>gi|371942068|gb|AEX60846.1| internaline [Listeria monocytogenes]
gi|371942088|gb|AEX60856.1| internaline [Listeria monocytogenes]
gi|371942106|gb|AEX60865.1| internaline [Listeria monocytogenes]
gi|371942134|gb|AEX60879.1| internaline [Listeria monocytogenes]
Length = 790
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|403278782|ref|XP_003930966.1| PREDICTED: F-box/LRR-repeat protein 2 [Saimiri boliviensis
boliviensis]
Length = 423
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 161/342 (47%), Gaps = 26/342 (7%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC-LKELDLSRCVK 127
+ LRG V D+ + R + LN+ C ++T S ++L+ LK LDL+ CV
Sbjct: 83 LSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVS 142
Query: 128 VTDAGMKHLL-SISTLEKLWLSETG-LTADGI-ALLSSLQNLSVLDLGGLP-VTDLVLRS 183
+T++ +K + LE L LS +T DGI AL+ + L L L G + D L+
Sbjct: 143 ITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKH 202
Query: 184 LQ-VLTKLEYLDLWG-SQVSNRGAAVL-KMFPRLSFLNLAWTGVTKLPNIS----SLECL 236
+Q +L L+L S++++ G L + RL L L +G + L + S L C
Sbjct: 203 IQNYCHELVSLNLQSCSRITDEGVVQLCRGCHRLQALCL--SGCSNLTDASLTALGLNCP 260
Query: 237 NLSFIQQVGAE--TDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTF-KELIHLSL 292
L ++ TD +L A +N + LE+++LE+ ++D+TL LS +L LSL
Sbjct: 261 RLQILEAARCSHLTDAGFTLLA-RNCHELEKMDLEECILITDSTLIQLSIHCPKLQALSL 319
Query: 293 RNASL-TDVSLHQLSSLS----KLTNLSIRDAVL-TNSGLGSFKPPRSLKLLDLHGGWLL 346
+ L TD + LS+ + +L L + + +L T+ L + R L+ L+L+ +
Sbjct: 320 SHCELITDDGILHLSNSTCGHERLRVLELDNCLLITDVALEHLENCRGLERLELYDCQQV 379
Query: 347 TEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSL 388
T I + P ++V + + P + +G R +
Sbjct: 380 TRAGIKRMRAQLPHVKVHAYFAPVTPPTAVAGSGQRLCRCCV 421
>gi|294358393|gb|ADE73849.1| InlA [Listeria monocytogenes]
Length = 800
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 119/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKEIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L ++ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKEIG--TLASLTNLTDLDLANNQISN 287
>gi|290994554|ref|XP_002679897.1| leucine rich repeat domain protein [Naegleria gruberi]
gi|284093515|gb|EFC47153.1| leucine rich repeat domain protein [Naegleria gruberi]
Length = 331
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 83/168 (49%), Gaps = 10/168 (5%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N + + + F+ L SL + D ++ + ++GMT L ELD+S + G
Sbjct: 116 GGNEIGLQGAKIVSEFKQLTSLYI-DSSQIGTEGAKLISGMTKLTELDISANYLCAE-GA 173
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
K + + L L +S + + +GI +S ++NL+ LD+ G + +S+ + +L YL
Sbjct: 174 KSISGMDHLTFLNISSSNIDQEGIKSISEMKNLTKLDICGNNLGAEGAKSISQMKQLTYL 233
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWT--------GVTKLPNISSL 233
+ + + + GA + +L+ LN+ + ++++PN++ L
Sbjct: 234 KAYTNSLRSEGAIFISELDKLTTLNICYNEIGDEGAKAISQMPNLTDL 281
>gi|38194513|gb|AAR13263.1| F-box and leucine-rich repeat protein 13 transcript variant 2 [Homo
sapiens]
Length = 690
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 133/281 (47%), Gaps = 21/281 (7%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLK--ELDLSRCVKVTDAGMKHLL-SISTLEK 144
F L++L++A CRR T L L G C K LDLS C +V+ G +++ S + +
Sbjct: 295 FHNLQNLSLAYCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQVSVQGFRYIANSCTGIMH 354
Query: 145 LWLSETGLTADGI--ALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQ-V 200
L +++ D AL+ ++ L G P ++D R+L KL + G++ V
Sbjct: 355 LTINDMPTLTDNCVKALVEKCSRITSLVFTGAPHISDCTFRALSA-CKLRKIRFEGNKRV 413
Query: 201 SNRGAAVL-KMFPRLSFLNLA-WTGVT-----KLPNISSLECLNLSFIQQVGAETDLVLS 253
++ + K +P LS + +A G+T L + L LNL+ ++G + L
Sbjct: 414 TDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIG-DMGLKQF 472
Query: 254 LTALQNLNHLERLNLEQ-TQVSDATLFPLST-FKELIHLSLRNAS-LTDVSLHQLSSLSK 310
L ++ + LNL ++SDA++ LS L +LSLRN LT + + ++
Sbjct: 473 LDGPASM-RIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNIFS 531
Query: 311 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 351
L ++ + ++N GL + LK L + + +T+D I
Sbjct: 532 LVSIDLSGTDISNEGLNVLSRHKKLKELSVSECYRITDDGI 572
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 120/256 (46%), Gaps = 48/256 (18%)
Query: 117 LKELDLSRCVKVTDAGMKHLL-SISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 171
L+EL++S C TD M+H+ + L LS T +T + LL +LQNLS+
Sbjct: 247 LQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQNLSLAYC 306
Query: 172 GGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWTGVTKL 227
TD L+ L + KL YLDL G +QVS +G ++ + TG+ L
Sbjct: 307 RRF--TDKGLQYLNLGNGCHKLIYLDLSGCTQVSVQG---------FRYIANSCTGIMHL 355
Query: 228 -----PNISSLECLNLSFIQQVGAETDLVLS------------LTALQNLNHLERLNLE- 269
P ++ C+ + +++ T LV + L+A + L ++ E
Sbjct: 356 TINDMPTLTD-NCVK-ALVEKCSRITSLVFTGAPHISDCTFRALSACK----LRKIRFEG 409
Query: 270 QTQVSDATL-FPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGL 326
+V+DA+ F + L H+ + + +TD SL LS L +LT L++ + V + + GL
Sbjct: 410 NKRVTDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGL 469
Query: 327 GSF-KPPRSLKLLDLH 341
F P S+++ +L+
Sbjct: 470 KQFLDGPASMRIRELN 485
>gi|421877770|ref|ZP_16309310.1| Internalin F [Leuconostoc citreum LBAE C10]
gi|421879575|ref|ZP_16311039.1| Internalin F [Leuconostoc citreum LBAE C11]
gi|372556467|emb|CCF25430.1| Internalin F [Leuconostoc citreum LBAE C10]
gi|390446546|emb|CCF27159.1| Internalin F [Leuconostoc citreum LBAE C11]
Length = 672
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 144/318 (45%), Gaps = 56/318 (17%)
Query: 41 LADSLLRHLIRRRLIFPSLLEVFKHNAEAI---ELRGENSVDAEWMAYLGAFRYLRSLNV 97
L D L+ ++ R+L +EV + N + I L EN + + + Y L+SL++
Sbjct: 44 LPDQQLKDILTRQL----GMEVTQQNIQTITSLNLSYENVTNLKGLEYATN---LQSLDL 96
Query: 98 ADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGI 157
+ + L L +T L L L++ D L + +L L+ + G I
Sbjct: 97 SGSNISDLTPLQNLHQLTVL-NLRLNKASIPPDLAPIENLKLQSLN-LFADDYGNYVSRI 154
Query: 158 ALLSSLQNLSVLDLGGLPVTDL-VLRSLQVLT-------KLEYLDLWGSQVSN------- 202
+ ++ LS LDLG + DL ++ +L+ LT L+ LD SQ+SN
Sbjct: 155 MPIRNMTTLSSLDLGDNALNDLNIIHNLKNLTYLSLSKNNLQNLDGL-SQISNIETLRLE 213
Query: 203 ----RGAAVLKMFPRLSFLNLAWTGV---TKLPNISSLECLNLSFIQQVGAE-------- 247
L L +L+L V T L NIS+L+ L LS +
Sbjct: 214 YNKLSNIDQLSKMKHLKYLSLGDNSVSDLTPLKNISTLQELTLSQMSLTNTNLNSLSNLS 273
Query: 248 ---------TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLT 298
D + SLTAL NL +L++L+ +T VSD L P+S+ K L +LS NAS++
Sbjct: 274 NLTKLSIDFNDKITSLTALTNLTNLQQLDFSKTSVSD--LSPVSSLKNLTNLSFSNASVS 331
Query: 299 DVSLHQLSSLSKLTNLSI 316
D+S L SL+ LT L++
Sbjct: 332 DIS--PLRSLNNLTTLNM 347
>gi|149178243|ref|ZP_01856836.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
gi|148842892|gb|EDL57262.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
Length = 254
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 64/118 (54%), Gaps = 6/118 (5%)
Query: 127 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 186
K+TD +K L +S ++ L L T +T+ G+A L L+ L+ L L V D L+ LQ
Sbjct: 65 KITDETLKTLAGLSKVDSLNLRGTEVTSAGLAQLQHLKALTHLHLEKTKVNDAGLKHLQQ 124
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN------ISSLECLNL 238
L LEYL+L+G+++++ G + L +L L + T VT+ I+ LE + L
Sbjct: 125 LPNLEYLNLYGTEITDAGLSQLSSLKKLKRLYVWQTKVTRPAGLALQEQITGLEVIGL 182
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 227 LPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 286
L +S ++ LNL + A L LQ+L L L+LE+T+V+DA L L
Sbjct: 74 LAGLSKVDSLNLRGTEVTSA------GLAQLQHLKALTHLHLEKTKVNDAGLKHLQQLPN 127
Query: 287 LIHLSLRNASLTDVSLHQLSSLSKLTNLSI 316
L +L+L +TD L QLSSL KL L +
Sbjct: 128 LEYLNLYGTEITDAGLSQLSSLKKLKRLYV 157
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 147 LSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAA 206
LS+ +T + + L+ L + L+L G VT L LQ L L +L L ++V++ G
Sbjct: 61 LSDQKITDETLKTLAGLSKVDSLNLRGTEVTSAGLAQLQHLKALTHLHLEKTKVNDAGLK 120
Query: 207 VLKMFPRLSFLNLAWTGVTK--LPNISSLECLNLSFIQQV 244
L+ P L +LNL T +T L +SSL+ L ++ Q
Sbjct: 121 HLQQLPNLEYLNLYGTEITDAGLSQLSSLKKLKRLYVWQT 160
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 41/86 (47%)
Query: 253 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 312
+L L L+ ++ LNL T+V+ A L L K L HL L + D L L L L
Sbjct: 70 TLKTLAGLSKVDSLNLRGTEVTSAGLAQLQHLKALTHLHLEKTKVNDAGLKHLQQLPNLE 129
Query: 313 NLSIRDAVLTNSGLGSFKPPRSLKLL 338
L++ +T++GL + LK L
Sbjct: 130 YLNLYGTEITDAGLSQLSSLKKLKRL 155
Score = 38.1 bits (87), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 258 QNLNHLE-RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 316
QN + LE +L +++D TL L+ ++ L+LR +T L QL L LT+L +
Sbjct: 50 QNDDRLEIAFHLSDQKITDETLKTLAGLSKVDSLNLRGTEVTSAGLAQLQHLKALTHLHL 109
Query: 317 RDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMH--PRIEVWH 365
+ ++GL + +L+ L+L+G +T+ + Q + R+ VW
Sbjct: 110 EKTKVNDAGLKHLQQLPNLEYLNLYGTE-ITDAGLSQLSSLKKLKRLYVWQ 159
>gi|298360724|gb|ADI77941.1| truncated internalin A [Listeria monocytogenes]
Length = 403
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 118/223 (52%), Gaps = 19/223 (8%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIGT--L 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNL 268
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLEL 324
Query: 269 EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 325 NENQLEDIS--PISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGN-QVTDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|371942070|gb|AEX60847.1| internaline [Listeria monocytogenes]
Length = 789
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|290989491|ref|XP_002677371.1| Hypothetical protein NAEGRDRAFT_67509 [Naegleria gruberi]
gi|284090978|gb|EFC44627.1| Hypothetical protein NAEGRDRAFT_67509 [Naegleria gruberi]
Length = 350
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 134/279 (48%), Gaps = 9/279 (3%)
Query: 53 RLIFPSLLEVFK-HNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWAL 111
++ +LL+ F N ++LR N + A+ +LG L LNV D + A+ ++
Sbjct: 57 NILLETLLKSFSGRNLTKLDLR-RNFIHAKLAEHLGNLHQLTDLNVDDSF-IVEPAIDSI 114
Query: 112 TGMTCLKELDL-SRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLD 170
+T L L + S +K + +K + + L L +++ + + G LL +L NL++L+
Sbjct: 115 RYLTKLSTLSINSNNLKTKE--LKIIKEMKQLTVLSIAKNSMQSGGAKLLRNLSNLTILN 172
Query: 171 LGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNI 230
+ + + + L + +L L++ G+ +S+ G + L FP L+ LN + +
Sbjct: 173 ISNNRIGNEGWKYLCSMKQLTKLNISGTNISSEGISYLTNFPNLTELNFSGNTSLRFSQK 232
Query: 231 SSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERL---NLEQTQVSDATLFPLSTFKEL 287
+ L ++ ++ + + LQ ++ LE+L +L+ + DA+ +S ++L
Sbjct: 233 VQEQLSELKYLTKLVINYIHPIPIDDLQYIHKLEKLTSLSLKSNFMYDASAIHISKCEKL 292
Query: 288 IHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 326
+L + +L+D + S L L L+I + L+ G+
Sbjct: 293 TYLDVAINNLSDAAAEAFSHLPNLKYLNISENYLSKKGV 331
>gi|30519963|ref|NP_848739.1| F-box/LRR-repeat protein 2 [Mus musculus]
gi|38502820|sp|Q8BH16.1|FBXL2_MOUSE RecName: Full=F-box/LRR-repeat protein 2; AltName: Full=F-box and
leucine-rich repeat protein 2
gi|26332971|dbj|BAC30203.1| unnamed protein product [Mus musculus]
gi|26337583|dbj|BAC32477.1| unnamed protein product [Mus musculus]
gi|26354813|dbj|BAC41033.1| unnamed protein product [Mus musculus]
gi|66910228|gb|AAH96582.1| F-box and leucine-rich repeat protein 2 [Mus musculus]
gi|74189881|dbj|BAE24574.1| unnamed protein product [Mus musculus]
gi|148676994|gb|EDL08941.1| F-box and leucine-rich repeat protein 2, isoform CRA_b [Mus
musculus]
gi|148878226|gb|AAI45666.1| F-box and leucine-rich repeat protein 2 [Mus musculus]
gi|148878391|gb|AAI45999.1| F-box and leucine-rich repeat protein 2 [Mus musculus]
Length = 423
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 162/342 (47%), Gaps = 26/342 (7%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC-LKELDLSRCVK 127
+ LRG V D+ + R + LN+ C ++T S ++L+ LK LDL+ CV
Sbjct: 83 LSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVS 142
Query: 128 VTDAGMKHLL-SISTLEKLWLSETG-LTADGI-ALLSSLQNLSVLDLGGLP-VTDLVLRS 183
VT++ +K + LE L LS +T +GI AL+ + L L L G + D L+
Sbjct: 143 VTNSSLKGISEGCRNLEYLNLSWCDQITKEGIEALVRGCRGLKALLLRGCTQLEDEALKH 202
Query: 184 LQV-LTKLEYLDLWG-SQVSNRGAA-VLKMFPRLSFLNLAWTGVTKLPNIS----SLECL 236
+Q +L L+L S++++ G + + RL L L +G + L + S L C
Sbjct: 203 IQNHCHELVSLNLQSCSRITDDGVVQICRGCHRLQALCL--SGCSNLTDASLTALGLNCP 260
Query: 237 NLSFIQQVGAE--TDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTF-KELIHLSL 292
L ++ TD +L A +N + LE+++LE+ ++D+TL LS +L LSL
Sbjct: 261 RLQVLEAARCSHLTDAGFTLLA-RNCHELEKMDLEECVLITDSTLVQLSIHCPKLQALSL 319
Query: 293 RNASL-TDVSLHQLSSLS----KLTNLSIRDAVL-TNSGLGSFKPPRSLKLLDLHGGWLL 346
+ L TD + LSS + +L L + + +L T++ L + R L+ L+L+ +
Sbjct: 320 SHCELITDEGILHLSSSTCGHERLRVLELDNCLLVTDASLEHLENCRGLERLELYDCQQV 379
Query: 347 TEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSL 388
T I + P ++V + + P + +G R +
Sbjct: 380 TRAGIKRMRAQLPHVKVHAYFAPVTPPPAVAGSGHRLCRCCV 421
>gi|371942090|gb|AEX60857.1| internaline [Listeria monocytogenes]
Length = 790
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|148676993|gb|EDL08940.1| F-box and leucine-rich repeat protein 2, isoform CRA_a [Mus
musculus]
Length = 402
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 162/342 (47%), Gaps = 26/342 (7%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC-LKELDLSRCVK 127
+ LRG V D+ + R + LN+ C ++T S ++L+ LK LDL+ CV
Sbjct: 62 LSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVS 121
Query: 128 VTDAGMKHLL-SISTLEKLWLSETG-LTADGI-ALLSSLQNLSVLDLGGLP-VTDLVLRS 183
VT++ +K + LE L LS +T +GI AL+ + L L L G + D L+
Sbjct: 122 VTNSSLKGISEGCRNLEYLNLSWCDQITKEGIEALVRGCRGLKALLLRGCTQLEDEALKH 181
Query: 184 LQV-LTKLEYLDLWG-SQVSNRGAA-VLKMFPRLSFLNLAWTGVTKLPNIS----SLECL 236
+Q +L L+L S++++ G + + RL L L +G + L + S L C
Sbjct: 182 IQNHCHELVSLNLQSCSRITDDGVVQICRGCHRLQALCL--SGCSNLTDASLTALGLNCP 239
Query: 237 NLSFIQQVGAE--TDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTF-KELIHLSL 292
L ++ TD +L A +N + LE+++LE+ ++D+TL LS +L LSL
Sbjct: 240 RLQVLEAARCSHLTDAGFTLLA-RNCHELEKMDLEECVLITDSTLVQLSIHCPKLQALSL 298
Query: 293 RNASL-TDVSLHQLSSLS----KLTNLSIRDAVL-TNSGLGSFKPPRSLKLLDLHGGWLL 346
+ L TD + LSS + +L L + + +L T++ L + R L+ L+L+ +
Sbjct: 299 SHCELITDEGILHLSSSTCGHERLRVLELDNCLLVTDASLEHLENCRGLERLELYDCQQV 358
Query: 347 TEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSL 388
T I + P ++V + + P + +G R +
Sbjct: 359 TRAGIKRMRAQLPHVKVHAYFAPVTPPPAVAGSGHRLCRCCV 400
>gi|71912406|gb|AAZ53235.1| InlA [Listeria monocytogenes]
Length = 800
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTSLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.7 bits (104), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|371942138|gb|AEX60881.1| internaline [Listeria monocytogenes]
Length = 789
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|371942132|gb|AEX60878.1| internaline [Listeria monocytogenes]
Length = 790
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|371942084|gb|AEX60854.1| internaline [Listeria monocytogenes]
Length = 790
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|29823176|emb|CAD15503.2| probable lrr-gala family type III effector protein (gala 5)
[Ralstonia solanacearum GMI1000]
Length = 538
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 131/323 (40%), Gaps = 44/323 (13%)
Query: 34 LERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENS-VDAEWMAYLGAFRYL 92
L RLP L+R +R + I + ++ L N + E L A L
Sbjct: 166 LSRLP------LVRLNVRNKRIGAEGARLLANHPTLTSLNVSNGRIGPEGAQALAANTRL 219
Query: 93 RSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGL 152
+LNV+ R+ + AL L+ LD+S ++ D G + L + + L L + G+
Sbjct: 220 TTLNVSG-NRIGVAGAKALAANQTLRSLDVSDN-RIGDEGARELAACTQLTTLDANRNGI 277
Query: 153 TADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFP 212
DG L++ + L+ L +GG + D + +L +L L++ + V G L
Sbjct: 278 GVDGATALAASRTLTSLAIGGNEIGDAGVLALAANARLTTLNVESTGVGADGVKALAASK 337
Query: 213 RLSFL-----NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLN 267
L++L ++ G T L +SL L+L ++GAE AL L L+
Sbjct: 338 TLTWLRLDGNDIGNAGATALAASTSLTTLHLEH-SRIGAE-----GAQALAANTKLTTLD 391
Query: 268 LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLG 327
L + DA + LS L+ LS+R +L D S L++
Sbjct: 392 LGYNDIGDAGVRALSANATLVWLSVRRNNLEDASAVSLAA-------------------- 431
Query: 328 SFKPPRSLKLLDLHGGWLLTEDA 350
++L LD+ G + + A
Sbjct: 432 ----GKTLTTLDISGNGIQDQGA 450
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 104/265 (39%), Gaps = 51/265 (19%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSR----------- 124
N + L A + LRSL+V+D R+ L T L LD +R
Sbjct: 227 NRIGVAGAKALAANQTLRSLDVSD-NRIGDEGARELAACTQLTTLDANRNGIGVDGATAL 285
Query: 125 ------------CVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLG 172
++ DAG+ L + + L L + TG+ ADG+ L++ + L+ L L
Sbjct: 286 AASRTLTSLAIGGNEIGDAGVLALAANARLTTLNVESTGVGADGVKALAASKTLTWLRLD 345
Query: 173 GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISS 232
G + + +L T L L L S++ GA L +L+ L+L + +
Sbjct: 346 GNDIGNAGATALAASTSLTTLHLEHSRIGAEGAQALAANTKLTTLDLGYNDIGD------ 399
Query: 233 LECLNLSFIQQVGAETDLV-LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 291
+ ++ + A LV LS + R NLE DA+ L+ K L L
Sbjct: 400 ------AGVRALSANATLVWLS---------VRRNNLE-----DASAVSLAAGKTLTTLD 439
Query: 292 LRNASLTDVSLHQLSSLSKLTNLSI 316
+ + D L++ LT L +
Sbjct: 440 ISGNGIQDQGAKALAANPTLTTLDV 464
>gi|371942074|gb|AEX60849.1| internaline [Listeria monocytogenes]
gi|371942102|gb|AEX60863.1| internaline [Listeria monocytogenes]
gi|371942114|gb|AEX60869.1| internaline [Listeria monocytogenes]
gi|371942124|gb|AEX60874.1| internaline [Listeria monocytogenes]
Length = 790
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|410684076|ref|YP_006060083.1| leucine-rich-repeat type III effector protein (GALA1-like)
[Ralstonia solanacearum CMR15]
gi|299068565|emb|CBJ39793.1| leucine-rich-repeat type III effector protein (GALA1-like)
[Ralstonia solanacearum CMR15]
Length = 555
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 116/269 (43%), Gaps = 28/269 (10%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + ++ + L L++LN++ + + AL T L EL+ S C +++DAG +
Sbjct: 237 NEIGSDGVQALADNATLKTLNIS-SNDIGDAGALALAVNTTLTELNTS-CNRISDAGAQA 294
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
L + +L L +S+ G G+ +++ L LD+ +++ + ++ T L L +
Sbjct: 295 LANSDSLTSLDISDNGFGDAGVQAIAANTRLRRLDISRNRLSEAGVLAVAANTTLTKLCI 354
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLT 255
++ GA L RL L+ G I GA+
Sbjct: 355 ADCEIGTAGAQALAANTRLVSLDAGHNG-----------------IGTEGAQ-------- 389
Query: 256 ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLS 315
AL L++LNLE+ + DA + L L+L+ +TD L L++ + L L+
Sbjct: 390 ALARHATLKQLNLEKNPIGDAGAVAFADNATLRSLNLKGCKVTDSGLRVLATNATLRTLN 449
Query: 316 IRDAVLTNSGLGSFKPPRSLKLLDL-HGG 343
+ D +T G + +L LD+ H G
Sbjct: 450 VSDNRITAEGAKATAANSTLTSLDVSHNG 478
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 108/242 (44%), Gaps = 17/242 (7%)
Query: 117 LKELDLSRCVK-VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP 175
LK LDLSRC + +T AG+ HL + L +L + + +G LL++ L+ L++
Sbjct: 156 LKALDLSRCGRQITAAGIAHLSELP-LAELNVRNNWIGDEGARLLAAHPTLTTLNVASNG 214
Query: 176 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNI 230
+ D ++L T+LE LD+ +++ + G L L LN++ G L
Sbjct: 215 IGDAGAQALAANTRLESLDISFNEIGSDGVQALADNATLKTLNISSNDIGDAGALALAVN 274
Query: 231 SSLECLNLSF--IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELI 288
++L LN S I GA+ AL N + L L++ DA + ++ L
Sbjct: 275 TTLTELNTSCNRISDAGAQ--------ALANSDSLTSLDISDNGFGDAGVQAIAANTRLR 326
Query: 289 HLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 348
L + L++ + +++ + LT L I D + +G + L LD + TE
Sbjct: 327 RLDISRNRLSEAGVLAVAANTTLTKLCIADCEIGTAGAQALAANTRLVSLDAGHNGIGTE 386
Query: 349 DA 350
A
Sbjct: 387 GA 388
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 70/150 (46%), Gaps = 2/150 (1%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N + E L L+ LN+ + + + A L+ L+L C KVTD+G+
Sbjct: 379 GHNGIGTEGAQALARHATLKQLNL-EKNPIGDAGAVAFADNATLRSLNLKGC-KVTDSGL 436
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
+ L + +TL L +S+ +TA+G ++ L+ LD+ + D +L T L L
Sbjct: 437 RVLATNATLRTLNVSDNRITAEGAKATAANSTLTSLDVSHNGIEDEGALALAANTVLNVL 496
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTG 223
++ + ++ +G L L+ L++ G
Sbjct: 497 NICYNALTVKGVTALAASTTLAVLDIRENG 526
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 84/196 (42%), Gaps = 19/196 (9%)
Query: 6 ESELVRLCIEAACQSGESVQKWRRQRRSLERLPA-------HLADSLLRHLIRRRL---- 54
+ L +LCI A C+ G + + L L A A +L RH ++L
Sbjct: 346 NTTLTKLCI-ADCEIGTAGAQALAANTRLVSLDAGHNGIGTEGAQALARHATLKQLNLEK 404
Query: 55 --IFPSLLEVFKHNA--EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWA 110
I + F NA ++ L+G D+ + L LR+LNV+D R+T+ A
Sbjct: 405 NPIGDAGAVAFADNATLRSLNLKGCKVTDS-GLRVLATNATLRTLNVSD-NRITAEGAKA 462
Query: 111 LTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLD 170
+ L LD+S + D G L + + L L + LT G+ L++ L+VLD
Sbjct: 463 TAANSTLTSLDVSHN-GIEDEGALALAANTVLNVLNICYNALTVKGVTALAASTTLAVLD 521
Query: 171 LGGLPVTDLVLRSLQV 186
+ + + R+LQ
Sbjct: 522 IRENGYSATIERALQA 537
>gi|71051494|gb|AAH26121.1| FBXL13 protein [Homo sapiens]
gi|119603705|gb|EAW83299.1| F-box and leucine-rich repeat protein 13, isoform CRA_b [Homo
sapiens]
Length = 684
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 133/281 (47%), Gaps = 21/281 (7%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLK--ELDLSRCVKVTDAGMKHLL-SISTLEK 144
F L++L++A CRR T L L G C K LDLS C +++ G +++ S + +
Sbjct: 385 FHNLQNLSLAYCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGIMH 444
Query: 145 LWLSETGLTADGI--ALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQ-V 200
L +++ D AL+ ++ L G P ++D R+L KL + G++ V
Sbjct: 445 LTINDMPTLTDNCVKALVEKCSRITSLVFTGAPHISDCTFRALSA-CKLRKIRFEGNKRV 503
Query: 201 SNRGAAVL-KMFPRLSFLNLA-WTGVT-----KLPNISSLECLNLSFIQQVGAETDLVLS 253
++ + K +P LS + +A G+T L + L LNL+ ++G + L
Sbjct: 504 TDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIG-DMGLKQF 562
Query: 254 LTALQNLNHLERLNLEQ-TQVSDATLFPLST-FKELIHLSLRNAS-LTDVSLHQLSSLSK 310
L ++ + LNL ++SDA++ LS L +LSLRN LT + + ++
Sbjct: 563 LDGPASM-RIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNIFS 621
Query: 311 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 351
L ++ + ++N GL + LK L + + +T+D I
Sbjct: 622 LVSIDLSGTDISNEGLNVLSRHKKLKELSVSECYRITDDGI 662
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 120/256 (46%), Gaps = 48/256 (18%)
Query: 117 LKELDLSRCVKVTDAGMKHLL-SISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 171
L+EL++S C TD M+H+ + L LS T +T + LL +LQNLS+
Sbjct: 337 LQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQNLSLAYC 396
Query: 172 GGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWTGVTKL 227
TD L+ L + KL YLDL G +Q+S +G ++ + TG+ L
Sbjct: 397 RRF--TDKGLQYLNLGNGCHKLIYLDLSGCTQISVQG---------FRYIANSCTGIMHL 445
Query: 228 -----PNISSLECLNLSFIQQVGAETDLVLS------------LTALQNLNHLERLNLE- 269
P ++ C+ + +++ T LV + L+A + L ++ E
Sbjct: 446 TINDMPTLTD-NCVK-ALVEKCSRITSLVFTGAPHISDCTFRALSACK----LRKIRFEG 499
Query: 270 QTQVSDATL-FPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGL 326
+V+DA+ F + L H+ + + +TD SL LS L +LT L++ + V + + GL
Sbjct: 500 NKRVTDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGL 559
Query: 327 GSF-KPPRSLKLLDLH 341
F P S+++ +L+
Sbjct: 560 KQFLDGPASMRIRELN 575
>gi|219821357|gb|ACL37816.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 103 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 158
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL + ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 159 NKVS--DISVLAKLTNLESIIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 212
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 213 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 267
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 268 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 305
>gi|423654209|ref|ZP_17629508.1| hypothetical protein IKG_01197 [Bacillus cereus VD200]
gi|401296676|gb|EJS02293.1| hypothetical protein IKG_01197 [Bacillus cereus VD200]
Length = 760
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 116/239 (48%), Gaps = 37/239 (15%)
Query: 88 AFRY---LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEK 144
A +Y L+SL VA+ + + + +A LK+L+ A + L+ + LE
Sbjct: 237 ALKYMPNLKSLTVANAK-IKDPSFFA-----NLKQLNHLALRGNEFADVTPLVKMDNLES 290
Query: 145 LWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG 204
L LS +T +A L+ ++N+ L L G + D+ +L + +L+YL+L +++ N
Sbjct: 291 LDLSNNKIT--NVAPLTEMKNVKSLYLSGNQIEDVT--ALAKMEQLDYLNLANNKIKN-- 344
Query: 205 AAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLS------LTALQ 258
A L +++L LA ++ +I +L L L TDLVL+ L+ ++
Sbjct: 345 VAPLSALKNVTYLTLAGN---QIEDIKALYSLPL---------TDLVLTRNKVKDLSGIE 392
Query: 259 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 317
+ LE L + + ++ D T PLS +L L L N L D++L LSSL L L +
Sbjct: 393 QMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDITL--LSSLVNLQKLDLE 447
>gi|386042598|ref|YP_005961403.1| internalin E [Listeria monocytogenes 10403S]
gi|404409495|ref|YP_006695083.1| internalin E [Listeria monocytogenes SLCC5850]
gi|2347106|gb|AAB67971.1| inlE [Listeria monocytogenes]
gi|345535832|gb|AEO05272.1| internalin E [Listeria monocytogenes 10403S]
gi|404229321|emb|CBY50725.1| internalin E (LPXTG motif) [Listeria monocytogenes SLCC5850]
Length = 499
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 107/229 (46%), Gaps = 21/229 (9%)
Query: 156 GIALLSSLQ---NLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMF 211
GI + LQ NLS L+L VTDL L+ LTK+ L L G+ + + A A LK
Sbjct: 85 GITTIEGLQYLTNLSELELIDNQVTDL--NPLKNLTKITELRLSGNPLKDVSALAGLKNL 142
Query: 212 PRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 271
+ + T VT L +S+L+ LNL Q + +T L L++L+ L+ T
Sbjct: 143 KTMDLIYTDITDVTPLAGLSNLQVLNLDINQ--------ITDITPLAGLSNLQFLSFGST 194
Query: 272 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP 331
QVSD T PL+ +L L+ N+ ++DVS L+ LS LT + + + + S +
Sbjct: 195 QVSDLT--PLANLSKLTTLNAMNSKVSDVS--PLTGLSNLTEVYLEENQI--SDVSPLAK 248
Query: 332 PRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNG 380
+L ++ L + + Q + P + +I P D I NG
Sbjct: 249 LPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAP-DTISDNG 296
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 22/197 (11%)
Query: 106 SALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQN 165
+ + L +T L EL+L +VTD + L +++ + +L LS G ++ L+ L+N
Sbjct: 87 TTIEGLQYLTNLSELELIDN-QVTD--LNPLKNLTKITELRLS--GNPLKDVSALAGLKN 141
Query: 166 LSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV- 224
L +DL +TD+ L L+ L+ L+L +Q+++ L L FL+ T V
Sbjct: 142 LKTMDLIYTDITDVT--PLAGLSNLQVLNLDINQITD--ITPLAGLSNLQFLSFGSTQVS 197
Query: 225 --TKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 282
T L N+S L LN A V ++ L L++L + LE+ Q+SD + PL+
Sbjct: 198 DLTPLANLSKLTTLN--------AMNSKVSDVSPLTGLSNLTEVYLEENQISDVS--PLA 247
Query: 283 TFKELIHLSLRNASLTD 299
L ++L N ++T+
Sbjct: 248 KLPNLSIVTLTNQTITN 264
>gi|195029827|ref|XP_001987773.1| GH22100 [Drosophila grimshawi]
gi|193903773|gb|EDW02640.1| GH22100 [Drosophila grimshawi]
Length = 550
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 97/184 (52%), Gaps = 14/184 (7%)
Query: 92 LRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET 150
L L + DC+R++ AL + G+T LK ++LS CV VTD+G+KHL + LE+L L
Sbjct: 360 LEFLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDSGLKHLARMPKLEQLNLRSC 419
Query: 151 GLTAD-GIALLS-SLQNLSVLDLGGL-PVTDLVLRSL-QVLTKLEYLDLWGSQVSNRGA- 205
+D G+A L+ ++ LD+ ++D L + Q L +L L L ++++G
Sbjct: 420 DNISDIGMAYLTEGGSGINCLDVSFCDKISDQALTHIAQGLFRLRSLSLNQCHITDQGML 479
Query: 206 AVLKMFPRLSFLNLAWT------GVTKLP-NISSLECLNLSFIQQVGAE-TDLVLSLTAL 257
+ K L LN+ G+ L ++S+L+ ++L Q+ ++ D+++ L L
Sbjct: 480 KIAKSLHELENLNIGQCSRITDKGLQTLAEDLSNLKTIDLYGCTQLSSKGIDIIMKLPKL 539
Query: 258 QNLN 261
Q LN
Sbjct: 540 QKLN 543
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 124/280 (44%), Gaps = 50/280 (17%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSIS------- 140
+ L +L + C +T++ L + G+ L+ L+L C ++D G+ HL S
Sbjct: 298 LKNLETLELGGCCNITNTGLLLIAWGLKKLRHLNLRSCWHISDQGIGHLAGFSRETAEGN 357
Query: 141 -TLEKLWLSET--------GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLE 191
LE L L + G A G+ L S+ NLS + VTD L+ L + KLE
Sbjct: 358 LQLEFLGLQDCQRLSDEALGHIAQGLTSLKSI-NLSFC----VSVTDSGLKHLARMPKLE 412
Query: 192 YLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDL 250
L+L +S+ G A L S + CL++SF ++ +D
Sbjct: 413 QLNLRSCDNISDIGMAYLT------------------EGGSGINCLDVSFCDKI---SDQ 451
Query: 251 VLSLTALQNLNHLERLNLEQTQVSDATLFPLS-TFKELIHLSLRNAS-LTDVSLHQLS-S 307
L+ A Q L L L+L Q ++D + ++ + EL +L++ S +TD L L+
Sbjct: 452 ALTHIA-QGLFRLRSLSLNQCHITDQGMLKIAKSLHELENLNIGQCSRITDKGLQTLAED 510
Query: 308 LSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLL 346
LS L + + L++ G+ L+ L+L G WL+
Sbjct: 511 LSNLKTIDLYGCTQLSSKGIDIIMKLPKLQKLNL-GLWLV 549
>gi|254828724|ref|ZP_05233411.1| inlE [Listeria monocytogenes FSL N3-165]
gi|258601129|gb|EEW14454.1| inlE [Listeria monocytogenes FSL N3-165]
Length = 499
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 107/229 (46%), Gaps = 21/229 (9%)
Query: 156 GIALLSSLQ---NLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMF 211
GI + LQ NLS L+L VTDL L+ LTK+ L L G+ + + A A LK
Sbjct: 85 GITTIEGLQYLTNLSELELIDNQVTDL--NPLKNLTKITELRLSGNPLKDVSALAGLKNL 142
Query: 212 PRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 271
+ + T VT L +S+L+ LNL Q + +T L L++L+ L+ T
Sbjct: 143 KTMDLIYTDITDVTPLAGLSNLQVLNLDINQ--------ITDITPLAGLSNLQFLSFGST 194
Query: 272 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP 331
QVSD T PL+ +L L+ N+ ++DVS L+ LS LT + + + + S +
Sbjct: 195 QVSDLT--PLANLSKLTTLNAMNSKVSDVS--PLTGLSNLTEVYLEENQI--SDVSPLAK 248
Query: 332 PRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNG 380
+L ++ L + + Q + P + +I P D I NG
Sbjct: 249 LPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAP-DTISDNG 296
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 22/197 (11%)
Query: 106 SALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQN 165
+ + L +T L EL+L +VTD + L +++ + +L LS G ++ L+ L+N
Sbjct: 87 TTIEGLQYLTNLSELELIDN-QVTD--LNPLKNLTKITELRLS--GNPLKDVSALAGLKN 141
Query: 166 LSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV- 224
L +DL +TD+ L L+ L+ L+L +Q+++ L L FL+ T V
Sbjct: 142 LKTMDLIYTDITDVT--PLAGLSNLQVLNLDINQITD--ITPLAGLSNLQFLSFGSTQVS 197
Query: 225 --TKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 282
T L N+S L LN A V ++ L L++L + LE+ Q+SD + PL+
Sbjct: 198 DLTPLANLSKLTTLN--------AMNSKVSDVSPLTGLSNLTEVYLEENQISDVS--PLA 247
Query: 283 TFKELIHLSLRNASLTD 299
L ++L N ++T+
Sbjct: 248 KLPNLSIVTLTNQTITN 264
>gi|443688071|gb|ELT90873.1| hypothetical protein CAPTEDRAFT_165456 [Capitella teleta]
Length = 642
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 109/236 (46%), Gaps = 33/236 (13%)
Query: 83 MAYLG-AFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIST 141
Y+G + LR L + DC R+T L L+ L ++L+ CV++TD G+++L+ S
Sbjct: 361 FKYIGKSCHELRHLYLVDCHRITDLTLKVLSQCRNLTVVNLADCVRITDTGVRYLVESSC 420
Query: 142 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL-WGSQV 200
K L E LT + + +G + + ++ R L YL L + +
Sbjct: 421 GNK--LQELNLT-------------NCIRVGDIALVNIHKRC----HNLTYLHLCFCEHI 461
Query: 201 SNRGAAVLKMFPRLSFL-----NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLT 255
S G +L L+ L N G++ L N L+ +NLS + A TDL L
Sbjct: 462 SEAGIELLGQTHSLTALDISGCNCGDAGLSSLGNNIRLKDVNLS---ECSAITDLGLQKF 518
Query: 256 ALQNLNHLERLNLEQTQ-VSDATLFPLS-TFKELIHLSLRNAS-LTDVSLHQLSSL 308
A Q +ERL+L Q ++D + L+ + L HLSL LTD+S+ LS +
Sbjct: 519 A-QQCTEIERLDLSHCQMITDGAIKNLAFCCRMLTHLSLAGCKLLTDLSVQYLSGV 573
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 120/260 (46%), Gaps = 34/260 (13%)
Query: 91 YLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL-SISTLEKLWLSE 149
YL LN+ C R+TS +++ L++L+LS C + D +K +L + L +S
Sbjct: 163 YLVHLNLRRCERITSLTFYSIRECRNLQDLNLSECPALDDDSLKMVLEGCKIIIYLNISH 222
Query: 150 TGLTADGIALLSSLQ-NLSVLDLG-GLPVTDLVLRSL---QVLTKLEYLDLWG-SQVSNR 203
+ +T + +S NL L L L +D L+ L + +L +LD+ G SQV+
Sbjct: 223 SLITDASLRSISKYCLNLQYLSLAFCLRYSDKGLQYLANGESAKRLNHLDISGCSQVTPN 282
Query: 204 GAAVLK----------MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLS 253
G A L + SF + +T C NL I +G+ LS
Sbjct: 283 GLAKLSEGCSDVQTLLLNDIESFDDACLEAITD-------NCKNLRNISFLGSHN---LS 332
Query: 254 LTALQNLNHLERLNL----EQTQVSDATL-FPLSTFKELIHLSLRNAS-LTDVSLHQLSS 307
AL+N+ ++L + +++D T + + EL HL L + +TD++L LS
Sbjct: 333 DNALKNVATSKKLQMLKIDSNCKITDITFKYIGKSCHELRHLYLVDCHRITDLTLKVLSQ 392
Query: 308 LSKLTNLSIRDAV-LTNSGL 326
LT +++ D V +T++G+
Sbjct: 393 CRNLTVVNLADCVRITDTGV 412
>gi|290979019|ref|XP_002672232.1| predicted protein [Naegleria gruberi]
gi|284085807|gb|EFC39488.1| predicted protein [Naegleria gruberi]
Length = 426
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/282 (18%), Positives = 109/282 (38%), Gaps = 53/282 (18%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + E Y+G + L+ L++A+ + G KH
Sbjct: 91 NYIGVEGAKYIGEMKQLKQLHIANNN--------------------------IGPEGAKH 124
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ + L L + +T DG +S ++ L+VL++ G + D + + + +L LD+
Sbjct: 125 ISGLEQLTILNIRANEITVDGAKFISEMKQLTVLNIIGNDICDEGAKFISGMKQLTNLDI 184
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLT 255
+ + GA + ++ LN+ + + +EC
Sbjct: 185 SVNNIGENGAKYVSEMLNITKLNIGFNSIN-----DCVECFG------------------ 221
Query: 256 ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLS 315
+ L LN+ + + + +S+F +L HLS+ + S+++ +S + + L
Sbjct: 222 ---KMKQLTDLNVNSSCIGLCGIVFISSFNQLTHLSIASNSISNYEASHISQMKNVIKLD 278
Query: 316 IRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKM 357
I D + ++G+ S L L++ +T I CKM
Sbjct: 279 ISDNRIGDNGVQSISEMNQLTELNV-SSIDITPIGIQYICKM 319
>gi|223698952|gb|ACN19208.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 76 KNLTNLNRLELSSNTISDISALSGLTNLQQLFFGN--QVTD--LKPLANLTTLERLDISS 131
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 132 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 185
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 186 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 240
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 241 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 278
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 85/168 (50%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +L
Sbjct: 50 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLF 107
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 108 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 158
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 159 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 202
>gi|83629899|gb|ABC26611.1| internalin E [Listeria monocytogenes]
gi|83629915|gb|ABC26619.1| internalin E [Listeria monocytogenes]
Length = 498
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 107/229 (46%), Gaps = 21/229 (9%)
Query: 156 GIALLSSLQ---NLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMF 211
GI + LQ NLS L+L VTDL L+ LTK+ L L G+ + + A A LK
Sbjct: 84 GITTIEGLQYLTNLSELELIDNQVTDL--NPLKNLTKITELRLSGNPLKDVSALAGLKNL 141
Query: 212 PRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 271
+ + T VT L +S+L+ LNL Q + +T L L++L+ L+ T
Sbjct: 142 KTMDLIYTDITDVTPLAGLSNLQVLNLDINQ--------ITDITPLAGLSNLQFLSFGST 193
Query: 272 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP 331
QVSD T PL+ +L L+ N+ ++DVS L+ LS LT + + + + S +
Sbjct: 194 QVSDLT--PLANLSKLTTLNAMNSKVSDVS--PLTGLSNLTEVYLEENQI--SDVSPLAK 247
Query: 332 PRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNG 380
+L ++ L + + Q + P + +I P D I NG
Sbjct: 248 LPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAP-DTISDNG 295
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 22/197 (11%)
Query: 106 SALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQN 165
+ + L +T L EL+L +VTD + L +++ + +L LS G ++ L+ L+N
Sbjct: 86 TTIEGLQYLTNLSELELIDN-QVTD--LNPLKNLTKITELRLS--GNPLKDVSALAGLKN 140
Query: 166 LSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV- 224
L +DL +TD+ L L+ L+ L+L +Q+++ L L FL+ T V
Sbjct: 141 LKTMDLIYTDITDVT--PLAGLSNLQVLNLDINQITD--ITPLAGLSNLQFLSFGSTQVS 196
Query: 225 --TKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 282
T L N+S L LN A V ++ L L++L + LE+ Q+SD + PL+
Sbjct: 197 DLTPLANLSKLTTLN--------AMNSKVSDVSPLTGLSNLTEVYLEENQISDVS--PLA 246
Query: 283 TFKELIHLSLRNASLTD 299
L ++L N ++T+
Sbjct: 247 KLPNLSIVTLTNQTITN 263
>gi|290991518|ref|XP_002678382.1| predicted protein [Naegleria gruberi]
gi|284091994|gb|EFC45638.1| predicted protein [Naegleria gruberi]
Length = 344
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 109/231 (47%), Gaps = 17/231 (7%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
+TS T + L +LD+ ++ D GMK + + L KL + + +GI LS+
Sbjct: 14 ITSKGAEYFTNLKQLIKLDIGG-TEIGDEGMKSIGKMKQLTKLEMCGNKIGDEGIKALSN 72
Query: 163 LQN-LSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL---- 217
L + L+ L + + ++L+ LT+L YLD+ +++ N+GA + P+L+ L
Sbjct: 73 LNSSLTHLCVRKNNIGQEGAKTLKHLTRLNYLDIRKNKLGNQGAKEISELPQLTRLFICK 132
Query: 218 -NLAWTGVTKLPNISSLECLNLSF--IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVS 274
N+ G + I +L L +S I GA ++ L HL+ L ++ T V
Sbjct: 133 NNIGDEGAKAIGEIQTLTQLVMSENPIGDGGA--------ISVSQLRHLKTLCIQWTNVR 184
Query: 275 DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 325
+ + K+L L +++ L + + L++LT L I D + +SG
Sbjct: 185 TEGIKAICNMKQLTCLHIQSNKLGFDDIKPIGQLNQLTRLLISDNQIGDSG 235
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 91/206 (44%), Gaps = 25/206 (12%)
Query: 152 LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF 211
+T+ G ++L+ L LD+GG + D ++S+ + +L L++ G+++ + G
Sbjct: 14 ITSKGAEYFTNLKQLIKLDIGGTEIGDEGMKSIGKMKQLTKLEMCGNKIGDEG------I 67
Query: 212 PRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 271
LS LN + T + C+ + I Q GA+T L++L L L++ +
Sbjct: 68 KALSNLNSSLTHL----------CVRKNNIGQEGAKT--------LKHLTRLNYLDIRKN 109
Query: 272 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP 331
++ + +S +L L + ++ D + + LT L + + + + G S
Sbjct: 110 KLGNQGAKEISELPQLTRLFICKNNIGDEGAKAIGEIQTLTQLVMSENPIGDGGAISVSQ 169
Query: 332 PRSLKLLDLHGGWLLTEDAILQFCKM 357
R LK L + + TE I C M
Sbjct: 170 LRHLKTLCIQWTNVRTE-GIKAICNM 194
>gi|119603712|gb|EAW83306.1| F-box and leucine-rich repeat protein 13, isoform CRA_i [Homo
sapiens]
Length = 690
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 133/281 (47%), Gaps = 21/281 (7%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLK--ELDLSRCVKVTDAGMKHLL-SISTLEK 144
F L++L++A CRR T L L G C K LDLS C +++ G +++ S + +
Sbjct: 295 FHNLQNLSLAYCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGIMH 354
Query: 145 LWLSETGLTADGI--ALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQ-V 200
L +++ D AL+ ++ L G P ++D R+L KL + G++ V
Sbjct: 355 LTINDMPTLTDNCVKALVEKCSRITSLVFTGAPHISDCTFRALSA-CKLRKIRFEGNKRV 413
Query: 201 SNRGAAVL-KMFPRLSFLNLA-WTGVT-----KLPNISSLECLNLSFIQQVGAETDLVLS 253
++ + K +P LS + +A G+T L + L LNL+ ++G + L
Sbjct: 414 TDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIG-DMGLKQF 472
Query: 254 LTALQNLNHLERLNLEQ-TQVSDATLFPLST-FKELIHLSLRNAS-LTDVSLHQLSSLSK 310
L ++ + LNL ++SDA++ LS L +LSLRN LT + + ++
Sbjct: 473 LDGPASM-RIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNIFS 531
Query: 311 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 351
L ++ + ++N GL + LK L + + +T+D I
Sbjct: 532 LVSIDLSGTDISNEGLNVLSRHKKLKELSVSECYRITDDGI 572
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 120/256 (46%), Gaps = 48/256 (18%)
Query: 117 LKELDLSRCVKVTDAGMKHLL-SISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 171
L+EL++S C TD M+H+ + L LS T +T + LL +LQNLS+
Sbjct: 247 LQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQNLSLAYC 306
Query: 172 GGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWTGVTKL 227
TD L+ L + KL YLDL G +Q+S +G ++ + TG+ L
Sbjct: 307 RRF--TDKGLQYLNLGNGCHKLIYLDLSGCTQISVQG---------FRYIANSCTGIMHL 355
Query: 228 -----PNISSLECLNLSFIQQVGAETDLVLS------------LTALQNLNHLERLNLE- 269
P ++ C+ + +++ T LV + L+A + L ++ E
Sbjct: 356 TINDMPTLTD-NCVK-ALVEKCSRITSLVFTGAPHISDCTFRALSACK----LRKIRFEG 409
Query: 270 QTQVSDATL-FPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGL 326
+V+DA+ F + L H+ + + +TD SL LS L +LT L++ + V + + GL
Sbjct: 410 NKRVTDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGL 469
Query: 327 GSF-KPPRSLKLLDLH 341
F P S+++ +L+
Sbjct: 470 KQFLDGPASMRIRELN 485
>gi|83629953|gb|ABC26638.1| internalin E [Listeria monocytogenes]
gi|83629959|gb|ABC26641.1| internalin E [Listeria monocytogenes]
gi|83629965|gb|ABC26644.1| internalin E [Listeria monocytogenes]
gi|83629967|gb|ABC26645.1| internalin E [Listeria monocytogenes]
Length = 498
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 107/229 (46%), Gaps = 21/229 (9%)
Query: 156 GIALLSSLQ---NLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMF 211
GI + LQ NLS L+L VTDL L+ LTK+ L L G+ + + A A LK
Sbjct: 84 GITTIEGLQYLTNLSELELIDNQVTDL--NPLKNLTKITELRLSGNPLKDVSALAGLKNL 141
Query: 212 PRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 271
+ + T VT L +S+L+ LNL Q + +T L L++L+ L+ T
Sbjct: 142 KTMDLIYTDITDVTPLAGLSNLQVLNLDINQ--------ITDITPLAGLSNLQFLSFGST 193
Query: 272 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP 331
QVSD T PL+ +L L+ N+ ++DVS L+ LS LT + + + + S +
Sbjct: 194 QVSDLT--PLANLSKLTTLNAMNSKVSDVS--PLTGLSNLTEVYLEENQI--SDVSPLAK 247
Query: 332 PRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNG 380
+L ++ L + + Q + P + +I P D I NG
Sbjct: 248 LPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAP-DTISDNG 295
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 22/197 (11%)
Query: 106 SALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQN 165
+ + L +T L EL+L +VTD + L +++ + +L LS G ++ L+ L+N
Sbjct: 86 TTIEGLQYLTNLSELELIDN-QVTD--LNPLKNLTKITELRLS--GNPLKDVSALAGLKN 140
Query: 166 LSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV- 224
L +DL +TD+ L L+ L+ L+L +Q+++ L L FL+ T V
Sbjct: 141 LKTMDLIYTDITDVT--PLAGLSNLQVLNLDINQITD--ITPLAGLSNLQFLSFGSTQVS 196
Query: 225 --TKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 282
T L N+S L LN A V ++ L L++L + LE+ Q+SD + PL+
Sbjct: 197 DLTPLANLSKLTTLN--------AMNSKVSDVSPLTGLSNLTEVYLEENQISDVS--PLA 246
Query: 283 TFKELIHLSLRNASLTD 299
L ++L N ++T+
Sbjct: 247 KLPNLSIVTLTNQTITN 263
>gi|332238075|ref|XP_003268228.1| PREDICTED: F-box/LRR-repeat protein 13 isoform 2 [Nomascus
leucogenys]
Length = 690
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 133/281 (47%), Gaps = 21/281 (7%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLK--ELDLSRCVKVTDAGMKHLL-SISTLEK 144
F L++L++A CRR T L L G C K LDLS C +++ G +++ S + +
Sbjct: 295 FHNLQNLSLAYCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGIMH 354
Query: 145 LWLSETGLTADGI--ALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQ-V 200
L +++ D AL+ ++ L G P ++D ++L KL + G++ V
Sbjct: 355 LTINDMPTLTDNCVKALVEKCSRITSLVFTGAPHISDCTFKALST-CKLRKIRFEGNRRV 413
Query: 201 SNRGAAVL-KMFPRLSFLNLA-WTGVTK-----LPNISSLECLNLSFIQQVGAETDLVLS 253
++ + K +P LS + +A G+T L + L LNL+ ++G + L
Sbjct: 414 TDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIG-DMGLKQF 472
Query: 254 LTALQNLNHLERLNLEQ-TQVSDATLFPLST-FKELIHLSLRNAS-LTDVSLHQLSSLSK 310
L ++ + LNL Q+SDA++ LS L +LSLRN LT + + ++
Sbjct: 473 LDGPASI-RIRELNLSNCVQLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNIFS 531
Query: 311 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 351
L ++ + ++N GL + LK L + + +T+D I
Sbjct: 532 LVSIDLSGTDISNEGLNVLSRHKKLKELSVSECYRITDDGI 572
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 120/254 (47%), Gaps = 44/254 (17%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLW--LSETGLTADGIALL----SSLQNLSVLD 170
L+EL++S C TD M+H +S L L+ LS T +T + LL +LQNLS+
Sbjct: 247 LQELNVSDCPTFTDESMRH-ISEGCLGVLYLNLSNTTITNRTMRLLPRHFHNLQNLSLAY 305
Query: 171 LGGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWTGVTK 226
TD L+ L + KL YLDL G +Q+S +G ++ + TG+
Sbjct: 306 CRRF--TDKGLQYLNLGNGCHKLIYLDLSGCTQISVQG---------FRYIANSCTGIMH 354
Query: 227 L-----PNISSLECLNLSFIQQVGAETDLVL---------SLTALQNLNHLERLNLE-QT 271
L P ++ C+ + +++ T LV + AL L ++ E
Sbjct: 355 LTINDMPTLTD-NCVK-ALVEKCSRITSLVFTGAPHISDCTFKALSTCK-LRKIRFEGNR 411
Query: 272 QVSDATL-FPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGS 328
+V+DA+ F + L H+ + + +TD SL LS L +LT L++ + V + + GL
Sbjct: 412 RVTDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGLKQ 471
Query: 329 F-KPPRSLKLLDLH 341
F P S+++ +L+
Sbjct: 472 FLDGPASIRIRELN 485
>gi|161333854|ref|NP_001104508.1| F-box/LRR-repeat protein 13 isoform 2 [Homo sapiens]
Length = 690
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 133/281 (47%), Gaps = 21/281 (7%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLK--ELDLSRCVKVTDAGMKHLL-SISTLEK 144
F L++L++A CRR T L L G C K LDLS C +++ G +++ S + +
Sbjct: 295 FHNLQNLSLAYCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGIMH 354
Query: 145 LWLSETGLTADGI--ALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQ-V 200
L +++ D AL+ ++ L G P ++D R+L KL + G++ V
Sbjct: 355 LTINDMPTLTDNCVKALVEKCSRITSLVFTGAPHISDCTFRALSA-CKLRKIRFEGNKRV 413
Query: 201 SNRGAAVL-KMFPRLSFLNLA-WTGVT-----KLPNISSLECLNLSFIQQVGAETDLVLS 253
++ + K +P LS + +A G+T L + L LNL+ ++G + L
Sbjct: 414 TDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIG-DMGLKQF 472
Query: 254 LTALQNLNHLERLNLEQ-TQVSDATLFPLST-FKELIHLSLRNAS-LTDVSLHQLSSLSK 310
L ++ + LNL ++SDA++ LS L +LSLRN LT + + ++
Sbjct: 473 LDGPASM-RIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNIFS 531
Query: 311 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 351
L ++ + ++N GL + LK L + + +T+D I
Sbjct: 532 LVSIDLSGTDISNEGLNVLSRHKKLKELSVSECYRITDDGI 572
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 120/256 (46%), Gaps = 48/256 (18%)
Query: 117 LKELDLSRCVKVTDAGMKHLL-SISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 171
L+EL++S C TD M+H+ + L LS T +T + LL +LQNLS+
Sbjct: 247 LQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQNLSLAYC 306
Query: 172 GGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWTGVTKL 227
TD L+ L + KL YLDL G +Q+S +G ++ + TG+ L
Sbjct: 307 RRF--TDKGLQYLNLGNGCHKLIYLDLSGCTQISVQG---------FRYIANSCTGIMHL 355
Query: 228 -----PNISSLECLNLSFIQQVGAETDLVLS------------LTALQNLNHLERLNLE- 269
P ++ C+ + +++ T LV + L+A + L ++ E
Sbjct: 356 TINDMPTLTD-NCVK-ALVEKCSRITSLVFTGAPHISDCTFRALSACK----LRKIRFEG 409
Query: 270 QTQVSDATL-FPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGL 326
+V+DA+ F + L H+ + + +TD SL LS L +LT L++ + V + + GL
Sbjct: 410 NKRVTDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGL 469
Query: 327 GSF-KPPRSLKLLDLH 341
F P S+++ +L+
Sbjct: 470 KQFLDGPASMRIRELN 485
>gi|85679234|gb|ABC72033.1| InlA [Listeria monocytogenes]
Length = 794
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 118/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 215
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 269
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 270 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 324
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +S+L+KL
Sbjct: 325 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSNLTKL 362
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 134 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 191
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 192 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 242
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 243 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 286
>gi|440804643|gb|ELR25520.1| leucine rich repeat domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 444
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 177/377 (46%), Gaps = 49/377 (12%)
Query: 37 LPAHLADSLLRHL-IRRRLIFPSLLEVFKHNAEAI------ELRGENSVDAEWMAYLGAF 89
+PA L +L+ + +RR+ P+ + F ++ + + R N E MA
Sbjct: 29 MPAELKHKILQSVCLRRKNFTPAEFQFFIEPSDHLTSLDLSQCRTLNENHFELMA--TKL 86
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTC--LKELDLSRCVKVTDAGMKHLLSI--STLEKL 145
R L SLNVA C VT L +T +C +++L LS C KVTD+G+ + + + L +L
Sbjct: 87 RQLVSLNVAGCVSVTYDVLQRITE-SCPHIRQLTLSGCPKVTDSGVALVATTYHTNLTRL 145
Query: 146 WLSET-GLTADGIALLS-SLQNLSVLDLGGLPV-----TDLVLRSLQVLTKLEYLDL--- 195
L+E +T + +A LS N+ L LG T+++ R+L K+ Y+ L
Sbjct: 146 ELNECFEVTDNSLASLSEQCTNIKALHLGYCQYITDKGTEMLCRALPTNPKMSYIHLEEI 205
Query: 196 ---WGSQVSNRGAAVLKMF-PRLSFLNLAWTGVTK------LPNISSLECLNLSFIQQVG 245
+ ++++++ L F L +L+++ +T + L LN +++
Sbjct: 206 TLDYCTELTDKAIQQLVSFNSTLRYLSMSGCKITDNAIRYVAGYCARLVTLN---VKECD 262
Query: 246 AETDLVLSLTALQNLNHLERLNLE-QTQVSDATLFPLSTFK-ELIHLSL-RNASLTDVSL 302
TD +++ A Q LE + + +DA+ L+ + +L LSL R+A++T+ SL
Sbjct: 263 MLTDYTITVIA-QRCKGLEAFDGSCGGRYTDASAQQLALYSHQLKSLSLARSAAITNASL 321
Query: 303 HQLS-SLSKLTNLSIRDAVLTNSGLGSF-KPPRSLKLLDLHGGWLLTEDAI---LQFCKM 357
++ S++ +L+I +++ GL R+LK LD+ LT D I L C
Sbjct: 322 GSIALGCSRIESLNINGTQVSDEGLKQLVTSCRNLKQLDVSFCKRLTVDGIRLLLTNCPS 381
Query: 358 HPRIEVWHELSVICPSD 374
++ +W + P D
Sbjct: 382 LQKLAMW---GITVPDD 395
>gi|384245058|gb|EIE18554.1| L domain-like protein [Coccomyxa subellipsoidea C-169]
Length = 731
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 152/327 (46%), Gaps = 46/327 (14%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N ++ L G V E + +L L SLN+++C +VT L AL + L L+LS C
Sbjct: 120 NLTSVVLAGCEDVTDEGLLHLSHLSRLASLNLSNCCKVTDGGLLALAALRQLGSLNLSGC 179
Query: 126 VKVTDAGMKHLLS----ISTLEKLWLSETGLTADG-IALLSSLQNLSVLDL-GGLPVTDL 179
V +++ G+ + + + TL+ S +D +A ++ L +L+ LDL G +TD
Sbjct: 180 VSLSERGLAAIAARLRRLHTLKLGGTSRVATISDASVAAIAGLTSLTHLDLSGSHDITDA 239
Query: 180 VLRSLQVLTKLEYLDLWGS-QVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNL 238
L L L++L L LW +VS G AV + P ++ L+L G +L S C ++
Sbjct: 240 GLLHLGSLSRLRTLVLWNCMRVSVDGLAVFRQLPAVADLSL--RGCAQL---SDALCGSV 294
Query: 239 SFIQQV------------GAETDLVLSLTALQNLN-------------------HLERLN 267
+ ++Q+ GAE L+ LQ LN L +N
Sbjct: 295 AHLEQLTRLDLRACERFTGAELREWKGLSLLQELNLKGCYKIEDAGLQGLSLLTSLTSIN 354
Query: 268 LEQT-QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA-VLTNSG 325
+++ Q++ L LS ++ ++L+ SL L+SLS+L L++R+ L +S
Sbjct: 355 MQECWQITAQGLAALSGLSRMMDVNLQGCRKIS-SLEPLASLSRLAALNLRNCDGLGDSS 413
Query: 326 LGSFKPPRSLKLLDLHGGWLLTEDAIL 352
LG SL+ LDL G LT +L
Sbjct: 414 LGPLSRLVSLRSLDLSGCTHLTGRGLL 440
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 133/293 (45%), Gaps = 36/293 (12%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN+ +C + S+L L+ + L+ LDLS C +T G+ L S++ L L
Sbjct: 392 LASLSRLAALNLRNCDGLGDSSLGPLSRLVSLRSLDLSGCTHLTGRGLLPLSSLTGLTAL 451
Query: 146 WLSE-TGL--TADGIALLSSLQNLSVLDLGGLPVTDLV-LRSLQVLTKLEYLDLWGSQVS 201
L G+ +AD +A LS L LS L+L G + + SL LT L L L G
Sbjct: 452 KLQHCAGIRRSAD-LAPLSLLTALSTLNLSGCSQEEGAGISSLATLTCLRALSLDG---- 506
Query: 202 NRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLN 261
+ ++F++ +T L ++SL + + VG L A+ ++
Sbjct: 507 ---------WRHVTFIDDGLMALTSLRGVASLNLQGCTSLTDVG--------LAAIGHMT 549
Query: 262 HLERLNLEQT-QVSDATLFPLSTFKELIHLSLRNASL-TDVSLHQLSSLSKLTNLSIRDA 319
L +NL+ Q++ + L LSL+NAS+ +D ++ ++ L L++++
Sbjct: 550 SLTNVNLQDCRQITGEGFAGWAGMAHLTSLSLQNASMVSDAGCCAIARITSLRTLNLKNC 609
Query: 320 -VLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIE------VWH 365
LT+ L + P L L L G L+ DA L C P ++ WH
Sbjct: 610 PALTDDCLAALTPLERLCHLRLQGNQQLS-DAALAHCARMPSLQHLETSNCWH 661
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 2/128 (1%)
Query: 69 AIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV 128
++ L+G S+ +A +G L ++N+ DCR++T GM L L L V
Sbjct: 528 SLNLQGCTSLTDVGLAAIGHMTSLTNVNLQDCRQITGEGFAGWAGMAHLTSLSLQNASMV 587
Query: 129 TDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDL-GGLPVTDLVLRSLQV 186
+DAG + I++L L L LT D +A L+ L+ L L L G ++D L
Sbjct: 588 SDAGCCAIARITSLRTLNLKNCPALTDDCLAALTPLERLCHLRLQGNQQLSDAALAHCAR 647
Query: 187 LTKLEYLD 194
+ L++L+
Sbjct: 648 MPSLQHLE 655
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 113/266 (42%), Gaps = 51/266 (19%)
Query: 96 NVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTAD 155
N++ C + + + +L +TCL+ L L G +H+ I D
Sbjct: 478 NLSGCSQEEGAGISSLATLTCLRALSLD--------GWRHVTFID--------------D 515
Query: 156 GIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGS-QVSNRGAAVLKMFPR 213
G+ L+SL+ ++ L+L G +TD+ L ++ +T L ++L Q++ G A
Sbjct: 516 GLMALTSLRGVASLNLQGCTSLTDVGLAAIGHMTSLTNVNLQDCRQITGEGFA------- 568
Query: 214 LSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT-Q 272
W G+ L +SL N S + G A+ + L LNL+
Sbjct: 569 ------GWAGMAHL---TSLSLQNASMVSDAGC--------CAIARITSLRTLNLKNCPA 611
Query: 273 VSDATLFPLSTFKELIHLSLR-NASLTDVSLHQLSSLSKLTNLSIRDA-VLTNSGLGSFK 330
++D L L+ + L HL L+ N L+D +L + + L +L + LT++GL
Sbjct: 612 LTDDCLAALTPLERLCHLRLQGNQQLSDAALAHCARMPSLQHLETSNCWHLTDAGLTRLT 671
Query: 331 PPRSLKLLDLHGGWLLTEDAILQFCK 356
+L LDL W +T+ + K
Sbjct: 672 ALTTLAHLDLSYCWQVTDRGVEHLVK 697
>gi|320102882|ref|YP_004178473.1| hypothetical protein Isop_1339 [Isosphaera pallida ATCC 43644]
gi|319750164|gb|ADV61924.1| hypothetical protein Isop_1339 [Isosphaera pallida ATCC 43644]
Length = 185
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 60/108 (55%)
Query: 102 RVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLS 161
++ + + + + L +L L+ +TDA + + S+S+L KL+L ETG+T G+A L
Sbjct: 47 KIADADVALVQAIPTLTKLVLNNNKSLTDAALDPIPSMSSLRKLYLVETGITDTGLAKLK 106
Query: 162 SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
+L +L L G VTD + SLQ + L+ L + G+ +S+ LK
Sbjct: 107 DHPSLEILSLVGTNVTDAAVPSLQAMPALKELFVAGTPISDEALRALK 154
>gi|359464005|ref|ZP_09252568.1| internalin A protein [Acaryochloris sp. CCMEE 5410]
Length = 624
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 128/246 (52%), Gaps = 20/246 (8%)
Query: 72 LRGENSVD--AEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVT 129
L+G S+D A +A + + L+ L D S + AL +T L +L++S +V
Sbjct: 294 LQGLESLDISANEIADIAILQNLQGLTQLDISSNDVSDISALQDLTTLTQLNVSSN-EVI 352
Query: 130 DAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK 189
D + L ++ L L +S+ L+ I+ L L L+ L+L ++D+ + LQ L +
Sbjct: 353 DYSV--LQGLTELTNLDVSDNQLSE--ISDLQGLHALTSLNLSYNQLSDISV--LQDLKQ 406
Query: 190 LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETD 249
L L+L + VS+ AVL+ F L+ LNL++T +T L + L+ L + ++
Sbjct: 407 LATLNLSYNPVSD--IAVLQNFKDLTTLNLSFTQITDLSTLQGLKGLT-----SLDLHSN 459
Query: 250 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 309
+ ++ALQ+L L RLN+ Q+SD + L K L L+L ++D++ L L+
Sbjct: 460 QIRDISALQDLKGLYRLNVSDNQLSDIS--ALRNLKGLFSLNLSINQISDIA--ALQDLT 515
Query: 310 KLTNLS 315
+LT+L+
Sbjct: 516 RLTSLN 521
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 126/250 (50%), Gaps = 38/250 (15%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
++++ + L SL +A + V S L LT + L R + D + LL+ L
Sbjct: 155 ISFIQDLKQLTSLGLAANKIVDISGLKDLTTLNSLNL----RSNAIDDYSV--LLNFKEL 208
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLP-VTDL-VLRSLQVLTKLEYLDLWGSQV 200
+L +S A G+A L L+ L+ LDL ++D+ VLR L KL +LDL +Q+
Sbjct: 209 SQLTVSVR--EATGLAFLQDLRGLTYLDLSYNHWISDISVLRHL---PKLTHLDLGSNQI 263
Query: 201 SNRGAAVLKMFPRLSFLNLAWTGVTKLP-----------NISSLECLNLSFIQQVGAETD 249
S+ AVL P+L+ L+L+ ++ L +IS+ E +++ +Q + T
Sbjct: 264 SD--IAVLSDLPQLTHLSLSANKISDLSVLQTLQGLESLDISANEIADIAILQNLQGLTQ 321
Query: 250 LVLS------LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS-- 301
L +S ++ALQ+L L +LN+ +V D ++ L EL +L + + L+++S
Sbjct: 322 LDISSNDVSDISALQDLTTLTQLNVSSNEVIDYSV--LQGLTELTNLDVSDNQLSEISDL 379
Query: 302 --LHQLSSLS 309
LH L+SL+
Sbjct: 380 QGLHALTSLN 389
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 108/244 (44%), Gaps = 29/244 (11%)
Query: 77 SVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHL 136
S D ++ L L LNV+ + S L LT +T L D ++ +++D H
Sbjct: 326 SNDVSDISALQDLTTLTQLNVSSNEVIDYSVLQGLTELTNLDVSD-NQLSEISDLQGLHA 384
Query: 137 LSISTLEKLWLSETGLTAD---------------GIALLSSLQNLSVLDLGGLPVTDLVL 181
L+ L LS+ + D IA+L + ++L+ L+L +TDL
Sbjct: 385 LTSLNLSYNQLSDISVLQDLKQLATLNLSYNPVSDIAVLQNFKDLTTLNLSFTQITDL-- 442
Query: 182 RSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSF 240
+LQ L L LDL +Q+ + A LK RL+ + + ++ L N+ L LNLS
Sbjct: 443 STLQGLKGLTSLDLHSNQIRDISALQDLKGLYRLNVSDNQLSDISALRNLKGLFSLNLS- 501
Query: 241 IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 300
I Q+ + ALQ+L L LN ++SD ++ L L L L + D+
Sbjct: 502 INQIS-------DIAALQDLTRLTSLNASHNRLSDISV--LQGLTRLNSLDLGANQIADI 552
Query: 301 SLHQ 304
S+ Q
Sbjct: 553 SVLQ 556
>gi|171913798|ref|ZP_02929268.1| hypothetical protein VspiD_21505 [Verrucomicrobium spinosum DSM
4136]
Length = 1196
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 129 TDAGMKHLLSI-STLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
+DA +K L SI S+L L L+ T +T G+A L+ + NL L L VTD SL+ L
Sbjct: 468 SDANLKELESIGSSLVALDLARTKVTDAGLAALAKMTNLKELHLENTAVTDAAGSSLKGL 527
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK 226
KLEYL+L+G++V+++ L+ L L L TGVT+
Sbjct: 528 AKLEYLNLYGTKVTDKILGDLEGLKALKALYLWQTGVTE 566
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 4/132 (3%)
Query: 92 LRSLNVADCRRVTSSALWALTGM-TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET 150
+LNVA R + + L L + + L LDL+R KVTDAG+ L ++ L++L L T
Sbjct: 458 FTALNVA--RDYSDANLKELESIGSSLVALDLART-KVTDAGLAALAKMTNLKELHLENT 514
Query: 151 GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKM 210
+T + L L L L+L G VTD +L L+ L L+ L LW + V+ A +
Sbjct: 515 AVTDAAGSSLKGLAKLEYLNLYGTKVTDKILGDLEGLKALKALYLWQTGVTEPAAEAFRA 574
Query: 211 FPRLSFLNLAWT 222
+N+ WT
Sbjct: 575 KRPGLLVNIGWT 586
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 120 LDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDL 179
+DL+R KVTD+G+ + ++ LE+L L T +T G+ L+ L L L+L G VTD
Sbjct: 997 VDLART-KVTDSGLAMVAGMTNLERLHLENTAITDAGLDHLAKLGKLEYLNLYGTKVTDA 1055
Query: 180 VLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
L L L+ L +W + + GA L+
Sbjct: 1056 GLAKLAAAKSLKKLFVWQTGATREGAKKLE 1085
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 145 LW--LSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
+W L+ T +T G+A+++ + NL L L +TD L L L KLEYL+L+G++V++
Sbjct: 995 IWVDLARTKVTDSGLAMVAGMTNLERLHLENTAITDAGLDHLAKLGKLEYLNLYGTKVTD 1054
Query: 203 RGAAVLKMFPRLSFLNLAWTGVTK 226
G A L L L + TG T+
Sbjct: 1055 AGLAKLAAAKSLKKLFVWQTGATR 1078
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 57/120 (47%), Gaps = 15/120 (12%)
Query: 259 NLNHLER-------LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
NL LE L+L +T+V+DA L L+ L L L N ++TD + L L+KL
Sbjct: 471 NLKELESIGSSLVALDLARTKVTDAGLAALAKMTNLKELHLENTAVTDAAGSSLKGLAKL 530
Query: 312 TNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL--LTEDAILQFCKMHPRIEV---WHE 366
L++ +T+ LG + ++LK L L W +TE A F P + V W E
Sbjct: 531 EYLNLYGTKVTDKILGDLEGLKALKALYL---WQTGVTEPAAEAFRAKRPGLLVNIGWTE 587
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 3/117 (2%)
Query: 229 NISSLECLNLSFIQQVGAETDLV-LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 287
N+ LE + S + A T + L AL + +L+ L+LE T V+DA L +L
Sbjct: 471 NLKELESIGSSLVALDLARTKVTDAGLAALAKMTNLKELHLENTAVTDAAGSSLKGLAKL 530
Query: 288 IHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGW 344
+L+L +TD L L L L L + +T +F+ R L+++ GW
Sbjct: 531 EYLNLYGTKVTDKILGDLEGLKALKALYLWQTGVTEPAAEAFRAKRPGLLVNI--GW 585
>gi|443428862|gb|AGC92230.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 120/226 (53%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+ L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLISLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++GA + + +++ L L L
Sbjct: 268 -TLGSLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTN 321
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 322 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 85/168 (50%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TDL L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDL--DPLKNLTNLNRLELSSNTISDISALSGLISLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLGSLTNLTDLDLANNQISN 287
>gi|291239173|ref|XP_002739507.1| PREDICTED: F-box and leucine-rich repeat protein 20-like
[Saccoglossus kowalevskii]
Length = 794
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 132/281 (46%), Gaps = 49/281 (17%)
Query: 40 HLADSLLRHL-IRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRY-LRSLNV 97
HL+DS ++ L + RRL + I + G N + + +L + + LR + +
Sbjct: 460 HLSDSAIKTLALNRRL-------------QKIRMEGNNRISDLGIKHLAKYCHDLRHVYL 506
Query: 98 ADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL---SISTLEKLWLSETGLTA 154
+DC R+T +AL +L+ + L+++ CV+++D+G++ ++ S + +L L+ +
Sbjct: 507 SDCPRLTDTALKSLSNCRNVSVLNIADCVRISDSGVRQMVEGPSGPKIRELNLTNCVRVS 566
Query: 155 DGIALLSSLQNLSVLDLGGL----PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKM 210
D +++L +Q L +TD + L + L +D+ G V++ G A L
Sbjct: 567 D-VSILRIMQKCHNLSYASFCFCEHITDAGVELLGSMPSLMSVDISGCNVTDSGLASLGN 625
Query: 211 FPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 270
PRL + +A EC + TDL + A Q LERL++
Sbjct: 626 NPRLLDVTIA-------------ECYQI---------TDLGIQKFA-QQCRDLERLDVSH 662
Query: 271 -TQVSDATLFPLS-TFKELIHLSLRNAS-LTDVSLHQLSSL 308
+ ++D+ + L+ + L+ L+L LTD+S+ LS +
Sbjct: 663 CSSLTDSAIKNLAFCCRRLVVLNLTGCQLLTDLSIQYLSGV 703
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 139/297 (46%), Gaps = 27/297 (9%)
Query: 92 LRSLNVADCRRVTSSALWALT---GMTCLKELDLSRCVKVTDAGMKHLL-SISTLEKLWL 147
L+ L++A C+R + L L+ G L LDLS C ++T G +++ S ++ ++L
Sbjct: 370 LQYLSLAYCKRFSDKGLQYLSHSRGCRKLIYLDLSGCTQITQEGYRNMSEGCSNIQSIFL 429
Query: 148 SETGLTADGI--ALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGS-QVSNR 203
++ D A+ S N+ + L G P ++D +++L + +L+ + + G+ ++S+
Sbjct: 430 NDNNTLKDECLSAVTSKCHNIRSMSLLGTPHLSDSAIKTLALNRRLQKIRMEGNNRISDL 489
Query: 204 GAAVLKMFP---RLSFLN----LAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTA 256
G L + R +L+ L T + L N ++ LN++ ++ V +
Sbjct: 490 GIKHLAKYCHDLRHVYLSDCPRLTDTALKSLSNCRNVSVLNIADCVRISDSG--VRQMVE 547
Query: 257 LQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRN----ASLTDVSLHQLSSLSKL 311
+ + LNL +VSD ++ L ++ +LS + +TD + L S+ L
Sbjct: 548 GPSGPKIRELNLTNCVRVSDVSI--LRIMQKCHNLSYASFCFCEHITDAGVELLGSMPSL 605
Query: 312 TNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQF---CKMHPRIEVWH 365
++ I +T+SGL S L + + + +T+ I +F C+ R++V H
Sbjct: 606 MSVDISGCNVTDSGLASLGNNPRLLDVTIAECYQITDLGIQKFAQQCRDLERLDVSH 662
>gi|219821324|gb|ACL37794.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 115/223 (51%), Gaps = 21/223 (9%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 103 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 158
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G A L
Sbjct: 159 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIGTLASL 214
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNL 268
L N + + L ++ L L L + Q + +++ + L L L L
Sbjct: 215 TNLTSLDVANNQISNLAPLSGLTKLTELELGYNQ--------ISNISPIAGLTALTSLEL 266
Query: 269 EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 267 HENQLED--ISPISNLKNLTYLALYFNNISDIS--PVSSLTKL 305
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 87/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I+ L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 77 ISPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 134
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 135 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 186 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTSLDVANNQISN 229
>gi|332868064|ref|XP_001158024.2| PREDICTED: F-box/LRR-repeat protein 13 [Pan troglodytes]
gi|397466179|ref|XP_003804845.1| PREDICTED: F-box/LRR-repeat protein 13 isoform 2 [Pan paniscus]
Length = 690
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 133/281 (47%), Gaps = 21/281 (7%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLK--ELDLSRCVKVTDAGMKHLL-SISTLEK 144
F L++L++A CRR T L L G C K LDLS C +++ G +++ S + +
Sbjct: 295 FHNLQNLSLAYCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYISNSCTGIMH 354
Query: 145 LWLSETGLTADGI--ALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQ-V 200
L +++ D AL+ ++ L G P ++D R+L KL + G++ V
Sbjct: 355 LTINDMPTLTDNCVKALVEKCSRITSLVFTGAPHISDCTFRALSA-CKLRKIRFEGNKRV 413
Query: 201 SNRGAAVL-KMFPRLSFLNLA-WTGVT-----KLPNISSLECLNLSFIQQVGAETDLVLS 253
++ + K +P LS + +A G+T L + L LNL+ ++G + L
Sbjct: 414 TDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIG-DMGLKQF 472
Query: 254 LTALQNLNHLERLNLEQ-TQVSDATLFPLST-FKELIHLSLRNAS-LTDVSLHQLSSLSK 310
L ++ + LNL ++SDA++ LS L +LSLRN LT + + ++
Sbjct: 473 LDGPASIK-IRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNIFS 531
Query: 311 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 351
L ++ + ++N GL + LK L + + +T+D I
Sbjct: 532 LVSIDLSGTDISNEGLNVLSRHKKLKELSVSECYRITDDGI 572
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 121/256 (47%), Gaps = 48/256 (18%)
Query: 117 LKELDLSRCVKVTDAGMKHLL-SISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 171
L+EL++S C TD M+H+ + L LS T +T + LL +LQNLS+
Sbjct: 247 LQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQNLSLAYC 306
Query: 172 GGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWTGVTKL 227
TD L+ L + KL YLDL G +Q+S +G +++ + TG+ L
Sbjct: 307 RRF--TDKGLQYLNLGNGCHKLIYLDLSGCTQISVQG---------FRYISNSCTGIMHL 355
Query: 228 -----PNISSLECLNLSFIQQVGAETDLVLS------------LTALQNLNHLERLNLE- 269
P ++ C+ + +++ T LV + L+A + L ++ E
Sbjct: 356 TINDMPTLTD-NCVK-ALVEKCSRITSLVFTGAPHISDCTFRALSACK----LRKIRFEG 409
Query: 270 QTQVSDATL-FPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGL 326
+V+DA+ F + L H+ + + +TD SL LS L +LT L++ + V + + GL
Sbjct: 410 NKRVTDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGL 469
Query: 327 GSF-KPPRSLKLLDLH 341
F P S+K+ +L+
Sbjct: 470 KQFLDGPASIKIRELN 485
>gi|268573952|ref|XP_002641953.1| Hypothetical protein CBG16659 [Caenorhabditis briggsae]
Length = 465
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 145/294 (49%), Gaps = 40/294 (13%)
Query: 86 LGAFRY-LRSLNVADCRRVTSSAL-WALTGMTCLKELDLSRCVKVTDAGMKHLL-SISTL 142
LG + + L+ LN+ +C +T AL + G L L++S C V D G++ ++ S +L
Sbjct: 169 LGRYCHKLKYLNLENCSSITDRALRYIGDGCPSLTYLNISWCDAVQDRGVQVIITSCVSL 228
Query: 143 EKLWLSET-GLTADGIA----LLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKL-EYLDLW 196
+ L L GLT + +SSL+ L++L VTD +R++ KL EYL L
Sbjct: 229 DTLILRGCEGLTENVFGPVETQMSSLKKLNMLQC--FQVTDTTVRNIANGAKLIEYLCLS 286
Query: 197 G-SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLT 255
+Q+++R L GV N L+ L LS +G + L+
Sbjct: 287 NCNQITDRSLIAL--------------GV----NSEHLKALELSGCILLGDNGFIQLA-- 326
Query: 256 ALQNLNHLERLNLEQTQ-VSDATLFPLSTFKELIH-LSLRNASL-TDVSLHQLSSLSKLT 312
+ HLERL++E VSD T+ L+ + +H LSL + L TD S+ L++ + T
Sbjct: 327 --KGCKHLERLDIEDCSLVSDITINSLANKCDALHELSLSHCELITDESIQNLATKHRDT 384
Query: 313 -NLSIRDAV--LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEV 363
N+ D LT++ L + + R+LK +DL+ ++++AI++F IE+
Sbjct: 385 LNVLELDNCPQLTDATLSNLRHCRALKRIDLYDCQNVSKEAIVRFQHQRANIEI 438
>gi|348575331|ref|XP_003473443.1| PREDICTED: F-box/LRR-repeat protein 2-like [Cavia porcellus]
Length = 436
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 163/341 (47%), Gaps = 25/341 (7%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC-LKELDLSRCVK 127
+ LRG V D+ + R + LN+ C ++T S ++L+ LK LDL+ CV
Sbjct: 97 LSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVS 156
Query: 128 VTDAGMKHLL-SISTLEKLWLSETG-LTADGI-ALLSSLQNLSVLDLGGLP-VTDLVLRS 183
+T++ +K + LE L LS +T +GI AL+ + L L L G + D L+
Sbjct: 157 ITNSSLKCISEGCRNLEYLNLSWCDQITREGIEALVRGCRCLKALLLRGCTQLEDEALKH 216
Query: 184 LQ-VLTKLEYLDLWG-SQVSNRGAA-VLKMFPRLSFLNLAWTGVTKLPNIS----SLECL 236
+Q +L L+L S++++ G + + +L L+L +G + L + S L C
Sbjct: 217 IQNYCHELVSLNLQSCSRITDEGVVEICRGCRQLQALSL--SGCSSLTDASLAALGLNCP 274
Query: 237 NLSFIQQVGAE--TDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTF-KELIHLSL 292
+ ++ TD +L A +N + LE+++LE+ ++D+TL LS +L LSL
Sbjct: 275 RMQILEAARCTHLTDAGFTLLA-RNCHDLEKMDLEECILITDSTLIQLSIHCPKLQALSL 333
Query: 293 RNASL-TDVSLHQLSSLS----KLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLT 347
+ L TD + LS+ + +L L + + ++++ L + RSL+ L+L+ +T
Sbjct: 334 SHCELITDDGILHLSNSTCGHKRLKVLELDNCLISDVALEHLENCRSLERLELYDCQQVT 393
Query: 348 EDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSL 388
I + P ++V + + P + +G R +
Sbjct: 394 RAGIKRMRAQLPHVKVHAYFAPVIPPTAVAGSGQRLCRCCV 434
>gi|302838698|ref|XP_002950907.1| hypothetical protein VOLCADRAFT_91370 [Volvox carteri f.
nagariensis]
gi|300264024|gb|EFJ48222.1| hypothetical protein VOLCADRAFT_91370 [Volvox carteri f.
nagariensis]
Length = 391
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 123/320 (38%), Gaps = 95/320 (29%)
Query: 9 LVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIF------------ 56
L+ LCI+AA S W QRRSLERLP H A+ LL L+ R+ F
Sbjct: 6 LLDLCIQAAANS----VHWTVQRRSLERLPEHAANELLELLLLRQSPFLGGTTTAKAALL 61
Query: 57 -------------------------------PSLLEVFKHNAEAIELRGENSVDAEWMAY 85
P+ LE+F H+ + L G +V EW+A
Sbjct: 62 TGGVKEGRVVGRGGDRGSPAAAAGGGSTPLRPATLELFLHSVTRVRLWGP-AVTLEWLAA 120
Query: 86 LGAFRYLRSLNVADCRRVTSSALWAL--------------------TGMTCLKELDLSRC 125
L F +L +L + C ++T++AL L T L+ LD+S C
Sbjct: 121 LSGFSHLETLTLTGCSKLTAAALQPLIFASGRPPASPTLTASPALTPAATSLRHLDISGC 180
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTAD----GIALLSS--LQNLSVLDLGGLPVTDL 179
++ D + L S+S L L ++ L G +L S L+ + L V+ L
Sbjct: 181 SRLGDEALPALASLSCLLSLNITAAPLPVRTFMFGYNVLGSPFLRYPCIYGPNPLAVSAL 240
Query: 180 VLRSLQV--------------LTKLEYLDLWGSQVSN-------RGAAVLKMFPRLSFLN 218
LQ L L +LDLWGS + P L +L
Sbjct: 241 AGGCLQRRAVGDEAWLSLLPHLPALRHLDLWGSDAGGGPDGGEQLLLLLAAGLPLLRYLG 300
Query: 219 LAWTGVTKLPNISSLECLNL 238
AWT ++ +P + LE L+L
Sbjct: 301 AAWTQLSTVPALPELEFLDL 320
>gi|150371858|dbj|BAF65718.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 120/226 (53%), Gaps = 19/226 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+ L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLISLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+LA ++ L +S L L ++GA + + +++ L L L
Sbjct: 268 -TLGSLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTN 321
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 322 LELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 85/168 (50%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TDL L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDL--DPLKNLTNLNRLELSSNTISDISALSGLISLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLGSLTNLTDLDLANNQISN 287
>gi|83629963|gb|ABC26643.1| internalin E [Listeria monocytogenes]
Length = 498
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 107/229 (46%), Gaps = 21/229 (9%)
Query: 156 GIALLSSLQ---NLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMF 211
GI + LQ NLS L+L VTDL L+ LTK+ L L G+ + + A A LK
Sbjct: 84 GITTIEGLQYLTNLSELELIDNQVTDL--NPLKNLTKITELRLSGNPLKDVSALAGLKNL 141
Query: 212 PRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 271
+ + T VT L +S+L+ LNL Q + +T L L++L+ L+ T
Sbjct: 142 KMMDLIYTDITDVTPLAGLSNLQVLNLDINQ--------ITDITPLAGLSNLQFLSFGST 193
Query: 272 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP 331
QVSD T PL+ +L L+ N+ ++DVS L+ LS LT + + + + S +
Sbjct: 194 QVSDLT--PLANLSKLTTLNAMNSKVSDVS--PLTGLSNLTEVYLEENQI--SDVSPLAK 247
Query: 332 PRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNG 380
+L ++ L + + Q + P + +I P D I NG
Sbjct: 248 LPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAP-DTISDNG 295
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 99/197 (50%), Gaps = 22/197 (11%)
Query: 106 SALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQN 165
+ + L +T L EL+L +VTD + L +++ + +L LS G ++ L+ L+N
Sbjct: 86 TTIEGLQYLTNLSELELIDN-QVTD--LNPLKNLTKITELRLS--GNPLKDVSALAGLKN 140
Query: 166 LSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV- 224
L ++DL +TD+ L L+ L+ L+L +Q+++ L L FL+ T V
Sbjct: 141 LKMMDLIYTDITDVT--PLAGLSNLQVLNLDINQITD--ITPLAGLSNLQFLSFGSTQVS 196
Query: 225 --TKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 282
T L N+S L LN A V ++ L L++L + LE+ Q+SD + PL+
Sbjct: 197 DLTPLANLSKLTTLN--------AMNSKVSDVSPLTGLSNLTEVYLEENQISDVS--PLA 246
Query: 283 TFKELIHLSLRNASLTD 299
L ++L N ++T+
Sbjct: 247 KLPNLSIVTLTNQTITN 263
>gi|320166209|gb|EFW43108.1| ephrin type-B receptor 3 [Capsaspora owczarzaki ATCC 30864]
Length = 1219
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 103/229 (44%), Gaps = 6/229 (2%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
+TS + + G+T L L+ C ++T +S L + +S +T+ + S
Sbjct: 113 ITSISANSFAGLTVLNLLNSYNC-QITSIAANAFTDLSKLTNMQMSGNQITSIAPNVFSG 171
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT 222
+ L +L L G +T + + LT L YL L +Q+S + L FP +S L +
Sbjct: 172 MSALKILYLNGNQITSISASAFTGLTALTYLSLDSNQIS---SIALNAFPGMSALKILRL 228
Query: 223 GVTKLPNISSLECLNLSFIQQVGAETDLVLSLT--ALQNLNHLERLNLEQTQVSDATLFP 280
+ ++ IS+ +LS ++++ + + S++ A L L L L Q++ +
Sbjct: 229 NINQITGISAGVFTDLSALKELWLNDNQITSISANAFTGLTALTFLRLYVNQITSISPGA 288
Query: 281 LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 329
+ L L L +T +S + + L+ LT L + +T+ G+F
Sbjct: 289 FTDLGALTTLILSTNKITSISENAFTGLTALTFLQLDANQITSISAGAF 337
>gi|313485081|gb|ADR53011.1| InlA [Listeria monocytogenes]
Length = 800
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLFFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 85/168 (50%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +L
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLF 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|158297467|ref|XP_317696.4| AGAP007807-PA [Anopheles gambiae str. PEST]
gi|157015209|gb|EAA12920.4| AGAP007807-PA [Anopheles gambiae str. PEST]
Length = 422
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 68/125 (54%), Gaps = 10/125 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTC--LKELDLSRCVKVTDAGMKHL-LSISTLEKLW 146
+YL +L VA C + T S AL C L+ +DL C +TDA +++L L +LEKL
Sbjct: 259 QYLNTLEVAGCAQFTDSGFIAL-AKNCKYLERMDLEECSLITDATLQNLALGCPSLEKLT 317
Query: 147 LSETGLTAD-GIALLS----SLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQV 200
LS L D GI L+ + ++LSVL+L P +TD L L L+ ++L+ Q+
Sbjct: 318 LSHCELITDEGIRQLAGGGCAAESLSVLELDNCPLITDATLEHLISCHNLQRIELYDCQL 377
Query: 201 SNRGA 205
+R A
Sbjct: 378 ISRNA 382
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 152/346 (43%), Gaps = 58/346 (16%)
Query: 87 GAFRYLRSLNVADCRRVTSSALWALTGMTC--LKELDLSRCVKVTDAGMKHL------LS 138
G +YLR + C+ V S ++ L C ++ LDLS C K++D ++ L L+
Sbjct: 77 GFLKYLR---LRGCQSVGSHSIRTLANY-CHNIEHLDLSECKKISDVAIQQLSKNCAKLT 132
Query: 139 ISTLEKL-WLSETGLTA--DGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
LE +S++ L A DG LS + N+S +L + + R + K +
Sbjct: 133 AINLESCSQISDSSLKALSDGCPNLSEI-NVSWCNLITENGVEALARGCNKIKK--FSSK 189
Query: 196 WGSQVSNRGAAVLKMF-PRLSFLNLAWTGVTKLPNISSL--ECLNLS--FIQQVGAETDL 250
QV++R L ++ P + LNL +IS + +C NL + + TD
Sbjct: 190 GCKQVNDRAVIALALYCPGIEVLNLHSCDSITDASISKIAEKCCNLKQLCVSKCTELTDQ 249
Query: 251 VLSLTAL-------------------------QNLNHLERLNLEQTQ-VSDATLFPLS-T 283
L+ A+ +N +LER++LE+ ++DATL L+
Sbjct: 250 SLTALAMNNQYLNTLEVAGCAQFTDSGFIALAKNCKYLERMDLEECSLITDATLQNLALG 309
Query: 284 FKELIHLSLRNASL-TDVSLHQLS----SLSKLTNLSIRDA-VLTNSGLGSFKPPRSLKL 337
L L+L + L TD + QL+ + L+ L + + ++T++ L +L+
Sbjct: 310 CPSLEKLTLSHCELITDEGIRQLAGGGCAAESLSVLELDNCPLITDATLEHLISCHNLQR 369
Query: 338 LDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSP 383
++L+ L++ +AI + P I+V + + P I NGP P
Sbjct: 370 IELYDCQLISRNAIRRLRNHLPNIKVHAYFAPVTPPPTI--NGPRP 413
>gi|47217481|emb|CAG10250.1| unnamed protein product [Tetraodon nigroviridis]
Length = 673
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 140/305 (45%), Gaps = 21/305 (6%)
Query: 33 SLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNA-EAIELRGENSVDAEWMAYLGAFRY 91
SL L L + LL H+ R RL+ P LE+F + L E + L AF
Sbjct: 270 SLAGLTPELVELLLNHMSRERLLRPRSLELFFGCPLQKFVLNCYPYCTNELLRQLRAFPA 329
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL--SISTLEKLWLSE 149
LR L++ V S + L + C LD + KVTDAGM L + S L +L L++
Sbjct: 330 LRHLSL-----VNSPLITGLKNL-CFLSLDQT---KVTDAGMVLYLHSAPSCLAQLSLNQ 380
Query: 150 TGLTADGIALLSSL-QNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
T +T +A+L S L +L + V D+ +L L+ L L+L G+ VS G L
Sbjct: 381 TAVTEATLAVLPSCTPQLRLLSIKQTKVRDVA--ALARLSGLHTLNLDGTDVSESGLEHL 438
Query: 209 KMFPRLSFLNLAWTGVTK----LPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLE 264
P LS L+LA VT L IS L L+ + TD L+ + + E
Sbjct: 439 ASHPLLSSLSLAGISVTDGNQALQIISGLNLTQLTLPGRRSV-TDSGLA-SVCRLTLLTE 496
Query: 265 RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS 324
+ TQV+D + L++ + L LSL N +TD L L L +L +L + +T+
Sbjct: 497 LDLTDYTQVTDQGVAQLASMRRLKKLSLSNTQVTDAGLSPLRGLQELQDLCLDRTAVTSR 556
Query: 325 GLGSF 329
G+ +
Sbjct: 557 GVAAL 561
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 72/139 (51%), Gaps = 8/139 (5%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
L L + R VT S L ++ +T L ELDL+ +VTD G+ L S+ L+KL LS T
Sbjct: 469 LTQLTLPGRRSVTDSGLASVCRLTLLTELDLTDYTQVTDQGVAQLASMRRLKKLSLSNTQ 528
Query: 152 LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL-QVLTKLEYLDLWGSQVSN----RGAA 206
+T G++ L LQ L L L VT + +L L L+ L L +QV + RG
Sbjct: 529 VTDAGLSPLRGLQELQDLCLDRTAVTSRGVAALIACLPHLQVLGLACTQVGDTVVRRG-- 586
Query: 207 VLKMFPRLSFLNLAWTGVT 225
L P+L LNL+ T +T
Sbjct: 587 -LLRCPQLVKLNLSRTRIT 604
>gi|167861930|gb|ACA05664.1| InlA [Listeria monocytogenes]
gi|167862036|gb|ACA05717.1| InlA [Listeria monocytogenes]
gi|194239408|emb|CAQ76844.1| internalin A [Listeria monocytogenes]
gi|222543296|gb|ACM66668.1| internalin A [Listeria monocytogenes]
gi|298359976|gb|ADI77567.1| internalin A [Listeria monocytogenes]
gi|298360582|gb|ADI77870.1| internalin A [Listeria monocytogenes]
gi|298360712|gb|ADI77935.1| internalin A [Listeria monocytogenes]
gi|298360716|gb|ADI77937.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLFFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 85/168 (50%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +L
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLF 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|290998998|ref|XP_002682067.1| predicted protein [Naegleria gruberi]
gi|284095693|gb|EFC49323.1| predicted protein [Naegleria gruberi]
Length = 427
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 138/315 (43%), Gaps = 65/315 (20%)
Query: 55 IFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNV-ADCRRVTSSALWALTG 113
IF + ++ K + +++ GE+ + A + + L+SL + AD V S+AL +
Sbjct: 99 IFAKMSQLTKLDISGLKI-GEDGIKA-----ISQLKQLKSLYLYAD---VDSNALNGVFE 149
Query: 114 MTCLKELDLSR--CVKVTDAGMKHLLSISTLEKLW------------------------- 146
MT L ELD++R C + + G K L ++ L+KL
Sbjct: 150 MTQLTELDINRKQCHR-WNGGFKKLKQLTNLKKLCAVGCCIDYEDVFQSISQLDQLTELH 208
Query: 147 LSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAA 206
++ L +DG L+ L+NL++LD+ V N G
Sbjct: 209 IASNSLYSDGAKLIGKLKNLTILDISYCGVC---------------------IPHNEGLE 247
Query: 207 VLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLT-ALQNLNHLER 265
+ L++L+ A G+ + IS LE NL+F++ + + SL ++ L L
Sbjct: 248 SISELINLTYLDCANNGLRSIGPISKLE--NLTFLR---VSLNRISSLDESIVKLKKLTN 302
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 325
L++ +SD + S+ K+L L ++ ++ D S +S +S+L NL I ++++ G
Sbjct: 303 LDVGYNSISDQSAEVFSSMKQLTSLFIQENNIGDKSAKSISEISQLKNLCIDSNIVSDKG 362
Query: 326 LGSFKPPRSLKLLDL 340
S +L LD+
Sbjct: 363 AKSISTMENLTELDI 377
>gi|168701211|ref|ZP_02733488.1| leucine-rich repeat domain protein [Gemmata obscuriglobus UQM 2246]
Length = 702
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 70/156 (44%), Gaps = 27/156 (17%)
Query: 88 AFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWL 147
A ++LR+L +T W + M L+ + LS ++TDAG + L ++ L+ L L
Sbjct: 519 ALKHLRALMTGGAG-ITDEGAWDVARMKRLECVSLSDTRRLTDAGARDLAALPNLKHLCL 577
Query: 148 SETGLTADGIALLSSLQ------------------------NLSVLDLGGLPVTDLVLRS 183
S TG+T +G+ +L+ ++ L LDL G P +
Sbjct: 578 SRTGVTDEGVQVLAGVKTLRTLWLSEIKVGPAGVAALGRHPGLVALDLSGAPRGE--AEP 635
Query: 184 LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL 219
L +T LEYL+L G+ R A L P L L+L
Sbjct: 636 LAGITTLEYLNLAGALTGERTLAALAKLPHLRVLHL 671
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 101/233 (43%), Gaps = 21/233 (9%)
Query: 120 LDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDL---GG--L 174
LDLS VT AG+K L L+ L L T A GI L+ L+ LS L L GG
Sbjct: 406 LDLS-GQPVTGAGLKELTVFRNLDTLVLRNT-RVAGGIGALADLRKLSALTLPLYGGDDR 463
Query: 175 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW--TGVTKLPNISS 232
VT +R L L LE L L G V AV + P L+ L+ + T + + P +
Sbjct: 464 AVTPAEMRRLAALDTLEELHLHGVLVPGMARAVASI-PNLTTLSGTFQDTDLREFPALKH 522
Query: 233 LECL--NLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTFKELIH 289
L L + I GA + + LE ++L T+ ++DA L+ L H
Sbjct: 523 LRALMTGGAGITDEGAWD--------VARMKRLECVSLSDTRRLTDAGARDLAALPNLKH 574
Query: 290 LSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 342
L L +TD + L+ + L L + + + +G+ + L LDL G
Sbjct: 575 LCLSRTGVTDEGVQVLAGVKTLRTLWLSEIKVGPAGVAALGRHPGLVALDLSG 627
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 91/200 (45%), Gaps = 16/200 (8%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 176
L LDLS +V D +K L + L+ L L T +T G+ L++++ L LDL L V
Sbjct: 196 LTHLDLS-FSRVGDDDLKLLAAFPKLKSLRLERTQVTDAGMKHLAAVEGLEALDLSRLRV 254
Query: 177 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV-TKLPNISS-LE 234
TD L+ L L L L L +QV+ G L+ F +LA +G K +++ +
Sbjct: 255 TDAGLKELAGLKNLRALTLLFTQVTGAG---LRPFAGAGLTHLALSGSKVKAADVADVVA 311
Query: 235 CLNLSFIQQVGA-ETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL--IHLS 291
C L+ + G D V L L L L+ + + L LS +L +HL
Sbjct: 312 CRALAALAVEGRWPADAVAQLAGLPELRS---LHFQSDLLDGKVLAELSGASKLEAVHL- 367
Query: 292 LRNASLTDVSLHQLSSLSKL 311
A++TD +L L KL
Sbjct: 368 ---ATVTDDALAGLRRAGKL 384
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 81/180 (45%), Gaps = 17/180 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF 216
+A ++ + N++ + L T LR+L L +LDL S+V + +L FP+L
Sbjct: 163 LAEIAKIDNVTYIGLSSSRDTGAKLRALAAAKGLTHLDLSFSRVGDDDLKLLAAFPKLKS 222
Query: 217 LNLAWTGVTK-----LPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 271
L L T VT L + LE L+LS ++ A L L L +L L L T
Sbjct: 223 LRLERTQVTDAGMKHLAAVEGLEALDLSRLRVTDA------GLKELAGLKNLRALTLLFT 276
Query: 272 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR-----DAVLTNSGL 326
QV+ A L P + L HL+L + + + + + L L++ DAV +GL
Sbjct: 277 QVTGAGLRPFAGAG-LTHLALSGSKVKAADVADVVACRALAALAVEGRWPADAVAQLAGL 335
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 232 SLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 291
L L+LSF +VG + DL L L L+ L LE+TQV+DA + L+ + L L
Sbjct: 195 GLTHLDLSF-SRVG-DDDLKL----LAAFPKLKSLRLERTQVTDAGMKHLAAVEGLEALD 248
Query: 292 LRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 329
L +TD L +L+ L L L++ +T +GL F
Sbjct: 249 LSRLRVTDAGLKELAGLKNLRALTLLFTQVTGAGLRPF 286
>gi|887868|gb|AAA69533.1| internalin, partial [Listeria monocytogenes]
Length = 344
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 117/224 (52%), Gaps = 21/224 (9%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L L +VTD +K L +++TLE+L +S
Sbjct: 86 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSLGN--QVTD--LKPLANLTTLERLDIS 141
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AV 207
++ I++L+ L NL L ++D+ L +LT + L L G+Q+ + G A
Sbjct: 142 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNWDELSLNGNQLKDIGTLAS 197
Query: 208 LKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLN 267
L L N + + LP ++ L L ++GA + +++ L L L L
Sbjct: 198 LTNLTDLDLANNQISNLAPLPGLTKLTEL------KLGANQ--ISNISPLAGLTALTNLE 249
Query: 268 LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 250 LNENQLEDIS--PISNLKNLTYLTLYFNNISDIS--PVSSLTKL 289
>gi|318053999|ref|NP_001188265.1| Fbxl16 protein-like [Danio rerio]
Length = 493
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 76/151 (50%), Gaps = 20/151 (13%)
Query: 64 KHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSAL-WALTGMTCLKELDL 122
K + +EL EN R LRSL+++ C R+T AL + + L+EL L
Sbjct: 346 KITDDGVELVAEN------------LRKLRSLDLSWCPRITDMALEYIACDLHKLEELVL 393
Query: 123 SRCVKVTDAGMKHLLSISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDLGGLP-VTDLV 180
RCV++TD G+ +L ++STL L+L D G+ L +++L +L L G P +T
Sbjct: 394 DRCVRITDTGLGYLSTMSTLRSLYLRWCCQVQDFGLQHLYGMRSLRLLSLAGCPLLTTTG 453
Query: 181 LRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF 211
L L L LE L+L +N A ++F
Sbjct: 454 LSGLIQLQDLEELEL-----TNCPGATAELF 479
>gi|345327823|ref|XP_003431205.1| PREDICTED: F-box/LRR-repeat protein 13-like [Ornithorhynchus
anatinus]
Length = 843
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 85/166 (51%), Gaps = 13/166 (7%)
Query: 95 LNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL---SISTLEKLWLSETG 151
++VADC+R+T S L A++ + L L+LS C +++D G+K L S + +L L+
Sbjct: 539 IHVADCQRITDSGLKAISTLRKLHVLNLSYCTRISDTGVKQFLDGHSSPKIRELNLTHCN 598
Query: 152 LTADG--IALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
+D + QNL+ L L +TD + L L+ L +DL G+ +S+ G A L
Sbjct: 599 RISDASLFKISQRCQNLNYLSLRYCDQLTDSGIEILGHLSSLFSIDLSGTTISDSGLAAL 658
Query: 209 KMFPRLSFLNLA-WTGVTKL------PNISSLECLNLSFIQQVGAE 247
++ L ++ +T L N ++L+ L++S+ Q+ E
Sbjct: 659 GQHGKIKQLTVSECKNITDLGIQVFCENTTALDYLDVSYCLQLSCE 704
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 136/287 (47%), Gaps = 28/287 (9%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHL-LSISTLEKLWL 147
F L + NV C V S + L + L+E +K+T G +++ S ++ L +
Sbjct: 408 FHMLATRNVKKCLLVFVSLI--LIRLPVLEENGFEWEMKITVQGFQYIGTKCSIVQHLII 465
Query: 148 SETGLTADGI--ALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDL------WGS 198
++ D AL + Q ++ L L G P +TD+ + Q L++ + + L W +
Sbjct: 466 NDMPTLTDSCVKALAGNCQQITSLILSGTPALTDV---AFQALSECKLVKLRVGGNNWIT 522
Query: 199 QVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSFIQQVGAETDLVL 252
VS + + K +P +S +++A +G+ + + L LNLS+ ++ ++T +
Sbjct: 523 DVSFK--VIQKYWPNISHIHVADCQRITDSGLKAISTLRKLHVLNLSYCTRI-SDTGVKQ 579
Query: 253 SLTALQNLNHLERLNLEQ-TQVSDATLFPLST-FKELIHLSLRNAS-LTDVSLHQLSSLS 309
L + + LNL ++SDA+LF +S + L +LSLR LTD + L LS
Sbjct: 580 FLDG-HSSPKIRELNLTHCNRISDASLFKISQRCQNLNYLSLRYCDQLTDSGIEILGHLS 638
Query: 310 KLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 356
L ++ + +++SGL + +K L + +T+ I FC+
Sbjct: 639 SLFSIDLSGTTISDSGLAALGQHGKIKQLTVSECKNITDLGIQVFCE 685
>gi|115444885|ref|NP_001046222.1| Os02g0200900 [Oryza sativa Japonica Group]
gi|46390386|dbj|BAD15850.1| putative F-box protein [Oryza sativa Japonica Group]
gi|113535753|dbj|BAF08136.1| Os02g0200900 [Oryza sativa Japonica Group]
Length = 511
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 141/299 (47%), Gaps = 39/299 (13%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMT-CLKELDLSRCVKVTDAGMKHLL-SIS 140
MA + LR ++V C VT+ AL A+ L++L +C +TDAG+K S
Sbjct: 208 MANAAGLQNLRCMSVTSCPGVTNLALAAIAKFCPSLRQLSFRKCGHMTDAGLKAFTESAR 267
Query: 141 TLEKLWLSET-GLTADGI-----------ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLT 188
LE L L E G+T GI LS ++ + + D+ P + +SLQ LT
Sbjct: 268 LLESLQLEECNGVTLVGILDFLVNCGPKFRSLSLVKCMGIKDICSTPAQLPLCKSLQFLT 327
Query: 189 KLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW----TGVTKLPNISSLEC----LNLSF 240
+ D + + A V + P L ++L+ T LP I+S E ++LS
Sbjct: 328 IKDCPDFTDASL----AVVGMVCPYLEQVDLSGLREVTDRGLLPLINSSEGGLVKVDLSG 383
Query: 241 IQQVGAETDLVLSLTALQNLNHLERLNLEQ-TQVSDATLFPLS-TFKELIHLSLRNASLT 298
+ + TD +S + L++++LE ++++DA+LF +S EL L L ++
Sbjct: 384 CKNI---TDAAVSTLVKGHGKSLKQVSLEGCSKITDASLFAISENCTELAELDLSKCMVS 440
Query: 299 DVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKM 357
D + +++L+ +L +R VL+ SG S P+S+ L G L E LQFC M
Sbjct: 441 D---NGVATLASAKHLKLR--VLSLSGC-SKVTPKSVSFLGNMGQSL--EGLNLQFCNM 491
>gi|449463292|ref|XP_004149368.1| PREDICTED: F-box/LRR-repeat protein 3-like [Cucumis sativus]
Length = 663
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 151/359 (42%), Gaps = 83/359 (23%)
Query: 77 SVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTG-MTCLKELDLSRCVKVTDAGMKH 135
S+ + L F L+S+ + DC +T+S + + LKEL LS+C VTD +
Sbjct: 303 SITTDMAKCLHNFSGLQSIKL-DCCSLTTSGVKTIANWRASLKELSLSKCAGVTDECLSI 361
Query: 136 LL--------------------SISTL--------------------------------- 142
L+ SI+++
Sbjct: 362 LVQKHKQLRKLDITCCRKITYGSINSITSSCSFLVSLKMESCSLVPREAYVLIGQRCPYL 421
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLG-GLPVTDLVLRSLQV-LTKLEYLDLWGSQ- 199
E+L L++ + +G+ +S LSVL LG L + D L + K++ LDL+ S
Sbjct: 422 EELDLTDNEIDNEGLKSISKCSRLSVLKLGICLNINDDGLCHIASGCPKIKELDLYRSTG 481
Query: 200 VSNRG-AAVLKMFPRLSFLNLAWTG-VTKLPNISSLECLNLSFIQQVGAETDLVLSLTAL 257
+++RG AA P L +N+A+ +T IS +CLNL ++ G + L+A+
Sbjct: 482 ITDRGIAATAGGCPALEMINIAYNDKITDSSLISLSKCLNLKALEIRGCCCISSIGLSAI 541
Query: 258 -QNLNHLERLNLEQ-TQVSDATLFPLSTFKE-LIHLSLRNASLTDVSLHQLSSLSKLTNL 314
L L++++ V+D + PL+ F L ++L S+TDV L L+S++ L N+
Sbjct: 542 AMGCKQLTVLDIKKCVNVNDDGMLPLAQFSHNLKQINLSYCSVTDVGLLSLASINCLRNM 601
Query: 315 SI-----------RDAVLTNSGLG------SFK---PPRSLKLLDLHGGWLLTEDAILQ 353
+I A+L SGL SFK PP K ++ G L D Q
Sbjct: 602 TILHLAGLTPDGLTAALLVGSGLRKVKLHLSFKSSLPPSFRKYMETRGCILYWRDKAFQ 660
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 115/258 (44%), Gaps = 55/258 (21%)
Query: 92 LRSLNVADCRRVTSSALWAL-TGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET 150
LRS++++ R ++ L L T T L E++LS V +TD+ +K L LEKLWLS
Sbjct: 110 LRSIDLSRSRSFSNVGLSNLVTSCTGLVEINLSNGVALTDSVIKVLAEAKNLEKLWLSRC 169
Query: 151 GLTAD---------------------------GIALLSS-LQNLSVLDLGGLPVTDLVLR 182
D G+ L+++ + L LDL LP+T+ L
Sbjct: 170 KSITDMGIGCVAVGCKKLKLLCLNWCLHITDLGVGLIATKCKELRSLDLSFLPITEKCLP 229
Query: 183 SLQVLTKLEYLDLWGSQ-VSNRGAAVLKMFPR---LSFLNLAWTGVTKLPNIS------- 231
++ L LE L L + + G LK + L FLNL ++ P+IS
Sbjct: 230 TILQLQHLEELILEECHGIDDEGLEALKRNCKRNSLKFLNL-----SRCPSISHSGLSSL 284
Query: 232 -----SLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFK- 285
+L+ LNLS+ V TD+ L N + L+ + L+ ++ + + ++ ++
Sbjct: 285 IIGSENLQKLNLSYGSSVSITTDMA---KCLHNFSGLQSIKLDCCSLTTSGVKTIANWRA 341
Query: 286 ELIHLSL-RNASLTDVSL 302
L LSL + A +TD L
Sbjct: 342 SLKELSLSKCAGVTDECL 359
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 7/113 (6%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC--LKELDLSRC 125
E I + + + + L L++L + C ++S L A+ M C L LD+ +C
Sbjct: 498 EMINIAYNDKITDSSLISLSKCLNLKALEIRGCCCISSIGLSAI-AMGCKQLTVLDIKKC 556
Query: 126 VKVTDAGMKHLLSIS-TLEKLWLSETGLTADG---IALLSSLQNLSVLDLGGL 174
V V D GM L S L+++ LS +T G +A ++ L+N+++L L GL
Sbjct: 557 VNVNDDGMLPLAQFSHNLKQINLSYCSVTDVGLLSLASINCLRNMTILHLAGL 609
>gi|48146359|emb|CAG33402.1| FBXL2 [Homo sapiens]
Length = 423
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 160/342 (46%), Gaps = 26/342 (7%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC-LKELDLSRCVK 127
+ LRG V D+ + R + LN+ C ++T S ++L+ LK LDL+ CV
Sbjct: 83 LSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVS 142
Query: 128 VTDAGMKHLL-SISTLEKLWLSETG-LTADGI-ALLSSLQNLSVLDLGGLP-VTDLVLRS 183
+T++ +K + LE L LS +T DGI AL+ + L L L G + D L+
Sbjct: 143 ITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKH 202
Query: 184 LQ-VLTKLEYLDLWG-SQVSNRGAA-VLKMFPRLSFLNLAWTGVTKLPNIS----SLECL 236
+Q +L L+L S++++ G + + RL L L +G + L + S L C
Sbjct: 203 IQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCL--SGCSNLTDASLTALGLNCP 260
Query: 237 NLSFIQQVGAE--TDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTF-KELIHLSL 292
L ++ TD +L A +N + LE+++LE+ ++D+TL LS +L LSL
Sbjct: 261 RLQILEAARCSHLTDAGFTLLA-RNCHELEKMDLEECILITDSTLIQLSIHCPKLQALSL 319
Query: 293 RNASL-TDVSLHQLSSLS----KLTNLSIRDAVL-TNSGLGSFKPPRSLKLLDLHGGWLL 346
+ L TD + LS+ + L L + + +L T+ L + R L+ L+L+ +
Sbjct: 320 SHCELITDDGILHLSNSTCGHEGLRVLELDNCLLITDVALEHLENCRGLERLELYDCQQV 379
Query: 347 TEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSL 388
T I + P ++V + + P + +G R +
Sbjct: 380 TRAGIKRMRAQLPHVKVHAYFAPVTPPTAVAGSGQRLCRCCV 421
>gi|74200920|dbj|BAE37357.1| unnamed protein product [Mus musculus]
Length = 423
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 162/342 (47%), Gaps = 26/342 (7%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC-LKELDLSRCVK 127
+ LRG V D+ + R + LN+ C ++T S ++L+ LK LDL+ CV
Sbjct: 83 LSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVS 142
Query: 128 VTDAGMKHLL-SISTLEKLWLSETG-LTADGI-ALLSSLQNLSVLDLGGLP-VTDLVLRS 183
VT++ +K + LE L LS +T +GI AL+ + L L L G + D L+
Sbjct: 143 VTNSSLKGISEGCRNLEYLNLSWCDQITKEGIEALVRGCRGLKALLLRGCTQLEDEALKH 202
Query: 184 LQV-LTKLEYLDLWG-SQVSNRGAA-VLKMFPRLSFLNLAWTGVTKLPNIS----SLECL 236
+Q +L L+L S++++ G + + RL L L +G + L + S L C
Sbjct: 203 IQNHCHELVSLNLQSCSRITDDGVVQICRGCHRLQALCL--SGCSNLTDASLTALGLNCP 260
Query: 237 NLSFIQQVGAE--TDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTF-KELIHLSL 292
L ++ TD +L A +N + LE+++LE+ ++D+TL LS +L LSL
Sbjct: 261 RLQVLEAARCSHLTDAGFTLLA-RNCHELEKMDLEECVLITDSTLVQLSIHCPKLQALSL 319
Query: 293 RNASL-TDVSLHQLSSLS----KLTNLSIRDAVL-TNSGLGSFKPPRSLKLLDLHGGWLL 346
+ L TD + LSS + +L L + + +L T++ L + R L+ L+L+ +
Sbjct: 320 SHCELITDEGILHLSSSTCGHERLRVLELDNCLLVTDASLEHLENCRGLERLELYDCQQV 379
Query: 347 TEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSL 388
T I + P ++V + + P + +G R +
Sbjct: 380 TGAGIKRMRAQLPHVKVHAYFAPVTPPPAVAGSGHRLCRCCV 421
>gi|413936142|gb|AFW70693.1| F-box family member [Zea mays]
Length = 643
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 143/298 (47%), Gaps = 39/298 (13%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMT-CLKELDLSRCVKVTDAGMKHLL-SIS 140
MA + LR ++V C VT AL ++ LK+L L +C V+DAG+K S
Sbjct: 342 MANAAGLQNLRCMSVTSCPGVTDLALASIAKFCPSLKKLYLRKCGHVSDAGLKAFTESAK 401
Query: 141 TLEKLWLSETG-LTADGI-ALLSSLQNLSVLDL-GGLPVTDLV-------LRSLQVLTKL 190
E L L E +T GI A L+ Q L L + + D+ RSL+ LT
Sbjct: 402 VFENLQLEECNRVTLVGILAFLNCSQKFRALSLVKCMGIKDICSVPQLPFCRSLRFLT-- 459
Query: 191 EYLDLWGSQVSNRGAAVLKMF-PRLSFLNLAWTG-VTK---LPNISSLEC----LNLSFI 241
D G +N AV+ M P+L ++L+ G VT LP I S E ++LS
Sbjct: 460 -IKDCPG--FTNASLAVVGMICPQLEQVDLSGLGEVTDNGLLPLIQSSESGLIKVDLSGC 516
Query: 242 QQVGAETDLVLSLTALQNLNHLERLNLEQ-TQVSDATLFPLS-TFKELIHLSLRNASLTD 299
+ + TD+ +S ++ L++++LE ++++DA+LF +S + EL L L N ++D
Sbjct: 517 KNI---TDVAVSSLVKRHGKSLKKVSLEGCSKITDASLFTMSESCTELAELDLSNCMVSD 573
Query: 300 VSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKM 357
+ L+S +L +R VL+ SG S +S+ L G L E LQFC M
Sbjct: 574 YGVAMLASAR---HLKLR--VLSLSGC-SKVTQKSVPFLGNLGQSL--EGLNLQFCNM 623
>gi|405960168|gb|EKC26111.1| F-box/LRR-repeat protein 20 [Crassostrea gigas]
Length = 413
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 155/355 (43%), Gaps = 54/355 (15%)
Query: 50 IRRRLIFPSLLEVFKHNA---EAIELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTS 105
+R ++ P + + K +++ L G S+ DA + + R + LN+ +C+ +T
Sbjct: 75 FQRDVVGPVVENISKRCGGFLKSLSLLGCQSITDAALKTFAQSCRNIEELNLNNCKEITD 134
Query: 106 SALWALT--GMTCLKELDLSRCVKVTDAGMK---------HLLSISTLEKLWLSETGLTA 154
+ +L G L LD+S C +VT+ +K H+L+IS W T +T
Sbjct: 135 TTCESLGHHGHK-LVSLDISSCPQVTNQSLKALGDGCHSLHVLNIS-----WC--TKITN 186
Query: 155 DGIALLS-SLQNLSVLDLGGLP--VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF 211
DG+ LS NL GL +TD E L G + +
Sbjct: 187 DGLEALSKGCHNLHTFIGKGLSQSITD------------EALHRVGQHCNQLLFICISNC 234
Query: 212 PRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 271
RL+ +L G PNI +LE S G + +N N LE+++LE+
Sbjct: 235 ARLTDASLVSLG-QGCPNIRTLEAACCSHFTDNGFQA-------LARNCNKLEKMDLEEC 286
Query: 272 -QVSDATLFPLSTFKELIH-LSLRNASL-TDVSLHQLSSLSKLTN----LSIRDA-VLTN 323
Q++DATL L+ F I L+L + L TD + + S + T L + + ++T+
Sbjct: 287 IQITDATLNYLANFCPNISALTLSHCELITDEGIRHIGSGACATEQLRILELDNCPLITD 346
Query: 324 SGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGS 378
+ L ++L+ ++L+ L+T+ AI + P I+V + + P +GS
Sbjct: 347 ASLEHLTGCQNLERIELYDCQLITKAAIRRLRTRLPNIKVHAYFAPVTPPPAVGS 401
>gi|320165418|gb|EFW42317.1| tyrosine-protein kinase CSK [Capsaspora owczarzaki ATCC 30864]
Length = 953
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 113/262 (43%), Gaps = 19/262 (7%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
RY+ S +TS A TG+T L EL L ++T ++ L L+ +
Sbjct: 4 RYINS------NPITSIPTNAFTGLTALTELSL-LYNQITGISAGTFTGLTALTALYFAS 56
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN-RGAAVL 208
+T+ + L L+ L L +T + + LT L YL L +Q+++ G A
Sbjct: 57 NQITSIPADAFTGLTALTHLSLQYNQITSISGTAFTSLTALTYLSLQYNQITSISGTAFT 116
Query: 209 KMFPRLSFLNLAWTGVTKLP-----NISSLECLNLSFIQQVGAETDLVLSLTALQNLNHL 263
L++L+L +T +P +++L L+L + Q+ + +S+ A L L
Sbjct: 117 FNLTALTYLSLDSNQITSIPVGAFTGLTALTYLSL-YTNQITS-----ISVNAFTGLTAL 170
Query: 264 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
L L+ Q++ + L LSL +T + + L+ LT LS+ + +T+
Sbjct: 171 ASLVLQNNQITSIPAAACTGLPALTELSLGINQITSIPADAFTGLTALTYLSVENNQITS 230
Query: 324 SGLGSFKPPRSLKLLDLHGGWL 345
G+F +L L L G +
Sbjct: 231 IPAGAFTDLAALTDLHLDGNQI 252
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 1/133 (0%)
Query: 99 DCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIA 158
D ++TS + A TG+T L L L ++T + ++ L L L +T+ A
Sbjct: 128 DSNQITSIPVGAFTGLTALTYLSL-YTNQITSISVNAFTGLTALASLVLQNNQITSIPAA 186
Query: 159 LLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN 218
+ L L+ L LG +T + + LT L YL + +Q+++ A L+ L+
Sbjct: 187 ACTGLPALTELSLGINQITSIPADAFTGLTALTYLSVENNQITSIPAGAFTDLAALTDLH 246
Query: 219 LAWTGVTKLPNIS 231
L +T +P+ S
Sbjct: 247 LDGNQITSIPDFS 259
>gi|224140535|ref|XP_002323638.1| predicted protein [Populus trichocarpa]
gi|222868268|gb|EEF05399.1| predicted protein [Populus trichocarpa]
Length = 668
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 141/298 (47%), Gaps = 37/298 (12%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWAL-TGMTCLKELDLSRCV 126
++++L G A A L L+++ C VT L +L T LK+LD++ C
Sbjct: 310 QSVKLDGCAVTSAGLTAIGNWCITLSELSLSKCVGVTDEGLSSLVTKHKDLKKLDITCCR 369
Query: 127 KVTDAGMKHLLSIST---------------------------LEKLWLSETGLTADGIAL 159
K+TD + ++ + T LE+L L++ + +G+
Sbjct: 370 KITDVSIAYITNSCTNLTSLRMESCTLVPSEAFVLIGQRCQFLEELDLTDNEIDDEGLKS 429
Query: 160 LSSLQNLSVLDLG-GLPVTDLVLRSLQV-LTKLEYLDLWGSQ-VSNRGA-AVLKMFPRLS 215
+S LS L LG L ++D L + + +KL LDL+ S +++ G A+ + P L
Sbjct: 430 ISRCSKLSSLKLGICLNISDEGLSHVGMKCSKLTELDLYRSAGITDLGILAISRGCPGLE 489
Query: 216 FLNLAWT-GVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQ-NLNHLERLNLEQTQ- 272
+N+++ +T +S +C L+ + G L L A+ L +L++++
Sbjct: 490 MINMSYCIDITDSSLLSLSKCSRLNTFESRGCPLITSLGLAAIAVGCKQLIKLDIKKCHN 549
Query: 273 VSDATLFPLSTFKE-LIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD-AVLTNSGLGS 328
+ DA + PL+ F + L ++L +S+TDV L L+S+S L ++++ LT SGL +
Sbjct: 550 IGDAAMLPLAHFSQNLRQITLSYSSVTDVGLLALASISCLQSMTVLHLKGLTPSGLAA 607
>gi|71754651|ref|XP_828240.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70833626|gb|EAN79128.1| hypothetical protein Tb11.53.0001 [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 1399
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 127/314 (40%), Gaps = 65/314 (20%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+ LG YLR LN+ + ++S + L +L + ++D ++ L +I TL
Sbjct: 434 VGCLGTLPYLRVLNIKE-AHISSIGFTGIGASKSLLQLTIESTTGLSD--VEALANILTL 490
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV---------------- 186
EKL L GI L +L L VLDL G LR L V
Sbjct: 491 EKLSLLGCNGIDAGIGCLGNLPQLKVLDLSGTNTDSDSLRGLCVSQTIVSLNLSHCWKVT 550
Query: 187 ----LTKLEYLD---------------------------LWGSQVSNRGAAVLKMFPRLS 215
++ LE L+ L + +++R + L
Sbjct: 551 SVFHISALETLNELNLSDCIRINAGWEALEKLQQLHVAILSNTHITDRDISHFSKCKELV 610
Query: 216 FLNLAWT----GVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 271
L+L++ +T L NI++LE LNL ++ L+ L L L LN++
Sbjct: 611 TLDLSFCDELFDITSLSNITTLEDLNLDNCSKIRK------GLSVLGELPRLRVLNVKGV 664
Query: 272 QVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 330
++++ + L K + L L N L+DV+ LSSLS L L++ SG+G+
Sbjct: 665 HLTNSVIGSLGNGKSFVKLILDNCKGLSDVTF--LSSLSTLKELNLHHCDAVTSGIGTLG 722
Query: 331 PPRSLKLLDLHGGW 344
L++LDL GW
Sbjct: 723 RLLQLRVLDL--GW 734
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 119/284 (41%), Gaps = 61/284 (21%)
Query: 85 YLGAFRYLRSLNVADCRRVTSS------------ALWALTGMT---------C--LKELD 121
++ A L LN++DC R+ + A+ + T +T C L LD
Sbjct: 554 HISALETLNELNLSDCIRINAGWEALEKLQQLHVAILSNTHITDRDISHFSKCKELVTLD 613
Query: 122 LSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVL 181
LS C ++ D + L +I+TLE L L G+++L L L VL++ G+ +T+ V+
Sbjct: 614 LSFCDELFD--ITSLSNITTLEDLNLDNCSKIRKGLSVLGELPRLRVLNVKGVHLTNSVI 671
Query: 182 RSL-----------------------QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN 218
SL L+ L+ L+L G L +L L+
Sbjct: 672 GSLGNGKSFVKLILDNCKGLSDVTFLSSLSTLKELNLHHCDAVTSGIGTLGRLLQLRVLD 731
Query: 219 LAWTGV--TKLPNI----SSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ 272
L WT + L +I S L LNLS +++ S++A+ +LN LE+LN++
Sbjct: 732 LGWTKIDNNSLEDICACSSPLVSLNLSHCKEI-------TSISAIASLNALEKLNIDNCC 784
Query: 273 VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 316
+ T +L L N + D ++ +S L L++
Sbjct: 785 HVTSGWNVFGTLHQLRVAVLSNTRINDENIRHISECKSLNTLNL 828
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 144/317 (45%), Gaps = 38/317 (11%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
L SLN++ C+ +TS + A+ + L++L++ C VT +G ++ L LS T
Sbjct: 752 LVSLNLSHCKEITS--ISAIASLNALEKLNIDNCCHVT-SGWNVFGTLHQLRVAVLSNTR 808
Query: 152 LTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLK 209
+ + I +S ++L+ L+L +TD+ +L +T L L++ W + +G L
Sbjct: 809 INDENIRHISECKSLNTLNLAFCNDITDIT--ALSNITMLRELNIDWCFNIE-KGVEALG 865
Query: 210 MFPRLSFLNLAWTGVT-----KLPN---ISSLECLNL-----SFIQQVGAETDLV----- 251
P+L L+ G + + P SL LNL SF + T +V
Sbjct: 866 KLPKLRELDAKKCGTSVRWMQQYPYNTLFKSLVKLNLENGRESFCVGTLSSTAIVEELLL 925
Query: 252 ------LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQ 304
L + +L L LNL+ +V D L +S K L L++ N + +TD+S
Sbjct: 926 GRACEPYHLPPISSLRRLRVLNLDDGRVCDIWLEGISQSKSLQSLNVSNCNYITDIS--A 983
Query: 305 LSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA-ILQFCKMHPRIEV 363
LSSLS L L++ G +F+ L++ L W+ E +L CK +E+
Sbjct: 984 LSSLSTLEELNVNCCDRIRKGWEAFEALTRLRVATLSVTWVTNEGIRLLSGCKNLRNLEL 1043
Query: 364 W--HELSVICPSDQIGS 378
+ ++S I P + I S
Sbjct: 1044 YCCGDVSNIEPINNIKS 1060
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 71/137 (51%), Gaps = 6/137 (4%)
Query: 82 WMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIST 141
W+ + + L+SLNV++C +T + AL+ ++ L+EL+++ C ++ G + +++
Sbjct: 957 WLEGISQSKSLQSLNVSNCNYITD--ISALSSLSTLEELNVNCCDRIR-KGWEAFEALTR 1013
Query: 142 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLV-LRSLQVLTKLEYLDLWGSQV 200
L LS T +T +GI LLS +NL L+L D+ + + + LE L +
Sbjct: 1014 LRVATLSVTWVTNEGIRLLSGCKNLRNLEL--YCCGDVSNIEPINNIKSLEELTIQNCHN 1071
Query: 201 SNRGAAVLKMFPRLSFL 217
N G + M PRL L
Sbjct: 1072 INEGLLKVGMLPRLRVL 1088
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 107/228 (46%), Gaps = 33/228 (14%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 176
L+ L+LS C+++TD + L + + +++L L+ GI+++ L L VL + + +
Sbjct: 325 LERLNLSHCIQLTD--INPLSNATAIQELNLNRCHRITQGISVVWELPKLRVLHMKDMHL 382
Query: 177 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTG-VTKLPNISSLEC 235
++ LD G+ S +LS N A G +T L + +LE
Sbjct: 383 SE------------SSLDSVGTSES---------LVKLSIENCAGFGDMTLLSSFVALEE 421
Query: 236 LNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 295
LN IQ+ D++ + L L +L LN+++ +S + K L+ L++ +
Sbjct: 422 LN---IQKCA---DIISGVGCLGTLPYLRVLNIKEAHISSIGFTGIGASKSLLQLTIEST 475
Query: 296 S-LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 342
+ L+DV L+++ L LS+ ++G+G LK+LDL G
Sbjct: 476 TGLSDV--EALANILTLEKLSLLGCNGIDAGIGCLGNLPQLKVLDLSG 521
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 4/128 (3%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
E + L G + + W A L A LR LN++ R TS + ++ L L+L C
Sbjct: 1204 EELNLSGCYHIISGWEA-LTALPRLRVLNLSSTRVTTSYGGYYISRCKSLITLNLESC-D 1261
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
+TDA L I TLE+L + + G + L +L L +L+L +TD LR +Q+
Sbjct: 1262 MTDASC--LADIKTLEELHIGKCEELTRGFSALFTLPQLRILNLMDSLITDEDLREIQLS 1319
Query: 188 TKLEYLDL 195
+E L+L
Sbjct: 1320 HTIEDLNL 1327
>gi|332868074|ref|XP_001157861.2| PREDICTED: F-box/LRR-repeat protein 13 isoform 1 [Pan troglodytes]
gi|397466183|ref|XP_003804847.1| PREDICTED: F-box/LRR-repeat protein 13 isoform 4 [Pan paniscus]
Length = 684
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 133/281 (47%), Gaps = 21/281 (7%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLK--ELDLSRCVKVTDAGMKHLL-SISTLEK 144
F L++L++A CRR T L L G C K LDLS C +++ G +++ S + +
Sbjct: 385 FHNLQNLSLAYCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYISNSCTGIMH 444
Query: 145 LWLSETGLTADGI--ALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQ-V 200
L +++ D AL+ ++ L G P ++D R+L KL + G++ V
Sbjct: 445 LTINDMPTLTDNCVKALVEKCSRITSLVFTGAPHISDCTFRALSA-CKLRKIRFEGNKRV 503
Query: 201 SNRGAAVL-KMFPRLSFLNLA-WTGVT-----KLPNISSLECLNLSFIQQVGAETDLVLS 253
++ + K +P LS + +A G+T L + L LNL+ ++G + L
Sbjct: 504 TDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIG-DMGLKQF 562
Query: 254 LTALQNLNHLERLNLEQ-TQVSDATLFPLST-FKELIHLSLRNAS-LTDVSLHQLSSLSK 310
L ++ + LNL ++SDA++ LS L +LSLRN LT + + ++
Sbjct: 563 LDGPASIK-IRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNIFS 621
Query: 311 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 351
L ++ + ++N GL + LK L + + +T+D I
Sbjct: 622 LVSIDLSGTDISNEGLNVLSRHKKLKELSVSECYRITDDGI 662
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 121/256 (47%), Gaps = 48/256 (18%)
Query: 117 LKELDLSRCVKVTDAGMKHLL-SISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 171
L+EL++S C TD M+H+ + L LS T +T + LL +LQNLS+
Sbjct: 337 LQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQNLSLAYC 396
Query: 172 GGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWTGVTKL 227
TD L+ L + KL YLDL G +Q+S +G +++ + TG+ L
Sbjct: 397 RRF--TDKGLQYLNLGNGCHKLIYLDLSGCTQISVQG---------FRYISNSCTGIMHL 445
Query: 228 -----PNISSLECLNLSFIQQVGAETDLVLS------------LTALQNLNHLERLNLE- 269
P ++ C+ + +++ T LV + L+A + L ++ E
Sbjct: 446 TINDMPTLTD-NCVK-ALVEKCSRITSLVFTGAPHISDCTFRALSACK----LRKIRFEG 499
Query: 270 QTQVSDATL-FPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGL 326
+V+DA+ F + L H+ + + +TD SL LS L +LT L++ + V + + GL
Sbjct: 500 NKRVTDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGL 559
Query: 327 GSF-KPPRSLKLLDLH 341
F P S+K+ +L+
Sbjct: 560 KQFLDGPASIKIRELN 575
>gi|198429321|ref|XP_002131798.1| PREDICTED: similar to F-box and leucine-rich repeat protein 20
[Ciona intestinalis]
Length = 477
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 159/369 (43%), Gaps = 66/369 (17%)
Query: 68 EAIELRG-ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC--LKELDLSR 124
+ + L+G EN D + R L LN+ +C+++T L +L G C L LD S
Sbjct: 131 KQLSLKGCENVEDKTLRVFSQNCRNLDRLNLYNCKKITDQTLISL-GKNCPQLHYLDTSS 189
Query: 125 CVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL 184
C ++TD G+KHL +G LLS L ++S D +TD +R L
Sbjct: 190 CTQITDQGLKHL-----------------GEGCPLLSHL-DISWCD----RITDRGIRHL 227
Query: 185 -QVLTKLEYLDLWGSQ--VSNRGAAVLKMFPRLSFL------NLAWTGVTKL----PNIS 231
KL++L + G N + K P L L N+ G+ KL N+
Sbjct: 228 TNGCPKLKHLLVKGVTRLTDNSLENIAKNCPCLLLLNLHKCGNITDEGIQKLTEGCKNLE 287
Query: 232 SL---ECLNL--SFIQQVGA--------ETDLVLSLTAL------QNLNHLERLNLEQT- 271
SL ECLNL +Q + E L +LT ++ LER++LE+
Sbjct: 288 SLNLSECLNLQDESLQSLSLHCHKLKTLEVALCSNLTDTGFISLAKSCPDLERMDLEECV 347
Query: 272 QVSDATLFPLSTFK-ELIHLSLRNASL-TDVSLHQLSSLS----KLTNLSIRDA-VLTNS 324
QVSD TL LS +L L+L + L TD + L S S L L + + ++T++
Sbjct: 348 QVSDKTLRYLSIHCIKLTELTLSHCELITDEGIQDLGSGSCASEHLEVLELDNCPLITDN 407
Query: 325 GLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPS 384
L ++L L+L+ L+T I + P +EV + P+ I +N S
Sbjct: 408 SLEHLVGCQNLSRLELYDCQLITRAGINKLKATFPDLEVHAYFAPNSPAPSINNNNRSGR 467
Query: 385 RTSLRASLV 393
R R ++
Sbjct: 468 RKYCRCCIL 476
>gi|195635861|gb|ACG37399.1| Leucine Rich Repeat family protein [Zea mays]
Length = 349
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 67/136 (49%), Gaps = 26/136 (19%)
Query: 90 RYLRSLNVADCRRVTSSALWAL-TGMTCLKELDLSRCVKVTDAGMKH-LLSISTLEKLWL 147
++L LN++ C+ +T + + LK L+++RCVK+TD G+ LL S+LE L
Sbjct: 159 KHLVHLNLSGCKNITDKGMQLIANNYQGLKTLNITRCVKLTDDGLNQVLLKCSSLESL-- 216
Query: 148 SETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAA 206
NL L TD V R + L+ L +LDL G+Q +++ G A
Sbjct: 217 -----------------NLFALS----SFTDSVYREIGSLSNLTFLDLCGAQNLTDDGLA 255
Query: 207 VLKMFPRLSFLNLAWT 222
+ RL++LNL W
Sbjct: 256 CISRCGRLTYLNLTWC 271
>gi|290988666|ref|XP_002677018.1| LRR_RI domain-containing protein [Naegleria gruberi]
gi|284090623|gb|EFC44274.1| LRR_RI domain-containing protein [Naegleria gruberi]
Length = 480
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 106/220 (48%), Gaps = 26/220 (11%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLS-- 123
N E++ L + V E + +YL+SL + C ++S A + L + L +LD+S
Sbjct: 228 NLESLTLTQMSEVTDECFKFFSNLKYLKSLKIQSCN-LSSEACYHLNSLKKLTKLDMSDN 286
Query: 124 --------------RCVKVTD-----AGMKHLLSISTLEKLWLSETGLTADGIALLSSLQ 164
R +K+ D G + ++ ++ KL+L+ ++ +G+ +S +
Sbjct: 287 IIDQLSFINGMKEIRSLKLMDNRLGNEGCLFVSALPSITKLFLTGNEISNEGLLHISQMT 346
Query: 165 NLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV 224
NL+ LDLG +T + L + + LTKL+ L ++ +++S A V K+ L LN + +
Sbjct: 347 NLTDLDLGNNKITSIELIT-ENLTKLQKLGIYVNRIS--SADVSKLVD-LRELNFSHNKL 402
Query: 225 TKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLE 264
T L +++L+ L F+ T L S + L +LE
Sbjct: 403 TSLKGLNNLKHLQNLFLYGNKLATKLFTSESHFPKLEYLE 442
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 105/224 (46%), Gaps = 23/224 (10%)
Query: 125 CVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDL-VLRS 183
C+K M++L SI +++L E T L L NL + G V + ++R+
Sbjct: 98 CIKYLGKYMRNLESIHVVKRL---EPNATILQCQCLEGLDNLKEIVFKGSQVVNAKLMRN 154
Query: 184 LQVLTKLE--YL---DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNIS-SLECLN 237
+ L ++E YL + W + VS V+ ++ F +W + + NI SL+ L
Sbjct: 155 CKSLKRIEIRYLKNNEFWENIVSPLEEFVI-FNVKMGFN--SWKVL--VCNIKKSLKVL- 208
Query: 238 LSFIQQVGAETDLVLSLTALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNAS 296
++G T L + +LE L L Q ++V+D S K L L +++ +
Sbjct: 209 -----KIGKCTFTKLEYDEMSEFQNLESLTLTQMSEVTDECFKFFSNLKYLKSLKIQSCN 263
Query: 297 LTDVSLHQLSSLSKLTNLSIRDAVLTN-SGLGSFKPPRSLKLLD 339
L+ + + L+SL KLT L + D ++ S + K RSLKL+D
Sbjct: 264 LSSEACYHLNSLKKLTKLDMSDNIIDQLSFINGMKEIRSLKLMD 307
>gi|223698613|gb|ACN18982.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 117/222 (52%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+ L++L +VTD +K L +++TLE+L +S
Sbjct: 76 KNLTNLNRLELSSNTISDISALSGLISLQQLSFGN--QVTD--LKPLANLTTLERLDISS 131
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 132 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 185
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++ + + +++ L L L L L
Sbjct: 186 SLTNLTDLDLANNQISNLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELN 240
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 241 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 278
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 50 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLISLQQLS 107
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 108 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 158
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 159 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 202
>gi|386052545|ref|YP_005970103.1| internalin E [Listeria monocytogenes Finland 1998]
gi|346645196|gb|AEO37821.1| internalin E [Listeria monocytogenes Finland 1998]
gi|441469815|emb|CCQ19570.1| Internalin-A [Listeria monocytogenes]
gi|441472952|emb|CCQ22706.1| Internalin-A [Listeria monocytogenes N53-1]
Length = 499
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 106/229 (46%), Gaps = 21/229 (9%)
Query: 156 GIALLSSLQ---NLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMF 211
GI + LQ NLS L+L VTDL L LTK+ L L G+ + + A A LK
Sbjct: 85 GITTIEGLQYLTNLSELELIDNQVTDL--NPLTNLTKITELRLSGNPLKDVSALAGLKNL 142
Query: 212 PRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 271
+ + T VT L +S+L+ LNL Q + +T L L++L+ L+ T
Sbjct: 143 KTMDLIYTDITDVTPLAGLSNLQVLNLDINQ--------ITDITPLAGLSNLQFLSFGST 194
Query: 272 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP 331
QVSD T PL+ +L L+ N+ ++DVS L+ LS LT + + + + S +
Sbjct: 195 QVSDLT--PLANLSKLTTLNAMNSKVSDVS--PLTGLSNLTEVYLEENQI--SDVSPLAK 248
Query: 332 PRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNG 380
+L ++ L + + Q + P + +I P D I NG
Sbjct: 249 LPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAP-DTISDNG 296
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 22/197 (11%)
Query: 106 SALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQN 165
+ + L +T L EL+L +VTD + L +++ + +L LS G ++ L+ L+N
Sbjct: 87 TTIEGLQYLTNLSELELIDN-QVTD--LNPLTNLTKITELRLS--GNPLKDVSALAGLKN 141
Query: 166 LSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV- 224
L +DL +TD+ L L+ L+ L+L +Q+++ L L FL+ T V
Sbjct: 142 LKTMDLIYTDITDVT--PLAGLSNLQVLNLDINQITD--ITPLAGLSNLQFLSFGSTQVS 197
Query: 225 --TKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 282
T L N+S L LN A V ++ L L++L + LE+ Q+SD + PL+
Sbjct: 198 DLTPLANLSKLTTLN--------AMNSKVSDVSPLTGLSNLTEVYLEENQISDVS--PLA 247
Query: 283 TFKELIHLSLRNASLTD 299
L ++L N ++T+
Sbjct: 248 KLPNLSIVTLTNQTITN 264
>gi|428770073|ref|YP_007161863.1| hypothetical protein Cyan10605_1716 [Cyanobacterium aponinum PCC
10605]
gi|428684352|gb|AFZ53819.1| leucine-rich repeat-containing protein [Cyanobacterium aponinum PCC
10605]
Length = 279
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 106/236 (44%), Gaps = 27/236 (11%)
Query: 77 SVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHL 136
S+ AE + A ++LNV +C A T + + + ++ L
Sbjct: 42 SLSAETEKTINAIT--KALNVKNCAEAAEIAPRVFTLTIANQNI----------SDLRPL 89
Query: 137 LSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLV-LRSLQVLTKLEYLDL 195
S L L L + I+ L S+ NL + LG P+ DL L+SL L KL
Sbjct: 90 KSFINLTDLNLYNNNIV--DISPLQSMTNLKKVVLGHNPIQDLTPLKSLNNLEKL----- 142
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLT 255
+ S ++ +K +++ L + K+ ++ LE NL+ +Q++ A + + L
Sbjct: 143 YISNINTNNFEAIKYLKKINTL---YINQNKISDLKPLE--NLTNLQELYARENKISDLK 197
Query: 256 ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
L NL +L+ L+L+ Q+SD T PL+ +L LSL N +T+ + L L L
Sbjct: 198 PLANLTNLQELSLDNNQISDLT--PLAKLSKLEELSLNNNQVTEAGIKPLWDLKNL 251
>gi|300691489|ref|YP_003752484.1| type III effector protein [Ralstonia solanacearum PSI07]
gi|299078549|emb|CBJ51205.2| leucine-rich-repeat type III effector protein (GALA5) [Ralstonia
solanacearum PSI07]
Length = 533
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 107/267 (40%), Gaps = 27/267 (10%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
EN + E L L +LNV + R+ AL L LD+ + D G++
Sbjct: 245 ENGIGDEGACALATNTKLTTLNV-NRNRIGVEGAKALAAGEALTSLDIG-GNDIGDEGVR 302
Query: 135 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 194
L + + L L + T + ADG+ L++ + L+ L + + D R+L T L L
Sbjct: 303 ALAANARLTTLNVERTRVGADGVGALAASKTLTSLRIDSNNIGDAGARALATNTSLTTLH 362
Query: 195 LWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSL 254
+ + +S GA L L+ LNL + G+ + Q A T L+
Sbjct: 363 IESNGISPAGAQALAANTTLTTLNLGYNGIGD------------AGAQAWSANTTLI--- 407
Query: 255 TALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 314
L++ + +SDA L+ K + L + ++ D L++ LT L
Sbjct: 408 ----------SLSVRRNGLSDAGATILAASKTMTTLDAGDNTIRDAGARALAANRTLTTL 457
Query: 315 SIRDAVLTNSGLGSFKPPRSLKLLDLH 341
+R + N+G + L LDL
Sbjct: 458 DVRSNEIENAGARALAANTWLASLDLR 484
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 119/311 (38%), Gaps = 50/311 (16%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
+ A +A+L +R LNV D +R+ L L LD+S ++ G + L
Sbjct: 153 ITAAGIAHLSHLPLVR-LNVRD-QRIGVEGARLLANHPTLTSLDVSNG-RIGPEGARALA 209
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY----- 192
+ L L +S + A+G L++ + L+ LD+ + D +L TKL
Sbjct: 210 DNTRLTTLSVSHNRIGAEGAKALAASETLTSLDISENGIGDEGACALATNTKLTTLNVNR 269
Query: 193 -------------------LDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLP 228
LD+ G+ + + G L RL+ LN+ T GV L
Sbjct: 270 NRIGVEGAKALAAGEALTSLDIGGNDIGDEGVRALAANARLTTLNVERTRVGADGVGALA 329
Query: 229 NISSLECLNL--SFIQQVGAE---TDLVLSL-------------TALQNLNHLERLNLEQ 270
+L L + + I GA T+ L+ AL L LNL
Sbjct: 330 ASKTLTSLRIDSNNIGDAGARALATNTSLTTLHIESNGISPAGAQALAANTTLTTLNLGY 389
Query: 271 TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 330
+ DA S LI LS+R L+D L++ +T L D + ++G +
Sbjct: 390 NGIGDAGAQAWSANTTLISLSVRRNGLSDAGATILAASKTMTTLDAGDNTIRDAGARALA 449
Query: 331 PPRSLKLLDLH 341
R+L LD+
Sbjct: 450 ANRTLTTLDVR 460
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 65/143 (45%), Gaps = 6/143 (4%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
++ + AL T L L+L + DAG + + +TL L + GL+ G +L++
Sbjct: 368 ISPAGAQALAANTTLTTLNLGYN-GIGDAGAQAWSANTTLISLSVRRNGLSDAGATILAA 426
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL--- 219
+ ++ LD G + D R+L L LD+ +++ N GA L L+ L+L
Sbjct: 427 SKTMTTLDAGDNTIRDAGARALAANRTLTTLDVRSNEIENAGARALAANTWLASLDLRNN 486
Query: 220 --AWTGVTKLPNISSLECLNLSF 240
GV L +L L +SF
Sbjct: 487 RVTEAGVRALLANRTLSSLGVSF 509
>gi|255017074|ref|ZP_05289200.1| internalin E [Listeria monocytogenes FSL F2-515]
Length = 474
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 106/229 (46%), Gaps = 21/229 (9%)
Query: 156 GIALLSSLQ---NLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMF 211
GI + LQ NLS L+L VTDL L LTK+ L L G+ + + A A LK
Sbjct: 60 GITTIEGLQYLTNLSELELIDNQVTDL--NPLTNLTKITELRLSGNPLKDVSALAGLKNL 117
Query: 212 PRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 271
+ + T VT L +S+L+ LNL Q + +T L L++L+ L+ T
Sbjct: 118 KTMDLIYTDITDVTPLAGLSNLQVLNLDINQ--------ITDITPLAGLSNLQFLSFGST 169
Query: 272 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP 331
QVSD T PL+ +L L+ N+ ++DVS L+ LS LT + + + + S +
Sbjct: 170 QVSDLT--PLANLSKLTTLNAMNSKVSDVS--PLTGLSNLTEVYLEENQI--SDVSPLAK 223
Query: 332 PRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNG 380
+L ++ L + + Q + P + +I P D I NG
Sbjct: 224 LPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAP-DTISDNG 271
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 22/197 (11%)
Query: 106 SALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQN 165
+ + L +T L EL+L +VTD + L +++ + +L LS G ++ L+ L+N
Sbjct: 62 TTIEGLQYLTNLSELELIDN-QVTD--LNPLTNLTKITELRLS--GNPLKDVSALAGLKN 116
Query: 166 LSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV- 224
L +DL +TD+ L L+ L+ L+L +Q+++ L L FL+ T V
Sbjct: 117 LKTMDLIYTDITDVT--PLAGLSNLQVLNLDINQITD--ITPLAGLSNLQFLSFGSTQVS 172
Query: 225 --TKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 282
T L N+S L LN A V ++ L L++L + LE+ Q+SD + PL+
Sbjct: 173 DLTPLANLSKLTTLN--------AMNSKVSDVSPLTGLSNLTEVYLEENQISDVS--PLA 222
Query: 283 TFKELIHLSLRNASLTD 299
L ++L N ++T+
Sbjct: 223 KLPNLSIVTLTNQTITN 239
>gi|157118403|ref|XP_001659098.1| F-Box protein, putative [Aedes aegypti]
gi|108875753|gb|EAT39978.1| AAEL008262-PA, partial [Aedes aegypti]
Length = 381
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 75/141 (53%), Gaps = 18/141 (12%)
Query: 92 LRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWL--- 147
L L + DC+R++ AL + G+T LK ++LS CV VTD+G+KHL ++ LE+L L
Sbjct: 215 LEYLGLQDCQRLSDEALRHIAQGLTSLKSINLSFCVSVTDSGLKHLAKMTKLEELNLRAC 274
Query: 148 ---SETG---LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL-QVLTKLEYLDLWGSQV 200
S+ G LT G A++S ++S D + D L + Q L L+ L L Q+
Sbjct: 275 DNISDIGMAYLTEGGSAIIS--LDVSFCD----KIADQALTHISQGLFHLKSLSLSACQI 328
Query: 201 SNRG-AAVLKMFPRLSFLNLA 220
++ G A + K L LN+
Sbjct: 329 TDEGLAKIAKSLHDLETLNIG 349
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 124/254 (48%), Gaps = 37/254 (14%)
Query: 90 RYLRSLNVADCRRVTSSALWAL--TGMTCLKELDLSRCVKVTDAGM----KHLLSISTLE 143
R ++ + + C +T +L + T + L+ LDLS C +VTD+ + +HL ++ LE
Sbjct: 132 RGIKKVQILGCYNITDISLGYVFSTDLLNLRTLDLSLCKQVTDSSLGRIAQHLKNVEILE 191
Query: 144 KLWLSE----TGL---TADGIALLSSLQNLSVLDLGGLPVTDLVLRSL-QVLTKLEYLDL 195
S GL TADG +L+ L + D L +D LR + Q LT L+ ++L
Sbjct: 192 LGGCSNITNTAGLSKETADGTP---ALEYLGLQDCQRL--SDEALRHIAQGLTSLKSINL 246
Query: 196 -WGSQVSNRGAAVLKMFPRLSFLNL-AWTGVTKL------PNISSLECLNLSFIQQVGAE 247
+ V++ G L +L LNL A ++ + S++ L++SF ++ +
Sbjct: 247 SFCVSVTDSGLKHLAKMTKLEELNLRACDNISDIGMAYLTEGGSAIISLDVSFCDKIADQ 306
Query: 248 TDLVLSLTAL-QNLNHLERLNLEQTQVSDATLFPLS-TFKELIHLSL-RNASLTDVSLHQ 304
+LT + Q L HL+ L+L Q++D L ++ + +L L++ + A +TD L
Sbjct: 307 -----ALTHISQGLFHLKSLSLSACQITDEGLAKIAKSLHDLETLNIGQCARVTDKGLEY 361
Query: 305 LSSLSKLTNLSIRD 318
L+ +L NL D
Sbjct: 362 LA--DELNNLRAID 373
>gi|26330053|dbj|BAC28765.1| unnamed protein product [Mus musculus]
Length = 583
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 105/240 (43%), Gaps = 18/240 (7%)
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
VT + L + L+ L+LS +T+ + L L+ L L P+T + +S L
Sbjct: 156 VTHISRRAFLGLHNLQILYLSHNCITSLRPGIFKDLHQLAWLILDDNPITRISQKSFMGL 215
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFI----QQ 243
L +L + G+++ + P+L++++LA G+ + N + L C +L+ + Q
Sbjct: 216 NSLFFLSMVGNRLEALPETLCAQMPQLNWVDLANNGIKYITNSTFLTCDSLTVLFLPRNQ 275
Query: 244 VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLH 303
+G + S +L +L L+L ++ + S L L+L + L V +
Sbjct: 276 IGFVPEKTFS-----SLKNLGELDLSSNMITKLPVHLFSDLHLLQKLNLSSNPLLYVHKN 330
Query: 304 QLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEV 363
Q SL +L +L + + N G F+P ++L + L ++C P + +
Sbjct: 331 QFGSLKQLQSLDLERIEIPNISTGMFQPMKNLSHIYL---------KTFRYCSYVPHVRI 381
>gi|18378037|emb|CAD21749.1| hypothetical leucine-rich repeat protein 1, LRRP1 [Trypanosoma
brucei]
Length = 1394
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 117/278 (42%), Gaps = 62/278 (22%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 176
L +L +S C +TDA + + LE+L L+ GI L L L +LDL G+PV
Sbjct: 250 LSKLSVSECNNITDA--TPISQLEALEELNLNSCYHITKGIGTLGMLLRLRILDLSGVPV 307
Query: 177 TDLVLR------SLQVL-----------------TKLEYLDLWGSQVSNRGAAVLKMFPR 213
D L+ SL+ L T E L+L G + RG V+ P+
Sbjct: 308 EDNCLKGLCDCGSLERLNISYCIQLKDINPLSNATATEELNLNGCRRITRGIGVVWALPK 367
Query: 214 LSFLNL----------------------------AWTGVTKLPNISSLECLNLSFIQQVG 245
L L++ + +T L +I +LE LN IQ+
Sbjct: 368 LRVLHMKDVHLSEPSLDSVGTGGPLVKVSLDNCAGFGDMTLLSSIVTLEELN---IQKCA 424
Query: 246 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS-LHQ 304
D++ + L L +L LN+++ +S + K L+ L++ S+T +S +
Sbjct: 425 ---DIISGVGCLGTLPYLRVLNIKEAHISSLDFTGIGASKSLLQLNME--SITGLSNVEA 479
Query: 305 LSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 342
L+++ L LS+ ++G+G LK+LDL G
Sbjct: 480 LANILTLEKLSLHGCTDIDAGIGCLGNLPQLKMLDLSG 517
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 111/285 (38%), Gaps = 42/285 (14%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+ LG YLR LN+ + ++S + L +L++ +++ ++ L +I TL
Sbjct: 430 VGCLGTLPYLRVLNIKE-AHISSLDFTGIGASKSLLQLNMESITGLSN--VEALANILTL 486
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL---QVLTKLEYLDLWG-- 197
EKL L GI L +L L +LDL G + LRSL Q + L W
Sbjct: 487 EKLSLHGCTDIDAGIGCLGNLPQLKMLDLSGTNTDNESLRSLCLSQTMVSLNLSHCWKMT 546
Query: 198 --SQVSNRGAAVLKMFPRLSFLNLAWTGVTKL---------------------PNISSLE 234
S +S+ A +N W + KL N +L
Sbjct: 547 NVSHISSLEALNELNLSNCFGINAGWEAIEKLQQLHVAILPNTHITDRDISHFSNCKNLV 606
Query: 235 CLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 294
L+LSF + +L +T L N+ LE LNL+ L L L L+++
Sbjct: 607 TLDLSFCNK-------LLDVTTLSNITTLEDLNLDNCSNIRKGLSVLGELPRLCVLNIKG 659
Query: 295 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 339
L D + L + + LS+ + G G KP +L L+
Sbjct: 660 VHLKDSVIGSLGNGNSFVKLSLENC----KGFGDVKPLSNLVTLE 700
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 112/264 (42%), Gaps = 51/264 (19%)
Query: 124 RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRS 183
R + + +HL +I TLEKL +++T + I +S L NL LDL + D +R
Sbjct: 185 RSNNIDNNDARHLFNIGTLEKLAITDT-MQLTNIRGISRLTNLMCLDLNSTNIDDSCVRR 243
Query: 184 LQVLTK-----------------------LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA 220
+ K LE L+L +G L M RL L+L+
Sbjct: 244 ICACVKLSKLSVSECNNITDATPISQLEALEELNLNSCYHITKGIGTLGMLLRLRILDLS 303
Query: 221 WTGVTK-----LPNISSLECLNLSFIQQVGAETDLVLSLTALQNLN-------------- 261
V L + SLE LN+S+ Q+ + + + + TA + LN
Sbjct: 304 GVPVEDNCLKGLCDCGSLERLNISYCIQL-KDINPLSNATATEELNLNGCRRITRGIGVV 362
Query: 262 ----HLERLNLEQTQVSDATLFPLSTFKELIHLSLRN-ASLTDVSLHQLSSLSKLTNLSI 316
L L+++ +S+ +L + T L+ +SL N A D++L LSS+ L L+I
Sbjct: 363 WALPKLRVLHMKDVHLSEPSLDSVGTGGPLVKVSLDNCAGFGDMTL--LSSIVTLEELNI 420
Query: 317 RDAVLTNSGLGSFKPPRSLKLLDL 340
+ SG+G L++L++
Sbjct: 421 QKCADIISGVGCLGTLPYLRVLNI 444
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 123/273 (45%), Gaps = 34/273 (12%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
++ + + + LR LN++ C+ VT + L+ ++ L++L++ +C G + L
Sbjct: 949 INGDVTKNISESKSLRLLNLSHCKWVTD--ISVLSSLSTLEKLNV-KCCNGIRKGWESLG 1005
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDLW 196
+ L LS+T +TA IA LSS + L L ++D+ + + + LE L +
Sbjct: 1006 KLPLLRVAILSDTNITAKDIACLSSCKTLVKLKFFRCEKLSDVTV--VYKIQSLEELMVR 1063
Query: 197 GSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTA 256
+G L PRL FL+L K +IS ++ +G LV
Sbjct: 1064 SCSDGLKGLNALGTLPRLRFLHLRNL---KGSDIS---------VESIGTSKSLV----- 1106
Query: 257 LQNLNHLERLNLE-QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLS 315
RLN+E + ++++AT PLS L LSLR+ + L L +L +L
Sbjct: 1107 --------RLNIEMREELTNAT--PLSNITSLEELSLRDCGDNLEGVGTLGKLPRLKSLD 1156
Query: 316 IRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 348
+ + +++ L RS+ L+L W LT+
Sbjct: 1157 LGLSRISDDTLDDICLSRSITSLNLASSWKLTD 1189
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 112/274 (40%), Gaps = 33/274 (12%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
E + L G +DA + LG L+ L+++ + +L +L + L+LS C K
Sbjct: 487 EKLSLHGCTDIDA-GIGCLGNLPQLKMLDLSG-TNTDNESLRSLCLSQTMVSLNLSHCWK 544
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
+T+ + H+ S+ L +L LS G + LQ L V L +TD +
Sbjct: 545 MTN--VSHISSLEALNELNLSNCFGINAGWEAIEKLQQLHVAILPNTHITDRDISHFSNC 602
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAE 247
L LDL SF N VT L NI++LE LNL +
Sbjct: 603 KNLVTLDL-------------------SFCN-KLLDVTTLSNITTLEDLNLDNCSNIRK- 641
Query: 248 TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLS 306
L+ L L L LN++ + D+ + L + LSL N DV LS
Sbjct: 642 -----GLSVLGELPRLCVLNIKGVHLKDSVIGSLGNGNSFVKLSLENCKGFGDV--KPLS 694
Query: 307 SLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
+L L L++ SG+G+ L++LDL
Sbjct: 695 NLVTLEELNLHYCDKVTSGMGTLGRLLQLRVLDL 728
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 35/218 (16%)
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
L +I++LE+L L + G +G+ L L L LDLG ++D L + + + L+L
Sbjct: 1122 LSNITSLEELSLRDCGDNLEGVGTLGKLPRLKSLDLGLSRISDDTLDDICLSRSITSLNL 1181
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAW--TGVTKLPNISSLECLNLSFIQQVGAETDLVLS 253
S W T ++ + N+++LE +NLS + +
Sbjct: 1182 ASS----------------------WKLTDISHISNLTALEEMNLSGCYPINS------G 1213
Query: 254 LTALQNLNHLERLNLEQTQVSD-ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 312
AL L L +NLE V+ + +S K L+ L+++ + +TD S ++++ L
Sbjct: 1214 WKALSELPRLRVVNLESASVTTRYDGYYISRCKYLVTLNIQLSDMTDAS--YIANIKTLE 1271
Query: 313 NLSIRDAVLTNSGLGS-FKPPRSLKLLDLHGGWLLTED 349
L I + G + F PR L++LDL + ED
Sbjct: 1272 ELRIGKSKELTQGFSALFTLPR-LRILDLFMSRITDED 1308
>gi|357511815|ref|XP_003626196.1| F-box/LRR-repeat protein [Medicago truncatula]
gi|355501211|gb|AES82414.1| F-box/LRR-repeat protein [Medicago truncatula]
Length = 623
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 119/252 (47%), Gaps = 20/252 (7%)
Query: 83 MAYLG------AFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHL 136
+ Y+G A L +++V+ C AL+ LKE+++ +C+ VTD G+ +
Sbjct: 146 LGYVGLEMLIKACPLLEAVDVSHCWGFGDREAAALSCGGKLKEINMDKCLGVTDIGLAKI 205
Query: 137 -LSISTLEKLWLSETGLTAD-GIALLS-SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
+ S LEKL L +D GI LLS +L+ LD+ L VT+ LRS+ L KLE
Sbjct: 206 AVGCSKLEKLSLKWCLEISDLGIDLLSKKCFDLNFLDVSYLKVTNESLRSIASLLKLEVF 265
Query: 194 DLWGSQ-VSNRGAAVL-KMFPRLSFLNLAWTGVTK----LPNISSLECLNLSFIQQVGAE 247
+ G V + G L K P L ++++ L IS E L I
Sbjct: 266 IMVGCYLVDDAGLQFLEKGCPLLKAIDVSRCNCVSPSGLLSVISGHE--GLEQINAGHCL 323
Query: 248 TDLVLSLT-ALQNLNHLERLNLEQTQVSDATLFPL-STFKELIHLSL-RNASLTDVSLHQ 304
++L LT L+NL HL + ++ +VSD L + S K L+ L L + +T++ + Q
Sbjct: 324 SELSAPLTNGLKNLKHLSVIRIDGVRVSDFILQIIGSNCKSLVELGLSKCIGVTNMGIMQ 383
Query: 305 LSSLSKLTNLSI 316
+ LT L +
Sbjct: 384 VVGCCNLTTLDL 395
>gi|194376748|dbj|BAG57520.1| unnamed protein product [Homo sapiens]
Length = 348
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 153/321 (47%), Gaps = 25/321 (7%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTC-LKELDLSRCVKVTDAGMKHLL-SISTLEKLWL 147
R + LN+ C ++T S ++L+ LK LDL+ CV +T++ +K + LE L L
Sbjct: 29 RNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSITNSSLKGISEGCRNLEYLNL 88
Query: 148 S-ETGLTADGI-ALLSSLQNLSVLDLGGLP-VTDLVLRSLQ-VLTKLEYLDLWG-SQVSN 202
S +T DGI AL+ + L L L G + D L+ +Q +L L+L S++++
Sbjct: 89 SWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKHIQNYCHELVSLNLQSCSRITD 148
Query: 203 RGAA-VLKMFPRLSFLNLAWTGVTKLPNIS----SLECLNLSFIQQVGAE--TDLVLSLT 255
G + + RL L L +G + L + S L C L ++ TD +L
Sbjct: 149 EGVVQICRGCHRLQALCL--SGCSNLTDASLTALGLNCPRLQILEAARCSHLTDAGFTLL 206
Query: 256 ALQNLNHLERLNLEQTQ-VSDATLFPLSTF-KELIHLSLRNASL-TDVSLHQLSSLS--- 309
A +N + LE+++LE+ ++D+TL LS +L LSL + L TD + LS+ +
Sbjct: 207 A-RNCHELEKMDLEECILITDSTLIQLSIHCPKLQALSLSHCELITDDGILHLSNSTCGH 265
Query: 310 -KLTNLSIRDAVL-TNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHEL 367
+L L + + +L T+ L + R L+ L+L+ +T I + P ++V
Sbjct: 266 ERLRVLELDNCLLITDVALEHLENCRGLERLELYDCQQVTRAGIKRMRAQLPHVKVHAYF 325
Query: 368 SVICPSDQIGSNGPSPSRTSL 388
+ + P + +G R +
Sbjct: 326 APVTPPTAVAGSGQRLCRCCV 346
>gi|83629907|gb|ABC26615.1| internalin E [Listeria monocytogenes]
gi|83629941|gb|ABC26632.1| internalin E [Listeria monocytogenes]
gi|83629951|gb|ABC26637.1| internalin E [Listeria monocytogenes]
gi|83629955|gb|ABC26639.1| internalin E [Listeria monocytogenes]
gi|83629957|gb|ABC26640.1| internalin E [Listeria monocytogenes]
Length = 498
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 106/229 (46%), Gaps = 21/229 (9%)
Query: 156 GIALLSSLQ---NLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMF 211
GI + LQ NLS L+L VTDL L LTK+ L L G+ + + A A LK
Sbjct: 84 GITTIEGLQYLTNLSELELIDNQVTDL--NPLTNLTKITELRLSGNPLKDVSALAGLKNL 141
Query: 212 PRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 271
+ + T VT L +S+L+ LNL Q + +T L L++L+ L+ T
Sbjct: 142 KTMDLIYTDITDVTPLAGLSNLQVLNLDINQ--------ITDITPLAGLSNLQFLSFGST 193
Query: 272 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP 331
QVSD T PL+ +L L+ N+ ++DVS L+ LS LT + + + + S +
Sbjct: 194 QVSDLT--PLANLSKLTTLNAMNSKVSDVS--PLTGLSNLTEVYLEENQI--SDVSPLAK 247
Query: 332 PRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNG 380
+L ++ L + + Q + P + +I P D I NG
Sbjct: 248 LPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAP-DTISDNG 295
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 22/197 (11%)
Query: 106 SALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQN 165
+ + L +T L EL+L +VTD + L +++ + +L LS G ++ L+ L+N
Sbjct: 86 TTIEGLQYLTNLSELELIDN-QVTD--LNPLTNLTKITELRLS--GNPLKDVSALAGLKN 140
Query: 166 LSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV- 224
L +DL +TD+ L L+ L+ L+L +Q+++ L L FL+ T V
Sbjct: 141 LKTMDLIYTDITDVT--PLAGLSNLQVLNLDINQITD--ITPLAGLSNLQFLSFGSTQVS 196
Query: 225 --TKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 282
T L N+S L LN A V ++ L L++L + LE+ Q+SD + PL+
Sbjct: 197 DLTPLANLSKLTTLN--------AMNSKVSDVSPLTGLSNLTEVYLEENQISDVS--PLA 246
Query: 283 TFKELIHLSLRNASLTD 299
L ++L N ++T+
Sbjct: 247 KLPNLSIVTLTNQTITN 263
>gi|28210241|ref|NP_781185.1| internalin A-like protein/ S-layer protein [Clostridium tetani E88]
gi|28202677|gb|AAO35122.1| internalin A-like protein/putative S-layer protein [Clostridium
tetani E88]
Length = 695
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 125/281 (44%), Gaps = 55/281 (19%)
Query: 98 ADCRRVTSSALW-----ALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGL 152
AD +RVT LW L G+ L +L + K + ++ L S+ LE L+L++T +
Sbjct: 334 ADLQRVTQLDLWDKNVTNLAGIENLIDLRVLNAGKNNISNLEPLKSMDNLENLYLTKTKV 393
Query: 153 TADGIALLSSLQNLSVLDLGGLPVTDLV--------------------LRSLQVLTKLEY 192
+ + L L NL L + V+DL L ++ L LE
Sbjct: 394 VS--LEPLRGLTNLKALVINETNVSDLTPIKNLINLERLTLGDNKLVSLAGIENLVNLES 451
Query: 193 LDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKL---PNISSLE--CLNLSFIQQVGA- 246
LD+ + VSN A ++ L LN+ VT L N+ +LE LN + + +GA
Sbjct: 452 LDINKNNVSN--LASIRDLTNLKSLNINENNVTDLSVVTNLKNLERISLNKNGVTSLGAL 509
Query: 247 -----------ETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 295
+ + + S LQN L+ L L+ Q+SD L L+ L LSLR
Sbjct: 510 AALPELEWVTAKENGLTSTVGLQNALKLKELFLDSNQISD--LSSLANLTSLETLSLRTN 567
Query: 296 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLK 336
+++DVS LS L+++ NL L + +GS P S++
Sbjct: 568 NISDVS--SLSDLTRMKNL-----YLHKNNIGSIAPLASME 601
>gi|404412362|ref|YP_006697949.1| internalin E [Listeria monocytogenes SLCC7179]
gi|404238061|emb|CBY59462.1| internalin E (LPXTG motif) [Listeria monocytogenes SLCC7179]
Length = 499
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 106/229 (46%), Gaps = 21/229 (9%)
Query: 156 GIALLSSLQ---NLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMF 211
GI + LQ NLS L+L VTDL L LTK+ L L G+ + + A A LK
Sbjct: 85 GITTIEGLQYLTNLSELELIDNQVTDL--NPLTNLTKITELRLSGNPLKDVSALAGLKNL 142
Query: 212 PRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 271
+ + T VT L +S+L+ LNL Q + +T L L++L+ L+ T
Sbjct: 143 KTMDLIYTDITDVTPLAGLSNLQVLNLDINQ--------ITDITPLAGLSNLQFLSFGST 194
Query: 272 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP 331
QVSD T PL+ +L L+ N+ ++DVS L+ LS LT + + + + S +
Sbjct: 195 QVSDLT--PLANLSKLTTLNAMNSKVSDVS--PLTGLSNLTEVYLEENQI--SDVSPLAK 248
Query: 332 PRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNG 380
+L ++ L + + Q + P + +I P D I NG
Sbjct: 249 LPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAP-DTISDNG 296
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 22/197 (11%)
Query: 106 SALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQN 165
+ + L +T L EL+L +VTD + L +++ + +L LS G ++ L+ L+N
Sbjct: 87 TTIEGLQYLTNLSELELIDN-QVTD--LNPLTNLTKITELRLS--GNPLKDVSALAGLKN 141
Query: 166 LSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV- 224
L +DL +TD+ L L+ L+ L+L +Q+++ L L FL+ T V
Sbjct: 142 LKTMDLIYTDITDVT--PLAGLSNLQVLNLDINQITD--ITPLAGLSNLQFLSFGSTQVS 197
Query: 225 --TKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 282
T L N+S L LN A V ++ L L++L + LE+ Q+SD + PL+
Sbjct: 198 DLTPLANLSKLTTLN--------AMNSKVSDVSPLTGLSNLTEVYLEENQISDVS--PLA 247
Query: 283 TFKELIHLSLRNASLTD 299
L ++L N ++T+
Sbjct: 248 KLPNLSIVTLTNQTITN 264
>gi|332667985|ref|YP_004450773.1| small GTP-binding protein [Haliscomenobacter hydrossis DSM 1100]
gi|332336799|gb|AEE53900.1| small GTP-binding protein [Haliscomenobacter hydrossis DSM 1100]
Length = 998
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 141/336 (41%), Gaps = 79/336 (23%)
Query: 118 KELDLSRC-VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 176
KELDLSRC +K ++ L+ ++ WLS + + L NL++LDL G +
Sbjct: 18 KELDLSRCDLKELPKELEELVWLT-----WLSCDRNQISDLNPIEKLSNLTMLDLVGNQI 72
Query: 177 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLP------NI 230
+DL ++ L+ L L WG+Q+S+ + L+ L+ + ++ L N+
Sbjct: 73 SDL--NPIEKLSNLTVLICWGNQISD--LTPISKLVNLTELDCGYNQISDLKPIANLNNL 128
Query: 231 SSLEC-----------LNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD---- 275
+SL C NL + ++ ++ + L + NL++L L+ E Q+S+
Sbjct: 129 TSLYCDINQISDLSPIANLRILTKLYCHSNQISDLKPIANLSNLTSLSFENNQISNLKPI 188
Query: 276 --------ATLF-----PLSTFKELIHLS-----------------LRNASLTDVSLHQL 305
T F LS+ K LI LS L N + D S +Q+
Sbjct: 189 ANLSNLTSLTCFLNQINDLSSIKNLIQLSTLSCGGNQISDLTPIANLSNLTSIDCSNNQI 248
Query: 306 SSLSKLTNLS-IRDAVLTNSGLGSFKPPRSL-KLLDLHGGWLLTED--AILQFCKMHPRI 361
S L + NLS + +N+ + KP +L L L+ D IL+F + RI
Sbjct: 249 SDLKPIANLSNLTSLYCSNNQISDLKPIANLSNLTSLYCSNNQISDLKPILEF--IQRRI 306
Query: 362 EV-WHELS-----------VICPSDQIGSNGPSPSR 385
V W + S +ICP +I + P R
Sbjct: 307 PVKWQDYSDSPAILVKNCPLICPPIEIAQHSPEAVR 342
>gi|255028875|ref|ZP_05300826.1| internalin E [Listeria monocytogenes LO28]
gi|284800562|ref|YP_003412427.1| internalin E [Listeria monocytogenes 08-5578]
gi|284993748|ref|YP_003415516.1| internalin E [Listeria monocytogenes 08-5923]
gi|386049193|ref|YP_005967184.1| internalin E [Listeria monocytogenes FSL R2-561]
gi|404282695|ref|YP_006683592.1| internalin E [Listeria monocytogenes SLCC2372]
gi|405757251|ref|YP_006686527.1| internalin E [Listeria monocytogenes SLCC2479]
gi|284056124|gb|ADB67065.1| internalin E [Listeria monocytogenes 08-5578]
gi|284059215|gb|ADB70154.1| internalin E [Listeria monocytogenes 08-5923]
gi|346423039|gb|AEO24564.1| internalin E [Listeria monocytogenes FSL R2-561]
gi|404232197|emb|CBY53600.1| internalin E (LPXTG motif) [Listeria monocytogenes SLCC2372]
gi|404235133|emb|CBY56535.1| internalin E (LPXTG motif) [Listeria monocytogenes SLCC2479]
Length = 499
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 106/229 (46%), Gaps = 21/229 (9%)
Query: 156 GIALLSSLQ---NLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMF 211
GI + LQ NLS L+L VTDL L LTK+ L L G+ + + A A LK
Sbjct: 85 GITTIEGLQYLTNLSELELIDNQVTDL--NPLTNLTKITELRLSGNPLKDVSALAGLKNL 142
Query: 212 PRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 271
+ + T VT L +S+L+ LNL Q + +T L L++L+ L+ T
Sbjct: 143 KTMDLIYTDITDVTPLAGLSNLQVLNLDINQ--------ITDITPLAGLSNLQFLSFGST 194
Query: 272 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP 331
QVSD T PL+ +L L+ N+ ++DVS L+ LS LT + + + + S +
Sbjct: 195 QVSDLT--PLANLSKLTTLNAMNSKVSDVS--PLTGLSNLTEVYLEENQI--SDVSPLAK 248
Query: 332 PRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNG 380
+L ++ L + + Q + P + +I P D I NG
Sbjct: 249 LPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAP-DTISDNG 296
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 22/197 (11%)
Query: 106 SALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQN 165
+ + L +T L EL+L +VTD + L +++ + +L LS G ++ L+ L+N
Sbjct: 87 TTIEGLQYLTNLSELELIDN-QVTD--LNPLTNLTKITELRLS--GNPLKDVSALAGLKN 141
Query: 166 LSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV- 224
L +DL +TD+ L L+ L+ L+L +Q+++ L L FL+ T V
Sbjct: 142 LKTMDLIYTDITDVT--PLAGLSNLQVLNLDINQITD--ITPLAGLSNLQFLSFGSTQVS 197
Query: 225 --TKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 282
T L N+S L LN A V ++ L L++L + LE+ Q+SD + PL+
Sbjct: 198 DLTPLANLSKLTTLN--------AMNSKVSDVSPLTGLSNLTEVYLEENQISDVS--PLA 247
Query: 283 TFKELIHLSLRNASLTD 299
L ++L N ++T+
Sbjct: 248 KLPNLSIVTLTNQTITN 264
>gi|386052609|ref|YP_005970167.1| internalin-I [Listeria monocytogenes Finland 1998]
gi|346645260|gb|AEO37885.1| internalin-I [Listeria monocytogenes Finland 1998]
Length = 1778
Score = 55.1 bits (131), Expect = 7e-05, Method: Composition-based stats.
Identities = 70/305 (22%), Positives = 145/305 (47%), Gaps = 46/305 (15%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
+S E + L L++L ++D +T+ + A+T + LK L L C +T G
Sbjct: 375 DSCAIEDLGTLNNLPKLQTLVLSDNENLTN--ITAITDLPQLKTLTLDGC-GITSIGT-- 429
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
L ++ LEKL L E +T+ I+ ++ L LS LD+ +T + L+ L LE+L++
Sbjct: 430 LDNLPKLEKLDLKENQITS--ISEITDLPRLSYLDVSVNNLT--TIGDLKKLPLLEWLNV 485
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGV------TKLPNISSLECLNLSF--------- 240
+++S+ + L FP L+++N++ + T+LP++ N S
Sbjct: 486 SSNRLSD--VSTLTNFPSLNYINISNNVIRTVGKMTELPSLKEFYAQNNSISDISMIHDM 543
Query: 241 --IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLF----PLSTFKELIHL---- 290
+++V A +L+ ++ NL L+ L++ +++ ++ L TF +L
Sbjct: 544 PNLRKVDASNNLITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLETFNAQTNLITNI 603
Query: 291 ----SLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS------GLGSFKPPRSLKLLDL 340
+L + + ++S +++ SL+ + +L + ++ + LG+ L++LDL
Sbjct: 604 GTMDNLPDLTYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDL 663
Query: 341 HGGWL 345
+L
Sbjct: 664 QNNYL 668
Score = 40.0 bits (92), Expect = 2.4, Method: Composition-based stats.
Identities = 62/258 (24%), Positives = 110/258 (42%), Gaps = 43/258 (16%)
Query: 94 SLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLT 153
SLN + + +T + LKE ++ ++D M H + L K+ S +T
Sbjct: 501 SLNYINISNNVIRTVGKMTELPSLKEF-YAQNNSISDISMIH--DMPNLRKVDASNNLIT 557
Query: 154 ADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQ---VSNRGAAVLKM 210
I +L L LD+ +T S V+ L L+ + +Q ++N G +
Sbjct: 558 --NIGTFDNLPKLQSLDVHSNRIT-----STSVIHDLPSLETFNAQTNLITNIGT--MDN 608
Query: 211 FPRLSFLNLAWTGVTKLPNISSLECL-------NLSFIQQVGAE---------------- 247
P L+++NL++ + L I L L N S+++ +G
Sbjct: 609 LPDLTYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDLQNNYL 668
Query: 248 --TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 305
T +L++L +L +L LNL D + LST LI+L+L + + D+S L
Sbjct: 669 NYTGTEGNLSSLSDLTNLTELNLRNNVYID-DISGLSTLSRLIYLNLDSNKIEDIS--AL 725
Query: 306 SSLSKLTNLSIRDAVLTN 323
S+L+ L L++ + + N
Sbjct: 726 SNLTNLQELTLENNKIEN 743
>gi|294358387|gb|ADE73846.1| InlA [Listeria monocytogenes]
Length = 800
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 119/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+ L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLISLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLISLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 244 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 287
>gi|348513135|ref|XP_003444098.1| PREDICTED: F-box/LRR-repeat protein 20-like [Oreochromis niloticus]
Length = 432
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 156/344 (45%), Gaps = 30/344 (8%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC-LKELDLSRCVK 127
+ LRG SV DA + R + LN+ C ++T S +L+ LK LDL+ CV
Sbjct: 92 LSLRGCLSVGDASMKTFAQNCRNIEVLNLNGCTKITDSTCLSLSKFCSKLKHLDLTSCVS 151
Query: 128 VTDAGMKHLLS----ISTLEKLWLSETGLTADGI-ALLSSLQNLSVLDLGGLP-VTDLVL 181
V++ +K L + TL W + +T DGI AL L L L G + D L
Sbjct: 152 VSNHSLKALSDGCRMLETLNLSWCDQ--ITRDGIEALARGCAGLRALFLRGCTQLDDGAL 209
Query: 182 RSLQV-LTKLEYLDLWG-SQVSNRG-AAVLKMFPRLSFLNLAWTGVTKLPNIS----SLE 234
+ LQ +L +++ +QV++ G ++ + +L NL +G + + + S L
Sbjct: 210 KHLQKHCPELNTINMQSCTQVTDEGLVSLCRGCHKLQ--NLCVSGCSNITDASLTALGLN 267
Query: 235 CLNLSFIQQVGAE--TDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTF-KELIHL 290
C L ++ TD ++ A +N + LE+++LE+ V+D TL LS L L
Sbjct: 268 CARLKILEAARCSHFTDAGFTVLA-RNCHELEKMDLEECILVTDNTLVQLSIHCPRLQAL 326
Query: 291 SLRNASL-TDVSLHQLSSLS----KLTNLSIRDA-VLTNSGLGSFKPPRSLKLLDLHGGW 344
SL + L TD + LSS + +LT + + + ++T+ L K L+ ++L+
Sbjct: 327 SLSHCELITDDGIRALSSSTCGQERLTVVELDNCPLITDVTLEHLKTCHRLERIELYDCQ 386
Query: 345 LLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSL 388
+T I + P I+V + + P + G R +
Sbjct: 387 QVTRAGIKRIRAHLPEIKVHAYFAPVTPPPSVHGGGQRLCRCCI 430
>gi|16802310|ref|NP_463795.1| internalin E [Listeria monocytogenes EGD-e]
gi|3980136|emb|CAA07458.1| internalin E [Listeria monocytogenes]
gi|16409629|emb|CAD00791.1| internalin E [Listeria monocytogenes EGD-e]
Length = 499
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 106/229 (46%), Gaps = 21/229 (9%)
Query: 156 GIALLSSLQ---NLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMF 211
GI + LQ NLS L+L VTDL L LTK+ L L G+ + + A A LK
Sbjct: 85 GITTIEGLQYLTNLSELELIDNQVTDL--NPLTNLTKITELRLSGNPLKDVSALAGLKNL 142
Query: 212 PRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 271
+ + T VT L +S+L+ LNL Q + +T L L++L+ L+ T
Sbjct: 143 KTMDLIYTDITDVTPLAGLSNLQVLNLDINQ--------ITDITPLAGLSNLQFLSFGST 194
Query: 272 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP 331
QVSD T PL+ +L L+ N+ ++DVS L+ LS LT + + + + S +
Sbjct: 195 QVSDLT--PLANLSKLTTLNAMNSKVSDVS--PLTGLSNLTEVYLEENQI--SDVSPLAK 248
Query: 332 PRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNG 380
+L ++ L + + Q + P + +I P D I NG
Sbjct: 249 LPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAP-DTISDNG 296
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 22/197 (11%)
Query: 106 SALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQN 165
+ + L +T L EL+L +VTD + L +++ + +L LS G ++ L+ L+N
Sbjct: 87 TTIEGLQYLTNLSELELIDN-QVTD--LNPLTNLTKITELRLS--GNPLKDVSALAGLKN 141
Query: 166 LSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV- 224
L +DL +TD+ L L+ L+ L+L +Q+++ L L FL+ T V
Sbjct: 142 LKTMDLIYTDITDVT--PLAGLSNLQVLNLDINQITD--ITPLAGLSNLQFLSFGSTQVS 197
Query: 225 --TKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 282
T L N+S L LN A V ++ L L++L + LE+ Q+SD + PL+
Sbjct: 198 DLTPLANLSKLTTLN--------AMNSKVSDVSPLTGLSNLTEVYLEENQISDVS--PLA 247
Query: 283 TFKELIHLSLRNASLTD 299
L ++L N ++T+
Sbjct: 248 KLPNLSIVTLTNQTITN 264
>gi|228938544|ref|ZP_04101152.1| Internalin [Bacillus thuringiensis serovar berliner ATCC 10792]
gi|228971423|ref|ZP_04132049.1| Internalin [Bacillus thuringiensis serovar thuringiensis str.
T01001]
gi|228978036|ref|ZP_04138415.1| Internalin [Bacillus thuringiensis Bt407]
gi|228781697|gb|EEM29896.1| Internalin [Bacillus thuringiensis Bt407]
gi|228788290|gb|EEM36243.1| Internalin [Bacillus thuringiensis serovar thuringiensis str.
T01001]
gi|228821142|gb|EEM67159.1| Internalin [Bacillus thuringiensis serovar berliner ATCC 10792]
Length = 766
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 134/281 (47%), Gaps = 37/281 (13%)
Query: 41 LADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRY---LRSLNV 97
+ D+ LR L+ +++ L E ++++ E + Y A +Y L+SL V
Sbjct: 197 ITDNKLRELVNKKVFNRKDLNTPITKEELLQVKDLFLNTNEILDY-SALKYMPNLKSLTV 255
Query: 98 ADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGI 157
A+ + + + +A LK+L+ A + L+ + LE L LS +T +
Sbjct: 256 ANAK-IKDPSFFA-----NLKQLNHLALRGNEFADVTPLVKMDNLESLDLSNNKIT--NV 307
Query: 158 ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 217
A L+ ++N+ L L G + D+ +L + +L+YL+L ++++N A L +++L
Sbjct: 308 APLTEMKNVKSLYLSGNQIEDVT--ALAKMEQLDYLNLANNKITN--VAPLSALKNVTYL 363
Query: 218 NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLS------LTALQNLNHLERLNLEQT 271
LA ++ +I +L L L TDLVL+ L+ ++ + LE L + +
Sbjct: 364 TLAGN---QIEDIKALYSLPL---------TDLVLTRNKVKDLSGIEQMKQLEELWIGKN 411
Query: 272 QVSDATLFPLSTFKELIHLSLRNASLTDVS-LHQLSSLSKL 311
++ D T PLS +L L L N L D++ L L +L KL
Sbjct: 412 EIKDVT--PLSKMTQLKQLHLPNNELKDITPLSSLVNLQKL 450
>gi|83629909|gb|ABC26616.1| internalin E [Listeria monocytogenes]
gi|83629919|gb|ABC26621.1| internalin E [Listeria monocytogenes]
gi|83629925|gb|ABC26624.1| internalin E [Listeria monocytogenes]
gi|83629945|gb|ABC26634.1| internalin E [Listeria monocytogenes]
Length = 498
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 106/229 (46%), Gaps = 21/229 (9%)
Query: 156 GIALLSSLQ---NLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMF 211
GI + LQ NLS L+L VTDL L LTK+ L L G+ + + A A LK
Sbjct: 84 GITTIEGLQYLTNLSELELIDNQVTDL--NPLTNLTKITELRLSGNPLKDVSALAGLKNL 141
Query: 212 PRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 271
+ + T VT L +S+L+ LNL Q + +T L L++L+ L+ T
Sbjct: 142 KTMDLIYTDITDVTPLAGLSNLQVLNLDINQ--------ITDITPLAGLSNLQFLSFGST 193
Query: 272 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP 331
QVSD T PL+ +L L+ N+ ++DVS L+ LS LT + + + + S +
Sbjct: 194 QVSDLT--PLANLSKLTTLNAMNSKVSDVS--PLTGLSNLTEVYLEENQI--SDVSPLAK 247
Query: 332 PRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNG 380
+L ++ L + + Q + P + +I P D I NG
Sbjct: 248 LPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAP-DTISDNG 295
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 22/197 (11%)
Query: 106 SALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQN 165
+ + L +T L EL+L +VTD + L +++ + +L LS G ++ L+ L+N
Sbjct: 86 TTIEGLQYLTNLSELELIDN-QVTD--LNPLTNLTKITELRLS--GNPLKDVSALAGLKN 140
Query: 166 LSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV- 224
L +DL +TD+ L L+ L+ L+L +Q+++ L L FL+ T V
Sbjct: 141 LKTMDLIYTDITDVT--PLAGLSNLQVLNLDINQITD--ITPLAGLSNLQFLSFGSTQVS 196
Query: 225 --TKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 282
T L N+S L LN A V ++ L L++L + LE+ Q+SD + PL+
Sbjct: 197 DLTPLANLSKLTTLN--------AMNSKVSDVSPLTGLSNLTEVYLEENQISDVS--PLA 246
Query: 283 TFKELIHLSLRNASLTD 299
L ++L N ++T+
Sbjct: 247 KLPNLSIVTLTNQTITN 263
>gi|83629947|gb|ABC26635.1| internalin E [Listeria monocytogenes]
gi|83629949|gb|ABC26636.1| internalin E [Listeria monocytogenes]
gi|83629971|gb|ABC26647.1| internalin E [Listeria monocytogenes]
gi|83629973|gb|ABC26648.1| internalin E [Listeria monocytogenes]
gi|83629975|gb|ABC26649.1| internalin E [Listeria monocytogenes]
Length = 498
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 106/229 (46%), Gaps = 21/229 (9%)
Query: 156 GIALLSSLQ---NLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMF 211
GI + LQ NLS L+L VTDL L LTK+ L L G+ + + A A LK
Sbjct: 84 GITTIEGLQYLTNLSELELIDNQVTDL--NPLTNLTKITELRLSGNPLKDVSALAGLKNL 141
Query: 212 PRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 271
+ + T VT L +S+L+ LNL Q + +T L L++L+ L+ T
Sbjct: 142 KTMDLIYTDITDVTPLAGLSNLQVLNLDINQ--------ITDITPLAGLSNLQFLSFGST 193
Query: 272 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP 331
QVSD T PL+ +L L+ N+ ++DVS L+ LS LT + + + + S +
Sbjct: 194 QVSDLT--PLANLSKLTTLNAMNSKVSDVS--PLTGLSNLTEVYLEENQI--SDVSPLAK 247
Query: 332 PRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNG 380
+L ++ L + + Q + P + +I P D I NG
Sbjct: 248 LPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAP-DTISDNG 295
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 22/197 (11%)
Query: 106 SALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQN 165
+ + L +T L EL+L +VTD + L +++ + +L LS G ++ L+ L+N
Sbjct: 86 TTIEGLQYLTNLSELELIDN-QVTD--LNPLTNLTKITELRLS--GNPLKDVSALAGLKN 140
Query: 166 LSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV- 224
L +DL +TD+ L L+ L+ L+L +Q+++ L L FL+ T V
Sbjct: 141 LKTMDLIYTDITDVT--PLAGLSNLQVLNLDINQITD--ITPLAGLSNLQFLSFGSTQVS 196
Query: 225 --TKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 282
T L N+S L LN A V ++ L L++L + LE+ Q+SD + PL+
Sbjct: 197 DLTPLANLSKLTTLN--------AMNSKVSDVSPLTGLSNLTEVYLEENQISDVS--PLA 246
Query: 283 TFKELIHLSLRNASLTD 299
L ++L N ++T+
Sbjct: 247 KLPNLSIVTLTNQTITN 263
>gi|403257105|ref|XP_003921177.1| PREDICTED: F-box/LRR-repeat protein 13 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 684
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 133/281 (47%), Gaps = 21/281 (7%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLK--ELDLSRCVKVTDAGMKHLL-SISTLEK 144
F L++L++A CRR T L L G C K LDLS C +++ G +++ S + +
Sbjct: 385 FHNLQNLSLAYCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGILH 444
Query: 145 LWLSETGLTADGI--ALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQ-V 200
L +++ D AL+ +++ + G P ++D ++L KL + G++ +
Sbjct: 445 LTINDMPTLTDNCVKALVEKCSHITSMVFTGAPHISDCTFKALST-CKLRKIRFEGNKRI 503
Query: 201 SNRGAAVL-KMFPRLSFLNLA-WTGVT-----KLPNISSLECLNLSFIQQVGAETDLVLS 253
++ + K +P LS + +A G+T L + L LNL+ ++G + L
Sbjct: 504 TDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIG-DVGLRQF 562
Query: 254 LTALQNLNHLERLNLEQ-TQVSDATLFPLST-FKELIHLSLRNAS-LTDVSLHQLSSLSK 310
L ++ + LNL Q+SD ++ LS L +LSLRN LT + + ++
Sbjct: 563 LDGPASI-RIRELNLSNCVQLSDVSVMKLSERCPNLNYLSLRNCEHLTAQGIAYIVNIFS 621
Query: 311 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 351
L ++ + ++N GL + LK L + + +T+D I
Sbjct: 622 LVSIDLSGTDISNEGLSVLSRHKKLKELSVSACYRITDDGI 662
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 117/251 (46%), Gaps = 38/251 (15%)
Query: 117 LKELDLSRCVKVTDAGMKHLL-SISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 171
L+EL++S C TD M+H+ + L LS T +T + LL +LQNLS+
Sbjct: 337 LQELNVSDCPTFTDESMRHISEGCPGVLYLNLSNTTITNRTMRLLPRHFHNLQNLSLAYC 396
Query: 172 GGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWTG---- 223
TD L+ L + KL YLDL G +Q+S +G ++ + TG
Sbjct: 397 RRF--TDKGLQYLNLGNGCHKLIYLDLSGCTQISVQG---------FRYIANSCTGILHL 445
Query: 224 -VTKLPNISS-------LECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE-QTQVS 274
+ +P ++ +C +++ + GA + AL L ++ E +++
Sbjct: 446 TINDMPTLTDNCVKALVEKCSHITSMVFTGAPHISDCTFKALSTCK-LRKIRFEGNKRIT 504
Query: 275 DATL-FPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSF-K 330
DA+ F + L H+ + + +TD SL LS L +LT L++ + V + + GL F
Sbjct: 505 DASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDVGLRQFLD 564
Query: 331 PPRSLKLLDLH 341
P S+++ +L+
Sbjct: 565 GPASIRIRELN 575
>gi|422414916|ref|ZP_16491873.1| internalin A, partial [Listeria innocua FSL J1-023]
gi|313625062|gb|EFR94940.1| internalin A [Listeria innocua FSL J1-023]
Length = 676
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 117/222 (52%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSGNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
+T I++LS L NL L ++D+ L +L L+ L L G+Q+ + G V
Sbjct: 217 NKVT--DISVLSKLTNLERLIATNNQISDIT--PLGILINLDELSLNGNQLKDIGTLV-- 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L ++ L L ++ + + +++ L L L L L
Sbjct: 271 SLTNLTNLDLANNQISNLAPLTDLTKL-----TELKLGANQISNISPLAGLTALTNLELH 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYINNISDIS--PVSSLTKL 363
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 88/168 (52%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I+ L++L NL+ L L +TD+ L+ LT L L+L G+ +S+ A + L +LS
Sbjct: 135 ISPLANLTNLTGLTLFTNQITDI--DPLKNLTNLNRLELSGNTISDISALSGLTSLQQLS 192
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S ++ V ++ L L +LERL Q+SD
Sbjct: 193 FGNQV-TDLKPLANLTTLERLDIS--------SNKVTDISVLSKLTNLERLIATNNQISD 243
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L SL+ LTNL + + ++N
Sbjct: 244 IT--PLGILINLDELSLNGNQLKDIG--TLVSLTNLTNLDLANNQISN 287
>gi|12054796|emb|CAC20636.1| internalin E [Listeria monocytogenes]
Length = 499
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 106/229 (46%), Gaps = 21/229 (9%)
Query: 156 GIALLSSLQ---NLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMF 211
GI + LQ NLS L+L VTDL L LTK+ L L G+ + + A A LK
Sbjct: 85 GITTIEGLQYLTNLSELELIDNQVTDL--NPLTNLTKITELRLSGNPLKDVSALAGLKNL 142
Query: 212 PRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 271
+ + T VT L +S+L+ LNL Q + +T L L++L+ L+ T
Sbjct: 143 KTMDLIYTDITDVTPLAGLSNLQVLNLDINQ--------ITDITPLAGLSNLQFLSFGST 194
Query: 272 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP 331
QVSD T PL+ +L L+ N+ ++DVS L+ LS LT + + + + S +
Sbjct: 195 QVSDLT--PLANLSKLTALNAMNSKVSDVS--PLTGLSNLTEVYLEENQI--SDVSPLAK 248
Query: 332 PRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNG 380
+L ++ L + + Q + P + +I P D I NG
Sbjct: 249 LPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAP-DTISDNG 296
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 22/197 (11%)
Query: 106 SALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQN 165
+ + L +T L EL+L +VTD + L +++ + +L LS G ++ L+ L+N
Sbjct: 87 TTIEGLQYLTNLSELELIDN-QVTD--LNPLTNLTKITELRLS--GNPLKDVSALAGLKN 141
Query: 166 LSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV- 224
L +DL +TD+ L L+ L+ L+L +Q+++ L L FL+ T V
Sbjct: 142 LKTMDLIYTDITDVT--PLAGLSNLQVLNLDINQITD--ITPLAGLSNLQFLSFGSTQVS 197
Query: 225 --TKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 282
T L N+S L LN A V ++ L L++L + LE+ Q+SD + PL+
Sbjct: 198 DLTPLANLSKLTALN--------AMNSKVSDVSPLTGLSNLTEVYLEENQISDVS--PLA 247
Query: 283 TFKELIHLSLRNASLTD 299
L ++L N ++T+
Sbjct: 248 KLPNLSIVTLTNQTITN 264
>gi|357511817|ref|XP_003626197.1| F-box/LRR-repeat protein [Medicago truncatula]
gi|355501212|gb|AES82415.1| F-box/LRR-repeat protein [Medicago truncatula]
Length = 605
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 119/252 (47%), Gaps = 20/252 (7%)
Query: 83 MAYLG------AFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHL 136
+ Y+G A L +++V+ C AL+ LKE+++ +C+ VTD G+ +
Sbjct: 146 LGYVGLEMLIKACPLLEAVDVSHCWGFGDREAAALSCGGKLKEINMDKCLGVTDIGLAKI 205
Query: 137 -LSISTLEKLWLSETGLTAD-GIALLS-SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
+ S LEKL L +D GI LLS +L+ LD+ L VT+ LRS+ L KLE
Sbjct: 206 AVGCSKLEKLSLKWCLEISDLGIDLLSKKCFDLNFLDVSYLKVTNESLRSIASLLKLEVF 265
Query: 194 DLWGSQ-VSNRGAAVL-KMFPRLSFLNLAWTGVTK----LPNISSLECLNLSFIQQVGAE 247
+ G V + G L K P L ++++ L IS E L I
Sbjct: 266 IMVGCYLVDDAGLQFLEKGCPLLKAIDVSRCNCVSPSGLLSVISGHE--GLEQINAGHCL 323
Query: 248 TDLVLSLT-ALQNLNHLERLNLEQTQVSDATLFPL-STFKELIHLSL-RNASLTDVSLHQ 304
++L LT L+NL HL + ++ +VSD L + S K L+ L L + +T++ + Q
Sbjct: 324 SELSAPLTNGLKNLKHLSVIRIDGVRVSDFILQIIGSNCKSLVELGLSKCIGVTNMGIMQ 383
Query: 305 LSSLSKLTNLSI 316
+ LT L +
Sbjct: 384 VVGCCNLTTLDL 395
>gi|384185344|ref|YP_005571240.1| internalin [Bacillus thuringiensis serovar chinensis CT-43]
gi|410673634|ref|YP_006926005.1| internalin-A [Bacillus thuringiensis Bt407]
gi|452197655|ref|YP_007477736.1| internalin, putative [Bacillus thuringiensis serovar thuringiensis
str. IS5056]
gi|326939053|gb|AEA14949.1| internalin [Bacillus thuringiensis serovar chinensis CT-43]
gi|409172763|gb|AFV17068.1| internalin-A [Bacillus thuringiensis Bt407]
gi|452103048|gb|AGF99987.1| internalin, putative [Bacillus thuringiensis serovar thuringiensis
str. IS5056]
Length = 760
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 134/281 (47%), Gaps = 37/281 (13%)
Query: 41 LADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRY---LRSLNV 97
+ D+ LR L+ +++ L E ++++ E + Y A +Y L+SL V
Sbjct: 191 ITDNKLRELVNKKVFNRKDLNTPITKEELLQVKDLFLNTNEILDY-SALKYMPNLKSLTV 249
Query: 98 ADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGI 157
A+ + + + +A LK+L+ A + L+ + LE L LS +T +
Sbjct: 250 ANAK-IKDPSFFA-----NLKQLNHLALRGNEFADVTPLVKMDNLESLDLSNNKIT--NV 301
Query: 158 ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 217
A L+ ++N+ L L G + D+ +L + +L+YL+L ++++N A L +++L
Sbjct: 302 APLTEMKNVKSLYLSGNQIEDVT--ALAKMEQLDYLNLANNKITN--VAPLSALKNVTYL 357
Query: 218 NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLS------LTALQNLNHLERLNLEQT 271
LA ++ +I +L L L TDLVL+ L+ ++ + LE L + +
Sbjct: 358 TLAGN---QIEDIKALYSLPL---------TDLVLTRNKVKDLSGIEQMKQLEELWIGKN 405
Query: 272 QVSDATLFPLSTFKELIHLSLRNASLTDVS-LHQLSSLSKL 311
++ D T PLS +L L L N L D++ L L +L KL
Sbjct: 406 EIKDVT--PLSKMTQLKQLHLPNNELKDITPLSSLVNLQKL 444
>gi|290997259|ref|XP_002681199.1| predicted protein [Naegleria gruberi]
gi|284094822|gb|EFC48455.1| predicted protein [Naegleria gruberi]
Length = 449
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 95/195 (48%), Gaps = 8/195 (4%)
Query: 70 IELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVT 129
+E+ ++S D E + F L LN+ C + + + ++ ++ L L+ S+C ++
Sbjct: 141 LEISTDSSNDWEKAKSISTFSQLTKLNIQ-CSKNINMIITSVGSLSNLTYLNASQC-NIS 198
Query: 130 DAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK 189
+K L + L KL LS+ + DG+ +++ L NL L+L +T+ + L LTK
Sbjct: 199 SVNLK-FLQLFKLTKLDLSKNNIGGDGMKVIALLTNLKYLNLQDCNITNDCITHLTSLTK 257
Query: 190 LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETD 249
L +L++ + + N G ++ L++L++ G + N ++ N Q +
Sbjct: 258 LVHLNVGDNYIGNEGLFLISSLRNLTYLSVER-GTGRRFNERQVDIAN----QGMEINHQ 312
Query: 250 LVLSLTALQNLNHLE 264
+ LT L NL HL+
Sbjct: 313 GIAHLTNLHNLRHLD 327
Score = 41.2 bits (95), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 81/181 (44%), Gaps = 25/181 (13%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
+ + + +T LK L+L C +T+ + HL S++ L L + + + +G+ L+SS
Sbjct: 220 IGGDGMKVIALLTNLKYLNLQDC-NITNDCITHLTSLTKLVHLNVGDNYIGNEGLFLISS 278
Query: 163 LQNLSVLDL-----------------GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
L+NL+ L + G+ + + L L L +LD G + ++G
Sbjct: 279 LRNLTYLSVERGTGRRFNERQVDIANQGMEINHQGIAHLTNLHNLRHLDFSGKPICDKGI 338
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLE----CLNLSFIQQ-VGAETDLVLSLTALQNL 260
+ + LN++ + +I SL+ +NL+ + +G + +LS L+ L
Sbjct: 339 EFIGKLNSIEILNVSRCNCSG--DIESLQKSPHLINLNIVGNPIGDKGAEILSRMTLEEL 396
Query: 261 N 261
N
Sbjct: 397 N 397
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 25/141 (17%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
+N++ + M + L+ LN+ DC +T+ + LT +T L L+ V G +
Sbjct: 217 KNNIGGDGMKVIALLTNLKYLNLQDCN-ITNDCITHLTSLTKLVHLN----VGDNYIGNE 271
Query: 135 HLLSISTLEKL-WLS-ETG------------------LTADGIALLSSLQNLSVLDLGGL 174
L IS+L L +LS E G + GIA L++L NL LD G
Sbjct: 272 GLFLISSLRNLTYLSVERGTGRRFNERQVDIANQGMEINHQGIAHLTNLHNLRHLDFSGK 331
Query: 175 PVTDLVLRSLQVLTKLEYLDL 195
P+ D + + L +E L++
Sbjct: 332 PICDKGIEFIGKLNSIEILNV 352
>gi|255026402|ref|ZP_05298388.1| internalin E [Listeria monocytogenes FSL J2-003]
Length = 480
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 106/229 (46%), Gaps = 21/229 (9%)
Query: 156 GIALLSSLQ---NLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMF 211
GI + LQ NLS L+L VTDL L LTK+ L L G+ + + A A LK
Sbjct: 66 GITTIEGLQYLTNLSELELIDNQVTDL--NPLTNLTKITELRLSGNPLKDVSALAGLKNL 123
Query: 212 PRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 271
+ + T VT L +S+L+ LNL Q + +T L L++L+ L+ T
Sbjct: 124 KTMDLIYTDITDVTPLAGLSNLQVLNLDINQ--------ITDITPLAGLSNLQFLSFGST 175
Query: 272 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP 331
QVSD T PL+ +L L+ N+ ++DVS L+ LS LT + + + + S +
Sbjct: 176 QVSDLT--PLANLSKLTTLNAMNSKVSDVS--PLTGLSNLTEVYLEENQI--SDVSPLAK 229
Query: 332 PRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNG 380
+L ++ L + + Q + P + +I P D I NG
Sbjct: 230 LPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAP-DTISDNG 277
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 22/197 (11%)
Query: 106 SALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQN 165
+ + L +T L EL+L +VTD + L +++ + +L LS G ++ L+ L+N
Sbjct: 68 TTIEGLQYLTNLSELELIDN-QVTD--LNPLTNLTKITELRLS--GNPLKDVSALAGLKN 122
Query: 166 LSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV- 224
L +DL +TD+ L L+ L+ L+L +Q+++ L L FL+ T V
Sbjct: 123 LKTMDLIYTDITDVT--PLAGLSNLQVLNLDINQITD--ITPLAGLSNLQFLSFGSTQVS 178
Query: 225 --TKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 282
T L N+S L LN A V ++ L L++L + LE+ Q+SD + PL+
Sbjct: 179 DLTPLANLSKLTTLN--------AMNSKVSDVSPLTGLSNLTEVYLEENQISDVS--PLA 228
Query: 283 TFKELIHLSLRNASLTD 299
L ++L N ++T+
Sbjct: 229 KLPNLSIVTLTNQTITN 245
>gi|260830796|ref|XP_002610346.1| hypothetical protein BRAFLDRAFT_136091 [Branchiostoma floridae]
gi|229295711|gb|EEN66356.1| hypothetical protein BRAFLDRAFT_136091 [Branchiostoma floridae]
Length = 305
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 97/219 (44%), Gaps = 15/219 (6%)
Query: 139 ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
+S L+++ L G+T SL+NL L L G +T + ++LQ L L++L L +
Sbjct: 21 LSQLQEIRLDRNGVTDLDRDAFRSLENLYSLRLAGNRLTTVPQQALQYLPVLKHLHLQQN 80
Query: 199 QVSNRGAAVLKMFPRLSFLNL-----AWTGVTKLPNISSLECLNLSF--IQQVGAETDLV 251
+ + P L+ L+L A + +S+LE LNLS + Q+ D
Sbjct: 81 SIRSVSEDDFSGLPSLTQLDLSDNLIAEVDTSAFTPLSNLEVLNLSLNPLSQLRHGPD-- 138
Query: 252 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
Q L L RL L+ T ++D T L F L L L + + V+ S L
Sbjct: 139 ------QGLPWLRRLYLQHTAITDVTAEMLKGFSNLTDLELGSCRIQSVAADAFSPTRGL 192
Query: 312 TNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 350
L +R+ +TN G+F P L+ L L L+ D+
Sbjct: 193 AYLGLRNNSITNIAAGTFAPLSKLETLYLDDNGLVGLDS 231
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 108/260 (41%), Gaps = 12/260 (4%)
Query: 111 LTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLD 170
+G++ L+E+ L R VTD S+ L L L+ LT L L L L
Sbjct: 18 FSGLSQLQEIRLDRN-GVTDLDRDAFRSLENLYSLRLAGNRLTTVPQQALQYLPVLKHLH 76
Query: 171 LGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKL--- 227
L + + L L LDL + ++ + L LNL+ +++L
Sbjct: 77 LQQNSIRSVSEDDFSGLPSLTQLDLSDNLIAEVDTSAFTPLSNLEVLNLSLNPLSQLRHG 136
Query: 228 PNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 287
P+ L L ++Q A TD+ + L+ ++L L L ++ S + L
Sbjct: 137 PD-QGLPWLRRLYLQHT-AITDVTAEM--LKGFSNLTDLELGSCRIQSVAADAFSPTRGL 192
Query: 288 IHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLT 347
+L LRN S+T+++ + LSKL L + D L G+F S +L +L +L
Sbjct: 193 AYLGLRNNSITNIAAGTFAPLSKLETLYLDDNGLVGLDSGAFSQASS-RLREL---YLQN 248
Query: 348 EDAILQFCKMHPRIEVWHEL 367
+ + + RI + EL
Sbjct: 249 NEKNINLLSLMSRIPILQEL 268
>gi|357511813|ref|XP_003626195.1| F-box/LRR-repeat protein [Medicago truncatula]
gi|355501210|gb|AES82413.1| F-box/LRR-repeat protein [Medicago truncatula]
Length = 679
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 119/252 (47%), Gaps = 20/252 (7%)
Query: 83 MAYLG------AFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHL 136
+ Y+G A L +++V+ C AL+ LKE+++ +C+ VTD G+ +
Sbjct: 146 LGYVGLEMLIKACPLLEAVDVSHCWGFGDREAAALSCGGKLKEINMDKCLGVTDIGLAKI 205
Query: 137 -LSISTLEKLWLSETGLTAD-GIALLS-SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
+ S LEKL L +D GI LLS +L+ LD+ L VT+ LRS+ L KLE
Sbjct: 206 AVGCSKLEKLSLKWCLEISDLGIDLLSKKCFDLNFLDVSYLKVTNESLRSIASLLKLEVF 265
Query: 194 DLWGSQ-VSNRGAAVL-KMFPRLSFLNLAWTGVTK----LPNISSLECLNLSFIQQVGAE 247
+ G V + G L K P L ++++ L IS E L I
Sbjct: 266 IMVGCYLVDDAGLQFLEKGCPLLKAIDVSRCNCVSPSGLLSVISGHE--GLEQINAGHCL 323
Query: 248 TDLVLSLT-ALQNLNHLERLNLEQTQVSDATLFPL-STFKELIHLSL-RNASLTDVSLHQ 304
++L LT L+NL HL + ++ +VSD L + S K L+ L L + +T++ + Q
Sbjct: 324 SELSAPLTNGLKNLKHLSVIRIDGVRVSDFILQIIGSNCKSLVELGLSKCIGVTNMGIMQ 383
Query: 305 LSSLSKLTNLSI 316
+ LT L +
Sbjct: 384 VVGCCNLTTLDL 395
>gi|443730026|gb|ELU15721.1| hypothetical protein CAPTEDRAFT_201139 [Capitella teleta]
Length = 385
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 132/272 (48%), Gaps = 31/272 (11%)
Query: 90 RYLRSLNVADCRRVTSSALWALTG-MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ +RSL + C ++ S L LT MTC+ +L+LS C ++T+AG+ L+ S + L +S
Sbjct: 99 KNVRSLTLR-CSNISDSGLQMLTERMTCVFQLELSGCNEITEAGLWACLN-SRIVSLSIS 156
Query: 149 ETGLTADGI--ALLSSLQNLSVLDLGGLPVTDLVL-----RSLQVLTKLEYLDLWGSQVS 201
+ AD A+ L +L L L VTD L + L+ L W +++
Sbjct: 157 DCINVADDSVGAIAQLLPSLYELTLQAYHVTDAALSLFSAKQSYTLSILRLHSCW--EIT 214
Query: 202 NRGAA-VLKMFPRLSFLNLAWTGVTKLP---------NISSLECLNLSFIQQVGAETDLV 251
N G V+ P L+ L+L+ G +K+ N+ L+ L+LS+ ++ TD
Sbjct: 215 NHGIVNVIHALPNLTVLSLS--GCSKITDDGVELIAENLRKLKSLDLSWCPRI---TDAA 269
Query: 252 LSLTALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLS 309
L A +L LE L L++ + ++D + LST L+ L LR + L D L L ++
Sbjct: 270 LEYIAC-DLGQLEELTLDRCSHITDIGVGYLSTMTSLLRLFLRWCTQLRDFGLQHLYTMK 328
Query: 310 KLTNLSIRDA-VLTNSGLGSFKPPRSLKLLDL 340
L LS+ +LT SGL SL L+L
Sbjct: 329 SLRVLSLAGCNLLTPSGLTGLMQLFSLVELEL 360
>gi|283779302|ref|YP_003370057.1| hypothetical protein Psta_1522 [Pirellula staleyi DSM 6068]
gi|283437755|gb|ADB16197.1| hypothetical protein Psta_1522 [Pirellula staleyi DSM 6068]
Length = 303
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 85/192 (44%), Gaps = 16/192 (8%)
Query: 158 ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 217
A +SL L LDL D +L+ L L +LE LDL G+ V+ L +L L
Sbjct: 99 AAYASLTQLQQLDLSTTSADDSLLQVLPQLRQLETLDLSGTLVTGHDCPSLAGLTQLREL 158
Query: 218 NLA--------WTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
NLA W + LP LE LNL Q D + Q HL+ L L
Sbjct: 159 NLANTRFQPAAWRVINGLPK---LEKLNLGSTQ-----VDDAWVIELCQRQPHLQLLGLS 210
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 329
+T+V+D ++ +++ + L L L S+T+ + QL+ L + I + + + +
Sbjct: 211 KTKVTDQSMSAIASLRLLETLYLEQVSITNQGVQQLAKSRSLRCIDIGHNAIDDGCIAAL 270
Query: 330 KPPRSLKLLDLH 341
S+K + +H
Sbjct: 271 IAMPSMKAISIH 282
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 12/212 (5%)
Query: 129 TDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLT 188
TDA S++ L++L LS T + +L L+ L LDL G VT SL LT
Sbjct: 96 TDAAA--YASLTQLQQLDLSTTSADDSLLQVLPQLRQLETLDLSGTLVTGHDCPSLAGLT 153
Query: 189 KLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLE-CLNLSFIQQVGAE 247
+L L+L ++ V+ P+L LNL G T++ + +E C +Q +G
Sbjct: 154 QLRELNLANTRFQPAAWRVINGLPKLEKLNL---GSTQVDDAWVIELCQRQPHLQLLGLS 210
Query: 248 TDLVL--SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 305
V S++A+ +L LE L LEQ +++ + L+ + L + + + ++ D + L
Sbjct: 211 KTKVTDQSMSAIASLRLLETLYLEQVSITNQGVQQLAKSRSLRCIDIGHNAIDDGCIAAL 270
Query: 306 SSLSKLTNLSIRDAVLTNSGLG----SFKPPR 333
++ + +SI T G + PP+
Sbjct: 271 IAMPSMKAISIHRCKFTAEGKAKVHQAIPPPQ 302
>gi|261329058|emb|CBH12037.1| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei
gambiense DAL972]
Length = 537
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 113/268 (42%), Gaps = 44/268 (16%)
Query: 80 AEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSI 139
+ LG YL++L++ + V AL+ L L EL L C ++TD + HL I
Sbjct: 214 VKGFGELGRVPYLQTLSLNE-TNVDDRALFTLRATGSLVELSLESCPQLTD--VTHLSMI 270
Query: 140 STLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQ 199
TL+K+ L A G+ LL L L L G + D + +L L +D+ Q
Sbjct: 271 DTLQKIVLEGCANVAKGVGLLGRLPALRELYAGATSIADTSISALSRSGTLTKIDVKFCQ 330
Query: 200 VSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQN 259
T V+ L ++ LE +NL + V L L+
Sbjct: 331 --------------------GLTDVSPLVDMKLLEEINLEGCKNVEH------GLPCLEK 364
Query: 260 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL-HQLSSLSKLTNLSIRD 318
LN L L+L +TQ++D L L ++ L DVSL HQL +S L ++ +
Sbjct: 365 LNLLRVLHLTETQMTDDYLRGLCASCSIVVL--------DVSLCHQLVDMSPLASIETLE 416
Query: 319 AVLTNS------GLGSFKPPRSLKLLDL 340
+ N+ G+G+ R+L+ L L
Sbjct: 417 VLRANNCKSVVRGVGALGGLRALRELGL 444
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 100/271 (36%), Gaps = 50/271 (18%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
VT L + CL L + C +TD + L ++ TLE++ L GI
Sbjct: 23 VTDRHLCNVGVGKCLVRLSIESCTNLTDVSL--LTAVETLEEVRLDGCKNVVKGINEFGR 80
Query: 163 LQNLSVLDLGGLPVTDLVLRS-----------------------LQVLTKLEYLDLWGSQ 199
+ L VL L VTD LR + + LE + L G +
Sbjct: 81 MPYLRVLILKETSVTDRCLRGFASSRSLVKLFIESCSQPTDVSPISAVETLEEVRLDGCK 140
Query: 200 VSNRGAAVLKMFPRLSFLNLAWTGVT-----------KLPNISSLECLNLSFIQQVGA-E 247
+G P L L L GVT L ++ CL L+ + + E
Sbjct: 141 NVVKGINEFGRMPYLRVLILREVGVTDRCLRGLSCCRSLVELALEYCLQLTDVSPISMLE 200
Query: 248 T----------DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-S 296
T ++V L + +L+ L+L +T V D LF L L+ LSL +
Sbjct: 201 TLQKVRFDGCKNVVKGFGELGRVPYLQTLSLNETNVDDRALFTLRATGSLVELSLESCPQ 260
Query: 297 LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLG 327
LTDV+ LS + L + + G+G
Sbjct: 261 LTDVT--HLSMIDTLQKIVLEGCANVAKGVG 289
>gi|440712554|ref|ZP_20893170.1| hypothetical protein RBSWK_00227 [Rhodopirellula baltica SWK14]
gi|436442709|gb|ELP35820.1| hypothetical protein RBSWK_00227 [Rhodopirellula baltica SWK14]
Length = 341
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 92/205 (44%), Gaps = 22/205 (10%)
Query: 130 DAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK 189
DA K + + L + +T +T DG ++L+ L L + L PVTD L S+ L K
Sbjct: 131 DAKAKSISGLPALVAVTFQDTSVTDDGASVLAELNELQDVSLMNSPVTDKTLASISTLPK 190
Query: 190 LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSFIQQV 244
L L+L G++++ + P L L LA T G+ + NI LE +NL ++ ++
Sbjct: 191 LTKLNLRGTKITGEAFEPISKLP-LESLELAETDFGPEGMPAIANIEGLEKINL-WLTKI 248
Query: 245 GAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS--- 301
E SL A + L LN++ P+ L HL L + T VS
Sbjct: 249 DNE-----SLKAFEGKTSLTVLNVDNCPAITEEAIPV--IVSLPHLKLLHLGKTSVSPDA 301
Query: 302 LHQLSSLSKLTNLSIRDAVLTNSGL 326
L QL L +L L + TN GL
Sbjct: 302 LPQLKPLQELETLFV-----TNLGL 321
>gi|255024787|ref|ZP_05296773.1| internalin A [Listeria monocytogenes FSL J1-208]
Length = 200
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 111/206 (53%), Gaps = 19/206 (9%)
Query: 106 SALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQN 165
S + AL+G+T L++L +VTD +K L +++TLE+L +S ++ I++L+ L N
Sbjct: 1 SDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISSNKVS--DISVLAKLTN 54
Query: 166 LSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 225
L L ++D+ L +LT L+ L L G+Q+ + G L L+ L+LA ++
Sbjct: 55 LESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIGT--LASLTNLTDLDLANNQIS 110
Query: 226 KLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFK 285
L +S L L ++ + + +++ L L L L L + Q+ D + P+S K
Sbjct: 111 NLAPLSGLTKL-----TELKLGANQISNISPLAGLTALTNLELNENQLEDIS--PISNLK 163
Query: 286 ELIHLSLRNASLTDVSLHQLSSLSKL 311
L +L+L +++D+S +SSL+KL
Sbjct: 164 NLTYLTLYFNNISDIS--PVSSLTKL 187
>gi|153940509|ref|YP_001391037.1| hypothetical protein CLI_1777 [Clostridium botulinum F str.
Langeland]
gi|384462076|ref|YP_005674671.1| leucine rich repeat protein [Clostridium botulinum F str. 230613]
gi|152936405|gb|ABS41903.1| leucine rich repeat protein [Clostridium botulinum F str.
Langeland]
gi|295319093|gb|ADF99470.1| leucine rich repeat protein [Clostridium botulinum F str. 230613]
Length = 1359
Score = 54.7 bits (130), Expect = 9e-05, Method: Composition-based stats.
Identities = 69/275 (25%), Positives = 129/275 (46%), Gaps = 34/275 (12%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N +I+++G + ++ LG YL ++A+ V L +L L++LD++ C
Sbjct: 491 NLSSIKIQGNLLNEINNISILGKLEYL---SIANTNVVKIDVLRSLVN---LRKLDITGC 544
Query: 126 VKVTDAGMKHLLSISTL--EKLWLSETGLTADGIALLSS---------LQNLSVLDLGGL 174
K+ + HL + + E + + L + L+++ L +++ L+L G
Sbjct: 545 TKIDTQVLNHLSDVEIIGNEIVTFGDKVLEREIRELINNYSEPIYKRQLLSITKLELSGR 604
Query: 175 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLE 234
+ D L+ L+ + L YLDL +++SN + +K L L L + + I SL
Sbjct: 605 GIVD--LQGLESMENLIYLDLSNNEISNIDS--IKKLINLKKLVLHKNKIGSIKVIESLT 660
Query: 235 CLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 294
L +++ +L+ +TAL L+ L RL+L + + ++ L L +LSL
Sbjct: 661 KL-----EELDLSNNLIGDITALGGLSQLTRLDLSRNGI--VSINSLGGLINLQYLSLYE 713
Query: 295 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 329
+++ + SL KL NL R+ L NSG+ +F
Sbjct: 714 NKISE----REESLKKLYNL--RELYLKNSGISNF 742
Score = 48.1 bits (113), Expect = 0.008, Method: Composition-based stats.
Identities = 55/168 (32%), Positives = 84/168 (50%), Gaps = 10/168 (5%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N +I LRG + E + L R L L++ R V +L+ + +T LK L L+
Sbjct: 833 NLHSINLRGHGKL--EGLENLMPLRGLIKLDLQG-REVNYISLYYINYLTSLKYLYLNNM 889
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
D + L +++ L L LS TG++ I++LS L+NL+ L LGG +TD L L+
Sbjct: 890 NLTGD--LSFLENLTDLRVLDLSRTGIS--NISILSKLRNLNELYLGGNKITD--LSYLE 943
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 233
LT L LDL G+ A L+ L +L L T K+ + S++
Sbjct: 944 NLTNLIKLDLVGNNDITSIYA-LRNLINLRYLTLPITNPKKIQDYSAV 990
Score = 47.0 bits (110), Expect = 0.021, Method: Composition-based stats.
Identities = 53/203 (26%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 176
+KELD G++++ + LEKL LS T + I+LL L NL +++ +
Sbjct: 357 IKELDFHNAHIEKLNGIENM---TALEKLNLSGTDIK--DISLLKYLTNLREVNISNTSI 411
Query: 177 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
+D+ +L+ + YL+L ++++ V+K F + L ++ T ++ +PN++SL L
Sbjct: 412 SDIT--ALESSIYIRYLNLNKTEITT--LEVIKKFEHIEKLYVSGTKISTIPNLNSLMEL 467
Query: 237 NLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFP---LSTFKELIHLSLR 293
+LS +L + N ++L LNL ++ L +S +L +LS+
Sbjct: 468 DLS-------NCNLTSNNFLSSNFSNLVYLNLSSIKIQGNLLNEINNISILGKLEYLSIA 520
Query: 294 NASLTDVSLHQLSSLSKLTNLSI 316
N ++ + + L SL L L I
Sbjct: 521 NTNVVKIDV--LRSLVNLRKLDI 541
>gi|170758424|ref|YP_001787104.1| hypothetical protein CLK_1164 [Clostridium botulinum A3 str. Loch
Maree]
gi|169405413|gb|ACA53824.1| leucine rich repeat protein [Clostridium botulinum A3 str. Loch
Maree]
Length = 1359
Score = 54.7 bits (130), Expect = 9e-05, Method: Composition-based stats.
Identities = 69/275 (25%), Positives = 129/275 (46%), Gaps = 34/275 (12%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N +I+++G + ++ LG YL ++A+ V L +L L++LD++ C
Sbjct: 491 NLSSIKIQGNLLNEINNISILGKLEYL---SIANTNVVNIDVLRSLVN---LRKLDITGC 544
Query: 126 VKVTDAGMKHLLSISTL--EKLWLSETGLTADGIALLSS---------LQNLSVLDLGGL 174
K+ + HL + + E + + L + L+++ L +++ L+L G
Sbjct: 545 TKIDTQVLNHLSDVEIIGNEIVTFGDKVLEREIRELINNYSEPIYKRQLLSITKLELSGR 604
Query: 175 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLE 234
+ D L+ L+ + L YLDL +++SN + +K L L L + + I SL
Sbjct: 605 GIVD--LQGLESMENLIYLDLSNNEISNIDS--IKKLINLKKLVLHKNKIGSIKVIESLT 660
Query: 235 CLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 294
L +++ +L+ +TAL L+ L RL+L + + ++ L L +LSL
Sbjct: 661 KL-----EELDLSNNLIGDITALGGLSQLTRLDLSRNGI--VSINSLGGLINLQYLSLYE 713
Query: 295 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 329
+++ + SL KL NL R+ L NSG+ +F
Sbjct: 714 NKISE----REESLKKLYNL--RELYLKNSGVSNF 742
Score = 50.1 bits (118), Expect = 0.002, Method: Composition-based stats.
Identities = 85/393 (21%), Positives = 153/393 (38%), Gaps = 114/393 (29%)
Query: 37 LPAHLADSLLRHLIRRRL------IFPSLLEVFK----HNA--------------EAIEL 72
+P D + L+R+ + ++PS LE K HNA E + L
Sbjct: 325 IPIEFKDKVFEELVRKEINKPSGYVYPSDLENIKELDFHNAHIEKLNGIENMTALEKLNL 384
Query: 73 RGENSVDAEWMAYLGAFR-------------------YLRSLNVADCR------------ 101
G + D + YL R Y+R LN+
Sbjct: 385 SGTDIKDISLLKYLTNLREVNISNTSISDITALESSIYIRYLNLNKTEITTLEVIKKFEH 444
Query: 102 ----RVTSSALWALTGMTCLKELDLSRC----------------------VKVTDAGMKH 135
V+ + + + + L ELDLS C +K+ +
Sbjct: 445 IEKLYVSGTKISTIPNLNSLMELDLSNCNLTSNNFLSSNFSNLVYLNLSSIKIQGNLLNE 504
Query: 136 LLSISTLEKL-WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 194
+ +IS L KL +LS I +L SL NL LD+ G D QVL L ++
Sbjct: 505 INNISILGKLEYLSIANTNVVNIDVLRSLVNLRKLDITGCTKID-----TQVLNHLSDVE 559
Query: 195 LWGSQVSNRGAAVLK-------------MFPR----LSFLNLAWTGVTKLPNISSLECLN 237
+ G+++ G VL+ ++ R ++ L L+ G+ L + S+E N
Sbjct: 560 IIGNEIVTFGDKVLEREIRELINNYSEPIYKRQLLSITKLELSGRGIVDLQGLESME--N 617
Query: 238 LSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 297
L ++ E + ++ +++ L +L++L L + ++ + + + +L L L N +
Sbjct: 618 LIYLDLSNNE---ISNIDSIKKLINLKKLVLHKNKIGSIKV--IESLTKLEELDLSNNLI 672
Query: 298 TDVSLHQLSSLSKLTNLSI-RDAVLTNSGLGSF 329
D++ L LS+LT L + R+ +++ + LG
Sbjct: 673 GDIT--ALGGLSQLTRLDLSRNGIVSINSLGGL 703
Score = 48.1 bits (113), Expect = 0.008, Method: Composition-based stats.
Identities = 55/168 (32%), Positives = 84/168 (50%), Gaps = 10/168 (5%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N +I LRG + E + L R L L++ R V +L+ + +T LK L L+
Sbjct: 833 NLHSINLRGHGKL--EGLENLMPLRGLIKLDLQG-REVNYISLYYINYLTSLKYLYLNNM 889
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
D + L +++ L L LS TG++ I++LS L+NL+ L LGG +TD L L+
Sbjct: 890 NLTGD--LSFLENLTDLRVLDLSRTGIS--NISILSKLRNLNELYLGGNKITD--LSYLE 943
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 233
LT L LDL G+ A L+ L +L L T K+ + S++
Sbjct: 944 NLTNLIKLDLVGNNDITSIYA-LRNLINLRYLTLPITNPKKIQDYSAV 990
>gi|16802378|ref|NP_463863.1| hypothetical protein lmo0333 [Listeria monocytogenes EGD-e]
gi|386049260|ref|YP_005967251.1| internalin-I [Listeria monocytogenes FSL R2-561]
gi|404282763|ref|YP_006683660.1| internalin I [Listeria monocytogenes SLCC2372]
gi|405757319|ref|YP_006686595.1| internalin I [Listeria monocytogenes SLCC2479]
gi|81849931|sp|Q8YA32.1|INLI_LISMO RecName: Full=Internalin-I; Flags: Precursor
gi|16409711|emb|CAC98412.1| lmo0333 [Listeria monocytogenes EGD-e]
gi|346423106|gb|AEO24631.1| internalin-I [Listeria monocytogenes FSL R2-561]
gi|404232265|emb|CBY53668.1| internalin I (LPXTG motif) [Listeria monocytogenes SLCC2372]
gi|404235201|emb|CBY56603.1| internalin I (LPXTG motif) [Listeria monocytogenes SLCC2479]
Length = 1778
Score = 54.7 bits (130), Expect = 9e-05, Method: Composition-based stats.
Identities = 70/305 (22%), Positives = 145/305 (47%), Gaps = 46/305 (15%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
+S E + L L++L ++D +T+ + A+T + LK L L C +T G
Sbjct: 375 DSCAIEDLGTLNNLPKLQTLVLSDNENLTN--ITAITDLPQLKTLTLDGC-GITSIGT-- 429
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
L ++ LEKL L E +T+ I+ ++ L LS LD+ +T + L+ L LE+L++
Sbjct: 430 LDNLPKLEKLDLKENQITS--ISEITDLPRLSYLDVSVNNLT--TIGDLKKLPLLEWLNV 485
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGV------TKLPNISSLECLNLSF--------- 240
+++S+ + L FP L+++N++ + T+LP++ N S
Sbjct: 486 SSNRLSD--VSTLTNFPSLNYINISNNVIRTVGKMTELPSLKEFYAQNNSISDISMIHDM 543
Query: 241 --IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLF----PLSTFKELIHL---- 290
+++V A +L+ ++ NL L+ L++ +++ ++ L TF +L
Sbjct: 544 PNLRKVDASNNLITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLETFNAQTNLITNI 603
Query: 291 ----SLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS------GLGSFKPPRSLKLLDL 340
+L + + ++S +++ SL+ + +L + ++ + LG+ L++LDL
Sbjct: 604 GTMDNLPDLTYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDL 663
Query: 341 HGGWL 345
+L
Sbjct: 664 QNNYL 668
Score = 39.7 bits (91), Expect = 2.9, Method: Composition-based stats.
Identities = 62/258 (24%), Positives = 110/258 (42%), Gaps = 43/258 (16%)
Query: 94 SLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLT 153
SLN + + +T + LKE ++ ++D M H + L K+ S +T
Sbjct: 501 SLNYINISNNVIRTVGKMTELPSLKEF-YAQNNSISDISMIH--DMPNLRKVDASNNLIT 557
Query: 154 ADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQ---VSNRGAAVLKM 210
I +L L LD+ +T S V+ L L+ + +Q ++N G +
Sbjct: 558 --NIGTFDNLPKLQSLDVHSNRIT-----STSVIHDLPSLETFNAQTNLITNIGT--MDN 608
Query: 211 FPRLSFLNLAWTGVTKLPNISSLECL-------NLSFIQQVGAE---------------- 247
P L+++NL++ + L I L L N S+++ +G
Sbjct: 609 LPDLTYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDLQNNYL 668
Query: 248 --TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 305
T +L++L +L +L LNL D + LST LI+L+L + + D+S L
Sbjct: 669 NYTGTEGNLSSLSDLTNLTELNLRNNVYID-DISGLSTLSRLIYLNLDSNKIEDIS--AL 725
Query: 306 SSLSKLTNLSIRDAVLTN 323
S+L+ L L++ + + N
Sbjct: 726 SNLTNLQELTLENNKIEN 743
>gi|5739323|gb|AAD50430.1|AF166121_1 Cf2/Cf5 disease resistance protein homolog [Hordeum vulgare subsp.
vulgare]
Length = 893
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 129/297 (43%), Gaps = 45/297 (15%)
Query: 99 DCRRVTSSALWALTGMTC------LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGL 152
DC R WA G+TC + LDLSR + LLS+ L+ L L T L
Sbjct: 67 DCCR------WA--GITCSNMTGRVIGLDLSRRFSLVGQISPSLLSLEHLQYLNLKSTSL 118
Query: 153 TADG---IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
G L SL NL LDL + + ++ L L+KLEYLDL ++ + L
Sbjct: 119 CGHGGRIPEFLGSLNNLRHLDLSYMSFSGVLPPQLGNLSKLEYLDLSNMEMDVIDISWLS 178
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTAL----QNLNHLER 265
PRL +L++++T N+SS+ + + + DL LS +L Q+L HL
Sbjct: 179 RLPRLMYLDISYT------NLSSIAAWP-PVVNMIPSLKDLRLSYCSLSSTNQSLTHLNL 231
Query: 266 LNLEQTQVS-DATLFPLSTFKELIHLSLRNASLTDVSLHQ--LSSLSKLTNLSIRDAVLT 322
NL+ +S + P+++ S+ L+D SLH ++L K+T L R
Sbjct: 232 TNLQHLDLSRNYFAHPIASSWFWNVTSIEYLDLSDTSLHGPFPNALGKMTFL--RQLSFF 289
Query: 323 NSGLGSFKPPRSLKLLDLHGGWL---LTEDAILQFCKMHPRIEVWHELSVICPSDQI 376
G + L DL WL L+ + +F K PR CPS+++
Sbjct: 290 GIGNTATMTVDLKNLCDLEIIWLDGSLSSGNVTEFLKKLPR---------RCPSNRL 337
>gi|254829631|ref|ZP_05234318.1| cell wall surface anchor family protein [Listeria monocytogenes FSL
N3-165]
gi|258602049|gb|EEW15374.1| cell wall surface anchor family protein [Listeria monocytogenes FSL
N3-165]
Length = 1778
Score = 54.7 bits (130), Expect = 9e-05, Method: Composition-based stats.
Identities = 70/305 (22%), Positives = 145/305 (47%), Gaps = 46/305 (15%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
+S E + L L++L ++D +T+ + A+T + LK L L C +T G
Sbjct: 375 DSCAIEDLGTLNNLPKLQTLVLSDNENLTN--ITAITDLPQLKTLTLDGC-GITSIGT-- 429
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
L ++ LEKL L E +T+ I+ ++ L LS LD+ +T + L+ L LE+L++
Sbjct: 430 LDNLPKLEKLDLKENQITS--ISEITDLPRLSYLDVSVNNLT--TIGDLKKLPLLEWLNV 485
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGV------TKLPNISSLECLNLSF--------- 240
+++S+ + L FP L+++N++ + T+LP++ N S
Sbjct: 486 SSNRLSD--VSTLTNFPSLNYINISNNVIRTVGKMTELPSLKEFYAQNNSISDISMIHDM 543
Query: 241 --IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLF----PLSTFKELIHL---- 290
+++V A +L+ ++ NL L+ L++ +++ ++ L TF +L
Sbjct: 544 PNLRKVDASNNLITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLETFNAQTNLIANI 603
Query: 291 ----SLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS------GLGSFKPPRSLKLLDL 340
+L + + ++S +++ SL+ + +L + ++ + LG+ L++LDL
Sbjct: 604 GTMDNLPDLTYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDL 663
Query: 341 HGGWL 345
+L
Sbjct: 664 QNNYL 668
Score = 39.7 bits (91), Expect = 3.2, Method: Composition-based stats.
Identities = 62/258 (24%), Positives = 110/258 (42%), Gaps = 43/258 (16%)
Query: 94 SLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLT 153
SLN + + +T + LKE ++ ++D M H + L K+ S +T
Sbjct: 501 SLNYINISNNVIRTVGKMTELPSLKEF-YAQNNSISDISMIH--DMPNLRKVDASNNLIT 557
Query: 154 ADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQ---VSNRGAAVLKM 210
I +L L LD+ +T S V+ L L+ + +Q ++N G +
Sbjct: 558 --NIGTFDNLPKLQSLDVHSNRIT-----STSVIHDLPSLETFNAQTNLIANIGT--MDN 608
Query: 211 FPRLSFLNLAWTGVTKLPNISSLECL-------NLSFIQQVGAE---------------- 247
P L+++NL++ + L I L L N S+++ +G
Sbjct: 609 LPDLTYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDLQNNYL 668
Query: 248 --TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 305
T +L++L +L +L LNL D + LST LI+L+L + + D+S L
Sbjct: 669 NYTGTEGNLSSLSDLTNLTELNLRNNVYID-DISGLSTLSRLIYLNLDSNKIEDIS--AL 725
Query: 306 SSLSKLTNLSIRDAVLTN 323
S+L+ L L++ + + N
Sbjct: 726 SNLTNLQELTLENNKIEN 743
>gi|284800621|ref|YP_003412486.1| hypothetical protein LM5578_0368 [Listeria monocytogenes 08-5578]
gi|284993807|ref|YP_003415575.1| hypothetical protein LM5923_0367 [Listeria monocytogenes 08-5923]
gi|284056183|gb|ADB67124.1| hypothetical protein LM5578_0368 [Listeria monocytogenes 08-5578]
gi|284059274|gb|ADB70213.1| hypothetical protein LM5923_0367 [Listeria monocytogenes 08-5923]
Length = 1778
Score = 54.7 bits (130), Expect = 9e-05, Method: Composition-based stats.
Identities = 70/305 (22%), Positives = 145/305 (47%), Gaps = 46/305 (15%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
+S E + L L++L ++D +T+ + A+T + LK L L C +T G
Sbjct: 375 DSCAIEDLGTLNNLPKLQTLVLSDNENLTN--ITAITDLPQLKTLTLDGC-GITSIGT-- 429
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
L ++ LEKL L E +T+ I+ ++ L LS LD+ +T + L+ L LE+L++
Sbjct: 430 LDNLPKLEKLDLKENQITS--ISEITDLPRLSYLDVSVNNLT--TIGDLKKLPLLEWLNV 485
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGV------TKLPNISSLECLNLSF--------- 240
+++S+ + L FP L+++N++ + T+LP++ N S
Sbjct: 486 SSNRLSD--VSTLTNFPSLNYINISNNVIRTVGKMTELPSLKEFYAQNNSISDISMIHDM 543
Query: 241 --IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLF----PLSTFKELIHL---- 290
+++V A +L+ ++ NL L+ L++ +++ ++ L TF +L
Sbjct: 544 PNLRKVDASNNLITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLETFNAQTNLITNI 603
Query: 291 ----SLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS------GLGSFKPPRSLKLLDL 340
+L + + ++S +++ SL+ + +L + ++ + LG+ L++LDL
Sbjct: 604 GTMDNLPDLTYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDL 663
Query: 341 HGGWL 345
+L
Sbjct: 664 QNNYL 668
Score = 39.7 bits (91), Expect = 3.0, Method: Composition-based stats.
Identities = 62/258 (24%), Positives = 110/258 (42%), Gaps = 43/258 (16%)
Query: 94 SLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLT 153
SLN + + +T + LKE ++ ++D M H + L K+ S +T
Sbjct: 501 SLNYINISNNVIRTVGKMTELPSLKEF-YAQNNSISDISMIH--DMPNLRKVDASNNLIT 557
Query: 154 ADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQ---VSNRGAAVLKM 210
I +L L LD+ +T S V+ L L+ + +Q ++N G +
Sbjct: 558 --NIGTFDNLPKLQSLDVHSNRIT-----STSVIHDLPSLETFNAQTNLITNIGT--MDN 608
Query: 211 FPRLSFLNLAWTGVTKLPNISSLECL-------NLSFIQQVGAE---------------- 247
P L+++NL++ + L I L L N S+++ +G
Sbjct: 609 LPDLTYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDLQNNYL 668
Query: 248 --TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 305
T +L++L +L +L LNL D + LST LI+L+L + + D+S L
Sbjct: 669 NYTGTEGNLSSLSDLTNLTELNLRNNVYID-DISGLSTLSRLIYLNLDSNKIEDIS--AL 725
Query: 306 SSLSKLTNLSIRDAVLTN 323
S+L+ L L++ + + N
Sbjct: 726 SNLTNLQELTLENNKIEN 743
>gi|194383518|dbj|BAG64730.1| unnamed protein product [Homo sapiens]
Length = 339
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 153/321 (47%), Gaps = 25/321 (7%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTC-LKELDLSRCVKVTDAGMKHLL-SISTLEKLWL 147
R + LN+ C ++T S ++L+ LK LDL+ CV +T++ +K + LE L L
Sbjct: 20 RNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSITNSSLKGISEGCRNLEYLNL 79
Query: 148 SETG-LTADGI-ALLSSLQNLSVLDLGGLP-VTDLVLRSLQ-VLTKLEYLDLWG-SQVSN 202
S +T DGI AL+ + L L L G + D L+ +Q +L L+L S++++
Sbjct: 80 SWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKHIQNYCHELVSLNLQSCSRITD 139
Query: 203 RGAA-VLKMFPRLSFLNLAWTGVTKLPNIS----SLECLNLSFIQQVGAE--TDLVLSLT 255
G + + RL L L +G + L + S L C L ++ TD +L
Sbjct: 140 EGVVQICRGCHRLQALCL--SGCSNLTDASLTALGLNCPRLQILEAARCSHLTDAGFTLL 197
Query: 256 ALQNLNHLERLNLEQTQ-VSDATLFPLSTF-KELIHLSLRNASL-TDVSLHQLSSLS--- 309
A +N + LE+++LE+ ++D+TL LS +L LSL + L TD + LS+ +
Sbjct: 198 A-RNCHELEKMDLEECILITDSTLIQLSIHCPKLQALSLSHCELITDDGILHLSNSTCGH 256
Query: 310 -KLTNLSIRDAVL-TNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHEL 367
+L L + + +L T+ L + R L+ L+L+ +T I + P ++V
Sbjct: 257 ERLRVLELDNCLLITDVALEHLENCRGLERLELYDCQQVTRAGIKRMRAQLPHVKVHAYF 316
Query: 368 SVICPSDQIGSNGPSPSRTSL 388
+ + P + +G R +
Sbjct: 317 APVTPPTAVAGSGQRLCRCCV 337
>gi|423647357|ref|ZP_17622927.1| hypothetical protein IKA_01144 [Bacillus cereus VD169]
gi|401286175|gb|EJR92008.1| hypothetical protein IKA_01144 [Bacillus cereus VD169]
Length = 760
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 116/239 (48%), Gaps = 37/239 (15%)
Query: 88 AFRY---LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEK 144
A +Y L+SL VA+ + + + +A LK+L+ A + L+ + LE
Sbjct: 237 ALKYMPNLKSLTVANAK-IKDPSFFA-----NLKQLNHLALRGNEFADVTPLVKMDNLES 290
Query: 145 LWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG 204
L LS +T +A L+ ++N+ L L G + D+ +L + +L+YL+L ++++N
Sbjct: 291 LDLSNNKIT--NVAPLTEMKNVKSLYLSGNQIEDVT--ALAKMEQLDYLNLANNKITN-- 344
Query: 205 AAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLS------LTALQ 258
A L +++L LA ++ +I +L L L TDLVL+ L+ ++
Sbjct: 345 VAPLSALKNVTYLTLAGN---QIEDIKALYSLPL---------TDLVLTRNKVKDLSGIE 392
Query: 259 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 317
+ LE L + + ++ D T PLS +L L L N L D++ LSSL L L +
Sbjct: 393 QMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT--PLSSLVNLQKLDLE 447
>gi|290972876|ref|XP_002669176.1| predicted protein [Naegleria gruberi]
gi|284082720|gb|EFC36432.1| predicted protein [Naegleria gruberi]
Length = 390
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 113/260 (43%), Gaps = 26/260 (10%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
G +YL SL++++ + ++ + + LKELD+S +T+ G+ + S L KL
Sbjct: 23 FGELKYLTSLDISN-KHLSDEYIATIGNWDTLKELDVSLNSDITERGIGIISEKSLLNKL 81
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+ ++ G L+S ++NL+ L++ T L + ++ ++++E L +N G
Sbjct: 82 SVHSMTISTKGFELISRMKNLTDLNI---MQTVLDIEKIKFISEMEQLTAIDISFNNIGT 138
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L + +L L + N + I GA+ +++L HL
Sbjct: 139 DELGLICKLEKLRILKA--------------NGNQINSDGAK--------LIKDLKHLTH 176
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 325
L++ Q+ + + + L HL++ + + D L + L +L LSI D + G
Sbjct: 177 LSINNNQIGKEGVKCIGELEHLTHLAVGSNRIKDKGLKYIGRLQRLNFLSIYDNGIKGKG 236
Query: 326 LGSFKPPRSLKLLDLHGGWL 345
+ L LD+H +
Sbjct: 237 VKYLSSLSRLVTLDIHSNGI 256
>gi|421610748|ref|ZP_16051914.1| leucine-rich repeat domain protein [Rhodopirellula baltica SH28]
gi|408498532|gb|EKK03025.1| leucine-rich repeat domain protein [Rhodopirellula baltica SH28]
Length = 341
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 92/205 (44%), Gaps = 22/205 (10%)
Query: 130 DAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK 189
DA K + + L + +T +T DG ++L+ L L + L PVTD L S+ L K
Sbjct: 131 DAKAKSISGLPALVAVTFQDTSVTDDGASVLAELNELQDVSLMNSPVTDKTLASISTLPK 190
Query: 190 LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSFIQQV 244
L L+L G++++ + P L L LA T G+ + NI LE +NL ++ ++
Sbjct: 191 LTKLNLRGTKITGEAFEPISKLP-LESLELAETDFGPEGMPAIANIEGLEKINL-WLTKI 248
Query: 245 GAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS--- 301
E SL A + L LN++ P+ L HL L + T VS
Sbjct: 249 DNE-----SLKAFEGKTSLTVLNVDNCPAITEEAIPV--IVSLPHLKLLHLGKTSVSPDA 301
Query: 302 LHQLSSLSKLTNLSIRDAVLTNSGL 326
L QL L +L L + TN GL
Sbjct: 302 LPQLKPLQELETLFV-----TNLGL 321
>gi|283777859|ref|YP_003368614.1| serine/threonine protein kinase [Pirellula staleyi DSM 6068]
gi|283436312|gb|ADB14754.1| serine/threonine protein kinase [Pirellula staleyi DSM 6068]
Length = 1487
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 118/268 (44%), Gaps = 9/268 (3%)
Query: 101 RRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALL 160
R VT S L +L L++L L+ +TD G+ L + +L KL L+ T +T G+ L
Sbjct: 681 RGVTDSDLASLELAPGLRQLSLA-ATPITDTGIASLAKLKSLAKLSLARTAITNKGLESL 739
Query: 161 SSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA 220
+ L L+ LDL +TD L L L+KLE L L + +S+ G L M L L +
Sbjct: 740 ARLSQLAELDLSSTKITDQGLTRLLALSKLERLYLSDNSLSDNGLEQLAMAKSLRLLVAS 799
Query: 221 WTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATL-- 278
T +++ + L + I GA+ ++L L+ L ++ V
Sbjct: 800 GTMLSERGHGVLTAALPQTEITWDGADMQRQVALVLLERGARLSVADMRGNIVPVVARRE 859
Query: 279 -FPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKL 337
P+ K L ++ D L L +L+ L +L++ +T +GL + SLK
Sbjct: 860 DLPIGRLKVLKVDFAGCRTIGDDDLKPLVALADLESLALSGTKITPAGLANLHGLASLKS 919
Query: 338 LDLHGGWLLTED-----AILQFCKMHPR 360
+DL L T A L CK+ R
Sbjct: 920 IDLGTLPLTTASVETLAAALPDCKIERR 947
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 30/187 (16%)
Query: 177 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
T+L SL++L +D G V++ A L++ P L L+LA T +T
Sbjct: 664 TELPAESLEILA----IDFEGRGVTDSDLASLELAPGLRQLSLAATPITDT--------- 710
Query: 237 NLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 296
+ +L L L +L+L +T +++ L L+ +L L L +
Sbjct: 711 ----------------GIASLAKLKSLAKLSLARTAITNKGLESLARLSQLAELDLSSTK 754
Query: 297 LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 356
+TD L +L +LSKL L + D L+++GL +SL+LL + G +L+E
Sbjct: 755 ITDQGLTRLLALSKLERLYLSDNSLSDNGLEQLAMAKSLRLL-VASGTMLSERGHGVLTA 813
Query: 357 MHPRIEV 363
P+ E+
Sbjct: 814 ALPQTEI 820
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 71/146 (48%), Gaps = 4/146 (2%)
Query: 84 AYLGAFRY---LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
A L FR L+ LN+++ +T L A+ MT L LD+S C V+DAG+K L ++
Sbjct: 1294 AGLANFRSASSLQELNLSNTM-LTDPNLAAIAPMTSLISLDMSACRGVSDAGLKKLAGLT 1352
Query: 141 TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 200
L L L T LT L+S L LDL + D + L LT L L L + V
Sbjct: 1353 QLRSLGLRGTKLTDAAAESLASYAKLEQLDLDSTSIGDSGVEKLLSLTSLRRLVLAKTSV 1412
Query: 201 SNRGAAVLKMFPRLSFLNLAWTGVTK 226
++ G A L L ++L T VT+
Sbjct: 1413 TDGGVASLAKLKDLRSVSLVRTSVTE 1438
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 117/254 (46%), Gaps = 22/254 (8%)
Query: 140 STLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQ 199
S LE L LS+T +T +A + L+ L L L L +TD L L L LE LD+ G +
Sbjct: 1231 SELESLRLSDTAITDADLAAIGKLKLLKKLYLANLAITDDGLAKLAELELLEVLDVSGGR 1290
Query: 200 VSNRGAAVLKMFPRLSFLNLAWTGVTKLPN------ISSLECLNLSFIQQVGAETDLVLS 253
++ G A + L LNL+ T +T PN ++SL L++S + V
Sbjct: 1291 ITGAGLANFRSASSLQELNLSNTMLTD-PNLAAIAPMTSLISLDMSACRGVSDA-----G 1344
Query: 254 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 313
L L L L L L T+++DA L+++ +L L L + S+ D + +L SL+ L
Sbjct: 1345 LKKLAGLTQLRSLGLRGTKLTDAAAESLASYAKLEQLDLDSTSIGDSGVEKLLSLTSLRR 1404
Query: 314 LSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL----LTEDAILQFCKMHPRIEVWHELSV 369
L + +T+ G+ S KL DL L +TE A + K P V +
Sbjct: 1405 LVLAKTSVTDGGVASLA-----KLKDLRSVSLVRTSVTEAACTELEKAIPGCVVLKP-AQ 1458
Query: 370 ICPSDQIGSNGPSP 383
P+D G+N P
Sbjct: 1459 RPPADNSGNNAAGP 1472
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 112/283 (39%), Gaps = 76/283 (26%)
Query: 119 ELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTD 178
++D + C + D +K L++++ LE L LS T +T G+A L L +L +DLG LP+T
Sbjct: 870 KVDFAGCRTIGDDDLKPLVALADLESLALSGTKITPAGLANLHGLASLKSIDLGTLPLTT 929
Query: 179 LVLRSLQVL---TKLE------------YLDLWG--SQVSNRGAAVLKMFPRLSFLNLAW 221
+ +L K+E L + G + S+ A+ +++ + L A
Sbjct: 930 ASVETLAAALPDCKIERREPADKLVARWVLSVGGKCTITSDESASQVELTSATTVLPEAA 989
Query: 222 TGVTKL-----------PNISSLECLNLSFIQQVGAE-TDLVLSLTA------------- 256
V K+ P S E NL + VG++ TD L+ A
Sbjct: 990 IHVEKINLTDCKIGPDAPLASIAELANLKSLLLVGSDITDAQLTSIAGLKSLSELSLSDT 1049
Query: 257 ----------LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS--------------- 291
L L L+RL L T+V L ++ +L HLS
Sbjct: 1050 AVTAPAVNGLLAQLPQLQRLYLSGTKVDRGVLVAVTNLPKLSHLSLAGIEVAPSDLSLLK 1109
Query: 292 ---------LRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 325
L + L+D + QL LS L L++ LT++G
Sbjct: 1110 KCPQLEWLDLSSTGLSDEASQQLVGLSSLRELAVPKNPLTDAG 1152
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 1/119 (0%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+A + L SL+++ CR V+ + L L G+T L+ L L R K+TDA + L S + L
Sbjct: 1320 LAAIAPMTSLISLDMSACRGVSDAGLKKLAGLTQLRSLGL-RGTKLTDAAAESLASYAKL 1378
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVS 201
E+L L T + G+ L SL +L L L VTD + SL L L + L + V+
Sbjct: 1379 EQLDLDSTSIGDSGVEKLLSLTSLRRLVLAKTSVTDGGVASLAKLKDLRSVSLVRTSVT 1437
>gi|46447627|ref|YP_008992.1| hypothetical protein pc1993, partial [Candidatus Protochlamydia
amoebophila UWE25]
gi|46401268|emb|CAF24717.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 129
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 2/107 (1%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ ++L N DA +A+L L L +++C +T + L LT + L++L+LS C K
Sbjct: 2 QHLDLWCTNITDA-GLAHLKPLVTLTHLRLSECDNLTDAGLAHLTPLVALQQLNLSGCKK 60
Query: 128 VTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGG 173
+TDAG+ HL S+ L++L LS LT G+A L+ L L L+L G
Sbjct: 61 LTDAGLAHLTSLVALQQLNLSGCKKLTDAGLAHLTPLVALQHLELTG 107
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 43/74 (58%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ + L G + +A+L + L+ LN++ C+++T + L LT + L+ L+L+ C
Sbjct: 51 QQLNLSGCKKLTDAGLAHLTSLVALQQLNLSGCKKLTDAGLAHLTPLVALQHLELTGCYN 110
Query: 128 VTDAGMKHLLSIST 141
TDAG++ +++T
Sbjct: 111 FTDAGLERFKTLAT 124
Score = 41.2 bits (95), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 13/133 (9%)
Query: 190 LEYLDLWGSQVSNRGAAVLKMFPRLSFL------NLAWTGVTKLPNISSLECLNLSFIQQ 243
+++LDLW + +++ G A LK L+ L NL G+ L + +L+ LNLS ++
Sbjct: 1 MQHLDLWCTNITDAGLAHLKPLVTLTHLRLSECDNLTDAGLAHLTPLVALQQLNLSGCKK 60
Query: 244 VGAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHLSLRNA-SLTDVS 301
+ TD L L +L L++LNL +++DA L L+ L HL L + TD
Sbjct: 61 L---TD--AGLAHLTSLVALQQLNLSGCKKLTDAGLAHLTPLVALQHLELTGCYNFTDAG 115
Query: 302 LHQLSSLSKLTNL 314
L + +L+ NL
Sbjct: 116 LERFKTLATSPNL 128
>gi|388498858|gb|AFK37495.1| unknown [Lotus japonicus]
Length = 357
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 26/160 (16%)
Query: 90 RYLRSLNVADCRRVTSSAL-WALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+++ LN++ C+++T + + L+ L+L+RC+KVTD G+K LL
Sbjct: 167 KHIVDLNISGCKQITDQGIQFVAENYPELESLNLTRCIKVTDDGLKPLLHQCL------- 219
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAV 207
SLQ+L++ L TD R + +LT+L++LDL G+Q +S++G
Sbjct: 220 -------------SLQSLNLYALSSF--TDAAYREISLLTRLKFLDLCGAQNLSDQGLHC 264
Query: 208 LKMFPRLSFLNLAW-TGVTKLPNISSLECL-NLSFIQQVG 245
+ L LNL W VT I+ +C +L F+ G
Sbjct: 265 ISKCKDLVSLNLTWCVRVTDEGVIAVAQCCTSLEFLSLFG 304
>gi|320164611|gb|EFW41510.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 853
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 148/334 (44%), Gaps = 48/334 (14%)
Query: 43 DSLLRHLIRRRLI-------FPSLLEVFKHNAEAIELRGE--NSVDAEWMAYLGAFRYLR 93
D+L R + LI FPSL + + N L+G S+ A L A R+L
Sbjct: 106 DALTRLDLSSNLITSISASAFPSLTALTELN-----LQGNLITSIPASLFTGLTALRWLP 160
Query: 94 SLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLT 153
N ++TS A A G++ + + L + ++TD ++ L +L+L +T
Sbjct: 161 LSN----NQITSIAANAFNGLSAVTLIYL-QTNQITDLSPATFTGLAALTELYLMGNQIT 215
Query: 154 ---ADGIALLSSLQNLSVLD----------------LGGLP-----VTDLVLRSLQVLTK 189
A A L+SL+NL + D L GL +T++ + LT
Sbjct: 216 SIHASTFAGLTSLENLDLQDNKITEVPASAFTDLSALTGLTLQDNQITEIPASAFAGLTV 275
Query: 190 LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETD 249
LE L+L G+Q++N V L LNL +T +P + +L+ ++ + + +
Sbjct: 276 LEILNLQGNQITNIPETVFADLTALETLNLQDNQITSIP---ASAFADLTALRSLDLQDN 332
Query: 250 LVLSLTA--LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 307
+ S+ A L+ L L L +++D + ++ L L L++ +T++S + +
Sbjct: 333 NITSIPASVFTGLSALNELKLHTNKITDLSASVFASLTALAVLELQSNQITEISANAFTG 392
Query: 308 LSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 341
L+ LT L + +T+ + +F +L+ L LH
Sbjct: 393 LTALTKLDLSSCQITSFSVDAFTSLTALRDLYLH 426
>gi|386042670|ref|YP_005961475.1| internalin [Listeria monocytogenes 10403S]
gi|404409572|ref|YP_006695160.1| internalin I [Listeria monocytogenes SLCC5850]
gi|345535904|gb|AEO05344.1| internalin [Listeria monocytogenes 10403S]
gi|404229398|emb|CBY50802.1| internalin I (LPXTG motif) [Listeria monocytogenes SLCC5850]
Length = 1778
Score = 54.7 bits (130), Expect = 1e-04, Method: Composition-based stats.
Identities = 70/305 (22%), Positives = 145/305 (47%), Gaps = 46/305 (15%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
+S E + L L++L ++D +T+ + A+T + LK L L C +T G
Sbjct: 375 DSCAIEDLGTLNNLPKLQTLVLSDNENLTN--ITAITDLPQLKTLTLDGC-GITSIGT-- 429
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
L ++ LEKL L E +T+ I+ ++ L LS LD+ +T + L+ L LE+L++
Sbjct: 430 LDNLPKLEKLDLKENQITS--ISEITDLPRLSYLDVSVNNLT--TIGDLKKLPLLEWLNV 485
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGV------TKLPNISSLECLNLSF--------- 240
+++S+ + L FP L+++N++ + T+LP++ N S
Sbjct: 486 SSNRLSD--VSTLTNFPSLNYINISNNVIRTVGKMTELPSLKEFYAQNNSISDISMIHDM 543
Query: 241 --IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLF----PLSTFKELIHL---- 290
+++V A +L+ ++ NL L+ L++ +++ ++ L TF +L
Sbjct: 544 PNLRKVDASNNLITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLETFNAQANLITNI 603
Query: 291 ----SLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS------GLGSFKPPRSLKLLDL 340
+L + + ++S +++ SL+ + +L + ++ + LG+ L++LDL
Sbjct: 604 GTMDNLPDITYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDL 663
Query: 341 HGGWL 345
+L
Sbjct: 664 QNNYL 668
Score = 39.3 bits (90), Expect = 3.8, Method: Composition-based stats.
Identities = 59/255 (23%), Positives = 108/255 (42%), Gaps = 37/255 (14%)
Query: 94 SLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLT 153
SLN + + +T + LKE ++ ++D M H + L K+ S +T
Sbjct: 501 SLNYINISNNVIRTVGKMTELPSLKEF-YAQNNSISDISMIH--DMPNLRKVDASNNLIT 557
Query: 154 ADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPR 213
I +L L LD+ +T + + L LE + + ++N G + P
Sbjct: 558 --NIGTFDNLPKLQSLDVHSNRITSTSV--IHDLPSLETFNAQANLITNIGT--MDNLPD 611
Query: 214 LSFLNLAWTGVTKLPNISSLECL-------NLSFIQQVGAE------------------T 248
++++NL++ + L I L L N S+++ +G T
Sbjct: 612 ITYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDLQNNYLNYT 671
Query: 249 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 308
+L++L +L +L LNL D + LST LI+L+L + + D+S LS+L
Sbjct: 672 GTEGNLSSLSDLTNLTELNLRNNVYID-DISGLSTLSRLIYLNLDSNKIEDIS--ALSNL 728
Query: 309 SKLTNLSIRDAVLTN 323
+ L L++ + + N
Sbjct: 729 TNLQELTLENNKIEN 743
>gi|404412424|ref|YP_006698011.1| internalin I [Listeria monocytogenes SLCC7179]
gi|404238123|emb|CBY59524.1| internalin I (LPXTG motif) [Listeria monocytogenes SLCC7179]
Length = 1783
Score = 54.7 bits (130), Expect = 1e-04, Method: Composition-based stats.
Identities = 70/305 (22%), Positives = 145/305 (47%), Gaps = 46/305 (15%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
+S E + L L++L ++D +T+ + A+T + LK L L C +T G
Sbjct: 375 DSCAIEDLGTLNNLPKLQTLVLSDNENLTN--ITAITDLPQLKTLTLDGC-GITSIGT-- 429
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
L ++ LEKL L E +T+ I+ ++ L LS LD+ +T + L+ L LE+L++
Sbjct: 430 LDNLPKLEKLDLKENQITS--ISEITDLPRLSYLDVSVNNLT--TIGDLKKLPLLEWLNV 485
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGV------TKLPNISSLECLNLSF--------- 240
+++S+ + L FP L+++N++ + T+LP++ N S
Sbjct: 486 SSNRLSD--VSTLTNFPSLNYINISNNVIRTVGKMTELPSLKEFYAQNNSISDISMIHDM 543
Query: 241 --IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLF----PLSTFKELIHL---- 290
+++V A +L+ ++ NL L+ L++ +++ ++ L TF +L
Sbjct: 544 PNLRKVDASNNLITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLETFNAQTNLITNI 603
Query: 291 ----SLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS------GLGSFKPPRSLKLLDL 340
+L + + ++S +++ SL+ + +L + ++ + LG+ L++LDL
Sbjct: 604 GTMDNLPDLTYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDL 663
Query: 341 HGGWL 345
+L
Sbjct: 664 QNNYL 668
Score = 39.7 bits (91), Expect = 3.3, Method: Composition-based stats.
Identities = 62/258 (24%), Positives = 110/258 (42%), Gaps = 43/258 (16%)
Query: 94 SLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLT 153
SLN + + +T + LKE ++ ++D M H + L K+ S +T
Sbjct: 501 SLNYINISNNVIRTVGKMTELPSLKEF-YAQNNSISDISMIH--DMPNLRKVDASNNLIT 557
Query: 154 ADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQ---VSNRGAAVLKM 210
I +L L LD+ +T S V+ L L+ + +Q ++N G +
Sbjct: 558 --NIGTFDNLPKLQSLDVHSNRIT-----STSVIHDLPSLETFNAQTNLITNIGT--MDN 608
Query: 211 FPRLSFLNLAWTGVTKLPNISSLECL-------NLSFIQQVGAE---------------- 247
P L+++NL++ + L I L L N S+++ +G
Sbjct: 609 LPDLTYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDLQNNYL 668
Query: 248 --TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 305
T +L++L +L +L LNL D + LST LI+L+L + + D+S L
Sbjct: 669 NYTGTEGNLSSLSDLTNLTELNLRNNVYID-DISGLSTLSRLIYLNLDSNKIEDIS--AL 725
Query: 306 SSLSKLTNLSIRDAVLTN 323
S+L+ L L++ + + N
Sbjct: 726 SNLTNLQELTLENNKIEN 743
>gi|238008968|gb|ACR35519.1| unknown [Zea mays]
Length = 520
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 143/298 (47%), Gaps = 39/298 (13%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMT-CLKELDLSRCVKVTDAGMKHLL-SIS 140
MA + LR ++V C VT AL ++ LK+L L +C V+DAG+K S
Sbjct: 219 MANAAGLQNLRCMSVTSCPGVTDLALASIAKFCPSLKKLYLRKCGHVSDAGLKAFTESAK 278
Query: 141 TLEKLWLSETG-LTADGI-ALLSSLQNLSVLDL-GGLPVTDLV-------LRSLQVLTKL 190
E L L E +T GI A L+ Q L L + + D+ RSL+ LT
Sbjct: 279 VFENLQLEECNRVTLVGILAFLNCSQKFRALSLVKCMGIKDICSVPQLPFCRSLRFLT-- 336
Query: 191 EYLDLWGSQVSNRGAAVLKMF-PRLSFLNLAWTG-VTK---LPNISSLEC----LNLSFI 241
D G +N AV+ M P+L ++L+ G VT LP I S E ++LS
Sbjct: 337 -IKDCPG--FTNASLAVVGMICPQLEQVDLSGLGEVTDNGLLPLIQSSESGLIKVDLSGC 393
Query: 242 QQVGAETDLVLSLTALQNLNHLERLNLEQ-TQVSDATLFPLS-TFKELIHLSLRNASLTD 299
+ + TD+ +S ++ L++++LE ++++DA+LF +S + EL L L N ++D
Sbjct: 394 KNI---TDVAVSSLVKRHGKSLKKVSLEGCSKITDASLFTMSESCTELAELDLSNCMVSD 450
Query: 300 VSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKM 357
+ L+S +L +R VL+ SG S +S+ L G L E LQFC M
Sbjct: 451 YGVAMLASAR---HLKLR--VLSLSGC-SKVTQKSVPFLGNLGQSL--EGLNLQFCNM 500
>gi|307215039|gb|EFN89866.1| F-box/LRR-repeat protein 14 [Harpegnathos saltator]
Length = 457
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 106/218 (48%), Gaps = 31/218 (14%)
Query: 70 IELRGENSVDAEWMAYLGAFR-------YLRSLNVADCRRVTSSALWALT-GMTCLKELD 121
++LR V + +AYL L L++ DC+R++ AL ++ G+T LK ++
Sbjct: 238 LDLRSCWHVSDQGIAYLAGLNREADGNLALEHLSLQDCQRLSDEALRNVSLGLTTLKSIN 297
Query: 122 LSRCVKVTDAGMKHLLSISTLEKLWL------SETGLT--ADGIALLSSLQNLSVLDLGG 173
LS CV +TD+G+KHL +S+L +L L S+ G+ A+G + ++SL ++S D
Sbjct: 298 LSFCVCITDSGVKHLARMSSLRELNLRSCDNISDIGMAYLAEGGSRITSL-DVSFCD--- 353
Query: 174 LPVTDLVLRSL-QVLTKLEYLDLWGSQVSNRG-AAVLKMFPRLSFLNLAWTGV------- 224
+ D L + Q L L+ L L Q+S+ G + K L LN+
Sbjct: 354 -KIGDQALVHISQGLFNLKSLSLSACQISDEGICKIAKTLHDLETLNIGQCSRLTDRSLH 412
Query: 225 TKLPNISSLECLNLSFIQQVGAET-DLVLSLTALQNLN 261
T N+ L+C++L ++ + ++ L L LN
Sbjct: 413 TMAENMKHLKCIDLYGCTKITTSGLERIMKLPQLSTLN 450
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 115/233 (49%), Gaps = 38/233 (16%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWL 147
+ L L + C +T++ L + G+ LK LDL C V+D G+ +L ++
Sbjct: 206 LKNLEHLELGGCCNITNTGLMVIAWGLKKLKRLDLRSCWHVSDQGIAYLAGLNR------ 259
Query: 148 SETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV-LTKLEYLDL-WGSQVSNRGA 205
ADG +L++LS+ D L +D LR++ + LT L+ ++L + +++ G
Sbjct: 260 -----EADGNL---ALEHLSLQDCQRL--SDEALRNVSLGLTTLKSINLSFCVCITDSG- 308
Query: 206 AVLKMFPRLSFL---------NLAWTGVTKLPNISS-LECLNLSFIQQVGAETDLVLSLT 255
+K R+S L N++ G+ L S + L++SF ++G + + +S
Sbjct: 309 --VKHLARMSSLRELNLRSCDNISDIGMAYLAEGGSRITSLDVSFCDKIGDQALVHIS-- 364
Query: 256 ALQNLNHLERLNLEQTQVSDATLFPLS-TFKELIHLSLRNAS-LTDVSLHQLS 306
Q L +L+ L+L Q+SD + ++ T +L L++ S LTD SLH ++
Sbjct: 365 --QGLFNLKSLSLSACQISDEGICKIAKTLHDLETLNIGQCSRLTDRSLHTMA 415
>gi|327287577|ref|XP_003228505.1| PREDICTED: insulin-like growth factor-binding protein complex acid
labile subunit-like [Anolis carolinensis]
Length = 612
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 103/248 (41%), Gaps = 6/248 (2%)
Query: 102 RVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLS 161
++++ A A GM L+ LDLS ++ L +S+L L LS + G
Sbjct: 259 QISAVAPRAFVGMKSLRWLDLSHN-RLATLFEDTFLGLSSLRVLRLSSNSIAGLGPRTFK 317
Query: 162 SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW 221
L +L L LG + L+ R L +L+ L L +Q+ A +++ +NL+
Sbjct: 318 DLHSLEELQLGHNRIRSLLERGFDKLGQLDVLALNDNQIEEVRAGAFLGLSKVAVMNLSG 377
Query: 222 TGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTAL--QNLNHLERLNLEQTQVSDATLF 279
LP+ + L+ + + E + + L NL+ L RL L +S
Sbjct: 378 NCFKTLPDFT---FTGLNQLHSLHLENSCLTRIRPLVFSNLSSLRRLFLRHNGISTIEEH 434
Query: 280 PLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 339
L ELI L LR+ L +S +Q S L L L + L +F P + L LD
Sbjct: 435 SLDNLHELIDLDLRHNRLVRLSPNQFSGLRNLEYLLLSSNQLLEISPEAFAPLQRLSWLD 494
Query: 340 LHGGWLLT 347
L L T
Sbjct: 495 LSNNGLET 502
>gi|170757260|ref|YP_001781332.1| hypothetical protein CLD_2856 [Clostridium botulinum B1 str. Okra]
gi|169122472|gb|ACA46308.1| leucine rich repeat protein [Clostridium botulinum B1 str. Okra]
Length = 1359
Score = 54.3 bits (129), Expect = 1e-04, Method: Composition-based stats.
Identities = 69/275 (25%), Positives = 129/275 (46%), Gaps = 34/275 (12%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N +I+++G + ++ LG YL ++A+ V L +L L++LD++ C
Sbjct: 491 NLSSIKIQGNLLNEINNISILGKLEYL---SIANTNVVNIDVLRSLVN---LRKLDITGC 544
Query: 126 VKVTDAGMKHLLSISTL--EKLWLSETGLTADGIALLSS---------LQNLSVLDLGGL 174
K+ + HL + + E + + L + L+++ L +++ L+L G
Sbjct: 545 TKIDTQVLNHLSDVEIIGNEIVTFGDKVLEREIRELINNYSEPIYKRQLLSITKLELSGR 604
Query: 175 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLE 234
+ D L+ L+ + L YLDL +++SN + +K L L L + + I SL
Sbjct: 605 GIVD--LQGLESMENLIYLDLSNNEISNIDS--IKKLINLKKLVLHKNKIGSIKVIESLT 660
Query: 235 CLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 294
L +++ +L+ +TAL L+ L RL+L + + ++ L L +LSL
Sbjct: 661 KL-----EELDLSNNLIGDITALGGLSQLTRLDLSRNGI--VSINSLGGLINLQYLSLYE 713
Query: 295 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 329
+++ + SL KL NL R+ L NSG+ +F
Sbjct: 714 NKISE----REESLKKLYNL--RELYLKNSGISNF 742
Score = 47.8 bits (112), Expect = 0.012, Method: Composition-based stats.
Identities = 55/168 (32%), Positives = 84/168 (50%), Gaps = 10/168 (5%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N +I LRG + E + L R L L++ R V +L+ + +T LK L L+
Sbjct: 833 NLHSINLRGHGKL--EGLENLMPLRGLIKLDLQG-REVNYISLYYINYLTSLKYLYLNNM 889
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
D + L +++ L L LS TG++ I++LS L+NL+ L LGG +TD L L+
Sbjct: 890 NLTGD--LSFLENLTDLRVLDLSRTGIS--NISILSKLRNLNELYLGGNKITD--LSYLE 943
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 233
LT L LDL G+ A L+ L +L L T K+ + S++
Sbjct: 944 NLTNLIKLDLVGNNDITSIYA-LRNLINLRYLTLPITNPKKIQDYSAV 990
Score = 47.0 bits (110), Expect = 0.020, Method: Composition-based stats.
Identities = 48/182 (26%), Positives = 92/182 (50%), Gaps = 18/182 (9%)
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
+++ LEKL LS T + I+LL L NL +++ ++D+ +L+ + YL+L
Sbjct: 375 NMTALEKLNLSGTDIK--DISLLKYLTNLREVNISNTSISDIT--ALESSIYIRYLNLNK 430
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTAL 257
++++ V+K F + L ++ T ++ +PN++SL L+LS +L +
Sbjct: 431 TEITT--LEVIKKFEHIEKLYVSGTKISTIPNLNSLMELDLS-------NCNLTSNNFLS 481
Query: 258 QNLNHLERLNLEQTQVSDATLFP---LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 314
N ++L LNL ++ L +S +L +LS+ N ++ ++ + L SL L L
Sbjct: 482 SNFSNLVYLNLSSIKIQGNLLNEINNISILGKLEYLSIANTNVVNIDV--LRSLVNLRKL 539
Query: 315 SI 316
I
Sbjct: 540 DI 541
>gi|423629712|ref|ZP_17605460.1| hypothetical protein IK5_02563 [Bacillus cereus VD154]
gi|401266846|gb|EJR72915.1| hypothetical protein IK5_02563 [Bacillus cereus VD154]
Length = 760
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 115/234 (49%), Gaps = 36/234 (15%)
Query: 88 AFRY---LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEK 144
A +Y L+SL VA+ + + + +A LK+L+ A + L+ + LE
Sbjct: 237 ALKYMPNLKSLTVANAK-IKDPSFFA-----NLKQLNHLALRGNEFADVTPLVKMDNLES 290
Query: 145 LWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG 204
L LS +T +A L+ ++N+ L L G + D+ +L + +L+YL+L ++++N
Sbjct: 291 LDLSNNKIT--NVAPLTEMKNVKSLFLSGNQIEDVT--ALAKMEQLDYLNLANNKITN-- 344
Query: 205 AAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLS------LTALQ 258
A L +++L LA ++ +I +L L L TDLVL+ L+ ++
Sbjct: 345 VAPLSALKNVTYLTLAGN---QIEDIKALYSLPL---------TDLVLTRNKVKDLSGIE 392
Query: 259 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS-LHQLSSLSKL 311
+ LE L + + ++ D T PLS +L L L N L D++ L L +L KL
Sbjct: 393 QMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDITPLSSLVNLQKL 444
>gi|426357394|ref|XP_004046027.1| PREDICTED: F-box/LRR-repeat protein 13 [Gorilla gorilla gorilla]
Length = 440
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 121/253 (47%), Gaps = 19/253 (7%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKL-WLSETGLTADGIALLSSLQNLSVLDLGGLP 175
L+ L L+ C + TD G+++L + KL +L +G T AL+ ++ L G P
Sbjct: 36 LQNLSLAYCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQ---ALVEKCSRITSLVFTGAP 92
Query: 176 -VTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVL-KMFPRLSFLNLA-WTGVT-----K 226
++D R+L KL + G++ V++ + K +P LS + +A G+T
Sbjct: 93 HISDCTFRALSA-CKLRKIRFEGNKRVTDASFKFIDKNYPNLSHIYMADCKGITDSSLRS 151
Query: 227 LPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQ-TQVSDATLFPLST-F 284
L + L LNL+ ++G + L L ++ + LNL ++SDA++ LS
Sbjct: 152 LSPLKQLTVLNLANCVRIG-DMGLKQFLDGPASI-RIRELNLSNCVRLSDASVMKLSERC 209
Query: 285 KELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGG 343
L +LSLRN LT + + ++ L ++ + ++N GL + LK L +
Sbjct: 210 PNLNYLSLRNCEHLTAQGIGYIVNIFSLVSIDLSGTDISNEGLNVLSRHKKLKELSVSEC 269
Query: 344 WLLTEDAILQFCK 356
+ +T+D I FCK
Sbjct: 270 YRITDDGIQAFCK 282
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 110/236 (46%), Gaps = 19/236 (8%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV 128
I G V DA + + L + +ADC+ +T S+L +L+ + L L+L+ CV++
Sbjct: 110 IRFEGNKRVTDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRI 169
Query: 129 TDAGMKHLLSIST---LEKLWLSETGLTADG--IALLSSLQNLSVLDLGGLP-VTDLVLR 182
D G+K L + +L LS +D + L NL+ L L +T +
Sbjct: 170 GDMGLKQFLDGPASIRIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIG 229
Query: 183 SLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT------GVTKLPNIS-SLEC 235
+ + L +DL G+ +SN G VL +L L+++ G+ S LE
Sbjct: 230 YIVNIFSLVSIDLSGTDISNEGLNVLSRHKKLKELSVSECYRITDDGIQAFCKSSLILEH 289
Query: 236 LNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHL 290
L++S+ Q+ +D+++ A+ +N L L++ +++D+ + LS +H+
Sbjct: 290 LDVSYCSQL---SDMIIKALAIYCIN-LTSLSIAGCPKITDSAMEMLSAKCHYLHI 341
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 89/183 (48%), Gaps = 21/183 (11%)
Query: 69 AIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMT-CLKELDLSRCVK 127
+I+L G + + E + L + L+ L+V++C R+T + A + L+ LD+S C +
Sbjct: 239 SIDLSGTD-ISNEGLNVLSRHKKLKELSVSECYRITDDGIQAFCKSSLILEHLDVSYCSQ 297
Query: 128 VTDAGMKHLLSISTLEKLWLSETG---LTADGIALLSS-LQNLSVLDLGG-LPVTDLVLR 182
++D +K L+I + LS G +T + +LS+ L +LD+ G + +TD +L
Sbjct: 298 LSDMIIK-ALAIYCINLTSLSIAGCPKITDSAMEMLSAKCHYLHILDISGCVLLTDQILE 356
Query: 183 SLQV------LTKLEYLDLWGSQVSNRGAAVLKMF-------PRLSFLNLAWTGVTKLPN 229
LQ+ + K++Y + + R ++ ++ PR + VT L N
Sbjct: 357 DLQIGCKQLRILKMQYCTNISKKAAQRMSSKVQQQEYNTNDPPRWFGYDREGNPVTDLDN 416
Query: 230 ISS 232
I+S
Sbjct: 417 ITS 419
>gi|417302467|ref|ZP_12089567.1| conserved hypothetical protein, secreted [Rhodopirellula baltica
WH47]
gi|327541207|gb|EGF27751.1| conserved hypothetical protein, secreted [Rhodopirellula baltica
WH47]
Length = 341
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 92/205 (44%), Gaps = 22/205 (10%)
Query: 130 DAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK 189
DA K + + L + +T +T DG ++L+ L L + L PVTD L S+ L K
Sbjct: 131 DAKAKSISGLPALVAVTFQDTSVTDDGASVLAELNELQDVSLMNSPVTDKTLASISTLPK 190
Query: 190 LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSFIQQV 244
L L+L G++++ + P L L LA T G+ + NI LE +NL ++ ++
Sbjct: 191 LTKLNLRGTKITGEAFEPISKLP-LESLELAETDFGPEGMPAIANIEGLEKINL-WLTKI 248
Query: 245 GAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS--- 301
E SL A + L LN++ P+ L HL L + T VS
Sbjct: 249 DNE-----SLKAFEGKTSLTVLNVDNCPAITEEAIPV--IISLPHLKLLHLGKTSVSPDA 301
Query: 302 LHQLSSLSKLTNLSIRDAVLTNSGL 326
L QL L +L L + TN GL
Sbjct: 302 LPQLKPLQELETLFV-----TNLGL 321
>gi|423434920|ref|ZP_17411901.1| hypothetical protein IE9_01101 [Bacillus cereus BAG4X12-1]
gi|401125158|gb|EJQ32918.1| hypothetical protein IE9_01101 [Bacillus cereus BAG4X12-1]
Length = 760
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 137/286 (47%), Gaps = 38/286 (13%)
Query: 41 LADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRY---LRSLNV 97
+ D+ LR L+ +++ L E ++++ E + Y A +Y L+SL V
Sbjct: 191 ITDNKLRELVNKKVFNRKDLNTPITKEELLQVKDLFLNTNEILDY-SALKYMPNLKSLTV 249
Query: 98 ADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGI 157
A+ + + + +A + L L L R + +D + L+ + LE L LS +T +
Sbjct: 250 ANAK-IKDPSFFA--NLKQLSHLAL-RGNEFSD--VTPLVKMDNLESLDLSNNKIT--NV 301
Query: 158 ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 217
A L+ ++N+ L L G + D+ +L + +L+YL+L ++++N A L +++L
Sbjct: 302 APLTEMKNVKSLFLSGNQIEDVT--ALAKMEQLDYLNLANNKITN--VAPLSALKNVTYL 357
Query: 218 NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLS------LTALQNLNHLERLNLEQT 271
LA ++ +I +L L L TDLVL+ L+ ++ + LE L + +
Sbjct: 358 TLAGN---QIEDIKALYSLPL---------TDLVLTRNKVKDLSGIEQMKQLEELWIGKN 405
Query: 272 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 317
++ D T PLS +L L L N L D++ LSSL L L +
Sbjct: 406 EIKDVT--PLSKMTQLKQLHLPNNELKDIT--PLSSLVNLQKLDLE 447
>gi|32477277|ref|NP_870271.1| G protein-coupled receptor LGR4 [Rhodopirellula baltica SH 1]
gi|32447828|emb|CAD77346.1| probable G protein-coupled receptor LGR4 [Rhodopirellula baltica SH
1]
Length = 341
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 92/205 (44%), Gaps = 22/205 (10%)
Query: 130 DAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK 189
DA K + + L + +T +T DG ++L+ L L + L PVTD L S+ L K
Sbjct: 131 DAKAKSISGLPALVAVTFQDTSVTDDGASVLAELNELQDVSLMKSPVTDKTLTSISTLPK 190
Query: 190 LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSFIQQV 244
L L+L G++++ + P L L LA T G+ + NI LE +NL ++ ++
Sbjct: 191 LTKLNLRGTKITGEAFEPISKLP-LESLELAETDFGPEGMPAIANIEGLEKINL-WLTKI 248
Query: 245 GAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS--- 301
E SL A + L LN++ P+ L HL L + T VS
Sbjct: 249 DNE-----SLKAFEGKTSLTVLNVDNCPAITEEAIPV--IVSLPHLKLLHLGKTSVSPDA 301
Query: 302 LHQLSSLSKLTNLSIRDAVLTNSGL 326
L QL L +L L + TN GL
Sbjct: 302 LPQLKPLQELETLFV-----TNLGL 321
>gi|290978242|ref|XP_002671845.1| predicted protein [Naegleria gruberi]
gi|284085417|gb|EFC39101.1| predicted protein [Naegleria gruberi]
Length = 439
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 117/281 (41%), Gaps = 22/281 (7%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKEL---DLSRCVKVTDAGMKHLLSISTLEKLW 146
++L ++ ++ L+ CLK L D+S +++D +KH +++ L L
Sbjct: 72 KFLERVSNFTVKKNEEGNLFNCQIFECLKNLTRIDISD-NEISDERVKHFGNLTHLTNLV 130
Query: 147 LSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAA 206
++ + +G L L L+ L++G + + + L L LD+ + + +RGA
Sbjct: 131 INCNDIGVEGAKCLCQLNQLTRLNIGNNSLETEGAKYISELKNLTKLDIARNCIGDRGAQ 190
Query: 207 VLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLS--------LTALQ 258
+ +L+ LNL G+ E L FI ++ T L +S +
Sbjct: 191 FITEMKQLTSLNLNRNGI---------EYLGAKFISEMYQLTSLDISNNDIGSEGAKQIS 241
Query: 259 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 318
L+ L +L + + D +S K+L +L + + + L +LTNL+I
Sbjct: 242 KLDQLTKLYIYDNNIGDEGAMHISEMKQLTNLDISRNDIDSEGAKSICELYQLTNLNICS 301
Query: 319 AVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHP 359
+ +G +L +L++ + +E A +MH
Sbjct: 302 NYIGETGAKHISEMNNLTILEIGSNEIGSEGA-YHISRMHQ 341
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 114/268 (42%), Gaps = 27/268 (10%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVA-DCRRVTSSALWALTGMTCLKELDLSRCVKVTDAG 132
G NS++ E Y+ + L L++A +C + +T M L L+L+R + G
Sbjct: 156 GNNSLETEGAKYISELKNLTKLDIARNC--IGDRGAQFITEMKQLTSLNLNR-NGIEYLG 212
Query: 133 MKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 192
K + + L L +S + ++G +S L L+ L + + D + + +L
Sbjct: 213 AKFISEMYQLTSLDISNNDIGSEGAKQISKLDQLTKLYIYDNNIGDEGAMHISEMKQLTN 272
Query: 193 LDLWGSQVSNRGAAVLKMFPRLSFLNLA--WTGVTKLPNISSLECLNLSFI--QQVGAET 248
LD+ + + + GA + +L+ LN+ + G T +IS + L + I ++G+E
Sbjct: 273 LDISRNDIDSEGAKSICELYQLTNLNICSNYIGETGAKHISEMNNLTILEIGSNEIGSEG 332
Query: 249 DLVLS----LTAL---------------QNLNHLERLNLEQTQVSDATLFPLSTFKELIH 289
+S LT L + L +L++ + D +S K+L +
Sbjct: 333 AYHISRMHQLTRLMIFANDIGEKGAKHVSEMKQLTKLDIYDNNIGDEGTIHISEMKQLTY 392
Query: 290 LSLRNASLTDVSLHQLSSLSKLTNLSIR 317
L + ++ + L++LT L++
Sbjct: 393 LDVSANNIGHEGAEYIRKLNRLTFLNVH 420
>gi|406830084|ref|ZP_11089678.1| hypothetical protein SpalD1_00552 [Schlesneria paludicola DSM
18645]
Length = 249
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 176
L+ LDL V+D G+K L +S L L L+ TG+ G+ L L L L L G +
Sbjct: 113 LETLDLE-LSDVSDEGLKSLGRLSQLRGLGLNHTGIADIGLGYLRPLTGLQGLHLDGTKI 171
Query: 177 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK 226
TD ++ LQ ++ L+ L L + VS+ G VL L LNLA + VT+
Sbjct: 172 TDAGVKHLQSMSHLQILKLSNTLVSDAGVEVLFDLHELQILNLAESRVTR 221
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 6/116 (5%)
Query: 225 TKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTF 284
T+ P + +NL+ G TD V+ L L HLE L+LE + VSD L L
Sbjct: 81 TQFPLFDRITVVNLN----RGKNTDRVVPSLCL--LKHLETLDLELSDVSDEGLKSLGRL 134
Query: 285 KELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
+L L L + + D+ L L L+ L L + +T++G+ + L++L L
Sbjct: 135 SQLRGLGLNHTGIADIGLGYLRPLTGLQGLHLDGTKITDAGVKHLQSMSHLQILKL 190
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 25/165 (15%)
Query: 166 LSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 225
++V++L TD V+ SL +L LE LDL S VS+ G L +L L L TG+
Sbjct: 89 ITVVNLNRGKNTDRVVPSLCLLKHLETLDLELSDVSDEGLKSLGRLSQLRGLGLNHTGIA 148
Query: 226 KLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFK 285
+ L L+ L L+ L+L+ T+++DA + L +
Sbjct: 149 D-------------------------IGLGYLRPLTGLQGLHLDGTKITDAGVKHLQSMS 183
Query: 286 ELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 330
L L L N ++D + L L +L L++ ++ +T G S +
Sbjct: 184 HLQILKLSNTLVSDAGVEVLFDLHELQILNLAESRVTRRGFVSLR 228
>gi|404406789|ref|YP_006689504.1| internalin I [Listeria monocytogenes SLCC2376]
gi|404240938|emb|CBY62338.1| internalin I (LPXTG motif) [Listeria monocytogenes SLCC2376]
Length = 1775
Score = 54.3 bits (129), Expect = 1e-04, Method: Composition-based stats.
Identities = 69/305 (22%), Positives = 145/305 (47%), Gaps = 46/305 (15%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
+S E + L L++L ++D +T+ + A+T + LK L L C +T G
Sbjct: 372 DSCAIEDLGTLNNLPKLQTLVLSDNENLTN--ITAITDLPQLKTLTLDGC-GITSIGT-- 426
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
L ++ LEKL L E +T+ I+ ++ L LS LD+ +T + L+ L LE+L++
Sbjct: 427 LDNLPKLEKLDLKENKITS--ISEITDLPRLSYLDVSVNNLT--TIGDLKKLPLLEWLNV 482
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGV------TKLPNISSLECLNLSF--------- 240
+++++ + L FP L+++N++ + T+LP++ N S
Sbjct: 483 SSNRLTD--VSTLTNFPSLNYINISNNVIRTVGKMTELPSLKEFYAQNNSISDISMIHDM 540
Query: 241 --IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLF----PLSTFKELIHL---- 290
+++V A +L+ ++ NL L+ L++ +++ ++ L TF +L
Sbjct: 541 PNLRKVDASNNLITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLETFNAQANLITNI 600
Query: 291 ----SLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS------GLGSFKPPRSLKLLDL 340
+L + + ++S +++ SL+ + +L + ++ + LG+ L++LDL
Sbjct: 601 GTMDNLPDITYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDL 660
Query: 341 HGGWL 345
+L
Sbjct: 661 QNNYL 665
Score = 39.3 bits (90), Expect = 4.1, Method: Composition-based stats.
Identities = 59/255 (23%), Positives = 110/255 (43%), Gaps = 37/255 (14%)
Query: 94 SLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLT 153
SLN + + +T + LKE ++ ++D M H + L K+ S +T
Sbjct: 498 SLNYINISNNVIRTVGKMTELPSLKEF-YAQNNSISDISMIH--DMPNLRKVDASNNLIT 554
Query: 154 ADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPR 213
I +L L LD+ +T + + L LE + + ++N G + P
Sbjct: 555 --NIGTFDNLPKLQSLDVHSNRITSTSV--IHDLPSLETFNAQANLITNIGT--MDNLPD 608
Query: 214 LSFLNLAWTGVTKLPNISSLECL-------NLSFIQQVGAETDL----VL---------- 252
++++NL++ + L I L L N S+++ +G + +L
Sbjct: 609 ITYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDLQNNYLNYN 668
Query: 253 ----SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 308
+L++L +L +L LNL D + LST LI+L+L + + D+S LS+L
Sbjct: 669 GTEGNLSSLSDLTNLTELNLRNNVYID-DISGLSTLSRLIYLNLDSNKIEDIS--ALSNL 725
Query: 309 SKLTNLSIRDAVLTN 323
+ L L++ + + N
Sbjct: 726 TNLQELTLENNKIEN 740
>gi|290892518|ref|ZP_06555511.1| cell wall surface anchor family protein [Listeria monocytogenes FSL
J2-071]
gi|290557827|gb|EFD91348.1| cell wall surface anchor family protein [Listeria monocytogenes FSL
J2-071]
Length = 1775
Score = 54.3 bits (129), Expect = 1e-04, Method: Composition-based stats.
Identities = 69/305 (22%), Positives = 145/305 (47%), Gaps = 46/305 (15%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
+S E + L L++L ++D +T+ + A+T + LK L L C +T G
Sbjct: 372 DSCAIEDLGTLNNLPKLQTLVLSDNENLTN--ITAITDLPQLKTLTLDGC-GITSIGT-- 426
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
L ++ LEKL L E +T+ I+ ++ L LS LD+ +T + L+ L LE+L++
Sbjct: 427 LDNLPKLEKLDLKENKITS--ISEITDLPRLSYLDVSVNNLT--TIGDLKKLPLLEWLNV 482
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGV------TKLPNISSLECLNLSF--------- 240
+++++ + L FP L+++N++ + T+LP++ N S
Sbjct: 483 SSNRLTD--VSTLTNFPSLNYINISNNVIRTVGKMTELPSLKEFYAQNNSISDISMIHDM 540
Query: 241 --IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLF----PLSTFKELIHL---- 290
+++V A +L+ ++ NL L+ L++ +++ ++ L TF +L
Sbjct: 541 PNLRKVDASNNLITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLETFNAQANLITNI 600
Query: 291 ----SLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS------GLGSFKPPRSLKLLDL 340
+L + + ++S +++ SL+ + +L + ++ + LG+ L++LDL
Sbjct: 601 GTMDNLPDITYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDL 660
Query: 341 HGGWL 345
+L
Sbjct: 661 QNNYL 665
Score = 39.3 bits (90), Expect = 4.1, Method: Composition-based stats.
Identities = 59/255 (23%), Positives = 110/255 (43%), Gaps = 37/255 (14%)
Query: 94 SLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLT 153
SLN + + +T + LKE ++ ++D M H + L K+ S +T
Sbjct: 498 SLNYINISNNVIRTVGKMTELPSLKEF-YAQNNSISDISMIH--DMPNLRKVDASNNLIT 554
Query: 154 ADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPR 213
I +L L LD+ +T + + L LE + + ++N G + P
Sbjct: 555 --NIGTFDNLPKLQSLDVHSNRITSTSV--IHDLPSLETFNAQANLITNIGT--MDNLPD 608
Query: 214 LSFLNLAWTGVTKLPNISSLECL-------NLSFIQQVGAETDL----VL---------- 252
++++NL++ + L I L L N S+++ +G + +L
Sbjct: 609 ITYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDLQNNYLNYN 668
Query: 253 ----SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 308
+L++L +L +L LNL D + LST LI+L+L + + D+S LS+L
Sbjct: 669 GTEGNLSSLSDLTNLTELNLRNNVYID-DISGLSTLSRLIYLNLDSNKIEDIS--ALSNL 725
Query: 309 SKLTNLSIRDAVLTN 323
+ L L++ + + N
Sbjct: 726 TNLQELTLENNKIEN 740
>gi|147832652|emb|CAN74892.1| hypothetical protein VITISV_002002 [Vitis vinifera]
Length = 300
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 52/205 (25%)
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
++ LE + LS T +T G+ S+L +L L+L +TD L +L LT L +LDL+G
Sbjct: 115 GLANLESINLSFTAVTDSGLRKSSALSSLKSLNLDAHQITDAGLAALTSLTGLTHLDLFG 174
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWTGVTK--LPNISSLECLNLSFIQQVGAETDLVLSLT 255
+++++ G + L+ F L L + G+T + NI L CL +
Sbjct: 175 ARITDSGTSYLRNFKNLQSLEICGGGLTDAGVKNIKDLTCLTV----------------- 217
Query: 256 ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLS 315
LNL Q N +LTD SL +S L+ L +LS
Sbjct: 218 ----------LNLSQ-----------------------NCNLTDKSLELISGLTALVSLS 244
Query: 316 IRDAVLTNSGLGSFKPPRSLKLLDL 340
+ ++ +TN+GL K ++LK L L
Sbjct: 245 VSNSRITNAGLQHLKQLKNLKSLTL 269
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 2/128 (1%)
Query: 99 DCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIA 158
D ++T + L ALT +T L LDL ++TD+G +L + L+ L + GLT G+
Sbjct: 149 DAHQITDAGLAALTSLTGLTHLDLFG-ARITDSGTSYLRNFKNLQSLEICGGGLTDAGVK 207
Query: 159 LLSSLQNLSVLDLG-GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 217
+ L L+VL+L +TD L + LT L L + S+++N G LK L L
Sbjct: 208 NIKDLTCLTVLNLSQNCNLTDKSLELISGLTALVSLSVSNSRITNAGLQHLKQLKNLKSL 267
Query: 218 NLAWTGVT 225
L VT
Sbjct: 268 TLDSCKVT 275
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 53/95 (55%)
Query: 251 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 310
+L ++ L +LE +NL T V+D+ L S L L+L +TD L L+SL+
Sbjct: 107 ILLFVNMEGLANLESINLSFTAVTDSGLRKSSALSSLKSLNLDAHQITDAGLAALTSLTG 166
Query: 311 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 345
LT+L + A +T+SG + ++L+ L++ GG L
Sbjct: 167 LTHLDLFGARITDSGTSYLRNFKNLQSLEICGGGL 201
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 84 AYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLE 143
+YL F+ L+SL + +T + + + +TCL L+LS+ +TD ++ + ++ L
Sbjct: 183 SYLRNFKNLQSLEICG-GGLTDAGVKNIKDLTCLTVLNLSQNCNLTDKSLELISGLTALV 241
Query: 144 KLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
L +S + +T G+ L L+NL L L VT ++ LQ
Sbjct: 242 SLSVSNSRITNAGLQHLKQLKNLKSLTLDSCKVTVNDIKKLQ 283
>gi|356517903|ref|XP_003527625.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
kinase At2g16250-like [Glycine max]
Length = 898
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 85/191 (44%), Gaps = 12/191 (6%)
Query: 77 SVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHL 136
+VDA L F LRS N ++ S W + L LDL C + DA L
Sbjct: 88 AVDA-----LANFTLLRSFNASNFPLPGSIPDWFGLSLPSLTVLDLRSC-SIVDAIPSTL 141
Query: 137 LSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLW 196
+++ L L+LS+ L + L L LSVLDL +T + S L L LD+
Sbjct: 142 GNLTNLTSLYLSDNNLIGNVPGTLGQLLALSVLDLSRNSLTGSIPASFAFLGNLSSLDMS 201
Query: 197 GSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLP----NISSLECLNLSFIQQVGAETDLVL 252
+ +S + RL +LNL+ G++ LP ++SL L+LS VG L
Sbjct: 202 ANFLSGAIPTGIGTLSRLQYLNLSNNGLSSLPAELGGLASLVDLDLSENSFVGG--GLPP 259
Query: 253 SLTALQNLNHL 263
T L+NL +
Sbjct: 260 DFTRLRNLRRM 270
>gi|229144033|ref|ZP_04272449.1| Internalin [Bacillus cereus BDRD-ST24]
gi|228639430|gb|EEK95844.1| Internalin [Bacillus cereus BDRD-ST24]
Length = 755
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 115/239 (48%), Gaps = 37/239 (15%)
Query: 88 AFRY---LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEK 144
A +Y L+SL VA+ + + + +A LK+L+ A + L+ + LE
Sbjct: 232 ALKYMPNLKSLTVANAK-IKDPSFFA-----NLKQLNHLALRGNEFADVTPLVKMDNLES 285
Query: 145 LWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG 204
L LS +T +A L+ ++N+ L L G + D+ +L + +L+YL+L +++ N
Sbjct: 286 LDLSNNKIT--NVAPLTEMKNVKSLYLSGNQIEDVT--ALAKMEQLDYLNLANNKIKN-- 339
Query: 205 AAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLS------LTALQ 258
A L +++L LA ++ +I +L L L TDLVL+ L+ ++
Sbjct: 340 VAPLSALKNVTYLTLAGN---QIEDIKALYSLPL---------TDLVLTRNKVKDLSGIE 387
Query: 259 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 317
+ LE L + + ++ D T PLS +L L L N L D++ LSSL L L +
Sbjct: 388 QMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT--PLSSLVNLQKLDLE 442
>gi|300691655|ref|YP_003752650.1| type III effector protein [Ralstonia solanacearum PSI07]
gi|299078715|emb|CBJ51374.1| leucine-rich-repeat type III effector protein (GALA6) [Ralstonia
solanacearum PSI07]
Length = 608
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 95/228 (41%), Gaps = 27/228 (11%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
LG L L++ C + SS AL L L L ++ D G + L STL +L
Sbjct: 398 LGGSATLSVLDLCACD-IDSSGASALARNASLASLYLG-SNRIGDRGARALAKNSTLTRL 455
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
LS G+ G L+ +L LDLGG + D +L +L LDL G+++ + GA
Sbjct: 456 ALSGNGIHTTGAQALAGNDSLISLDLGGNEIDDDGAAALARHPRLISLDLRGNRIRSAGA 515
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLER 265
L L+ L+L+ ++GAE LS + + L
Sbjct: 516 QQLAKSATLAELDLSA--------------------NRIGAEGAEALSRSTV-----LTT 550
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 313
LN+ + DA L+ LI L R + + +V L + ++LT
Sbjct: 551 LNVSDNAIGDAGALALAKSTSLISLDARRSGIGEVGARALEANTRLTG 598
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 125/314 (39%), Gaps = 42/314 (13%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLS---------RCVK- 127
+ E L A L SL++ C + A AL +K LDLS R +
Sbjct: 199 IGVEGAQRLAASTSLASLSLIGCE-IGDRAAEALAASQSIKSLDLSANRIGRDGARALAG 257
Query: 128 ------------VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP 175
+ D G + L + TL L LS G+ G L+ L+ L+L G
Sbjct: 258 APLVSLNLYSNAIGDEGARALATSRTLTSLNLSSNGIDDAGAGALADNTLLTQLNLQGNR 317
Query: 176 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN-----LAWTGVTKLPNI 230
+ ++L T L LDL +++ +RGA L L+ L+ + G L
Sbjct: 318 IGRGGAQALANSTSLTDLDLGNNRLGDRGARALAGSKSLTSLSVRGNEIGDKGAKALARN 377
Query: 231 SSLECLNLSFIQQVGAETDLVLSLTALQNLNH---LERLNLEQTQVSDATLFPLSTFKEL 287
++L+ LNLS+ ++SL ++ L L L+L + + L+ L
Sbjct: 378 ATLKSLNLSYN---------LISLRGVRALGGSATLSVLDLCACDIDSSGASALARNASL 428
Query: 288 IHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLT 347
L L + + D L+ S LT L++ + +G + SL LDL GG +
Sbjct: 429 ASLYLGSNRIGDRGARALAKNSTLTRLALSGNGIHTTGAQALAGNDSLISLDL-GGNEID 487
Query: 348 EDAILQFCKMHPRI 361
+D + HPR+
Sbjct: 488 DDGAAALAR-HPRL 500
Score = 41.6 bits (96), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 101/249 (40%), Gaps = 18/249 (7%)
Query: 110 ALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVL 169
AL L L+LS + DAG L + L +L L + G L++ +L+ L
Sbjct: 277 ALATSRTLTSLNLS-SNGIDDAGAGALADNTLLTQLNLQGNRIGRGGAQALANSTSLTDL 335
Query: 170 DLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GV 224
DLG + D R+L L L + G+++ ++GA L L LNL++ GV
Sbjct: 336 DLGNNRLGDRGARALAGSKSLTSLSVRGNEIGDKGAKALARNATLKSLNLSYNLISLRGV 395
Query: 225 TKLPNISSLECLNLSF--IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 282
L ++L L+L I GA +AL L L L ++ D L+
Sbjct: 396 RALGGSATLSVLDLCACDIDSSGA--------SALARNASLASLYLGSNRIGDRGARALA 447
Query: 283 TFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF-KPPRSLKLLDLH 341
L L+L + L+ L +L + + + G + + PR L LDL
Sbjct: 448 KNSTLTRLALSGNGIHTTGAQALAGNDSLISLDLGGNEIDDDGAAALARHPR-LISLDLR 506
Query: 342 GGWLLTEDA 350
G + + A
Sbjct: 507 GNRIRSAGA 515
>gi|229043169|ref|ZP_04190893.1| Internalin [Bacillus cereus AH676]
gi|228726176|gb|EEL77409.1| Internalin [Bacillus cereus AH676]
Length = 766
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 115/239 (48%), Gaps = 37/239 (15%)
Query: 88 AFRY---LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEK 144
A +Y L+SL VA+ + + + +A LK+L+ A + L+ + LE
Sbjct: 243 ALKYMPNLKSLTVANAK-IKDPSFFA-----NLKQLNHLALRGNEFADVTPLVKMDNLES 296
Query: 145 LWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG 204
L LS +T +A L+ ++N+ L L G + D+ +L + +L+YL+L +++ N
Sbjct: 297 LDLSNNKIT--NVAPLTEMKNVKSLYLSGNQIEDVT--ALAKMEQLDYLNLANNKIKN-- 350
Query: 205 AAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLS------LTALQ 258
A L +++L LA ++ +I +L L L TDLVL+ L+ ++
Sbjct: 351 VAPLSALKNVTYLTLAGN---QIEDIKALYSLPL---------TDLVLTRNKVKDLSGIE 398
Query: 259 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 317
+ LE L + + ++ D T PLS +L L L N L D++ LSSL L L +
Sbjct: 399 QMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT--PLSSLVNLQKLDLE 453
>gi|167518830|ref|XP_001743755.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777717|gb|EDQ91333.1| predicted protein [Monosiga brevicollis MX1]
Length = 1048
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 112/256 (43%), Gaps = 26/256 (10%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
E DA A + + L + + VT+ + AL + L+ + LSRC KV D+ +
Sbjct: 772 EGITDAGLTALGASSKSLHEFELTENPVVTAQGVAALCHVPSLRRIVLSRCDKVKDS-IG 830
Query: 135 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 194
L LE L LS+ L D ++N++ L + D+VLR+L LT LD
Sbjct: 831 LALGSHALESLDLSDNLLIGD-----VGVRNVAQAAAAPLSLRDVVLRNLLRLTDTVSLD 885
Query: 195 LWGSQVSNRGAAVLKM--FPRLSFLNLAWT--------GVTKLPNISSLECLNLSFIQQV 244
L G + G V+ M P+L L+L +L + LE L+L+ Q V
Sbjct: 886 LSGCTTISDGGVVVAMQNMPKLRSLSLQGCFHVGDGALQAIQLHGVDQLEWLDLTDCQGV 945
Query: 245 GAETDLVLSLT--ALQNLNHLERLNLEQTQVSDATLFPLSTF-KELIHLSLRNASLTDVS 301
TDL + A L L L QT LF L+ + L+LR SLT+VS
Sbjct: 946 ---TDLGIEAVGQACPRLRGLALTGLSQT----LHLFGLAALTNAAVDLTLRCHSLTEVS 998
Query: 302 LHQLSSLSKLTNLSIR 317
S++++ L +R
Sbjct: 999 FSTASNITRDKILGVR 1014
>gi|168704644|ref|ZP_02736921.1| hypothetical protein GobsU_34225 [Gemmata obscuriglobus UQM 2246]
Length = 952
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 110/241 (45%), Gaps = 29/241 (12%)
Query: 111 LTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLD 170
L +T L+ELDLS C V+D + L +++ L L LS AD ++ L++L L LD
Sbjct: 651 LAPLTALEELDLSGCAGVSD--LSPLANLTALRFLDLSGCAGGAD-LSPLANLTALRFLD 707
Query: 171 LGGLP-VTDLVLRSLQVLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNL----AWTGV 224
L G V+DL L LT LE L+L G + VS+ + L L LNL W +
Sbjct: 708 LSGCAGVSDLA--PLANLTALEGLNLRGCAGVSD--LSPLANLTGLRHLNLSGCAGWADL 763
Query: 225 TKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQ-TQVSDATLFPLST 283
+ L N++ L LNL+ V L+ L L LE L+L VSD L PL+
Sbjct: 764 SPLANLTGLRHLNLNGCTGVS-------DLSPLAPLTALEELDLSGCAGVSD--LSPLAN 814
Query: 284 FKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD--AVLTNSGLGSFKPPRSLKLLDLH 341
L L L + + LS L+ T L D S L P +L+ LDL
Sbjct: 815 LTALEGLDLSGCA----GVSDLSPLAPHTALRFLDLSGCAGVSCLSPLAPHTALRFLDLS 870
Query: 342 G 342
G
Sbjct: 871 G 871
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 89/202 (44%), Gaps = 36/202 (17%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
LR LN+ C V S L L +T L+ELDLS C V+D + L +++ LE L LS
Sbjct: 772 LRHLNLNGCTGV--SDLSPLAPLTALEELDLSGCAGVSD--LSPLANLTALEGLDLSGCA 827
Query: 152 LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF 211
+D ++ L+ L LDL G L L T L +LDL G A V +
Sbjct: 828 GVSD-LSPLAPHTALRFLDLSGCAGVS-CLSPLAPHTALRFLDLSGC------AGVSDLS 879
Query: 212 PRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQ- 270
P L N+++LE L+LS V L+ L NL LE L+L
Sbjct: 880 P--------------LANLTALEDLDLSGCAGVS-------DLSPLANLTALEGLDLSGC 918
Query: 271 TQVSDATLFPLSTFKELIHLSL 292
T V D L PL+ L L L
Sbjct: 919 TGVLD--LSPLAPLTALQFLDL 938
>gi|148673927|gb|EDL05874.1| relaxin/insulin-like family peptide receptor 2 [Mus musculus]
Length = 748
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 105/240 (43%), Gaps = 18/240 (7%)
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
+T + L + L+ L+LS +T+ + L L+ L L P+T + +S L
Sbjct: 167 ITHISRRAFLGLHNLQILYLSHNCITSLRPGIFKDLHQLAWLILDDNPITRISQKSFMGL 226
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFI----QQ 243
L +L + G+++ + P+L++++LA G+ + N + L C +L+ + Q
Sbjct: 227 NSLFFLSMVGNRLEALPETLCAQMPQLNWVDLANNGIKYITNSTFLTCDSLTVLFLPRNQ 286
Query: 244 VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLH 303
+G + S +L +L L+L ++ + S L L+L + L V +
Sbjct: 287 IGFVPEKTFS-----SLKNLGELDLSSNMITKLPVHLFSDLHLLQKLNLSSNPLLYVHKN 341
Query: 304 QLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEV 363
Q SL +L +L + + N G F+P ++L + L ++C P + +
Sbjct: 342 QFGSLKQLQSLDLERIEIPNISTGMFQPMKNLSHIYL---------KTFRYCSYVPHVRI 392
>gi|389592478|ref|XP_003721680.1| hypothetical protein LMJF_03_0010 [Leishmania major strain
Friedlin]
gi|321438213|emb|CBZ11965.1| hypothetical protein LMJF_03_0010 [Leishmania major strain
Friedlin]
Length = 1003
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 101/187 (54%), Gaps = 15/187 (8%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP- 175
L+ L L C ++ D + L+ + L +++L+ TG++ + AL S NL VL +GG
Sbjct: 560 LQCLFLGGCTRIGDISL--LMHATQLREVYLTNTGIS-NIEALQPSAANLEVLAIGGCGR 616
Query: 176 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLEC 235
++D+ L V TKL + LWG+ +SN + P L L++ G +++ ISSL
Sbjct: 617 ISDIA--PLLVATKLRLVYLWGTNISNIHGIRFSV-PSLEVLDIG--GCSRVSEISSL-- 669
Query: 236 LNLSFIQQVGAETDLVLSLTALQ-NLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLR 293
LN S +++V + S+ AL+ + LE + L T +SD + PLST K+L + L
Sbjct: 670 LNASKLREVRLHNTAIQSIEALRPSAGCLEWVELVGCTHISD--ISPLSTAKKLREVYLT 727
Query: 294 NASLTDV 300
N +++ +
Sbjct: 728 NTAVSSI 734
>gi|423643526|ref|ZP_17619144.1| hypothetical protein IK9_03471 [Bacillus cereus VD166]
gi|401274106|gb|EJR80084.1| hypothetical protein IK9_03471 [Bacillus cereus VD166]
Length = 760
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 134/286 (46%), Gaps = 38/286 (13%)
Query: 41 LADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRY---LRSLNV 97
+ D+ LR L+ +++ L E ++++ E + Y A +Y L+SL V
Sbjct: 191 ITDNKLRELVNKKVFNRKDLNTPITKEELLQVKDLFLNTNEILDY-SALKYMPNLKSLTV 249
Query: 98 ADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGI 157
A+ + + + +A LK+L+ A + L+ + LE L LS +T +
Sbjct: 250 ANAK-IKDPSFFA-----NLKQLNHLALRGNEFADVTPLVKMDNLESLDLSNNKIT--NV 301
Query: 158 ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 217
A L+ ++N+ L L G + D+ +L + +L+YL+L ++++N A L +++L
Sbjct: 302 APLTEMKNVKSLYLSGNQIEDVT--ALAKMEQLDYLNLANNKITN--VAPLSALKNVTYL 357
Query: 218 NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLS------LTALQNLNHLERLNLEQT 271
LA ++ +I +L L L TDLVL+ L+ ++ + LE L + +
Sbjct: 358 TLAGN---QIEDIKALYSLPL---------TDLVLTRNKVKDLSGIEQMKQLEELWIGKN 405
Query: 272 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 317
++ D T PLS L L L N L D++ LSSL L L +
Sbjct: 406 EIKDVT--PLSKMTRLKQLHLPNNELKDIT--PLSSLVNLQKLDLE 447
>gi|229108884|ref|ZP_04238489.1| Internalin [Bacillus cereus Rock1-15]
gi|228674653|gb|EEL29892.1| Internalin [Bacillus cereus Rock1-15]
Length = 766
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 134/286 (46%), Gaps = 38/286 (13%)
Query: 41 LADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRY---LRSLNV 97
+ D+ LR L+ +++ L E ++++ E + Y A +Y L+SL V
Sbjct: 197 ITDNKLRELVNKKVFNRKDLNTPITKEELLQVKDLFLNTNEILDY-SALKYMPNLKSLTV 255
Query: 98 ADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGI 157
A+ + + + +A LK+L+ A + L+ + LE L LS +T +
Sbjct: 256 ANAK-IKDPSFFA-----NLKQLNHLALRGNEFADVTPLVKMDNLESLDLSNNKIT--NV 307
Query: 158 ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 217
A L+ ++N+ L L G + D+ +L + +L+YL+L +++ N A L +++L
Sbjct: 308 APLTEMKNVKSLYLSGNQIEDVT--ALAKMEQLDYLNLANNKIKN--VAPLSALKNVTYL 363
Query: 218 NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLS------LTALQNLNHLERLNLEQT 271
LA ++ +I +L L L TDLVL+ L+ ++ + LE L + +
Sbjct: 364 TLAGN---QIEDIKALYSLPL---------TDLVLTRNKVKDLSGIEQMKQLEELWIGKN 411
Query: 272 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 317
++ D T PLS +L L L N L D++ LSSL L L +
Sbjct: 412 EIKDVT--PLSKMTQLKQLHLPNNELKDIT--PLSSLVNLQKLDLE 453
>gi|296502010|ref|YP_003663710.1| internalin [Bacillus thuringiensis BMB171]
gi|423588187|ref|ZP_17564274.1| hypothetical protein IIE_03599 [Bacillus cereus VD045]
gi|296323062|gb|ADH05990.1| internalin [Bacillus thuringiensis BMB171]
gi|401226695|gb|EJR33229.1| hypothetical protein IIE_03599 [Bacillus cereus VD045]
Length = 760
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 115/239 (48%), Gaps = 37/239 (15%)
Query: 88 AFRY---LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEK 144
A +Y L+SL VA+ + + + +A LK+L+ A + L+ + LE
Sbjct: 237 ALKYMPNLKSLTVANAK-IKDPSFFA-----NLKQLNHLALRGNEFADVTPLVKMDNLES 290
Query: 145 LWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG 204
L LS +T +A L+ ++N+ L L G + D+ +L + +L+YL+L +++ N
Sbjct: 291 LDLSNNKIT--NVAPLTEMKNVKSLYLSGNQIEDVT--ALAKMEQLDYLNLANNKIKN-- 344
Query: 205 AAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLS------LTALQ 258
A L +++L LA ++ +I +L L L TDLVL+ L+ ++
Sbjct: 345 VAPLSALKNVTYLTLAGN---QIEDIKALYSLPL---------TDLVLTRNKVKDLSGIE 392
Query: 259 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 317
+ LE L + + ++ D T PLS +L L L N L D++ LSSL L L +
Sbjct: 393 QMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT--PLSSLVNLQKLDLE 447
>gi|206967881|ref|ZP_03228837.1| putative internalin [Bacillus cereus AH1134]
gi|206736801|gb|EDZ53948.1| putative internalin [Bacillus cereus AH1134]
Length = 760
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 137/286 (47%), Gaps = 38/286 (13%)
Query: 41 LADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRY---LRSLNV 97
+ D+ LR L+ +++ L E ++++ E + Y A +Y L+SL V
Sbjct: 191 ITDNKLRELVNKKVFNRKDLNTPITKEELLQVKDLFLNTNEILDY-SALKYMPNLKSLTV 249
Query: 98 ADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGI 157
A+ + + + +A + L L L R + +D + L+ + LE L LS +T +
Sbjct: 250 ANAK-IKDPSFFA--NLKQLSHLAL-RGNEFSD--VTPLVKMDNLESLDLSNNKIT--NV 301
Query: 158 ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 217
A L+ ++N+ L L G + D+ +L + +L+YL+L ++++N A L +++L
Sbjct: 302 APLTEMKNVKSLFLSGNQIEDVT--ALAKMEQLDYLNLANNKITN--VAPLSALKNVTYL 357
Query: 218 NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLS------LTALQNLNHLERLNLEQT 271
LA ++ +I +L L L TDLVL+ L+ ++ + LE L + +
Sbjct: 358 TLAGN---QIEDIKALYSLPL---------TDLVLTRNKVKDLSGIEQMKQLEELWIGKN 405
Query: 272 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 317
++ D T PLS +L L L N L D++ LSSL L L +
Sbjct: 406 EIKDVT--PLSKMTQLKQLHLPNNELKDIT--PLSSLVNLQKLDLE 447
>gi|440290256|gb|ELP83682.1| F-box/LRR-repeat protein, putative [Entamoeba invadens IP1]
Length = 653
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 69/133 (51%), Gaps = 2/133 (1%)
Query: 77 SVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHL 136
+VD YL ++ +L + C +VT LT + L+ L+++ C KV +G+K +
Sbjct: 461 AVDDNAFEYLQNLAFMENLVMEKCLKVTGFGASKLTKVPGLRVLNMNGCKKVDISGVKEM 520
Query: 137 LSISTLEKLWLSETGLTADGI-ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+S ++ L LS L D + LS ++ L +DL G PV D ++ +Q LE + L
Sbjct: 521 SELS-VQTLRLSGCELIGDEVWNFLSQMEELKRVDLSGTPVGDHGIQQIQKAKWLEVIYL 579
Query: 196 WGSQVSNRGAAVL 208
++V++ G + L
Sbjct: 580 SKTKVTDEGVSEL 592
>gi|302853080|ref|XP_002958057.1| hypothetical protein VOLCADRAFT_99233 [Volvox carteri f.
nagariensis]
gi|300256635|gb|EFJ40897.1| hypothetical protein VOLCADRAFT_99233 [Volvox carteri f.
nagariensis]
Length = 581
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 164/372 (44%), Gaps = 48/372 (12%)
Query: 7 SELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKH- 65
+E+ LCI A + +S+ SLE LPA L + L+ S L F+
Sbjct: 16 TEVQDLCIAAVAAAWDSLPA-----SSLEALPADLVQRVFDELLAAGRFSLSDLTRFREL 70
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRV---------------------- 103
+ + + L G V + + L LRSL++ C +V
Sbjct: 71 DLDTVVLVGRADVRNDRLRSLEKCSRLRSLDLTGCVQVSDVGVASLRRHGGLQRLRLSHC 130
Query: 104 ---TSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALL 160
T +AL + G+T L+EL+L C +T G+ L ++ L+ L L + G+ L
Sbjct: 131 VTLTDAALNHVRGLTGLQELELRECELITGEGLMQLSGLTQLKTLDLDQCRRIKGGLQHL 190
Query: 161 SSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL 219
+SL++L+ L LG P + D + L+ L +L L L +QV++ G + L L+ L+L
Sbjct: 191 TSLRHLATLRLGWCPLLGDSEVTWLRELGQLRELRLAYTQVTDVGVSHLAALTALTHLDL 250
Query: 220 AWTGVTKLPN--------ISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 271
G T+L + +++L+ L+L Q G + L++ L L L L T
Sbjct: 251 G--GCTRLTDAAAAPLQRLTALQVLSLYGCGQFG---NAGLAMLIAVPLLSLNSLTLSYT 305
Query: 272 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK- 330
V+ L LS+ L LSL + ++ D L L +L NL + + + + GL +
Sbjct: 306 AVTTPGLTALSSLSRLTLLSLDSCAVGDAVCRVLRRLPRLANLDLSETSVGDGGLDALTV 365
Query: 331 --PPRSLKLLDL 340
PP SL L L
Sbjct: 366 SGPPTSLTHLKL 377
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 13/165 (7%)
Query: 152 LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF 211
+T +G++ LS L L LDL +TD LR + L+ L LDL+ ++++ GA +L
Sbjct: 394 ITDEGLSKLSLLVGLQQLDLDSGTLTDACLRHVTGLSALTGLDLFSCRITDAGARLLGGS 453
Query: 212 PRLSFLN---------LAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNH 262
L L G L ++SL CLNLS ++G L+ +L+
Sbjct: 454 GHLGGNLRSLECCGGLLTDAGAVHLARLTSLTCLNLSQNARLGDAGAQSLA----ASLSD 509
Query: 263 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 307
L+ L+L T ++ A L ++ L +LS+ N +TD ++ +L S
Sbjct: 510 LQELSLNHTNITSACLRDVAALPWLRYLSVSNTRVTDAAVAKLRS 554
>gi|388455805|ref|ZP_10138100.1| hypothetical protein FdumT_04498 [Fluoribacter dumoffii Tex-KL]
Length = 398
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 105/242 (43%), Gaps = 26/242 (10%)
Query: 99 DCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIA 158
D + +S L L L L R ++ AG + L + TL+ L+L L +GI
Sbjct: 152 DSNPIGASGAKELAKNKTLIHLSL-RKSQIGAAGARALFANETLKSLYLGNNHLGNEGIK 210
Query: 159 LLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN 218
L + +++ +DL + + ++ L YL+L + + N GAA+L + +L+
Sbjct: 211 FLENNHSINFIDLENNNIDQDGIPTIVRKPNLFYLNLDKNPIHNAGAALLAQASMVRWLS 270
Query: 219 LAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATL 278
+A +C +VG E AL L+HL LN+++ + D +
Sbjct: 271 IA-------------DC-------RVGIE-----GAQALAALHHLAMLNIDKNFIGDEGI 305
Query: 279 FPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 338
L+ + L +L N S+ D L++ +L NLS+ + + G + +L L
Sbjct: 306 IALAKMRSLNNLYANNNSIGDEGAKNLANAIQLQNLSLNHNQIGDEGALALAETATLYAL 365
Query: 339 DL 340
D+
Sbjct: 366 DV 367
>gi|224007994|ref|XP_002292956.1| hypothetical protein THAPSDRAFT_16210 [Thalassiosira pseudonana
CCMP1335]
gi|220971082|gb|EED89417.1| hypothetical protein THAPSDRAFT_16210 [Thalassiosira pseudonana
CCMP1335]
Length = 301
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 77/154 (50%), Gaps = 9/154 (5%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
+ SL++AD ++ L + +K L L C VT AG++HL S++ LE L L
Sbjct: 124 ITSLDLAD-ADISDFGLSKIAQFKQMKRLSLFYC-NVTSAGLRHLSSMTKLEVLNLDSRE 181
Query: 152 LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF 211
+ +G+ L L L LD+ VTDL ++++ L+ L+L G V + G L
Sbjct: 182 IGDEGLKHLRDLP-LQSLDVFSGRVTDLGYGCIRLIKTLQSLELCGGGVGDIGCTHLATI 240
Query: 212 PRLSFLNLAWT------GVTKLPNISSLECLNLS 239
P L+ LNL+ G L +S+L+ LNLS
Sbjct: 241 PNLTSLNLSQNERITNRGAASLAALSNLKALNLS 274
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 136/273 (49%), Gaps = 23/273 (8%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSR-CVKVTDAGMKHLLSISTLEKLWLSET 150
L ++N+ CR +T +L AL G+ L +LDLS+ C++ + G I+ L+ L L +
Sbjct: 27 LVAVNLGGCRCLTDRSLEALGGLLGLTKLDLSQVCLRSSWQG-----KINNLKSLELCYS 81
Query: 151 GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL---QVLTKLEYLDLWGSQVSNRGAAV 207
G+ + +A SL L L+L + D + L V+ + LDL + +S+ G +
Sbjct: 82 GVQDNHLAHFRSLPMLEELNLDSCHLGDWSIAHLADNNVIPNITSLDLADADISDFGLSK 141
Query: 208 LKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNH 262
+ F ++ L+L + VT L +++ LE LNL +++G E L L++L
Sbjct: 142 IAQFKQMKRLSLFYCNVTSAGLRHLSSMTKLEVLNLDS-REIGDE-----GLKHLRDL-P 194
Query: 263 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI-RDAVL 321
L+ L++ +V+D + K L L L + D+ L+++ LT+L++ ++ +
Sbjct: 195 LQSLDVFSGRVTDLGYGCIRLIKTLQSLELCGGGVGDIGCTHLATIPNLTSLNLSQNERI 254
Query: 322 TNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQF 354
TN G S +LK L+L +T DA+ F
Sbjct: 255 TNRGAASLAALSNLKALNL-SNTAVTPDALRYF 286
>gi|168698231|ref|ZP_02730508.1| Protein kinase:GAF [Gemmata obscuriglobus UQM 2246]
Length = 683
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 71/145 (48%), Gaps = 20/145 (13%)
Query: 70 IELRGE------NSVDAEW-----------MAYLGAFRYLRSLNVADCRRVTSSALWALT 112
I LRG+ N +DA+W +A G Y SLN L AL
Sbjct: 517 IPLRGQWFSRATNGLDAQWTPGGAKLPGEVVAKPGEV-YRLSLNPDTTGDAELVKLKALA 575
Query: 113 GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIA-LLSSLQNLSVLDL 171
G+ L+ +DLS CV+VTDAG+ HL S+ L+ + L++T +T G+ LL+ +L + L
Sbjct: 576 GLPGLEAVDLSGCVRVTDAGLMHLASLRGLKAVGLADTQVTDSGVTLLLTRFPDLEAVGL 635
Query: 172 GGLP-VTDLVLRSLQVLTKLEYLDL 195
V+ V+ L + KL+ L L
Sbjct: 636 ANTAYVSPTVIPYLARMRKLKRLAL 660
>gi|168704685|ref|ZP_02736962.1| hypothetical protein GobsU_34430 [Gemmata obscuriglobus UQM 2246]
Length = 227
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 77/151 (50%), Gaps = 9/151 (5%)
Query: 97 VADCRRVTSSALWALTG---MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLT 153
VA T +AL AL + ++ D +RC T+ G+ L + L +L L ++ LT
Sbjct: 55 VAKFEAGTDAALAALKKRPQVGAVEVFDATRC---TEKGLVVLKDLPELRRLALGKSDLT 111
Query: 154 ADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFP 212
+ ++ + L L L G ++D L L+ LT+LE LDL +QV+++G A +K
Sbjct: 112 LARVNAIAKCKELRDLRLPGAGLSDPELAPLKALTRLEQLDLSENAQVTDKGMATVKTLE 171
Query: 213 RLSFLNLAWTGVTK--LPNISSLECLNLSFI 241
RL L LA TG+T L + LE L ++
Sbjct: 172 RLRGLYLAKTGLTDKGLAELKGLEGLRSLYV 202
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 43/70 (61%)
Query: 108 LWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLS 167
L L +T L++LDLS +VTD GM + ++ L L+L++TGLT G+A L L+ L
Sbjct: 139 LAPLKALTRLEQLDLSENAQVTDKGMATVKTLERLRGLYLAKTGLTDKGLAELKGLEGLR 198
Query: 168 VLDLGGLPVT 177
L +GG VT
Sbjct: 199 SLYVGGTKVT 208
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 72/172 (41%), Gaps = 32/172 (18%)
Query: 218 NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDAT 277
+ A + K P + ++E + + + G L L++L L RL L ++ ++ A
Sbjct: 63 DAALAALKKRPQVGAVEVFDATRCTEKG--------LVVLKDLPELRRLALGKSDLTLAR 114
Query: 278 LFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI-RDAVLTNSGLGSFKPPRSLK 336
+ ++ KEL L L A L+D L L +L++L L + +A +T+ G+ + K L+
Sbjct: 115 VNAIAKCKELRDLRLPGAGLSDPELAPLKALTRLEQLDLSENAQVTDKGMATVKTLERLR 174
Query: 337 LLDLH-----------------------GGWLLTEDAILQFCKMHPRIEVWH 365
L L GG +T DA QF P + V
Sbjct: 175 GLYLAKTGLTDKGLAELKGLEGLRSLYVGGTKVTADAAEQFADDMPNLRVVR 226
>gi|390362171|ref|XP_003730087.1| PREDICTED: F-box/LRR-repeat protein 14-like [Strongylocentrotus
purpuratus]
Length = 478
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 31/173 (17%)
Query: 79 DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL- 137
D M+ LRSLN++ C +T + + +L+ M L+EL+L C ++D G+ HL
Sbjct: 301 DTALMSIAKGLHKLRSLNLSFCCGITDTGMISLSRMQSLRELNLRSCDNISDIGLAHLAE 360
Query: 138 --------------------------SISTLEKLWLSETGLTADGIA-LLSSLQNLSVLD 170
+ L+ + LS +T +G+ L+ SL N++ L+
Sbjct: 361 YGGHFATLDASFCDKIGDAALSHISQGMPNLKNVSLSSCHITDEGVGRLVRSLHNMTTLN 420
Query: 171 LG-GLPVTDLVLRSL-QVLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLA 220
+G + VTD L + + L +L+ +DL+G + ++ G + P L+ LNL
Sbjct: 421 IGQCVRVTDKGLALIAEHLKELKCIDLYGCTMITTVGLERIMQLPCLTVLNLG 473
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 132/313 (42%), Gaps = 60/313 (19%)
Query: 110 ALTGMTCLKELDLSRCVKVTDAGMKHLLS--ISTLEKLWLSETGLTADGI--ALLSSLQN 165
+ GM ++ L+LS C +TD G+ H S I TL L LS D + L+
Sbjct: 169 VMQGMPNIQSLNLSGCYNLTDVGLSHAFSKEIPTLTVLNLSLCKQITDTSLWRIEQYLKQ 228
Query: 166 LSVLDLGGL----------------PVTDLVLRSLQVLTKLEYLDLWGSQV-SNRGA--- 205
L VLDL G + L LRS + ++ + L G V + RG
Sbjct: 229 LEVLDLAGCSNITNTGLLVIARGLHKLKGLNLRSCRHISDVGIGYLAGVSVEAARGTRDL 288
Query: 206 -----------------AVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSFIQ 242
++ K +L LNL++ TG+ L + SL LNL
Sbjct: 289 ELLVLQDCQKLSDTALMSIAKGLHKLRSLNLSFCCGITDTGMISLSRMQSLRELNLRSCD 348
Query: 243 QVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPLST-FKELIHLSLRNASLTDV 300
+ +D+ L+ A + H L+ ++ DA L +S L ++SL + +TD
Sbjct: 349 NI---SDIGLAHLA-EYGGHFATLDASFCDKIGDAALSHISQGMPNLKNVSLSSCHITDE 404
Query: 301 SLHQL-SSLSKLTNLSIRDAV-LTNSGLGSFKPP-RSLKLLDLHGGWLLTE---DAILQF 354
+ +L SL +T L+I V +T+ GL + LK +DL+G ++T + I+Q
Sbjct: 405 GVGRLVRSLHNMTTLNIGQCVRVTDKGLALIAEHLKELKCIDLYGCTMITTVGLERIMQL 464
Query: 355 -CKMHPRIEVWHE 366
C + +WH+
Sbjct: 465 PCLTVLNLGLWHK 477
>gi|383852952|ref|XP_003701989.1| PREDICTED: F-box/LRR-repeat protein 14-like [Megachile rotundata]
Length = 479
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 97/194 (50%), Gaps = 24/194 (12%)
Query: 87 GAFRYLRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
G L L++ DC+R++ AL ++ G+T LK ++LS CV +TD+G+KHL +S+L +L
Sbjct: 284 GGNFALEHLSLQDCQRLSDEALRHISIGLTTLKSINLSFCVCITDSGVKHLAKMSSLREL 343
Query: 146 WL------SETGLT--ADGIALLSSLQNLSVLDLGGLPVTDLVLRSL-QVLTKLEYLDLW 196
L S+ G+ A+G + +SSL ++S D + D L + Q L L+ L L
Sbjct: 344 NLRSCDNISDIGMAYLAEGGSRISSL-DVSFCD----KIGDQALVHISQGLFNLKSLSLS 398
Query: 197 GSQVSNRG-AAVLKMFPRLSFLNLAWTG-------VTKLPNISSLECLNLSFIQQVGAET 248
Q+S+ G + K L LN+ T ++ L+C++L ++
Sbjct: 399 ACQISDEGICKIAKTLHDLETLNIGQCSRLTDKGLYTIAESMKHLKCIDLYGCTRISTNG 458
Query: 249 -DLVLSLTALQNLN 261
+ ++ L L LN
Sbjct: 459 LERIMKLPQLSTLN 472
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 144/327 (44%), Gaps = 66/327 (20%)
Query: 27 WR--RQRRSLERLPAHLADSLLRHLIRRRLIFP---SLLEVFKH--NAEAIELRG-ENSV 78
WR R L + L SL+R ++R + L +V + N EA+ L G N
Sbjct: 130 WRGVEARLHLRKQAPALFASLVRRGVKRVQVLSLRRGLGDVLRGVPNLEALNLSGCYNIT 189
Query: 79 DAEWM-AYLGAFRYLRSLNVADCRRVTSSALWAL--------------------TGMTC- 116
DA + A+ + L LN++ C++V+ +L + TG+ C
Sbjct: 190 DAGLINAFCQEYSTLTELNLSLCKQVSDISLGRIVQYLKNLEHLELGGCCNITNTGLLCI 249
Query: 117 ------LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLD 170
LK LDL C +V+D G+ HL G+ + +L++LS+ D
Sbjct: 250 AWNLKKLKRLDLRSCWQVSDLGIAHL-------------AGVNREAAGGNFALEHLSLQD 296
Query: 171 LGGLPVTDLVLRSLQV-LTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNL------AWT 222
L +D LR + + LT L+ ++L + +++ G L L LNL +
Sbjct: 297 CQRL--SDEALRHISIGLTTLKSINLSFCVCITDSGVKHLAKMSSLRELNLRSCDNISDI 354
Query: 223 GVTKLPNISS-LECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPL 281
G+ L S + L++SF ++G + + +S Q L +L+ L+L Q+SD + +
Sbjct: 355 GMAYLAEGGSRISSLDVSFCDKIGDQALVHIS----QGLFNLKSLSLSACQISDEGICKI 410
Query: 282 S-TFKELIHLSLRNAS-LTDVSLHQLS 306
+ T +L L++ S LTD L+ ++
Sbjct: 411 AKTLHDLETLNIGQCSRLTDKGLYTIA 437
>gi|229068980|ref|ZP_04202273.1| Internalin [Bacillus cereus F65185]
gi|229078614|ref|ZP_04211171.1| Internalin [Bacillus cereus Rock4-2]
gi|228704684|gb|EEL57113.1| Internalin [Bacillus cereus Rock4-2]
gi|228714092|gb|EEL65974.1| Internalin [Bacillus cereus F65185]
Length = 766
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 137/286 (47%), Gaps = 38/286 (13%)
Query: 41 LADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRY---LRSLNV 97
+ D+ LR L+ +++ L E ++++ E + Y A +Y L+SL V
Sbjct: 197 ITDNKLRELVNKKVFNRKDLNTPITKEELLQVKDLFLNTNEILDY-SALKYMPNLKSLTV 255
Query: 98 ADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGI 157
A+ + + + +A + L L L R + +D + L+ + LE L LS +T +
Sbjct: 256 ANAK-IKDPSFFA--NLKQLSHLAL-RGNEFSD--VTPLVKMDNLESLDLSNNKIT--NV 307
Query: 158 ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 217
A L+ ++N+ L L G + D+ +L + +L+YL+L ++++N A L +++L
Sbjct: 308 APLTEMKNVKSLFLSGNQIEDVT--ALAKMEQLDYLNLANNKITN--VAPLSALKNVTYL 363
Query: 218 NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLS------LTALQNLNHLERLNLEQT 271
LA ++ +I +L L L TDLVL+ L+ ++ + LE L + +
Sbjct: 364 TLAGN---QIEDIKALYSLPL---------TDLVLTRNKVKDLSGIEQMKQLEELWIGKN 411
Query: 272 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 317
++ D T PLS +L L L N L D++ LSSL L L +
Sbjct: 412 EIKDVT--PLSKMTQLKQLHLPNNELKDIT--PLSSLVNLQKLDLE 453
>gi|48096980|ref|XP_393659.1| PREDICTED: f-box/LRR-repeat protein 14 [Apis mellifera]
gi|380017700|ref|XP_003692785.1| PREDICTED: F-box/LRR-repeat protein 14-like [Apis florea]
Length = 481
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 97/194 (50%), Gaps = 24/194 (12%)
Query: 87 GAFRYLRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
G L L++ DC+R++ AL ++ G+T LK ++LS CV +TD+G+KHL +S+L +L
Sbjct: 286 GGNLALEHLSLQDCQRLSDEALRHVSIGLTTLKSINLSFCVCITDSGLKHLAKMSSLREL 345
Query: 146 WL------SETGLT--ADGIALLSSLQNLSVLDLGGLPVTDLVLRSL-QVLTKLEYLDLW 196
L S+ G+ A+G + +SSL ++S D + D L + Q L L+ L L
Sbjct: 346 NLRSCDNVSDIGMAYLAEGGSRISSL-DVSFCD----KIGDQALVHISQGLFNLKLLSLS 400
Query: 197 GSQVSNRG-AAVLKMFPRLSFLNLAWTG-------VTKLPNISSLECLNLSFIQQVGAET 248
Q+S+ G + K L LN+ T ++ L+C++L ++
Sbjct: 401 ACQISDEGICKIAKTLHDLETLNIGQCSRLTDKGLYTIAESMKHLKCIDLYGCTRISTNG 460
Query: 249 -DLVLSLTALQNLN 261
+ ++ L L LN
Sbjct: 461 LERIMKLPQLSTLN 474
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 142/335 (42%), Gaps = 82/335 (24%)
Query: 27 WR--RQRRSLERLPAHLADSLLRHLIRRRLIFP---SLLEVFKH--NAEAIELRG-ENSV 78
WR R L + L SL+R ++R + L +V K N EA+ L G N
Sbjct: 132 WRGVEARLHLRKQAPALFASLVRRGVKRVQVLSLRRGLGDVLKGVPNLEALNLSGCYNIT 191
Query: 79 DAEWM-AYLGAFRYLRSLNVADCRRVTSSALWALT--------------------GMTC- 116
DA + A+ + L LN++ C++V+ +L + G+ C
Sbjct: 192 DAGLINAFCQEYTTLTELNLSLCKQVSDISLGRIVQYLKNLEHLELGGCCNITNGGLLCI 251
Query: 117 ------LKELDLSRCVKVTDAGMKHLLSIS--------TLEKLWLSETGLTAD------- 155
LK LDL C +V+D G+ HL ++ LE L L + +D
Sbjct: 252 AWNLKKLKRLDLRSCWQVSDLGIAHLAGVNREAAGGNLALEHLSLQDCQRLSDEALRHVS 311
Query: 156 -GIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS-QVSNRGAAVLKMFPR 213
G+ L S+ NLS + +TD L+ L ++ L L+L VS+ G A
Sbjct: 312 IGLTTLKSI-NLSFC----VCITDSGLKHLAKMSSLRELNLRSCDNVSDIGMAY------ 360
Query: 214 LSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQV 273
LA G S + L++SF ++G + + +S Q L +L+ L+L Q+
Sbjct: 361 -----LAEGG-------SRISSLDVSFCDKIGDQALVHIS----QGLFNLKLLSLSACQI 404
Query: 274 SDATLFPLS-TFKELIHLSLRNAS-LTDVSLHQLS 306
SD + ++ T +L L++ S LTD L+ ++
Sbjct: 405 SDEGICKIAKTLHDLETLNIGQCSRLTDKGLYTIA 439
>gi|350417674|ref|XP_003491538.1| PREDICTED: F-box/LRR-repeat protein 14-like [Bombus impatiens]
Length = 485
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 97/194 (50%), Gaps = 24/194 (12%)
Query: 87 GAFRYLRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
G L L++ DC+R++ AL ++ G+T LK ++LS CV +TD+G+KHL +S+L +L
Sbjct: 290 GGNLALEHLSLQDCQRLSDEALRHVSIGLTTLKSINLSFCVCITDSGLKHLAKMSSLREL 349
Query: 146 WL------SETGLT--ADGIALLSSLQNLSVLDLGGLPVTDLVLRSL-QVLTKLEYLDLW 196
L S+ G+ A+G + +SSL ++S D + D L + Q L L+ L L
Sbjct: 350 NLRSCDNISDIGMAYLAEGGSRISSL-DVSFCD----KIGDQALVHISQGLFNLKLLSLS 404
Query: 197 GSQVSNRG-AAVLKMFPRLSFLNLAWTG-------VTKLPNISSLECLNLSFIQQVGAET 248
Q+S+ G + K L LN+ T ++ L+C++L ++
Sbjct: 405 ACQISDEGICKIAKTLHDLETLNIGQCSRLTDKGLYTIAESMKHLKCIDLYGCTRISTNG 464
Query: 249 -DLVLSLTALQNLN 261
+ ++ L L LN
Sbjct: 465 LERIMKLPQLSTLN 478
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 106/238 (44%), Gaps = 47/238 (19%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSIS------- 140
+ L L + C +T+ L + + LK LDL C +V+D G+ HL ++
Sbjct: 233 LKNLEHLELGGCCNITNGGLLCIAWNLKKLKRLDLRSCWQVSDLGIAHLAGVNRESAGGN 292
Query: 141 -TLEKLWLSETGLTAD--------GIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLE 191
LE L L + +D G+ L S+ NLS + +TD L+ L ++ L
Sbjct: 293 LALEHLSLQDCQRLSDEALRHVSIGLTTLKSI-NLSFC----VCITDSGLKHLAKMSSLR 347
Query: 192 YLDLWGS-QVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDL 250
L+L +S+ G A LA G S + L++SF ++G + +
Sbjct: 348 ELNLRSCDNISDIGMAY-----------LAEGG-------SRISSLDVSFCDKIGDQALV 389
Query: 251 VLSLTALQNLNHLERLNLEQTQVSDATLFPLS-TFKELIHLSLRNAS-LTDVSLHQLS 306
+S Q L +L+ L+L Q+SD + ++ T +L L++ S LTD L+ ++
Sbjct: 390 HIS----QGLFNLKLLSLSACQISDEGICKIAKTLHDLETLNIGQCSRLTDKGLYTIA 443
>gi|335427390|ref|ZP_08554321.1| Rab family protein [Haloplasma contractile SSD-17B]
gi|334895063|gb|EGM33243.1| Rab family protein [Haloplasma contractile SSD-17B]
Length = 1451
Score = 53.9 bits (128), Expect = 2e-04, Method: Composition-based stats.
Identities = 73/274 (26%), Positives = 122/274 (44%), Gaps = 41/274 (14%)
Query: 68 EAIELRGENSVDAEWMAYLGAFR--YLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
E I L N D + + + +L + N+ D L L ++ L L LS
Sbjct: 1086 EDINLNNNNFSDLSSLQNIKTLKNLWLENNNITD--------LSVLANLSNLDSLYLSNN 1137
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+V+D + L++++ L+ ++LS +T S++ NL+ L L G +TD+ L
Sbjct: 1138 -QVSD--LTPLINLANLQNVYLSNNQVTTLP-ENFSNMLNLNGLHLSGNQITDVT--PLS 1191
Query: 186 VLTKLEYLDLWGSQVSN-RGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQ-- 242
L LDL +Q+++ +L L+ + + + +T L N++ L L L+ Q
Sbjct: 1192 TAPALIELDLSNNQITDLTNYDLLTYLFSLNLNDNSISDLTPLANLTKLSSLRLNNNQIS 1251
Query: 243 ------------QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 290
+ AE + + LT L NLN + L L Q+SD T LS+ +L +L
Sbjct: 1252 DLTPLGGLTNLTHLYAENNAISDLTPLTNLNKIWYLVLNGNQISDLT--ALSSLTDLSYL 1309
Query: 291 SLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS 324
+ N +TD LS L NL + D L N+
Sbjct: 1310 RMNNNQITD--------LSPLQNLRLSDLQLNNN 1335
Score = 44.3 bits (103), Expect = 0.11, Method: Composition-based stats.
Identities = 52/196 (26%), Positives = 90/196 (45%), Gaps = 22/196 (11%)
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
V DAG+K + L+ ++++E +T + L+SL G V LQ
Sbjct: 1013 VEDAGLKQ----AILDDMYITEGPVTTEMAESLTSL-------YAGFYYIRSV-EGLQYF 1060
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAE 247
T L +DL + +S+ L+ P L +NL ++SSL+ N+ ++ + E
Sbjct: 1061 TNLTKIDLLYNDISD--ITPLENLPLLEDINL---NNNNFSDLSSLQ--NIKTLKNLWLE 1113
Query: 248 TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 307
+ + L+ L NL++L+ L L QVSD T PL L ++ L N +T + S+
Sbjct: 1114 NNNITDLSVLANLSNLDSLYLSNNQVSDLT--PLINLANLQNVYLSNNQVTTLP-ENFSN 1170
Query: 308 LSKLTNLSIRDAVLTN 323
+ L L + +T+
Sbjct: 1171 MLNLNGLHLSGNQITD 1186
Score = 42.4 bits (98), Expect = 0.47, Method: Composition-based stats.
Identities = 62/233 (26%), Positives = 115/233 (49%), Gaps = 25/233 (10%)
Query: 91 YLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET 150
YL SLN+ D + S L L +T L L L+ +++D + L ++ L L+ +E
Sbjct: 1217 YLFSLNLNDN---SISDLTPLANLTKLSSLRLNNN-QISD--LTPLGGLTNLTHLY-AEN 1269
Query: 151 GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKM 210
+D + L++L + L L G ++DL +L LT L YL + +Q+++ + L+
Sbjct: 1270 NAISD-LTPLTNLNKIWYLVLNGNQISDLT--ALSSLTDLSYLRMNNNQITD--LSPLQN 1324
Query: 211 FPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 270
RLS L L ++ L ++ N + I ++ + + ++ + N L L L+
Sbjct: 1325 L-RLSDLQLNNNLISDLSYLA-----NSTSISKLLLNNNQISDISVISNFTGLRTLELDD 1378
Query: 271 TQVSDATLFPLSTFKELIHLSLRNASLTDVS-LHQLSSLSKL----TNLSIRD 318
+SD + T EL++ LRN ++DV+ L L++L +L N+ ++D
Sbjct: 1379 NMISDLSALSSQTNLELLY--LRNNLISDVTPLTSLTTLWRLYLDGNNIDLQD 1429
Score = 39.3 bits (90), Expect = 3.5, Method: Composition-based stats.
Identities = 36/141 (25%), Positives = 72/141 (51%), Gaps = 17/141 (12%)
Query: 203 RGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNH 262
R L+ F L+ ++L + ++ +I+ LE NL ++ + + L++LQN+
Sbjct: 1052 RSVEGLQYFTNLTKIDLLYNDIS---DITPLE--NLPLLEDINLNNNNFSDLSSLQNIKT 1106
Query: 263 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLS-IRDAVL 321
L+ L LE ++D ++ L+ L L L N +Q+S L+ L NL+ +++ L
Sbjct: 1107 LKNLWLENNNITDLSV--LANLSNLDSLYLSN--------NQVSDLTPLINLANLQNVYL 1156
Query: 322 TNSGLGSFKPPRSLKLLDLHG 342
+N+ + + P +L+L+G
Sbjct: 1157 SNNQVTTL-PENFSNMLNLNG 1176
>gi|290995691|ref|XP_002680416.1| predicted protein [Naegleria gruberi]
gi|284094037|gb|EFC47672.1| predicted protein [Naegleria gruberi]
Length = 200
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 75/153 (49%), Gaps = 8/153 (5%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGM---TCLKELDLSRCVKVTDAG 132
N +D+E + + L+ L++ C ++ + ++ M TCLK ++ D
Sbjct: 12 NQIDSEGARLISQIQQLKYLDIG-CNQIGTKGAEFMSEMKQLTCLK----VNNNQLKDEA 66
Query: 133 MKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 192
M+ + + L L ++ + ++G+ + +L+ L+ L++ + +L S+ L+ L Y
Sbjct: 67 MQSIGQLENLTHLNVNGNEIHSNGVEHIVNLKQLTRLEMNCNEIRNLNPDSISQLSNLTY 126
Query: 193 LDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 225
LD++ + N + +L+FLN+ + GVT
Sbjct: 127 LDIYNNNTGNSAVQAITSLKQLTFLNIGYNGVT 159
Score = 41.2 bits (95), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 88/193 (45%), Gaps = 25/193 (12%)
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL--- 219
++NL+ LD+ + R + + +L+YLD+ +Q+ +GA + +L+ L +
Sbjct: 1 MKNLTWLDIHSNQIDSEGARLISQIQQLKYLDIGCNQIGTKGAEFMSEMKQLTCLKVNNN 60
Query: 220 -----AWTGVTKLPNISSLECLNLSFIQQVGAE--------TDLVLSLTALQNLN----- 261
A + +L N++ L +N + I G E T L ++ ++NLN
Sbjct: 61 QLKDEAMQSIGQLENLTHLN-VNGNEIHSNGVEHIVNLKQLTRLEMNCNEIRNLNPDSIS 119
Query: 262 ---HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 318
+L L++ ++ + +++ K+L L++ +T LS + +L NL ++
Sbjct: 120 QLSNLTYLDIYNNNTGNSAVQAITSLKQLTFLNIGYNGVTWFGAFSLSEMKQLKNLKMKS 179
Query: 319 AVLTNSGLGSFKP 331
+ N GL + K
Sbjct: 180 NSIGNDGLEALKS 192
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 73/159 (45%), Gaps = 11/159 (6%)
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSFI 241
+ L +LD+ +Q+ + GA ++ +L +L++ G + + L CL ++
Sbjct: 1 MKNLTWLDIHSNQIDSEGARLISQIQQLKYLDIGCNQIGTKGAEFMSEMKQLTCLKVNNN 60
Query: 242 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 301
Q + + + S+ L+NL HL N+ ++ + + K+L L + + +++
Sbjct: 61 Q---LKDEAMQSIGQLENLTHL---NVNGNEIHSNGVEHIVNLKQLTRLEMNCNEIRNLN 114
Query: 302 LHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
+S LS LT L I + NS + + + L L++
Sbjct: 115 PDSISQLSNLTYLDIYNNNTGNSAVQAITSLKQLTFLNI 153
>gi|290974240|ref|XP_002669854.1| predicted protein [Naegleria gruberi]
gi|284083406|gb|EFC37110.1| predicted protein [Naegleria gruberi]
Length = 357
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 82/174 (47%), Gaps = 14/174 (8%)
Query: 77 SVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHL 136
SV +E Y+ +++LN++D + S L+ LT + L L L C +++ G++HL
Sbjct: 159 SVTSESCQYIQKCELIKNLNLSDNKIGNESCLY-LTKLKNLTILRLEDC-NISEKGVEHL 216
Query: 137 LSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLW 196
I TL L +S+ + DG + L+NL+ L V ++++ L KL L+L
Sbjct: 217 SQIETLTILNVSKNRIEDDGFVNICKLKNLTSLKAASCSVES--IKNITNLIKLTSLNLG 274
Query: 197 GSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECL-----NLSF 240
+ + N G ++ L L L V L +SS+E L NLSF
Sbjct: 275 QNSIDNEGVKIIGELTNLKTLTLENNVFQPEAVQYLTKLSSMEVLDLRDNNLSF 328
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 111/246 (45%), Gaps = 30/246 (12%)
Query: 114 MTCLKELDLSRCVKVTDAGMKHL--LSISTLEKLWLSETGL-TADGIALLSSLQNLSVLD 170
+ C+ E +S C + +K+L +L++L L GL ++ +A SL++LS++
Sbjct: 79 LKCVNEF-VSDCPYSFEEFVKYLDECQFDSLKRLNL--IGLEVSNVVARFGSLESLSLIG 135
Query: 171 LGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV------ 224
+G + S+ L++L YL+L S V++ ++ + LNL+ +
Sbjct: 136 MGAE-----IGNSIGNLSRLTYLNLNASSVTSESCQYIQKCELIKNLNLSDNKIGNESCL 190
Query: 225 --TKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 282
TKL N++ L L I + G E L + L LN+ + ++ D +
Sbjct: 191 YLTKLKNLTILR-LEDCNISEKGVE--------HLSQIETLTILNVSKNRIEDDGFVNIC 241
Query: 283 TFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 342
K L SL+ AS + S+ +++L KLT+L++ + N G+ +LK L L
Sbjct: 242 KLKNLT--SLKAASCSVESIKNITNLIKLTSLNLGQNSIDNEGVKIIGELTNLKTLTLEN 299
Query: 343 GWLLTE 348
E
Sbjct: 300 NVFQPE 305
>gi|340728038|ref|XP_003402339.1| PREDICTED: f-box/LRR-repeat protein 14-like [Bombus terrestris]
Length = 485
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 97/194 (50%), Gaps = 24/194 (12%)
Query: 87 GAFRYLRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
G L L++ DC+R++ AL ++ G+T LK ++LS CV +TD+G+KHL +S+L +L
Sbjct: 290 GGNLALEHLSLQDCQRLSDEALRHVSIGLTTLKSINLSFCVCITDSGLKHLAKMSSLREL 349
Query: 146 WL------SETGLT--ADGIALLSSLQNLSVLDLGGLPVTDLVLRSL-QVLTKLEYLDLW 196
L S+ G+ A+G + +SSL ++S D + D L + Q L L+ L L
Sbjct: 350 NLRSCDNISDIGMAYLAEGGSRISSL-DVSFCD----KIGDQALVHISQGLFNLKLLSLS 404
Query: 197 GSQVSNRG-AAVLKMFPRLSFLNLAWTG-------VTKLPNISSLECLNLSFIQQVGAET 248
Q+S+ G + K L LN+ T ++ L+C++L ++
Sbjct: 405 ACQISDEGICKIAKTLHDLETLNIGQCSRLTDKGLYTIAESMKHLKCIDLYGCTRISTNG 464
Query: 249 -DLVLSLTALQNLN 261
+ ++ L L LN
Sbjct: 465 LERIMKLPQLSTLN 478
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 106/238 (44%), Gaps = 47/238 (19%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSIS------- 140
+ L L + C +T+ L + + LK LDL C +V+D G+ HL ++
Sbjct: 233 LKNLEHLELGGCCNITNGGLLCIAWNLKKLKRLDLRSCWQVSDLGIAHLAGVNRESAGGN 292
Query: 141 -TLEKLWLSETGLTAD--------GIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLE 191
LE L L + +D G+ L S+ NLS + +TD L+ L ++ L
Sbjct: 293 LALEHLSLQDCQRLSDEALRHVSIGLTTLKSI-NLSFC----VCITDSGLKHLAKMSSLR 347
Query: 192 YLDLWGS-QVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDL 250
L+L +S+ G A LA G S + L++SF ++G + +
Sbjct: 348 ELNLRSCDNISDIGMAY-----------LAEGG-------SRISSLDVSFCDKIGDQALV 389
Query: 251 VLSLTALQNLNHLERLNLEQTQVSDATLFPLS-TFKELIHLSLRNAS-LTDVSLHQLS 306
+S Q L +L+ L+L Q+SD + ++ T +L L++ S LTD L+ ++
Sbjct: 390 HIS----QGLFNLKLLSLSACQISDEGICKIAKTLHDLETLNIGQCSRLTDKGLYTIA 443
>gi|229189511|ref|ZP_04316527.1| Internalin [Bacillus cereus ATCC 10876]
gi|228593956|gb|EEK51759.1| Internalin [Bacillus cereus ATCC 10876]
Length = 766
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 136/281 (48%), Gaps = 37/281 (13%)
Query: 41 LADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRY---LRSLNV 97
+ D+ LR L+ +++ L E ++++ E + Y A +Y L+SL V
Sbjct: 197 ITDNKLRELVNKKVFNRKDLNTPITKEELLQVKDLFLNTNEILDY-SALKYMPNLKSLTV 255
Query: 98 ADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGI 157
A+ + + + +A + L L L R + +D + L+ + LE L LS +T +
Sbjct: 256 ANAK-IKDPSFFA--NLKQLSHLAL-RGNEFSD--VTPLVKMDNLESLDLSNNKIT--NV 307
Query: 158 ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 217
A L+ ++N+ L L G + D+ +L + +L+YL+L ++++N A L +++L
Sbjct: 308 APLTEMKNVKSLFLSGNQIEDVT--ALAKMEQLDYLNLANNKITN--VAPLSALKNVTYL 363
Query: 218 NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLS------LTALQNLNHLERLNLEQT 271
LA ++ +I +L L L TDLVL+ L+ ++ + LE L + +
Sbjct: 364 TLAGN---QIEDIKALYSLPL---------TDLVLTRNKVKDLSGIEQMKQLEELWIGKN 411
Query: 272 QVSDATLFPLSTFKELIHLSLRNASLTDVS-LHQLSSLSKL 311
++ D T PLS +L L L N L D++ L L +L KL
Sbjct: 412 EIKDVT--PLSKMTQLKQLHLPNNELKDITPLSSLVNLQKL 450
>gi|147852997|emb|CAN79070.1| hypothetical protein VITISV_031965 [Vitis vinifera]
Length = 661
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 88/203 (43%), Gaps = 11/203 (5%)
Query: 145 LWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG 204
L LS GL + SL L++LDL +TD + + LTKL +LDL +Q++
Sbjct: 100 LILSRMGLNGSISDQIGSLTKLTILDLSHNQLTDPIPHQIGSLTKLTHLDLSFNQLTGPI 159
Query: 205 AAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSFIQQVGAETDLVLSLTALQN 259
+ L++LNL+ +T L ++ L L+LSF Q G + +LT
Sbjct: 160 PHQIGTLTELTYLNLSSNVLTDVIPSSLGRLTKLTHLDLSFNQLTGPIPHQIGTLTE--- 216
Query: 260 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 319
L L L ++D L +L HL L L HQ+ SL+KLT+L +
Sbjct: 217 ---LTYLPLSSNVLTDVIPSSLGRLTKLTHLDLYCNKLIGSIPHQIGSLTKLTHLDLSSN 273
Query: 320 VLTNSGLGSFKPPRSLKLLDLHG 342
LT L L L+ G
Sbjct: 274 QLTGPILNQIGTLIELTYLEFSG 296
>gi|229154996|ref|ZP_04283110.1| Internalin [Bacillus cereus ATCC 4342]
gi|228628554|gb|EEK85267.1| Internalin [Bacillus cereus ATCC 4342]
Length = 766
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 131/280 (46%), Gaps = 26/280 (9%)
Query: 41 LADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRY---LRSLNV 97
+ D+ LR L+ +++ L E ++++ E + Y A +Y L+SL V
Sbjct: 197 ITDNKLRELVNKKVFNRKDLNTPITKEELLQVKDLFLNTNEILDY-SALKYMPNLKSLTV 255
Query: 98 ADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGI 157
A+ + S T + LK L L R + +D + L+ + LE L LS +T +
Sbjct: 256 ANAKIKDPSFF---TSLKQLKHLAL-RGNEFSD--VTPLVKMDHLESLDLSNNKIT--NV 307
Query: 158 ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 217
A L ++N+ L L G + D+ +L + +L+YL+L ++++N A L +++L
Sbjct: 308 APLIEMKNVKSLYLSGNQIEDVT--ALAKMEQLDYLNLANNKITN--VAPLSALKNVTYL 363
Query: 218 NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDAT 277
LA + + + SL +L + + V L+ ++ + LE L + + ++ D T
Sbjct: 364 TLAGNQIEDIKPLYSLPLTDLVLTR------NKVKDLSGIEQMKQLEELWIGKNEIKDVT 417
Query: 278 LFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 317
PLS +L L L N L D++ LSSL L L +
Sbjct: 418 --PLSKMTQLKELHLPNNELKDIT--PLSSLVNLQKLDLE 453
>gi|365162122|ref|ZP_09358255.1| hypothetical protein HMPREF1014_03718 [Bacillus sp. 7_6_55CFAA_CT2]
gi|363619035|gb|EHL70365.1| hypothetical protein HMPREF1014_03718 [Bacillus sp. 7_6_55CFAA_CT2]
Length = 755
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 137/286 (47%), Gaps = 38/286 (13%)
Query: 41 LADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRY---LRSLNV 97
+ D+ LR L+ +++ L E ++++ E + Y A +Y L+SL V
Sbjct: 186 ITDNKLRELVNKKVFNRKDLNTPITKEELLQVKDLFLNTNEILDY-SALKYMPNLKSLTV 244
Query: 98 ADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGI 157
A+ + + + +A + L L L R + +D + L+ + LE L LS +T +
Sbjct: 245 ANAK-IKDPSFFA--NLKQLSHLAL-RGNEFSD--VTPLVKMDNLESLDLSNNKIT--NV 296
Query: 158 ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 217
A L+ ++N+ L L G + D+ +L + +L+YL+L ++++N A L +++L
Sbjct: 297 APLTEMKNVKSLFLSGNQIEDVT--ALAKMEQLDYLNLANNKITN--VAPLSALKNVTYL 352
Query: 218 NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLS------LTALQNLNHLERLNLEQT 271
LA ++ +I +L L L TDLVL+ L+ ++ + LE L + +
Sbjct: 353 TLAGN---QIEDIKALYSLPL---------TDLVLTRNKVKDLSGIEQMKQLEELWIGKN 400
Query: 272 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 317
++ D T PLS +L L L N L D++ LSSL L L +
Sbjct: 401 EIKDVT--PLSKMTQLKQLHLPNNELKDIT--PLSSLVNLQKLDLE 442
>gi|167861956|gb|ACA05677.1| InlA [Listeria monocytogenes]
Length = 800
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 119/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 161 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 216
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L L L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 217 NKVS--DISVLARLPTLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 270
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 271 SLTNLTDLDLANNQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 325
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
>gi|330833202|ref|YP_004402027.1| hypothetical protein SSUST3_1420 [Streptococcus suis ST3]
gi|386584599|ref|YP_006081002.1| putative lipoprotein [Streptococcus suis D9]
gi|329307425|gb|AEB81841.1| putative lipoprotein [Streptococcus suis ST3]
gi|353736745|gb|AER17754.1| putative lipoprotein [Streptococcus suis D9]
Length = 858
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 13/159 (8%)
Query: 158 ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 217
A L + N+ VL +G P+ D+ + + KL+ LW + + LK P L +
Sbjct: 533 AGLDLMPNVEVLGIGFTPIDDV--KPILQFKKLK--QLWMTSTGVKDYQFLKEIPTLEGI 588
Query: 218 NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDAT 277
+L+ GV+ L + E NL + G + + +T L L LE LNL+ +V+D
Sbjct: 589 DLSQNGVSDLGFLE--EFPNLKVVSAAGND---IEDITILAKLKALESLNLDHNKVTD-- 641
Query: 278 LFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 316
L PL+ +L +SL N +TD+S L + KLT L I
Sbjct: 642 LSPLADLSQLTAVSLDNNRITDLSA--LQNKKKLTRLYI 678
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 102/234 (43%), Gaps = 24/234 (10%)
Query: 120 LDLSRCVKVTDAG------MKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 173
LDL V+V G +K +L L++LW++ TG+ L + L +DL
Sbjct: 535 LDLMPNVEVLGIGFTPIDDVKPILQFKKLKQLWMTSTGVK--DYQFLKEIPTLEGIDLSQ 592
Query: 174 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 233
V+DL L+ L+ + G+ + + +L L LNL VT L ++
Sbjct: 593 NGVSDLGF--LEEFPNLKVVSAAGNDIED--ITILAKLKALESLNLDHNKVTDLSPLA-- 646
Query: 234 ECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 293
+LS + V + + + L+ALQN L RL + Q D + +E L+
Sbjct: 647 ---DLSQLTAVSLDNNRITDLSALQNKKKLTRLYISQNPQLDISTLKTENLEE---LTAN 700
Query: 294 NASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLT 347
+++ D+ + + LT+L++++ +T L + L LD+ G + T
Sbjct: 701 ESNVKDLQF--VKNNPNLTSLTLKNNKITE--LQGIEENEKLVNLDVEGNQIKT 750
>gi|423414880|ref|ZP_17392000.1| hypothetical protein IE1_04184 [Bacillus cereus BAG3O-2]
gi|423429338|ref|ZP_17406342.1| hypothetical protein IE7_01154 [Bacillus cereus BAG4O-1]
gi|401097800|gb|EJQ05822.1| hypothetical protein IE1_04184 [Bacillus cereus BAG3O-2]
gi|401121644|gb|EJQ29433.1| hypothetical protein IE7_01154 [Bacillus cereus BAG4O-1]
Length = 760
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 118/239 (49%), Gaps = 37/239 (15%)
Query: 88 AFRY---LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEK 144
A +Y L+SL VA+ + + + +A + L L L R + +D + L+ + LE
Sbjct: 237 ALKYMPNLKSLTVANAK-IKDPSFFA--NLKQLSHLAL-RGNEFSD--VTPLVKMDNLES 290
Query: 145 LWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG 204
L LS +T +A L+ ++N+ L L G + D+ +L + +L+YL+L ++++N
Sbjct: 291 LDLSNNKIT--NVAPLTEMKNVKSLFLSGNQIEDVT--ALAKMEQLDYLNLANNKITN-- 344
Query: 205 AAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLS------LTALQ 258
A L +++L LA ++ +I +L L L TDLVL+ L+ ++
Sbjct: 345 VAPLSALKNVTYLTLAGN---QIEDIKALYSLPL---------TDLVLTRNKVKDLSGIE 392
Query: 259 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 317
+ LE L + + ++ D T PLS +L L L N L D++ LSSL L L +
Sbjct: 393 QMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT--PLSSLVNLQKLDLE 447
>gi|356508335|ref|XP_003522913.1| PREDICTED: EIN3-binding F-box protein 1-like [Glycine max]
Length = 650
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 130/277 (46%), Gaps = 25/277 (9%)
Query: 60 LEVFKHNAEAI---ELRGENSVDAEWMAYLG---AFRYLRSLNVADCRRVTSSALWAL-T 112
L V H +AI L G +V +G + + L SL V+ CR +T +++ A+
Sbjct: 318 LAVIGHYGKAILNLVLCGLQNVTERGFWVMGVAQSLQKLMSLTVSSCRGITDASIEAMGK 377
Query: 113 GMTCLKELDLSRCVKVTDAGMKHLLSI-STLEKLWLSET------GLTADGIALLSSLQN 165
G LK++ L RC V+D G+ + S+LE L L E G+ S+L++
Sbjct: 378 GCVNLKQMFLRRCCFVSDNGLVAFSKVASSLESLHLEECNNINQFGIICALSNFKSTLKS 437
Query: 166 LSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS-QVSNRG-AAVLKMFPRLSFLNL---- 219
L++L G+ DL + L +L + V N A V K+ P+L ++L
Sbjct: 438 LTLLKCKGVKDIDLEVSMFPPCESLRHLSIHNCPGVGNASLAMVGKLCPQLQHVDLTGLY 497
Query: 220 AWTGVTKLPNISSLECLNLSFIQQVGA--ETDLVLSLTALQNLNHLERLNLEQT-QVSDA 276
T +P + + E L + VG TD ++S+ A + LE LNL+ +++DA
Sbjct: 498 GLTDAGLVPLLENCE-AGLVKVNLVGCWNLTDNIVSVLATLHGGTLELLNLDGCRKITDA 556
Query: 277 TLFPLSTFKELIH-LSLRNASLTDVSLHQLSSLSKLT 312
+L ++ L++ L + ++TD + LSS +LT
Sbjct: 557 SLVAIADNCLLLNDLDVSKCAITDAGIAVLSSAKQLT 593
>gi|290970571|ref|XP_002668179.1| predicted protein [Naegleria gruberi]
gi|284081412|gb|EFC35435.1| predicted protein [Naegleria gruberi]
Length = 592
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 74/146 (50%), Gaps = 2/146 (1%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
+N +D E ++ + L SL + + + +++ M L LD+S ++ D G+K
Sbjct: 406 KNEIDGEGAKFISGMKQLTSLTIYK-NGIGDEGVKSISEMKQLTSLDISNN-RIGDEGVK 463
Query: 135 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 194
+ + L L +S + +G +S ++ L+ LD+ G + D ++S+ + +L L+
Sbjct: 464 SISEMEQLISLDISTNVIGGEGAKFISEMKQLTSLDISGNLIYDEGVKSISEMKQLTSLN 523
Query: 195 LWGSQVSNRGAAVLKMFPRLSFLNLA 220
+ G+Q+ GA + +L+ L+++
Sbjct: 524 ISGNQIGVEGAKFISEMKQLTSLDIS 549
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 110/245 (44%), Gaps = 12/245 (4%)
Query: 111 LTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLD 170
++GM L +D+S ++ G K + + L L +S + +G +S +++L+ LD
Sbjct: 129 ISGMKQLTSVDISGN-RIGIEGAKSISEMKQLTSLNISNNIIGVEGAKSISGMKHLTSLD 187
Query: 171 LGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVT 225
+ G + D ++S+ + +L LD+ + + GA + +L+ L++ + G
Sbjct: 188 ISGNRIGDEGVKSISEMEQLISLDISTNVIGGEGAKFISEMKQLTSLDIFYNRIGGEGAK 247
Query: 226 KLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFK 285
+ + L LN+S ++ E ++S + L LN+ + + +S K
Sbjct: 248 LISEMKQLTSLNIS-TNEIDVEGSKLIS-----EMKQLTSLNISGNLIGVEGVKSISGMK 301
Query: 286 ELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 345
+L L++ + D +S + +LT+L I + + + G+ S + L D+ +
Sbjct: 302 QLTSLNISGNLIGDEGAKLISEMKQLTSLDIYNNRIGDEGVKSISEMKQLTSFDISNNLI 361
Query: 346 LTEDA 350
E A
Sbjct: 362 YDEGA 366
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/280 (18%), Positives = 122/280 (43%), Gaps = 13/280 (4%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + E ++ + L SL++ R+ ++ M L L++S ++ G K
Sbjct: 215 NVIGGEGAKFISEMKQLTSLDIF-YNRIGGEGAKLISEMKQLTSLNISTN-EIDVEGSKL 272
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ + L L +S + +G+ +S ++ L+ L++ G + D + + + +L LD+
Sbjct: 273 ISEMKQLTSLNISGNLIGVEGVKSISGMKQLTSLNISGNLIGDEGAKLISEMKQLTSLDI 332
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSFIQQVGAETDL 250
+ +++ + G + +L+ +++ G + + L L +S ++G E
Sbjct: 333 YNNRIGDEGVKSISEMKQLTSFDISNNLIYDEGAKSISGMKQLTSLTISN-NRIGGE--- 388
Query: 251 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 310
+ + + L LN+ + ++ +S K+L L++ + D + +S + +
Sbjct: 389 --GVKFISEIKQLTSLNISKNEIDGEGAKFISGMKQLTSLTIYKNGIGDEGVKSISEMKQ 446
Query: 311 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 350
LT+L I + + + G+ S L LD+ + E A
Sbjct: 447 LTSLDISNNRIGDEGVKSISEMEQLISLDISTNVIGGEGA 486
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 48/264 (18%), Positives = 112/264 (42%), Gaps = 25/264 (9%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + E + + L SL++ + R+ + +++ M L D+S + + D G K
Sbjct: 311 NLIGDEGAKLISEMKQLTSLDIYN-NRIGDEGVKSISEMKQLTSFDISNNL-IYDEGAKS 368
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ + L L +S + +G+ +S ++ L+ L++ + + + + +L L +
Sbjct: 369 ISGMKQLTSLTISNNRIGGEGVKFISEIKQLTSLNISKNEIDGEGAKFISGMKQLTSLTI 428
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLS----------F 240
+ + + + G + +L+ L+++ GV + + L L++S F
Sbjct: 429 YKNGIGDEGVKSISEMKQLTSLDISNNRIGDEGVKSISEMEQLISLDISTNVIGGEGAKF 488
Query: 241 IQQVGAETDLVLS--------LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL 292
I ++ T L +S + ++ + L LN+ Q+ +S K+L L +
Sbjct: 489 ISEMKQLTSLDISGNLIYDEGVKSISEMKQLTSLNISGNQIGVEGAKFISEMKQLTSLDI 548
Query: 293 RNASLTDVSLHQLSSLSKLTNLSI 316
+ D +S + +LT+L +
Sbjct: 549 SKNEIGDAGAKFISEMKQLTSLDV 572
>gi|254540164|ref|NP_536716.2| relaxin receptor 2 precursor [Mus musculus]
gi|341941992|sp|Q91ZZ5.2|RXFP2_MOUSE RecName: Full=Relaxin receptor 2; AltName: Full=G-protein coupled
receptor 106; AltName: Full=G-protein coupled receptor
affecting testicular descent; AltName: Full=Leucine-rich
repeat-containing G-protein coupled receptor 8; AltName:
Full=Relaxin family peptide receptor 2
gi|111307427|gb|AAI20742.1| Relaxin/insulin-like family peptide receptor 2 [Mus musculus]
Length = 737
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 105/240 (43%), Gaps = 18/240 (7%)
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
+T + L + L+ L+LS +T+ + L L+ L L P+T + +S L
Sbjct: 156 ITHISRRAFLGLHNLQILYLSHNCITSLRPGIFKDLHQLAWLILDDNPITRISQKSFMGL 215
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFI----QQ 243
L +L + G+++ + P+L++++LA G+ + N + L C +L+ + Q
Sbjct: 216 NSLFFLSMVGNRLEALPETLCAQMPQLNWVDLANNGIKYITNSTFLTCDSLTVLFLPRNQ 275
Query: 244 VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLH 303
+G + S +L +L L+L ++ + S L L+L + L V +
Sbjct: 276 IGFVPEKTFS-----SLKNLGELDLSSNMITKLPVHLFSDLHLLQKLNLSSNPLLYVHKN 330
Query: 304 QLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEV 363
Q SL +L +L + + N G F+P ++L + L ++C P + +
Sbjct: 331 QFGSLKQLQSLDLERIEIPNISTGMFQPMKNLSHIYL---------KTFRYCSYVPHVRI 381
>gi|290970038|ref|XP_002668017.1| predicted protein [Naegleria gruberi]
gi|284081041|gb|EFC35273.1| predicted protein [Naegleria gruberi]
Length = 306
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 112/270 (41%), Gaps = 41/270 (15%)
Query: 86 LGAFRYL-----RSLNVADCRRVTS----------SALWALTGMTCLKELDLSRCVKVTD 130
L FRYL + ++D +R+TS + ++GM L LD+S + +D
Sbjct: 57 LKVFRYLLDSFEKLKFISDMKRLTSLDISFNQIGVQGVKFISGMKQLTSLDIS-FNQASD 115
Query: 131 AGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKL 190
G K++ + L L +S+ + +G +S ++ L+ L+L + D + + + +L
Sbjct: 116 EGAKYISEMKQLTSLGISKNLIGDEGAKYISEMKQLTSLNLYYNEICDEGAKYISEMEQL 175
Query: 191 EYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDL 250
LD+ + + G +K +L+ LN+ + G +G E
Sbjct: 176 TSLDISSNLIDVEGVKFIKEMKQLTSLNIYYNG--------------------IGVEGAK 215
Query: 251 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 310
+S + L LN+ ++ D +S K+LI L + + D + + +
Sbjct: 216 YIS-----EMKQLTSLNITNNEIGDEGAKYISEMKQLISLIISRNQIGDEGAKYICEMEQ 270
Query: 311 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
LT+L+I + + G + L LD+
Sbjct: 271 LTSLNISGNEIGDEGAKYISDMKQLTSLDI 300
>gi|449458744|ref|XP_004147107.1| PREDICTED: F-box/LRR-repeat protein 20-like [Cucumis sativus]
gi|449503502|ref|XP_004162034.1| PREDICTED: F-box/LRR-repeat protein 20-like [Cucumis sativus]
Length = 421
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 138/317 (43%), Gaps = 29/317 (9%)
Query: 21 GESVQKW-RRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVD 79
G ++W R Q ++L A LLR + R F LLE+ + + D
Sbjct: 47 GLVCKRWLRVQSNERKKLSARAGPHLLRKMASR---FSRLLELDLSQSTSRSFY-PGVTD 102
Query: 80 AEWMAYLGAFRYLRSLNVADCRRVTSSALWAL-TGMTCLKELDLSRCVKVTDAGMKHLL- 137
++ F+YL LN+ C+ ++ S L A+ +G++ L+ LD+S C K+TD G +
Sbjct: 103 SDLTVVANGFQYLIVLNLQYCKSISDSGLAAIGSGLSKLQSLDVSYCRKLTDKGFSAVAE 162
Query: 138 SISTLEKLWLSETGLTADGI--ALLSSLQNLSVLDLGGLP-VTDLVLRSL-QVLTKLEYL 193
+ L L+ L DG+ L + +L L L G +TD LR L + K+E L
Sbjct: 163 GCRDIRNLNLAGCKLVTDGLLKTLSKNCHSLEELGLHGCTNITDSGLRELVKGCQKIEIL 222
Query: 194 DLWGSQVSNRG-----------AAVLKMFPRLSFLNLAWTGVTKLPNI-SSLECLNLSFI 241
D+ ++ SN G ++ LK F L + + L ++LE L +
Sbjct: 223 DV--NKCSNVGDVGVSSVSKACSSSLKTFKLLDCYKIKDDSILSLAEFCNNLETLIIGGC 280
Query: 242 QQVGAETDLVLSLTALQNLNHLERLN--LEQTQVSDATLFPLSTFKELIHLSLRNASLTD 299
+ + E+ L+L NL L R++ L T S + +F + E + + +TD
Sbjct: 281 RDISDESIQKLALACKSNLRTL-RMDWCLNITDSSLSCIFTHCSNLEALDIGCCE-EVTD 338
Query: 300 VSLHQLSSLSKLTNLSI 316
+ H L S NL +
Sbjct: 339 AAFHSLGSDGIEVNLKV 355
>gi|284040762|ref|YP_003390692.1| ribonuclease inhibitor [Spirosoma linguale DSM 74]
gi|283820055|gb|ADB41893.1| Leucine-rich repeat, ribonuclease inhibitor subtype [Spirosoma
linguale DSM 74]
Length = 507
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 12/130 (9%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
R A+ ++++ +W G T +++DA + + + L+KL L E
Sbjct: 366 RSFNDAQAAELPKLSNQIVWLKLGDT-----------EISDAALAQVAKLKNLQKLHLEE 414
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
T +T G+ L L L L+L G PVTD L L L L+ + LW ++VS G A LK
Sbjct: 415 TKVTDAGLKQLKGLAYLEYLNLYGTPVTDAGLAELAELKSLKTVYLWQTKVSEEGIARLK 474
Query: 210 M-FPRLSFLN 218
P+L +
Sbjct: 475 TALPKLEVIG 484
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
Query: 261 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV 320
N + L L T++SDA L ++ K L L L +TD L QL L+ L L++
Sbjct: 381 NQIVWLKLGDTEISDAALAQVAKLKNLQKLHLEETKVTDAGLKQLKGLAYLEYLNLYGTP 440
Query: 321 LTNSGLGSFKPPRSLKLLDLHGGWL--LTEDAILQFCKMHPRIEV 363
+T++GL +SLK + L W ++E+ I + P++EV
Sbjct: 441 VTDAGLAELAELKSLKTVYL---WQTKVSEEGIARLKTALPKLEV 482
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%)
Query: 147 LSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAA 206
L +T ++ +A ++ L+NL L L VTD L+ L+ L LEYL+L+G+ V++ G A
Sbjct: 388 LGDTEISDAALAQVAKLKNLQKLHLEETKVTDAGLKQLKGLAYLEYLNLYGTPVTDAGLA 447
Query: 207 VLKMFPRLSFLNLAWTGVTK 226
L L + L T V++
Sbjct: 448 ELAELKSLKTVYLWQTKVSE 467
>gi|290984372|ref|XP_002674901.1| predicted protein [Naegleria gruberi]
gi|284088494|gb|EFC42157.1| predicted protein [Naegleria gruberi]
Length = 599
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 124/275 (45%), Gaps = 31/275 (11%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N + +RG N D + + +G F+ L +LNV C + ++ G+ L LDLS
Sbjct: 337 NLTFLTIRGRNIADGD-LECIGQFKKLTTLNVPSCN--INQGFKSICGLKNLTFLDLSY- 392
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
K+ ++ + ++ +L +L ++ + +G +S L NL+ L +G + D ++ L
Sbjct: 393 NKI--ESVESITNLKSLTQLDINGNRIGHEGAKSISQLDNLTNLQIGHNLIQDEGIKYLS 450
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVG 245
+ L L + +Q+S GA ++K ++SL+ N + I+ G
Sbjct: 451 TMQCLTTLGVAENQISIEGAKF----------------ISKSHQLTSLDLTN-NVIETEG 493
Query: 246 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 305
A+ L LN+L L + ++ D +ST ++L L + +TD +
Sbjct: 494 AKI--------LSELNNLTGLFVYGNRIRDEGAKYISTMQQLTILDIAYNEITDEGAKAI 545
Query: 306 SSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
S+L +L+ L I + + G S + L +LD+
Sbjct: 546 SNLDQLSTLYIYSNEICDEGAKSICGMKQLTILDI 580
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 127/297 (42%), Gaps = 50/297 (16%)
Query: 78 VDAEWMAYLGAFRYLR----SLNVADCR-RVTSSALWALTGMTCLKELDLSRCVKVTDAG 132
++AE + ++G + L SLN +C+ +T S L LT + + K+ G
Sbjct: 110 LEAEDVNFIGEMKQLTELDISLNNINCKGAITISQLSKLTKLNVYQ-------TKMGVEG 162
Query: 133 MKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLG-------------------G 173
K L + L L + + L ++G A ++ ++ L+ LD+
Sbjct: 163 AKELSKLKELTSLEIGDNHLKSEGAAHIAQMRKLTFLDINTNMIGNEGIELISRMEQLTD 222
Query: 174 LPVTDLVLRS--LQVLTKLEY---LDLWGSQVSNRGAAVLKMFPRLSFL-----NLAWTG 223
L V D +RS ++ L K+++ L++ + + + GA +L +L L N+ G
Sbjct: 223 LDVMDNNIRSEGVKSLCKMKHLTNLNIGNNPIEDEGAILLGEMKQLKNLITACNNIGMKG 282
Query: 224 VTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLST 283
+ L + +LE +L + G TD + + +N L RL + + P+S
Sbjct: 283 FSSLSTLLNLE--SLVILGLDGKSTDFI------REMNQLTRLEFYGSNLEPKGFDPISH 334
Query: 284 FKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
L L++R ++ D L + KLT L++ + N G S ++L LDL
Sbjct: 335 LSNLTFLTIRGRNIADGDLECIGQFKKLTTLNVPSCNI-NQGFKSICGLKNLTFLDL 390
>gi|315301242|ref|ZP_07872475.1| internalin A [Listeria ivanovii FSL F6-596]
gi|313630386|gb|EFR98286.1| internalin A [Listeria ivanovii FSL F6-596]
Length = 595
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 118/267 (44%), Gaps = 53/267 (19%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
GEN++ + + + SL D S L L +T L+ L L + ++D +
Sbjct: 105 GENNI-----SDISQLSGVTSLTYVDVGENNISNLSPLANLTNLESLGLDKN-NISD--I 156
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLV------------- 180
+L +S L L L++ L D ++ +S L NL L GG ++DL
Sbjct: 157 SNLAGLSKLSNLSLNDNNL--DNLSDVSGLINLKELKAGGNSISDLTPLSNLINMVSLYL 214
Query: 181 -------LRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 233
L L LTK++YL+L+ + +SN +V+ F + L L +T + +++L
Sbjct: 215 ADNNISDLSPLAKLTKIDYLNLYTNNISN--ISVVANFTDIWGLYLGENNITDIAVLTNL 272
Query: 234 ECL-----------------NLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD- 275
L NL+ + ++ + + L L NL +LE L LE ++SD
Sbjct: 273 TGLGELHLADNDIGDISNLANLTNLTELQLDNTNITDLNPLSNLTNLEYLYLENNRISDI 332
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSL 302
+L PLS L+ L L N + D+S+
Sbjct: 333 KSLQPLS---NLLFLDLDNNQIRDISI 356
>gi|386586655|ref|YP_006083057.1| putative lipoprotein [Streptococcus suis D12]
gi|353738801|gb|AER19809.1| putative lipoprotein [Streptococcus suis D12]
Length = 858
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 13/159 (8%)
Query: 158 ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 217
A L + N+ VL +G P+ D+ + + KL+ LW + + LK P L +
Sbjct: 533 AGLDLMPNVEVLGIGFTPIDDV--KPILQFKKLK--QLWMTSTGVKDYQFLKEIPTLEGI 588
Query: 218 NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDAT 277
+L+ GV+ L + E NL + G + + +T L L LE LNL+ +V+D
Sbjct: 589 DLSQNGVSDLGFLE--EFPNLKVVSAAGND---IEDITILAKLKALESLNLDHNKVTD-- 641
Query: 278 LFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 316
L PL+ +L +SL N +TD+S L + KLT L I
Sbjct: 642 LSPLADLSQLTAVSLDNNRITDLSA--LQNKKKLTRLYI 678
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 94/223 (42%), Gaps = 38/223 (17%)
Query: 120 LDLSRCVKVTDAG------MKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 173
LDL V+V G +K +L L++LW++ TG+ L + L +DL
Sbjct: 535 LDLMPNVEVLGIGFTPIDDVKPILQFKKLKQLWMTSTGVK--DYQFLKEIPTLEGIDLSQ 592
Query: 174 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 233
V+DL L+ L+ + G+ + + +L L LNL VT L ++
Sbjct: 593 NGVSDLGF--LEEFPNLKVVSAAGNDIED--ITILAKLKALESLNLDHNKVTDLSPLA-- 646
Query: 234 ECLNLSFIQQVGAETDLVLSLTALQNLNHLERL----------------NLEQTQVSDAT 277
+LS + V + + + L+ALQN L RL NLE+ +++
Sbjct: 647 ---DLSQLTAVSLDNNRITDLSALQNKKKLTRLYISLNPQLDISTLKTENLEELTANESN 703
Query: 278 LFPLSTFK---ELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 317
+ L K L L+L+N +T+ L + KL NL +
Sbjct: 704 VKDLQFVKNNPNLTSLTLKNNKITE--LQGIEENEKLVNLDVE 744
>gi|260804809|ref|XP_002597280.1| hypothetical protein BRAFLDRAFT_260896 [Branchiostoma floridae]
gi|229282543|gb|EEN53292.1| hypothetical protein BRAFLDRAFT_260896 [Branchiostoma floridae]
Length = 398
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 31/164 (18%)
Query: 88 AFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHL---------LS 138
+ L+SLN++ C ++ + L M+ LKEL+L C ++D G+ HL L
Sbjct: 227 GLQRLKSLNLSFCCGISDGGMMYLAKMSSLKELNLRSCDNISDIGIAHLADGSATISHLD 286
Query: 139 ISTLEKLWLSETGLTADGIA-------------------LLSSLQNLSVLDLG-GLPVTD 178
+S +K+ S G A G+ ++ S+ L+ LD+G +TD
Sbjct: 287 VSFCDKVGDSALGHIAHGLYHLHSLSLGSCNISDEGLNRMVRSMHELTTLDIGQCYKITD 346
Query: 179 LVLRSL-QVLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLA 220
L + LT+L +DL+G ++++ G + PRLS LNL
Sbjct: 347 KGLGLIADNLTQLTNIDLYGCTKITTAGLERIMQLPRLSVLNLG 390
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 104/227 (45%), Gaps = 29/227 (12%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLS--ISTLEKLWL 147
R +R + + RR S + + GM+ + L+LS C +TD G+ H + + +L +L L
Sbjct: 69 RGIRKVQILSLRRSLS---YVVQGMSNIVSLNLSGCYNLTDIGLSHAFTQDVPSLTELNL 125
Query: 148 SETGLTADGI--ALLSSLQNLSVLDLGG---LPVTDLVLRSLQVLTKLEYLDLWGS-QVS 201
S D + L+NL LDLGG + T L+L + +L KL YL+L +S
Sbjct: 126 SLCKQITDSSLGRIAQYLKNLERLDLGGCCNITNTGLLLCAWGLL-KLRYLNLRSCRHIS 184
Query: 202 NRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLN 261
+ G L + A G L ++ +C L TDL L + + L
Sbjct: 185 DVGIGHLSGISK-----NAAEGCLHLEHLCLQDCQKL---------TDLALKHVS-KGLQ 229
Query: 262 HLERLNLE-QTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLS 306
L+ LNL +SD + L+ L L+LR+ +++D+ + L+
Sbjct: 230 RLKSLNLSFCCGISDGGMMYLAKMSSLKELNLRSCDNISDIGIAHLA 276
>gi|440904152|gb|ELR54702.1| F-box/LRR-repeat protein 2, partial [Bos grunniens mutus]
Length = 403
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 151/323 (46%), Gaps = 21/323 (6%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC-LKELDLSRCVK 127
+ LRG V D+ + R + LN+ C ++T S ++L+ LK LDL+ CV
Sbjct: 82 LSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVS 141
Query: 128 VTDAGMKHLL-SISTLEKLWLSETG-LTADGI-ALLSSLQNLSVLDLGGLP-VTDLVLRS 183
+T++ +K + LE L LS +T DG+ AL+ + L L L G + D L+
Sbjct: 142 ITNSSLKGISEGCRHLEYLNLSWCDQITKDGVEALVRGCRGLRALLLRGCTQLEDEALKH 201
Query: 184 LQ-VLTKLEYLDLWG-SQVSNRGAAVL-KMFPRLSFLNLAWTGVTKLPNISSLECLNLSF 240
+Q +L L+L S+V++ G L + PRL G+T++P + C
Sbjct: 202 IQNYCHELVSLNLQSCSRVTDDGVVQLCRGCPRLHLSLHFLMGITQVPTRLASSCHYFDM 261
Query: 241 I---QQVGAETDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTF-KELIHLSLRNA 295
I + TD +L A +N + LE+++LE+ ++D TL LS +L LSL +
Sbjct: 262 ILEAARCSHLTDAGFTLLA-RNCHDLEKMDLEECILITDRTLTQLSIHCPKLQALSLSHC 320
Query: 296 SL-TDVSLHQLSS----LSKLTNLSIRDAVL-TNSGLGSFKPPRSLKLLDLHGGWLLTED 349
L TD + LS+ +L L + + +L T+ L + R L+ L+L+ +T
Sbjct: 321 ELITDDGILHLSNSPCGHERLRVLELDNCLLITDVALEHLEHCRGLERLELYDCQQVTRA 380
Query: 350 AILQFCKMHPRIEVWHELSVICP 372
I + P + V + + P
Sbjct: 381 GIKRMRAQLPHVRVHAYFAPVTP 403
>gi|303279969|ref|XP_003059277.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459113|gb|EEH56409.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 360
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 104/220 (47%), Gaps = 20/220 (9%)
Query: 33 SLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNA-------EAIELRGENSV-DAEWMA 84
++ER+ D+++R L RL F LE A E + L G SV D +A
Sbjct: 74 AIERVTC-FGDAVVRGLRTLRLEFALRLEDSHVAALAPSATLEDVNLNGAQSVGDDAVIA 132
Query: 85 YLGAFRYLRSLNVADCRRVTSSALWALTGMTC--LKELDLSRCVKVTDAGMKHLLSISTL 142
A LR + + RVT A+ L +C L+ ++LS C ++TDA K L + +
Sbjct: 133 IARANPGLRDIGLYWNVRVTDDAIATLCA-SCPALRSINLSGCKRLTDASAKSLSKLRRV 191
Query: 143 EKLWLSETGLTADGIALL----SSLQNLSVLDL-GGLPVTDLVLRSLQVLTKLEYLDLWG 197
E L L+ T DG+ + +L L+L T R + VL++L +LD+ G
Sbjct: 192 ESLNLTRCAFTDDGLTAIVLSPGIADHLVSLNLYAAARYTSRAYRCVGVLSQLTFLDVCG 251
Query: 198 SQ-VSNRGAA-VLKMFPRLSFLNLAW-TGVTKLPNISSLE 234
SQ +S+ A + + P L +LN++W VT + ++ E
Sbjct: 252 SQEISDDAVAEIAEGCPLLEYLNMSWCNAVTDVGFVAVAE 291
>gi|167887269|gb|ACA09294.1| InlE [Listeria monocytogenes]
Length = 186
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 91/189 (48%), Gaps = 35/189 (18%)
Query: 156 GIALLSSLQ---NLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMF 211
GI + LQ NLS L+L VTDL L LTK+ L+L G+ + + A A LK
Sbjct: 4 GITTIEGLQYLTNLSELELIDNQVTDL--NPLTNLTKITELELSGNPLKDVSALAGLKNL 61
Query: 212 PRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 271
+ + T VT L +S+L+ LNL Q + +T L L++L+ L+ T
Sbjct: 62 KTMDLIYTDITDVTPLAGLSNLQVLNLDINQ--------ITDITPLAGLSNLQFLSFGST 113
Query: 272 QVSDATLFPLSTFKELIHLSLRNASLTDVS-----------------LHQLSSLSKLTNL 314
QVSD T PL+ +L L+ N+ ++DVS + +S L+KL NL
Sbjct: 114 QVSDLT--PLANLSKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQISDVSPLAKLPNL 171
Query: 315 SIRDAVLTN 323
SI LTN
Sbjct: 172 SI--VTLTN 178
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 22/197 (11%)
Query: 106 SALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQN 165
+ + L +T L EL+L +VTD + L +++ + +L LS G ++ L+ L+N
Sbjct: 6 TTIEGLQYLTNLSELELIDN-QVTD--LNPLTNLTKITELELS--GNPLKDVSALAGLKN 60
Query: 166 LSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV- 224
L +DL +TD+ L L+ L+ L+L +Q+++ L L FL+ T V
Sbjct: 61 LKTMDLIYTDITDV--TPLAGLSNLQVLNLDINQITD--ITPLAGLSNLQFLSFGSTQVS 116
Query: 225 --TKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 282
T L N+S L LN A V ++ L L++L + LE+ Q+SD + PL+
Sbjct: 117 DLTPLANLSKLTTLN--------AMNSKVSDVSPLTGLSNLTEVYLEENQISDVS--PLA 166
Query: 283 TFKELIHLSLRNASLTD 299
L ++L N ++T+
Sbjct: 167 KLPNLSIVTLTNQTITN 183
>gi|302024248|ref|ZP_07249459.1| Streptococcal histidine triad-family protein [Streptococcus suis
05HAS68]
Length = 836
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 13/159 (8%)
Query: 158 ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 217
A L + N+ VL +G P+ D+ + + KL+ LW + + LK P L +
Sbjct: 533 AGLDLMPNVEVLGIGFTPIDDV--KPILQFKKLK--QLWMTSTGVKDYQFLKEIPTLEGI 588
Query: 218 NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDAT 277
+L+ GV+ L + E NL + G + + +T L L LE LNL+ +V+D
Sbjct: 589 DLSQNGVSDLGFLE--EFPNLKVVSAAGND---IEDITILAKLKALESLNLDHNKVTD-- 641
Query: 278 LFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 316
L PL+ +L +SL N +TD+S L + KLT L I
Sbjct: 642 LSPLADLSQLTAVSLDNNRITDLSA--LQNKKKLTRLYI 678
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 102/234 (43%), Gaps = 24/234 (10%)
Query: 120 LDLSRCVKVTDAG------MKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 173
LDL V+V G +K +L L++LW++ TG+ L + L +DL
Sbjct: 535 LDLMPNVEVLGIGFTPIDDVKPILQFKKLKQLWMTSTGVK--DYQFLKEIPTLEGIDLSQ 592
Query: 174 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 233
V+DL L+ L+ + G+ + + +L L LNL VT L ++
Sbjct: 593 NGVSDLGF--LEEFPNLKVVSAAGNDIED--ITILAKLKALESLNLDHNKVTDLSPLA-- 646
Query: 234 ECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 293
+LS + V + + + L+ALQN L RL + Q D + +E L+
Sbjct: 647 ---DLSQLTAVSLDNNRITDLSALQNKKKLTRLYISQNPQLDISTLKTENLEE---LTAN 700
Query: 294 NASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLT 347
+++ D+ + + LT+L++++ +T L + L LD+ G + T
Sbjct: 701 ESNVKDLQF--VKNNPNLTSLTLKNNKITE--LQGIEENEKLVNLDVEGNQIKT 750
>gi|343418611|emb|CCD19670.1| hypothetical protein, conserved in T. vivax [Trypanosoma vivax
Y486]
Length = 840
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 135/286 (47%), Gaps = 28/286 (9%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L R L +L++ DC + L L G+T L+EL L + + V DA ++ L L +L
Sbjct: 353 LARMRSLENLDLNDCTGIVR-GLHVLCGLTTLQELCLWQ-LCVDDAFVRDLTCHERLRRL 410
Query: 146 WL-SETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL---TKLEYLDLWGSQVS 201
L S T +T ++ L+ +++L +L+L G ++R L VL T L+ L LW V
Sbjct: 411 SLNSCTRIT--NVSPLARMRSLEILNLNGCTG---IVRGLHVLCGLTTLQELYLWQLCVD 465
Query: 202 NRGAAVLKMFPRLSFLNLA----WTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTAL 257
+ L RL L+L T V+ L + SLE L+L+ T +V L L
Sbjct: 466 DAFLRDLTCHERLRRLSLNSCTRITDVSPLARMRSLEMLDLN------GCTGIVRGLHVL 519
Query: 258 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSI 316
L L+ L L + V+DA L L+ + L LSL + + +TDVS L+ + L L +
Sbjct: 520 CGLTTLQELCLAEVPVNDALLRDLTCHERLRELSLNSCTRITDVS--PLARMRSLEMLDL 577
Query: 317 RDAVLTNSGLGSFKPPRSLKLLDLHGGW-LLTEDAILQFCKMHPRI 361
D GL +L+ L L W L ++A L+ H R+
Sbjct: 578 NDCTGIVRGLHELCGLTTLQELCL---WQLCVDNAFLRDLTCHERL 620
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 127/281 (45%), Gaps = 18/281 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L R L L++ C + L L G+T L+EL L+ V V DA ++ L L +L
Sbjct: 495 LARMRSLEMLDLNGCTGIVR-GLHVLCGLTTLQELCLAE-VPVNDALLRDLTCHERLREL 552
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
L+ D ++ L+ +++L +LDL L L LT L+ L LW V N
Sbjct: 553 SLNSCTRITD-VSPLARMRSLEMLDLNDCTGIVRGLHELCGLTTLQELCLWQLCVDNAFL 611
Query: 206 AVLKMFPRLSFLNLA----WTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLN 261
L RL L+L T V+ L + SLE L+L+ +G +V L L L
Sbjct: 612 RDLTCHERLRRLSLNSCTRITDVSPLARMRSLEMLDLNGC--IG----IVRGLHELCGLT 665
Query: 262 HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAV 320
L+ L L Q V +A L L+ + L LSL + + +TDVS L+ + L L + D
Sbjct: 666 TLQELYLWQLCVDNAFLRDLTCHERLRRLSLNSCTRITDVS--PLARMRSLEMLDLNDCT 723
Query: 321 LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRI 361
GL +L+ +L+ L +DA L+ H R+
Sbjct: 724 GIVRGLHELCGLTTLQ--ELYLWQLCVDDAFLRDLTCHERL 762
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 136/314 (43%), Gaps = 45/314 (14%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
VD ++ L LR L++ C R+T + L M L+ LDL+ C+ + G+ L
Sbjct: 180 VDDAFLRDLTCHERLRRLSLNSCTRITDVS--PLARMRSLEMLDLNGCIGIV-RGLHELC 236
Query: 138 SISTLEKLWL-------------------------SETGLTADGIALLSSLQNLSVLDLG 172
++TL++L+L S T +T ++ L+ +++L +LDL
Sbjct: 237 GLTTLQELYLWQLCVDNAFLRDLTCHERLRRLSLNSCTRIT--DVSPLARMRSLEMLDLN 294
Query: 173 GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA----WTGVTKLP 228
L L LT L+ L LW V + L RL L+L T V+ L
Sbjct: 295 DCTGIVRGLHELCGLTTLQELYLWQLCVDDAFLRDLTCHERLRRLSLNSCTRITDVSPLA 354
Query: 229 NISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELI 288
+ SLE L+L+ T +V L L L L+ L L Q V DA + L+ + L
Sbjct: 355 RMRSLENLDLNDC------TGIVRGLHVLCGLTTLQELCLWQLCVDDAFVRDLTCHERLR 408
Query: 289 HLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLT 347
LSL + + +T+VS L+ + L L++ GL +L+ +L+ L
Sbjct: 409 RLSLNSCTRITNVS--PLARMRSLEILNLNGCTGIVRGLHVLCGLTTLQ--ELYLWQLCV 464
Query: 348 EDAILQFCKMHPRI 361
+DA L+ H R+
Sbjct: 465 DDAFLRDLTCHERL 478
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 110/255 (43%), Gaps = 36/255 (14%)
Query: 111 LTGMTC---LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLS 167
L +TC L+EL L+ C ++TD + L + +LE L L++ G+ +L L L
Sbjct: 43 LRDLTCHERLRELSLNSCTRITD--VSPLARMRSLEILNLNDCTGIVRGLHVLCGLTTLQ 100
Query: 168 VLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKL 227
L L + V D +R L +L L L N + T V+ L
Sbjct: 101 ELCLANVNVDDAFVRDLTCHERLRRLSL------NSCTRI--------------TDVSPL 140
Query: 228 PNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 287
+ SLE LNL+ T +V L L L L+ L L + V DA L L+ + L
Sbjct: 141 ARMRSLEMLNLNDC------TGIVRGLHELCGLTTLQELYLPKVYVDDAFLRDLTCHERL 194
Query: 288 IHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLL 346
LSL + + +TDVS L+ + L L + + GL +L+ +L+ L
Sbjct: 195 RRLSLNSCTRITDVS--PLARMRSLEMLDLNGCIGIVRGLHELCGLTTLQ--ELYLWQLC 250
Query: 347 TEDAILQFCKMHPRI 361
++A L+ H R+
Sbjct: 251 VDNAFLRDLTCHERL 265
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 102/240 (42%), Gaps = 40/240 (16%)
Query: 77 SVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHL 136
VD ++ L LR L++ C R+T + L M L+ LDL+ C+ + G+ L
Sbjct: 605 CVDNAFLRDLTCHERLRRLSLNSCTRITDVS--PLARMRSLEMLDLNGCIGIV-RGLHEL 661
Query: 137 LSISTLEKLWL-------------------------SETGLTADGIALLSSLQNLSVLDL 171
++TL++L+L S T +T ++ L+ +++L +LDL
Sbjct: 662 CGLTTLQELYLWQLCVDNAFLRDLTCHERLRRLSLNSCTRIT--DVSPLARMRSLEMLDL 719
Query: 172 GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA----WTGVTKL 227
L L LT L+ L LW V + L RL L+L T V+ L
Sbjct: 720 NDCTGIVRGLHELCGLTTLQELYLWQLCVDDAFLRDLTCHERLRRLSLNSCTRITDVSPL 779
Query: 228 PNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 287
+ SLE L+L+ +G +V L L L L+ L L V DA + L+ + L
Sbjct: 780 ARMRSLEMLDLNGC--IG----IVRGLHVLCGLTTLQELCLANVNVDDAFVRGLACHERL 833
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 93/210 (44%), Gaps = 24/210 (11%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVL---TKLEYLDLWGSQVSNRGAAVLKMFPRLSF 216
+ SL+ L + D G ++R L VL T L+ L LW V + L RL
Sbjct: 1 MRSLEMLDLNDCTG------IVRGLHVLCGLTTLQELCLWQLCVDDALLRDLTCHERLRE 54
Query: 217 LNLA----WTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ 272
L+L T V+ L + SLE LNL+ T +V L L L L+ L L
Sbjct: 55 LSLNSCTRITDVSPLARMRSLEILNLNDC------TGIVRGLHVLCGLTTLQELCLANVN 108
Query: 273 VSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP 331
V DA + L+ + L LSL + + +TDVS L+ + L L++ D GL
Sbjct: 109 VDDAFVRDLTCHERLRRLSLNSCTRITDVS--PLARMRSLEMLNLNDCTGIVRGLHELCG 166
Query: 332 PRSLKLLDLHGGWLLTEDAILQFCKMHPRI 361
+L+ +L+ + +DA L+ H R+
Sbjct: 167 LTTLQ--ELYLPKVYVDDAFLRDLTCHERL 194
>gi|321455314|gb|EFX66450.1| hypothetical protein DAPPUDRAFT_302690 [Daphnia pulex]
Length = 397
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 180/400 (45%), Gaps = 68/400 (17%)
Query: 2 ERERESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFP---S 58
+R R +++ + EAA SV + + L R L SL+R IRR I S
Sbjct: 28 DRGRAAQVCQTWKEAAYH--RSVWRSCEPKLHLRRANPSLFPSLVRRGIRRVQILSLRRS 85
Query: 59 LLEVFKH--NAEAIELRGENSVDAEWMAY--LGAFRYLRSLNVADCRRVTSSALWALTGM 114
L +V + N E+++L G +V +A+ L+ LN++ C+++T S+L L
Sbjct: 86 LRDVTQGLPNIESLDLSGCFNVTDIGIAHALTADVPTLKRLNLSLCKQITDSSLSKL-AQ 144
Query: 115 TC--LKELDLSRCVKVTDAGMKHLL-SISTLEKLWLSETGLTAD-GIALLSSLQNLSVLD 170
C L+ELDL C VT+AG+ + + +L+ L L +D GIA SL L
Sbjct: 145 YCRQLQELDLGGCCNVTNAGLLLIAWGLKSLKSLNLRSCWHVSDLGIA---SLAGLGSDA 201
Query: 171 LGGLPVTDLVLRSLQVLT------------KLEYLDL-WGSQVSNRGAAVLKMFPRLSFL 217
G L + L L+ Q LT +L+ ++L + +S+ G L P L+ L
Sbjct: 202 EGNLALEHLGLQDCQKLTDDALMHVSTGLKQLKSINLSFCLSISDSGLKYLAKMPSLAEL 261
Query: 218 NL------AWTGVTKLPNISS-LECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 270
NL + G+ L S + L++SF ++ + + ++ Q L HL++L+L
Sbjct: 262 NLRSCDNISDVGMAYLAEGGSRITSLDVSFCDRIDDQAVVHVA----QGLVHLKQLSLSA 317
Query: 271 TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 330
VSD + LI ++L SL D+ + S++T+ SI+
Sbjct: 318 CHVSD---------EGLIRVAL---SLLDLQTLNIGQCSRITDRSIQAVA---------D 356
Query: 331 PPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEV-----WH 365
R L+ +DL+G +T + + K+ P + V WH
Sbjct: 357 HLRKLRCIDLYGCTKITTSGLEKIMKL-PELSVLNLGLWH 395
>gi|290997674|ref|XP_002681406.1| predicted protein [Naegleria gruberi]
gi|284095030|gb|EFC48662.1| predicted protein [Naegleria gruberi]
Length = 426
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 118/267 (44%), Gaps = 27/267 (10%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + + + + L SL++ + + A + ++ M L LD+S ++ G K
Sbjct: 156 NRIGVQGAKSICEMKQLTSLSIYNNQTGAVGAKF-ISEMKQLTSLDIS-VNEIGVEGAKF 213
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ + L L + + A+G+ L+S ++ L+ LD+GG + D + + + +L L++
Sbjct: 214 ISEMKQLTSLNICYNRIGAEGVKLISEMKQLTSLDIGGNEIGDEGAKFISEMKQLTSLNI 273
Query: 196 WGSQVSNRGAAVLKMFPRLSFLN-----LAWTGVTKLPNISSLECLNLSFIQQVGAETDL 250
+Q+ + GA + +L+ L + G + + L LN+S Q+G E
Sbjct: 274 CENQIGDEGAKSISEMKQLTSLGAYNNEIGVEGTKLISEMKQLTSLNISK-NQIGDEGAK 332
Query: 251 VLS-------------------LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 291
++S + + + L+ LN+ + Q+ D +S K+L L
Sbjct: 333 LISEMKQLASLDIYYNEIGDEGVKLISEMKQLKSLNISKNQIGDEGAKLISEMKQLTSLD 392
Query: 292 LRNASLTDVSLHQLSSLSKLTNLSIRD 318
+ + D + +S + +LT+LSI +
Sbjct: 393 IHFNEIGDEGVKLISEMKQLTSLSIYN 419
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/293 (20%), Positives = 125/293 (42%), Gaps = 29/293 (9%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCV-KVTDAG 132
G N + E ++ + L SL++ + + + ++ M L LD+ C ++ D G
Sbjct: 58 GGNQIGDEGAKFISEMKQLTSLSIYN-NLIGAVGFEFISEMKQLTSLDI--CYNEIGDEG 114
Query: 133 MKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 192
+K + + L L + + +G+ +S ++ L+ LD+ + +S+ + +L
Sbjct: 115 VKSICEMKQLTSLSIYNNRIGDEGVKFISEMKQLTSLDINNNRIGVQGAKSICEMKQLTS 174
Query: 193 LDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSFIQQVGAE 247
L ++ +Q GA + +L+ L+++ G + + L LN+ + ++GAE
Sbjct: 175 LSIYNNQTGAVGAKFISEMKQLTSLDISVNEIGVEGAKFISEMKQLTSLNICY-NRIGAE 233
Query: 248 TDLVLS----LTALQ---------------NLNHLERLNLEQTQVSDATLFPLSTFKELI 288
++S LT+L + L LN+ + Q+ D +S K+L
Sbjct: 234 GVKLISEMKQLTSLDIGGNEIGDEGAKFISEMKQLTSLNICENQIGDEGAKSISEMKQLT 293
Query: 289 HLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 341
L N + +S + +LT+L+I + + G + L LD++
Sbjct: 294 SLGAYNNEIGVEGTKLISEMKQLTSLNISKNQIGDEGAKLISEMKQLASLDIY 346
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 87/186 (46%), Gaps = 19/186 (10%)
Query: 142 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVS 201
L+ L + E + A G +S ++ L+ LD+ + + + + + +L LD+ G+Q+
Sbjct: 4 LKSLDIGENQIGAVGAKFISEMKQLTSLDIIYNRIGAVGAKLISKMKQLTSLDIGGNQIG 63
Query: 202 NRGAAV---LKMFPRLSFLN-----LAWTGVTKLPNISSLE-CLNLSFIQQVGAETDLVL 252
+ GA +K LS N + + ++++ ++SL+ C N ++G E
Sbjct: 64 DEGAKFISEMKQLTSLSIYNNLIGAVGFEFISEMKQLTSLDICYN-----EIGDE----- 113
Query: 253 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 312
+ ++ + L L++ ++ D + +S K+L L + N + + + +LT
Sbjct: 114 GVKSICEMKQLTSLSIYNNRIGDEGVKFISEMKQLTSLDINNNRIGVQGAKSICEMKQLT 173
Query: 313 NLSIRD 318
+LSI +
Sbjct: 174 SLSIYN 179
>gi|148379742|ref|YP_001254283.1| hypothetical protein CBO1782 [Clostridium botulinum A str. ATCC
3502]
gi|153933744|ref|YP_001384039.1| hypothetical protein CLB_1717 [Clostridium botulinum A str. ATCC
19397]
gi|153934807|ref|YP_001387581.1| hypothetical protein CLC_1725 [Clostridium botulinum A str. Hall]
gi|148289226|emb|CAL83321.1| putative surface protein [Clostridium botulinum A str. ATCC 3502]
gi|152929788|gb|ABS35288.1| leucine rich repeat protein [Clostridium botulinum A str. ATCC
19397]
gi|152930721|gb|ABS36220.1| leucine rich repeat protein [Clostridium botulinum A str. Hall]
Length = 1359
Score = 53.5 bits (127), Expect = 2e-04, Method: Composition-based stats.
Identities = 67/275 (24%), Positives = 128/275 (46%), Gaps = 34/275 (12%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N +I+++G + ++ LG YL ++A+ V L +L L++LD++ C
Sbjct: 491 NLSSIKIQGNLLNEINNISILGKLEYL---SIANTNVVNIDVLRSLVN---LRKLDITGC 544
Query: 126 VKVTDAGMKHLLSISTL--EKLWLSETGLTADGIALLSS---------LQNLSVLDLGGL 174
K+ + HL + + E + + L + L+++ L +++ L+L G
Sbjct: 545 TKIDTQVLNHLSDVEIIGNEIVTFGDKVLEREIRELINNYSEPIYKRQLSSITKLELSGR 604
Query: 175 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLE 234
+ D L+ L+ + L YLDL +++SN + +K L L L + + I SL
Sbjct: 605 GIVD--LQGLESMENLTYLDLSNNEISNIDS--IKKLINLKKLVLHKNKIGSIKVIESLT 660
Query: 235 CLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 294
L +++ +L+ +TAL L+ L RL+L + + ++ L L +LSL
Sbjct: 661 KL-----EELDLSNNLIGDITALGGLSQLTRLDLSRNGI--VSISSLGGLINLQYLSLYE 713
Query: 295 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 329
++D + L KL S+++ L NSG+ +F
Sbjct: 714 NKISDGEEY----LKKL--YSLKELYLKNSGISNF 742
Score = 53.5 bits (127), Expect = 2e-04, Method: Composition-based stats.
Identities = 85/393 (21%), Positives = 151/393 (38%), Gaps = 114/393 (29%)
Query: 37 LPAHLADSLLRHLIRRRL------IFPSLLEVFK----HNA--------------EAIEL 72
+P D + L+R+ + ++PS LE K HNA E + L
Sbjct: 325 IPIEFKDKVFEDLVRKEINKPSGYVYPSDLENIKELDFHNAHIEKLNGIENMTALEKLNL 384
Query: 73 RGENSVDAEWMAYLGAFR-------------------YLRSLNVADCR------------ 101
G + D + YL R Y+R LN+
Sbjct: 385 SGTDIKDISLLKYLTNLREVNISNTSISDITALESSIYIRYLNLNKTEITTLEVIKKFEH 444
Query: 102 ----RVTSSALWALTGMTCLKELDLSRC----------------------VKVTDAGMKH 135
V+ + + + + L ELDLS C +K+ +
Sbjct: 445 IEKLYVSGTKISTIPNLNSLMELDLSNCNLTSNNFLSSNFSNLVYLNLSSIKIQGNLLNE 504
Query: 136 LLSISTLEKL-WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 194
+ +IS L KL +LS I +L SL NL LD+ G D QVL L ++
Sbjct: 505 INNISILGKLEYLSIANTNVVNIDVLRSLVNLRKLDITGCTKID-----TQVLNHLSDVE 559
Query: 195 LWGSQVSNRGAAVL-----------------KMFPRLSFLNLAWTGVTKLPNISSLECLN 237
+ G+++ G VL + ++ L L+ G+ L + S+E N
Sbjct: 560 IIGNEIVTFGDKVLEREIRELINNYSEPIYKRQLSSITKLELSGRGIVDLQGLESME--N 617
Query: 238 LSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 297
L+++ E + ++ +++ L +L++L L + ++ + + + +L L L N +
Sbjct: 618 LTYLDLSNNE---ISNIDSIKKLINLKKLVLHKNKIGSIKV--IESLTKLEELDLSNNLI 672
Query: 298 TDVSLHQLSSLSKLTNLSI-RDAVLTNSGLGSF 329
D++ L LS+LT L + R+ +++ S LG
Sbjct: 673 GDIT--ALGGLSQLTRLDLSRNGIVSISSLGGL 703
Score = 48.1 bits (113), Expect = 0.008, Method: Composition-based stats.
Identities = 55/168 (32%), Positives = 84/168 (50%), Gaps = 10/168 (5%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N +I LRG + E + L R L L++ R V +L+ + +T LK L L+
Sbjct: 833 NLHSINLRGHGKL--EGLQNLMPLRGLIKLDLQG-REVNYISLYYINYLTSLKYLYLNNM 889
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
D + L +++ L L LS TG++ I++LS L+NL+ L LGG +TD L L+
Sbjct: 890 NLTGD--LSFLENLTDLRVLDLSRTGIS--NISILSKLRNLNELYLGGNKITD--LSYLE 943
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 233
LT L LDL G+ A L+ L +L L T K+ + S++
Sbjct: 944 NLTNLIKLDLVGNNDITSIYA-LRNLINLRYLTLPITNPKKIQDYSAV 990
>gi|47566217|ref|ZP_00237245.1| Rab family protein [Bacillus cereus G9241]
gi|47556770|gb|EAL15101.1| Rab family protein [Bacillus cereus G9241]
Length = 755
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 131/280 (46%), Gaps = 26/280 (9%)
Query: 41 LADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRY---LRSLNV 97
+ D+ LR L+ +++ L E ++++ E + Y A +Y L+SL V
Sbjct: 186 ITDNKLRELVNKKVFNRKDLNTPITKEELLQVKDLFLNTNEILDY-SALKYMPNLKSLTV 244
Query: 98 ADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGI 157
A+ + S T + LK L L R + +D + L+ + LE L LS +T +
Sbjct: 245 ANAKIKDPSFF---TSLKQLKHLAL-RGNEFSD--VTPLVKMDHLESLDLSNNKIT--NV 296
Query: 158 ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 217
A L ++N+ L L G + D+ +L + +L+YL+L ++++N A L +++L
Sbjct: 297 APLIEMKNVKSLYLSGNQIEDVT--ALAKMEQLDYLNLANNKITN--VAPLSALKNVTYL 352
Query: 218 NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDAT 277
LA + + + SL +L + + V L+ ++ + LE L + + ++ D T
Sbjct: 353 TLAGNQIEDIKPLYSLPLTDLVLTR------NKVKDLSGIEQMKQLEELWIGKNEIKDVT 406
Query: 278 LFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 317
PLS +L L L N L D++ LSSL L L +
Sbjct: 407 --PLSKMTQLKELHLPNNELKDIT--PLSSLVNLQKLDLE 442
>gi|423632460|ref|ZP_17608206.1| hypothetical protein IK5_05309, partial [Bacillus cereus VD154]
gi|401261338|gb|EJR67500.1| hypothetical protein IK5_05309, partial [Bacillus cereus VD154]
Length = 814
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 113/233 (48%), Gaps = 34/233 (14%)
Query: 73 RGENSVDA-EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDA 131
+G N + E+M L LR NV D SA+ L G+ + V +T
Sbjct: 228 KGINEITGLEYMTNLEKLT-LRESNVKDI-----SAISKLRGL---------KYVDLTSN 272
Query: 132 GMKHLLSISTLE---KLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLT 188
++ + I LE KL+L + ++ + LS ++ + LDL G + D+ + L +L+
Sbjct: 273 SIESIHPIEQLENINKLFLRDNKIS--DLTPLSKMKKIKTLDLIGNNIKDI--QPLFILS 328
Query: 189 KLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL-NLSFIQQVGAE 247
++ L L +Q+S+ L RL+ + L W G K+ N+ S+ + NL ++ +E
Sbjct: 329 TMKQLYLANNQISD-----LTGIDRLNNVELLWIGNNKINNVESISKMSNLIELEISDSE 383
Query: 248 TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 300
+ ++ L L +L+ LNLE+ +SD + PLST L ++L ++DV
Sbjct: 384 ---IKDISPLSQLGNLQVLNLEENYISDIS--PLSTLTNLHEINLGANEISDV 431
>gi|253752270|ref|YP_003025411.1| lipoprotein [Streptococcus suis SC84]
gi|253754096|ref|YP_003027237.1| Streptococcal histidine triad-family protein [Streptococcus suis
P1/7]
gi|253756030|ref|YP_003029170.1| Streptococcal histidine triad-family protein [Streptococcus suis
BM407]
gi|386578400|ref|YP_006074806.1| Internalin protein [Streptococcus suis GZ1]
gi|386580470|ref|YP_006076875.1| putative lipoprotein [Streptococcus suis JS14]
gi|386582545|ref|YP_006078949.1| putative lipoprotein [Streptococcus suis SS12]
gi|386588670|ref|YP_006085071.1| putative lipoprotein [Streptococcus suis A7]
gi|251816559|emb|CAZ52196.1| putative lipoprotein [Streptococcus suis SC84]
gi|251818494|emb|CAZ56324.1| Streptococcal histidine triad-family protein [Streptococcus suis
BM407]
gi|251820342|emb|CAR46897.1| Streptococcal histidine triad-family protein [Streptococcus suis
P1/7]
gi|292558863|gb|ADE31864.1| Internalin protein [Streptococcus suis GZ1]
gi|319758662|gb|ADV70604.1| putative lipoprotein [Streptococcus suis JS14]
gi|353734691|gb|AER15701.1| putative lipoprotein [Streptococcus suis SS12]
gi|354985831|gb|AER44729.1| putative lipoprotein [Streptococcus suis A7]
Length = 858
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 13/159 (8%)
Query: 158 ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 217
A L + N+ VL +G P+ D+ + + KL+ LW + + LK P L +
Sbjct: 533 AGLDLMPNVEVLGIGFTPIDDV--KPILQFKKLK--QLWMTSTGVKDYQFLKEIPTLEGI 588
Query: 218 NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDAT 277
+L+ GV+ L + E NL + G + + +T L L LE LNL+ +V+D
Sbjct: 589 DLSQNGVSDLGFLE--EFPNLKVVSAAGND---IEDITILAKLKALESLNLDHNKVTD-- 641
Query: 278 LFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 316
L PL+ +L +SL N +TD+S L + KLT L I
Sbjct: 642 LSPLADLSQLTAVSLDNNRITDLSA--LQNKKKLTRLYI 678
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 102/234 (43%), Gaps = 24/234 (10%)
Query: 120 LDLSRCVKVTDAG------MKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 173
LDL V+V G +K +L L++LW++ TG+ L + L +DL
Sbjct: 535 LDLMPNVEVLGIGFTPIDDVKPILQFKKLKQLWMTSTGVK--DYQFLKEIPTLEGIDLSQ 592
Query: 174 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 233
V+DL L+ L+ + G+ + + +L L LNL VT L ++
Sbjct: 593 NGVSDLGF--LEEFPNLKVVSAAGNDIED--ITILAKLKALESLNLDHNKVTDLSPLA-- 646
Query: 234 ECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 293
+LS + V + + + L+ALQN L RL + Q D + +E L+
Sbjct: 647 ---DLSQLTAVSLDNNRITDLSALQNKKKLTRLYISQNPQLDISTLKTENLEE---LTAN 700
Query: 294 NASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLT 347
+++ D+ + + LT+L++++ +T L + L LD+ G + T
Sbjct: 701 ESNVKDLQF--VKNNPNLTSLTLKNNKITE--LQGIEENEKLVNLDVEGNQIKT 750
>gi|356551924|ref|XP_003544322.1| PREDICTED: F-box/LRR-repeat protein 3-like [Glycine max]
Length = 652
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 147/329 (44%), Gaps = 69/329 (20%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGM-TCLKELDLSR 124
N E + L V + L +F L+S+ + C T S L A+ + LKEL+LS+
Sbjct: 280 NLEKLILSSSVIVTTDLAKCLQSFSRLQSVKLDSCLG-TKSGLKAIGNLGASLKELNLSK 338
Query: 125 CVKVTDAGMKHLL--------------------SIST----------------------- 141
CV VTD + L+ SIS+
Sbjct: 339 CVGVTDENLPFLVQPHKDLEKLDITCCHTITHASISSLTNSCLRLTSLRMESCSLVSREG 398
Query: 142 ---------LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSL-QVLTKL 190
LE+L +++T + G+ +S LS L LG +TD L+ + +KL
Sbjct: 399 FLFIGRCQLLEELDVTDTEIDDQGLQSISRCTKLSSLKLGICSMITDNGLKHIASSCSKL 458
Query: 191 EYLDLW-GSQVSNRGAAVLKM-FPRLSFLNLAWTGVTKLPNISSL-ECLNLSFIQQVGAE 247
+ LDL+ S++++ G + + P L +N+A+ T ++ L +C L ++ G
Sbjct: 459 KQLDLYRSSRITDEGIVAIALGCPSLEVVNIAYNSNTTDTSLEFLSKCQKLRTLEIRGCP 518
Query: 248 TDLVLSLTALQNL----NHLERLNLEQT-QVSDATLFPLSTFKE-LIHLSLRNASLTDVS 301
+S L N+ +LE L++++ +++D + L+ + L H+ L S+TDV
Sbjct: 519 R---ISPKGLSNIVARCRYLEMLDIKKCHKINDTGMIQLAQHSQNLKHIKLSYCSVTDVG 575
Query: 302 LHQLSSLSKLTNLSIRDAV-LTNSGLGSF 329
L L+S+S L ++SI LT++GL +F
Sbjct: 576 LIALASISCLQHISIFHVEGLTSNGLAAF 604
>gi|228984504|ref|ZP_04144681.1| Internalin [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1]
gi|228775207|gb|EEM23596.1| Internalin [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1]
Length = 766
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 131/280 (46%), Gaps = 26/280 (9%)
Query: 41 LADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRY---LRSLNV 97
+ D+ LR L+ +++ L E ++++ E + Y A +Y L+SL V
Sbjct: 197 ITDNKLRELVNKKVFNRKDLNTPITKEELLQVKDLFLNTNEILDY-SALKYMPNLKSLTV 255
Query: 98 ADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGI 157
A+ + S T + LK L L R + +D + L+ + LE L LS +T +
Sbjct: 256 ANAKIKDPSFF---TSLKQLKHLAL-RGNEFSD--VTPLVKMDHLESLDLSNNKIT--NV 307
Query: 158 ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 217
A L ++N+ L L G + D+ +L + +L+YL+L ++++N A L +++L
Sbjct: 308 APLIEMKNVKSLYLSGNQIEDVT--ALAKMEQLDYLNLANNKITN--VAPLSALKNVTYL 363
Query: 218 NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDAT 277
LA + + + SL +L + + V L+ ++ + LE L + + ++ D T
Sbjct: 364 TLAGNQIEDIKPLYSLPLTDLVLTR------NKVKDLSGIEQMKQLEELWIGKNEIKDVT 417
Query: 278 LFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 317
PLS +L L L N L D++ LSSL L L +
Sbjct: 418 --PLSKMTQLKELHLPNNELKDIT--PLSSLVNLQKLDLE 453
>gi|168185063|ref|ZP_02619727.1| ABC transporter permease protein [Clostridium botulinum Bf]
gi|182671889|gb|EDT83850.1| ABC transporter permease protein [Clostridium botulinum Bf]
Length = 1355
Score = 53.5 bits (127), Expect = 2e-04, Method: Composition-based stats.
Identities = 60/256 (23%), Positives = 124/256 (48%), Gaps = 30/256 (11%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
++++ + L L++A+ V L L L++LD++ C ++ + H+ I
Sbjct: 504 ISFVSSLEKLEYLSIANTDVVNIDVLKNLIN---LRKLDITGCAQINTQVLNHVEIIGN- 559
Query: 143 EKLWLSETGLTADGIALLSS---------LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
E + + L + L+++ L +++ L+L G + DL + L+ + L YL
Sbjct: 560 EIVNFGDKVLEREIRELINNYSEPIYKRQLSSITKLELSGRGIVDL--QGLESMENLTYL 617
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLS 253
DL +++SN + +L+ L K+ +I S+E +L +++++ +L+
Sbjct: 618 DLSNNEISN-----IDSIKKLANLKKLVLHKNKIGSIKSIE--SLKYLEELDLSNNLIGD 670
Query: 254 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 313
+TAL L+ L RL+L + + ++ L + L +LSL +++ + L KL
Sbjct: 671 ITALGGLSQLTRLDLSRNGI--VSINSLGSLINLQYLSLYENKISEGEEY----LKKL-- 722
Query: 314 LSIRDAVLTNSGLGSF 329
S+R+ L NSG+ +F
Sbjct: 723 YSLRELYLKNSGVSNF 738
Score = 44.7 bits (104), Expect = 0.084, Method: Composition-based stats.
Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 16/171 (9%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N +I LRG + E + L R L L++ R + ++L+ + +T L+ L L+
Sbjct: 829 NLHSINLRGHGKL--EGLENLIPIRGLIKLDLQG-REINYTSLYYIKYLTSLRYLYLNNM 885
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
D + L +++ L L LS TG++ I++L L+NLS L LGG + D L SL+
Sbjct: 886 NLTGD--LSFLENLTDLRILDLSRTGIS--NISILDKLRNLSELYLGGNNIID--LSSLE 939
Query: 186 VLTKLEYLDLWGSQVSNRGAA---VLKMFPRLSFLNLAWTGVTKLPNISSL 233
LT L LDL V N L+ L +L L T K+ + S++
Sbjct: 940 NLTNLVKLDL----VENNDITSIYALRNLINLRYLTLPITNPKKIQDYSAV 986
>gi|146319231|ref|YP_001198943.1| internalin A precursor [Streptococcus suis 05ZYH33]
gi|145690037|gb|ABP90543.1| putative internalin A precursor [Streptococcus suis 05ZYH33]
Length = 813
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 13/159 (8%)
Query: 158 ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 217
A L + N+ VL +G P+ D+ + + KL+ LW + + LK P L +
Sbjct: 488 AGLDLMPNVEVLGIGFTPIDDV--KPILQFKKLK--QLWMTSTGVKDYQFLKEIPTLEGI 543
Query: 218 NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDAT 277
+L+ GV+ L + E NL + G + + +T L L LE LNL+ +V+D
Sbjct: 544 DLSQNGVSDLGFLE--EFPNLKVVSAAGND---IEDITILAKLKALESLNLDHNKVTD-- 596
Query: 278 LFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 316
L PL+ +L +SL N +TD+S L + KLT L I
Sbjct: 597 LSPLADLSQLTAVSLDNNRITDLSA--LQNKKKLTRLYI 633
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 102/234 (43%), Gaps = 24/234 (10%)
Query: 120 LDLSRCVKVTDAG------MKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 173
LDL V+V G +K +L L++LW++ TG+ L + L +DL
Sbjct: 490 LDLMPNVEVLGIGFTPIDDVKPILQFKKLKQLWMTSTGVK--DYQFLKEIPTLEGIDLSQ 547
Query: 174 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 233
V+DL L+ L+ + G+ + + +L L LNL VT L ++
Sbjct: 548 NGVSDLGF--LEEFPNLKVVSAAGNDIED--ITILAKLKALESLNLDHNKVTDLSPLA-- 601
Query: 234 ECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 293
+LS + V + + + L+ALQN L RL + Q D + +E L+
Sbjct: 602 ---DLSQLTAVSLDNNRITDLSALQNKKKLTRLYISQNPQLDISTLKTENLEE---LTAN 655
Query: 294 NASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLT 347
+++ D+ + + LT+L++++ +T L + L LD+ G + T
Sbjct: 656 ESNVKDLQF--VKNNPNLTSLTLKNNKITE--LQGIEENEKLVNLDVEGNQIKT 705
>gi|334117579|ref|ZP_08491670.1| Adenylate cyclase [Microcoleus vaginatus FGP-2]
gi|333460688|gb|EGK89296.1| Adenylate cyclase [Microcoleus vaginatus FGP-2]
Length = 516
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 100/198 (50%), Gaps = 22/198 (11%)
Query: 139 ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
+S+L +L+LS G I L+SL NL+VLDLG + D ++ L LT L L+L+G+
Sbjct: 86 LSSLTELFLS--GNVIGDITPLASLTNLTVLDLGFNALGD--IKPLASLTNLTRLNLFGN 141
Query: 199 QVSN-RGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTAL 257
Q+ + + A L L+ N + L ++++L L LS QVG + L
Sbjct: 142 QIGDIKPLASLTKLTELTLNNNKIGDIKPLASLTNLTDLVLSS-NQVG-------DIKPL 193
Query: 258 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 317
+L +L RL+L+ + D + PL++ L L L + D+ L+ LTNLS
Sbjct: 194 ASLTNLTRLDLDGNVIGD--IKPLASLTNLTRLDLDGNVIGDI-----KPLASLTNLSSL 246
Query: 318 DAVLTNSGLGSFKPPRSL 335
D L ++ +G KP SL
Sbjct: 247 D--LDDNQIGDIKPLASL 262
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 127/265 (47%), Gaps = 24/265 (9%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
+D + + L +L D RR+ + L +T L +L L ++ D +K L
Sbjct: 248 LDDNQIGDIKPLASLTNLMGLDLRRIVIGDIKPLASLTNLTDLSLDDN-QIGD--IKPLA 304
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
S++ L +L LS + I L+SL NLS LDL G + D ++ L LT L LDL
Sbjct: 305 SLTNLTRLVLSSNQIR--DIKPLASLTNLSSLDLSGNVIGD--IKPLASLTNLSSLDLNN 360
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTAL 257
+++ + L +L+ L L+ + + ++SL NLS + G +++ + L
Sbjct: 361 NKIGD--IKPLASLTKLTELTLSGNVIGDIKPLASLT--NLSSLVLFG---NVIGDIKPL 413
Query: 258 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 317
+L +L L L+ + D + L++ L L L + + D+ L+ LTNLS
Sbjct: 414 ASLTNLSSLVLDGNVIGD--IKALASLTNLAGLFLSSNVIGDI-----KPLASLTNLSSL 466
Query: 318 DAVLTNSGLGSFKPPRSL-KLLDLH 341
D L+++ +G KP SL L++LH
Sbjct: 467 D--LSDNHIGDIKPLASLTNLIELH 489
>gi|328708332|ref|XP_003243660.1| PREDICTED: leucine-rich repeat-containing protein 4B-like
[Acyrthosiphon pisum]
Length = 597
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 105/253 (41%), Gaps = 29/253 (11%)
Query: 139 ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
++ LEKL LS +T + S+L L +LDL ++ + S LTKLE L L +
Sbjct: 245 LTRLEKLTLSNNNITEVKNRVFSNLPKLQILDLQNNKISGIERESFTYLTKLETLILSNN 304
Query: 199 QVSNRGAAVLKMFPRLSFLNLAWT---GVTKLPNISSLECLNLS--FIQQVGAETDLVLS 253
+S F +L L+L++ + L +++ LE LNLS I +V
Sbjct: 305 NISEVQNGAFANFSKLQSLDLSYNFIMDIESLSHLTELETLNLSNNNISEVKN------- 357
Query: 254 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 313
A NL L+ L L ++ + + L L L ++ + L L KL
Sbjct: 358 -GAFTNLWKLQALFLSGNKIDNIETGAFNNLTSLRALFLDYNNIHKIDLDMFKGLKKLNR 416
Query: 314 LSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFC----KMHPRIEVWHELSV 369
L + ++ N G+F SL +L L L + IL F K +P+ +V
Sbjct: 417 LFLDHNMIRNIPPGTFDSLASLSVLQLDNNPLTCDCNILLFVNVLKKNYPQRDV------ 470
Query: 370 ICPSDQIGSNGPS 382
+G N PS
Sbjct: 471 ------LGDNDPS 477
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 99/218 (45%), Gaps = 13/218 (5%)
Query: 133 MKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 192
++ L +++ L L+L + I L+ L L LDL + D+ SL LT+LE
Sbjct: 123 IESLANLTQLAILYLYRNNIM--DIKSLAHLTKLETLDLSYNEIMDI--ESLAHLTELET 178
Query: 193 LDLWGSQVS--NRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDL 250
LDL + +S GA F LS L + K+ NI + NL+ ++ + +
Sbjct: 179 LDLSNNNISELKHGA-----FANLSKLQSLFLYTNKIENIETGVFNNLTSLESLSLHDNS 233
Query: 251 VLSLTA--LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 308
+ +L + + L LE+L L +++ S +L L L+N ++ + + L
Sbjct: 234 IHNLDSEIFKGLTRLEKLTLSNNNITEVKNRVFSNLPKLQILDLQNNKISGIERESFTYL 293
Query: 309 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLL 346
+KL L + + ++ G+F L+ LDL +++
Sbjct: 294 TKLETLILSNNNISEVQNGAFANFSKLQSLDLSYNFIM 331
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 114/274 (41%), Gaps = 26/274 (9%)
Query: 79 DAEWMAYLG--AFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHL 136
D E +A L A YL N+ D + +L +T L+ LDLS + + HL
Sbjct: 122 DIESLANLTQLAILYLYRNNIMDIK--------SLAHLTKLETLDLSYNEIMDIESLAHL 173
Query: 137 LSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLW 196
+ TL+ LS ++ ++L L L L + ++ LT LE L L
Sbjct: 174 TELETLD---LSNNNISELKHGAFANLSKLQSLFLYTNKIENIETGVFNNLTSLESLSLH 230
Query: 197 GSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLP-----NISSLECLNLSFIQQVGAETDLV 251
+ + N + + K RL L L+ +T++ N+ L+ L+L + G E +
Sbjct: 231 DNSIHNLDSEIFKGLTRLEKLTLSNNNITEVKNRVFSNLPKLQILDLQNNKISGIERESF 290
Query: 252 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
LT LE L L +S+ + F +L L L + D+ LS L++L
Sbjct: 291 TYLTK------LETLILSNNNISEVQNGAFANFSKLQSLDLSYNFIMDI--ESLSHLTEL 342
Query: 312 TNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 345
L++ + ++ G+F L+ L L G +
Sbjct: 343 ETLNLSNNNISEVKNGAFTNLWKLQALFLSGNKI 376
>gi|157865947|ref|XP_001681680.1| putative surface antigen protein [Leishmania major strain Friedlin]
gi|68124978|emb|CAJ02759.1| putative surface antigen protein [Leishmania major strain Friedlin]
Length = 610
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 131/309 (42%), Gaps = 20/309 (6%)
Query: 47 RHLIRRRLIF---PSLLEVFKHNAEAIE------LRGENSVDAEWMAYLGAFRYLRSLNV 97
RH++ R L F P L + +E L G N V A + L SL++
Sbjct: 105 RHVMIRDLGFWNMPLLSGTLPDSWSKLEKLTFLTLLG-NKVSGTLPASWHSMTSLESLSI 163
Query: 98 ADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGI 157
C ++ + + M L L+L KV+ + S+ +L L L +T ++
Sbjct: 164 EKCESISGALPPQWSSMKSLSFLNLDG-AKVSGSLPPQWSSMKSLRTLDLGDTQVSGSLP 222
Query: 158 ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 217
SS+ LS L+L G V+ + +T L LD+ G+QVS LS L
Sbjct: 223 PQWSSMTLLSFLNLDGAKVSGALPPQWSSMTLLAVLDVQGTQVSGTLPPQWSSMKSLSVL 282
Query: 218 NLAWTGVTK--LPNISSLECLNLSFIQ--QVGAETDLVLSLTALQNLNHLERLNLEQTQV 273
NL T ++ P SS+ L + +Q QV SL + L L+++ TQV
Sbjct: 283 NLRGTSISGSVPPQWSSMTSLAVLDVQGTQVSGTLPPQWSL-----MTSLTSLDVQGTQV 337
Query: 274 SDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPR 333
S + S+ L L+LR ++ Q SS++ LT+L ++ ++ + +
Sbjct: 338 SGSVPPQWSSMTSLTALNLRGTQVSGTLPPQWSSMTSLTSLDVQGTQVSGTLPPQWSSMT 397
Query: 334 SLKLLDLHG 342
SL LD+ G
Sbjct: 398 SLAALDVQG 406
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 114/276 (41%), Gaps = 47/276 (17%)
Query: 114 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 173
MT L LD+ + +V+ S+ +L L L T ++ SS+ +L+VLD+ G
Sbjct: 252 MTLLAVLDV-QGTQVSGTLPPQWSSMKSLSVLNLRGTSISGSVPPQWSSMTSLAVLDVQG 310
Query: 174 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-KLP---- 228
V+ + ++T L LD+ G+QVS L+ LNL T V+ LP
Sbjct: 311 TQVSGTLPPQWSLMTSLTSLDVQGTQVSGSVPPQWSSMTSLTALNLRGTQVSGTLPPQWS 370
Query: 229 NISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFP-------- 280
+++SL L++ Q G S+T+ L L+++ TQVS TL P
Sbjct: 371 SMTSLTSLDVQGTQVSGTLPPQWSSMTS------LAALDVQGTQVS-GTLPPQWSSMRRL 423
Query: 281 -----------------LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
S + L+ L L ++ ++ Q S +SK +L ++D L+
Sbjct: 424 THLLLTDTLLSGTLPAEWSALQSLVTLQLSSSKVSGTLPPQWSGMSKAQSLQLQDCDLSG 483
Query: 324 SGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHP 359
S S+ L + L G +FC P
Sbjct: 484 SLPSSWSAIPMLAFVSLKGN---------KFCGCVP 510
>gi|440794154|gb|ELR15325.1| leucine rich repeat domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 598
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 145/349 (41%), Gaps = 53/349 (15%)
Query: 1 MERERESE-LVRLCIEAA-------CQSGES--VQKWRRQRRSLER--LPAHLADSLLRH 48
M+ RE+ L +LCI++ CQ E +++ R + + LP HLA +L
Sbjct: 1 MKLPREAPTLTKLCIKSIALNINLWCQGVEEFHLERCRYLLTAFDEYTLPDHLALQILNA 60
Query: 49 L-IRRRLIFPSLLEVFKHNAEAIELR--GENSVDAEWMAYLGAFRYLRSLNVADCRRVTS 105
L +R++L + + + ++L G D + +R LN+A C ++T+
Sbjct: 61 LALRKKLTLSNFVMFLNSSLVQLDLHECGGYITDHFIRQVAKRAQRIRRLNLATCFKITN 120
Query: 106 SALWALTG-MTCLKELDLSRCVKVTDAGMKHLLS-------------------------- 138
A+ L + CL+ +DL+ C K+ D+ ++ +
Sbjct: 121 PAVLDLARRLRCLQSVDLTGCNKLQDSALEAIAENTGITSLRLGAVTKLGDSALLRVAAR 180
Query: 139 ISTLEKLWLSETGLTADGIA--LLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDL 195
++ LE+L L+ D A L L L LGG V+D +++ LE+LD+
Sbjct: 181 LAGLEELDLTHCPRITDRSATQLFDRCPQLKTLSLGGCWEVSDTSFSRIKLQVNLEHLDV 240
Query: 196 WGSQVSNRGAAVLK-MFPRLSFLNLAWTG-------VTKLPNISSLECLNLSFIQQVGAE 247
S + N G +K +L +LNL + P LE LNL+ + A
Sbjct: 241 AVSFIGNAGLQAIKGTCKKLKYLNLEGCANITDEAFLDDTPFGEHLETLNLAGCSNITAR 300
Query: 248 TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 296
+ L L + L L+L QT A +F + + ++ L++ + +
Sbjct: 301 GIIGLFLDQISAPESLRTLHLPQTLTDGAFIFITNQLRHVVSLNIESCT 349
>gi|423382828|ref|ZP_17360084.1| hypothetical protein ICE_00574 [Bacillus cereus BAG1X1-2]
gi|423530712|ref|ZP_17507157.1| hypothetical protein IGE_04264 [Bacillus cereus HuB1-1]
gi|401643688|gb|EJS61382.1| hypothetical protein ICE_00574 [Bacillus cereus BAG1X1-2]
gi|402446046|gb|EJV77910.1| hypothetical protein IGE_04264 [Bacillus cereus HuB1-1]
Length = 760
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 133/281 (47%), Gaps = 37/281 (13%)
Query: 41 LADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRY---LRSLNV 97
+ D+ LR L+ +++ L E ++++ E + Y A +Y L+SL V
Sbjct: 191 ITDNKLRELVNKKVFNRKDLNTPITKEELLQVKDLFLNTNEILDY-SALKYMPNLKSLTV 249
Query: 98 ADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGI 157
A+ + + + +A LK+L+ A + L+ + LE L LS +T +
Sbjct: 250 ANAK-IKDPSFFA-----NLKQLNHLALRGNEFADVTPLVKMDNLESLDLSNNKIT--NV 301
Query: 158 ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 217
L+ ++N+ L L G + D+ +L + +L+YL+L ++++N A L +++L
Sbjct: 302 TPLTEMKNVKSLYLSGNQIEDVT--ALAKMEQLDYLNLANNKITN--VAPLSALKNVTYL 357
Query: 218 NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLS------LTALQNLNHLERLNLEQT 271
LA ++ +I +L L L TDLVL+ L+ ++ + LE L + +
Sbjct: 358 TLAGN---QIEDIKALYSLPL---------TDLVLTRNKVKDLSGIEQMKQLEELWIGKN 405
Query: 272 QVSDATLFPLSTFKELIHLSLRNASLTDVS-LHQLSSLSKL 311
++ D T PLS +L L L N L D++ L L +L KL
Sbjct: 406 EIKDVT--PLSKMTQLKQLHLPNNELKDITPLSSLVNLQKL 444
>gi|15811373|gb|AAL08943.1|AF346501_1 G protein coupled receptor affecting testicular descent [Mus
musculus]
Length = 737
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 105/240 (43%), Gaps = 18/240 (7%)
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
+T + L + L+ L+LS +T+ + L L+ L L P+T + +S L
Sbjct: 156 ITHISRRAFLGLHNLQILYLSHNCITSLRPGIFKDLHQLAWLILDDNPITRISQKSFMGL 215
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFI----QQ 243
L +L + G+++ + P+L++++LA G+ + N + L C +L+ + Q
Sbjct: 216 NSLFFLPMVGNRLEALPETLCAQMPQLNWVDLANNGIKYITNSTFLTCDSLTVLFLPRNQ 275
Query: 244 VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLH 303
+G + S +L +L L+L ++ + S L L+L + L V +
Sbjct: 276 IGFVPEKTFS-----SLKNLGELDLSSNMITKLPVHLFSDLHLLQKLNLSSNPLLYVHKN 330
Query: 304 QLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEV 363
Q SL +L +L + + N G F+P ++L + L ++C P + +
Sbjct: 331 QFGSLKQLQSLDLERIEIPNISTGMFQPMKNLSHIYL---------KTFRYCSYVPHVRI 381
>gi|403062018|ref|YP_006650234.1| lipoprotein [Streptococcus suis S735]
gi|402809344|gb|AFR00836.1| putative lipoprotein [Streptococcus suis S735]
Length = 858
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 13/159 (8%)
Query: 158 ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 217
A L + N+ VL +G P+ D+ + + KL+ LW + + LK P L +
Sbjct: 533 AGLDLMPNVEVLGIGFTPIDDV--KPILQFKKLK--QLWMTSTGVKDYQFLKEIPTLEGI 588
Query: 218 NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDAT 277
+L+ GV+ L + E NL + G + + +T L L LE LNL+ +V+D
Sbjct: 589 DLSQNGVSDLGFLE--EFPNLKVVSAAGND---IEDITILAKLKALESLNLDHNKVTD-- 641
Query: 278 LFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 316
L PL+ +L +SL N +TD+S L + KLT L I
Sbjct: 642 LSPLADLSQLTAVSLDNNRITDLSA--LQNKKKLTRLYI 678
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 102/234 (43%), Gaps = 24/234 (10%)
Query: 120 LDLSRCVKVTDAG------MKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 173
LDL V+V G +K +L L++LW++ TG+ L + L +DL
Sbjct: 535 LDLMPNVEVLGIGFTPIDDVKPILQFKKLKQLWMTSTGVK--DYQFLKEIPTLEGIDLSQ 592
Query: 174 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 233
V+DL L+ L+ + G+ + + +L L LNL VT L ++
Sbjct: 593 NGVSDLGF--LEEFPNLKVVSAAGNDIED--ITILAKLKALESLNLDHNKVTDLSPLA-- 646
Query: 234 ECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 293
+LS + V + + + L+ALQN L RL + Q D + +E L+
Sbjct: 647 ---DLSQLTAVSLDNNRITDLSALQNKKKLTRLYISQNPQLDISTLKTENLEE---LTAN 700
Query: 294 NASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLT 347
+++ D+ + + LT+L++++ +T L + L LD+ G + T
Sbjct: 701 ESNVKDLQF--VKNNPNLTSLTLKNNKITE--LQGIEENEKLVNLDVEGNQIKT 750
>gi|290983152|ref|XP_002674293.1| predicted protein [Naegleria gruberi]
gi|284087882|gb|EFC41549.1| predicted protein [Naegleria gruberi]
Length = 338
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 96/211 (45%), Gaps = 12/211 (5%)
Query: 111 LTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLD 170
+T M L LD+S ++ D G+K + + L L + G+ +G+ + ++ L+ L
Sbjct: 130 ITEMKQLTSLDISNN-RIGDEGVKFISEMKQLISLGIYNNGIGDEGVKSIIEMKRLTSLG 188
Query: 171 LGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAV---LKMFPRLSFLN--LAWTGVT 225
+GG + D +S+ + +L LD+ +Q + G +K L+ N + G
Sbjct: 189 IGGNQIGDEGAKSISEMKQLTSLDINNNQTGDEGVKFICEMKQLTSLTIYNNRIGDEGAK 248
Query: 226 KLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFK 285
+ + L LN+S ++G E + +S L L L++ ++ D + K
Sbjct: 249 SISEMKQLTSLNISE-NRIGDEGAIFIS-----ELKQLTSLDICYNRIGDKEAKFICEMK 302
Query: 286 ELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 316
+L L + + D + +S +++LT+L I
Sbjct: 303 QLKSLDIGGNQIGDEGVKFISEMTRLTSLDI 333
>gi|290977818|ref|XP_002671634.1| predicted protein [Naegleria gruberi]
gi|284085204|gb|EFC38890.1| predicted protein [Naegleria gruberi]
Length = 359
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 74/146 (50%), Gaps = 5/146 (3%)
Query: 80 AEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSI 139
AE+++ L L V + ++ S ++GM LK+L S K+ + G+KH+ +
Sbjct: 177 AEYISNLDELTVL----VINNNQIGSKGAKFISGMKQLKQLSDSY-TKLGETGVKHICEM 231
Query: 140 STLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQ 199
+ L L++ T + G + L+ L +LD+ + + ++ L L +L +L++ GS
Sbjct: 232 TQLTHLYICNTKIGNSGAKNIIKLKQLQLLDISYNGINNEIVELLSQLDQLTFLNISGSA 291
Query: 200 VSNRGAAVLKMFPRLSFLNLAWTGVT 225
+ N + +L++L++++ G+
Sbjct: 292 IDNLALTFINKMNQLTYLDVSYNGIN 317
Score = 44.7 bits (104), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 72/138 (52%), Gaps = 3/138 (2%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + ++ ++ + L+ L+ + ++ + + + MT L L + K+ ++G K+
Sbjct: 194 NQIGSKGAKFISGMKQLKQLSDS-YTKLGETGVKHICEMTQLTHLYICN-TKIGNSGAKN 251
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
++ + L+ L +S G+ + + LLS L L+ L++ G + +L L + + +L YLD+
Sbjct: 252 IIKLKQLQLLDISYNGINNEIVELLSQLDQLTFLNISGSAIDNLALTFINKMNQLTYLDV 311
Query: 196 WGSQVSNRGAAVL-KMFP 212
+ +++ G + KM P
Sbjct: 312 SYNGINDEGLIYISKMKP 329
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 21/214 (9%)
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLW- 196
S+ L K++LS + + G L+ L NL+ D+ + SL L+KL L
Sbjct: 60 SMKKLTKVYLSSETIDSKGAKYLAGLNNLT--DIHVDSYNNFGNESLYYLSKLSQLTKLS 117
Query: 197 -GSQ--VSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNL--SFIQQVGA 246
GS+ ++ G L +L++L + T + + L+ LN+ + I A
Sbjct: 118 IGSKNNITYEGVEYLSQLSKLTYLCITGNETTDEQVKLISSFKQLKTLNIYSNLISDKSA 177
Query: 247 ETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLS 306
E + NL+ L L + Q+ +S K+L LS L + + +
Sbjct: 178 E--------YISNLDELTVLVINNNQIGSKGAKFISGMKQLKQLSDSYTKLGETGVKHIC 229
Query: 307 SLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
+++LT+L I + + NSG + + L+LLD+
Sbjct: 230 EMTQLTHLYICNTKIGNSGAKNIIKLKQLQLLDI 263
>gi|423646615|ref|ZP_17622185.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus VD169]
gi|401287124|gb|EJR92929.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus VD169]
Length = 984
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 127/269 (47%), Gaps = 37/269 (13%)
Query: 61 EVFKHNAEAIELRGENS---VDAEWMAYLGAFRYLRS-----LNVADCRRVTSSALWALT 112
E K N E E + EN +D + Y+ + R + D ++ + ++++
Sbjct: 171 EAQKENKE--EKQDENGNVILDKQLQKYINKYNLDRDNVDAPITKKDLLKIKTLSIYSGK 228
Query: 113 GMTCLKELD-LSRCVKVT--DAGMKHLLSISTLEKL-WLSETGLTADGIALLSSLQNLSV 168
G+ + L+ ++ K+T ++ +K + +IS L L ++ T + + I + L+N+++
Sbjct: 229 GINEITGLEYMTNLEKLTLRESNVKDISAISKLRGLKYVDLTSNSIESIHPIEQLENINM 288
Query: 169 LDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV-----------------SNRGAAVLKMF 211
L L ++DL L + K++ LDL G+ + +N + L
Sbjct: 289 LFLRDNKISDLT--PLSKMKKIKTLDLIGNNIKDIQPLFTLSTMKQLYLANNQISDLTGI 346
Query: 212 PRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 271
RL+ + L W G K+ N+ S+ + S++ ++ + +++L L +L+ LNLE+
Sbjct: 347 DRLNNVELLWIGNNKINNVESISKM--SYLIELEISDSEIKDISSLSQLGNLQVLNLEEN 404
Query: 272 QVSDATLFPLSTFKELIHLSLRNASLTDV 300
+SD + PLST L ++L ++DV
Sbjct: 405 YISDVS--PLSTLTNLHEINLGANEISDV 431
>gi|392969291|ref|ZP_10334707.1| Leucine-rich repeat, ribonuclease inhibitor subtype [Fibrisoma limi
BUZ 3]
gi|387843653|emb|CCH56761.1| Leucine-rich repeat, ribonuclease inhibitor subtype [Fibrisoma limi
BUZ 3]
Length = 463
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 61/111 (54%), Gaps = 6/111 (5%)
Query: 246 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 305
A TD L+ A L +L++L+LEQT+V+DA L L L +L+L ++TD L +L
Sbjct: 345 AVTDATLAQVA--KLKNLQKLHLEQTKVTDAGLKQLKGLPNLEYLNLYGTAITDAGLKEL 402
Query: 306 SSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 356
+ L L + + +T + L K +SL ++ GG ++E A+ +F K
Sbjct: 403 AELKSLKTVYLWQTNVTETALAELK--KSLPNVEFVGG--ISEQAVAEFTK 449
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
VTDA + + + L+KL L +T +T G+ L L NL L+L G +TD L+ L L
Sbjct: 346 VTDATLAQVAKLKNLQKLHLEQTKVTDAGLKQLKGLPNLEYLNLYGTAITDAGLKELAEL 405
Query: 188 TKLEYLDLWGSQVSNRGAAVLKM-FPRLSFLN 218
L+ + LW + V+ A LK P + F+
Sbjct: 406 KSLKTVYLWQTNVTETALAELKKSLPNVEFVG 437
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 5/99 (5%)
Query: 266 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 325
L L +T V+DATL ++ K L L L +TD L QL L L L++ +T++G
Sbjct: 339 LKLGETAVTDATLAQVAKLKNLQKLHLEQTKVTDAGLKQLKGLPNLEYLNLYGTAITDAG 398
Query: 326 LGSFKPPRSLKLLDLHGGWL--LTEDAILQFCKMHPRIE 362
L +SLK + L W +TE A+ + K P +E
Sbjct: 399 LKELAELKSLKTVYL---WQTNVTETALAELKKSLPNVE 434
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Query: 145 LWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG 204
L L ET +T +A ++ L+NL L L VTD L+ L+ L LEYL+L+G+ +++ G
Sbjct: 339 LKLGETAVTDATLAQVAKLKNLQKLHLEQTKVTDAGLKQLKGLPNLEYLNLYGTAITDAG 398
Query: 205 AAVLKMFPRLSFLNLAWTGVTK---------LPNI 230
L L + L T VT+ LPN+
Sbjct: 399 LKELAELKSLKTVYLWQTNVTETALAELKKSLPNV 433
>gi|228951810|ref|ZP_04113908.1| Internalin [Bacillus thuringiensis serovar kurstaki str. T03a001]
gi|423423509|ref|ZP_17400540.1| hypothetical protein IE5_01198 [Bacillus cereus BAG3X2-2]
gi|423504975|ref|ZP_17481566.1| hypothetical protein IG1_02540 [Bacillus cereus HD73]
gi|449088218|ref|YP_007420659.1| Internalin [Bacillus thuringiensis serovar kurstaki str. HD73]
gi|228807733|gb|EEM54254.1| Internalin [Bacillus thuringiensis serovar kurstaki str. T03a001]
gi|401115199|gb|EJQ23052.1| hypothetical protein IE5_01198 [Bacillus cereus BAG3X2-2]
gi|402455497|gb|EJV87280.1| hypothetical protein IG1_02540 [Bacillus cereus HD73]
gi|449021975|gb|AGE77138.1| Internalin [Bacillus thuringiensis serovar kurstaki str. HD73]
Length = 755
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 118/239 (49%), Gaps = 37/239 (15%)
Query: 88 AFRY---LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEK 144
A +Y L+SL VA+ + + + +A + L L L R + +D + L+ + LE
Sbjct: 232 ALKYMPNLKSLTVANAK-IKDPSFFA--NLKQLSHLAL-RGNEFSD--VTPLVKMDNLES 285
Query: 145 LWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG 204
L LS +T +A L+ ++N+ L L G + D+ +L + +L+YL+L ++++N
Sbjct: 286 LDLSNNKIT--NVAPLTEMKNVKSLFLSGNQIEDVT--ALAKMEQLDYLNLANNKITN-- 339
Query: 205 AAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLS------LTALQ 258
A L +++L LA ++ +I +L L L TDLVL+ L+ ++
Sbjct: 340 VAPLSALKNVTYLTLAGN---QIEDIKALYSLPL---------TDLVLTRNKVKDLSGIE 387
Query: 259 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 317
+ LE L + + ++ D T PLS +L L L N L D++ LSSL L L +
Sbjct: 388 QMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT--PLSSLVNLQKLDLE 442
>gi|229177836|ref|ZP_04305209.1| Internalin [Bacillus cereus 172560W]
gi|228605627|gb|EEK63075.1| Internalin [Bacillus cereus 172560W]
Length = 766
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 118/239 (49%), Gaps = 37/239 (15%)
Query: 88 AFRY---LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEK 144
A +Y L+SL VA+ + + + +A + L L L R + +D + L+ + LE
Sbjct: 243 ALKYMPNLKSLTVANAK-IKDPSFFA--NLKQLSHLAL-RGNEFSD--VTPLVKMDNLES 296
Query: 145 LWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG 204
L LS +T +A L+ ++N+ L L G + D+ +L + +L+YL+L ++++N
Sbjct: 297 LDLSNNKIT--NVAPLTEMKNVKSLFLSGNQIEDVT--ALAKMEQLDYLNLANNKITN-- 350
Query: 205 AAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLS------LTALQ 258
A L +++L LA ++ +I +L L L TDLVL+ L+ ++
Sbjct: 351 VAPLSALKNVTYLTLAGN---QIEDIKALYSLPL---------TDLVLTRNKVKDLSGIE 398
Query: 259 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 317
+ LE L + + ++ D T PLS +L L L N L D++ LSSL L L +
Sbjct: 399 QMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT--PLSSLVNLQKLDLE 453
>gi|328710414|ref|XP_001947265.2| PREDICTED: chaoptin-like [Acyrthosiphon pisum]
Length = 1549
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 110/243 (45%), Gaps = 19/243 (7%)
Query: 110 ALTGMTCLKELDL-SRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSV 168
+L LK LDL + +K +GM + S+ L++L+LSE L L NL++
Sbjct: 697 SLAANPNLKILDLRNNEIKQMKSGM--VSSMPYLKELYLSENNLNILNEGAFQQLPNLTI 754
Query: 169 LDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLP 228
L++ G + L +Q L L + + +++ + +A + P L + L + ++
Sbjct: 755 LEMEGNNLNTLPSYGIQSLPNLMVVKMARNKLVSLPSAAMVNLPMLQIVELQQNQLNEIA 814
Query: 229 N-----ISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLST 283
+ I +L +NLS G E + L NL +LE L+L ++ T +
Sbjct: 815 SDAFVGIPNLVMMNLSHNYLNGMEK------SGLNNLRNLEVLDLSHNKLKQITTRSIQN 868
Query: 284 FKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN---SGLGSFKPPRSLKLLDL 340
LI L L N L ++ +S+L LS+RD +T+ S S KP ++ LD+
Sbjct: 869 MHSLIMLKLDNNRLCNIVGSPFEGMSRLRVLSLRDNKMTSLSESTFNSIKP--TISRLDV 926
Query: 341 HGG 343
G
Sbjct: 927 DGN 929
>gi|326493262|dbj|BAJ85092.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 417
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 86/182 (47%), Gaps = 11/182 (6%)
Query: 21 GESVQKWRR-QRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVD 79
G ++W R Q RL A S+LR L R FP +LE+ + + +D
Sbjct: 39 GLVCRRWLRIQSSERRRLRARAGPSMLRRLAAR---FPGILELDLSQSPSRSFY-PGVID 94
Query: 80 AEWMAYLGAFRYLRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLS 138
+ G F LR L + +C+ +T + L G+ CL+ LD+S C K++D G+K + S
Sbjct: 95 DDLNVIAGGFCNLRVLALQNCKGITDVGMVKLGEGLPCLQTLDVSHCKKLSDKGLKVVAS 154
Query: 139 -ISTLEKLWLSETGLTADGI--ALLSSLQNLSVLDLGGL-PVTDLVLRSL-QVLTKLEYL 193
L +L ++ L D + A+ S NL L GL +TD + +L K++ L
Sbjct: 155 GCRKLRQLHIAGCRLITDNLLRAMSKSCLNLEELGAAGLNSITDAGISALADGCHKMKSL 214
Query: 194 DL 195
D+
Sbjct: 215 DI 216
>gi|21674346|ref|NP_662411.1| Rab family protein [Chlorobium tepidum TLS]
gi|21647522|gb|AAM72753.1| Rab family protein [Chlorobium tepidum TLS]
Length = 1102
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 102/191 (53%), Gaps = 19/191 (9%)
Query: 127 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLV-LRSLQ 185
++TD + L S+++L LWL G IA L SL++L+ L L +TD+ L SL+
Sbjct: 96 QITD--IAPLASLNSLSMLWL--FGNKISDIAPLESLKSLTELQLSSNQITDIAPLASLK 151
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVG 245
LT+L L G+ +S+ A L+ L+ L+L+ +T + ++SL+ L ++
Sbjct: 152 SLTELS---LSGNNISD--IAPLESLKSLTELSLSSNQITDIAPLASLKSLT-----ELS 201
Query: 246 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 305
++ + + L++L L L L + Q+SD + PL + K L L L + +TD++ L
Sbjct: 202 LSSNQISDIAPLESLKSLTELQLSRNQISD--IAPLESLKSLTELQLSSNQITDIA--PL 257
Query: 306 SSLSKLTNLSI 316
+SL LT L +
Sbjct: 258 ASLKSLTELQL 268
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 128/247 (51%), Gaps = 26/247 (10%)
Query: 72 LRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDA 131
L G N D +A L + + L L+++ ++T A L + L EL LS +++D
Sbjct: 158 LSGNNISD---IAPLESLKSLTELSLS-SNQITDIA--PLASLKSLTELSLSSN-QISD- 209
Query: 132 GMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLV-LRSLQVLTKL 190
+ L S+ +L +L LS ++ IA L SL++L+ L L +TD+ L SL+ LT+L
Sbjct: 210 -IAPLESLKSLTELQLSRNQIS--DIAPLESLKSLTELQLSSNQITDIAPLASLKSLTEL 266
Query: 191 EYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDL 250
+ L +Q+S+ A L+ LS L W ++ +I+ L LN + ++ ++
Sbjct: 267 Q---LSRNQISD--IAPLESLNSLSKL---WLNGNQITDIAPLASLN--SLTELELSSNQ 316
Query: 251 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 310
+ + L +L L L L Q+SD + PL++ + L LSL + ++D+S L+SL+
Sbjct: 317 ITDIAPLASLKSLSTLWLSSNQISD--IAPLASLESLSELSLSSNQISDIS--PLASLNS 372
Query: 311 LTNLSIR 317
LT +R
Sbjct: 373 LTGFDVR 379
Score = 38.1 bits (87), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 64/125 (51%), Gaps = 11/125 (8%)
Query: 214 LSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQV 273
L+ L++ W K+ +I+ LE L + ++ ++ + + L +L L L+L +
Sbjct: 106 LNSLSMLWLFGNKISDIAPLESL--KSLTELQLSSNQITDIAPLASLKSLTELSLSGNNI 163
Query: 274 SDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPR 333
SD + PL + K L LSL + +TD++ L+SL LT LS L+++ + P
Sbjct: 164 SD--IAPLESLKSLTELSLSSNQITDIA--PLASLKSLTELS-----LSSNQISDIAPLE 214
Query: 334 SLKLL 338
SLK L
Sbjct: 215 SLKSL 219
>gi|72391044|ref|XP_845816.1| leucine-rich repeat protein (LRRP) [Trypanosoma brucei TREU927]
gi|62176443|gb|AAX70551.1| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei]
gi|70802352|gb|AAZ12257.1| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 543
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 118/258 (45%), Gaps = 32/258 (12%)
Query: 82 WMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIST 141
+ LGA L+ LN A +T L L+ LK+L LS+C ++T+ + L +++T
Sbjct: 221 GIGALGALPRLKILN-ASLTGITDECLARLSASQSLKKLLLSKCERLTN--VSRLDTVTT 277
Query: 142 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVS 201
L++L L+E GI L +L L LDL G V D L +L
Sbjct: 278 LQELDLAECKNVVSGIGSLGTLPVLQCLDLSGTGVADDDLCALSC--------------- 322
Query: 202 NRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLN 261
A + K+ + L T V+ L + +L+ +N +G +++ L + L
Sbjct: 323 --SATISKLIMKRCVL---LTNVSPLEKLRTLQHVN------IGECINVIEGLNSFSELP 371
Query: 262 HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAV 320
L L + T V++ L +ST + ++ L++ + +TD+S L++L L +++I
Sbjct: 372 SLRTLYMHYTPVTNECLSVISTSQSIVSLNIAACTRITDISC--LANLKTLEDVNINMCE 429
Query: 321 LTNSGLGSFKPPRSLKLL 338
GLG +L++L
Sbjct: 430 SVEKGLGDISGLSNLRML 447
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 16/172 (9%)
Query: 56 FPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMT 115
PSL ++ H V E ++ + + + SLN+A C R+T + L +
Sbjct: 370 LPSLRTLYMHYT---------PVTNECLSVISTSQSIVSLNIAACTRITD--ISCLANLK 418
Query: 116 CLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP 175
L++++++ C V + G+ + +S L L T L + + ++SS NL L G
Sbjct: 419 TLEDVNINMCESV-EKGLGDISGLSNLRMLSARSTVLDDECVKIMSSSSNLERSSLEGCA 477
Query: 176 -VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK 226
+TD+ L + LEY++L V +G A L P L ++L T + +
Sbjct: 478 KITDVT--PLAAVKSLEYVNLDNCPVV-KGIAELGKLPLLRVISLRETNICE 526
>gi|428212495|ref|YP_007085639.1| hypothetical protein Oscil6304_2053 [Oscillatoria acuminata PCC
6304]
gi|428000876|gb|AFY81719.1| leucine-rich repeat (LRR) protein [Oscillatoria acuminata PCC 6304]
Length = 455
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 102/212 (48%), Gaps = 24/212 (11%)
Query: 108 LWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLS 167
L L G+ + EL L+ V A + L +++TLE L+E + IA L+SL L
Sbjct: 245 LAPLKGLPEMAELQLNNNQIVNVAPLASLTNLTTLE---LNENQIK--DIAPLASLTQLG 299
Query: 168 VLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT---GV 224
L L + ++ L LTKLE L L +++ + A L L+FL L V
Sbjct: 300 FLQLTKNQIVNI--SPLATLTKLETLQLLYNEI--KDVAPLASLTNLTFLTLGENQIKDV 355
Query: 225 TKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTF 284
L +++ L L+LS + + + L NL L L+L Q+ D PL++
Sbjct: 356 APLASLTELTSLDLS--------NNEIKDIDPLANLTQLTFLHLSDNQIKDVA--PLASL 405
Query: 285 KELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 316
+L HL LRN + D++ +L +L+++ N S+
Sbjct: 406 TQLKHLHLRNNEIKDIA--RLPNLTQMDNFSV 435
>gi|423576853|ref|ZP_17552972.1| hypothetical protein II9_04074 [Bacillus cereus MSX-D12]
gi|401206603|gb|EJR13391.1| hypothetical protein II9_04074 [Bacillus cereus MSX-D12]
Length = 766
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 130/280 (46%), Gaps = 26/280 (9%)
Query: 41 LADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRY---LRSLNV 97
+ D+ LR L+ +++ L E ++++ E + Y A +Y L+SL V
Sbjct: 191 ITDNKLRELVNKKVFNRKDLNTPITKEELLQVKDLFLNTNEILDY-SALKYMPNLKSLTV 249
Query: 98 ADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGI 157
A+ + S T + LK L L R + +D L+ + L+ L LS +T +
Sbjct: 250 ANAKIKDPSFF---TSLKQLKHLAL-RGNEFSDVTT--LVKMDNLDSLDLSNNKIT--NV 301
Query: 158 ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 217
A L ++N+ L L G + D+ +L + +L+YL+L ++++N A L +++L
Sbjct: 302 APLIEMKNVKSLYLSGNQIEDVT--ALAKMEQLDYLNLANNKITN--VAPLSALKNVTYL 357
Query: 218 NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDAT 277
LA + + + SL +L + + V L+ ++ + LE L + + ++ D T
Sbjct: 358 TLAGNQIEDIKPLYSLPLKDLVLTR------NKVKDLSGIEQMKQLEELWIGKNEIKDVT 411
Query: 278 LFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 317
PLS +L L L N L D++ LSSL L L +
Sbjct: 412 --PLSKMTQLKQLHLPNNELKDIT--PLSSLVNLQKLDLE 447
>gi|395816683|ref|XP_003781825.1| PREDICTED: F-box/LRR-repeat protein 2 isoform 1 [Otolemur
garnettii]
Length = 423
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 160/342 (46%), Gaps = 26/342 (7%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC-LKELDLSRCVK 127
+ LRG V D+ + R + LN+ C ++T S ++L+ LK LDL+ CV
Sbjct: 83 LSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVS 142
Query: 128 VTDAGMKHLL-SISTLEKLWLSETG-LTADGI-ALLSSLQNLSVLDLGGLP-VTDLVLRS 183
+T++ +K + LE L LS +T DGI AL+ + L L L G + D L+
Sbjct: 143 ITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKH 202
Query: 184 LQ-VLTKLEYLDLWG-SQVSNRGAA-VLKMFPRLSFLNLAWTGVTKLPNIS----SLECL 236
+Q +L L+L S++++ G + + RL L L +G + L + S L C
Sbjct: 203 IQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCL--SGCSNLTDASLTALGLNCP 260
Query: 237 NLSFIQQVGAE--TDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTF-KELIHLSL 292
L ++ TD +L A +N + LE+++LE+ ++D+TL LS +L LSL
Sbjct: 261 RLQILEAARCSHLTDAGFTLLA-RNCHDLEKMDLEECILITDSTLIQLSIHCPKLQALSL 319
Query: 293 RNASL-TDVSLHQLSSLS----KLTNLSIRDAVL-TNSGLGSFKPPRSLKLLDLHGGWLL 346
+ L TD + LS+ + +L L + + +L T+ L + L+ L+L+ +
Sbjct: 320 SHCELITDDGILHLSNSTCGHERLRVLELDNCLLITDVALEHLENCLGLERLELYDCQQV 379
Query: 347 TEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSL 388
T I + P ++V + + P + +G R +
Sbjct: 380 TRAGIKRMRAQLPHVKVHAYFAPVTPPTAVAGSGQRLCRCCV 421
>gi|356563009|ref|XP_003549759.1| PREDICTED: EIN3-binding F-box protein 1-like [Glycine max]
Length = 639
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 126/284 (44%), Gaps = 45/284 (15%)
Query: 60 LEVFKHNAEAIE---LRGENSVDAEWMAYLGAFRYLR---SLNVADCRRVTSSALWAL-T 112
L V H +AI L G +V +GA + L+ SL V CR +T +++ A+
Sbjct: 307 LAVICHYGKAITNLVLSGLKNVTERGFWVMGAAQGLQKLVSLTVTSCRGITDTSIEAIGK 366
Query: 113 GMTCLKELDLSRCVKVTDAGMKHLLSIS-TLEKLWLSETG-LTADGIALL-----SSLQN 165
G LK+L L RC V+D+G+ + +LE L L E T GI + + L++
Sbjct: 367 GCINLKQLCLHRCCFVSDSGLVAFAKAAVSLESLQLEECNRFTQSGIIVALANIKTKLKS 426
Query: 166 LSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF----PRLSFLNL-A 220
LS++ G+ D+ + L L L + + G+A L M PRL LNL
Sbjct: 427 LSLVKCMGVKDIDMEVCMLSPCESLRSLVI--QKCPGFGSASLAMIGKLCPRLQHLNLTG 484
Query: 221 WTGVTK-------------LPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLN 267
G+T L N++ C NL TD V+S A + LE LN
Sbjct: 485 LYGITDAGLLPLLENCEAGLVNVNLTGCWNL---------TDKVVSALARLHGGTLEVLN 535
Query: 268 LEQT-QVSDATLFPLS-TFKELIHLSLRNASLTDVSLHQLSSLS 309
L+ +++DA+L ++ F L L + +++D + LS S
Sbjct: 536 LDGCWKITDASLVAIANNFLVLNDLDVSKCAISDAGIALLSRAS 579
>gi|449485666|ref|XP_004157239.1| PREDICTED: F-box/LRR-repeat protein 3-like [Cucumis sativus]
Length = 640
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 123/268 (45%), Gaps = 31/268 (11%)
Query: 117 LKELDLSRCVKVTDAGMKHLL-SISTLEKLWLSETGLTAD-GIALLSS-LQNLSVLDLGG 173
LKE+ L +C+ VTD G+ ++ LE+L L +D G+ LL NL LDL
Sbjct: 146 LKEVRLDKCLGVTDVGLARIVVGCGRLERLSLKWCLQVSDLGLELLCKKCFNLRFLDLSY 205
Query: 174 LPVTDLVLRSLQVLTKLEYL--------DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 225
L VT+ LRS+ L KLE L D G Q G LK ++ G+T
Sbjct: 206 LKVTNESLRSISSLPKLETLVMAGCLSVDDAGLQFLEHGCPFLKKLDISRCDGISSYGLT 265
Query: 226 K-LPNISSLECLNLSF-IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLST 283
L LE L+ S+ I ++ + S+ +L+NL L+ + L+ TQ+S +S
Sbjct: 266 SILRGHDGLEQLDASYCISELSTD-----SIYSLKNLKCLKAIRLDGTQLSSTFFNVISV 320
Query: 284 FKE-LIHLSLRNA-SLTDVSLHQLSSLS---KLTNL----SIRDAVLTNSGLGSFKPPRS 334
E L+ L L +TD ++ QL+S K+ NL SI DA ++ + K
Sbjct: 321 HCEYLVELGLSKCLGVTDANIIQLTSRCISLKVLNLTCCHSITDAAISKTATSCLK---- 376
Query: 335 LKLLDLHGGWLLTEDAILQFCKMHPRIE 362
L L L ++TE ++ Q P +E
Sbjct: 377 LMSLKLESCNMITERSLDQLALNCPSLE 404
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 5/111 (4%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC--LKELDLSRC 125
E ++L V+ + + L L SL + C +T L + G+ C + ELDL RC
Sbjct: 404 EELDLTDCCGVNDKGLECLSRCSQLLSLKLGLCTNITDKGLIKI-GLNCKRIHELDLYRC 462
Query: 126 VKVTDAGMKHLLSIS-TLEKLWLSETG-LTADGIALLSSLQNLSVLDLGGL 174
+ + DAG++ L S L KL LS LT G+ + L+ L VL++ GL
Sbjct: 463 LGIGDAGLEALSSGGKKLMKLNLSYCNKLTDRGMGYIGHLEELCVLEIRGL 513
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 24/149 (16%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMK 134
N + M Y+G L L + VTS L A+ G L +LD+ +C V DAG
Sbjct: 489 NKLTDRGMGYIGHLEELCVLEIRGLHNVTSVGLTAVAAGCKRLVDLDMKQCQNVDDAGFW 548
Query: 135 HLLSIS-TLEKLWLSETGLTADGIAL----LSSLQNLSVLDLGGLPVT--DLVLRSLQVL 187
L S + L +L +S ++ G+ + L+ LQ++ +++L + V DL LR+ +
Sbjct: 549 ALASYAHNLRQLNVSSCAVSDVGLCMMMGNLTCLQDVKLVNLNKVSVRGFDLALRTCCLR 608
Query: 188 TK----------------LEYLDLWGSQV 200
K LE L+ WG ++
Sbjct: 609 IKKVKLHASLRFMLSSETLEILNAWGCKI 637
>gi|261329243|emb|CBH12222.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 543
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 118/258 (45%), Gaps = 32/258 (12%)
Query: 82 WMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIST 141
+ LGA L+ LN A +T L L+ LK+L LS+C ++T+ + L +++T
Sbjct: 221 GIGALGALPRLKILN-ASLTGITDECLARLSASQSLKKLLLSKCERLTN--VSRLDTVTT 277
Query: 142 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVS 201
L++L L+E GI L +L L LDL G V D L +L
Sbjct: 278 LQELDLAECKNVVSGIGSLGTLPVLQCLDLSGTGVADDDLCTLSC--------------- 322
Query: 202 NRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLN 261
A + K+ + L T V+ L + +L+ +N +G +++ L + L
Sbjct: 323 --SATISKLIMKRCVL---LTNVSPLEKLRTLQHVN------IGECINVIEGLNSFSELP 371
Query: 262 HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAV 320
L L + T V++ L +ST + ++ L++ + +TD+S L++L L +++I
Sbjct: 372 SLRTLYMHYTPVTNECLSVISTSQSIVSLNIAACTRITDISC--LANLKTLEDVNINMCE 429
Query: 321 LTNSGLGSFKPPRSLKLL 338
GLG +L++L
Sbjct: 430 SVEKGLGDISGLSNLRML 447
>gi|255523038|ref|ZP_05390010.1| leucine-rich repeat protein [Clostridium carboxidivorans P7]
gi|255513153|gb|EET89421.1| leucine-rich repeat protein [Clostridium carboxidivorans P7]
Length = 421
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 113/225 (50%), Gaps = 19/225 (8%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLW-LSETGLTADGIALLSSLQNLSVLDLGGLP 175
+ EL C +D +K++ I L L L+ T + I+ L L NL L L
Sbjct: 164 ITELMEQNCGIKSDNTIKYINGIEGLVNLQSLTLTYCQIEDISPLKGLTNLKELMLYDDN 223
Query: 176 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLEC 235
+TD+ L+ LT LE+L+L+G+Q+++ L+ +L ++L G K+ +I+ L
Sbjct: 224 ITDI--SPLKGLTNLEFLELYGNQITD--IPSLEGLTKLKDIDL---GNNKIHDITLLR- 275
Query: 236 LNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 295
LS +Q++ + + +++L+ L +L L+L+ +SD + PL L LSL +
Sbjct: 276 -ELSNLQELNLVYNKITDISSLKELTNLNSLDLDNNNISDIS--PLEKLSNLKSLSLGSN 332
Query: 296 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
+TD+ SSL LTNL+ VL ++ + P + L L+
Sbjct: 333 KITDI-----SSLKGLTNLN--SLVLDDNNITDISPLKGLTNLNF 370
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 130/295 (44%), Gaps = 43/295 (14%)
Query: 38 PAHLADSLLRHLIRRRLIF--PSLLEVFKHNAEAIE--------LRGENSVDAEWMAYLG 87
P DS+ LIR ++ P + K + E I ++ +N++ +++ +
Sbjct: 130 PIVFKDSVFERLIRNKIQVNKPDWETLNKSDVENITELMEQNCGIKSDNTI--KYINGIE 187
Query: 88 AFRYLRSLNVADCRRVTSSALWALTGMTCLKEL--------DLSRCVKVTDAGM-----K 134
L+SL + C+ + L G+T LKEL D+S +T+
Sbjct: 188 GLVNLQSLTLTYCQ---IEDISPLKGLTNLKELMLYDDNITDISPLKGLTNLEFLELYGN 244
Query: 135 HLLSISTLEKLW-LSETGLTAD---GIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKL 190
+ I +LE L L + L + I LL L NL L+L +TD+ SL+ LT L
Sbjct: 245 QITDIPSLEGLTKLKDIDLGNNKIHDITLLRELSNLQELNLVYNKITDI--SSLKELTNL 302
Query: 191 EYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDL 250
LDL + +S+ + +LS L G K+ +ISSL+ L+ + + + +
Sbjct: 303 NSLDLDNNNISD-----ISPLEKLSNLKSLSLGSNKITDISSLK--GLTNLNSLVLDDNN 355
Query: 251 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 305
+ ++ L+ L +L LNL ++SD + PL L L L++ +V +L
Sbjct: 356 ITDISPLKGLTNLNFLNLGSNKISDIS--PLEGLTNLSTLWLKDTPTNEVYKEKL 408
>gi|357619268|gb|EHJ71912.1| hypothetical protein KGM_06037 [Danaus plexippus]
Length = 453
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 146/347 (42%), Gaps = 56/347 (16%)
Query: 13 CIEAACQSGESVQKW-----RRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNA 67
C E ++G +Q++ RR R + A D + LI++ FP + H+
Sbjct: 119 CRELRSETGCCMQRFYNSVVRRGIRGFVLISA--TDDDINELIKQ---FP----LSAHHI 169
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLK----ELDLS 123
AI L+G D + L + L L + C +T + LWA CL L L+
Sbjct: 170 HAIGLKGCTITDRGLESILDHLQVLFELELTGCNEITEAGLWA-----CLTPRIVSLTLT 224
Query: 124 RCVKVTDAGMKHLLS-ISTLEKLWLSETGLTADGIALLSSLQ--NLSVLDLGGL--PVTD 178
C+ + D + + + +L + L +T + S Q +LS+L L
Sbjct: 225 DCINIADEAVGAVAQLLPSLYEFSLQAYHVTDAALGYFSPKQSASLSILRLHSCWELTNH 284
Query: 179 LVLRSLQVLTKLEYLDLWG-SQVSNRGAAVL-KMFPRLSFLNLAWTGVTKLPNISSLECL 236
V+ + L L L L G S+V++ G +L + PRL L+L+W P +
Sbjct: 285 GVVNIVHSLPNLTVLSLSGCSKVTDEGVELLAENLPRLRSLDLSWC-----PRV------ 333
Query: 237 NLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNA 295
TD L A +LN LE L L++ ++D + +ST + L L LR
Sbjct: 334 -----------TDNALEYIAC-DLNQLEELTLDRCVHITDIGVGYISTMQSLAALFLRWC 381
Query: 296 S-LTDVSLHQLSSLSKLTNLSIRDA-VLTNSGLGSFKPPRSLKLLDL 340
S + D + L + L LS+ +LT+ GL S R L+ L+L
Sbjct: 382 SQVRDFGVQHLCGMRSLQLLSLAGCPLLTSGGLSSLIQLRQLRELEL 428
>gi|389857079|ref|YP_006359322.1| putative lipoprotein [Streptococcus suis ST1]
gi|353740797|gb|AER21804.1| putative lipoprotein [Streptococcus suis ST1]
Length = 465
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 13/159 (8%)
Query: 158 ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 217
A L + N+ VL +G P+ D+ + + KL+ L W + + LK P L +
Sbjct: 140 AGLDLMPNVEVLGIGFTPIDDV--KPILQFKKLKQL--WMTSTGVKDYQFLKEIPTLEGI 195
Query: 218 NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDAT 277
+L+ GV+ L + E NL + G + + +T L L LE LNL+ +V+D
Sbjct: 196 DLSQNGVSDLGFLE--EFPNLKVVSAAGND---IEDITILAKLKALESLNLDHNKVTD-- 248
Query: 278 LFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 316
L PL+ +L +SL N +TD+S L + KLT L I
Sbjct: 249 LSPLADLSQLTAVSLDNNRITDLSA--LQNKKKLTRLYI 285
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 102/234 (43%), Gaps = 24/234 (10%)
Query: 120 LDLSRCVKVTDAG------MKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 173
LDL V+V G +K +L L++LW++ TG+ L + L +DL
Sbjct: 142 LDLMPNVEVLGIGFTPIDDVKPILQFKKLKQLWMTSTGVK--DYQFLKEIPTLEGIDLSQ 199
Query: 174 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 233
V+DL L+ L+ + G+ + + +L L LNL VT L ++
Sbjct: 200 NGVSDLGF--LEEFPNLKVVSAAGNDIED--ITILAKLKALESLNLDHNKVTDLSPLA-- 253
Query: 234 ECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 293
+LS + V + + + L+ALQN L RL + Q D + +E L+
Sbjct: 254 ---DLSQLTAVSLDNNRITDLSALQNKKKLTRLYISQNPQLDISTLKTENLEE---LTAN 307
Query: 294 NASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLT 347
+++ D+ + + LT+L++++ +T L + L LD+ G + T
Sbjct: 308 ESNVKDLQF--VKNNPNLTSLTLKNNKITE--LQGIEENEKLVNLDVEGNQIKT 357
>gi|167887259|gb|ACA09289.1| InlE [Listeria monocytogenes]
Length = 186
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 91/189 (48%), Gaps = 35/189 (18%)
Query: 156 GIALLSSLQ---NLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMF 211
GI + LQ NLS L+L VTDL L+ LTK+ L L G+ + + A A LK
Sbjct: 4 GITTIEGLQYLTNLSELELIDNQVTDL--NPLKNLTKITELRLSGNPLKDVSALAGLKNL 61
Query: 212 PRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 271
+ + T VT L +S+L+ LNL Q + +T L L++L+ L+ T
Sbjct: 62 KTMDLIYTDITDVTPLAGLSNLQVLNLDINQ--------ITDITPLAGLSNLQFLSFGST 113
Query: 272 QVSDATLFPLSTFKELIHLSLRNASLTDVS-----------------LHQLSSLSKLTNL 314
QVSD L PL+ +L L+ N+ ++DVS + +S L+KL NL
Sbjct: 114 QVSD--LXPLANLSKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQISDVSPLAKLPNL 171
Query: 315 SIRDAVLTN 323
SI LTN
Sbjct: 172 SI--VTLTN 178
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 99/194 (51%), Gaps = 16/194 (8%)
Query: 106 SALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQN 165
+ + L +T L EL+L +VTD + L +++ + +L LS G ++ L+ L+N
Sbjct: 6 TTIEGLQYLTNLSELELIDN-QVTD--LNPLKNLTKITELRLS--GNPLKDVSALAGLKN 60
Query: 166 LSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 225
L +DL +TD+ L L+ L+ L+L +Q+++ L L FL+ T V+
Sbjct: 61 LKTMDLIYTDITDVT--PLAGLSNLQVLNLDINQITD--ITPLAGLSNLQFLSFGSTQVS 116
Query: 226 KLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFK 285
L ++ NLS + + A V ++ L L++L + LE+ Q+SD + PL+
Sbjct: 117 DLXPLA-----NLSKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQISDVS--PLAKLP 169
Query: 286 ELIHLSLRNASLTD 299
L ++L N ++T+
Sbjct: 170 NLSIVTLTNQTITN 183
>gi|255982539|ref|NP_001157697.1| F-box/LRR-repeat protein 16 [Mus musculus]
gi|160011308|sp|A2RT62.1|FXL16_MOUSE RecName: Full=F-box/LRR-repeat protein 16; AltName: Full=F-box and
leucine-rich repeat protein 16
gi|124376262|gb|AAI32384.1| Fbxl16 protein [Mus musculus]
gi|148690508|gb|EDL22455.1| mCG17674 [Mus musculus]
gi|187952677|gb|AAI37658.1| F-box and leucine-rich repeat protein 16 [Mus musculus]
Length = 479
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 64/121 (52%), Gaps = 14/121 (11%)
Query: 58 SLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSAL-WALTGMTC 116
SL K + +EL EN R LRSL+++ C R+T AL + +
Sbjct: 326 SLSGCSKVTDDGVELVAEN------------LRKLRSLDLSWCPRITDMALEYVACDLHR 373
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDLGGLP 175
L+EL L RCV++TD G+ +L ++S+L L+L D G+ L +++NL +L L G P
Sbjct: 374 LEELVLDRCVRITDTGLSYLSTMSSLRSLYLRWCCQVQDFGLKHLLAMRNLRLLSLAGCP 433
Query: 176 V 176
+
Sbjct: 434 L 434
>gi|91085811|ref|XP_974701.1| PREDICTED: similar to partner of paired CG9952-PA [Tribolium
castaneum]
Length = 439
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 98/212 (46%), Gaps = 42/212 (19%)
Query: 40 HLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVAD 99
H+ D ++HL PSL E + L+ + E + + L S+N++
Sbjct: 234 HVGDQGIQHLASGN---PSL--------EHLGLQDCQKLSDEALKHATGLTSLISINLSF 282
Query: 100 CRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHL---------LSISTLEK------ 144
C +T S L L MT L+EL+L C ++D GM L L +S +K
Sbjct: 283 CVSITDSGLKHLAKMTNLRELNLRSCDNISDTGMAFLAEGGSRISSLDVSFCDKIGDQAL 342
Query: 145 ------------LWLSETGLTADGIA-LLSSLQNLSVLDLGGLP-VTDLVLRSL-QVLTK 189
L +S L+ +G+A + +SL +L L++G VTD L ++ + L +
Sbjct: 343 VHISQGLFNLRNLLMSACQLSDEGLAKIANSLHDLETLNIGQCSRVTDKGLTTIAESLLR 402
Query: 190 LEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLA 220
L+ +DL+G ++++ G + P+LS LNL
Sbjct: 403 LKCIDLYGCTRITTVGLERIMKLPQLSVLNLG 434
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 97/190 (51%), Gaps = 25/190 (13%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWL---- 147
L L + DC++++ AL TG+T L ++LS CV +TD+G+KHL ++ L +L L
Sbjct: 250 LEHLGLQDCQKLSDEALKHATGLTSLISINLSFCVSITDSGLKHLAKMTNLRELNLRSCD 309
Query: 148 --SETGLT--ADGIALLSSLQNLSVLDLGGLPVTDLVLRSL-QVLTKLEYLDLWGSQVSN 202
S+TG+ A+G + +SSL ++S D + D L + Q L L L + Q+S+
Sbjct: 310 NISDTGMAFLAEGGSRISSL-DVSFCD----KIGDQALVHISQGLFNLRNLLMSACQLSD 364
Query: 203 RG-AAVLKMFPRLSFLNLAWT------GVTKLP-NISSLECLNL---SFIQQVGAETDLV 251
G A + L LN+ G+T + ++ L+C++L + I VG E +
Sbjct: 365 EGLAKIANSLHDLETLNIGQCSRVTDKGLTTIAESLLRLKCIDLYGCTRITTVGLERIMK 424
Query: 252 LSLTALQNLN 261
L ++ NL
Sbjct: 425 LPQLSVLNLG 434
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 124/287 (43%), Gaps = 54/287 (18%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSIS-TLEKLW 146
+ L L + C VT+S L + G+ LK L+L C V D G++HL S + +LE L
Sbjct: 195 LKNLEVLELGGCSNVTNSGLMLIAWGLKKLKRLNLRSCWHVGDQGIQHLASGNPSLEHLG 254
Query: 147 LSET-GLTADGIALLSSLQNLSVLDLG-GLPVTDLVLRSLQVLTKLEYLDLWG-SQVSNR 203
L + L+ + + + L +L ++L + +TD L+ L +T L L+L +S+
Sbjct: 255 LQDCQKLSDEALKHATGLTSLISINLSFCVSITDSGLKHLAKMTNLRELNLRSCDNISDT 314
Query: 204 GAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHL 263
G A LA G S + L++SF ++G + + +S Q L +L
Sbjct: 315 GMAF-----------LAEGG-------SRISSLDVSFCDKIGDQALVHIS----QGLFNL 352
Query: 264 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
L + Q+SD L ++ SLH L +L+ + D LT
Sbjct: 353 RNLLMSACQLSDEGLAKIAN-----------------SLHDLETLNIGQCSRVTDKGLTT 395
Query: 324 SGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEV-----WH 365
+ LK +DL+G +T + + K+ P++ V WH
Sbjct: 396 IAESLLR----LKCIDLYGCTRITTVGLERIMKL-PQLSVLNLGLWH 437
>gi|290985427|ref|XP_002675427.1| predicted protein [Naegleria gruberi]
gi|284089023|gb|EFC42683.1| predicted protein [Naegleria gruberi]
Length = 324
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 114/267 (42%), Gaps = 27/267 (10%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G+N + E + + L SLN++D + ++ M L L++ C ++ G
Sbjct: 33 GKNEIGDEEAKLISEMKQLTSLNISD-NLIGDEGAKLISEMKQLTSLNIC-CNRIGVEGA 90
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
K+L + L L + E + +G L+S + L+ L++G + + + + +L L
Sbjct: 91 KYLSEMKQLISLNICENEIGDEGAKLISETRQLTSLNIGFTQIGGEGAKFISEMKQLTSL 150
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLS 253
D+ + + GA + +L+ LN++ NL +G E ++S
Sbjct: 151 DISDNLIGVEGAKFISEMKQLTSLNISD---------------NL-----IGDEGAKLIS 190
Query: 254 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 313
+ L LN+ Q+ + +S K+L L + N + D +S + +LT+
Sbjct: 191 -----EMKQLTSLNISNNQIGGEGVKLISEMKQLTSLDISNNQIGDEGAKLISEMKQLTS 245
Query: 314 LSIRDAVLTNSGLGSFKPPRSLKLLDL 340
L+I + + G S + LK LD+
Sbjct: 246 LNISGNRIGDEGAKSMSEMKQLKSLDI 272
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 30/145 (20%), Positives = 72/145 (49%), Gaps = 2/145 (1%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
+ E ++ + L SL+++D A + ++ M L L++S + + D G K +
Sbjct: 133 IGGEGAKFISEMKQLTSLDISDNLIGVEGAKF-ISEMKQLTSLNISDNL-IGDEGAKLIS 190
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
+ L L +S + +G+ L+S ++ L+ LD+ + D + + + +L L++ G
Sbjct: 191 EMKQLTSLNISNNQIGGEGVKLISEMKQLTSLDISNNQIGDEGAKLISEMKQLTSLNISG 250
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWT 222
+++ + GA + +L L++++
Sbjct: 251 NRIGDEGAKSMSEMKQLKSLDISYN 275
>gi|423371410|ref|ZP_17348750.1| hypothetical protein IC5_00466 [Bacillus cereus AND1407]
gi|401103236|gb|EJQ11221.1| hypothetical protein IC5_00466 [Bacillus cereus AND1407]
Length = 766
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 131/280 (46%), Gaps = 26/280 (9%)
Query: 41 LADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRY---LRSLNV 97
+ D+ LR L+ +++ L E ++++ E + Y A +Y L+SL V
Sbjct: 191 ITDNKLRELVNKKVFNRKDLNTPITKEELLQVKDLFLNTNEILDY-SALKYMPNLKSLTV 249
Query: 98 ADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGI 157
A+ + S T + LK L L R + +D + L+ + L+ L LS +T +
Sbjct: 250 ANAKIKDPSFF---TSLKQLKHLAL-RGNEFSD--VTPLVKMDNLDSLDLSNNKIT--NV 301
Query: 158 ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 217
A L ++N+ L L G + D+ +L + +L+YL+L ++++N A L +++L
Sbjct: 302 APLIEMKNVKSLYLSGNQIEDVT--ALAKMEQLDYLNLANNKITN--VAPLSALKNVTYL 357
Query: 218 NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDAT 277
LA + + + SL +L + + V L+ ++ + LE L + + ++ D T
Sbjct: 358 TLAGNQIEDIKPLYSLPLKDLVLTR------NKVKDLSGIEQMKQLEELWIGKNEIKDVT 411
Query: 278 LFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 317
PLS +L L L N L D++ LSSL L L +
Sbjct: 412 --PLSKMTQLKQLHLPNNELKDIT--PLSSLVNLQKLDLE 447
>gi|115689700|ref|XP_783241.2| PREDICTED: F-box/LRR-repeat protein 13-like [Strongylocentrotus
purpuratus]
Length = 871
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 149/323 (46%), Gaps = 59/323 (18%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRY---LRSLNVADCRRVTSSALWALTGMTCLKELDLSR 124
+ I + G + LG RY LR + V+DC R+T +AL +L + L+++
Sbjct: 483 QQIRIEGNCKITDASFKLLG--RYCVDLRHIYVSDCPRITDAALKSLATCRNINVLNVAD 540
Query: 125 CVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL 184
C++++D G+++L+ + K L E LT + VTD+ S+
Sbjct: 541 CIRISDNGVRNLVEGPSGPK--LREMNLT------------------NCVRVTDV---SI 577
Query: 185 QVLTKLEYLDLWGS-----QVSNRGAAVLKMFPRLSFL-----NLAWTGVTKLPNISSLE 234
+T+ Y ++GS +++ GA +L P LS L N+ TG+ L N L
Sbjct: 578 MKITQKCYSLVYGSFCFSEHITDAGAEMLGNMPALSSLDISGCNITDTGLGALGNCYHLR 637
Query: 235 CLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPLS-TFKELIHLSL 292
+ LS Q+ TDL + A Q L+RL++ Q++D + L+ ++L L++
Sbjct: 638 DVVLSECHQI---TDLGIQKFA-QQCRDLDRLDISHCLQLTDQAIKNLAFCCRKLSFLNI 693
Query: 293 RNAS-LTDVSLHQLSSLSK-LTNLSIRDAVLTNSGLGSF-----KPPRSLKLLDLHGGWL 345
S L+D+S+ +S + L +L+ + + F K R+L +L H L
Sbjct: 694 AGCSQLSDMSIRYISGVCHYLQSLNFSGCIKVSDDSMRFLRKGLKRLRNLNMLYCH---L 750
Query: 346 LTEDAILQFCKMHPRIE--VWHE 366
+T+ I+ K+ +IE VW +
Sbjct: 751 ITKPTIV---KLSAKIEKVVWSD 770
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 116/252 (46%), Gaps = 18/252 (7%)
Query: 91 YLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL-SISTLEKLWLSE 149
Y+ LN+ C +T + A+ L++L++S C + D MK++ S L L +S
Sbjct: 300 YVLHLNIKGCSMLTKPSFKAVGQCRNLQDLNMSECPGLNDDTMKYVAEGCSVLLYLNISF 359
Query: 150 TGLTADGIALLS-SLQNLSVLDLGGLPVTDLVLRSLQVLT------KLEYLDLWGS-QVS 201
T +T + LL+ NL L L + LQ L +L +LDL G Q++
Sbjct: 360 TNITDATLRLLARCCSNLQYLSLA--YCKRFSDKGLQYLGTGRGGRRLVHLDLSGCPQIT 417
Query: 202 NRGAA-VLKMFPRLSFL--NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQ 258
G + P+L L N +T + + C N+ I + ++L AL
Sbjct: 418 VNGYKNISGGCPKLQHLIINDCYTLRDDMIVAVAANCHNIRCISFLYTPNITDVALKALA 477
Query: 259 NLNHLERLNLE-QTQVSDATLFPLSTF-KELIHLSLRNAS-LTDVSLHQLSSLSKLTNLS 315
L+++ +E +++DA+ L + +L H+ + + +TD +L L++ + L+
Sbjct: 478 VHRKLQQIRIEGNCKITDASFKLLGRYCVDLRHIYVSDCPRITDAALKSLATCRNINVLN 537
Query: 316 IRDAV-LTNSGL 326
+ D + ++++G+
Sbjct: 538 VADCIRISDNGV 549
>gi|345783005|ref|XP_852464.2| PREDICTED: F-box/LRR-repeat protein 13 [Canis lupus familiaris]
Length = 1050
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 110/240 (45%), Gaps = 19/240 (7%)
Query: 66 NAEAIELRGENSVDAEWMAYLGA-FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSR 124
N I G + Y+ + + + + DC+R+T +L +L+ + L L+L+
Sbjct: 717 NLRKIRFEGNKRITDACFKYIHKNYPNINHIYMVDCKRITDGSLMSLSPLKQLTVLNLAN 776
Query: 125 CVKVTDAGMKHLLS--IST-LEKLWLSETGLTADG--IALLSSLQNLSVLDLGGLP-VTD 178
C+++ D G+K L +ST + +L LS +D + L NL+ L L +TD
Sbjct: 777 CIRIGDVGLKQFLDGPVSTRIRELNLSNCIHLSDASIVKLSERCSNLNYLSLRNCEYLTD 836
Query: 179 LVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNIS- 231
L + + + L +DL G+ +SN G L +L L+L+ G+ S
Sbjct: 837 LGIEHIVYIFSLVSVDLSGTNISNEGLMSLSRHKKLKELSLSECYKITDVGIQAFCKGSL 896
Query: 232 SLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHL 290
LE L++S+ Q+ E L++ + +L L++ +++D+ + LS +H+
Sbjct: 897 ILEHLDVSYCPQLSDEIIKALAIYCI----YLTSLSIAGCPKITDSAMEMLSAKCHYLHI 952
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 127/289 (43%), Gaps = 27/289 (9%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLK--ELDLSRCVKVTDAGMKHLL-SISTLEK 144
F L++L++A CR+ T L L G C K LDLS C +++ G +++ S + +
Sbjct: 611 FPNLQNLSLAYCRKFTDKGLRYLNLGNGCHKLIYLDLSGCTQISVQGFRNIANSCTGIMH 670
Query: 145 LWLSETGLTADGI--ALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQVS 201
L +++ D AL ++ + G P ++D ++L L + G++
Sbjct: 671 LTINDMPTLTDNCVKALAEKCTRITSIVFIGAPHISDCAFKALST-CNLRKIRFEGNKRI 729
Query: 202 NRGA--AVLKMFPRLSFLNL---------AWTGVTKLPNISSLECLNLSFIQQVGAETDL 250
+ K +P ++ + + + ++ L ++ L N I VG + L
Sbjct: 730 TDACFKYIHKNYPNINHIYMVDCKRITDGSLMSLSPLKQLTVLNLANCIRIGDVGLKQFL 789
Query: 251 VLSLTALQNLNHLERLNLEQT-QVSDATLFPLST-FKELIHLSLRNAS-LTDVSLHQLSS 307
++ + LNL +SDA++ LS L +LSLRN LTD+ + +
Sbjct: 790 DGPVST-----RIRELNLSNCIHLSDASIVKLSERCSNLNYLSLRNCEYLTDLGIEHIVY 844
Query: 308 LSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 356
+ L ++ + ++N GL S + LK L L + +T+ I FCK
Sbjct: 845 IFSLVSVDLSGTNISNEGLMSLSRHKKLKELSLSECYKITDVGIQAFCK 893
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 113/240 (47%), Gaps = 41/240 (17%)
Query: 117 LKELDLSRCVKVTDAGMKHLL-SISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 171
L+EL++S C +TD M+++ + + L LS T +T + LL +LQNLS+
Sbjct: 563 LQELNVSDCPTLTDESMRYISEGCAGVLYLNLSNTTITNRTMRLLPRYFPNLQNLSLAYC 622
Query: 172 GGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLA--WTGVT 225
TD LR L + KL YLDL G +Q+S +G F N+A TG+
Sbjct: 623 RKF--TDKGLRYLNLGNGCHKLIYLDLSGCTQISVQG-----------FRNIANSCTGIM 669
Query: 226 KL-----PNIS-------SLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE-QTQ 272
L P ++ + +C ++ I +GA + AL N L ++ E +
Sbjct: 670 HLTINDMPTLTDNCVKALAEKCTRITSIVFIGAPHISDCAFKALSTCN-LRKIRFEGNKR 728
Query: 273 VSDATL-FPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSF 329
++DA + + + H+ + + +TD SL LS L +LT L++ + + + + GL F
Sbjct: 729 ITDACFKYIHKNYPNINHIYMVDCKRITDGSLMSLSPLKQLTVLNLANCIRIGDVGLKQF 788
>gi|242082530|ref|XP_002441690.1| hypothetical protein SORBIDRAFT_08g000800 [Sorghum bicolor]
gi|241942383|gb|EES15528.1| hypothetical protein SORBIDRAFT_08g000800 [Sorghum bicolor]
Length = 605
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 130/263 (49%), Gaps = 19/263 (7%)
Query: 79 DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGM---- 133
D E + + L L++ CR +T +L A+T + L L + C V+ +
Sbjct: 282 DTELSFAVSRLKNLLKLDITCCRNITDVSLAAITSSCSSLISLKMESCSHVSSGALQLIG 341
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLG-GLPVTDLVLRSL-QVLTKLE 191
KH S LE+L L+++ L +G+ LS LS L +G L ++D L + + KL
Sbjct: 342 KH---CSHLEELDLTDSDLDDEGLKALSRCSKLSSLKVGICLKISDEGLTHIGRSCPKLR 398
Query: 192 YLDLW--GSQVSNRGAAVLKMFPRLSFLNLAW-TGVTKLPNISSLECLNLSFIQQVGAE- 247
+DL+ G + + + P+L +NL++ T +T IS +C L+ ++ G
Sbjct: 399 EIDLYRCGGLSDDGIIQIAQGCPKLESMNLSYCTEITDRSLISLSKCTKLNTLEIRGCPM 458
Query: 248 -TDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPLSTFKE-LIHLSLRNASLTDVSLHQ 304
T LS A+ L +L++++ +++DA + LS F L ++L S+TD+ L
Sbjct: 459 ITSTGLSEIAM-GCRLLSKLDIKKCFEINDAGMLYLSQFSHSLRQINLSYCSVTDIGLLS 517
Query: 305 LSSLSKLTNLSIRD-AVLTNSGL 326
LS +S L N++I A +T +GL
Sbjct: 518 LSGISGLQNMTIVHLAGMTPNGL 540
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 63/116 (54%), Gaps = 7/116 (6%)
Query: 92 LRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSIS-TLEKLWLSE 149
L +L + C +TS+ L + G L +LD+ +C ++ DAGM +L S +L ++ LS
Sbjct: 448 LNTLEIRGCPMITSTGLSEIAMGCRLLSKLDIKKCFEINDAGMLYLSQFSHSLRQINLSY 507
Query: 150 TGLTADG---IALLSSLQNLSVLDLGGLPVTDLV--LRSLQVLTKLEYLDLWGSQV 200
+T G ++ +S LQN++++ L G+ L+ L LTK++ + + S V
Sbjct: 508 CSVTDIGLLSLSGISGLQNMTIVHLAGMTPNGLMATLMVCGGLTKVKLHEAFKSMV 563
>gi|167887247|gb|ACA09283.1| InlE [Listeria monocytogenes]
gi|167887249|gb|ACA09284.1| InlE [Listeria monocytogenes]
gi|167887261|gb|ACA09290.1| InlE [Listeria monocytogenes]
gi|167887263|gb|ACA09291.1| InlE [Listeria monocytogenes]
gi|167887267|gb|ACA09293.1| InlE [Listeria monocytogenes]
gi|167887295|gb|ACA09307.1| InlE [Listeria monocytogenes]
gi|167887297|gb|ACA09308.1| InlE [Listeria monocytogenes]
gi|167887299|gb|ACA09309.1| InlE [Listeria monocytogenes]
gi|167887303|gb|ACA09311.1| InlE [Listeria monocytogenes]
gi|167887329|gb|ACA09324.1| InlE [Listeria monocytogenes]
gi|167887331|gb|ACA09325.1| InlE [Listeria monocytogenes]
Length = 186
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 91/189 (48%), Gaps = 35/189 (18%)
Query: 156 GIALLSSLQ---NLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMF 211
GI + LQ NLS L+L VTDL L+ LTK+ L L G+ + + A A LK
Sbjct: 4 GITTIEGLQYLTNLSELELIDNQVTDL--NPLKNLTKITELRLSGNPLKDVSALAGLKNL 61
Query: 212 PRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 271
+ + T VT L +S+L+ LNL Q + +T L L++L+ L+ T
Sbjct: 62 KTMDLIYTDITDVTPLAGLSNLQVLNLDINQ--------ITDITPLAGLSNLQFLSFGST 113
Query: 272 QVSDATLFPLSTFKELIHLSLRNASLTDVS-----------------LHQLSSLSKLTNL 314
QVSD T PL+ +L L+ N+ ++DVS + +S L+KL NL
Sbjct: 114 QVSDLT--PLANLSKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQISDVSPLAKLPNL 171
Query: 315 SIRDAVLTN 323
SI LTN
Sbjct: 172 SI--VTLTN 178
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 22/197 (11%)
Query: 106 SALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQN 165
+ + L +T L EL+L +VTD + L +++ + +L LS G ++ L+ L+N
Sbjct: 6 TTIEGLQYLTNLSELELIDN-QVTD--LNPLKNLTKITELRLS--GNPLKDVSALAGLKN 60
Query: 166 LSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV- 224
L +DL +TD+ L L+ L+ L+L +Q+++ L L FL+ T V
Sbjct: 61 LKTMDLIYTDITDVT--PLAGLSNLQVLNLDINQITD--ITPLAGLSNLQFLSFGSTQVS 116
Query: 225 --TKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 282
T L N+S L LN A V ++ L L++L + LE+ Q+SD + PL+
Sbjct: 117 DLTPLANLSKLTTLN--------AMNSKVSDVSPLTGLSNLTEVYLEENQISDVS--PLA 166
Query: 283 TFKELIHLSLRNASLTD 299
L ++L N ++T+
Sbjct: 167 KLPNLSIVTLTNQTITN 183
>gi|146321433|ref|YP_001201144.1| leucine-rich repeat-containing protein [Streptococcus suis 98HAH33]
gi|145692239|gb|ABP92744.1| Leucine-rich repeat (LRR) protein [Streptococcus suis 98HAH33]
Length = 429
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 13/159 (8%)
Query: 158 ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 217
A L + N+ VL +G P+ D+ + + KL+ L W + + LK P L +
Sbjct: 104 AGLDLMPNVEVLGIGFTPIDDV--KPILQFKKLKQL--WMTSTGVKDYQFLKEIPTLEGI 159
Query: 218 NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDAT 277
+L+ GV+ L + E NL + G + + +T L L LE LNL+ +V+D
Sbjct: 160 DLSQNGVSDLGFLE--EFPNLKVVSAAGND---IEDITILAKLKALESLNLDHNKVTD-- 212
Query: 278 LFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 316
L PL+ +L +SL N +TD+S L + KLT L I
Sbjct: 213 LSPLADLSQLTAVSLDNNRITDLS--ALQNKKKLTRLYI 249
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 102/234 (43%), Gaps = 24/234 (10%)
Query: 120 LDLSRCVKVTDAG------MKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 173
LDL V+V G +K +L L++LW++ TG+ L + L +DL
Sbjct: 106 LDLMPNVEVLGIGFTPIDDVKPILQFKKLKQLWMTSTGVK--DYQFLKEIPTLEGIDLSQ 163
Query: 174 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 233
V+DL L+ L+ + G+ + + +L L LNL VT L ++
Sbjct: 164 NGVSDLGF--LEEFPNLKVVSAAGNDIED--ITILAKLKALESLNLDHNKVTDLSPLA-- 217
Query: 234 ECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 293
+LS + V + + + L+ALQN L RL + Q D + +E L+
Sbjct: 218 ---DLSQLTAVSLDNNRITDLSALQNKKKLTRLYISQNPQLDISTLKTENLEE---LTAN 271
Query: 294 NASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLT 347
+++ D+ + + LT+L++++ +T L + L LD+ G + T
Sbjct: 272 ESNVKDLQF--VKNNPNLTSLTLKNNKITE--LQGIEENEKLVNLDVEGNQIKT 321
>gi|290999054|ref|XP_002682095.1| predicted protein [Naegleria gruberi]
gi|284095721|gb|EFC49351.1| predicted protein [Naegleria gruberi]
Length = 357
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 123/275 (44%), Gaps = 13/275 (4%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
E++ +R N + AE + + L LNV+ R+ A++ M L LD+
Sbjct: 87 ESLSIR-YNYIGAEGAKVISEMKTLTWLNVS-SNRIGGEGAKAISQMKQLTYLDIGD--- 141
Query: 128 VTDAGMKHLLSISTLEKLW-LSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 186
G + ++ +S L++L LS + DGI +S + L L + + D L
Sbjct: 142 -NKVGDEEVILLSELDQLTALSIDRINPDGINAISKMNKLVSLSINNCTILDEC-EELSK 199
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT--GVTKLPNISSLECLNLSFIQQV 244
+ +L LD+ + +S +G L +L+ LN++ G +IS ++ L F+
Sbjct: 200 MKQLTLLDIKSNGISAKGVKQLSGLSQLTHLNISSNAFGDDGAKSISEIKQLTELFVNDC 259
Query: 245 GAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQ 304
D + +L +LN L L++ ++D L+ ++L L + N L+ +
Sbjct: 260 QISDD---GMKSLGDLNELTILDISNNYITDEGSLYLTKLEKLTALEVNNNELSYQGVKH 316
Query: 305 LSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 339
+ ++++LT LSIR T F + LKLL+
Sbjct: 317 MINMNQLTALSIRHNQFTFVQNEVFSQFKQLKLLN 351
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 99/224 (44%), Gaps = 23/224 (10%)
Query: 125 CVKVTDAGMKHLLSISTLEKLW---LSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVL 181
CV G++ IS LEKL + + A+G ++S ++ L+ L++ +
Sbjct: 66 CVDFNGIGLEGANYISQLEKLESLSIRYNYIGAEGAKVISEMKTLTWLNVSSNRIGGEGA 125
Query: 182 RSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL------AWTGVTKLPNISSL-- 233
+++ + +L YLD+ ++V + +L +L+ L++ ++K+ + SL
Sbjct: 126 KAISQMKQLTYLDIGDNKVGDEEVILLSELDQLTALSIDRINPDGINAISKMNKLVSLSI 185
Query: 234 -------ECLNLSFIQQ-----VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPL 281
EC LS ++Q + + + L L+ L LN+ D +
Sbjct: 186 NNCTILDECEELSKMKQLTLLDIKSNGISAKGVKQLSGLSQLTHLNISSNAFGDDGAKSI 245
Query: 282 STFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 325
S K+L L + + ++D + L L++LT L I + +T+ G
Sbjct: 246 SEIKQLTELFVNDCQISDDGMKSLGDLNELTILDISNNYITDEG 289
>gi|229195625|ref|ZP_04322391.1| Internalin [Bacillus cereus m1293]
gi|228587874|gb|EEK45926.1| Internalin [Bacillus cereus m1293]
Length = 772
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 130/280 (46%), Gaps = 26/280 (9%)
Query: 41 LADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRY---LRSLNV 97
+ D+ LR L+ +++ L E ++++ E + Y A +Y L+SL V
Sbjct: 197 ITDNKLRELVNKKVFNRKDLNTPITKEELLQVKDLFLNTNEILDY-SALKYMPNLKSLTV 255
Query: 98 ADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGI 157
A+ + S T + LK L L R + +D L+ + L+ L LS +T +
Sbjct: 256 ANAKIKDPSFF---TSLKQLKHLAL-RGNEFSDVTT--LVKMDNLDSLDLSNNKIT--NV 307
Query: 158 ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 217
A L ++N+ L L G + D+ +L + +L+YL+L ++++N A L +++L
Sbjct: 308 APLIEMKNVKSLYLSGNQIEDVT--ALAKMEQLDYLNLANNKITN--VAPLSALKNVTYL 363
Query: 218 NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDAT 277
LA + + + SL +L + + V L+ ++ + LE L + + ++ D T
Sbjct: 364 TLAGNQIEDIKPLYSLPLKDLVLTR------NKVKDLSGIEQMKQLEELWIGKNEIKDVT 417
Query: 278 LFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 317
PLS +L L L N L D++ LSSL L L +
Sbjct: 418 --PLSKMTQLKQLHLPNNELKDIT--PLSSLVNLQKLDLE 453
>gi|320167410|gb|EFW44309.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 702
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 96/218 (44%), Gaps = 18/218 (8%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
+TS + A T +T L +L L +T +S L +++L +T +T+ + +
Sbjct: 119 ITSMSASAFTDLTKLTQLSLDN-TPITSISANAFAGLSALTQMFLYQTQITSISASAFAD 177
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLS----FLN 218
L++L L L G +T + + LTKL YLDL +Q+++ A L+ + N
Sbjct: 178 LRSLQKLYLYGNRITSISANAFTGLTKLAYLDLSYNQITSISANAFADLSSLTDLRLYFN 237
Query: 219 ----LAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVS 274
LA T L ++ L LN Q+ A +S A LN L+ L L ++
Sbjct: 238 QMSSLAANTFTGLSALTQLSLLN----NQITA-----ISANAFTGLNALKLLYLHNNLIT 288
Query: 275 DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 312
+ L L + N ++T +S + + LS LT
Sbjct: 289 TIAANSFAGLPSLTVLQVYNNTITSISANAFTGLSALT 326
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 99/223 (44%), Gaps = 5/223 (2%)
Query: 127 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 186
+T S++ L L L +T+ + L L++L LG P+T + +
Sbjct: 70 NITSIPANAFASLTRLTILTLDVNQITSIPATAFTGLSALTLLSLGSNPITSMSASAFTD 129
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGA 246
LTKL L L + +++ A F LS L + T++ +IS+ +L +Q++
Sbjct: 130 LTKLTQLSLDNTPITSISA---NAFAGLSALTQMFLYQTQITSISASAFADLRSLQKLYL 186
Query: 247 ETDLVLSLTA--LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQ 304
+ + S++A L L L+L Q++ + + L L L ++ ++ +
Sbjct: 187 YGNRITSISANAFTGLTKLAYLDLSYNQITSISANAFADLSSLTDLRLYFNQMSSLAANT 246
Query: 305 LSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLT 347
+ LS LT LS+ + +T +F +LKLL LH + T
Sbjct: 247 FTGLSALTQLSLLNNQITAISANAFTGLNALKLLYLHNNLITT 289
>gi|222095062|ref|YP_002529122.1| internalin [Bacillus cereus Q1]
gi|375283399|ref|YP_005103837.1| internalin [Bacillus cereus NC7401]
gi|221239120|gb|ACM11830.1| internalin [Bacillus cereus Q1]
gi|358351925|dbj|BAL17097.1| internalin [Bacillus cereus NC7401]
Length = 761
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 131/280 (46%), Gaps = 26/280 (9%)
Query: 41 LADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRY---LRSLNV 97
+ D+ LR L+ +++ L E ++++ E + Y A +Y L+SL V
Sbjct: 186 ITDNKLRELVNKKVFNRKDLNTPITKEELLQVKDLFLNTNEILDY-SALKYMPNLKSLTV 244
Query: 98 ADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGI 157
A+ + S T + LK L L R + +D + L+ + L+ L LS +T +
Sbjct: 245 ANAKIKDPSFF---TSLKQLKHLAL-RGNEFSD--VTPLVKMDNLDSLDLSNNKIT--NV 296
Query: 158 ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 217
A L ++N+ L L G + D+ +L + +L+YL+L ++++N A L +++L
Sbjct: 297 APLIEMKNVKSLYLSGNQIEDVT--ALAKMEQLDYLNLANNKITN--VAPLSALKNVTYL 352
Query: 218 NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDAT 277
LA + + + SL +L + + V L+ ++ + LE L + + ++ D T
Sbjct: 353 TLAGNQIEDIKPLYSLPLKDLVLTR------NKVKDLSGIEQMKQLEELWIGKNEIKDVT 406
Query: 278 LFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 317
PLS +L L L N L D++ LSSL L L +
Sbjct: 407 --PLSKMTQLKQLHLPNNELKDIT--PLSSLVNLQKLDLE 442
>gi|242004626|ref|XP_002423181.1| F-box/LRR-repeat protein, putative [Pediculus humanus corporis]
gi|212506146|gb|EEB10443.1| F-box/LRR-repeat protein, putative [Pediculus humanus corporis]
Length = 497
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Query: 92 LRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET 150
LRSL+++ C R+T +AL + + L+EL L RC+ +TD G+ ++ ++ +L L+L
Sbjct: 366 LRSLDLSWCPRITDAALECIACDLNQLEELTLDRCIHITDLGIGYISTMLSLSALYLRWC 425
Query: 151 GLTAD-GIALLSSLQNLSVLDLGGLP 175
L D G+ L ++NL +L L G P
Sbjct: 426 TLVKDFGLQHLCGMRNLQILSLAGCP 451
Score = 41.6 bits (96), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 109/270 (40%), Gaps = 57/270 (21%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLK----ELDLS 123
+I LR + D A L + L L +A C +T + LWA CL L L+
Sbjct: 214 HSISLRCSSVSDRGLEALLDHLQALFELELAGCNEITEAGLWA-----CLTPRIVALTLT 268
Query: 124 RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVL-- 181
C+ + D M G A LL SL S L V+D L
Sbjct: 269 DCINIADEAM-----------------GAVAQ---LLPSLYEFS---LQAYHVSDAALGY 305
Query: 182 ---RSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLNLAWTGVTKLP--------- 228
+ L+ L W +V+N G ++ P L+ L+L +G +K+
Sbjct: 306 FSPKQSNSLSILRLHSCW--EVTNHGMDNIVHSLPNLTVLSL--SGCSKITDEGVEAIAE 361
Query: 229 NISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPLSTFKEL 287
N+ L L+LS+ ++ TD L A +LN LE L L++ ++D + +ST L
Sbjct: 362 NLHKLRSLDLSWCPRI---TDAALECIAC-DLNQLEELTLDRCIHITDLGIGYISTMLSL 417
Query: 288 IHLSLRNASLT-DVSLHQLSSLSKLTNLSI 316
L LR +L D L L + L LS+
Sbjct: 418 SALYLRWCTLVKDFGLQHLCGMRNLQILSL 447
>gi|149178815|ref|ZP_01857396.1| serine/threonine protein kinase [Planctomyces maris DSM 8797]
gi|148842356|gb|EDL56738.1| serine/threonine protein kinase [Planctomyces maris DSM 8797]
Length = 1189
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 75/149 (50%), Gaps = 5/149 (3%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
FR L + + + ++VT + L AL G L+ ++L+ + TDAG+ HL L++L L
Sbjct: 545 FR-LTHVELINMKKVTDTGLAALRGTKNLRFVNLAYSPEFTDAGLAHLSDNRGLQRLDLW 603
Query: 149 ETGLTADGIALLSSLQNLSVLDLGG--LPVTDL-VLRSLQVLTKLEYLDLWGSQVSNRGA 205
T +T G+ + +L L LG L DL +L+ L KLE L L +Q +
Sbjct: 604 GTNITKQGLEYFTDFPDLRDLRLGDTQLSAEDLSILKRYASLQKLELLMLSLTQADDSTL 663
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLE 234
A+L +L LNL T + + + SLE
Sbjct: 664 AILSGASQLGQLNLEQTNINDV-GLESLE 691
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 75/164 (45%), Gaps = 15/164 (9%)
Query: 152 LTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKM 210
+T G+A L +NL ++L P TD L L L+ LDLWG+ ++ +G
Sbjct: 558 VTDTGLAALRGTKNLRFVNLAYSPEFTDAGLAHLSDNRGLQRLDLWGTNITKQGLEYFTD 617
Query: 211 FPRLSFLNLAWTGVT--------KLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNH 262
FP L L L T ++ + ++ LE L LS Q + +L L +
Sbjct: 618 FPDLRDLRLGDTQLSAEDLSILKRYASLQKLELLMLSLTQADDS------TLAILSGASQ 671
Query: 263 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLS 306
L +LNLEQT ++D L L + L +L L +T + +L+
Sbjct: 672 LGQLNLEQTNINDVGLESLEQNRNLRNLYLNKTPVTTEGIRRLA 715
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 73/159 (45%), Gaps = 4/159 (2%)
Query: 70 IELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVT 129
+EL V +A L + LR +N+A T + L L+ L+ LDL +T
Sbjct: 550 VELINMKKVTDTGLAALRGTKNLRFVNLAYSPEFTDAGLAHLSDNRGLQRLDL-WGTNIT 608
Query: 130 DAGMKHLLSISTLEKLWLSETGLTADGIALL---SSLQNLSVLDLGGLPVTDLVLRSLQV 186
G+++ L L L +T L+A+ +++L +SLQ L +L L D L L
Sbjct: 609 KQGLEYFTDFPDLRDLRLGDTQLSAEDLSILKRYASLQKLELLMLSLTQADDSTLAILSG 668
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 225
++L L+L + +++ G L+ L L L T VT
Sbjct: 669 ASQLGQLNLEQTNINDVGLESLEQNRNLRNLYLNKTPVT 707
>gi|56797881|emb|CAH04902.1| internalin A [Listeria monocytogenes]
Length = 773
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 119/222 (53%), Gaps = 19/222 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L ++++LE+L +S
Sbjct: 134 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTSLERLDISS 189
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +L L+ L L G+Q+ + G L
Sbjct: 190 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILANLDELSLNGNQLKDIG--TLA 243
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE 269
L+ L+LA ++ L +S L L ++GA + + +++ L L L L L
Sbjct: 244 SLTNLTDLDLANDQISNLAPLSGLTKLTE---LKLGA--NQISNISPLAGLTALTNLELN 298
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 299 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 336
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 108 ITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTNLQQLS 165
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N++SLE L++S ++ V ++ L L +LE L Q+SD
Sbjct: 166 FGNQV-TDLKPLANLTSLERLDIS--------SNKVSDISVLAKLTNLESLIATNNQISD 216
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 217 IT--PLGILANLDELSLNGNQLKDIG--TLASLTNLTDLDLANDQISN 260
>gi|290981696|ref|XP_002673566.1| LRR_RI domain-containing protein [Naegleria gruberi]
gi|284087150|gb|EFC40822.1| LRR_RI domain-containing protein [Naegleria gruberi]
Length = 411
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 111/269 (41%), Gaps = 34/269 (12%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNV-ADCRRVTSSALWALTGMTCLKELDLSR---------- 124
N++D E Y+ L LN+ +C + + ++ M L LD+S+
Sbjct: 149 NNIDKEGAKYISQLSQLTKLNISGNCYCIGTEGAKHISSMKQLTYLDISKNEIGDEGAKS 208
Query: 125 -------------CVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDL 171
+ D G KH+ ++ L +L +S + +G+ +SS++ L+ L +
Sbjct: 209 ISELKQLTSLYILTNNIGDEGAKHISGMNQLTELDISFNLIGIEGVRHISSMKQLTSLSI 268
Query: 172 GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT--GVTKLPN 229
+ D + L +++L L+++ + + GA + +L FL + + G N
Sbjct: 269 NNAKIGDGA-KYLGAMSQLTNLNIFSCNIESNGAKQISALQQLKFLGIGYNQLGHEGAKN 327
Query: 230 ISSLECLNLSFI--QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 287
IS ++ L+ +I +G + + L LN+ + + D +S K L
Sbjct: 328 ISEMKQLDSLYICGNDIGER-----GAKHISGMKRLTTLNICENNIGDNGAKFISQSKSL 382
Query: 288 IHLSLRNASLTDVSLHQLSSLSKLTNLSI 316
LS+ + ++ V L + +L L I
Sbjct: 383 TILSIYSNDISQVGEKFLQRMKQLERLDI 411
>gi|217958905|ref|YP_002337453.1| putative internalin [Bacillus cereus AH187]
gi|423354088|ref|ZP_17331714.1| hypothetical protein IAU_02163 [Bacillus cereus IS075]
gi|423569655|ref|ZP_17545901.1| hypothetical protein II7_02877 [Bacillus cereus MSX-A12]
gi|217066693|gb|ACJ80943.1| putative internalin [Bacillus cereus AH187]
gi|401087798|gb|EJP95998.1| hypothetical protein IAU_02163 [Bacillus cereus IS075]
gi|401205874|gb|EJR12672.1| hypothetical protein II7_02877 [Bacillus cereus MSX-A12]
Length = 766
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 131/280 (46%), Gaps = 26/280 (9%)
Query: 41 LADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRY---LRSLNV 97
+ D+ LR L+ +++ L E ++++ E + Y A +Y L+SL V
Sbjct: 191 ITDNKLRELVNKKVFNRKDLNTPITKEELLQVKDLFLNTNEILDY-SALKYMPNLKSLTV 249
Query: 98 ADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGI 157
A+ + S T + LK L L R + +D + L+ + L+ L LS +T +
Sbjct: 250 ANAKIKDPSFF---TSLKQLKHLAL-RGNEFSD--VTPLVKMDNLDSLDLSNNKIT--NV 301
Query: 158 ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 217
A L ++N+ L L G + D+ +L + +L+YL+L ++++N A L +++L
Sbjct: 302 APLIEMKNVKSLYLSGNQIEDVT--ALAKMEQLDYLNLANNKITN--VAPLSALKNVTYL 357
Query: 218 NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDAT 277
LA + + + SL +L + + V L+ ++ + LE L + + ++ D T
Sbjct: 358 TLAGNQIEDIKPLYSLPLKDLVLTR------NKVKDLSGIEQMKQLEELWIGKNEIKDVT 411
Query: 278 LFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 317
PLS +L L L N L D++ LSSL L L +
Sbjct: 412 --PLSKMTQLKQLHLPNNELKDIT--PLSSLVNLQKLDLE 447
>gi|297721063|ref|NP_001172894.1| Os02g0274200 [Oryza sativa Japonica Group]
gi|255670791|dbj|BAH91623.1| Os02g0274200 [Oryza sativa Japonica Group]
Length = 910
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 104/232 (44%), Gaps = 25/232 (10%)
Query: 82 WMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIST 141
W + LR L ++DC + + A +T L++LDLS V T + + T
Sbjct: 212 WAGVVSNLPSLRVLALSDCGLTAAPSPPARANLTRLQKLDLSTNVINTSSANSWFWDVPT 271
Query: 142 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVS 201
L L LS L+ L ++ NL VL+L G + ++ +LQ L L+ +DL + V+
Sbjct: 272 LTYLDLSGNALSGVFPDALGNMTNLRVLNLQGNDMVGMIPATLQRLCGLQVVDLTVNSVN 331
Query: 202 NRGAAVLKMFPR----------LSFLNLA-----WTGVTKLPNISSLECLNLSFIQQVGA 246
A ++ PR LS +N++ W G +S L L+LSF + G
Sbjct: 332 GDMAEFMRRLPRCVFGKLQVLQLSAVNMSGHLPKWIG-----EMSELTILDLSFNKLSG- 385
Query: 247 ETDLVLSLTALQNLNHLE-RLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 297
++ L + +L NL L NL +S+ L + E I LSL N S+
Sbjct: 386 --EIPLGIGSLSNLTRLFLHNNLLNGSLSEEHFADLVSL-EWIDLSLNNLSM 434
>gi|87310922|ref|ZP_01093048.1| serine/threonine protein kinase [Blastopirellula marina DSM 3645]
gi|87286437|gb|EAQ78345.1| serine/threonine protein kinase [Blastopirellula marina DSM 3645]
Length = 897
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 67/121 (55%), Gaps = 3/121 (2%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
V L LTG++ L+ L L +++DAG+ + ++ ++ L + +T +T GIA L++
Sbjct: 763 VQDEDLALLTGLSKLQHLHLYD-TRISDAGLAQIGKLTKMKILSIDKTEITDKGIAHLTT 821
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT 222
L +L VL+ +TD+ + L L +L+ L + G+Q++ + A+ K+ L + W
Sbjct: 822 LHDLEVLNASNTNLTDVSVNHLAQLPRLQRLQVQGTQITRQ--AIEKLHAALPDCVITWN 879
Query: 223 G 223
G
Sbjct: 880 G 880
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 12/162 (7%)
Query: 184 LQVLTKLEYLD--LWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLP----NISSLECLN 237
LQ+ + +L GS+ ++ + L L + +T P ++S L ++
Sbjct: 674 LQIFAETTHLTELALGSEFTDAALQNFRHNKNLKTLYFLHSQITGAPLHDFDLSQLTHVD 733
Query: 238 LSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 297
+ + Q G ++ LQN L L+L T V D L L+ +L HL L + +
Sbjct: 734 VRYSQFDGG------NVIVLQNSPELIELHLTNTNVQDEDLALLTGLSKLQHLHLYDTRI 787
Query: 298 TDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 339
+D L Q+ L+K+ LSI +T+ G+ L++L+
Sbjct: 788 SDAGLAQIGKLTKMKILSIDKTEITDKGIAHLTTLHDLEVLN 829
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Query: 259 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 318
+L+ L +++ +Q + L ELI L L N ++ D L L+ LSKL +L + D
Sbjct: 725 DLSQLTHVDVRYSQFDGGNVIVLQNSPELIELHLTNTNVQDEDLALLTGLSKLQHLHLYD 784
Query: 319 AVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMH 358
++++GL +K+L + +T+ I +H
Sbjct: 785 TRISDAGLAQIGKLTKMKILSIDKTE-ITDKGIAHLTTLH 823
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 176
L EL L+ V D + L +S L+ L L +T ++ G+A + L + +L + +
Sbjct: 753 LIELHLTN-TNVQDEDLALLTGLSKLQHLHLYDTRISDAGLAQIGKLTKMKILSIDKTEI 811
Query: 177 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK 226
TD + L L LE L+ + +++ L PRL L + T +T+
Sbjct: 812 TDKGIAHLTTLHDLEVLNASNTNLTDVSVNHLAQLPRLQRLQVQGTQITR 861
>gi|326201424|ref|ZP_08191295.1| Dockerin type 1 [Clostridium papyrosolvens DSM 2782]
gi|325988024|gb|EGD48849.1| Dockerin type 1 [Clostridium papyrosolvens DSM 2782]
Length = 1098
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 110/213 (51%), Gaps = 15/213 (7%)
Query: 111 LTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLD 170
LTG+ CL L + K + + L +++L+ L L ++ ++ I L+ L NL LD
Sbjct: 77 LTGIECLTNLTMLSLSKNKISDVTPLAGLTSLKYLALYQSNIS--NINALAGLINLEYLD 134
Query: 171 LGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNI 230
LG V+D + +L+ +TKL YL+L + +++ A L L +L L G ++ +I
Sbjct: 135 LGMNSVSD--ISALKNMTKLTYLELSWNNITDISA--LSKLTNLQYLQL---GCNRIVDI 187
Query: 231 SSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 290
S + NL+ ++ + + + ++ L L L L+L VS+ + PL+ L +L
Sbjct: 188 SPIS--NLTKLKTLHLFYNRISDISGLSGLKTLTYLHLNSNNVSN--INPLNGLTMLSYL 243
Query: 291 SLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
L +TD+S L+ L+K+T+L + +TN
Sbjct: 244 DLGFNKITDIS--ALNKLTKITDLDLSYNKITN 274
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 90/197 (45%), Gaps = 22/197 (11%)
Query: 79 DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLS 138
D +A L + +YL + S + AL G+ L+ LDL + +K++
Sbjct: 98 DVTPLAGLTSLKYLA------LYQSNISNINALAGLINLEYLDLGMNSVSDISALKNMTK 151
Query: 139 ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
++ LE W + T ++A LS L NL L LG + D+ + LTKL+ L L+ +
Sbjct: 152 LTYLELSWNNITDISA-----LSKLTNLQYLQLGCNRIVDI--SPISNLTKLKTLHLFYN 204
Query: 199 QVSN-RGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSF--------IQQVGAETD 249
++S+ G + LK L + + + L ++ L L+L F + ++ TD
Sbjct: 205 RISDISGLSGLKTLTYLHLNSNNVSNINPLNGLTMLSYLDLGFNKITDISALNKLTKITD 264
Query: 250 LVLSLTALQNLNHLERL 266
L LS + N+N L L
Sbjct: 265 LDLSYNKITNINVLSNL 281
>gi|387817978|ref|YP_005678323.1| hypothetical protein H04402_01777 [Clostridium botulinum H04402
065]
gi|322806020|emb|CBZ03587.1| internalin-like protein (LPXTG motif) Lmo0333 homolog [Clostridium
botulinum H04402 065]
Length = 1355
Score = 52.8 bits (125), Expect = 3e-04, Method: Composition-based stats.
Identities = 60/256 (23%), Positives = 123/256 (48%), Gaps = 30/256 (11%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
++++ + L L++A+ V L L L++LD++ C ++ + H+ I
Sbjct: 504 ISFVSSLEKLEYLSIANTDVVNIDVLKNLIN---LRKLDITGCAQINTQVLNHVEIIGN- 559
Query: 143 EKLWLSETGLTADGIALLSS---------LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
E + + L + L+++ L +++ L+L G + DL + L+ + L YL
Sbjct: 560 EIVNFGDKVLEREIRELINNYSEPIYKRQLSSITKLELSGRGIVDL--QGLESMENLTYL 617
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLS 253
DL +++SN + +L L K+ +I S+E +L +++++ +L+
Sbjct: 618 DLSNNEISN-----IDSIKKLVNLKKLVLHKNKIGSIKSIE--SLKYLEELDLSNNLIGD 670
Query: 254 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 313
+TAL L+ L RL+L + + ++ L + L +LSL +++ + L KL
Sbjct: 671 ITALGGLSQLTRLDLSKNGI--VSINSLGSLINLQYLSLYENKISEGEEY----LKKL-- 722
Query: 314 LSIRDAVLTNSGLGSF 329
S+R+ L NSG+ +F
Sbjct: 723 YSLRELYLKNSGVSNF 738
Score = 46.6 bits (109), Expect = 0.028, Method: Composition-based stats.
Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 16/171 (9%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N +I LRG + E + L R L L++ R + ++L+ + +T L+ L L+
Sbjct: 829 NLHSINLRGHGKL--EGLENLMPIRGLIKLDLQG-REINYTSLYYIKYLTSLRYLYLNNM 885
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
D + L +++ L L LS TG++ I++L L+NLS L LGG + D L SL+
Sbjct: 886 NLTGD--LSFLENLTDLRVLDLSRTGIS--NISILDKLRNLSELYLGGNNIID--LSSLE 939
Query: 186 VLTKLEYLDLWGSQVSNRGAA---VLKMFPRLSFLNLAWTGVTKLPNISSL 233
LT L LDL V N L+ L +L L T K+ + S++
Sbjct: 940 NLTNLAKLDL----VENNDITSIYALRNLINLRYLTLPITNPKKIQDYSAV 986
Score = 40.0 bits (92), Expect = 2.1, Method: Composition-based stats.
Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 24/186 (12%)
Query: 139 ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWG 197
+ T+ L LSE ++ I+ S L N +V++L G+ ++L +L+ KLE L+
Sbjct: 791 VDTITDLNLSEEAISRLNIS--SRLTNTNVINLDGIQNFSNLHSINLRGHGKLEGLE--- 845
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTAL 257
+ + RG L + R + +T + + ++SL L L+ + G L+ L
Sbjct: 846 NLMPIRGLIKLDLQGR----EINYTSLYYIKYLTSLRYLYLNNMNLTG-------DLSFL 894
Query: 258 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 317
+NL L L+L +T +S+ ++ L + L L L ++ D LSSL LTNL+
Sbjct: 895 ENLTDLRVLDLSRTGISNISI--LDKLRNLSELYLGGNNIID-----LSSLENLTNLAKL 947
Query: 318 DAVLTN 323
D V N
Sbjct: 948 DLVENN 953
>gi|384251251|gb|EIE24729.1| RNI-like protein [Coccomyxa subellipsoidea C-169]
Length = 498
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 107/232 (46%), Gaps = 41/232 (17%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGM----KHLLSISTLEKLWLSETGLTADGIA 158
+T + L +L GMT L LDLS ++DA M +HL + L+
Sbjct: 207 ITHAGLRSLCGMTQLTALDLSGHAAISDASMAEIARHLTRLIDLD--------------- 251
Query: 159 LLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN 218
L+ + + G VTD + +L LT LE + L +QV G A L PRL L
Sbjct: 252 ----LRRPACDNPGAAVVTDAGIAALASLTLLESVRLSQAQVGQAGCAALASLPRLRCLE 307
Query: 219 LAW------TGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTAL-QNLNHLERLNLE-- 269
L++ T V +L + L L+L+ V TD +++TAL + + L RL+L
Sbjct: 308 LSYCDSLSDTPVCELTRLRHLSELSLAGCASV---TD--IAVTALVRGMPELMRLDLSAC 362
Query: 270 QTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSS---LSKLTNLSIR 317
V D +L+ ++T L L L + ++D+ + L S + LT+L +R
Sbjct: 363 HMHVGDISLYAIATLPNLQVLRLHSCERVSDMGIGGLCSGAAAAALTHLDVR 414
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 78/166 (46%), Gaps = 9/166 (5%)
Query: 69 AIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALT-GMTCLKELDLSRC-V 126
+EL +S+ + L R+L L++A C VT A+ AL GM L LDLS C +
Sbjct: 305 CLELSYCDSLSDTPVCELTRLRHLSELSLAGCASVTDIAVTALVRGMPELMRLDLSACHM 364
Query: 127 KVTDAGMKHLLSISTLEKLWLSETGLTAD-GIALLSS---LQNLSVLDLGGLP-VTDLVL 181
V D + + ++ L+ L L +D GI L S L+ LD+ G ++D
Sbjct: 365 HVGDISLYAIATLPNLQVLRLHSCERVSDMGIGGLCSGAAAAALTHLDVRGCERISDAGA 424
Query: 182 RSL-QVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFLNLAWTGVT 225
S+ + L +L+YL L + +RG L P L L + TG T
Sbjct: 425 TSIGRCLKQLQYLSLEHCHLIGDRGIRTLSGLPHLEILRVGGTGAT 470
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 19/204 (9%)
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQV 186
VTDAG+ L S++ LE + LS+ + G A L+SL L L+L ++D + L
Sbjct: 265 VTDAGIAALASLTLLESVRLSQAQVGQAGCAALASLPRLRCLELSYCDSLSDTPVCELTR 324
Query: 187 LTKLEYLDLWG-SQVSNRGA-AVLKMFPRLSFLNLAWT----------GVTKLPNISSLE 234
L L L L G + V++ A+++ P L L+L+ + LPN+ L
Sbjct: 325 LRHLSELSLAGCASVTDIAVTALVRGMPELMRLDLSACHMHVGDISLYAIATLPNLQVLR 384
Query: 235 CLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS-TFKELIHLSLR 293
+ + +G + S A L HL+ E ++SDA + K+L +LSL
Sbjct: 385 LHSCERVSDMGIGG--LCSGAAAAALTHLDVRGCE--RISDAGATSIGRCLKQLQYLSLE 440
Query: 294 NASLT-DVSLHQLSSLSKLTNLSI 316
+ L D + LS L L L +
Sbjct: 441 HCHLIGDRGIRTLSGLPHLEILRV 464
>gi|229138115|ref|ZP_04266713.1| Internalin [Bacillus cereus BDRD-ST26]
gi|228645460|gb|EEL01694.1| Internalin [Bacillus cereus BDRD-ST26]
Length = 772
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 131/280 (46%), Gaps = 26/280 (9%)
Query: 41 LADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRY---LRSLNV 97
+ D+ LR L+ +++ L E ++++ E + Y A +Y L+SL V
Sbjct: 197 ITDNKLRELVNKKVFNRKDLNTPITKEELLQVKDLFLNTNEILDY-SALKYMPNLKSLTV 255
Query: 98 ADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGI 157
A+ + S T + LK L L R + +D + L+ + L+ L LS +T +
Sbjct: 256 ANAKIKDPSFF---TSLKQLKHLAL-RGNEFSD--VTPLVKMDNLDSLDLSNNKIT--NV 307
Query: 158 ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 217
A L ++N+ L L G + D+ +L + +L+YL+L ++++N A L +++L
Sbjct: 308 APLIEMKNVKSLYLSGNQIEDVT--ALAKMEQLDYLNLANNKITN--VAPLSALKNVTYL 363
Query: 218 NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDAT 277
LA + + + SL +L + + V L+ ++ + LE L + + ++ D T
Sbjct: 364 TLAGNQIEDIKPLYSLPLKDLVLTR------NKVKDLSGIEQMKQLEELWIGKNEIKDVT 417
Query: 278 LFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 317
PLS +L L L N L D++ LSSL L L +
Sbjct: 418 --PLSKMTQLKQLHLPNNELKDIT--PLSSLVNLQKLDLE 453
>gi|72390718|ref|XP_845653.1| leucine-rich repeat protein (LRRP) [Trypanosoma brucei TREU927]
gi|62176795|gb|AAX70893.1| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei]
gi|70802189|gb|AAZ12094.1| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 537
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 111/268 (41%), Gaps = 34/268 (12%)
Query: 80 AEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSI 139
+ LG YL++L++ + V AL+ L L EL L C ++TD + HL I
Sbjct: 214 VKGFGELGRVPYLQTLSLNE-TNVDDRALFTLRATGSLVELSLESCPQLTD--VTHLSMI 270
Query: 140 STLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQ 199
TL+K+ L A G+ LL L L L G + D + +L L +D+ Q
Sbjct: 271 DTLQKIVLEGCANVAKGVGLLGRLPALRELYAGATSIADTSISALSRSGTLTKIDVKFCQ 330
Query: 200 VSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQN 259
T V+ L ++ LE +NL + V L L+
Sbjct: 331 --------------------GLTDVSPLVDMKLLEEINLEGCKNVEH------GLPCLEK 364
Query: 260 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD--VSLHQLSSLSKLTNLSIR 317
LN L L+L +TQ++D L L ++ L + SL D V + L+S+ L L
Sbjct: 365 LNLLRVLHLTETQMTDDYLRGLCASCSIVVL---DVSLCDQLVDMSPLASIETLEVLRAN 421
Query: 318 DAVLTNSGLGSFKPPRSLKLLDLHGGWL 345
+ G+G+ R+L+ L L +
Sbjct: 422 NCKSVVRGVGALGGLRALRELGLKATMI 449
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 100/271 (36%), Gaps = 50/271 (18%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
VT L + CL L + C +TD + L ++ TLE++ L GI
Sbjct: 23 VTDRHLCNVGVGKCLVRLSIESCTNLTDVSL--LTAVETLEEVRLDGCKNVVKGINEFGR 80
Query: 163 LQNLSVLDLGGLPVTDLVLRS-----------------------LQVLTKLEYLDLWGSQ 199
+ L VL L VTD LR + + LE + L G +
Sbjct: 81 MPYLRVLILKETSVTDRCLRGFASSRSLVKLFIESCSQPTDVSPISAVETLEEVRLDGCK 140
Query: 200 VSNRGAAVLKMFPRLSFLNLAWTGVT-----------KLPNISSLECLNLSFIQQVGA-E 247
+G P L L L GVT L ++ CL L+ + + E
Sbjct: 141 NVVKGINEFGRMPYLRVLILREVGVTDRCLRGLSCCRSLVELALEYCLQLTDVSPISMLE 200
Query: 248 T----------DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-S 296
T ++V L + +L+ L+L +T V D LF L L+ LSL +
Sbjct: 201 TLQKVRFDGCKNVVKGFGELGRVPYLQTLSLNETNVDDRALFTLRATGSLVELSLESCPQ 260
Query: 297 LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLG 327
LTDV+ LS + L + + G+G
Sbjct: 261 LTDVT--HLSMIDTLQKIVLEGCANVAKGVG 289
>gi|422421355|ref|ZP_16498308.1| internalin A, partial [Listeria seeligeri FSL S4-171]
gi|313638974|gb|EFS03990.1| internalin A [Listeria seeligeri FSL S4-171]
Length = 493
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 118/274 (43%), Gaps = 36/274 (13%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
L S+ +C S++ L M L +D + C VTD + L +++ L + E G
Sbjct: 74 LDSITELECTSAGISSISGLEYMENLTGIDFTYC-SVTD--LTPLTNLTKLTYVDFDENG 130
Query: 152 LTADGIALLSSLQNLSVLDLGGLPVTDLV-LRSLQVLTKLEYLDLWGSQVSNRGAAVLKM 210
+ + L+ L NL L+LG +V + SL LT L+ LDL G+ + + A
Sbjct: 131 NIVN-LEPLAGLTNLETLNLGAFEGNSVVDISSLANLTNLKALDLEGNNIVDVSA----- 184
Query: 211 FPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 270
++ L N+ SL+ N + + ++AL +L +L L L
Sbjct: 185 -------------LSGLTNLESLDIYN-----------NEISDISALSSLTNLNSLFLGA 220
Query: 271 TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 330
+SD T PL++ + L L R L + L ++SLS L L ++D +T+ +
Sbjct: 221 NTISDLT--PLTSMQNLTILESRGNGLVNKDLEIINSLSSLKTLRMQDNDITDLSFFNTC 278
Query: 331 PPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVW 364
SL ++D G + I+ + H + +
Sbjct: 279 SSTSLNMVDFGGNHISDIRPIMTYRNGHRNLSTY 312
>gi|110738539|dbj|BAF01195.1| putative leucine-rich repeat disease resistance protein
[Arabidopsis thaliana]
Length = 779
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 106/229 (46%), Gaps = 22/229 (9%)
Query: 110 ALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVL 169
+L G+ L+ L+LS + + +++ LE L+LS G + S+L L++L
Sbjct: 63 SLFGLQHLRYLNLSNNNFTSASLPSGFGNLNRLEVLYLSSNGFLGQVPSSFSNLSQLNIL 122
Query: 170 DL------GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL---A 220
DL G P +Q LTKL L L + S + L P LS L+L
Sbjct: 123 DLSHNELTGSFPF-------VQNLTKLSILVLSYNHFSGTIPSSLLTLPFLSSLDLRENY 175
Query: 221 WTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFP 280
TG + PN S+ L ++ E ++ ++ L NL HL+ L+ + D LF
Sbjct: 176 LTGSIEAPNSSTSSMLEFMYLGNNHFEGQILEPISKLINLKHLDLSFLKTSYPIDLNLF- 234
Query: 281 LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 329
S+FK L+ L L SL S ++S SK+ L++ + VL + GL F
Sbjct: 235 -SSFKSLVRLVLSGNSLLATS---ITSDSKIP-LNLENLVLLSCGLIEF 278
>gi|423553594|ref|ZP_17529921.1| hypothetical protein IGW_04225, partial [Bacillus cereus ISP3191]
gi|401183579|gb|EJQ90693.1| hypothetical protein IGW_04225, partial [Bacillus cereus ISP3191]
Length = 909
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 106/223 (47%), Gaps = 31/223 (13%)
Query: 81 EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
++M L AF L NV D ++S LK+L + +K+ ++++ IS
Sbjct: 238 QYMVNLEAFE-LHESNVKDISPISS-----------LKKL---KTMKLYLNPIENIEPIS 282
Query: 141 TLEKL-WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLV-LRSLQVLTKLEYLDLWGS 198
LEKL +L+ + LS L+ + VLDL G +TD+ L S+ +TKL YL
Sbjct: 283 QLEKLQFLTLRDNKISDLTPLSQLKKVKVLDLIGNEITDIKPLFSMDSVTKL-YL----- 336
Query: 199 QVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL-NLSFIQQVGAETDLVLSLTAL 257
SN + L +L L L W G + N++ + L NL ++ AE + LT L
Sbjct: 337 --SNNKISDLTDIEKLDDLRLLWIGNNYIDNLTEISKLKNLVELEVANAE---IRDLTPL 391
Query: 258 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 300
+ L+ L+LEQ +SD + P+S L L+L + D+
Sbjct: 392 AKMQQLQSLDLEQNYISDIS--PISKLNNLYALNLIANEIRDI 432
>gi|301052201|ref|YP_003790412.1| internalin [Bacillus cereus biovar anthracis str. CI]
gi|300374370|gb|ADK03274.1| internalin, putative [Bacillus cereus biovar anthracis str. CI]
Length = 1051
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 106/223 (47%), Gaps = 31/223 (13%)
Query: 81 EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
++M L AF L NV D ++S LK+L + +K+ ++++ IS
Sbjct: 238 QYMVNLEAFE-LHESNVKDISPISS-----------LKKL---KTMKLYLNPIENIEPIS 282
Query: 141 TLEKL-WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLV-LRSLQVLTKLEYLDLWGS 198
LEKL +L+ + LS L+ + VLDL G +TD+ L S+ +TKL YL
Sbjct: 283 QLEKLQFLTLRDNKISDLTPLSQLKKVKVLDLIGNEITDIKPLFSMDSVTKL-YL----- 336
Query: 199 QVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL-NLSFIQQVGAETDLVLSLTAL 257
SN + L +L L L W G + N++ + L NL ++ AE + LT L
Sbjct: 337 --SNNKISDLTDIEKLDDLRLLWIGNNYIDNLTEISKLKNLVELEVANAE---IRDLTPL 391
Query: 258 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 300
+ L+ L+LEQ +SD + P+S L L+L + D+
Sbjct: 392 AKMQQLQSLDLEQNYISDIS--PISKLNNLYALNLIANEIRDI 432
>gi|423606867|ref|ZP_17582760.1| hypothetical protein IIK_03448 [Bacillus cereus VD102]
gi|401241057|gb|EJR47449.1| hypothetical protein IIK_03448 [Bacillus cereus VD102]
Length = 766
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 131/280 (46%), Gaps = 26/280 (9%)
Query: 41 LADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRY---LRSLNV 97
+ D+ LR L+ +++ L E ++++ E + Y A +Y L+SL V
Sbjct: 191 ITDNKLRELVNKKVFNRKDLNTPITKEELLQVKDLFLNTNEILDY-SALKYMPNLKSLTV 249
Query: 98 ADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGI 157
A+ + S T + LK L L R + +D + L+ + L+ L LS +T +
Sbjct: 250 ANAKIKDPSFF---TSLKQLKHLAL-RGNEFSD--VTPLVKMDNLDSLDLSNNKIT--NV 301
Query: 158 ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 217
A L ++N+ L L G + D+ +L + +L+YL+L ++++N A L +++L
Sbjct: 302 APLIEMKNVKSLYLSGNQIEDVT--ALAKMEQLDYLNLANNKITN--VAPLSALKNVTYL 357
Query: 218 NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDAT 277
LA + + + SL +L + + V L+ ++ + LE L + + ++ D T
Sbjct: 358 TLAGNQIEDIKPLYSLPLKDLVLTR------NKVKDLSGIEQMKQLEELWIGKNEIKDVT 411
Query: 278 LFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 317
PLS +L L L N L D++ LSSL L L +
Sbjct: 412 --PLSKMTQLKQLHLPNNELKDIT--PLSSLVNLQKLDLE 447
>gi|297817168|ref|XP_002876467.1| hypothetical protein ARALYDRAFT_486305 [Arabidopsis lyrata subsp.
lyrata]
gi|297322305|gb|EFH52726.1| hypothetical protein ARALYDRAFT_486305 [Arabidopsis lyrata subsp.
lyrata]
Length = 353
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 34/164 (20%)
Query: 90 RYLRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
R++ LN++ C+ +T ++ + L+ LD++RCVK+TD G+ + L+K
Sbjct: 163 RHIIDLNLSGCKSLTDKSMQLVAESYQDLESLDITRCVKITDDGL-----LQVLQK---- 213
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAV 207
SSLQ L++ L G TD + + +L L +LDL G+Q +S+ G
Sbjct: 214 -----------CSSLQTLNLYALSGF--TDKAYKKISLLPDLRFLDLCGAQNLSDEGLGH 260
Query: 208 LKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSFIQQVG 245
+ +L LNL W GV + N C +L F+ G
Sbjct: 261 IAKCNKLESLNLTWCVRITDAGVITIAN----SCTSLEFLSLFG 300
>gi|270010132|gb|EFA06580.1| hypothetical protein TcasGA2_TC009492 [Tribolium castaneum]
Length = 474
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 98/212 (46%), Gaps = 42/212 (19%)
Query: 40 HLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVAD 99
H+ D ++HL PSL E + L+ + E + + L S+N++
Sbjct: 269 HVGDQGIQHLASGN---PSL--------EHLGLQDCQKLSDEALKHATGLTSLISINLSF 317
Query: 100 CRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHL---------LSISTLEK------ 144
C +T S L L MT L+EL+L C ++D GM L L +S +K
Sbjct: 318 CVSITDSGLKHLAKMTNLRELNLRSCDNISDTGMAFLAEGGSRISSLDVSFCDKIGDQAL 377
Query: 145 ------------LWLSETGLTADGIA-LLSSLQNLSVLDLGGLP-VTDLVLRSL-QVLTK 189
L +S L+ +G+A + +SL +L L++G VTD L ++ + L +
Sbjct: 378 VHISQGLFNLRNLLMSACQLSDEGLAKIANSLHDLETLNIGQCSRVTDKGLTTIAESLLR 437
Query: 190 LEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLA 220
L+ +DL+G ++++ G + P+LS LNL
Sbjct: 438 LKCIDLYGCTRITTVGLERIMKLPQLSVLNLG 469
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 97/190 (51%), Gaps = 25/190 (13%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWL---- 147
L L + DC++++ AL TG+T L ++LS CV +TD+G+KHL ++ L +L L
Sbjct: 285 LEHLGLQDCQKLSDEALKHATGLTSLISINLSFCVSITDSGLKHLAKMTNLRELNLRSCD 344
Query: 148 --SETGLT--ADGIALLSSLQNLSVLDLGGLPVTDLVLRSL-QVLTKLEYLDLWGSQVSN 202
S+TG+ A+G + +SSL ++S D + D L + Q L L L + Q+S+
Sbjct: 345 NISDTGMAFLAEGGSRISSL-DVSFCD----KIGDQALVHISQGLFNLRNLLMSACQLSD 399
Query: 203 RG-AAVLKMFPRLSFLNLAWT------GVTKLP-NISSLECLNL---SFIQQVGAETDLV 251
G A + L LN+ G+T + ++ L+C++L + I VG E +
Sbjct: 400 EGLAKIANSLHDLETLNIGQCSRVTDKGLTTIAESLLRLKCIDLYGCTRITTVGLERIMK 459
Query: 252 LSLTALQNLN 261
L ++ NL
Sbjct: 460 LPQLSVLNLG 469
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 124/287 (43%), Gaps = 54/287 (18%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSIS-TLEKLW 146
+ L L + C VT+S L + G+ LK L+L C V D G++HL S + +LE L
Sbjct: 230 LKNLEVLELGGCSNVTNSGLMLIAWGLKKLKRLNLRSCWHVGDQGIQHLASGNPSLEHLG 289
Query: 147 LSET-GLTADGIALLSSLQNLSVLDLG-GLPVTDLVLRSLQVLTKLEYLDLWGS-QVSNR 203
L + L+ + + + L +L ++L + +TD L+ L +T L L+L +S+
Sbjct: 290 LQDCQKLSDEALKHATGLTSLISINLSFCVSITDSGLKHLAKMTNLRELNLRSCDNISDT 349
Query: 204 GAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHL 263
G A LA G S + L++SF ++G + + +S Q L +L
Sbjct: 350 GMAF-----------LAEGG-------SRISSLDVSFCDKIGDQALVHIS----QGLFNL 387
Query: 264 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
L + Q+SD L ++ SLH L +L+ + D LT
Sbjct: 388 RNLLMSACQLSDEGLAKIAN-----------------SLHDLETLNIGQCSRVTDKGLTT 430
Query: 324 SGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEV-----WH 365
+ LK +DL+G +T + + K+ P++ V WH
Sbjct: 431 IAESLLR----LKCIDLYGCTRITTVGLERIMKL-PQLSVLNLGLWH 472
>gi|290995863|ref|XP_002680502.1| predicted protein [Naegleria gruberi]
gi|284094123|gb|EFC47758.1| predicted protein [Naegleria gruberi]
Length = 350
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/306 (20%), Positives = 127/306 (41%), Gaps = 71/306 (23%)
Query: 28 RRQRRSLERLPAHLADSLLRHLIRRRLIFPSL--LEVFKHNAEAIELRGENSVDAEWMAY 85
R Q + LE + + A + + HLI+ R F + L F + + R E + +E
Sbjct: 93 RVQGQFLENIASVKALNAINHLIQYRDAFKLMKGLTTFDISYTYVHDR-EAKIISEMTQ- 150
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM-----KHLLSIS 140
L SLNV++ R+ S + +E++ C+ + + G+ KH+ +
Sbjct: 151 ------LTSLNVSNSIRIKKSIAY-------FREMNNLTCLNIGNNGIGVECAKHVSEMK 197
Query: 141 TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 200
L L + G+ +G +S LQ L+ LD+ + + + + L +L LD++ +++
Sbjct: 198 QLTILHICGNGIKFEGAKFISELQQLTKLDVSSNNIGEQGAKYISQLKQLTNLDIYSNRI 257
Query: 201 SNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNL 260
+GA + +L+ LN+++ +
Sbjct: 258 GAQGAKHISEMKQLTRLNISYNDI------------------------------------ 281
Query: 261 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV 320
N+E + +S K+LI+L++ ++ D +S +++LTNL I +
Sbjct: 282 ------NVEGAKY-------ISEMKQLINLNITKNNIGDEGARHISGMNQLTNLFIGNNN 328
Query: 321 LTNSGL 326
++N+G
Sbjct: 329 ISNAGF 334
>gi|194755888|ref|XP_001960211.1| GF13252 [Drosophila ananassae]
gi|190621509|gb|EDV37033.1| GF13252 [Drosophila ananassae]
Length = 492
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 72/135 (53%), Gaps = 6/135 (4%)
Query: 92 LRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET 150
L L + DC+R++ AL + G+T LK ++LS CV VTD+G+KHL + LE+L L
Sbjct: 354 LEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDSGLKHLARMPKLEQLNLRSC 413
Query: 151 GLTAD-GIALLS-SLQNLSVLDLGGL-PVTDLVLRSL-QVLTKLEYLDLWGSQVSNRGA- 205
+D G+A L+ ++ LD+ ++D L + Q L +L L L Q+++ G
Sbjct: 414 DNISDIGMAYLTEGGSGINSLDVSFCDKISDQALTHIAQGLYRLRSLSLNQCQITDHGML 473
Query: 206 AVLKMFPRLSFLNLA 220
+ K L LN+
Sbjct: 474 KIAKALHELENLNIG 488
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 102/227 (44%), Gaps = 46/227 (20%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSIS------- 140
R L +L + C +T++ L + G+ LK L+L C ++D G+ HL S
Sbjct: 292 LRNLETLELGGCCNITNTGLLLIAWGLKKLKHLNLRSCWHISDQGIGHLAGFSRETAEGN 351
Query: 141 -TLEKLWLSET--------GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLE 191
LE L L + G A G+ L S+ NLS + VTD L+ L + KLE
Sbjct: 352 LQLEYLGLQDCQRLSDEALGHIAQGLTSLKSI-NLSFC----VSVTDSGLKHLARMPKLE 406
Query: 192 YLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDL 250
L+L +S+ G A +L +G+ L++SF ++ +D
Sbjct: 407 QLNLRSCDNISDIGMA---------YLTEGGSGINS---------LDVSFCDKI---SDQ 445
Query: 251 VLSLTALQNLNHLERLNLEQTQVSDATLFPLS-TFKELIHLSLRNAS 296
L+ A Q L L L+L Q Q++D + ++ EL +L++ +A+
Sbjct: 446 ALTHIA-QGLYRLRSLSLNQCQITDHGMLKIAKALHELENLNIGHAA 491
>gi|291243949|ref|XP_002741862.1| PREDICTED: F-box and leucine-rich repeat protein 16-like
[Saccoglossus kowalevskii]
Length = 511
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 15/127 (11%)
Query: 64 KHNAEAIELRGEN-----SVDAEWMAYL--GAFRY-------LRSLNVADCRRVTSSALW 109
K + +EL EN S+D W + + Y L L + C R+T + +
Sbjct: 364 KITDDGVELIAENMHMLKSLDLSWCPRITDASLEYIACDLPKLEELILDRCVRITDTGMG 423
Query: 110 ALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSV 168
L+ M+C+K L L C +V D G++HL S+ TL L L+ LT+ G++ L L+NL
Sbjct: 424 FLSTMSCMKTLYLRWCCQVQDFGLQHLYSMRTLHVLSLAGCPLLTSAGLSGLVQLRNLEE 483
Query: 169 LDLGGLP 175
L+L P
Sbjct: 484 LELTNCP 490
>gi|290993170|ref|XP_002679206.1| leucine rich repeat protein [Naegleria gruberi]
gi|284092822|gb|EFC46462.1| leucine rich repeat protein [Naegleria gruberi]
Length = 527
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 82/385 (21%), Positives = 151/385 (39%), Gaps = 71/385 (18%)
Query: 8 ELVRLCIEAACQSGESVQKWRRQRRSLERLPAH---LADSLLRHLIRRRLIFPSLLEVFK 64
+L RL I+A+ E V ++ + + L L H ++D +++L R L + L +F
Sbjct: 122 QLTRLTIDASHIRDEGV-RYISELKQLAYLSVHSNDISDDGVKYL--RELKQLTTLIIFS 178
Query: 65 HNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWAL--TGMTCLKELD- 121
N V +E + + L SL + D A + G C+ EL
Sbjct: 179 -----------NRVGSEGCKCISELKQLTSLCIDDNHINDEGANNRVGSEGCKCISELKQ 227
Query: 122 -LSRCVK---VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVT 177
S C+ + D G K+L ++ L L +S GL +G +S+L L L++ +
Sbjct: 228 LTSLCIDDNHINDEGAKYLSELAQLTYLDISSNGLGNEGTKYISTLNQLEKLNISQNYIG 287
Query: 178 DLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT--------------- 222
D L L++L L+L +++ GA L +L+ L++ +
Sbjct: 288 DEGLEYFGKLSQLTSLELSNNKIGTEGAKYLSELKQLTQLDIEYNKIGDKGAMYFGELKQ 347
Query: 223 --------------GVTKLPNISSLECLNLS----------FIQQVGAETDLVLSLTALQ 258
GV + + L L++S +I ++ TD+ +S +
Sbjct: 348 LVNLIINNNRIGNDGVKYIGELKQLIYLDISENRIGNEGIKYIGELKQLTDVNISENRIG 407
Query: 259 N--------LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 310
N L+ L L L + + +S KELI+L + N + + +S + +
Sbjct: 408 NEGAKYIGQLSQLTSLYLSNNNIGNEGAKYISELKELIYLYMNNNKIRNEGAKYISEMKQ 467
Query: 311 LTNLSIRDAVLTNSGLGSFKPPRSL 335
+T L I + + G+ + L
Sbjct: 468 VTQLDIGNNYIGEEGIKYISEMKQL 492
>gi|87308228|ref|ZP_01090370.1| hypothetical protein DSM3645_21562 [Blastopirellula marina DSM
3645]
gi|87289310|gb|EAQ81202.1| hypothetical protein DSM3645_21562 [Blastopirellula marina DSM
3645]
Length = 438
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 74/155 (47%), Gaps = 4/155 (2%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
++ LNV + + L + L+ELDL+ K+TD G+ +L +S LE L LSET
Sbjct: 262 IQKLNVGQTG-IGNQFLSTIGDFPNLRELDLTGS-KITDGGLAYLSELSQLESLTLSETN 319
Query: 152 LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF 211
+++ S LQ+L L L + + + L LE++DL S V L+
Sbjct: 320 ISSAAAKHFSQLQSLRELHLHNTKLDGQAMVDIAKLKNLEWIDLSKSNVQGEQLLELRKL 379
Query: 212 PRLSFLNLAWT--GVTKLPNISSLECLNLSFIQQV 244
P+L + L T G LP + L ++ ++++
Sbjct: 380 PKLRGVVLMNTPIGAADLPYLKQLYHIDEIYVEET 414
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 113/238 (47%), Gaps = 27/238 (11%)
Query: 130 DAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK 189
D G++ + ++S L+ L +++T ++D L L+ L ++ L + V+ L+ L
Sbjct: 104 DKGIRVVTTLSPLKALLIAKTKASSDSFFGLEELRKLEQVEFTDLVINQAVIGGLRGLPN 163
Query: 190 LEYLDLWGSQVSNRGAAVLKMFPRLSFL-------NLAWTG-VTKLPNISSLE--C---- 235
L ++ S+++ A + FP+L L + A G V +P + L+ C
Sbjct: 164 LNQFNIRNSELALPWALDERSFPQLKTLLIDGGKADAALIGEVCSIPTLQQLQLSCPVGQ 223
Query: 236 LNLSFIQQVGAETDLV-LSLT-----------ALQNLNHLERLNLEQTQVSDATLFPLST 283
++ +++ +LV LSL A Q L +++LN+ QT + + L +
Sbjct: 224 FTINDFRRLADLPNLVDLSLVRSSLPDESCPLATQQLK-IQKLNVGQTGIGNQFLSTIGD 282
Query: 284 FKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 341
F L L L + +TD L LS LS+L +L++ + ++++ F +SL+ L LH
Sbjct: 283 FPNLRELDLTGSKITDGGLAYLSELSQLESLTLSETNISSAAAKHFSQLQSLRELHLH 340
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 5/156 (3%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G+ + ++++ +G F LR L++ + +T L L+ ++ L+ L LS ++ A
Sbjct: 268 GQTGIGNQFLSTIGDFPNLRELDLTGSK-ITDGGLAYLSELSQLESLTLSE-TNISSAAA 325
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
KH + +L +L L T L + ++ L+NL +DL V L L+ L KL +
Sbjct: 326 KHFSQLQSLRELHLHNTKLDGQAMVDIAKLKNLEWIDLSKSNVQGEQLLELRKLPKLRGV 385
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
L + + GAA L +L ++ + T L N
Sbjct: 386 VLMNTPI---GAADLPYLKQLYHIDEIYVEETNLTN 418
>gi|374293090|ref|YP_005040125.1| hypothetical protein AZOLI_2723 [Azospirillum lipoferum 4B]
gi|357425029|emb|CBS87910.1| Conserved protein of unknown function; Leucine-rich repeat domain
[Azospirillum lipoferum 4B]
Length = 1026
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 95/209 (45%), Gaps = 16/209 (7%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
L L C + S L L+G+ L++LD C + + + L +S L++L S +G
Sbjct: 127 LSGLQELSCSGTSVSDLSPLSGLNGLQQLD---CSLTSVSDLSPLSGLSGLQEL--SCSG 181
Query: 152 LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF 211
+ ++ LS L L L G V+DL L L+ L+ L G+ VS+ + L
Sbjct: 182 TSVSDLSPLSGLSGLQELSCSGTSVSDL--SPLSGLSGLQQLYCSGTSVSD--LSPLSGL 237
Query: 212 PRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 271
L L+ + T V L +S LS +QQ+ V L+ L L+ L+ L+ T
Sbjct: 238 SGLQQLSCSGTSVNDLSPLS-----GLSGLQQLYCSVTSVSDLSPLSGLSGLQELSCSDT 292
Query: 272 QVSDATLFPLSTFKELIHLSLRNASLTDV 300
VSD LFPLS L L L N + +
Sbjct: 293 SVSD--LFPLSGLSSLQELYLYNVEIPGI 319
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 104/224 (46%), Gaps = 18/224 (8%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
LR L DC + S L L+G++ L++L C + + + L +S L++L S T
Sbjct: 39 LRGLQQLDCSLTSVSDLSPLSGLSDLQQLS---CSSTSVSDLSPLSGLSGLQQLDCSSTS 95
Query: 152 LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF 211
++ + LS L L L V+DL L L+ L+ L G+ VS+ + L
Sbjct: 96 VSD--LFPLSGLSGLQQLSCSSTSVSDLF--PLSGLSGLQELSCSGTSVSD--LSPLSGL 149
Query: 212 PRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 271
L L+ + T V+ L +S LS +Q++ V L+ L L+ L+ L+ T
Sbjct: 150 NGLQQLDCSLTSVSDLSPLS-----GLSGLQELSCSGTSVSDLSPLSGLSGLQELSCSGT 204
Query: 272 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLS 315
VSD L PLS L L S++D+S LS LS L LS
Sbjct: 205 SVSD--LSPLSGLSGLQQLYCSGTSVSDLS--PLSGLSGLQQLS 244
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 67/135 (49%), Gaps = 11/135 (8%)
Query: 181 LRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSF 240
L L L L+ L+ G+ VS+ + L L L+ + T V+ L +S LS
Sbjct: 11 LSPLNGLNSLQQLNCSGTSVSD--LSPLNGLRGLQQLDCSLTSVSDLSPLS-----GLSD 63
Query: 241 IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 300
+QQ+ + V L+ L L+ L++L+ T VSD LFPLS L LS + S++D
Sbjct: 64 LQQLSCSSTSVSDLSPLSGLSGLQQLDCSSTSVSD--LFPLSGLSGLQQLSCSSTSVSD- 120
Query: 301 SLHQLSSLSKLTNLS 315
L LS LS L LS
Sbjct: 121 -LFPLSGLSGLQELS 134
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 95/218 (43%), Gaps = 42/218 (19%)
Query: 99 DCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIA 158
DC + S L L G+ L++L+ C + + + L + L++L S T ++ ++
Sbjct: 2 DCSLTSVSDLSPLNGLNSLQQLN---CSGTSVSDLSPLNGLRGLQQLDCSLTSVSD--LS 56
Query: 159 LLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN 218
LS L +L L V+DL L L+ L+ LD + VS+ +FP LS
Sbjct: 57 PLSGLSDLQQLSCSSTSVSDL--SPLSGLSGLQQLDCSSTSVSD-------LFP-LS--- 103
Query: 219 LAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATL 278
LS +QQ+ + V L L L+ L+ L+ T VSD L
Sbjct: 104 ------------------GLSGLQQLSCSSTSVSDLFPLSGLSGLQELSCSGTSVSD--L 143
Query: 279 FPLSTFKELIHLSLRNASLTDVS-LHQLSSLSKLTNLS 315
PLS L L + SLT VS L LS LS L LS
Sbjct: 144 SPLSGLNGLQQL---DCSLTSVSDLSPLSGLSGLQELS 178
>gi|304439909|ref|ZP_07399803.1| conserved hypothetical protein [Peptoniphilus duerdenii ATCC
BAA-1640]
gi|304371648|gb|EFM25260.1| conserved hypothetical protein [Peptoniphilus duerdenii ATCC
BAA-1640]
Length = 1561
Score = 52.8 bits (125), Expect = 4e-04, Method: Composition-based stats.
Identities = 43/141 (30%), Positives = 78/141 (55%), Gaps = 12/141 (8%)
Query: 181 LRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSF 240
L+ L+ T LE L L+ + + R + +K L +N+ + +IS+LE NLS
Sbjct: 1005 LKGLEKATNLESLTLFENSI--RDLSPIKTLKNLKTINM---DSNYIEDISALE--NLSS 1057
Query: 241 IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 300
+Q + ++ + +T+LQNL +L+ +NL + ++ D L PL +L +LSL + + D+
Sbjct: 1058 LQSISFISNEIKDMTSLQNLKNLKLINLGKNKIQD--LSPLKNLGKLENLSLYDNEIEDI 1115
Query: 301 S-LHQLSSLS--KLTNLSIRD 318
S L L ++ +L N +I+D
Sbjct: 1116 STLKNLPGITYLRLENNNIKD 1136
>gi|261331843|emb|CBH14837.1| leucine-rich repeat protein (LRRP, pseudogene),putative
[Trypanosoma brucei gambiense DAL972]
Length = 1517
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 116/274 (42%), Gaps = 33/274 (12%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
E + L G N +DA + LG L+ L+++ + +L +L + L+LS C K
Sbjct: 555 EKLSLLGCNGIDA-VIGCLGNPPQLKMLDLSG-TNTDNESLRSLCLSQTMVSLNLSHCWK 612
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
+T+ M H+ S+ L +L LS+ G L LQ L V L +TD +
Sbjct: 613 MTN--MSHISSLEALNELNLSDCFEINAGWEALEKLQQLHVAILSNTHITDGDISHFSKC 670
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAE 247
L LDL SF + VT L NI++LE LNLS ++
Sbjct: 671 KNLVTLDL-------------------SFCD-KLLDVTALSNITTLEDLNLSNCSKIRK- 709
Query: 248 TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLS 306
L+ L L L LN++ + D+ + L K LSL N DV LS
Sbjct: 710 -----GLSVLGELPRLRVLNVKGVLLEDSVIGSLGNGKSFAKLSLENCKGFGDVK--PLS 762
Query: 307 SLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
+L L L++ SG+G+ L++LDL
Sbjct: 763 NLVTLEELNLHYCDKVTSGMGTLGSLPQLRVLDL 796
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 125/273 (45%), Gaps = 15/273 (5%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
++ + + + LRSLN++ C+ VT + L+ ++ L+EL++S C ++ G + L
Sbjct: 1052 INGDVTKNISESKSLRSLNLSHCKWVTD--ISVLSSLSTLEELNISECEQIR-KGWESLG 1108
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLW 196
+ L LS+T +TA I LSS + L L ++D+ + + + LE L +
Sbjct: 1109 KLPLLRVAILSDTKITAKDIVCLSSCKTLVKLKFFRCEELSDVTV--VYKIQSLEELIVK 1166
Query: 197 GSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTA 256
+G PRL F A ++ + S C+ L G++ +S+ +
Sbjct: 1167 NCSDGLKGLNAPGTLPRLRFF--ASAKCERMLLVHSHGCVFLLLRNVRGSD----ISVES 1220
Query: 257 LQNLNHLERLNLEQTQ-VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLS 315
+ L RL +E + ++D T PLS L LSLR + L L +L +L
Sbjct: 1221 IGTSKSLVRLTIEVGEDLTDTT--PLSDITSLEELSLRECGDNLGGVGTLEKLPRLKSLD 1278
Query: 316 IRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 348
+ + ++NS L RS+ L+L + LT+
Sbjct: 1279 LGLSDISNSTLNDICLSRSITSLNLSNNYELTD 1311
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 117/277 (42%), Gaps = 53/277 (19%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTS-SALWALTGMTCLK---------------- 118
N+VD +L L L +AD ++ + + LT + CL+
Sbjct: 240 NNVDNNGARHLFNIGTLEELVIADTMQLANIRGISRLTNLKCLELNSTDIDDSCVRRICA 299
Query: 119 -----ELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 173
+L +S C + DA + ++ LE+L L+ GI L L L VLDL G
Sbjct: 300 CVKLFKLSVSECNNIMDA--TPISQLAALEELNLNSCYHITKGIGTLGMLLRLRVLDLSG 357
Query: 174 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 233
PV D L+ L LE L+ LS+ + T + L N ++
Sbjct: 358 APVEDNFLKDLCDCGSLERLN-------------------LSYC-IQLTDINPLSNAAAT 397
Query: 234 ECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 293
E LNL+ +++ +V L L+ L+++ +S+ +L + T L+ +SL
Sbjct: 398 EELNLNGCRRITRGMGVVWVLPKLR------VLHMKDMHLSEPSLDSVGTGGPLVKVSLD 451
Query: 294 N-ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 329
N A D++L LSS+ L L+I+ V SG+G
Sbjct: 452 NCAGFGDMTL--LSSIVTLEELNIQKCVDIISGVGCL 486
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 114/263 (43%), Gaps = 43/263 (16%)
Query: 148 SETGLT-ADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAA 206
S TGL+ + +A + +L+ LS+L G+ D V+ L +L+ LDL G+ N
Sbjct: 538 SITGLSNVEALANILTLEKLSLLGCNGI---DAVIGCLGNPPQLKMLDLSGTNTDNESLR 594
Query: 207 VLKMFPRLSFLNLA--WTGVTKLPNISSLECLN---LSFIQQVGAETDLVLSLTALQNLN 261
L + + LNL+ W +T + +ISSLE LN LS ++ A + AL+ L
Sbjct: 595 SLCLSQTMVSLNLSHCWK-MTNMSHISSLEALNELNLSDCFEINAGWE------ALEKLQ 647
Query: 262 HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVL 321
L L T ++D + S K L+ L L S D L +++LS +T L D L
Sbjct: 648 QLHVAILSNTHITDGDISHFSKCKNLVTLDL---SFCD-KLLDVTALSNITTL--EDLNL 701
Query: 322 TNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGP 381
+N K + L +L G L PR+ V + V+ IGS G
Sbjct: 702 SNCS----KIRKGLSVL----GEL-------------PRLRVLNVKGVLLEDSVIGSLGN 740
Query: 382 SPSRTSLRASLVKQKQDPMPMSH 404
S L K D P+S+
Sbjct: 741 GKSFAKLSLENCKGFGDVKPLSN 763
>gi|196229524|ref|ZP_03128389.1| hypothetical protein CfE428DRAFT_1554 [Chthoniobacter flavus
Ellin428]
gi|196226756|gb|EDY21261.1| hypothetical protein CfE428DRAFT_1554 [Chthoniobacter flavus
Ellin428]
Length = 472
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 106/238 (44%), Gaps = 15/238 (6%)
Query: 132 GMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLE 191
G HL+ L+ L++S + + + ++ +NL L L G + D + L LTKL
Sbjct: 235 GFAHLVDCHGLKSLYVSGFSILSGMVENIARCKNLETLSLLGTELKDAGIAPLSALTKLH 294
Query: 192 YLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLN-------LSFIQQV 244
LD GS VS A + +L+ LNL T P + C N L ++
Sbjct: 295 SLDCSGSGVSGTAFAAWPVRSQLTSLNLDRT-----PGVDDAICKNIEHAFPKLEYLNVK 349
Query: 245 GAETDLVLSLTA-LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLH 303
A++ + L L+ L LNL ++D + L+ L L++ A L++ +
Sbjct: 350 LADSGFTPAGAGILARLHSLHTLNLGGAGINDEVVAQLARNDALNMLAIPMAQLSEKGVV 409
Query: 304 QLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRI 361
L+ + L LS+ +T++ + +F + LK L++ G D L+ K+ P++
Sbjct: 410 ALAKIPHLNELSLNVPPVTDAAVKAFARCKELKTLNI--GKDAASDTELKLHKVLPQL 465
>gi|42779687|ref|NP_976934.1| internalin [Bacillus cereus ATCC 10987]
gi|42735604|gb|AAS39542.1| internalin, putative [Bacillus cereus ATCC 10987]
Length = 1088
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 106/223 (47%), Gaps = 31/223 (13%)
Query: 81 EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
++M L AF L NV D ++S LK+L + +K+ ++++ IS
Sbjct: 236 QYMENLEAFE-LHESNVKDISPISS-----------LKKL---KTMKLYLNPIENIAPIS 280
Query: 141 TLEKL-WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLV-LRSLQVLTKLEYLDLWGS 198
LEKL +L+ + LS L+ + VLDL G +TD+ L S+ +TKL YL
Sbjct: 281 QLEKLQFLTLRDNKISDLTPLSQLKKVKVLDLIGNEITDIKPLFSMDSVTKL-YL----- 334
Query: 199 QVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL-NLSFIQQVGAETDLVLSLTAL 257
SN + L +L L L W G + N++ + L NL ++ AE + LT L
Sbjct: 335 --SNNKISDLTDIEKLDDLRLLWIGNNYIDNLTEIGKLKNLVELEVANAE---IRDLTPL 389
Query: 258 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 300
+ L+ L+LEQ +SD + P+S L L+L + D+
Sbjct: 390 AKMQQLQSLDLEQNYISDIS--PISKLNNLYALNLIANEIRDI 430
>gi|290980468|ref|XP_002672954.1| predicted protein [Naegleria gruberi]
gi|284086534|gb|EFC40210.1| predicted protein [Naegleria gruberi]
Length = 349
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 112/251 (44%), Gaps = 19/251 (7%)
Query: 81 EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
E + ++ + L SLN+ R A + ++ M L L++S V + D G K++ +
Sbjct: 94 EQLKFVTEMKQLTSLNIRGNRIGVEGAKY-ISEMKQLTSLNISYNV-IGDEGAKYISEMK 151
Query: 141 TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 200
L L + E + +G +S ++ L+ LD+ + D + + + +L L+++ + +
Sbjct: 152 QLISLNIRENEIGDEGAKYISEMKQLTSLDISYNIIGDEGAKYISGMKQLTSLNIYYTLI 211
Query: 201 SNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSFIQQVGAETDLVLSLT 255
GA + +L+ LN++ GV + + L LN+S+ + + +
Sbjct: 212 GIEGAKFISEMKQLTSLNISENEIGIEGVKYISEMKQLTSLNISYNRTGDEGAKFISEMK 271
Query: 256 ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLS 315
L +LN ++ +S K+L L++R + +S + +LT+L+
Sbjct: 272 QLTSLNICGKVKF------------ISEMKQLTSLNIRGNRIGVEGAKYISEMKQLTSLN 319
Query: 316 IRDAVLTNSGL 326
IR + + GL
Sbjct: 320 IRGNRIGDQGL 330
>gi|71662333|ref|XP_818175.1| leucine-rich repeat protein (LRRP) [Trypanosoma cruzi strain CL
Brener]
gi|70883410|gb|EAN96324.1| leucine-rich repeat protein (LRRP), putative [Trypanosoma cruzi]
Length = 415
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 95/209 (45%), Gaps = 13/209 (6%)
Query: 16 AACQSGESVQKWRRQRRSLERLPA--HLADSLLRHLIRRRLIFPSLLEVFK-HNAEAIEL 72
A+C + E + W R RSL R+ A HL L R + LL + H E ++L
Sbjct: 143 ASCPTLEHL--WLRSCRSLTRVEALSHLHSLKSLDLSRTGVTDDGLLALTACHLLEEVDL 200
Query: 73 RGENSVDA-EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDA 131
G + + A +M +G R L+ N +T A+ A+ T L LD++ C VT
Sbjct: 201 SGCDFICALPFMKNMGCLRVLKLRNSG----ITDRAISAIGAATALVHLDIAGCFLVTS- 255
Query: 132 GMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLE 191
+ L + LE + S G+ G+ LS NL L + V +L VL+KL+
Sbjct: 256 -LNPLGGLKRLEWMNTSWCGIRDGGVEGLSCCDNLEYLSMARCWDIHNV-NALGVLSKLQ 313
Query: 192 YLDLWGSQVSNRGAAVLKMFPRLSFLNLA 220
LDL G+ V + G A L L LNL+
Sbjct: 314 VLDLCGTNVDDEGIAGLSRCASLCSLNLS 342
>gi|149173875|ref|ZP_01852504.1| hypothetical protein PM8797T_05540 [Planctomyces maris DSM 8797]
gi|148847405|gb|EDL61739.1| hypothetical protein PM8797T_05540 [Planctomyces maris DSM 8797]
Length = 525
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 149/357 (41%), Gaps = 47/357 (13%)
Query: 26 KWRRQRRS------LERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVD 79
+W+R + L+RLP LAD L + L EV + N
Sbjct: 60 RWKRNQHGQVYWLFLKRLP--LADDDLT-------VLKELPEVQTLTLRGVHTIKGNHFT 110
Query: 80 AEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSI 139
+ + Y+G + LR L+++ ++T + + L + L+ LDLS C + TDA K L +
Sbjct: 111 DDGLRYVGQLKKLRYLDLSVNYQLTDAGMRHLESLKQLEHLDLSGCRRFTDASGKSLAQL 170
Query: 140 STLEKLWLSETGLTADGIALLSS---LQNLSVLDLGGL--------PVTDLVLRSLQ-VL 187
++L L L +T LT D + LS L++L+V G+ P+ + L L+ +L
Sbjct: 171 TSLRTLKLRQTSLTPDVLTALSQLPELKHLAVKYSKGMWLNENTIVPLEKMPLEELEGML 230
Query: 188 TKLEYLDLWGS-------------QVSNRGAAVLKMFPRLSFLNLAWTGVT-------KL 227
K E L L + + + L ++ LN+ T T +L
Sbjct: 231 IKDENLPLIAQMKSLKSLPFEQDRSIKDDQLSYLTHIRQIKKLNIVLTRGTSDTSQLIQL 290
Query: 228 PNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 287
+ LE L++S + L AL + L+ L + V T +
Sbjct: 291 QALPELETLSISLGNSTEGDPLDRSGLLALAKIPALKELGIGLVNVPILEAISHCTQVQK 350
Query: 288 IHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGW 344
++L++ + L L +S+L +L+++ A++++ + +SL+ + + GW
Sbjct: 351 LNLNVDTSQFQPTDLAYLKEMSRLKDLTVQIALVSDDLWATLGQVKSLEEISFNWGW 407
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 113/259 (43%), Gaps = 31/259 (11%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+++ + S+ + ++YL R ++ LN+ R + ++ L + L EL+
Sbjct: 246 KSLPFEQDRSIKDDQLSYLTHIRQIKKLNIVLTRGTSDTS--QLIQLQALPELET----- 298
Query: 128 VTDAGMKHLLSIS---TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL 184
LSIS + E L +GL A +A + +L+ L + L +P+ + +
Sbjct: 299 ---------LSISLGNSTEGDPLDRSGLLA--LAKIPALKELGI-GLVNVPILEAISHCT 346
Query: 185 QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLE--CLN 237
QV KL L++ SQ A LK RL L + V+ L + SLE N
Sbjct: 347 QV-QKLN-LNVDTSQFQPTDLAYLKEMSRLKDLTVQIALVSDDLWATLGQVKSLEEISFN 404
Query: 238 LSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 297
+ Q + SL LQNL L+ L+L V+D L L + L L L NA +
Sbjct: 405 WGWPPQKEPPPFSMTSLKQLQNLPRLKGLDLNGFPVTDEGLGYLGQCRTLERLGLNNAPI 464
Query: 298 TDVSLHQLSSLSKLTNLSI 316
T+ L QL LS+L LS
Sbjct: 465 TNAGLLQLRHLSQLKKLSF 483
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 10/137 (7%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTG-MTCLKELDLS-------RCVKVTDAGMK 134
+AYL L+ L V + S LWA G + L+E+ + + +K
Sbjct: 365 LAYLKEMSRLKDLTVQIA--LVSDDLWATLGQVKSLEEISFNWGWPPQKEPPPFSMTSLK 422
Query: 135 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 194
L ++ L+ L L+ +T +G+ L + L L L P+T+ L L+ L++L+ L
Sbjct: 423 QLQNLPRLKGLDLNGFPVTDEGLGYLGQCRTLERLGLNNAPITNAGLLQLRHLSQLKKLS 482
Query: 195 LWGSQVSNRGAAVLKMF 211
+GS++ A L F
Sbjct: 483 FYGSKIDREPAEELHQF 499
>gi|431919440|gb|ELK17959.1| F-box/LRR-repeat protein 2, partial [Pteropus alecto]
Length = 385
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 152/333 (45%), Gaps = 27/333 (8%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC-LKELDLSRCVK 127
+ LRG V D + R + LN+ C ++T S ++L+ LK LDL+ CV
Sbjct: 64 LSLRGCIGVGDPSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVS 123
Query: 128 VTDAGMKHLL-SISTLEKLWLSETG-LTADGI-ALLSSLQNLSVLDLGGLP-VTDLVLRS 183
+T++ +K + LE L LS +T DGI AL+ + L L L G + D L+
Sbjct: 124 ITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKH 183
Query: 184 LQ-VLTKLEYLDLWG-SQVSNRGAA-VLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSF 240
+Q +L L+L S++++ G + + RL L L+ G ++++L LN
Sbjct: 184 IQNYCHELMSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCGNLTDASLTALA-LNCPR 242
Query: 241 IQQVGAE-----TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 295
+Q + A TD +L A +N + LE+++LE+ +S + L T ++HLS
Sbjct: 243 LQILEAARCSHLTDAGFTLLA-RNCHDLEKMDLEECILS-LSHCELITDDGILHLS---- 296
Query: 296 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFC 355
H+ + +L N ++T+ L + R L+ L+L+ +T I +
Sbjct: 297 --NSTCGHERLRVLELDNC----LLITDVALEHLENCRGLERLELYDCQQVTRTGIKRMR 350
Query: 356 KMHPRIEVWHELSVICPSDQIGSNGPSPSRTSL 388
P ++V + + P +G +G R +
Sbjct: 351 AQLPHVKVHAYFAPVTPPTAVGGSGHRLCRCCV 383
>gi|87306873|ref|ZP_01089019.1| hypothetical protein DSM3645_00430 [Blastopirellula marina DSM
3645]
gi|87290246|gb|EAQ82134.1| hypothetical protein DSM3645_00430 [Blastopirellula marina DSM
3645]
Length = 240
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 79/163 (48%), Gaps = 13/163 (7%)
Query: 152 LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF 211
LT +A++ L +L VLDL G P+T L L+ L KL L L GS +++ V +
Sbjct: 87 LTDQELAIVDGLPHLEVLDLRGAPITGQALVHLENLPKLRELYLGGSVITD----VEQTL 142
Query: 212 PRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 271
R + + A LP+I+ L+ L + + + G TD + L L LE L L
Sbjct: 143 FRTTITDAA------LPSIAKLKTLRVLSLARTGI-TD--AGIAPLAELPDLEDLFLVDV 193
Query: 272 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 314
+V+DA + L+ K L HL L +T + +L L T++
Sbjct: 194 EVTDAAIEDLAKLKSLKHLYLHETPITAAGVKRLQRLLPETDV 236
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 92 LRSLNVADCR--RVTSSALWALTGMTCLKELDLSRCV-----------KVTDAGMKHLLS 138
L L V D R +T AL L + L+EL L V +TDA + +
Sbjct: 98 LPHLEVLDLRGAPITGQALVHLENLPKLRELYLGGSVITDVEQTLFRTTITDAALPSIAK 157
Query: 139 ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
+ TL L L+ TG+T GIA L+ L +L L L + VTD + L L L++L L +
Sbjct: 158 LKTLRVLSLARTGITDAGIAPLAELPDLEDLFLVDVEVTDAAIEDLAKLKSLKHLYLHET 217
Query: 199 QVSNRGAAVLK 209
++ G L+
Sbjct: 218 PITAAGVKRLQ 228
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 78/190 (41%), Gaps = 38/190 (20%)
Query: 176 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLEC 235
+TD L + L LE LDL G+ ++ + L+ P+L L L + +T
Sbjct: 87 LTDQELAIVDGLPHLEVLDLRGAPITGQALVHLENLPKLRELYLGGSVITD--------- 137
Query: 236 LNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 295
++Q L +T ++DA L ++ K L LSL
Sbjct: 138 -----VEQ-----------------------TLFRTTITDAALPSIAKLKTLRVLSLART 169
Query: 296 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFC 355
+TD + L+ L L +L + D +T++ + +SLK L LH +T + +
Sbjct: 170 GITDAGIAPLAELPDLEDLFLVDVEVTDAAIEDLAKLKSLKHLYLHETP-ITAAGVKRLQ 228
Query: 356 KMHPRIEVWH 365
++ P +V H
Sbjct: 229 RLLPETDVQH 238
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 13/129 (10%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLN-----VADCRR------VTSSALWALTGMTC 116
E ++LRG + + + +L LR L + D + +T +AL ++ +
Sbjct: 102 EVLDLRG-APITGQALVHLENLPKLRELYLGGSVITDVEQTLFRTTITDAALPSIAKLKT 160
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 176
L+ L L+R +TDAG+ L + LE L+L + +T I L+ L++L L L P+
Sbjct: 161 LRVLSLART-GITDAGIAPLAELPDLEDLFLVDVEVTDAAIEDLAKLKSLKHLYLHETPI 219
Query: 177 TDLVLRSLQ 185
T ++ LQ
Sbjct: 220 TAAGVKRLQ 228
>gi|290974572|ref|XP_002670019.1| leucine-rich repeat protein [Naegleria gruberi]
gi|284083573|gb|EFC37275.1| leucine-rich repeat protein [Naegleria gruberi]
Length = 334
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 96/211 (45%), Gaps = 11/211 (5%)
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
K + + L L +S+ G+ +G+ L+S L+ L+ L++ + D ++ + L +L L
Sbjct: 129 KFISEMKQLTSLIISDNGIGDEGVKLISELKQLTSLNMSNNRIGDEGVKLISELKQLTSL 188
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSFIQQVGAET 248
D+ + + G + +L+ LN+ + GV + + L LN+S +G E
Sbjct: 189 DISLNDIGAEGVKSISEMKQLTSLNINYNRIGDEGVKLISELKQLTSLNISN-NGIGDE- 246
Query: 249 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 308
+ + + L LN+ + D + +S K+L L++ N + +S +
Sbjct: 247 ----GVKLISEMKQLTSLNISNNGIGDEGVKSISELKQLTSLNISNNRIGAEGAKSISEM 302
Query: 309 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 339
+LT+LSI + + G+ S + L L+
Sbjct: 303 KQLTSLSINYNQIGDEGVKSISDMKQLTSLN 333
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 84/167 (50%), Gaps = 7/167 (4%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + E + + + L SL+++ + + + +++ M L L+++ ++ D G+K
Sbjct: 169 NRIGDEGVKLISELKQLTSLDIS-LNDIGAEGVKSISEMKQLTSLNINYN-RIGDEGVKL 226
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ + L L +S G+ +G+ L+S ++ L+ L++ + D ++S+ L +L L++
Sbjct: 227 ISELKQLTSLNISNNGIGDEGVKLISEMKQLTSLNISNNGIGDEGVKSISELKQLTSLNI 286
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLN 237
+++ GA + +L+ L++ + GV + ++ L LN
Sbjct: 287 SNNRIGAEGAKSISEMKQLTSLSINYNQIGDEGVKSISDMKQLTSLN 333
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 92/193 (47%), Gaps = 11/193 (5%)
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
+ D G+K + + L L +S + +G+ L+S L+ L+ LD+ + ++S+ +
Sbjct: 147 IGDEGVKLISELKQLTSLNMSNNRIGDEGVKLISELKQLTSLDISLNDIGAEGVKSISEM 206
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSFIQ 242
+L L++ +++ + G ++ +L+ LN++ G+ + + L LN+S
Sbjct: 207 KQLTSLNINYNRIGDEGVKLISELKQLTSLNISNNGIGDEGVKLISEMKQLTSLNISN-N 265
Query: 243 QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 302
+G E + ++ L L LN+ ++ +S K+L LS+ + D +
Sbjct: 266 GIGDE-----GVKSISELKQLTSLNISNNRIGAEGAKSISEMKQLTSLSINYNQIGDEGV 320
Query: 303 HQLSSLSKLTNLS 315
+S + +LT+L+
Sbjct: 321 KSISDMKQLTSLN 333
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 74/156 (47%), Gaps = 11/156 (7%)
Query: 200 VSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSFIQQVGAETDLVLSL 254
+ + G ++ +L+ LN++ GV + + L L++S + +GAE +
Sbjct: 147 IGDEGVKLISELKQLTSLNMSNNRIGDEGVKLISELKQLTSLDIS-LNDIGAE-----GV 200
Query: 255 TALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 314
++ + L LN+ ++ D + +S K+L L++ N + D + +S + +LT+L
Sbjct: 201 KSISEMKQLTSLNINYNRIGDEGVKLISELKQLTSLNISNNGIGDEGVKLISEMKQLTSL 260
Query: 315 SIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 350
+I + + + G+ S + L L++ + E A
Sbjct: 261 NISNNGIGDEGVKSISELKQLTSLNISNNRIGAEGA 296
>gi|224145021|ref|XP_002325498.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
gi|222862373|gb|EEE99879.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
Length = 1561
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 121/260 (46%), Gaps = 14/260 (5%)
Query: 58 SLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCL 117
S L F N + L G + E + +G R L L++ C R+ + A++ + CL
Sbjct: 778 SRLPDFSRNIRYLYLNG--TAIEELPSSIGDLRELIYLDLGGCNRLKNLP-SAVSKLVCL 834
Query: 118 KELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVT 177
++LDLS C +T+ +T+++L+L+ T + + + + L L+ L L
Sbjct: 835 EKLDLSGCSNITEFPKVS----NTIKELYLNGTAIR-EIPSSIECLFELAELHLRNCKQF 889
Query: 178 DLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLP----NISSL 233
+++ S+ L KL+ L+L G VL+ L +L L T +TKLP N+ L
Sbjct: 890 EILPSSICKLRKLQRLNLSGCVQFRDFPEVLEPMVCLRYLYLEQTRITKLPSPIGNLKGL 949
Query: 234 ECLNLSFIQQV-GAETDLVLSLTALQNLNHLERLNLEQTQVSDA-TLFPLSTFKELIHLS 291
CL + Q + E + L L L+ L +LNL+ Q+ + L + E++ LS
Sbjct: 950 ACLEVGNCQHLRDIECIVDLQLPERCKLDCLRKLNLDGCQIWEVPDSLGLVSSLEVLDLS 1009
Query: 292 LRNASLTDVSLHQLSSLSKL 311
N +S+++L L L
Sbjct: 1010 GNNFRSIPISINKLFELQYL 1029
>gi|406831652|ref|ZP_11091246.1| hypothetical protein SpalD1_08439 [Schlesneria paludicola DSM
18645]
Length = 267
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 73/142 (51%), Gaps = 5/142 (3%)
Query: 80 AEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSI 139
AE ++ +G + L++L + + VT A+ L GM L L L +++D G++HL +
Sbjct: 95 AELLSEIGTLKELKTLWLLGPQ-VTDVAVEKLVGMKNLTGLYLGYS-QLSDRGIEHLKGL 152
Query: 140 STLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQ 199
S LE ++L +T + +L L NL + L VTD ++ L+ L L+YL L G+
Sbjct: 153 SGLEWIFLIQTQVGDKTCDILQGLPNLKSIALNDTNVTDAGVKKLKALGDLQYLGLAGTD 212
Query: 200 VSNRGAAVL---KMFPRLSFLN 218
VS+ G L K RL N
Sbjct: 213 VSDDGLKYLIEMKALKRLDIGN 234
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 79/179 (44%), Gaps = 25/179 (13%)
Query: 152 LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF 211
L A+ ++ + +L+ L L L G VTD+ + L + L L L SQ+S+RG LK
Sbjct: 93 LPAELLSEIGTLKELKTLWLLGPQVTDVAVEKLVGMKNLTGLYLGYSQLSDRGIEHLKGL 152
Query: 212 PRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 271
L ++ L T QVG +T LQ L +L+ + L T
Sbjct: 153 SGLEWIFLIQT--------------------QVGDKT-----CDILQGLPNLKSIALNDT 187
Query: 272 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 330
V+DA + L +L +L L ++D L L + L L I + ++++ G + +
Sbjct: 188 NVTDAGVKKLKALGDLQYLGLAGTDVSDDGLKYLIEMKALKRLDIGNTLISDEGQAAIR 246
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 71/144 (49%), Gaps = 13/144 (9%)
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
++ L+ LWL +T + L ++NL+ L LG ++D + L+ L+ LE++ L
Sbjct: 103 TLKELKTLWLLGPQVTDVAVEKLVGMKNLTGLYLGYSQLSDRGIEHLKGLSGLEWIFLIQ 162
Query: 198 SQVSNRGAAVLKMFPRLSFL-----NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLV- 251
+QV ++ +L+ P L + N+ GV KL + L+ L L A TD+
Sbjct: 163 TQVGDKTCDILQGLPNLKSIALNDTNVTDAGVKKLKALGDLQYLGL-------AGTDVSD 215
Query: 252 LSLTALQNLNHLERLNLEQTQVSD 275
L L + L+RL++ T +SD
Sbjct: 216 DGLKYLIEMKALKRLDIGNTLISD 239
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%)
Query: 257 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 316
L+ L+ LE + L QTQV D T L L ++L + ++TD + +L +L L L +
Sbjct: 149 LKGLSGLEWIFLIQTQVGDKTCDILQGLPNLKSIALNDTNVTDAGVKKLKALGDLQYLGL 208
Query: 317 RDAVLTNSGLGSFKPPRSLKLLDL 340
+++ GL ++LK LD+
Sbjct: 209 AGTDVSDDGLKYLIEMKALKRLDI 232
>gi|258576605|ref|XP_002542484.1| predicted protein [Uncinocarpus reesii 1704]
gi|237902750|gb|EEP77151.1| predicted protein [Uncinocarpus reesii 1704]
Length = 739
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 102/232 (43%), Gaps = 60/232 (25%)
Query: 71 ELR-GE-NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWAL-----------TG---- 113
ELR GE +VD E+M L L +L ++ C +T +L L TG
Sbjct: 352 ELRIGEFRAVDNEFMQALFETNTLETLILSHCSALTDDSLKILSHGSDPKIDILTGRPIV 411
Query: 114 -MTCLKELDLSRCVKVTDAGMKHLLSIST-LEKLWLSETGLTADGIALLSSLQNLSVLDL 171
LK LDLSRC ++D G+ HL + LE L LS SSL N S+ +L
Sbjct: 412 PARTLKHLDLSRCRGISDVGIGHLAGFTPELESLQLS----------FCSSLGNDSITNL 461
Query: 172 GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNIS 231
+R+ L +L+ +L N ++K P S
Sbjct: 462 ---------IRTTPRLARLDIEELE------------------ELTNNVLIALSKAPCAS 494
Query: 232 SLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLST 283
LE LN+S+ +++G +T + + L+N +L L+L+ T+VSD TL + T
Sbjct: 495 RLEHLNISYCEKLG-DTGM---MQVLKNCPNLRSLDLDNTRVSDITLMEMCT 542
>gi|228906295|ref|ZP_04070180.1| hypothetical protein bthur0013_4780 [Bacillus thuringiensis IBL
200]
gi|228853318|gb|EEM98090.1| hypothetical protein bthur0013_4780 [Bacillus thuringiensis IBL
200]
Length = 945
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 106/219 (48%), Gaps = 24/219 (10%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEK- 144
+ Y+ +L R + + A++ + LK +DL T ++ + I LE
Sbjct: 247 IAGLEYMTNLEKLTLRESNVTDISAISKLRSLKYVDL------TSNSIESIHPIGQLENI 300
Query: 145 --LWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
L+L + ++ + LS ++ + LDL G + D+ + L L+ ++ L L +Q+S+
Sbjct: 301 NMLFLRDNKIS--DLTPLSKMKKIKTLDLIGNNIKDI--QPLFTLSTMKQLYLANNQISD 356
Query: 203 RGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL-NLSFIQQVGAETDLVLSLTALQNLN 261
L RL+ + L W G K+ N+ S+ + NL ++ +E + ++ L L
Sbjct: 357 -----LNGIDRLNNVELLWIGNNKINNVESISKMSNLIELEIADSE---IKDISPLSQLG 408
Query: 262 HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 300
+L+ LNLE+ +SD + PLST L ++L ++DV
Sbjct: 409 NLQVLNLEENYISDIS--PLSTLTNLHEINLGANEISDV 445
>gi|322790910|gb|EFZ15576.1| hypothetical protein SINV_11426 [Solenopsis invicta]
Length = 526
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 77/140 (55%), Gaps = 16/140 (11%)
Query: 92 LRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWL--- 147
L L++ DC+R++ AL ++ G T LK ++LS CV +TD+G+KHL +S+L +L L
Sbjct: 347 LEHLSLQDCQRLSDEALRHVSLGFTTLKSINLSFCVCITDSGVKHLARMSSLRELNLRSC 406
Query: 148 ---SETGLT--ADGIALLSSLQNLSVLDLGGLPVTDLVLRSL-QVLTKLEYLDLWGSQVS 201
S+ G+ A+G + ++SL ++S D + D L + Q L L+ L L Q+S
Sbjct: 407 DNISDIGMAYLAEGGSRITSL-DVSFCD----KIGDQALVHISQGLFNLKSLSLSACQIS 461
Query: 202 NRG-AAVLKMFPRLSFLNLA 220
+ G + K L LN+
Sbjct: 462 DEGICKIAKTLHDLETLNIG 481
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 123/255 (48%), Gaps = 39/255 (15%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWL 147
+ L L + C +T++ L + G+ LK LDL C V+D G+ HL ++
Sbjct: 285 LKNLEHLELGGCCNITNTGLLLIAWGLKKLKRLDLRSCWHVSDIGIAHLAGLNR------ 338
Query: 148 SETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV-LTKLEYLDL-WGSQVSNRGA 205
TADG +L++LS+ D L +D LR + + T L+ ++L + +++ G
Sbjct: 339 ----ETADGNL---ALEHLSLQDCQRL--SDEALRHVSLGFTTLKSINLSFCVCITDSG- 388
Query: 206 AVLKMFPRLSFL---------NLAWTGVTKLPNISS-LECLNLSFIQQVGAETDLVLSLT 255
+K R+S L N++ G+ L S + L++SF ++G + + +S
Sbjct: 389 --VKHLARMSSLRELNLRSCDNISDIGMAYLAEGGSRITSLDVSFCDKIGDQALVHIS-- 444
Query: 256 ALQNLNHLERLNLEQTQVSDATLFPLS-TFKELIHLSLRNAS-LTDVSLHQLS-SLSKLT 312
Q L +L+ L+L Q+SD + ++ T +L L++ S LTD LH ++ S+ L
Sbjct: 445 --QGLFNLKSLSLSACQISDEGICKIAKTLHDLETLNIGQCSRLTDRGLHTVAESMKNLK 502
Query: 313 NLSIRDAV-LTNSGL 326
+ + +T SGL
Sbjct: 503 CIDLYGCTKITTSGL 517
>gi|290996081|ref|XP_002680611.1| predicted protein [Naegleria gruberi]
gi|284094232|gb|EFC47867.1| predicted protein [Naegleria gruberi]
Length = 412
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 124/285 (43%), Gaps = 22/285 (7%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
EN + E Y+ R L SL+++D A + ++ M L L++S ++D G K
Sbjct: 135 ENQIGDEGAKYISEMRQLTSLDISDIEIGDEGAKY-ISEMKQLTSLNISYNA-ISDEGAK 192
Query: 135 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 194
+ + L L + + + +G + ++ L+ L++ ++D + + + +L LD
Sbjct: 193 FISEMKQLMSLHIYKNLIGDEGAKYIREMKQLTSLNISYNSISDEGAKFISEMKQLTSLD 252
Query: 195 LWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLS-----FIQQV 244
+ +++S GA + +L+ L+++ GV L + L L +S + Q+
Sbjct: 253 IVFNEISGEGAKFISEMKQLTSLDISDNEIGDEGVKYLSEMKQLTSLTISGNEITYCNQI 312
Query: 245 GAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQ 304
E +S + L L++ +SD +S K+L L++ S++
Sbjct: 313 SEEGAKFIS-----EMKQLTSLDISYNLISDEGAKYISEMKQLTSLNISYNSISGEGAKF 367
Query: 305 LSSLSKLTNLSIRDAVLTNSG---LGSFKPPRSLKLLD--LHGGW 344
+S + +LT+L I + + G + K SL + D + W
Sbjct: 368 ISEMKQLTSLDIVSNRIGDEGAKYISEMKQLTSLNISDNQFNSNW 412
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 122/264 (46%), Gaps = 13/264 (4%)
Query: 85 YLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEK 144
++ + L SL++++ ++ ++ M L LD+S +++ D G K++ + L
Sbjct: 121 FITEMKQLTSLDISE-NQIGDEGAKYISEMRQLTSLDISD-IEIGDEGAKYISEMKQLTS 178
Query: 145 LWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG 204
L +S ++ +G +S ++ L L + + D + ++ + +L L++ + +S+ G
Sbjct: 179 LNISYNAISDEGAKFISEMKQLMSLHIYKNLIGDEGAKYIREMKQLTSLNISYNSISDEG 238
Query: 205 AAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQN 259
A + +L+ L++ + G + + L L++S ++G E V L+ ++
Sbjct: 239 AKFISEMKQLTSLDIVFNEISGEGAKFISEMKQLTSLDIS-DNEIGDEG--VKYLSEMKQ 295
Query: 260 LNHLERLNLEQT---QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 316
L L E T Q+S+ +S K+L L + ++D +S + +LT+L+I
Sbjct: 296 LTSLTISGNEITYCNQISEEGAKFISEMKQLTSLDISYNLISDEGAKYISEMKQLTSLNI 355
Query: 317 RDAVLTNSGLGSFKPPRSLKLLDL 340
++ G + L LD+
Sbjct: 356 SYNSISGEGAKFISEMKQLTSLDI 379
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 88/196 (44%), Gaps = 15/196 (7%)
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
K + + L L +SE + +G +S ++ L+ LD+ + + D + + + +L L
Sbjct: 120 KFITEMKQLTSLDISENQIGDEGAKYISEMRQLTSLDISDIEIGDEGAKYISEMKQLTSL 179
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSF--IQQVGA 246
++ + +S+ GA + +L L++ G + + L LN+S+ I GA
Sbjct: 180 NISYNAISDEGAKFISEMKQLMSLHIYKNLIGDEGAKYIREMKQLTSLNISYNSISDEGA 239
Query: 247 ETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLS 306
+ + + L L++ ++S +S K+L L + + + D + LS
Sbjct: 240 K--------FISEMKQLTSLDIVFNEISGEGAKFISEMKQLTSLDISDNEIGDEGVKYLS 291
Query: 307 SLSKLTNLSIRDAVLT 322
+ +LT+L+I +T
Sbjct: 292 EMKQLTSLTISGNEIT 307
Score = 38.5 bits (88), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 35/192 (18%), Positives = 84/192 (43%), Gaps = 11/192 (5%)
Query: 159 LLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN 218
++ ++ L+ LD+ + D + + + +L LD+ ++ + GA + +L+ LN
Sbjct: 121 FITEMKQLTSLDISENQIGDEGAKYISEMRQLTSLDISDIEIGDEGAKYISEMKQLTSLN 180
Query: 219 LAWTGVTK-----LPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQV 273
+++ ++ + + L L++ + +G E ++ + L LN+ +
Sbjct: 181 ISYNAISDEGAKFISEMKQLMSLHI-YKNLIGDE-----GAKYIREMKQLTSLNISYNSI 234
Query: 274 SDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPR 333
SD +S K+L L + ++ +S + +LT+L I D + + G+ +
Sbjct: 235 SDEGAKFISEMKQLTSLDIVFNEISGEGAKFISEMKQLTSLDISDNEIGDEGVKYLSEMK 294
Query: 334 SLKLLDLHGGWL 345
L L + G +
Sbjct: 295 QLTSLTISGNEI 306
>gi|428303964|ref|YP_007140789.1| hypothetical protein Cri9333_0293 [Crinalium epipsammum PCC 9333]
gi|428245499|gb|AFZ11279.1| leucine-rich repeat-containing protein [Crinalium epipsammum PCC
9333]
Length = 409
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 147/315 (46%), Gaps = 36/315 (11%)
Query: 39 AHLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVA 98
D+ L IRR++ P + + I++ N+ + + + A R L L +
Sbjct: 112 VKFKDAKLEAAIRRQVEIPDSKRLTLEVLQGIKVLDANNAEITSLEGIQALRNLTILRL- 170
Query: 99 DCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIA 158
D ++ S + L G+T L+ L L +++D +K L ++ L L+L++ ++ +
Sbjct: 171 DGNKI--SDVTPLAGLTNLRNLRLDHS-QISD--VKPLTGLTNLSVLYLNKNQIS--DVT 223
Query: 159 LLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN 218
L+ L NL L L ++D+ L L L L L +Q+S+ + P F+N
Sbjct: 224 PLAGLINLRDLRLDQNQISDVT--PLAGLINLRGLGLDQNQISD-------VKPLFGFVN 274
Query: 219 LAWTGVTKLPNISSLECL-NLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDAT 277
L + +++ L L NL+ + + V LTAL NL LE L+Q Q+SD
Sbjct: 275 LTTLYLNDNSDVTPLFSLANLTVLTLYDNKISDVKPLTALTNLTVLE---LDQNQISDVK 331
Query: 278 LFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL-----SIRDAV----LTN-SGLG 327
PL++ L LSL + ++DV L+ L+KLT+L I D LTN SGLG
Sbjct: 332 --PLASLARLTRLSLNDNQISDV--EPLAGLAKLTSLRLSQNQISDVKPLTGLTNLSGLG 387
Query: 328 -SFKPPRSLKLLDLH 341
S P + +LL H
Sbjct: 388 LSDNPISNCQLLPEH 402
>gi|261334051|emb|CBH17045.1| T. brucei spp.-specific protein [Trypanosoma brucei gambiense
DAL972]
Length = 1399
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 127/314 (40%), Gaps = 65/314 (20%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+ LG YLR LN+ + ++S + L +L L +++ ++ L +I TL
Sbjct: 434 VCCLGTLPYLRVLNIKE-AHISSLDFTGIGASKSLLQLTLESITGLSN--VEALANILTL 490
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV---------------- 186
EKL L GI L +L L VLDL G LR L V
Sbjct: 491 EKLSLLGCNGIDAGIGCLGNLPQLKVLDLSGTNTDSDSLRGLCVSQTIVSLNLSHCWKVT 550
Query: 187 ----LTKLEYLD---------------------------LWGSQVSNRGAAVLKMFPRLS 215
++ LE L+ L + +++R + L
Sbjct: 551 SVFHISALETLNELNLSDCIRINAGWEALEKLQQLHVAILSNTHITDRDISHFSKCKELV 610
Query: 216 FLNLAWT----GVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 271
L+L++ +T L NI++LE LNL ++ L+ L L L LN++
Sbjct: 611 TLDLSFCDELFDITSLSNITTLEDLNLDNCSKIRK------GLSVLGELPRLRVLNVKGV 664
Query: 272 QVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 330
++++ + L K + L L N L+DV+ LSSLS L L++ SG+G+
Sbjct: 665 HLTNSVIGSLGNGKSFVKLILDNCKGLSDVTF--LSSLSTLKELNLHHCDAVTSGIGTLG 722
Query: 331 PPRSLKLLDLHGGW 344
L++LDL GW
Sbjct: 723 RLLQLRVLDL--GW 734
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 144/317 (45%), Gaps = 38/317 (11%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
L SLN++ C+ +TS + A+ + L++L++ C VT +G ++ L LS T
Sbjct: 752 LVSLNLSHCKEITS--ISAIASLNALEKLNIDNCCHVT-SGWNVFGTLHQLRVAVLSNTR 808
Query: 152 LTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLK 209
+ + I +S ++L+ L+L +TD+ +L +T L L++ W + +G L
Sbjct: 809 INDENIRHISECKSLNTLNLAFCNDITDIT--ALSNITMLRELNIDWCFNIE-KGVEALG 865
Query: 210 MFPRLSFLNLAWTGVT-----KLPN---ISSLECLNL-----SFIQQVGAETDLV----- 251
P+L L+ G + + P SL LNL SF + T +V
Sbjct: 866 KLPKLRELDAKKCGTSVRWMQQYPYNTLFKSLVKLNLENGRESFCVGTLSSTAIVEELLL 925
Query: 252 ------LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQ 304
L + +L L LNL+ +V D L +S K L L++ N + +TD+S
Sbjct: 926 GRACEPYHLPPISSLRRLRVLNLDDGRVCDIWLEGISQSKSLQSLNVSNCNYITDIS--A 983
Query: 305 LSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA-ILQFCKMHPRIEV 363
LSSLS L L++ G +F+ L++ L W+ E +L CK +E+
Sbjct: 984 LSSLSTLEELNVNCCDRIRKGWEAFEALTRLRVATLSVTWVTNEGIRLLSGCKNLRNLEL 1043
Query: 364 W--HELSVICPSDQIGS 378
+ ++S I P + I S
Sbjct: 1044 YCCRDVSNIEPINNIKS 1060
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 119/284 (41%), Gaps = 61/284 (21%)
Query: 85 YLGAFRYLRSLNVADCRRVTSS------------ALWALTGMT---------C--LKELD 121
++ A L LN++DC R+ + A+ + T +T C L LD
Sbjct: 554 HISALETLNELNLSDCIRINAGWEALEKLQQLHVAILSNTHITDRDISHFSKCKELVTLD 613
Query: 122 LSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVL 181
LS C ++ D + L +I+TLE L L G+++L L L VL++ G+ +T+ V+
Sbjct: 614 LSFCDELFD--ITSLSNITTLEDLNLDNCSKIRKGLSVLGELPRLRVLNVKGVHLTNSVI 671
Query: 182 RSL-----------------------QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN 218
SL L+ L+ L+L G L +L L+
Sbjct: 672 GSLGNGKSFVKLILDNCKGLSDVTFLSSLSTLKELNLHHCDAVTSGIGTLGRLLQLRVLD 731
Query: 219 LAWTGV--TKLPNI----SSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ 272
L WT + L +I S L LNLS +++ S++A+ +LN LE+LN++
Sbjct: 732 LGWTKIDNNSLEDICACSSPLVSLNLSHCKEI-------TSISAIASLNALEKLNIDNCC 784
Query: 273 VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 316
+ T +L L N + D ++ +S L L++
Sbjct: 785 HVTSGWNVFGTLHQLRVAVLSNTRINDENIRHISECKSLNTLNL 828
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 71/137 (51%), Gaps = 6/137 (4%)
Query: 82 WMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIST 141
W+ + + L+SLNV++C +T + AL+ ++ L+EL+++ C ++ G + +++
Sbjct: 957 WLEGISQSKSLQSLNVSNCNYITD--ISALSSLSTLEELNVNCCDRIR-KGWEAFEALTR 1013
Query: 142 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLV-LRSLQVLTKLEYLDLWGSQV 200
L LS T +T +GI LLS +NL L+L D+ + + + LE L +
Sbjct: 1014 LRVATLSVTWVTNEGIRLLSGCKNLRNLEL--YCCRDVSNIEPINNIKSLEELTIQNCHN 1071
Query: 201 SNRGAAVLKMFPRLSFL 217
N G + M PRL L
Sbjct: 1072 INEGLLKVGMLPRLRVL 1088
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 134/309 (43%), Gaps = 48/309 (15%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDL-SR 124
N + ++L N +D + + A L L+V++C + + ++ + L+EL+L S
Sbjct: 229 NLKCLDLNSTN-IDDSCIGEISACAKLSKLSVSECNNIIDAT--PISQLAALEELNLNSN 285
Query: 125 C----------------------VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
C V V D +K L LE+L LS + I LS+
Sbjct: 286 CHITKGIGTLGMLLRLRMLDLSGVSVEDNFLKDLCDCGPLERLNLSYC-IQLTNINPLSN 344
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVS-------NRGAAVLKMFPRLS 215
+ L+L G + + L KL L + G +S G +++K+ S
Sbjct: 345 ATAIEELNLNGCRRITRGIGVVWALPKLRVLHMKGVHLSEPSLDSVGTGGSLVKV----S 400
Query: 216 FLNLAWTG-VTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVS 274
N A G +T L +I +LE LN IQ+ D++ + L L +L LN+++ +S
Sbjct: 401 LDNCAGFGDMTLLSSIVTLEELN---IQKCA---DIISGVCCLGTLPYLRVLNIKEAHIS 454
Query: 275 DATLFPLSTFKELIHLSLRNASLTDVS-LHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPR 333
+ K L+ L+L S+T +S + L+++ L LS+ ++G+G
Sbjct: 455 SLDFTGIGASKSLLQLTLE--SITGLSNVEALANILTLEKLSLLGCNGIDAGIGCLGNLP 512
Query: 334 SLKLLDLHG 342
LK+LDL G
Sbjct: 513 QLKVLDLSG 521
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 4/128 (3%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
E + L G + + W A L A LR LN++ R TS + ++ L L+L C
Sbjct: 1204 EELNLSGCYHIISGWEA-LTALPRLRVLNLSSTRVTTSYGGYYISRCKSLITLNLESC-D 1261
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
+TDA L I TLE+L + + G + L +L L +L+L +TD LR +Q+
Sbjct: 1262 MTDASC--LADIKTLEELHIGKCEELTRGFSALFTLPQLRILNLMDSLITDEDLREIQLS 1319
Query: 188 TKLEYLDL 195
+E L+L
Sbjct: 1320 HTIEDLNL 1327
>gi|449134939|ref|ZP_21770403.1| leucine-rich repeat domain protein [Rhodopirellula europaea 6C]
gi|448886418|gb|EMB16825.1| leucine-rich repeat domain protein [Rhodopirellula europaea 6C]
Length = 341
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 18/203 (8%)
Query: 130 DAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK 189
DA K + + L + +T +T DG ++L+ L L + L PVTD L ++ L K
Sbjct: 131 DAKAKSISGLPALIAVTFQDTSVTDDGASVLAELNELQDISLMNSPVTDKTLIAISTLPK 190
Query: 190 LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSFIQQV 244
L L+L G++++ + P L L LA T G+ + NI LE +NL ++ ++
Sbjct: 191 LTKLNLRGTKITGEAFEPISKLP-LEDLELAETDFGPEGMPAIANIEGLEKVNL-WLTKI 248
Query: 245 GAETDLVLSLTALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNASLTDVSLH 303
E SL A + L LN++ +++ + + + L L L S+ +L
Sbjct: 249 DNE-----SLKAFEGKTSLTALNIDNCPAITEEAIPVIVSLPHLKLLHLGKTSVAPDALP 303
Query: 304 QLSSLSKLTNLSIRDAVLTNSGL 326
QL L +L L + TN GL
Sbjct: 304 QLKPLQELETLFV-----TNLGL 321
>gi|423578883|ref|ZP_17554994.1| hypothetical protein IIA_00398, partial [Bacillus cereus VD014]
gi|401219577|gb|EJR26231.1| hypothetical protein IIA_00398, partial [Bacillus cereus VD014]
Length = 845
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 106/219 (48%), Gaps = 24/219 (10%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEK- 144
+ Y+ +L R + + A++ + LK +DL T ++ + I LE
Sbjct: 233 IAGLEYMTNLEKLTLRESNVTDISAISKLRSLKYVDL------TSNSIESIHPIGQLENI 286
Query: 145 --LWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
L+L + ++ + LS ++ + LDL G + D+ + L L+ ++ L L +Q+S+
Sbjct: 287 NMLFLRDNKIS--DLTPLSKMKKIKTLDLIGNNIKDI--QPLFTLSTMKQLYLANNQISD 342
Query: 203 RGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL-NLSFIQQVGAETDLVLSLTALQNLN 261
L RL+ + L W G K+ N+ S+ + NL ++ +E + ++ L L
Sbjct: 343 -----LNGIDRLNNVELLWIGNNKINNVESISKMSNLIELEIADSE---IKDISPLSQLG 394
Query: 262 HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 300
+L+ LNLE+ +SD + PLST L ++L ++DV
Sbjct: 395 NLQVLNLEENYISDIS--PLSTLTNLHEINLGANEISDV 431
>gi|421888174|ref|ZP_16319282.1| leucine-rich-repeat type III effector protein (GALA5) [Ralstonia
solanacearum K60-1]
gi|378966463|emb|CCF96030.1| leucine-rich-repeat type III effector protein (GALA5) [Ralstonia
solanacearum K60-1]
Length = 468
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 114/272 (41%), Gaps = 25/272 (9%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
L +L+V CR + L L L++SR ++ G++ L TL L +SE G
Sbjct: 125 LTALDVGRCR-IGPEEARELAASARLTTLNVSRN-RIGGEGVRALADCKTLTSLDVSENG 182
Query: 152 LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF 211
L L + + L+ L++ + R+L L LD+ G+ + + G L
Sbjct: 183 LGDAEAQRLGASERLTTLNVNRNRIDVPGARALAACKTLTSLDIGGNSIGDEGVDALVAN 242
Query: 212 PRLSFLNL-----AWTGVTKLPNISSLECLNL--SFIQQVGAET-DLVLSLTALQNLNH- 262
+L+ LN+ GV L + +L L + + I GA T +SLT L + +
Sbjct: 243 AQLTTLNVERAGVGAHGVQALADCKTLTSLRIDSNNIGDEGANTLAASISLTTLHSEGNG 302
Query: 263 --------------LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 308
L LNL V DA L L+ LS+R L+D +L++
Sbjct: 303 IGLAGAKALAANTMLTTLNLGHNSVGDAGAQALFANTTLVWLSVRRNGLSDAGAIRLAAS 362
Query: 309 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
LT L I D + ++G + R+L L++
Sbjct: 363 RTLTTLDIGDNAIKDAGARALAANRTLTTLNV 394
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 99/235 (42%), Gaps = 27/235 (11%)
Query: 117 LKELDLSRC-VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP 175
LKELDLSRC +T AG+ HL + L +L L+ + G L++ L+ LD+G
Sbjct: 76 LKELDLSRCRGGITAAGIAHLNRLP-LVRLNLNGNRIGLAGAQRLANHPTLTALDVGRCR 134
Query: 176 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLEC 235
+ R L +L L++ +++ G L L+ L+++ G
Sbjct: 135 IGPEEARELAASARLTTLNVSRNRIGGEGVRALADCKTLTSLDVSENG------------ 182
Query: 236 LNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 295
L + Q++GA L LN+ + ++ L+ K L L +
Sbjct: 183 LGDAEAQRLGAS-------------ERLTTLNVNRNRIDVPGARALAACKTLTSLDIGGN 229
Query: 296 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 350
S+ D + L + ++LT L++ A + G+ + ++L L + + E A
Sbjct: 230 SIGDEGVDALVANAQLTTLNVERAGVGAHGVQALADCKTLTSLRIDSNNIGDEGA 284
>gi|402562421|ref|YP_006605145.1| internalin protein [Bacillus thuringiensis HD-771]
gi|401791073|gb|AFQ17112.1| internalin protein [Bacillus thuringiensis HD-771]
Length = 1009
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 106/219 (48%), Gaps = 24/219 (10%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEK- 144
+ Y+ +L R + + A++ + LK +DL T ++ + I LE
Sbjct: 233 IAGLEYMTNLEKLTLRESNVTDISAISKLRSLKYVDL------TSNSIESIHPIGQLENI 286
Query: 145 --LWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
L+L + ++ + LS ++ + LDL G + D+ + L L+ ++ L L +Q+S+
Sbjct: 287 NMLFLRDNKIS--DLTPLSKMKKIKTLDLIGNNIKDI--QPLFTLSTMKQLYLANNQISD 342
Query: 203 RGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL-NLSFIQQVGAETDLVLSLTALQNLN 261
L RL+ + L W G K+ N+ S+ + NL ++ +E + ++ L L
Sbjct: 343 -----LNGIDRLNNVELLWIGNNKINNVESISKMSNLIELEIADSE---IKDISPLSQLG 394
Query: 262 HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 300
+L+ LNLE+ +SD + PLST L ++L ++DV
Sbjct: 395 NLQVLNLEENYISDIS--PLSTLTNLHEINLGANEISDV 431
>gi|887026|gb|AAA69527.1| internalin, partial [Listeria monocytogenes]
Length = 346
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 116/223 (52%), Gaps = 19/223 (8%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD + L +++TLE+L +S
Sbjct: 88 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LXPLANLTTLERLDIS 143
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 144 XNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIGT--L 197
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNL 268
L+ L+LA ++ L + L L ++ + + +++ L L L L L
Sbjct: 198 ASLTNLTDLDLANNQISNLAPLXGLTKL-----TELKLGANQISNISPLAGLTALTNLEL 252
Query: 269 EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 253 NENQLEDIS--PISNLKNLTYLTLYFNNISDIS--PVSSLTKL 291
Score = 41.6 bits (96), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 85/168 (50%), Gaps = 16/168 (9%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 215
I L++L NL+ L L +TD+ L+ LT L L+L + +S+ A + L +LS
Sbjct: 63 ITPLANLSNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 120
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
F N T + L N+++LE L++S + V ++ L L +LE L Q+SD
Sbjct: 121 FGN-QVTDLXPLANLTTLERLDISXNK--------VSDISVLAKLTNLESLIATNNQISD 171
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
T PL L LSL L D+ L+SL+ LT+L + + ++N
Sbjct: 172 IT--PLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 215
>gi|125538950|gb|EAY85345.1| hypothetical protein OsI_06723 [Oryza sativa Indica Group]
Length = 958
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 104/232 (44%), Gaps = 25/232 (10%)
Query: 82 WMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIST 141
W + LR L ++DC + + A +T L++LDLS V T + + T
Sbjct: 210 WAGVVSNLPSLRVLALSDCGLTAAPSPPARANLTRLQKLDLSTNVINTSSANSWFWDVPT 269
Query: 142 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVS 201
L L LS L+ L ++ NL VL+L G + ++ +LQ L L+ +DL + V+
Sbjct: 270 LTYLDLSGNALSGVFPDALGNMTNLRVLNLQGNDMVGMIPATLQRLCGLQVVDLTVNSVN 329
Query: 202 NRGAAVLKMFPR----------LSFLNLA-----WTGVTKLPNISSLECLNLSFIQQVGA 246
A ++ PR LS +N++ W G +S L L+LSF + G
Sbjct: 330 GDMAEFMRRLPRCVFGKLQVLQLSAVNMSGHLPKWIG-----EMSELTILDLSFNKLSG- 383
Query: 247 ETDLVLSLTALQNLNHLE-RLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 297
++ L + +L NL L NL +S+ L + E I LSL N S+
Sbjct: 384 --EIPLGIGSLSNLTRLFLHNNLLNGSLSEEHFADLVSL-EWIDLSLNNLSM 432
>gi|443716225|gb|ELU07850.1| hypothetical protein CAPTEDRAFT_25557, partial [Capitella teleta]
Length = 301
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 97/205 (47%), Gaps = 11/205 (5%)
Query: 141 TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 200
TL+ L LS+ L A + L++L NLSVL L G +T L R + L+ + L+ +++
Sbjct: 42 TLKDLVLSQCRLPAVPSSALTNLTNLSVLKLDGNAITTLDRRVFGTMPNLKEVHLYRNRI 101
Query: 201 SNRGAAVLKMFPRLSFLNLAWTGVTKLP-----NISSLECLNLSFIQQVGAETDLVLSLT 255
S A+ PRL L L +++LP +S+L L++S G +L T
Sbjct: 102 SRIDASAFHGLPRLEHLKLFENQLSRLPRKLFRKLSALVSLDIS-----GNRIRQILPRT 156
Query: 256 ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLS 315
Q LN L+ L +E +V+ L L +L L + L+ V+ S+ +L LS
Sbjct: 157 -FQGLNSLKWLEMESNRVTTLNRKVLRGMPLLRYLKLESNPLSRVAGATFQSVRRLNYLS 215
Query: 316 IRDAVLTNSGLGSFKPPRSLKLLDL 340
+ +L + +F+ LK L L
Sbjct: 216 LDITLLESLQNDTFRGLSKLKTLSL 240
>gi|423363694|ref|ZP_17341191.1| hypothetical protein IC1_05668, partial [Bacillus cereus VD022]
gi|401074678|gb|EJP83074.1| hypothetical protein IC1_05668, partial [Bacillus cereus VD022]
Length = 826
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 106/219 (48%), Gaps = 24/219 (10%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEK- 144
+ Y+ +L R + + A++ + LK +DL T ++ + I LE
Sbjct: 233 IAGLEYMTNLEKLTLRESNVTDISAISKLRSLKYVDL------TSNSIESIHPIGQLENI 286
Query: 145 --LWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
L+L + ++ + LS ++ + LDL G + D+ + L L+ ++ L L +Q+S+
Sbjct: 287 NMLFLRDNKIS--DLTPLSKMKKIKTLDLIGNNIKDI--QPLFTLSTMKQLYLANNQISD 342
Query: 203 RGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL-NLSFIQQVGAETDLVLSLTALQNLN 261
L RL+ + L W G K+ N+ S+ + NL ++ +E + ++ L L
Sbjct: 343 -----LNGIDRLNNVELLWIGNNKINNVESISKMSNLIELEIADSE---IKDISPLSQLG 394
Query: 262 HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 300
+L+ LNLE+ +SD + PLST L ++L ++DV
Sbjct: 395 NLQVLNLEENYISDIS--PLSTLTNLHEINLGANEISDV 431
>gi|355560886|gb|EHH17572.1| hypothetical protein EGK_14005, partial [Macaca mulatta]
Length = 712
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 133/286 (46%), Gaps = 21/286 (7%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLK--ELDLSRCVKVTDAGMKHLL-SISTLEK 144
F L++L++A CR T L L G C K LDLS C +++ G +++ S + +
Sbjct: 272 FHNLQNLSLAYCRGFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGITH 331
Query: 145 LWLSETGLTADGI--ALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQ-V 200
L +++ D AL+ ++ L G P ++D ++L KL + G++ V
Sbjct: 332 LTINDMPTLTDNCVKALVEKCSRITSLVFTGAPHISDRTFKALST-CKLRKIRFEGNKRV 390
Query: 201 SNRGAAVL-KMFPRLSFLNLA-WTGVT-----KLPNISSLECLNLSFIQQVGAETDLVLS 253
++ + K +P LS + +A G+T L + L LNL+ ++G + L
Sbjct: 391 TDASFKYIDKNYPNLSHIYMADCKGITDSSLRSLSPLRQLTVLNLANCVRIG-DMGLRQF 449
Query: 254 LTALQNLNHLERLNLEQ-TQVSDATLFPLST-FKELIHLSLRNAS-LTDVSLHQLSSLSK 310
L ++ + LNL ++SD ++ LS L +LSLRN LT + + ++
Sbjct: 450 LDGPASI-RIRELNLSNCVRLSDVSVMKLSERCPNLNYLSLRNCDHLTAQGIGYIVNIFS 508
Query: 311 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 356
L ++ + ++N GL + LK L + + +T+ I FCK
Sbjct: 509 LVSIDLSGTDISNEGLNVLSKHKKLKELSVSECYGITDVGIQAFCK 554
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 120/253 (47%), Gaps = 42/253 (16%)
Query: 117 LKELDLSRCVKVTDAGMKHLL-SISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 171
L+EL++S C TD M+H+ + L LS T +T + LL +LQNLS+
Sbjct: 224 LQELNVSDCPTFTDESMRHISEGCPGVLYLNLSNTTITNRTMRLLPRHFHNLQNLSLAYC 283
Query: 172 GGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWTGVTKL 227
G TD L+ L + KL YLDL G +Q+S +G ++ + TG+T L
Sbjct: 284 RGF--TDKGLQYLNLGNGCHKLIYLDLSGCTQISVQG---------FRYIANSCTGITHL 332
Query: 228 -----PNISSLECLNLSFIQQVGAETDLVL---------SLTALQNLNHLERLNLE-QTQ 272
P ++ C+ + +++ T LV + AL L ++ E +
Sbjct: 333 TINDMPTLTD-NCVK-ALVEKCSRITSLVFTGAPHISDRTFKALSTCK-LRKIRFEGNKR 389
Query: 273 VSDATL-FPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSF 329
V+DA+ + + L H+ + + +TD SL LS L +LT L++ + V + + GL F
Sbjct: 390 VTDASFKYIDKNYPNLSHIYMADCKGITDSSLRSLSPLRQLTVLNLANCVRIGDMGLRQF 449
Query: 330 -KPPRSLKLLDLH 341
P S+++ +L+
Sbjct: 450 LDGPASIRIRELN 462
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 113/237 (47%), Gaps = 21/237 (8%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV 128
I G V DA + + L + +ADC+ +T S+L +L+ + L L+L+ CV++
Sbjct: 382 IRFEGNKRVTDASFKYIDKNYPNLSHIYMADCKGITDSSLRSLSPLRQLTVLNLANCVRI 441
Query: 129 TDAGMKHLLSIST---LEKLWLSETGLTAD--GIALLSSLQNLSVLDLGGLP-VTDLVLR 182
D G++ L + +L LS +D + L NL+ L L +T +
Sbjct: 442 GDMGLRQFLDGPASIRIRELNLSNCVRLSDVSVMKLSERCPNLNYLSLRNCDHLTAQGIG 501
Query: 183 SLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA-WTGVTKLPNISS-------LE 234
+ + L +DL G+ +SN G VL +L L+++ G+T + I + LE
Sbjct: 502 YIVNIFSLVSIDLSGTDISNEGLNVLSKHKKLKELSVSECYGITDV-GIQAFCKSSLILE 560
Query: 235 CLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHL 290
L++S+ Q+ +D+++ A+ +N L L++ +++D+ + LS +H+
Sbjct: 561 HLDVSYCSQL---SDMIIKALAIYCIN-LTSLSVAGCPKITDSAMEMLSAKCHYLHI 613
>gi|119603706|gb|EAW83300.1| F-box and leucine-rich repeat protein 13, isoform CRA_c [Homo
sapiens]
Length = 806
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 131/281 (46%), Gaps = 21/281 (7%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLK--ELDLSRCVKVTDAGMKHLL-SISTLEK 144
F L++L++A CRR T L L G C K LDLS C +++ G +++ S + +
Sbjct: 385 FHNLQNLSLAYCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGIMH 444
Query: 145 LWLSETGLTADGIAL--LSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQ-V 200
L +++ D + ++ L G P ++D R+L KL + G++ V
Sbjct: 445 LTINDMPTLTDNCVKVGIEKCSRITSLVFTGAPHISDCTFRALSA-CKLRKIRFEGNKRV 503
Query: 201 SNRGAAVL-KMFPRLSFLNLA-WTGVT-----KLPNISSLECLNLSFIQQVGAETDLVLS 253
++ + K +P LS + +A G+T L + L LNL+ ++G + L
Sbjct: 504 TDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIG-DMGLKQF 562
Query: 254 LTALQNLNHLERLNLEQ-TQVSDATLFPLST-FKELIHLSLRNAS-LTDVSLHQLSSLSK 310
L ++ + LNL ++SDA++ LS L +LSLRN LT + + ++
Sbjct: 563 LDGPASM-RIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNIFS 621
Query: 311 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 351
L ++ + ++N GL + LK L + + +T+D I
Sbjct: 622 LVSIDLSGTDISNEGLNVLSRHKKLKELSVSECYRITDDGI 662
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 120/256 (46%), Gaps = 48/256 (18%)
Query: 117 LKELDLSRCVKVTDAGMKHLL-SISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 171
L+EL++S C TD M+H+ + L LS T +T + LL +LQNLS+
Sbjct: 337 LQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQNLSLAYC 396
Query: 172 GGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWTGVTKL 227
TD L+ L + KL YLDL G +Q+S +G ++ + TG+ L
Sbjct: 397 RRF--TDKGLQYLNLGNGCHKLIYLDLSGCTQISVQG---------FRYIANSCTGIMHL 445
Query: 228 -----PNISSLECLNLSFIQQVGAETDLVLS------------LTALQNLNHLERLNLE- 269
P ++ C+ + I++ T LV + L+A + L ++ E
Sbjct: 446 TINDMPTLTD-NCVKVG-IEKCSRITSLVFTGAPHISDCTFRALSACK----LRKIRFEG 499
Query: 270 QTQVSDATL-FPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGL 326
+V+DA+ F + L H+ + + +TD SL LS L +LT L++ + V + + GL
Sbjct: 500 NKRVTDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGL 559
Query: 327 GSF-KPPRSLKLLDLH 341
F P S+++ +L+
Sbjct: 560 KQFLDGPASMRIRELN 575
>gi|335307399|ref|XP_003360821.1| PREDICTED: F-box/LRR-repeat protein 2-like, partial [Sus scrofa]
Length = 319
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 108/208 (51%), Gaps = 18/208 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTC-LKELDLSRCVKVTDAGMKHLL-SISTLEKLWL 147
R + LN+ C ++T S ++L+ LK LDL+ CV +T++ +K + LE L L
Sbjct: 7 RNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSITNSSLKGISEGCRNLEYLNL 66
Query: 148 SETG-LTADGI-ALLSSLQNLSVLDLGGLP-VTDLVLRSLQ-VLTKLEYLDLWG-SQVSN 202
S +T DGI AL+ ++L L L G + D LR +Q +L L+L S++++
Sbjct: 67 SWCDQVTKDGIEALVRGCRSLRALLLRGCTQLEDEALRHIQNYCHELVSLNLQSCSRITD 126
Query: 203 RGAA-VLKMFPRLSFLNLAWTGVTKLPNIS----SLECLNLSFIQQVGAE--TDLVLSLT 255
G + + PRL L L +G + L + S +L C L ++ TD +L
Sbjct: 127 EGVVQICRGCPRLQALCL--SGCSNLTDASLTALALNCPRLQILEAARCSHLTDAGFTLL 184
Query: 256 ALQNLNHLERLNLEQTQ-VSDATLFPLS 282
A +N + LE+++LE+ ++D+TL LS
Sbjct: 185 A-RNCHDLEKMDLEECILITDSTLIQLS 211
>gi|290997297|ref|XP_002681218.1| leucine-rich repeat ribonuclease inhibitor family protein
[Naegleria gruberi]
gi|284094841|gb|EFC48474.1| leucine-rich repeat ribonuclease inhibitor family protein
[Naegleria gruberi]
Length = 342
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 101/219 (46%), Gaps = 10/219 (4%)
Query: 111 LTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLD 170
+T M L L++ R ++ D G K++ + L L + E + +G +S ++ L+ LD
Sbjct: 124 VTEMKQLTSLNI-RGNRIGDEGAKYISEMKQLTSLNIRENEIGDEGAKFISEMKQLTSLD 182
Query: 171 LGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT--GVTKLP 228
+ G + D + + + +L L+++ + + GA + +L+ LN+ + G+
Sbjct: 183 IRGNRIGDEGAKYISEMKQLTSLNIYYTLIGIEGAKFISEMKQLTLLNIYYNLIGIEGAK 242
Query: 229 NISSLECLNLSFI--QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 286
IS ++ L L I ++G E +S + L LN+ ++ D +S K+
Sbjct: 243 FISEMKQLTLLDISNNEIGIEGAKFIS-----EMKQLTSLNINYNEIGDRGAKFISEMKQ 297
Query: 287 LIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 325
L L++ D +S + +LT+L I + + + G
Sbjct: 298 LTSLNISYNITGDRGAKFISEMKQLTSLDISNNRICDEG 336
>gi|434373600|ref|YP_006608244.1| internalin protein [Bacillus thuringiensis HD-789]
gi|401872157|gb|AFQ24324.1| internalin protein [Bacillus thuringiensis HD-789]
Length = 1009
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 106/219 (48%), Gaps = 24/219 (10%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEK- 144
+ Y+ +L R + + A++ + LK +DL T ++ + I LE
Sbjct: 233 IAGLEYMTNLEKLTLRESNVTDISAISKLRSLKYVDL------TSNSIESIHPIGQLENI 286
Query: 145 --LWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
L+L + ++ + LS ++ + LDL G + D+ + L L+ ++ L L +Q+S+
Sbjct: 287 NMLFLRDNKIS--DLTPLSKMKKIKTLDLIGNNIKDI--QPLFTLSTMKQLYLANNQISD 342
Query: 203 RGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL-NLSFIQQVGAETDLVLSLTALQNLN 261
L RL+ + L W G K+ N+ S+ + NL ++ +E + ++ L L
Sbjct: 343 -----LNGIDRLNNVELLWIGNNKINNVESISKMSNLIELEIADSE---IKDISPLSQLG 394
Query: 262 HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 300
+L+ LNLE+ +SD + PLST L ++L ++DV
Sbjct: 395 NLQVLNLEENYISDIS--PLSTLTNLHEINLGANEISDV 431
>gi|237795193|ref|YP_002862745.1| putative surface protein [Clostridium botulinum Ba4 str. 657]
gi|229260764|gb|ACQ51797.1| putative surface protein [Clostridium botulinum Ba4 str. 657]
Length = 1355
Score = 52.4 bits (124), Expect = 5e-04, Method: Composition-based stats.
Identities = 60/256 (23%), Positives = 123/256 (48%), Gaps = 30/256 (11%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
++++ + L L++A+ V L L L++LD++ C ++ + H+ I
Sbjct: 504 ISFVSSLEKLEYLSIANTDVVNIDVLKNLIN---LRKLDITGCAQINTQVLNHVEIIGN- 559
Query: 143 EKLWLSETGLTADGIALLSS---------LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
E + + L + L+++ L +++ L+L G + DL + L+ + L YL
Sbjct: 560 EIVNFGDKVLEREIRELINNYSEPIYKRQLSSITKLELSGRGIVDL--QGLESMENLTYL 617
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLS 253
DL +++SN + +L L K+ +I S+E +L +++++ +L+
Sbjct: 618 DLSNNEISN-----IDSIKKLVNLKKLVLHKNKIGSIKSIE--SLKYLEELDLSNNLIGD 670
Query: 254 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 313
+TAL L+ L RL+L + + ++ L + L +LSL +++ + L KL
Sbjct: 671 ITALGGLSQLTRLDLSRNGI--VSINSLGSLINLQYLSLYENKISEGEEY----LKKL-- 722
Query: 314 LSIRDAVLTNSGLGSF 329
S+R+ L NSG+ +F
Sbjct: 723 YSLRELYLKNSGVSNF 738
Score = 44.7 bits (104), Expect = 0.084, Method: Composition-based stats.
Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 16/171 (9%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N +I LRG + E + L R L L++ R + ++L+ + +T L+ L L+
Sbjct: 829 NLHSINLRGHGKL--EGLENLIPIRGLIKLDLQG-REINYTSLYYIKYLTSLRYLYLNNM 885
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
D + L +++ L L LS TG++ I++L L+NLS L LGG + D L SL+
Sbjct: 886 NLTGD--LSFLENLTDLRILDLSRTGIS--NISILDKLRNLSELYLGGNNIID--LSSLE 939
Query: 186 VLTKLEYLDLWGSQVSNRGAA---VLKMFPRLSFLNLAWTGVTKLPNISSL 233
LT L LDL V N L+ L +L L T K+ + S++
Sbjct: 940 NLTNLVKLDL----VENNDITSIYALRNLINLRYLTLPITNPKKIQDYSAV 986
>gi|325108768|ref|YP_004269836.1| hypothetical protein Plabr_2212 [Planctomyces brasiliensis DSM
5305]
gi|324969036|gb|ADY59814.1| hypothetical protein Plabr_2212 [Planctomyces brasiliensis DSM
5305]
Length = 268
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 124 RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRS 183
R +TDAG+ HL + +L +L L +TG+T G+ L+ L L L+L ++D L+
Sbjct: 77 RGTAITDAGLAHLSGLDSLSRLHLEKTGITDAGLKHLTGLNKLEYLNLYDTKISDAGLQQ 136
Query: 184 LQVLTKLEYLDLWGSQVSNRGAAVLK-MFPRLSFLN 218
L L L+ L +W +QV+ G L+ P L+ ++
Sbjct: 137 LAALKGLKKLYVWQTQVTWDGVKKLQEQRPELTIIS 172
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 55/102 (53%), Gaps = 8/102 (7%)
Query: 134 KHLLSISTLEKLWLSE---TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKL 190
K + +S L +++L T +T G+A LS L +LS L L +TD L+ L L KL
Sbjct: 60 KSIQPVSELTQVYLVNLRGTAITDAGLAHLSGLDSLSRLHLEKTGITDAGLKHLTGLNKL 119
Query: 191 EYLDLWGSQVSNRG---AAVLKMFPRLSF--LNLAWTGVTKL 227
EYL+L+ +++S+ G A LK +L + W GV KL
Sbjct: 120 EYLNLYDTKISDAGLQQLAALKGLKKLYVWQTQVTWDGVKKL 161
Score = 41.6 bits (96), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Query: 239 SFIQQVGAETDLVLSLTALQNLNHLE-RLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 297
+ + +V A V+ L QN + LE +L + ++SD ++ P+S ++ ++LR ++
Sbjct: 24 AAVSKVEANGGRVMKLA--QNDDRLEVTFHLAEGEISDKSIQPVSELTQVYLVNLRGTAI 81
Query: 298 TDVSLHQLSSLSKLTNLSIRDAVLTNSGL 326
TD L LS L L+ L + +T++GL
Sbjct: 82 TDAGLAHLSGLDSLSRLHLEKTGITDAGL 110
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%)
Query: 253 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 312
S+ + L + +NL T ++DA L LS L L L +TD L L+ L+KL
Sbjct: 61 SIQPVSELTQVYLVNLRGTAITDAGLAHLSGLDSLSRLHLEKTGITDAGLKHLTGLNKLE 120
Query: 313 NLSIRDAVLTNSGL 326
L++ D ++++GL
Sbjct: 121 YLNLYDTKISDAGL 134
>gi|343414367|emb|CCD21012.1| leucine-rich repeat protein, putative [Trypanosoma vivax Y486]
Length = 1699
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 126/239 (52%), Gaps = 29/239 (12%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
++ L LR+L+++ C +T+ + L+ ++ L++LDLS C VTD + L + L
Sbjct: 765 VSPLSELSSLRTLDLSHCTDITN--VSPLSKISTLQKLDLSHCTGVTD--VSPLSKMIGL 820
Query: 143 EKLWLSE-TGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDL-WGSQ 199
EKL+LS TG+T + LS L +L +LDL +TD + L L+ L LDL +
Sbjct: 821 EKLYLSHCTGIT--DVPPLSELSSLRMLDLSHCTGITD--VSPLSELSSLHTLDLSHCTG 876
Query: 200 VSNRGAAVLKMFPRLSFLNLA-WTGVTK---LPNISSLECLNLSFIQQVGAETDLVLSLT 255
+++ + L L L+L+ TG+T L +SSL L+LS + TD ++
Sbjct: 877 ITD--VSPLSELSSLRTLDLSHCTGITDVSPLSELSSLRTLDLSHCTGI---TD----VS 927
Query: 256 ALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNAS-LTDVS-LHQLSSLSKL 311
L L+ L L+L T ++D + PLS L L L + + +TDVS L +LSSL L
Sbjct: 928 PLSELSSLRTLDLSHCTGITDVS--PLSKLSSLRTLDLSHCTGITDVSPLSELSSLRTL 984
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 120/236 (50%), Gaps = 23/236 (9%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
++ L LR+L+++ C +T + L+ ++ L+ LDLS C +TD + L +S+L
Sbjct: 1363 VSPLSELSSLRTLDLSHCTGITD--VSPLSKLSSLRTLDLSHCTGITD--VSPLSVLSSL 1418
Query: 143 EKLWLSE-TGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDL-WGSQ 199
L LS TG+T ++ LS L +L LDL +TD + L L+ L LDL +
Sbjct: 1419 RTLGLSHCTGIT--DVSPLSELSSLRTLDLSHCTGITD--VSPLSELSSLRTLDLSHCTG 1474
Query: 200 VSNRGAAVLKMFPRLSFLNLA-WTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQ 258
+++ + L +F L L L+ TG+T + +S L L + TD ++ L
Sbjct: 1475 ITD--VSPLSVFSSLRTLGLSHCTGITDVSPLSELSNLRTLDLSHCTGITD----VSPLS 1528
Query: 259 NLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNAS-LTDVS-LHQLSSLSKL 311
L+ L L+L T ++D + PLS L L L + + +TDVS L +LSSL L
Sbjct: 1529 ELSSLRTLDLSHCTGITDVS--PLSELSSLRTLDLSHCTGITDVSPLSKLSSLRTL 1582
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 123/239 (51%), Gaps = 29/239 (12%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
++ L LR+L+++ C +T + L+ ++ L+ LDLS C +TD + L +S+L
Sbjct: 972 VSPLSELSSLRTLDLSHCTGITD--VSPLSKLSSLRTLDLSHCTGITD--VSPLSELSSL 1027
Query: 143 EKLWLSE-TGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDL-WGSQ 199
L LS TG+T ++ LS L +L LDL +TD + L L+ L LDL +
Sbjct: 1028 RTLDLSHCTGIT--DVSPLSELSSLRTLDLSHCTGITD--VSPLSKLSSLRTLDLSHCTG 1083
Query: 200 VSNRGAAVLKMFPRLSFLNLA-WTGVTK---LPNISSLECLNLSFIQQVGAETDLVLSLT 255
+++ + L L L+L+ TG+T L +SSL L+LS + TD ++
Sbjct: 1084 ITD--VSPLSELSSLRTLDLSHCTGITDVSPLSELSSLRTLDLSHCTGI---TD----VS 1134
Query: 256 ALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNAS-LTDVS-LHQLSSLSKL 311
L L+ L L+L T ++D + PLS L L L + + +TDVS L +LSSL L
Sbjct: 1135 PLSELSSLRTLDLSHCTGITDVS--PLSELSSLRTLDLSHCTGITDVSPLSKLSSLCTL 1191
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 103/214 (48%), Gaps = 25/214 (11%)
Query: 107 ALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNL 166
L L G CL+ LDLS C +TD + L +S L L LS GI +S L NL
Sbjct: 350 TLRDLDGNECLRTLDLSHCTGITDVSL--LSKLSGLHTLGLSH----CTGITDVSPLSNL 403
Query: 167 SVLDLGGLP----VTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLA- 220
S L + GL +TD + L L+ L L L + +++ + L +F L L ++
Sbjct: 404 SGLRMLGLSHCTGITD--VSPLSELSSLRTLGLSHCTGITD--VSPLSVFSSLRTLGISH 459
Query: 221 WTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQ-TQVSDATLF 279
TG+T + +S + L ++ TD + L L+ E+L+L T ++D +
Sbjct: 460 CTGITDVSPLSKMNGLQKLYLSHCTGITD----VPPLSALSSFEKLDLSHCTGITDVS-- 513
Query: 280 PLSTFKELIHLSLRNAS-LTDVS-LHQLSSLSKL 311
PLS L L + + + +TDVS L +++ L KL
Sbjct: 514 PLSVLSSLRTLDISHCTGITDVSPLSKMNGLQKL 547
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 123/239 (51%), Gaps = 29/239 (12%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
++ L LR+L+++ C +T + L+ ++ L+ LDLS C +T+ + L ISTL
Sbjct: 742 VSPLSELSSLRTLDISHCTGITD--VSPLSELSSLRTLDLSHCTDITN--VSPLSKISTL 797
Query: 143 EKLWLSE-TGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDL-WGSQ 199
+KL LS TG+T ++ LS + L L L +TD + L L+ L LDL +
Sbjct: 798 QKLDLSHCTGVT--DVSPLSKMIGLEKLYLSHCTGITD--VPPLSELSSLRMLDLSHCTG 853
Query: 200 VSNRGAAVLKMFPRLSFLNLA-WTGVTK---LPNISSLECLNLSFIQQVGAETDLVLSLT 255
+++ + L L L+L+ TG+T L +SSL L+LS + TD ++
Sbjct: 854 ITD--VSPLSELSSLHTLDLSHCTGITDVSPLSELSSLRTLDLSHCTGI---TD----VS 904
Query: 256 ALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNAS-LTDVS-LHQLSSLSKL 311
L L+ L L+L T ++D + PLS L L L + + +TDVS L +LSSL L
Sbjct: 905 PLSELSSLRTLDLSHCTGITDVS--PLSELSSLRTLDLSHCTGITDVSPLSKLSSLRTL 961
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 111/234 (47%), Gaps = 42/234 (17%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
++ L LR+L+++ C +T + L+ ++ L+ LDLS C +TD + L +S+L
Sbjct: 1018 VSPLSELSSLRTLDLSHCTGITD--VSPLSELSSLRTLDLSHCTGITD--VSPLSKLSSL 1073
Query: 143 EKLWLSE-TGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQV 200
L LS TG+T ++ LS L +L LDL +TD + L L+ L LDL
Sbjct: 1074 RTLDLSHCTGIT--DVSPLSELSSLRTLDLSHCTGITD--VSPLSELSSLRTLDLSHCT- 1128
Query: 201 SNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNL 260
T V+ L +SSL L+LS + TD ++ L L
Sbjct: 1129 -------------------GITDVSPLSELSSLRTLDLSHCTGI---TD----VSPLSEL 1162
Query: 261 NHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNAS-LTDVS-LHQLSSLSKL 311
+ L L+L T ++D + PLS L L L + + +TDVS L +LSSL L
Sbjct: 1163 SSLRTLDLSHCTGITDVS--PLSKLSSLCTLELSHCTGITDVSPLSELSSLRTL 1214
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 134/288 (46%), Gaps = 50/288 (17%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
++ L LR+L+++ C +T + L+ M L++L LS C +TD + L ++S+
Sbjct: 512 VSPLSVLSSLRTLDISHCTGITD--VSPLSKMNGLQKLYLSHCTGITD--VPPLSALSSF 567
Query: 143 EKLWLSE-TGLTADGIALLSSLQNLSVLDL----GGLPVTDLV----LRSLQV------- 186
EKL LS TG+T ++ LS L +L LDL G V+ L+ LR L +
Sbjct: 568 EKLDLSHCTGIT--DVSPLSKLSSLHTLDLSHCTGITNVSPLLKFSSLRMLDISHCTGIT 625
Query: 187 -------LTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLA-WTGVTKLPNISSLECLN 237
L+ L LDL + +++ + L F L L+L+ TG+T + +S L
Sbjct: 626 NVSPLSELSSLRTLDLSHCTGITD--VSPLSKFSSLHTLDLSHCTGITNVSPLSKFSSLR 683
Query: 238 LSFIQQVGAETDLVLSLTALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNAS 296
+ I T+ ++ L L+ L L+L T ++D + PLS L L + +
Sbjct: 684 MLDISHCTGITN----VSPLSKLSSLHTLDLSHCTGITDVS--PLSKLSSLRTLDFSHCT 737
Query: 297 -LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP---PRSLKLLDL 340
+T+VS LS LS L L I +G+ P SL+ LDL
Sbjct: 738 GITNVS--PLSELSSLRTLDISHC----TGITDVSPLSELSSLRTLDL 779
>gi|226949026|ref|YP_002804117.1| leucine rich repeat-containing protein [Clostridium botulinum A2
str. Kyoto]
gi|226842584|gb|ACO85250.1| leucine rich repeat protein [Clostridium botulinum A2 str. Kyoto]
Length = 1355
Score = 52.4 bits (124), Expect = 5e-04, Method: Composition-based stats.
Identities = 60/256 (23%), Positives = 123/256 (48%), Gaps = 30/256 (11%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
++++ + L L++A+ V L L L++LD++ C ++ + H+ I
Sbjct: 504 ISFVSSLEKLEYLSIANTDVVNIDVLKNLIN---LRKLDITGCAQINTQVLNHVEIIGN- 559
Query: 143 EKLWLSETGLTADGIALLSS---------LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
E + + L + L+++ L +++ L+L G + DL + L+ + L YL
Sbjct: 560 EIVNFGDKVLEREIRELINNYSEPIYKRQLSSITKLELSGRGIVDL--QGLESMENLTYL 617
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLS 253
DL +++SN + +L L K+ +I S+E +L +++++ +L+
Sbjct: 618 DLSNNEISN-----IDSIKKLVNLKKLVLHKNKIGSIKSIE--SLKYLEELDLSNNLIGD 670
Query: 254 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 313
+TAL L+ L RL+L + + ++ L + L +LSL +++ + L KL
Sbjct: 671 ITALGGLSQLTRLDLSRNGI--VSINSLGSLINLQYLSLYENKISEGEEY----LKKL-- 722
Query: 314 LSIRDAVLTNSGLGSF 329
S+R+ L NSG+ +F
Sbjct: 723 YSLRELYLKNSGVSNF 738
Score = 44.7 bits (104), Expect = 0.087, Method: Composition-based stats.
Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 16/171 (9%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N +I LRG + E + L R L L++ R + ++L+ + +T L+ L L+
Sbjct: 829 NLHSINLRGHGKL--EGLENLIPIRGLIKLDLQG-REINYTSLYYIKYLTSLRYLYLNNM 885
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
D + L +++ L L LS TG++ I++L L+NLS L LGG + D L SL+
Sbjct: 886 NLTGD--LSFLENLTDLRILDLSRTGIS--NISILDKLRNLSELYLGGNNIID--LSSLE 939
Query: 186 VLTKLEYLDLWGSQVSNRGAA---VLKMFPRLSFLNLAWTGVTKLPNISSL 233
LT L LDL V N L+ L +L L T K+ + S++
Sbjct: 940 NLTNLVKLDL----VENNDITSIYALRNLINLRYLTLPITNPKKIQDYSAV 986
>gi|168180355|ref|ZP_02615019.1| putative surface protein [Clostridium botulinum NCTC 2916]
gi|182668743|gb|EDT80721.1| putative surface protein [Clostridium botulinum NCTC 2916]
Length = 1355
Score = 52.4 bits (124), Expect = 5e-04, Method: Composition-based stats.
Identities = 60/256 (23%), Positives = 123/256 (48%), Gaps = 30/256 (11%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
++++ + L L++A+ V L L L++LD++ C ++ + H+ I
Sbjct: 504 ISFVSSLEKLEYLSIANTDVVNIDVLKNLIN---LRKLDITGCAQINTQVLNHVEIIGN- 559
Query: 143 EKLWLSETGLTADGIALLSS---------LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
E + + L + L+++ L +++ L+L G + DL + L+ + L YL
Sbjct: 560 EIVNFGDKVLEREIRELINNYSEPIYKRQLSSITKLELSGRGIVDL--QGLESMENLTYL 617
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLS 253
DL +++SN + +L L K+ +I S+E +L +++++ +L+
Sbjct: 618 DLSNNEISN-----IDSIKKLVNLKKLVLHKNKIGSIKSIE--SLKYLEELDLSNNLIGD 670
Query: 254 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 313
+TAL L+ L RL+L + + ++ L + L +LSL +++ + L KL
Sbjct: 671 ITALGGLSQLTRLDLSRNGI--VSINSLGSLINLQYLSLYENKISEGEEY----LKKL-- 722
Query: 314 LSIRDAVLTNSGLGSF 329
S+R+ L NSG+ +F
Sbjct: 723 YSLRELYLKNSGVSNF 738
Score = 44.7 bits (104), Expect = 0.089, Method: Composition-based stats.
Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 16/171 (9%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N +I LRG + E + L R L L++ R + ++L+ + +T L+ L L+
Sbjct: 829 NLHSINLRGHGKL--EGLENLIPIRGLIKLDLQG-REINYTSLYYIKYLTSLRYLYLNNM 885
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
D + L +++ L L LS TG++ I++L L+NLS L LGG + D L SL+
Sbjct: 886 NLTGD--LSFLENLTDLRILDLSRTGIS--NISILDKLRNLSELYLGGNNIID--LSSLE 939
Query: 186 VLTKLEYLDLWGSQVSNRGAA---VLKMFPRLSFLNLAWTGVTKLPNISSL 233
LT L LDL V N L+ L +L L T K+ + S++
Sbjct: 940 NLTNLVKLDL----VENNDITSIYALRNLINLRYLTLPITNPKKIQDYSAV 986
>gi|887874|gb|AAA69536.1| internalin, partial [Listeria monocytogenes]
Length = 344
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 117/223 (52%), Gaps = 19/223 (8%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L L +VTD +K L +++TLE+L +S
Sbjct: 86 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSLGN--QVTD--LKPLANLTTLERLDIS 141
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT + L L G+Q+ + G L
Sbjct: 142 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNWDELSLNGNQLKDIGT--L 195
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNL 268
L+ L+LA ++ L + L L ++ + + +++ L L L L L
Sbjct: 196 ASLTNLTDLDLANNQISNLAPLRGLTKL-----TELKLGANQISNISPLAGLTALTNLEL 250
Query: 269 EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 251 NENQLEDIS--PISNLKNLTYLTLYFNNISDIS--PVSSLTKL 289
>gi|334121440|ref|ZP_08495509.1| leucine-rich repeat-containing protein [Microcoleus vaginatus
FGP-2]
gi|333455058|gb|EGK83722.1| leucine-rich repeat-containing protein [Microcoleus vaginatus
FGP-2]
Length = 336
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 136/263 (51%), Gaps = 23/263 (8%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
++ L +F L +L + R+ S L L +T LK L + +++D + L S+ L
Sbjct: 60 ISPLSSFTKLTNL-ILGSNRI--SDLAPLQSLTNLKTL-IMDVNQISD--ISPLSSLINL 113
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
+L L +T +D I+ L+ L NL+ L L ++D+ LQ LT L L L+ +Q+S+
Sbjct: 114 SQLVL-DTNQISD-ISPLAGLTNLTALVLFDNKISDIT--PLQALTNLNALILYNNQISD 169
Query: 203 RGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNH 262
A L L L L ++ + +SSL+ NL+ + G + + L +L NLN
Sbjct: 170 --LAPLTNLTALDTLYLYNNKISDITRLSSLK--NLTTLFLFGNKISDITPLASLTNLN- 224
Query: 263 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 322
+L L Q Q+SD + PL++ LI L+L N ++D+S L SL+ LT L + + ++
Sbjct: 225 --KLVLFQNQISDIS--PLTSLTNLIELNLGNNQISDIS--PLKSLTNLTELYLFNNPIS 278
Query: 323 NSGLGSFKPPRSLKLLDLHGGWL 345
++ + + +L LLDL+ +
Sbjct: 279 DT--SALQALNNLFLLDLYNNQI 299
>gi|242067197|ref|XP_002448875.1| hypothetical protein SORBIDRAFT_05g000740 [Sorghum bicolor]
gi|241934718|gb|EES07863.1| hypothetical protein SORBIDRAFT_05g000740 [Sorghum bicolor]
Length = 691
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 121/254 (47%), Gaps = 24/254 (9%)
Query: 90 RYLRSLNVADCRRVTSSALWAL-TGMTCLKELDLSRCVKVTDAGMKHL-LSISTLEKLWL 147
+ LR L++A + +T L + G L+EL L C+ V+D G++ L L L L L
Sbjct: 174 KGLRRLSLARWKPLTDMGLGCVAVGCMELRELSLKWCLGVSDLGIQLLALKCRKLTSLDL 233
Query: 148 SETGLTADGIALLSSLQNLSVLDL-GGLPVTDLVLRSLQ--VLTKLEYLDLWGSQ-VSNR 203
S T +T D + L NL L L G + + D L SLQ L+ LDL Q +++
Sbjct: 234 SYTMITKDSFPPIMKLPNLQELTLVGCIGIDDDALGSLQKECSKSLQVLDLSHCQNITDV 293
Query: 204 G-AAVLKMFPRLSFLNLAWT---------GVTKLPNISSLECLNLSFIQQVGAETDLVLS 253
G +++LK+ P L L+L++ K+P + +L+ F+ V + S
Sbjct: 294 GVSSILKLVPNLFELDLSYCCPVTPSMVRSFQKIPKLRTLKLEGCKFM--VDGLKAIGTS 351
Query: 254 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQL-SSLSKL 311
+L+ LN + + T+ S F +S K L+ L + ++TDVSL + SS + L
Sbjct: 352 CVSLKELNLSKCSGMTDTEFS----FAMSRLKNLLKLDITCCRNITDVSLAAMTSSCTSL 407
Query: 312 TNLSIRDAVLTNSG 325
+L + +SG
Sbjct: 408 ISLRMESCSRVSSG 421
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 130/263 (49%), Gaps = 19/263 (7%)
Query: 79 DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTG-MTCLKELDLSRCVKVTDAGM---- 133
D E+ + + L L++ CR +T +L A+T T L L + C +V+ +
Sbjct: 368 DTEFSFAMSRLKNLLKLDITCCRNITDVSLAAMTSSCTSLISLRMESCSRVSSGALQLIG 427
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLG-GLPVTDLVLRSL-QVLTKLE 191
KH S LE+L L+++ L +G+ LS LS L +G L ++D L + + L
Sbjct: 428 KH---CSHLEQLDLTDSDLDDEGLKALSRCGKLSSLKIGICLKISDEGLTHIGRSCPNLR 484
Query: 192 YLDLW--GSQVSNRGAAVLKMFPRLSFLNLAW-TGVTKLPNISSLECLNLSFIQQVGAE- 247
+DL+ G + + + P L +NL++ T +T IS +C L+ ++ G
Sbjct: 485 DIDLYRCGGLSDDGIIPIAQGCPMLESINLSYCTEITDRSLISLSKCTKLNTLEIRGCPM 544
Query: 248 -TDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPLSTFKE-LIHLSLRNASLTDVSLHQ 304
T LS A+ L +L++++ +V+D + LS F L ++L S+TD+ L
Sbjct: 545 ITSTGLSEIAM-GCRLLSKLDIKKCFEVNDVGMLYLSQFSHSLREINLSYCSVTDIGLLS 603
Query: 305 LSSLSKLTNLSIRD-AVLTNSGL 326
LSS+S L N++I A +T +GL
Sbjct: 604 LSSISGLQNMTIVHLAGITPNGL 626
>gi|47848049|dbj|BAD21834.1| putative HcrVf2 protein [Oryza sativa Japonica Group]
Length = 960
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 104/232 (44%), Gaps = 25/232 (10%)
Query: 82 WMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIST 141
W + LR L ++DC + + A +T L++LDLS V T + + T
Sbjct: 212 WAGVVSNLPSLRVLALSDCGLTAAPSPPARANLTRLQKLDLSTNVINTSSANSWFWDVPT 271
Query: 142 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVS 201
L L LS L+ L ++ NL VL+L G + ++ +LQ L L+ +DL + V+
Sbjct: 272 LTYLDLSGNALSGVFPDALGNMTNLRVLNLQGNDMVGMIPATLQRLCGLQVVDLTVNSVN 331
Query: 202 NRGAAVLKMFPR----------LSFLNLA-----WTGVTKLPNISSLECLNLSFIQQVGA 246
A ++ PR LS +N++ W G +S L L+LSF + G
Sbjct: 332 GDMAEFMRRLPRCVFGKLQVLQLSAVNMSGHLPKWIG-----EMSELTILDLSFNKLSG- 385
Query: 247 ETDLVLSLTALQNLNHLE-RLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 297
++ L + +L NL L NL +S+ L + E I LSL N S+
Sbjct: 386 --EIPLGIGSLSNLTRLFLHNNLLNGSLSEEHFADLVSL-EWIDLSLNNLSM 434
>gi|290987030|ref|XP_002676226.1| predicted protein [Naegleria gruberi]
gi|284089827|gb|EFC43482.1| predicted protein [Naegleria gruberi]
Length = 298
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 109/266 (40%), Gaps = 48/266 (18%)
Query: 83 MAYLGAFRYLRSLNVAD-CRRVTSSALWALTGM---TCLKELDLSRCVK----------- 127
+ Y+ + LR LN+ D C T L +++ M TCLK DL C +
Sbjct: 17 LKYISELKNLRILNIHDPCFTFTRYGLESISEMPKLTCLKVRDLKICNEGVNWISQSTQL 76
Query: 128 --------VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDL 179
D G++ L + L LWL A+ + L+ L L+ L++ + D
Sbjct: 77 TDLDFTTCTLDQGLESLCEMKRLTSLWLPSCPKYANKVELIGQLTQLTSLNICARGINDQ 136
Query: 180 VLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLS 239
++ LT+L LD+ +Q+ + + + +++L LN+S
Sbjct: 137 DGVHIKELTQLTELDISLNQI-------------------VFETIESISQLTNLIILNMS 177
Query: 240 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 299
+ L+ L+ L+ L L+ L ++DA + +S K LI L + N ++
Sbjct: 178 YCNIGDDGACLIGELSQLRELKVLKNL------ITDAGVISISQLKHLIKLDISNNEISK 231
Query: 300 VSLHQLSSLSKLTNLSIRDAVLTNSG 325
+S L LT L+I ++ + G
Sbjct: 232 TGAESISGLRNLTYLNIGYNLIGDEG 257
>gi|109067712|ref|XP_001085008.1| PREDICTED: f-box/LRR-repeat protein 13 isoform 4 [Macaca mulatta]
gi|109067714|ref|XP_001085241.1| PREDICTED: f-box/LRR-repeat protein 13 isoform 6 [Macaca mulatta]
Length = 735
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 133/286 (46%), Gaps = 21/286 (7%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLK--ELDLSRCVKVTDAGMKHLL-SISTLEK 144
F L++L++A CR T L L G C K LDLS C +++ G +++ S + +
Sbjct: 295 FHNLQNLSLAYCRGFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGITH 354
Query: 145 LWLSETGLTADGI--ALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQ-V 200
L +++ D AL+ ++ L G P ++D ++L KL + G++ V
Sbjct: 355 LTINDMPTLTDNCVKALVEKCSRITSLVFTGAPHISDRTFKALST-CKLRKIRFEGNKRV 413
Query: 201 SNRGAAVL-KMFPRLSFLNLA-WTGVT-----KLPNISSLECLNLSFIQQVGAETDLVLS 253
++ + K +P LS + +A G+T L + L LNL+ ++G + L
Sbjct: 414 TDASFKYIDKNYPNLSHIYMADCKGITDSSLRSLSPLRQLTVLNLANCVRIG-DMGLRQF 472
Query: 254 LTALQNLNHLERLNLEQ-TQVSDATLFPLST-FKELIHLSLRNAS-LTDVSLHQLSSLSK 310
L ++ + LNL ++SD ++ LS L +LSLRN LT + + ++
Sbjct: 473 LDGPASI-RIRELNLSNCVRLSDVSVMKLSERCPNLNYLSLRNCDHLTAQGIGYIVNIFS 531
Query: 311 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 356
L ++ + ++N GL + LK L + + +T+ I FCK
Sbjct: 532 LVSIDLSGTDISNEGLNVLSKHKKLKELSVSECYGITDVGIQAFCK 577
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 120/253 (47%), Gaps = 42/253 (16%)
Query: 117 LKELDLSRCVKVTDAGMKHLL-SISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 171
L+EL++S C TD M+H+ + L LS T +T + LL +LQNLS+
Sbjct: 247 LQELNVSDCPTFTDESMRHISEGCPGVLYLNLSNTTITNRTMRLLPRHFHNLQNLSLAYC 306
Query: 172 GGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWTGVTKL 227
G TD L+ L + KL YLDL G +Q+S +G ++ + TG+T L
Sbjct: 307 RGF--TDKGLQYLNLGNGCHKLIYLDLSGCTQISVQG---------FRYIANSCTGITHL 355
Query: 228 -----PNISSLECLNLSFIQQVGAETDLVL---------SLTALQNLNHLERLNLE-QTQ 272
P ++ C+ + +++ T LV + AL L ++ E +
Sbjct: 356 TINDMPTLTD-NCVK-ALVEKCSRITSLVFTGAPHISDRTFKALSTCK-LRKIRFEGNKR 412
Query: 273 VSDATL-FPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSF 329
V+DA+ + + L H+ + + +TD SL LS L +LT L++ + V + + GL F
Sbjct: 413 VTDASFKYIDKNYPNLSHIYMADCKGITDSSLRSLSPLRQLTVLNLANCVRIGDMGLRQF 472
Query: 330 -KPPRSLKLLDLH 341
P S+++ +L+
Sbjct: 473 LDGPASIRIRELN 485
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 113/237 (47%), Gaps = 21/237 (8%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV 128
I G V DA + + L + +ADC+ +T S+L +L+ + L L+L+ CV++
Sbjct: 405 IRFEGNKRVTDASFKYIDKNYPNLSHIYMADCKGITDSSLRSLSPLRQLTVLNLANCVRI 464
Query: 129 TDAGMKHLLSIST---LEKLWLSETGLTAD--GIALLSSLQNLSVLDLGGLP-VTDLVLR 182
D G++ L + +L LS +D + L NL+ L L +T +
Sbjct: 465 GDMGLRQFLDGPASIRIRELNLSNCVRLSDVSVMKLSERCPNLNYLSLRNCDHLTAQGIG 524
Query: 183 SLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA-WTGVTKLPNISS-------LE 234
+ + L +DL G+ +SN G VL +L L+++ G+T + I + LE
Sbjct: 525 YIVNIFSLVSIDLSGTDISNEGLNVLSKHKKLKELSVSECYGITDV-GIQAFCKSSLILE 583
Query: 235 CLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHL 290
L++S+ Q+ +D+++ A+ +N L L++ +++D+ + LS +H+
Sbjct: 584 HLDVSYCSQL---SDMIIKALAIYCIN-LTSLSVAGCPKITDSAMEMLSAKCHYLHI 636
>gi|402553188|ref|YP_006594459.1| internalin [Bacillus cereus FRI-35]
gi|401794398|gb|AFQ08257.1| internalin [Bacillus cereus FRI-35]
Length = 760
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 131/280 (46%), Gaps = 26/280 (9%)
Query: 41 LADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRY---LRSLNV 97
+ D+ LR L+ +++ L E ++++ E + Y A +Y L+SL V
Sbjct: 191 ITDNKLRELVNKKVFNRKDLNTPITKEELLQVKDLFLNTNEILDY-SALKYMPNLKSLTV 249
Query: 98 ADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGI 157
A+ + S T + LK L L R + +D + ++ + L+ L LS +T +
Sbjct: 250 ANAKIKDPSFF---TSLKQLKHLAL-RGNEFSD--VTPIVKMDNLDSLDLSNNKIT--NV 301
Query: 158 ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 217
A L ++N+ L L G + D+ +L + +L+YL+L ++++N A L +++L
Sbjct: 302 APLIEMKNVKSLYLSGNQIEDVT--ALAKMEQLDYLNLANNKITN--VAPLSALKNVTYL 357
Query: 218 NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDAT 277
LA + + + SL +L + + V L+ ++ + LE L + + ++ D T
Sbjct: 358 TLAGNQIEDIKPLYSLPLKDLVLTR------NKVKDLSGIEQMKQLEELWIGKNEIKDVT 411
Query: 278 LFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 317
PLS +L L L N L D++ LSSL L L +
Sbjct: 412 --PLSKMTQLKQLHLPNNELKDIT--PLSSLVNLQKLDLE 447
>gi|67972342|dbj|BAE02513.1| unnamed protein product [Macaca fascicularis]
gi|355747899|gb|EHH52396.1| hypothetical protein EGM_12830 [Macaca fascicularis]
Length = 735
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 133/286 (46%), Gaps = 21/286 (7%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLK--ELDLSRCVKVTDAGMKHLL-SISTLEK 144
F L++L++A CR T L L G C K LDLS C +++ G +++ S + +
Sbjct: 295 FHNLQNLSLAYCRGFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGITH 354
Query: 145 LWLSETGLTADGI--ALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQ-V 200
L +++ D AL+ ++ L G P ++D ++L KL + G++ V
Sbjct: 355 LTINDMPTLTDNCVKALVEKCSRITSLVFTGAPHISDRTFKALST-CKLRKIRFEGNKRV 413
Query: 201 SNRGAAVL-KMFPRLSFLNLA-WTGVT-----KLPNISSLECLNLSFIQQVGAETDLVLS 253
++ + K +P LS + +A G+T L + L LNL+ ++G + L
Sbjct: 414 TDASFKYIDKNYPNLSHIYMADCKGITDSSLRSLSPLRQLTVLNLANCVRIG-DMGLRQF 472
Query: 254 LTALQNLNHLERLNLEQ-TQVSDATLFPLST-FKELIHLSLRNAS-LTDVSLHQLSSLSK 310
L ++ + LNL ++SD ++ LS L +LSLRN LT + + ++
Sbjct: 473 LDGPASI-RIRELNLSNCVRLSDVSVMKLSERCPNLNYLSLRNCDHLTAQGIGYIVNIFS 531
Query: 311 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 356
L ++ + ++N GL + LK L + + +T+ I FCK
Sbjct: 532 LVSIDLSGTDISNEGLNVLSKHKKLKELSVSECYGITDVGIQAFCK 577
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 120/253 (47%), Gaps = 42/253 (16%)
Query: 117 LKELDLSRCVKVTDAGMKHLL-SISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 171
L+EL++S C TD M+H+ + L LS T +T + LL +LQNLS+
Sbjct: 247 LQELNVSDCPTFTDESMRHISEGCPGVLYLNLSNTTITNRTMRLLPRHFHNLQNLSLAYC 306
Query: 172 GGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWTGVTKL 227
G TD L+ L + KL YLDL G +Q+S +G ++ + TG+T L
Sbjct: 307 RGF--TDKGLQYLNLGNGCHKLIYLDLSGCTQISVQG---------FRYIANSCTGITHL 355
Query: 228 -----PNISSLECLNLSFIQQVGAETDLVL---------SLTALQNLNHLERLNLE-QTQ 272
P ++ C+ + +++ T LV + AL L ++ E +
Sbjct: 356 TINDMPTLTD-NCVK-ALVEKCSRITSLVFTGAPHISDRTFKALSTCK-LRKIRFEGNKR 412
Query: 273 VSDATL-FPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSF 329
V+DA+ + + L H+ + + +TD SL LS L +LT L++ + V + + GL F
Sbjct: 413 VTDASFKYIDKNYPNLSHIYMADCKGITDSSLRSLSPLRQLTVLNLANCVRIGDMGLRQF 472
Query: 330 -KPPRSLKLLDLH 341
P S+++ +L+
Sbjct: 473 LDGPASIRIRELN 485
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 113/237 (47%), Gaps = 21/237 (8%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV 128
I G V DA + + L + +ADC+ +T S+L +L+ + L L+L+ CV++
Sbjct: 405 IRFEGNKRVTDASFKYIDKNYPNLSHIYMADCKGITDSSLRSLSPLRQLTVLNLANCVRI 464
Query: 129 TDAGMKHLLSIST---LEKLWLSETGLTAD--GIALLSSLQNLSVLDLGGLP-VTDLVLR 182
D G++ L + +L LS +D + L NL+ L L +T +
Sbjct: 465 GDMGLRQFLDGPASIRIRELNLSNCVRLSDVSVMKLSERCPNLNYLSLRNCDHLTAQGIG 524
Query: 183 SLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA-WTGVTKLPNISS-------LE 234
+ + L +DL G+ +SN G VL +L L+++ G+T + I + LE
Sbjct: 525 YIVNIFSLVSIDLSGTDISNEGLNVLSKHKKLKELSVSECYGITDV-GIQAFCKSSLILE 583
Query: 235 CLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHL 290
L++S+ Q+ +D+++ A+ +N L L++ +++D+ + LS +H+
Sbjct: 584 HLDVSYCSQL---SDMIIKALAIYCIN-LTSLSVAGCPKITDSAMEMLSAKCHYLHI 636
>gi|290993851|ref|XP_002679546.1| LRR_RI domain-containing protein [Naegleria gruberi]
gi|284093163|gb|EFC46802.1| LRR_RI domain-containing protein [Naegleria gruberi]
Length = 385
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 126/277 (45%), Gaps = 33/277 (11%)
Query: 101 RRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALL 160
R+ A++ + L EL++++ + G K + ++ L L ++ + G +
Sbjct: 97 NRIGIEGAKAISQLKQLTELEINQ---IGLEGTKIISELNQLTSLNIANNKMGKQGAKYI 153
Query: 161 SSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA 220
S ++ L+ LD+G + ++ ++ L KL L ++ + + RGA +L+ +L+ LN++
Sbjct: 154 SEMKQLTKLDIGTNQLGVEGVQYIRKLDKLTALSVFNNVIGFRGAMLLRKMTQLTELNIS 213
Query: 221 WTG--------VTKLPNISSLECLNLSF--IQQVGAE--------TDLVLSLTALQN--- 259
V+ LPN L LNLSF I VGA+ T+L ++ L N
Sbjct: 214 TNAIGDVGAKFVSDLPN---LAILNLSFNSISYVGAQFISKLPKLTELNMNQNDLGNEGV 270
Query: 260 -----LNHLERLNLEQTQVSD-ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 313
+ L L+L+ T++ + F K+L L L ++ D L +L KLT+
Sbjct: 271 KFISGIISLTNLSLQTTRIDEHGVKFISEKLKQLRILKLCENNIGDAGAKFLITLEKLTD 330
Query: 314 LSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 350
LS+ + G + ++L L +HG + E A
Sbjct: 331 LSLYSNNIGYEGAKAISTMKALTHLRIHGNPIGIEGA 367
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 127/295 (43%), Gaps = 29/295 (9%)
Query: 82 WMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLS--- 138
W + L + L++L++A + + ++ M L +LD++ C G L++
Sbjct: 26 WCSILMNMKKLKTLSIAYIG-MDEEDIKSICNMRQLTDLDVTGCSIGKGQGASTLVTFID 84
Query: 139 -ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLG--GLPVTDLVLRSLQVLTKLEYLDL 195
+ L +L +S + +G +S L+ L+ L++ GL T ++ L +L L++
Sbjct: 85 QLQQLTRLVISWNRIGIEGAKAISQLKQLTELEINQIGLEGTKIISE----LNQLTSLNI 140
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWT--GVTKLPNISSLECLN-LSFIQQVGAETDLVL 252
+++ +GA + +L+ L++ GV + I L+ L LS V +L
Sbjct: 141 ANNKMGKQGAKYISEMKQLTKLDIGTNQLGVEGVQYIRKLDKLTALSVFNNVIGFRGAML 200
Query: 253 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 312
L+ + L LN+ + D +S L L+L S++ V +S L KLT
Sbjct: 201 ----LRKMTQLTELNISTNAIGDVGAKFVSDLPNLAILNLSFNSISYVGAQFISKLPKLT 256
Query: 313 NLSIRDAVLTNSGLGSFKPPRSLKLL-------DLHGGWLLTED----AILQFCK 356
L++ L N G+ SL L D HG ++E IL+ C+
Sbjct: 257 ELNMNQNDLGNEGVKFISGIISLTNLSLQTTRIDEHGVKFISEKLKQLRILKLCE 311
>gi|125581626|gb|EAZ22557.1| hypothetical protein OsJ_06223 [Oryza sativa Japonica Group]
Length = 960
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 104/232 (44%), Gaps = 25/232 (10%)
Query: 82 WMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIST 141
W + LR L ++DC + + A +T L++LDLS V T + + T
Sbjct: 212 WAGVVSNLPSLRVLALSDCGLTAAPSPPARANLTRLQKLDLSTNVINTSSANSWFWDVPT 271
Query: 142 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVS 201
L L LS L+ L ++ NL VL+L G + ++ +LQ L L+ +DL + V+
Sbjct: 272 LTYLDLSGNALSGVFPDALGNMTNLRVLNLQGNDMVGMIPATLQRLCGLQVVDLTVNSVN 331
Query: 202 NRGAAVLKMFPR----------LSFLNLA-----WTGVTKLPNISSLECLNLSFIQQVGA 246
A ++ PR LS +N++ W G +S L L+LSF + G
Sbjct: 332 GDMAEFMRRLPRCVFGKLQVLQLSAVNMSGHLPKWIG-----EMSELTILDLSFNKLSG- 385
Query: 247 ETDLVLSLTALQNLNHLE-RLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 297
++ L + +L NL L NL +S+ L + E I LSL N S+
Sbjct: 386 --EIPLGIGSLSNLTRLFLHNNLLNGSLSEEHFADLVSL-EWIDLSLNNLSM 434
>gi|401428205|ref|XP_003878585.1| hypothetical protein, unknown function [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322494834|emb|CBZ30137.1| hypothetical protein, unknown function [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 422
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 112/234 (47%), Gaps = 23/234 (9%)
Query: 52 RRLIF------PSLLEVFK--HNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRR- 102
RRL+ S LE K H+ + + L G +DA + AF LR L + CR
Sbjct: 182 RRLVLDNTNVAASCLEHLKCTHSVQTLSLMGCRKIDA---LQVSAFPELRRLLL--CRTP 236
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
+ S ++ + L+ ++L C ++ D + ++ L +L+L ET +T GIA L+
Sbjct: 237 IASESMEGIEKCRHLQIVNLGGCQEIVDVNV--FGALKQLRELFLHETSVTNAGIAGLAD 294
Query: 163 LQNLSVLDLGG-LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW 221
+ L L+LGG + V++ + L L L L LW ++V+N G + + S + L
Sbjct: 295 CERLEKLNLGGCIHVSN--INHLGRLVNLLELHLWSTKVTNSG--IEGLASCCSLVELVL 350
Query: 222 TGVTKLPNISSLECL-NLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVS 274
++ ++ L CL ++ +I +G E D + L + LE L L T+++
Sbjct: 351 DDCVRITDVMPLGCLQSIRWISLIGTEVD-ARGVKGLIHCQKLETLALGGTRIA 403
>gi|224124626|ref|XP_002330070.1| predicted protein [Populus trichocarpa]
gi|222871495|gb|EEF08626.1| predicted protein [Populus trichocarpa]
Length = 1126
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 123/263 (46%), Gaps = 17/263 (6%)
Query: 88 AFRYLRSLNVADCRRVTSSALWALTG-MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLW 146
F L+SL+++D ++T S L L+ + L+ L LS + D+ + S+L+ L
Sbjct: 134 GFSALKSLDLSD-NQLTGSGLKVLSSRLQKLENLHLSG-NQCNDSIFSSITGFSSLKSLD 191
Query: 147 LSETGLTADGIALLSS-LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
LS LT G+ +LSS LQ L L L G D + S+ + L+ LDL ++V+ G
Sbjct: 192 LSYNELTGSGLKVLSSRLQKLENLHLSGNQCNDSIFSSITGFSSLKSLDLSYNEVTGSGL 251
Query: 206 AVLK-MFPRLSFLNLAWTGVTKLPNISSL-----ECLNLSFIQQVGAETDLVLSLTALQN 259
VL +L L+L+ S + LNLS Q G+ T + +
Sbjct: 252 KVLSSKLKKLENLDLSDNQCNDSIFSSLSGFSSLKYLNLSQNQLTGSSTGINSFQVLVSG 311
Query: 260 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLT-DVSLHQLSSLSK--LTNLSI 316
L +LE L+L ++++ L LS F L L L + T L+ L +L L N
Sbjct: 312 LRNLEELHLYSNKLNNNILSSLSGFSTLKSLDLSDNMFTGSTGLNGLRNLETLYLGNTDF 371
Query: 317 RDAVLTNSGLGSFKPPRSLKLLD 339
++++L S LG+ SLK LD
Sbjct: 372 KESILIES-LGALP---SLKTLD 390
>gi|85679295|gb|ABC72063.1| InlE [Listeria monocytogenes]
Length = 498
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 127/268 (47%), Gaps = 30/268 (11%)
Query: 115 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 174
T L++ D++ V TD + ++ +L G+T I + L NLS L+L
Sbjct: 56 TLLEKADVTDEVTQTD--------LDSITQLSAKSAGITT--IEGMQYLTNLSELELTDN 105
Query: 175 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLNLAWTGVTKLPNISSL 233
+TD+ L LTK+ L L G+ + + A A LK L + T VT L +++L
Sbjct: 106 QITDV--SPLANLTKITELGLSGNPLKDVSAIAGLKSLKMLHLIYTDITDVTSLAGLTNL 163
Query: 234 ECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 293
+ LNL Q + ++ L L +L+ L+L TQVSD T PL+ +L L+
Sbjct: 164 QELNLDINQ--------ITDISPLAALTNLQTLSLGYTQVSDLT--PLANLSKLTILNAE 213
Query: 294 NASLTDVSLHQLSSLSKLTNLSIRDAVLTN-SGLGSFKPPRSLKLLDLHGGWLLTEDAIL 352
N+ ++D+S L+SLS L + +R+ +++ S L + +L +++L + +
Sbjct: 214 NSKVSDIS--PLASLSSLAEVYLRENQISDVSPLANIP---NLSIIELTDQIITNQPVYY 268
Query: 353 QFCKMHPRIEVWHELSVICPSDQIGSNG 380
Q + P + +I P D I NG
Sbjct: 269 QNKIIVPNVIKGLSGELIAP-DTISDNG 295
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 101/206 (49%), Gaps = 27/206 (13%)
Query: 105 SSALWALTGM---TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLS 161
S+ + + GM T L EL+L TD + + ++ L K+ +E GL+ + + +S
Sbjct: 82 SAGITTIEGMQYLTNLSELEL------TDNQITDVSPLANLTKI--TELGLSGNPLKDVS 133
Query: 162 SLQNLSVLDLGGLPVTDLV-LRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA 220
++ L L + L TD+ + SL LT L+ L+L +Q+++ + L L L+L
Sbjct: 134 AIAGLKSLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITD--ISPLAALTNLQTLSLG 191
Query: 221 WTGV---TKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDAT 277
+T V T L N+S L LN AE V ++ L +L+ L + L + Q+SD +
Sbjct: 192 YTQVSDLTPLANLSKLTILN--------AENSKVSDISPLASLSSLAEVYLRENQISDVS 243
Query: 278 LFPLSTFKELIHLSLRNASLTDVSLH 303
PL+ L + L + +T+ ++
Sbjct: 244 --PLANIPNLSIIELTDQIITNQPVY 267
>gi|290892592|ref|ZP_06555585.1| InlE protein [Listeria monocytogenes FSL J2-071]
gi|404406718|ref|YP_006689433.1| internalin E [Listeria monocytogenes SLCC2376]
gi|290557901|gb|EFD91422.1| InlE protein [Listeria monocytogenes FSL J2-071]
gi|404240867|emb|CBY62267.1| internalin E (LPXTG motif) [Listeria monocytogenes SLCC2376]
Length = 499
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 127/268 (47%), Gaps = 30/268 (11%)
Query: 115 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 174
T L++ D++ V TD + ++ +L G+T I + L NLS L+L
Sbjct: 57 TLLEKADVTDEVTQTD--------LDSITQLSAKSAGITT--IEGMQYLTNLSELELTDN 106
Query: 175 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLNLAWTGVTKLPNISSL 233
+TD+ L LTK+ L L G+ + + A A LK L + T VT L +++L
Sbjct: 107 QITDV--SPLANLTKITELGLSGNPLKDVSAIAGLKSLKMLHLIYTDITDVTSLAGLTNL 164
Query: 234 ECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 293
+ LNL Q + ++ L L +L+ L+L TQVSD T PL+ +L L+
Sbjct: 165 QELNLDINQ--------ITDISPLAALTNLQTLSLGYTQVSDLT--PLANLSKLTILNAE 214
Query: 294 NASLTDVSLHQLSSLSKLTNLSIRDAVLTN-SGLGSFKPPRSLKLLDLHGGWLLTEDAIL 352
N+ ++D+S L+SLS L + +R+ +++ S L + +L +++L + +
Sbjct: 215 NSKVSDIS--PLASLSSLAEVYLRENQISDVSPLANIP---NLSIIELTDQIITNQPVYY 269
Query: 353 QFCKMHPRIEVWHELSVICPSDQIGSNG 380
Q + P + +I P D I NG
Sbjct: 270 QNKIIVPNVIKGLSGELIAP-DTISDNG 296
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 101/206 (49%), Gaps = 27/206 (13%)
Query: 105 SSALWALTGM---TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLS 161
S+ + + GM T L EL+L TD + + ++ L K+ +E GL+ + + +S
Sbjct: 83 SAGITTIEGMQYLTNLSELEL------TDNQITDVSPLANLTKI--TELGLSGNPLKDVS 134
Query: 162 SLQNLSVLDLGGLPVTDLV-LRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA 220
++ L L + L TD+ + SL LT L+ L+L +Q+++ + L L L+L
Sbjct: 135 AIAGLKSLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITD--ISPLAALTNLQTLSLG 192
Query: 221 WTGV---TKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDAT 277
+T V T L N+S L LN AE V ++ L +L+ L + L + Q+SD +
Sbjct: 193 YTQVSDLTPLANLSKLTILN--------AENSKVSDISPLASLSSLAEVYLRENQISDVS 244
Query: 278 LFPLSTFKELIHLSLRNASLTDVSLH 303
PL+ L + L + +T+ ++
Sbjct: 245 --PLANIPNLSIIELTDQIITNQPVY 268
>gi|52144007|ref|YP_082821.1| internalin [Bacillus cereus E33L]
gi|51977476|gb|AAU19026.1| internalin [Bacillus cereus E33L]
Length = 772
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 133/280 (47%), Gaps = 26/280 (9%)
Query: 41 LADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRY---LRSLNV 97
+ D+ LR L+ +++ L E ++++ E + Y A +Y L+SL V
Sbjct: 197 ITDNKLRELVNKKVFNRKDLNTPITKEELLQVKNLFLNTNEILDY-SALKYMPNLKSLTV 255
Query: 98 ADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGI 157
A+ + + + +A + L L L R + +D + L+ + L+ L LS +T +
Sbjct: 256 ANAK-IKDPSFFA--NLKQLNHLAL-RGNEFSD--VTPLVKMDHLDSLDLSNNKIT--NV 307
Query: 158 ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 217
A L ++N+ L L G + D+ + L + +L+YL+L ++++N A L +++L
Sbjct: 308 APLIEMKNVKSLYLSGNQIEDVTV--LAKMEQLDYLNLANNKITN--VAPLSALKNVTYL 363
Query: 218 NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDAT 277
LA + + + SL +L + + V L+ ++ + LE L + + ++ D T
Sbjct: 364 TLAGNQIEDIKPLYSLPLKDLVLTR------NKVKDLSGIEQMKQLEELWIGKNEIKDIT 417
Query: 278 LFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 317
PLS +L L L N LTD++ LSSL L L +
Sbjct: 418 --PLSKMTQLKELHLPNNELTDIT--PLSSLVNLQKLDLE 453
>gi|167887237|gb|ACA09278.1| InlE [Listeria monocytogenes]
gi|167887239|gb|ACA09279.1| InlE [Listeria monocytogenes]
gi|167887241|gb|ACA09280.1| InlE [Listeria monocytogenes]
gi|167887251|gb|ACA09285.1| InlE [Listeria monocytogenes]
gi|167887253|gb|ACA09286.1| InlE [Listeria monocytogenes]
gi|167887281|gb|ACA09300.1| InlE [Listeria monocytogenes]
gi|167887289|gb|ACA09304.1| InlE [Listeria monocytogenes]
gi|167887291|gb|ACA09305.1| InlE [Listeria monocytogenes]
gi|167887301|gb|ACA09310.1| InlE [Listeria monocytogenes]
gi|167887305|gb|ACA09312.1| InlE [Listeria monocytogenes]
gi|167887339|gb|ACA09329.1| InlE [Listeria monocytogenes]
gi|167887341|gb|ACA09330.1| InlE [Listeria monocytogenes]
gi|167887343|gb|ACA09331.1| InlE [Listeria monocytogenes]
gi|167887345|gb|ACA09332.1| InlE [Listeria monocytogenes]
gi|167887347|gb|ACA09333.1| InlE [Listeria monocytogenes]
Length = 186
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 90/189 (47%), Gaps = 35/189 (18%)
Query: 156 GIALLSSLQ---NLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMF 211
GI + LQ NLS L+L VTDL L LTK+ L L G+ + + A A LK
Sbjct: 4 GITTIEGLQYLTNLSELELIDNQVTDL--NPLTNLTKITELRLSGNPLKDVSALAGLKNL 61
Query: 212 PRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 271
+ + T VT L +S+L+ LNL Q + +T L L++L+ L+ T
Sbjct: 62 KTMDLIYTDITDVTPLAGLSNLQVLNLDINQ--------ITDITPLAGLSNLQFLSFGST 113
Query: 272 QVSDATLFPLSTFKELIHLSLRNASLTDVS-----------------LHQLSSLSKLTNL 314
QVSD T PL+ +L L+ N+ ++DVS + +S L+KL NL
Sbjct: 114 QVSDLT--PLANLSKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQISDVSPLAKLPNL 171
Query: 315 SIRDAVLTN 323
SI LTN
Sbjct: 172 SI--VTLTN 178
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 22/197 (11%)
Query: 106 SALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQN 165
+ + L +T L EL+L +VTD + L +++ + +L LS G ++ L+ L+N
Sbjct: 6 TTIEGLQYLTNLSELELIDN-QVTD--LNPLTNLTKITELRLS--GNPLKDVSALAGLKN 60
Query: 166 LSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV- 224
L +DL +TD+ L L+ L+ L+L +Q+++ L L FL+ T V
Sbjct: 61 LKTMDLIYTDITDVT--PLAGLSNLQVLNLDINQITD--ITPLAGLSNLQFLSFGSTQVS 116
Query: 225 --TKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 282
T L N+S L LN A V ++ L L++L + LE+ Q+SD + PL+
Sbjct: 117 DLTPLANLSKLTTLN--------AMNSKVSDVSPLTGLSNLTEVYLEENQISDVS--PLA 166
Query: 283 TFKELIHLSLRNASLTD 299
L ++L N ++T+
Sbjct: 167 KLPNLSIVTLTNQTITN 183
>gi|167887287|gb|ACA09303.1| InlE [Listeria monocytogenes]
Length = 186
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 90/189 (47%), Gaps = 35/189 (18%)
Query: 156 GIALLSSLQ---NLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMF 211
GI + LQ NLS L+L VTDL L LTK+ L L G+ + + A A LK
Sbjct: 4 GITTIEGLQYLTNLSELELIDNQVTDL--NPLTNLTKITELRLSGNPLKDVSALAGLKNL 61
Query: 212 PRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 271
+ + T VT L +S+L+ LNL Q + +T L L++L+ L+ T
Sbjct: 62 KTMDLIYTDITDVTPLAGLSNLQVLNLDINQ--------ITDITPLAGLSNLQFLSFGST 113
Query: 272 QVSDATLFPLSTFKELIHLSLRNASLTDVS-----------------LHQLSSLSKLTNL 314
QVSD T PL+ +L L+ N+ ++DVS + +S L+KL NL
Sbjct: 114 QVSDLT--PLANLSKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQISDVSPLAKLPNL 171
Query: 315 SIRDAVLTN 323
SI LTN
Sbjct: 172 SI--VTLTN 178
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 22/197 (11%)
Query: 106 SALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQN 165
+ + L +T L EL+L +VTD + L +++ + +L LS G ++ L+ L+N
Sbjct: 6 TTIEGLQYLTNLSELELIDN-QVTD--LNPLTNLTKITELRLS--GNPLKDVSALAGLKN 60
Query: 166 LSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV- 224
L +DL +TD+ L L+ L+ L+L +Q+++ L L FL+ T V
Sbjct: 61 LKTMDLIYTDITDVT--PLAGLSNLQVLNLDINQITD--ITPLAGLSNLQFLSFGSTQVS 116
Query: 225 --TKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 282
T L N+S L LN A V ++ L L++L + LE+ Q+SD + PL+
Sbjct: 117 DLTPLANLSKLTTLN--------AMNSKVSDVSPLTGLSNLTEVYLEENQISDVS--PLA 166
Query: 283 TFKELIHLSLRNASLTD 299
L ++L N + T+
Sbjct: 167 KLPNLSIVTLTNQTFTN 183
>gi|393905335|gb|EJD73939.1| hypothetical protein LOAG_18676 [Loa loa]
Length = 509
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 140/345 (40%), Gaps = 100/345 (28%)
Query: 91 YLRSLNVADCRRVTSSALWALTGMTC--LKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+L+ L++ C V +AL + T + C ++ L L +C +VTD+ ++L + +WL
Sbjct: 166 FLKRLSLRGCENVQENALRSFT-LKCPNIEHLSLYKCKRVTDSTCEYL-GRNCHRLVWLD 223
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK-LEYLDL-WGSQVSNRGA- 205
TA +TD LR++ K LEYL++ W V NRG
Sbjct: 224 LENCTA---------------------ITDKSLRAVSEGCKNLEYLNISWCENVQNRGVQ 262
Query: 206 AVLKMFPRLSFL------NLAWTGVTKLPNISS--------------------------L 233
AVL+ P+LS L L T ++ N L
Sbjct: 263 AVLQGCPKLSTLICRGCEGLTETAFAEMRNFCCQLRTVNLLGCFITDDTVANLAAGCPKL 322
Query: 234 ECLNLSFIQQVGAET------------DLVLSLTAL----------QNLNHLERLNLEQT 271
E L LS Q+ DL LS +L +N + LER++LE
Sbjct: 323 EYLCLSSCTQITDRALISLANGCHRLKDLELSGCSLLTDHGFGILAKNCHELERMDLEDC 382
Query: 272 QV-SDATLFPLST-FKELIHLSLRNASL-TDVSLHQLSSLSKLTNLSIRDAV-------- 320
+ +D TL S L++LSL + L TD L QL N ++D +
Sbjct: 383 SLLTDITLDNFSKGCPCLLNLSLSHCELITDAGLRQLC-----LNYHLKDRIQVLELDNC 437
Query: 321 --LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEV 363
+T+ L + R+L+ +DL+ +T+DAI +F P +EV
Sbjct: 438 PQITDISLDYMRQVRTLQRVDLYDCQNITKDAIKRFKNFKPDVEV 482
>gi|87307225|ref|ZP_01089370.1| hypothetical protein DSM3645_16920 [Blastopirellula marina DSM
3645]
gi|87289965|gb|EAQ81854.1| hypothetical protein DSM3645_16920 [Blastopirellula marina DSM
3645]
Length = 378
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 101 RRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALL 160
+ V AL L + + E++L +VTDAG++HL + LE+L L++T +T G+ L
Sbjct: 258 KPVHDEALAPLRKIGNVVEINL-MGTEVTDAGLEHLAGLKQLERLNLAKTKVTDSGLRYL 316
Query: 161 SSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
++ + LS L+L V+D + L L L +L LW ++ + A
Sbjct: 317 AACEKLSYLNLYATEVSDAGIDHLYSLPSLRHLYLWQTKATPESA 361
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%)
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
V D + L I + ++ L T +T G+ L+ L+ L L+L VTD LR L
Sbjct: 260 VHDEALAPLRKIGNVVEINLMGTEVTDAGLEHLAGLKQLERLNLAKTKVTDSGLRYLAAC 319
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 225
KL YL+L+ ++VS+ G L P L L L T T
Sbjct: 320 EKLSYLNLYATEVSDAGIDHLYSLPSLRHLYLWQTKAT 357
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 147 LSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAA 206
LS+ + + +A L + N+ ++L G VTD L L L +LE L+L ++V++ G
Sbjct: 255 LSDKPVHDEALAPLRKIGNVVEINLMGTEVTDAGLEHLAGLKQLERLNLAKTKVTDSGLR 314
Query: 207 VLKMFPRLSFLNLAWTGVT 225
L +LS+LNL T V+
Sbjct: 315 YLAACEKLSYLNLYATEVS 333
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N I L G DA + +L + L LN+A + VT S L L L L+L
Sbjct: 273 NVVEINLMGTEVTDA-GLEHLAGLKQLERLNLAKTK-VTDSGLRYLAACEKLSYLNL-YA 329
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 174
+V+DAG+ HL S+ +L L+L +T T + LS+ ++LG +
Sbjct: 330 TEVSDAGIDHLYSLPSLRHLYLWQTKATPESAKQLSAAIPGLKVNLGSM 378
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 44/74 (59%)
Query: 253 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 312
+L L+ + ++ +NL T+V+DA L L+ K+L L+L +TD L L++ KL+
Sbjct: 264 ALAPLRKIGNVVEINLMGTEVTDAGLEHLAGLKQLERLNLAKTKVTDSGLRYLAACEKLS 323
Query: 313 NLSIRDAVLTNSGL 326
L++ ++++G+
Sbjct: 324 YLNLYATEVSDAGI 337
>gi|408672788|ref|YP_006872536.1| Planctomycete cytochrome C [Emticicia oligotrophica DSM 17448]
gi|387854412|gb|AFK02509.1| Planctomycete cytochrome C [Emticicia oligotrophica DSM 17448]
Length = 482
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 52/85 (61%)
Query: 142 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVS 201
L +L LS + + + +++ +NL+ L+L ++D+ L L+ L KL+ L+L+G+ ++
Sbjct: 366 LVRLRLSNQPINDEAVKKIANFKNLTRLNLENTRISDVSLEYLKALPKLQQLNLYGTNIT 425
Query: 202 NRGAAVLKMFPRLSFLNLAWTGVTK 226
++G AVL +P L + L T V+K
Sbjct: 426 DKGLAVLTKYPNLKVIYLWQTKVSK 450
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Query: 254 LTALQNL-NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 312
L L+N+ N L RL L ++D + ++ FK L L+L N ++DVSL L +L KL
Sbjct: 356 LDNLENITNQLVRLRLSNQPINDEAVKKIANFKNLTRLNLENTRISDVSLEYLKALPKLQ 415
Query: 313 NLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL--LTEDAILQFCKMHPRIEV 363
L++ +T+ GL +LK++ L W +++ I Q K P +++
Sbjct: 416 QLNLYGTNITDKGLAVLTKYPNLKVIYL---WQTKVSKSGIEQLKKSLPSLQI 465
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 61/131 (46%), Gaps = 8/131 (6%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC-LKELDLSRCVKVTDAGMKHLLSIST 141
+A+LG S N + R S L L +T L L LS + D +K + +
Sbjct: 331 IAHLGDGSNYLSANFVNVRNYQPSLLDNLENITNQLVRLRLSNQ-PINDEAVKKIANFKN 389
Query: 142 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK---LEYLDLWGS 198
L +L L T ++ + L +L L L+L G +TD + L VLTK L+ + LW +
Sbjct: 390 LTRLNLENTRISDVSLEYLKALPKLQQLNLYGTNITD---KGLAVLTKYPNLKVIYLWQT 446
Query: 199 QVSNRGAAVLK 209
+VS G LK
Sbjct: 447 KVSKSGIEQLK 457
>gi|431892162|gb|ELK02609.1| F-box/LRR-repeat protein 14 [Pteropus alecto]
Length = 412
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 88/172 (51%), Gaps = 11/172 (6%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
LR LN++ C ++ + L L+ M L+ L+L C ++D G+ HL + L LS
Sbjct: 230 LRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHL----AMGSLRLSGLD 285
Query: 152 LTADGIA-LLSSLQNLSVLDLG-GLPVTDLVLRSL-QVLTKLEYLDLWG-SQVSNRGAAV 207
++ DGI ++ + L L++G + +TD L + + L++L +DL+G ++++ RG
Sbjct: 286 VSDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRITKRGLER 345
Query: 208 LKMFPRLSFLNLAWTGVTKLPNISS---LECLNLSFIQQVGAETDLVLSLTA 256
+ P L LNL +T +SS L L LS + + +V+ L A
Sbjct: 346 ITQLPCLKVLNLGLWQMTDSEKVSSERLLILLKLSDVDSLAFHAGIVILLEA 397
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 106/235 (45%), Gaps = 48/235 (20%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL--SISTLEKLWL 147
R +R + + RR S + + GM ++ L+LS C +TD G+ H IS+L L L
Sbjct: 68 RGIRRVQILSLRRSLS---YVIQGMANIESLNLSGCYNLTDNGLGHAFVQEISSLRALNL 124
Query: 148 SETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG-SQVSNRGAA 206
S D SSL ++ Q L LE L+L G S ++N G
Sbjct: 125 SLCKQITD-----SSLGRIA-----------------QYLKGLEVLELGGCSNITNTG-- 160
Query: 207 VLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERL 266
L +AW G+ +L +++ C +LS VG ++ +A + LE+L
Sbjct: 161 ---------LLLIAW-GLQRLKSLNLRSCRHLS---DVGIGHLAGMTRSAAEGCLGLEQL 207
Query: 267 NLEQTQ-VSDATLFPLS---TFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 317
L+ Q ++D +L +S T L++LS ++D L LS + L +L++R
Sbjct: 208 TLQDCQKLTDLSLKHISRGLTGLRLLNLSF-CGGISDAGLLHLSHMGSLRSLNLR 261
>gi|156397394|ref|XP_001637876.1| predicted protein [Nematostella vectensis]
gi|156224992|gb|EDO45813.1| predicted protein [Nematostella vectensis]
Length = 449
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 69/130 (53%), Gaps = 9/130 (6%)
Query: 83 MAYLGA-FRYLRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHL-LSI 139
+ +LGA LR+L VA C + T + AL G L+ +DL CV +TD+ + HL L
Sbjct: 278 LQHLGAGCPELRTLEVAQCSQFTDAGFQALCRGCHNLQRMDLEECVLITDSTLNHLSLWC 337
Query: 140 STLEKLWLSETGL-TADGIALL----SSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYL 193
S L+KL LS L T DGI L + ++L L+L P +TD L L +L+ +
Sbjct: 338 SGLQKLSLSHCELITDDGIHQLGASPCATEHLEFLELDNCPLITDNALDYLVQCHQLKRI 397
Query: 194 DLWGSQVSNR 203
+L+ Q+ R
Sbjct: 398 ELYDCQLITR 407
>gi|405971309|gb|EKC36154.1| UBX domain-containing protein 1 [Crassostrea gigas]
Length = 852
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 100/196 (51%), Gaps = 20/196 (10%)
Query: 86 LGAFRY---LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
L A RY +++L++ C +T + L LT + LK L+LS C ++TD ++ + + L
Sbjct: 469 LHAVRYHCQIQTLSLNSCSLITDAGLLELTSLKKLKHLNLSGCRQLTDKCLEIVKEMPGL 528
Query: 143 EKLWLSETGLTADGI--ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 200
L L TG+T G +LS +L VL+L + +T+ +L L+ L L+ L L +++
Sbjct: 529 VSLNLDGTGVTESGFIGIILSLPASLQVLNLNRMNITEKLLTHLKDLENLKVLCLEHTKI 588
Query: 201 SNRGAAVLKMFPRLSFLNLAWTGVTK---LPNISSLECLNLSFIQQVGAETDLVLSLTAL 257
G + ++ L L+++ T + L +L CL ++ ++V + L+L +
Sbjct: 589 C--GLSGVEQLKSLETLDVSQTDIVSESLLCLGDNLTCLGIANTERVNGD----LALQYI 642
Query: 258 QN------LNHLERLN 267
QN + + ER+N
Sbjct: 643 QNNLTCLGIANTERVN 658
>gi|302805689|ref|XP_002984595.1| hypothetical protein SELMODRAFT_120629 [Selaginella moellendorffii]
gi|300147577|gb|EFJ14240.1| hypothetical protein SELMODRAFT_120629 [Selaginella moellendorffii]
Length = 734
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 109/231 (47%), Gaps = 17/231 (7%)
Query: 114 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLG- 172
+T L++L L R + L S+ L L L + T + LS L+NL LDL
Sbjct: 161 LTSLRKLILERADASAGSIPSFLASLENLTILNLQGSWFTGSIPSSLSKLKNLQTLDLSD 220
Query: 173 GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KL 227
GL +T + L L LEYLDL G++ S L P+L FL+++ T V+ ++
Sbjct: 221 GLRLTGSIPAFLGGLQNLEYLDLSGTKFSGSIPPSLGNLPKLRFLDISNTLVSSSIPVEI 280
Query: 228 PNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 287
++SLE L +S + G D L NL L+ L L Q + S+F +L
Sbjct: 281 GKLTSLETLRISGTKAAGRIPD------TLGNLKKLKVLELSQNAGMRGPI--PSSFGQL 332
Query: 288 IHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 338
L + S T ++ SSL +L+ L ++ V +NS GS P SL LL
Sbjct: 333 SSLEELSVSSTGLTGQIPSSLGQLSRL-VKLDVTSNSLSGSI--PESLGLL 380
>gi|307107597|gb|EFN55839.1| hypothetical protein CHLNCDRAFT_145384 [Chlorella variabilis]
Length = 582
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 117/248 (47%), Gaps = 29/248 (11%)
Query: 92 LRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVK-VTDAGMKHLLSIS---TLEKLW 146
LR+L ++ C ++T L A+ GMT L+ L L + V D G+ L +S T +
Sbjct: 232 LRTLLMSACCQLTDGCLAAVAEGMTLLRCLGLFEAGEGVADEGLASLARLSGSLTALDMG 291
Query: 147 LSETGLTADGIA-LLSSLQNLSVLDLGGLP-VTDLVLRSL-QVLTKLEYLDLWGSQ-VSN 202
S TADG+A + L NL +L++GG TD V+ ++ Q +L LD+ SQ ++
Sbjct: 292 YSCWSHTADGLAAIFPKLSNLQMLNIGGCEGTTDAVVGAVAQHCRQLTMLDISESQRMTA 351
Query: 203 RGAAVLKMFPRLSFLNLAWT------GVTKLPNISSLECLNLSFIQQVGAETDLVLSLTA 256
G L P L LNL W + LP S+ L+LSF ++ TD A
Sbjct: 352 AGVRQLAQLPCLLELNLGWNIRLRDESLEALP--PSITKLDLSFCGEL---TD-----RA 401
Query: 257 LQNLNHLERLN----LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 312
L + L RL + ++SD L L L HL L +S+T L L L +L+
Sbjct: 402 LAHAARLPRLASCIVRKCNRLSDEGLRALGRCASLEHLDLSYSSVTAAGLAHLRPLRRLS 461
Query: 313 NLSIRDAV 320
+L + D +
Sbjct: 462 SLVLVDCL 469
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 119/266 (44%), Gaps = 33/266 (12%)
Query: 55 IFPSLLEVFKHNAEAIELRG-ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTG 113
IFP L N + + + G E + DA A R L L++++ +R+T++ + L
Sbjct: 305 IFPKL-----SNLQMLNIGGCEGTTDAVVGAVAQHCRQLTMLDISESQRMTAAGVRQLAQ 359
Query: 114 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNL-SVLDL 171
+ CL EL+L +++ D ++ L ++ KL LS G LT +A + L L S +
Sbjct: 360 LPCLLELNLGWNIRLRDESLEAL--PPSITKLDLSFCGELTDRALAHAARLPRLASCIVR 417
Query: 172 GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNIS 231
++D LR+L LE+LDL S V+ G A L+ RLS L L
Sbjct: 418 KCNRLSDEGLRALGRCASLEHLDLSYSSVTAAGLAHLRPLRRLSSLVL------------ 465
Query: 232 SLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 291
++CL ++ LT L L L+ N ++ D L LS +L LS
Sbjct: 466 -VDCLR-------AVHPPCMMLLTELPALRALDASN--NKRLDDGCLQALSHASQLTALS 515
Query: 292 LRNAS-LTDVSLHQLSSLSKLTNLSI 316
L + +T+ L L L +LS+
Sbjct: 516 LNSCGKVTERGLMALVRCPSLRHLSV 541
>gi|149923411|ref|ZP_01911816.1| Rab family protein [Plesiocystis pacifica SIR-1]
gi|149815718|gb|EDM75244.1| Rab family protein [Plesiocystis pacifica SIR-1]
Length = 444
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 105/229 (45%), Gaps = 23/229 (10%)
Query: 99 DCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIA 158
D R A+ LTG++ L LDLS + + L +I TLE L+LS+T LT
Sbjct: 186 DVRNNPIPAVEGLTGLSALTGLDLS---GTQLSSLDGLPTIPTLESLYLSDTPLTD---- 238
Query: 159 LLSSLQNLSVLDLGGLPVTDLVLRSL---QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLS 215
LSSL L L D L SL +L L + G+++++ A + P L
Sbjct: 239 -LSSLPEEPA--LMNLVAMDCALSSLALPHAYPELSILRVGGNELTSIAALDPALTPGLE 295
Query: 216 FLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
L++ G+T++ ++SL L + V A + + L+ L L LE ++L VSD
Sbjct: 296 HLHVDENGLTEIAVLASLPALRV-----VNANLNAITDLSPLAELQELEEVSLIANGVSD 350
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS 324
L+ ++ L LR+ ++ DV+ +T L +R L++
Sbjct: 351 -----LTGLADVARLHLRDNAIVDVAPLHGDEPEVITYLDLRQNPLSDG 394
>gi|186511602|ref|NP_849538.2| Leucine-rich repeat-containing protein [Arabidopsis thaliana]
gi|281185491|sp|Q8VZG8.3|Y4885_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein
kinase At4g08850; Flags: Precursor
gi|18086327|gb|AAL57627.1| AT4g08850/T32A17_160 [Arabidopsis thaliana]
gi|224589610|gb|ACN59338.1| leucine-rich repeat receptor-like protein kinase [Arabidopsis
thaliana]
gi|332657282|gb|AEE82682.1| Leucine-rich repeat-containing protein [Arabidopsis thaliana]
Length = 1045
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 90/172 (52%), Gaps = 20/172 (11%)
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
+T A + +++ L +L LS +T + +S++ +S L L G ++ + +++L
Sbjct: 490 ITGAIPPEIWNMTQLSQLDLSSNRITGELPESISNINRISKLQLNGNRLSGKIPSGIRLL 549
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT--------GVTKLPNISSLECLNLS 239
T LEYLDL ++ S+ L PRL ++NL+ G+TKL S L+ L+LS
Sbjct: 550 TNLEYLDLSSNRFSSEIPPTLNNLPRLYYMNLSRNDLDQTIPEGLTKL---SQLQMLDLS 606
Query: 240 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 291
+ Q G ++ +LQN LERL+L +S + P +FK+++ L+
Sbjct: 607 YNQLDG---EISSQFRSLQN---LERLDLSHNNLS-GQIPP--SFKDMLALT 649
>gi|17546075|ref|NP_519477.1| GALA protein 4 [Ralstonia solanacearum GMI1000]
gi|17428371|emb|CAD15058.1| type III effector protein gala6 [Ralstonia solanacearum GMI1000]
Length = 620
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 106/246 (43%), Gaps = 18/246 (7%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALT--GMTCLKELDLSRCVKVTDA 131
G N + A+ L L+SLN++ W + G L++LDL C +D
Sbjct: 364 GGNEIGADGAEALARNVVLQSLNLS----YNPIGFWGVNALGRAKLRKLDLCACAIDSD- 418
Query: 132 GMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLE 191
G L ++L L+L + DG L+ L++L+L G + + ++L L
Sbjct: 419 GASALARNTSLASLYLGSNRIGDDGARALAKNSTLTLLNLSGNNIHAVGAQALASNDSLI 478
Query: 192 YLDLWGSQVSNRGAAVLKMFPRLSFLNL-----AWTGVTKLPNISSLECLNLSFIQQVGA 246
LDL + + + G A L PRL+ LNL TG +L ++L L+LS ++G
Sbjct: 479 TLDLSRNGIGDDGTAALACHPRLTSLNLSRNQIGSTGAQQLAKSATLAELDLSE-NRIGP 537
Query: 247 ETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLS 306
E L+ + + L LN+ + +A L+ L L R + + L
Sbjct: 538 EGAEALARSTV-----LTTLNVSYNAIGEAGARALAESVSLTSLDARRNGIGEDGAKVLE 592
Query: 307 SLSKLT 312
+ +++T
Sbjct: 593 ANTRIT 598
>gi|449435625|ref|XP_004135595.1| PREDICTED: F-box/LRR-repeat protein 3-like [Cucumis sativus]
Length = 640
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 122/268 (45%), Gaps = 31/268 (11%)
Query: 117 LKELDLSRCVKVTDAGMKHLL-SISTLEKLWLSETGLTAD-GIALLSS-LQNLSVLDLGG 173
LKE+ L +C+ VTD G+ ++ LE+L L +D G+ LL NL LDL
Sbjct: 146 LKEVRLDKCLGVTDVGLARIVVGCGRLERLSLKWCLQVSDLGLELLCKKCFNLRFLDLSY 205
Query: 174 LPVTDLVLRSLQVLTKLEYL--------DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 225
L VT+ LRS+ L KLE L D G Q G LK ++ G+T
Sbjct: 206 LKVTNESLRSISSLPKLETLVMAGCLSVDDAGLQFLEHGCPFLKKLDISRCDGISSYGLT 265
Query: 226 K-LPNISSLECLNLSF-IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLST 283
L LE L+ S+ I ++ + S+ +L+NL L+ + L+ TQ+S +S
Sbjct: 266 SILRGHDGLEQLDASYCISELSTD-----SIYSLKNLKCLKAIRLDGTQLSSTFFNVISV 320
Query: 284 FKE-LIHLSLRNA-SLTDVSLHQLSSLS---KLTNL----SIRDAVLTNSGLGSFKPPRS 334
E L+ L L +TD ++ QL S K+ NL SI DA ++ + K
Sbjct: 321 HCEYLVELGLSKCLGVTDANIIQLISRCISLKVLNLTCCHSITDAAISKTATSCLK---- 376
Query: 335 LKLLDLHGGWLLTEDAILQFCKMHPRIE 362
L L L ++TE ++ Q P +E
Sbjct: 377 LMSLKLESCNMITERSLDQLALNCPSLE 404
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 5/111 (4%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC--LKELDLSRC 125
E ++L V+ + + L L SL + C +T L + G+ C + ELDL RC
Sbjct: 404 EELDLTDCCGVNDKGLECLSRCSQLLSLKLGLCTNITDKGLIKI-GLNCKRIHELDLYRC 462
Query: 126 VKVTDAGMKHLLS-ISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLGGL 174
+ + DAG++ L S L KL LS LT G+ + L+ L VL++ GL
Sbjct: 463 LGIGDAGLEALSSGCKKLMKLNLSYCNKLTDRGMGYIGHLEELCVLEIRGL 513
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 24/149 (16%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMK 134
N + M Y+G L L + VTS L A+ G L +LD+ +C V DAG
Sbjct: 489 NKLTDRGMGYIGHLEELCVLEIRGLHNVTSVGLTAVAAGCKRLVDLDMKQCQNVDDAGFW 548
Query: 135 HLLSIS-TLEKLWLSETGLTADGIAL----LSSLQNLSVLDLGGLPVT--DLVLRSLQVL 187
L S + L +L +S ++ G+ + L+ LQ++ +++L + V DL LR+ +
Sbjct: 549 ALASYAHNLRQLNVSSCAVSDVGLCMMMGNLTCLQDVKLVNLNKVSVRGFDLALRTCCLR 608
Query: 188 TK----------------LEYLDLWGSQV 200
K LE L+ WG ++
Sbjct: 609 IKKVKLHASLRFMLSSETLEILNAWGCKI 637
>gi|290980851|ref|XP_002673145.1| predicted protein [Naegleria gruberi]
gi|284086726|gb|EFC40401.1| predicted protein [Naegleria gruberi]
Length = 468
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 100/225 (44%), Gaps = 13/225 (5%)
Query: 133 MKHLLSISTLEKL--WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKL 190
MKH+ S+ + + +E G+ +G +S ++ L+ L + + + L+ L L
Sbjct: 103 MKHVTSLEIDDNIEGTTNENGIGVEGAKHVSEMKQLTNLYVNANNIGTEGAKFLRELKNL 162
Query: 191 EYLDLWGSQVSNRGAAVLKMFPRL-----SFLNLAWTGVTKLPNISSLECLNLSFIQQVG 245
YL++ + + GA + +L S+ N+ G + ++ L L++ +G
Sbjct: 163 TYLNISENDIGVEGAKYISELKQLTDLDISYNNIGTEGAKYISDLKQLTTLDIE-SNNIG 221
Query: 246 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 305
E +S LN L+ LN+ + + D +S K+L HL + ++ + +
Sbjct: 222 TEGAKYIS-----ELNQLQVLNISYSSLGDKGAQYISEMKQLTHLYISDSLIRSEGAKYI 276
Query: 306 SSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 350
S + +LTNL I + + + G + L L + G L++++
Sbjct: 277 SEMKQLTNLFIENNDIDDEGAKHISTMKELTKLYMQGNRLISDEG 321
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 95/218 (43%), Gaps = 24/218 (11%)
Query: 132 GMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLE 191
G KH+ + L L+++ + +G L L+NL+ L++ + + + L +L
Sbjct: 128 GAKHVSEMKQLTNLYVNANNIGTEGAKFLRELKNLTYLNISENDIGVEGAKYISELKQLT 187
Query: 192 YLDLWGSQVSNRGAAVLKMFPRLSFL-----NLAWTGVTKLPNISSLECLNLS------- 239
LD+ + + GA + +L+ L N+ G + ++ L+ LN+S
Sbjct: 188 DLDISYNNIGTEGAKYISDLKQLTTLDIESNNIGTEGAKYISELNQLQVLNISYSSLGDK 247
Query: 240 ---FIQQVGAETDLVLSLTALQN--------LNHLERLNLEQTQVSDATLFPLSTFKELI 288
+I ++ T L +S + +++ + L L +E + D +ST KEL
Sbjct: 248 GAQYISEMKQLTHLYISDSLIRSEGAKYISEMKQLTNLFIENNDIDDEGAKHISTMKELT 307
Query: 289 HLSLR-NASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 325
L ++ N ++D LS L LT L I D + N G
Sbjct: 308 KLYMQGNRLISDEGAKYLSELKNLTVLFIGDNRIGNEG 345
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 120/276 (43%), Gaps = 28/276 (10%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N++ E Y+ + L +L++ T A + ++ + L+ L++S + D G ++
Sbjct: 194 NNIGTEGAKYISDLKQLTTLDIESNNIGTEGAKY-ISELNQLQVLNISYS-SLGDKGAQY 251
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ + L L++S++ + ++G +S ++ L+ L + + D + + + +L L +
Sbjct: 252 ISEMKQLTHLYISDSLIRSEGAKYISEMKQLTNLFIENNDIDDEGAKHISTMKELTKLYM 311
Query: 196 WGSQ-VSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSL 254
G++ +S+ GA L L+ L + G ++ N GA+ L
Sbjct: 312 QGNRLISDEGAKYLSELKNLTVL---FIGDNRIGN--------------EGAK-----HL 349
Query: 255 TALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 314
+ L+NL + + T++ D LS +L L + + +S+L +LT L
Sbjct: 350 SELKNLT---SIYVSYTEIGDEGAKYLSELNKLTILQIGYNGIGAEGAKHISNLKELTML 406
Query: 315 SIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 350
I+ + N G + L LD+ + TE A
Sbjct: 407 KIQYNNIGNEGAKYISELKQLTDLDISYNNIGTEGA 442
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 83/192 (43%), Gaps = 9/192 (4%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
+ +E Y+ + L +L + + + ++ M L +L + ++D G K+L
Sbjct: 268 IRSEGAKYISEMKQLTNLFIEN-NDIDDEGAKHISTMKELTKLYMQGNRLISDEGAKYLS 326
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
+ L L++ + + +G LS L+NL+ + + + D + L L KL L +
Sbjct: 327 ELKNLTVLFIGDNRIGNEGAKHLSELKNLTSIYVSYTEIGDEGAKYLSELNKLTILQIGY 386
Query: 198 SQVSNRGAAVLKMFPRLSFL-----NLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVL 252
+ + GA + L+ L N+ G + + L L++S+ +G E L
Sbjct: 387 NGIGAEGAKHISNLKELTMLKIQYNNIGNEGAKYISELKQLTDLDISY-NNIGTEGADYL 445
Query: 253 SLTALQNLNHLE 264
S ++ L HLE
Sbjct: 446 S--QMKQLTHLE 455
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 69/148 (46%), Gaps = 2/148 (1%)
Query: 72 LRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDA 131
++G + E YL + L L + D R+ + L+ + L + +S ++ D
Sbjct: 311 MQGNRLISDEGAKYLSELKNLTVLFIGD-NRIGNEGAKHLSELKNLTSIYVSYT-EIGDE 368
Query: 132 GMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLE 191
G K+L ++ L L + G+ A+G +S+L+ L++L + + + + + L +L
Sbjct: 369 GAKYLSELNKLTILQIGYNGIGAEGAKHISNLKELTMLKIQYNNIGNEGAKYISELKQLT 428
Query: 192 YLDLWGSQVSNRGAAVLKMFPRLSFLNL 219
LD+ + + GA L +L+ L +
Sbjct: 429 DLDISYNNIGTEGADYLSQMKQLTHLEI 456
>gi|290981600|ref|XP_002673518.1| predicted protein [Naegleria gruberi]
gi|284087102|gb|EFC40774.1| predicted protein [Naegleria gruberi]
Length = 399
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 99/220 (45%), Gaps = 21/220 (9%)
Query: 129 TDAGMKHLLSISTLE--KLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 186
D G K + IS L L L + + G+ +S + LS L L G LR L
Sbjct: 154 VDLGGKCMEYISKLPLITLELEASNIDEIGLGNISQITTLSKLKLFGNNFGSESLRHLVK 213
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV--------TKLPNISSLECLNL 238
L+ L+YL L +++ + G L + L +L+L++ + +KL N+S LE +
Sbjct: 214 LSNLKYLSLAYNKIDDEGVEYLSLLQSLEYLSLSYNNIGNDGVQFISKLENLSQLELIR- 272
Query: 239 SFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLT 298
+ I + G + + + +L +LNL + + + LS K+L L L +
Sbjct: 273 NRIDERGVQ--------FISKMKNLTKLNLGENPIRNIGALYLSKMKQLKGLDLDGTKID 324
Query: 299 DVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 338
D S+ L + L L+I L+ + + + K SLKL+
Sbjct: 325 DFSIEHLCLMKNLQYLNIERTNLSETKVETLK--ESLKLV 362
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 82/169 (48%), Gaps = 21/169 (12%)
Query: 105 SSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQ 164
S +L L ++ LK L L+ K+ D G+++L + +LE L LS + DG+ +S L+
Sbjct: 205 SESLRHLVKLSNLKYLSLAYN-KIDDEGVEYLSLLQSLEYLSLSYNNIGNDGVQFISKLE 263
Query: 165 NLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV 224
NLS L+L + + ++ + + L L+L + + N GA L +L L+L T +
Sbjct: 264 NLSQLELIRNRIDERGVQFISKMKNLTKLNLGENPIRNIGALYLSKMKQLKGLDLDGTKI 323
Query: 225 TKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQV 273
S+E L L + LQ LN +ER NL +T+V
Sbjct: 324 DDF----SIEHLCL---------------MKNLQYLN-IERTNLSETKV 352
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 77/151 (50%), Gaps = 2/151 (1%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N+ +E + +L L+ L++A ++ + L+ + L+ L LS + + G++
Sbjct: 201 NNFGSESLRHLVKLSNLKYLSLA-YNKIDDEGVEYLSLLQSLEYLSLSYN-NIGNDGVQF 258
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ + L +L L + G+ +S ++NL+ L+LG P+ ++ L + +L+ LDL
Sbjct: 259 ISKLENLSQLELIRNRIDERGVQFISKMKNLTKLNLGENPIRNIGALYLSKMKQLKGLDL 318
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK 226
G+++ + L + L +LN+ T +++
Sbjct: 319 DGTKIDDFSIEHLCLMKNLQYLNIERTNLSE 349
>gi|302825768|ref|XP_002994469.1| hypothetical protein SELMODRAFT_432389 [Selaginella moellendorffii]
gi|300137578|gb|EFJ04467.1| hypothetical protein SELMODRAFT_432389 [Selaginella moellendorffii]
Length = 714
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 110/231 (47%), Gaps = 17/231 (7%)
Query: 114 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLG- 172
+T L++L L R + L ++ L L L + T + LS L+NL LDL
Sbjct: 166 LTSLRKLILERADASAGSIPSFLANLENLTILNLQGSWFTGSIPSSLSKLKNLQTLDLSD 225
Query: 173 GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KL 227
GL +T + L L LEYLDL G++ S L P+L FL+++ T V+ ++
Sbjct: 226 GLRLTGSIPAFLGGLQNLEYLDLSGTKFSGSIPPSLGNLPKLRFLDISNTLVSSSIPVEI 285
Query: 228 PNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 287
++SLE L +S + G D L NL L+ L L Q + S+F +L
Sbjct: 286 GKLTSLETLRISGTKAAGRIPD------TLGNLKKLKVLELSQNAGMRGPI--PSSFGQL 337
Query: 288 IHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 338
L + S T ++ SSL +L+ L ++ V++NS GS P SL LL
Sbjct: 338 SSLEELSVSSTGLTGQIPSSLGQLSRL-VKLDVMSNSLSGSI--PESLGLL 385
>gi|290977067|ref|XP_002671260.1| predicted protein [Naegleria gruberi]
gi|284084827|gb|EFC38516.1| predicted protein [Naegleria gruberi]
Length = 378
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 112/242 (46%), Gaps = 14/242 (5%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N++ E M + ++L L+V + S+ + ++ M L L +S + G++
Sbjct: 141 NNIGDEGMKVISGMKHLTKLSVHNNHINVGSSQF-ISQMKQLTNLSISEN-HIGIEGVET 198
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ +S L +L +S + A G L+S L L+ L +G + D L+SL L L L
Sbjct: 199 ISQLSQLTRLKISSNQIGARGAILISKLDKLTKLSIGSNRINDEGLKSLCRLKHLTKLKA 258
Query: 196 WGSQVSNRGAAVLKMFPRLSFL-----NLAWTGVTKLPNISSLECLNLSFIQQVGAETDL 250
+Q+ N G + +L+FL N++ G + + L L +S Q+G +
Sbjct: 259 DFNQIGNEGVKSIIQLKQLTFLDIGGNNISHKGAQFINQLKQLRTLYISE-NQIGNKGAK 317
Query: 251 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR-NASLTDVSLHQLSSLS 309
++S L L L++ + ++SD + + K+L L LR N +T +QLS+L
Sbjct: 318 LIS-----ELTQLRILHIRKNELSDEGVKSILLMKQLTELDLRENYDITVRMENQLSTLK 372
Query: 310 KL 311
L
Sbjct: 373 SL 374
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 62/302 (20%), Positives = 130/302 (43%), Gaps = 31/302 (10%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
+ ++ L A+ + LK+++ R ++ G++ + + L L +S G+ +G +S
Sbjct: 23 IVTNGLKAIAELKQLKKINFHRN-QIGQNGLQTISQFNQLLCLDISCNGIGIEGAKAVSE 81
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT 222
L L LD+ + D+ + + + +L L + + ++++GA+ + +L+ LN+++
Sbjct: 82 LNQLKELDITANDIGDIGAKYISQMKELTKLYVRYNDINSQGASSIGELHQLTKLNISYN 141
Query: 223 GV--------TKLPNISSLECLN-------LSFIQQVGAETDLVLS--------LTALQN 259
+ + + +++ L N FI Q+ T+L +S + +
Sbjct: 142 NIGDEGMKVISGMKHLTKLSVHNNHINVGSSQFISQMKQLTNLSISENHIGIEGVETISQ 201
Query: 260 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 319
L+ L RL + Q+ +S +L LS+ + + D L L L LT L
Sbjct: 202 LSQLTRLKISSNQIGARGAILISKLDKLTKLSIGSNRINDEGLKSLCRLKHLTKLKADFN 261
Query: 320 VLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSN 379
+ N G+ S + L LD+ G + + A QF ++ + +QIG+
Sbjct: 262 QIGNEGVKSIIQLKQLTFLDIGGNNISHKGA--QFINQLKQLRTLY-----ISENQIGNK 314
Query: 380 GP 381
G
Sbjct: 315 GA 316
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 52/274 (18%), Positives = 117/274 (42%), Gaps = 27/274 (9%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + + + F L L+++ C + A++ + LKELD++ + D G K+
Sbjct: 45 NQIGQNGLQTISQFNQLLCLDIS-CNGIGIEGAKAVSELNQLKELDIT-ANDIGDIGAKY 102
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ + L KL++ + + G + + L L+ L++ + D ++ + + L L +
Sbjct: 103 ISQMKELTKLYVRYNDINSQGASSIGELHQLTKLNISYNNIGDEGMKVISGMKHLTKLSV 162
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSFIQQVGAETDL 250
+ ++ + + +L+ L+++ GV + +S L L +S Q+GA +
Sbjct: 163 HNNHINVGSSQFISQMKQLTNLSISENHIGIEGVETISQLSQLTRLKISS-NQIGARGAI 221
Query: 251 VLS-------------------LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 291
++S L +L L HL +L + Q+ + + + K+L L
Sbjct: 222 LISKLDKLTKLSIGSNRINDEGLKSLCRLKHLTKLKADFNQIGNEGVKSIIQLKQLTFLD 281
Query: 292 LRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 325
+ +++ ++ L +L L I + + N G
Sbjct: 282 IGGNNISHKGAQFINQLKQLRTLYISENQIGNKG 315
Score = 41.6 bits (96), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 99/245 (40%), Gaps = 26/245 (10%)
Query: 108 LWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLS 167
L +L T EL + VT+ G+K + + L+K+ + +G+ +S L
Sbjct: 4 LQSLDFSTTTNELSYNHNYIVTN-GLKAIAELKQLKKINFHRNQIGQNGLQTISQFNQLL 62
Query: 168 VLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKL 227
LD+ + +++ L +L+ LD+ + + + GA + L+ L + +
Sbjct: 63 CLDISCNGIGIEGAKAVSELNQLKELDITANDIGDIGAKYISQMKELTKLYVRYND---- 118
Query: 228 PNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 287
I GA +++ L+ L +LN+ + D + +S K L
Sbjct: 119 -------------INSQGA--------SSIGELHQLTKLNISYNNIGDEGMKVISGMKHL 157
Query: 288 IHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLT 347
LS+ N + S +S + +LTNLSI + + G+ + L L + +
Sbjct: 158 TKLSVHNNHINVGSSQFISQMKQLTNLSISENHIGIEGVETISQLSQLTRLKISSNQIGA 217
Query: 348 EDAIL 352
AIL
Sbjct: 218 RGAIL 222
>gi|308501663|ref|XP_003113016.1| hypothetical protein CRE_25417 [Caenorhabditis remanei]
gi|308265317|gb|EFP09270.1| hypothetical protein CRE_25417 [Caenorhabditis remanei]
Length = 465
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 154/347 (44%), Gaps = 49/347 (14%)
Query: 68 EAIELRG-ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC--LKELDLSR 124
+ + L+G EN D+ + L L++ C+RVT ++ L G C L L+L
Sbjct: 125 KELSLKGCENIHDSALRTFTSRCPNLEHLSLYRCKRVTDASCENL-GRYCHKLNYLNLEN 183
Query: 125 CVKVTDAGMKHLL-SISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDLGGLPVTDLVLR 182
C +TD M+++ L L +S D G+ ++ + N + LD L+LR
Sbjct: 184 CSSITDRAMRYIGDGCPNLTYLNISWCDAVQDRGVQII--ITNCASLD-------TLILR 234
Query: 183 SLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRL---------SFLNLAWTGVTKLPNIS-- 231
+ LT+ + + G S + +L+ F +NL + ++ I+
Sbjct: 235 GCEGLTENVFGPVEGQMASLKKLNLLQCFQLTDATVQNISNGAMNLEYLCMSNCNQITDR 294
Query: 232 ----------SLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFP 280
+L+ L LS +G + LS + LERL++E +SD T+
Sbjct: 295 SLIALGQTSHNLKVLELSGCNLLGDNGFVQLS----KGCKMLERLDMEDCSLISDITINN 350
Query: 281 LST-FKELIHLSLRNASL-TDVSLHQLSSLSKLTNLSIRD----AVLTNSGLGSFKPPRS 334
LS L LSL + L TD S+ L + + T L I + LT+S L + R+
Sbjct: 351 LSNQCVALRELSLSHCELITDESIQNLVTKHRET-LKILELDNCPQLTDSTLSHLRHCRA 409
Query: 335 LKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELS-VICPSDQIGSNG 380
LK +DL+ +T++AI++F P IE+ + V P+DQ+ + G
Sbjct: 410 LKRIDLYDCQNVTKEAIVRFQHHRPNIEIHAYFAPVTPPADQVVNRG 456
>gi|312092167|ref|XP_003147243.1| hypothetical protein LOAG_11677 [Loa loa]
Length = 358
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 140/345 (40%), Gaps = 100/345 (28%)
Query: 91 YLRSLNVADCRRVTSSALWALTGMTC--LKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+L+ L++ C V +AL + T + C ++ L L +C +VTD+ ++L + +WL
Sbjct: 15 FLKRLSLRGCENVQENALRSFT-LKCPNIEHLSLYKCKRVTDSTCEYL-GRNCHRLVWLD 72
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK-LEYLDL-WGSQVSNRGA- 205
TA +TD LR++ K LEYL++ W V NRG
Sbjct: 73 LENCTA---------------------ITDKSLRAVSEGCKNLEYLNISWCENVQNRGVQ 111
Query: 206 AVLKMFPRLSFL------NLAWTGVTKLPNISS--------------------------L 233
AVL+ P+LS L L T ++ N L
Sbjct: 112 AVLQGCPKLSTLICRGCEGLTETAFAEMRNFCCQLRTVNLLGCFITDDTVANLAAGCPKL 171
Query: 234 ECLNLSFIQQVGAET------------DLVLSLTAL----------QNLNHLERLNLEQT 271
E L LS Q+ DL LS +L +N + LER++LE
Sbjct: 172 EYLCLSSCTQITDRALISLANGCHRLKDLELSGCSLLTDHGFGILAKNCHELERMDLEDC 231
Query: 272 QV-SDATLFPLST-FKELIHLSLRNASL-TDVSLHQLSSLSKLTNLSIRDAV-------- 320
+ +D TL S L++LSL + L TD L QL N ++D +
Sbjct: 232 SLLTDITLDNFSKGCPCLLNLSLSHCELITDAGLRQLC-----LNYHLKDRIQVLELDNC 286
Query: 321 --LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEV 363
+T+ L + R+L+ +DL+ +T+DAI +F P +EV
Sbjct: 287 PQITDISLDYMRQVRTLQRVDLYDCQNITKDAIKRFKNFKPDVEV 331
>gi|72385461|ref|XP_846398.1| leucine-rich repeat protein (LRRP) [Trypanosoma brucei TREU927]
gi|25956236|emb|CAB95328.2| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 1448
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 127/312 (40%), Gaps = 67/312 (21%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+ LG YLR LN+ + ++S + L +L++ +++ ++ L +I TL
Sbjct: 484 VGCLGTLPYLRVLNIKE-AHISSLDFTGIGASKSLLQLNMESITGLSN--VEALANILTL 540
Query: 143 EKLWLSE-TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL---QVLTKLEYLDLWG- 197
EKL L TG+ A GI L +L L +LDL G + LRSL Q + L W
Sbjct: 541 EKLSLHGCTGIDA-GIGCLGNLPQLKMLDLSGTNTDNESLRSLCLSQTVVSLNLSHCWKM 599
Query: 198 ---SQVS----------------NRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSL 233
S +S N G L+ +L L+ T +T N +L
Sbjct: 600 TNVSHISSLEALNELNLSNCFGINAGWEALEKLQQLHVAILSNTHITDRDISHFSNCKNL 659
Query: 234 ECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQ----------------------- 270
L+LSF + +L +TAL N+ LE LNL+
Sbjct: 660 ITLDLSFCNK-------LLDVTALSNITTLEELNLDSCSNIRKGLSVLGELPRLCVLNIK 712
Query: 271 -TQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGS 328
Q+ D+ + L + LSL N DV+ LS+L L L++ SG+G+
Sbjct: 713 GVQLEDSVIVSLGNGNSFVRLSLENCKGFGDVA--PLSNLVTLEELNLHYCDKVTSGMGT 770
Query: 329 FKPPRSLKLLDL 340
L++LDL
Sbjct: 771 LGRLPQLRVLDL 782
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 131/303 (43%), Gaps = 69/303 (22%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
L S N+ D S + ++ L +L +S+C +TDA + ++ LE+L LS
Sbjct: 286 LNSTNIDD------SCVEEISACAKLSKLCISKCNNITDA--TPISQLAALEELNLSNCH 337
Query: 152 LTADGIALLSSLQNLSVLDLGGLPVTDLVLR------SLQVL-----------------T 188
+T GI L L L +LDL G+PV D L+ SL+ L T
Sbjct: 338 ITK-GIGTLGMLLRLRMLDLSGVPVEDNCLKDLCDCGSLERLNISYRIQLTDINPLSNAT 396
Query: 189 KLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL----------------------------A 220
+E L+L G + RG V+ P+L L++
Sbjct: 397 AIEELNLNGCRRITRGIGVVWALPKLRVLHMKDVHLSEPSLDSVGTGGPLVKVSLDNCAG 456
Query: 221 WTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFP 280
+ +T L +I +LE LN IQ+ D++ + L L +L LN+++ +S
Sbjct: 457 FGDMTLLSSIVTLEELN---IQKCA---DIISGVGCLGTLPYLRVLNIKEAHISSLDFTG 510
Query: 281 LSTFKELIHLSLRNASLTDVS-LHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 339
+ K L+ L++ S+T +S + L+++ L LS+ ++G+G LK+LD
Sbjct: 511 IGASKSLLQLNME--SITGLSNVEALANILTLEKLSLHGCTGIDAGIGCLGNLPQLKMLD 568
Query: 340 LHG 342
L G
Sbjct: 569 LSG 571
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 110/255 (43%), Gaps = 54/255 (21%)
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
+HL +I TLE+L +++T + I +S L NL L+L + D + + KL L
Sbjct: 250 RHLFNIGTLEELAITDT-MQLTNIRGISRLTNLKCLELNSTNIDDSCVEEISACAKLSKL 308
Query: 194 DLWGSQVSN-RGAAVLKMFPRLSFLNLAWTGVTK-------------------------- 226
+ S+ +N A + L LNL+ +TK
Sbjct: 309 CI--SKCNNITDATPISQLAALEELNLSNCHITKGIGTLGMLLRLRMLDLSGVPVEDNCL 366
Query: 227 --LPNISSLECLNLSFIQQVGAETDLVLSLTALQNLN------------------HLERL 266
L + SLE LN+S+ Q+ + + + + TA++ LN L L
Sbjct: 367 KDLCDCGSLERLNISYRIQL-TDINPLSNATAIEELNLNGCRRITRGIGVVWALPKLRVL 425
Query: 267 NLEQTQVSDATLFPLSTFKELIHLSLRN-ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 325
+++ +S+ +L + T L+ +SL N A D++L LSS+ L L+I+ SG
Sbjct: 426 HMKDVHLSEPSLDSVGTGGPLVKVSLDNCAGFGDMTL--LSSIVTLEELNIQKCADIISG 483
Query: 326 LGSFKPPRSLKLLDL 340
+G L++L++
Sbjct: 484 VGCLGTLPYLRVLNI 498
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 150/339 (44%), Gaps = 54/339 (15%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
+ E + ++ + L +LN+A C+ +T + AL+ +T L+EL+L C + G++ L
Sbjct: 859 TNDENVRHVSECKSLNTLNLAFCKDITD--VTALSKITMLEELNLDCCHNIR-KGIETLG 915
Query: 138 SISTLEKLWLSETGLTADGIA----LLSSLQNLSVLDL----GGLPVTDLVLRSLQVLTK 189
++ L + E + DG A +L + ++L L+L G + V ++L +
Sbjct: 916 TLPKARILSMKECYM-GDGYAQQCSILGNSKSLVKLNLERSRGRISV-----KALSNVAT 969
Query: 190 LEYLDLWGSQVSNRGAAVLKMF---PRLSFLNLAWTGVTK--LPNIS---SLECLNLSFI 241
LE L L + R + F PRL LNL +T + NIS SL LNLS
Sbjct: 970 LEELVLDHA----RKVCCIPSFSCLPRLRVLNLKYTDINGDVTKNISESKSLRSLNLSHC 1025
Query: 242 QQVGAETDLVLSLTALQ----NLNHLERLN----------------LEQTQVSDATLFPL 281
+ V TD+ + + L N+N + L T+++ + L
Sbjct: 1026 KWV---TDISVLSSLLTLEELNVNCCNGIRKGWESLGKLPLLRVAILSDTKITAKDIACL 1082
Query: 282 STFKELIHLSL-RNASLTDVSL-HQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 339
S+ K+L+ L + L+DV++ +++ SL +L S D + + LG+ R L +
Sbjct: 1083 SSCKKLVKLKFFQCEKLSDVTVVYKIQSLEELIVTSCSDGLKGLNALGTLPRLRFHHLRN 1142
Query: 340 LHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGS 378
+ G + E + IEV EL+ I P I S
Sbjct: 1143 VRGSDISVESIGTSKSLVRLHIEVGEELTDITPLSNITS 1181
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 117/275 (42%), Gaps = 38/275 (13%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
++ + + + LRSLN++ C+ VT ++ + ++ C G + L
Sbjct: 1003 INGDVTKNISESKSLRSLNLSHCKWVTDISVLSSLLTLEELNVN---CCNGIRKGWESLG 1059
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD-LW 196
+ L LS+T +TA IA LSS + L L L + V+ K++ L+ L
Sbjct: 1060 KLPLLRVAILSDTKITAKDIACLSSCKKLVKLKFFQCEK----LSDVTVVYKIQSLEELI 1115
Query: 197 GSQVSN--RGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSL 254
+ S+ +G L PRL F +L + +IS ++ +G LV
Sbjct: 1116 VTSCSDGLKGLNALGTLPRLRFHHLRNV---RGSDIS---------VESIGTSKSLV--- 1160
Query: 255 TALQNLNHLERLNLE-QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 313
RL++E +++D T PLS L LSLR+ + L L +L +
Sbjct: 1161 ----------RLHIEVGEELTDIT--PLSNITSLEELSLRDYRKPPEGVGTLGKLPRLKS 1208
Query: 314 LSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 348
L + + +++S L RS+ L+L W LT+
Sbjct: 1209 LDLGLSRISDSTLYCICLSRSITSLNLDSSWKLTD 1243
>gi|315301496|ref|ZP_07872642.1| internalin A, partial [Listeria ivanovii FSL F6-596]
gi|313630134|gb|EFR98121.1| internalin A [Listeria ivanovii FSL F6-596]
Length = 445
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 88/190 (46%), Gaps = 37/190 (19%)
Query: 113 GMTCLKELD-LSRCVKV--TDAGMKHLLSISTLEKL-WLSETGLTADGIALLSSLQNLSV 168
G+ +K L+ L++ + + TD + L IS L L W++ + L+ L NL
Sbjct: 87 GIQSIKGLEYLTKLINLFLTDNQIADLSPISELTTLNWITLERNRVHDLTALTKLTNLEC 146
Query: 169 LDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLP 228
L + +TD+ + L LTKLE LD+ +QVS+ G L
Sbjct: 147 LTINNNRITDV--KPLANLTKLEILDMDNNQVSDIGG---------------------LA 183
Query: 229 NISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELI 288
N+ LE L L E + V ++AL NL +LE LNL Q QVSD + PL+ K+L
Sbjct: 184 NLGQLETLRL--------ERNRVSDISALTNLINLETLNLFQNQVSDIS--PLAGLKKLK 233
Query: 289 HLSLRNASLT 298
L + N T
Sbjct: 234 RLEINNQVCT 243
>gi|167523190|ref|XP_001745932.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775733|gb|EDQ89356.1| predicted protein [Monosiga brevicollis MX1]
Length = 2039
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 112/247 (45%), Gaps = 24/247 (9%)
Query: 110 ALTGMTCLKELDLS--RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQ--N 165
A G++ L ELDLS R V L +++TL+ L T + + A L +L+ N
Sbjct: 616 AFAGLSALPELDLSNMRITTVAGNAFAGLDALTTLKLLGNPITTIESSAFANLPALKALN 675
Query: 166 LSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF---PRLSFLNLAWT 222
LS L L LP V L L+ L L G+Q++ GA+ F PR+ L+L+
Sbjct: 676 LSHLGLSVLPANTFV-----NLPALQNLTLTGNQLATLGASNQPAFVACPRIRSLDLS-- 728
Query: 223 GVTKLPNISSLECLNLSFIQQVGAETDLVLSLT--ALQNLNHLERLNLEQTQVSDATLFP 280
+ KL I++ L+ + + +L+ SL A NL+ N T L+
Sbjct: 729 -MQKLTAITAHAFSGLTGLTSLNLRNNLITSLATGAFANLSAELASNAPSTLAH--VLYL 785
Query: 281 LSTFKELI-----HLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSL 335
L F LI L +RN LT ++ LS L +LS+ + +T LG F +L
Sbjct: 786 LVCFAALIKCQVTQLDIRNNKLTALASSSFDGLSALQSLSLANMAITKLPLGVFSGLNAL 845
Query: 336 KLLDLHG 342
++L L G
Sbjct: 846 QVLRLDG 852
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 104/243 (42%), Gaps = 34/243 (13%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
L +LN A A A G+T L L+LS C ++STL G
Sbjct: 551 LSALNFAG-NPFNGVAASAFRGLTQLTALNLSHC------------NVSTL-------IG 590
Query: 152 LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF 211
T +L ++ LDL G+ + L ++ L+ L LDL +++
Sbjct: 591 GT------FETLSRVTSLDLSGIKLRTLPSQAFAGLSALPELDLSNMRITTVAGNAFAGL 644
Query: 212 PRLSFLNLAWTGVTKL-----PNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERL 266
L+ L L +T + N+ +L+ LNLS + + ++L ALQNL L
Sbjct: 645 DALTTLKLLGNPITTIESSAFANLPALKALNLSHLGLSVLPANTFVNLPALQNLT-LTGN 703
Query: 267 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 326
L S+ F + LS++ LT ++ H S L+ LT+L++R+ ++T+
Sbjct: 704 QLATLGASNQPAFVACPRIRSLDLSMQK--LTAITAHAFSGLTGLTSLNLRNNLITSLAT 761
Query: 327 GSF 329
G+F
Sbjct: 762 GAF 764
Score = 38.5 bits (88), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 118/265 (44%), Gaps = 24/265 (9%)
Query: 87 GAFRYLRSLNVADCRRVTSSALWAL--TGMTCLKELDLSRCVKVTDAGMKHLLSISTLEK 144
GAFR L +L R +AL ++ + + L L+LS+ V+ A + +++L +
Sbjct: 1435 GAFRDLPALQSIQLRGQQLTALDSMVWSAVPRLTALNLSQQALVSVAPAP-FVGLASLTQ 1493
Query: 145 LWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG 204
L LS +GL L +++ LDL G + + + Q + L LDL +Q+ G
Sbjct: 1494 LNLSHSGLIHLPDQAFEGLSHVTSLDLSGNALQWVGQAAFQGMVALTTLDLSDTQLLALG 1553
Query: 205 AAVLKMFPRLSFLNLAWT-------GVTKLPNISSLECLNLSFIQQVGAETDLVLSLTAL 257
A + P+L+ L L T + LP +++L+ L+ + +QQ+ + AL
Sbjct: 1554 NASVAHLPKLTSLKLPTTLRQLASAALLDLPQLATLD-LSATQVQQLASG--------AL 1604
Query: 258 QNLNHLERLNLEQTQVSDATLFP--LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLS 315
NL L+ L + S TL P + + L L L + L+ L L ++
Sbjct: 1605 SNLAKLDSLIVSP---SLETLVPGCFTNMTGVTSLDLAGTQLAQLEAQVLTGLPALETIN 1661
Query: 316 IRDAVLTNSGLGSFKPPRSLKLLDL 340
+ + + G +F P SL +DL
Sbjct: 1662 LSVSAVRTLGPLAFAGPTSLSAVDL 1686
>gi|374373316|ref|ZP_09630976.1| hypothetical protein NiasoDRAFT_2132 [Niabella soli DSM 19437]
gi|373234289|gb|EHP54082.1| hypothetical protein NiasoDRAFT_2132 [Niabella soli DSM 19437]
Length = 736
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 72/133 (54%), Gaps = 4/133 (3%)
Query: 120 LDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDL 179
L LS+ + VTD +K + S S L L LS T + DGI L+ LQ+L L L G +T
Sbjct: 387 LQLSK-MPVTDEDLKAIGSFSNLRALNLSFTKVKGDGIKYLAGLQHLKQLSLSGTGITTG 445
Query: 180 VLRSLQVLTKLEYLDLWGSQVSNRGAAVLKM-FPRLSFLNLAWTGVTKLPNISSLECLNL 238
L+ L L L +++W + ++++ LK FP+ +F ++ + G T + +S+ +
Sbjct: 446 GLQPLAKLKTLIAIEVWNTAITDKDLTSLKSNFPKAAF-DIGYKGDTVIAKLST-PIITA 503
Query: 239 SFIQQVGAETDLV 251
+ +Q+ + T L+
Sbjct: 504 ANDKQIFSNTSLI 516
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 229 NISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELI 288
+ S+L LNLSF + G D + L LQ HL++L+L T ++ L PL+ K LI
Sbjct: 404 SFSNLRALNLSFTKVKG---DGIKYLAGLQ---HLKQLSLSGTGITTGGLQPLAKLKTLI 457
Query: 289 HLSLRNASLTDVSLHQLSS 307
+ + N ++TD L L S
Sbjct: 458 AIEVWNTAITDKDLTSLKS 476
>gi|224089012|ref|XP_002308601.1| predicted protein [Populus trichocarpa]
gi|222854577|gb|EEE92124.1| predicted protein [Populus trichocarpa]
Length = 360
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 76/138 (55%), Gaps = 7/138 (5%)
Query: 65 HNAEAIELRGENSVDAEWMAYLG---AFRYLRSLNVADCRRVTSSALWALTGMTCLKELD 121
++ A+ L G + V + + +L + R L+ L +A+C R+T + L GM CL+EL+
Sbjct: 173 NSIRALNLEGCSLVTDKGLTFLATGSSSRTLKRLVLAECDRLTDFGVSLLQGMCCLEELN 232
Query: 122 LSRCV-KVTDAGMKHLLSISTLEKLWLSETGLTADG--IALLSSLQNLSVLDLGGLP-VT 177
L+ C KVTD G + SI++L+++ LS +D +A+ + +NL LDL G +T
Sbjct: 233 LAECGPKVTDNGGMAVASIASLKRMNLSWLINVSDITLVAIAGNCRNLVALDLTGCEMIT 292
Query: 178 DLVLRSLQVLTKLEYLDL 195
+R+L LE L L
Sbjct: 293 GTGIRALGYHECLESLVL 310
>gi|290980745|ref|XP_002673092.1| predicted protein [Naegleria gruberi]
gi|284086673|gb|EFC40348.1| predicted protein [Naegleria gruberi]
Length = 498
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/255 (19%), Positives = 107/255 (41%), Gaps = 36/255 (14%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + E Y+G + L+ L++A+ + G K+
Sbjct: 163 NYIGVEGAKYIGEMKQLKQLHIANNN--------------------------IGPEGAKY 196
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ + L L + +T DG +S ++ L+VL++ G + D + + + +L LD+
Sbjct: 197 ISGLEQLTFLNIRANEITVDGAKFISEMKQLTVLNIIGNNICDEGAKFISGMKQLTNLDI 256
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWT----GVTKLPNISSLECLNLSFIQQVGAETDLV 251
+ + GA + ++ LN+ + GV + L LN++ + +G+
Sbjct: 257 SVNNIGENGAKYVSEMMNITKLNIGFNSINDGVKCFGEMKQLTDLNVNS-RCIGSN---- 311
Query: 252 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ + + N L L++ + +S +S K LI L + + + D + +S +++L
Sbjct: 312 -GVEYISSFNQLTHLSIAKNLISLYEAMHISQMKNLIKLDISDNDIGDNGVQSISEMNQL 370
Query: 312 TNLSIRDAVLTNSGL 326
T L++ +T G+
Sbjct: 371 TELNVSSIDITPIGI 385
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/231 (19%), Positives = 99/231 (42%), Gaps = 13/231 (5%)
Query: 132 GMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLE 191
G K++ + L++L ++ + +G +S L+ L+ L++ +T + + + +L
Sbjct: 169 GAKYIGEMKQLKQLHIANNNIGPEGAKYISGLEQLTFLNIRANEITVDGAKFISEMKQLT 228
Query: 192 YLDLWGSQVSNRGAAVLKMFPRLSFL-----NLAWTGVTKLPNISSLECLNLSFIQQVGA 246
L++ G+ + + GA + +L+ L N+ G + + ++ LN+ F
Sbjct: 229 VLNIIGNNICDEGAKFISGMKQLTNLDISVNNIGENGAKYVSEMMNITKLNIGF------ 282
Query: 247 ETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLS 306
+ + + L LN+ + + +S+F +L HLS+ ++ +S
Sbjct: 283 -NSINDGVKCFGEMKQLTDLNVNSRCIGSNGVEYISSFNQLTHLSIAKNLISLYEAMHIS 341
Query: 307 SLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKM 357
+ L L I D + ++G+ S L L++ +T I CKM
Sbjct: 342 QMKNLIKLDISDNDIGDNGVQSISEMNQLTELNV-SSIDITPIGIQYICKM 391
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 54/291 (18%), Positives = 117/291 (40%), Gaps = 23/291 (7%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N++ E Y+ L LN+ +T ++ M L L++ + D G K
Sbjct: 187 NNIGPEGAKYISGLEQLTFLNIR-ANEITVDGAKFISEMKQLTVLNIIGN-NICDEGAKF 244
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ + L L +S + +G +S + N++ L++G + D V + + +L L++
Sbjct: 245 ISGMKQLTNLDISVNNIGENGAKYVSEMMNITKLNIGFNSINDGV-KCFGEMKQLTDLNV 303
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWT--------GVTKLPNISSLECLNLSFIQQVGAE 247
+ + G + F +L+ L++A ++++ N+ L+ + +G
Sbjct: 304 NSRCIGSNGVEYISSFNQLTHLSIAKNLISLYEAMHISQMKNLIKLDISD----NDIGDN 359
Query: 248 TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 307
+ ++ +N L LN+ ++ + + L +L + ++ Q+S
Sbjct: 360 -----GVQSISEMNQLTELNVSSIDITPIGIQYICKMDNLTYLISAHNNIGAKGAKQISE 414
Query: 308 LSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQF-CKM 357
+ L LSI + + G L LD+ G+ D ++F C M
Sbjct: 415 MKHLAQLSIYHNAVGDEGAKFISEMEQLTFLDI--GYNEIGDEGVKFLCGM 463
>gi|344270426|ref|XP_003407045.1| PREDICTED: F-box/LRR-repeat protein 13 [Loxodonta africana]
Length = 680
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 130/289 (44%), Gaps = 27/289 (9%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTC--LKELDLSRCVKVTDAGMKHLL-SISTLEK 144
F L++L++A CR+ T L L G C L LDLS C +++ G +++ S S +
Sbjct: 240 FHNLQNLSLAYCRKFTDKGLQYLNLGKGCHKLTYLDLSGCTQISVQGFRNIANSCSGIMH 299
Query: 145 LWLSETGLTADGI--ALLSSLQNL-SVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQ-- 199
L +++ D AL+ + SV+ +G ++D ++L L + G++
Sbjct: 300 LTINDMPTLTDKCVKALVEKCSRITSVVFIGAPHISDCAFKALST-CNLRKIRFEGNKRI 358
Query: 200 VSNRGAAVLKMFPRLSFLNLA-WTGVTK--------LPNISSLECLNLSFIQQVGAETDL 250
+ + K +P + + + G+T L ++ L N I VG + L
Sbjct: 359 TDSCFKFIDKHYPNIRHIYMVDCKGLTDGSLKSLSVLKQLTVLNLANCVGIGDVGLKQLL 418
Query: 251 VLSLTALQNLNHLERLNLEQT-QVSDATLFPLST-FKELIHLSLRNAS-LTDVSLHQLSS 307
++ + LNL + DA++ LS L +L+LRN LTD+ + + +
Sbjct: 419 DGPVST-----KIRELNLNNCIHLGDASIVRLSERCPNLNYLNLRNCEHLTDLGIEHIVN 473
Query: 308 LSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 356
+ L ++ + V++N GL + + LK L L + +T+ I FCK
Sbjct: 474 IFSLVSVDLSGTVISNEGLMTLSRHKKLKELSLSECYKITDMGIQAFCK 522
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 7/162 (4%)
Query: 66 NAEAIELRGENSVDAEWMAYLGA-FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSR 124
N I G + ++ + +R + + DC+ +T +L +L+ + L L+L+
Sbjct: 346 NLRKIRFEGNKRITDSCFKFIDKHYPNIRHIYMVDCKGLTDGSLKSLSVLKQLTVLNLAN 405
Query: 125 CVKVTDAGMKHLLS--IST-LEKLWLSETGLTADG--IALLSSLQNLSVLDLGGLP-VTD 178
CV + D G+K LL +ST + +L L+ D + L NL+ L+L +TD
Sbjct: 406 CVGIGDVGLKQLLDGPVSTKIRELNLNNCIHLGDASIVRLSERCPNLNYLNLRNCEHLTD 465
Query: 179 LVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA 220
L + + + L +DL G+ +SN G L +L L+L+
Sbjct: 466 LGIEHIVNIFSLVSVDLSGTVISNEGLMTLSRHKKLKELSLS 507
Score = 41.2 bits (95), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 125/287 (43%), Gaps = 52/287 (18%)
Query: 76 NSVDAEWMAYLGAFRYLRS-----------LNVADCRRVTSSALWALTGMTCLKELDLSR 124
N++D M + +Y+ S LN C + L +++ L+EL++S
Sbjct: 141 NAIDFSTMKSMAIDKYITSTLQRWRLNVLRLNFRGCL-LKPKTLKSVSHCRNLQELNVSD 199
Query: 125 CVKVTDAGMKHLL-SISTLEKLWLSETGLTADGIALLS-SLQNLSVLDLGGL-PVTDLVL 181
C +TD M+H+ + L LS TG+T + LL + NL L L TD L
Sbjct: 200 CPTLTDESMRHISEGCPGVLYLNLSNTGITNRTMRLLPRNFHNLQNLSLAYCRKFTDKGL 259
Query: 182 RSLQV---LTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWT-------GVTKLPNI 230
+ L + KL YLDL G +Q+S +G F N+A + + +P +
Sbjct: 260 QYLNLGKGCHKLTYLDLSGCTQISVQG-----------FRNIANSCSGIMHLTINDMPTL 308
Query: 231 SSL-------ECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLE-QTQVSDATL-FPL 281
+ +C ++ + +GA + AL N L ++ E +++D+ F
Sbjct: 309 TDKCVKALVEKCSRITSVVFIGAPHISDCAFKALSTCN-LRKIRFEGNKRITDSCFKFID 367
Query: 282 STFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLG 327
+ + H+ + + LTD SL LS L +LT L++ + V G+G
Sbjct: 368 KHYPNIRHIYMVDCKGLTDGSLKSLSVLKQLTVLNLANCV----GIG 410
>gi|75761815|ref|ZP_00741747.1| S-layer protein [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|74490691|gb|EAO53975.1| S-layer protein [Bacillus thuringiensis serovar israelensis ATCC
35646]
Length = 678
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 106/219 (48%), Gaps = 24/219 (10%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEK- 144
+ Y+ +L R + + A++ + LK +DL T ++ + I LE
Sbjct: 169 IAGLEYMTNLEKLTLRESNVTDISAISKLRSLKYVDL------TSNSIESIHPIGQLENI 222
Query: 145 --LWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
L+L + ++ + LS ++ + LDL G + D+ + L L+ ++ L L +Q+S+
Sbjct: 223 NMLFLRDNKIS--DLTPLSKMKKIKTLDLIGNNIKDI--QPLFTLSTMKQLYLANNQISD 278
Query: 203 RGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL-NLSFIQQVGAETDLVLSLTALQNLN 261
L RL+ + L W G K+ N+ S+ + NL ++ +E + ++ L L
Sbjct: 279 -----LNGIDRLNNVELLWIGNNKINNVESISKMSNLIELEIADSE---IKDISPLSQLG 330
Query: 262 HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 300
+L+ LNLE+ +SD + PLST L ++L ++DV
Sbjct: 331 NLQVLNLEENYISDIS--PLSTLTNLHEINLGANEISDV 367
>gi|30685551|ref|NP_180865.2| receptor like protein 27 [Arabidopsis thaliana]
gi|330253685|gb|AEC08779.1| receptor like protein 27 [Arabidopsis thaliana]
Length = 808
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 106/229 (46%), Gaps = 22/229 (9%)
Query: 110 ALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVL 169
+L G+ L+ L+LS + + +++ LE L+LS G + S+L L++L
Sbjct: 92 SLFGLQHLRYLNLSNNNFTSASLPSGFGNLNRLEVLYLSSNGFLGQVPSSFSNLSQLNIL 151
Query: 170 DL------GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL---A 220
DL G P +Q LTKL L L + S + L P LS L+L
Sbjct: 152 DLSHNELTGSFPF-------VQNLTKLSILVLSYNHFSGTIPSSLLTLPFLSSLDLRENY 204
Query: 221 WTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFP 280
TG + PN S+ L ++ E ++ ++ L NL HL+ L+ + D LF
Sbjct: 205 LTGSIEAPNSSTSSRLEFMYLGNNHFEGQILEPISKLINLKHLDLSFLKTSYPIDLNLF- 263
Query: 281 LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 329
S+FK L+ L L SL S ++S SK+ L++ + VL + GL F
Sbjct: 264 -SSFKSLVRLVLSGNSLLATS---ITSDSKIP-LNLENLVLLSCGLIEF 307
>gi|7267528|emb|CAB78010.1| receptor protein kinase-like protein [Arabidopsis thaliana]
gi|7321074|emb|CAB82121.1| receptor protein kinase-like protein [Arabidopsis thaliana]
Length = 1027
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 90/172 (52%), Gaps = 20/172 (11%)
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
+T A + +++ L +L LS +T + +S++ +S L L G ++ + +++L
Sbjct: 472 ITGAIPPEIWNMTQLSQLDLSSNRITGELPESISNINRISKLQLNGNRLSGKIPSGIRLL 531
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT--------GVTKLPNISSLECLNLS 239
T LEYLDL ++ S+ L PRL ++NL+ G+TKL S L+ L+LS
Sbjct: 532 TNLEYLDLSSNRFSSEIPPTLNNLPRLYYMNLSRNDLDQTIPEGLTKL---SQLQMLDLS 588
Query: 240 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 291
+ Q G ++ +LQN LERL+L +S + P +FK+++ L+
Sbjct: 589 YNQLDG---EISSQFRSLQN---LERLDLSHNNLS-GQIPP--SFKDMLALT 631
>gi|320169763|gb|EFW46662.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 684
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 97/202 (48%), Gaps = 5/202 (2%)
Query: 139 ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
++ L L+LS +T+ + S L L+ L L G P+T + + LT L LD++ +
Sbjct: 56 LTALNSLFLSNNPITSIAVNAFSGLTALTQLSLAGNPLTTIPDNTFTGLTALTRLDVYVT 115
Query: 199 QVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSL--TA 256
Q+++ A+ P L L+L +T NI+S L+ + ++ + + S+ +A
Sbjct: 116 QIASISASAFAGLPVLEVLSLNDNQIT---NIASNTFTGLTALTRLSLFNNNITSIPASA 172
Query: 257 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 316
+L+ L L+L Q++ + EL +LSL + +T +S + L+ LT L +
Sbjct: 173 FADLSALTYLDLAGNQMTSLSANAFIGLTELTYLSLTSNEITSISPAAFTGLTALTELVL 232
Query: 317 RDAVLTNSGLGSFKPPRSLKLL 338
+ ++ + F SL LL
Sbjct: 233 ENNLIASISANDFAGLTSLNLL 254
Score = 44.7 bits (104), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 112/258 (43%), Gaps = 8/258 (3%)
Query: 88 AFRYLRSLN--VADCRRVTSSALWALTGMTCLKELDLSR--CVKVTDAGMKHLLSISTLE 143
AF L +LN +TS A+ A +G+T L +L L+ + D L +++ L+
Sbjct: 52 AFSGLTALNSLFLSNNPITSIAVNAFSGLTALTQLSLAGNPLTTIPDNTFTGLTALTRLD 111
Query: 144 KLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNR 203
++A A L L+ VL L +T++ + LT L L L+ + +++
Sbjct: 112 VYVTQIASISASAFAGLPVLE---VLSLNDNQITNIASNTFTGLTALTRLSLFNNNITSI 168
Query: 204 GAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHL 263
A+ L++L+LA +T L + + L+++ E + S A L L
Sbjct: 169 PASAFADLSALTYLDLAGNQMTSLSANAFIGLTELTYLSLTSNEITSI-SPAAFTGLTAL 227
Query: 264 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
L LE ++ + + L L +RN +T +S + + L LT L + ++T+
Sbjct: 228 TELVLENNLIASISANDFAGLTSLNLLRMRNNQITSLSANGFAGLPSLTELDLDLNLMTS 287
Query: 324 SGLGSFKPPRSLKLLDLH 341
+F SL LL +
Sbjct: 288 IDASAFAGLTSLNLLSVQ 305
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 112/274 (40%), Gaps = 42/274 (15%)
Query: 100 CRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIAL 159
++ S + A G+ L+ L L+ ++T+ ++ L +L L +T+ +
Sbjct: 114 VTQIASISASAFAGLPVLEVLSLNDN-QITNIASNTFTGLTALTRLSLFNNNITSIPASA 172
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKM--------- 210
+ L L+ LDL G +T L + LT+L YL L +++++ A
Sbjct: 173 FADLSALTYLDLAGNQMTSLSANAFIGLTELTYLSLTSNEITSISPAAFTGLTALTELVL 232
Query: 211 ------------FPRLSFLN-----------LAWTGVTKLPNISSLECLNLSFIQQVGAE 247
F L+ LN L+ G LP+++ L+ L+L+ + + A
Sbjct: 233 ENNLIASISANDFAGLTSLNLLRMRNNQITSLSANGFAGLPSLTELD-LDLNLMTSIDA- 290
Query: 248 TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 307
+A L L L+++ Q++ + + L L L + +T +S + +
Sbjct: 291 -------SAFAGLTSLNLLSVQNNQITSISANGFAGLPSLTALGLESNQITSISANAFAG 343
Query: 308 LSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 341
L+ L L + +T+ +F SL +L LH
Sbjct: 344 LTSLNFLRLEGNQITSISANAFAAVTSLSVLSLH 377
>gi|2924785|gb|AAC04914.1| putative leucine-rich repeat disease resistance protein
[Arabidopsis thaliana]
Length = 800
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 106/229 (46%), Gaps = 22/229 (9%)
Query: 110 ALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVL 169
+L G+ L+ L+LS + + +++ LE L+LS G + S+L L++L
Sbjct: 84 SLFGLQHLRYLNLSNNNFTSASLPSGFGNLNRLEVLYLSSNGFLGQVPSSFSNLSQLNIL 143
Query: 170 DL------GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL---A 220
DL G P +Q LTKL L L + S + L P LS L+L
Sbjct: 144 DLSHNELTGSFPF-------VQNLTKLSILVLSYNHFSGTIPSSLLTLPFLSSLDLRENY 196
Query: 221 WTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFP 280
TG + PN S+ L ++ E ++ ++ L NL HL+ L+ + D LF
Sbjct: 197 LTGSIEAPNSSTSSRLEFMYLGNNHFEGQILEPISKLINLKHLDLSFLKTSYPIDLNLF- 255
Query: 281 LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 329
S+FK L+ L L SL S ++S SK+ L++ + VL + GL F
Sbjct: 256 -SSFKSLVRLVLSGNSLLATS---ITSDSKIP-LNLENLVLLSCGLIEF 299
>gi|290993827|ref|XP_002679534.1| predicted protein [Naegleria gruberi]
gi|284093151|gb|EFC46790.1| predicted protein [Naegleria gruberi]
Length = 305
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 103/234 (44%), Gaps = 12/234 (5%)
Query: 110 ALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVL 169
AL GM L L++S ++ G K + + LEKL L + +G +S ++NL+ L
Sbjct: 39 ALQGMNNLTSLNIS-SQQIGPEGAKLVSGVKQLEKLILVFNNVGTEGAKYISEMENLTSL 97
Query: 170 DLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRL-SFLNLAWTGVTKLP 228
+ + D L + KL LD+ + + G ++ +L SF++ + ++
Sbjct: 98 IIRSNNIGDEGAIHLSGMKKLTNLDVSDNMIREDGMRAIRNMTQLRSFVDCGSCALEEVS 157
Query: 229 NISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELI 288
+ L L++S LS A+ N+L L++ T + D L +S + +L
Sbjct: 158 KMDQLTYLDVSH----------NLSGAAIGKFNNLTWLSMVNTCIGDNELELISKYPKLT 207
Query: 289 HLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 342
L + N +T + LS + +L L I D + G+ + L L++ G
Sbjct: 208 KLFVSNNFITSEGVKPLSEMKQLKALHIGDNGINEEGVKIISEMKQLTELNVEG 261
>gi|290994342|ref|XP_002679791.1| predicted protein [Naegleria gruberi]
gi|284093409|gb|EFC47047.1| predicted protein [Naegleria gruberi]
Length = 300
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 102/265 (38%), Gaps = 54/265 (20%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N++ E Y+ + L +L + + + ++G+ L EL + + D G
Sbjct: 59 GLNNLGKEGTKYISEMKQLTNLEINN-NNIQEEGAKFISGLKQLTELSI-HFNNIGDVGT 116
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
KHL + L +L + E + +G+ + ++ L+ LD+ + + + +L L
Sbjct: 117 KHLSELKQLTRLNIGENNIGDEGVKHILEMKQLTDLDISNNNIRHKGSEYISGMNQLRIL 176
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLS 253
D+ + GA + +L+ LN+AW
Sbjct: 177 DINSCNIDPIGAQKISEMKQLTDLNIAW-------------------------------- 204
Query: 254 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 313
Q D +S K+L L L N ++D+ +S +SKLTN
Sbjct: 205 -----------------NQFGDEGAKFISDMKQLTTLELFNCDISDIGAKCVSEMSKLTN 247
Query: 314 LSIRDAVLTNSGLGSFKPPRSLKLL 338
L I + L++ G+ + ++KL+
Sbjct: 248 LDIGENNLSDEGV---RAVSNMKLM 269
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 92/222 (41%), Gaps = 28/222 (12%)
Query: 133 MKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 192
MKH L+ + + W+ E +G +S L NL++LD+ G D+V ++K++
Sbjct: 1 MKHNLTSLNISRNWIGE-----EGAKYISELDNLTILDIHG---NDIVANGANHISKMKR 52
Query: 193 LDLWGSQVSNRGAAVLKMFPRLSFL--------NLAWTGVTKLPNISSLECLNLSF--IQ 242
+ ++N G K + L N+ G + + L L++ F I
Sbjct: 53 ITTLSVGLNNLGKEGTKYISEMKQLTNLEINNNNIQEEGAKFISGLKQLTELSIHFNNIG 112
Query: 243 QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 302
VG + L L L RLN+ + + D + + K+L L + N ++
Sbjct: 113 DVGTK--------HLSELKQLTRLNIGENNIGDEGVKHILEMKQLTDLDISNNNIRHKGS 164
Query: 303 HQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGW 344
+S +++L L I + +G+ K +L DL+ W
Sbjct: 165 EYISGMNQLRILDINSCNI--DPIGAQKISEMKQLTDLNIAW 204
>gi|270003031|gb|EEZ99478.1| hypothetical protein TcasGA2_TC000052 [Tribolium castaneum]
Length = 389
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 92 LRSLNVADCRRVTSSAL-WALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET 150
LRSL+++ C R+T +AL + + L+EL L RCV +TD G+ ++ ++ +L L+L
Sbjct: 258 LRSLDLSWCPRITDAALEYIACDLNQLEELTLDRCVHITDIGIGYISTMLSLSALYLRWC 317
Query: 151 GLTAD-GIALLSSLQNLSVLDLGGLP 175
D G+ L ++NL +L L G P
Sbjct: 318 SQIRDFGLQHLCGMRNLQILSLAGCP 343
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 107/266 (40%), Gaps = 42/266 (15%)
Query: 64 KHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLS 123
KH + LR + D + L + L L +A C +T + LWA + L LS
Sbjct: 103 KH-IHTLSLRCSSITDRGLESLLDHLQALYELELAGCNEITEAGLWACLNPR-IVSLTLS 160
Query: 124 RCVKVTDAGMKHLLS-ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLR 182
C+ V D + + + L + L +T + S Q+ S
Sbjct: 161 DCINVADEAVGAVAQLLPALYEFSLQAYHVTDAALGYFSPKQSNS--------------- 205
Query: 183 SLQVLTKLEYLDLWGSQVSNRGAA-VLKMFPRLSFLNLAWTGVTKLP---------NISS 232
L L W +++N G ++ P L+ L+L +G +K+ N+
Sbjct: 206 ----LNILRLHSCW--EITNHGVVNIVHSLPNLTVLSL--SGCSKITDDGVELIAENLQK 257
Query: 233 LECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLS 291
L L+LS+ ++ TD L A +LN LE L L++ ++D + +ST L L
Sbjct: 258 LRSLDLSWCPRI---TDAALEYIAC-DLNQLEELTLDRCVHITDIGIGYISTMLSLSALY 313
Query: 292 LRNAS-LTDVSLHQLSSLSKLTNLSI 316
LR S + D L L + L LS+
Sbjct: 314 LRWCSQIRDFGLQHLCGMRNLQILSL 339
>gi|374294979|ref|YP_005045170.1| Leucine Rich Repeat (LRR)-containing protein [Clostridium
clariflavum DSM 19732]
gi|359824473|gb|AEV67246.1| Leucine Rich Repeat (LRR)-containing protein [Clostridium
clariflavum DSM 19732]
Length = 139
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 71/121 (58%), Gaps = 17/121 (14%)
Query: 195 LWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK---LPNISSLECLNLSFIQQVGAETDLV 251
++ + +S ++L F +LS+LNL++ ++ L N+S+LECL LS + +
Sbjct: 1 MYSNNIS--DISILTNFTKLSYLNLSYNNISNISILENLSNLECLFLS--------NNNI 50
Query: 252 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
++ L+NL +L RLNL +SD + L L++L+LR+ +++++S L +L+KL
Sbjct: 51 SDISPLKNLTNLWRLNLSNNNISDVS--SLKNLTGLLYLNLRHNNISNIS--PLKNLTKL 106
Query: 312 T 312
T
Sbjct: 107 T 107
>gi|302793791|ref|XP_002978660.1| hypothetical protein SELMODRAFT_109190 [Selaginella moellendorffii]
gi|300153469|gb|EFJ20107.1| hypothetical protein SELMODRAFT_109190 [Selaginella moellendorffii]
Length = 735
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 94/208 (45%), Gaps = 16/208 (7%)
Query: 114 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLG- 172
+T L++L L R + L ++ L L L + T + LS L+NL LDL
Sbjct: 522 LTSLRKLILERADASAGSIPSFLANLKNLTVLNLQGSWFTGSIPSSLSKLKNLQTLDLSD 581
Query: 173 GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KL 227
G +T + L L LEYLDL G++ S L P+L FL+++ T V+ +L
Sbjct: 582 GFRLTGSIPAFLGSLQNLEYLDLSGTKFSGSIPPSLGNLPKLRFLDISNTLVSSSIPVEL 641
Query: 228 PNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVS----DATLFPLST 283
++SLE L +S + G D L NL L+ L L Q ++ LS+
Sbjct: 642 GKLTSLETLRISGTKAAGRIPD------TLGNLKKLKVLELSQNAGMRGPIPSSFGQLSS 695
Query: 284 FKELIHLSLRNASLTDVSLHQLSSLSKL 311
KEL S+ SL QLS L KL
Sbjct: 696 LKELSVSSIGLTGQIPSSLGQLSRLVKL 723
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 92/185 (49%), Gaps = 17/185 (9%)
Query: 160 LSSLQNLSVLDLG-GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN 218
LS L+NL LDL GL +T + L L LEYLDL G++ S L P+L FL+
Sbjct: 182 LSKLKNLQTLDLSDGLRLTGSIPAFLGGLQNLEYLDLSGTKFSGSIPPSLGNLPKLRFLD 241
Query: 219 LAWTGVT-----KLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQV 273
++ T V+ K+ ++SLE L +S + G D L NL L+ L L Q
Sbjct: 242 ISNTLVSSSIPVKIGKLTSLETLRISGTKAAGRIPD------TLGNLKKLKVLELSQNAG 295
Query: 274 SDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPR 333
+ S+F +L L + S T ++ SSL +L+ L ++ V++NS GS P
Sbjct: 296 MRGPI--PSSFGQLSSLEELSVSSTGLTGQIPSSLGQLSRL-VKLDVMSNSLSGSI--PE 350
Query: 334 SLKLL 338
SL LL
Sbjct: 351 SLGLL 355
>gi|196229523|ref|ZP_03128388.1| hypothetical protein CfE428DRAFT_1553 [Chthoniobacter flavus
Ellin428]
gi|196226755|gb|EDY21260.1| hypothetical protein CfE428DRAFT_1553 [Chthoniobacter flavus
Ellin428]
Length = 582
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 90/225 (40%), Gaps = 48/225 (21%)
Query: 147 LSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAA 206
L ET LT A+L SL + L L G V D V+ L+ L+ L L G++ S G A
Sbjct: 215 LDETPLTTADYAILDSLSEVPELTLSGTAVKDSVMEKLRPFHTLKSLTLNGAKPSPAGYA 274
Query: 207 VLKMFP-----------------------------RLSFLNLAWTGVTKLPNISSLECLN 237
VL P RL+ L + + +++LE +
Sbjct: 275 VLPSLPELRDLQLNDTDTKDEAMKTVFQCRKLQHLRLANLTITDAAFADIGKLTALEEIG 334
Query: 238 LSFIQQVGAET-----------------DLVLS--LTALQNLNHLERLNLEQTQVSDATL 278
L+ + ++G+ +VLS + L LE + + + DA +
Sbjct: 335 LTALDKIGSPAFAHFPECRALKRVYLGGFIVLSGMIENLGKCKDLEAITMPAAGLKDADV 394
Query: 279 FPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
PL T +L L L N+++T + S+LT+LS+ +A N
Sbjct: 395 APLGTLMKLKSLDLSNSAVTGAFIDSWQQHSQLTSLSLSNAAGVN 439
Score = 41.2 bits (95), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 117/293 (39%), Gaps = 42/293 (14%)
Query: 55 IFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGM 114
+ PSL E+ ++L ++ D E M + R L+ L +A+ +T +A + +
Sbjct: 275 VLPSLPEL-----RDLQLNDTDTKD-EAMKTVFQCRKLQHLRLANLT-ITDAAFADIGKL 327
Query: 115 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS------------------------ET 150
T L+E+ L+ K+ H L++++L
Sbjct: 328 TALEEIGLTALDKIGSPAFAHFPECRALKRVYLGGFIVLSGMIENLGKCKDLEAITMPAA 387
Query: 151 GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAA--VL 208
GL +A L +L L LDL VT + S Q ++L L L + N +
Sbjct: 388 GLKDADVAPLGTLMKLKSLDLSNSAVTGAFIDSWQQHSQLTSLSLSNAAGVNDSTCKEIE 447
Query: 209 KMFPRLSFL--NLAWTGVTK---LPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHL 263
FP+L L +A +G + ++ F + G D V L+ + L L
Sbjct: 448 HTFPKLEQLTVKIAASGFSSEGVAALARLRALRSVRF-EGDGFNDDCVSELSHCETLTSL 506
Query: 264 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 316
++ + Q+++A + L+ + L LSL +TDV++ + L N+ I
Sbjct: 507 ---SIVKAQLTEAGVVALARYPHLADLSLNYPPITDVAMKAFARCKDLKNIRI 556
>gi|395816685|ref|XP_003781826.1| PREDICTED: F-box/LRR-repeat protein 2 isoform 2 [Otolemur
garnettii]
Length = 348
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 152/321 (47%), Gaps = 25/321 (7%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTC-LKELDLSRCVKVTDAGMKHLL-SISTLEKLWL 147
R + LN+ C ++T S ++L+ LK LDL+ CV +T++ +K + LE L L
Sbjct: 29 RNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSITNSSLKGISEGCRNLEYLNL 88
Query: 148 S-ETGLTADGI-ALLSSLQNLSVLDLGGLP-VTDLVLRSLQ-VLTKLEYLDLWG-SQVSN 202
S +T DGI AL+ + L L L G + D L+ +Q +L L+L S++++
Sbjct: 89 SWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKHIQNYCHELVSLNLQSCSRITD 148
Query: 203 RGAA-VLKMFPRLSFLNLAWTGVTKLPNIS----SLECLNLSFIQQVGAE--TDLVLSLT 255
G + + RL L L +G + L + S L C L ++ TD +L
Sbjct: 149 EGVVQICRGCHRLQALCL--SGCSNLTDASLTALGLNCPRLQILEAARCSHLTDAGFTLL 206
Query: 256 ALQNLNHLERLNLEQTQ-VSDATLFPLSTF-KELIHLSLRNASL-TDVSLHQLSSLS--- 309
A +N + LE+++LE+ ++D+TL LS +L LSL + L TD + LS+ +
Sbjct: 207 A-RNCHDLEKMDLEECILITDSTLIQLSIHCPKLQALSLSHCELITDDGILHLSNSTCGH 265
Query: 310 -KLTNLSIRDAVL-TNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHEL 367
+L L + + +L T+ L + L+ L+L+ +T I + P ++V
Sbjct: 266 ERLRVLELDNCLLITDVALEHLENCLGLERLELYDCQQVTRAGIKRMRAQLPHVKVHAYF 325
Query: 368 SVICPSDQIGSNGPSPSRTSL 388
+ + P + +G R +
Sbjct: 326 APVTPPTAVAGSGQRLCRCCV 346
>gi|171914729|ref|ZP_02930199.1| hypothetical protein VspiD_26170 [Verrucomicrobium spinosum DSM
4136]
Length = 347
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 120 LDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDL 179
LDL+R VTDA +K ++ L +L L +T +T G+ L +L++L+ ++L G VTD
Sbjct: 225 LDLARTA-VTDAALKTVVQFPRLTRLDLRKTKVTDKGVEQLGALKHLTYVNLYGTEVTDA 283
Query: 180 VLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
L +L + L + LW ++ ++ G A LK
Sbjct: 284 SLATLAGIKTLRNIYLWETKATDAGVAKLK 313
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 62/123 (50%), Gaps = 9/123 (7%)
Query: 256 ALQNL----NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
++QNL +++ L+L +T V+DA L + F L L LR +TD + QL +L L
Sbjct: 211 SIQNLLVLKDNVVHLDLARTAVTDAALKTVVQFPRLTRLDLRKTKVTDKGVEQLGALKHL 270
Query: 312 TNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGW--LLTEDAILQFCKMHPRIEVWHELSV 369
T +++ +T++ L + ++L+ + L W T+ + + P+ E+ H + +
Sbjct: 271 TYVNLYGTEVTDASLATLAGIKTLRNIYL---WETKATDAGVAKLKAALPQAEIVHNVVI 327
Query: 370 ICP 372
P
Sbjct: 328 AAP 330
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%)
Query: 253 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 312
+L + L RL+L +T+V+D + L K L +++L +TD SL L+ + L
Sbjct: 236 ALKTVVQFPRLTRLDLRKTKVTDKGVEQLGALKHLTYVNLYGTEVTDASLATLAGIKTLR 295
Query: 313 NLSIRDAVLTNSGLGSFK 330
N+ + + T++G+ K
Sbjct: 296 NIYLWETKATDAGVAKLK 313
>gi|291391263|ref|XP_002712147.1| PREDICTED: F-box and leucine-rich repeat protein 13 [Oryctolagus
cuniculus]
Length = 739
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 111/241 (46%), Gaps = 21/241 (8%)
Query: 66 NAEAIELRGENSVDAEWMAYLGA-FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSR 124
N I G + ++ + + + ++DC+ +T S+L +L + L L+L+
Sbjct: 405 NLRKIRFEGNKRITDACFKFIDKNYPNINHIYMSDCKGITDSSLKSLATLKQLTVLNLAN 464
Query: 125 CVKVTDAGMKHLLSIST---LEKLWLSE-TGLTADGIALLSS-LQNLSVLDLGGLP-VTD 178
C ++ D G+KH L L +L LS L D + LS NL+ L L +TD
Sbjct: 465 CGRIGDMGIKHFLDGPVSQRLRELNLSNCVHLGDDSVLRLSERCPNLNYLSLRNCEHLTD 524
Query: 179 LVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNIS------- 231
+ ++ + L +DL G+ +SN G VL +L L+L+ G K+ ++
Sbjct: 525 QGIENIVNILSLVSVDLSGTIISNEGLMVLSRHKKLKELSLSDCG--KITDVGIQAFCKS 582
Query: 232 --SLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIH 289
+LE L++S+ Q+ +T L++ + NL L +++DA + LS +H
Sbjct: 583 SRTLEHLDVSYCPQLSDDTIRALAIYCV-NLTSLSVAGCP--KITDAAMEMLSAKCHYLH 639
Query: 290 L 290
+
Sbjct: 640 I 640
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 127/286 (44%), Gaps = 21/286 (7%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLK--ELDLSRCVKVTDAGMKHLL-SISTLEK 144
F L++L++A CR+ T L L+ G C K LDLS C +++ G K++ S S +
Sbjct: 299 FYNLQNLSLAYCRKFTDKGLQYLSLGNGCHKLICLDLSGCTQISVQGFKNIANSCSGIMH 358
Query: 145 LWLSETGLTADGI--ALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQVS 201
L +++ D AL+ +++ + G P ++D ++L L + G++
Sbjct: 359 LTINDMPTLTDNCVKALVEKCPSITSVTFIGSPHISDCAFKALTA-CNLRKIRFEGNKRI 417
Query: 202 NRGAA--VLKMFPRLSFLNLA-WTGVTK-----LPNISSLECLNLSFIQQVG-AETDLVL 252
+ K +P ++ + ++ G+T L + L LNL+ ++G L
Sbjct: 418 TDACFKFIDKNYPNINHIYMSDCKGITDSSLKSLATLKQLTVLNLANCGRIGDMGIKHFL 477
Query: 253 SLTALQNLNHLERLNLEQTQVSDATLFPLST-FKELIHLSLRNAS-LTDVSLHQLSSLSK 310
Q L L N + D ++ LS L +LSLRN LTD + + ++
Sbjct: 478 DGPVSQRLRELNLSNC--VHLGDDSVLRLSERCPNLNYLSLRNCEHLTDQGIENIVNILS 535
Query: 311 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 356
L ++ + +++N GL + LK L L +T+ I FCK
Sbjct: 536 LVSVDLSGTIISNEGLMVLSRHKKLKELSLSDCGKITDVGIQAFCK 581
>gi|432883266|ref|XP_004074238.1| PREDICTED: F-box/LRR-repeat protein 20-like isoform 1 [Oryzias
latipes]
Length = 432
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 156/342 (45%), Gaps = 26/342 (7%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC-LKELDLSRCVK 127
+ LRG SV DA + R + LN+ C ++T S +L+ L++LDL+ CV
Sbjct: 92 LSLRGCLSVGDASMKTFAQNCRNIEVLNLNGCTKITDSTCLSLSKFCSKLRQLDLTSCVS 151
Query: 128 VTDAGMKHLLS----ISTLEKLWLSETGLTADGI-ALLSSLQNLSVLDLGGLP-VTDLVL 181
+++ +K L + TL W + +T DGI AL L L L G + D L
Sbjct: 152 ISNHSLKALSDGCRMLETLNLSWCDQ--ITRDGIEALARGCMGLRALFLRGCTQLDDGAL 209
Query: 182 RSLQV-LTKLEYLDLWG-SQVSNRG-AAVLKMFPRLSFLNLAWTGVTKLPNISS--LECL 236
+ Q +L +++ +Q+++ G ++ + +L L ++ G ++++ L C
Sbjct: 210 KHFQKHCPELTTINMQSCTQITDEGLVSLCRGCHKLQVLCVSGCGNITDASLTALGLNCP 269
Query: 237 NLSFIQQVGAE--TDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTF-KELIHLSL 292
L ++ TD ++ A +N + LE+++LE+ V+D TL LS L LSL
Sbjct: 270 RLKILEAARCSHVTDAGFTVLA-RNCHELEKMDLEECILVTDNTLVQLSIHCPRLQALSL 328
Query: 293 RNASL-TDVSLHQLSSLS----KLTNLSIRDA-VLTNSGLGSFKPPRSLKLLDLHGGWLL 346
+ L TD + LSS + +LT L + + ++T+ L K L+ ++L+ +
Sbjct: 329 SHCELITDDGIRALSSSTCGQERLTVLELDNCPLITDVTLEHLKSCHRLERIELYDCQQV 388
Query: 347 TEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSL 388
T I + P I+V + + P + G R +
Sbjct: 389 TRAGIKRIRAHLPEIKVHAYFAPVTPPPSVHGGGQRLCRCCI 430
>gi|320169700|gb|EFW46599.1| protein tyrosine kinase [Capsaspora owczarzaki ATCC 30864]
Length = 1026
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 100/227 (44%), Gaps = 12/227 (5%)
Query: 101 RRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALL 160
++TS + A TG+T L +LDLS ++T ++ L +L L+ + +
Sbjct: 121 NKLTSLSANAFTGLTALAQLDLSMN-QITSIHATAFSDLTALTQLSLTNNIIRTIPSSAF 179
Query: 161 SSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA 220
+ L L+ L+LGG T + + L+ L YL L+ ++ A L+FL L
Sbjct: 180 TGLTALNTLNLGGNLFTAIPANAFTGLSALNYLSLFACLITVISANAFTGLTALTFLTLQ 239
Query: 221 WTGVTKLP-----NISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 275
+ +P +++L+ L LS Q LS A +L+ L +L+L ++
Sbjct: 240 SNQILNIPANAFAGLTALQFLYLSSAQITS------LSANAFTDLSALTQLDLSYNMITS 293
Query: 276 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 322
+ + L L L +T +S + + LS LT L + + +T
Sbjct: 294 LSANTFTGLSALTRLDLSYNMITSLSANTFTGLSALTQLYLFENQIT 340
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 121/269 (44%), Gaps = 16/269 (5%)
Query: 77 SVDAEWMAYLGAFRYLR-SLNVADCRRVTSSALWALTGMTCLKELDLS--RCVKVTDAGM 133
S+ A A L A +YL S N ++T + A TG+T L LDLS R K+ +
Sbjct: 5 SIPANAFAGLTALQYLELSYN-----QLTGISAQAFTGLTALNYLDLSNNRITKIPGSLF 59
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
L ++TL + T L + L+SL +++ + +T++V + L+ +
Sbjct: 60 TGLTMLTTLSLQFNHITSLATNAFTGLTSLTQVTLQNNN---ITNIVATTFTGLSSVTQT 116
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLS 253
DL +++++ A L+ L+L+ +T I + +L+ + Q+ +++ +
Sbjct: 117 DLSYNKLTSLSANAFTGLTALAQLDLSMNQITS---IHATAFSDLTALTQLSLTNNIIRT 173
Query: 254 L--TALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 311
+ +A L L LNL + + L +LSL +T +S + + L+ L
Sbjct: 174 IPSSAFTGLTALNTLNLGGNLFTAIPANAFTGLSALNYLSLFACLITVISANAFTGLTAL 233
Query: 312 TNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
T L+++ + N +F +L+ L L
Sbjct: 234 TFLTLQSNQILNIPANAFAGLTALQFLYL 262
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 95/234 (40%), Gaps = 13/234 (5%)
Query: 110 ALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVL 169
A TG+T L L L + ++ + ++ L+ L+LS +T+ + L L+ L
Sbjct: 226 AFTGLTALTFLTL-QSNQILNIPANAFAGLTALQFLYLSSAQITSLSANAFTDLSALTQL 284
Query: 170 DLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLP- 228
DL +T L + L+ L LDL + +++ A L+ L L +T +P
Sbjct: 285 DLSYNMITSLSANTFTGLSALTRLDLSYNMITSLSANTFTGLSALTQLYLFENQITSIPA 344
Query: 229 ----NISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTF 284
+++L L L Q D LTA L +L L T+++ +
Sbjct: 345 DAFAGLTALTQLFLFENQITSIPADAFAGLTA------LTQLELSHTRITSISANAFRGL 398
Query: 285 KELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP-PRSLKL 337
L L L + L + + + L L L++ D LT G FK P L L
Sbjct: 399 TALTALYLHSVQLNSIPANAFTDLPTLQRLALNDNPLTTLPPGLFKGLPNGLAL 452
>gi|407410013|gb|EKF32614.1| hypothetical protein MOQ_003536 [Trypanosoma cruzi marinkellei]
Length = 835
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 146/317 (46%), Gaps = 55/317 (17%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTS-SALWALTGMTCLKELDLSRCVKVTDAGMKHL 136
+ E +A++ + L+ + + +C ++ S + L +L G L+ L +SR +V+D G++ L
Sbjct: 252 ITEEGLAFISSCNSLQHIQLDNCMKLQSINCLGSLLG---LRTLSVSR-NRVSDVGIQSL 307
Query: 137 LSISTLEKLWL-----------------------SETGLTADGIALLSSLQNLSVLDLGG 173
++ LE+L L +E +T +G A L++ + L L
Sbjct: 308 SNLKNLEQLRLVSFNRLSSVEPVVCLDKLLELDLTENRVTDEGCAALANCGQIQKLTLAS 367
Query: 174 L-PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA-WTGVTKLPNIS 231
V+D+ R + LT L +LDL + V + +L + RL L++A +GV + +
Sbjct: 368 CRCVSDV--RWICALTSLRFLDLSKTHVRSADLQLLTVCQRLEELHVASCSGVKDVSFVE 425
Query: 232 ---SLECLNLS--FIQQVGAET---DLVLSLTALQNLNHLERLNL------------EQT 271
SL+ L+L+ I+ G ++ L+ +LQ+ L ++ E T
Sbjct: 426 GLLSLKHLDLTDTSIKDAGTQSLRKCTALTFLSLQDCRFLTDIHFVEPLNNLLSLNLEGT 485
Query: 272 QVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 330
+V DA + PL +L LSLR+ LTDV L L L +L + +T+ G+
Sbjct: 486 EVVDANIIPLMHCTKLELLSLRHCLFLTDVRC--LRELKALKSLDLSGTYVTDEGISDVS 543
Query: 331 PPRSLKLLDLHGGWLLT 347
SL+ +DL L+T
Sbjct: 544 QCISLERIDLSECCLIT 560
>gi|283778456|ref|YP_003369211.1| hypothetical protein Psta_0665 [Pirellula staleyi DSM 6068]
gi|283436909|gb|ADB15351.1| hypothetical protein Psta_0665 [Pirellula staleyi DSM 6068]
Length = 397
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 100/225 (44%), Gaps = 26/225 (11%)
Query: 97 VADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADG 156
+A CR + S +LW ++ D +K + I +++ L + + +T +G
Sbjct: 154 LASCRELVSISLWG---------------PEIEDDHLKAVAGIPSVQHLQVIRSSITDEG 198
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFP---- 212
+ + +NL+ L++ +TD L+SL L KL L+L G+ V+++ + F
Sbjct: 199 LQHFAERENLATLEIYVAAITDAGLKSLVNLPKLRKLELLGTSVTDQSMPTIGRFRSLRQ 258
Query: 213 -RLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 271
RL +++ G+T L LE L +S G D L L +L ++ T
Sbjct: 259 LRLDAHSISDEGLTFLSRNEKLEVLLVS-----GCPIDGT-GFAKLCELQNLRLVDASST 312
Query: 272 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 316
++D L +++ L L +R + +T L L +L +L I
Sbjct: 313 NINDEGLAAIASLPGLTLLEIRQSKVTGKGLQHLERSEQLRSLLI 357
>gi|384248806|gb|EIE22289.1| RNI-like protein [Coccomyxa subellipsoidea C-169]
Length = 508
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 136/291 (46%), Gaps = 33/291 (11%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N+ E ++ LG L SL V ++S+AL L + L L L ++ G +
Sbjct: 154 NADLCELLSVLGP--KLTSLEVQQAHELSSAALKGLAASSRLGALSLEGIPRMGKEGWRA 211
Query: 136 L--------LSISTLEKLW---LSETGLTADGIALLSSLQNLSVLDLGGL--PVTDLVLR 182
L L+ISTL +L L + ADG+A L +L++L LDL PV V+
Sbjct: 212 LSSLTALTRLAISTLTRLQDLRLKVREIDADGVAALQTLRDLRSLDLEVWVSPVRPRVIE 271
Query: 183 SLQVLTKLEY--LDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKL--PNISSLECLNL 238
+L T+LE L+ + S + R L+ PRL+ L+L +G + N+ +L L+
Sbjct: 272 ALLSFTRLEAVRLEAYSSLETARCFCALRHLPRLAHLDLRLSGSSFALDDNLEALASLSA 331
Query: 239 SFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFP-------LSTFKELIHLS 291
+ +L+AL + +++L L SDA++ L EL HL+
Sbjct: 332 CSKLASLSLAAPAPALSALSACSGIQKLRL-----SDASMLSNRITGTELPRLPELRHLN 386
Query: 292 LRNAS-LTDVSLHQLSS-LSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
L + S LTD L +++ LT L ++ L+++GL + SL+ LDL
Sbjct: 387 LLHCSALTDAGLAAVAAQYPVLTGLQLKSGSLSDAGLTAIATLTSLERLDL 437
>gi|332030619|gb|EGI70307.1| F-box/LRR-repeat protein 14 [Acromyrmex echinatior]
Length = 837
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 72/123 (58%), Gaps = 15/123 (12%)
Query: 92 LRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWL--- 147
L L++ DC+R++ AL ++ G+T LK ++LS CV +TD+G+KHL +S+L +L L
Sbjct: 616 LEHLSLQDCQRLSDEALRHVSLGLTTLKSINLSFCVCITDSGVKHLARMSSLRELNLRSC 675
Query: 148 ---SETGLT--ADGIALLSSLQNLSVLDLGGLPVTDLVLRSL-QVLTKLEYLDLWGSQVS 201
S+ G+ A+G + ++SL ++S D + D L + Q L L+ L L Q+S
Sbjct: 676 DNISDIGMAYLAEGGSRITSL-DVSFCD----KIGDQALVHISQGLFNLKSLSLSACQIS 730
Query: 202 NRG 204
+ G
Sbjct: 731 DEG 733
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 122/254 (48%), Gaps = 42/254 (16%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWL 147
+ L L + C +T++ L + G+ LK LDL C V+D G+ HL ++
Sbjct: 554 LKNLEHLELGGCCNITNTGLLLIAWGLKKLKRLDLRSCWHVSDLGIAHLAGLNR------ 607
Query: 148 SETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV-LTKLEYLDL-WGSQVSNRGA 205
TADG +L++LS+ D L +D LR + + LT L+ ++L + +++ G
Sbjct: 608 ----ETADGNL---ALEHLSLQDCQRL--SDEALRHVSLGLTTLKSINLSFCVCITDSG- 657
Query: 206 AVLKMFPRLSFL---------NLAWTGVTKLPNISS-LECLNLSFIQQVGAETDLVLSLT 255
+K R+S L N++ G+ L S + L++SF ++G + + +S
Sbjct: 658 --VKHLARMSSLRELNLRSCDNISDIGMAYLAEGGSRITSLDVSFCDKIGDQALVHIS-- 713
Query: 256 ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLS-SLSKLTN 313
Q L +L+ L+L Q+SD + ++ L L++ S LTD LH ++ S+ L
Sbjct: 714 --QGLFNLKSLSLSACQISDEGICKIA----LETLNIGQCSRLTDRGLHTVAESMKNLKC 767
Query: 314 LSIRDAV-LTNSGL 326
+ + +T SGL
Sbjct: 768 IDLYGCTKITTSGL 781
>gi|357467279|ref|XP_003603924.1| Receptor kinase [Medicago truncatula]
gi|355492972|gb|AES74175.1| Receptor kinase [Medicago truncatula]
Length = 936
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 109/253 (43%), Gaps = 21/253 (8%)
Query: 77 SVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHL 136
SVDA L F L+S N + S + L+ LDL C + D +
Sbjct: 93 SVDA-----LANFTLLQSFNASGFYLPGSIPDLFGVSLRSLRVLDLRSC-SIFDVIPNTI 146
Query: 137 LSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLW 196
++++L L+LS+ LT + L L LSVLDL G +T + S L L LDL
Sbjct: 147 GNLTSLTGLYLSDNNLTGNAPDSLGQLSALSVLDLSGNSLTGNIPESFGSLANLSSLDLS 206
Query: 197 GSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLP----NISSLECLNLSFIQQVGAETDLVL 252
G+ S + RL LNL+ G+ LP ++SL L+LS G
Sbjct: 207 GNFFSGSIPLGIGTLSRLQHLNLSGNGLNSLPAQLGGLTSLVDLDLSENSFSGG------ 260
Query: 253 SLTALQNLNHLERLNLEQTQVSD---ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 309
L L+ L +L R+ L + ++ A F +S +L + LR + T ++ SL
Sbjct: 261 VLPDLRGLRNLRRMLLGNSMLNGPLPADFFTVSL--QLQTVVLRKNNFTGSLPVEMWSLP 318
Query: 310 KLTNLSIRDAVLT 322
+LT + + T
Sbjct: 319 RLTFVDVSSNSFT 331
>gi|343421695|emb|CCD18730.1| hypothetical protein, conserved [Trypanosoma vivax Y486]
Length = 582
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 123/266 (46%), Gaps = 35/266 (13%)
Query: 81 EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
+ + L A +L +L + + +T+ +L + L+ELD S C ++D + H+ ++
Sbjct: 331 DGIGSLVALPFLCTLKLRN-TAITNESLRDICESESLEELDASSCTALSD--VFHISVLN 387
Query: 141 TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 200
TL +L LS G+ ++SL L LD+ G P+T+ LR L+ LE + L
Sbjct: 388 TLVELNLSFCPNLVKGMEAIASLPFLRALDISGTPITNHCLRGLRKSNSLETVSLRSCN- 446
Query: 201 SNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNL 260
NL T V L IS+L L+L G L + L L
Sbjct: 447 -----------------NL--TDVFYLSKISTLLRLDL------GCCISLQKGVGTLGKL 481
Query: 261 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDA 319
L LNLE T+ ++ + LST + L L L + +L+DVSL L+++ L L I +
Sbjct: 482 PRLRILNLEGTRAANDWIIGLSTSRSLAVLILSSCLALSDVSL--LANIEPLEELDISNC 539
Query: 320 VLTNSGLGS-FKPP--RSLKLLDLHG 342
V SG + K P R LK+ D++
Sbjct: 540 VSIRSGAEALLKLPQIRVLKMYDVNA 565
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 118/274 (43%), Gaps = 48/274 (17%)
Query: 141 TLEKLWLSETGLTADGIALLSSLQNLSVL-DLGGLPVTDL------VLRSLQVLTKLEYL 193
+LE+L + T LT I + + +LS+L +LG L V + V S+ L L L
Sbjct: 74 SLEQLRIC-TRLTHIEIIMCKGIFDLSILANLGSLEVLSVRGSRVHVTGSIGGLKNLREL 132
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNL----AWTGVTKLPNISSLECLNLSFIQQVGAETD 249
DL G++V + L P L+ +NL + V+ L +I SL+ L+L + +
Sbjct: 133 DLSGTRVQDEVFYELSENPNLTKVNLRQCQGLSDVSPLADIESLQELDLGLCRSINE--- 189
Query: 250 LVLSLTALQNLNHLERLNLEQTQVSDATLF-----------------------PLSTFKE 286
+ L L +L LNLE+ V +LF PLS K
Sbjct: 190 ---GVQDLAELPNLRVLNLEKVNVPSDSLFELCKSRSLEKLNLSSCKRLLDVSPLSEIKT 246
Query: 287 LIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLL 346
L+ L L + +L L L L++R+ +T+ L SL++L+L L
Sbjct: 247 LVELDLSLCCSLFTGVSELGKLQCLRILNLRNTAVTDHSLPGLSESDSLEILNLSSCRGL 306
Query: 347 TEDAILQFCKMHPRIEVWHELSVICPS--DQIGS 378
T + L+ K ++++ + CP+ D IGS
Sbjct: 307 TNVSPLKEIKSLVQLDLSN-----CPALRDGIGS 335
Score = 38.1 bits (87), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 115/288 (39%), Gaps = 46/288 (15%)
Query: 81 EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
E + L LR LN+ V S +L+ L L++L+LS C ++ D + L I
Sbjct: 189 EGVQDLAELPNLRVLNLEKVN-VPSDSLFELCKSRSLEKLNLSSCKRLLD--VSPLSEIK 245
Query: 141 TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 200
TL +L LS G++ L LQ L +L+L VTD L L LE L+L
Sbjct: 246 TLVELDLSLCCSLFTGVSELGKLQCLRILNLRNTAVTDHSLPGLSESDSLEILNLS---- 301
Query: 201 SNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSFIQQVGAETDLVLSLTALQNL 260
S RG T V+ L I SL L+LS A D + SL AL L
Sbjct: 302 SCRG----------------LTNVSPLKEIKSLVQLDLS---NCPALRDGIGSLVALPFL 342
Query: 261 NHLERLN----------------LEQTQVSDAT----LFPLSTFKELIHLSLRNASLTDV 300
L+ N LE+ S T +F +S L+ L+L
Sbjct: 343 CTLKLRNTAITNESLRDICESESLEELDASSCTALSDVFHISVLNTLVELNLSFCPNLVK 402
Query: 301 SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 348
+ ++SL L L I +TN L + SL+ + L LT+
Sbjct: 403 GMEAIASLPFLRALDISGTPITNHCLRGLRKSNSLETVSLRSCNNLTD 450
>gi|297813345|ref|XP_002874556.1| hypothetical protein ARALYDRAFT_489780 [Arabidopsis lyrata subsp.
lyrata]
gi|297320393|gb|EFH50815.1| hypothetical protein ARALYDRAFT_489780 [Arabidopsis lyrata subsp.
lyrata]
Length = 1019
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 88/172 (51%), Gaps = 20/172 (11%)
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
++ A + +++ L +L LS +T + +S++ +S L L G ++ + +++L
Sbjct: 467 ISGAIPPEIWNMTQLNQLDLSFNRITGELPESISNINRISKLQLNGNQLSGKIPSGIRLL 526
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT--------GVTKLPNISSLECLNLS 239
T LEYLDL +Q A L PRL ++NL+ G+TKL S L+ L+LS
Sbjct: 527 TNLEYLDLSSNQFGFEIPATLNNLPRLYYMNLSRNDLDQTIPEGLTKL---SQLQMLDLS 583
Query: 240 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 291
+ Q G ++ +LQN LERL+L +S P S FK+++ L+
Sbjct: 584 YNQLDG---EISSQFGSLQN---LERLDLSHNNLSGQ--IPTS-FKDMLALT 626
>gi|158300505|ref|XP_320406.4| AGAP012123-PA [Anopheles gambiae str. PEST]
gi|157013191|gb|EAA00209.4| AGAP012123-PA [Anopheles gambiae str. PEST]
Length = 462
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Query: 92 LRSLNVADCRRVTSSAL-WALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET 150
LR+L+++ C R+T +AL + + L+EL L RCV +TD G+ ++ ++ +L L+L
Sbjct: 331 LRALDLSWCPRITDAALEYIACDLNQLEELTLDRCVHITDIGVGYISTMLSLSALFLRWC 390
Query: 151 GLTAD-GIALLSSLQNLSVLDLGGLP 175
D G+ L S++NL VL L G P
Sbjct: 391 TQIRDFGLQHLCSMRNLQVLSLAGCP 416
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 110/272 (40%), Gaps = 57/272 (20%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLK----ELD 121
+ ++ LR + D A L + L L +A C +T + LWA CL L
Sbjct: 177 HVHSLSLRCSSISDRGLEALLDHLQSLFELELAGCNEITEAGLWA-----CLTPRIVSLS 231
Query: 122 LSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVL 181
L+ C+ V D + G A LL SL S L VTD L
Sbjct: 232 LADCINVADEAV-----------------GAVAQ---LLPSLYEFS---LQAYHVTDAAL 268
Query: 182 -----RSLQVLTKLEYLDLWGSQVSNRGAA-VLKMFPRLSFLNLAWTGVTKLP------- 228
+ L+ L W +++N G ++ P L+ L+L +G +K+
Sbjct: 269 GYFSPKQSHSLSILRLQSCW--ELTNHGVVNIVHSLPHLTVLSL--SGCSKVTDDGVELI 324
Query: 229 --NISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQ-TQVSDATLFPLSTFK 285
N+ L L+LS+ ++ TD L A +LN LE L L++ ++D + +ST
Sbjct: 325 AENLQKLRALDLSWCPRI---TDAALEYIAC-DLNQLEELTLDRCVHITDIGVGYISTML 380
Query: 286 ELIHLSLR-NASLTDVSLHQLSSLSKLTNLSI 316
L L LR + D L L S+ L LS+
Sbjct: 381 SLSALFLRWCTQIRDFGLQHLCSMRNLQVLSL 412
>gi|83629923|gb|ABC26623.1| internalin E [Listeria monocytogenes]
Length = 498
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 109/215 (50%), Gaps = 24/215 (11%)
Query: 112 TGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDL 171
T + + +L T GM++L ++S LE L++ +T ++ L++L ++ L L
Sbjct: 70 TDLDSITQLSAKSAGITTIEGMQYLTNLSELE---LTDNQIT--DVSPLANLTKITELGL 124
Query: 172 GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL---AWTGVTKLP 228
G P+ D+ +L L L+ L L + +++ + L L LNL T ++ L
Sbjct: 125 SGNPLKDV--SALAGLKSLKMLHLIYTDITDVTS--LAGLTNLQELNLDINQITDISPLA 180
Query: 229 NISSLECLNLSFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELI 288
+S+L+ L+L + Q V LT + NL+ L LN E +VSD + PL++ L
Sbjct: 181 ALSNLQTLSLGYTQ--------VSDLTPIANLSKLTILNAENCKVSD--ISPLASLSSLT 230
Query: 289 HLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 323
+ LR ++DVS L+++ L+ + + D ++TN
Sbjct: 231 EVYLRENQISDVS--PLANIPNLSIIELTDQIITN 263
>gi|54294508|ref|YP_126923.1| hypothetical protein lpl1579 [Legionella pneumophila str. Lens]
gi|53754340|emb|CAH15819.1| hypothetical protein lpl1579 [Legionella pneumophila str. Lens]
Length = 464
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 111/256 (43%), Gaps = 17/256 (6%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
++SLN+ + + AL L L+L R + D G K L + +L L LS
Sbjct: 46 IKSLNLRN-NNIGDEGAKALAANQSLSTLNL-RANNIGDEGAKALAANQSLSTLNLSYNN 103
Query: 152 LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF 211
+ A+G L++ Q+LS L+L + D ++L L L+L + + + GA L
Sbjct: 104 IGAEGAKALAANQSLSTLNLRANNIGDEGAKALAANQSLSTLNLRYNNIGDEGAKALAAN 163
Query: 212 PRLSFLNL-----AWTGVTKLPNISSLECLNLSF--IQQVGAETDLVLSLTALQNLNHLE 264
LS LNL G L SL LNLS+ I+ GA+ +L A Q L
Sbjct: 164 QSLSTLNLRNNNIGDEGAKALAANQSLSTLNLSYNNIRAEGAK-----ALAANQ---SLS 215
Query: 265 RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS 324
LNL + L+ + L L+L ++ D L++ L+ L++ + +
Sbjct: 216 TLNLRYNNIRAEGAKALAANQSLSTLNLSYNNIGDEGAKALAANQSLSTLNLSYNNIGDE 275
Query: 325 GLGSFKPPRSLKLLDL 340
G + +SL L+L
Sbjct: 276 GAKALAANQSLSTLNL 291
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 82/185 (44%), Gaps = 8/185 (4%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N++ AE L A + L +LN++ + AL L L+LS + D G K
Sbjct: 222 NNIRAEGAKALAANQSLSTLNLS-YNNIGDEGAKALAANQSLSTLNLSYN-NIGDEGAKA 279
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
L + +L L LS + +G L++ Q+LS L+L + ++L L L+L
Sbjct: 280 LAANQSLSTLNLSYNNIGDEGAKALAANQSLSTLNLSYNNIRAEGAKALAANQSLSTLNL 339
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSFIQQVGAETDL 250
+ + + GA L LS LNL++ G L SL LNLS+ +G E
Sbjct: 340 SYNNIGDEGAKALAANQSLSTLNLSYNNIRAEGAKALAANQSLSTLNLSY-NNIGDEGAK 398
Query: 251 VLSLT 255
L+ T
Sbjct: 399 ALNET 403
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 114/270 (42%), Gaps = 13/270 (4%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N++ E L A + L +LN+ + AL L L+L R + D G K
Sbjct: 126 NNIGDEGAKALAANQSLSTLNL-RYNNIGDEGAKALAANQSLSTLNL-RNNNIGDEGAKA 183
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
L + +L L LS + A+G L++ Q+LS L+L + ++L L L+L
Sbjct: 184 LAANQSLSTLNLSYNNIRAEGAKALAANQSLSTLNLRYNNIRAEGAKALAANQSLSTLNL 243
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSFIQQVGAETDL 250
+ + + GA L LS LNL++ G L SL LNLS+ +G E
Sbjct: 244 SYNNIGDEGAKALAANQSLSTLNLSYNNIGDEGAKALAANQSLSTLNLSY-NNIGDEG-- 300
Query: 251 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 310
+L A Q L LNL + L+ + L L+L ++ D L++
Sbjct: 301 AKALAANQ---SLSTLNLSYNNIRAEGAKALAANQSLSTLNLSYNNIGDEGAKALAANQS 357
Query: 311 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 340
L+ L++ + G + +SL L+L
Sbjct: 358 LSTLNLSYNNIRAEGAKALAANQSLSTLNL 387
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.133 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,196,219,797
Number of Sequences: 23463169
Number of extensions: 234091319
Number of successful extensions: 700607
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1109
Number of HSP's successfully gapped in prelim test: 8753
Number of HSP's that attempted gapping in prelim test: 661712
Number of HSP's gapped (non-prelim): 32848
length of query: 443
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 297
effective length of database: 8,933,572,693
effective search space: 2653271089821
effective search space used: 2653271089821
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 78 (34.7 bits)