BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>013424
MEYERIHKAQTGIISPSKLRMKLIGPHHNRKKDGSNSNSARTSPSRLDDSEFVRNSLLNG
GFDDEAPSLEVASEKGAGEVVLGHNQGEQASFQPNETLPRENTEVSRVKMQQFSKGDSVN
LSAIHPMRMHEDDNLDYDSNASSSSFEFHKGERSMQNHMARSFSRPMPSKWNDAEKWIMN
RQIIQANYAKKNALHNQANRLPATNMVRVVPEYGTYDHKPSTVRAADTKRVDFCQTASHT
LEKFSFVPSGTHQAHGGNAMIDSCTQSKDLEEVIQTDVPCTKSSSENESVVPAIRSVCMR
DMGTEMTPVASQEPSRTATPVGATTPLRSPTSSIPSTPRGRAPASTPMEQTGIDESQHPV
ENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAAWASKDEQGKNTSSAEKNSDMEELERI
EYEKRASAWAEAEKSKHIARFHL

High Scoring Gene Products

Symbol, full name Information P value
AT1G30320 protein from Arabidopsis thaliana 6.1e-71
AT2G02170 protein from Arabidopsis thaliana 1.8e-46
AT1G67590 protein from Arabidopsis thaliana 1.1e-15

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  013424
        (443 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2204197 - symbol:AT1G30320 "AT1G30320" species...   718  6.1e-71   1
TAIR|locus:2051673 - symbol:AT2G02170 "AT2G02170" species...   424  1.8e-46   2
TAIR|locus:2008625 - symbol:AT1G67590 "AT1G67590" species...   151  1.1e-15   2


>TAIR|locus:2204197 [details] [associations]
            symbol:AT1G30320 "AT1G30320" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0005886 "plasma membrane"
            evidence=IDA] Pfam:PF03763 EMBL:CP002684 GenomeReviews:CT485782_GR
            GO:GO:0005886 EMBL:AC025295 InterPro:IPR005516 EMBL:BT006124
            EMBL:AK118811 IPI:IPI00542493 PIR:E86427 RefSeq:NP_174322.1
            UniGene:At.40574 PRIDE:Q9C8G3 EnsemblPlants:AT1G30320.1
            GeneID:839912 KEGG:ath:AT1G30320 TAIR:At1g30320 eggNOG:NOG317405
            HOGENOM:HOG000238733 InParanoid:Q9C8G3 OMA:DAEKWIM PhylomeDB:Q9C8G3
            ProtClustDB:CLSN2682078 Genevestigator:Q9C8G3 Uniprot:Q9C8G3
        Length = 509

 Score = 718 (257.8 bits), Expect = 6.1e-71, P = 6.1e-71
 Identities = 201/464 (43%), Positives = 264/464 (56%)

Query:     1 MEYERIHKAQTGIISPSKLRMKLIGPHHNRKKDGS--NSNSARTSPSRL---DDSEFVRN 55
             M+YERI K Q  IISP+KLRMKL+GP +N K++GS  NSNS+RTSPSRL   DDSEF +N
Sbjct:     1 MDYERIQKVQKSIISPTKLRMKLMGPLNNMKREGSKSNSNSSRTSPSRLQIPDDSEFSKN 60

Query:    56 SLL--NGGFDDE--APSLEVASEKGAGEVVLGHNQGE-QASFQPNE-TLPRENTEVSRVK 109
             SLL  N   DD+  A + ++   K   E VL   + + Q S    E  +PREN +    +
Sbjct:    61 SLLASNSYSDDDVAATTTDIEVAKLPNEPVLYPTENDNQGSKDRCEGVVPRENDQP---R 117

Query:   110 MQQFSKGDSVNLSAIHPMRMHEDDNLDYDSNASSSSFEFHK--GERSMQNHMARSF-SRP 166
             +QQF KGD +N+++ H MR  ED+NLDYDSNASSSSFEFH+  GERS QNH +R + SR 
Sbjct:   118 LQQFRKGD-LNMASPHIMRPQEDENLDYDSNASSSSFEFHRARGERSNQNHGSRGYPSRQ 176

Query:   167 MPSKWNDAEKWIMNRQIIQANYAKKNALHNQANRLPATNMVRVVPEYGTYDHKPSTVRAA 226
             MPSKWNDAEKWIM+RQ +     +KN    Q NR+P    VR+VP+   Y+H  S     
Sbjct:   177 MPSKWNDAEKWIMSRQNM---VMRKNG---QGNRIP----VRIVPDNAGYEHNKS----- 221

Query:   227 DTKRVDFCQTAS-HTLEKF-SFVPSGTH----QAHGGNAMIDSCTQSKDLEEVIQTDVPC 280
                R+D CQ++     EKF + VPS  H    Q +GG+++ID  TQS DL +        
Sbjct:   222 ---RMDLCQSSQVDGFEKFPNVVPSAPHPILTQEYGGDSLIDQSTQSNDLAD-------- 270

Query:   281 TKSSSENESVVPAIRSVCMRDMGTEMTPVASQEPSRTATPVGAXXXXXXXXXXXXXXXRG 340
               SS ++ +  PAIRSVCMRDMGTEMTP+ SQEPSR+ TPVGA               RG
Sbjct:   271 --SSHDHTTGGPAIRSVCMRDMGTEMTPIPSQEPSRSVTPVGATTPLRSPTSSLPSTPRG 328

Query:   341 RAPASTPMEQTGIDESQHPVENSK--RDLSEQEIKEKTRREIVALGV---QLGKMNI--A 393
               P  + M +    E     E +K  R++    + +  +  I A      +  K N   A
Sbjct:   329 GQPEESSMSKNTRRELSEEEEKAKTRREIVALGV-QLGKMNIAAWASKEEEENKKNNGDA 387

Query:   394 AWASKDEQGKNTSSAEKNSDMEELERIEYEK-RASAWAEAEKSK 436
               A K E  K  ++ E+    +   R + E+ R  AW   EK+K
Sbjct:   388 EEAQKIEFEKRATAWEEAEKSKHNARYKREEIRIQAWESQEKAK 431

 Score = 400 (145.9 bits), Expect = 3.0e-37, P = 3.0e-37
 Identities = 96/213 (45%), Positives = 128/213 (60%)

Query:   230 RVDFCQTASHTLEKFSFVPSGTHQA-HGGNAMIDSCTQSKDLEEVIQTDVPCTKSSSENE 288
             R+D CQ++   ++ F   P+    A H    +         +++  Q++     SS ++ 
Sbjct:   222 RMDLCQSSQ--VDGFEKFPNVVPSAPHP--ILTQEYGGDSLIDQSTQSN-DLADSSHDHT 276

Query:   289 SVVPAIRSVCMRDMGTEMTPVASQEPSRTATPVGAXXXXXXXXXXXXXXXRGRAPASTPM 348
             +  PAIRSVCMRDMGTEMTP+ SQEPSR+ TPVGA               RG  P  + M
Sbjct:   277 TGGPAIRSVCMRDMGTEMTPIPSQEPSRSVTPVGATTPLRSPTSSLPSTPRGGQPEESSM 336

Query:   349 EQTGIDESQHPVENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAAWASKDEQGKNTSSA 408
              +           N++R+LSE+E K KTRREIVALGVQLGKMNIAAWASK+E+     + 
Sbjct:   337 SK-----------NTRRELSEEEEKAKTRREIVALGVQLGKMNIAAWASKEEE----ENK 381

Query:   409 EKNSDMEELERIEYEKRASAWAEAEKSKHIARF 441
             + N D EE ++IE+EKRA+AW EAEKSKH AR+
Sbjct:   382 KNNGDAEEAQKIEFEKRATAWEEAEKSKHNARY 414


>TAIR|locus:2051673 [details] [associations]
            symbol:AT2G02170 "AT2G02170" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005886
            "plasma membrane" evidence=ISM;IDA] [GO:0008150
            "biological_process" evidence=ND] Pfam:PF03763 GO:GO:0005886
            EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC005936
            InterPro:IPR005516 HOGENOM:HOG000238733 EMBL:AF385733 EMBL:BT003022
            IPI:IPI00526082 PIR:G84433 RefSeq:NP_001077869.1 RefSeq:NP_027421.1
            UniGene:At.13362 PRIDE:Q9ZUM1 EnsemblPlants:AT2G02170.1
            EnsemblPlants:AT2G02170.2 GeneID:814748 KEGG:ath:AT2G02170
            TAIR:At2g02170 eggNOG:NOG267380 InParanoid:Q9ZUM1 OMA:MKTRREI
            PhylomeDB:Q9ZUM1 ProtClustDB:CLSN2687932 ArrayExpress:Q9ZUM1
            Genevestigator:Q9ZUM1 Uniprot:Q9ZUM1
        Length = 486

 Score = 424 (154.3 bits), Expect = 1.8e-46, Sum P(2) = 1.8e-46
 Identities = 114/315 (36%), Positives = 161/315 (51%)

Query:   133 DNLDYDSNASSSS-FEFHKGERSMQNHMA--RSFSRPMPSKWNDAEKWIMNRQIIQANYA 189
             DN++   + S+SS FEF K E+   N     RSFS+P PSKW+DA+KWI +     AN  
Sbjct:    98 DNVNEIKSVSASSVFEFQKTEKEKVNQRMPIRSFSKPAPSKWDDAQKWIASPT---ANRP 154

Query:   190 KKNALHNQANRL-PATNMVRVVPEYGTYDHKPSTVRAADTKRVDFCQTASHTLEKFSFVP 248
             K   +    ++  P+      +      +H+   V   DTKR+D  Q       KF    
Sbjct:   155 KTGQVQVPGSKKGPSFGRQSSMKIVEVAEHR--VVEEPDTKRIDVSQVKKDMGNKFGSWE 212

Query:   249 SGTHQAHGGNAMIDSCTQSKDLEEVIQTDVPCTKSSSENESVVP--AIRSVCMRDMGTEM 306
               ++             ++  +E   + ++    SS       P    RSV MRDMGTEM
Sbjct:   213 VDSYTTVDSYVKPVLMVENSIVESATEVNLSRHDSSVATAFAQPPSTARSVSMRDMGTEM 272

Query:   307 TPVASQEPSRTATPVGAXXXXXXXXXXXXXXXRGRAPASTPMEQTGIDESQHPVENSKRD 366
             TP+ASQEPSR  TP+ A                 R+P S+     G   S  P+ N  ++
Sbjct:   273 TPIASQEPSRNGTPIRATTPI-------------RSPISSEPSSPGRQASASPMSN--KE 317

Query:   367 LSEQEIKEKTRREIVALGVQLGKMNIAAWASKDEQGKNTSSAEKNSDMEELERIEYEKRA 426
             LSE+E++ KTRREI+ LG QLGK NIAAWASK+++ K+ S++ K     +  +   E RA
Sbjct:   318 LSEKELQMKTRREIMVLGTQLGKFNIAAWASKEDEDKDASTSLKTKASLQTSKSVSEARA 377

Query:   427 SAWAEAEKSKHIARF 441
             +AW EAEK+KH+ARF
Sbjct:   378 TAWEEAEKAKHMARF 392

 Score = 80 (33.2 bits), Expect = 1.8e-46, Sum P(2) = 1.8e-46
 Identities = 26/79 (32%), Positives = 40/79 (50%)

Query:     1 MEYERIHKAQT----GIISPSKLR-MKLIGPHHNRKKDGSNSNSARTSPSRLDDSEFVRN 55
             M+YERI K Q     G  SP KLR M L+G    + ++  ++ + R+  +++DD      
Sbjct:     1 MDYERIGKTQVTSSGGGFSPGKLRSMLLLGVDRKKNEEEESTPTMRSGSNQIDDPRVYVA 60

Query:    56 SLLNGGFDDEAPSLEVASE 74
             S    G DD    ++V SE
Sbjct:    61 S----GLDD-CKDVDVVSE 74


>TAIR|locus:2008625 [details] [associations]
            symbol:AT1G67590 "AT1G67590" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM;IDA] [GO:0005886 "plasma membrane"
            evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
            Pfam:PF03763 EMBL:CP002684 GO:GO:0005634 EMBL:AC008113
            UniGene:At.23765 EMBL:AC011020 InterPro:IPR005516 IPI:IPI00531181
            PIR:G96700 RefSeq:NP_564900.1 UniGene:At.35630 PRIDE:Q9SR48
            EnsemblPlants:AT1G67590.1 GeneID:843080 KEGG:ath:AT1G67590
            TAIR:At1g67590 InParanoid:Q9SR48 OMA:RAKFMAR PhylomeDB:Q9SR48
            ProtClustDB:CLSN2689063 Genevestigator:Q9SR48 Uniprot:Q9SR48
        Length = 347

 Score = 151 (58.2 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
 Identities = 55/180 (30%), Positives = 81/180 (45%)

Query:   272 EVIQTDVPCTKSSSENESVV-PA--IRSVCMRDMGTEMTPVASQEPSRTATPVGAXXXXX 328
             EV   +V C +S    ES + P   IRSVC+RDMGTEMTP+ SQEPSRTATPV A     
Sbjct:   119 EVETKNVDCGESVWRKESSINPTAVIRSVCVRDMGTEMTPIGSQEPSRTATPVRATTPVG 178

Query:   329 XXXXXX--XXXXRGRAPA---STPMEQTGIDESQHPVEN----SKRDLSEQEIK-----E 374
                         RG A      T  E   ++ +     N    SK+ +S  E +     E
Sbjct:   179 RSPVTSPVRASQRGEAVGVVMETVTEVRRVESNNSEKVNGFVESKKAMSAMEARAMAWDE 238

Query:   375 KTRREIVALGVQLGKMNIAAWASKDEQGKNTSSAEKNSDMEELERIEYEKRASAWAEAEK 434
               R + +A   +  ++ I AW + +++       +     E ++    EK A+  A  ++
Sbjct:   239 AERAKFMAR-YKREEVKIQAWENHEKRKAEMEMKKMEVKAERMKARAEEKLANKLAATKR 297

 Score = 115 (45.5 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
 Identities = 25/79 (31%), Positives = 41/79 (51%)

Query:   127 MRMHEDDNLDYDSNAS---SSSFEFHKGERSMQNHMARSFSRPMPSKWNDAEKWIMNRQI 183
             MR   +DN  +   A+   S+ FEF KG     NH   +  +P PSKW+DA+KW+     
Sbjct:     1 MRSSVEDNKGWIGPATPEISNGFEFQKGSNRTPNHHRSTMGKPAPSKWDDAQKWLSGVGF 60

Query:   184 IQANYA--KKNALHNQANR 200
              +       K++ H+++N+
Sbjct:    61 ARGGGGGGDKSSHHSRSNK 79

 Score = 62 (26.9 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
 Identities = 15/39 (38%), Positives = 26/39 (66%)

Query:   405 TSSAEK-NSDMEELERIE-YEKRASAWAEAEKSKHIARF 441
             ++++EK N  +E  + +   E RA AW EAE++K +AR+
Sbjct:   210 SNNSEKVNGFVESKKAMSAMEARAMAWDEAERAKFMARY 248

 Score = 38 (18.4 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
 Identities = 7/23 (30%), Positives = 13/23 (56%)

Query:    29 NRKKDGSNSNSARTSPSRLDDSE 51
             NR  +   S   + +PS+ DD++
Sbjct:    30 NRTPNHHRSTMGKPAPSKWDDAQ 52


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.310   0.124   0.349    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      443       428   0.00085  118 3  11 23  0.48    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  617 (66 KB)
  Total size of DFA:  268 KB (2142 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  43.87u 0.10s 43.97t   Elapsed:  00:00:02
  Total cpu time:  43.87u 0.10s 43.97t   Elapsed:  00:00:02
  Start:  Fri May 10 18:09:23 2013   End:  Fri May 10 18:09:25 2013

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