Query 013425
Match_columns 443
No_of_seqs 213 out of 2396
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 10:20:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013425.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013425hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qfs_A CPR, P450R, NADPH--cyto 100.0 2.5E-85 8.6E-90 681.4 45.6 390 40-443 57-458 (458)
2 2qtl_A MSR;, methionine syntha 100.0 8.2E-82 2.8E-86 667.9 45.0 391 40-443 109-539 (539)
3 3qe2_A CPR, P450R, NADPH--cyto 100.0 1.4E-81 4.9E-86 677.4 45.8 389 42-443 219-618 (618)
4 4dql_A Bifunctional P-450/NADP 100.0 1E-81 3.5E-86 644.8 40.3 378 45-443 6-392 (393)
5 1f20_A Nitric-oxide synthase; 100.0 8.3E-78 2.8E-82 623.9 44.6 389 42-443 27-434 (435)
6 2bpo_A CPR, P450R, NADPH-cytoc 100.0 5.1E-78 1.7E-82 656.3 38.3 386 42-442 256-682 (682)
7 1ddg_A Sulfite reductase (NADP 100.0 4.4E-76 1.5E-80 599.9 42.4 364 40-442 6-374 (374)
8 1tll_A Nitric-oxide synthase, 100.0 1.1E-72 3.8E-77 614.6 41.2 387 44-443 250-655 (688)
9 1fnb_A Ferredoxin-NADP+ reduct 100.0 9.3E-40 3.2E-44 324.6 28.1 265 44-442 36-314 (314)
10 2bmw_A Ferredoxin--NADP reduct 100.0 2.2E-39 7.6E-44 320.2 30.2 267 43-442 19-304 (304)
11 3vo2_A Putative uncharacterize 100.0 7.9E-39 2.7E-43 317.6 31.1 272 37-442 25-310 (310)
12 2b5o_A FNR, ferredoxin--NADP r 100.0 7.1E-38 2.4E-42 321.6 29.4 265 45-442 122-402 (402)
13 2rc5_A Ferredoxin-NADP reducta 100.0 5.5E-37 1.9E-41 304.5 28.3 211 218-442 91-314 (314)
14 3lo8_A Ferredoxin--NADP reduct 100.0 6.9E-37 2.4E-41 303.4 18.7 224 206-442 62-311 (311)
15 3jqq_A Ferredoxin NADP reducta 100.0 1.8E-35 6.1E-40 294.4 27.4 291 36-442 6-316 (316)
16 1tvc_A Methane monooxygenase c 100.0 5.4E-28 1.9E-32 231.9 15.1 180 206-411 45-231 (250)
17 2r6h_A NADH:ubiquinone oxidore 99.9 1E-27 3.4E-32 234.7 13.7 181 218-412 84-277 (290)
18 1qfj_A Protein (flavin reducta 99.9 1.4E-27 4.7E-32 226.3 12.6 176 206-409 31-213 (232)
19 1fdr_A Flavodoxin reductase; f 99.9 1.4E-27 4.8E-32 228.4 11.2 184 206-412 32-229 (248)
20 1krh_A Benzoate 1,2-dioxygenas 99.9 4.3E-27 1.5E-31 235.6 13.9 178 206-412 140-323 (338)
21 2eix_A NADH-cytochrome B5 redu 99.9 1.5E-27 5E-32 227.6 9.6 180 206-412 43-233 (243)
22 1umk_A B5R, NADH-cytochrome B5 99.9 1E-27 3.5E-32 233.0 8.0 192 206-412 48-265 (275)
23 4eh1_A Flavohemoprotein; struc 99.9 5.9E-27 2E-31 223.2 11.7 180 206-412 35-223 (243)
24 4fk8_A Ferredoxin--NADP reduct 99.9 1E-27 3.4E-32 232.7 3.4 201 206-442 48-268 (271)
25 2bgi_A Ferredoxin-NADP(H) redu 99.9 1.2E-26 4.2E-31 225.5 8.7 183 206-411 45-247 (272)
26 2qdx_A Ferredoxin reductase; o 99.9 8.9E-27 3E-31 224.3 7.3 183 206-411 32-233 (257)
27 1gvh_A Flavohemoprotein; oxido 99.9 4.9E-26 1.7E-30 232.7 13.1 178 205-411 183-377 (396)
28 4g1v_A Flavohemoglobin; three 99.9 9.6E-26 3.3E-30 230.9 14.8 181 206-412 185-378 (399)
29 2cnd_A NADH-dependent nitrate 99.9 2.1E-26 7.3E-31 222.9 7.4 192 206-411 44-258 (270)
30 1ep3_B Dihydroorotate dehydrog 99.9 9.6E-26 3.3E-30 218.0 10.8 169 206-411 35-211 (262)
31 1cqx_A Flavohemoprotein; globi 99.9 2.4E-25 8.1E-30 228.1 11.7 181 206-411 186-383 (403)
32 2pia_A Phthalate dioxygenase r 99.9 8.8E-25 3E-29 217.6 9.1 172 206-411 40-214 (321)
33 2gpj_A Siderophore-interacting 99.8 3.3E-20 1.1E-24 178.4 5.5 166 205-410 39-211 (252)
34 3lrx_A Putative hydrogenase; a 99.8 9E-19 3.1E-23 156.8 8.1 126 264-412 1-135 (158)
35 3lyu_A Putative hydrogenase; t 99.7 1.8E-17 6E-22 145.8 8.7 120 272-412 3-130 (142)
36 3a1f_A Cytochrome B-245 heavy 99.7 4.3E-18 1.5E-22 154.7 4.5 134 273-413 2-170 (186)
37 3lo8_A Ferredoxin--NADP reduct 82.4 4.1 0.00014 38.9 8.6 62 26-90 11-73 (311)
38 2r6h_A NADH:ubiquinone oxidore 50.7 23 0.0008 32.9 6.1 44 42-90 6-51 (290)
39 3s2u_A UDP-N-acetylglucosamine 47.0 16 0.00056 35.5 4.4 27 287-313 2-30 (365)
40 1w78_A FOLC bifunctional prote 44.3 2.1E+02 0.0072 28.0 12.3 107 289-411 297-416 (422)
41 3nrs_A Dihydrofolate:folylpoly 42.0 1.7E+02 0.0057 29.1 11.2 106 288-409 311-435 (437)
42 2pia_A Phthalate dioxygenase r 34.1 66 0.0023 30.5 6.4 38 48-90 12-51 (321)
43 2eix_A NADH-cytochrome B5 redu 31.2 75 0.0026 28.4 6.0 42 43-89 8-53 (243)
44 1tvc_A Methane monooxygenase c 30.8 41 0.0014 30.5 4.1 43 43-90 8-56 (250)
45 4eh1_A Flavohemoprotein; struc 30.4 91 0.0031 27.7 6.5 38 48-90 7-46 (243)
46 1ep3_B Dihydroorotate dehydrog 29.7 56 0.0019 29.8 4.9 39 48-91 9-47 (262)
47 1qfj_A Protein (flavin reducta 29.4 72 0.0025 28.2 5.5 37 48-90 6-42 (232)
48 1krh_A Benzoate 1,2-dioxygenas 29.2 82 0.0028 29.9 6.2 42 44-90 107-151 (338)
49 2lnb_A Z-DNA-binding protein 1 27.5 1.3E+02 0.0043 22.9 5.4 26 415-440 42-67 (80)
50 1umk_A B5R, NADH-cytochrome B5 27.3 95 0.0032 28.3 6.1 37 48-89 20-58 (275)
51 2bgi_A Ferredoxin-NADP(H) redu 24.7 89 0.003 28.6 5.3 37 48-90 20-56 (272)
52 2cnd_A NADH-dependent nitrate 23.9 1.1E+02 0.0037 27.8 5.7 37 48-89 16-54 (270)
53 2qdx_A Ferredoxin reductase; o 23.8 96 0.0033 28.0 5.3 37 48-90 7-43 (257)
54 4fk8_A Ferredoxin--NADP reduct 23.1 87 0.003 28.5 4.9 36 48-89 23-58 (271)
55 1fdr_A Flavodoxin reductase; f 21.3 1.4E+02 0.0046 26.7 5.8 36 48-90 8-43 (248)
56 1gvh_A Flavohemoprotein; oxido 20.9 1.3E+02 0.0043 29.2 5.9 37 48-89 156-194 (396)
No 1
>3qfs_A CPR, P450R, NADPH--cytochrome P450 reductase; flavoprotein, FAD, oxidoreductase; HET: FAD NAP; 1.40A {Homo sapiens} PDB: 3qft_A*
Probab=100.00 E-value=2.5e-85 Score=681.43 Aligned_cols=390 Identities=33% Similarity=0.629 Sum_probs=356.4
Q ss_pred cccCccce-eEEEeeeecCCCCCCcEEEEEEEecCCCcccCCCCEEEEccCCCHHHHHHHHHHcCCCCCceEEEeeCCcc
Q 013425 40 NNKAVCFL-KMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEMK 118 (443)
Q Consensus 40 ~~~~~~~~-~v~~~~~Lt~~~~~~~v~~i~l~~~~~~~~y~~GD~l~I~p~N~~~~V~~~l~~l~l~~~~~v~i~~~~~~ 118 (443)
.++.++|. +|++|++||+ +++++|+||+||+++++++|+|||+|+|||.|+++.|+++|++||+++++.|++......
T Consensus 57 ~~~~~p~~a~v~~n~~Lt~-~~~r~~~hie~dl~~s~l~Y~~GD~l~V~p~N~~~~V~~~l~~l~~~~d~~v~~~~~~~~ 135 (458)
T 3qfs_A 57 FDAKNPFLAAVTTNRKLNQ-GTERHLMHLELDISDSKIRYESGDHVAVYPANDSALVNQLGKILGADLDVVMSLNNLDEE 135 (458)
T ss_dssp CCSSSCEEEEEEEEEECCS-SSSSCEEEEEEECTTSCCCCCTTCEEEECCCCCHHHHHHHHHHHTCCTTCEEEEEESSTT
T ss_pred CCCCCCEEEEEEEEEEcCC-CCCCCEEEEEEEeCCCCcccCCCCEEEEEeeCCHHHHHHHHHHhCcCCCceEEecCCCcc
Confidence 34566788 9999999998 468999999999998899999999999999999999999999999999999999764432
Q ss_pred CCCCccccCCCCCcchHHHHHHHccccCCCCCCHHHHHHHHHhccChhHHHHHHhhcCC--CChHHHHHHHHhcCCCHHH
Q 013425 119 NYLPDIHKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASP--EGRDDLYKYNQKERRTVLE 196 (443)
Q Consensus 119 ~~~~~~~~~~~~~~~tl~~ll~~~~Dl~~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~--~~~~~~~~~~~~~~~~l~d 196 (443)
... +.+++.++|++++|++|+||++ +|+++||+.||.||+|+.+|++|+.|++. +|+++|.+|+.+++++++|
T Consensus 136 ~~~----~~p~~~~~tl~~~l~~~~di~~-~p~~~~l~~la~~a~~~~ek~~L~~l~~~~~~~~~~~~~~~~~~~~~ild 210 (458)
T 3qfs_A 136 SNK----KHPFPCPTSYRTALTYYLDITN-PPRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVVEARRHILA 210 (458)
T ss_dssp CSC----CCSSSSSEEHHHHHHHTBCCSS-CCCHHHHHHHGGGBCSHHHHHHHHHHHSCSHHHHHHHHHHTTTTTCCHHH
T ss_pred ccc----CCCCCCCeeHHHHHHhcEeccC-CCCHHHHHHHHHHcCCHHHHHHHHHHhccCcccHHHHHHHHhhcCCCHHH
Confidence 222 2356889999999999999999 99999999999999999999999999984 6789999999999999999
Q ss_pred HHhhCCCCCCCHHHHHHhcCCCCcceeecCCCCCCCCCeEEEEEEEEEecCCCCcccCCcccccccCCCCCCCc------
Q 013425 197 VLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGI------ 270 (443)
Q Consensus 197 ~L~~f~s~~~p~~~ll~~lp~~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~~~G~------ 270 (443)
+|.+||++++|+++|++.+|+++||+|||||+|..+++.++|+|++|+|++..++.+.|+||+||+++.+ |+
T Consensus 211 vL~~fps~~~p~~~ll~~lp~l~pR~YSIsSsp~~~~~~i~ltV~vv~~~~~~~r~~~G~~S~~L~~l~~--gg~~~~~~ 288 (458)
T 3qfs_A 211 ILQDCPSLRPPIDHLCELLPRLQARYYSIASSSKVHPNSVHICAVVVEYETKAGRINKGVATNWLRAKEP--VGENGGRA 288 (458)
T ss_dssp HHHHSTTBCCCHHHHHHHSCBCCCEEEECCSCTTTCTTEEEEEEECCEEECTTSCEEECHHHHHHHTCCS--SCSSCCCC
T ss_pred HHHhCCccCCCHHHHHhhCCCCcceeEeeccCcccCCCEEEEEEEEEEecCCCCCCCCCchhHHHHhhcc--CCccCCce
Confidence 9999999999999999999999999999999998778999999999999998888999999999998876 54
Q ss_pred EEEEEeecCCCCCC-CCCCCeEEEeCCccchhHHHHHHHHHHhcCCC-CCCCEEEEEeecCC-ccccCHHHHHHhhhcCC
Q 013425 271 YIPAWFQKGSLPRP-PPSVPLILIGPGTGCAPFRGFVEERAIQSSSG-PAAPIIFFFGCRNE-DDFLYRELWLSHSLNDG 347 (443)
Q Consensus 271 ~v~i~~~~g~F~lp-~~~~piImIa~GTGIAPfrs~lq~~~~~~~~~-~~~~~~L~~G~R~~-~d~ly~~el~~~~~~~g 347 (443)
.|.+.+|.|.|++| ++.+|+||||+|||||||+||++++......+ ..++++||||||++ .|++|++||++|.+. |
T Consensus 289 ~v~v~~p~g~F~lp~~~~~piImIggGTGIAPfrs~lq~r~~l~~~g~~~~~~~Lf~G~R~~~~D~ly~dEl~~l~~~-g 367 (458)
T 3qfs_A 289 LVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPFIGFIQERAWLRQQGKEVGETLLYYGCRRSDEDYLYREELAQFHRD-G 367 (458)
T ss_dssp EEEEEEECCSCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHHHTCCCCCEEEEEEESCTTTSCTTHHHHHHHHHH-T
T ss_pred EEEEEecCCCcccCCCCCCceEEEcCCcchhhHHHHHHHHHHHHhcCCCCCCEEEEEEeCCchHhhhHHHHHHHHHHc-C
Confidence 69999999999999 77899999999999999999999986422111 23789999999997 499999999999988 6
Q ss_pred CccccCCCeEEEEEccCCCCcccchhhHHHcHHHHHHhhcCCCEEEEeCCCCchHHHHHHHHHHHHHHhCCCCHHHHHHH
Q 013425 348 VFSEAKGGGFYVAFSRKQPQKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANW 427 (443)
Q Consensus 348 ~l~~~~~~~~~~a~Sr~~~~k~yVqd~l~~~~~~l~~~l~~~~~iyvCG~~~~M~~~V~~~L~~i~~~~~~~~~~~a~~~ 427 (443)
.++ ++++||||+++.++||||.|+++.+.+|+++.++++||||||++.|+++|.++|.+|++++++++.++|++|
T Consensus 368 ~l~-----~l~~a~SRd~~~k~yVqd~l~~~~~~l~~~l~~~~~vYvCGp~~~M~~~V~~~L~~i~~~~g~~~~~~A~~~ 442 (458)
T 3qfs_A 368 ALT-----QLNVAFSREQSHKVYVQHLLKQDREHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEHAQAVDY 442 (458)
T ss_dssp SSS-----EEEEEETTSSSSCCCHHHHHHHTHHHHHHHHHTTCEEEEEEETTTHHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred CCC-----EEEEEEECCCCCcccHhHHHHHhHHHHHHHhcCCCEEEEECCCHHHHHHHHHHHHHHHHHcCCCCHHHHHHH
Confidence 665 899999999988999999999999999999988999999999768999999999999999999999999999
Q ss_pred HHHHHHcCCEEEeecC
Q 013425 428 LKALQRAGRYHVEAWS 443 (443)
Q Consensus 428 l~~l~~~~Ry~~dvWs 443 (443)
+++|+++|||++||||
T Consensus 443 ~~~l~~~~RY~~Dvws 458 (458)
T 3qfs_A 443 IKKLMTKGRYSLDVWS 458 (458)
T ss_dssp HHHHHHTTSEEEEEEC
T ss_pred HHHHHHCCCeEEEecC
Confidence 9999999999999998
No 2
>2qtl_A MSR;, methionine synthase reductase; alpha-beta-alpha structural motif, flattened antiparallel BE barrel, flexible hinge region, connecting domain; HET: FAD; 1.90A {Homo sapiens} PDB: 2qtz_A*
Probab=100.00 E-value=8.2e-82 Score=667.91 Aligned_cols=391 Identities=28% Similarity=0.519 Sum_probs=346.4
Q ss_pred cccCccce-eEEEeeeecCCCCCCcEEEEEEEecCCCcccCCCCEEEEccCCCHHHHHHHHHHcCCCCC--ceEEEeeCC
Q 013425 40 NNKAVCFL-KMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQRCNLDPD--ALITVQHKE 116 (443)
Q Consensus 40 ~~~~~~~~-~v~~~~~Lt~~~~~~~v~~i~l~~~~~~~~y~~GD~l~I~p~N~~~~V~~~l~~l~l~~~--~~v~i~~~~ 116 (443)
.+..++|. +|++|++||+.+++++|+||+||+++++++|+|||+|+|+|.|+++.|+++|++||++++ +.|++.+..
T Consensus 109 ~~~~~~~~a~v~~~~~Lt~~~~~r~v~hield~~~~~l~Y~~GD~l~V~P~N~~~~V~~~l~~lgl~~~~~~~v~~~~~~ 188 (539)
T 2qtl_A 109 TSADPVFQVPISKAVQLTTNDAIKTTLLVELDISNTDFSYQPGDAFSVICPNSDSEVQSLLQRLQLEDKREHCVLLKIKA 188 (539)
T ss_dssp ----CCEEEEEEEEEECSCTTCSSCEEEEEEECTTSCCCCCTTCEEEEECCCCHHHHHHHHHHTTCGGGTTSEEEEEECT
T ss_pred CCCCCCEEEEEEeeEEcCCCCCCCcEEEEEEecCCCCcCcCCCCEEEEEeCCCHHHHHHHHHHhCCCccCCeEEEEeccc
Confidence 44566777 999999999999999999999999988899999999999999999999999999999864 677776543
Q ss_pred cc----CCCCccccCCCCCcchHHHHHHHccccCCCCCCHHHHHHHHHhccChhHHHHHHhhcCCCChHHHHHHHHhcCC
Q 013425 117 MK----NYLPDIHKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERR 192 (443)
Q Consensus 117 ~~----~~~~~~~~~~~~~~~tl~~ll~~~~Dl~~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~~ 192 (443)
.. ..+ ..++|.++|++++|++|+||++ +|++.||+.||.||+|+.+|++|+.|++++|.++|++|+.++++
T Consensus 189 ~~~~~~~~~----p~~~p~~~tl~~~L~~~lDi~~-~p~~~~l~~la~~a~d~~ek~~L~~l~s~~~~~~~~~~~~~~~~ 263 (539)
T 2qtl_A 189 DTKKKGATL----PQHIPAGCSLQFIFTWCLEIRA-IPKKAFLRALVDYTSDSAEKRRLQELCSKQGAADYSRFVRDACA 263 (539)
T ss_dssp TCCCTTCCC----CTTSCTTCBHHHHHHHTBCTTS-CCCHHHHHHHHTTBCSHHHHHHHHHHHSSTTHHHHHHHTTTTTC
T ss_pred cccCCCccC----CCCCCCcccHHHHHHHHhhhcC-CCCHHHHHHHHHHcCCHHHHHHHHHHhChhhHHHHHHHHhhcCC
Confidence 21 112 2356889999999999999999 99999999999999999999999999999999999999999999
Q ss_pred CHHHHHhhCCCCCCCHHHHHHhcCCCCcceeecCCCCCCCCCeEEEEEEEEEecC--CCCcccCCcccccccCC------
Q 013425 193 TVLEVLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTT--PYKRKRTGLCSVWLAGL------ 264 (443)
Q Consensus 193 ~l~d~L~~f~s~~~p~~~ll~~lp~~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~--~~~~~~~G~~S~~L~~l------ 264 (443)
+++|+|.+||++++|+++|+..+|++++|+|||||+|..+++.++|+|++++|++ ..++.+.|+||+||+++
T Consensus 264 ~lldvL~~fps~~~p~~~ll~~lp~l~~R~YSIsSsp~~~~~~i~ltV~~v~~~~~~~~~~~~~G~~S~~L~~l~~~~~~ 343 (539)
T 2qtl_A 264 CLLDLLLAFPSCQPPLSLLLEHLPKLQPRPYSCASSSLFHPGKLHFVFNIVEFLSTATTEVLRKGVCTGWLALLVASVLQ 343 (539)
T ss_dssp CHHHHHHHSTTBCCCHHHHHHHSCBCCCEEEECCSCTTTSTTEEEEEEECCEEECSCSSCSEEECHHHHHHHHHTTTTC-
T ss_pred CHHHHHHhCCCcCCCHHHHHHhCcCCcceEEeecCCccCCCCEEEEEEEEEEeccCCCCCcCCCCchhhHHHHhhhhhcc
Confidence 9999999999999999999999999999999999999766899999999999954 34456789999999986
Q ss_pred -----CCCCCc-------EEEEEeecC-CCCCC-CCCCCeEEEeCCccchhHHHHHHHHHHhcCC---CCCCCEEEEEee
Q 013425 265 -----DPQQGI-------YIPAWFQKG-SLPRP-PPSVPLILIGPGTGCAPFRGFVEERAIQSSS---GPAAPIIFFFGC 327 (443)
Q Consensus 265 -----~~~~G~-------~v~i~~~~g-~F~lp-~~~~piImIa~GTGIAPfrs~lq~~~~~~~~---~~~~~~~L~~G~ 327 (443)
++ |+ .|.|++|.| .|++| ++.+|+||||+||||||||||++++...... ...++++|||||
T Consensus 344 ~~~~~~~--Gd~~~~~~~~V~v~~p~g~~F~Lp~~~~~piImIg~GTGIAPfrsflq~r~~~~~~~~~~~~~~v~LffG~ 421 (539)
T 2qtl_A 344 PNIHASH--EDSGKALAPKISIFPRTTNSFHLPDDPSIPIIMVGPGTGIAPFIGFLQHREKLQEQHPDGNFGAMWLFFGC 421 (539)
T ss_dssp ---------------CCCEEEEEECSCCCCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHHHCTTCCCCCEEEEEEE
T ss_pred ccccCCC--CCccccCceEEEEEeeeCCCccCCccCCCCEEEEEcCccHHHHHHHHHHHHHHHhccccCCCCCEEEEEEE
Confidence 88 99 999999976 99999 7789999999999999999999998654211 123899999999
Q ss_pred cCCc-cccCHHHHHHhhhcCCCccccCCCeEEEEEccCCC------CcccchhhHHHcHHHHHHhh-cCCCEEEEeCCCC
Q 013425 328 RNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQP------QKVYVQHKMLEQSQRIWNLL-LSKASIYVAGSAT 399 (443)
Q Consensus 328 R~~~-d~ly~~el~~~~~~~g~l~~~~~~~~~~a~Sr~~~------~k~yVqd~l~~~~~~l~~~l-~~~~~iyvCG~~~ 399 (443)
|+++ |++|++||++|.+. |.+. ++++||||++. .++||||.|+++.+.+|+++ ..+++|||||+++
T Consensus 422 R~~~~D~ly~dEL~~~~~~-g~~~-----~l~~afSRd~~~~~~~g~k~yVqd~l~e~~~~l~~~l~~~~a~vYVCGp~~ 495 (539)
T 2qtl_A 422 RHKDRDYLFRKELRHFLKH-GILT-----HLKVSFSRDAPVGEEEAPAKYVQDNIQLHGQQVARILLQENGHIYVCGDAK 495 (539)
T ss_dssp SCTTTCCTTHHHHHHHHHT-TSSC-----EEEEEESSSCC------CCCSHHHHHHHTHHHHHHHHHHSCCEEEEEESCH
T ss_pred CCcchhhHHHHHHHHHHHh-CCCc-----EEEEEEccCCCccccCCCccchhHHHHHhHHHHHHhhccCCcEEEEECCCH
Confidence 9995 99999999999987 5444 99999999976 69999999999999999998 4589999999976
Q ss_pred chHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCEEEeecC
Q 013425 400 KMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAWS 443 (443)
Q Consensus 400 ~M~~~V~~~L~~i~~~~~~~~~~~a~~~l~~l~~~~Ry~~dvWs 443 (443)
.|+++|.++|.+|++++++++.++|++|+++|+++|||++||||
T Consensus 496 ~M~~~V~~~L~~i~~~~~~~~~~~A~~~l~~l~~~~RY~~Dvw~ 539 (539)
T 2qtl_A 496 NMAKDVHDALVQIISKEVGVEKLEAMKTLATLKEEKRYLQDIWS 539 (539)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEC-
T ss_pred HHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCcEEEEcCC
Confidence 89999999999999999999999999999999999999999997
No 3
>3qe2_A CPR, P450R, NADPH--cytochrome P450 reductase; cypor, antley-bixler syndrome, flavoprotein, FMN, FAD, oxidoreductase; HET: FAD FMN NAP; 1.75A {Homo sapiens} PDB: 3qfc_A* 3qfr_A* 1amo_A* 1j9z_A* 1ja0_A* 1ja1_A* 3es9_A* 3ojw_A* 3ojx_A* 3fjo_A* 1b1c_A*
Probab=100.00 E-value=1.4e-81 Score=677.44 Aligned_cols=389 Identities=34% Similarity=0.641 Sum_probs=356.4
Q ss_pred cCccce-eEEEeeeecCCCCCCcEEEEEEEecCCCcccCCCCEEEEccCCCHHHHHHHHHHcCCCCCceEEEeeCCccCC
Q 013425 42 KAVCFL-KMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEMKNY 120 (443)
Q Consensus 42 ~~~~~~-~v~~~~~Lt~~~~~~~v~~i~l~~~~~~~~y~~GD~l~I~p~N~~~~V~~~l~~l~l~~~~~v~i~~~~~~~~ 120 (443)
..++|. +|++|++||+ ++.++|+||+|++++++++|+|||+|+|+|.|+++.|+++|++||+++++.|++........
T Consensus 219 ~~~~~~a~v~~n~~Lt~-~~~~~~~hie~~~~~~~~~Y~~GD~l~V~p~N~~~~V~~~l~~l~l~~d~~v~~~~~~~~~~ 297 (618)
T 3qe2_A 219 AKNPFLAAVTTNRKLNQ-GTERHLMHLELDISDSKIRYESGDHVAVYPANDSALVNQLGKILGADLDVVMSLNNLDEESN 297 (618)
T ss_dssp SSSCEEEEEEEEEECSC-CSSSCEEEEEEECTTSCCCCCTTCEEEECCCCCHHHHHHHHHHTTCCTTCEEEEEESCTTCS
T ss_pred cCCcEEEEEEeEEEcCC-CCCCcEEEEEEEcCCCCcccccCCEEEEEcCCCHHHHHHHHHHhCcCCCceEEEecCCcccc
Confidence 345677 9999999996 46799999999999889999999999999999999999999999999999999976543222
Q ss_pred CCccccCCCCCcchHHHHHHHccccCCCCCCHHHHHHHHHhccChhHHHHHHhhc--CCCChHHHHHHHHhcCCCHHHHH
Q 013425 121 LPDIHKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFA--SPEGRDDLYKYNQKERRTVLEVL 198 (443)
Q Consensus 121 ~~~~~~~~~~~~~tl~~ll~~~~Dl~~~~p~~~~l~~la~~~~~~~~k~~L~~l~--~~~~~~~~~~~~~~~~~~l~d~L 198 (443)
. +.++|.|+|++++|++|+||++ +|+++||+.||.||+|+.+|++|+.|+ +++|+++|++|+.+++++++|+|
T Consensus 298 ~----~~~~p~~~tl~~~l~~~~di~~-~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~~~~~i~dvL 372 (618)
T 3qe2_A 298 K----KHPFPCPTSYRTALTYYLDITN-PPRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVVEARRHILAIL 372 (618)
T ss_dssp C----CSSSSSSEEHHHHHHHTBCCSS-CCCHHHHHHHGGGBCSHHHHHHHHHTTCSSSHHHHHHHHHTTTTTCCHHHHH
T ss_pred C----CCCCCCceEHHHhhhhEeecCC-CCcHHHHHHHHHHcCCHHHHHHHHHhhccChhhHHHHHHHHhhcCCCHHHHH
Confidence 2 2346899999999999999999 999999999999999999999999999 67889999999999999999999
Q ss_pred hhCCCCCCCHHHHHHhcCCCCcceeecCCCCCCCCCeEEEEEEEEEecCCCCcccCCcccccccCCCCCCCc-----EEE
Q 013425 199 EDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGI-----YIP 273 (443)
Q Consensus 199 ~~f~s~~~p~~~ll~~lp~~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~~~G~-----~v~ 273 (443)
.+||++++|+++|++.+|+++||+|||||+|..+++.++|+|++|+|++..++.+.|+||+||+++.+. |+ .|.
T Consensus 373 ~~fps~~~p~~~l~~~lp~l~pR~YSIsSsp~~~~~~i~ltv~vv~~~~~~~~~~~G~~S~~L~~l~~~-Gd~~~~~~v~ 451 (618)
T 3qe2_A 373 QDCPSLRPPIDHLCELLPRLQARYYSIASSSKVHPNSVHICAVVVEYETKAGRINKGVATNWLRAKEPV-GENGGRALVP 451 (618)
T ss_dssp HHSTTBCCCHHHHHHHSCBCCCEEEECCSCTTTCTTEEEEEEECCEEECTTSCEEECHHHHHHHTCCCC------CCEEE
T ss_pred HhCCccCCCHHHHHHhccccccceeccccCCcCCCCEEEEEEEEEEEecCCCCCCCCcccHHHHhhccc-CCCCcceEEE
Confidence 999999999999999999999999999999988889999999999999988888999999999987541 66 999
Q ss_pred EEeecCCCCCC-CCCCCeEEEeCCccchhHHHHHHHHHHhcCCC-CCCCEEEEEeecCCc-cccCHHHHHHhhhcCCCcc
Q 013425 274 AWFQKGSLPRP-PPSVPLILIGPGTGCAPFRGFVEERAIQSSSG-PAAPIIFFFGCRNED-DFLYRELWLSHSLNDGVFS 350 (443)
Q Consensus 274 i~~~~g~F~lp-~~~~piImIa~GTGIAPfrs~lq~~~~~~~~~-~~~~~~L~~G~R~~~-d~ly~~el~~~~~~~g~l~ 350 (443)
+++|.|.|++| ++.+|+||||+||||||||||++++......+ ..++++||||||+++ |++|++||++|.+. |.++
T Consensus 452 v~~p~g~F~lp~~~~~piimIg~GtGIAPfrs~l~~r~~~~~~g~~~~~~~L~~G~R~~~~D~ly~~el~~~~~~-g~l~ 530 (618)
T 3qe2_A 452 MFVRKSQFRLPFKATTPVIMVGPGTGVAPFIGFIQERAWLRQQGKEVGETLLYYGCRRSDEDYLYREELAQFHRD-GALT 530 (618)
T ss_dssp EEEECCSCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHHTTCCCCCEEEEEEESCTTTSCTTHHHHHHHHHH-TSSS
T ss_pred EEEecCcccCCCCCCCCeEEEcCCcchhhHHHHHHHHHHHHhcCCCCCCEEEEEecCCCccccchHHHHHHHHhc-CCCc
Confidence 99999999999 77899999999999999999999998643222 237899999999996 99999999999998 7776
Q ss_pred ccCCCeEEEEEccCCCCcccchhhHHHcHHHHHHhhcCCCEEEEeCCCCchHHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 013425 351 EAKGGGFYVAFSRKQPQKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKA 430 (443)
Q Consensus 351 ~~~~~~~~~a~Sr~~~~k~yVqd~l~~~~~~l~~~l~~~~~iyvCG~~~~M~~~V~~~L~~i~~~~~~~~~~~a~~~l~~ 430 (443)
++++||||++++++||||+|+++.+.+++++.++++||||||++.|+++|.++|.+|++++++++.++|++|+++
T Consensus 531 -----~l~~a~Srd~~~k~yVqd~l~~~~~~l~~~l~~~a~vYvCGp~~~M~~~V~~~L~~i~~~~g~~~~~~a~~~~~~ 605 (618)
T 3qe2_A 531 -----QLNVAFSREQSHKVYVQHLLKQDREHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEHAQAVDYIKK 605 (618)
T ss_dssp -----EEEEEETTSSSSCCCHHHHHHHTHHHHHHHHHHTCEEEEEEETTTHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred -----EEEEEEcCCCCCCCcHHHHHHHhHHHHHHHHhCCcEEEEECCchHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 899999999988999999999999999999977999999999779999999999999999999999999999999
Q ss_pred HHHcCCEEEeecC
Q 013425 431 LQRAGRYHVEAWS 443 (443)
Q Consensus 431 l~~~~Ry~~dvWs 443 (443)
|+++|||++||||
T Consensus 606 l~~~~RY~~Dv~s 618 (618)
T 3qe2_A 606 LMTKGRYSLDVWS 618 (618)
T ss_dssp HHHTTSEEEEEEC
T ss_pred HHHcCCeEEeecC
Confidence 9999999999998
No 4
>4dql_A Bifunctional P-450/NADPH-P450 reductase; rossmann fold, redox, FAD and NADP+ binding, oxidoreductase; HET: FAD NAP 1PE PG4; 2.15A {Bacillus megaterium} PDB: 4dqk_A*
Probab=100.00 E-value=1e-81 Score=644.82 Aligned_cols=378 Identities=29% Similarity=0.506 Sum_probs=339.7
Q ss_pred cce-eEEEeeeecCCCCCCcEEEEEEEecCCCcccCCCCEEEEccCCCHHHHHHHHHHcCCCCCceEEEeeCCcc-CCCC
Q 013425 45 CFL-KMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEMK-NYLP 122 (443)
Q Consensus 45 ~~~-~v~~~~~Lt~~~~~~~v~~i~l~~~~~~~~y~~GD~l~I~p~N~~~~V~~~l~~l~l~~~~~v~i~~~~~~-~~~~ 122 (443)
.|. +|++|++||+++++++|+||+||++ ++++|+|||+|+|+|.|+++.|+++|++||+++++.|++...... ..+
T Consensus 6 ~~~a~v~~n~~Lt~~~~~~~~~hie~~l~-~~~~Y~~GD~l~v~p~N~~~~V~~~l~~l~l~~~~~v~~~~~~~~~~~~- 83 (393)
T 4dql_A 6 AFSTNVVASKELQQPGSARSTRHLEIELP-KEASYQEGDHLGVIPRNYEGIVNRVTARFGLDASQQIRLEAEEEKLAHL- 83 (393)
T ss_dssp CEEEEEEEEEECSCTTCSCCEEEEEEECC-TTCCCCTTCEEEECCCCCHHHHHHHHHHHTCCTTCEECCCC---------
T ss_pred cEEEEEEeEEEcCCCCCCceEEEEEEECC-CCCccCCCCEEEEEccCCHHHHHHHHHHhCcCCCCeEEEeCCCCccccC-
Confidence 455 9999999999999999999999998 689999999999999999999999999999999998877542211 122
Q ss_pred ccccCCCCCcchHHHHHHHccccCCCCCCHHHHHHHHHhccChhHHHHHHhhcCCCChHHHHHHHHhcCCCHHHHHhhCC
Q 013425 123 DIHKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTVLEVLEDFP 202 (443)
Q Consensus 123 ~~~~~~~~~~~tl~~ll~~~~Dl~~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~~~l~d~L~~f~ 202 (443)
+++.|+|++++|++ +||++ +|+++||+.||.||+|+.+|++|+.|++. +.|.+|+.+++++++|+|.+||
T Consensus 84 -----p~~~~~tl~~~l~~-~di~~-~~~~~~l~~la~~~~~~~~~~~L~~l~~~---~~~~~~~~~~~~~~ldvL~~fp 153 (393)
T 4dql_A 84 -----PLAKTVSVEELLQY-VELQD-PVTRTQLRAMAAKTVCPPHKVELEALLEK---QAYKEQVLAKRLTMLELLEKYP 153 (393)
T ss_dssp --------CCEEHHHHTTS-BCSSS-BCCHHHHHHHHHTCCSHHHHHHHHHTTSH---HHHHHHTTTTTCBHHHHHHHCT
T ss_pred -----CCCCcEEHHHHHHh-ccccC-CCCHHHHHHHHHhCCCHHHHHHHHHHhCc---hHHHHHHhccCCCHHHHHHhCC
Confidence 35789999999999 99999 99999999999999999999999999873 3799999999999999999999
Q ss_pred CCCCCHHHHHHhcCCCCcceeecCCCCCCCCCeEEEEEEEEEecCCCCc-ccCCcccccccCCCCCCCcEEEE--EeecC
Q 013425 203 SVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKR-KRTGLCSVWLAGLDPQQGIYIPA--WFQKG 279 (443)
Q Consensus 203 s~~~p~~~ll~~lp~~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~-~~~G~~S~~L~~l~~~~G~~v~i--~~~~g 279 (443)
++++|+++|+..+|+++||+|||||+|..+++.++|+|+++.+++..++ .+.|+||+||+++++ |+.|.+ .+|.|
T Consensus 154 s~~~p~~~~l~~lp~l~~R~YSIsSsp~~~~~~i~l~v~vv~~~~~~g~~~~~G~~S~~L~~l~~--Gd~v~v~v~~P~g 231 (393)
T 4dql_A 154 ACEMKFSEFIALLPSIRPRYYSISSSPRVDEKQASITVSVVSGEAWSGYGEYKGIASNYLAELQE--GDTITCFISTPQS 231 (393)
T ss_dssp TCCCCHHHHHHTSCBCCCEEEECCSCTTTCTTEEEEEEECCEEECTTSSSEEECHHHHHHHHCCT--TCEEEEEEECCSS
T ss_pred CCCCCHHHHHHhCCCCcceeeeccccccccCceEEEEEEEEecccCCCCcccCCccchhHHhCCC--cCEEEEEEEcCCC
Confidence 9999999999999999999999999998778999999999999875543 457999999999999 999995 45779
Q ss_pred CCCCC-CCCCCeEEEeCCccchhHHHHHHHHHHhcCCC-CCCCEEEEEeecCC-ccccCHHHHHHhhhcCCCccccCCCe
Q 013425 280 SLPRP-PPSVPLILIGPGTGCAPFRGFVEERAIQSSSG-PAAPIIFFFGCRNE-DDFLYRELWLSHSLNDGVFSEAKGGG 356 (443)
Q Consensus 280 ~F~lp-~~~~piImIa~GTGIAPfrs~lq~~~~~~~~~-~~~~~~L~~G~R~~-~d~ly~~el~~~~~~~g~l~~~~~~~ 356 (443)
.|++| ++.+|+||||+|||||||+||++++......+ ..++++||||||++ .|++|++||+++.+. |.+ +
T Consensus 232 ~F~lp~~~~~piImIg~GtGIAPf~s~l~~r~~~~~~g~~~~~v~L~~G~R~~~~d~ly~~el~~~~~~-~~l------~ 304 (393)
T 4dql_A 232 EFTLPKDPETPLIMVGPGTGVAPFRGFVQARKQLKEQGQSLGEAHLYFGCRSPHEDYLYQEELENAQSE-GII------T 304 (393)
T ss_dssp CCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHHTTCCCCCEEEEEEESCTTTCCTTHHHHHHHHHT-TSC------E
T ss_pred CcccCccCCCCeEEEccCceechHHHHHHHHHHHHhcCCCCCCEEEEEEECCcchhhHHHHHHHHHHhC-CCe------E
Confidence 99999 77899999999999999999999986543222 23789999999996 599999999999987 999 9
Q ss_pred EEEEEcc-CCCCcccchhhHHHcHHHHHHhhcCCCEEEEeCCCCchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Q 013425 357 FYVAFSR-KQPQKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAG 435 (443)
Q Consensus 357 ~~~a~Sr-~~~~k~yVqd~l~~~~~~l~~~l~~~~~iyvCG~~~~M~~~V~~~L~~i~~~~~~~~~~~a~~~l~~l~~~~ 435 (443)
++++||| ++..++||||.++++.+.+++++.++++||||||+..|+++|.++|.+|++++++++.++|++|+++|+++|
T Consensus 305 l~~a~Sr~~~~~k~yVq~~l~~~~~~l~~~l~~~~~vYvCGp~~~M~~~V~~~L~~i~~~~~~~~~~~a~~~~~~l~~~~ 384 (393)
T 4dql_A 305 LHTAFSRMPNQPKTYVQHVMEQDGKKLIELLDQGAHFYICGDGSQMAPAVEATLMKSYADVHQVSEADARLWLQQLEEKG 384 (393)
T ss_dssp EEEEESSCTTSCCCCHHHHHHHTHHHHHHHHHTTCEEEEEEETTTHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHTT
T ss_pred EEEEEeCCCCCCCcchhhHHHhCHHHHHHHHhCCcEEEEECCchhhHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHCC
Confidence 9999999 555799999999999999999998899999999976999999999999999999999999999999999999
Q ss_pred CEEEeecC
Q 013425 436 RYHVEAWS 443 (443)
Q Consensus 436 Ry~~dvWs 443 (443)
||++||||
T Consensus 385 Ry~~dv~s 392 (393)
T 4dql_A 385 RYAKDVWA 392 (393)
T ss_dssp CEEEEEEC
T ss_pred CEEEEecc
Confidence 99999997
No 5
>1f20_A Nitric-oxide synthase; nitric-xoide synthase, reductase domain, FAD, NADP+, oxidore; HET: FAD NAP; 1.90A {Rattus norvegicus} SCOP: b.43.4.1 c.25.1.4
Probab=100.00 E-value=8.3e-78 Score=623.90 Aligned_cols=389 Identities=30% Similarity=0.559 Sum_probs=344.6
Q ss_pred cCccce-eEEEeeeecCCCCCCcEEEEEEEecCC-CcccCCCCEEEEccCCCHHHHHHHHHHcCC--CCCceEEEeeCCc
Q 013425 42 KAVCFL-KMIKNQPLTKSGSGKDVHHFEFEFVSA-AIEYEVGDVLEILPSQDPAAVDTFIQRCNL--DPDALITVQHKEM 117 (443)
Q Consensus 42 ~~~~~~-~v~~~~~Lt~~~~~~~v~~i~l~~~~~-~~~y~~GD~l~I~p~N~~~~V~~~l~~l~l--~~~~~v~i~~~~~ 117 (443)
..+.|. +|++|++||+++++++|+||+||++++ +++|+|||+|+|+|.|+++.|+++|++||+ +.++.|+++....
T Consensus 27 ~~~~~~a~v~~~~~l~~~~~~~~~~hiel~~~~~~~~~Y~~GD~l~V~p~N~~~~V~~~l~~l~~~~~~d~~v~~~~~~~ 106 (435)
T 1f20_A 27 KKRVSAARLLSRQNLQSPKSSRSTIFVRLHTNGNQELQYQPGDHLGVFPGNHEDLVNALIERLEDAPPANHVVKVEMLEE 106 (435)
T ss_dssp TSCCEEEEEEEEEECSCTTCSSCEEEEEEECTTCGGGCCCTTCEEEECCCCCHHHHHHHHTTBSSCCCTTSCEEEEEEEE
T ss_pred cCCcEEEEEEeEEECCCCCCCceEEEEEEECCCCCCCcCCCCCEEEEEecCCHHHHHHHHHHhCCCCCCCeEEEEecccc
Confidence 445666 999999999999999999999999754 799999999999999999999999999976 6688898864211
Q ss_pred c----CCCCcc-ccCCCCCcchHHHHHHHccccCCCCCCHHHHHHHHHhccChhHHHHHHhhcCCCChHHHHHHHHhcCC
Q 013425 118 K----NYLPDI-HKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERR 192 (443)
Q Consensus 118 ~----~~~~~~-~~~~~~~~~tl~~ll~~~~Dl~~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~~ 192 (443)
. ...+.| ...++| ++|++++|++|+||++ +|+++||+.||.||+|+.+|++|+.|++ +.+.|.+|+....+
T Consensus 107 ~~~~~~~~~~~~~~~~~p-~~tl~~~l~~~~di~~-~p~~~~l~~la~~~~~~~~k~~L~~l~~--~~~~~~~~~~~~~~ 182 (435)
T 1f20_A 107 RNTALGVISNWKDESRLP-PCTIFQAFKYYLDITT-PPTPLQLQQFASLATNEKEKQRLLVLSK--GLQEYEEWKWGKNP 182 (435)
T ss_dssp ESSSTTCEEEEEECCSSC-SBCHHHHHHHTBCCSS-CCCHHHHHHHHTTBCCHHHHHHHHHHTT--CSHHHHHHHHHHCC
T ss_pred ccCCCCccccccccCCCC-CccHHHHHHhceecCC-CCCHHHHHHHHHHCCCHHHHHHHHHhhc--CHHHHHHHHhccCC
Confidence 0 000000 123456 9999999999999999 9999999999999999999999999997 78999999999999
Q ss_pred CHHHHHhhCCCCCCCHHHHHHhcCCCCcceeecCCCCCCCCCeEEEEEEEEEecCCCC--cccCCcccccccCCCCCCCc
Q 013425 193 TVLEVLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYK--RKRTGLCSVWLAGLDPQQGI 270 (443)
Q Consensus 193 ~l~d~L~~f~s~~~p~~~ll~~lp~~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~--~~~~G~~S~~L~~l~~~~G~ 270 (443)
+++|+|.+||++++|+++++..+|++++|+|||||+|..+++.++|+|+++.|.++.+ +.+.|.||+||+++++ |+
T Consensus 183 ~i~~vl~~fps~~~p~~~l~~~lp~l~~R~YSIsSsp~~~~~~i~l~v~vv~~~~~~g~~~~~~G~~S~~L~~l~~--Gd 260 (435)
T 1f20_A 183 TMVEVLEEFPSIQMPATLLLTQLSLLQPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHHGVCSSWLNRIQA--DD 260 (435)
T ss_dssp CHHHHHHHSTTBCBCHHHHHHHSCBCCCEEEECCSCTTTSTTEEEEEEECCEEECGGGTSCEEECHHHHHHTTCCT--TC
T ss_pred CHHHHHHhCCcCCCCHHHHHHhCCCCCCccccccCCcccCCCeEEEEEEEEEEecCCCCCcccCCccchhHhhCCC--CC
Confidence 9999999999999999999999999999999999999876899999999999987543 4668999999999999 99
Q ss_pred EEEEEee-cCCCCCC-CCCCCeEEEeCCccchhHHHHHHHHHHhcC--CCCCCCEEEEEeecCCc-cccCHHHHHHhhhc
Q 013425 271 YIPAWFQ-KGSLPRP-PPSVPLILIGPGTGCAPFRGFVEERAIQSS--SGPAAPIIFFFGCRNED-DFLYRELWLSHSLN 345 (443)
Q Consensus 271 ~v~i~~~-~g~F~lp-~~~~piImIa~GTGIAPfrs~lq~~~~~~~--~~~~~~~~L~~G~R~~~-d~ly~~el~~~~~~ 345 (443)
.|.+.++ .|.|++| ++.+|+||||+|||||||+||++++..... .+..++++||||||+++ |++|++||+++.+.
T Consensus 261 ~v~v~~~~~g~F~lp~~~~~piilIagGtGIAP~~s~l~~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~~El~~~~~~ 340 (435)
T 1f20_A 261 VVPCFVRGAPSFHLPRNPQVPCILVGPGTGIAPFRSFWQQRQFDIQHKGMNPCPMVLVFGCRQSKIDHIYREETLQAKNK 340 (435)
T ss_dssp EEEEEEECCTTSSCCSCTTSCEEEECCGGGGHHHHHHHHHHHHHHHHHCCCCCCEEEEEEESCTTTSCTTHHHHHHHHHT
T ss_pred EEEEEEecCCCccCCCCCCCCEEEEECCcCcHHHHHHHHHHHHhhhhccCCCCCEEEEEeecccccchhHHHHHHHHHHc
Confidence 9999995 5699999 778999999999999999999999987420 00127999999999998 99999999999987
Q ss_pred CCCccccCCCeEEEEEccCCCC-cccchhhHHHc-HHHHHHhhc-CCCEEEEeCCCCchHHHHHHHHHHHHHHhCCCCHH
Q 013425 346 DGVFSEAKGGGFYVAFSRKQPQ-KVYVQHKMLEQ-SQRIWNLLL-SKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRD 422 (443)
Q Consensus 346 ~g~l~~~~~~~~~~a~Sr~~~~-k~yVqd~l~~~-~~~l~~~l~-~~~~iyvCG~~~~M~~~V~~~L~~i~~~~~~~~~~ 422 (443)
+.+. +++++|||++.. ++||||+|.++ .+.+++++. .+++||||||+ .|+++|.++|.+++.++++++.+
T Consensus 341 -~~~~-----~l~~a~Sr~~~~~k~yVq~~l~~~l~~~~~~~l~~~~~~vYvCGp~-~M~~~V~~~L~~i~~~~~~~~~~ 413 (435)
T 1f20_A 341 -GVFR-----ELYTAYSREPDRPKKYVQDVLQEQLAESVYRALKEQGGHIYVCGDV-TMAADVLKAIQRIMTQQGKLSEE 413 (435)
T ss_dssp -TSEE-----EEEEEESSCTTSCCCCHHHHHHHHSHHHHHHHHHTSCCEEEEEECH-HHHHHHHHHHHHHHHHHTTCCHH
T ss_pred -CCcc-----EEEEEECCCCCCCCcchhhHHHhhhHHHHHHHHhcCCcEEEEeCCh-hHHHHHHHHHHHHHHHcCCCCHH
Confidence 5554 899999999764 89999999988 788888874 58999999999 99999999999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEeecC
Q 013425 423 SAANWLKALQRAGRYHVEAWS 443 (443)
Q Consensus 423 ~a~~~l~~l~~~~Ry~~dvWs 443 (443)
+|++|+++|+++|||++|||+
T Consensus 414 ~a~~~~~~l~~~~RY~~Dv~~ 434 (435)
T 1f20_A 414 DAGVFISRLRDDNRYHEDIFG 434 (435)
T ss_dssp HHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHCCCEEEEecC
Confidence 999999999999999999997
No 6
>2bpo_A CPR, P450R, NADPH-cytochrom P450 reductase; NADPH-cytochrome P450 reductase, diflavin reductase, FAD, FMN-binding, electron transfer; HET: FAD FMN NAP; 2.9A {Saccharomyces cerevisiae} PDB: 2bn4_A* 2bf4_A*
Probab=100.00 E-value=5.1e-78 Score=656.35 Aligned_cols=386 Identities=28% Similarity=0.501 Sum_probs=346.1
Q ss_pred cCccce-eEEEeeeecCCCCCCcEEEEEEEecCCCcccCCCCEEEEccCCCHHHHHHHHHHcCCCCCceEEEeeCCccCC
Q 013425 42 KAVCFL-KMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEMKNY 120 (443)
Q Consensus 42 ~~~~~~-~v~~~~~Lt~~~~~~~v~~i~l~~~~~~~~y~~GD~l~I~p~N~~~~V~~~l~~l~l~~~~~v~i~~~~~~~~ 120 (443)
..++|. +|++|++||+ +++++|+||+||+++++++|+|||+|+|+|.|+++.|+++|++||+++++.|++.+.....
T Consensus 256 ~~~p~~a~v~~~~~L~~-~~~~~~~hie~d~~~~~~~Y~~GD~l~V~P~N~~~~V~~~l~~l~l~~d~~v~~~~~~~~~- 333 (682)
T 2bpo_A 256 LSQPYIAPIVKSRELFS-SNDRNCIHSEFDLSGSNIKYSTGDHLAVWPSNPLEKVEQFLSIFNLDPETIFDLKPLDPTV- 333 (682)
T ss_dssp TTBCCCEEEEEEEECCC-CSSCCEEEEEEECTTBTCCCCTTCEEEECCCCCHHHHHHHHHHHTCCTTCEEECCBSSTTC-
T ss_pred CCCceEEEEEEEEEccC-CCCCCEEEEEEEcCCCCceecCCCEEEEEcCCCHHHHHHHHHHhhccCCcEEEEecCCccc-
Confidence 345676 9999999998 7889999999999878999999999999999999999999999999999999987543321
Q ss_pred CCccccCCCCCcchHHHHHHHccccCCCCCCHHHHHHHHHhccChhHHHHHHhhcCCCChHHHHHHHHhcCCCHHHHHhh
Q 013425 121 LPDIHKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTVLEVLED 200 (443)
Q Consensus 121 ~~~~~~~~~~~~~tl~~ll~~~~Dl~~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~~~l~d~L~~ 200 (443)
..++|.++|++++|++|+||++ +|+++||+.||.||+|+.+|++|++|+ +|+++|.+|+.++++|++|+|.+
T Consensus 334 -----~~p~p~~~tl~~~l~~~ldi~~-~p~~~~l~~la~~a~~~~~k~~L~~l~--~~~~~~~~~~~~~~~~i~dvL~~ 405 (682)
T 2bpo_A 334 -----KVPFPTPTTIGAAIKHYLEITG-PVSRQLFSSLIQFAPNADVKEKLTLLS--KDKDQFAVEITSKYFNIADALKY 405 (682)
T ss_dssp -----CCSSCSSEEHHHHHHHTBCCSS-CCCHHHHHHHSTTCSSHHHHHHHHHHT--TCHHHHHHHTGGGTCCHHHHHHH
T ss_pred -----CCCCCCCccHHHHHHHhhhccC-CCCHHHHHHHHHHCCCHHHHHHHHHhc--cCHHHHHHHHhcCCCCHHHHHHh
Confidence 2246899999999999999999 999999999999999999999999999 69999999999999999999999
Q ss_pred CC----CCCCCHHHHHHhcCCCCcceeecCCCCCCCCCeEEEEEEEEEecCCC---CcccCCcccccccCCCCC------
Q 013425 201 FP----SVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPY---KRKRTGLCSVWLAGLDPQ------ 267 (443)
Q Consensus 201 f~----s~~~p~~~ll~~lp~~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~---~~~~~G~~S~~L~~l~~~------ 267 (443)
|| ++++|+++++..+|+++||+|||||+|..+++.++|+|++++|+++. ++.+.|+||+||+++++.
T Consensus 406 fp~~~~s~~~p~~~l~~~lp~l~~R~YSIsSsp~~~~~~i~ltv~Vv~~~~~~~~~~~~~~G~~S~~L~~l~~g~~~~~~ 485 (682)
T 2bpo_A 406 LSDGAKWDTVPMQFLVESVPQMTPRYYSISSSSLSEKQTVHVTSIVENFPNPELPDAPPVVGVTTNLLRNIQLAQNNVNI 485 (682)
T ss_dssp HHTTCCCTTSCHHHHHHHSCBCCCEEEEBCSCTTTCTTEEEEEEECCEECCSSCTTSCCEECHHHHHHHHHHHHHTTCCT
T ss_pred ccCcccccCCCHHHHHHhCcccccccccccCCcccCCCeEEEEEEEEEEecCcccCCcccCccccHHHHhcccccccccc
Confidence 99 89999999999999999999999999987789999999999999876 677899999999876550
Q ss_pred ----CC--------------cEEEEEeecCCCCCC-CCCCCeEEEeCCccchhHHHHHHHHHHhcC------CC-CCCCE
Q 013425 268 ----QG--------------IYIPAWFQKGSLPRP-PPSVPLILIGPGTGCAPFRGFVEERAIQSS------SG-PAAPI 321 (443)
Q Consensus 268 ----~G--------------~~v~i~~~~g~F~lp-~~~~piImIa~GTGIAPfrs~lq~~~~~~~------~~-~~~~~ 321 (443)
.| ..|.++++.+.|++| ++.+|+||||+||||||||||+|++..+.. .+ ..+++
T Consensus 486 ~~~~~G~~v~i~GP~G~f~~~~v~v~vr~~~F~Lp~~~~~piImIg~GTGIAPfrs~lq~r~~~~~~~~~~~~g~~~~~~ 565 (682)
T 2bpo_A 486 AETNLPVHYDLNGPRKLFANYKLPVHVRRSNFRLPSNPSTPVIMIGPGTGVAPFRGFIRERVAFLESQKKGGNNVSLGKH 565 (682)
T ss_dssp TTSCCCCCCCSSCGGGTTTTTEECEEEECCSCCCCSSTTSCEEEEEEGGGGHHHHHHHHHHHHHHHTCC----CCCCCCE
T ss_pred cccccccceeeccCcCcccCceEEEEEecCcccCCCCCCCCEEEEecCcChHHHHHHHHHHHHhhcccccccccCCcCCE
Confidence 02 366677766778999 778999999999999999999999987543 11 24799
Q ss_pred EEEEeecCCccccCHHHHHHhhhcCCCccccCCCeEEEEEcc-CCCCcccchhhHHHcHHHHHHhhcCCCEEEEeCCCCc
Q 013425 322 IFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSR-KQPQKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATK 400 (443)
Q Consensus 322 ~L~~G~R~~~d~ly~~el~~~~~~~g~l~~~~~~~~~~a~Sr-~~~~k~yVqd~l~~~~~~l~~~l~~~~~iyvCG~~~~ 400 (443)
+||||||++.|++|++||++|.+..|... ++++|||| ++..++||||+|.++.+.+++++.++++||||||+..
T Consensus 566 ~L~fG~R~~~D~ly~dEl~~~~~~~g~~~-----~l~~afSr~d~~~k~yVqd~l~e~~~~l~~~l~~~~~vYvCGpa~~ 640 (682)
T 2bpo_A 566 ILFYGSRNTDDFLYQDEWPEYAKKLDGSF-----EMVVAHSRLPNTKKVYVQDKLKDYEDQVFEMINNGAFIYVCGDAKG 640 (682)
T ss_dssp EEEEEESSSSSCTTTTTHHHHHHHHGGGE-----EEEEEESCCTTSCCCCHHHHHHHTHHHHHHHHTTTCEEEEEECSTT
T ss_pred EEEEecCChhhhhhHHHHHHHHHhcCCce-----EEEEEECCCCCCCCcchHHHHHhhHHHHHHHHhCCcEEEEeCCchH
Confidence 99999999999999999999954325333 89999999 5667999999999999999999977999999999549
Q ss_pred hHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCEEEeec
Q 013425 401 MPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAW 442 (443)
Q Consensus 401 M~~~V~~~L~~i~~~~~~~~~~~a~~~l~~l~~~~Ry~~dvW 442 (443)
|+++|.++|.+|++++++++.++|++|+++|+++|||++|||
T Consensus 641 M~~~V~~~L~~i~~~~~~~~~~~a~~~~~~l~~~~Ry~~Dvw 682 (682)
T 2bpo_A 641 MAKGVSTALVGILSRGKSITTDEATELIKMLKTSGRYQEDVW 682 (682)
T ss_dssp HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEEC
T ss_pred hHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCEEEEeC
Confidence 999999999999999999999999999999999999999999
No 7
>1ddg_A Sulfite reductase (NADPH) flavoprotein alpha- component; cytochrome P450 reductase, FNR, modular protein, oxidoreductase; HET: FAD; 2.01A {Escherichia coli} SCOP: b.43.4.1 c.25.1.4 PDB: 1ddi_A*
Probab=100.00 E-value=4.4e-76 Score=599.90 Aligned_cols=364 Identities=30% Similarity=0.518 Sum_probs=333.7
Q ss_pred cccCccce-eEEEeeeecCCCCCCcEEEEEEEecCCCcccCCCCEEEEccCCCHHHHHHHHHHcCCCCCceEEEeeCCcc
Q 013425 40 NNKAVCFL-KMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEMK 118 (443)
Q Consensus 40 ~~~~~~~~-~v~~~~~Lt~~~~~~~v~~i~l~~~~~~~~y~~GD~l~I~p~N~~~~V~~~l~~l~l~~~~~v~i~~~~~~ 118 (443)
.+..++|. +|++|++||+++++++|+||+||+++++++|+|||+|+|+|+|+++.|+++|++||+++++.|++.
T Consensus 6 ~~~~~~~~a~v~~~~~lt~~~~~~~~~hi~~~~~~~~~~y~~GD~l~v~p~N~~~~V~~~l~~l~~~~~~~v~~~----- 80 (374)
T 1ddg_A 6 YSKDAPLVASLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVE----- 80 (374)
T ss_dssp CBTTBCEEEEEEEEEECSCTTCSSEEEEEEEECTTSCCCCCTTCEEEECCCCCHHHHHHHHHHTTCCSCSEEEET-----
T ss_pred CCCCCCEEEEEEEEEEeCCCCCCceEEEEEEEcCCCCcccCCCCEEEEEcCCCHHHHHHHHHHhCCCCCceEEEC-----
Confidence 44566777 999999999999999999999999878899999999999999999999999999999999998873
Q ss_pred CCCCccccCCCCCcchHHHHHHHccccCCCCCCHHHHHHHHHhccChhHHHHHHhhcCCCChHHHHHHHHhcCCCHHHHH
Q 013425 119 NYLPDIHKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTVLEVL 198 (443)
Q Consensus 119 ~~~~~~~~~~~~~~~tl~~ll~~~~Dl~~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~~~l~d~L 198 (443)
+.++|++++|++|+||+. |+++||+.||.||+|+. |++|++ +++.|.+|+. +++++|+|
T Consensus 81 -----------~~~~tl~~~l~~~~di~~--p~~~~l~~la~~~~~~~----L~~l~~--~~~~~~~~~~--~~~~~~vl 139 (374)
T 1ddg_A 81 -----------GKTLPLNEALQWHFELTV--NTANIVENYATLTRSET----LLPLVG--DKAKLQHYAA--TTPIVDMV 139 (374)
T ss_dssp -----------TEEEEHHHHHHHHBCCSC--CCHHHHHHHHHHHTCTT----TGGGTT--CTHHHHHHHH--HSCHHHHH
T ss_pred -----------CCCccHHHHHHhcccCCC--CCHHHHHHHHHHCCCHH----HHHHhc--ChHHHHHHHc--CCCHHHHH
Confidence 368999999999999995 79999999999999974 888884 7788999986 58999999
Q ss_pred hhCCCCCCCHHHHHHhcCCCCcceeecCCCCCCCCCeEEEEEEEEEecCCCCcccCCcccccccC-CCCCCCcEEEEEee
Q 013425 199 EDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAG-LDPQQGIYIPAWFQ 277 (443)
Q Consensus 199 ~~f~s~~~p~~~ll~~lp~~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~~-l~~~~G~~v~i~~~ 277 (443)
.+||+ +++.++++..++++++|+|||||+|..+++.++|+|+++.|++. ++.+.|.||+||++ +++ |+.|.+.++
T Consensus 140 ~~~p~-~~~~Gq~v~l~~~~~~R~YSIaSsp~~~~~~i~l~V~~v~~~~~-~~~~~G~~S~~L~~~l~~--Gd~v~v~~~ 215 (374)
T 1ddg_A 140 RFSPA-QLDAEALINLLRPLTPRLYSIASSQAEVENEVHVTVGVVRYDVE-GRARAGGASSFLADRVEE--EGEVRVFIE 215 (374)
T ss_dssp HHSCC-CCCHHHHHHHSCBCCCEEEEBCCCTTTSCSEEEEEEEECEEEET-TEEEECHHHHHHHHSCCS--SCEEEEEEE
T ss_pred HHCCC-CCCHHHHHhhccCCCCccceecCCCCCCCCEEEEEEEEEEeecC-CCCCCCCchHHHHhcCCC--CCEEEEEEe
Confidence 99998 88888888888899999999999997667999999999999886 66678999999997 999 999999996
Q ss_pred c-CCCCCC-CCCCCeEEEeCCccchhHHHHHHHHHHhcCCCCCCCEEEEEeecCC-ccccCHHHHHHhhhcCCCccccCC
Q 013425 278 K-GSLPRP-PPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNE-DDFLYRELWLSHSLNDGVFSEAKG 354 (443)
Q Consensus 278 ~-g~F~lp-~~~~piImIa~GTGIAPfrs~lq~~~~~~~~~~~~~~~L~~G~R~~-~d~ly~~el~~~~~~~g~l~~~~~ 354 (443)
. |.|.+| ++.+|+||||+|||||||+||++++...+.. ++++||||||++ .|++|++||+++.+. +.+.
T Consensus 216 ~~g~F~lp~~~~~piimIa~GtGIAP~~s~l~~~~~~~~~---~~~~L~~G~R~~~~d~ly~~El~~~~~~-~~~~---- 287 (374)
T 1ddg_A 216 HNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAADEAP---GKNWLFFGNPHFTEDFLYQVEWQRYVKE-GVLT---- 287 (374)
T ss_dssp CCTTSCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHTCC---SCEEEEEEESCHHHHCTTHHHHHHHHHT-TSCC----
T ss_pred eCCCccCCCCCCCCEEEEECCccHHHHHHHHHHHHhcCCC---CCEEEEEEeCCchhhhhHHHHHHHHHHh-CCCc----
Confidence 5 599999 7889999999999999999999999887655 899999999998 499999999999987 5444
Q ss_pred CeEEEEEccCCCCcccchhhHHHcHHHHHHhhcCCCEEEEeCCCCchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Q 013425 355 GGFYVAFSRKQPQKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRA 434 (443)
Q Consensus 355 ~~~~~a~Sr~~~~k~yVqd~l~~~~~~l~~~l~~~~~iyvCG~~~~M~~~V~~~L~~i~~~~~~~~~~~a~~~l~~l~~~ 434 (443)
+++++|||+++.++|||+.|.++.+.+++++.++++|||||++..|+++|.++|.+++.++++++.++|++|+++|+++
T Consensus 288 -~l~~a~Srd~~~k~yVq~~l~~~~~~l~~~l~~~~~vYvCG~p~~M~~~V~~~L~~i~~~~~~~~~~~a~~~~~~l~~~ 366 (374)
T 1ddg_A 288 -RIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVE 366 (374)
T ss_dssp -EEEEEETTSSSSCCCHHHHHHHTHHHHHHHHHTTCEEEEEECTTTHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHT
T ss_pred -EEEEEEecCCCCCccHHHHHHHhHHHHHHHHhCCcEEEEECCCHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHC
Confidence 8999999998889999999999999999999889999999944499999999999999999999999999999999999
Q ss_pred CCEEEeec
Q 013425 435 GRYHVEAW 442 (443)
Q Consensus 435 ~Ry~~dvW 442 (443)
|||++|||
T Consensus 367 ~Ry~~dv~ 374 (374)
T 1ddg_A 367 RRYQRDVY 374 (374)
T ss_dssp TCEEEEEC
T ss_pred CCeEEecC
Confidence 99999999
No 8
>1tll_A Nitric-oxide synthase, brain; reductase module, FMN, FAD, NADP+, oxidoreductase; HET: FMN FAD NAP; 2.30A {Rattus norvegicus} SCOP: b.43.4.1 c.23.5.2 c.25.1.4
Probab=100.00 E-value=1.1e-72 Score=614.57 Aligned_cols=387 Identities=30% Similarity=0.558 Sum_probs=342.9
Q ss_pred ccce-eEEEeeeecCCCCCCcEEEEEEEecCC-CcccCCCCEEEEccCCCHHHHHHHHHHcCC--CCCceEEEeeCCcc-
Q 013425 44 VCFL-KMIKNQPLTKSGSGKDVHHFEFEFVSA-AIEYEVGDVLEILPSQDPAAVDTFIQRCNL--DPDALITVQHKEMK- 118 (443)
Q Consensus 44 ~~~~-~v~~~~~Lt~~~~~~~v~~i~l~~~~~-~~~y~~GD~l~I~p~N~~~~V~~~l~~l~l--~~~~~v~i~~~~~~- 118 (443)
..|. +|++|++||+++++++|+||+|+++++ +++|+|||+|+|+|.|+++.|+++|++||+ ++++.|++......
T Consensus 250 ~~~~a~v~~~~~Lt~~~~~~~~~hiel~~~~~~~~~Y~~GD~l~V~P~N~~~~V~~~l~~l~~~~~~d~~v~~~~~~~~~ 329 (688)
T 1tll_A 250 RVSAARLLSRQNLQSPKSSRSTIFVRLHTNGNQELQYQPGDHLGVFPGNHEDLVNALIERLEDAPPANHVVKVEMLEERN 329 (688)
T ss_dssp CCEEEEEEEEEECSCTTCSSCEEEEEEECTTCGGGCCCTTCEEEECCCCCHHHHHHHHTTCSSCCCSCSCEEEEEEEECC
T ss_pred CceEEEEEeeeecCCCCCCceEEEEEEecCCCCCCccCCCCEEEEecCCCHHHHHHHHHHhCCCCCCCeEEEEecccccc
Confidence 4566 999999999999999999999999754 799999999999999999999999999986 57788888643110
Q ss_pred ---CCCCcc-ccCCCCCcchHHHHHHHccccCCCCCCHHHHHHHHHhccChhHHHHHHhhcCCCChHHHHHHHHhcCCCH
Q 013425 119 ---NYLPDI-HKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTV 194 (443)
Q Consensus 119 ---~~~~~~-~~~~~~~~~tl~~ll~~~~Dl~~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~~~l 194 (443)
...+.| ...++| ++|++++|++|+||++ +|+++||+.||.||+|+.+|++|+.|++ +.+.|.+|+...++++
T Consensus 330 ~p~~~~~~~~~~~~~p-~~tl~~~l~~~lDi~~-~p~~~~l~~la~~a~~~~ek~~L~~l~~--~~~~~~~~~~~~~~~i 405 (688)
T 1tll_A 330 TALGVISNWKDESRLP-PCTIFQAFKYYLDITT-PPTPLQLQQFASLATNEKEKQRLLVLSK--GLQEYEEWKWGKNPTM 405 (688)
T ss_dssp CSSSCCEEEEECCSSC-SBCHHHHHHHTBCCSS-CCCHHHHHHHHTTBCCHHHHHHHHHHTT--CSHHHHHHHHHHCCCH
T ss_pred CCCcccccccccCCCC-CccHHHHHHhheeCCC-CCCHHHHHHHHHHcCCHHHHHHHHHHhc--CHHHHHHHHhhcCCCH
Confidence 000001 123456 9999999999999999 9999999999999999999999999997 7899999999999999
Q ss_pred HHHHhhCCCCCCCHHHHHHhcCCCCcceeecCCCCCCCCCeEEEEEEEEEecCCCC--cccCCcccccccCCCCCCCcEE
Q 013425 195 LEVLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYK--RKRTGLCSVWLAGLDPQQGIYI 272 (443)
Q Consensus 195 ~d~L~~f~s~~~p~~~ll~~lp~~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~--~~~~G~~S~~L~~l~~~~G~~v 272 (443)
+|+|.+||++++|+++++..+|++++|+|||||+|..+++.++|+|+++.|.++.+ +.+.|.||+||+++++ |+.|
T Consensus 406 ~evl~~fps~~~p~~~l~~~lp~l~~R~YSIsSsp~~~~~~i~l~V~vv~~~~~~g~~~~~~G~~S~~L~~l~~--Gd~v 483 (688)
T 1tll_A 406 VEVLEEFPSIQMPATLLLTQLSLLQPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHHGVCSSWLNRIQA--DDVV 483 (688)
T ss_dssp HHHHHHSTTBCCCHHHHHHHSCBCCCEEEEBCSCTTTSTTEEEEEEECCEEETGGGTSCEEECHHHHHHTTCCT--TSEE
T ss_pred HHHHHhCCCcCCCHHHHHHhCcccceeEEeecCCcccCCCeEEEEEEEEEEecCCCCCCcCCCchhHHHHhCCC--CCEE
Confidence 99999999999999999999999999999999999876899999999999977543 5678999999999999 9999
Q ss_pred EEEeec-CCCCCC-CCCCCeEEEeCCccchhHHHHHHHHHHhcC--CCCCCCEEEEEeecCCc-cccCHHHHHHhhhcCC
Q 013425 273 PAWFQK-GSLPRP-PPSVPLILIGPGTGCAPFRGFVEERAIQSS--SGPAAPIIFFFGCRNED-DFLYRELWLSHSLNDG 347 (443)
Q Consensus 273 ~i~~~~-g~F~lp-~~~~piImIa~GTGIAPfrs~lq~~~~~~~--~~~~~~~~L~~G~R~~~-d~ly~~el~~~~~~~g 347 (443)
.+.++. |.|++| ++.+|+||||+|||||||+||++++..... .+..++++||||||+++ |++|++||++|.+. +
T Consensus 484 ~v~~~p~g~F~lp~~~~~piIlIagGtGIAP~~s~l~~~~~~~~~~~~~~~~v~L~~G~R~~~~D~ly~dEL~~~~~~-~ 562 (688)
T 1tll_A 484 PCFVRGAPSFHLPRNPQVPCILVGPGTGIAPFRSFWQQRQFDIQHKGMNPCPMVLVFGCRQSKIDHIYREETLQAKNK-G 562 (688)
T ss_dssp EEEEECCGGGSCCSCTTSCEEEEEEGGGGTTHHHHHHHHHHHHHHSCCCCCCEEEEEEESCTTTTCTTHHHHHHHHHT-T
T ss_pred EEEeccCCCcccCcCCCCCEEEEEcCcchHHHHHHHHHHHHhhhhccCCCCCEEEEEEeccchhhhhHHHHHHHHHHc-C
Confidence 999955 599999 778999999999999999999999987520 01237999999999998 99999999999987 5
Q ss_pred CccccCCCeEEEEEccCCCC-cccchhhHHHc-HHHHHHhh-cCCCEEEEeCCCCchHHHHHHHHHHHHHHhCCCCHHHH
Q 013425 348 VFSEAKGGGFYVAFSRKQPQ-KVYVQHKMLEQ-SQRIWNLL-LSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSA 424 (443)
Q Consensus 348 ~l~~~~~~~~~~a~Sr~~~~-k~yVqd~l~~~-~~~l~~~l-~~~~~iyvCG~~~~M~~~V~~~L~~i~~~~~~~~~~~a 424 (443)
.+. +++++|||++.. ++||||+|.++ .+.+++++ ..+++||||||+ .|+++|.++|.+++.+.++++.++|
T Consensus 563 ~~~-----~l~~a~Sr~~~~~k~yVq~~l~~~l~~~l~~~l~~~~~~vYvCGp~-~M~~~V~~~L~~i~~~~gg~~~~~a 636 (688)
T 1tll_A 563 VFR-----ELYTAYSREPDRPKKYVQDVLQEQLAESVYRALKEQGGHIYVCGDV-TMAADVLKAIQRIMTQQGKLSEEDA 636 (688)
T ss_dssp SEE-----EEEEEESSCTTSCCCCHHHHHHHSSHHHHHHHHHTSCCEEEEEEEH-HHHHHHHHHHHHHHHTTTCCCTTHH
T ss_pred Cce-----EEEEEECCCCCCCccchhhhhHHhHHHHHHHhhccCCcEEEEeCCH-HHHHHHHHHHHHHHHHcCCCCHHHH
Confidence 443 899999999764 89999999988 78888877 458999999998 9999999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEeecC
Q 013425 425 ANWLKALQRAGRYHVEAWS 443 (443)
Q Consensus 425 ~~~l~~l~~~~Ry~~dvWs 443 (443)
++|+++|+.++||+.|+|+
T Consensus 637 ~~~l~~l~~~~ry~~Evf~ 655 (688)
T 1tll_A 637 GVFISRLRDDNRYHEDIFG 655 (688)
T ss_dssp HHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHhhhhcCCEEEEecC
Confidence 9999999999999999994
No 9
>1fnb_A Ferredoxin-NADP+ reductase; oxidoreductase (NADP+(A),ferredoxin(A)); HET: FAD; 1.70A {Spinacia oleracea} SCOP: b.43.4.2 c.25.1.1 PDB: 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 1qg0_A* 1qga_A* 1qfz_A* 1qfy_A* 1gaw_A* 1gaq_A* 3mhp_A* 1sm4_A* 2xnc_A*
Probab=100.00 E-value=9.3e-40 Score=324.59 Aligned_cols=265 Identities=25% Similarity=0.452 Sum_probs=222.6
Q ss_pred ccce-eEEEeeeecCCCCCCcEEEEEEEecCCCcccCCCCEEEEccCCCHHHHHHHHHHcCCCCCceEEEeeCCccCCCC
Q 013425 44 VCFL-KMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLP 122 (443)
Q Consensus 44 ~~~~-~v~~~~~Lt~~~~~~~v~~i~l~~~~~~~~y~~GD~l~I~p~N~~~~V~~~l~~l~l~~~~~v~i~~~~~~~~~~ 122 (443)
..+. +|++++++|+.++.+++++|+|+.++ ...|+||+++.|.++|..
T Consensus 36 ~~~~~~V~~~~~lt~~~~~~~v~~l~l~~~~-~~~~~pGQ~v~l~~~~~~------------------------------ 84 (314)
T 1fnb_A 36 TPYVGRCLLNTKITGDDAPGETWHMVFSHEG-EIPYREGQSVGVIPDGED------------------------------ 84 (314)
T ss_dssp BCEEEEEEEEEECSCSSSSSCEEEEEEECTT-CCCCCTTCEEEEECSSBC------------------------------
T ss_pred CCEEEEEEEEEEecCCCCCCcEEEEEEecCC-CCCcCCCCEEEEecCCCC------------------------------
Confidence 3455 99999999988888899999999874 489999999999876520
Q ss_pred ccccCCCCCcchHHHHHHHccccCCCCCCHHHHHHHHHhccChhHHHHHHhhcCCCChHHHHHHHHhcCCCHHHHHhhCC
Q 013425 123 DIHKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTVLEVLEDFP 202 (443)
Q Consensus 123 ~~~~~~~~~~~tl~~ll~~~~Dl~~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~~~l~d~L~~f~ 202 (443)
..+
T Consensus 85 ----------------------~~g------------------------------------------------------- 87 (314)
T 1fnb_A 85 ----------------------KNG------------------------------------------------------- 87 (314)
T ss_dssp ----------------------TTS-------------------------------------------------------
T ss_pred ----------------------cCC-------------------------------------------------------
Confidence 000
Q ss_pred CCCCCHHHHHHhcCCCCcceeecCCCCCC---CCCeEEEEEEEEEecCCCCcccCCcccccccCCCCCCCcEEEEEeecC
Q 013425 203 SVQMPIDWLVQLVPPLKTRAFSISSSPLA---HPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIPAWFQKG 279 (443)
Q Consensus 203 s~~~p~~~ll~~lp~~~pR~YSIaSsp~~---~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~~~G~~v~i~~~~g 279 (443)
.+..+|+|||+|+|.. .++.++|+|+.+.|.+..+..+.|.+|+||+++++ |+.|.+.+|.|
T Consensus 88 -------------~~~~~R~ySi~s~p~~~~~~~~~~~l~Vk~~~y~~~~g~~~~G~~S~~L~~l~~--Gd~v~v~gP~G 152 (314)
T 1fnb_A 88 -------------KPHKLRLYSIASSALGDFGDAKSVSLCVKRLIYTNDAGETIKGVCSNFLCDLKP--GAEVKLTGPVG 152 (314)
T ss_dssp -------------SBCCCEEEECCSCSSCTTSSSCEEEEEEECCEEECTTSCEEECHHHHHHHHCCT--TCEEEEEEEEC
T ss_pred -------------CcCCceeEecCCCCcccCCCCCEEEEEEEEEEeccCCCCcCCCchhhHhhcCCC--CCEEEEEeccC
Confidence 0247899999999863 25899999999888776666678999999999999 99999999999
Q ss_pred CCC-CC-CCCCCeEEEeCCccchhHHHHHHHHHHhcCCC--CCCCEEEEEeecCCccccCHHHHHHhhhcCC-CccccCC
Q 013425 280 SLP-RP-PPSVPLILIGPGTGCAPFRGFVEERAIQSSSG--PAAPIIFFFGCRNEDDFLYRELWLSHSLNDG-VFSEAKG 354 (443)
Q Consensus 280 ~F~-lp-~~~~piImIa~GTGIAPfrs~lq~~~~~~~~~--~~~~~~L~~G~R~~~d~ly~~el~~~~~~~g-~l~~~~~ 354 (443)
.|. +| +...|+||||+|||||||++|++++......+ ..++++||||||+++|++|++||+++.+.++ ++
T Consensus 153 ~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~~~~~~~~~~~~v~L~~g~R~~~d~~~~~el~~l~~~~~~~~----- 227 (314)
T 1fnb_A 153 KEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPDNF----- 227 (314)
T ss_dssp STTCCBSCTTCEEEEEEEGGGGHHHHHHHHHHHTCCBTTBCCCSEEEEEEEESSGGGCCSHHHHHHHHHHCTTTE-----
T ss_pred CceeCCCCCCCCEEEEeCCccHHHHHHHHHHHHHhccccccCCCCEEEEEecCCHHHhhhHHHHHHHHHhCCCcE-----
Confidence 764 56 45789999999999999999999987643211 1268999999999999999999999988744 68
Q ss_pred CeEEEEEccCCC----CcccchhhHHHcHHHHHHhhc-CCCEEEEeCCCCchHHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 013425 355 GGFYVAFSRKQP----QKVYVQHKMLEQSQRIWNLLL-SKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLK 429 (443)
Q Consensus 355 ~~~~~a~Sr~~~----~k~yVqd~l~~~~~~l~~~l~-~~~~iyvCG~~~~M~~~V~~~L~~i~~~~~~~~~~~a~~~l~ 429 (443)
++++++||+++ .++|||+.|.+..+.+++.+. .++.||+|||+ .|+++|.++|.+++.+.+ . +|+++++
T Consensus 228 -~~~~~~s~~~~~~~g~~~~v~~~l~~~~~~~~~~~~~~~~~vyvCGp~-~m~~~v~~~L~~~~~~~g-~---~~~~~~~ 301 (314)
T 1fnb_A 228 -RLDFAVSREQTNEKGEKMYIQTRMAQYAVELWEMLKKDNTYVYMCGLK-GMEKGIDDIMVSLAAAEG-I---DWIEYKR 301 (314)
T ss_dssp -EEEEEETTTCBCTTCCBCCHHHHHHTTHHHHHHHTTSTTEEEEEEECT-THHHHHHHHHHHHHHTTT-C---CHHHHHH
T ss_pred -EEEEEECCCCcccCCCceechHHHHHhHHHHHHHHhcCCeEEEEECCH-HHHHHHHHHHHHHHHHhC-c---hHHHHHH
Confidence 89999999754 488999999988778877774 58899999998 999999999999988765 2 4788999
Q ss_pred HHHHcCCEEEeec
Q 013425 430 ALQRAGRYHVEAW 442 (443)
Q Consensus 430 ~l~~~~Ry~~dvW 442 (443)
+|+++|||+.|+|
T Consensus 302 ~l~~~~r~~~d~~ 314 (314)
T 1fnb_A 302 QLKKAEQWNVEVY 314 (314)
T ss_dssp HHHHTTCEEEEEC
T ss_pred HHHHCCcEEEecC
Confidence 9999999999999
No 10
>2bmw_A Ferredoxin--NADP reductase; oxidoreductase, flavoprotein, FAD, FNR, reductase reductase, phycobilisome, thylakoid; HET: FAD; 1.5A {Anabaena SP} SCOP: b.43.4.2 c.25.1.1 PDB: 1h42_A* 2vyq_A* 2vzl_A* 1ogi_A* 1ogj_A* 1gjr_A* 1e62_A* 1e64_A* 1quf_A* 1e63_A* 1go2_A* 1w34_A* 1b2r_A* 1w35_A* 1w87_A* 1que_A* 1ewy_A* 1gr1_A* 2bsa_A* 1bqe_A* ...
Probab=100.00 E-value=2.2e-39 Score=320.17 Aligned_cols=267 Identities=26% Similarity=0.478 Sum_probs=221.7
Q ss_pred Cccce-eEEEeeeecCCCCCCcEEEEEEEecCCCcccCCCCEEEEccCCCHHHHHHHHHHcCCCCCceEEEeeCCccCCC
Q 013425 43 AVCFL-KMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYL 121 (443)
Q Consensus 43 ~~~~~-~v~~~~~Lt~~~~~~~v~~i~l~~~~~~~~y~~GD~l~I~p~N~~~~V~~~l~~l~l~~~~~v~i~~~~~~~~~ 121 (443)
..+|. +|+++++|++.++.+++++++|++++..+.|+||+++.|.+++..
T Consensus 19 ~~~~~~~V~~~~~l~~~~~~~~v~~l~~~~~~~~~~~~pGQ~v~l~~~~~~----------------------------- 69 (304)
T 2bmw_A 19 NAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIPPGVD----------------------------- 69 (304)
T ss_dssp TBCEEEEEEEEEECSCTTCSSCEEEEEEECTTSCCCCCTTCEEEEECSSBC-----------------------------
T ss_pred CCCEEEEEEEEEEecCCCCCCcEEEEEEecCCCccccCCCCEEEEEcCCCc-----------------------------
Confidence 34566 999999999988899999999999855689999999999887621
Q ss_pred CccccCCCCCcchHHHHHHHccccCCCCCCHHHHHHHHHhccChhHHHHHHhhcCCCChHHHHHHHHhcCCCHHHHHhhC
Q 013425 122 PDIHKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTVLEVLEDF 201 (443)
Q Consensus 122 ~~~~~~~~~~~~tl~~ll~~~~Dl~~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~~~l~d~L~~f 201 (443)
. .+
T Consensus 70 --------~---------------~g------------------------------------------------------ 72 (304)
T 2bmw_A 70 --------K---------------NG------------------------------------------------------ 72 (304)
T ss_dssp --------T---------------TS------------------------------------------------------
T ss_pred --------c---------------cC------------------------------------------------------
Confidence 0 00
Q ss_pred CCCCCCHHHHHHhcCCCCcceeecCCCCCC---CCCeEEEEEEEEEecCCC-CcccCCcccccccCCCCCCCcEEEEEee
Q 013425 202 PSVQMPIDWLVQLVPPLKTRAFSISSSPLA---HPNQVHLTVSVVSWTTPY-KRKRTGLCSVWLAGLDPQQGIYIPAWFQ 277 (443)
Q Consensus 202 ~s~~~p~~~ll~~lp~~~pR~YSIaSsp~~---~~~~i~l~V~~v~~~~~~-~~~~~G~~S~~L~~l~~~~G~~v~i~~~ 277 (443)
.+..+|+|||+|+|.. .++.++|+|+++.|.++. +..+.|.||+||+++++ |+.|.+.+|
T Consensus 73 --------------~~~~~R~ySias~~~~~~~~~~~l~l~Vk~~~y~~~~~~~~~~G~~S~~L~~l~~--Gd~v~v~gP 136 (304)
T 2bmw_A 73 --------------KPEKLRLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEP--GSEVKITGP 136 (304)
T ss_dssp --------------CBCCCEEEEBCSCTTTTTTSSSEEEEEEECCEECSSSSSSCEECHHHHHHHTCCT--TCEEEEEEE
T ss_pred --------------CCCCCcceecCCCCcccCCCCCEEEEEEEEEEeeccccCcCCCcchhhHHhcCCC--CCEEEEEec
Confidence 0136899999999853 358999999988886543 33467999999999999 999999999
Q ss_pred cCCC-CCC-CCCCCeEEEeCCccchhHHHHHHHHHHhcC----CC--CCCCEEEEEeecCCccccCHHHHHHhhhcCC-C
Q 013425 278 KGSL-PRP-PPSVPLILIGPGTGCAPFRGFVEERAIQSS----SG--PAAPIIFFFGCRNEDDFLYRELWLSHSLNDG-V 348 (443)
Q Consensus 278 ~g~F-~lp-~~~~piImIa~GTGIAPfrs~lq~~~~~~~----~~--~~~~~~L~~G~R~~~d~ly~~el~~~~~~~g-~ 348 (443)
.|.| .+| +..+|+||||+|||||||++|++++..... .+ ..++++||||||+.+|++|.+||+++.+.++ +
T Consensus 137 ~G~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~~~~~~~~~~~~~~~~v~l~~g~r~~~d~~~~~el~~~~~~~~~~ 216 (304)
T 2bmw_A 137 VGKEMLLPDDPEANVIMLAGGTGITPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQKYPDN 216 (304)
T ss_dssp ECSSSCCCSCTTCEEEEEEEGGGHHHHHHHHHHHHCHHHHHHCTTCCCCSCEEEEEEESSGGGCTTHHHHHHHHHHCTTT
T ss_pred cCCceeCCCCCCCCEEEEecCccHHHHHHHHHHHHHhhhhhcccccccCCCEEEEEEeCChHhcchHHHHHHHHHhCCCc
Confidence 9975 466 567899999999999999999998765420 00 1268999999999889999999999988754 6
Q ss_pred ccccCCCeEEEEEccCCC----CcccchhhHHHcHHHHHHhhcC-CCEEEEeCCCCchHHHHHHHHHHHHHHhCCCCHHH
Q 013425 349 FSEAKGGGFYVAFSRKQP----QKVYVQHKMLEQSQRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDS 423 (443)
Q Consensus 349 l~~~~~~~~~~a~Sr~~~----~k~yVqd~l~~~~~~l~~~l~~-~~~iyvCG~~~~M~~~V~~~L~~i~~~~~~~~~~~ 423 (443)
+ ++++++||+++ .+.|||+.+.++.+.+++++.. ++.||+|||+ .|+++|+++|.+++.+.+ .+
T Consensus 217 ~------~~~~~~s~~~~~~~~~~~~v~~~l~~~~~~l~~~~~~~~~~vyvCGp~-~m~~~v~~~l~~~~~~~g-~~--- 285 (304)
T 2bmw_A 217 F------RLTYAISREQKNPQGGRMYIQDRVAEHADQLWQLIKNQKTHTYICGPP-PMEEGIDAALSAAAAKEG-VT--- 285 (304)
T ss_dssp E------EEEEEETTTCBCTTSSBCCHHHHHHHTHHHHHHHHTSTTEEEEEEECT-THHHHHHHHHHHHHHTTT-CC---
T ss_pred E------EEEEEEcCCCCCCCCCcceehHHHHHhHHHHHHHhhcCCcEEEEECCH-HHHHHHHHHHHHHHHHcC-cc---
Confidence 8 89999999853 4789999999888888877654 7899999998 999999999999988654 43
Q ss_pred HHHHHHHHHHcCCEEEeec
Q 013425 424 AANWLKALQRAGRYHVEAW 442 (443)
Q Consensus 424 a~~~l~~l~~~~Ry~~dvW 442 (443)
++.++++|+++|||+.|+|
T Consensus 286 ~~~~~~~m~~~~ry~~e~~ 304 (304)
T 2bmw_A 286 WSDYQKDLKKAGRWHVETY 304 (304)
T ss_dssp HHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHcCCeEEecC
Confidence 6789999999999999999
No 11
>3vo2_A Putative uncharacterized protein; rossmann fold, oxidoreductase, FAD binding; HET: FAD; 1.39A {Zea mays} PDB: 3vo1_A* 1gaw_A* 1gaq_A* 1qg0_A* 4af6_A* 1qga_A* 1qfz_A* 1qfy_A* 4af7_A* 1sm4_A* 3mhp_A* 1fnb_A* 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 2xnc_A*
Probab=100.00 E-value=7.9e-39 Score=317.56 Aligned_cols=272 Identities=25% Similarity=0.438 Sum_probs=228.0
Q ss_pred CCccccCccce-eEEEeeeecCCCCCCcEEEEEEEecCCCcccCCCCEEEEccCCCHHHHHHHHHHcCCCCCceEEEeeC
Q 013425 37 SNYNNKAVCFL-KMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHK 115 (443)
Q Consensus 37 ~~~~~~~~~~~-~v~~~~~Lt~~~~~~~v~~i~l~~~~~~~~y~~GD~l~I~p~N~~~~V~~~l~~l~l~~~~~v~i~~~ 115 (443)
.+......+|. +|++++.+++.+...++++|+|+.+ ..+.|+||.++.|.++..
T Consensus 25 ~~~~~p~~~~~~~V~~~~~l~~~~~~~~v~~l~l~~~-~~~~~~pGQ~v~l~~~~~------------------------ 79 (310)
T 3vo2_A 25 TNKYKPKEPYVGRCLSNTRITGDDAPGETWHMVFSTE-GEIPYREGQSIGIIADGE------------------------ 79 (310)
T ss_dssp CCSBBTTBCEEEEEEEEEECSCSSSSSCEEEEEEECT-TCCCCCTTCEEEEECSSB------------------------
T ss_pred eeeecCCCCEEEEEEEEEEccCCCCCccEEEEEEeCC-CCCcccCCCEEEEECCCc------------------------
Confidence 34444455677 9999999998777788999999976 568899999999865430
Q ss_pred CccCCCCccccCCCCCcchHHHHHHHccccCCCCCCHHHHHHHHHhccChhHHHHHHhhcCCCChHHHHHHHHhcCCCHH
Q 013425 116 EMKNYLPDIHKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTVL 195 (443)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~tl~~ll~~~~Dl~~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~~~l~ 195 (443)
+..+
T Consensus 80 ----------------------------~~~g------------------------------------------------ 83 (310)
T 3vo2_A 80 ----------------------------DKNG------------------------------------------------ 83 (310)
T ss_dssp ----------------------------CTTS------------------------------------------------
T ss_pred ----------------------------CCCC------------------------------------------------
Confidence 0001
Q ss_pred HHHhhCCCCCCCHHHHHHhcCCCCcceeecCCCCCC---CCCeEEEEEEEEEecCCCCcccCCcccccccCCCCCCCcEE
Q 013425 196 EVLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLA---HPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYI 272 (443)
Q Consensus 196 d~L~~f~s~~~p~~~ll~~lp~~~pR~YSIaSsp~~---~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~~~G~~v 272 (443)
.+..+|+|||+|+|.. .++.++|+|+++.|.+..++.+.|.||+||+++++ |+.|
T Consensus 84 --------------------~~~~~R~ySias~p~~~~~~~~~~~l~Vk~~~~~~~~~~~~~G~~S~~L~~l~~--Gd~v 141 (310)
T 3vo2_A 84 --------------------KPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNDQGEIVKGVCSNFLCDLKP--GADV 141 (310)
T ss_dssp --------------------CBCCCEEEECCSCTTTTTTSSSEEEEEEECCEEECTTSCEEECHHHHHHHTCCT--TCEE
T ss_pred --------------------CcCcceeeecCCCCcccCCCCCEEEEEEEEEEeccCCCCcCCcchhhHHhcCCC--CCEE
Confidence 1135899999999863 36899999999988877677778999999999999 9999
Q ss_pred EEEeecCCCC-CC-CCCCCeEEEeCCccchhHHHHHHHHHHhcCCC--CCCCEEEEEeecCCccccCHHHHHHhhhcCC-
Q 013425 273 PAWFQKGSLP-RP-PPSVPLILIGPGTGCAPFRGFVEERAIQSSSG--PAAPIIFFFGCRNEDDFLYRELWLSHSLNDG- 347 (443)
Q Consensus 273 ~i~~~~g~F~-lp-~~~~piImIa~GTGIAPfrs~lq~~~~~~~~~--~~~~~~L~~G~R~~~d~ly~~el~~~~~~~g- 347 (443)
.+.+|.|.|. +| +..+|+||||+|||||||++|++++..+.... ..++++||||||+.+|++|.+||+++.+.++
T Consensus 142 ~v~gP~G~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~~~~~~~~~~~~v~L~~g~r~~~d~~~~~el~~l~~~~~~ 221 (310)
T 3vo2_A 142 KITGPVGKEMLMPKDPNATVIMLATGTGIAPFRSFLWKMFLEEHEDYKFSGLAWLFLGVPTSDSLLYKEELEKMKEMAPD 221 (310)
T ss_dssp EEEEEECSTTCCBSCTTCEEEEEEEGGGGHHHHHHHHHHHSSCCTTCCCCSEEEEEEEESSGGGCCSHHHHHHHHHHCTT
T ss_pred EEEeccCCcccCCCCCCCCEEEEeCCcchhHHHHHHHHHHHhhcccccCCCcEEEEEEecChhhcccHHHHHHHHHhCCC
Confidence 9999999765 56 57789999999999999999999987543221 1268999999999999999999999998754
Q ss_pred CccccCCCeEEEEEccCCC----CcccchhhHHHcHHHHHHhhc-CCCEEEEeCCCCchHHHHHHHHHHHHHHhCCCCHH
Q 013425 348 VFSEAKGGGFYVAFSRKQP----QKVYVQHKMLEQSQRIWNLLL-SKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRD 422 (443)
Q Consensus 348 ~l~~~~~~~~~~a~Sr~~~----~k~yVqd~l~~~~~~l~~~l~-~~~~iyvCG~~~~M~~~V~~~L~~i~~~~~~~~~~ 422 (443)
++ ++++++||++. .++|||+.+.+..+.+++++. +++.||+|||+ .|.++|+++|.+++.+.+ .
T Consensus 222 ~~------~v~~~~sr~~~~~~g~~~~v~~~l~~~~~~l~~~l~~~~~~vyvCGp~-~M~~~v~~~L~~~~~~~g-~--- 290 (310)
T 3vo2_A 222 NF------RLDFAVSREQTNAAGEKMYIQTRMAEYREELWELLKKDNTYVYMCGLK-GMEKGIDDIMLNLAAKDG-I--- 290 (310)
T ss_dssp TE------EEEEEETTTCBCTTCCBCCHHHHHHTTHHHHHHHHTSTTEEEEEEEST-THHHHHHHHHHHHHHHTT-C---
T ss_pred CE------EEEEEECCCCCCCCCcceehHHHHHHHHHHHHHhcccCCcEEEEeCCH-HHHHHHHHHHHHHHHHcC-c---
Confidence 78 89999999864 588999999998888888876 48999999998 999999999999998764 3
Q ss_pred HHHHHHHHHHHcCCEEEeec
Q 013425 423 SAANWLKALQRAGRYHVEAW 442 (443)
Q Consensus 423 ~a~~~l~~l~~~~Ry~~dvW 442 (443)
++++|+++|+++|||++|+|
T Consensus 291 ~~~~~~~~l~~~~r~~~e~y 310 (310)
T 3vo2_A 291 DWMQYKKQLKKGEQWNVEVY 310 (310)
T ss_dssp CHHHHHHHHHHTTSEEEEEC
T ss_pred CHHHHHHHHHHCCceEEecC
Confidence 57889999999999999999
No 12
>2b5o_A FNR, ferredoxin--NADP reductase; complex with FAD, oxidoreductase; HET: FAD; 2.50A {Synechococcus SP}
Probab=100.00 E-value=7.1e-38 Score=321.61 Aligned_cols=265 Identities=25% Similarity=0.427 Sum_probs=222.5
Q ss_pred cce-eEEEeeeecCCCCCCcEEEEEEEecCCCcccCCCCEEEEccCCCHHHHHHHHHHcCCCCCceEEEeeCCccCCCCc
Q 013425 45 CFL-KMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLPD 123 (443)
Q Consensus 45 ~~~-~v~~~~~Lt~~~~~~~v~~i~l~~~~~~~~y~~GD~l~I~p~N~~~~V~~~l~~l~l~~~~~v~i~~~~~~~~~~~ 123 (443)
.|. +|++++++++.++.+++++|+|+.++....|+||+++.|.+++..
T Consensus 122 ~~~~~V~~~~~lt~~~~~~~v~~l~l~~~~~~~~~~pGQ~v~l~~~~~~------------------------------- 170 (402)
T 2b5o_A 122 PFLGKCIENYELVDEGGSGTVRHVTFDISEGDLRYLEGQSIGIIPPGED------------------------------- 170 (402)
T ss_dssp CEEEEEEEEEECSCTTCCSCEEEEEEECTTSCCCCCTTCEEEEECSSEE-------------------------------
T ss_pred CEEEEEEEEEEcCCCCCCCcEEEEEEECCCCCCCcCCCCEEEEEecCCC-------------------------------
Confidence 466 999999999888888999999998854589999999999876520
Q ss_pred cccCCCCCcchHHHHHHHccccCCCCCCHHHHHHHHHhccChhHHHHHHhhcCCCChHHHHHHHHhcCCCHHHHHhhCCC
Q 013425 124 IHKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTVLEVLEDFPS 203 (443)
Q Consensus 124 ~~~~~~~~~~tl~~ll~~~~Dl~~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~~~l~d~L~~f~s 203 (443)
..+
T Consensus 171 ---------------------~~g-------------------------------------------------------- 173 (402)
T 2b5o_A 171 ---------------------KNG-------------------------------------------------------- 173 (402)
T ss_dssp ---------------------TTT--------------------------------------------------------
T ss_pred ---------------------cCC--------------------------------------------------------
Confidence 000
Q ss_pred CCCCHHHHHHhcCCCCcceeecCCCCCC---CCCeEEEEEEEEEecCCC-CcccCCcccccccCCCCCCC-cEEEEEeec
Q 013425 204 VQMPIDWLVQLVPPLKTRAFSISSSPLA---HPNQVHLTVSVVSWTTPY-KRKRTGLCSVWLAGLDPQQG-IYIPAWFQK 278 (443)
Q Consensus 204 ~~~p~~~ll~~lp~~~pR~YSIaSsp~~---~~~~i~l~V~~v~~~~~~-~~~~~G~~S~~L~~l~~~~G-~~v~i~~~~ 278 (443)
.+..+|+|||+|+|.. .++.++|+|+++.|.++. +..+.|.||+||+++++ | +.|.+.+|.
T Consensus 174 ------------~~~~~R~ySIas~p~~~~~~~~~l~l~Vk~~~y~~~~~~~~~~G~~S~~L~~l~~--G~d~v~v~gP~ 239 (402)
T 2b5o_A 174 ------------KPHKLRLYSIASTRHGDMEDNKTVSLCVRQLEYQDPESGETVYGVCSTYLCNLPV--GTDDVKITGPV 239 (402)
T ss_dssp ------------EECCCEEEEBCSCTTTTTTSSCEEEEEEECCEEECTTTCCEEECHHHHHHHTCCT--TCCCEEEEEEE
T ss_pred ------------CccCceeeeccCCCccccCCCCEEEEEEEEeeecccccCcCCCCchhHHHhhCCC--CCceEEEEccc
Confidence 0136899999999863 258999999988886532 33468999999999999 9 999999999
Q ss_pred CCC-CCC-CCCCCeEEEeCCccchhHHHHHHHHHHhcCCC--CCCCEEEEEeecCCccccCHHHHHHhhhcCC-CccccC
Q 013425 279 GSL-PRP-PPSVPLILIGPGTGCAPFRGFVEERAIQSSSG--PAAPIIFFFGCRNEDDFLYRELWLSHSLNDG-VFSEAK 353 (443)
Q Consensus 279 g~F-~lp-~~~~piImIa~GTGIAPfrs~lq~~~~~~~~~--~~~~~~L~~G~R~~~d~ly~~el~~~~~~~g-~l~~~~ 353 (443)
|.| .+| +..+|+||||+|||||||++|++++......+ ..++++||||||+.+|++|++||+++.+.++ ++
T Consensus 240 G~~~~l~~~~~~~vvlIAgGtGIaP~~s~l~~l~~~~~~~~~~~~~v~L~~g~R~~~d~~~~~eL~~l~~~~~~~~---- 315 (402)
T 2b5o_A 240 GKEMLLPDDEDATVVMLATGTGIAPFRAFLWRMFKEQHEDYKFKGKAWLIFGVPYTANILYKDDFEKMAAENPDNF---- 315 (402)
T ss_dssp CSTTCCCSCTTCEEEEEEEGGGGHHHHHHHHHHHTCCCSSCCCCSEEEEEEEESSGGGCTTHHHHHHHHHHCTTTE----
T ss_pred CCcccCCccCCCCEEEEEcccCHHHHHHHHHHHHHhccccccccCCEEEEEecCCHHHhHHHHHHHHHHHhCCCcE----
Confidence 976 566 56789999999999999999999987653211 1268999999999999999999999988755 78
Q ss_pred CCeEEEEEccCCC----CcccchhhHHHcHHHHHHhhc-CCCEEEEeCCCCchHHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 013425 354 GGGFYVAFSRKQP----QKVYVQHKMLEQSQRIWNLLL-SKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWL 428 (443)
Q Consensus 354 ~~~~~~a~Sr~~~----~k~yVqd~l~~~~~~l~~~l~-~~~~iyvCG~~~~M~~~V~~~L~~i~~~~~~~~~~~a~~~l 428 (443)
++++++||+++ .++|||+.|.+..+.+++++. .+++||+|||+ .|.++|.++|.+++.+.+. .+++++
T Consensus 316 --~v~~~~S~~~~~~~g~~~~v~~~l~~~~~~l~~~l~~~~~~vyvCGP~-~M~~~v~~~L~~~g~~~g~----~~~~~~ 388 (402)
T 2b5o_A 316 --RLTYAISREQKTADGGKVYVQSRVSEYADELFEMIQKPNTHVYMCGLK-GMQPPIDETFTAEAEKRGL----NWEEMR 388 (402)
T ss_dssp --EEEEEETTTCBCTTSCBCCHHHHHHHTHHHHHHHHTSTTEEEEEEECG-GGHHHHHHHHHHHHHHTTC----CHHHHH
T ss_pred --EEEEEECCCCcccCCCccchHHHHHHhHHHHHHHhccCCcEEEEECCH-HHHHHHHHHHHHHHHHcCc----hHHHHH
Confidence 89999999753 478999999998888888875 48899999998 9999999999999988753 478899
Q ss_pred HHHHHcCCEEEeec
Q 013425 429 KALQRAGRYHVEAW 442 (443)
Q Consensus 429 ~~l~~~~Ry~~dvW 442 (443)
++|+++|||++|+|
T Consensus 389 ~~m~~~~Ry~~e~~ 402 (402)
T 2b5o_A 389 RSMKKEHRWHVEVY 402 (402)
T ss_dssp HHHHHTTCEEEEEC
T ss_pred HHHHHCCCEEEecC
Confidence 99999999999999
No 13
>2rc5_A Ferredoxin-NADP reductase; FAD, oxidoreductase; HET: FAD; 2.43A {Leptospira interrogans} PDB: 2rc6_A*
Probab=100.00 E-value=5.5e-37 Score=304.49 Aligned_cols=211 Identities=20% Similarity=0.341 Sum_probs=173.4
Q ss_pred CCcceeecCCCCCC---CCCeEEEEEEEEEecCCCCcc-cCCcccccccCCCCCCCcEEEEEeecCCCC-CCC--CCCCe
Q 013425 218 LKTRAFSISSSPLA---HPNQVHLTVSVVSWTTPYKRK-RTGLCSVWLAGLDPQQGIYIPAWFQKGSLP-RPP--PSVPL 290 (443)
Q Consensus 218 ~~pR~YSIaSsp~~---~~~~i~l~V~~v~~~~~~~~~-~~G~~S~~L~~l~~~~G~~v~i~~~~g~F~-lp~--~~~pi 290 (443)
+.+|+|||+|+|.. .++.++|+|+++.|.+..+.. +.|.+|+||+++++ |+.|.+.+|.|.|. +|. ..+|+
T Consensus 91 ~~~R~ySi~s~p~~~~~~~~~l~l~vk~~~~~~~~g~~~~~G~~S~~L~~l~~--Gd~v~v~gP~G~~~~~~~~~~~~~~ 168 (314)
T 2rc5_A 91 YTVRLYSIASPSYSFGMKEDNIEFIIKRDNIYDENGNIQFKGVCSNYMCDLKP--GDEVTMTGPSGKKFLLPNTDFSGDI 168 (314)
T ss_dssp CCCEEEECCSCTTCGGGCCCEEEEEEECCBCC--CCSCSSBCHHHHHHHTCCT--TCEEEEEEEECSSSCCCSSCBCSCE
T ss_pred CCceeeeccCCccccCCCCCEEEEEEEEEeecCCCCCcCCCcchHHHHhcCCC--cCEEEEEeccCCceeCCCCCCCCCE
Confidence 67899999999852 368999999988776544433 57999999999999 99999999999865 453 57899
Q ss_pred EEEeCCccchhHHHHHHHHHHhcCCCCCCCEEEEEeecCCccccCHHHHHHhhhcCCCccccCCCeEEEEEccCCC----
Q 013425 291 ILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQP---- 366 (443)
Q Consensus 291 ImIa~GTGIAPfrs~lq~~~~~~~~~~~~~~~L~~G~R~~~d~ly~~el~~~~~~~g~l~~~~~~~~~~a~Sr~~~---- 366 (443)
||||+|||||||++|++++......+..++++||||||+++|++|++||+++.+.++++ ++++++||+++
T Consensus 169 vlIagGtGIaP~~s~l~~l~~~~~~~~~~~v~l~~g~r~~~d~~~~~el~~l~~~~~~~------~~~~~~s~~~~~~~~ 242 (314)
T 2rc5_A 169 MFLATGTGIAPFIGMSEELLEHKLIKFTGNITLVYGAPYSDELVMMDYLKGLESKHKNF------KLITAISREEKNSFD 242 (314)
T ss_dssp EEEEEGGGGHHHHHHHHHHHTTCSSCBCSCEEEEEEESSGGGSCSHHHHHHHHHHHSSE------EEEEEETTTCBCTTT
T ss_pred EEEECCccHHHHHHHHHHHHHhcccCCCCcEEEEEEeCCHHHHhHHHHHHHHHHhCCcE------EEEEEECCCCCcccC
Confidence 99999999999999999987653211126899999999999999999999998765678 99999999743
Q ss_pred -CcccchhhHHHcHHHHHHhhcCCCEEEEe-CCCCchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCEEEeec
Q 013425 367 -QKVYVQHKMLEQSQRIWNLLLSKASIYVA-GSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAW 442 (443)
Q Consensus 367 -~k~yVqd~l~~~~~~l~~~l~~~~~iyvC-G~~~~M~~~V~~~L~~i~~~~~~~~~~~a~~~l~~l~~~~Ry~~dvW 442 (443)
.++|||+.|.+..+.+++.+.++..+|+| ||+ .|+++|++.|.++.. .+ ..++.|+.+|+++|||+.|+|
T Consensus 243 g~~~~v~~~l~~~~~~l~~~~~~~~~~yvCGGp~-~m~~~v~~~L~~~g~--~~---i~~e~f~~~l~~~gr~~~e~~ 314 (314)
T 2rc5_A 243 GGRMYISHRVREQAEAVKKILNGGGRFYICGGPK-GMEKGVIEEIQKISG--NT---GTYEEFKHHLEGAHQLFVETY 314 (314)
T ss_dssp SSBCCHHHHHHHTHHHHHHHHHHTCEEEEEESST-TTHHHHHHHHHHHHT--CC---SCHHHHHHHHHHTTCEEEEEC
T ss_pred CCceehhHHHHHhHHHHHHHhhcCCeEEEeCCcH-HHHHHHHHHHHHHHh--cc---chHHHHHHHHHHCCCEEEecC
Confidence 47899999998877777766433344999 887 999999999999865 22 346789999999999999999
No 14
>3lo8_A Ferredoxin--NADP reductase; electron transport, oxidoreductase, FAD, flavoprotein; HET: FAD; 1.05A {Zea mays} PDB: 3lvb_A* 1jb9_A*
Probab=100.00 E-value=6.9e-37 Score=303.37 Aligned_cols=224 Identities=29% Similarity=0.431 Sum_probs=187.6
Q ss_pred CCHHHHHHhcCC---------CCcceeecCCCCCC---CCCeEEEEEEEEEecCCCC----cccCCcccccccCCCCCCC
Q 013425 206 MPIDWLVQLVPP---------LKTRAFSISSSPLA---HPNQVHLTVSVVSWTTPYK----RKRTGLCSVWLAGLDPQQG 269 (443)
Q Consensus 206 ~p~~~ll~~lp~---------~~pR~YSIaSsp~~---~~~~i~l~V~~v~~~~~~~----~~~~G~~S~~L~~l~~~~G 269 (443)
.|||++...+|. ..+|+|||+|+|.. +++.++|+|+++.|..+.. ..+.|.+|+||+++++ |
T Consensus 62 ~pGQ~v~l~~~~~~~~~~g~~~~~R~ySias~p~~~~~~~~~~~l~Vk~~~~~~~~~~~~~~~~~G~~S~~L~~l~~--G 139 (311)
T 3lo8_A 62 WEGQSYGVIPPGENPKKPGAPQNVRLYSIASTRYGDNFDGRTGSLCVRRAVYYDPETGKEDPSKNGVCSNFLCNSKP--G 139 (311)
T ss_dssp CTTCEEEEECSSBCTTSTTCBCCCEEEEBCSCTTTTTTSSSEEEEEEECCCCCCTTTCCCCGGGSCHHHHHHHTCCT--T
T ss_pred cCCCEEEEeCCCCccccCCCCCCceeeEecCCCcccCCCCCEEEEEEEEEEecccccCcCCcCCCCchhhHHhcCCC--c
Confidence 588887777765 36899999999964 2589999998765543321 1367999999999999 9
Q ss_pred cEEEEEeecCCCCC-C--CCCCCeEEEeCCccchhHHHHHHHHHHhcCCC--CCCCEEEEEeecCCccccCHHHHHHhhh
Q 013425 270 IYIPAWFQKGSLPR-P--PPSVPLILIGPGTGCAPFRGFVEERAIQSSSG--PAAPIIFFFGCRNEDDFLYRELWLSHSL 344 (443)
Q Consensus 270 ~~v~i~~~~g~F~l-p--~~~~piImIa~GTGIAPfrs~lq~~~~~~~~~--~~~~~~L~~G~R~~~d~ly~~el~~~~~ 344 (443)
+.|.+.+|.|.|.+ | +...|+||||+|||||||++|++++..+...+ ..++++||||||+.+|++|.+||+++.+
T Consensus 140 d~v~v~gP~G~~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~~~~~~~~~~~~v~l~~g~r~~~d~~~~~el~~l~~ 219 (311)
T 3lo8_A 140 DKIQLTGPSGKIMLLPEEDPNATHIMIATGTGVAPFRGYLRRMFMEDVPNYRFGGLAWLFLGVANSDSLLYDEEFTSYLK 219 (311)
T ss_dssp CEEEEEEEECCTTCCCCSCTTCEEEEEEEGGGGHHHHHHHHHHHTEECTTCCCCSEEEEEEEESSGGGCSSHHHHHHHHH
T ss_pred CEEEEEeccCCcccCCCcCCCCCEEEEECCEEHHHHHHHHHHHHHhccccccCCCCEEEEEecCChHHhhHHHHHHHHHH
Confidence 99999999998765 4 26789999999999999999999987654311 1267999999999999999999999998
Q ss_pred cCC-CccccCCCeEEEEEccCCC----CcccchhhHHHcHHHHHHhhcCCCEEEEeCCCCchHHHHHHHHHHHHHHhCCC
Q 013425 345 NDG-VFSEAKGGGFYVAFSRKQP----QKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEA 419 (443)
Q Consensus 345 ~~g-~l~~~~~~~~~~a~Sr~~~----~k~yVqd~l~~~~~~l~~~l~~~~~iyvCG~~~~M~~~V~~~L~~i~~~~~~~ 419 (443)
.++ ++ +++.++||++. .++|||+.+.+..+.+++++..++.||+|||+ .|+++|+++|.+++.+.+
T Consensus 220 ~~~~~~------~~~~~~s~~~~~~~g~~~~v~~~l~~~~~~~~~~~~~~~~vyvCGp~-~m~~~v~~~L~~~~~~~g-- 290 (311)
T 3lo8_A 220 QYPDNF------RYDKALSREQKNRSGGKMYVQDKIEEYSDEIFKLLDGGAHIYFCGLK-GMMPGIQDTLKKVAERRG-- 290 (311)
T ss_dssp HCTTTE------EEEEEETTTC-------CCHHHHHHHTHHHHHHHHHTTCEEEEEECG-GGHHHHHHHHHHHHHHTT--
T ss_pred hCCCcE------EEEEEECCCCcccCCCcceehHHHHHHHHHHHHhhcCCcEEEEECCH-HHHHHHHHHHHHHHHhcc--
Confidence 754 78 89999999864 48999999999888888877779999999998 999999999999998765
Q ss_pred CHHHHHHHHHHHHHcCCEEEeec
Q 013425 420 SRDSAANWLKALQRAGRYHVEAW 442 (443)
Q Consensus 420 ~~~~a~~~l~~l~~~~Ry~~dvW 442 (443)
++|++|+++|+++|||++|+|
T Consensus 291 --~~~~~~~~~l~~~~ry~~e~y 311 (311)
T 3lo8_A 291 --ESWDQKLAQLKKNKQWHVEVY 311 (311)
T ss_dssp --CCHHHHHHHHHHTTCEEEEEC
T ss_pred --HHHHHHHHHHHHCCcEEEecC
Confidence 367899999999999999999
No 15
>3jqq_A Ferredoxin NADP reductase; FAD, oxidoreductase; HET: FAD A2P; 2.20A {Plasmodium falciparum} PDB: 2ok8_A* 2ok7_A* 3jqr_A* 3jqp_A*
Probab=100.00 E-value=1.8e-35 Score=294.44 Aligned_cols=291 Identities=19% Similarity=0.281 Sum_probs=213.7
Q ss_pred CCCccccCccce-eEEEeeeecCCCCCCcEEEEEEEecCCCcccCCCCEEEEccCCCHHHHHHHHHHcCCCCCceEEEee
Q 013425 36 LSNYNNKAVCFL-KMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQH 114 (443)
Q Consensus 36 ~~~~~~~~~~~~-~v~~~~~Lt~~~~~~~v~~i~l~~~~~~~~y~~GD~l~I~p~N~~~~V~~~l~~l~l~~~~~v~i~~ 114 (443)
.-|..+..++|. +|+++++|+.++...+|+||+|+.+ ..+.|.+|.+++|.|+..+.. .+
T Consensus 6 ~~~~~~~~~p~~~~v~~~~~l~~~~~~~~v~~~~~~~~-~~~~~~~GQ~~~i~~~~~~~~------------------~~ 66 (316)
T 3jqq_A 6 FINLYTVKNPLKCKIVDKINLVRPNSPNEVYHLEINHN-GLFKYLEGHTCGIIPYYNELD------------------NN 66 (316)
T ss_dssp CBTSSCSSSCEEEEEEEEEECSCTTCSCCEEEEEEECT-TCCCCCTTCEEEECTTCC-----------------------
T ss_pred ceeeecCCCCEEEEEEeeEEccCCCCCCceEEEEEeCC-CCcceecCcEeEEECCCcccc------------------cc
Confidence 467788888999 9999999999888899999999997 579999999999999875422 00
Q ss_pred CCccCCCCccccCCCCCcchHHHHHHHccccCCCCCCHHHHHHHHHhccChhHHHHHHhhcCCCChHHHHHHHHhcCCCH
Q 013425 115 KEMKNYLPDIHKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTV 194 (443)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~tl~~ll~~~~Dl~~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~~~l 194 (443)
.+.....|. .++-++. . + .+..+
T Consensus 67 ~~~~~~~~~-----------------~~~~~~~-----~--------~---------------------------~h~~~ 89 (316)
T 3jqq_A 67 PNNQINKDH-----------------NIINTTN-----H--------T---------------------------NHNNI 89 (316)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccc-----------------ccccccc-----c--------c---------------------------ccccc
Confidence 000000000 0010000 0 0 00000
Q ss_pred HHHHhhCCCCCCCHHHHHHhcCCCCcceeecCCCCCCCCCeEEEEEEEEEecCC---CCcccCCcccccccCCCCCCCcE
Q 013425 195 LEVLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTP---YKRKRTGLCSVWLAGLDPQQGIY 271 (443)
Q Consensus 195 ~d~L~~f~s~~~p~~~ll~~lp~~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~---~~~~~~G~~S~~L~~l~~~~G~~ 271 (443)
+ . ...-+...+|+|||+|+|.. +.++|+|+++.|.+. .++.+.|.||+||+++++ |+.
T Consensus 90 ~---------~------~~~~g~~~~R~ySIaS~p~~--~~l~l~Vk~~~y~~~~~~~~~~~~G~~S~~L~~l~~--Gd~ 150 (316)
T 3jqq_A 90 A---------L------SHIKKQRCARLYSISSSNNM--ENLSVAIKIHKYEQTENAPNITNYGYCSGFIKNLKI--NDD 150 (316)
T ss_dssp ----------------------CCCCEEEEBCSCTTS--SSEEEEEECCBC---------CCBCHHHHHHHTCCT--TCE
T ss_pred c---------c------ccCCCcccceeeecccCCCC--CeEEEEEEEEEecccccccCcCCCCchhHHHhhCCC--CCE
Confidence 0 0 00114468999999999964 789999998877643 234578999999999999 999
Q ss_pred EEEEeecCCCCCC-C---CCCCeEEEeCCccchhHHHHHHHHHHhcCC-------CCCCCEEEEEeecCCccccCHHHHH
Q 013425 272 IPAWFQKGSLPRP-P---PSVPLILIGPGTGCAPFRGFVEERAIQSSS-------GPAAPIIFFFGCRNEDDFLYRELWL 340 (443)
Q Consensus 272 v~i~~~~g~F~lp-~---~~~piImIa~GTGIAPfrs~lq~~~~~~~~-------~~~~~~~L~~G~R~~~d~ly~~el~ 340 (443)
|.+.+|.|.|.+| + ..+|+||||+|||||||+||++++...... ...++++||||||+++|++|.+||+
T Consensus 151 v~v~gP~G~f~l~~~~~~~~~~vvlIAgGtGIaP~~sil~~l~~~~~~~~~~~~~~~~~~v~L~~g~R~~~d~~~~~eL~ 230 (316)
T 3jqq_A 151 IYLTGAHGYFNLPNDAIQKNTNFIFIATGTGISPYISFLKKLFAYDKNNLYNRNSNYTGYITIYYGVYNEDSILYLNELE 230 (316)
T ss_dssp EEEEEEECCCCCCTTHHHHTCCEEEEEEGGGGHHHHHHHHHHTTCCGGGTTCCCCCCCCCEEEEEEESSGGGCTTHHHHH
T ss_pred EEEEecCCceEcCCcccCCCCcEEEEeCCceechHHHHHHHHHHhccccccccccCCCCcEEEEEEecCHHHhhcHHHHH
Confidence 9999999999998 4 379999999999999999999998865310 0237899999999999999999999
Q ss_pred HhhhcCC-CccccCCCeEEEEEccCCC---CcccchhhHHHcHHHHHHhhc-CCCEEEEeCCCCchHHHHHHHHHHHHHH
Q 013425 341 SHSLNDG-VFSEAKGGGFYVAFSRKQP---QKVYVQHKMLEQSQRIWNLLL-SKASIYVAGSATKMPSDVWSTFEEIVSK 415 (443)
Q Consensus 341 ~~~~~~g-~l~~~~~~~~~~a~Sr~~~---~k~yVqd~l~~~~~~l~~~l~-~~~~iyvCG~~~~M~~~V~~~L~~i~~~ 415 (443)
++.+.++ ++ +++.++||++. .++|||+.+.+..+.+++++. .++.||+|||+ .|.++++++|.+.
T Consensus 231 ~l~~~~~~~~------~~~~~~s~~~~~~g~~g~V~~~l~~~~~~~~~~l~~~~~~vyvCGP~-~m~~~v~~~l~~~--- 300 (316)
T 3jqq_A 231 YFQKMYPNNI------NIHYVFSYKQNSDATSFYVQDEIYKRKTEFLNLFNNYKCELYICGKK-SIRYKVMDILKSH--- 300 (316)
T ss_dssp HHHHHCTTTE------EEEEEEGGGCC---CBCCHHHHHHHTHHHHHHHHHHTCCEEEEEECS-THHHHHHHHHHC----
T ss_pred HHHHhCCCcE------EEEEEECCCcccCCCccchhHHHHHhHHHHHHhhccCCeEEEEeCCH-HHHHHHHHHHHHc---
Confidence 9988754 78 89999999854 589999999998888888775 48999999998 9999888766654
Q ss_pred hCCCCHHHHHHHHHHHHHcCCEEEeec
Q 013425 416 EGEASRDSAANWLKALQRAGRYHVEAW 442 (443)
Q Consensus 416 ~~~~~~~~a~~~l~~l~~~~Ry~~dvW 442 (443)
++++. ...+|++.|+|
T Consensus 301 -G~~~~----------v~~~rih~E~f 316 (316)
T 3jqq_A 301 -DQFDE----------KKKKRVHVEVY 316 (316)
T ss_dssp ----CH----------HHHTTEEEEEC
T ss_pred -CCCcc----------cccccEEEEeC
Confidence 33322 34578999876
No 16
>1tvc_A Methane monooxygenase component C, methane monooxygenase; FAD-binding, NADH-binding, oxidoreductase; HET: FDA; NMR {Methylococcus capsulatus} SCOP: b.43.4.2 c.25.1.2
Probab=99.95 E-value=5.4e-28 Score=231.86 Aligned_cols=180 Identities=15% Similarity=0.168 Sum_probs=150.7
Q ss_pred CCHHHHHHhcCC-CCcceeecCCCCCCCCCeEEEEEEEEEecCCCCcccCCccccccc-CCCCCCCcEEEEEeecCCCCC
Q 013425 206 MPIDWLVQLVPP-LKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLA-GLDPQQGIYIPAWFQKGSLPR 283 (443)
Q Consensus 206 ~p~~~ll~~lp~-~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~-~l~~~~G~~v~i~~~~g~F~l 283 (443)
.|+|++...+|. ...|+|||+|+|.. .+.++|+|+ ....|.+|+||. ++++ |+.|.+.+|.|.|.+
T Consensus 45 ~pGQ~v~l~~~~~~~~R~ySi~s~~~~-~~~l~i~vk---------~~~~G~~s~~l~~~l~~--Gd~v~v~gP~G~~~~ 112 (250)
T 1tvc_A 45 EPGQFMDLTIPGTDVSRSYSPANLPNP-EGRLEFLIR---------VLPEGRFSDYLRNDARV--GQVLSVKGPLGVFGL 112 (250)
T ss_dssp CSCCEEEECTTSCSSSEEECCBCCSSS-SCCEEEEEC---------CCTTSSSHHHHHHHSSS--SSEEEEEEEECCCSC
T ss_pred CCCcEEEEEeCCCccccccccCCCCCC-CCeEEEEEE---------ECCCCCchHHHHhcCCC--CCEEEEEcCcccccc
Confidence 588887777776 57899999999863 588999993 345699999995 8999 999999999999998
Q ss_pred C-CCCCCeEEEeCCccchhHHHHHHHHHHhcCCCCCCCEEEEEeecCCccccCHHHHHHhhhcCCCccccCCCeEEEEEc
Q 013425 284 P-PPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFS 362 (443)
Q Consensus 284 p-~~~~piImIa~GTGIAPfrs~lq~~~~~~~~~~~~~~~L~~G~R~~~d~ly~~el~~~~~~~g~l~~~~~~~~~~a~S 362 (443)
+ +...+++|||+|||||||++++++....... .+++|+||+|+.+|++|.+||+++.+.++++ +++.++|
T Consensus 113 ~~~~~~~~vliagGtGiaP~~~~l~~l~~~~~~---~~v~l~~~~r~~~~~~~~~el~~l~~~~~~~------~~~~~~s 183 (250)
T 1tvc_A 113 KERGMAPRYFVAGGTGLAPVVSMVRQMQEWTAP---NETRIYFGVNTEPELFYIDELKSLERSMRNL------TVKACVW 183 (250)
T ss_dssp CCCSSSCEEEEEESSTTHHHHHHHHHHHHHTCC---SCEEEEEECSSSTTCCCHHHHHHHHHHSSSC------EEEECCS
T ss_pred CccCCceEEEEEeccCHHHHHHHHHHHHhcCCC---ceEEEEEEeCCHHHhhhHHHHHHHHHhCCCe------EEEEEec
Confidence 8 5558999999999999999999999876543 7899999999999999999999998765788 8999999
Q ss_pred cCCC----CcccchhhHHHcHHHHHHhhcCCCEEEEeCCCCchHHHHHHHHHH
Q 013425 363 RKQP----QKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEE 411 (443)
Q Consensus 363 r~~~----~k~yVqd~l~~~~~~l~~~l~~~~~iyvCG~~~~M~~~V~~~L~~ 411 (443)
|+++ .++||++.+.+.. .+. ..++.+|+|||+ .|.++|++.|.+
T Consensus 184 ~~~~~~~g~~g~v~~~l~~~~---~~~-~~~~~vyvCGp~-~m~~~v~~~l~~ 231 (250)
T 1tvc_A 184 HPSGDWEGEQGSPIDALREDL---ESS-DANPDIYLCGPP-GMIDAACELVRS 231 (250)
T ss_dssp SCSSCCSSSSSSSSHHHHHHH---HHS-SSSSEEEEESSH-HHHHHHHHHHHH
T ss_pred cCCCCcCCccceehHHHHhhh---hcc-cCCcEEEEeCCH-HHHHHHHHHHHH
Confidence 8643 4789998876432 221 247899999998 999999987764
No 17
>2r6h_A NADH:ubiquinone oxidoreductase, Na translocating, subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: FAD; 2.95A {Porphyromonas gingivalis}
Probab=99.95 E-value=1e-27 Score=234.66 Aligned_cols=181 Identities=19% Similarity=0.333 Sum_probs=143.2
Q ss_pred CCcceeecCCCCCCCCCeEEEEEEEEEec--CC----CCcccCCcccccccCCCCCCCcEEEEEeecCCCCCCCCCCCeE
Q 013425 218 LKTRAFSISSSPLAHPNQVHLTVSVVSWT--TP----YKRKRTGLCSVWLAGLDPQQGIYIPAWFQKGSLPRPPPSVPLI 291 (443)
Q Consensus 218 ~~pR~YSIaSsp~~~~~~i~l~V~~v~~~--~~----~~~~~~G~~S~~L~~l~~~~G~~v~i~~~~g~F~lp~~~~piI 291 (443)
..+|+|||+|+|.. .+.++|+|+++... +. .++.+.|.+|+||.++++ |+.|.+.+|.|.|.+++..+|+|
T Consensus 84 ~~~R~ySi~s~~~~-~~~l~l~v~~~~~~~~~~~~~~~~~~~~G~~S~~l~~l~~--Gd~v~v~gP~G~f~~~~~~~~~v 160 (290)
T 2r6h_A 84 ETVRAYSMANYPAE-GNIITLNVRIATPPFDRAANKWKAGIKPGISSSYIFSLKP--GDKVMMSGPYGDFHIQDTDAEML 160 (290)
T ss_dssp CEEEEEECCSCTTC-CSEEEEEEECCCCCEETTTTEECTTCCCCHHHHHHTTCCT--TCEEEEEEEECCCCCCSSSCEEE
T ss_pred CcceeeeccCCCCC-CCEEEEEEEEeccccccccccccccCCCcchhhHHhcCCC--CCEEEEEecccCCcCCCCCCeEE
Confidence 46899999999864 57899999764211 10 012457999999999999 99999999999999886678999
Q ss_pred EEeCCccchhHHHHHHHHHHhcCCCCCCCEEEEEeecCCccccCHHHHHHhhhcCCCccccCCCeEEEEEccCCC-----
Q 013425 292 LIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQP----- 366 (443)
Q Consensus 292 mIa~GTGIAPfrs~lq~~~~~~~~~~~~~~~L~~G~R~~~d~ly~~el~~~~~~~g~l~~~~~~~~~~a~Sr~~~----- 366 (443)
|||+|||||||++|++++...... ..+++||||+|+.+|++|++||+++.+.++++ ++++++||++.
T Consensus 161 liagGtGitP~~s~l~~~~~~~~~--~~~v~l~~~~r~~~d~~~~~el~~l~~~~~~~------~~~~~~s~~~~~~~~~ 232 (290)
T 2r6h_A 161 YIGGGAGMAPLRAQILHLFRTLKT--GRKVSYWYGARSKNEIFYEEDFREIEREFPNF------KFHIALSDPQPEDNWT 232 (290)
T ss_dssp EEEEGGGHHHHHHHHHHHHHTSCC--CSCEEEEEEESSGGGCCSHHHHHHHHHHCTTE------EEEEEESSCCGGGCCC
T ss_pred EEECccCHHHHHHHHHHHHHhcCC--CCcEEEEEEcCCHHHHHHHHHHHHHHHhCCCe------EEEEEEccCCcccCCC
Confidence 999999999999999988765321 27899999999999999999999998766778 89999998642
Q ss_pred -CcccchhhHHHcHHHHHHhh-cCCCEEEEeCCCCchHHHHHHHHHHH
Q 013425 367 -QKVYVQHKMLEQSQRIWNLL-LSKASIYVAGSATKMPSDVWSTFEEI 412 (443)
Q Consensus 367 -~k~yVqd~l~~~~~~l~~~l-~~~~~iyvCG~~~~M~~~V~~~L~~i 412 (443)
.++||++.+.+.. +.+.. ..++.+|+|||+ .|.++|++.|.+.
T Consensus 233 g~~g~v~~~~~~~~--l~~~~~~~~~~vyvCGp~-~m~~~v~~~l~~~ 277 (290)
T 2r6h_A 233 GYVGFIHQVIYDNY--LKDHDAPEDIEYYMCGPG-PMANAVKGMLENL 277 (290)
T ss_dssp SCBSCHHHHHHHHT--TTTCSCGGGEEEEEECCH-HHHHHHHHHHHHH
T ss_pred CeeEecCHHHHHhH--HhhccCcCCcEEEEECCH-HHHHHHHHHHHHc
Confidence 3678887664321 11111 136789999998 9999999887654
No 18
>1qfj_A Protein (flavin reductase); riboflavin, ferredoxin reductase superfami oxidoreductase; 2.20A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1
Probab=99.95 E-value=1.4e-27 Score=226.25 Aligned_cols=176 Identities=18% Similarity=0.209 Sum_probs=144.4
Q ss_pred CCHHHHHHhcCCCCcceeecCCCCCCCCCeEEEEEEEEEecCCCCcccCCccccc-ccCCCCCCCcEEEEEeecCCCCCC
Q 013425 206 MPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVW-LAGLDPQQGIYIPAWFQKGSLPRP 284 (443)
Q Consensus 206 ~p~~~ll~~lp~~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~-L~~l~~~~G~~v~i~~~~g~F~lp 284 (443)
.|+|++...+|....|+|||+|+|.. ++.++|+|++ ...|.+|++ +.++++ |+.|.+.+|.|.|.++
T Consensus 31 ~pGq~v~l~~~~~~~R~ySi~s~~~~-~~~l~l~i~~---------~~~G~~s~~~~~~l~~--Gd~v~v~gP~G~~~~~ 98 (232)
T 1qfj_A 31 RAGQYLMVVMDERDKRPFSMASTPDE-KGFIELHIGA---------SEINLYAKAVMDRILK--DHQIVVDIPHGEAWLR 98 (232)
T ss_dssp CTTCEEEEESSSSCEEEEECCSCTTS-TTCEEEEEC---------------CCHHHHHHHHH--HSEEEEEEEECSCCCC
T ss_pred CCCCEEEEECCCCceeeeecCCCCCC-CCcEEEEEEE---------ccCCchhHHHHHhCCC--CCEEEEeCCccceEeC
Confidence 58998887788788999999999864 5789999943 345666765 668999 9999999999999988
Q ss_pred -CCCCCeEEEeCCccchhHHHHHHHHHHhcCCCCCCCEEEEEeecCCccccCHHHHHHhhhcCCCccccCCCeEEEEEcc
Q 013425 285 -PPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSR 363 (443)
Q Consensus 285 -~~~~piImIa~GTGIAPfrs~lq~~~~~~~~~~~~~~~L~~G~R~~~d~ly~~el~~~~~~~g~l~~~~~~~~~~a~Sr 363 (443)
+...+++|||+|||||||++++++....... .+++|+||+|+.+|++|.+||+++.+.++++ +++.++|+
T Consensus 99 ~~~~~~~vliagG~GitP~~~~l~~l~~~~~~---~~v~l~~~~r~~~~~~~~~el~~l~~~~~~~------~~~~~~s~ 169 (232)
T 1qfj_A 99 DDEERPMILIAGGTGFSYARSILLTALARNPN---RDITIYWGGREEQHLYDLCELEALSLKHPGL------QVVPVVEQ 169 (232)
T ss_dssp SCSSSCEEEEEETTCHHHHHHHHHHHHHHCTT---CCEEEEEEESSGGGCTTHHHHHHHHHHCTTE------EEEEEESS
T ss_pred CCCCCcEEEEEecccHhHHHHHHHHHHhcCCC---CcEEEEEeeCCHHHhhhHHHHHHHHHHCCCe------EEEEEEcC
Confidence 5578999999999999999999999876544 7899999999999999999999998766788 89999998
Q ss_pred CCC----CcccchhhHHHcHHHHHHhhc-CCCEEEEeCCCCchHHHHHHHH
Q 013425 364 KQP----QKVYVQHKMLEQSQRIWNLLL-SKASIYVAGSATKMPSDVWSTF 409 (443)
Q Consensus 364 ~~~----~k~yVqd~l~~~~~~l~~~l~-~~~~iyvCG~~~~M~~~V~~~L 409 (443)
+++ .++||++.+.+. +.. .++.+|+|||+ .|.+++++.|
T Consensus 170 ~~~~~~g~~g~v~~~~~~~------~~~~~~~~vyvCGp~-~m~~~v~~~l 213 (232)
T 1qfj_A 170 PEAGWRGRTGTVLTAVLQD------HGTLAEHDIYIAGRF-EMAKIARDLF 213 (232)
T ss_dssp CCTTCCSEESCHHHHHHHH------CSCCTTCEEEEESCH-HHHHHHHHHH
T ss_pred CCCCcCCceeeHHHHHHHh------cCCccccEEEEECCH-HHHHHHHHHH
Confidence 654 367888776543 112 37899999998 9999998777
No 19
>1fdr_A Flavodoxin reductase; ferredoxin reductase, flavin, oxidoreductase, flavoprotein; HET: FAD; 1.70A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1 PDB: 2xnj_A* 3fpk_A*
Probab=99.94 E-value=1.4e-27 Score=228.40 Aligned_cols=184 Identities=16% Similarity=0.172 Sum_probs=149.5
Q ss_pred CCHHHHHHhcCC---CCcceeecCCCCCCCCCeEEEEEEEEEecCCCCcccCCcccccccCCCCCCCcEEEEE-eecCCC
Q 013425 206 MPIDWLVQLVPP---LKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIPAW-FQKGSL 281 (443)
Q Consensus 206 ~p~~~ll~~lp~---~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~~~G~~v~i~-~~~g~F 281 (443)
.|+|++...+|. ...|+|||+|+|.. +.++|+|+. .+.|.+|+||+++++ |+.|.+. +|.|.|
T Consensus 32 ~pGq~v~l~~~~~g~~~~R~ySi~s~~~~--~~l~~~v~~---------~~~G~~s~~l~~l~~--Gd~v~v~~gP~G~f 98 (248)
T 1fdr_A 32 TAGQFTKLGLEIDGERVQRAYSYVNSPDN--PDLEFYLVT---------VPDGKLSPRLAALKP--GDEVQVVSEAAGFF 98 (248)
T ss_dssp CTTCEEEEEECC---CEEEEEECCSCTTC--SSEEEEEEC---------CTTCSSHHHHHTCCT--TCEEEEESSCBCCC
T ss_pred CCCCcEEEEccCCCCeeeeeecccCCCCC--CcEEEEEEE---------eCCCchhhHHHhCCC--cCEEEEecCCccee
Confidence 588888777763 46899999999864 789999843 356999999999999 9999999 999999
Q ss_pred CCC-CC-CCCeEEEeCCccchhHHHHHHHHHHhcCCCCCCCEEEEEeecCCccccCHHHHHHhhhcC-CCccccCCCeEE
Q 013425 282 PRP-PP-SVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLND-GVFSEAKGGGFY 358 (443)
Q Consensus 282 ~lp-~~-~~piImIa~GTGIAPfrs~lq~~~~~~~~~~~~~~~L~~G~R~~~d~ly~~el~~~~~~~-g~l~~~~~~~~~ 358 (443)
.++ .. .++++|||+|||||||++++++....... .+++|+||+|+.+|++|.+||+++.+.+ +++ +++
T Consensus 99 ~l~~~~~~~~~vliagG~GitP~~~~l~~l~~~~~~---~~v~l~~~~r~~~~~~~~~el~~l~~~~~~~~------~~~ 169 (248)
T 1fdr_A 99 VLDEVPHCETLWMLATGTAIGPYLSILRLGKDLDRF---KNLVLVHAARYAADLSYLPLMQELEKRYEGKL------RIQ 169 (248)
T ss_dssp SGGGSCCCSEEEEEEEGGGGHHHHHHHHHCCSCTTC---SEEEEEEEESSGGGCTTHHHHHHHHHHTTTSE------EEE
T ss_pred EcCCCCCCceEEEEEecccHHHHHHHHHHHHhhCCC---CcEEEEEEcCCHHHhhHHHHHHHHHHhCcCcE------EEE
Confidence 987 43 68999999999999999999986543222 7899999999999999999999998765 478 899
Q ss_pred EEEccCCC---CcccchhhHHHcH-HHHHHh-hc-CCCEEEEeCCCCchHHHHHHHH-HHH
Q 013425 359 VAFSRKQP---QKVYVQHKMLEQS-QRIWNL-LL-SKASIYVAGSATKMPSDVWSTF-EEI 412 (443)
Q Consensus 359 ~a~Sr~~~---~k~yVqd~l~~~~-~~l~~~-l~-~~~~iyvCG~~~~M~~~V~~~L-~~i 412 (443)
.++|+++. .+++|++.+.+.. +..... .. .++.+|+|||+ .|.++|++.| .+.
T Consensus 170 ~~~s~~~~~~~~~g~v~~~l~~~~l~~~~~~~~~~~~~~vy~CGp~-~m~~~v~~~l~~~~ 229 (248)
T 1fdr_A 170 TVVSRETAAGSLTGRIPALIESGELESTIGLPMNKETSHVMLCGNP-QMVRDTQQLLKETR 229 (248)
T ss_dssp EEESSSCCTTEEESCHHHHHHTSHHHHHHTSCCCTTTEEEEEEECH-HHHHHHHHHHHHHH
T ss_pred EEEecCCCCCCcceeeChHHHhhhHHHhhccCCCccCCEEEEeCCH-HHHHHHHHHHHHHc
Confidence 99999865 3689998876542 222221 22 47899999998 9999999887 553
No 20
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=99.94 E-value=4.3e-27 Score=235.56 Aligned_cols=178 Identities=21% Similarity=0.275 Sum_probs=151.1
Q ss_pred CCHHHHHHhcCC-CCcceeecCCCCCCCCCeEEEEEEEEEecCCCCcccCCccccccc-CCCCCCCcEEEEEeecCCCCC
Q 013425 206 MPIDWLVQLVPP-LKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLA-GLDPQQGIYIPAWFQKGSLPR 283 (443)
Q Consensus 206 ~p~~~ll~~lp~-~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~-~l~~~~G~~v~i~~~~g~F~l 283 (443)
.|||++...+|. ..+|+|||+|+|. .+.++|+|++ ...|.+|+||. ++++ |+.|.+.+|.|.|.+
T Consensus 140 ~pGQ~v~l~~~~~~~~R~ySi~s~~~--~~~l~~~vk~---------~~~G~~S~~L~~~l~~--Gd~v~v~gP~G~f~~ 206 (338)
T 1krh_A 140 LAGQYVNVTLPGTTETRSYSFSSQPG--NRLTGFVVRN---------VPQGKMSEYLSVQAKA--GDKMSFTGPFGSFYL 206 (338)
T ss_dssp CTTCEEEEECTTSSCEEEEECCSCTT--CSEEEEEEEC---------CTTCHHHHHHHTTCCT--TCEEEEEEEECSCSC
T ss_pred CCCCeEEEEcCCCCccccccccCCCC--CCeEEEEEEE---------cCCCCchhhHhhccCC--CCEEEEECCccceEe
Confidence 589998777776 5789999999986 5899999943 45799999994 8999 999999999999998
Q ss_pred CCCCCCeEEEeCCccchhHHHHHHHHHHhcCCCCCCCEEEEEeecCCccccCHHHHHHhhhcCCCccccCCCeEEEEEcc
Q 013425 284 PPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSR 363 (443)
Q Consensus 284 p~~~~piImIa~GTGIAPfrs~lq~~~~~~~~~~~~~~~L~~G~R~~~d~ly~~el~~~~~~~g~l~~~~~~~~~~a~Sr 363 (443)
+...+|++|||+|||||||++++++....+.. .+++||||+|+.+|++|.+||+++.+.++++ +++.++|+
T Consensus 207 ~~~~~~~vliagGtGiaP~~s~l~~l~~~~~~---~~v~l~~~~r~~~d~~~~~el~~l~~~~~~~------~~~~~~s~ 277 (338)
T 1krh_A 207 RDVKRPVLMLAGGTGIAPFLSMLQVLEQKGSE---HPVRLVFGVTQDCDLVALEQLDALQQKLPWF------EYRTVVAH 277 (338)
T ss_dssp CCCSSCEEEEEEGGGHHHHHHHHHHHHHHCCS---SCEEEEEEESSGGGCCCHHHHHHHHHHCTTE------EEEEEETT
T ss_pred CCCCceEEEEEccccHhHHHHHHHHHHHcCCC---CeEEEEEEeCCHHHhhhHHHHHHHHHhCCCe------EEEEEEec
Confidence 84358999999999999999999999876544 7899999999999999999999998866788 89999998
Q ss_pred CCC---CcccchhhHHHcHHHHHHhhc-CCCEEEEeCCCCchHHHHHHHHHHH
Q 013425 364 KQP---QKVYVQHKMLEQSQRIWNLLL-SKASIYVAGSATKMPSDVWSTFEEI 412 (443)
Q Consensus 364 ~~~---~k~yVqd~l~~~~~~l~~~l~-~~~~iyvCG~~~~M~~~V~~~L~~i 412 (443)
++. .++||++.+.+. .+. .+..+|+|||+ .|.+++++.|.+.
T Consensus 278 ~~~~~~~~g~v~~~l~~~------~~~~~~~~vy~CGp~-~m~~~v~~~l~~~ 323 (338)
T 1krh_A 278 AESQHERKGYVTGHIEYD------WLNGGEVDVYLCGPV-PMVEAVRSWLDTQ 323 (338)
T ss_dssp CCSSSSEESCSGGGCCGG------GGGGGCSEEEEEEEH-HHHHHHHHHHHHH
T ss_pred CCCCCCccCccCHHHHHh------hcccCCcEEEEECCH-HHHHHHHHHHHHc
Confidence 765 368999887632 122 47889999998 9999999877653
No 21
>2eix_A NADH-cytochrome B5 reductase; flavoprotein, FAD-binding domain, NADH-binding, oxidoreducta; HET: FAD; 1.56A {Physarum polycephalum}
Probab=99.94 E-value=1.5e-27 Score=227.63 Aligned_cols=180 Identities=18% Similarity=0.215 Sum_probs=146.2
Q ss_pred CCHHHHHHhcC---CCCcceeecCCCCCCCCCeEEEEEEEEEecCCCCcccCCcccccccCCCCCCCcEEEEEeecCCCC
Q 013425 206 MPIDWLVQLVP---PLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIPAWFQKGSLP 282 (443)
Q Consensus 206 ~p~~~ll~~lp---~~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~~~G~~v~i~~~~g~F~ 282 (443)
.|+|++...+| ....|+|||+|.+.. .+.++|+|++ ...|.+|+||+++++ |+.|.+.+|.|.|.
T Consensus 43 ~pGq~v~l~~~~~g~~~~R~ysi~s~~~~-~~~~~l~vk~---------~~~G~~S~~l~~l~~--Gd~v~v~gP~G~f~ 110 (243)
T 2eix_A 43 PIGQHMSVKATVDGKEIYRPYTPVSSDDE-KGYFDLIIKV---------YEKGQMSQYIDHLNP--GDFLQVRGPKGQFD 110 (243)
T ss_dssp CTTCEEEEEEEETTEEEEEEECCCSCTTC-CSEEEEEEEC---------CTTCHHHHHHHTCCT--TCEEEEEEEECSCC
T ss_pred CCceEEEEEEeeCCCEEEeeeeecCCCCC-CCEEEEEEEE---------cCCCCcchHhhcCCC--CCEEEEECCeEEEE
Confidence 58888766665 236899999999853 5889999943 357999999999999 99999999999999
Q ss_pred CC-CCCCCeEEEeCCccchhHHHHHHHHHHhcCCCCCCCEEEEEeecCCccccCHHHHHHhhhcCCCccccCCCeEEEEE
Q 013425 283 RP-PPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAF 361 (443)
Q Consensus 283 lp-~~~~piImIa~GTGIAPfrs~lq~~~~~~~~~~~~~~~L~~G~R~~~d~ly~~el~~~~~~~g~l~~~~~~~~~~a~ 361 (443)
++ +...+++|||+|||||||++++++....... ..+++|+||+|+.+|++|++||+++.+.++++ +++.++
T Consensus 111 ~~~~~~~~~vliagG~GiaP~~~~l~~l~~~~~~--~~~v~l~~~~r~~~~~~~~~el~~l~~~~~~~------~~~~~~ 182 (243)
T 2eix_A 111 YKPNMVKEMGMIAGGTGITPMLQVARAIIKNPKE--KTIINLIFANVNEDDILLRTELDDMAKKYSNF------KVYYVL 182 (243)
T ss_dssp CCTTSSSEEEEEEEGGGHHHHHHHHHHHHTCTTC--CCEEEEEEEEEEGGGCTTHHHHHHHHHHCTTE------EEEEEE
T ss_pred eCCCCCcEEEEEecCccHHHHHHHHHHHHhCCCC--CcEEEEEEEcCCHHHhhHHHHHHHHHHHCCCe------EEEEEe
Confidence 98 5578999999999999999999998764211 26899999999999999999999998876778 899999
Q ss_pred ccCCC----CcccchhhHHHcHHHHHHhhc---CCCEEEEeCCCCchHHHHHHHHHHH
Q 013425 362 SRKQP----QKVYVQHKMLEQSQRIWNLLL---SKASIYVAGSATKMPSDVWSTFEEI 412 (443)
Q Consensus 362 Sr~~~----~k~yVqd~l~~~~~~l~~~l~---~~~~iyvCG~~~~M~~~V~~~L~~i 412 (443)
|++.+ .++||++.+.+ +.+. .++.+|+|||+ .|.++|++.|.+.
T Consensus 183 s~~~~~~~g~~g~v~~~~l~------~~~~~~~~~~~vy~CGp~-~m~~~v~~~l~~~ 233 (243)
T 2eix_A 183 NNPPAGWTGGVGFVSADMIK------QHFSPPSSDIKVMMCGPP-MMNKAMQGHLETL 233 (243)
T ss_dssp EECCTTCCSEESSCCHHHHH------HHSCCTTSSEEEEEESSH-HHHHHHHHHHHHH
T ss_pred CCCCccccCcCCccCHHHHH------HhcCCCCCCeEEEEECCH-HHHHHHHHHHHHc
Confidence 98543 36788864321 1222 36789999998 9999999887654
No 22
>1umk_A B5R, NADH-cytochrome B5 reductase; flavoprotein, beta barrel, FAD-binding domain, NADH-binding domain, oxidoreductase; HET: FAD; 1.75A {Homo sapiens} SCOP: b.43.4.2 c.25.1.1 PDB: 1ndh_A* 1i7p_A* 1ib0_A* 1qx4_A*
Probab=99.94 E-value=1e-27 Score=232.97 Aligned_cols=192 Identities=17% Similarity=0.154 Sum_probs=149.9
Q ss_pred CCHHHHHHhcC---CCCcceeecCCCCCCCCCeEEEEEEEEEecCCCCcccCCcccccccCCCCCCCcEEEEEeecCCCC
Q 013425 206 MPIDWLVQLVP---PLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIPAWFQKGSLP 282 (443)
Q Consensus 206 ~p~~~ll~~lp---~~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~~~G~~v~i~~~~g~F~ 282 (443)
.|||++...++ ...+|+|||+|++.. ++.++|+|+++.+.+..+....|.+|+||+++++ |+.|.+.+|.|.|.
T Consensus 48 ~pGQ~v~l~~~~~g~~~~R~ySi~s~~~~-~~~~~l~vk~~~~~~~~~~~~~G~~S~~L~~l~~--Gd~v~v~gP~G~~~ 124 (275)
T 1umk_A 48 PVGQHIYLSARIDGNLVVRPYTPISSDDD-KGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMQI--GDTIEFRGPSGLLV 124 (275)
T ss_dssp CTTCEEEEEEEETTEEEEEEECCSSCTTC-CSEEEEEEECCCSSSBTTBTTCCHHHHHHHHCCT--TCEEEEEEEECSEE
T ss_pred CCCcEEEEEEeeCCcEEEeccccCCccCC-CCeEEEEEEEeccCcccccCCCChhHHHHhcCCC--CCEEEEEcCccceE
Confidence 57888766554 247899999999853 5899999988766554444467999999999999 99999999999875
Q ss_pred C--------C-C--------CCCCeEEEeCCccchhHHHHHHHHHHhcCCCCCCCEEEEEeecCCccccCHHHHHHhhhc
Q 013425 283 R--------P-P--------PSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLN 345 (443)
Q Consensus 283 l--------p-~--------~~~piImIa~GTGIAPfrs~lq~~~~~~~~~~~~~~~L~~G~R~~~d~ly~~el~~~~~~ 345 (443)
+ + + ...++||||+|||||||+++++++..... ...+++|+||+|+.+|++|++||+++.+.
T Consensus 125 ~~~~~~f~l~~~~~~~~~~~~~~~~vliagGtGIaP~~~~l~~l~~~~~--~~~~v~l~~~~r~~~d~~~~~el~~l~~~ 202 (275)
T 1umk_A 125 YQGKGKFAIRPDKKSNPIIRTVKSVGMIAGGTGITPMLQVIRAIMKDPD--DHTVCHLLFANQTEKDILLRPELEELRNK 202 (275)
T ss_dssp EEETTEEEECSSTTSCCEEEECSEEEEEEEGGGHHHHHHHHHHHHTCTT--CCCEEEEEEEESSGGGCTTHHHHHHHHHH
T ss_pred ecCCccccccccccccccccCCceEEEEecCccHhHHHHHHHHHHhCCC--CCcEEEEEEEcCCHHHhhHHHHHHHHHHh
Confidence 3 3 1 35799999999999999999999876421 12789999999999999999999999876
Q ss_pred CC-CccccCCCeEEEEEccCCC----CcccchhhHHHcHHHHHHhhcCCCEEEEeCCCCchHH-HHHHHHHHH
Q 013425 346 DG-VFSEAKGGGFYVAFSRKQP----QKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPS-DVWSTFEEI 412 (443)
Q Consensus 346 ~g-~l~~~~~~~~~~a~Sr~~~----~k~yVqd~l~~~~~~l~~~l~~~~~iyvCG~~~~M~~-~V~~~L~~i 412 (443)
++ ++ +++.++|++++ .++||++.+.+. ......+++.+|+|||+ .|++ ++++.|.+.
T Consensus 203 ~~~~~------~~~~~~s~~~~~~~~~~g~v~~~~l~~---~l~~~~~~~~vyvCGp~-~m~~~~v~~~L~~~ 265 (275)
T 1umk_A 203 HSARF------KLWYTLDRAPEAWDYGQGFVNEEMIRD---HLPPPEEEPLVLMCGPP-PMIQYACLPNLDHV 265 (275)
T ss_dssp CTTTE------EEEEEESSCCSSCSSEESSCCHHHHHH---HSCCGGGCCEEEEESCH-HHHHHTTHHHHHHH
T ss_pred CcCcE------EEEEEEcCCCccccCccCccCHHHHHH---hcCCCCCCeEEEEECCH-HHHHHHHHHHHHHc
Confidence 54 57 89999998654 367888743221 11111247899999998 9998 888887654
No 23
>4eh1_A Flavohemoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: FAD; 2.20A {Vibrio cholerae o1 biovar el tor}
Probab=99.94 E-value=5.9e-27 Score=223.24 Aligned_cols=180 Identities=17% Similarity=0.272 Sum_probs=146.4
Q ss_pred CCHHHHHHhcCCC-----CcceeecCCCCCCCCCeEEEEEEEEEecCCCCcccCCccccccc-CCCCCCCcEEEEEeecC
Q 013425 206 MPIDWLVQLVPPL-----KTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLA-GLDPQQGIYIPAWFQKG 279 (443)
Q Consensus 206 ~p~~~ll~~lp~~-----~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~-~l~~~~G~~v~i~~~~g 279 (443)
.|+|++...+|.. .+|+|||+|+|.. +.++|+|+.+.. +....|.+|+||+ ++++ |+.|.+.+|.|
T Consensus 35 ~pGq~v~l~~~~~~~~~~~~R~ySi~s~~~~--~~~~i~vk~~~~----~~~~~G~~S~~l~~~l~~--G~~v~v~gP~G 106 (243)
T 4eh1_A 35 QPGQYIGIEVTPEGSDYREIRQYSLSHASNG--REYRISVKREGV----GSDNPGLVSHYLHNNVKV--GDSVKLYAPAG 106 (243)
T ss_dssp CTTCEEEEEECCSSCSSCEEEEEEBCSCCCS--SCEEEEEECTTT----TSSSCCHHHHHHHHHCCT--TCEEEEEEEEC
T ss_pred CCCCEEEEEEecCCCccccceeeEeccCCCC--CeEEEEEEEeec----CCCCCCeehhHHHhcCCC--CCEEEEEccCc
Confidence 5889887777632 4699999999853 789999854211 1126799999997 6999 99999999999
Q ss_pred CCCCCCCCCCeEEEeCCccchhHHHHHHHHHHhcCCCCCCCEEEEEeecCCccccCHHHHHHhhhcCCCccccCCCeEEE
Q 013425 280 SLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYV 359 (443)
Q Consensus 280 ~F~lp~~~~piImIa~GTGIAPfrs~lq~~~~~~~~~~~~~~~L~~G~R~~~d~ly~~el~~~~~~~g~l~~~~~~~~~~ 359 (443)
.|.+++...++||||+|||||||+++++++..+... . ++|+||+|+.+|++|.+||+++.+.+ ++ ++++
T Consensus 107 ~~~~~~~~~~~vliagGtGitp~~~~l~~l~~~~~~---~-v~l~~~~r~~~~~~~~~el~~l~~~~-~~------~~~~ 175 (243)
T 4eh1_A 107 DFFYVERERPVVLISAGVGATPMQAILHTLAKQNKS---G-VTYLYACNSAKEHTFAQETAQLIAQQ-GW------MQQV 175 (243)
T ss_dssp SCCCCCCSSCEEEEEEGGGHHHHHHHHHHHHHTTCC---S-EEEEEEESSGGGCTTHHHHHHHHHHH-TC------EEEE
T ss_pred ccCcCCCCCCEEEEEccccHHHHHHHHHHHHHcCCC---e-EEEEEEeCChhhhhHHHHHHHHHHhC-Ce------EEEE
Confidence 999986678999999999999999999999876543 4 99999999999999999999999874 78 8999
Q ss_pred EEccCCC---CcccchhhHHHcHHHHHHhhcCCCEEEEeCCCCchHHHHHHHHHHH
Q 013425 360 AFSRKQP---QKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEI 412 (443)
Q Consensus 360 a~Sr~~~---~k~yVqd~l~~~~~~l~~~l~~~~~iyvCG~~~~M~~~V~~~L~~i 412 (443)
++|++.+ .++++++.+. . +-..+..+|+|||+ .|.+++++.|.+.
T Consensus 176 ~~s~~~~~~~~~g~~~~~~~-~------~~~~~~~vyvCGp~-~m~~~v~~~l~~~ 223 (243)
T 4eh1_A 176 WYRDESADDVLQGEMQLAEL-I------LPIEDGDFYLCGPI-GFMQYVVKQLLAL 223 (243)
T ss_dssp EESSCCCTTCEESSCCCTTS-C------CCTTTCEEEEEECH-HHHHHHHHHHHHH
T ss_pred EEccCCCcccccCCccHHHe-e------ccCCCcEEEEECCH-HHHHHHHHHHHHc
Confidence 9998665 3566665443 1 11248899999998 9999999888754
No 24
>4fk8_A Ferredoxin--NADP reductase; ssgcid, NIH, niaid, structural genomics, national institute allergy and infectious diseases; HET: FAD; 2.10A {Burkholderia thailandensis} PDB: 4f7d_A*
Probab=99.93 E-value=1e-27 Score=232.70 Aligned_cols=201 Identities=18% Similarity=0.238 Sum_probs=154.3
Q ss_pred CCHHHHHHhcC---CCCcceeecCCCCCCCCCeEEEEEEEEEecCCCCcccCCcccccccCCCCCCCcEEEEE-eecCCC
Q 013425 206 MPIDWLVQLVP---PLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIPAW-FQKGSL 281 (443)
Q Consensus 206 ~p~~~ll~~lp---~~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~~~G~~v~i~-~~~g~F 281 (443)
.|||++...+| ....|+|||+|+|. .+.++|+|.. ...|.+|+||+++++ |+.|.+. +|.|.|
T Consensus 48 ~pGQ~v~l~~~~~~~~~~r~ySi~s~~~--~~~~~~~v~~---------~~~G~~s~~l~~l~~--Gd~v~v~~gP~G~~ 114 (271)
T 4fk8_A 48 NNGEFTMVGLEVDGKPLTRAYSIVSPNY--EEHLEFFSIK---------VQNGPLTSRLQHLKV--GDPVLIGKKPTGTL 114 (271)
T ss_dssp CTTCEEEEEEEETTEEEEEEEECCSCTT--SSSEEEEEEC---------CTTCTTHHHHTTCCT--TCEEEEESCCBCSC
T ss_pred CCCCEEEEEccCCCceeeeeEeccCCCC--CCcEEEEEEE---------ECCCchhhHHhcCCC--CCEEEEecCCCcce
Confidence 58898877776 23589999999985 3679988843 357999999999999 9999999 999999
Q ss_pred CCCC--CCCCeEEEeCCccchhHHHHHHHHHHhcCCCCCCCEEEEEeecCCccccCHHHHHHhhhcCC--------Cccc
Q 013425 282 PRPP--PSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDG--------VFSE 351 (443)
Q Consensus 282 ~lp~--~~~piImIa~GTGIAPfrs~lq~~~~~~~~~~~~~~~L~~G~R~~~d~ly~~el~~~~~~~g--------~l~~ 351 (443)
.++. ...+++|||+|||||||+++++++...... .+++|+||+|+.+|++|.+||+++.+.+. ++
T Consensus 115 ~~~~~~~~~~~vliagG~GitP~~~~l~~l~~~~~~---~~v~l~~~~r~~~~~~~~~el~~l~~~~~~~~~~~~~~~-- 189 (271)
T 4fk8_A 115 VADNLLPGKTLWMLSTGTGLAPFMSIIRDPDIYERF---DKVVLTHTCRLKGELAYMDYIKHDLPGHEYLGDVIREKL-- 189 (271)
T ss_dssp CGGGBCCCSEEEEEECGGGGHHHHHHTTCHHHHHHC---SEEEEEECCCSHHHHHHHHHHHTCCTTCTTHHHHHHHHE--
T ss_pred ecCCcCCCCeEEEEECCEEHHHHHHHHHHHHhcCCC---CCEEEEEecCCHHHHhHHHHHHHHHHhCccccccccceE--
Confidence 9873 678999999999999999999998765444 78999999999999999999999877643 46
Q ss_pred cCCCeEEEEEccCCC-CcccchhhHHHcHHHHHHh----h-cCCCEEEEeCCCCchHHHHHHHHHHHHHHhCCCCHHHHH
Q 013425 352 AKGGGFYVAFSRKQP-QKVYVQHKMLEQSQRIWNL----L-LSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAA 425 (443)
Q Consensus 352 ~~~~~~~~a~Sr~~~-~k~yVqd~l~~~~~~l~~~----l-~~~~~iyvCG~~~~M~~~V~~~L~~i~~~~~~~~~~~a~ 425 (443)
+++.++|+++. .+++|++.+.+.. .+.++ + .+++.+|+|||+ .|.+++++.|.+.......
T Consensus 190 ----~~~~~~s~~~~~~~G~v~~~~~~~~-l~~~~~~~~~~~~~~~v~vCGp~-~m~~~v~~~l~~~gv~~~~------- 256 (271)
T 4fk8_A 190 ----VYYPTVTREEFENEGRITDLIASGK-LFTDLDMPPFSPEQDRVMLCGST-AMLKDTTELLKKAGLVEGK------- 256 (271)
T ss_dssp ----EEEECC-------CCHHHHHHHHSH-HHHHTTCCCCCTTTEEEEEEECH-HHHHHHHHHHHHTTCCBCB-------
T ss_pred ----EEEEEecCCccccccccChHHhcch-hhhhcccccCCCCCCEEEEECCH-HHHHHHHHHHHHcCCchhh-------
Confidence 78888998764 4788998776531 11111 1 247899999998 9999999888765433222
Q ss_pred HHHHHHHHcCCEEEeec
Q 013425 426 NWLKALQRAGRYHVEAW 442 (443)
Q Consensus 426 ~~l~~l~~~~Ry~~dvW 442 (443)
+...|+|+.|.|
T Consensus 257 -----i~~~~~~~~E~y 268 (271)
T 4fk8_A 257 -----NSAPGHYVIERA 268 (271)
T ss_dssp -----TTBCBSEEEEES
T ss_pred -----cCCCCcEEEEEe
Confidence 233678888765
No 25
>2bgi_A Ferredoxin-NADP(H) reductase; ferredoxin(flavodoxin)-NADP(H) reductase, flavoproteins, electron transfer, oxidoreductase; HET: FAD HTG; 1.68A {Rhodobacter capsulatus} PDB: 2bgj_A* 2vnh_A* 2vni_A* 2vnj_A* 2vnk_A*
Probab=99.93 E-value=1.2e-26 Score=225.47 Aligned_cols=183 Identities=17% Similarity=0.218 Sum_probs=147.4
Q ss_pred CCHHHHHHhcCC----CCcceeecCCCCCCCCCeEEEEEEEEEecCCCCcccCCcccccccCCCCCCCcEEEEE-eecCC
Q 013425 206 MPIDWLVQLVPP----LKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIPAW-FQKGS 280 (443)
Q Consensus 206 ~p~~~ll~~lp~----~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~~~G~~v~i~-~~~g~ 280 (443)
.|||++...+|. ..+|+|||+|+|.. +.++|+|+. .+.|.+|+||.++++ |+.|.+. +|.|.
T Consensus 45 ~pGQ~v~l~~~~~~g~~~~R~ySi~s~~~~--~~~~l~v~~---------~~~G~~s~~l~~l~~--Gd~v~v~~gP~G~ 111 (272)
T 2bgi_A 45 RSGEFVMIGLLDDNGKPIMRAYSIASPAWD--EELEFYSIK---------VPDGPLTSRLQHIKV--GEQIILRPKPVGT 111 (272)
T ss_dssp CTTCEEEEEEECTTSCEEEEEEECCSCTTC--SEEEEEEEC---------CTTCTTHHHHTTCCT--TCEEEEEEEEECS
T ss_pred CCCCEEEEEeccCCCCeeeeeeeeccCCCC--CeEEEEEEE---------ccCCCchhHHHhCCC--CCEEEEeeCCCCc
Confidence 588988777762 36799999999863 789999843 356999999999999 9999999 89999
Q ss_pred CCCC-CC-CCCeEEEeCCccchhHHHHHHHHHHhcCCCCCCCEEEEEeecCCccccCHHHHH-Hhhh-----cC--CCcc
Q 013425 281 LPRP-PP-SVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWL-SHSL-----ND--GVFS 350 (443)
Q Consensus 281 F~lp-~~-~~piImIa~GTGIAPfrs~lq~~~~~~~~~~~~~~~L~~G~R~~~d~ly~~el~-~~~~-----~~--g~l~ 350 (443)
|.++ .. ..+++|||+|||||||++++++....... .+++|+||+|+.+|++|.+||+ ++.+ .+ +++
T Consensus 112 f~~~~~~~~~~~vliagG~GiaP~~~~l~~l~~~~~~---~~v~l~~~~r~~~~~~~~~el~~~l~~~~~~~~~~~~~~- 187 (272)
T 2bgi_A 112 LVIDALLPGKRLWFLATGTGIAPFASLMREPEAYEKF---DEVIMMHACRTVAELEYGRQLVEALQEDPLIGELVEGKL- 187 (272)
T ss_dssp CCGGGBCCCSEEEEEEEGGGGHHHHHHTTCGGGGTSC---SEEEEEEEESSSGGGHHHHHHHHHHHHCTTTTTTSTTTE-
T ss_pred ccccccccCCeEEEEeecccHHHHHHHHHHHHhcCCC---CcEEEEEEeCCHHHhhHHHHHHHHHHhcchhhcccCCcE-
Confidence 9987 43 68999999999999999999987654333 6899999999999999999999 9876 32 577
Q ss_pred ccCCCeEEEEEccCCC-CcccchhhHHHcH-HHHHHh--hc-CCCEEEEeCCCCchHHHHHHHHHH
Q 013425 351 EAKGGGFYVAFSRKQP-QKVYVQHKMLEQS-QRIWNL--LL-SKASIYVAGSATKMPSDVWSTFEE 411 (443)
Q Consensus 351 ~~~~~~~~~a~Sr~~~-~k~yVqd~l~~~~-~~l~~~--l~-~~~~iyvCG~~~~M~~~V~~~L~~ 411 (443)
+++.++|+++. .++||++.+.+.. +....+ +. .++.+|+|||+ .|.++|++.|.+
T Consensus 188 -----~~~~~~s~~~~~~~g~v~~~l~~~~l~~~~~~~~~~~~~~~vyvCGp~-~m~~~v~~~l~~ 247 (272)
T 2bgi_A 188 -----KYYPTTTREEFHHMGRITDNLASGKVFEDLGIAPMNPETDRAMVCGSL-AFNVDVMKVLES 247 (272)
T ss_dssp -----EEEEEESSSCCSSBCCHHHHHHSCHHHHHHTCCCCCTTTEEEEEEECH-HHHHHHHHHHHT
T ss_pred -----EEEEEecCCccccCceechHHHhhhHhhhcccccCCCCCcEEEEECCH-HHHHHHHHHHHH
Confidence 88999999753 4789998876542 221111 12 47899999998 999999987764
No 26
>2qdx_A Ferredoxin reductase; oxidoreductase; HET: FAD; 1.55A {Pseudomonas aeruginosa} PDB: 3crz_A* 1a8p_A*
Probab=99.93 E-value=8.9e-27 Score=224.28 Aligned_cols=183 Identities=17% Similarity=0.206 Sum_probs=146.8
Q ss_pred CCHHHHHHhcCC---CCcceeecCCCCCCCCCeEEEEEEEEEecCCCCcccCCcccccccCCCCCCCcEEEEE-eecCCC
Q 013425 206 MPIDWLVQLVPP---LKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIPAW-FQKGSL 281 (443)
Q Consensus 206 ~p~~~ll~~lp~---~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~~~G~~v~i~-~~~g~F 281 (443)
.|||++...+|. ...|+|||+|+|.. +.++|+|.. .+.|.+|+||.++++ |+.|.+. +|.|.|
T Consensus 32 ~pGq~v~l~~~~~g~~~~R~ySi~s~~~~--~~~~~~i~~---------~~~G~~s~~l~~l~~--Gd~v~v~~gp~G~f 98 (257)
T 2qdx_A 32 KTGQFVMIGLEVDGRPLMRAYSIASPNYE--EHLEFFSIK---------VPDGPLTSRLQHLKE--GDELMVSRKPTGTL 98 (257)
T ss_dssp CTTCEEEEEEEETTEEEEEEEECCSCTTS--SEEEEEEEC---------CTTCTTHHHHTTCCT--TCEEEECSCCBCSC
T ss_pred CCCCEEEEEecCCCCceeeeeEeecCCCC--CeEEEEEEE---------eCCCcchhHHHhCCC--CCEEEEecCCCCCc
Confidence 588887766652 46899999999863 789998843 357999999999999 9999999 799999
Q ss_pred CCC-C-CCCCeEEEeCCccchhHHHHHHHHHHhcCCCCCCCEEEEEeecCCccccCHHHHH-Hhhh-----cC--CCccc
Q 013425 282 PRP-P-PSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWL-SHSL-----ND--GVFSE 351 (443)
Q Consensus 282 ~lp-~-~~~piImIa~GTGIAPfrs~lq~~~~~~~~~~~~~~~L~~G~R~~~d~ly~~el~-~~~~-----~~--g~l~~ 351 (443)
.++ . ...+++|||+|||||||++++++....... .+++|+||+|+.+|++|.+||+ ++.+ .+ +++
T Consensus 99 ~~~~~~~~~~~vliagG~GitP~~~~l~~l~~~~~~---~~v~l~~~~r~~~~~~~~~el~~~l~~~~~~~~~~~~~~-- 173 (257)
T 2qdx_A 99 VHDDLLPGKHLYLLSTGTGMAPFLSVIQDPETYERY---EKVILVHGVRWVSELAYADFITKVLPEHEYFGDQVKEKL-- 173 (257)
T ss_dssp CGGGBCSCSEEEEEEEGGGGHHHHHHTTCHHHHHHC---SEEEEEEEESSGGGCTTHHHHHTTGGGCTTTHHHHHHHE--
T ss_pred cCCcccCCCeEEEEEeceEHHHHHHHHHHHHhcCCC---CeEEEEEEcCCHHHhHhHHHHHHHHHhchhhhccCCCcE--
Confidence 987 3 368999999999999999999987665433 6899999999999999999999 8876 21 467
Q ss_pred cCCCeEEEEEccCCC-CcccchhhHHHcH-HHHHHh--h-cCCCEEEEeCCCCchHHHHHHHHHH
Q 013425 352 AKGGGFYVAFSRKQP-QKVYVQHKMLEQS-QRIWNL--L-LSKASIYVAGSATKMPSDVWSTFEE 411 (443)
Q Consensus 352 ~~~~~~~~a~Sr~~~-~k~yVqd~l~~~~-~~l~~~--l-~~~~~iyvCG~~~~M~~~V~~~L~~ 411 (443)
+++.++|+++. .+++|++.+.+.. +....+ + ..++.+|+|||+ .|.++|++.|.+
T Consensus 174 ----~~~~~~s~~~~~~~g~v~~~l~~~~l~~~~~~~~~~~~~~~vyvCGp~-~m~~~v~~~l~~ 233 (257)
T 2qdx_A 174 ----IYYPLVTREPFRNQGRQTDLMRSGKLFEDIGLPPMNPQDDRAMICGSP-SMLEETSAVLDS 233 (257)
T ss_dssp ----EEEEEESSSCCSSBSCHHHHHHHSHHHHHHTCCCCCTTTEEEEEEECH-HHHHHHHHHHHH
T ss_pred ----EEEEEecCCCcccCceechhhhhhhHHHhcccccCCcCCCEEEEECCH-HHHHHHHHHHHH
Confidence 88999999753 4789998876542 221111 1 247899999998 999999987765
No 27
>1gvh_A Flavohemoprotein; oxidoreductase, NADP, heme, flavoprotein, FAD, iron transpor; HET: FAD HEM; 2.19A {Escherichia coli} SCOP: a.1.1.2 b.43.4.2 c.25.1.5
Probab=99.93 E-value=4.9e-26 Score=232.69 Aligned_cols=178 Identities=15% Similarity=0.209 Sum_probs=145.4
Q ss_pred CCCHHHHHHhcCC-----CCcceeecCCCCCCCCCeEEEEEEEEEecCCCCcccCCcccccccC-CCCCCCcEEEEEeec
Q 013425 205 QMPIDWLVQLVPP-----LKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAG-LDPQQGIYIPAWFQK 278 (443)
Q Consensus 205 ~~p~~~ll~~lp~-----~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~~-l~~~~G~~v~i~~~~ 278 (443)
..|||++...+|+ ..+|+|||+|+|. .+.++|+|+. ...|.+|+||++ +++ ||.|.+.+|.
T Consensus 183 ~~pGQ~v~l~~~~~~~~~~~~R~YSi~s~p~--~~~~~i~Vk~---------~~~G~~S~~L~~~l~~--Gd~v~v~gP~ 249 (396)
T 1gvh_A 183 YRPGQYLGVWLKPEGFPHQEIRQYSLTRKPD--GKGYRIAVKR---------EEGGQVSNWLHNHANV--GDVVKLVAPA 249 (396)
T ss_dssp CCTTCEEEEEECCTTCSSCEEEEEECCSCCC--SSCEEEEEEC---------CTTCHHHHHHHHTCCT--TCEEEEEEEE
T ss_pred CCCCCeEEEEecCCCCccceeecceeccCCC--CCeEEEEEEE---------cCCCcchHHHHhcCCC--CCEEEEEcCC
Confidence 3589988777763 3489999999986 4789999953 346999999995 999 9999999999
Q ss_pred CCCCCC-CCCCCeEEEeCCccchhHHHHHHHHHHhcCCCCCCCEEEEEeecCCccccCHHHHHHhhhcCCCccccCCCeE
Q 013425 279 GSLPRP-PPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGF 357 (443)
Q Consensus 279 g~F~lp-~~~~piImIa~GTGIAPfrs~lq~~~~~~~~~~~~~~~L~~G~R~~~d~ly~~el~~~~~~~g~l~~~~~~~~ 357 (443)
|.|.++ +..+|++|||+|||||||+++++++...+.. .+++|+||+|+.+|++|++||+++.+.++++ ++
T Consensus 250 G~f~l~~~~~~~~vlIagGtGitP~~s~l~~l~~~~~~---~~v~l~~~~r~~~~~~~~~el~~l~~~~~~~------~~ 320 (396)
T 1gvh_A 250 GDFFMAVADDTPVTLISAGVGQTPMLAMLDTLAKAGHT---AQVNWFHAAENGDVHAFADEVKELGQSLPRF------TA 320 (396)
T ss_dssp CSCCCCCCTTCCEEEEEEGGGGHHHHHHHHHHHHHTCC---SCEEEEEEESCTTTCCSHHHHHHHHHTSSSE------EE
T ss_pred cceECCCCCCCCEEEEecchhHhHHHHHHHHHHhcCCC---CcEEEEEEeCCHHHhhhHHHHHHHHHHCCCe------EE
Confidence 999998 6789999999999999999999999876544 7899999999999999999999998876778 89
Q ss_pred EEEEccCCC---------Ccccchhh-HHHcHHHHHHhhcCCCEEEEeCCCCchHHHHHHHHHH
Q 013425 358 YVAFSRKQP---------QKVYVQHK-MLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEE 411 (443)
Q Consensus 358 ~~a~Sr~~~---------~k~yVqd~-l~~~~~~l~~~l~~~~~iyvCG~~~~M~~~V~~~L~~ 411 (443)
++++|++++ ..++++.. +.+.. .+ .++.+|+|||+ .|.++|++.|.+
T Consensus 321 ~~~~s~~~~~~~~~~~~~~~G~~~~~~l~~~~-----~~-~~~~vyvCGp~-~m~~~v~~~L~~ 377 (396)
T 1gvh_A 321 HTWYRQPSEADRAKGQFDSEGLMDLSKLEGAF-----SD-PTMQFYLCGPV-GFMQFTAKQLVD 377 (396)
T ss_dssp EEEESSCCHHHHHHTCCSEESSCCGGGSSSCC-----CC-TTCEEEEESCH-HHHHHHHHHHHH
T ss_pred EEEECCCCccccccCccCccCcCCHHHHhhcc-----CC-CCCEEEEeCCH-HHHHHHHHHHHH
Confidence 999998753 13455432 21110 11 27899999998 999999987764
No 28
>4g1v_A Flavohemoglobin; three domains: globin fold, antiparallel beta-barrel, alpha/ fold, RESP., FAD, oxidoreductase; HET: HEM FAD; 2.10A {Saccharomyces cerevisiae} PDB: 4g1b_A*
Probab=99.93 E-value=9.6e-26 Score=230.91 Aligned_cols=181 Identities=17% Similarity=0.227 Sum_probs=147.5
Q ss_pred CCHHHHHHhc--C--C---CCcceeecCCCCCCCCCeEEEEEEEEEecCCCCcccCCccccccc-CCCCCCCcEEEEEee
Q 013425 206 MPIDWLVQLV--P--P---LKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLA-GLDPQQGIYIPAWFQ 277 (443)
Q Consensus 206 ~p~~~ll~~l--p--~---~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~-~l~~~~G~~v~i~~~ 277 (443)
.|||++...+ | . ..+|+|||+|+|. ++.++|+|+.... .+..+.|.+|+||. ++++ ||.|.+.+|
T Consensus 185 ~pGQ~v~l~~~~~~~~~~~~~~R~ySi~s~p~--~~~~~i~Vk~~~~---~~~~~~G~~S~~L~~~l~~--Gd~v~v~gP 257 (399)
T 4g1v_A 185 TPGQYITVNTHPIRQENQYDALRHYSLCSAST--KNGLRFAVKMEAA---RENFPAGLVSEYLHKDAKV--GDEIKLSAP 257 (399)
T ss_dssp CTTCEEEEEECCCSTTCCSCEEEEEEBSCSCC--TTCEEEEEECCCC---BTTBCCCHHHHHHHHTCCT--TCEEEEEEE
T ss_pred CCCCEEEEEEeCCCCCCccceeeeecccCCCC--CCeEEEEEEeccC---CCCCCCCEehhHHHhCCCC--CCEEEEEec
Confidence 5899887765 3 3 3579999999985 4789999854211 01135899999996 8999 999999999
Q ss_pred cCCCCCC-C----CCCCeEEEeCCccchhHHHHHHHHHHhcCCCCCCCEEEEEeecCCccccCHHHHHHhhhcCCCcccc
Q 013425 278 KGSLPRP-P----PSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEA 352 (443)
Q Consensus 278 ~g~F~lp-~----~~~piImIa~GTGIAPfrs~lq~~~~~~~~~~~~~~~L~~G~R~~~d~ly~~el~~~~~~~g~l~~~ 352 (443)
.|.|.++ + ..+|+||||+|||||||++|++++...... ++++|+||+|+.+|++|.+||+++.+.++++
T Consensus 258 ~G~f~l~~~~~~~~~~~~vlIagG~GitP~~s~l~~l~~~~~~---~~v~l~~~~r~~~~~~~~~el~~l~~~~~~~--- 331 (399)
T 4g1v_A 258 AGDFAINKELIHQNEVPLVLLSSGVGVTPLLAMLEEQVKCNPN---RPIYWIQSSYDEKTQAFKKHVDELLAECANV--- 331 (399)
T ss_dssp ECSCCCCTTTTTCSSSCEEEEEEGGGHHHHHHHHHHHHHHCTT---SCEEEEEEESSSTTSTTHHHHHHHHTTCSSE---
T ss_pred ccceeeCcccccCCCCCEEEEecceeHhHHHHHHHHHHHcCCC---CCEEEEEecCCHHHhhhHHHHHHHHHhCCCc---
Confidence 9999998 5 588999999999999999999999887654 7899999999999999999999999876788
Q ss_pred CCCeEEEEEccCCCCcccchhhHHHcHHHHHHhhcCCCEEEEeCCCCchHHHHHHHHHHH
Q 013425 353 KGGGFYVAFSRKQPQKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEI 412 (443)
Q Consensus 353 ~~~~~~~a~Sr~~~~k~yVqd~l~~~~~~l~~~l~~~~~iyvCG~~~~M~~~V~~~L~~i 412 (443)
++++++|+++ ++++. +.+.+.+.+++.+|+|||+ .|.++|++.|.+.
T Consensus 332 ---~~~~~~s~~~---g~~~~------~~l~~~~~~~~~vyvCGp~-~m~~~v~~~L~~~ 378 (399)
T 4g1v_A 332 ---DKIIVHTDTE---PLINA------AFLKEKSPAHADVYTCGSL-AFMQAMIGHLKEL 378 (399)
T ss_dssp ---EEEEEETTTS---CCCCH------HHHHHHSCSSCEEEEEECH-HHHHHHHHHHHHT
T ss_pred ---EEEEEEeCCC---CcccH------HHHHhhCCCCCEEEEECCH-HHHHHHHHHHHHc
Confidence 8999999865 45543 2233344558999999998 9999999887653
No 29
>2cnd_A NADH-dependent nitrate reductase; nitrate assimilating enzyme, oxidoreductase, nitrogenous acceptor; HET: FAD; 2.50A {Zea mays} SCOP: b.43.4.2 c.25.1.1 PDB: 1cnf_A* 1cne_A*
Probab=99.93 E-value=2.1e-26 Score=222.92 Aligned_cols=192 Identities=17% Similarity=0.140 Sum_probs=142.6
Q ss_pred CCHHHHHHhcC---CCCcceeecCCCCCCCCCeEEEEEEEEEecCCCCcccCCcccccccCCCCCCCcEEEEEeecCC--
Q 013425 206 MPIDWLVQLVP---PLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIPAWFQKGS-- 280 (443)
Q Consensus 206 ~p~~~ll~~lp---~~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~~~G~~v~i~~~~g~-- 280 (443)
.|+|++...++ ...+|+|||+|++.. ++.++|+|+++.+..+.+....|.+|+||.++++ |+.|.+.+|.|.
T Consensus 44 ~pGQ~v~l~~~~~g~~~~R~ySi~s~~~~-~~~~~l~vk~~~~~~~~~~~~~G~~s~~l~~l~~--Gd~v~v~gP~G~~~ 120 (270)
T 2cnd_A 44 PIGKHIFVCATIEGKLCMRAYTPTSMVDE-IGHFDLLVKVYFKNEHPKFPNGGLMTQYLDSLPV--GSYIDVKGPLGHVE 120 (270)
T ss_dssp CTTCEEEEEEEETTEEEEEEECCCSCTTC-CSEEEEEEECCCSSCBTTBTTCCHHHHHHHHCCT--TCEEEEEEEECSEE
T ss_pred CCCCEEEEEeeeCCcEEEEeeccCCCccC-CCEEEEEEEEeccCcccccCCCCchhhHHhcCCC--CCEEEEECCcccce
Confidence 57887655543 246899999999853 5899999976532111111236999999999999 999999999986
Q ss_pred ------CCCCC---CCCCeEEEeCCccchhHHHHHHHHHHhcCCCCCCCEEEEEeecCCccccCHHHHHHhhhcCC-Ccc
Q 013425 281 ------LPRPP---PSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDG-VFS 350 (443)
Q Consensus 281 ------F~lp~---~~~piImIa~GTGIAPfrs~lq~~~~~~~~~~~~~~~L~~G~R~~~d~ly~~el~~~~~~~g-~l~ 350 (443)
|.++. ...++||||+|||||||+++++++...... ...+++||||+|+++|++|.+||+++.+.++ .+
T Consensus 121 ~~~~g~f~l~~~~~~~~~~vliagGtGiaP~~~~l~~l~~~~~~-~~~~v~l~~~~r~~~d~~~~~el~~l~~~~~~~~- 198 (270)
T 2cnd_A 121 YTGRGSFVINGKQRNARRLAMICGGSGITPMYQIIQAVLRDQPE-DHTEMHLVYANRTEDDILLRDELDRWAAEYPDRL- 198 (270)
T ss_dssp CCSSSCEEETTEEECCSEEEEEEEGGGHHHHHHHHHHHHHTTTT-CCCEEEEEEEESCGGGCTTHHHHHHHHHHCTTTE-
T ss_pred eccccceeccCCcccCCEEEEEeccccHHHHHHHHHHHHhcCCC-CCcEEEEEEEcCCHHHcchHHHHHHHHHHCcCcE-
Confidence 55552 468999999999999999999998875210 1278999999999999999999999987654 57
Q ss_pred ccCCCeEEEEEccC---CC----CcccchhhHHHcHHHHHHhhcCCCEEEEeCCCCchHHH-HHHHHHH
Q 013425 351 EAKGGGFYVAFSRK---QP----QKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSD-VWSTFEE 411 (443)
Q Consensus 351 ~~~~~~~~~a~Sr~---~~----~k~yVqd~l~~~~~~l~~~l~~~~~iyvCG~~~~M~~~-V~~~L~~ 411 (443)
+++.++|++ ++ .++||++.+.+. +......++.+|+|||+ .|.++ +++.|.+
T Consensus 199 -----~~~~~~s~~~~~~~~~~~~~g~v~~~~l~~---~l~~~~~~~~vyvCGp~-~m~~~~~~~~L~~ 258 (270)
T 2cnd_A 199 -----KVWYVIDQVKRPEEGWKYSVGFVTEAVLRE---HVPEGGDDTLALACGPP-PMIQFAISPNLEK 258 (270)
T ss_dssp -----EEEEEESCCSCGGGCCCSEESSCCHHHHHH---HSCCCSSSEEEEEECCH-HHHHTTTHHHHHT
T ss_pred -----EEEEEECCCCCCCCCcccccccCCHHHHHH---hcCCCcCCEEEEEECCH-HHHHHHHHHHHHH
Confidence 888999883 11 367888764321 11111125689999998 89886 4666653
No 30
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B*
Probab=99.92 E-value=9.6e-26 Score=218.01 Aligned_cols=169 Identities=18% Similarity=0.227 Sum_probs=136.9
Q ss_pred CCHHHHHHhcCC---CCcceeecCCCCCCCCCeEEEEEEEEEecCCCCcccCCcccccccCCCCCCCcEEEEEeecCC-C
Q 013425 206 MPIDWLVQLVPP---LKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIPAWFQKGS-L 281 (443)
Q Consensus 206 ~p~~~ll~~lp~---~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~~~G~~v~i~~~~g~-F 281 (443)
.|+|++...+|. ..+|+|||+|+|.. .+.++|+|+. .+.|.+|+||.++++ ||.|.+.+|.|. |
T Consensus 35 ~pGQ~v~l~~~~~~~~~~R~ySi~s~~~~-~~~l~~~vk~---------~~~G~~S~~l~~l~~--Gd~v~v~gP~G~~f 102 (262)
T 1ep3_B 35 LPGQFLHLAVPNGAMLLRRPISISSWDKR-AKTCTILYRI---------GDETTGTYKLSKLES--GAKVDVMGPLGNGF 102 (262)
T ss_dssp STTCEEEECCSCTTCCSCEEEECCEEETT-TTEEEEEEEC---------CCTTSHHHHHHTCCT--TCEEEEEEEESBCC
T ss_pred CCCceEEEEcCCCCceeeEEEEeeeecCC-CCEEEEEEEE---------ecCCchHHHHhcCCC--CCEEEEEcccCCCc
Confidence 478887766664 68999999999853 5889999943 347999999999999 999999999997 9
Q ss_pred CCCC--CCCCeEEEeCCccchhHHHHHHHHHHhcCCCCCCCEEEEEeecCCccccCHHHHHHhhhcCCCccccCCCeEEE
Q 013425 282 PRPP--PSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYV 359 (443)
Q Consensus 282 ~lp~--~~~piImIa~GTGIAPfrs~lq~~~~~~~~~~~~~~~L~~G~R~~~d~ly~~el~~~~~~~g~l~~~~~~~~~~ 359 (443)
.++. ...|++|||+|||||||+++++++.... .+++|+||+|+++|++|++||+++... ++++
T Consensus 103 ~l~~~~~~~~~lliagGtGitP~~s~l~~l~~~~-----~~v~l~~~~r~~~~~~~~~el~~l~~~----------~~~~ 167 (262)
T 1ep3_B 103 PVAEVTSTDKILIIGGGIGVPPLYELAKQLEKTG-----CQMTILLGFASENVKILENEFSNLKNV----------TLKI 167 (262)
T ss_dssp CCTTCCTTSEEEEEEEGGGSHHHHHHHHHHHHHT-----CEEEEEEEESSGGGCCCHHHHHTSTTE----------EEEE
T ss_pred cCCCccCCCeEEEEECcCcHHHHHHHHHHHHHcC-----CeEEEEEEcCCHHHhhhHHHHhhhccC----------cEEE
Confidence 9984 4789999999999999999999988753 689999999999999999999986532 2333
Q ss_pred EEccCC--CCcccchhhHHHcHHHHHHhhcCCCEEEEeCCCCchHHHHHHHHHH
Q 013425 360 AFSRKQ--PQKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEE 411 (443)
Q Consensus 360 a~Sr~~--~~k~yVqd~l~~~~~~l~~~l~~~~~iyvCG~~~~M~~~V~~~L~~ 411 (443)
+ +++. ..++||++.+.+. +.+++.+|+|||+ .|.+++++ |.+
T Consensus 168 ~-~~~~~~~~~g~v~~~l~~~-------~~~~~~vyvCGp~-~m~~~v~~-l~~ 211 (262)
T 1ep3_B 168 A-TDDGSYGTKGHVGMLMNEI-------DFEVDALYTCGAP-AMLKAVAK-KYD 211 (262)
T ss_dssp E-ETTCSSSEESCHHHHHHHC-------CSCCSEEEEESCH-HHHHHHHH-HTT
T ss_pred E-ECCCCCcceeehHHHHHhh-------ccCCCEEEEECCH-HHHHHHHH-HHh
Confidence 3 3433 2467888866543 3457899999998 99999987 654
No 31
>1cqx_A Flavohemoprotein; globin fold, six-stranded antiparallel beta sheet, helix-FLA five-stranded parallel beta sheet, lipid binding protein; HET: HEM FAD DGG; 1.75A {Cupriavidus necator} SCOP: a.1.1.2 b.43.4.2 c.25.1.5 PDB: 3ozu_A* 3ozv_B* 3ozw_A*
Probab=99.92 E-value=2.4e-25 Score=228.10 Aligned_cols=181 Identities=18% Similarity=0.277 Sum_probs=144.4
Q ss_pred CCHHHHHHhcC--C---CCcceeecCCCCCCCCCeEEEEEEEEEecCCCCcccCCccccccc-CCCCCCCcEEEEEeecC
Q 013425 206 MPIDWLVQLVP--P---LKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLA-GLDPQQGIYIPAWFQKG 279 (443)
Q Consensus 206 ~p~~~ll~~lp--~---~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~-~l~~~~G~~v~i~~~~g 279 (443)
.|||++...+| . ..+|+|||+|+|. .+.++|+|+++.. ...+.|.+|+||+ ++++ ||.|.+.+|.|
T Consensus 186 ~pGQ~v~l~~~~~~~~~~~~R~YSi~s~p~--~~~~~i~Vk~~~~----~~~~~G~~S~~L~~~l~~--Gd~v~v~gP~G 257 (403)
T 1cqx_A 186 EPGQYTSVAIDVPALGLQQIRQYSLSDMPN--GRTYRISVKREGG----GPQPPGYVSNLLHDHVNV--GDQVKLAAPYG 257 (403)
T ss_dssp CTTCEEEEEEEETTTTEEEEEEEECCSCCC--SSCEEEEEECCCB----TTBCCCHHHHHHHHHCCT--TCEEEECCCBC
T ss_pred CCCCEEEEEEecCCCCcceeecceecCCCC--CCeEEEEEEECCC----CCCCCCeehHHHhhCCCC--CCEEEEecCcc
Confidence 58998876665 2 3479999999985 4789999965310 1123699999999 5999 99999999999
Q ss_pred CCCCC-CCCCCeEEEeCCccchhHHHHHHHHHHhcCCCCCCCEEEEEeecCCccccCHHHHHHhhhcCCCccccCCCeEE
Q 013425 280 SLPRP-PPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFY 358 (443)
Q Consensus 280 ~F~lp-~~~~piImIa~GTGIAPfrs~lq~~~~~~~~~~~~~~~L~~G~R~~~d~ly~~el~~~~~~~g~l~~~~~~~~~ 358 (443)
.|.++ +..+|+||||+|||||||+++++++.. ... .+++|+||+|+.+|++|++||+++.+.++++ +++
T Consensus 258 ~f~l~~~~~~~~vlIagGtGitP~~s~l~~l~~-~~~---~~v~l~~~~r~~~~~~~~~el~~l~~~~~~~------~~~ 327 (403)
T 1cqx_A 258 SFHIDVDAKTPIVLISGGVGLTPMVSMLKVALQ-APP---RQVVFVHGARNSAVHAMRDRLREAAKTYENL------DLF 327 (403)
T ss_dssp SCSCCTTCCSCEEEEESSCCHHHHHHHHHHHTC-SSC---CCEEEEEEESCSSSCHHHHHHHHHHHHCTTE------EEE
T ss_pred CcccCCCCCCCEEEEEecccHhhHHHHHHHHHh-CCC---CcEEEEEEeCChhhCcHHHHHHHHHHhCCCc------EEE
Confidence 99997 678899999999999999999999876 333 7899999999999999999999998876778 899
Q ss_pred EEEccCCCC---------cccchhh-HHHcHHHHHHhhcCCCEEEEeCCCCchHHHHHHHHHH
Q 013425 359 VAFSRKQPQ---------KVYVQHK-MLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEE 411 (443)
Q Consensus 359 ~a~Sr~~~~---------k~yVqd~-l~~~~~~l~~~l~~~~~iyvCG~~~~M~~~V~~~L~~ 411 (443)
+++|++++. .++++.. +.+. + .+ .++.+|+|||+ .|.++|++.|.+
T Consensus 328 ~~~s~~~~~~~~~~~~~~~G~i~~~~l~~~---~--~~-~~~~vyvCGp~-~m~~~v~~~L~~ 383 (403)
T 1cqx_A 328 VFYDQPLPEDVQGRDYDYPGLVDVKQIEKS---I--LL-PDADYYICGPI-PFMRMQHDALKN 383 (403)
T ss_dssp EEESSCCTTCCBTTTBSEESSCCGGGSHHH---H--CC-TTCEEEEESSH-HHHHHHHHHHHH
T ss_pred EEECCCCcccccccccCcCCCcCHHHHhhc---c--CC-CCCEEEEeCCH-HHHHHHHHHHHH
Confidence 999987542 2345432 2211 0 22 37899999998 999999987764
No 32
>2pia_A Phthalate dioxygenase reductase; HET: FMN; 2.00A {Burkholderia cepacia} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=99.91 E-value=8.8e-25 Score=217.57 Aligned_cols=172 Identities=13% Similarity=0.195 Sum_probs=139.5
Q ss_pred CCHHHHHHhcCCCCcceeecCCCCCCCCCeEEEEEEEEEecCCCCcccCCc-cccccc-CCCCCCCcEEEEEeecCCCCC
Q 013425 206 MPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGL-CSVWLA-GLDPQQGIYIPAWFQKGSLPR 283 (443)
Q Consensus 206 ~p~~~ll~~lp~~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~-~S~~L~-~l~~~~G~~v~i~~~~g~F~l 283 (443)
.|+||+...+|....|+|||+|+|.. .+.++|+|+ +...|. +|+||. ++++ |+.|.+.+|.|.|.+
T Consensus 40 ~pGQ~v~l~~~~g~~R~ySi~s~~~~-~~~l~i~Vk---------~~~~G~g~S~~L~~~l~~--Gd~v~v~gP~g~f~l 107 (321)
T 2pia_A 40 EAGANLTVAVPNGSRRTYSLCNDSQE-RNRYVIAVK---------RDSNGRGGSISFIDDTSE--GDAVEVSLPRNEFPL 107 (321)
T ss_dssp CTTCEEEEECTTSCEEEEECCSCTTC-CSEEEEEEE---------CCTTSCSHHHHHHHSCCT--TCEEEECCCBCCSCC
T ss_pred CCCCEEEEECCCCCcEEEEeCCCCCC-CCeEEEEEE---------EecCCcchhHHHHhcCCC--CCEEEEeCCcccccc
Confidence 58998877777778999999999853 578999994 345687 899999 8999 999999999999999
Q ss_pred CCCCCCeEEEeCCccchhHHHHHHHHHHhcCCCCCCCEEEEEeecCCccccCHHHHHHhhhcCCCccccCCCeEEEEEcc
Q 013425 284 PPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSR 363 (443)
Q Consensus 284 p~~~~piImIa~GTGIAPfrs~lq~~~~~~~~~~~~~~~L~~G~R~~~d~ly~~el~~~~~~~g~l~~~~~~~~~~a~Sr 363 (443)
+....+++|||+|||||||++|+++....+ . .+++|+||+|+++|++|.+||+++... .++ .+.+++
T Consensus 108 ~~~~~~~vliagG~GItP~~s~l~~l~~~~-~---~~v~l~~~~r~~~~~~~~~el~~l~~~-~~~--------~~~~~~ 174 (321)
T 2pia_A 108 DKRAKSFILVAGGIGITPMLSMARQLRAEG-L---RSFRLYYLTRDPEGTAFFDELTSDEWR-SDV--------KIHHDH 174 (321)
T ss_dssp CTTCSEEEEEEEGGGHHHHHHHHHHHHHHC-S---SEEEEEEEESCGGGCTTHHHHHSTTTT-TTE--------EEEECT
T ss_pred CCCCCCEEEEEecccHhHHHHHHHHHHHcC-C---CcEEEEEEECChhhhHHHHHHhcCccC-CeE--------EEEECC
Confidence 854789999999999999999999988764 2 589999999999999999999988622 334 455666
Q ss_pred CCC-CcccchhhHHHcHHHHHHhhcCCCEEEEeCCCCchHHHHHHHHHH
Q 013425 364 KQP-QKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEE 411 (443)
Q Consensus 364 ~~~-~k~yVqd~l~~~~~~l~~~l~~~~~iyvCG~~~~M~~~V~~~L~~ 411 (443)
+.. .+.++++++.+ ...+..+|+|||+ .|.++|++.|.+
T Consensus 175 ~~~~g~~~~~~ll~~--------~~~~~~vyvCGP~-~m~~~v~~~l~~ 214 (321)
T 2pia_A 175 GDPTKAFDFWSVFEK--------SKPAQHVYCCGPQ-ALMDTVRDMTGH 214 (321)
T ss_dssp TCTTSCCCHHHHHSS--------CCTTEEEEEESCH-HHHHHHHHHTTT
T ss_pred CcccCccCHHHHhcc--------cCCCCEEEEECCH-HHHHHHHHHHHh
Confidence 532 34555554432 2347899999998 999999988876
No 33
>2gpj_A Siderophore-interacting protein; structural genomics, joint for structural genomics, JCSG; HET: FAD; 2.20A {Shewanella putrefaciens}
Probab=99.79 E-value=3.3e-20 Score=178.39 Aligned_cols=166 Identities=11% Similarity=0.047 Sum_probs=121.7
Q ss_pred CCCHHHHHHhcCC----CCcceeecCCCCCCCCCeEEEEEEEEEecCCCCcccC-CcccccccCCCCCCCcEEEEEeecC
Q 013425 205 QMPIDWLVQLVPP----LKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRT-GLCSVWLAGLDPQQGIYIPAWFQKG 279 (443)
Q Consensus 205 ~~p~~~ll~~lp~----~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~-G~~S~~L~~l~~~~G~~v~i~~~~g 279 (443)
..|+|++...+|. ...|+|||+|.+. +.++|.|.+ ... |.+|+||.++++ ||.|.+.+|.|
T Consensus 39 ~~pGQ~v~l~~~~~~~~~~~R~YSi~~~~~---~~~~i~~~~---------~~~~G~~S~~l~~l~~--Gd~l~v~gP~G 104 (252)
T 2gpj_A 39 DQESAYIKLLFPQAGERPLMRTYTIRQQRD---DEIDVDFVL---------HDTDGPASSWAKTAQV--GELIQIGGPGL 104 (252)
T ss_dssp CCTTCEEEEEECCTTSCCEEEEEECCEEET---TEEEEEEEC---------CSSCCHHHHHHHHCCT--TCEEEEEEEEC
T ss_pred CCCCCeEEEEcccCCCCCCCCceeeeccCC---CEEEEEEEE---------eCCCCcHHHHHhhCCC--CCEEEEecCCC
Confidence 4689998777774 4679999999763 677777743 233 899999999999 99999999999
Q ss_pred CCCCCCCCCCeEEEeCCccchhHHHHHHHHHHhcCCCCCCCEEEEEeecCCccccCHHHHHHhhhcCCCccccCCCeEEE
Q 013425 280 SLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYV 359 (443)
Q Consensus 280 ~F~lp~~~~piImIa~GTGIAPfrs~lq~~~~~~~~~~~~~~~L~~G~R~~~d~ly~~el~~~~~~~g~l~~~~~~~~~~ 359 (443)
.|.++....+++|||+||||||+++++++... . .++.+|+++|+.+|.+.. ... ..+ +++.
T Consensus 105 ~f~l~~~~~~~lliagGtGitPi~s~l~~l~~---~---~~~~~~~~~~~~~d~~~l------~~~-~~~------~v~~ 165 (252)
T 2gpj_A 105 KKLINFEADWFLLAGDMTALPAISVNLAKLPN---N---AVGYAVIEVLSEADIQPL------VHP-EHV------ELHW 165 (252)
T ss_dssp CCCCCSSSSEEEEEEEGGGHHHHHHHHHHSCT---T---CEEEEEEEESSGGGCCCC------CCC-TEE------EEEE
T ss_pred CCcCCCCCceEEEEcchhhHHHHHHHHHhCCC---C---CcEEEEEEECCHHHhhcc------cCC-CCc------EEEE
Confidence 99998445799999999999999999998732 2 578899999998765432 111 345 6776
Q ss_pred EEccCCCC-cccchhhHHHcHHHHHHhh-cCCCEEEEeCCCCchHHHHHHHHH
Q 013425 360 AFSRKQPQ-KVYVQHKMLEQSQRIWNLL-LSKASIYVAGSATKMPSDVWSTFE 410 (443)
Q Consensus 360 a~Sr~~~~-k~yVqd~l~~~~~~l~~~l-~~~~~iyvCG~~~~M~~~V~~~L~ 410 (443)
+++.+... ...+.+.+.+. .+ ..+.++|+|||+ .|++++++.|.
T Consensus 166 ~~~~~~~~~g~~~~~~l~~~------~~~~~~~~vy~CGP~-~m~~av~~~l~ 211 (252)
T 2gpj_A 166 VINPEADPEGRPLVERIAQL------PWLAGEPAVWIACEF-NSMRALRRHFK 211 (252)
T ss_dssp EECSSCCTTCHHHHHHHTTS------CCCSSCEEEEEEEEH-HHHHHHHHHHH
T ss_pred EeCCCCCcccHHHHHHHHhc------cCCCCCcEEEEEcCH-HHHHHHHHHHH
Confidence 76654321 11233322211 01 136789999998 99999998886
No 34
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=99.76 E-value=9e-19 Score=156.80 Aligned_cols=126 Identities=10% Similarity=0.009 Sum_probs=86.1
Q ss_pred CCCCCCcE-EEEEeecCCCCCCCCCCCeEEEeCCccchhHHHHHHHHHHhcCCCCCCCEEEEEeecCCccccCHHHHHHh
Q 013425 264 LDPQQGIY-IPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSH 342 (443)
Q Consensus 264 l~~~~G~~-v~i~~~~g~F~lp~~~~piImIa~GTGIAPfrs~lq~~~~~~~~~~~~~~~L~~G~R~~~d~ly~~el~~~ 342 (443)
+++ ||+ +.+.+|.|+|...+..+|++|||+||||||+++++++....+ .+++|+ |+|+++|.+|++||+++
T Consensus 1 L~~--Gd~vl~v~gP~G~~f~~~~~~~~llIaGG~GItPl~sm~~~l~~~~-----~~v~l~-g~r~~~d~~~~~el~~l 72 (158)
T 3lrx_A 1 MKE--GDSLLNVAGPLGTPVPMEKFGKILAIGAYTGIVEVYPIAKAWQEIG-----NDVTTL-HVTFEPMVILKEELEKA 72 (158)
T ss_dssp -------------CCCCCCBCCCCCSEEEEEEETTHHHHHHHHHHHHHHHT-----CEEEEE-EECBGGGCCSHHHHHHH
T ss_pred CcC--CCEeeEEECCCCCCCccCCCCeEEEEEccCcHHHHHHHHHHHHhcC-----CcEEEE-EeCCHHHhhHHHHHHHH
Confidence 457 999 599999998654445689999999999999999999987653 579999 99999999999999998
Q ss_pred hhcCCCccccCCCeEEEEEccCCC--------CcccchhhHHHcHHHHHHhhcCCCEEEEeCCCCchHHHHHHHHHHH
Q 013425 343 SLNDGVFSEAKGGGFYVAFSRKQP--------QKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEI 412 (443)
Q Consensus 343 ~~~~g~l~~~~~~~~~~a~Sr~~~--------~k~yVqd~l~~~~~~l~~~l~~~~~iyvCG~~~~M~~~V~~~L~~i 412 (443)
..+ + .+..+++++.. .+++|++.+.+... + .+...||+|||+ .|.+++.+.+.+.
T Consensus 73 ~~~---~------~~~~v~~~~~~~~~~~~~g~~G~v~~~l~~~l~---~--~~~~~vy~CGP~-~mm~~v~~~l~~~ 135 (158)
T 3lrx_A 73 VTR---H------IVEPVPLNPNQDFLANMKNVSQRLKEKVRELLE---S--EDWDLVFMVGPV-GDQKQVFEVVKEY 135 (158)
T ss_dssp SSE---E------EECCBCCCTTSCHHHHHHHHHHHHHHHHHHHHH---H--SCCSEEEEESCH-HHHHHHHHHHGGG
T ss_pred Hhc---e------EEEEeeccccccCCCCCCCCcccccHHHHHhhc---c--CCCCEEEEECCH-HHHHHHHHHHHHc
Confidence 643 3 33323333211 25677765543221 1 146789999998 9999998777654
No 35
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=99.71 E-value=1.8e-17 Score=145.77 Aligned_cols=120 Identities=10% Similarity=-0.009 Sum_probs=87.0
Q ss_pred EEEEeecCCCCCCCCCCCeEEEeCCccchhHHHHHHHHHHhcCCCCCCCEEEEEeecCCccccCHHHHHHhhhcCCCccc
Q 013425 272 IPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSE 351 (443)
Q Consensus 272 v~i~~~~g~F~lp~~~~piImIa~GTGIAPfrs~lq~~~~~~~~~~~~~~~L~~G~R~~~d~ly~~el~~~~~~~g~l~~ 351 (443)
+.+.+|.|.|...+..++++|||+||||||+++++++....+ .++.|+ |+|+++|.+|++||+++.++ +
T Consensus 3 ~~v~GP~G~~~~~~~~~~~llIaGG~GiaPl~sm~~~l~~~~-----~~v~l~-g~R~~~~~~~~~el~~l~~~---~-- 71 (142)
T 3lyu_A 3 LNVAGPLGTPVPMEKFGKILAIGAYTGIVEVYPIAKAWQEIG-----NDVTTL-HVTFEPMVILKEELEKAVTR---H-- 71 (142)
T ss_dssp ----CCCSCCBCCCCCSEEEEEEETTHHHHHHHHHHHHHHTT-----CEEEEE-EEEEGGGCCSHHHHHTTSSE---E--
T ss_pred eeeeCCCCCCccCCCCCeEEEEECcCcHHHHHHHHHHHHhcC-----CcEEEE-EeCCHHHhhHHHHHHHHHhh---e--
Confidence 468899998776544689999999999999999999987643 579999 99999999999999987643 3
Q ss_pred cCCCeEEEEEccCCC--------CcccchhhHHHcHHHHHHhhcCCCEEEEeCCCCchHHHHHHHHHHH
Q 013425 352 AKGGGFYVAFSRKQP--------QKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEI 412 (443)
Q Consensus 352 ~~~~~~~~a~Sr~~~--------~k~yVqd~l~~~~~~l~~~l~~~~~iyvCG~~~~M~~~V~~~L~~i 412 (443)
.+..+++++.. .+++|++.+.+... . .+...||+|||+ .|.+.|.+.+.+.
T Consensus 72 ----~~~~~~~~~~~~~~d~~~g~~G~v~~~l~~~~~----~-~~~~~vy~CGP~-~Mm~av~~~l~~~ 130 (142)
T 3lyu_A 72 ----IVEPVPLNPNQDFLANMKNVSQRLKEKVRELLE----S-EDWDLVFMVGPV-GDQKQVFEVVKEY 130 (142)
T ss_dssp ----EEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHH----S-SCCSEEEEESCH-HHHHHHHHHHHHH
T ss_pred ----EEEEeecccccCCCCCCCCCccchhHHHHHhcc----c-CCCCEEEEECCH-HHHHHHHHHHHHc
Confidence 44444444321 25666665543211 1 135689999998 9999999877764
No 36
>3a1f_A Cytochrome B-245 heavy chain; GP91(PHOX), NADPH binding domain, oxidoreductase; 2.00A {Homo sapiens}
Probab=99.70 E-value=4.3e-18 Score=154.65 Aligned_cols=134 Identities=13% Similarity=0.231 Sum_probs=92.7
Q ss_pred EEEeecCCCCCC-CCCCCeEEEeCCccchhHHHHHHHHHHhcC----CCCCCCEEEEEeecCCcccc-CHHHHHHhhhcC
Q 013425 273 PAWFQKGSLPRP-PPSVPLILIGPGTGCAPFRGFVEERAIQSS----SGPAAPIIFFFGCRNEDDFL-YRELWLSHSLND 346 (443)
Q Consensus 273 ~i~~~~g~F~lp-~~~~piImIa~GTGIAPfrs~lq~~~~~~~----~~~~~~~~L~~G~R~~~d~l-y~~el~~~~~~~ 346 (443)
.|.+|.|.|.++ ....++||||+|||||||+++++++..... .....+++|+||+|+.++++ |++||+++.+.+
T Consensus 2 ~v~GP~G~~~~~~~~~~~~vlIagG~GItP~~s~l~~l~~~~~~~~~~~~~~~v~l~~~~r~~~~~~w~~~~l~~l~~~~ 81 (186)
T 3a1f_A 2 AVDGPFGTASEDVFSYEVVMLVGAGIGVTPFASILKSVWYKYCNNATNLKLKKIYFYWLCRDTHAFEWFADLLQLLESQM 81 (186)
T ss_dssp CTTSTTSHHHHHHTTSSEEEEEEEGGGHHHHHHHHHHHHHHHHHCTTCCCCCEEEEEEEESCTTTTHHHHHHHHHHHHHH
T ss_pred eEECCCCCCccChhhCCeEEEEecCccHHHHHHHHHHHHHHHhhcccCCCCcEEEEEEEECCcchHHHHHHHHHHHHHHH
Confidence 356788888765 566899999999999999999999877531 00127899999999999888 999999998752
Q ss_pred ------CCccccCCCeEEEEEccCCC---Ccccchh-----hHH--------------HcHHHHHHhhc-CCCEEEEeCC
Q 013425 347 ------GVFSEAKGGGFYVAFSRKQP---QKVYVQH-----KML--------------EQSQRIWNLLL-SKASIYVAGS 397 (443)
Q Consensus 347 ------g~l~~~~~~~~~~a~Sr~~~---~k~yVqd-----~l~--------------~~~~~l~~~l~-~~~~iyvCG~ 397 (443)
+++ ++++.+|++.. .+.|++. .+. ...+.+.+... .+..||+|||
T Consensus 82 ~~~~~~~~~------~~~~~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~gR~~~~~~~~~~~~~~~~~~~~v~~CGP 155 (186)
T 3a1f_A 82 QERNNAGFL------SYNIYLTGWDESQANHFAVHHDEEKDVITGLKQKTLYGRPNWDNEFKTIASQHPNTRIGVFLCGP 155 (186)
T ss_dssp HHTTCTTSE------EEEEEETTC-----------------------CCEEESCCCHHHHHHHHHHHSTTCEEEEEEESC
T ss_pred hhccCCCeE------EEEEEEcCCCCCcccceeeccccccccCCCCccccccCCCCHHHHHHHHHHhCCCCcEEEEEeCC
Confidence 367 88899998632 1122221 000 00111222222 3678999999
Q ss_pred CCchHHHHHHHHHHHH
Q 013425 398 ATKMPSDVWSTFEEIV 413 (443)
Q Consensus 398 ~~~M~~~V~~~L~~i~ 413 (443)
+ .|.++|++++.+..
T Consensus 156 ~-~m~~~v~~~l~~~g 170 (186)
T 3a1f_A 156 E-ALAETLSKQSISNS 170 (186)
T ss_dssp H-HHHHHHHHHHHHTC
T ss_pred H-HHHHHHHHHHHHhh
Confidence 8 99999998887753
No 37
>3lo8_A Ferredoxin--NADP reductase; electron transport, oxidoreductase, FAD, flavoprotein; HET: FAD; 1.05A {Zea mays} PDB: 3lvb_A* 1jb9_A*
Probab=82.41 E-value=4.1 Score=38.85 Aligned_cols=62 Identities=11% Similarity=0.177 Sum_probs=45.5
Q ss_pred hhhccCCCCCCCCccccCccce-eEEEeeeecCCCCCCcEEEEEEEecCCCcccCCCCEEEEccCC
Q 013425 26 ETARSMSAGKLSNYNNKAVCFL-KMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQ 90 (443)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~Lt~~~~~~~v~~i~l~~~~~~~~y~~GD~l~I~p~N 90 (443)
+|++..+.. .+.......+. +|++.+.+++.+...++++++|..+ ....|+||.++.|..+.
T Consensus 11 ~l~~~~~~~--~~~~~~~~~~~~~V~~~~~~t~~~~~~~v~~~~l~~~-~~~~~~pGQ~v~l~~~~ 73 (311)
T 3lo8_A 11 HLESAKEPP--LNTYKPKEPFTATIVSVESLVGPKAPGETCHIVIDHG-GNVPYWEGQSYGVIPPG 73 (311)
T ss_dssp GGGCCSSCC--CCSBBTTBCEEEEEEEEEECSCTTSSSCEEEEEEECT-TSSCCCTTCEEEEECSS
T ss_pred chhhcccCC--ccccCCCCCeEEEEEeeEeccCCCCCCccEEEEEeCC-CCCcccCCCEEEEeCCC
Confidence 444444433 33344445566 9999999997666678999999987 46899999999998764
No 38
>2r6h_A NADH:ubiquinone oxidoreductase, Na translocating, subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: FAD; 2.95A {Porphyromonas gingivalis}
Probab=50.66 E-value=23 Score=32.86 Aligned_cols=44 Identities=9% Similarity=0.244 Sum_probs=34.4
Q ss_pred cCccce-eEEEeeeecCCCCCCcEEEEEEEecC-CCcccCCCCEEEEccCC
Q 013425 42 KAVCFL-KMIKNQPLTKSGSGKDVHHFEFEFVS-AAIEYEVGDVLEILPSQ 90 (443)
Q Consensus 42 ~~~~~~-~v~~~~~Lt~~~~~~~v~~i~l~~~~-~~~~y~~GD~l~I~p~N 90 (443)
.+..+. +|++++.+++ ++++++|..++ ..+.|+||.++.|..+.
T Consensus 6 ~~~~~~~~V~~~~~~t~-----~~~~l~l~~~~~~~~~~~pGQ~v~l~~p~ 51 (290)
T 2r6h_A 6 GVKEWECEVLSNKNVST-----FIKEFVVKLPEGETMNFKSGSYAQIKIPK 51 (290)
T ss_dssp CCCEEEEEEEEEEESSS-----SEEEEEEECSTTCCCCCCTTCEEEEEECS
T ss_pred cceEEEEEEEEeeecCC-----CeEEEEEEcCCCCccccCCCceEEEEccc
Confidence 344455 9999999884 68999999873 36789999999997654
No 39
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=46.97 E-value=16 Score=35.46 Aligned_cols=27 Identities=19% Similarity=0.282 Sum_probs=22.0
Q ss_pred CCCeEEEeCCcc--chhHHHHHHHHHHhc
Q 013425 287 SVPLILIGPGTG--CAPFRGFVEERAIQS 313 (443)
Q Consensus 287 ~~piImIa~GTG--IAPfrs~lq~~~~~~ 313 (443)
++.|++.|+||| |-|.+++.++...++
T Consensus 2 ~~~i~i~~GGTgGHi~palala~~L~~~g 30 (365)
T 3s2u_A 2 KGNVLIMAGGTGGHVFPALACAREFQARG 30 (365)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHHTT
T ss_pred CCcEEEEcCCCHHHHHHHHHHHHHHHhCC
Confidence 357888999997 889999999987753
No 40
>1w78_A FOLC bifunctional protein; DHFS, dihydrofolate synthase, synthase, ATP-binding, folate biosynthesis, ligase, multifunctional enzyme; HET: KCX PD8 ADP; 1.82A {Escherichia coli} PDB: 1w7k_A*
Probab=44.32 E-value=2.1e+02 Score=28.05 Aligned_cols=107 Identities=9% Similarity=0.120 Sum_probs=58.1
Q ss_pred CeEEEeCCccchhHHHHHHHHHHhcCCCCCCCEEEEEeecCCccccCHHHHHHhhhcCCCccccCCCeEEEEEccCCCC-
Q 013425 289 PLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQ- 367 (443)
Q Consensus 289 piImIa~GTGIAPfrs~lq~~~~~~~~~~~~~~~L~~G~R~~~d~ly~~el~~~~~~~g~l~~~~~~~~~~a~Sr~~~~- 367 (443)
+.+++=.++=-.-+.+.++........ ++++++||+....|+ ++.++.+.+ .+. .++ ++.-+.+.
T Consensus 297 ~~~i~D~Ahnp~s~~~~l~~l~~~~~~---~~~i~V~g~~~~kd~--~~~~~~l~~---~~d-----~vi-~~~~~~~r~ 362 (422)
T 1w78_A 297 PRVIFDVAHNPHAAEYLTGRMKALPKN---GRVLAVIGMLHDKDI--AGTLAWLKS---VVD-----DWY-CAPLEGPRG 362 (422)
T ss_dssp TEEEEECCCSHHHHHHHHHHHHHSCSC---SCEEEEECCBTTSCH--HHHHHHHHT---TCS-----EEE-ECCCCSSSB
T ss_pred CeEEEECCCCHHHHHHHHHHHHHhCCC---CCEEEEEeccCCCCH--HHHHHHHHh---hCC-----EEE-EECCCCCCC
Confidence 556666666666678877776543223 689999998554464 444444432 242 333 33221110
Q ss_pred -----------c-ccchhhHHHcHHHHHHhhcCCCEEEEeCCCCchHHHHHHHHHH
Q 013425 368 -----------K-VYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEE 411 (443)
Q Consensus 368 -----------k-~yVqd~l~~~~~~l~~~l~~~~~iyvCG~~~~M~~~V~~~L~~ 411 (443)
+ .++.+ +.+..+.+.+...++..|.+||+- .|..++++.|.+
T Consensus 363 ~~~~~l~~~~~~~~~~~~-~~~ai~~a~~~~~~~d~vLv~GS~-~~~~~~~~~l~~ 416 (422)
T 1w78_A 363 ATAEQLLEHLGNGKSFDS-VAQAWDAAMADAKAEDTVLVCGSF-HTVAHVMEVIDA 416 (422)
T ss_dssp CCHHHHHHHHSSCEECSS-HHHHHHHHHHHCCTTCEEEEESSH-HHHHHHHHHHHH
T ss_pred CCHHHHHHHHhhcccCCC-HHHHHHHHHHhcCCCCEEEEEeeH-HHHHHHHHHHHh
Confidence 0 01111 222223333444568899999996 777777765544
No 41
>3nrs_A Dihydrofolate:folylpolyglutamate synthetase; structural genomics, center for structural genomics of infec diseases, csgid; HET: TLA MES; 1.80A {Yersinia pestis} PDB: 3n2a_A* 3pyz_A* 3qcz_A*
Probab=41.96 E-value=1.7e+02 Score=29.08 Aligned_cols=106 Identities=14% Similarity=0.139 Sum_probs=58.4
Q ss_pred CCeEEEeCCccchhHHHHHHHHH------HhcCCCCCCCEEEEEeecCCccccCHHHHHHhhhcCCCccccCCCeEEEEE
Q 013425 288 VPLILIGPGTGCAPFRGFVEERA------IQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAF 361 (443)
Q Consensus 288 ~piImIa~GTGIAPfrs~lq~~~------~~~~~~~~~~~~L~~G~R~~~d~ly~~el~~~~~~~g~l~~~~~~~~~~a~ 361 (443)
.|.+++=.+.=-.-+.++++... ..... ++++++||+-...|+ ++-++.+.. .+. .++ ++
T Consensus 311 ~~~vi~D~AHNp~a~~all~~l~~~~~~~~~~~~---~r~i~V~G~~~dkd~--~~~~~~l~~---~~~-----~v~-~~ 376 (437)
T 3nrs_A 311 QPLLILDVAHNPHAARYLVNRLAQVINPVNASKQ---GKVRAVVGMLSDKDI--AGTLACLSE---RVD-----EWY-CA 376 (437)
T ss_dssp TTEEEECCCCSHHHHHHHHHHHHHTC-----------CCEEEEECCBTTBCH--HHHHHHHTT---TCC-----EEE-EC
T ss_pred CCeEEEECCCCHHHHHHHHHHHHhhcchhhhcCC---CCEEEEEeCCCCCCH--HHHHHHHHh---cCC-----EEE-Ee
Confidence 36677776666667888877765 32222 689999998764464 555555543 342 333 33
Q ss_pred ccCCCC------------c-ccchhhHHHcHHHHHHhhcCCCEEEEeCCCCchHHHHHHHH
Q 013425 362 SRKQPQ------------K-VYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTF 409 (443)
Q Consensus 362 Sr~~~~------------k-~yVqd~l~~~~~~l~~~l~~~~~iyvCG~~~~M~~~V~~~L 409 (443)
.-+.+. . .++.+ +.+..+.+.+...++..|.|||+- -|+.++++.+
T Consensus 377 ~~~~~r~~~~~~l~~~~~~~~~~~d-~~~Ai~~a~~~a~~~D~VLv~GS~-~~v~~~~~~~ 435 (437)
T 3nrs_A 377 PLEGPRGASAGQLAEHLVSARQFSD-VETAWRQAMQDADTQDVVIVCGSF-HTVAHVMAAL 435 (437)
T ss_dssp CCSSTTBCCHHHHHTTCSSCEECSS-HHHHHHHHHHHCCTTCEEEEESSH-HHHHHHHHHT
T ss_pred CCCCCCCCCHHHHHHHHhhCCCcCC-HHHHHHHHHHhcCCCCeEEEEehH-HHHHHHHHHh
Confidence 322210 0 11111 222223333444568899999997 8887777543
No 42
>2pia_A Phthalate dioxygenase reductase; HET: FMN; 2.00A {Burkholderia cepacia} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=34.05 E-value=66 Score=30.48 Aligned_cols=38 Identities=18% Similarity=0.369 Sum_probs=31.0
Q ss_pred eEEEeeeecCCCCCCcEEEEEEEecCC-C-cccCCCCEEEEccCC
Q 013425 48 KMIKNQPLTKSGSGKDVHHFEFEFVSA-A-IEYEVGDVLEILPSQ 90 (443)
Q Consensus 48 ~v~~~~~Lt~~~~~~~v~~i~l~~~~~-~-~~y~~GD~l~I~p~N 90 (443)
+|++++.+++ +++.++|..++. . ..|+||.++.|..++
T Consensus 12 ~V~~~~~~t~-----~~~~l~l~~~~~~~~~~~~pGQ~v~l~~~~ 51 (321)
T 2pia_A 12 KIASKEKIAR-----DIWSFELTDPQGAPLPPFEAGANLTVAVPN 51 (321)
T ss_dssp EEEEEEEEET-----TEEEEEEECTTCCCCCCCCTTCEEEEECTT
T ss_pred EEEEEEEcCC-----CEEEEEEEcCCCCcCCCCCCCCEEEEECCC
Confidence 8999999984 688999998742 2 389999999998764
No 43
>2eix_A NADH-cytochrome B5 reductase; flavoprotein, FAD-binding domain, NADH-binding, oxidoreducta; HET: FAD; 1.56A {Physarum polycephalum}
Probab=31.15 E-value=75 Score=28.36 Aligned_cols=42 Identities=10% Similarity=0.280 Sum_probs=32.8
Q ss_pred Cccce--eEEEeeeecCCCCCCcEEEEEEEecC--CCcccCCCCEEEEccC
Q 013425 43 AVCFL--KMIKNQPLTKSGSGKDVHHFEFEFVS--AAIEYEVGDVLEILPS 89 (443)
Q Consensus 43 ~~~~~--~v~~~~~Lt~~~~~~~v~~i~l~~~~--~~~~y~~GD~l~I~p~ 89 (443)
|..|. +|++++.+++ +++.++|.+++ ....|+||.++.|..+
T Consensus 8 ~~~~~~~~v~~~~~~t~-----~~~~~~l~~~~~~~~~~~~pGq~v~l~~~ 53 (243)
T 2eix_A 8 PNEYKKFMLREKQIINH-----NTRLFRFNLHHPEDVVGLPIGQHMSVKAT 53 (243)
T ss_dssp SSSCEEEEEEEEEEEET-----TEEEEEEECSSTTCCCCCCTTCEEEEEEE
T ss_pred CCceEEEEEEEEEEeCC-----CeEEEEEEcCCCCcccCcCCceEEEEEEe
Confidence 44454 9999999984 67888998873 2478999999999765
No 44
>1tvc_A Methane monooxygenase component C, methane monooxygenase; FAD-binding, NADH-binding, oxidoreductase; HET: FDA; NMR {Methylococcus capsulatus} SCOP: b.43.4.2 c.25.1.2
Probab=30.82 E-value=41 Score=30.46 Aligned_cols=43 Identities=9% Similarity=0.234 Sum_probs=33.3
Q ss_pred Cccce-eEEEeeeecCCCCCCcEEEEEEEe-c-CC---CcccCCCCEEEEccCC
Q 013425 43 AVCFL-KMIKNQPLTKSGSGKDVHHFEFEF-V-SA---AIEYEVGDVLEILPSQ 90 (443)
Q Consensus 43 ~~~~~-~v~~~~~Lt~~~~~~~v~~i~l~~-~-~~---~~~y~~GD~l~I~p~N 90 (443)
+..+. +|++++.+++ +++.++|.. + +. ...|+||.++.|..++
T Consensus 8 ~~~~~~~V~~~~~~~~-----~~~~l~l~~~~~~~~~~~~~~~pGQ~v~l~~~~ 56 (250)
T 1tvc_A 8 VGSFEAEVVGLNWVSS-----NTVQFLLQKRPDECGNRGVKFEPGQFMDLTIPG 56 (250)
T ss_dssp SSEEEEEBCCCEEEET-----TEEEEEECSSTTSSSSSCCSCCSCCEEEECTTS
T ss_pred cceEEEEEEEEEEcCC-----CeEEEEEEecCCCCcccccCcCCCcEEEEEeCC
Confidence 34455 8888888874 688999987 5 43 5789999999998754
No 45
>4eh1_A Flavohemoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: FAD; 2.20A {Vibrio cholerae o1 biovar el tor}
Probab=30.43 E-value=91 Score=27.74 Aligned_cols=38 Identities=16% Similarity=0.210 Sum_probs=30.6
Q ss_pred eEEEeeeecCCCCCCcEEEEEEEecCC--CcccCCCCEEEEccCC
Q 013425 48 KMIKNQPLTKSGSGKDVHHFEFEFVSA--AIEYEVGDVLEILPSQ 90 (443)
Q Consensus 48 ~v~~~~~Lt~~~~~~~v~~i~l~~~~~--~~~y~~GD~l~I~p~N 90 (443)
+|++.+.++ .+++.++|..++. ...|+||.++.|..+.
T Consensus 7 ~V~~~~~~~-----~~~~~~~l~~~~~~~~~~~~pGq~v~l~~~~ 46 (243)
T 4eh1_A 7 VVREKQVES-----AYVTSFVLVPADGGAVLDYQPGQYIGIEVTP 46 (243)
T ss_dssp EEEEEEECS-----SSEEEEEEEESSCSCCCCCCTTCEEEEEECC
T ss_pred EEEEEEEcC-----CCeEEEEEEeCCCCcCCCcCCCCEEEEEEec
Confidence 788888887 3688999998732 3789999999998764
No 46
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B*
Probab=29.68 E-value=56 Score=29.84 Aligned_cols=39 Identities=5% Similarity=0.078 Sum_probs=31.5
Q ss_pred eEEEeeeecCCCCCCcEEEEEEEecCCCcccCCCCEEEEccCCC
Q 013425 48 KMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQD 91 (443)
Q Consensus 48 ~v~~~~~Lt~~~~~~~v~~i~l~~~~~~~~y~~GD~l~I~p~N~ 91 (443)
+|++++.+++ ++++++|..++....|+||.++.|..++.
T Consensus 9 ~V~~~~~~t~-----~~~~l~l~~~~~~~~~~pGQ~v~l~~~~~ 47 (262)
T 1ep3_B 9 TVVSQREVAY-----NIFEMVLKGTLVDEMDLPGQFLHLAVPNG 47 (262)
T ss_dssp EEEEEEEEET-----TEEEEEEESGGGGGCCSTTCEEEECCSCT
T ss_pred EEEEEEEecC-----CEEEEEEEcCcccccCCCCceEEEEcCCC
Confidence 8899999884 68899999773346899999999987653
No 47
>1qfj_A Protein (flavin reductase); riboflavin, ferredoxin reductase superfami oxidoreductase; 2.20A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1
Probab=29.41 E-value=72 Score=28.25 Aligned_cols=37 Identities=19% Similarity=0.266 Sum_probs=30.4
Q ss_pred eEEEeeeecCCCCCCcEEEEEEEecCCCcccCCCCEEEEccCC
Q 013425 48 KMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQ 90 (443)
Q Consensus 48 ~v~~~~~Lt~~~~~~~v~~i~l~~~~~~~~y~~GD~l~I~p~N 90 (443)
+|++++.+++ ++++++|..+ ....|+||.++.|..+.
T Consensus 6 ~V~~~~~~~~-----~~~~l~l~~~-~~~~~~pGq~v~l~~~~ 42 (232)
T 1qfj_A 6 KVTSVEAITD-----TVYRVRIVPD-AAFSFRAGQYLMVVMDE 42 (232)
T ss_dssp EEEEEEESSS-----SCEEEEEEES-SCCCCCTTCEEEEESSS
T ss_pred EEEEEEecCC-----CEEEEEEecC-CCCCcCCCCEEEEECCC
Confidence 7888888874 6789999876 46799999999998653
No 48
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=29.16 E-value=82 Score=29.88 Aligned_cols=42 Identities=12% Similarity=0.282 Sum_probs=33.5
Q ss_pred ccce-eEEEeeeecCCCCCCcEEEEEEEecCC--CcccCCCCEEEEccCC
Q 013425 44 VCFL-KMIKNQPLTKSGSGKDVHHFEFEFVSA--AIEYEVGDVLEILPSQ 90 (443)
Q Consensus 44 ~~~~-~v~~~~~Lt~~~~~~~v~~i~l~~~~~--~~~y~~GD~l~I~p~N 90 (443)
..+. +|++++.+++ ++++++|..++. ...|+||.++.|..++
T Consensus 107 ~~~~~~V~~~~~~~~-----~~~~l~l~~~~~~~~~~~~pGQ~v~l~~~~ 151 (338)
T 1krh_A 107 HHFEGTLARVENLSD-----STITFDIQLDDGQPDIHFLAGQYVNVTLPG 151 (338)
T ss_dssp EEEEEEEEEEEESSS-----SEEEEEEEECTTCCCCCCCTTCEEEEECTT
T ss_pred eEEEEEEEEEEEcCC-----CEEEEEEEeCCCCCCCCcCCCCeEEEEcCC
Confidence 3445 8999888884 689999998743 5889999999998654
No 49
>2lnb_A Z-DNA-binding protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, immune system; NMR {Homo sapiens}
Probab=27.51 E-value=1.3e+02 Score=22.87 Aligned_cols=26 Identities=15% Similarity=0.201 Sum_probs=21.6
Q ss_pred HhCCCCHHHHHHHHHHHHHcCCEEEe
Q 013425 415 KEGEASRDSAANWLKALQRAGRYHVE 440 (443)
Q Consensus 415 ~~~~~~~~~a~~~l~~l~~~~Ry~~d 440 (443)
+..|++..+....+++|+++|+....
T Consensus 42 e~~GvdKKeVdKaik~LKkEgkI~SP 67 (80)
T 2lnb_A 42 KECQAPKRELNQVLYRMKKELKVSLT 67 (80)
T ss_dssp HHHTSCHHHHHHHHHHHHHTTSEEEE
T ss_pred HHHCCCHHHHHHHHHHHHHcCCccCC
Confidence 34578999999999999999997643
No 50
>1umk_A B5R, NADH-cytochrome B5 reductase; flavoprotein, beta barrel, FAD-binding domain, NADH-binding domain, oxidoreductase; HET: FAD; 1.75A {Homo sapiens} SCOP: b.43.4.2 c.25.1.1 PDB: 1ndh_A* 1i7p_A* 1ib0_A* 1qx4_A*
Probab=27.27 E-value=95 Score=28.31 Aligned_cols=37 Identities=19% Similarity=0.432 Sum_probs=30.1
Q ss_pred eEEEeeeecCCCCCCcEEEEEEEecCC--CcccCCCCEEEEccC
Q 013425 48 KMIKNQPLTKSGSGKDVHHFEFEFVSA--AIEYEVGDVLEILPS 89 (443)
Q Consensus 48 ~v~~~~~Lt~~~~~~~v~~i~l~~~~~--~~~y~~GD~l~I~p~ 89 (443)
+|++++.+++ +++.++|.+++. ...|+||.++.|..+
T Consensus 20 ~V~~~~~~~~-----~~~~~~l~~~~~~~~~~~~pGQ~v~l~~~ 58 (275)
T 1umk_A 20 RLIDREIISH-----DTRRFRFALPSPQHILGLPVGQHIYLSAR 58 (275)
T ss_dssp EEEEEEECSS-----SEEEEEEECSSTTCBCCCCTTCEEEEEEE
T ss_pred EEEEEEEcCC-----CeEEEEEEcCCcccccCCCCCcEEEEEEe
Confidence 8999998874 688999998732 468999999999854
No 51
>2bgi_A Ferredoxin-NADP(H) reductase; ferredoxin(flavodoxin)-NADP(H) reductase, flavoproteins, electron transfer, oxidoreductase; HET: FAD HTG; 1.68A {Rhodobacter capsulatus} PDB: 2bgj_A* 2vnh_A* 2vni_A* 2vnj_A* 2vnk_A*
Probab=24.71 E-value=89 Score=28.63 Aligned_cols=37 Identities=11% Similarity=0.173 Sum_probs=30.7
Q ss_pred eEEEeeeecCCCCCCcEEEEEEEecCCCcccCCCCEEEEccCC
Q 013425 48 KMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQ 90 (443)
Q Consensus 48 ~v~~~~~Lt~~~~~~~v~~i~l~~~~~~~~y~~GD~l~I~p~N 90 (443)
+|++++.+++ +++.++|..+ ....|+||.++.|..+.
T Consensus 20 ~V~~~~~~~~-----~~~~l~l~~~-~~~~~~pGQ~v~l~~~~ 56 (272)
T 2bgi_A 20 TVTSVRHWTD-----TLFSFRVTRP-QTLRFRSGEFVMIGLLD 56 (272)
T ss_dssp EEEEEEEEET-----TEEEEEEECC-TTCCCCTTCEEEEEEEC
T ss_pred EEEEEEEcCC-----CEEEEEEeCC-CCCccCCCCEEEEEecc
Confidence 8999999984 6889999876 45789999999998653
No 52
>2cnd_A NADH-dependent nitrate reductase; nitrate assimilating enzyme, oxidoreductase, nitrogenous acceptor; HET: FAD; 2.50A {Zea mays} SCOP: b.43.4.2 c.25.1.1 PDB: 1cnf_A* 1cne_A*
Probab=23.85 E-value=1.1e+02 Score=27.81 Aligned_cols=37 Identities=19% Similarity=0.486 Sum_probs=30.2
Q ss_pred eEEEeeeecCCCCCCcEEEEEEEecC--CCcccCCCCEEEEccC
Q 013425 48 KMIKNQPLTKSGSGKDVHHFEFEFVS--AAIEYEVGDVLEILPS 89 (443)
Q Consensus 48 ~v~~~~~Lt~~~~~~~v~~i~l~~~~--~~~~y~~GD~l~I~p~ 89 (443)
+|++++.+++ +++.++|..++ ....|+||.++.|..+
T Consensus 16 ~v~~~~~~~~-----~~~~~~l~~~~~~~~~~~~pGQ~v~l~~~ 54 (270)
T 2cnd_A 16 RLVAKKELSR-----DVRLFRFSLPSPDQVLGLPIGKHIFVCAT 54 (270)
T ss_dssp EEEEEEEEET-----TEEEEEEECSSTTCCCCCCTTCEEEEEEE
T ss_pred EEEEEEEeCC-----CeEEEEEECCCCccccCCCCCCEEEEEee
Confidence 8999999984 68899999873 2468999999998754
No 53
>2qdx_A Ferredoxin reductase; oxidoreductase; HET: FAD; 1.55A {Pseudomonas aeruginosa} PDB: 3crz_A* 1a8p_A*
Probab=23.78 E-value=96 Score=27.98 Aligned_cols=37 Identities=8% Similarity=0.192 Sum_probs=30.5
Q ss_pred eEEEeeeecCCCCCCcEEEEEEEecCCCcccCCCCEEEEccCC
Q 013425 48 KMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQ 90 (443)
Q Consensus 48 ~v~~~~~Lt~~~~~~~v~~i~l~~~~~~~~y~~GD~l~I~p~N 90 (443)
+|++++.+++ +++.++|..+ ....|+||.++.|..+.
T Consensus 7 ~V~~~~~~~~-----~~~~l~l~~~-~~~~~~pGq~v~l~~~~ 43 (257)
T 2qdx_A 7 RVLSVHHWND-----TLFSFKTTRN-PGLRFKTGQFVMIGLEV 43 (257)
T ss_dssp EEEEEEEEET-----TEEEEEEECC-TTCCCCTTCEEEEEEEE
T ss_pred EEEEEEEcCC-----CeEEEEEeCC-CCCccCCCCEEEEEecC
Confidence 8899999884 6889999876 45789999999997653
No 54
>4fk8_A Ferredoxin--NADP reductase; ssgcid, NIH, niaid, structural genomics, national institute allergy and infectious diseases; HET: FAD; 2.10A {Burkholderia thailandensis} PDB: 4f7d_A*
Probab=23.06 E-value=87 Score=28.55 Aligned_cols=36 Identities=11% Similarity=0.170 Sum_probs=30.5
Q ss_pred eEEEeeeecCCCCCCcEEEEEEEecCCCcccCCCCEEEEccC
Q 013425 48 KMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPS 89 (443)
Q Consensus 48 ~v~~~~~Lt~~~~~~~v~~i~l~~~~~~~~y~~GD~l~I~p~ 89 (443)
+|++++.+++ +++.++|..+ ....|+||.++.|..+
T Consensus 23 ~V~~~~~~~~-----~~~~~~l~~~-~~~~~~pGQ~v~l~~~ 58 (271)
T 4fk8_A 23 TVLSVHHWTD-----TLFSFTCTRD-QALRFNNGEFTMVGLE 58 (271)
T ss_dssp EEEEEEEEET-----TEEEEEECCC-TTCCCCTTCEEEEEEE
T ss_pred EEEEEEEcCC-----CEEEEEEEcC-CCCCcCCCCEEEEEcc
Confidence 8999999984 6889999876 4689999999999765
No 55
>1fdr_A Flavodoxin reductase; ferredoxin reductase, flavin, oxidoreductase, flavoprotein; HET: FAD; 1.70A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1 PDB: 2xnj_A* 3fpk_A*
Probab=21.34 E-value=1.4e+02 Score=26.69 Aligned_cols=36 Identities=14% Similarity=0.212 Sum_probs=29.4
Q ss_pred eEEEeeeecCCCCCCcEEEEEEEecCCCcccCCCCEEEEccCC
Q 013425 48 KMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQ 90 (443)
Q Consensus 48 ~v~~~~~Lt~~~~~~~v~~i~l~~~~~~~~y~~GD~l~I~p~N 90 (443)
+|++++.+++ +++.++|. + ....|+||.++.|..+.
T Consensus 8 ~V~~~~~~~~-----~~~~l~l~-~-~~~~~~pGq~v~l~~~~ 43 (248)
T 1fdr_A 8 KVTKVQNWTD-----ALFSLTVH-A-PVLPFTAGQFTKLGLEI 43 (248)
T ss_dssp EEEEEEECSS-----SEEEEEEE-C-CCCCCCTTCEEEEEECC
T ss_pred EEEEEEEcCC-----CEEEEEEe-C-CCCCcCCCCcEEEEccC
Confidence 8888888874 68899986 4 46789999999998764
No 56
>1gvh_A Flavohemoprotein; oxidoreductase, NADP, heme, flavoprotein, FAD, iron transpor; HET: FAD HEM; 2.19A {Escherichia coli} SCOP: a.1.1.2 b.43.4.2 c.25.1.5
Probab=20.91 E-value=1.3e+02 Score=29.25 Aligned_cols=37 Identities=24% Similarity=0.449 Sum_probs=30.5
Q ss_pred eEEEeeeecCCCCCCcEEEEEEEecCC--CcccCCCCEEEEccC
Q 013425 48 KMIKNQPLTKSGSGKDVHHFEFEFVSA--AIEYEVGDVLEILPS 89 (443)
Q Consensus 48 ~v~~~~~Lt~~~~~~~v~~i~l~~~~~--~~~y~~GD~l~I~p~ 89 (443)
+|++++.++ .+++.++|..++. -..|+||+++.|..+
T Consensus 156 ~V~~~~~~s-----~~i~~~~l~~~~~~~~~~~~pGQ~v~l~~~ 194 (396)
T 1gvh_A 156 RIVAKTPRS-----ALITSFELEPVDGGAVAEYRPGQYLGVWLK 194 (396)
T ss_dssp EEEEEEECS-----SSEEEEEEEETTCCCCCCCCTTCEEEEEEC
T ss_pred EEEEEEEcC-----CCeEEEEEEeCCCCcCCCCCCCCeEEEEec
Confidence 899999987 3788999998732 258999999999876
Done!