Query 013428
Match_columns 443
No_of_seqs 233 out of 1150
Neff 5.1
Searched_HMMs 46136
Date Fri Mar 29 03:45:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013428.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013428hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1605 TFIIF-interacting CTD 100.0 1.2E-48 2.5E-53 383.0 14.3 186 255-441 75-262 (262)
2 TIGR02251 HIF-SF_euk Dullard-l 100.0 1.4E-40 3.1E-45 304.3 18.0 161 270-430 1-162 (162)
3 PF03031 NIF: NLI interacting 100.0 1.2E-38 2.7E-43 286.6 16.8 158 271-432 1-159 (159)
4 TIGR02245 HAD_IIID1 HAD-superf 100.0 3.3E-36 7.2E-41 284.6 15.8 158 267-440 18-193 (195)
5 KOG2832 TFIIF-interacting CTD 100.0 3.7E-32 8E-37 273.5 11.0 156 265-436 184-341 (393)
6 TIGR02250 FCP1_euk FCP1-like p 100.0 4E-31 8.6E-36 241.6 13.7 138 267-407 3-154 (156)
7 COG5190 FCP1 TFIIF-interacting 100.0 3.7E-29 8E-34 256.6 8.5 175 265-440 207-383 (390)
8 smart00577 CPDc catalytic doma 99.9 2.8E-26 6E-31 206.2 15.6 145 269-413 1-148 (148)
9 KOG0323 TFIIF-interacting CTD 99.8 1.5E-18 3.3E-23 187.2 11.0 137 268-407 144-297 (635)
10 TIGR01685 MDP-1 magnesium-depe 98.5 2.4E-07 5.1E-12 86.8 8.1 138 271-408 3-158 (174)
11 TIGR01681 HAD-SF-IIIC HAD-supe 98.4 1.5E-07 3.3E-12 82.9 3.4 111 271-393 1-121 (128)
12 COG4996 Predicted phosphatase 98.4 1.6E-06 3.4E-11 78.4 8.2 133 272-410 2-149 (164)
13 COG5190 FCP1 TFIIF-interacting 98.3 3.5E-07 7.7E-12 95.1 3.5 137 267-405 23-172 (390)
14 PRK13288 pyrophosphatase PpaX; 98.2 5.7E-07 1.2E-11 84.4 2.8 95 309-404 81-179 (214)
15 cd01427 HAD_like Haloacid deha 98.2 1E-06 2.2E-11 73.6 3.6 108 272-395 1-128 (139)
16 PRK14988 GMP/IMP nucleotidase; 98.2 5.9E-07 1.3E-11 86.1 1.4 93 309-402 92-188 (224)
17 TIGR01662 HAD-SF-IIIA HAD-supe 98.2 2.2E-06 4.7E-11 74.7 4.6 114 271-402 1-126 (132)
18 PRK13225 phosphoglycolate phos 98.1 1.3E-06 2.8E-11 86.8 1.4 95 309-404 141-236 (273)
19 TIGR01684 viral_ppase viral ph 98.1 1.1E-05 2.5E-10 81.4 8.0 123 267-412 123-281 (301)
20 PHA03398 viral phosphatase sup 98.0 2.2E-05 4.9E-10 79.4 9.4 123 267-412 125-283 (303)
21 TIGR00213 GmhB_yaeD D,D-heptos 98.0 7.7E-06 1.7E-10 75.3 5.5 115 271-403 2-146 (176)
22 PRK13226 phosphoglycolate phos 98.0 3.5E-06 7.5E-11 80.6 2.8 96 308-404 93-192 (229)
23 TIGR00338 serB phosphoserine p 98.0 2.3E-06 4.9E-11 80.3 0.9 96 309-406 84-193 (219)
24 PF12689 Acid_PPase: Acid Phos 97.9 2.5E-05 5.5E-10 73.1 7.4 117 270-393 3-137 (169)
25 TIGR01656 Histidinol-ppas hist 97.9 1.1E-05 2.5E-10 72.2 4.5 117 271-403 1-141 (147)
26 TIGR01261 hisB_Nterm histidino 97.9 3.4E-05 7.4E-10 71.1 6.8 122 271-407 2-147 (161)
27 COG0637 Predicted phosphatase/ 97.8 3.7E-06 8E-11 80.7 0.2 99 309-408 85-187 (221)
28 PHA02597 30.2 hypothetical pro 97.8 2.8E-06 6.1E-11 78.7 -0.6 96 309-406 73-173 (197)
29 PRK08942 D,D-heptose 1,7-bisph 97.8 3.4E-05 7.4E-10 71.1 6.2 116 270-402 3-142 (181)
30 TIGR01686 FkbH FkbH-like domai 97.8 3.8E-05 8.3E-10 77.6 6.3 108 270-393 3-116 (320)
31 PHA02530 pseT polynucleotide k 97.8 2.1E-05 4.5E-10 77.7 3.9 128 268-406 156-295 (300)
32 TIGR01672 AphA HAD superfamily 97.6 8.1E-05 1.8E-09 73.0 5.1 132 267-403 60-207 (237)
33 PF13419 HAD_2: Haloacid dehal 97.5 9.1E-05 2E-09 65.0 4.0 95 307-402 74-172 (176)
34 TIGR01664 DNA-3'-Pase DNA 3'-p 97.5 0.0002 4.3E-09 66.2 6.3 107 270-390 13-137 (166)
35 PRK06769 hypothetical protein; 97.4 0.00022 4.7E-09 66.0 4.9 116 271-404 5-134 (173)
36 PF05152 DUF705: Protein of un 97.4 0.00097 2.1E-08 67.2 9.8 72 268-361 120-193 (297)
37 TIGR01489 DKMTPPase-SF 2,3-dik 97.4 0.00019 4.1E-09 65.0 4.3 87 309-396 71-178 (188)
38 TIGR01668 YqeG_hyp_ppase HAD s 97.4 0.00034 7.4E-09 64.5 5.9 109 268-405 23-134 (170)
39 PRK13582 thrH phosphoserine ph 97.3 5.4E-05 1.2E-09 70.2 0.5 94 309-403 67-167 (205)
40 TIGR01509 HAD-SF-IA-v3 haloaci 97.3 0.00021 4.5E-09 64.3 4.1 92 309-402 84-179 (183)
41 TIGR02253 CTE7 HAD superfamily 97.3 0.00024 5.3E-09 66.5 4.2 96 308-404 92-192 (221)
42 PLN03243 haloacid dehalogenase 97.3 0.00029 6.2E-09 69.6 4.8 98 309-407 108-209 (260)
43 PLN02770 haloacid dehalogenase 97.3 0.00038 8.3E-09 67.6 5.3 97 309-406 107-207 (248)
44 PRK05446 imidazole glycerol-ph 97.2 0.00063 1.4E-08 70.5 6.9 121 269-404 1-145 (354)
45 TIGR01993 Pyr-5-nucltdase pyri 97.2 0.00022 4.7E-09 65.4 2.7 92 309-403 83-181 (184)
46 PRK11009 aphA acid phosphatase 97.2 0.0011 2.3E-08 65.3 7.7 131 267-403 60-207 (237)
47 TIGR01454 AHBA_synth_RP 3-amin 97.2 0.00045 9.8E-09 64.4 4.9 96 309-405 74-173 (205)
48 COG0546 Gph Predicted phosphat 97.2 0.00029 6.3E-09 67.2 3.6 94 309-403 88-185 (220)
49 KOG3109 Haloacid dehalogenase- 97.2 0.00022 4.8E-09 69.4 2.6 90 309-400 99-198 (244)
50 TIGR02254 YjjG/YfnB HAD superf 97.2 0.00036 7.8E-09 65.1 4.0 94 309-403 96-194 (224)
51 TIGR01449 PGP_bact 2-phosphogl 97.2 0.00043 9.4E-09 64.3 4.3 97 309-406 84-184 (213)
52 TIGR01428 HAD_type_II 2-haloal 97.1 0.00045 9.7E-09 63.9 4.3 94 309-403 91-188 (198)
53 TIGR01670 YrbI-phosphatas 3-de 97.0 0.00083 1.8E-08 61.0 4.8 112 271-402 2-114 (154)
54 PLN02954 phosphoserine phospha 97.0 0.00036 7.8E-09 65.7 2.5 92 309-402 83-191 (224)
55 PRK10826 2-deoxyglucose-6-phos 97.0 0.00084 1.8E-08 63.5 4.6 100 309-409 91-194 (222)
56 PRK09456 ?-D-glucose-1-phospha 97.0 0.00061 1.3E-08 63.5 3.6 101 308-408 82-186 (199)
57 PRK09449 dUMP phosphatase; Pro 96.9 0.00082 1.8E-08 63.3 4.1 93 309-402 94-191 (224)
58 TIGR02137 HSK-PSP phosphoserin 96.9 0.00059 1.3E-08 65.1 3.1 49 309-358 67-115 (203)
59 TIGR01689 EcbF-BcbF capsule bi 96.9 0.0027 5.9E-08 56.8 6.7 73 271-360 2-87 (126)
60 TIGR02009 PGMB-YQAB-SF beta-ph 96.9 0.00069 1.5E-08 61.4 2.8 92 309-403 87-182 (185)
61 PRK10725 fructose-1-P/6-phosph 96.9 0.00079 1.7E-08 61.4 3.1 94 309-404 87-183 (188)
62 PLN02575 haloacid dehalogenase 96.8 0.0012 2.7E-08 69.0 4.9 97 309-406 215-315 (381)
63 PRK11587 putative phosphatase; 96.7 0.0025 5.4E-08 60.3 5.8 97 309-407 82-182 (218)
64 TIGR01422 phosphonatase phosph 96.7 0.0017 3.7E-08 62.7 4.7 98 309-406 98-200 (253)
65 TIGR01663 PNK-3'Pase polynucle 96.7 0.0025 5.4E-08 69.4 6.2 109 268-390 166-294 (526)
66 PRK13222 phosphoglycolate phos 96.6 0.0028 6E-08 59.3 4.6 93 309-402 92-188 (226)
67 TIGR01491 HAD-SF-IB-PSPlk HAD- 96.5 0.0052 1.1E-07 56.3 5.9 94 309-403 79-186 (201)
68 PRK13223 phosphoglycolate phos 96.4 0.0034 7.4E-08 62.1 4.6 94 309-403 100-197 (272)
69 PRK08238 hypothetical protein; 96.4 0.0044 9.6E-08 66.7 5.2 77 309-391 71-150 (479)
70 PRK13478 phosphonoacetaldehyde 96.3 0.0056 1.2E-07 59.9 5.5 98 309-406 100-202 (267)
71 PRK11133 serB phosphoserine ph 96.3 0.0014 2.9E-08 67.1 1.1 95 309-404 180-288 (322)
72 PRK09484 3-deoxy-D-manno-octul 96.3 0.0062 1.3E-07 56.8 5.4 114 269-403 20-135 (183)
73 PRK10563 6-phosphogluconate ph 96.3 0.0021 4.7E-08 60.4 2.2 95 309-406 87-185 (221)
74 TIGR01459 HAD-SF-IIA-hyp4 HAD- 96.3 0.0071 1.5E-07 58.5 5.7 94 271-390 9-105 (242)
75 PLN02779 haloacid dehalogenase 96.3 0.0053 1.1E-07 61.3 4.9 97 309-406 143-245 (286)
76 COG1011 Predicted hydrolase (H 96.2 0.0067 1.5E-07 56.7 5.2 93 309-402 98-194 (229)
77 TIGR02247 HAD-1A3-hyp Epoxide 96.2 0.002 4.4E-08 60.2 1.7 98 309-407 93-196 (211)
78 TIGR03351 PhnX-like phosphonat 96.2 0.0049 1.1E-07 57.8 4.2 95 309-403 86-186 (220)
79 TIGR02252 DREG-2 REG-2-like, H 96.2 0.0053 1.1E-07 56.9 4.1 90 310-401 105-199 (203)
80 TIGR01990 bPGM beta-phosphoglu 96.1 0.0044 9.4E-08 56.2 3.3 91 310-403 87-181 (185)
81 PLN02940 riboflavin kinase 96.1 0.0043 9.4E-08 64.6 3.5 96 309-405 92-192 (382)
82 TIGR01533 lipo_e_P4 5'-nucleot 96.0 0.0063 1.4E-07 60.9 4.1 93 268-361 73-173 (266)
83 COG0560 SerB Phosphoserine pho 96.0 0.013 2.7E-07 56.6 5.9 86 309-395 76-175 (212)
84 TIGR01691 enolase-ppase 2,3-di 96.0 0.0057 1.2E-07 59.4 3.5 95 309-404 94-193 (220)
85 TIGR01548 HAD-SF-IA-hyp1 haloa 96.0 0.015 3.2E-07 54.1 6.0 82 311-393 107-191 (197)
86 TIGR01549 HAD-SF-IA-v1 haloaci 95.9 0.013 2.7E-07 51.9 5.0 82 309-393 63-147 (154)
87 PLN02811 hydrolase 95.7 0.0091 2E-07 56.7 3.6 97 309-406 77-183 (220)
88 PLN02919 haloacid dehalogenase 95.5 0.021 4.5E-07 67.0 6.1 97 311-407 162-262 (1057)
89 PRK06698 bifunctional 5'-methy 95.3 0.018 3.9E-07 61.1 4.4 92 309-403 329-423 (459)
90 PRK09552 mtnX 2-hydroxy-3-keto 95.3 0.044 9.6E-07 52.0 6.6 96 309-404 73-184 (219)
91 COG0561 Cof Predicted hydrolas 95.1 0.066 1.4E-06 51.9 7.5 58 270-350 3-61 (264)
92 PF08645 PNK3P: Polynucleotide 95.0 0.038 8.2E-07 50.9 5.1 106 271-391 1-129 (159)
93 COG0241 HisB Histidinol phosph 94.9 0.048 1E-06 51.9 5.6 125 270-408 5-153 (181)
94 PRK00192 mannosyl-3-phosphogly 94.9 0.07 1.5E-06 52.4 6.9 58 270-350 4-62 (273)
95 PF08282 Hydrolase_3: haloacid 94.7 0.081 1.8E-06 49.1 6.5 54 273-349 1-55 (254)
96 TIGR02726 phenyl_P_delta pheny 94.7 0.057 1.2E-06 50.4 5.3 114 270-404 7-122 (169)
97 TIGR01493 HAD-SF-IA-v2 Haloaci 94.5 0.011 2.3E-07 53.5 0.1 77 309-392 89-168 (175)
98 PTZ00445 p36-lilke protein; Pr 94.5 0.047 1E-06 53.3 4.4 128 267-407 40-205 (219)
99 TIGR03333 salvage_mtnX 2-hydro 94.4 0.081 1.8E-06 50.1 5.9 94 308-401 68-177 (214)
100 PRK03669 mannosyl-3-phosphogly 94.4 0.12 2.6E-06 50.7 7.1 59 268-349 5-64 (271)
101 PF13344 Hydrolase_6: Haloacid 94.2 0.091 2E-06 44.8 5.1 50 273-346 1-51 (101)
102 TIGR01487 SPP-like sucrose-pho 94.2 0.14 2.9E-06 48.3 6.8 57 271-350 2-59 (215)
103 COG2179 Predicted hydrolase of 94.1 0.07 1.5E-06 50.3 4.5 116 263-407 21-141 (175)
104 PRK10513 sugar phosphate phosp 93.9 0.16 3.5E-06 49.2 6.9 57 270-349 3-60 (270)
105 TIGR01544 HAD-SF-IE haloacid d 93.8 0.14 3.1E-06 51.6 6.6 105 308-413 119-248 (277)
106 TIGR02461 osmo_MPG_phos mannos 93.8 0.17 3.7E-06 48.8 6.8 53 273-349 2-55 (225)
107 PRK10530 pyridoxal phosphate ( 93.7 0.21 4.5E-06 48.2 7.4 58 270-350 3-61 (272)
108 PRK01158 phosphoglycolate phos 93.5 0.26 5.6E-06 46.5 7.4 57 271-350 4-61 (230)
109 TIGR00099 Cof-subfamily Cof su 93.4 0.19 4E-06 48.6 6.3 55 272-349 1-56 (256)
110 TIGR02463 MPGP_rel mannosyl-3- 93.3 0.23 5.1E-06 46.7 6.8 54 273-349 2-56 (221)
111 PRK10976 putative hydrolase; P 93.2 0.25 5.5E-06 47.8 6.9 57 271-350 3-60 (266)
112 PRK15126 thiamin pyrimidine py 93.1 0.26 5.6E-06 48.1 6.9 57 271-350 3-60 (272)
113 PF09419 PGP_phosphatase: Mito 93.1 0.3 6.6E-06 45.9 7.0 96 266-391 37-147 (168)
114 KOG2914 Predicted haloacid-hal 92.2 0.033 7.1E-07 54.5 -0.6 98 308-406 90-195 (222)
115 TIGR01486 HAD-SF-IIB-MPGP mann 92.2 0.33 7.2E-06 47.1 6.3 55 272-349 1-56 (256)
116 smart00775 LNS2 LNS2 domain. T 92.1 0.36 7.8E-06 44.3 6.1 62 273-346 2-67 (157)
117 TIGR01488 HAD-SF-IB Haloacid D 92.1 0.45 9.8E-06 42.7 6.6 49 309-358 72-121 (177)
118 PRK10748 flavin mononucleotide 91.9 0.11 2.4E-06 50.1 2.5 89 309-403 112-204 (238)
119 TIGR01484 HAD-SF-IIB HAD-super 91.8 0.37 8.1E-06 44.7 5.9 54 272-347 1-55 (204)
120 COG3882 FkbH Predicted enzyme 91.7 0.39 8.5E-06 52.0 6.6 127 267-407 219-355 (574)
121 TIGR01482 SPP-subfamily Sucros 91.4 0.52 1.1E-05 44.1 6.5 53 273-348 1-54 (225)
122 TIGR01456 CECR5 HAD-superfamil 91.4 0.33 7.2E-06 49.3 5.5 53 271-347 1-62 (321)
123 PRK10444 UMP phosphatase; Prov 91.0 0.3 6.6E-06 48.0 4.7 54 271-348 2-56 (248)
124 PTZ00174 phosphomannomutase; P 90.7 0.65 1.4E-05 45.1 6.6 52 270-344 5-57 (247)
125 PF06888 Put_Phosphatase: Puta 90.6 0.38 8.2E-06 47.5 4.9 49 309-358 70-121 (234)
126 PRK12702 mannosyl-3-phosphogly 90.4 0.74 1.6E-05 47.2 6.9 57 271-350 2-59 (302)
127 TIGR01458 HAD-SF-IIA-hyp3 HAD- 90.3 0.35 7.5E-06 47.6 4.4 47 271-337 2-49 (257)
128 TIGR01490 HAD-SF-IB-hyp1 HAD-s 90.1 0.41 9E-06 44.1 4.5 86 309-395 86-186 (202)
129 PF11019 DUF2608: Protein of u 90.0 0.36 7.7E-06 47.9 4.2 101 308-408 79-210 (252)
130 PRK10187 trehalose-6-phosphate 89.7 0.79 1.7E-05 45.4 6.3 59 270-346 14-74 (266)
131 PLN02645 phosphoglycolate phos 89.6 0.43 9.4E-06 48.2 4.5 53 270-346 28-81 (311)
132 TIGR01452 PGP_euk phosphoglyco 89.1 0.64 1.4E-05 46.0 5.2 41 271-335 3-44 (279)
133 PLN02423 phosphomannomutase 88.6 1.1 2.4E-05 43.9 6.4 55 268-348 5-59 (245)
134 PRK14502 bifunctional mannosyl 88.3 1.6 3.5E-05 49.3 8.2 60 267-349 413-473 (694)
135 TIGR01485 SPP_plant-cyano sucr 87.8 1.1 2.3E-05 43.4 5.7 60 270-349 1-61 (249)
136 PLN02887 hydrolase family prot 87.1 1.5 3.3E-05 48.7 7.0 59 268-349 306-365 (580)
137 COG4502 5'(3')-deoxyribonucleo 86.3 1.5 3.2E-05 40.9 5.3 82 309-409 67-156 (180)
138 TIGR01457 HAD-SF-IIA-hyp2 HAD- 85.9 1.1 2.4E-05 43.8 4.7 39 272-334 3-42 (249)
139 TIGR01460 HAD-SF-IIA Haloacid 82.9 1.7 3.7E-05 42.1 4.5 50 273-346 1-55 (236)
140 TIGR00685 T6PP trehalose-phosp 82.5 1.3 2.9E-05 42.9 3.6 44 269-330 2-45 (244)
141 COG0647 NagD Predicted sugar p 82.4 1.9 4.1E-05 43.5 4.7 55 270-348 8-67 (269)
142 COG2503 Predicted secreted aci 82.3 1.5 3.3E-05 43.9 3.9 75 267-347 76-161 (274)
143 PLN02151 trehalose-phosphatase 82.0 2.7 5.9E-05 44.0 5.8 60 267-344 95-154 (354)
144 COG4359 Uncharacterized conser 81.9 3.8 8.1E-05 39.8 6.2 42 309-350 72-114 (220)
145 TIGR02244 HAD-IG-Ncltidse HAD 80.6 2.3 5E-05 44.3 4.7 53 306-358 180-240 (343)
146 KOG3120 Predicted haloacid deh 80.5 0.9 2E-05 45.0 1.6 41 309-349 83-125 (256)
147 PF06941 NT5C: 5' nucleotidase 80.5 1.4 3E-05 41.1 2.8 81 309-404 72-159 (191)
148 PF00702 Hydrolase: haloacid d 80.4 2 4.3E-05 39.3 3.8 80 308-391 125-206 (215)
149 PLN03017 trehalose-phosphatase 80.3 3.3 7.2E-05 43.6 5.8 60 267-344 108-167 (366)
150 PLN02580 trehalose-phosphatase 79.8 3.6 7.9E-05 43.5 6.0 61 267-345 116-176 (384)
151 PRK10725 fructose-1-P/6-phosph 79.3 1.1 2.5E-05 40.7 1.8 16 270-285 5-20 (188)
152 TIGR01675 plant-AP plant acid 78.7 2.5 5.3E-05 41.8 4.0 92 268-360 75-172 (229)
153 PRK11587 putative phosphatase; 78.6 1.1 2.4E-05 42.3 1.6 15 271-285 4-18 (218)
154 TIGR01511 ATPase-IB1_Cu copper 78.4 3.9 8.4E-05 45.0 5.9 86 308-403 403-489 (562)
155 COG1877 OtsB Trehalose-6-phosp 77.2 4.9 0.00011 40.5 5.7 60 267-344 15-76 (266)
156 TIGR01548 HAD-SF-IA-hyp1 haloa 75.5 1.3 2.8E-05 41.1 1.0 14 272-285 2-15 (197)
157 PRK11590 hypothetical protein; 74.4 1.8 3.8E-05 41.0 1.7 39 309-347 94-134 (211)
158 TIGR01993 Pyr-5-nucltdase pyri 73.4 1.9 4E-05 39.4 1.5 14 272-285 2-15 (184)
159 TIGR02253 CTE7 HAD superfamily 72.8 2 4.4E-05 40.0 1.7 15 271-285 3-17 (221)
160 TIGR03351 PhnX-like phosphonat 72.4 2 4.3E-05 40.2 1.5 15 271-285 2-16 (220)
161 TIGR02009 PGMB-YQAB-SF beta-ph 71.8 2 4.3E-05 38.8 1.3 15 271-285 2-16 (185)
162 PRK13223 phosphoglycolate phos 71.7 2.3 4.9E-05 42.1 1.8 16 270-285 13-28 (272)
163 TIGR01422 phosphonatase phosph 70.9 2.4 5.3E-05 40.8 1.8 15 271-285 3-17 (253)
164 PLN03243 haloacid dehalogenase 70.9 2.6 5.6E-05 41.8 2.0 20 266-285 20-39 (260)
165 PLN02770 haloacid dehalogenase 70.1 2.5 5.4E-05 41.1 1.6 16 270-285 22-37 (248)
166 PF03767 Acid_phosphat_B: HAD 69.8 0.77 1.7E-05 44.8 -2.0 65 268-338 70-144 (229)
167 TIGR02252 DREG-2 REG-2-like, H 69.7 2.3 5E-05 39.3 1.3 14 272-285 2-15 (203)
168 PRK13478 phosphonoacetaldehyde 69.6 2.5 5.4E-05 41.3 1.6 16 270-285 4-19 (267)
169 PRK14501 putative bifunctional 69.6 8.5 0.00019 43.5 6.0 62 267-346 489-552 (726)
170 PRK11590 hypothetical protein; 68.5 7.7 0.00017 36.7 4.6 17 269-285 5-21 (211)
171 PRK10748 flavin mononucleotide 68.2 2.9 6.3E-05 40.3 1.7 16 270-285 10-25 (238)
172 TIGR01512 ATPase-IB2_Cd heavy 67.8 4.4 9.6E-05 44.2 3.1 87 308-403 360-448 (536)
173 TIGR01549 HAD-SF-IA-v1 haloaci 67.5 2.3 5E-05 37.4 0.8 14 272-285 1-14 (154)
174 PF05116 S6PP: Sucrose-6F-phos 67.4 8.2 0.00018 37.8 4.7 54 270-347 2-57 (247)
175 TIGR01454 AHBA_synth_RP 3-amin 66.2 2.3 5.1E-05 39.5 0.6 13 273-285 1-13 (205)
176 TIGR01990 bPGM beta-phosphoglu 66.0 2.9 6.2E-05 37.7 1.1 14 272-285 1-14 (185)
177 COG3769 Predicted hydrolase (H 65.7 21 0.00045 35.8 6.9 59 269-351 6-65 (274)
178 PRK10826 2-deoxyglucose-6-phos 65.2 3.8 8.2E-05 38.6 1.8 17 269-285 6-22 (222)
179 PLN02779 haloacid dehalogenase 65.1 3.5 7.5E-05 41.3 1.6 18 268-285 38-55 (286)
180 TIGR02471 sucr_syn_bact_C sucr 64.8 11 0.00023 36.0 4.8 54 272-349 1-54 (236)
181 TIGR01491 HAD-SF-IB-PSPlk HAD- 64.8 3.9 8.5E-05 37.3 1.8 16 270-285 4-19 (201)
182 TIGR01525 ATPase-IB_hvy heavy 64.7 6.1 0.00013 43.2 3.5 87 308-403 382-470 (556)
183 TIGR02254 YjjG/YfnB HAD superf 64.4 3.4 7.4E-05 38.4 1.3 15 271-285 2-16 (224)
184 TIGR01449 PGP_bact 2-phosphogl 64.3 2.7 5.8E-05 38.9 0.6 13 273-285 1-13 (213)
185 PRK09449 dUMP phosphatase; Pro 64.1 3.4 7.5E-05 38.7 1.3 14 271-284 4-17 (224)
186 TIGR01428 HAD_type_II 2-haloal 63.7 3.7 7.9E-05 37.9 1.3 15 271-285 2-16 (198)
187 TIGR02247 HAD-1A3-hyp Epoxide 63.7 4 8.7E-05 38.0 1.6 15 271-285 3-17 (211)
188 TIGR01545 YfhB_g-proteo haloac 63.5 17 0.00036 34.8 5.9 38 309-346 93-132 (210)
189 TIGR01493 HAD-SF-IA-v2 Haloaci 62.7 3.7 8E-05 36.9 1.1 13 273-285 2-14 (175)
190 PRK13222 phosphoglycolate phos 62.4 3.9 8.4E-05 38.1 1.3 16 270-285 6-21 (226)
191 PRK10563 6-phosphogluconate ph 61.8 4.4 9.5E-05 38.0 1.5 16 270-285 4-19 (221)
192 PF13419 HAD_2: Haloacid dehal 60.7 4.2 9.1E-05 35.3 1.1 13 273-285 1-13 (176)
193 KOG3085 Predicted hydrolase (H 59.3 5.4 0.00012 39.6 1.7 91 307-402 111-208 (237)
194 TIGR01509 HAD-SF-IA-v3 haloaci 57.6 4.7 0.0001 36.0 0.9 13 273-285 2-14 (183)
195 TIGR01680 Veg_Stor_Prot vegeta 55.5 24 0.00052 35.9 5.6 81 269-350 100-186 (275)
196 PF08235 LNS2: LNS2 (Lipin/Ned 55.4 29 0.00062 32.5 5.7 62 273-346 2-64 (157)
197 PF12710 HAD: haloacid dehalog 54.8 13 0.00027 33.6 3.2 47 311-357 86-138 (192)
198 PLN02575 haloacid dehalogenase 52.3 5.5 0.00012 42.1 0.5 19 267-285 128-146 (381)
199 PLN02382 probable sucrose-phos 51.2 31 0.00068 36.6 5.9 17 268-284 7-23 (413)
200 PRK06698 bifunctional 5'-methy 50.9 6.2 0.00013 42.0 0.6 15 271-285 242-256 (459)
201 PF02358 Trehalose_PPase: Treh 49.5 27 0.00059 33.5 4.8 48 274-339 1-50 (235)
202 PLN02205 alpha,alpha-trehalose 49.5 29 0.00064 40.5 5.8 60 267-346 593-654 (854)
203 PF05822 UMPH-1: Pyrimidine 5' 46.7 22 0.00049 35.6 3.7 99 308-406 88-210 (246)
204 PLN02940 riboflavin kinase 46.0 10 0.00022 39.7 1.3 16 270-285 11-26 (382)
205 PLN03063 alpha,alpha-trehalose 45.9 39 0.00084 39.1 6.0 64 267-345 504-569 (797)
206 PRK09552 mtnX 2-hydroxy-3-keto 45.7 11 0.00024 35.6 1.5 16 270-285 3-18 (219)
207 COG1011 Predicted hydrolase (H 44.0 14 0.0003 34.3 1.8 16 270-285 4-19 (229)
208 TIGR01545 YfhB_g-proteo haloac 43.8 13 0.00028 35.6 1.5 16 270-285 5-20 (210)
209 PRK09456 ?-D-glucose-1-phospha 42.7 14 0.0003 34.4 1.5 14 272-285 2-15 (199)
210 PF05761 5_nucleotid: 5' nucle 36.4 62 0.0013 35.1 5.4 53 306-358 179-240 (448)
211 PLN03064 alpha,alpha-trehalose 35.7 71 0.0015 37.8 6.1 71 267-346 588-660 (934)
212 PF08484 Methyltransf_14: C-me 35.2 1.1E+02 0.0024 28.4 6.2 66 311-407 53-120 (160)
213 KOG2134 Polynucleotide kinase 33.4 61 0.0013 34.8 4.6 58 268-335 73-130 (422)
214 TIGR01488 HAD-SF-IB Haloacid D 33.2 20 0.00044 31.9 1.0 13 273-285 2-14 (177)
215 PF12710 HAD: haloacid dehalog 32.2 25 0.00054 31.6 1.4 13 273-285 1-13 (192)
216 PRK10671 copA copper exporting 31.2 45 0.00098 38.5 3.6 85 310-403 650-735 (834)
217 PLN02177 glycerol-3-phosphate 31.2 39 0.00085 37.0 2.9 23 327-349 124-147 (497)
218 TIGR01490 HAD-SF-IB-hyp1 HAD-s 30.0 26 0.00056 32.2 1.1 13 273-285 2-14 (202)
219 TIGR02826 RNR_activ_nrdG3 anae 29.0 1E+02 0.0022 28.2 4.8 72 297-388 64-137 (147)
220 PLN02919 haloacid dehalogenase 26.0 39 0.00084 40.4 1.9 17 269-285 74-90 (1057)
221 cd06537 CIDE_N_B CIDE_N domain 25.6 1E+02 0.0022 26.0 3.8 16 270-285 39-54 (81)
222 cd06539 CIDE_N_A CIDE_N domain 24.6 1.1E+02 0.0023 25.7 3.7 16 270-285 40-55 (78)
223 KOG3189 Phosphomannomutase [Li 23.4 1.2E+02 0.0026 30.1 4.4 57 268-347 9-70 (252)
224 cd06536 CIDE_N_ICAD CIDE_N dom 22.9 1.2E+02 0.0026 25.5 3.7 17 269-285 41-57 (80)
225 PF00702 Hydrolase: haloacid d 22.9 47 0.001 30.2 1.5 15 271-285 2-16 (215)
226 cd06538 CIDE_N_FSP27 CIDE_N do 22.4 1.1E+02 0.0025 25.6 3.5 15 270-284 39-53 (79)
227 cd02514 GT13_GLCNAC-TI GT13_GL 22.3 84 0.0018 32.8 3.4 40 307-346 6-52 (334)
228 smart00266 CAD Domains present 22.0 1.2E+02 0.0025 25.2 3.4 16 270-285 38-53 (74)
229 COG4229 Predicted enolase-phos 21.9 79 0.0017 31.0 2.8 92 309-402 102-199 (229)
230 cd01615 CIDE_N CIDE_N domain, 21.5 1.3E+02 0.0028 25.2 3.7 17 269-285 39-55 (78)
231 KOG4549 Magnesium-dependent ph 21.5 3.6E+02 0.0077 25.0 6.7 120 269-390 4-132 (144)
232 PF06941 NT5C: 5' nucleotidase 21.2 58 0.0013 30.2 1.8 16 270-285 2-17 (191)
233 PF13701 DDE_Tnp_1_4: Transpos 20.5 2.4E+02 0.0051 30.5 6.4 83 269-351 138-242 (448)
No 1
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=100.00 E-value=1.2e-48 Score=382.98 Aligned_cols=186 Identities=57% Similarity=0.938 Sum_probs=175.1
Q ss_pred CCCCCCCCCccCCCCceEEEEecCccccccc--ccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhhccEEEEEc
Q 013428 255 NFRPTASPKETQGRKSVTLVLDLDETLVHST--LEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFT 332 (443)
Q Consensus 255 ~~~p~L~P~~~~~~kk~tLVLDLDeTLVhS~--~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Lsk~YEIVIfT 332 (443)
...|.++ ......+|++||||||||||||+ .++...++|.+++.+++..+.+||.+|||+++||++++++||++|||
T Consensus 75 ~~~~~~~-~~~~~~~kk~lVLDLDeTLvHss~~~~~~~~~d~~~~v~~~~~~~~~yV~kRP~vdeFL~~~s~~~e~v~FT 153 (262)
T KOG1605|consen 75 PLSPVLP-LRLATVGRKTLVLDLDETLVHSSLNLKPIVNADFTVPVEIDGHIHQVYVRKRPHVDEFLSRVSKWYELVLFT 153 (262)
T ss_pred cccccCC-cccccCCCceEEEeCCCcccccccccCCCCCcceeeeeeeCCcceEEEEEcCCCHHHHHHHhHHHHHHHHHH
Confidence 3344444 44457889999999999999999 77778899999999999999999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHhCCCCCeeeEEEEcccceeeCCceeecccccCCCCCcEEEEECChhhhccCCCceeeeccccCCCCc
Q 013428 333 ASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSD 412 (443)
Q Consensus 333 As~~~YAd~VLd~LDP~g~~f~~RL~Re~C~~~~g~yiKDLs~LgrDl~kVIIIDDsp~s~~~q~~NgIpI~s~~gd~~D 412 (443)
|+...||.+|++.||+.+++|++|+||++|.+.+|+|+|||+.+|+|+++||||||+|.+|.+||+|||||++|++++.|
T Consensus 154 As~~~Ya~~v~D~LD~~~~i~~~RlyR~~C~~~~g~yvKdls~~~~dL~~viIiDNsP~sy~~~p~NgIpI~sw~~d~~D 233 (262)
T KOG1605|consen 154 ASLEVYADPLLDILDPDRKIISHRLYRDSCTLKDGNYVKDLSVLGRDLSKVIIVDNSPQSYRLQPENGIPIKSWFDDPTD 233 (262)
T ss_pred hhhHHHHHHHHHHccCCCCeeeeeecccceEeECCcEEEEcceeccCcccEEEEcCChHHhccCccCCCcccccccCCCh
Confidence 99999999999999998889999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHccCCCCcHHHHHhhhCC
Q 013428 413 CSLISLLPFLDILADAEDVRPIIAKTFGN 441 (443)
Q Consensus 413 ~eLl~LlpfLe~L~~~~DVR~iL~krf~~ 441 (443)
.||++|+|||+.|+.++|||++++++|+.
T Consensus 234 ~eLL~LlpfLe~L~~~~Dvr~~l~~~~~~ 262 (262)
T KOG1605|consen 234 TELLKLLPFLEALAFVDDVRPILARRFGN 262 (262)
T ss_pred HHHHHHHHHHHHhcccccHHHHHHHhhcC
Confidence 99999999999999999999999999974
No 2
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=100.00 E-value=1.4e-40 Score=304.26 Aligned_cols=161 Identities=57% Similarity=0.931 Sum_probs=153.9
Q ss_pred ceEEEEecCcccccccccccC-CCCceEEEEecceeceEEEeeCchHHHHHHHhhhccEEEEEcCCcHHHHHHHHHHhCC
Q 013428 270 SVTLVLDLDETLVHSTLEYCD-DADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDP 348 (443)
Q Consensus 270 k~tLVLDLDeTLVhS~~~~~~-~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Lsk~YEIVIfTAs~~~YAd~VLd~LDP 348 (443)
|+||||||||||||+++.+.. ..+|.+.+.+++....+||++|||+.+||++|+++|||+|||++.+.||++|++.|||
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~~ldp 80 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSKWYELVIFTASLEEYADPVLDILDR 80 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHHHHCc
Confidence 579999999999999988765 6788888888888889999999999999999999999999999999999999999999
Q ss_pred CCCeeeEEEEcccceeeCCceeecccccCCCCCcEEEEECChhhhccCCCceeeeccccCCCCchHHHHHHHHHHHccCC
Q 013428 349 DGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCSLISLLPFLDILADA 428 (443)
Q Consensus 349 ~g~~f~~RL~Re~C~~~~g~yiKDLs~LgrDl~kVIIIDDsp~s~~~q~~NgIpI~s~~gd~~D~eLl~LlpfLe~L~~~ 428 (443)
.+.+|.+++||++|....|.|.|||+.+|+++++||||||++..|..|++|||+|.+|.|+.+|++|++|++||+.|+.+
T Consensus 81 ~~~~f~~~l~r~~~~~~~~~~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~~f~~~~~D~~L~~l~~~L~~l~~~ 160 (162)
T TIGR02251 81 GGKVISRRLYRESCVFTNGKYVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIKSWFGDPNDTELLNLIPFLEGLRFE 160 (162)
T ss_pred CCCEEeEEEEccccEEeCCCEEeEchhcCCChhhEEEEeCChhhhccCccCEeecCCCCCCCCHHHHHHHHHHHHHHhcc
Confidence 98899999999999999899999999999999999999999999999999999999999999999999999999999988
Q ss_pred CC
Q 013428 429 ED 430 (443)
Q Consensus 429 ~D 430 (443)
+|
T Consensus 161 ~~ 162 (162)
T TIGR02251 161 DD 162 (162)
T ss_pred CC
Confidence 76
No 3
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=100.00 E-value=1.2e-38 Score=286.61 Aligned_cols=158 Identities=51% Similarity=0.856 Sum_probs=130.9
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhhccEEEEEcCCcHHHHHHHHHHhCCCC
Q 013428 271 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDG 350 (443)
Q Consensus 271 ~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Lsk~YEIVIfTAs~~~YAd~VLd~LDP~g 350 (443)
|+|||||||||||+...+....++... . ....++|++|||+++||++++++|||+|||++.+.||++|++.|||.+
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~---~-~~~~~~v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~~ldp~~ 76 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKII---D-QRGGYYVKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLDALDPNG 76 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEE---T-EEEEEEEEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHHHHTTTT
T ss_pred CEEEEeCCCcEEEEeecCCCCccccee---c-cccceeEeeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHHhhhhhc
Confidence 699999999999998765543333322 2 567899999999999999999999999999999999999999999988
Q ss_pred CeeeEEEEcccceeeCCceeecccccCCCCCcEEEEECChhhhccCCCceeeeccccCC-CCchHHHHHHHHHHHccCCC
Q 013428 351 KLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDD-PSDCSLISLLPFLDILADAE 429 (443)
Q Consensus 351 ~~f~~RL~Re~C~~~~g~yiKDLs~LgrDl~kVIIIDDsp~s~~~q~~NgIpI~s~~gd-~~D~eLl~LlpfLe~L~~~~ 429 (443)
.+|.++++|++|....|.++|||+++|+++++||||||++.+|..|++|+|+|++|.++ +.|++|++|++||+.|+.++
T Consensus 77 ~~~~~~~~r~~~~~~~~~~~KdL~~l~~~~~~vvivDD~~~~~~~~~~N~i~v~~f~~~~~~D~~L~~l~~~L~~l~~~~ 156 (159)
T PF03031_consen 77 KLFSRRLYRDDCTFDKGSYIKDLSKLGRDLDNVVIVDDSPRKWALQPDNGIPVPPFFGDTPNDRELLRLLPFLEELAKED 156 (159)
T ss_dssp SSEEEEEEGGGSEEETTEEE--GGGSSS-GGGEEEEES-GGGGTTSGGGEEE----SSCHTT--HHHHHHHHHHHHHTHS
T ss_pred cccccccccccccccccccccchHHHhhccccEEEEeCCHHHeeccCCceEEeccccCCCcchhHHHHHHHHHHHhCccc
Confidence 89999999999999988889999999999999999999999999999999999999999 99999999999999999999
Q ss_pred CcH
Q 013428 430 DVR 432 (443)
Q Consensus 430 DVR 432 (443)
|||
T Consensus 157 Dvr 159 (159)
T PF03031_consen 157 DVR 159 (159)
T ss_dssp -CH
T ss_pred CCC
Confidence 998
No 4
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=100.00 E-value=3.3e-36 Score=284.58 Aligned_cols=158 Identities=23% Similarity=0.281 Sum_probs=135.9
Q ss_pred CCCceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhhccEEEEEcCCcHHHHHHHHHHh
Q 013428 267 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDIL 346 (443)
Q Consensus 267 ~~kk~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Lsk~YEIVIfTAs~~~YAd~VLd~L 346 (443)
..+|++|||||||||||+.+. ...+++.+|||+++||++++++|||+||||+++.||+.+++.|
T Consensus 18 ~~~kklLVLDLDeTLvh~~~~----------------~~~~~~~kRP~l~eFL~~~~~~feIvVwTAa~~~ya~~~l~~l 81 (195)
T TIGR02245 18 REGKKLLVLDIDYTLFDHRSP----------------AETGEELMRPYLHEFLTSAYEDYDIVIWSATSMKWIEIKMTEL 81 (195)
T ss_pred CCCCcEEEEeCCCceEccccc----------------CCCceEEeCCCHHHHHHHHHhCCEEEEEecCCHHHHHHHHHHh
Confidence 567899999999999997422 1245789999999999999999999999999999999999999
Q ss_pred CCCC-CeeeEEEEcccce------eeCCc-eeecccccC------CCCCcEEEEECChhhhccCCCceeeeccccC----
Q 013428 347 DPDG-KLISRRVYRESCI------FSDGT-YTKDLTVLG------VDLAKVAIIDNSPQVFRLQVNNGIPIESWFD---- 408 (443)
Q Consensus 347 DP~g-~~f~~RL~Re~C~------~~~g~-yiKDLs~Lg------rDl~kVIIIDDsp~s~~~q~~NgIpI~s~~g---- 408 (443)
++.+ .-+..++++++|. ...|. ++|||+.++ .++++||||||+|.++.+||+|||+|++|++
T Consensus 82 ~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKdL~~lw~~l~~~~~~~ntiiVDd~p~~~~~~P~N~i~I~~f~~~~~~ 161 (195)
T TIGR02245 82 GVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKPLGVIWALLPEFYSMKNTIMFDDLRRNFLMNPQNGLKIRPFKKAHAN 161 (195)
T ss_pred cccCCccceEEEEeccccceeeEeeccCcEEEeecHHhhhhcccCCCcccEEEEeCCHHHHhcCCCCccccCCccccCCC
Confidence 8643 2355667778883 23454 599999873 3889999999999999999999999999995
Q ss_pred CCCchHHHHHHHHHHHccCCCCcHHHHHhhhC
Q 013428 409 DPSDCSLISLLPFLDILADAEDVRPIIAKTFG 440 (443)
Q Consensus 409 d~~D~eLl~LlpfLe~L~~~~DVR~iL~krf~ 440 (443)
+..|+||+.|+|||+.|+.++|||+++.++|.
T Consensus 162 ~~~D~eL~~L~~yL~~la~~~Dvr~~~~~~w~ 193 (195)
T TIGR02245 162 RGTDQELLKLTQYLKTIAELEDFSSLDHKEWE 193 (195)
T ss_pred CcccHHHHHHHHHHHHHhcCcccchhhhcccc
Confidence 57999999999999999999999999988774
No 5
>KOG2832 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=99.97 E-value=3.7e-32 Score=273.53 Aligned_cols=156 Identities=37% Similarity=0.671 Sum_probs=148.8
Q ss_pred cCCCCceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhhccEEEEEcCCcHHHHHHHHH
Q 013428 265 TQGRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLD 344 (443)
Q Consensus 265 ~~~~kk~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Lsk~YEIVIfTAs~~~YAd~VLd 344 (443)
+..++++||||+|.++|||..|.. ..+|.+++|||++.||.+++++|||||||+....||.+|++
T Consensus 184 Py~Qp~yTLVleledvLVhpdws~---------------~tGwRf~kRPgvD~FL~~~a~~yEIVi~sse~gmt~~pl~d 248 (393)
T KOG2832|consen 184 PYEQPPYTLVLELEDVLVHPDWSY---------------KTGWRFKKRPGVDYFLGHLAKYYEIVVYSSEQGMTVFPLLD 248 (393)
T ss_pred cccCCCceEEEEeeeeEeccchhh---------------hcCceeccCchHHHHHHhhcccceEEEEecCCccchhhhHh
Confidence 346889999999999999998863 35789999999999999999999999999999999999999
Q ss_pred HhCCCCCeeeEEEEcccceeeCCceeecccccCCCCCcEEEEECChhhhccCCCceeeeccccCCCCchHHHHHHHHHHH
Q 013428 345 ILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCSLISLLPFLDI 424 (443)
Q Consensus 345 ~LDP~g~~f~~RL~Re~C~~~~g~yiKDLs~LgrDl~kVIIIDDsp~s~~~q~~NgIpI~s~~gd~~D~eLl~LlpfLe~ 424 (443)
.|||+| +|+++|||++|.+.+|.++|||+.|+||+.+||+||-.+.++.+||+|.|++++|.|+.+|+.|++|++||+.
T Consensus 249 ~lDP~g-~IsYkLfr~~t~y~~G~HvKdls~LNRdl~kVivVd~d~~~~~l~P~N~l~l~~W~Gn~dDt~L~dL~~FL~~ 327 (393)
T KOG2832|consen 249 ALDPKG-YISYKLFRGATKYEEGHHVKDLSKLNRDLQKVIVVDFDANSYKLQPENMLPLEPWSGNDDDTSLFDLLAFLEY 327 (393)
T ss_pred hcCCcc-eEEEEEecCcccccCccchhhhhhhccccceeEEEEccccccccCcccccccCcCCCCcccchhhhHHHHHHH
Confidence 999997 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccC--CCCcHHHHH
Q 013428 425 LAD--AEDVRPIIA 436 (443)
Q Consensus 425 L~~--~~DVR~iL~ 436 (443)
|+. ++|||++|+
T Consensus 328 ia~~~~eDvR~vL~ 341 (393)
T KOG2832|consen 328 IAQQQVEDVRPVLQ 341 (393)
T ss_pred HHHccHHHHHHHHH
Confidence 985 799999995
No 6
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=99.97 E-value=4e-31 Score=241.57 Aligned_cols=138 Identities=31% Similarity=0.449 Sum_probs=117.8
Q ss_pred CCCceEEEEecCcccccccccccCCCCce------------EEEEecceeceEEEeeCchHHHHHHHhhhccEEEEEcCC
Q 013428 267 GRKSVTLVLDLDETLVHSTLEYCDDADFT------------FTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTAS 334 (443)
Q Consensus 267 ~~kk~tLVLDLDeTLVhS~~~~~~~~df~------------~~i~~~~~~~~~~V~~RPgL~eFLe~Lsk~YEIVIfTAs 334 (443)
.++|++||||||+|||||+..+....... -...|......+++++|||+.+||+++++.|+++|||++
T Consensus 3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~~yel~I~T~~ 82 (156)
T TIGR02250 3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASKLYEMHVYTMG 82 (156)
T ss_pred cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHhhcEEEEEeCC
Confidence 47899999999999999997654322111 012233335678999999999999999999999999999
Q ss_pred cHHHHHHHHHHhCCCCCeeeEE-EEcccceeeCCceeeccc-ccCCCCCcEEEEECChhhhccCCCceeeecccc
Q 013428 335 QSIYAAQLLDILDPDGKLISRR-VYRESCIFSDGTYTKDLT-VLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWF 407 (443)
Q Consensus 335 ~~~YAd~VLd~LDP~g~~f~~R-L~Re~C~~~~g~yiKDLs-~LgrDl~kVIIIDDsp~s~~~q~~NgIpI~s~~ 407 (443)
.+.||++|++.|||.+.+|.+| ++|++|. |.++|||+ .+|+++++||||||+|.+|..|++|+|+|++|.
T Consensus 83 ~~~yA~~vl~~ldp~~~~F~~ri~~rd~~~---~~~~KdL~~i~~~d~~~vvivDd~~~~~~~~~~N~i~i~~~~ 154 (156)
T TIGR02250 83 TRAYAQAIAKLIDPDGKYFGDRIISRDESG---SPHTKSLLRLFPADESMVVIIDDREDVWPWHKRNLIQIEPYN 154 (156)
T ss_pred cHHHHHHHHHHhCcCCCeeccEEEEeccCC---CCccccHHHHcCCCcccEEEEeCCHHHhhcCccCEEEeCCcc
Confidence 9999999999999999899766 5699986 78999995 569999999999999999999999999999995
No 7
>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=99.95 E-value=3.7e-29 Score=256.62 Aligned_cols=175 Identities=45% Similarity=0.739 Sum_probs=166.1
Q ss_pred cCCCCceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhhccEEEEEcCCcHHHHHHHHH
Q 013428 265 TQGRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLD 344 (443)
Q Consensus 265 ~~~~kk~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Lsk~YEIVIfTAs~~~YAd~VLd 344 (443)
....++++|++|||+||+|+........+|...+...+..+.+||.+||++++||..++++|++++||++.+.||++|++
T Consensus 207 ~~~~~~k~L~l~lde~l~~S~~~~~~~~df~~~~e~~~~~~~~~v~kRp~l~~fl~~ls~~~~l~~ft~s~~~y~~~v~d 286 (390)
T COG5190 207 KSTSPKKTLVLDLDETLVHSSFRYITLLDFLVKVEISLLQHLVYVSKRPELDYFLGKLSKIHELVYFTASVKRYADPVLD 286 (390)
T ss_pred cCCCCccccccCCCccceeeccccccccchhhccccccceeEEEEcCChHHHHHHhhhhhhEEEEEEecchhhhcchHHH
Confidence 45577889999999999999988888888988888888889999999999999999999999999999999999999999
Q ss_pred HhCCCCCeeeEEEEcccceeeCCceeecccccCCCCCcEEEEECChhhhccCCCceeeeccccCCCCchHHHHHHHHHHH
Q 013428 345 ILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCSLISLLPFLDI 424 (443)
Q Consensus 345 ~LDP~g~~f~~RL~Re~C~~~~g~yiKDLs~LgrDl~kVIIIDDsp~s~~~q~~NgIpI~s~~gd~~D~eLl~LlpfLe~ 424 (443)
.|++.+ .|++++||++|....|.|+|||..+||++.+|||||++|.+|.+||+|+|+|.+|.+++.|.+|++|++||+.
T Consensus 287 ~l~~~k-~~~~~lfr~sc~~~~G~~ikDis~i~r~l~~viiId~~p~SY~~~p~~~i~i~~W~~d~~d~el~~ll~~le~ 365 (390)
T COG5190 287 ILDSDK-VFSHRLFRESCVSYLGVYIKDISKIGRSLDKVIIIDNSPASYEFHPENAIPIEKWISDEHDDELLNLLPFLED 365 (390)
T ss_pred hccccc-eeehhhhcccceeccCchhhhHHhhccCCCceEEeeCChhhhhhCccceeccCcccccccchhhhhhcccccc
Confidence 999998 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccC--CCCcHHHHHhhhC
Q 013428 425 LAD--AEDVRPIIAKTFG 440 (443)
Q Consensus 425 L~~--~~DVR~iL~krf~ 440 (443)
|.. ..||+.++..+-+
T Consensus 366 L~~~~~~d~~~~l~~~~~ 383 (390)
T COG5190 366 LPDRDLKDVSSILQSRLE 383 (390)
T ss_pred cccccchhhhhhhhhhhH
Confidence 998 8999999977644
No 8
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.94 E-value=2.8e-26 Score=206.21 Aligned_cols=145 Identities=49% Similarity=0.857 Sum_probs=130.1
Q ss_pred CceEEEEecCccccccccc---ccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhhccEEEEEcCCcHHHHHHHHHH
Q 013428 269 KSVTLVLDLDETLVHSTLE---YCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDI 345 (443)
Q Consensus 269 kk~tLVLDLDeTLVhS~~~---~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Lsk~YEIVIfTAs~~~YAd~VLd~ 345 (443)
+|++|||||||||||+... +.....+...+.+......+++++|||+.+||++|++.|+++|||++.+.||+.+++.
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il~~ 80 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASELFELVVFTAGLRMYADPVLDL 80 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHHHH
Confidence 5789999999999999632 2233455666677788889999999999999999999999999999999999999999
Q ss_pred hCCCCCeeeEEEEcccceeeCCceeecccccCCCCCcEEEEECChhhhccCCCceeeeccccCCCCch
Q 013428 346 LDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDC 413 (443)
Q Consensus 346 LDP~g~~f~~RL~Re~C~~~~g~yiKDLs~LgrDl~kVIIIDDsp~s~~~q~~NgIpI~s~~gd~~D~ 413 (443)
+++.+.+|..++++++|...++.|.|+|+++|++++++|+|||++..|..++.|||+|++|.++.+|+
T Consensus 81 l~~~~~~f~~i~~~~d~~~~KP~~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~~f~~~~~d~ 148 (148)
T smart00577 81 LDPKKYFGYRRLFRDECVFVKGKYVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIKPWFGDPDDT 148 (148)
T ss_pred hCcCCCEeeeEEECccccccCCeEeecHHHcCCChhcEEEEECCHHHhhcCccCEEEecCcCCCCCCC
Confidence 99976677999999999988777999999999999999999999999999999999999999998874
No 9
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=99.76 E-value=1.5e-18 Score=187.18 Aligned_cols=137 Identities=32% Similarity=0.465 Sum_probs=108.4
Q ss_pred CCceEEEEecCcccccccccccC--------CCCc---eEE--EEec--ceeceEEEeeCchHHHHHHHhhhccEEEEEc
Q 013428 268 RKSVTLVLDLDETLVHSTLEYCD--------DADF---TFT--VFFN--MKEHTVYVKQRPHLKTFLERVAEMFEVVIFT 332 (443)
Q Consensus 268 ~kk~tLVLDLDeTLVhS~~~~~~--------~~df---~~~--i~~~--~~~~~~~V~~RPgL~eFLe~Lsk~YEIVIfT 332 (443)
++++.||+|||.||+|+...+.. ...+ ... ..++ .....+||++|||+++||++++++||++|||
T Consensus 144 ~~~L~lv~Dld~tllh~~~~~~l~e~~~~l~~~~~~~~sn~dl~~~~~~~~~~~~~vKlRP~~~efL~~~sklfemhVyT 223 (635)
T KOG0323|consen 144 RKKLHLVLDLDHTLLHTILKSDLSETEKYLKEEAESVESNKDLFRFNPLGHDTEYLVKLRPFVHEFLKEANKLFEMHVYT 223 (635)
T ss_pred hhcceeehhhhhHHHHhhccchhhhhhhhcccccccccccccceeecccCCCceEEEEeCccHHHHHHHHHhhceeEEEe
Confidence 34479999999999999843211 0001 000 0111 3345689999999999999999999999999
Q ss_pred CCcHHHHHHHHHHhCCCCCeeeEEEE-cccceeeCCceeeccccc-CCCCCcEEEEECChhhhccCCCceeeecccc
Q 013428 333 ASQSIYAAQLLDILDPDGKLISRRVY-RESCIFSDGTYTKDLTVL-GVDLAKVAIIDNSPQVFRLQVNNGIPIESWF 407 (443)
Q Consensus 333 As~~~YAd~VLd~LDP~g~~f~~RL~-Re~C~~~~g~yiKDLs~L-grDl~kVIIIDDsp~s~~~q~~NgIpI~s~~ 407 (443)
.|.+.||..|++.|||.|+||++|++ |+. ....-.+||..+ -++.++||||||+..+|..++.|.|.|.+|.
T Consensus 224 mg~R~YA~~i~~liDP~~~lF~dRIisrde---~~~~kt~dL~~~~p~g~smvvIIDDr~dVW~~~~~nLI~i~~y~ 297 (635)
T KOG0323|consen 224 MGTRDYALEIAKLIDPEGKYFGDRIISRDE---SPFFKTLDLVLLFPCGDSMVVIIDDRSDVWPDHKRNLIQIAPYP 297 (635)
T ss_pred ccchHHHHHHHHHhCCCCccccceEEEecC---CCcccccccccCCCCCCccEEEEeCccccccCCCcceEEeeeee
Confidence 99999999999999999999999886 665 344556777766 3567889999999999999999999999984
No 10
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=98.54 E-value=2.4e-07 Score=86.81 Aligned_cols=138 Identities=14% Similarity=0.074 Sum_probs=91.9
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEec---ceeceEEEeeCchHHHHHHHhh-hccEEEEEcCC-cHHHHHHHHHH
Q 013428 271 VTLVLDLDETLVHSTLEYCDDADFTFTVFFN---MKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTAS-QSIYAAQLLDI 345 (443)
Q Consensus 271 ~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~---~~~~~~~V~~RPgL~eFLe~Ls-k~YEIVIfTAs-~~~YAd~VLd~ 345 (443)
.++|||||+||..-..-...+..+...-..+ .......+.++||+.++|+.|. +.+.+.|.|++ ...++..+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~ 82 (174)
T TIGR01685 3 RVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGT 82 (174)
T ss_pred cEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHh
Confidence 4889999999965442222222121100011 0122345888999999999998 66999999988 99999999999
Q ss_pred hCCC--C------CeeeEEEEcccceeeC--Cceeecccc-c--CCCCCcEEEEECChhhhccCCCceeeeccccC
Q 013428 346 LDPD--G------KLISRRVYRESCIFSD--GTYTKDLTV-L--GVDLAKVAIIDNSPQVFRLQVNNGIPIESWFD 408 (443)
Q Consensus 346 LDP~--g------~~f~~RL~Re~C~~~~--g~yiKDLs~-L--grDl~kVIIIDDsp~s~~~q~~NgIpI~s~~g 408 (443)
++.. | .+|+.++..+...... ....+-+.. + |.+++++++|||++..+.....+|+.+.....
T Consensus 83 ~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~~ 158 (174)
T TIGR01685 83 FEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPS 158 (174)
T ss_pred CCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcCC
Confidence 9865 1 4788777754421110 011222222 2 57889999999999988888888888766633
No 11
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=98.42 E-value=1.5e-07 Score=82.93 Aligned_cols=111 Identities=14% Similarity=0.122 Sum_probs=75.7
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh-hccEEEEEcCC-cHHHHHHHHHHhCC
Q 013428 271 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTAS-QSIYAAQLLDILDP 348 (443)
Q Consensus 271 ~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Ls-k~YEIVIfTAs-~~~YAd~VLd~LDP 348 (443)
+.||+||||||...-..... .+-. .+ . . ...||+.++|++++ +.+.++|.|++ .+.++..+++.+.+
T Consensus 1 kli~~DlD~Tl~~~~~~~~~-~~~~----~~-~--~---~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~ 69 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVG-EDPI----ID-L--E---VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFED 69 (128)
T ss_pred CEEEEeCCCCCCCCCccccc-CCcc----hh-h--H---HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccc
Confidence 37899999999866210000 0000 00 0 0 56899999999998 56999999999 89999999998762
Q ss_pred ------CCCeeeEEEEcccceeeCCceeecccccC--CCCCcEEEEECChhhh
Q 013428 349 ------DGKLISRRVYRESCIFSDGTYTKDLTVLG--VDLAKVAIIDNSPQVF 393 (443)
Q Consensus 349 ------~g~~f~~RL~Re~C~~~~g~yiKDLs~Lg--rDl~kVIIIDDsp~s~ 393 (443)
-..+|......+.- .....|.+-+.++| ..++++++|||++...
T Consensus 70 ~~~i~~l~~~f~~~~~~~~~-pkp~~~~~a~~~lg~~~~p~~~l~igDs~~n~ 121 (128)
T TIGR01681 70 FGIIFPLAEYFDPLTIGYWL-PKSPRLVEIALKLNGVLKPKSILFVDDRPDNN 121 (128)
T ss_pred cccchhhHhhhhhhhhcCCC-cHHHHHHHHHHHhcCCCCcceEEEECCCHhHH
Confidence 12245554443221 12235666777889 9999999999998753
No 12
>COG4996 Predicted phosphatase [General function prediction only]
Probab=98.35 E-value=1.6e-06 Score=78.38 Aligned_cols=133 Identities=17% Similarity=0.080 Sum_probs=94.9
Q ss_pred EEEEecCcccccccccccCCCCceEEEE---ec--ceeceEEEeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHH
Q 013428 272 TLVLDLDETLVHSTLEYCDDADFTFTVF---FN--MKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDI 345 (443)
Q Consensus 272 tLVLDLDeTLVhS~~~~~~~~df~~~i~---~~--~~~~~~~V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~ 345 (443)
.+|||+|+||-. +.+-..+.-|.. .+ ....+.-|.+||++.+||+++. ..|-+..+|.....-|-++|.+
T Consensus 2 ~i~~d~d~t~wd----hh~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLra 77 (164)
T COG4996 2 AIVFDADKTLWD----HHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRA 77 (164)
T ss_pred cEEEeCCCcccc----cccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHH
Confidence 579999999954 333222221111 01 1234567999999999999999 5699999999999999999999
Q ss_pred hCCCCCeeeEEEEcccceeeCCceeeccccc------CCCCCcEEEEECChhhh---ccCCCceeeeccccCCC
Q 013428 346 LDPDGKLISRRVYRESCIFSDGTYTKDLTVL------GVDLAKVAIIDNSPQVF---RLQVNNGIPIESWFDDP 410 (443)
Q Consensus 346 LDP~g~~f~~RL~Re~C~~~~g~yiKDLs~L------grDl~kVIIIDDsp~s~---~~q~~NgIpI~s~~gd~ 410 (443)
||... ||.+.....|-. ...+..+-|+.+ ...+.++|.+||+...+ +....|.=.++.|.+-.
T Consensus 78 l~~~~-yFhy~ViePhP~-K~~ML~~llr~i~~er~~~ikP~~Ivy~DDR~iH~~~Iwe~~G~V~~~~~~~Di~ 149 (164)
T COG4996 78 LDLLQ-YFHYIVIEPHPY-KFLMLSQLLREINTERNQKIKPSEIVYLDDRRIHFGNIWEYLGNVKCLEMWKDIS 149 (164)
T ss_pred hchhh-hEEEEEecCCCh-hHHHHHHHHHHHHHhhccccCcceEEEEecccccHHHHHHhcCCeeeeEeecchH
Confidence 99986 898887766622 222223333333 45788999999999766 44677888888887653
No 13
>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=98.31 E-value=3.5e-07 Score=95.15 Aligned_cols=137 Identities=30% Similarity=0.446 Sum_probs=103.2
Q ss_pred CCCceEEEEecCcccccccccccC----------CCCceEEEEecceeceEEEeeCchHHHHHHHhhhccEEEEEcCCcH
Q 013428 267 GRKSVTLVLDLDETLVHSTLEYCD----------DADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQS 336 (443)
Q Consensus 267 ~~kk~tLVLDLDeTLVhS~~~~~~----------~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Lsk~YEIVIfTAs~~ 336 (443)
..++..||.|+|.|.+|+...+.. ...+.....+......+++++||++..|+...++.|++.+||.+.+
T Consensus 23 q~~~~~l~~~~~~~~~h~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l~~~~~~i~~~~e~~~~~~~~~ 102 (390)
T COG5190 23 QDKKLILVVDLDQTIIHTTVDPNDPNNVNQSLERTLKSVNDRDPVQEKCAYYVKARPKLFPFLTKISPLYELHIYTMGTR 102 (390)
T ss_pred cCcccccccccccceecccccCCCCCchhhhhhccccchhccccccccccceeeecccccchhhhhchhcceeeEeeccc
Confidence 456789999999999999865511 0011111112223456889999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCeeeEEEEcccceeeCCceeeccccc-CCCCCcEEEEECChhhhcc--CCCceeeecc
Q 013428 337 IYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVL-GVDLAKVAIIDNSPQVFRL--QVNNGIPIES 405 (443)
Q Consensus 337 ~YAd~VLd~LDP~g~~f~~RL~Re~C~~~~g~yiKDLs~L-grDl~kVIIIDDsp~s~~~--q~~NgIpI~s 405 (443)
.||+.+.+++||.|++|..|....+ ...+.-.|-++++ ..+...++++||++..|.- --.|.++..+
T Consensus 103 ~~~~~~~~i~d~~g~~~~d~~~~~~--~~~~~~~~s~~~l~p~~~n~~vi~~d~~~~~~~~d~~~~~v~~~~ 172 (390)
T COG5190 103 AYAERIAKIIDPTGKLFNDRILSRD--ESGSLSQKSLSRLFPKDQNMVVIIDDRGDVWGVGDMNSNFVAKSP 172 (390)
T ss_pred cchhhhhhccccccccccccccccc--ccccchhhhhhhcCccccccccccccccccCCccchhhhhhcccc
Confidence 9999999999999999988776322 2345567778776 6788999999999999922 1235666666
No 14
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=98.23 E-value=5.7e-07 Score=84.38 Aligned_cols=95 Identities=13% Similarity=0.126 Sum_probs=79.1
Q ss_pred EeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEcccceee---CCceeecccccCCCCCcEE
Q 013428 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGVDLAKVA 384 (443)
Q Consensus 309 V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~C~~~---~g~yiKDLs~LgrDl~kVI 384 (443)
+...||+.++|++|+ +.+.++|.|++.+.++..+++.++-.. +|+..+..+.+... ...|.+-+..+|.++++++
T Consensus 81 ~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~-~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~ 159 (214)
T PRK13288 81 VTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDE-FFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEAL 159 (214)
T ss_pred cccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChh-ceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHEE
Confidence 567899999999998 469999999999999999999998775 89888887765432 2356677788899999999
Q ss_pred EEECChhhhccCCCceeeec
Q 013428 385 IIDNSPQVFRLQVNNGIPIE 404 (443)
Q Consensus 385 IIDDsp~s~~~q~~NgIpI~ 404 (443)
+|+|++.-+.....+|++..
T Consensus 160 ~iGDs~~Di~aa~~aG~~~i 179 (214)
T PRK13288 160 MVGDNHHDILAGKNAGTKTA 179 (214)
T ss_pred EECCCHHHHHHHHHCCCeEE
Confidence 99999987777667787654
No 15
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.21 E-value=1e-06 Score=73.61 Aligned_cols=108 Identities=20% Similarity=0.286 Sum_probs=74.4
Q ss_pred EEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhhc-cEEEEEcCCcHHHHHHHHHHhCCCC
Q 013428 272 TLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDILDPDG 350 (443)
Q Consensus 272 tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Lsk~-YEIVIfTAs~~~YAd~VLd~LDP~g 350 (443)
++|||+||||+........ ...+..+|++.+||+++.+. +.++|.|++.+.++..+++.+....
T Consensus 1 ~~vfD~D~tl~~~~~~~~~---------------~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~ 65 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAE---------------IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDD 65 (139)
T ss_pred CeEEccCCceEccCccccc---------------cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCch
Confidence 4799999999876421100 22367899999999999965 9999999999999999999986543
Q ss_pred CeeeEEEEcccceee----------------C---CceeecccccCCCCCcEEEEECChhhhcc
Q 013428 351 KLISRRVYRESCIFS----------------D---GTYTKDLTVLGVDLAKVAIIDNSPQVFRL 395 (443)
Q Consensus 351 ~~f~~RL~Re~C~~~----------------~---g~yiKDLs~LgrDl~kVIIIDDsp~s~~~ 395 (443)
++..++..+..... . ..+.+-+..++...+.+++|+|++.-...
T Consensus 66 -~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~ 128 (139)
T cd01427 66 -YFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEM 128 (139)
T ss_pred -hhhheeccchhhhhcccccccccccccccCCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHH
Confidence 34444443322111 1 11223334556778999999999965543
No 16
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=98.17 E-value=5.9e-07 Score=86.09 Aligned_cols=93 Identities=15% Similarity=0.164 Sum_probs=76.6
Q ss_pred EeeCchHHHHHHHhhh-ccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEcccceeeC---CceeecccccCCCCCcEE
Q 013428 309 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 384 (443)
Q Consensus 309 V~~RPgL~eFLe~Lsk-~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~C~~~~---g~yiKDLs~LgrDl~kVI 384 (443)
+...||+.++|+.|.+ .+.+.|-|++.+.++...++.++-.. +|+..+..+.....+ ..|.+-+.++|.++++++
T Consensus 92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~-~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l 170 (224)
T PRK14988 92 AVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDA-HLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAERTL 170 (224)
T ss_pred CCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHH-HCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHHEE
Confidence 5678999999999995 69999999999999999999887654 788888765543322 246677788999999999
Q ss_pred EEECChhhhccCCCceee
Q 013428 385 IIDNSPQVFRLQVNNGIP 402 (443)
Q Consensus 385 IIDDsp~s~~~q~~NgIp 402 (443)
+|+|++.-......+|+.
T Consensus 171 ~igDs~~di~aA~~aG~~ 188 (224)
T PRK14988 171 FIDDSEPILDAAAQFGIR 188 (224)
T ss_pred EEcCCHHHHHHHHHcCCe
Confidence 999999888777778885
No 17
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=98.16 E-value=2.2e-06 Score=74.67 Aligned_cols=114 Identities=20% Similarity=0.205 Sum_probs=77.9
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh-hccEEEEEcCCc--------HHHHHH
Q 013428 271 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQ--------SIYAAQ 341 (443)
Q Consensus 271 ~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Ls-k~YEIVIfTAs~--------~~YAd~ 341 (443)
+.|+||+||||++.... . .........|++.++|++|. +.|.++|.|++. ..++..
T Consensus 1 k~~~~D~dgtL~~~~~~--~-------------~~~~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~ 65 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPY--V-------------DDEDERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVAR 65 (132)
T ss_pred CEEEEeCCCceecCCCC--C-------------CCHHHheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHH
Confidence 37899999999963100 0 00112467899999999998 559999999999 888999
Q ss_pred HHHHhCCCCCeeeEEEEcccce-eeCCceeeccccc-CCCCCcEEEEEC-ChhhhccCCCceee
Q 013428 342 LLDILDPDGKLISRRVYRESCI-FSDGTYTKDLTVL-GVDLAKVAIIDN-SPQVFRLQVNNGIP 402 (443)
Q Consensus 342 VLd~LDP~g~~f~~RL~Re~C~-~~~g~yiKDLs~L-grDl~kVIIIDD-sp~s~~~q~~NgIp 402 (443)
+++.+... +...++..... .....|.+-++.+ +.+++++++|+| ...-......+|+.
T Consensus 66 ~l~~~~l~---~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 66 RLEELGVP---IDVLYACPHCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred HHHHCCCC---EEEEEECCCCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 99998764 22223332111 1123556777788 599999999999 56655554555554
No 18
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=98.06 E-value=1.3e-06 Score=86.81 Aligned_cols=95 Identities=11% Similarity=0.078 Sum_probs=71.9
Q ss_pred EeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEcccceeeCCceeecccccCCCCCcEEEEE
Q 013428 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIID 387 (443)
Q Consensus 309 V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~C~~~~g~yiKDLs~LgrDl~kVIIID 387 (443)
+...||+.++|++|. +.+.+.|.|++...++..+++.++... +|+..+..+........+.+-+.+++.+.+++++|+
T Consensus 141 ~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~-~F~~vi~~~~~~~k~~~~~~~l~~~~~~p~~~l~IG 219 (273)
T PRK13225 141 LQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRS-LFSVVQAGTPILSKRRALSQLVAREGWQPAAVMYVG 219 (273)
T ss_pred CCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChh-heEEEEecCCCCCCHHHHHHHHHHhCcChhHEEEEC
Confidence 456799999999998 569999999999999999999998765 787765543321112234444566788889999999
Q ss_pred CChhhhccCCCceeeec
Q 013428 388 NSPQVFRLQVNNGIPIE 404 (443)
Q Consensus 388 Dsp~s~~~q~~NgIpI~ 404 (443)
|++.-.......|+...
T Consensus 220 Ds~~Di~aA~~AG~~~I 236 (273)
T PRK13225 220 DETRDVEAARQVGLIAV 236 (273)
T ss_pred CCHHHHHHHHHCCCeEE
Confidence 99987766556676653
No 19
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.05 E-value=1.1e-05 Score=81.40 Aligned_cols=123 Identities=14% Similarity=0.156 Sum_probs=85.6
Q ss_pred CCCceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeC-chHHHHHHHhhhc-cEEEEEcCCcHHHHHHHHH
Q 013428 267 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQR-PHLKTFLERVAEM-FEVVIFTASQSIYAAQLLD 344 (443)
Q Consensus 267 ~~kk~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~R-PgL~eFLe~Lsk~-YEIVIfTAs~~~YAd~VLd 344 (443)
...++.+|+||||||+.... -|.+| ||+.++|++|.+. +.++|||++.+.++..+++
T Consensus 123 ~~~~kvIvFDLDgTLi~~~~---------------------~v~irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~ 181 (301)
T TIGR01684 123 FEPPHVVVFDLDSTLITDEE---------------------PVRIRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMR 181 (301)
T ss_pred cccceEEEEecCCCCcCCCC---------------------ccccCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHH
Confidence 35567999999999987632 26789 9999999999965 8999999999999999999
Q ss_pred HhCCCCCeeeEEEEcccceee----------------CCceeecc-----------------cccCCCC-CcEEEEECCh
Q 013428 345 ILDPDGKLISRRVYRESCIFS----------------DGTYTKDL-----------------TVLGVDL-AKVAIIDNSP 390 (443)
Q Consensus 345 ~LDP~g~~f~~RL~Re~C~~~----------------~g~yiKDL-----------------s~LgrDl-~kVIIIDDsp 390 (443)
.++..+ +|...+..++.... ...+..|. .+.|..- +-+-+|||-+
T Consensus 182 ~lGLd~-YFdvIIs~Gdv~~~kp~~e~~d~~~~~~~~~~~f~~d~~~~~~lPKSprvvl~yL~~~gvn~~KtitLVDDl~ 260 (301)
T TIGR01684 182 KVKLDR-YFDIIISGGHKAEEYSTMSTEDRQYRYVFTKTPFYLNTTDGKRLPKSPRVVLWYLYDLGVNYFKSITLVDDLA 260 (301)
T ss_pred HcCCCc-ccCEEEECCccccCCCCccccccccceEEecCCeEEeCCCCCcCCCCCeehHHHHHHcCCceeeeEEEeccCc
Confidence 999986 77766664443321 12233333 2234444 3356888877
Q ss_pred hhhccCCCceeeeccccCCCCc
Q 013428 391 QVFRLQVNNGIPIESWFDDPSD 412 (443)
Q Consensus 391 ~s~~~q~~NgIpI~s~~gd~~D 412 (443)
.. .+.-+|-+.++..-...+|
T Consensus 261 ~N-n~~YD~fv~v~rcp~P~~D 281 (301)
T TIGR01684 261 DN-NFNYDYFVNVSRCPVPVND 281 (301)
T ss_pred cc-CccceeEEEeeeCCCCchH
Confidence 53 2345677777666544444
No 20
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=98.02 E-value=2.2e-05 Score=79.37 Aligned_cols=123 Identities=16% Similarity=0.192 Sum_probs=87.4
Q ss_pred CCCceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeC-chHHHHHHHhhh-ccEEEEEcCCcHHHHHHHHH
Q 013428 267 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQR-PHLKTFLERVAE-MFEVVIFTASQSIYAAQLLD 344 (443)
Q Consensus 267 ~~kk~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~R-PgL~eFLe~Lsk-~YEIVIfTAs~~~YAd~VLd 344 (443)
...++.+|+||||||+.... -|.+| |++.++|++|++ .+.++|+|++.++++..+++
T Consensus 125 ~~~~~~i~~D~D~TL~~~~~---------------------~v~irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le 183 (303)
T PHA03398 125 WEIPHVIVFDLDSTLITDEE---------------------PVRIRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLK 183 (303)
T ss_pred eeeccEEEEecCCCccCCCC---------------------ccccCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHH
Confidence 35677999999999997632 16789 999999999995 69999999999999999999
Q ss_pred HhCCCCCeeeEEEEcccceee----------------CCceeeccc-----------------ccCCCCC-cEEEEECCh
Q 013428 345 ILDPDGKLISRRVYRESCIFS----------------DGTYTKDLT-----------------VLGVDLA-KVAIIDNSP 390 (443)
Q Consensus 345 ~LDP~g~~f~~RL~Re~C~~~----------------~g~yiKDLs-----------------~LgrDl~-kVIIIDDsp 390 (443)
.++..+ +|...+..++.... ...+..|.. +.|..-- -+-+|||-+
T Consensus 184 ~lgL~~-yFDvII~~g~i~~k~~~~~~~d~~~~~~~~~~~f~~d~~~~~~lPKSprvVl~yL~~~gvn~~KtiTLVDDl~ 262 (303)
T PHA03398 184 ETKLEG-YFDIIICGGRKAGEYSRRVIVDNKYKMVFVKKPFYLDVTDVKNLPKSPRVVLWYLRKKGVNYFKTITLVDDLK 262 (303)
T ss_pred HcCCCc-cccEEEECCCcccccccceeecccceeEEecCceeEeCCcccCCCCCCeehHHHHHHcCcceeccEEEeccCc
Confidence 999875 77766665543322 122333333 2244443 356778776
Q ss_pred hhhccCCCceeeeccccCCCCc
Q 013428 391 QVFRLQVNNGIPIESWFDDPSD 412 (443)
Q Consensus 391 ~s~~~q~~NgIpI~s~~gd~~D 412 (443)
.. .+.-+|-+.++..-...+|
T Consensus 263 ~N-n~~YD~fv~v~rcp~P~~D 283 (303)
T PHA03398 263 SN-NYSYDYFVNVKRCPEPVND 283 (303)
T ss_pred cc-CccceeEEEeeeCCCCcHH
Confidence 53 4567778888777655554
No 21
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=98.01 E-value=7.7e-06 Score=75.31 Aligned_cols=115 Identities=15% Similarity=0.172 Sum_probs=77.0
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh-hccEEEEEcCCcH-------------
Q 013428 271 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQS------------- 336 (443)
Q Consensus 271 ~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~------------- 336 (443)
+.|+||+||||+-.. +|. ...--+.+.||+.++|++|+ +.|.++|.|++..
T Consensus 2 ~~~~~D~Dgtl~~~~-------~~~--------~~~~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~ 66 (176)
T TIGR00213 2 KAIFLDRDGTINIDH-------GYV--------HEIDNFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQ 66 (176)
T ss_pred CEEEEeCCCCEeCCC-------CCC--------CCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHH
Confidence 578999999998321 110 00112456799999999998 5599999999884
Q ss_pred --HHHHHHHHHhCCCCCeeeEEEEcc-----------cceee---CCceeecccccCCCCCcEEEEECChhhhccCCCce
Q 013428 337 --IYAAQLLDILDPDGKLISRRVYRE-----------SCIFS---DGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNG 400 (443)
Q Consensus 337 --~YAd~VLd~LDP~g~~f~~RL~Re-----------~C~~~---~g~yiKDLs~LgrDl~kVIIIDDsp~s~~~q~~Ng 400 (443)
.|...++..+... |...++.. .|... .+.|.+-++++|.+++++++|+|++.-......+|
T Consensus 67 ~~~~~~~~l~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG 143 (176)
T TIGR00213 67 LTEWMDWSLAERDVD---LDGIYYCPHHPEGVEEFRQVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAK 143 (176)
T ss_pred HHHHHHHHHHHcCCC---ccEEEECCCCCcccccccCCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCC
Confidence 3444555544332 44444432 22211 23566777888999999999999998776666677
Q ss_pred eee
Q 013428 401 IPI 403 (443)
Q Consensus 401 IpI 403 (443)
+..
T Consensus 144 ~~~ 146 (176)
T TIGR00213 144 VKT 146 (176)
T ss_pred CcE
Confidence 754
No 22
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=97.99 E-value=3.5e-06 Score=80.65 Aligned_cols=96 Identities=11% Similarity=0.016 Sum_probs=75.9
Q ss_pred EEeeCchHHHHHHHhhh-ccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEcccceee---CCceeecccccCCCCCcE
Q 013428 308 YVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGVDLAKV 383 (443)
Q Consensus 308 ~V~~RPgL~eFLe~Lsk-~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~C~~~---~g~yiKDLs~LgrDl~kV 383 (443)
.+...||+.++|++|++ .+.+.|.|++...++..+++.++-.+ +|...+..+++... ...|.+-++++|.+++++
T Consensus 93 ~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~ 171 (229)
T PRK13226 93 QSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQ-RCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDC 171 (229)
T ss_pred cCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchh-cccEEEecCcCCCCCCCHHHHHHHHHHhCCChhhE
Confidence 36789999999999985 58999999999999999999987765 67766666654332 224667788899999999
Q ss_pred EEEECChhhhccCCCceeeec
Q 013428 384 AIIDNSPQVFRLQVNNGIPIE 404 (443)
Q Consensus 384 IIIDDsp~s~~~q~~NgIpI~ 404 (443)
++|+|++.-.......|+...
T Consensus 172 l~IGDs~~Di~aA~~aG~~~i 192 (229)
T PRK13226 172 VYVGDDERDILAARAAGMPSV 192 (229)
T ss_pred EEeCCCHHHHHHHHHCCCcEE
Confidence 999999987766556666653
No 23
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=97.96 E-value=2.3e-06 Score=80.33 Aligned_cols=96 Identities=14% Similarity=0.216 Sum_probs=69.9
Q ss_pred EeeCchHHHHHHHhhh-ccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEcccce-----------e--eCCceeeccc
Q 013428 309 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCI-----------F--SDGTYTKDLT 374 (443)
Q Consensus 309 V~~RPgL~eFLe~Lsk-~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~C~-----------~--~~g~yiKDLs 374 (443)
+..+||+.+||+.+.+ .+.++|.|++...++..+++.+.-.. +|...+.-++-. . ....+.+-++
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 162 (219)
T TIGR00338 84 LPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDA-AFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILLR 162 (219)
T ss_pred CCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCc-eEeeEEEEECCEEEEEecCcccCCcccHHHHHHHHH
Confidence 5689999999999995 69999999999999999999987765 665544322111 0 0112334455
Q ss_pred ccCCCCCcEEEEECChhhhccCCCceeeeccc
Q 013428 375 VLGVDLAKVAIIDNSPQVFRLQVNNGIPIESW 406 (443)
Q Consensus 375 ~LgrDl~kVIIIDDsp~s~~~q~~NgIpI~s~ 406 (443)
++|.+++++++|+|++.-.......|+++ .|
T Consensus 163 ~~~~~~~~~i~iGDs~~Di~aa~~ag~~i-~~ 193 (219)
T TIGR00338 163 KEGISPENTVAVGDGANDLSMIKAAGLGI-AF 193 (219)
T ss_pred HcCCCHHHEEEEECCHHHHHHHHhCCCeE-Ee
Confidence 67889999999999987776655566766 34
No 24
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=97.93 E-value=2.5e-05 Score=73.06 Aligned_cols=117 Identities=16% Similarity=0.192 Sum_probs=63.8
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEecce------eceEEEeeCchHHHHHHHhh-hccEEEEEcC-CcHHHHHH
Q 013428 270 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMK------EHTVYVKQRPHLKTFLERVA-EMFEVVIFTA-SQSIYAAQ 341 (443)
Q Consensus 270 k~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~------~~~~~V~~RPgL~eFLe~Ls-k~YEIVIfTA-s~~~YAd~ 341 (443)
++.+|||||.||-..-.... ...|+..... ..+.-|.+-|++.+.|+.|. +..+|.+.|. ..+..|.+
T Consensus 3 PklvvFDLD~TlW~~~~~~~----~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~ 78 (169)
T PF12689_consen 3 PKLVVFDLDYTLWPPWMDTH----VGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARE 78 (169)
T ss_dssp -SEEEE-STTTSSSS-TTTS----S-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHH
T ss_pred CcEEEEcCcCCCCchhHhhc----cCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHH
Confidence 56999999999955432221 2222222111 24556999999999999999 5799999995 57889999
Q ss_pred HHHHhCCC-----C----CeeeEEEEcccceeeCCceeecc-cccCCCCCcEEEEECChhhh
Q 013428 342 LLDILDPD-----G----KLISRRVYRESCIFSDGTYTKDL-TVLGVDLAKVAIIDNSPQVF 393 (443)
Q Consensus 342 VLd~LDP~-----g----~~f~~RL~Re~C~~~~g~yiKDL-s~LgrDl~kVIIIDDsp~s~ 393 (443)
+|+.|+.. + .+|.+.-.-.+ .+..+++.| +..|.+.+.++++||.....
T Consensus 79 ~L~~l~i~~~~~~~~~~~~~F~~~eI~~g---sK~~Hf~~i~~~tgI~y~eMlFFDDe~~N~ 137 (169)
T PF12689_consen 79 LLKLLEIDDADGDGVPLIEYFDYLEIYPG---SKTTHFRRIHRKTGIPYEEMLFFDDESRNI 137 (169)
T ss_dssp HHHHTT-C----------CCECEEEESSS----HHHHHHHHHHHH---GGGEEEEES-HHHH
T ss_pred HHHhcCCCccccccccchhhcchhheecC---chHHHHHHHHHhcCCChhHEEEecCchhcc
Confidence 99999877 0 14443221111 111233333 35699999999999998654
No 25
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=97.91 E-value=1.1e-05 Score=72.18 Aligned_cols=117 Identities=20% Similarity=0.248 Sum_probs=77.9
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh-hccEEEEEcCCcH-------------
Q 013428 271 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQS------------- 336 (443)
Q Consensus 271 ~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~------------- 336 (443)
++|+||+||||+........ ...-.+...||+.++|++|. +.|.++|.|++.+
T Consensus 1 ~~~~~d~dgtl~~~~~~~~~-------------~~~~~~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~ 67 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSDYP-------------RSLDDWQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRA 67 (147)
T ss_pred CeEEEeCCCceeccCCcccC-------------CCHHHeEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHH
Confidence 37899999999987532110 00111467899999999998 6699999999874
Q ss_pred --HHHHHHHHHhCCCCCeeeEEEEc-----ccc--e-eeCCceeecccccCCCCCcEEEEECChhhhccCCCceeee
Q 013428 337 --IYAAQLLDILDPDGKLISRRVYR-----ESC--I-FSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPI 403 (443)
Q Consensus 337 --~YAd~VLd~LDP~g~~f~~RL~R-----e~C--~-~~~g~yiKDLs~LgrDl~kVIIIDDsp~s~~~q~~NgIpI 403 (443)
.++..+++.++.. +...++. +.. . .....|.+-+..+|.+++++++|.|++.-.......||..
T Consensus 68 ~~~~~~~~l~~~~l~---~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~ 141 (147)
T TIGR01656 68 PNGRVLELLRQLGVA---VDGVLFCPHHPADNCSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAA 141 (147)
T ss_pred HHHHHHHHHHhCCCc---eeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCE
Confidence 5677777777654 2222222 111 1 1123455666778999999999999987776655566653
No 26
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=97.86 E-value=3.4e-05 Score=71.08 Aligned_cols=122 Identities=16% Similarity=0.146 Sum_probs=86.7
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhh-ccEEEEEcCC---------------
Q 013428 271 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTAS--------------- 334 (443)
Q Consensus 271 ~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Lsk-~YEIVIfTAs--------------- 334 (443)
+.|+||.||||++.... .|. . ...-.+..-||+.++|++|.+ .|.++|.|+.
T Consensus 2 ~~~~~d~dg~l~~~~~~-----~~~-----~--~~~~~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~ 69 (161)
T TIGR01261 2 KILFIDRDGTLIEEPPS-----DFQ-----V--DALEKLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDG 69 (161)
T ss_pred CEEEEeCCCCccccCCC-----ccc-----c--CCHHHeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHH
Confidence 58999999999884311 110 0 011136778999999999995 6999999996
Q ss_pred cHHHHHHHHHHhCCCCCeeeEEEEc-----ccceeeC---CceeecccccCCCCCcEEEEECChhhhccCCCceeeeccc
Q 013428 335 QSIYAAQLLDILDPDGKLISRRVYR-----ESCIFSD---GTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESW 406 (443)
Q Consensus 335 ~~~YAd~VLd~LDP~g~~f~~RL~R-----e~C~~~~---g~yiKDLs~LgrDl~kVIIIDDsp~s~~~q~~NgIpI~s~ 406 (443)
...++..+++.++.. |...++. +.+.... +.+..-++.+|.+++++++|.|+..-......+|+....+
T Consensus 70 ~~~~~~~~l~~~gl~---fd~ii~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~ 146 (161)
T TIGR01261 70 PHNLMLQIFRSQGII---FDDVLICPHFPDDNCDCRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQY 146 (161)
T ss_pred HHHHHHHHHHHCCCc---eeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEE
Confidence 356888888888875 6666653 4443332 2344556677889999999999987776666788876655
Q ss_pred c
Q 013428 407 F 407 (443)
Q Consensus 407 ~ 407 (443)
.
T Consensus 147 ~ 147 (161)
T TIGR01261 147 D 147 (161)
T ss_pred C
Confidence 4
No 27
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=97.84 E-value=3.7e-06 Score=80.74 Aligned_cols=99 Identities=17% Similarity=0.209 Sum_probs=85.1
Q ss_pred EeeCchHHHHHHHhhhc-cEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEcccceee---CCceeecccccCCCCCcEE
Q 013428 309 VKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGVDLAKVA 384 (443)
Q Consensus 309 V~~RPgL~eFLe~Lsk~-YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~C~~~---~g~yiKDLs~LgrDl~kVI 384 (443)
+...||+.+||+.|... .-+.+-|++.+..+..+++.+...+ +|..++++++.... ...|.+-..+||.+++++|
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~-~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~~Cv 163 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLD-YFDVIVTADDVARGKPAPDIYLLAAERLGVDPEECV 163 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChh-hcchhccHHHHhcCCCCCHHHHHHHHHcCCChHHeE
Confidence 78999999999999966 9999999999999999999999886 89999998776654 3468899999999999999
Q ss_pred EEECChhhhccCCCceeeeccccC
Q 013428 385 IIDNSPQVFRLQVNNGIPIESWFD 408 (443)
Q Consensus 385 IIDDsp~s~~~q~~NgIpI~s~~g 408 (443)
+|+|++.-......-|+.+..+.+
T Consensus 164 viEDs~~Gi~Aa~aAGm~vv~v~~ 187 (221)
T COG0637 164 VVEDSPAGIQAAKAAGMRVVGVPA 187 (221)
T ss_pred EEecchhHHHHHHHCCCEEEEecC
Confidence 999999877666666777666655
No 28
>PHA02597 30.2 hypothetical protein; Provisional
Probab=97.84 E-value=2.8e-06 Score=78.69 Aligned_cols=96 Identities=13% Similarity=0.113 Sum_probs=67.8
Q ss_pred EeeCchHHHHHHHhhhccEEEEEcCCcHHHHHHHHHHhCCCC---CeeeEEEEcccceeeCCceeecccccCCCCCcEEE
Q 013428 309 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDG---KLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAI 385 (443)
Q Consensus 309 V~~RPgL~eFLe~Lsk~YEIVIfTAs~~~YAd~VLd~LDP~g---~~f~~RL~Re~C~~~~g~yiKDLs~LgrDl~kVII 385 (443)
+...||+.++|++|.+.+.+++-|++.......+++.+...+ .+|+..+..+........|.+-++.+| ++.+|+
T Consensus 73 ~~~~pG~~e~L~~L~~~~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~~~kp~~~~~a~~~~~--~~~~v~ 150 (197)
T PHA02597 73 LSAYDDALDVINKLKEDYDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHDESKEKLFIKAKEKYG--DRVVCF 150 (197)
T ss_pred ccCCCCHHHHHHHHHhcCCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccCcccHHHHHHHHHHhC--CCcEEE
Confidence 668999999999999878877777766655555666654332 256666665554333334555667778 678999
Q ss_pred EECChhhhccCCCc--eeeeccc
Q 013428 386 IDNSPQVFRLQVNN--GIPIESW 406 (443)
Q Consensus 386 IDDsp~s~~~q~~N--gIpI~s~ 406 (443)
|||++........+ ||+..-+
T Consensus 151 vgDs~~di~aA~~a~~Gi~~i~~ 173 (197)
T PHA02597 151 VDDLAHNLDAAHEALSQLPVIHM 173 (197)
T ss_pred eCCCHHHHHHHHHHHcCCcEEEe
Confidence 99999988777777 8876654
No 29
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=97.82 E-value=3.4e-05 Score=71.14 Aligned_cols=116 Identities=15% Similarity=0.098 Sum_probs=77.1
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhh-ccEEEEEcCCcH------------
Q 013428 270 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQS------------ 336 (443)
Q Consensus 270 k~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Lsk-~YEIVIfTAs~~------------ 336 (443)
.+.|+||+||||+-.... | ..... .+...||+.++|++|++ .|.++|.|++..
T Consensus 3 ~~~~~~d~~~t~~~~~~~------~------~~~~~--~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~ 68 (181)
T PRK08942 3 MKAIFLDRDGVINVDSDG------Y------VKSPD--EWIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLN 68 (181)
T ss_pred ccEEEEECCCCcccCCcc------c------cCCHH--HeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHH
Confidence 368999999999654210 1 11111 24578999999999996 599999998863
Q ss_pred ---HHHHHHHHHhCCCCCeeeEEEEcccc-----eee---CCceeecccccCCCCCcEEEEECChhhhccCCCceee
Q 013428 337 ---IYAAQLLDILDPDGKLISRRVYRESC-----IFS---DGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIP 402 (443)
Q Consensus 337 ---~YAd~VLd~LDP~g~~f~~RL~Re~C-----~~~---~g~yiKDLs~LgrDl~kVIIIDDsp~s~~~q~~NgIp 402 (443)
.+...+++.++. +|...++...+ ... ...|.+-+..+|.+++++++|+|++.-.......|+.
T Consensus 69 ~~~~~~~~~l~~~g~---~f~~i~~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~ 142 (181)
T PRK08942 69 ALHEKMDWSLADRGG---RLDGIYYCPHHPEDGCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVT 142 (181)
T ss_pred HHHHHHHHHHHHcCC---ccceEEECCCCCCCCCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCe
Confidence 333444554432 36666654322 111 2356677788899999999999999766555556654
No 30
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=97.78 E-value=3.8e-05 Score=77.59 Aligned_cols=108 Identities=18% Similarity=0.146 Sum_probs=75.1
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEecceeceE-EEeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHH--
Q 013428 270 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTV-YVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDI-- 345 (443)
Q Consensus 270 k~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~-~V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~-- 345 (443)
+++||+|||+||..-..-. + ...++ +....|++.++|+.|. +.+.+.|.|......|..+++.
T Consensus 3 ~k~~v~DlDnTlw~gv~~e----~---------g~~~i~~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~ 69 (320)
T TIGR01686 3 LKVLVLDLDNTLWGGVLGE----D---------GIDNLNLSPLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRK 69 (320)
T ss_pred eEEEEEcCCCCCCCCEEcc----C---------CccccccCccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCc
Confidence 6799999999996432111 0 00111 1224789999999998 6699999999999999999998
Q ss_pred --hCCCCCeeeEEEEcccceeeCCceeecccccCCCCCcEEEEECChhhh
Q 013428 346 --LDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVF 393 (443)
Q Consensus 346 --LDP~g~~f~~RL~Re~C~~~~g~yiKDLs~LgrDl~kVIIIDDsp~s~ 393 (443)
+.... +|...... ..-....+.+-+..+|.+++.+|+|||++.-.
T Consensus 70 ~~~~~~~-~f~~~~~~--~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~ 116 (320)
T TIGR01686 70 DFILQAE-DFDARSIN--WGPKSESLRKIAKKLNLGTDSFLFIDDNPAER 116 (320)
T ss_pred cccCcHH-HeeEEEEe--cCchHHHHHHHHHHhCCCcCcEEEECCCHHHH
Confidence 55543 55543221 01112345566677899999999999999755
No 31
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=97.75 E-value=2.1e-05 Score=77.68 Aligned_cols=128 Identities=12% Similarity=0.087 Sum_probs=92.6
Q ss_pred CCceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhh-ccEEEEEcCCcHHHHHHHHHHh
Q 013428 268 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDIL 346 (443)
Q Consensus 268 ~kk~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Lsk-~YEIVIfTAs~~~YAd~VLd~L 346 (443)
.++..+++|+||||....... ..++. ........|++.++|+++.+ .+.++|.|+....++..+++.|
T Consensus 156 ~~~~~~~~D~dgtl~~~~~~~--~~~~~---------~~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l 224 (300)
T PHA02530 156 GLPKAVIFDIDGTLAKMGGRS--PYDWT---------KVKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWL 224 (300)
T ss_pred CCCCEEEEECCCcCcCCCCCC--ccchh---------hcccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHH
Confidence 445799999999998754221 11111 01124568999999999985 5999999999999999999999
Q ss_pred CCCCCeeeEEEEccc-------ceeeC---CceeecccccCC-CCCcEEEEECChhhhccCCCceeeeccc
Q 013428 347 DPDGKLISRRVYRES-------CIFSD---GTYTKDLTVLGV-DLAKVAIIDNSPQVFRLQVNNGIPIESW 406 (443)
Q Consensus 347 DP~g~~f~~RL~Re~-------C~~~~---g~yiKDLs~Lgr-Dl~kVIIIDDsp~s~~~q~~NgIpI~s~ 406 (443)
+..+.+|+..+..+. ..... ..+.+.|..++. +.+.++.|+|++........+||++...
T Consensus 225 ~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v 295 (300)
T PHA02530 225 RQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECWQV 295 (300)
T ss_pred HHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEEEe
Confidence 998767776665552 11111 133455666777 6799999999999998888889886544
No 32
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=97.58 E-value=8.1e-05 Score=73.04 Aligned_cols=132 Identities=12% Similarity=0.093 Sum_probs=78.3
Q ss_pred CCCceEEEEecCcccccccccc-cCCCCceE---EEEecceec-------eEEEeeCchHHHHHHHhh-hccEEEEEcCC
Q 013428 267 GRKSVTLVLDLDETLVHSTLEY-CDDADFTF---TVFFNMKEH-------TVYVKQRPHLKTFLERVA-EMFEVVIFTAS 334 (443)
Q Consensus 267 ~~kk~tLVLDLDeTLVhS~~~~-~~~~df~~---~i~~~~~~~-------~~~V~~RPgL~eFLe~Ls-k~YEIVIfTAs 334 (443)
.++|+.++|||||||++++--- .....+.. ...++.... .-.....|++.+||+++. +.+.++|-|+.
T Consensus 60 ~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~~G~~i~iVTnr 139 (237)
T TIGR01672 60 GRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIFFVTGR 139 (237)
T ss_pred CCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHHCCCEEEEEeCC
Confidence 4556799999999999997410 00000100 000000000 112344445999999998 46999999998
Q ss_pred ----cHHHHHHHHHHhCCCCCeeeEEEEcccceeeCCceeecccccCCCCCcEEEEECChhhhccCCCceeee
Q 013428 335 ----QSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPI 403 (443)
Q Consensus 335 ----~~~YAd~VLd~LDP~g~~f~~RL~Re~C~~~~g~yiKDLs~LgrDl~kVIIIDDsp~s~~~q~~NgIpI 403 (443)
...+++.+++.+.... +|...+..+..... .+-|. ..+ .....+|.|-|+..-+......|+..
T Consensus 140 ~~~k~~~~a~~ll~~lGi~~-~f~~i~~~d~~~~~--Kp~~~-~~l-~~~~i~i~vGDs~~DI~aAk~AGi~~ 207 (237)
T TIGR01672 140 TPGKTDTVSKTLAKNFHIPA-MNPVIFAGDKPGQY--QYTKT-QWI-QDKNIRIHYGDSDNDITAAKEAGARG 207 (237)
T ss_pred CCCcCHHHHHHHHHHhCCch-heeEEECCCCCCCC--CCCHH-HHH-HhCCCeEEEeCCHHHHHHHHHCCCCE
Confidence 6779999999998865 67655554442211 11121 112 12333789999988776655666653
No 33
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=97.52 E-value=9.1e-05 Score=64.99 Aligned_cols=95 Identities=18% Similarity=0.310 Sum_probs=77.9
Q ss_pred EEEeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEcccceeeC---CceeecccccCCCCCc
Q 013428 307 VYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAK 382 (443)
Q Consensus 307 ~~V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~C~~~~---g~yiKDLs~LgrDl~k 382 (443)
......||+.++|+.++ +.+.++|.|.+...++..+++.+... .+|+..++.++....+ ..|.+-+..+|.++++
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~-~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~ 152 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLD-DYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEE 152 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHG-GGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGG
T ss_pred hccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccc-cccccccccchhhhhhhHHHHHHHHHHHcCCCcce
Confidence 35889999999999999 88999999999999999999999777 4899888877655432 3566777788999999
Q ss_pred EEEEECChhhhccCCCceee
Q 013428 383 VAIIDNSPQVFRLQVNNGIP 402 (443)
Q Consensus 383 VIIIDDsp~s~~~q~~NgIp 402 (443)
+++|||++.........|+.
T Consensus 153 ~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 153 ILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp EEEEESSHHHHHHHHHTTSE
T ss_pred EEEEeCCHHHHHHHHHcCCe
Confidence 99999999766554444544
No 34
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=97.50 E-value=0.0002 Score=66.18 Aligned_cols=107 Identities=18% Similarity=0.258 Sum_probs=68.3
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh-hccEEEEEcCCcHH-----------
Q 013428 270 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSI----------- 337 (443)
Q Consensus 270 k~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~----------- 337 (443)
+++++||+||||+-..... .| ......| ...-||+.+.|++|. +.|.++|.|+....
T Consensus 13 ~k~~~~D~Dgtl~~~~~~~----~~------~~~~~~~-~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~ 81 (166)
T TIGR01664 13 SKVAAFDLDGTLITTRSGK----VF------PTSASDW-RFLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFK 81 (166)
T ss_pred CcEEEEeCCCceEecCCCC----cc------cCChHHe-EEecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHH
Confidence 3588999999998643110 00 0001111 224599999999997 67999999997763
Q ss_pred -HHHHHHHHhCCCCCeeeEEEEcccceee---CCceeecccccC--CCCCcEEEEECCh
Q 013428 338 -YAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLG--VDLAKVAIIDNSP 390 (443)
Q Consensus 338 -YAd~VLd~LDP~g~~f~~RL~Re~C~~~---~g~yiKDLs~Lg--rDl~kVIIIDDsp 390 (443)
++..+++.++.. +...+..+..... .+.+..-+..+| .+++++++|.|++
T Consensus 82 ~~i~~~l~~~gl~---~~~ii~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~ 137 (166)
T TIGR01664 82 NKIEAFLEKLKVP---IQVLAATHAGLYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAA 137 (166)
T ss_pred HHHHHHHHHcCCC---EEEEEecCCCCCCCCccHHHHHHHHHcCCCCCchhcEEEECCC
Confidence 567778887763 2233333222111 224445566777 8899999999986
No 35
>PRK06769 hypothetical protein; Validated
Probab=97.38 E-value=0.00022 Score=65.98 Aligned_cols=116 Identities=17% Similarity=0.183 Sum_probs=72.3
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh-hccEEEEEcCCcHHH-----HHHHHH
Q 013428 271 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIY-----AAQLLD 344 (443)
Q Consensus 271 ~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~Y-----Ad~VLd 344 (443)
..|+||+||||.- |.. + ...-.+..-||+.++|++|. +.|.++|.|++.... ...+..
T Consensus 5 ~~~~~d~d~~~~~--~~~-----~---------~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~ 68 (173)
T PRK06769 5 QAIFIDRDGTIGG--DTT-----I---------HYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQ 68 (173)
T ss_pred cEEEEeCCCcccC--CCC-----C---------CCHHHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHH
Confidence 4789999999941 110 0 00012456799999999998 469999999876421 112333
Q ss_pred HhCCCCCeeeEEEE-----ccccee---eCCceeecccccCCCCCcEEEEECChhhhccCCCceeeec
Q 013428 345 ILDPDGKLISRRVY-----RESCIF---SDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIE 404 (443)
Q Consensus 345 ~LDP~g~~f~~RL~-----Re~C~~---~~g~yiKDLs~LgrDl~kVIIIDDsp~s~~~q~~NgIpI~ 404 (443)
.+...| |...+. .+.... ..+.|.+-++++|.+++++++|+|++.-.......|+...
T Consensus 69 ~l~~~g--~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i 134 (173)
T PRK06769 69 ELKGFG--FDDIYLCPHKHGDGCECRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTI 134 (173)
T ss_pred HHHhCC--cCEEEECcCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEE
Confidence 333333 333332 111111 1236677888899999999999999976665555665544
No 36
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=97.38 E-value=0.00097 Score=67.20 Aligned_cols=72 Identities=19% Similarity=0.274 Sum_probs=58.6
Q ss_pred CCceEEEEecCcccccccccccCCCCceEEEEecceeceEEEee-CchHHHHHHHhhhc-cEEEEEcCCcHHHHHHHHHH
Q 013428 268 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQ-RPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDI 345 (443)
Q Consensus 268 ~kk~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~-RPgL~eFLe~Lsk~-YEIVIfTAs~~~YAd~VLd~ 345 (443)
.++-.+|+|||.|||-.... +.+ =|.+-+.|..+++. .-+++||.|.++++..-++.
T Consensus 120 ~~phVIVfDlD~TLItd~~~---------------------v~Ir~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~ 178 (297)
T PF05152_consen 120 EPPHVIVFDLDSTLITDEGD---------------------VRIRDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKE 178 (297)
T ss_pred CCCcEEEEECCCcccccCCc---------------------cccCChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHH
Confidence 34559999999999976422 222 37889999999966 59999999999999999999
Q ss_pred hCCCCCeeeEEEEccc
Q 013428 346 LDPDGKLISRRVYRES 361 (443)
Q Consensus 346 LDP~g~~f~~RL~Re~ 361 (443)
++..+ +|+..|.+..
T Consensus 179 ~~L~~-~Fd~ii~~G~ 193 (297)
T PF05152_consen 179 LKLEG-YFDIIICGGN 193 (297)
T ss_pred hCCcc-ccEEEEeCCc
Confidence 99885 8998888553
No 37
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=97.36 E-value=0.00019 Score=65.00 Aligned_cols=87 Identities=11% Similarity=0.191 Sum_probs=60.4
Q ss_pred EeeCchHHHHHHHhhh-ccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEcccceeeCC-----------------cee
Q 013428 309 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG-----------------TYT 370 (443)
Q Consensus 309 V~~RPgL~eFLe~Lsk-~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~C~~~~g-----------------~yi 370 (443)
+.++||+.++|+.+.+ .+.++|.|++...+++.+++.++... +|...+..+......| ...
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~ 149 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKD-VFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCC 149 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChh-heeEEeccCceECCCCcEEEecCCCCccCcCCCCCC
Confidence 6899999999999985 59999999999999999999987654 6766664322111111 111
Q ss_pred e--cccccCCC-CCcEEEEECChhhhccC
Q 013428 371 K--DLTVLGVD-LAKVAIIDNSPQVFRLQ 396 (443)
Q Consensus 371 K--DLs~LgrD-l~kVIIIDDsp~s~~~q 396 (443)
| -+..+... .+++|+|+|+..-+...
T Consensus 150 K~~~~~~~~~~~~~~~i~iGD~~~D~~aa 178 (188)
T TIGR01489 150 KGKVIHKLSEPKYQHIIYIGDGVTDVCPA 178 (188)
T ss_pred HHHHHHHHHhhcCceEEEECCCcchhchH
Confidence 2 22233334 78899999998765443
No 38
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=97.35 E-value=0.00034 Score=64.49 Aligned_cols=109 Identities=17% Similarity=0.139 Sum_probs=75.9
Q ss_pred CCceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhhc-cEEEEEcCCc-HHHHHHHHHH
Q 013428 268 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEM-FEVVIFTASQ-SIYAAQLLDI 345 (443)
Q Consensus 268 ~kk~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Lsk~-YEIVIfTAs~-~~YAd~VLd~ 345 (443)
.+-..||+|+||||..... ...-|++.++|++|.+. +.++|.|++. ...+..+++.
T Consensus 23 ~~v~~vv~D~Dgtl~~~~~----------------------~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~ 80 (170)
T TIGR01668 23 VGIKGVVLDKDNTLVYPDH----------------------NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKA 80 (170)
T ss_pred CCCCEEEEecCCccccCCC----------------------CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHH
Confidence 4456899999999985421 23469999999999854 9999999998 6888888777
Q ss_pred hCCCCCeeeEEEEcccceeeCCceeecccccCCCCCcEEEEECChh-hhccCCCceeeecc
Q 013428 346 LDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQ-VFRLQVNNGIPIES 405 (443)
Q Consensus 346 LDP~g~~f~~RL~Re~C~~~~g~yiKDLs~LgrDl~kVIIIDDsp~-s~~~q~~NgIpI~s 405 (443)
++... ++ .........|.+-+..+|.+.+++++|+|+.. -......+|+...-
T Consensus 81 ~gl~~------~~-~~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~ 134 (170)
T TIGR01668 81 LGIPV------LP-HAVKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTIL 134 (170)
T ss_pred cCCEE------Ec-CCCCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEE
Confidence 65421 11 11111233556667788999999999999983 45444455655443
No 39
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=97.34 E-value=5.4e-05 Score=70.20 Aligned_cols=94 Identities=18% Similarity=0.164 Sum_probs=62.5
Q ss_pred EeeCchHHHHHHHhhhccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEc-ccceee-----CC-ceeecccccCCCCC
Q 013428 309 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYR-ESCIFS-----DG-TYTKDLTVLGVDLA 381 (443)
Q Consensus 309 V~~RPgL~eFLe~Lsk~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~R-e~C~~~-----~g-~yiKDLs~LgrDl~ 381 (443)
+..+||+.+||+.+.+.+.++|.|++...+++.+++.++... +|..++.- +.-... .+ ....-+..++....
T Consensus 67 ~~~~pg~~e~L~~L~~~~~~~IvS~~~~~~~~~~l~~~gl~~-~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~~~~ 145 (205)
T PRK13582 67 LDPLPGAVEFLDWLRERFQVVILSDTFYEFAGPLMRQLGWPT-LFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKSLGY 145 (205)
T ss_pred CCCCCCHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHcCCch-hhcceEEECCCCeEECccccccchHHHHHHHHHHhCC
Confidence 567899999999999669999999999999999999988654 56554422 111000 01 11111223444557
Q ss_pred cEEEEECChhhhccCCCceeee
Q 013428 382 KVAIIDNSPQVFRLQVNNGIPI 403 (443)
Q Consensus 382 kVIIIDDsp~s~~~q~~NgIpI 403 (443)
+++.|-|+..-.......|+.+
T Consensus 146 ~~v~iGDs~~D~~~~~aa~~~v 167 (205)
T PRK13582 146 RVIAAGDSYNDTTMLGEADAGI 167 (205)
T ss_pred eEEEEeCCHHHHHHHHhCCCCE
Confidence 8999999998654444444444
No 40
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=97.33 E-value=0.00021 Score=64.32 Aligned_cols=92 Identities=20% Similarity=0.254 Sum_probs=71.5
Q ss_pred EeeCchHHHHHHHhhh-ccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEcccceeeC---CceeecccccCCCCCcEE
Q 013428 309 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 384 (443)
Q Consensus 309 V~~RPgL~eFLe~Lsk-~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~C~~~~---g~yiKDLs~LgrDl~kVI 384 (443)
+..+||+.+||+++++ .|.++|.|++...+ ..++..++..+ +|...++.+.....+ ..|.+-+..+|.++++++
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~-~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 161 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRD-LFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECL 161 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHH-HCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEE
Confidence 5778999999999985 69999999999998 76666677665 788888765544332 356666778899999999
Q ss_pred EEECChhhhccCCCceee
Q 013428 385 IIDNSPQVFRLQVNNGIP 402 (443)
Q Consensus 385 IIDDsp~s~~~q~~NgIp 402 (443)
+|+|++.........|+.
T Consensus 162 ~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 162 FVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred EEcCCHHHHHHHHHcCCE
Confidence 999999766555555554
No 41
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=97.29 E-value=0.00024 Score=66.48 Aligned_cols=96 Identities=16% Similarity=0.212 Sum_probs=76.3
Q ss_pred EEeeCchHHHHHHHhhhc-cEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEcccceeeC---CceeecccccCCCCCcE
Q 013428 308 YVKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKV 383 (443)
Q Consensus 308 ~V~~RPgL~eFLe~Lsk~-YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~C~~~~---g~yiKDLs~LgrDl~kV 383 (443)
++.+.||+.+||++|.+. +.++|.|++...++...++.++... +|+.++..+.....+ ..|.+-++++|.+.+++
T Consensus 92 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~ 170 (221)
T TIGR02253 92 YLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRD-FFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEA 170 (221)
T ss_pred hCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHH-hccEEEEeccCCCCCCCHHHHHHHHHHcCCChhhE
Confidence 367899999999999865 9999999999999999999998765 888888776654332 35677788899999999
Q ss_pred EEEECCh-hhhccCCCceeeec
Q 013428 384 AIIDNSP-QVFRLQVNNGIPIE 404 (443)
Q Consensus 384 IIIDDsp-~s~~~q~~NgIpI~ 404 (443)
|+|.|++ .-+......|+...
T Consensus 171 ~~igDs~~~di~~A~~aG~~~i 192 (221)
T TIGR02253 171 VMVGDRLDKDIKGAKNLGMKTV 192 (221)
T ss_pred EEECCChHHHHHHHHHCCCEEE
Confidence 9999998 45545445555543
No 42
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=97.28 E-value=0.00029 Score=69.62 Aligned_cols=98 Identities=11% Similarity=0.177 Sum_probs=81.7
Q ss_pred EeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEcccceeeC---CceeecccccCCCCCcEE
Q 013428 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 384 (443)
Q Consensus 309 V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~C~~~~---g~yiKDLs~LgrDl~kVI 384 (443)
+...||+.++|++|. ..|.++|.|++...++..+++.++..+ ||+..+..+.+...+ ..|.+-+.++|.++++++
T Consensus 108 ~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~-~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~l 186 (260)
T PLN03243 108 YRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEG-FFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCI 186 (260)
T ss_pred cccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHh-hCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHeE
Confidence 567899999999998 559999999999999999999998765 899998887765332 357788889999999999
Q ss_pred EEECChhhhccCCCceeeecccc
Q 013428 385 IIDNSPQVFRLQVNNGIPIESWF 407 (443)
Q Consensus 385 IIDDsp~s~~~q~~NgIpI~s~~ 407 (443)
+|+|++.-+......|+......
T Consensus 187 ~IgDs~~Di~aA~~aG~~~i~v~ 209 (260)
T PLN03243 187 VFGNSNSSVEAAHDGCMKCVAVA 209 (260)
T ss_pred EEcCCHHHHHHHHHcCCEEEEEe
Confidence 99999988877777777665443
No 43
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=97.25 E-value=0.00038 Score=67.58 Aligned_cols=97 Identities=16% Similarity=0.255 Sum_probs=81.2
Q ss_pred EeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEcccceeeC---CceeecccccCCCCCcEE
Q 013428 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 384 (443)
Q Consensus 309 V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~C~~~~---g~yiKDLs~LgrDl~kVI 384 (443)
+...||+.++|++|. +.+.++|-|++.+.++..+++.++... ||+..+..+.+...+ ..|.+-+.++|.++++++
T Consensus 107 ~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~-~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~l 185 (248)
T PLN02770 107 LKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSD-FFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTF 185 (248)
T ss_pred CCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChh-hCcEEEecCcCCCCCCChHHHHHHHHHhCCChhHEE
Confidence 667899999999997 569999999999999999999998775 899888877654332 357788889999999999
Q ss_pred EEECChhhhccCCCceeeeccc
Q 013428 385 IIDNSPQVFRLQVNNGIPIESW 406 (443)
Q Consensus 385 IIDDsp~s~~~q~~NgIpI~s~ 406 (443)
+|+|++.-......+|++....
T Consensus 186 ~vgDs~~Di~aA~~aGi~~i~v 207 (248)
T PLN02770 186 VFEDSVSGIKAGVAAGMPVVGL 207 (248)
T ss_pred EEcCCHHHHHHHHHCCCEEEEE
Confidence 9999998777766778776544
No 44
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=97.24 E-value=0.00063 Score=70.55 Aligned_cols=121 Identities=18% Similarity=0.208 Sum_probs=81.4
Q ss_pred CceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhh-ccEEEEEcCC-------------
Q 013428 269 KSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTAS------------- 334 (443)
Q Consensus 269 kk~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Lsk-~YEIVIfTAs------------- 334 (443)
+++.|+||-||||+...... |. ......+...||+.++|++|.+ .|.++|.|+.
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~-----y~-------~~~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l 68 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTD-----FQ-------VDSLDKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDF 68 (354)
T ss_pred CCcEEEEeCCCCccCCCCcc-----cc-------ccCcccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHH
Confidence 46799999999999864211 10 1112237889999999999985 6999999995
Q ss_pred --cHHHHHHHHHHhCCCCCeeeEEEEc-----ccceeeC---CceeecccccCCCCCcEEEEECChhhhccCCCceeeec
Q 013428 335 --QSIYAAQLLDILDPDGKLISRRVYR-----ESCIFSD---GTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIE 404 (443)
Q Consensus 335 --~~~YAd~VLd~LDP~g~~f~~RL~R-----e~C~~~~---g~yiKDLs~LgrDl~kVIIIDDsp~s~~~q~~NgIpI~ 404 (443)
...++..+++.+.. +|...++. +.|.... +.+..-+..++.+++++++|-|+..-......+|+...
T Consensus 69 ~~~~~~i~~iL~~~gl---~fd~i~i~~~~~sd~~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 69 DPPHNLMMQIFESQGI---KFDEVLICPHFPEDNCSCRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred hhHHHHHHHHHHHcCC---ceeeEEEeCCcCcccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 24456666666554 36555554 3443322 12333345568899999999999977766666777644
No 45
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=97.19 E-value=0.00022 Score=65.42 Aligned_cols=92 Identities=23% Similarity=0.285 Sum_probs=73.8
Q ss_pred EeeCchHHHHHHHhhhccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEccccee-------eCCceeecccccCCCCC
Q 013428 309 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIF-------SDGTYTKDLTVLGVDLA 381 (443)
Q Consensus 309 V~~RPgL~eFLe~Lsk~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~C~~-------~~g~yiKDLs~LgrDl~ 381 (443)
+...||+.++|++|+ +.++|.|++...++..+++.++..+ +|+..+..+.... ....|.+-+.++|.+++
T Consensus 83 ~~~~~g~~~~L~~L~--~~~~i~Tn~~~~~~~~~l~~~gl~~-~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~ 159 (184)
T TIGR01993 83 LKPDPELRNLLLRLP--GRKIIFTNGDRAHARRALNRLGIED-CFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDPE 159 (184)
T ss_pred CCCCHHHHHHHHhCC--CCEEEEeCCCHHHHHHHHHHcCcHh-hhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCcc
Confidence 446799999999998 6899999999999999999998764 8888887655332 22356777788999999
Q ss_pred cEEEEECChhhhccCCCceeee
Q 013428 382 KVAIIDNSPQVFRLQVNNGIPI 403 (443)
Q Consensus 382 kVIIIDDsp~s~~~q~~NgIpI 403 (443)
++++|+|++.........|+..
T Consensus 160 ~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 160 RAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred ceEEEeCCHHHHHHHHHcCCEE
Confidence 9999999997766666666653
No 46
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=97.19 E-value=0.0011 Score=65.26 Aligned_cols=131 Identities=11% Similarity=0.092 Sum_probs=76.0
Q ss_pred CCCceEEEEecCcccccccccc-cCCCCceEEE--Eecc--------eeceEEEeeCchHHHHHHHhh-hccEEEEEcC-
Q 013428 267 GRKSVTLVLDLDETLVHSTLEY-CDDADFTFTV--FFNM--------KEHTVYVKQRPHLKTFLERVA-EMFEVVIFTA- 333 (443)
Q Consensus 267 ~~kk~tLVLDLDeTLVhS~~~~-~~~~df~~~i--~~~~--------~~~~~~V~~RPgL~eFLe~Ls-k~YEIVIfTA- 333 (443)
.++|+.++||+|||+++++... .....|.-.. .+.. .....+....||+.+||+++. +.++|++-|+
T Consensus 60 ~~~p~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR 139 (237)
T PRK11009 60 GRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHVKRGDSIYFITGR 139 (237)
T ss_pred CCCCcEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHHHCCCeEEEEeCC
Confidence 4567799999999999965211 1111110000 0000 001234556666999999995 7799999998
Q ss_pred ---CcHHHHHHHHHHhCC-CCCeeeEEEEcccceeeCCceeecccccCCCCCcEEEEECChhhhccCCCceeee
Q 013428 334 ---SQSIYAAQLLDILDP-DGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPI 403 (443)
Q Consensus 334 ---s~~~YAd~VLd~LDP-~g~~f~~RL~Re~C~~~~g~yiKDLs~LgrDl~kVIIIDDsp~s~~~q~~NgIpI 403 (443)
....+++.+++.+.. ...+|...+..+.. .... |. ..+. ...-+|+|-|+..-+......|+..
T Consensus 140 ~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~-~K~~---K~-~~l~-~~~i~I~IGDs~~Di~aA~~AGi~~ 207 (237)
T PRK11009 140 TATKTETVSKTLADDFHIPADNMNPVIFAGDKP-GQYT---KT-QWLK-KKNIRIFYGDSDNDITAAREAGARG 207 (237)
T ss_pred CCcccHHHHHHHHHHcCCCcccceeEEEcCCCC-CCCC---HH-HHHH-hcCCeEEEcCCHHHHHHHHHcCCcE
Confidence 456799999987776 23366555544431 1111 11 0111 2333899999987775555555553
No 47
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=97.19 E-value=0.00045 Score=64.40 Aligned_cols=96 Identities=15% Similarity=0.134 Sum_probs=78.4
Q ss_pred EeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEcccceee---CCceeecccccCCCCCcEE
Q 013428 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGVDLAKVA 384 (443)
Q Consensus 309 V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~C~~~---~g~yiKDLs~LgrDl~kVI 384 (443)
+...||+.++|++|. +.+.++|.|++...++..+++.++..+ +|+..+..+++... ...|.+-+.++|.+.++++
T Consensus 74 ~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~l 152 (205)
T TIGR01454 74 VEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLP-LFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAV 152 (205)
T ss_pred cccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChh-heeeEEecCcCCCCCCChHHHHHHHHHcCCChhheE
Confidence 677899999999998 569999999999999999999998876 78887776664322 2355666778899999999
Q ss_pred EEECChhhhccCCCceeeecc
Q 013428 385 IIDNSPQVFRLQVNNGIPIES 405 (443)
Q Consensus 385 IIDDsp~s~~~q~~NgIpI~s 405 (443)
+|+|++.-+.....+|++...
T Consensus 153 ~igD~~~Di~aA~~~Gi~~i~ 173 (205)
T TIGR01454 153 MVGDAVTDLASARAAGTATVA 173 (205)
T ss_pred EEcCCHHHHHHHHHcCCeEEE
Confidence 999999877777777877543
No 48
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=97.19 E-value=0.00029 Score=67.25 Aligned_cols=94 Identities=17% Similarity=0.151 Sum_probs=73.9
Q ss_pred EeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEcccceeeCC---ceeecccccCCCCCcEE
Q 013428 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVA 384 (443)
Q Consensus 309 V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~C~~~~g---~yiKDLs~LgrDl~kVI 384 (443)
...-||+.+.|..++ +.|.+.|.|+.....++.+++.++-.. +|..++..+.....+. ....-+..+|.+++++|
T Consensus 88 ~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~-~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l 166 (220)
T COG0546 88 SRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLAD-YFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEAL 166 (220)
T ss_pred CccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcc-ccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheE
Confidence 467899999999999 569999999999999999999999886 8887776333333322 34455677888877999
Q ss_pred EEECChhhhccCCCceeee
Q 013428 385 IIDNSPQVFRLQVNNGIPI 403 (443)
Q Consensus 385 IIDDsp~s~~~q~~NgIpI 403 (443)
+|=|+..-.......|++.
T Consensus 167 ~VGDs~~Di~aA~~Ag~~~ 185 (220)
T COG0546 167 MVGDSLNDILAAKAAGVPA 185 (220)
T ss_pred EECCCHHHHHHHHHcCCCE
Confidence 9999998877766666553
No 49
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=97.17 E-value=0.00022 Score=69.42 Aligned_cols=90 Identities=22% Similarity=0.330 Sum_probs=71.5
Q ss_pred EeeCchHHHHHHHhhhccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEccc---------ceeeCCceeecccccCCC
Q 013428 309 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRES---------CIFSDGTYTKDLTVLGVD 379 (443)
Q Consensus 309 V~~RPgL~eFLe~Lsk~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~---------C~~~~g~yiKDLs~LgrD 379 (443)
++.-|-|++||-.|.+.+ .++||.+.+.-|..+|++|.... .|...++.+- |......|.|-....|.+
T Consensus 99 LkPD~~LRnlLL~l~~r~-k~~FTNa~k~HA~r~Lk~LGieD-cFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi~ 176 (244)
T KOG3109|consen 99 LKPDPVLRNLLLSLKKRR-KWIFTNAYKVHAIRILKKLGIED-CFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGID 176 (244)
T ss_pred cCCCHHHHHHHHhCcccc-EEEecCCcHHHHHHHHHHhChHH-hccceeEeeccCCCCCceeecCCHHHHHHHHHHhCCC
Confidence 677788999999999877 89999999999999999999986 7888877443 222334666777778887
Q ss_pred -CCcEEEEECChhhhccCCCce
Q 013428 380 -LAKVAIIDNSPQVFRLQVNNG 400 (443)
Q Consensus 380 -l~kVIIIDDsp~s~~~q~~Ng 400 (443)
++|++++||+.........=|
T Consensus 177 ~p~~t~FfDDS~~NI~~ak~vG 198 (244)
T KOG3109|consen 177 SPRNTYFFDDSERNIQTAKEVG 198 (244)
T ss_pred CcCceEEEcCchhhHHHHHhcc
Confidence 999999999998775544333
No 50
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=97.17 E-value=0.00036 Score=65.06 Aligned_cols=94 Identities=14% Similarity=0.099 Sum_probs=76.1
Q ss_pred EeeCchHHHHHHHhhhccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEcccceeeC---Cceeeccccc-CCCCCcEE
Q 013428 309 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVL-GVDLAKVA 384 (443)
Q Consensus 309 V~~RPgL~eFLe~Lsk~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~C~~~~---g~yiKDLs~L-grDl~kVI 384 (443)
+..+||+.++|+++++.+.++|-|++...++..+++.+.-.+ +|+..+..+.....+ ..|.+-+.++ |.+++++|
T Consensus 96 ~~~~~g~~~~L~~l~~~~~~~i~Sn~~~~~~~~~l~~~~l~~-~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v 174 (224)
T TIGR02254 96 HQLLPGAFELMENLQQKFRLYIVTNGVRETQYKRLRKSGLFP-FFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEEVL 174 (224)
T ss_pred CeeCccHHHHHHHHHhcCcEEEEeCCchHHHHHHHHHCCcHh-hcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchheE
Confidence 578999999999999779999999999999999999988776 898888876655332 3567778889 99999999
Q ss_pred EEECCh-hhhccCCCceeee
Q 013428 385 IIDNSP-QVFRLQVNNGIPI 403 (443)
Q Consensus 385 IIDDsp-~s~~~q~~NgIpI 403 (443)
+|+|++ .-+.....+|++.
T Consensus 175 ~igD~~~~di~~A~~~G~~~ 194 (224)
T TIGR02254 175 MIGDSLTADIKGGQNAGLDT 194 (224)
T ss_pred EECCCcHHHHHHHHHCCCcE
Confidence 999997 4555555566544
No 51
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.15 E-value=0.00043 Score=64.29 Aligned_cols=97 Identities=15% Similarity=0.128 Sum_probs=77.3
Q ss_pred EeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEcccceeeC---CceeecccccCCCCCcEE
Q 013428 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 384 (443)
Q Consensus 309 V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~C~~~~---g~yiKDLs~LgrDl~kVI 384 (443)
+..+||+.++|+.+. +.+.++|.|++...++..+++.++-.+ +|...+..+.....+ ..|.+-++.+|.++++++
T Consensus 84 ~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~ 162 (213)
T TIGR01449 84 TSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAK-YFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQMV 162 (213)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHh-hCcEEEecCCCCCCCCChHHHHHHHHHcCCChhHeE
Confidence 678999999999998 559999999999999999999998765 787776665433222 246677888999999999
Q ss_pred EEECChhhhccCCCceeeeccc
Q 013428 385 IIDNSPQVFRLQVNNGIPIESW 406 (443)
Q Consensus 385 IIDDsp~s~~~q~~NgIpI~s~ 406 (443)
+|+|++.-+......|++....
T Consensus 163 ~igDs~~d~~aa~~aG~~~i~v 184 (213)
T TIGR01449 163 YVGDSRVDIQAARAAGCPSVLL 184 (213)
T ss_pred EeCCCHHHHHHHHHCCCeEEEE
Confidence 9999998776666677665433
No 52
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=97.14 E-value=0.00045 Score=63.94 Aligned_cols=94 Identities=15% Similarity=0.191 Sum_probs=75.6
Q ss_pred EeeCchHHHHHHHhhhc-cEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEcccceee---CCceeecccccCCCCCcEE
Q 013428 309 VKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGVDLAKVA 384 (443)
Q Consensus 309 V~~RPgL~eFLe~Lsk~-YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~C~~~---~g~yiKDLs~LgrDl~kVI 384 (443)
+...||+.++|++|++. |.++|.|++...++..+++.+.-.. +|+..+..++.... ...|.+-++.+|.++++++
T Consensus 91 ~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~-~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~ 169 (198)
T TIGR01428 91 LPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDD-PFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVL 169 (198)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChh-hhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEE
Confidence 55789999999999975 9999999999999999999987654 78888887665432 2356677778899999999
Q ss_pred EEECChhhhccCCCceeee
Q 013428 385 IIDNSPQVFRLQVNNGIPI 403 (443)
Q Consensus 385 IIDDsp~s~~~q~~NgIpI 403 (443)
+|+|++.-+......|+..
T Consensus 170 ~vgD~~~Di~~A~~~G~~~ 188 (198)
T TIGR01428 170 FVASNPWDLGGAKKFGFKT 188 (198)
T ss_pred EEeCCHHHHHHHHHCCCcE
Confidence 9999997665555666653
No 53
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=97.03 E-value=0.00083 Score=60.98 Aligned_cols=112 Identities=19% Similarity=0.147 Sum_probs=74.7
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHHhCCC
Q 013428 271 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 349 (443)
Q Consensus 271 ~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~LDP~ 349 (443)
+.++||+||||+.-.... ..++ ...-++.++|+. -|++|. +.+.++|.|+.....+..+++.+...
T Consensus 2 ~~~~~D~Dgtl~~~~~~~----------~~~~-~~~~~~~~~~~~--~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~ 68 (154)
T TIGR01670 2 RLLILDVDGVLTDGKIYY----------TNNG-EEIKAFNVRDGY--GIRCALKSGIEVAIITGRKAKLVEDRCKTLGIT 68 (154)
T ss_pred eEEEEeCceeEEcCeEEE----------CCCC-cEEEEEechhHH--HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCC
Confidence 478999999998532100 0111 112234677776 688888 46999999999999999999998866
Q ss_pred CCeeeEEEEcccceeeCCceeecccccCCCCCcEEEEECChhhhccCCCceee
Q 013428 350 GKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIP 402 (443)
Q Consensus 350 g~~f~~RL~Re~C~~~~g~yiKDLs~LgrDl~kVIIIDDsp~s~~~q~~NgIp 402 (443)
. +|... ......+.+-+..+|.++++++.|-|+..-...-...|+.
T Consensus 69 ~-~~~~~------~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~ 114 (154)
T TIGR01670 69 H-LYQGQ------SNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLS 114 (154)
T ss_pred E-EEecc------cchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCe
Confidence 4 55421 1111233344567788999999999998766554445554
No 54
>PLN02954 phosphoserine phosphatase
Probab=97.03 E-value=0.00036 Score=65.70 Aligned_cols=92 Identities=9% Similarity=0.125 Sum_probs=61.1
Q ss_pred EeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHHhCCCC-CeeeEEEEccc-------------cee-eCCcee-e
Q 013428 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDG-KLISRRVYRES-------------CIF-SDGTYT-K 371 (443)
Q Consensus 309 V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~LDP~g-~~f~~RL~Re~-------------C~~-~~g~yi-K 371 (443)
..++||+.++|+++. +.+.++|-|++.+.+++.+++.++... .+|..++.-+. |.. .+...+ +
T Consensus 83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~~ 162 (224)
T PLN02954 83 PRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQH 162 (224)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHHH
Confidence 457899999999998 458999999999999999999987652 36655433211 000 000111 1
Q ss_pred cccccCCCCCcEEEEECChhhhccCCCceee
Q 013428 372 DLTVLGVDLAKVAIIDNSPQVFRLQVNNGIP 402 (443)
Q Consensus 372 DLs~LgrDl~kVIIIDDsp~s~~~q~~NgIp 402 (443)
-+..+| .+++|+|-|++.-......+|+.
T Consensus 163 ~~~~~~--~~~~i~iGDs~~Di~aa~~~~~~ 191 (224)
T PLN02954 163 IKKKHG--YKTMVMIGDGATDLEARKPGGAD 191 (224)
T ss_pred HHHHcC--CCceEEEeCCHHHHHhhhcCCCC
Confidence 112234 36899999999877665544444
No 55
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=96.98 E-value=0.00084 Score=63.45 Aligned_cols=100 Identities=14% Similarity=0.081 Sum_probs=81.3
Q ss_pred EeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEcccceeeC---CceeecccccCCCCCcEE
Q 013428 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 384 (443)
Q Consensus 309 V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~C~~~~---g~yiKDLs~LgrDl~kVI 384 (443)
....||+.++|++++ +.|.++|.|++...+++.+++.+...+ +|+..+.++.....+ ..|..-+..+|.++++++
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 169 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRD-YFDALASAEKLPYSKPHPEVYLNCAAKLGVDPLTCV 169 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchh-cccEEEEcccCCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence 567899999999998 569999999999999999999988765 788888776543322 256677788899999999
Q ss_pred EEECChhhhccCCCceeeeccccCC
Q 013428 385 IIDNSPQVFRLQVNNGIPIESWFDD 409 (443)
Q Consensus 385 IIDDsp~s~~~q~~NgIpI~s~~gd 409 (443)
+|+|++.-+......|++..-+...
T Consensus 170 ~igDs~~Di~aA~~aG~~~i~v~~~ 194 (222)
T PRK10826 170 ALEDSFNGMIAAKAARMRSIVVPAP 194 (222)
T ss_pred EEcCChhhHHHHHHcCCEEEEecCC
Confidence 9999998887777788876555443
No 56
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=96.98 E-value=0.00061 Score=63.53 Aligned_cols=101 Identities=13% Similarity=0.157 Sum_probs=77.1
Q ss_pred EEeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEcccceeeC---CceeecccccCCCCCcE
Q 013428 308 YVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKV 383 (443)
Q Consensus 308 ~V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~C~~~~---g~yiKDLs~LgrDl~kV 383 (443)
+...+||+.++|+.++ +.|.++|.|++.......++.....-..+|+..++.+++...+ ..|..-++.+|.+++++
T Consensus 82 ~~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~ 161 (199)
T PRK09456 82 FVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADA 161 (199)
T ss_pred HhccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHe
Confidence 3567999999999998 5699999999998877665544222234788888776655442 35677788999999999
Q ss_pred EEEECChhhhccCCCceeeeccccC
Q 013428 384 AIIDNSPQVFRLQVNNGIPIESWFD 408 (443)
Q Consensus 384 IIIDDsp~s~~~q~~NgIpI~s~~g 408 (443)
++|||++.........|+...-+.+
T Consensus 162 l~vgD~~~di~aA~~aG~~~i~~~~ 186 (199)
T PRK09456 162 VFFDDNADNIEAANALGITSILVTD 186 (199)
T ss_pred EEeCCCHHHHHHHHHcCCEEEEecC
Confidence 9999999887777778888765544
No 57
>PRK09449 dUMP phosphatase; Provisional
Probab=96.94 E-value=0.00082 Score=63.29 Aligned_cols=93 Identities=15% Similarity=0.153 Sum_probs=73.7
Q ss_pred EeeCchHHHHHHHhhhccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEcccceeeC---CceeecccccCC-CCCcEE
Q 013428 309 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGV-DLAKVA 384 (443)
Q Consensus 309 V~~RPgL~eFLe~Lsk~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~C~~~~---g~yiKDLs~Lgr-Dl~kVI 384 (443)
+...||+.++|++|.+.|.++|.|++...++..+++.++..+ +|+..+..+++...+ ..|.+-++.+|. +.++++
T Consensus 94 ~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~~~l~~-~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~ 172 (224)
T PRK09449 94 CTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLERTGLRD-YFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSRVL 172 (224)
T ss_pred CccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHhCChHH-HcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcccEE
Confidence 567899999999999889999999999999999999988775 798888877654332 356777888886 457899
Q ss_pred EEECChh-hhccCCCceee
Q 013428 385 IIDNSPQ-VFRLQVNNGIP 402 (443)
Q Consensus 385 IIDDsp~-s~~~q~~NgIp 402 (443)
+|+|++. -.......|+.
T Consensus 173 ~vgD~~~~Di~~A~~aG~~ 191 (224)
T PRK09449 173 MVGDNLHSDILGGINAGID 191 (224)
T ss_pred EEcCCcHHHHHHHHHCCCc
Confidence 9999973 55444445543
No 58
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=96.94 E-value=0.00059 Score=65.08 Aligned_cols=49 Identities=20% Similarity=0.314 Sum_probs=43.0
Q ss_pred EeeCchHHHHHHHhhhccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEE
Q 013428 309 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVY 358 (443)
Q Consensus 309 V~~RPgL~eFLe~Lsk~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~ 358 (443)
+.++||+.+||+++.+.+.++|-|++...++.++++.++... +|..++-
T Consensus 67 i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~lgi~~-~~an~l~ 115 (203)
T TIGR02137 67 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPT-LLCHKLE 115 (203)
T ss_pred CCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHHcCCch-hhceeeE
Confidence 578999999999999878999999999999999999998764 6665544
No 59
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=96.88 E-value=0.0027 Score=56.84 Aligned_cols=73 Identities=19% Similarity=0.155 Sum_probs=53.6
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh-hccEEEEEcCCcHHHHH---------
Q 013428 271 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAA--------- 340 (443)
Q Consensus 271 ~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd--------- 340 (443)
+.+++||||||++.... .|. .....|.+.+.|+++. +.++|+++|+-......
T Consensus 2 K~i~~DiDGTL~~~~~~-----~y~------------~~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~ 64 (126)
T TIGR01689 2 KRLVMDLDNTITLTENG-----DYA------------NVAPILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIH 64 (126)
T ss_pred CEEEEeCCCCcccCCCC-----ccc------------ccccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchh
Confidence 47899999999754211 110 1346788999999985 78999999999887766
Q ss_pred ---HHHHHhCCCCCeeeEEEEcc
Q 013428 341 ---QLLDILDPDGKLISRRVYRE 360 (443)
Q Consensus 341 ---~VLd~LDP~g~~f~~RL~Re 360 (443)
.+++.|+.++-.++..+.|.
T Consensus 65 ~~~~t~~wL~k~~ipYd~l~~~k 87 (126)
T TIGR01689 65 TLPIIILWLNQHNVPYDEIYVGK 87 (126)
T ss_pred hHHHHHHHHHHcCCCCceEEeCC
Confidence 77888888876666666654
No 60
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=96.86 E-value=0.00069 Score=61.41 Aligned_cols=92 Identities=16% Similarity=0.196 Sum_probs=72.6
Q ss_pred EeeCchHHHHHHHhhh-ccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEcccceeeC---CceeecccccCCCCCcEE
Q 013428 309 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 384 (443)
Q Consensus 309 V~~RPgL~eFLe~Lsk-~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~C~~~~---g~yiKDLs~LgrDl~kVI 384 (443)
+...||+.++|+.|.+ .+.++|-|++ .++..+++.++-.+ +|+.++..+.....+ ..|.+-+..+|..++++|
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~-~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v 163 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTD-YFDAIVDADEVKEGKPHPETFLLAAELLGVSPNECV 163 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHH-HCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHHeE
Confidence 5789999999999985 5999999988 78999999887765 788888766544322 245666778899999999
Q ss_pred EEECChhhhccCCCceeee
Q 013428 385 IIDNSPQVFRLQVNNGIPI 403 (443)
Q Consensus 385 IIDDsp~s~~~q~~NgIpI 403 (443)
+|+|++.-+.....+|++.
T Consensus 164 ~IgD~~~di~aA~~~G~~~ 182 (185)
T TIGR02009 164 VFEDALAGVQAARAAGMFA 182 (185)
T ss_pred EEeCcHhhHHHHHHCCCeE
Confidence 9999998776666677654
No 61
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=96.85 E-value=0.00079 Score=61.45 Aligned_cols=94 Identities=15% Similarity=0.165 Sum_probs=76.3
Q ss_pred EeeCchHHHHHHHhhhccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEcccceeeCC---ceeecccccCCCCCcEEE
Q 013428 309 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVAI 385 (443)
Q Consensus 309 V~~RPgL~eFLe~Lsk~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~C~~~~g---~yiKDLs~LgrDl~kVII 385 (443)
+..-|++ ++|+++.+.+.++|-|++.+.+++.+++.+.-.+ ||+..+..+++...+. .|.+-+.++|.+++++|+
T Consensus 87 ~~~~~~~-e~L~~L~~~~~l~I~T~~~~~~~~~~l~~~~l~~-~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~ 164 (188)
T PRK10725 87 VEPLPLI-EVVKAWHGRRPMAVGTGSESAIAEALLAHLGLRR-YFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVV 164 (188)
T ss_pred CCCccHH-HHHHHHHhCCCEEEEcCCchHHHHHHHHhCCcHh-HceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeEE
Confidence 3455764 8899998779999999999999999999998765 8998888877654332 467777889999999999
Q ss_pred EECChhhhccCCCceeeec
Q 013428 386 IDNSPQVFRLQVNNGIPIE 404 (443)
Q Consensus 386 IDDsp~s~~~q~~NgIpI~ 404 (443)
|+|++.-+......|++..
T Consensus 165 igDs~~di~aA~~aG~~~i 183 (188)
T PRK10725 165 FEDADFGIQAARAAGMDAV 183 (188)
T ss_pred EeccHhhHHHHHHCCCEEE
Confidence 9999988877777777654
No 62
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=96.85 E-value=0.0012 Score=69.02 Aligned_cols=97 Identities=10% Similarity=0.097 Sum_probs=81.0
Q ss_pred EeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEcccceeeC---CceeecccccCCCCCcEE
Q 013428 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 384 (443)
Q Consensus 309 V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~C~~~~---g~yiKDLs~LgrDl~kVI 384 (443)
+...||+.+||+.|. +.+.+.|-|++.+.+++.+++.++..+ ||+..+..+++...+ ..|.+-+..+|.+++++|
T Consensus 215 ~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~-yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl 293 (381)
T PLN02575 215 YRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRG-FFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCI 293 (381)
T ss_pred CCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHH-HceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEE
Confidence 457899999999998 559999999999999999999998775 899999888765432 257788889999999999
Q ss_pred EEECChhhhccCCCceeeeccc
Q 013428 385 IIDNSPQVFRLQVNNGIPIESW 406 (443)
Q Consensus 385 IIDDsp~s~~~q~~NgIpI~s~ 406 (443)
+|+|++.-.......|+.....
T Consensus 294 ~IGDS~~DIeAAk~AGm~~IgV 315 (381)
T PLN02575 294 VFGNSNQTVEAAHDARMKCVAV 315 (381)
T ss_pred EEcCCHHHHHHHHHcCCEEEEE
Confidence 9999998877766677665544
No 63
>PRK11587 putative phosphatase; Provisional
Probab=96.75 E-value=0.0025 Score=60.27 Aligned_cols=97 Identities=12% Similarity=0.080 Sum_probs=75.2
Q ss_pred EeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEcccceee---CCceeecccccCCCCCcEE
Q 013428 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGVDLAKVA 384 (443)
Q Consensus 309 V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~C~~~---~g~yiKDLs~LgrDl~kVI 384 (443)
+...||+.+||++|. +.+.++|-|++...++..+++..... +|...+..++.... ...|.+-+..+|..++++|
T Consensus 82 ~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~--~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~~l 159 (218)
T PRK11587 82 ITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLP--APEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECV 159 (218)
T ss_pred ceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCC--CccEEEEHHHhcCCCCCcHHHHHHHHHcCCCcccEE
Confidence 567999999999998 56999999999999888888877652 45566666554332 2356788888999999999
Q ss_pred EEECChhhhccCCCceeeecccc
Q 013428 385 IIDNSPQVFRLQVNNGIPIESWF 407 (443)
Q Consensus 385 IIDDsp~s~~~q~~NgIpI~s~~ 407 (443)
+|+|++.-.......|++...+.
T Consensus 160 ~igDs~~di~aA~~aG~~~i~v~ 182 (218)
T PRK11587 160 VVEDAPAGVLSGLAAGCHVIAVN 182 (218)
T ss_pred EEecchhhhHHHHHCCCEEEEEC
Confidence 99999987777667777654443
No 64
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=96.75 E-value=0.0017 Score=62.71 Aligned_cols=98 Identities=12% Similarity=0.015 Sum_probs=77.7
Q ss_pred EeeCchHHHHHHHhhh-ccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEcccceeeC---CceeecccccCC-CCCcE
Q 013428 309 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGV-DLAKV 383 (443)
Q Consensus 309 V~~RPgL~eFLe~Lsk-~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~C~~~~---g~yiKDLs~Lgr-Dl~kV 383 (443)
+...||+.++|++|++ .+.++|-|++...+++.+++.++..+-+|+.++..+.....+ ..|.+-+.++|. +++++
T Consensus 98 ~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~ 177 (253)
T TIGR01422 98 SSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDVPAGRPAPWMALKNAIELGVYDVAAC 177 (253)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccCCCCCCCHHHHHHHHHHcCCCCchhe
Confidence 5678999999999984 599999999999999999999987762246667666543322 356777888897 48999
Q ss_pred EEEECChhhhccCCCceeeeccc
Q 013428 384 AIIDNSPQVFRLQVNNGIPIESW 406 (443)
Q Consensus 384 IIIDDsp~s~~~q~~NgIpI~s~ 406 (443)
|+|.|++.-+......|+.....
T Consensus 178 l~IGDs~~Di~aA~~aGi~~i~v 200 (253)
T TIGR01422 178 VKVGDTVPDIEEGRNAGMWTVGL 200 (253)
T ss_pred EEECCcHHHHHHHHHCCCeEEEE
Confidence 99999998887777777776554
No 65
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=96.72 E-value=0.0025 Score=69.35 Aligned_cols=109 Identities=12% Similarity=0.151 Sum_probs=72.1
Q ss_pred CCceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh-hccEEEEEcCCcH----------
Q 013428 268 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQS---------- 336 (443)
Q Consensus 268 ~kk~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~---------- 336 (443)
.+.+++.||+||||+..... ..|. .....| ..+-||+.+.|+.|. +.|.|+|+|+...
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg----~~~~------~~~~d~-~~l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~ 234 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSG----KVFP------KGPDDW-QIIFPEIPEKLKELEADGFKICIFTNQGGIARGKINADD 234 (526)
T ss_pred ccCcEEEEECCCCccccCCC----ccCC------CCHHHe-eecccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHH
Confidence 34579999999999965311 0010 011112 224699999999998 5699999999766
Q ss_pred --HHHHHHHHHhCCCCCeeeEEEEcccceeeC---Cceeeccccc----CCCCCcEEEEECCh
Q 013428 337 --IYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVL----GVDLAKVAIIDNSP 390 (443)
Q Consensus 337 --~YAd~VLd~LDP~g~~f~~RL~Re~C~~~~---g~yiKDLs~L----grDl~kVIIIDDsp 390 (443)
..+..+++.++. .|...+..+.|.+.. |.+..-+..+ +.+++++++|-|+.
T Consensus 235 ~~~ki~~iL~~lgi---pfdviia~~~~~~RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDaa 294 (526)
T TIGR01663 235 FKAKIEAIVAKLGV---PFQVFIAIGAGFYRKPLTGMWDHLKEEANDGTEIQEDDCFFVGDAA 294 (526)
T ss_pred HHHHHHHHHHHcCC---ceEEEEeCCCCCCCCCCHHHHHHHHHhcCcccCCCHHHeEEeCCcc
Confidence 468888888875 366555555554432 3443333333 57899999999987
No 66
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=96.56 E-value=0.0028 Score=59.34 Aligned_cols=93 Identities=17% Similarity=0.219 Sum_probs=72.0
Q ss_pred EeeCchHHHHHHHhhh-ccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEcccceeeC---CceeecccccCCCCCcEE
Q 013428 309 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 384 (443)
Q Consensus 309 V~~RPgL~eFLe~Lsk-~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~C~~~~---g~yiKDLs~LgrDl~kVI 384 (443)
...+||+.+||+.+.+ .+.++|.|++...++..+++.++... +|...+..+.....+ ..+.+-+..++.+.++++
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i 170 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIAD-YFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEML 170 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCcc-CccEEEcCCCCCCCCcChHHHHHHHHHcCCChhheE
Confidence 6689999999999985 69999999999999999999998764 677655554432221 235566678899999999
Q ss_pred EEECChhhhccCCCceee
Q 013428 385 IIDNSPQVFRLQVNNGIP 402 (443)
Q Consensus 385 IIDDsp~s~~~q~~NgIp 402 (443)
+|+|++.-+......|++
T Consensus 171 ~igD~~~Di~~a~~~g~~ 188 (226)
T PRK13222 171 FVGDSRNDIQAARAAGCP 188 (226)
T ss_pred EECCCHHHHHHHHHCCCc
Confidence 999999777665555554
No 67
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=96.49 E-value=0.0052 Score=56.29 Aligned_cols=94 Identities=14% Similarity=0.158 Sum_probs=67.1
Q ss_pred EeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEccccee-eCCc------------eeeccc
Q 013428 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIF-SDGT------------YTKDLT 374 (443)
Q Consensus 309 V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~C~~-~~g~------------yiKDLs 374 (443)
+..+||+.++|+++. +.+.++|.|++...+++.+++.+.... +|...+..+.... .... +.+-+.
T Consensus 79 ~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~-~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~~ 157 (201)
T TIGR01491 79 ISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDY-VYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLKR 157 (201)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCe-EEEEEEEEcCCCeEecceeeEEccccHHHHHHHHHH
Confidence 678999999999998 569999999999999999999998664 6665554322111 1111 111234
Q ss_pred ccCCCCCcEEEEECChhhhccCCCceeee
Q 013428 375 VLGVDLAKVAIIDNSPQVFRLQVNNGIPI 403 (443)
Q Consensus 375 ~LgrDl~kVIIIDDsp~s~~~q~~NgIpI 403 (443)
.+|.+++++++|.|+..-...-...|+++
T Consensus 158 ~~~~~~~~~i~iGDs~~D~~~a~~ag~~~ 186 (201)
T TIGR01491 158 ELNPSLTETVAVGDSKNDLPMFEVADISI 186 (201)
T ss_pred HhCCCHHHEEEEcCCHhHHHHHHhcCCeE
Confidence 56888999999999987665544455554
No 68
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=96.44 E-value=0.0034 Score=62.12 Aligned_cols=94 Identities=13% Similarity=0.139 Sum_probs=73.8
Q ss_pred EeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEcccceeeC---CceeecccccCCCCCcEE
Q 013428 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 384 (443)
Q Consensus 309 V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~C~~~~---g~yiKDLs~LgrDl~kVI 384 (443)
+..+||+.++|+++. +.+.++|.|++...++..+++.++-.+ +|...+..+.+.... ..|.+-+.++|.+++++|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~-~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l 178 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGR-YFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSL 178 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHh-hCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHEE
Confidence 457899999999998 569999999999999999999987654 788766665433221 235566677899999999
Q ss_pred EEECChhhhccCCCceeee
Q 013428 385 IIDNSPQVFRLQVNNGIPI 403 (443)
Q Consensus 385 IIDDsp~s~~~q~~NgIpI 403 (443)
+|+|++.-......+|+..
T Consensus 179 ~IGD~~~Di~aA~~aGi~~ 197 (272)
T PRK13223 179 FVGDSRSDVLAAKAAGVQC 197 (272)
T ss_pred EECCCHHHHHHHHHCCCeE
Confidence 9999998776666677653
No 69
>PRK08238 hypothetical protein; Validated
Probab=96.36 E-value=0.0044 Score=66.69 Aligned_cols=77 Identities=14% Similarity=0.081 Sum_probs=51.9
Q ss_pred EeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEcccceeeCC--ceeecccccCCCCCcEEE
Q 013428 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG--TYTKDLTVLGVDLAKVAI 385 (443)
Q Consensus 309 V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~C~~~~g--~yiKDLs~LgrDl~kVII 385 (443)
...+|++.++|+++. +.+.++|-|++.+.+++++++.++- |+..+..+......+ ...+-.+.++ .+.++.
T Consensus 71 lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl----Fd~Vigsd~~~~~kg~~K~~~l~~~l~--~~~~~y 144 (479)
T PRK08238 71 LPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL----FDGVFASDGTTNLKGAAKAAALVEAFG--ERGFDY 144 (479)
T ss_pred CCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC----CCEEEeCCCccccCCchHHHHHHHHhC--ccCeeE
Confidence 357899999999997 6699999999999999999999854 666665543221111 1111112233 244677
Q ss_pred EECChh
Q 013428 386 IDNSPQ 391 (443)
Q Consensus 386 IDDsp~ 391 (443)
+-|+..
T Consensus 145 vGDS~~ 150 (479)
T PRK08238 145 AGNSAA 150 (479)
T ss_pred ecCCHH
Confidence 777774
No 70
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=96.35 E-value=0.0056 Score=59.87 Aligned_cols=98 Identities=12% Similarity=0.058 Sum_probs=76.4
Q ss_pred EeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEcccceeeC---CceeecccccCCC-CCcE
Q 013428 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVD-LAKV 383 (443)
Q Consensus 309 V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~C~~~~---g~yiKDLs~LgrD-l~kV 383 (443)
+..-||+.++|+.|. +.+.++|-|++.+..+..+++.+...+-+|...+..++....+ ..|.+-+.++|.. ++.+
T Consensus 100 ~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~~e~ 179 (267)
T PRK13478 100 ATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYDVAAC 179 (267)
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCCCcce
Confidence 467899999999998 5699999999999999999998876653346777776644332 3567778888975 6899
Q ss_pred EEEECChhhhccCCCceeeeccc
Q 013428 384 AIIDNSPQVFRLQVNNGIPIESW 406 (443)
Q Consensus 384 IIIDDsp~s~~~q~~NgIpI~s~ 406 (443)
|+|+|++.-+......|++....
T Consensus 180 l~IGDs~~Di~aA~~aG~~~i~v 202 (267)
T PRK13478 180 VKVDDTVPGIEEGLNAGMWTVGV 202 (267)
T ss_pred EEEcCcHHHHHHHHHCCCEEEEE
Confidence 99999998777766777765443
No 71
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=96.33 E-value=0.0014 Score=67.11 Aligned_cols=95 Identities=15% Similarity=0.183 Sum_probs=65.7
Q ss_pred EeeCchHHHHHHHhhh-ccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEccccee------------eCCceeec-cc
Q 013428 309 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIF------------SDGTYTKD-LT 374 (443)
Q Consensus 309 V~~RPgL~eFLe~Lsk-~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~C~~------------~~g~yiKD-Ls 374 (443)
+.++||+.+||+.+.+ .+.++|.|++...+++.+++.++... .+...+--..-.+ .+...++. ++
T Consensus 180 l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~-~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~ 258 (322)
T PRK11133 180 LPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDA-AVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQ 258 (322)
T ss_pred CCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCe-EEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHH
Confidence 6789999999999995 59999999999999999999987654 3333321111000 01112222 34
Q ss_pred ccCCCCCcEEEEECChhhhccCCCceeeec
Q 013428 375 VLGVDLAKVAIIDNSPQVFRLQVNNGIPIE 404 (443)
Q Consensus 375 ~LgrDl~kVIIIDDsp~s~~~q~~NgIpI~ 404 (443)
.+|.+++++|.|-|+..-..+-..-|+.|.
T Consensus 259 ~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA 288 (322)
T PRK11133 259 EYEIPLAQTVAIGDGANDLPMIKAAGLGIA 288 (322)
T ss_pred HcCCChhhEEEEECCHHHHHHHHHCCCeEE
Confidence 678899999999999977765444555554
No 72
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=96.33 E-value=0.0062 Score=56.83 Aligned_cols=114 Identities=16% Similarity=0.125 Sum_probs=71.5
Q ss_pred CceEEEEecCccccccc-ccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHHh
Q 013428 269 KSVTLVLDLDETLVHST-LEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDIL 346 (443)
Q Consensus 269 kk~tLVLDLDeTLVhS~-~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~L 346 (443)
+.+.+|+|+||||+... +..... .....+.. |.+ .=++.+. +.++++|-|......+..+++.+
T Consensus 20 ~ikli~~D~Dgtl~~~~i~~~~~~-----------~~~~~~~~-~d~--~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~l 85 (183)
T PRK09484 20 NIRLLICDVDGVFSDGLIYMGNNG-----------EELKAFNV-RDG--YGIRCLLTSGIEVAIITGRKSKLVEDRMTTL 85 (183)
T ss_pred CceEEEEcCCeeeecCEEEEcCCC-----------CEEEEEec-cch--HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHc
Confidence 46799999999999753 111110 11111111 222 1233444 67999999999999999999998
Q ss_pred CCCCCeeeEEEEcccceeeCCceeecccccCCCCCcEEEEECChhhhccCCCceeee
Q 013428 347 DPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPI 403 (443)
Q Consensus 347 DP~g~~f~~RL~Re~C~~~~g~yiKDLs~LgrDl~kVIIIDDsp~s~~~q~~NgIpI 403 (443)
.... +|. .+.-....+.+-+..+|.+.+++++|-|+..-...-...|+.+
T Consensus 86 gl~~-~f~------g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~ 135 (183)
T PRK09484 86 GITH-LYQ------GQSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSV 135 (183)
T ss_pred CCce-eec------CCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeE
Confidence 7653 443 1111112344556677999999999999987665544455554
No 73
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=96.31 E-value=0.0021 Score=60.44 Aligned_cols=95 Identities=7% Similarity=0.065 Sum_probs=74.6
Q ss_pred EeeCchHHHHHHHhhhccEEEEEcCCcHHHHHHHHHHhCCCCCeee-EEEEcccceee---CCceeecccccCCCCCcEE
Q 013428 309 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLIS-RRVYRESCIFS---DGTYTKDLTVLGVDLAKVA 384 (443)
Q Consensus 309 V~~RPgL~eFLe~Lsk~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~-~RL~Re~C~~~---~g~yiKDLs~LgrDl~kVI 384 (443)
+...||+.++|+.|. +.++|.|++.+.+++.+++.++... +|. ..+..++.... ...|.+-+.++|..++++|
T Consensus 87 ~~~~~gv~~~L~~L~--~~~~ivTn~~~~~~~~~l~~~~l~~-~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l 163 (221)
T PRK10563 87 LEPIAGANALLESIT--VPMCVVSNGPVSKMQHSLGKTGMLH-YFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENCI 163 (221)
T ss_pred CCcCCCHHHHHHHcC--CCEEEEeCCcHHHHHHHHHhcChHH-hCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHeE
Confidence 567899999999994 8999999999999999999887765 675 45555443322 2356777888999999999
Q ss_pred EEECChhhhccCCCceeeeccc
Q 013428 385 IIDNSPQVFRLQVNNGIPIESW 406 (443)
Q Consensus 385 IIDDsp~s~~~q~~NgIpI~s~ 406 (443)
+|+|++.-.......|+++.-+
T Consensus 164 ~igDs~~di~aA~~aG~~~i~~ 185 (221)
T PRK10563 164 LVDDSSAGAQSGIAAGMEVFYF 185 (221)
T ss_pred EEeCcHhhHHHHHHCCCEEEEE
Confidence 9999998776666777776543
No 74
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=96.27 E-value=0.0071 Score=58.46 Aligned_cols=94 Identities=11% Similarity=0.084 Sum_probs=62.5
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh-hccEEEEEcCCcHHHHH--HHHHHhC
Q 013428 271 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAA--QLLDILD 347 (443)
Q Consensus 271 ~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd--~VLd~LD 347 (443)
..++||+||||.+.. ..-||+.++|++|. +.+.++|.|++.+..++ +.++.++
T Consensus 9 ~~~~~D~dG~l~~~~------------------------~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~g 64 (242)
T TIGR01459 9 DVFLLDLWGVIIDGN------------------------HTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLG 64 (242)
T ss_pred CEEEEecccccccCC------------------------ccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCC
Confidence 478999999997642 23699999999998 56999999999888776 7788887
Q ss_pred CCCCeeeEEEEcccceeeCCceeecccccCCCCCcEEEEECCh
Q 013428 348 PDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSP 390 (443)
Q Consensus 348 P~g~~f~~RL~Re~C~~~~g~yiKDLs~LgrDl~kVIIIDDsp 390 (443)
....+|...+....... ..+..-+..+|...+++++|-|+.
T Consensus 65 l~~~~~~~Ii~s~~~~~--~~l~~~~~~~~~~~~~~~~vGd~~ 105 (242)
T TIGR01459 65 INADLPEMIISSGEIAV--QMILESKKRFDIRNGIIYLLGHLE 105 (242)
T ss_pred CCccccceEEccHHHHH--HHHHhhhhhccCCCceEEEeCCcc
Confidence 65325666666443221 011111233444455566666644
No 75
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=96.27 E-value=0.0053 Score=61.33 Aligned_cols=97 Identities=12% Similarity=0.172 Sum_probs=72.2
Q ss_pred EeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHHhCCC--CCeeeEEEEcccceeeC---CceeecccccCCCCCc
Q 013428 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD--GKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAK 382 (443)
Q Consensus 309 V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~LDP~--g~~f~~RL~Re~C~~~~---g~yiKDLs~LgrDl~k 382 (443)
+...||+.+||+++. +.|.++|.|++...++..+++.+.-. ..+|... ..+.+...+ ..|.+-+..+|.++++
T Consensus 143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v-~~~~~~~~KP~p~~~~~a~~~~~~~p~~ 221 (286)
T PLN02779 143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVF-AGDDVPKKKPDPDIYNLAAETLGVDPSR 221 (286)
T ss_pred CCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEE-eccccCCCCCCHHHHHHHHHHhCcChHH
Confidence 478999999999998 56999999999999999999876322 1223322 444433221 2566777888999999
Q ss_pred EEEEECChhhhccCCCceeeeccc
Q 013428 383 VAIIDNSPQVFRLQVNNGIPIESW 406 (443)
Q Consensus 383 VIIIDDsp~s~~~q~~NgIpI~s~ 406 (443)
+|+|+|++.-+.....+|+.....
T Consensus 222 ~l~IGDs~~Di~aA~~aG~~~i~v 245 (286)
T PLN02779 222 CVVVEDSVIGLQAAKAAGMRCIVT 245 (286)
T ss_pred EEEEeCCHHhHHHHHHcCCEEEEE
Confidence 999999998887766777765544
No 76
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=96.25 E-value=0.0067 Score=56.72 Aligned_cols=93 Identities=14% Similarity=0.106 Sum_probs=76.3
Q ss_pred EeeCchHHHHHHHhhhccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEcccceeeC---CceeecccccCCCCCcEEE
Q 013428 309 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVAI 385 (443)
Q Consensus 309 V~~RPgL~eFLe~Lsk~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~C~~~~---g~yiKDLs~LgrDl~kVII 385 (443)
+...|++.++|+.+.+.|.++|.|.+...++...+..+.. ..+|+..++.+.....+ ..|..-+..+|.+++++++
T Consensus 98 ~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~~gl-~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~l~ 176 (229)
T COG1011 98 LPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQLGL-LDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEALF 176 (229)
T ss_pred CccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHHcCC-hhhhheEEEecccccCCCCcHHHHHHHHHcCCCcceEEE
Confidence 6778999999999997799999999999999999999984 45899999988766443 3577778889999999999
Q ss_pred EECChhhh-ccCCCceee
Q 013428 386 IDNSPQVF-RLQVNNGIP 402 (443)
Q Consensus 386 IDDsp~s~-~~q~~NgIp 402 (443)
|||+...- .....-|+.
T Consensus 177 VgD~~~~di~gA~~~G~~ 194 (229)
T COG1011 177 VGDSLENDILGARALGMK 194 (229)
T ss_pred ECCChhhhhHHHHhcCcE
Confidence 99999766 333333443
No 77
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=96.24 E-value=0.002 Score=60.15 Aligned_cols=98 Identities=18% Similarity=0.100 Sum_probs=70.3
Q ss_pred EeeCchHHHHHHHhhh-ccEEEEEcCCcHHH--HHHHHHHhCCCCCeeeEEEEcccceee---CCceeecccccCCCCCc
Q 013428 309 VKQRPHLKTFLERVAE-MFEVVIFTASQSIY--AAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGVDLAK 382 (443)
Q Consensus 309 V~~RPgL~eFLe~Lsk-~YEIVIfTAs~~~Y--Ad~VLd~LDP~g~~f~~RL~Re~C~~~---~g~yiKDLs~LgrDl~k 382 (443)
+...||+.++|++|.+ .|.++|.|++...+ +...+..++.. .+|+..+..+..... ...|.+-++++|.++++
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~-~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~~ 171 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIM-ALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPEE 171 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhH-hhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHHH
Confidence 5678999999999985 69999999987654 32223223222 368777765544322 23567778889999999
Q ss_pred EEEEECChhhhccCCCceeeecccc
Q 013428 383 VAIIDNSPQVFRLQVNNGIPIESWF 407 (443)
Q Consensus 383 VIIIDDsp~s~~~q~~NgIpI~s~~ 407 (443)
+++|||++.........|+....+.
T Consensus 172 ~l~i~D~~~di~aA~~aG~~~i~v~ 196 (211)
T TIGR02247 172 CVFLDDLGSNLKPAAALGITTIKVS 196 (211)
T ss_pred eEEEcCCHHHHHHHHHcCCEEEEEC
Confidence 9999999988877777787765443
No 78
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=96.22 E-value=0.0049 Score=57.83 Aligned_cols=95 Identities=16% Similarity=0.167 Sum_probs=75.0
Q ss_pred EeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHHhCCCC-CeeeEEEEcccceee---CCceeecccccCCC-CCc
Q 013428 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDG-KLISRRVYRESCIFS---DGTYTKDLTVLGVD-LAK 382 (443)
Q Consensus 309 V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~LDP~g-~~f~~RL~Re~C~~~---~g~yiKDLs~LgrD-l~k 382 (443)
+.+.||+.+||++|+ +.|.++|-|++...++..+++.++... .+|...+..+.-... ...|.+-+.++|.. +++
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~ 165 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQS 165 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCChhH
Confidence 468899999999997 679999999999999999999998652 588877776553221 23456667788886 799
Q ss_pred EEEEECChhhhccCCCceeee
Q 013428 383 VAIIDNSPQVFRLQVNNGIPI 403 (443)
Q Consensus 383 VIIIDDsp~s~~~q~~NgIpI 403 (443)
+++|+|++.-.......|++.
T Consensus 166 ~~~igD~~~Di~aa~~aG~~~ 186 (220)
T TIGR03351 166 VAVAGDTPNDLEAGINAGAGA 186 (220)
T ss_pred eEEeCCCHHHHHHHHHCCCCe
Confidence 999999998776666677765
No 79
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=96.18 E-value=0.0053 Score=56.92 Aligned_cols=90 Identities=14% Similarity=0.097 Sum_probs=67.5
Q ss_pred eeCchHHHHHHHhhh-ccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEcccceeeC---CceeecccccCCCCCcEEE
Q 013428 310 KQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVAI 385 (443)
Q Consensus 310 ~~RPgL~eFLe~Lsk-~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~C~~~~---g~yiKDLs~LgrDl~kVII 385 (443)
...||+.++|++|++ .|.++|.|++...+ ..+++.++-.+ +|...+..+.+...+ ..|.+-++.+|.+++++|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~-~~~l~~~~l~~-~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~~~ 182 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSRL-RGLLEALGLLE-YFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEALH 182 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchhH-HHHHHHCCcHH-hcceEEeecccCCCCCCHHHHHHHHHHcCCChhHEEE
Confidence 567999999999985 59999999988764 77888876654 788887766554332 2466777888999999999
Q ss_pred EECCh-hhhccCCCcee
Q 013428 386 IDNSP-QVFRLQVNNGI 401 (443)
Q Consensus 386 IDDsp-~s~~~q~~NgI 401 (443)
|+|++ .-.......|+
T Consensus 183 IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 183 IGDSLRNDYQGARAAGW 199 (203)
T ss_pred ECCCchHHHHHHHHcCC
Confidence 99997 34444334444
No 80
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=96.14 E-value=0.0044 Score=56.19 Aligned_cols=91 Identities=15% Similarity=0.156 Sum_probs=69.0
Q ss_pred eeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEcccceee---CCceeecccccCCCCCcEEE
Q 013428 310 KQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGVDLAKVAI 385 (443)
Q Consensus 310 ~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~C~~~---~g~yiKDLs~LgrDl~kVII 385 (443)
...||+.++|++|+ +.+.+.|-|++. .+..+++.++... +|+..+..++-... ...|.+-+++++.+.+++|+
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~--~~~~~l~~~~l~~-~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~v~ 163 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASK--NAPTVLEKLGLID-YFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSECIG 163 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCc--cHHHHHHhcCcHh-hCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHeEE
Confidence 56899999999998 559999999764 3567888887764 78887765432221 23566778888999999999
Q ss_pred EECChhhhccCCCceeee
Q 013428 386 IDNSPQVFRLQVNNGIPI 403 (443)
Q Consensus 386 IDDsp~s~~~q~~NgIpI 403 (443)
|+|++.-+.....+|++.
T Consensus 164 vgD~~~di~aA~~aG~~~ 181 (185)
T TIGR01990 164 IEDAQAGIEAIKAAGMFA 181 (185)
T ss_pred EecCHHHHHHHHHcCCEE
Confidence 999998776666677654
No 81
>PLN02940 riboflavin kinase
Probab=96.11 E-value=0.0043 Score=64.63 Aligned_cols=96 Identities=10% Similarity=0.091 Sum_probs=77.1
Q ss_pred EeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHH-HhCCCCCeeeEEEEcccceeeC---CceeecccccCCCCCcE
Q 013428 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLD-ILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKV 383 (443)
Q Consensus 309 V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd-~LDP~g~~f~~RL~Re~C~~~~---g~yiKDLs~LgrDl~kV 383 (443)
+...||+.++|++|. +.+.+.|-|++.+.++..+++ .++-. .+|+.++..+++...+ ..|.+-++.+|..++++
T Consensus 92 ~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~-~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~~~ 170 (382)
T PLN02940 92 IKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWK-ESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNC 170 (382)
T ss_pred CCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChH-hhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChhHE
Confidence 457899999999998 559999999999999998887 55554 4899999888765432 35677788899999999
Q ss_pred EEEECChhhhccCCCceeeecc
Q 013428 384 AIIDNSPQVFRLQVNNGIPIES 405 (443)
Q Consensus 384 IIIDDsp~s~~~q~~NgIpI~s 405 (443)
++|+|++.-.......|+....
T Consensus 171 l~VGDs~~Di~aA~~aGi~~I~ 192 (382)
T PLN02940 171 LVIEDSLPGVMAGKAAGMEVIA 192 (382)
T ss_pred EEEeCCHHHHHHHHHcCCEEEE
Confidence 9999999877666666766443
No 82
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=96.04 E-value=0.0063 Score=60.88 Aligned_cols=93 Identities=15% Similarity=0.131 Sum_probs=55.6
Q ss_pred CCceEEEEecCccccccccc----ccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHH
Q 013428 268 RKSVTLVLDLDETLVHSTLE----YCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQL 342 (443)
Q Consensus 268 ~kk~tLVLDLDeTLVhS~~~----~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~V 342 (443)
.+|+.+|||+|||+++.+.. ......|.-. .+..-........-||+.+||+++. +...++|.|.....+.+..
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~-~w~~wv~~~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T 151 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPE-TWDKWVQAAQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAAT 151 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCCHH-HHHHHHHcCCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHH
Confidence 45789999999999987621 1111111000 0000001123556799999999997 5689999999886666644
Q ss_pred H---HHhCCCCCeeeEEEEccc
Q 013428 343 L---DILDPDGKLISRRVYRES 361 (443)
Q Consensus 343 L---d~LDP~g~~f~~RL~Re~ 361 (443)
+ +.++.....+.+.++|+.
T Consensus 152 ~~~Lkk~Gi~~~~~d~lllr~~ 173 (266)
T TIGR01533 152 LKNLKRFGFPQADEEHLLLKKD 173 (266)
T ss_pred HHHHHHcCcCCCCcceEEeCCC
Confidence 4 444443323456677753
No 83
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=96.01 E-value=0.013 Score=56.58 Aligned_cols=86 Identities=14% Similarity=0.243 Sum_probs=63.5
Q ss_pred EeeCchHHHHHHHhhh-ccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEcccceeeC---Ccee----ec------cc
Q 013428 309 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYT----KD------LT 374 (443)
Q Consensus 309 V~~RPgL~eFLe~Lsk-~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~C~~~~---g~yi----KD------Ls 374 (443)
+.++||+.+.++.+++ .+.++|.|+|...++++|.+.|..+. .+..++-.++=.+.. |..+ |. +.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~-~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~ 154 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDY-VVANELEIDDGKLTGRVVGPICDGEGKAKALRELAA 154 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCch-heeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHH
Confidence 8899999999999994 59999999999999999999999886 566666655411111 1111 11 23
Q ss_pred ccCCCCCcEEEEECChhhhcc
Q 013428 375 VLGVDLAKVAIIDNSPQVFRL 395 (443)
Q Consensus 375 ~LgrDl~kVIIIDDsp~s~~~ 395 (443)
.+|.++++++-+=|+..-..+
T Consensus 155 ~~g~~~~~~~a~gDs~nDlpm 175 (212)
T COG0560 155 ELGIPLEETVAYGDSANDLPM 175 (212)
T ss_pred HcCCCHHHeEEEcCchhhHHH
Confidence 458888889998888765543
No 84
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=96.00 E-value=0.0057 Score=59.35 Aligned_cols=95 Identities=12% Similarity=0.089 Sum_probs=70.2
Q ss_pred EeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHHhC---CCCCeeeEEEEccccee-eCCceeecccccCCCCCcE
Q 013428 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILD---PDGKLISRRVYRESCIF-SDGTYTKDLTVLGVDLAKV 383 (443)
Q Consensus 309 V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~LD---P~g~~f~~RL~Re~C~~-~~g~yiKDLs~LgrDl~kV 383 (443)
..+.||+.++|+++. +.+.++|+|++...+...+++..+ .. .+|+..+....+.. ....|.+-+..+|.+++++
T Consensus 94 ~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~-~~f~~~fd~~~g~KP~p~~y~~i~~~lgv~p~e~ 172 (220)
T TIGR01691 94 SHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLT-PYFSGYFDTTVGLKTEAQSYVKIAGQLGSPPREI 172 (220)
T ss_pred cCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchh-hhcceEEEeCcccCCCHHHHHHHHHHhCcChhHE
Confidence 567899999999997 579999999999999998888763 22 24554432111111 1236778888999999999
Q ss_pred EEEECChhhhccCCCceeeec
Q 013428 384 AIIDNSPQVFRLQVNNGIPIE 404 (443)
Q Consensus 384 IIIDDsp~s~~~q~~NgIpI~ 404 (443)
++|+|++.-.......|+...
T Consensus 173 lfVgDs~~Di~AA~~AG~~ti 193 (220)
T TIGR01691 173 LFLSDIINELDAARKAGLHTG 193 (220)
T ss_pred EEEeCCHHHHHHHHHcCCEEE
Confidence 999999987766666666643
No 85
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=95.97 E-value=0.015 Score=54.09 Aligned_cols=82 Identities=16% Similarity=0.184 Sum_probs=65.4
Q ss_pred eCchHHHHHHHhhh-ccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEcccceee--CCceeecccccCCCCCcEEEEE
Q 013428 311 QRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS--DGTYTKDLTVLGVDLAKVAIID 387 (443)
Q Consensus 311 ~RPgL~eFLe~Lsk-~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~C~~~--~g~yiKDLs~LgrDl~kVIIID 387 (443)
..|+..++|+.|++ .+.++|.|++.+.++..+++.+.-.. +|...+..++.... ...|.+-+..+|.+.+++|+|.
T Consensus 107 ~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~-~f~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~i~vG 185 (197)
T TIGR01548 107 TLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEI-LFPVQIWMEDCPPKPNPEPLILAAKALGVEACHAAMVG 185 (197)
T ss_pred cccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchh-hCCEEEeecCCCCCcCHHHHHHHHHHhCcCcccEEEEe
Confidence 34556999999984 59999999999999999999998765 88888876654321 2245667778899999999999
Q ss_pred CChhhh
Q 013428 388 NSPQVF 393 (443)
Q Consensus 388 Dsp~s~ 393 (443)
|++.-.
T Consensus 186 D~~~Di 191 (197)
T TIGR01548 186 DTVDDI 191 (197)
T ss_pred CCHHHH
Confidence 998543
No 86
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=95.89 E-value=0.013 Score=51.89 Aligned_cols=82 Identities=12% Similarity=0.058 Sum_probs=63.7
Q ss_pred EeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEcccceee--CCceeecccccCCCCCcEEE
Q 013428 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS--DGTYTKDLTVLGVDLAKVAI 385 (443)
Q Consensus 309 V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~C~~~--~g~yiKDLs~LgrDl~kVII 385 (443)
....||+.++|+.+. +.+.++|.|++.+.++..+++.+ . ..+|...+..++.... ...|.+-+.++|.+. ++++
T Consensus 63 ~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l-~~~f~~i~~~~~~~~Kp~~~~~~~~~~~~~~~~-~~l~ 139 (154)
T TIGR01549 63 EAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-L-GDYFDLILGSDEFGAKPEPEIFLAALESLGLPP-EVLH 139 (154)
T ss_pred heeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-H-HhcCcEEEecCCCCCCcCHHHHHHHHHHcCCCC-CEEE
Confidence 445699999999997 56999999999999999999996 2 3478777777665411 124566677888888 9999
Q ss_pred EECChhhh
Q 013428 386 IDNSPQVF 393 (443)
Q Consensus 386 IDDsp~s~ 393 (443)
|.|++.-.
T Consensus 140 iGDs~~Di 147 (154)
T TIGR01549 140 VGDNLNDI 147 (154)
T ss_pred EeCCHHHH
Confidence 99997543
No 87
>PLN02811 hydrolase
Probab=95.73 E-value=0.0091 Score=56.65 Aligned_cols=97 Identities=13% Similarity=0.110 Sum_probs=71.0
Q ss_pred EeeCchHHHHHHHhhh-ccEEEEEcCCcHHHHHH-HHHHhCCCCCeeeEEEEcc--cceee---CCceeecccccC---C
Q 013428 309 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQ-LLDILDPDGKLISRRVYRE--SCIFS---DGTYTKDLTVLG---V 378 (443)
Q Consensus 309 V~~RPgL~eFLe~Lsk-~YEIVIfTAs~~~YAd~-VLd~LDP~g~~f~~RL~Re--~C~~~---~g~yiKDLs~Lg---r 378 (443)
+.+.||+.++|+.|++ .|.++|-|++.+.+... +++..... .+|...++.+ ++... ...|.+-+..+| .
T Consensus 77 ~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~-~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~ 155 (220)
T PLN02811 77 SDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELF-SLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPV 155 (220)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHH-hhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCC
Confidence 4568999999999985 69999999998875553 33322222 3788888877 54432 335667777775 8
Q ss_pred CCCcEEEEECChhhhccCCCceeeeccc
Q 013428 379 DLAKVAIIDNSPQVFRLQVNNGIPIESW 406 (443)
Q Consensus 379 Dl~kVIIIDDsp~s~~~q~~NgIpI~s~ 406 (443)
.++++|+|+|++.-+......|++....
T Consensus 156 ~~~~~v~IgDs~~di~aA~~aG~~~i~v 183 (220)
T PLN02811 156 DPGKVLVFEDAPSGVEAAKNAGMSVVMV 183 (220)
T ss_pred CccceEEEeccHhhHHHHHHCCCeEEEE
Confidence 8999999999998887776777766544
No 88
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=95.50 E-value=0.021 Score=67.01 Aligned_cols=97 Identities=10% Similarity=0.103 Sum_probs=80.0
Q ss_pred eCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEcccceeeC---CceeecccccCCCCCcEEEE
Q 013428 311 QRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVAII 386 (443)
Q Consensus 311 ~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~C~~~~---g~yiKDLs~LgrDl~kVIII 386 (443)
..||+.+||++|. +.|.++|.|++...+++.+++.+.-...+|+..+..+++...+ ..|.+-++++|.+++++|+|
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v~I 241 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECVVI 241 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccEEEE
Confidence 4799999999998 5699999999999999999999887545789888877765432 36778888999999999999
Q ss_pred ECChhhhccCCCceeeecccc
Q 013428 387 DNSPQVFRLQVNNGIPIESWF 407 (443)
Q Consensus 387 DDsp~s~~~q~~NgIpI~s~~ 407 (443)
+|++.-+......|++.....
T Consensus 242 gDs~~Di~AA~~aGm~~I~v~ 262 (1057)
T PLN02919 242 EDALAGVQAARAAGMRCIAVT 262 (1057)
T ss_pred cCCHHHHHHHHHcCCEEEEEC
Confidence 999988777667777655443
No 89
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=95.31 E-value=0.018 Score=61.11 Aligned_cols=92 Identities=12% Similarity=0.152 Sum_probs=70.8
Q ss_pred EeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEccccee--eCCceeecccccCCCCCcEEE
Q 013428 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIF--SDGTYTKDLTVLGVDLAKVAI 385 (443)
Q Consensus 309 V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~C~~--~~g~yiKDLs~LgrDl~kVII 385 (443)
+...||+.++|++|. +.+.+.|.|++...++..+++.++-.. ||...+..+.... .+..|.+-+..++ ++++|+
T Consensus 329 ~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~-~f~~i~~~d~v~~~~kP~~~~~al~~l~--~~~~v~ 405 (459)
T PRK06698 329 GALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQ-WVTETFSIEQINSLNKSDLVKSILNKYD--IKEAAV 405 (459)
T ss_pred CCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHh-hcceeEecCCCCCCCCcHHHHHHHHhcC--cceEEE
Confidence 567899999999998 569999999999999999999998775 8888887665421 1223444455554 588999
Q ss_pred EECChhhhccCCCceeee
Q 013428 386 IDNSPQVFRLQVNNGIPI 403 (443)
Q Consensus 386 IDDsp~s~~~q~~NgIpI 403 (443)
|.|++.-+......|+..
T Consensus 406 VGDs~~Di~aAk~AG~~~ 423 (459)
T PRK06698 406 VGDRLSDINAAKDNGLIA 423 (459)
T ss_pred EeCCHHHHHHHHHCCCeE
Confidence 999998776666667654
No 90
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=95.28 E-value=0.044 Score=51.99 Aligned_cols=96 Identities=11% Similarity=0.065 Sum_probs=64.7
Q ss_pred EeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEE--EcccceeeC-------------Cceeec
Q 013428 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRV--YRESCIFSD-------------GTYTKD 372 (443)
Q Consensus 309 V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL--~Re~C~~~~-------------g~yiKD 372 (443)
+.++||+.+||+++. +.+.++|.|++...|++++++.+-+...++...+ ..+...... ....+-
T Consensus 73 ~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~~~ 152 (219)
T PRK09552 73 AEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGLIPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKPSL 152 (219)
T ss_pred CCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHhCCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchHHH
Confidence 678999999999998 5599999999999999999998711222332221 111111100 012234
Q ss_pred ccccCCCCCcEEEEECChhhhccCCCceeeec
Q 013428 373 LTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIE 404 (443)
Q Consensus 373 Ls~LgrDl~kVIIIDDsp~s~~~q~~NgIpI~ 404 (443)
+..++.+..++|.|.|+..-.......|+.+.
T Consensus 153 l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a 184 (219)
T PRK09552 153 IRKLSDTNDFHIVIGDSITDLEAAKQADKVFA 184 (219)
T ss_pred HHHhccCCCCEEEEeCCHHHHHHHHHCCccee
Confidence 45667778899999999987766555666443
No 91
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=95.15 E-value=0.066 Score=51.91 Aligned_cols=58 Identities=31% Similarity=0.339 Sum_probs=50.6
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHHhCC
Q 013428 270 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDP 348 (443)
Q Consensus 270 k~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~LDP 348 (443)
.+.|++||||||+.+... .+|...+.|+++. +.+.++|.|.-....+.++++.|..
T Consensus 3 ~kli~~DlDGTLl~~~~~-----------------------i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~ 59 (264)
T COG0561 3 IKLLAFDLDGTLLDSNKT-----------------------ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGL 59 (264)
T ss_pred eeEEEEcCCCCccCCCCc-----------------------cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCC
Confidence 578999999999987421 5788999999885 7899999999999999999999998
Q ss_pred CC
Q 013428 349 DG 350 (443)
Q Consensus 349 ~g 350 (443)
.+
T Consensus 60 ~~ 61 (264)
T COG0561 60 DG 61 (264)
T ss_pred Cc
Confidence 86
No 92
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=95.00 E-value=0.038 Score=50.93 Aligned_cols=106 Identities=20% Similarity=0.240 Sum_probs=56.1
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh-hccEEEEEcCCc--------------
Q 013428 271 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQ-------------- 335 (443)
Q Consensus 271 ~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Ls-k~YEIVIfTAs~-------------- 335 (443)
|.+.||||||||....... |. ....=+..+-|++-+-|+++. +.|.|||+|.-.
T Consensus 1 Kia~fD~DgTLi~~~s~~~----f~-------~~~~D~~~~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~ 69 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKK----FP-------KDPDDWKFFPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENF 69 (159)
T ss_dssp SEEEE-SCTTTEE-STSTT----S--------SSTCGGEEC-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHH
T ss_pred CEEEEeCCCCccCCCCCCc----Cc-------CCHHHhhhcchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHH
Confidence 4789999999998753211 00 001112456678999999998 579999999752
Q ss_pred HHHHHHHHHHhCCCCCeeeEEEE-cc--cceee-CCceeeccccc----CCCCCcEEEEECChh
Q 013428 336 SIYAAQLLDILDPDGKLISRRVY-RE--SCIFS-DGTYTKDLTVL----GVDLAKVAIIDNSPQ 391 (443)
Q Consensus 336 ~~YAd~VLd~LDP~g~~f~~RL~-Re--~C~~~-~g~yiKDLs~L----grDl~kVIIIDDsp~ 391 (443)
....+.+++.|+- .+ ..++ .+ .|..- .|++..-++.+ ..|+++.++|=|...
T Consensus 70 ~~ki~~il~~l~i---p~-~~~~a~~~d~~RKP~~GM~~~~~~~~~~~~~id~~~Sf~VGDaag 129 (159)
T PF08645_consen 70 HEKIENILKELGI---PI-QVYAAPHKDPCRKPNPGMWEFALKDYNDGVEIDLANSFYVGDAAG 129 (159)
T ss_dssp HHHHHHHHHHCTS----E-EEEECGCSSTTSTTSSHHHHHHCCCTSTT--S-CCC-EEEESSCH
T ss_pred HHHHHHHHHHcCC---ce-EEEecCCCCCCCCCchhHHHHHHHhccccccccccceEEEeccCC
Confidence 1233445555532 22 2222 11 22211 24443333333 358899999998653
No 93
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=94.93 E-value=0.048 Score=51.87 Aligned_cols=125 Identities=18% Similarity=0.261 Sum_probs=84.2
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh-hccEEEEEcCCc------------H
Q 013428 270 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQ------------S 336 (443)
Q Consensus 270 k~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Ls-k~YEIVIfTAs~------------~ 336 (443)
.+.|+||.||||+--.. +|. ... --..+.||+.+-|..+. ..|.+||+|.-. .
T Consensus 5 ~k~lflDRDGtin~d~~------~yv-----~~~---~~~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~ 70 (181)
T COG0241 5 QKALFLDRDGTINIDKG------DYV-----DSL---DDFQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFD 70 (181)
T ss_pred CcEEEEcCCCceecCCC------ccc-----CcH---HHhccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHH
Confidence 57999999999964321 010 000 01456899999999997 559999999833 3
Q ss_pred HHHHHHHHHhCCCCCeeeEEEEccc-----ceee---CCceeecccccCCCCCcEEEEECChhhhccCCCc---eeeecc
Q 013428 337 IYAAQLLDILDPDGKLISRRVYRES-----CIFS---DGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNN---GIPIES 405 (443)
Q Consensus 337 ~YAd~VLd~LDP~g~~f~~RL~Re~-----C~~~---~g~yiKDLs~LgrDl~kVIIIDDsp~s~~~q~~N---gIpI~s 405 (443)
.+-+.++..|--.|.-|+.+++..| |... .|.+..-+...+.|+.+.++|=|+..-..+.... ++.+..
T Consensus 71 ~~~~~m~~~l~~~gv~id~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~ 150 (181)
T COG0241 71 KLHNKMLKILASQGVKIDGILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLT 150 (181)
T ss_pred HHHHHHHHHHHHcCCccceEEECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEEc
Confidence 3444577777777777999999654 4433 3566666777889999999999997544332222 455555
Q ss_pred ccC
Q 013428 406 WFD 408 (443)
Q Consensus 406 ~~g 408 (443)
|.+
T Consensus 151 ~~~ 153 (181)
T COG0241 151 GIG 153 (181)
T ss_pred Ccc
Confidence 544
No 94
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=94.87 E-value=0.07 Score=52.42 Aligned_cols=58 Identities=21% Similarity=0.169 Sum_probs=47.0
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhh-ccEEEEEcCCcHHHHHHHHHHhCC
Q 013428 270 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDP 348 (443)
Q Consensus 270 k~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Lsk-~YEIVIfTAs~~~YAd~VLd~LDP 348 (443)
.+.+++||||||+.... ...|...+.|+++.+ .+.++|-|.-....+..+++.++.
T Consensus 4 ~kli~~DlDGTLl~~~~-----------------------~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l 60 (273)
T PRK00192 4 KLLVFTDLDGTLLDHHT-----------------------YSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGL 60 (273)
T ss_pred ceEEEEcCcccCcCCCC-----------------------cCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCC
Confidence 46899999999997421 135778899999985 599999999999999999999875
Q ss_pred CC
Q 013428 349 DG 350 (443)
Q Consensus 349 ~g 350 (443)
..
T Consensus 61 ~~ 62 (273)
T PRK00192 61 ED 62 (273)
T ss_pred CC
Confidence 53
No 95
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=94.68 E-value=0.081 Score=49.09 Aligned_cols=54 Identities=28% Similarity=0.284 Sum_probs=44.6
Q ss_pred EEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHHhCCC
Q 013428 273 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 349 (443)
Q Consensus 273 LVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~LDP~ 349 (443)
|++||||||+++... .-|...+.|+.+. +...++|.|.-....+..+++.+.-.
T Consensus 1 i~~DlDGTLl~~~~~-----------------------i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~ 55 (254)
T PF08282_consen 1 IFSDLDGTLLNSDGK-----------------------ISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGID 55 (254)
T ss_dssp EEEECCTTTCSTTSS-----------------------SCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHC
T ss_pred cEEEECCceecCCCe-----------------------eCHHHHHHHHhhcccceEEEEEccCcccccccccccccch
Confidence 689999999986421 3477888899888 77999999999999999999977644
No 96
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=94.65 E-value=0.057 Score=50.45 Aligned_cols=114 Identities=12% Similarity=0.136 Sum_probs=73.6
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEecceec-eEEEeeCchHHHHHHHh-hhccEEEEEcCCcHHHHHHHHHHhC
Q 013428 270 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEH-TVYVKQRPHLKTFLERV-AEMFEVVIFTASQSIYAAQLLDILD 347 (443)
Q Consensus 270 k~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~-~~~V~~RPgL~eFLe~L-sk~YEIVIfTAs~~~YAd~VLd~LD 347 (443)
-+.+|+|.||+|-.-+. .++.... ...+..|-+.--. .| .+.+.+.|.|+....+++.+++.+.
T Consensus 7 i~~~v~d~dGv~tdg~~------------~~~~~g~~~~~~~~~D~~~~~--~L~~~Gi~laIiT~k~~~~~~~~l~~lg 72 (169)
T TIGR02726 7 IKLVILDVDGVMTDGRI------------VINDEGIESRNFDIKDGMGVI--VLQLCGIDVAIITSKKSGAVRHRAEELK 72 (169)
T ss_pred CeEEEEeCceeeECCeE------------EEcCCCcEEEEEecchHHHHH--HHHHCCCEEEEEECCCcHHHHHHHHHCC
Confidence 57999999999966431 1111111 2334555555432 23 3679999999999999999999997
Q ss_pred CCCCeeeEEEEcccceeeCCceeecccccCCCCCcEEEEECChhhhccCCCceeeec
Q 013428 348 PDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIE 404 (443)
Q Consensus 348 P~g~~f~~RL~Re~C~~~~g~yiKDLs~LgrDl~kVIIIDDsp~s~~~q~~NgIpI~ 404 (443)
-.. +|... ......+..-+..+|.+.++++.|-|++.-...-...|+.+.
T Consensus 73 i~~-~f~~~------kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~a 122 (169)
T TIGR02726 73 IKR-FHEGI------KKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVA 122 (169)
T ss_pred CcE-EEecC------CCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEE
Confidence 763 55421 001123444556778899999999999876544444444443
No 97
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=94.50 E-value=0.011 Score=53.52 Aligned_cols=77 Identities=13% Similarity=0.104 Sum_probs=62.6
Q ss_pred EeeCchHHHHHHHhhhccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEcccceeeC---CceeecccccCCCCCcEEE
Q 013428 309 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVAI 385 (443)
Q Consensus 309 V~~RPgL~eFLe~Lsk~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~C~~~~---g~yiKDLs~LgrDl~kVII 385 (443)
+..+||+.++|+. ++|.|++...+...+++.+.... +|+..+..+.....+ ..|.+-++++|.+++++++
T Consensus 89 ~~~~~g~~~~L~~------~~i~Tn~~~~~~~~~l~~~~l~~-~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~l~ 161 (175)
T TIGR01493 89 LPPWPDSAAALAR------VAILSNASHWAFDQFAQQAGLPW-YFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRVLM 161 (175)
T ss_pred CCCCCchHHHHHH------HhhhhCCCHHHHHHHHHHCCCHH-HHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHeEe
Confidence 5579999999993 78999999999999999987654 788877766544332 3577888899999999999
Q ss_pred EECChhh
Q 013428 386 IDNSPQV 392 (443)
Q Consensus 386 IDDsp~s 392 (443)
|+|++.-
T Consensus 162 vgD~~~D 168 (175)
T TIGR01493 162 VAAHQWD 168 (175)
T ss_pred EecChhh
Confidence 9999743
No 98
>PTZ00445 p36-lilke protein; Provisional
Probab=94.46 E-value=0.047 Score=53.29 Aligned_cols=128 Identities=15% Similarity=0.173 Sum_probs=78.7
Q ss_pred CCCceEEEEecCccccccc----ccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhh-ccEEEEEcCCcHHH---
Q 013428 267 GRKSVTLVLDLDETLVHST----LEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIY--- 338 (443)
Q Consensus 267 ~~kk~tLVLDLDeTLVhS~----~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Lsk-~YEIVIfTAs~~~Y--- 338 (443)
..+-+.+++|||.|||-.- |.+. .....+.-..||.+..+++.|.+ .+.|+|-|-+.+.-
T Consensus 40 ~~GIk~Va~D~DnTlI~~HsgG~~~~~------------~~~~~~~~~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~ 107 (219)
T PTZ00445 40 ECGIKVIASDFDLTMITKHSGGYIDPD------------NDDIRVLTSVTPDFKILGKRLKNSNIKISVVTFSDKELIPS 107 (219)
T ss_pred HcCCeEEEecchhhhhhhhcccccCCC------------cchhhhhccCCHHHHHHHHHHHHCCCeEEEEEccchhhccc
Confidence 4567799999999998622 1111 01122345679999999999985 69999999988743
Q ss_pred ------------HHHHHHHhCCCCCeeeE------EEEcccceee--------CCc--e--eecccccCCCCCcEEEEEC
Q 013428 339 ------------AAQLLDILDPDGKLISR------RVYRESCIFS--------DGT--Y--TKDLTVLGVDLAKVAIIDN 388 (443)
Q Consensus 339 ------------Ad~VLd~LDP~g~~f~~------RL~Re~C~~~--------~g~--y--iKDLs~LgrDl~kVIIIDD 388 (443)
+...|+.=.-.-. +.. +++.+.-.+. .+. | .+-+++.|.+++.+++|||
T Consensus 108 ~~~~~~Isg~~li~~~lk~s~~~~~-i~~~~~yyp~~w~~p~~y~~~gl~KPdp~iK~yHle~ll~~~gl~peE~LFIDD 186 (219)
T PTZ00445 108 ENRPRYISGDRMVEAALKKSKCDFK-IKKVYAYYPKFWQEPSDYRPLGLDAPMPLDKSYHLKQVCSDFNVNPDEILFIDD 186 (219)
T ss_pred cCCcceechHHHHHHHHHhcCccce-eeeeeeeCCcccCChhhhhhhcccCCCccchHHHHHHHHHHcCCCHHHeEeecC
Confidence 3444442211111 111 1122221111 112 3 4455677999999999999
Q ss_pred ChhhhccCCCceeeecccc
Q 013428 389 SPQVFRLQVNNGIPIESWF 407 (443)
Q Consensus 389 sp~s~~~q~~NgIpI~s~~ 407 (443)
++..+.....-|+...-+.
T Consensus 187 ~~~NVeaA~~lGi~ai~f~ 205 (219)
T PTZ00445 187 DMNNCKNALKEGYIALHVT 205 (219)
T ss_pred CHHHHHHHHHCCCEEEEcC
Confidence 9998877666666655543
No 99
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=94.43 E-value=0.081 Score=50.12 Aligned_cols=94 Identities=9% Similarity=0.061 Sum_probs=61.5
Q ss_pred EEeeCchHHHHHHHhhh-ccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEcccc--eeeCC---c----------eee
Q 013428 308 YVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESC--IFSDG---T----------YTK 371 (443)
Q Consensus 308 ~V~~RPgL~eFLe~Lsk-~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~C--~~~~g---~----------yiK 371 (443)
.+.+|||+.+||+++.+ .+.++|.|++...|++++++.+.+...++..++.-..- ..... . ..+
T Consensus 68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~ 147 (214)
T TIGR03333 68 TAEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPS 147 (214)
T ss_pred cCcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHH
Confidence 37899999999999996 59999999999999999999985544344333321110 10000 0 012
Q ss_pred cccccCCCCCcEEEEECChhhhccCCCcee
Q 013428 372 DLTVLGVDLAKVAIIDNSPQVFRLQVNNGI 401 (443)
Q Consensus 372 DLs~LgrDl~kVIIIDDsp~s~~~q~~NgI 401 (443)
-+..++....++|.|-|+..-+......++
T Consensus 148 ~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~ 177 (214)
T TIGR03333 148 LIRKLSEPNDYHIVIGDSVTDVEAAKQSDL 177 (214)
T ss_pred HHHHHhhcCCcEEEEeCCHHHHHHHHhCCe
Confidence 233445567789999999876655333443
No 100
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=94.36 E-value=0.12 Score=50.75 Aligned_cols=59 Identities=19% Similarity=0.252 Sum_probs=45.6
Q ss_pred CCceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHHh
Q 013428 268 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDIL 346 (443)
Q Consensus 268 ~kk~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~L 346 (443)
+.++.+++||||||++.... .-|-..+-|+++. +...++|.|.-....+.++++.|
T Consensus 5 ~~~~lI~~DlDGTLL~~~~~-----------------------i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l 61 (271)
T PRK03669 5 QDPLLIFTDLDGTLLDSHTY-----------------------DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTL 61 (271)
T ss_pred CCCeEEEEeCccCCcCCCCc-----------------------CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHh
Confidence 44679999999999975211 1244567788887 56999999999999999999998
Q ss_pred CCC
Q 013428 347 DPD 349 (443)
Q Consensus 347 DP~ 349 (443)
+..
T Consensus 62 ~~~ 64 (271)
T PRK03669 62 GLQ 64 (271)
T ss_pred CCC
Confidence 764
No 101
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=94.18 E-value=0.091 Score=44.79 Aligned_cols=50 Identities=24% Similarity=0.267 Sum_probs=36.0
Q ss_pred EEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhh-ccEEEEEcCCcHHHHHHHHHHh
Q 013428 273 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDIL 346 (443)
Q Consensus 273 LVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Lsk-~YEIVIfTAs~~~YAd~VLd~L 346 (443)
++||+||||.+-. ..=||+.+||++|.+ ...+++.|.+...-...+.++|
T Consensus 1 ~l~D~dGvl~~g~------------------------~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L 51 (101)
T PF13344_consen 1 FLFDLDGVLYNGN------------------------EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKL 51 (101)
T ss_dssp EEEESTTTSEETT------------------------EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHH
T ss_pred CEEeCccEeEeCC------------------------CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHH
Confidence 5799999998642 124999999999995 5999999999855444444444
No 102
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=94.15 E-value=0.14 Score=48.31 Aligned_cols=57 Identities=16% Similarity=0.229 Sum_probs=46.2
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHHhCCC
Q 013428 271 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 349 (443)
Q Consensus 271 ~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~LDP~ 349 (443)
+.+++||||||+.... .+-|...+-|+++. +.+.+++.|.-....+.++++.|+..
T Consensus 2 k~v~~DlDGTLl~~~~-----------------------~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~ 58 (215)
T TIGR01487 2 KLVAIDIDGTLTEPNR-----------------------MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTS 58 (215)
T ss_pred cEEEEecCCCcCCCCc-----------------------ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCC
Confidence 4789999999985321 24577888899998 45999999999999999999999876
Q ss_pred C
Q 013428 350 G 350 (443)
Q Consensus 350 g 350 (443)
+
T Consensus 59 ~ 59 (215)
T TIGR01487 59 G 59 (215)
T ss_pred C
Confidence 4
No 103
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=94.06 E-value=0.07 Score=50.33 Aligned_cols=116 Identities=20% Similarity=0.265 Sum_probs=81.8
Q ss_pred CccCCCCceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhh-ccEEEEEcCCcHHHHHH
Q 013428 263 KETQGRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQ 341 (443)
Q Consensus 263 ~~~~~~kk~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Lsk-~YEIVIfTAs~~~YAd~ 341 (443)
..-..++-+.+|+|||+|||- |... ..-|-+.+.+..+.. ...++|.+...+.-+..
T Consensus 21 ~~L~~~Gikgvi~DlDNTLv~--wd~~--------------------~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~ 78 (175)
T COG2179 21 DILKAHGIKGVILDLDNTLVP--WDNP--------------------DATPELRAWLAELKEAGIKVVVVSNNKESRVAR 78 (175)
T ss_pred HHHHHcCCcEEEEeccCceec--ccCC--------------------CCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHh
Confidence 333457788999999999985 3221 125889999999995 59999999999999999
Q ss_pred HHHHhCCCCCeeeEEEEcccceeeCCceeecccccCCCCCcEEEEECChh--hhccCCCc--eeeecccc
Q 013428 342 LLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQ--VFRLQVNN--GIPIESWF 407 (443)
Q Consensus 342 VLd~LDP~g~~f~~RL~Re~C~~~~g~yiKDLs~LgrDl~kVIIIDDsp~--s~~~q~~N--gIpI~s~~ 407 (443)
++..||-.. + ++-- .-....+.|-|..++.+.++|+.|-|... +...+... .|.|+|-.
T Consensus 79 ~~~~l~v~f--i----~~A~-KP~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~tIlV~Pl~ 141 (175)
T COG2179 79 AAEKLGVPF--I----YRAK-KPFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTILVEPLV 141 (175)
T ss_pred hhhhcCCce--e----eccc-CccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEEEEEEEec
Confidence 999998763 1 1100 00122456778888999999999999874 44444322 35566653
No 104
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=93.91 E-value=0.16 Score=49.25 Aligned_cols=57 Identities=19% Similarity=0.211 Sum_probs=45.1
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHHhCC
Q 013428 270 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDP 348 (443)
Q Consensus 270 k~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~LDP 348 (443)
.+.+++||||||++... .+-|...+.|+++. +.+.++|-|.-....+.++++.|..
T Consensus 3 ~kli~~DlDGTLl~~~~-----------------------~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~ 59 (270)
T PRK10513 3 IKLIAIDMDGTLLLPDH-----------------------TISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHM 59 (270)
T ss_pred eEEEEEecCCcCcCCCC-----------------------ccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCC
Confidence 46899999999997531 12455678888888 5589999999999999999998876
Q ss_pred C
Q 013428 349 D 349 (443)
Q Consensus 349 ~ 349 (443)
.
T Consensus 60 ~ 60 (270)
T PRK10513 60 E 60 (270)
T ss_pred C
Confidence 4
No 105
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=93.81 E-value=0.14 Score=51.62 Aligned_cols=105 Identities=18% Similarity=0.283 Sum_probs=67.8
Q ss_pred EEeeCchHHHHHHHhhh-ccEEEEEcCCcHHHHHHHHHHhCC---CCCeeeEEEEcccceeeCC-------ceee-----
Q 013428 308 YVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDP---DGKLISRRVYRESCIFSDG-------TYTK----- 371 (443)
Q Consensus 308 ~V~~RPgL~eFLe~Lsk-~YEIVIfTAs~~~YAd~VLd~LDP---~g~~f~~RL~Re~C~~~~g-------~yiK----- 371 (443)
-+.+|||+.+||++|.+ .+.++|+|+|...+++.+++.+.- ....++.++--.......| .+-|
T Consensus 119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v~ 198 (277)
T TIGR01544 119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDVA 198 (277)
T ss_pred CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHHH
Confidence 37899999999999985 599999999999999999998654 3345556654321111111 1122
Q ss_pred --cccccC--CCCCcEEEEECChhhhcc-----CCCceeeeccccCCCCch
Q 013428 372 --DLTVLG--VDLAKVAIIDNSPQVFRL-----QVNNGIPIESWFDDPSDC 413 (443)
Q Consensus 372 --DLs~Lg--rDl~kVIIIDDsp~s~~~-----q~~NgIpI~s~~gd~~D~ 413 (443)
..+.++ .+.+++|+|-|+..-..+ +.+|.|.| .|..+.-+.
T Consensus 199 ~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~i-gfln~~~e~ 248 (277)
T TIGR01544 199 LRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKI-GYLNDRVDE 248 (277)
T ss_pred HHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEE-EecccCHHH
Confidence 122345 678899999999975432 33455555 343443333
No 106
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=93.76 E-value=0.17 Score=48.85 Aligned_cols=53 Identities=19% Similarity=0.256 Sum_probs=42.5
Q ss_pred EEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhh-ccEEEEEcCCcHHHHHHHHHHhCCC
Q 013428 273 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPD 349 (443)
Q Consensus 273 LVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Lsk-~YEIVIfTAs~~~YAd~VLd~LDP~ 349 (443)
+++||||||++... .-|...++|+++.+ ...+++.|.-....+..+++.+...
T Consensus 2 i~~DlDGTLl~~~~------------------------~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 2 IFTDLDGTLLPPGY------------------------EPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred EEEeCCCCCcCCCC------------------------CchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 68999999998421 13568899999985 5999999999888888888888754
No 107
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=93.74 E-value=0.21 Score=48.22 Aligned_cols=58 Identities=24% Similarity=0.295 Sum_probs=41.1
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHHhCC
Q 013428 270 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDP 348 (443)
Q Consensus 270 k~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~LDP 348 (443)
.+.+++||||||+.... .+-|...+-|+++. +...++|-|.-....+..+++.|..
T Consensus 3 ~kli~~DlDGTLl~~~~-----------------------~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~ 59 (272)
T PRK10530 3 YRVIALDLDGTLLTPKK-----------------------TILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALAL 59 (272)
T ss_pred ccEEEEeCCCceECCCC-----------------------ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCC
Confidence 35899999999997531 12344566677776 4578888888777777778777765
Q ss_pred CC
Q 013428 349 DG 350 (443)
Q Consensus 349 ~g 350 (443)
.+
T Consensus 60 ~~ 61 (272)
T PRK10530 60 DT 61 (272)
T ss_pred CC
Confidence 53
No 108
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=93.51 E-value=0.26 Score=46.47 Aligned_cols=57 Identities=12% Similarity=0.222 Sum_probs=45.0
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHHhCCC
Q 013428 271 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 349 (443)
Q Consensus 271 ~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~LDP~ 349 (443)
+.+++||||||+.... .+.|...+-|+++. +...++|-|.-....+.++++.+...
T Consensus 4 kli~~DlDGTLl~~~~-----------------------~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 60 (230)
T PRK01158 4 KAIAIDIDGTITDKDR-----------------------RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTS 60 (230)
T ss_pred eEEEEecCCCcCCCCC-----------------------ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCC
Confidence 6889999999996421 13567778888888 45899999999888888898888765
Q ss_pred C
Q 013428 350 G 350 (443)
Q Consensus 350 g 350 (443)
+
T Consensus 61 ~ 61 (230)
T PRK01158 61 G 61 (230)
T ss_pred C
Confidence 4
No 109
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=93.35 E-value=0.19 Score=48.58 Aligned_cols=55 Identities=25% Similarity=0.320 Sum_probs=42.9
Q ss_pred EEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHHhCCC
Q 013428 272 TLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 349 (443)
Q Consensus 272 tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~LDP~ 349 (443)
.+++||||||+.... ...|...+.|+++. +.+.++|-|.-....+..+++.+...
T Consensus 1 li~~DlDGTLl~~~~-----------------------~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~ 56 (256)
T TIGR00099 1 LIFIDLDGTLLNDDH-----------------------TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLD 56 (256)
T ss_pred CEEEeCCCCCCCCCC-----------------------ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 378999999997521 13466778888888 45899999999988888888888765
No 110
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=93.33 E-value=0.23 Score=46.72 Aligned_cols=54 Identities=24% Similarity=0.256 Sum_probs=42.8
Q ss_pred EEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhh-ccEEEEEcCCcHHHHHHHHHHhCCC
Q 013428 273 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPD 349 (443)
Q Consensus 273 LVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Lsk-~YEIVIfTAs~~~YAd~VLd~LDP~ 349 (443)
+++||||||+++... .-|-..+.|+.+.+ ...++|.|.-....+.++++.+...
T Consensus 2 i~~DlDGTLL~~~~~-----------------------~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 2 VFSDLDGTLLDSHSY-----------------------DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred EEEeCCCCCcCCCCC-----------------------CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 789999999975310 12236788999884 5899999999999999999998754
No 111
>PRK10976 putative hydrolase; Provisional
Probab=93.17 E-value=0.25 Score=47.84 Aligned_cols=57 Identities=23% Similarity=0.246 Sum_probs=40.0
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHHhCCC
Q 013428 271 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 349 (443)
Q Consensus 271 ~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~LDP~ 349 (443)
+.+++||||||++... .+-|...+-|+++. +...++|-|.-....+.++++.|+..
T Consensus 3 kli~~DlDGTLl~~~~-----------------------~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 59 (266)
T PRK10976 3 QVVASDLDGTLLSPDH-----------------------TLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIK 59 (266)
T ss_pred eEEEEeCCCCCcCCCC-----------------------cCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCC
Confidence 5899999999997631 12344556677766 45778888877777777777777654
Q ss_pred C
Q 013428 350 G 350 (443)
Q Consensus 350 g 350 (443)
+
T Consensus 60 ~ 60 (266)
T PRK10976 60 S 60 (266)
T ss_pred C
Confidence 3
No 112
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=93.13 E-value=0.26 Score=48.13 Aligned_cols=57 Identities=18% Similarity=0.201 Sum_probs=41.2
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHHhCCC
Q 013428 271 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 349 (443)
Q Consensus 271 ~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~LDP~ 349 (443)
+.+++||||||+.... .+-|...+-|+++. +...+++-|.-....+.++++.++..
T Consensus 3 kli~~DlDGTLl~~~~-----------------------~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 59 (272)
T PRK15126 3 RLAAFDMDGTLLMPDH-----------------------HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLD 59 (272)
T ss_pred cEEEEeCCCcCcCCCC-----------------------cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCC
Confidence 5889999999997531 12455666777777 45788888888878888888877665
Q ss_pred C
Q 013428 350 G 350 (443)
Q Consensus 350 g 350 (443)
+
T Consensus 60 ~ 60 (272)
T PRK15126 60 A 60 (272)
T ss_pred C
Confidence 3
No 113
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=93.09 E-value=0.3 Score=45.92 Aligned_cols=96 Identities=20% Similarity=0.285 Sum_probs=64.0
Q ss_pred CCCCceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhhcc---EEEEEcCC-------c
Q 013428 266 QGRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMF---EVVIFTAS-------Q 335 (443)
Q Consensus 266 ~~~kk~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Lsk~Y---EIVIfTAs-------~ 335 (443)
+..+-+.||||+|+||+.-.. -..-|.+.+.++++.+.| .|+|+|.+ .
T Consensus 37 k~~Gik~li~DkDNTL~~~~~----------------------~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~ 94 (168)
T PF09419_consen 37 KKKGIKALIFDKDNTLTPPYE----------------------DEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPD 94 (168)
T ss_pred hhcCceEEEEcCCCCCCCCCc----------------------CcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCcc
Confidence 456778999999999975321 124678889999999765 39999998 3
Q ss_pred HHHHHHHHHHhCCCCCeeeEEEEcccceeeCCceeecccccC-----CCCCcEEEEECChh
Q 013428 336 SIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLG-----VDLAKVAIIDNSPQ 391 (443)
Q Consensus 336 ~~YAd~VLd~LDP~g~~f~~RL~Re~C~~~~g~yiKDLs~Lg-----rDl~kVIIIDDsp~ 391 (443)
..-|+.+-+.|... .+.|+-- ..+.+-+-++.++ ..++++++|-|+..
T Consensus 95 ~~~a~~~~~~lgIp--vl~h~~k------KP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~ 147 (168)
T PF09419_consen 95 GERAEALEKALGIP--VLRHRAK------KPGCFREILKYFKCQKVVTSPSEIAVIGDRLF 147 (168)
T ss_pred HHHHHHHHHhhCCc--EEEeCCC------CCccHHHHHHHHhhccCCCCchhEEEEcchHH
Confidence 67777888887743 2333211 2233333333332 35889999999873
No 114
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=92.25 E-value=0.033 Score=54.53 Aligned_cols=98 Identities=16% Similarity=0.130 Sum_probs=71.9
Q ss_pred EEeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHHhC-CCCCeeeEEEEcccceee-----CCceeecccccCCCC
Q 013428 308 YVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILD-PDGKLISRRVYRESCIFS-----DGTYTKDLTVLGVDL 380 (443)
Q Consensus 308 ~V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~LD-P~g~~f~~RL~Re~C~~~-----~g~yiKDLs~LgrDl 380 (443)
.++.=||+..++..|. ..-.+.++|.+.+..++..+..+. +-. .|++...-+.-... ...|.+-+++||...
T Consensus 90 ~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~-~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~~~~ 168 (222)
T KOG2914|consen 90 NSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFK-NFSHVVLGDDPEVKNGKPDPDIYLKAAKRLGVPP 168 (222)
T ss_pred ccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHH-hcCCCeecCCccccCCCCCchHHHHHHHhcCCCC
Confidence 4788899999999999 458999999999998888887765 333 56665552221222 246788899999988
Q ss_pred -CcEEEEECChhhhccCCCceeeeccc
Q 013428 381 -AKVAIIDNSPQVFRLQVNNGIPIESW 406 (443)
Q Consensus 381 -~kVIIIDDsp~s~~~q~~NgIpI~s~ 406 (443)
+++++++|++........-|.++...
T Consensus 169 ~~k~lVfeds~~Gv~aa~aagm~vi~v 195 (222)
T KOG2914|consen 169 PSKCLVFEDSPVGVQAAKAAGMQVVGV 195 (222)
T ss_pred ccceEEECCCHHHHHHHHhcCCeEEEe
Confidence 99999999998775544444444333
No 115
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=92.17 E-value=0.33 Score=47.06 Aligned_cols=55 Identities=25% Similarity=0.198 Sum_probs=43.2
Q ss_pred EEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhh-ccEEEEEcCCcHHHHHHHHHHhCCC
Q 013428 272 TLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPD 349 (443)
Q Consensus 272 tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Lsk-~YEIVIfTAs~~~YAd~VLd~LDP~ 349 (443)
.+++||||||++.... ..+...++++++.+ ...+++-|.-....+..+++.++..
T Consensus 1 li~~DlDGTll~~~~~-----------------------~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~ 56 (256)
T TIGR01486 1 WIFTDLDGTLLDPHGY-----------------------DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLE 56 (256)
T ss_pred CEEEcCCCCCcCCCCc-----------------------CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 3789999999976310 12357889999985 4899999998999999999998753
No 116
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=92.12 E-value=0.36 Score=44.33 Aligned_cols=62 Identities=15% Similarity=0.218 Sum_probs=41.6
Q ss_pred EEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh-hccEEEEEcCCcHHHHH---HHHHHh
Q 013428 273 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAA---QLLDIL 346 (443)
Q Consensus 273 LVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd---~VLd~L 346 (443)
+++|+||||+.+..... ... ..... +..|++.++++++. +.|.+++.|+.....+. +.+..+
T Consensus 2 VisDIDGTL~~sd~~~~-----~~~----~~~~~---~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~ 67 (157)
T smart00775 2 VISDIDGTITKSDVLGH-----VVP----IIGKD---WTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQI 67 (157)
T ss_pred EEEecCCCCcccccccc-----ccc----ccccC---cCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHh
Confidence 78999999998741110 000 00011 34799999999999 56899998988877664 566554
No 117
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=92.10 E-value=0.45 Score=42.67 Aligned_cols=49 Identities=16% Similarity=0.331 Sum_probs=41.4
Q ss_pred EeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEE
Q 013428 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVY 358 (443)
Q Consensus 309 V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~ 358 (443)
+..|||+.++|+.+. +.+.++|.|++...|++++++.+.... +|..++.
T Consensus 72 ~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~-~~~~~~~ 121 (177)
T TIGR01488 72 VALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDD-VFANRLE 121 (177)
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCch-heeeeEE
Confidence 567999999999997 559999999999999999999987653 5665554
No 118
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=91.92 E-value=0.11 Score=50.14 Aligned_cols=89 Identities=10% Similarity=0.113 Sum_probs=62.8
Q ss_pred EeeCchHHHHHHHhhhccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEcccceeeC---CceeecccccCCCCCcEEE
Q 013428 309 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVAI 385 (443)
Q Consensus 309 V~~RPgL~eFLe~Lsk~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~C~~~~---g~yiKDLs~LgrDl~kVII 385 (443)
+..-||+.++|+.|++.|.++|.|++... ++.++.. .+|+..+..+.....+ ..|.+-+..+|.+++++++
T Consensus 112 ~~~~~gv~~~L~~L~~~~~l~i~Tn~~~~-----~~~~gl~-~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~ 185 (238)
T PRK10748 112 IDVPQATHDTLKQLAKKWPLVAITNGNAQ-----PELFGLG-DYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEILH 185 (238)
T ss_pred CCCCccHHHHHHHHHcCCCEEEEECCCch-----HHHCCcH-HhhceeEecccCCcCCCcHHHHHHHHHHcCCChhHEEE
Confidence 44558999999999988999999998765 2444433 4788777655433222 2466667888999999999
Q ss_pred EECCh-hhhccCCCceeee
Q 013428 386 IDNSP-QVFRLQVNNGIPI 403 (443)
Q Consensus 386 IDDsp-~s~~~q~~NgIpI 403 (443)
|.|++ .-......+|+..
T Consensus 186 VGD~~~~Di~~A~~aG~~~ 204 (238)
T PRK10748 186 VGDDLTTDVAGAIRCGMQA 204 (238)
T ss_pred EcCCcHHHHHHHHHCCCeE
Confidence 98884 5454444566654
No 119
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=91.77 E-value=0.37 Score=44.69 Aligned_cols=54 Identities=31% Similarity=0.375 Sum_probs=43.1
Q ss_pred EEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhhc-cEEEEEcCCcHHHHHHHHHHhC
Q 013428 272 TLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDILD 347 (443)
Q Consensus 272 tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Lsk~-YEIVIfTAs~~~YAd~VLd~LD 347 (443)
.|++|+||||+.... ....|.+.+.|++|.+. ..++|.|.....++..+++.++
T Consensus 1 li~~D~DgTL~~~~~----------------------~~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 1 LLFFDLDGTLLDPNA----------------------HELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred CEEEeCcCCCcCCCC----------------------CcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 378999999997420 12358889999999865 8999999999999999998753
No 120
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=91.71 E-value=0.39 Score=52.04 Aligned_cols=127 Identities=18% Similarity=0.221 Sum_probs=70.7
Q ss_pred CCCceEEEEecCcccccccccccCCCCceEEEEecc-eeceEEEeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHH
Q 013428 267 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNM-KEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLD 344 (443)
Q Consensus 267 ~~kk~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~-~~~~~~V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd 344 (443)
+..++.||||||+|| |...-..|=.-.+.... ....-| --+++|...+. +.+=+.|.|-....-|..+..
T Consensus 219 g~~kK~LVLDLDNTL----WGGVIGedGv~GI~Ls~~~~G~~f----k~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~ 290 (574)
T COG3882 219 GKSKKALVLDLDNTL----WGGVIGEDGVDGIRLSNSAEGEAF----KTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFR 290 (574)
T ss_pred CcccceEEEecCCcc----cccccccccccceeecCCCCchhH----HHHHHHHHHHHhccEEEEEecCCchhhHHHHHh
Confidence 456789999999999 44332222111111110 000000 01345555555 557777888888888887765
Q ss_pred HhCCCCCeeeEEEEccc-----ceeeC--CceeecccccCCCCCcEEEEECChhhhccCCCce-eeecccc
Q 013428 345 ILDPDGKLISRRVYRES-----CIFSD--GTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNG-IPIESWF 407 (443)
Q Consensus 345 ~LDP~g~~f~~RL~Re~-----C~~~~--g~yiKDLs~LgrDl~kVIIIDDsp~s~~~q~~Ng-IpI~s~~ 407 (443)
+- |+ ..|--++ |.+.+ .+..|-..+|+-.+.-+|+|||+|.....-..++ |.+..+-
T Consensus 291 kh-p~-----MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~dSmvFiDD~p~ErE~vk~~~~v~Vi~~~ 355 (574)
T COG3882 291 KH-PD-----MILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDSMVFIDDNPAERELVKRELPVSVIEFP 355 (574)
T ss_pred hC-CC-----eEeeHhhhhhheecCCcchhhHHHHHHHhCCCccceEEecCCHHHHHHHHhcCceeeccCC
Confidence 42 11 1222222 22221 2445677788999999999999997664433333 5555553
No 121
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=91.40 E-value=0.52 Score=44.14 Aligned_cols=53 Identities=17% Similarity=0.236 Sum_probs=39.9
Q ss_pred EEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHHhCC
Q 013428 273 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDP 348 (443)
Q Consensus 273 LVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~LDP 348 (443)
+++||||||+++.. .+.|-..+-|+++. +...+++-|.-....+.++++.|..
T Consensus 1 i~~DlDGTLl~~~~-----------------------~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~ 54 (225)
T TIGR01482 1 IASDIDGTLTDPNR-----------------------AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGT 54 (225)
T ss_pred CeEeccCccCCCCc-----------------------ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCC
Confidence 58999999997531 12455667777777 4588999998888888888888873
No 122
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=91.38 E-value=0.33 Score=49.30 Aligned_cols=53 Identities=17% Similarity=0.265 Sum_probs=41.1
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhh-----ccEEEEEcCCc----HHHHHH
Q 013428 271 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-----MFEVVIFTASQ----SIYAAQ 341 (443)
Q Consensus 271 ~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Lsk-----~YEIVIfTAs~----~~YAd~ 341 (443)
+.++||+||||+++. ..-|++.+||+.+.. ...++++|... +.+++.
T Consensus 1 ~~~ifD~DGvL~~g~------------------------~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~ 56 (321)
T TIGR01456 1 FGFAFDIDGVLFRGK------------------------KPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEE 56 (321)
T ss_pred CEEEEeCcCceECCc------------------------cccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHH
Confidence 368999999998873 125899999999996 78889999774 567777
Q ss_pred HHHHhC
Q 013428 342 LLDILD 347 (443)
Q Consensus 342 VLd~LD 347 (443)
+.+.+.
T Consensus 57 l~~~lG 62 (321)
T TIGR01456 57 ISSLLG 62 (321)
T ss_pred HHHHcC
Confidence 756554
No 123
>PRK10444 UMP phosphatase; Provisional
Probab=91.05 E-value=0.3 Score=48.02 Aligned_cols=54 Identities=22% Similarity=0.369 Sum_probs=42.0
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhh-ccEEEEEcCCcHHHHHHHHHHhCC
Q 013428 271 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDP 348 (443)
Q Consensus 271 ~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Lsk-~YEIVIfTAs~~~YAd~VLd~LDP 348 (443)
+.+++||||||++.. ..=||..+||+++.+ ...+++.|.....-+..+.+.|.-
T Consensus 2 ~~v~~DlDGtL~~~~------------------------~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~ 56 (248)
T PRK10444 2 KNVICDIDGVLMHDN------------------------VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFAT 56 (248)
T ss_pred cEEEEeCCCceEeCC------------------------eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH
Confidence 378999999998762 124899999999984 689999999887766666666643
No 124
>PTZ00174 phosphomannomutase; Provisional
Probab=90.66 E-value=0.65 Score=45.15 Aligned_cols=52 Identities=19% Similarity=0.253 Sum_probs=36.6
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHH
Q 013428 270 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLD 344 (443)
Q Consensus 270 k~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd 344 (443)
.+.+++||||||+++.. .+-|...+-|+++. +...++|-|.-...-+.+.+.
T Consensus 5 ~klia~DlDGTLL~~~~-----------------------~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l~ 57 (247)
T PTZ00174 5 KTILLFDVDGTLTKPRN-----------------------PITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQLG 57 (247)
T ss_pred CeEEEEECcCCCcCCCC-----------------------CCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHh
Confidence 46899999999998742 12456677788887 458888888866554444443
No 125
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=90.61 E-value=0.38 Score=47.47 Aligned_cols=49 Identities=18% Similarity=0.326 Sum_probs=41.1
Q ss_pred EeeCchHHHHHHHhh---hccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEE
Q 013428 309 VKQRPHLKTFLERVA---EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVY 358 (443)
Q Consensus 309 V~~RPgL~eFLe~Ls---k~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~ 358 (443)
+..-||+.+|+++++ ..++++|-|-|..-|.+.||+.-+..+ +|+.++.
T Consensus 70 ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~-~f~~I~T 121 (234)
T PF06888_consen 70 IPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRD-CFSEIFT 121 (234)
T ss_pred CCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCcc-ccceEEe
Confidence 778999999999995 379999999999999999999987764 4544433
No 126
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=90.41 E-value=0.74 Score=47.18 Aligned_cols=57 Identities=12% Similarity=0.168 Sum_probs=43.4
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHHhCCC
Q 013428 271 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 349 (443)
Q Consensus 271 ~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~LDP~ 349 (443)
+.+++||||||+..... .-+-..+-|++|. +...+|+.|+-+..-...+.+.|...
T Consensus 2 KLIftDLDGTLLd~~~~-----------------------~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 2 RLVLSSLDGSLLDLEFN-----------------------SYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE 58 (302)
T ss_pred cEEEEeCCCCCcCCCCc-----------------------CCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 58899999999975311 1234677788888 55899999998888888888888765
Q ss_pred C
Q 013428 350 G 350 (443)
Q Consensus 350 g 350 (443)
.
T Consensus 59 ~ 59 (302)
T PRK12702 59 H 59 (302)
T ss_pred C
Confidence 4
No 127
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=90.34 E-value=0.35 Score=47.60 Aligned_cols=47 Identities=17% Similarity=0.148 Sum_probs=34.5
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhh-ccEEEEEcCCcHH
Q 013428 271 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSI 337 (443)
Q Consensus 271 ~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Lsk-~YEIVIfTAs~~~ 337 (443)
++++|||||||++..... =..=|+..++|+++.+ ...+++.|.....
T Consensus 2 k~i~~D~DGtl~~~~~~~--------------------~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~ 49 (257)
T TIGR01458 2 KGVLLDISGVLYISDAKS--------------------GVAVPGSQEAVKRLRGASVKVRFVTNTTKE 49 (257)
T ss_pred CEEEEeCCCeEEeCCCcc--------------------cCcCCCHHHHHHHHHHCCCeEEEEECCCCC
Confidence 378999999998753100 0025899999999994 5999999976544
No 128
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=90.14 E-value=0.41 Score=44.14 Aligned_cols=86 Identities=23% Similarity=0.282 Sum_probs=57.6
Q ss_pred EeeCchHHHHHHHhhh-ccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEc-ccceee---CCc----------eeecc
Q 013428 309 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYR-ESCIFS---DGT----------YTKDL 373 (443)
Q Consensus 309 V~~RPgL~eFLe~Lsk-~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~R-e~C~~~---~g~----------yiKDL 373 (443)
...+|++.++|+++.+ .+.++|-|++...+++.+++.++-.. +|..++.. ++=.+. .|. ...-+
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~-~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~ 164 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDN-AIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAELL 164 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcc-eEecceEEcCCCEEeCCccCCCCCChHHHHHHHHHH
Confidence 3579999999999984 69999999999999999999998765 66654432 110111 000 00112
Q ss_pred cccCCCCCcEEEEECChhhhcc
Q 013428 374 TVLGVDLAKVAIIDNSPQVFRL 395 (443)
Q Consensus 374 s~LgrDl~kVIIIDDsp~s~~~ 395 (443)
...+.++++++.+-|++.-...
T Consensus 165 ~~~~~~~~~~~~~gDs~~D~~~ 186 (202)
T TIGR01490 165 AEEQIDLKDSYAYGDSISDLPL 186 (202)
T ss_pred HHcCCCHHHcEeeeCCcccHHH
Confidence 2346677778888887765433
No 129
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=90.04 E-value=0.36 Score=47.92 Aligned_cols=101 Identities=17% Similarity=0.173 Sum_probs=67.5
Q ss_pred EEeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEccc---------------ceeeCCc---
Q 013428 308 YVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRES---------------CIFSDGT--- 368 (443)
Q Consensus 308 ~V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~---------------C~~~~g~--- 368 (443)
+...=|.+-+|++.+. +..-++..|+....|...-++.|---|--|+...+++. -.+.+|.
T Consensus 79 ~~lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft 158 (252)
T PF11019_consen 79 MELIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFT 158 (252)
T ss_pred eEEcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEEe
Confidence 3556789999999999 66999999999999999888877544433333321111 1122231
Q ss_pred --------eeecccccCCCCCcEEEEECChhhh----ccCCCceeeeccccC
Q 013428 369 --------YTKDLTVLGVDLAKVAIIDNSPQVF----RLQVNNGIPIESWFD 408 (443)
Q Consensus 369 --------yiKDLs~LgrDl~kVIIIDDsp~s~----~~q~~NgIpI~s~~g 408 (443)
...=|..+|..++++|+|||+.... ..-...+|..-.++-
T Consensus 159 ~~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Y 210 (252)
T PF11019_consen 159 GGQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHY 210 (252)
T ss_pred CCCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEE
Confidence 1222456799999999999999755 122337777777753
No 130
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=89.66 E-value=0.79 Score=45.44 Aligned_cols=59 Identities=15% Similarity=0.075 Sum_probs=41.1
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhh--ccEEEEEcCCcHHHHHHHHHHh
Q 013428 270 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE--MFEVVIFTASQSIYAAQLLDIL 346 (443)
Q Consensus 270 k~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Lsk--~YEIVIfTAs~~~YAd~VLd~L 346 (443)
+..|++|+||||+.....+.. ...-|.+.+-|+.|++ ...++|.|.-...-+..+++.+
T Consensus 14 ~~li~~D~DGTLl~~~~~p~~------------------~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~ 74 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKPHPDQ------------------VVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPY 74 (266)
T ss_pred CEEEEEecCCCCCCCCCCccc------------------ccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcc
Confidence 579999999999975422211 1224778888888875 4678888887777777666544
No 131
>PLN02645 phosphoglycolate phosphatase
Probab=89.56 E-value=0.43 Score=48.22 Aligned_cols=53 Identities=15% Similarity=0.100 Sum_probs=39.3
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHHh
Q 013428 270 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDIL 346 (443)
Q Consensus 270 k~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~L 346 (443)
-+.++||+||||++.. .+ =||+.++|+++. +...+++.|+....-...+++.|
T Consensus 28 ~~~~~~D~DGtl~~~~----------------------~~--~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l 81 (311)
T PLN02645 28 VETFIFDCDGVIWKGD----------------------KL--IEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKF 81 (311)
T ss_pred CCEEEEeCcCCeEeCC----------------------cc--CcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHH
Confidence 4589999999997642 01 289999999998 57999999998755444444443
No 132
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=89.06 E-value=0.64 Score=46.03 Aligned_cols=41 Identities=20% Similarity=0.265 Sum_probs=32.3
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhh-ccEEEEEcCCc
Q 013428 271 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQ 335 (443)
Q Consensus 271 ~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Lsk-~YEIVIfTAs~ 335 (443)
..+++|+||||++.. ..-||+.++|+++.+ ...+++.|+..
T Consensus 3 ~~~~~D~DGtl~~~~------------------------~~~~ga~e~l~~L~~~g~~~~~~Tnns 44 (279)
T TIGR01452 3 QGFIFDCDGVLWLGE------------------------RVVPGAPELLDRLARAGKAALFVTNNS 44 (279)
T ss_pred cEEEEeCCCceEcCC------------------------eeCcCHHHHHHHHHHCCCeEEEEeCCC
Confidence 478999999997642 124789999999984 58999999854
No 133
>PLN02423 phosphomannomutase
Probab=88.59 E-value=1.1 Score=43.86 Aligned_cols=55 Identities=18% Similarity=0.338 Sum_probs=36.1
Q ss_pred CCceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhhccEEEEEcCCcHHHHHHHHHHhC
Q 013428 268 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILD 347 (443)
Q Consensus 268 ~kk~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Lsk~YEIVIfTAs~~~YAd~VLd~LD 347 (443)
+.+..+++||||||+.+.. .+-|...+-|++|.+...+++.|.- .| ..+.+.+.
T Consensus 5 ~~~~i~~~D~DGTLl~~~~-----------------------~i~~~~~~ai~~l~~~i~fviaTGR--~~-~~~~~~~~ 58 (245)
T PLN02423 5 KPGVIALFDVDGTLTAPRK-----------------------EATPEMLEFMKELRKVVTVGVVGGS--DL-SKISEQLG 58 (245)
T ss_pred ccceEEEEeccCCCcCCCC-----------------------cCCHHHHHHHHHHHhCCEEEEECCc--CH-HHHHHHhc
Confidence 3445666999999997631 1246677888999877777777765 33 24445554
Q ss_pred C
Q 013428 348 P 348 (443)
Q Consensus 348 P 348 (443)
+
T Consensus 59 ~ 59 (245)
T PLN02423 59 K 59 (245)
T ss_pred c
Confidence 4
No 134
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=88.28 E-value=1.6 Score=49.29 Aligned_cols=60 Identities=18% Similarity=0.132 Sum_probs=45.9
Q ss_pred CCCceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHH
Q 013428 267 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDI 345 (443)
Q Consensus 267 ~~kk~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~ 345 (443)
..+++.+++||||||++... ++. +...+-|+.+. +...+++.|.-....+..+++.
T Consensus 413 ~~~~KLIfsDLDGTLLd~d~---------------------~i~--~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~ 469 (694)
T PRK14502 413 GQFKKIVYTDLDGTLLNPLT---------------------YSY--STALDALRLLKDKELPLVFCSAKTMGEQDLYRNE 469 (694)
T ss_pred CceeeEEEEECcCCCcCCCC---------------------ccC--HHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHH
Confidence 56788999999999998631 111 23456677777 5689999999999999999999
Q ss_pred hCCC
Q 013428 346 LDPD 349 (443)
Q Consensus 346 LDP~ 349 (443)
|+..
T Consensus 470 Lgl~ 473 (694)
T PRK14502 470 LGIK 473 (694)
T ss_pred cCCC
Confidence 8754
No 135
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=87.84 E-value=1.1 Score=43.45 Aligned_cols=60 Identities=25% Similarity=0.081 Sum_probs=39.7
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhhcc-EEEEEcCCcHHHHHHHHHHhCC
Q 013428 270 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMF-EVVIFTASQSIYAAQLLDILDP 348 (443)
Q Consensus 270 k~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Lsk~Y-EIVIfTAs~~~YAd~VLd~LDP 348 (443)
++.++.||||||+.+.... -...|.+.+.++++.+.. .+|+-|.-+..-+.++++.+.+
T Consensus 1 ~~li~tDlDGTLl~~~~~~--------------------~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~ 60 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTDGD--------------------NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPL 60 (249)
T ss_pred CeEEEEcCCCcCcCCCCCC--------------------hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCC
Confidence 4688999999999642100 123577888888877554 6666666666666777666554
Q ss_pred C
Q 013428 349 D 349 (443)
Q Consensus 349 ~ 349 (443)
.
T Consensus 61 ~ 61 (249)
T TIGR01485 61 L 61 (249)
T ss_pred C
Confidence 3
No 136
>PLN02887 hydrolase family protein
Probab=87.07 E-value=1.5 Score=48.66 Aligned_cols=59 Identities=22% Similarity=0.200 Sum_probs=45.6
Q ss_pred CCceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHHh
Q 013428 268 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDIL 346 (443)
Q Consensus 268 ~kk~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~L 346 (443)
.+.+.+++||||||+++.. .+-|...+-|+++. +...++|-|.-...-+..+++.|
T Consensus 306 ~~iKLIa~DLDGTLLn~d~-----------------------~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L 362 (580)
T PLN02887 306 PKFSYIFCDMDGTLLNSKS-----------------------QISETNAKALKEALSRGVKVVIATGKARPAVIDILKMV 362 (580)
T ss_pred cCccEEEEeCCCCCCCCCC-----------------------ccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh
Confidence 3467999999999997631 12455667788887 56999999999888888899888
Q ss_pred CCC
Q 013428 347 DPD 349 (443)
Q Consensus 347 DP~ 349 (443)
+..
T Consensus 363 ~l~ 365 (580)
T PLN02887 363 DLA 365 (580)
T ss_pred Ccc
Confidence 753
No 137
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=86.29 E-value=1.5 Score=40.86 Aligned_cols=82 Identities=21% Similarity=0.333 Sum_probs=50.6
Q ss_pred EeeCchHHHHHHHhhhccEEEEEcCCcHHH------HHHHHHHhCCCCCee--eEEEEcccceeeCCceeecccccCCCC
Q 013428 309 VKQRPHLKTFLERVAEMFEVVIFTASQSIY------AAQLLDILDPDGKLI--SRRVYRESCIFSDGTYTKDLTVLGVDL 380 (443)
Q Consensus 309 V~~RPgL~eFLe~Lsk~YEIVIfTAs~~~Y------Ad~VLd~LDP~g~~f--~~RL~Re~C~~~~g~yiKDLs~LgrDl 380 (443)
...-||+++-+++|-++|+|+|-||+...| .+.+.+.+ | ++ ++.+++. -|++-+
T Consensus 67 L~V~p~aq~v~keLt~~y~vYivtaamdhp~s~~dK~eWl~E~F-P---Fi~~qn~vfCg---------nKnivk----- 128 (180)
T COG4502 67 LGVQPFAQTVLKELTSIYNVYIVTAAMDHPKSCEDKGEWLKEKF-P---FISYQNIVFCG---------NKNIVK----- 128 (180)
T ss_pred cCccccHHHHHHHHHhhheEEEEEeccCCchhHHHHHHHHHHHC-C---CCChhhEEEec---------CCCeEE-----
Confidence 566799999999999999999999995433 22233321 1 11 1222321 133221
Q ss_pred CcEEEEECChhhhccCCCceeeeccccCC
Q 013428 381 AKVAIIDNSPQVFRLQVNNGIPIESWFDD 409 (443)
Q Consensus 381 ~kVIIIDDsp~s~~~q~~NgIpI~s~~gd 409 (443)
-=++|||.|........|-|....-+.-
T Consensus 129 -aDilIDDnp~nLE~F~G~kIlFdA~HN~ 156 (180)
T COG4502 129 -ADILIDDNPLNLENFKGNKILFDAHHNK 156 (180)
T ss_pred -eeEEecCCchhhhhccCceEEEeccccc
Confidence 1368999998776666666766655543
No 138
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=85.88 E-value=1.1 Score=43.77 Aligned_cols=39 Identities=21% Similarity=0.362 Sum_probs=30.2
Q ss_pred EEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh-hccEEEEEcCC
Q 013428 272 TLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTAS 334 (443)
Q Consensus 272 tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Ls-k~YEIVIfTAs 334 (443)
.+++|+||||++... .=|+..++|+++. +...+++.|..
T Consensus 3 ~~~~D~DGtl~~~~~------------------------~i~~a~~~l~~l~~~g~~~~~~Tnn 42 (249)
T TIGR01457 3 GYLIDLDGTMYKGKE------------------------RIPEAETFVHELQKRDIPYLFVTNN 42 (249)
T ss_pred EEEEeCCCceEcCCe------------------------eCcCHHHHHHHHHHCCCeEEEEeCC
Confidence 789999999986521 1368899999998 55888888863
No 139
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=82.87 E-value=1.7 Score=42.09 Aligned_cols=50 Identities=26% Similarity=0.323 Sum_probs=37.1
Q ss_pred EEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhh-ccEEEEEcCCc----HHHHHHHHHHh
Q 013428 273 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQ----SIYAAQLLDIL 346 (443)
Q Consensus 273 LVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Lsk-~YEIVIfTAs~----~~YAd~VLd~L 346 (443)
++||+||||+.... .=|++.++|+.+.+ .+.+++-|.+. ..+++.+.+.+
T Consensus 1 ~lfD~DGvL~~~~~------------------------~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~ 55 (236)
T TIGR01460 1 FLFDIDGVLWLGHK------------------------PIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLL 55 (236)
T ss_pred CEEeCcCccCcCCc------------------------cCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhc
Confidence 47999999987631 13688999999985 48899888544 56777777644
No 140
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=82.45 E-value=1.3 Score=42.87 Aligned_cols=44 Identities=20% Similarity=0.165 Sum_probs=30.7
Q ss_pred CceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhhccEEEE
Q 013428 269 KSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVI 330 (443)
Q Consensus 269 kk~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Lsk~YEIVI 330 (443)
|+..|+||+||||+-....+. .+..=|++.+.|+.|.+....+|
T Consensus 2 ~~~~l~lD~DGTL~~~~~~p~------------------~~~~~~~~~~~L~~L~~~~~~~v 45 (244)
T TIGR00685 2 RKRAFFFDYDGTLSEIVPDPD------------------AAVVSDRLLTILQKLAARPHNAI 45 (244)
T ss_pred CcEEEEEecCccccCCcCCCc------------------ccCCCHHHHHHHHHHHhCCCCeE
Confidence 567899999999986421111 12345889999999998765543
No 141
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=82.44 E-value=1.9 Score=43.51 Aligned_cols=55 Identities=22% Similarity=0.248 Sum_probs=40.3
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhhc-cEEEEEcCCcHH----HHHHHHH
Q 013428 270 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEM-FEVVIFTASQSI----YAAQLLD 344 (443)
Q Consensus 270 k~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Lsk~-YEIVIfTAs~~~----YAd~VLd 344 (443)
..++++||||||++-. ..=||+.+||+++.+. -.+++-|++..+ |+.++..
T Consensus 8 y~~~l~DlDGvl~~G~------------------------~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~ 63 (269)
T COG0647 8 YDGFLFDLDGVLYRGN------------------------EAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSS 63 (269)
T ss_pred cCEEEEcCcCceEeCC------------------------ccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHh
Confidence 4478999999998753 1248999999999955 888888988754 5555555
Q ss_pred HhCC
Q 013428 345 ILDP 348 (443)
Q Consensus 345 ~LDP 348 (443)
...+
T Consensus 64 ~~~~ 67 (269)
T COG0647 64 LGGV 67 (269)
T ss_pred hcCC
Confidence 3333
No 142
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=82.26 E-value=1.5 Score=43.93 Aligned_cols=75 Identities=21% Similarity=0.265 Sum_probs=42.2
Q ss_pred CCCceEEEEecCccccccccc----ccCCCCceEEEEecceeceEE-----EeeCchHHHHHHHhhhccEEEEE-cCCcH
Q 013428 267 GRKSVTLVLDLDETLVHSTLE----YCDDADFTFTVFFNMKEHTVY-----VKQRPHLKTFLERVAEMFEVVIF-TASQS 336 (443)
Q Consensus 267 ~~kk~tLVLDLDeTLVhS~~~----~~~~~df~~~i~~~~~~~~~~-----V~~RPgL~eFLe~Lsk~YEIVIf-TAs~~ 336 (443)
..|++.+|||||||.+.-+-. -..+..|+- ..-..+ -+.=||+.+||+++-++--.|.| |.-.+
T Consensus 76 k~K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~p------e~Wd~wV~a~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~ 149 (274)
T COG2503 76 KGKKKAVVLDLDETVLDNSAYQGYQVLNNKGFTP------ETWDKWVQAKKSKAVPGAVEFLNYVNSNGGKIFYISNRDQ 149 (274)
T ss_pred cCCCceEEEecchHhhcCccccchhhhcCCCCCc------cchHHHHhhcccccCccHHHHHHHHHhcCcEEEEEeccch
Confidence 455669999999999986521 111222211 000111 34559999999999977555555 44343
Q ss_pred HH-HHHHHHHhC
Q 013428 337 IY-AAQLLDILD 347 (443)
Q Consensus 337 ~Y-Ad~VLd~LD 347 (443)
.- .+.-++-|-
T Consensus 150 ~~~~~~T~~nLk 161 (274)
T COG2503 150 ENEKDGTIENLK 161 (274)
T ss_pred hcccchhHHHHH
Confidence 33 334444443
No 143
>PLN02151 trehalose-phosphatase
Probab=81.95 E-value=2.7 Score=44.04 Aligned_cols=60 Identities=15% Similarity=0.187 Sum_probs=44.7
Q ss_pred CCCceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhhccEEEEEcCCcHHHHHHHHH
Q 013428 267 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLD 344 (443)
Q Consensus 267 ~~kk~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Lsk~YEIVIfTAs~~~YAd~VLd 344 (443)
..++..|+||+||||+-....+ -.+..-|.+.+-|+.|++.+.++|-|--...-.+.++.
T Consensus 95 ~~~~~ll~lDyDGTL~PIv~~P------------------~~A~~~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~~ 154 (354)
T PLN02151 95 EGKQIVMFLDYDGTLSPIVDDP------------------DRAFMSKKMRNTVRKLAKCFPTAIVSGRCREKVSSFVK 154 (354)
T ss_pred cCCceEEEEecCccCCCCCCCc------------------ccccCCHHHHHHHHHHhcCCCEEEEECCCHHHHHHHcC
Confidence 3567899999999998432111 12445689999999999889888988887777776664
No 144
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=81.94 E-value=3.8 Score=39.76 Aligned_cols=42 Identities=17% Similarity=0.335 Sum_probs=37.7
Q ss_pred EeeCchHHHHHHHhhhc-cEEEEEcCCcHHHHHHHHHHhCCCC
Q 013428 309 VKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDILDPDG 350 (443)
Q Consensus 309 V~~RPgL~eFLe~Lsk~-YEIVIfTAs~~~YAd~VLd~LDP~g 350 (443)
+++|||.++|.+++.++ -.++|-++|+..|..+++..+--+.
T Consensus 72 i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke 114 (220)
T COG4359 72 IKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKE 114 (220)
T ss_pred cccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhcccc
Confidence 89999999999999965 8999999999999999999876443
No 145
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=80.65 E-value=2.3 Score=44.34 Aligned_cols=53 Identities=21% Similarity=0.275 Sum_probs=44.4
Q ss_pred eEEEeeCchHHHHHHHhhh-ccEEEEEcCCcHHHHHHHHHHh-C------CCCCeeeEEEE
Q 013428 306 TVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDIL-D------PDGKLISRRVY 358 (443)
Q Consensus 306 ~~~V~~RPgL~eFLe~Lsk-~YEIVIfTAs~~~YAd~VLd~L-D------P~g~~f~~RL~ 358 (443)
.-||.+-||+.++|+++.+ .+.+.|-|++...|++.+++.+ + .+..+|+.++.
T Consensus 180 ~~yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt 240 (343)
T TIGR02244 180 EKYVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIV 240 (343)
T ss_pred HHHhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEe
Confidence 3478899999999999984 5999999999999999999997 5 34567765554
No 146
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=80.53 E-value=0.9 Score=44.96 Aligned_cols=41 Identities=17% Similarity=0.450 Sum_probs=35.5
Q ss_pred EeeCchHHHHHHHhhhc--cEEEEEcCCcHHHHHHHHHHhCCC
Q 013428 309 VKQRPHLKTFLERVAEM--FEVVIFTASQSIYAAQLLDILDPD 349 (443)
Q Consensus 309 V~~RPgL~eFLe~Lsk~--YEIVIfTAs~~~YAd~VLd~LDP~ 349 (443)
+-.-||+-+.++.+++. ||++|-+-+..-+.+.+|++.+..
T Consensus 83 iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~ 125 (256)
T KOG3120|consen 83 IPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIH 125 (256)
T ss_pred CCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHH
Confidence 55679999999999854 899999999999999999987644
No 147
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=80.46 E-value=1.4 Score=41.14 Aligned_cols=81 Identities=23% Similarity=0.340 Sum_probs=43.1
Q ss_pred EeeCchHHHHHHHhhhc-cEEEEEcCCcHH-H---HHHHHHHhCCC--CCeeeEEEEcccceeeCCceeecccccCCCCC
Q 013428 309 VKQRPHLKTFLERVAEM-FEVVIFTASQSI-Y---AAQLLDILDPD--GKLISRRVYRESCIFSDGTYTKDLTVLGVDLA 381 (443)
Q Consensus 309 V~~RPgL~eFLe~Lsk~-YEIVIfTAs~~~-Y---Ad~VLd~LDP~--g~~f~~RL~Re~C~~~~g~yiKDLs~LgrDl~ 381 (443)
...=||+.+.|++|.+. +++++-|+.... + +..-.+.|+.. +......++..+ |. .++.|
T Consensus 72 l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~~~~~~~~~---------K~--~v~~D-- 138 (191)
T PF06941_consen 72 LPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPYDNLIFTGD---------KT--LVGGD-- 138 (191)
T ss_dssp --B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHHCCEEEESS---------GG--GC--S--
T ss_pred CCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCchheEEEecC---------CC--eEecc--
Confidence 55669999999999976 588887777654 1 22222222221 111222233211 22 34443
Q ss_pred cEEEEECChhhhccCCCceeeec
Q 013428 382 KVAIIDNSPQVFRLQVNNGIPIE 404 (443)
Q Consensus 382 kVIIIDDsp~s~~~q~~NgIpI~ 404 (443)
|+|||+|.....-...|+++.
T Consensus 139 --vlIDD~~~n~~~~~~~g~~~i 159 (191)
T PF06941_consen 139 --VLIDDRPHNLEQFANAGIPVI 159 (191)
T ss_dssp --EEEESSSHHHSS-SSESSEEE
T ss_pred --EEecCChHHHHhccCCCceEE
Confidence 899999998876666775443
No 148
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=80.42 E-value=2 Score=39.28 Aligned_cols=80 Identities=19% Similarity=0.188 Sum_probs=58.8
Q ss_pred EEeeCchHHHHHHHhhhc-cEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEccc-ceeeCCceeecccccCCCCCcEEE
Q 013428 308 YVKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRES-CIFSDGTYTKDLTVLGVDLAKVAI 385 (443)
Q Consensus 308 ~V~~RPgL~eFLe~Lsk~-YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~-C~~~~g~yiKDLs~LgrDl~kVII 385 (443)
.-..||++.++|+.|.+. +.++|.|......|..+.+.+.... ..++.+. +...+..+.+-++.|+.+.+.|+.
T Consensus 125 ~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~----~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~ 200 (215)
T PF00702_consen 125 RDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD----SIVFARVIGKPEPKIFLRIIKELQVKPGEVAM 200 (215)
T ss_dssp EEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS----EEEEESHETTTHHHHHHHHHHHHTCTGGGEEE
T ss_pred cCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc----ccccccccccccchhHHHHHHHHhcCCCEEEE
Confidence 456799999999999965 9999999999999999999998743 2222211 111112335556677878889999
Q ss_pred EECChh
Q 013428 386 IDNSPQ 391 (443)
Q Consensus 386 IDDsp~ 391 (443)
|-|...
T Consensus 201 vGDg~n 206 (215)
T PF00702_consen 201 VGDGVN 206 (215)
T ss_dssp EESSGG
T ss_pred EccCHH
Confidence 999763
No 149
>PLN03017 trehalose-phosphatase
Probab=80.30 E-value=3.3 Score=43.59 Aligned_cols=60 Identities=17% Similarity=0.164 Sum_probs=43.7
Q ss_pred CCCceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhhccEEEEEcCCcHHHHHHHHH
Q 013428 267 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLD 344 (443)
Q Consensus 267 ~~kk~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Lsk~YEIVIfTAs~~~YAd~VLd 344 (443)
..++..|+||+||||+--...+. ....-|.+.+-|++|++.+.++|-|--...-+..+++
T Consensus 108 ~~k~~llflD~DGTL~Piv~~p~------------------~a~i~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~~ 167 (366)
T PLN03017 108 RGKQIVMFLDYDGTLSPIVDDPD------------------KAFMSSKMRRTVKKLAKCFPTAIVTGRCIDKVYNFVK 167 (366)
T ss_pred cCCCeEEEEecCCcCcCCcCCcc------------------cccCCHHHHHHHHHHhcCCcEEEEeCCCHHHHHHhhc
Confidence 34678999999999983221110 0234588889999999999999999888877777643
No 150
>PLN02580 trehalose-phosphatase
Probab=79.84 E-value=3.6 Score=43.53 Aligned_cols=61 Identities=20% Similarity=0.226 Sum_probs=47.2
Q ss_pred CCCceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhhccEEEEEcCCcHHHHHHHHHH
Q 013428 267 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDI 345 (443)
Q Consensus 267 ~~kk~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Lsk~YEIVIfTAs~~~YAd~VLd~ 345 (443)
..++..|+||.||||+-....+ --+..=|.+.+-|+.|++.+.++|-|--...-.+.++..
T Consensus 116 ~~k~~~LfLDyDGTLaPIv~~P------------------d~A~~s~~~~~aL~~La~~~~VAIVSGR~~~~L~~~l~~ 176 (384)
T PLN02580 116 KGKKIALFLDYDGTLSPIVDDP------------------DRALMSDAMRSAVKNVAKYFPTAIISGRSRDKVYELVGL 176 (384)
T ss_pred hcCCeEEEEecCCccCCCCCCc------------------ccccCCHHHHHHHHHHhhCCCEEEEeCCCHHHHHHHhCC
Confidence 3567899999999997543221 124556899999999999999999999888888777753
No 151
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=79.30 E-value=1.1 Score=40.66 Aligned_cols=16 Identities=25% Similarity=0.553 Sum_probs=14.1
Q ss_pred ceEEEEecCccccccc
Q 013428 270 SVTLVLDLDETLVHST 285 (443)
Q Consensus 270 k~tLVLDLDeTLVhS~ 285 (443)
.+.++||+||||+++.
T Consensus 5 ~~~viFD~DGTLiDs~ 20 (188)
T PRK10725 5 YAGLIFDMDGTILDTE 20 (188)
T ss_pred ceEEEEcCCCcCccCH
Confidence 4689999999999986
No 152
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=78.72 E-value=2.5 Score=41.76 Aligned_cols=92 Identities=14% Similarity=0.095 Sum_probs=52.9
Q ss_pred CCceEEEEecCccccccccccc----CCCCceEEEEecceeceEEEeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHH
Q 013428 268 RKSVTLVLDLDETLVHSTLEYC----DDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQL 342 (443)
Q Consensus 268 ~kk~tLVLDLDeTLVhS~~~~~----~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~V 342 (443)
.++..+|||+|+|++....-.. ....|.-. .++.=...---..-|++.+|++++. +.++|++.|.-........
T Consensus 75 dg~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~-~~~~wv~~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T 153 (229)
T TIGR01675 75 DGMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPT-AFWLWLGKGAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNAT 153 (229)
T ss_pred CCCcEEEEccccccccCHHHHHHhccCCCcCCHH-HHHHHHHcCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHH
Confidence 4678999999999998752110 01111000 0000000001345799999999997 5799999999887775555
Q ss_pred HHHhCCCCCe-eeEEEEcc
Q 013428 343 LDILDPDGKL-ISRRVYRE 360 (443)
Q Consensus 343 Ld~LDP~g~~-f~~RL~Re 360 (443)
.+.|.-.|-. +.+.+.|.
T Consensus 154 ~~nL~~~G~~~~~~LiLR~ 172 (229)
T TIGR01675 154 LDNLINAGFTGWKHLILRG 172 (229)
T ss_pred HHHHHHcCCCCcCeeeecC
Confidence 5555444411 24444554
No 153
>PRK11587 putative phosphatase; Provisional
Probab=78.59 E-value=1.1 Score=42.28 Aligned_cols=15 Identities=47% Similarity=0.596 Sum_probs=13.7
Q ss_pred eEEEEecCccccccc
Q 013428 271 VTLVLDLDETLVHST 285 (443)
Q Consensus 271 ~tLVLDLDeTLVhS~ 285 (443)
+.++|||||||+++.
T Consensus 4 k~viFDlDGTL~Ds~ 18 (218)
T PRK11587 4 KGFLFDLDGTLVDSL 18 (218)
T ss_pred CEEEEcCCCCcCcCH
Confidence 589999999999986
No 154
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=78.39 E-value=3.9 Score=44.96 Aligned_cols=86 Identities=15% Similarity=0.096 Sum_probs=58.0
Q ss_pred EEeeCchHHHHHHHhhh-ccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEcccceeeCCceeecccccCCCCCcEEEE
Q 013428 308 YVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAII 386 (443)
Q Consensus 308 ~V~~RPgL~eFLe~Lsk-~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~C~~~~g~yiKDLs~LgrDl~kVIII 386 (443)
.-..||++.++|++|.+ .++++|-|...+.+|+.+++.+..+ +|.. -....+...++ .+..+.++++.|
T Consensus 403 ~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~--~~~~-----~~p~~K~~~v~---~l~~~~~~v~~V 472 (562)
T TIGR01511 403 EDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN--VRAE-----VLPDDKAALIK---ELQEKGRVVAMV 472 (562)
T ss_pred cccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc--EEcc-----CChHHHHHHHH---HHHHcCCEEEEE
Confidence 35689999999999985 5999999999999999999998764 2221 10001112222 334456789999
Q ss_pred ECChhhhccCCCceeee
Q 013428 387 DNSPQVFRLQVNNGIPI 403 (443)
Q Consensus 387 DDsp~s~~~q~~NgIpI 403 (443)
-|...-...-...++.|
T Consensus 473 GDg~nD~~al~~A~vgi 489 (562)
T TIGR01511 473 GDGINDAPALAQADVGI 489 (562)
T ss_pred eCCCccHHHHhhCCEEE
Confidence 99876554433344444
No 155
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=77.19 E-value=4.9 Score=40.54 Aligned_cols=60 Identities=20% Similarity=0.172 Sum_probs=44.3
Q ss_pred CCCceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhhccE--EEEEcCCcHHHHHHHHH
Q 013428 267 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFE--VVIFTASQSIYAAQLLD 344 (443)
Q Consensus 267 ~~kk~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Lsk~YE--IVIfTAs~~~YAd~VLd 344 (443)
..++.+++||.||||++....+.. +..=+++.+.|..|+..+. ++|.|.-...-.+..+.
T Consensus 15 ~a~~~~~~lDyDGTl~~i~~~p~~------------------a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~ 76 (266)
T COG1877 15 NARKRLLFLDYDGTLTEIVPHPEA------------------AVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFG 76 (266)
T ss_pred cccceEEEEeccccccccccCccc------------------cCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcC
Confidence 456789999999999987643321 3345788899999998888 66777777777666666
No 156
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=75.50 E-value=1.3 Score=41.11 Aligned_cols=14 Identities=36% Similarity=0.648 Sum_probs=12.7
Q ss_pred EEEEecCccccccc
Q 013428 272 TLVLDLDETLVHST 285 (443)
Q Consensus 272 tLVLDLDeTLVhS~ 285 (443)
.++|||||||+.+.
T Consensus 2 ~viFD~DGTLiDs~ 15 (197)
T TIGR01548 2 ALVLDMDGVMADVS 15 (197)
T ss_pred ceEEecCceEEech
Confidence 57999999999986
No 157
>PRK11590 hypothetical protein; Provisional
Probab=74.45 E-value=1.8 Score=41.04 Aligned_cols=39 Identities=18% Similarity=0.066 Sum_probs=34.7
Q ss_pred EeeCchHHHHH-HHhh-hccEEEEEcCCcHHHHHHHHHHhC
Q 013428 309 VKQRPHLKTFL-ERVA-EMFEVVIFTASQSIYAAQLLDILD 347 (443)
Q Consensus 309 V~~RPgL~eFL-e~Ls-k~YEIVIfTAs~~~YAd~VLd~LD 347 (443)
+..+||+.+.| +.+. +.+.++|-|++...|+.+++..+.
T Consensus 94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~ 134 (211)
T PRK11590 94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTP 134 (211)
T ss_pred CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcc
Confidence 45689999999 5677 589999999999999999999876
No 158
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=73.43 E-value=1.9 Score=39.42 Aligned_cols=14 Identities=36% Similarity=0.508 Sum_probs=12.4
Q ss_pred EEEEecCccccccc
Q 013428 272 TLVLDLDETLVHST 285 (443)
Q Consensus 272 tLVLDLDeTLVhS~ 285 (443)
.++|||||||+.+.
T Consensus 2 ~viFDlDGTL~ds~ 15 (184)
T TIGR01993 2 VWFFDLDNTLYPHS 15 (184)
T ss_pred eEEEeCCCCCCCCc
Confidence 58999999999875
No 159
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=72.82 E-value=2 Score=40.02 Aligned_cols=15 Identities=33% Similarity=0.731 Sum_probs=13.4
Q ss_pred eEEEEecCccccccc
Q 013428 271 VTLVLDLDETLVHST 285 (443)
Q Consensus 271 ~tLVLDLDeTLVhS~ 285 (443)
+.++|||||||+++.
T Consensus 3 ~~viFDlDGTL~ds~ 17 (221)
T TIGR02253 3 KAIFFDLDDTLIDTS 17 (221)
T ss_pred eEEEEeCCCCCcCCC
Confidence 478999999999985
No 160
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=72.39 E-value=2 Score=40.24 Aligned_cols=15 Identities=33% Similarity=0.412 Sum_probs=13.4
Q ss_pred eEEEEecCccccccc
Q 013428 271 VTLVLDLDETLVHST 285 (443)
Q Consensus 271 ~tLVLDLDeTLVhS~ 285 (443)
++++|||||||+.+.
T Consensus 2 k~iiFD~DGTL~ds~ 16 (220)
T TIGR03351 2 SLVVLDMAGTTVDED 16 (220)
T ss_pred cEEEEecCCCeeccC
Confidence 578999999999986
No 161
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=71.83 E-value=2 Score=38.77 Aligned_cols=15 Identities=20% Similarity=0.576 Sum_probs=13.5
Q ss_pred eEEEEecCccccccc
Q 013428 271 VTLVLDLDETLVHST 285 (443)
Q Consensus 271 ~tLVLDLDeTLVhS~ 285 (443)
+.++||+||||+.+.
T Consensus 2 ~~iiFD~DGTL~ds~ 16 (185)
T TIGR02009 2 KAVIFDMDGVIVDTA 16 (185)
T ss_pred CeEEEcCCCcccCCh
Confidence 478999999999986
No 162
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=71.67 E-value=2.3 Score=42.15 Aligned_cols=16 Identities=44% Similarity=0.576 Sum_probs=14.2
Q ss_pred ceEEEEecCccccccc
Q 013428 270 SVTLVLDLDETLVHST 285 (443)
Q Consensus 270 k~tLVLDLDeTLVhS~ 285 (443)
++.++|||||||+++.
T Consensus 13 ~k~viFDlDGTL~Ds~ 28 (272)
T PRK13223 13 PRLVMFDLDGTLVDSV 28 (272)
T ss_pred CCEEEEcCCCccccCH
Confidence 4599999999999985
No 163
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=70.92 E-value=2.4 Score=40.84 Aligned_cols=15 Identities=20% Similarity=0.215 Sum_probs=13.4
Q ss_pred eEEEEecCccccccc
Q 013428 271 VTLVLDLDETLVHST 285 (443)
Q Consensus 271 ~tLVLDLDeTLVhS~ 285 (443)
+.++||+||||+.+.
T Consensus 3 k~viFD~DGTLiDs~ 17 (253)
T TIGR01422 3 EAVIFDWAGTTVDFG 17 (253)
T ss_pred eEEEEeCCCCeecCC
Confidence 589999999999974
No 164
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=70.90 E-value=2.6 Score=41.77 Aligned_cols=20 Identities=20% Similarity=0.323 Sum_probs=17.1
Q ss_pred CCCCceEEEEecCccccccc
Q 013428 266 QGRKSVTLVLDLDETLVHST 285 (443)
Q Consensus 266 ~~~kk~tLVLDLDeTLVhS~ 285 (443)
....-+.+||||||||++|.
T Consensus 20 ~~~~~k~vIFDlDGTLvDS~ 39 (260)
T PLN03243 20 LGCGWLGVVLEWEGVIVEDD 39 (260)
T ss_pred hcCCceEEEEeCCCceeCCc
Confidence 45677899999999999984
No 165
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=70.12 E-value=2.5 Score=41.08 Aligned_cols=16 Identities=31% Similarity=0.453 Sum_probs=14.1
Q ss_pred ceEEEEecCccccccc
Q 013428 270 SVTLVLDLDETLVHST 285 (443)
Q Consensus 270 k~tLVLDLDeTLVhS~ 285 (443)
-+.++|||||||+.+.
T Consensus 22 ~k~viFDlDGTLiDs~ 37 (248)
T PLN02770 22 LEAVLFDVDGTLCDSD 37 (248)
T ss_pred cCEEEEcCCCccCcCH
Confidence 3589999999999986
No 166
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=69.80 E-value=0.77 Score=44.81 Aligned_cols=65 Identities=15% Similarity=0.152 Sum_probs=38.7
Q ss_pred CCceEEEEecCccccccccc----cc-----CCCCceEEEEecceeceEEEeeCchHHHHHHHhhh-ccEEEEEcCCcHH
Q 013428 268 RKSVTLVLDLDETLVHSTLE----YC-----DDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSI 337 (443)
Q Consensus 268 ~kk~tLVLDLDeTLVhS~~~----~~-----~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Lsk-~YEIVIfTAs~~~ 337 (443)
.++..+|||+||||+..... .. ...+|.-- ..... -..=||+.+|++++.+ .++|++-|.-...
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~w--v~~~~----~~aip~a~~l~~~~~~~G~~V~~iT~R~~~ 143 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEW--VASGK----APAIPGALELYNYARSRGVKVFFITGRPES 143 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHH--HHCTG----GEEETTHHHHHHHHHHTTEEEEEEEEEETT
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHH--Hhccc----CcccHHHHHHHHHHHHCCCeEEEEecCCch
Confidence 56789999999999854321 00 01111100 00000 1344889999999985 5888888876544
Q ss_pred H
Q 013428 338 Y 338 (443)
Q Consensus 338 Y 338 (443)
.
T Consensus 144 ~ 144 (229)
T PF03767_consen 144 Q 144 (229)
T ss_dssp C
T ss_pred h
Confidence 3
No 167
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=69.69 E-value=2.3 Score=39.27 Aligned_cols=14 Identities=21% Similarity=0.211 Sum_probs=12.6
Q ss_pred EEEEecCccccccc
Q 013428 272 TLVLDLDETLVHST 285 (443)
Q Consensus 272 tLVLDLDeTLVhS~ 285 (443)
.++|||||||+.+.
T Consensus 2 ~viFDlDGTL~d~~ 15 (203)
T TIGR02252 2 LITFDAVGTLLALK 15 (203)
T ss_pred eEEEecCCceeeeC
Confidence 68999999999874
No 168
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=69.65 E-value=2.5 Score=41.31 Aligned_cols=16 Identities=19% Similarity=0.173 Sum_probs=14.0
Q ss_pred ceEEEEecCccccccc
Q 013428 270 SVTLVLDLDETLVHST 285 (443)
Q Consensus 270 k~tLVLDLDeTLVhS~ 285 (443)
-++++|||||||+.+.
T Consensus 4 ~k~vIFDlDGTLiDs~ 19 (267)
T PRK13478 4 IQAVIFDWAGTTVDFG 19 (267)
T ss_pred eEEEEEcCCCCeecCC
Confidence 3689999999999984
No 169
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=69.62 E-value=8.5 Score=43.55 Aligned_cols=62 Identities=23% Similarity=0.222 Sum_probs=44.4
Q ss_pred CCCceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhh--ccEEEEEcCCcHHHHHHHHH
Q 013428 267 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE--MFEVVIFTASQSIYAAQLLD 344 (443)
Q Consensus 267 ~~kk~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Lsk--~YEIVIfTAs~~~YAd~VLd 344 (443)
..++..+++|+||||+.....+. ....-|.+.+.|+.|.+ ...|+|-|.-.....++++.
T Consensus 489 ~~~~rLi~~D~DGTL~~~~~~~~------------------~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~ 550 (726)
T PRK14501 489 AASRRLLLLDYDGTLVPFAPDPE------------------LAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFG 550 (726)
T ss_pred hccceEEEEecCccccCCCCCcc------------------cCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhC
Confidence 35678999999999986421110 01235788899999997 78899999888887776665
Q ss_pred Hh
Q 013428 345 IL 346 (443)
Q Consensus 345 ~L 346 (443)
.+
T Consensus 551 ~~ 552 (726)
T PRK14501 551 DL 552 (726)
T ss_pred CC
Confidence 43
No 170
>PRK11590 hypothetical protein; Provisional
Probab=68.55 E-value=7.7 Score=36.70 Aligned_cols=17 Identities=29% Similarity=0.421 Sum_probs=14.1
Q ss_pred CceEEEEecCccccccc
Q 013428 269 KSVTLVLDLDETLVHST 285 (443)
Q Consensus 269 kk~tLVLDLDeTLVhS~ 285 (443)
++++++|||||||++..
T Consensus 5 ~~k~~iFD~DGTL~~~d 21 (211)
T PRK11590 5 ERRVVFFDLDGTLHQQD 21 (211)
T ss_pred cceEEEEecCCCCcccc
Confidence 45699999999999654
No 171
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=68.24 E-value=2.9 Score=40.27 Aligned_cols=16 Identities=38% Similarity=0.551 Sum_probs=13.7
Q ss_pred ceEEEEecCccccccc
Q 013428 270 SVTLVLDLDETLVHST 285 (443)
Q Consensus 270 k~tLVLDLDeTLVhS~ 285 (443)
-+.++|||||||+.+.
T Consensus 10 ~k~iiFDlDGTL~D~~ 25 (238)
T PRK10748 10 ISALTFDLDDTLYDNR 25 (238)
T ss_pred ceeEEEcCcccccCCh
Confidence 3589999999999974
No 172
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=67.76 E-value=4.4 Score=44.17 Aligned_cols=87 Identities=14% Similarity=0.126 Sum_probs=61.8
Q ss_pred EEeeCchHHHHHHHhhh-cc-EEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEcccceeeCCceeecccccCCCCCcEEE
Q 013428 308 YVKQRPHLKTFLERVAE-MF-EVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAI 385 (443)
Q Consensus 308 ~V~~RPgL~eFLe~Lsk-~Y-EIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~C~~~~g~yiKDLs~LgrDl~kVII 385 (443)
.-..||++.+.|++|.+ .+ +++|-|...+.+|..+++.+.... +|.... ...-.+-+..++...++++.
T Consensus 360 ~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~-~f~~~~--------p~~K~~~i~~l~~~~~~v~~ 430 (536)
T TIGR01512 360 SDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE-VHAELL--------PEDKLEIVKELREKYGPVAM 430 (536)
T ss_pred eccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh-hhhccC--------cHHHHHHHHHHHhcCCEEEE
Confidence 46789999999999985 58 999999999999999999998764 342111 11112334455666689999
Q ss_pred EECChhhhccCCCceeee
Q 013428 386 IDNSPQVFRLQVNNGIPI 403 (443)
Q Consensus 386 IDDsp~s~~~q~~NgIpI 403 (443)
|-|...-...-...++.|
T Consensus 431 vGDg~nD~~al~~A~vgi 448 (536)
T TIGR01512 431 VGDGINDAPALAAADVGI 448 (536)
T ss_pred EeCCHHHHHHHHhCCEEE
Confidence 999987554433344433
No 173
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=67.55 E-value=2.3 Score=37.42 Aligned_cols=14 Identities=43% Similarity=0.776 Sum_probs=12.4
Q ss_pred EEEEecCccccccc
Q 013428 272 TLVLDLDETLVHST 285 (443)
Q Consensus 272 tLVLDLDeTLVhS~ 285 (443)
+++||+||||+++.
T Consensus 1 ~iifD~DGTL~d~~ 14 (154)
T TIGR01549 1 AILFDIDGTLVDSS 14 (154)
T ss_pred CeEecCCCcccccH
Confidence 47999999999985
No 174
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=67.40 E-value=8.2 Score=37.82 Aligned_cols=54 Identities=24% Similarity=0.238 Sum_probs=33.5
Q ss_pred ceEEEEecCcccc-cccccccCCCCceEEEEecceeceEEEeeCchHHHHHH-HhhhccEEEEEcCCcHHHHHHHHHHhC
Q 013428 270 SVTLVLDLDETLV-HSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLE-RVAEMFEVVIFTASQSIYAAQLLDILD 347 (443)
Q Consensus 270 k~tLVLDLDeTLV-hS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe-~Lsk~YEIVIfTAs~~~YAd~VLd~LD 347 (443)
++.|+.||||||+ ... .-+.-+.++|+ ......-+++-|.-+..-+..++....
T Consensus 2 ~~ll~sDlD~Tl~~~~~------------------------~~~~~l~~~l~~~~~~~~~~v~~TGRs~~~~~~~~~~~~ 57 (247)
T PF05116_consen 2 PRLLASDLDGTLIDGDD------------------------EALARLEELLEQQARPEILFVYVTGRSLESVLRLLREYN 57 (247)
T ss_dssp SEEEEEETBTTTBHCHH------------------------HHHHHHHHHHHHHHCCGEEEEEE-SS-HHHHHHHHHHCT
T ss_pred CEEEEEECCCCCcCCCH------------------------HHHHHHHHHHHHhhCCCceEEEECCCCHHHHHHHHHhCC
Confidence 6799999999998 211 01334455566 233456666777777777788877643
No 175
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=66.22 E-value=2.3 Score=39.46 Aligned_cols=13 Identities=54% Similarity=0.708 Sum_probs=11.9
Q ss_pred EEEecCccccccc
Q 013428 273 LVLDLDETLVHST 285 (443)
Q Consensus 273 LVLDLDeTLVhS~ 285 (443)
+||||||||+.+.
T Consensus 1 iiFDlDGTL~Ds~ 13 (205)
T TIGR01454 1 VVFDLDGVLVDSF 13 (205)
T ss_pred CeecCcCccccCH
Confidence 5899999999986
No 176
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=65.98 E-value=2.9 Score=37.71 Aligned_cols=14 Identities=21% Similarity=0.605 Sum_probs=12.5
Q ss_pred EEEEecCccccccc
Q 013428 272 TLVLDLDETLVHST 285 (443)
Q Consensus 272 tLVLDLDeTLVhS~ 285 (443)
.+|||+||||+.+.
T Consensus 1 ~iiFD~DGTL~ds~ 14 (185)
T TIGR01990 1 AVIFDLDGVITDTA 14 (185)
T ss_pred CeEEcCCCccccCh
Confidence 37999999999987
No 177
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=65.66 E-value=21 Score=35.78 Aligned_cols=59 Identities=19% Similarity=0.212 Sum_probs=40.8
Q ss_pred CceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHHhC
Q 013428 269 KSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILD 347 (443)
Q Consensus 269 kk~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~LD 347 (443)
-++.+++|||+|||-...+..+ +...+.++. ..|+||.-|+-+..=-..+-+.|+
T Consensus 6 ~~~lIFtDlD~TLl~~~ye~~p------------------------A~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~ 61 (274)
T COG3769 6 MPLLIFTDLDGTLLPHSYEWQP------------------------AAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLG 61 (274)
T ss_pred cceEEEEcccCcccCCCCCCCc------------------------cchHHHHHHHcCCeEEEeccchHHHHHHHHHhcC
Confidence 3568889999999984332211 123455555 679999999887766667778888
Q ss_pred CCCC
Q 013428 348 PDGK 351 (443)
Q Consensus 348 P~g~ 351 (443)
..|.
T Consensus 62 v~~~ 65 (274)
T COG3769 62 VQGL 65 (274)
T ss_pred CCCC
Confidence 7764
No 178
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=65.22 E-value=3.8 Score=38.63 Aligned_cols=17 Identities=24% Similarity=0.505 Sum_probs=14.6
Q ss_pred CceEEEEecCccccccc
Q 013428 269 KSVTLVLDLDETLVHST 285 (443)
Q Consensus 269 kk~tLVLDLDeTLVhS~ 285 (443)
+.+.++||+||||+++.
T Consensus 6 ~~k~iiFD~DGTL~d~~ 22 (222)
T PRK10826 6 QILAAIFDMDGLLIDSE 22 (222)
T ss_pred cCcEEEEcCCCCCCcCH
Confidence 35689999999999885
No 179
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=65.08 E-value=3.5 Score=41.28 Aligned_cols=18 Identities=28% Similarity=0.381 Sum_probs=15.2
Q ss_pred CCceEEEEecCccccccc
Q 013428 268 RKSVTLVLDLDETLVHST 285 (443)
Q Consensus 268 ~kk~tLVLDLDeTLVhS~ 285 (443)
.+-+.+||||||||+.+.
T Consensus 38 ~~~k~VIFDlDGTLvDS~ 55 (286)
T PLN02779 38 ALPEALLFDCDGVLVETE 55 (286)
T ss_pred cCCcEEEEeCceeEEccc
Confidence 344689999999999987
No 180
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=64.79 E-value=11 Score=36.02 Aligned_cols=54 Identities=19% Similarity=0.142 Sum_probs=33.1
Q ss_pred EEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhhccEEEEEcCCcHHHHHHHHHHhCCC
Q 013428 272 TLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPD 349 (443)
Q Consensus 272 tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Lsk~YEIVIfTAs~~~YAd~VLd~LDP~ 349 (443)
.+++||||||++.... +.| +.+-++...+...++|-|.-...-+..++..++..
T Consensus 1 li~~DlDgTLl~~~~~-----------------------~~~-~~~~~~~~~~gi~~viaTGR~~~~v~~~~~~l~l~ 54 (236)
T TIGR02471 1 LIITDLDNTLLGDDEG-----------------------LAS-FVELLRGSGDAVGFGIATGRSVESAKSRYAKLNLP 54 (236)
T ss_pred CeEEeccccccCCHHH-----------------------HHH-HHHHHHhcCCCceEEEEeCCCHHHHHHHHHhCCCC
Confidence 3688999999974211 011 12344433345667777777777777777776543
No 181
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=64.78 E-value=3.9 Score=37.26 Aligned_cols=16 Identities=31% Similarity=0.439 Sum_probs=13.4
Q ss_pred ceEEEEecCccccccc
Q 013428 270 SVTLVLDLDETLVHST 285 (443)
Q Consensus 270 k~tLVLDLDeTLVhS~ 285 (443)
.+++|||+||||+...
T Consensus 4 ~k~viFD~DGTLid~~ 19 (201)
T TIGR01491 4 IKLIIFDLDGTLTDVM 19 (201)
T ss_pred ceEEEEeCCCCCcCCc
Confidence 3589999999999853
No 182
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=64.69 E-value=6.1 Score=43.22 Aligned_cols=87 Identities=14% Similarity=0.076 Sum_probs=60.3
Q ss_pred EEeeCchHHHHHHHhh-hc-cEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEcccceeeCCceeecccccCCCCCcEEE
Q 013428 308 YVKQRPHLKTFLERVA-EM-FEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAI 385 (443)
Q Consensus 308 ~V~~RPgL~eFLe~Ls-k~-YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~C~~~~g~yiKDLs~LgrDl~kVII 385 (443)
....|||+.+.|++|. +. ++++|-|...+.+|..+++.++... +|... . ...+ .+-+..++....+++.
T Consensus 382 ~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~-~f~~~-~----p~~K---~~~v~~l~~~~~~v~~ 452 (556)
T TIGR01525 382 RDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE-VHAEL-L----PEDK---LAIVKELQEEGGVVAM 452 (556)
T ss_pred cccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe-eeccC-C----HHHH---HHHHHHHHHcCCEEEE
Confidence 3668999999999997 46 9999999999999999999998854 44321 1 0011 1223334445568999
Q ss_pred EECChhhhccCCCceeee
Q 013428 386 IDNSPQVFRLQVNNGIPI 403 (443)
Q Consensus 386 IDDsp~s~~~q~~NgIpI 403 (443)
|-|...-...-...++-|
T Consensus 453 vGDg~nD~~al~~A~vgi 470 (556)
T TIGR01525 453 VGDGINDAPALAAADVGI 470 (556)
T ss_pred EECChhHHHHHhhCCEeE
Confidence 999987654433344444
No 183
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=64.45 E-value=3.4 Score=38.35 Aligned_cols=15 Identities=40% Similarity=0.654 Sum_probs=13.3
Q ss_pred eEEEEecCccccccc
Q 013428 271 VTLVLDLDETLVHST 285 (443)
Q Consensus 271 ~tLVLDLDeTLVhS~ 285 (443)
+.++||+||||+++.
T Consensus 2 k~viFD~DGTL~d~~ 16 (224)
T TIGR02254 2 KTLLFDLDDTILDFQ 16 (224)
T ss_pred CEEEEcCcCcccccc
Confidence 478999999999975
No 184
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=64.27 E-value=2.7 Score=38.89 Aligned_cols=13 Identities=54% Similarity=0.802 Sum_probs=11.7
Q ss_pred EEEecCccccccc
Q 013428 273 LVLDLDETLVHST 285 (443)
Q Consensus 273 LVLDLDeTLVhS~ 285 (443)
+|||+||||+.+.
T Consensus 1 viFD~DGTL~Ds~ 13 (213)
T TIGR01449 1 VLFDLDGTLVDSA 13 (213)
T ss_pred CeecCCCccccCH
Confidence 5899999999976
No 185
>PRK09449 dUMP phosphatase; Provisional
Probab=64.07 E-value=3.4 Score=38.73 Aligned_cols=14 Identities=43% Similarity=0.520 Sum_probs=12.3
Q ss_pred eEEEEecCcccccc
Q 013428 271 VTLVLDLDETLVHS 284 (443)
Q Consensus 271 ~tLVLDLDeTLVhS 284 (443)
++++|||||||++.
T Consensus 4 k~iiFDlDGTLid~ 17 (224)
T PRK09449 4 DWILFDADETLFHF 17 (224)
T ss_pred cEEEEcCCCchhcc
Confidence 58999999999974
No 186
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=63.72 E-value=3.7 Score=37.87 Aligned_cols=15 Identities=33% Similarity=0.377 Sum_probs=13.2
Q ss_pred eEEEEecCccccccc
Q 013428 271 VTLVLDLDETLVHST 285 (443)
Q Consensus 271 ~tLVLDLDeTLVhS~ 285 (443)
+.++||+||||+++.
T Consensus 2 k~viFD~dgTLiD~~ 16 (198)
T TIGR01428 2 KALVFDVYGTLFDVH 16 (198)
T ss_pred cEEEEeCCCcCccHH
Confidence 378999999999975
No 187
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=63.69 E-value=4 Score=38.00 Aligned_cols=15 Identities=20% Similarity=0.419 Sum_probs=13.1
Q ss_pred eEEEEecCccccccc
Q 013428 271 VTLVLDLDETLVHST 285 (443)
Q Consensus 271 ~tLVLDLDeTLVhS~ 285 (443)
+.++|||||||+++.
T Consensus 3 k~viFDldGtL~d~~ 17 (211)
T TIGR02247 3 KAVIFDFGGVLLPSP 17 (211)
T ss_pred eEEEEecCCceecCH
Confidence 489999999999874
No 188
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=63.53 E-value=17 Score=34.82 Aligned_cols=38 Identities=13% Similarity=0.038 Sum_probs=33.8
Q ss_pred EeeCchHHHHHH-Hhh-hccEEEEEcCCcHHHHHHHHHHh
Q 013428 309 VKQRPHLKTFLE-RVA-EMFEVVIFTASQSIYAAQLLDIL 346 (443)
Q Consensus 309 V~~RPgL~eFLe-~Ls-k~YEIVIfTAs~~~YAd~VLd~L 346 (443)
+..+||+.+.|+ ++. +.+.++|-|++...|++++++..
T Consensus 93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~ 132 (210)
T TIGR01545 93 VTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDS 132 (210)
T ss_pred CCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhc
Confidence 357999999995 777 68999999999999999999774
No 189
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=62.65 E-value=3.7 Score=36.91 Aligned_cols=13 Identities=38% Similarity=0.516 Sum_probs=11.9
Q ss_pred EEEecCccccccc
Q 013428 273 LVLDLDETLVHST 285 (443)
Q Consensus 273 LVLDLDeTLVhS~ 285 (443)
|+|||||||+.+.
T Consensus 2 viFD~DGTL~D~~ 14 (175)
T TIGR01493 2 MVFDVYGTLVDVH 14 (175)
T ss_pred eEEecCCcCcccH
Confidence 7899999999976
No 190
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=62.44 E-value=3.9 Score=38.11 Aligned_cols=16 Identities=44% Similarity=0.551 Sum_probs=13.6
Q ss_pred ceEEEEecCccccccc
Q 013428 270 SVTLVLDLDETLVHST 285 (443)
Q Consensus 270 k~tLVLDLDeTLVhS~ 285 (443)
-+.++||+||||+++.
T Consensus 6 ~~~iiFD~DGTL~d~~ 21 (226)
T PRK13222 6 IRAVAFDLDGTLVDSA 21 (226)
T ss_pred CcEEEEcCCcccccCH
Confidence 3489999999999875
No 191
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=61.76 E-value=4.4 Score=38.01 Aligned_cols=16 Identities=38% Similarity=0.424 Sum_probs=13.8
Q ss_pred ceEEEEecCccccccc
Q 013428 270 SVTLVLDLDETLVHST 285 (443)
Q Consensus 270 k~tLVLDLDeTLVhS~ 285 (443)
.+.++||+||||+.+.
T Consensus 4 ~~~viFD~DGTL~d~~ 19 (221)
T PRK10563 4 IEAVFFDCDGTLVDSE 19 (221)
T ss_pred CCEEEECCCCCCCCCh
Confidence 3589999999999975
No 192
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=60.73 E-value=4.2 Score=35.32 Aligned_cols=13 Identities=46% Similarity=0.828 Sum_probs=11.7
Q ss_pred EEEecCccccccc
Q 013428 273 LVLDLDETLVHST 285 (443)
Q Consensus 273 LVLDLDeTLVhS~ 285 (443)
++||+||||+++.
T Consensus 1 iifD~dgtL~d~~ 13 (176)
T PF13419_consen 1 IIFDLDGTLVDTD 13 (176)
T ss_dssp EEEESBTTTEEHH
T ss_pred cEEECCCCcEeCH
Confidence 6899999999875
No 193
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=59.34 E-value=5.4 Score=39.63 Aligned_cols=91 Identities=16% Similarity=0.101 Sum_probs=67.8
Q ss_pred EEEeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEccccee--e---CCceeecccccCCCC
Q 013428 307 VYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIF--S---DGTYTKDLTVLGVDL 380 (443)
Q Consensus 307 ~~V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~C~~--~---~g~yiKDLs~LgrDl 380 (443)
.+....|-+ ++|+.++ +.+.|.|.|....++= .++..++.. .+|+..+. +|.. . ...|.+-|.++|..+
T Consensus 111 ~~~~~~~~~-~~lq~lR~~g~~l~iisN~d~r~~-~~l~~~~l~-~~fD~vv~--S~e~g~~KPDp~If~~al~~l~v~P 185 (237)
T KOG3085|consen 111 AWKYLDGMQ-ELLQKLRKKGTILGIISNFDDRLR-LLLLPLGLS-AYFDFVVE--SCEVGLEKPDPRIFQLALERLGVKP 185 (237)
T ss_pred CceeccHHH-HHHHHHHhCCeEEEEecCCcHHHH-HHhhccCHH-Hhhhhhhh--hhhhccCCCChHHHHHHHHHhCCCh
Confidence 345556656 9999999 5689999999988877 777777776 58888776 3432 2 346888899999999
Q ss_pred CcEEEEECChhh-hccCCCceee
Q 013428 381 AKVAIIDNSPQV-FRLQVNNGIP 402 (443)
Q Consensus 381 ~kVIIIDDsp~s-~~~q~~NgIp 402 (443)
+.+|.|||.... +....+=|+.
T Consensus 186 ee~vhIgD~l~nD~~gA~~~G~~ 208 (237)
T KOG3085|consen 186 EECVHIGDLLENDYEGARNLGWH 208 (237)
T ss_pred HHeEEecCccccccHhHHHcCCE
Confidence 999999999977 5444333433
No 194
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=57.59 E-value=4.7 Score=35.99 Aligned_cols=13 Identities=38% Similarity=0.769 Sum_probs=11.9
Q ss_pred EEEecCccccccc
Q 013428 273 LVLDLDETLVHST 285 (443)
Q Consensus 273 LVLDLDeTLVhS~ 285 (443)
++|||||||+.+.
T Consensus 2 vlFDlDgtLv~~~ 14 (183)
T TIGR01509 2 ILFDLDGVLVDTS 14 (183)
T ss_pred eeeccCCceechH
Confidence 7999999999985
No 195
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=55.46 E-value=24 Score=35.92 Aligned_cols=81 Identities=12% Similarity=0.138 Sum_probs=46.1
Q ss_pred CceEEEEecCccccccccccc----CCCCceEEEEec-ceeceEEEeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHH
Q 013428 269 KSVTLVLDLDETLVHSTLEYC----DDADFTFTVFFN-MKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQL 342 (443)
Q Consensus 269 kk~tLVLDLDeTLVhS~~~~~----~~~df~~~i~~~-~~~~~~~V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~V 342 (443)
++-.+|||+|||++....... ....|.- ..+. .-...--..-=|++.+|++++. ..+.|++.|.-....-+.=
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~-~~w~~~Wv~~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT 178 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDS-ELYDEEFVNKGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVT 178 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCCh-hhhhHHHHhcccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHH
Confidence 356999999999995431100 0111110 0000 0000001223489999999997 5699999998877655555
Q ss_pred HHHhCCCC
Q 013428 343 LDILDPDG 350 (443)
Q Consensus 343 Ld~LDP~g 350 (443)
++.|...|
T Consensus 179 ~~NL~kaG 186 (275)
T TIGR01680 179 EANLKKAG 186 (275)
T ss_pred HHHHHHcC
Confidence 55565555
No 196
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=55.39 E-value=29 Score=32.52 Aligned_cols=62 Identities=18% Similarity=0.223 Sum_probs=40.0
Q ss_pred EEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHHh
Q 013428 273 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDIL 346 (443)
Q Consensus 273 LVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~L 346 (443)
+|.|+||||.-|-... ...++ .... +.|||+.++...+. +.|.++=-|+-.-..|...-+.|
T Consensus 2 VvsDIDGTiT~SD~~G-----~i~~~----~G~d---~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L 64 (157)
T PF08235_consen 2 VVSDIDGTITKSDVLG-----HILPI----LGKD---WTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWL 64 (157)
T ss_pred EEEeccCCcCccchhh-----hhhhc----cCch---hhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHH
Confidence 6889999998773210 00110 1111 67999999999999 55888777887655555544444
No 197
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=54.80 E-value=13 Score=33.58 Aligned_cols=47 Identities=17% Similarity=0.260 Sum_probs=37.6
Q ss_pred eCchHH----HHHHHhh-hccEEEEEcCCcHHHHHHHHHHhCCCC-CeeeEEE
Q 013428 311 QRPHLK----TFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDG-KLISRRV 357 (443)
Q Consensus 311 ~RPgL~----eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~LDP~g-~~f~~RL 357 (443)
++|++. +||+.+. +.++++|-|++...+++.+++.+.... .++..++
T Consensus 86 ~~~~~~~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~ 138 (192)
T PF12710_consen 86 LFPGFIPDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNEL 138 (192)
T ss_dssp HCTTCHTTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEE
T ss_pred cCcCchhhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEee
Confidence 357777 9999985 779999999999999999999887654 2344455
No 198
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=52.34 E-value=5.5 Score=42.15 Aligned_cols=19 Identities=5% Similarity=0.279 Sum_probs=16.1
Q ss_pred CCCceEEEEecCccccccc
Q 013428 267 GRKSVTLVLDLDETLVHST 285 (443)
Q Consensus 267 ~~kk~tLVLDLDeTLVhS~ 285 (443)
..+-+.+|||||||||.+.
T Consensus 128 ~~~~~~VIFDlDGTLIDS~ 146 (381)
T PLN02575 128 GCGWLGAIFEWEGVIIEDN 146 (381)
T ss_pred cCCCCEEEEcCcCcceeCH
Confidence 4567799999999999875
No 199
>PLN02382 probable sucrose-phosphatase
Probab=51.18 E-value=31 Score=36.63 Aligned_cols=17 Identities=35% Similarity=0.530 Sum_probs=14.3
Q ss_pred CCceEEEEecCcccccc
Q 013428 268 RKSVTLVLDLDETLVHS 284 (443)
Q Consensus 268 ~kk~tLVLDLDeTLVhS 284 (443)
.+++.|+.||||||+..
T Consensus 7 ~~~~lI~sDLDGTLL~~ 23 (413)
T PLN02382 7 SPRLMIVSDLDHTMVDH 23 (413)
T ss_pred CCCEEEEEcCCCcCcCC
Confidence 45789999999999965
No 200
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=50.91 E-value=6.2 Score=42.03 Aligned_cols=15 Identities=33% Similarity=0.643 Sum_probs=13.7
Q ss_pred eEEEEecCccccccc
Q 013428 271 VTLVLDLDETLVHST 285 (443)
Q Consensus 271 ~tLVLDLDeTLVhS~ 285 (443)
..++|||||||+++.
T Consensus 242 k~vIFDlDGTLiDs~ 256 (459)
T PRK06698 242 QALIFDMDGTLFQTD 256 (459)
T ss_pred hheeEccCCceecch
Confidence 589999999999986
No 201
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=49.52 E-value=27 Score=33.48 Aligned_cols=48 Identities=23% Similarity=0.159 Sum_probs=28.5
Q ss_pred EEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhhccE--EEEEcCCcHHHH
Q 013428 274 VLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFE--VVIFTASQSIYA 339 (443)
Q Consensus 274 VLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Lsk~YE--IVIfTAs~~~YA 339 (443)
.||.||||.-....+ --...-|++.+.|+.|+.... |+|-|.-...-.
T Consensus 1 ~lDyDGTL~p~~~~p------------------~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~ 50 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDP------------------DAAVPPPELRELLRALAADPNNTVAIVSGRSLDDL 50 (235)
T ss_dssp EEE-TTTSS---S-G------------------GG----HHHHHHHHHHHHHSE--EEEE-SS-HHHH
T ss_pred CcccCCccCCCCCCc------------------cccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHh
Confidence 589999997554222 124567999999999998876 777777666653
No 202
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=49.45 E-value=29 Score=40.45 Aligned_cols=60 Identities=17% Similarity=0.114 Sum_probs=39.1
Q ss_pred CCCceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh--hccEEEEEcCCcHHHHHHHHH
Q 013428 267 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA--EMFEVVIFTASQSIYAAQLLD 344 (443)
Q Consensus 267 ~~kk~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Ls--k~YEIVIfTAs~~~YAd~VLd 344 (443)
..++..|+||+||||+..... -+..-|++.+-|+.|. +...++|-|.-...-.+.++.
T Consensus 593 ~~~~rlI~LDyDGTLlp~~~~--------------------~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~ 652 (854)
T PLN02205 593 RTTTRAILLDYDGTLMPQASI--------------------DKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFS 652 (854)
T ss_pred hhcCeEEEEecCCcccCCccc--------------------cCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhC
Confidence 345778999999999954210 0122367888888875 346777777766666666554
Q ss_pred Hh
Q 013428 345 IL 346 (443)
Q Consensus 345 ~L 346 (443)
.+
T Consensus 653 ~~ 654 (854)
T PLN02205 653 PC 654 (854)
T ss_pred CC
Confidence 43
No 203
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=46.66 E-value=22 Score=35.57 Aligned_cols=99 Identities=18% Similarity=0.245 Sum_probs=56.1
Q ss_pred EEeeCchHHHHHHHhhhc-cEEEEEcCCcHHHHHHHHHHhC---CCCCeeeEEEEcccce----eeC---Cceeeccccc
Q 013428 308 YVKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDILD---PDGKLISRRVYRESCI----FSD---GTYTKDLTVL 376 (443)
Q Consensus 308 ~V~~RPgL~eFLe~Lsk~-YEIVIfTAs~~~YAd~VLd~LD---P~g~~f~~RL~Re~C~----~~~---g~yiKDLs~L 376 (443)
.+.+|.|+.+|++.|.++ --+.|||||.-...+.+|+.-. |.=+.++..+.-+.-. +.+ ..|.|+-..+
T Consensus 88 ~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~~~l 167 (246)
T PF05822_consen 88 DIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNESAL 167 (246)
T ss_dssp ---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHHHHH
T ss_pred chhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCcccc
Confidence 488999999999999965 8999999999999999999863 2223445544322111 111 1233443322
Q ss_pred --------CCCCCcEEEEECChhhhcc-----CCCceeeeccc
Q 013428 377 --------GVDLAKVAIIDNSPQVFRL-----QVNNGIPIESW 406 (443)
Q Consensus 377 --------grDl~kVIIIDDsp~s~~~-----q~~NgIpI~s~ 406 (443)
-....|||++=|+..-..+ ..+|.|.|-=.
T Consensus 168 ~~~~~~~~~~~R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFL 210 (246)
T PF05822_consen 168 EDSPYFKQLKKRTNVLLLGDSLGDLHMADGVPDEENVLKIGFL 210 (246)
T ss_dssp TTHHHHHCTTT--EEEEEESSSGGGGTTTT-S--SEEEEEEEE
T ss_pred cCchHHHHhccCCcEEEecCccCChHhhcCCCccccEEEEEec
Confidence 2356889999999975533 34566666444
No 204
>PLN02940 riboflavin kinase
Probab=45.97 E-value=10 Score=39.71 Aligned_cols=16 Identities=38% Similarity=0.630 Sum_probs=13.9
Q ss_pred ceEEEEecCccccccc
Q 013428 270 SVTLVLDLDETLVHST 285 (443)
Q Consensus 270 k~tLVLDLDeTLVhS~ 285 (443)
-+.++|||||||+.+.
T Consensus 11 ik~VIFDlDGTLvDt~ 26 (382)
T PLN02940 11 VSHVILDLDGTLLNTD 26 (382)
T ss_pred CCEEEECCcCcCCcCH
Confidence 4579999999999986
No 205
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=45.90 E-value=39 Score=39.10 Aligned_cols=64 Identities=17% Similarity=0.156 Sum_probs=44.1
Q ss_pred CCCceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhh--ccEEEEEcCCcHHHHHHHHH
Q 013428 267 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE--MFEVVIFTASQSIYAAQLLD 344 (443)
Q Consensus 267 ~~kk~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Lsk--~YEIVIfTAs~~~YAd~VLd 344 (443)
..++..|+||.||||+.....+. ...-+..-|++.+-|+.|++ .-.|+|-|.-...-.+.++.
T Consensus 504 ~a~~rll~LDyDGTL~~~~~~~~---------------~p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~ 568 (797)
T PLN03063 504 KSNNRLLILGFYGTLTEPRNSQI---------------KEMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFG 568 (797)
T ss_pred hccCeEEEEecCccccCCCCCcc---------------ccccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhC
Confidence 44567889999999985322110 01124456889999999985 46788888877777777765
Q ss_pred H
Q 013428 345 I 345 (443)
Q Consensus 345 ~ 345 (443)
.
T Consensus 569 ~ 569 (797)
T PLN03063 569 E 569 (797)
T ss_pred C
Confidence 4
No 206
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=45.70 E-value=11 Score=35.61 Aligned_cols=16 Identities=25% Similarity=0.515 Sum_probs=13.5
Q ss_pred ceEEEEecCccccccc
Q 013428 270 SVTLVLDLDETLVHST 285 (443)
Q Consensus 270 k~tLVLDLDeTLVhS~ 285 (443)
++++++|+||||+...
T Consensus 3 ~~~vifDfDgTi~~~d 18 (219)
T PRK09552 3 SIQIFCDFDGTITNND 18 (219)
T ss_pred CcEEEEcCCCCCCcch
Confidence 4589999999999764
No 207
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=44.00 E-value=14 Score=34.34 Aligned_cols=16 Identities=31% Similarity=0.463 Sum_probs=13.9
Q ss_pred ceEEEEecCccccccc
Q 013428 270 SVTLVLDLDETLVHST 285 (443)
Q Consensus 270 k~tLVLDLDeTLVhS~ 285 (443)
.+.++||+||||++..
T Consensus 4 ~k~i~FD~d~TL~d~~ 19 (229)
T COG1011 4 IKAILFDLDGTLLDFD 19 (229)
T ss_pred eeEEEEecCCcccccc
Confidence 4689999999999974
No 208
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=43.80 E-value=13 Score=35.64 Aligned_cols=16 Identities=31% Similarity=0.436 Sum_probs=13.7
Q ss_pred ceEEEEecCccccccc
Q 013428 270 SVTLVLDLDETLVHST 285 (443)
Q Consensus 270 k~tLVLDLDeTLVhS~ 285 (443)
++..++|+||||++.-
T Consensus 5 ~~la~FDfDgTLt~~d 20 (210)
T TIGR01545 5 KRIIFFDLDGTLHQQD 20 (210)
T ss_pred CcEEEEcCCCCCccCc
Confidence 5678999999999874
No 209
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=42.68 E-value=14 Score=34.36 Aligned_cols=14 Identities=21% Similarity=0.437 Sum_probs=12.5
Q ss_pred EEEEecCccccccc
Q 013428 272 TLVLDLDETLVHST 285 (443)
Q Consensus 272 tLVLDLDeTLVhS~ 285 (443)
++||||||||++..
T Consensus 2 ~viFDldgvL~d~~ 15 (199)
T PRK09456 2 LYIFDLGNVIVDID 15 (199)
T ss_pred EEEEeCCCccccCc
Confidence 68999999999874
No 210
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=36.40 E-value=62 Score=35.09 Aligned_cols=53 Identities=23% Similarity=0.380 Sum_probs=40.9
Q ss_pred eEEEeeCchHHHHHHHhhhcc-EEEEEcCCcHHHHHHHHHHh-CC-------CCCeeeEEEE
Q 013428 306 TVYVKQRPHLKTFLERVAEMF-EVVIFTASQSIYAAQLLDIL-DP-------DGKLISRRVY 358 (443)
Q Consensus 306 ~~~V~~RPgL~eFLe~Lsk~Y-EIVIfTAs~~~YAd~VLd~L-DP-------~g~~f~~RL~ 358 (443)
.-||.+-|.+..+|+.|++.- .+.+-|+|...|++.+++.+ ++ +..||+.++.
T Consensus 179 ~kYi~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv 240 (448)
T PF05761_consen 179 EKYIHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIV 240 (448)
T ss_dssp CCCEE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEE
T ss_pred HHHccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEE
Confidence 347888999999999999765 89999999999999999985 55 5678877765
No 211
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=35.70 E-value=71 Score=37.83 Aligned_cols=71 Identities=15% Similarity=0.178 Sum_probs=47.4
Q ss_pred CCCceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhhc--cEEEEEcCCcHHHHHHHHH
Q 013428 267 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEM--FEVVIFTASQSIYAAQLLD 344 (443)
Q Consensus 267 ~~kk~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Lsk~--YEIVIfTAs~~~YAd~VLd 344 (443)
..++..|+||.||||+-....+...... ...+.+..-|.+.+.|+.|... ..|+|-|--...-.+.++.
T Consensus 588 ~a~~RLlfLDyDGTLap~~~~P~~~~~~---------~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg 658 (934)
T PLN03064 588 QSNNRLLILGFNATLTEPVDTPGRRGDQ---------IKEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFG 658 (934)
T ss_pred hccceEEEEecCceeccCCCCccccccc---------ccccccCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhC
Confidence 4466789999999998653222100000 0011244558899999999954 7899999988888888776
Q ss_pred Hh
Q 013428 345 IL 346 (443)
Q Consensus 345 ~L 346 (443)
.+
T Consensus 659 ~~ 660 (934)
T PLN03064 659 EF 660 (934)
T ss_pred CC
Confidence 55
No 212
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=35.17 E-value=1.1e+02 Score=28.41 Aligned_cols=66 Identities=26% Similarity=0.328 Sum_probs=35.5
Q ss_pred eCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEcccceeeCCceeecccccCCCCCcEEEEECC
Q 013428 311 QRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNS 389 (443)
Q Consensus 311 ~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~C~~~~g~yiKDLs~LgrDl~kVIIIDDs 389 (443)
.|-.+.+||+.+. +.-.|++|-|+.+.- .+|..++....++. .+||++
T Consensus 53 ~~~~l~~~L~~~~~~gk~I~~yGA~~kg~--tlln~~g~~~~~I~-----------------------------~vvD~n 101 (160)
T PF08484_consen 53 SKAELREFLEKLKAEGKRIAGYGAGAKGN--TLLNYFGLDNDLID-----------------------------YVVDDN 101 (160)
T ss_dssp HHHHHHHHHHHHHHTT--EEEE---SHHH--HHHHHHT--TTTS-------------------------------EEES-
T ss_pred HHHHHHHHHHHHHHcCCEEEEECcchHHH--HHHHHhCCCcceeE-----------------------------EEEeCC
Confidence 4556778888887 456799999987654 56777776654442 367777
Q ss_pred hhhhc-cCCCceeeecccc
Q 013428 390 PQVFR-LQVNNGIPIESWF 407 (443)
Q Consensus 390 p~s~~-~q~~NgIpI~s~~ 407 (443)
|.... +-|..+|||.+..
T Consensus 102 p~K~G~~~PGt~ipI~~p~ 120 (160)
T PF08484_consen 102 PLKQGKYLPGTHIPIVSPE 120 (160)
T ss_dssp GGGTTEE-TTT--EEEEGG
T ss_pred hhhcCcccCCCCCeECCHH
Confidence 77663 3566677776664
No 213
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=33.43 E-value=61 Score=34.79 Aligned_cols=58 Identities=16% Similarity=0.141 Sum_probs=37.7
Q ss_pred CCceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhhccEEEEEcCCc
Q 013428 268 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQ 335 (443)
Q Consensus 268 ~kk~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Lsk~YEIVIfTAs~ 335 (443)
...+.+.||||||||...... .+......|.+..++....+=..=.+.|-++|||...
T Consensus 73 ~~~K~i~FD~dgtlI~t~sg~----------vf~~~~~dw~~l~~~vp~Klktl~~~g~~l~iftnq~ 130 (422)
T KOG2134|consen 73 GGSKIIMFDYDGTLIDTKSGK----------VFPKGSMDWRILFPEVPSKLKTLYQDGIKLFIFTNQN 130 (422)
T ss_pred CCcceEEEecCCceeecCCcc----------eeeccCccceeeccccchhhhhhccCCeEEEEEeccc
Confidence 345678899999999875321 1222344566666666666544444789999998754
No 214
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=33.19 E-value=20 Score=31.93 Aligned_cols=13 Identities=31% Similarity=0.560 Sum_probs=11.0
Q ss_pred EEEecCccccccc
Q 013428 273 LVLDLDETLVHST 285 (443)
Q Consensus 273 LVLDLDeTLVhS~ 285 (443)
+|+|+||||+...
T Consensus 2 ~~fD~DgTl~~~~ 14 (177)
T TIGR01488 2 AIFDFDGTLTRQD 14 (177)
T ss_pred EEecCccccccch
Confidence 6899999999753
No 215
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=32.20 E-value=25 Score=31.62 Aligned_cols=13 Identities=38% Similarity=0.682 Sum_probs=11.3
Q ss_pred EEEecCccccccc
Q 013428 273 LVLDLDETLVHST 285 (443)
Q Consensus 273 LVLDLDeTLVhS~ 285 (443)
+|+|+||||+...
T Consensus 1 v~fD~DGTL~~~~ 13 (192)
T PF12710_consen 1 VIFDFDGTLTDSD 13 (192)
T ss_dssp EEEESBTTTBSSH
T ss_pred eEEecCcCeecCC
Confidence 5899999998875
No 216
>PRK10671 copA copper exporting ATPase; Provisional
Probab=31.18 E-value=45 Score=38.47 Aligned_cols=85 Identities=14% Similarity=0.150 Sum_probs=59.1
Q ss_pred eeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHHHHhCCCCCeeeEEEEcccceeeCCceeecccccCCCCCcEEEEEC
Q 013428 310 KQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDN 388 (443)
Q Consensus 310 ~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VLd~LDP~g~~f~~RL~Re~C~~~~g~yiKDLs~LgrDl~kVIIIDD 388 (443)
..||++.+.|+++. ..+.+++.|...+..|+.+++.++... +|.... .....+-++.++....+++.|-|
T Consensus 650 ~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~-~~~~~~--------p~~K~~~i~~l~~~~~~v~~vGD 720 (834)
T PRK10671 650 PLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE-VIAGVL--------PDGKAEAIKRLQSQGRQVAMVGD 720 (834)
T ss_pred cchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE-EEeCCC--------HHHHHHHHHHHhhcCCEEEEEeC
Confidence 56999999999998 469999999999999999999988753 332211 11112233445556678999999
Q ss_pred ChhhhccCCCceeee
Q 013428 389 SPQVFRLQVNNGIPI 403 (443)
Q Consensus 389 sp~s~~~q~~NgIpI 403 (443)
...-...-...++.|
T Consensus 721 g~nD~~al~~Agvgi 735 (834)
T PRK10671 721 GINDAPALAQADVGI 735 (834)
T ss_pred CHHHHHHHHhCCeeE
Confidence 987654433344433
No 217
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=31.16 E-value=39 Score=37.03 Aligned_cols=23 Identities=30% Similarity=0.382 Sum_probs=19.2
Q ss_pred EEEEEcCCcHHHHHHHHHH-hCCC
Q 013428 327 EVVIFTASQSIYAAQLLDI-LDPD 349 (443)
Q Consensus 327 EIVIfTAs~~~YAd~VLd~-LDP~ 349 (443)
+.+|-||+.+.|++++++. |+-+
T Consensus 124 ~~vvVSASp~~~Vepfa~~~LGid 147 (497)
T PLN02177 124 KRYIITASPRIMVEPFVKTFLGAD 147 (497)
T ss_pred CEEEEECCcHHHHHHHHHHcCCCC
Confidence 4599999999999999975 6554
No 218
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=30.04 E-value=26 Score=32.19 Aligned_cols=13 Identities=31% Similarity=0.445 Sum_probs=11.1
Q ss_pred EEEecCccccccc
Q 013428 273 LVLDLDETLVHST 285 (443)
Q Consensus 273 LVLDLDeTLVhS~ 285 (443)
.++|+||||+...
T Consensus 2 a~FD~DgTL~~~~ 14 (202)
T TIGR01490 2 AFFDFDGTLTAKD 14 (202)
T ss_pred eEEccCCCCCCCc
Confidence 6899999999853
No 219
>TIGR02826 RNR_activ_nrdG3 anaerobic ribonucleoside-triphosphate reductase activating protein. Members of this family represent a set of proteins related to, yet architecturally different from, the activating protein for the glycine radical-containing, oxygen-sensitive ribonucleoside-triphosphate reductase (RNR) as described in model TIGR02491. Members of this family are found paired with members of a similarly divergent set of anaerobic ribonucleoside-triphosphate reductases. Identification of this protein as an RNR activitating protein is partly from pairing with a candidate RNR. It is further supported by our finding that upstream of these operons are examples of a conserved regulatory element (described Rodionov and Gelfand) that is found in nearly all bacteria and that occurs specifically upstream of operons for all three classes of RNR genes.
Probab=28.96 E-value=1e+02 Score=28.21 Aligned_cols=72 Identities=22% Similarity=0.263 Sum_probs=45.6
Q ss_pred EEEecceeceEEEeeCchHHHHHHHhhh-ccEEEEEcCCcH-HHHHHHHHHhCCCCCeeeEEEEcccceeeCCceeeccc
Q 013428 297 TVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQS-IYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLT 374 (443)
Q Consensus 297 ~i~~~~~~~~~~V~~RPgL~eFLe~Lsk-~YEIVIfTAs~~-~YAd~VLd~LDP~g~~f~~RL~Re~C~~~~g~yiKDLs 374 (443)
.+.+.+.+ ..++.+.++++.+++ .+.+.|+|.+.. +--+.++..+|- ...|.|+.+|.
T Consensus 64 gVt~SGGE-----l~~~~l~~ll~~lk~~Gl~i~l~Tg~~~~~~~~~il~~iD~---------------l~~g~y~~~~~ 123 (147)
T TIGR02826 64 CVLFLGGE-----WNREALLSLLKIFKEKGLKTCLYTGLEPKDIPLELVQHLDY---------------LKTGRWIHTRG 123 (147)
T ss_pred EEEEechh-----cCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHhCCE---------------EEEChHHHHcC
Confidence 34555555 467899999999985 489999998654 233445555442 23455555555
Q ss_pred ccCCCCCcEEEEEC
Q 013428 375 VLGVDLAKVAIIDN 388 (443)
Q Consensus 375 ~LgrDl~kVIIIDD 388 (443)
.+++.-+|=.|+|-
T Consensus 124 ~~~~~~sNQ~~~~~ 137 (147)
T TIGR02826 124 GLGSPTTNQIFIDL 137 (147)
T ss_pred CCCCCCcCceEEEC
Confidence 55444457777774
No 220
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=25.97 E-value=39 Score=40.36 Aligned_cols=17 Identities=29% Similarity=0.513 Sum_probs=14.7
Q ss_pred CceEEEEecCccccccc
Q 013428 269 KSVTLVLDLDETLVHST 285 (443)
Q Consensus 269 kk~tLVLDLDeTLVhS~ 285 (443)
+-+.++|||||||+++.
T Consensus 74 ~ikaVIFDlDGTLiDS~ 90 (1057)
T PLN02919 74 KVSAVLFDMDGVLCNSE 90 (1057)
T ss_pred CCCEEEECCCCCeEeCh
Confidence 34589999999999986
No 221
>cd06537 CIDE_N_B CIDE_N domain of CIDE-B proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45 and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=25.60 E-value=1e+02 Score=26.04 Aligned_cols=16 Identities=50% Similarity=0.536 Sum_probs=13.7
Q ss_pred ceEEEEecCccccccc
Q 013428 270 SVTLVLDLDETLVHST 285 (443)
Q Consensus 270 k~tLVLDLDeTLVhS~ 285 (443)
..+|||+=|||.|.+.
T Consensus 39 ~~~lvLeeDGT~Vd~E 54 (81)
T cd06537 39 VLTLVLEEDGTAVDSE 54 (81)
T ss_pred ceEEEEecCCCEEccH
Confidence 4799999999999763
No 222
>cd06539 CIDE_N_A CIDE_N domain of CIDE-A proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45, and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, the CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=24.65 E-value=1.1e+02 Score=25.69 Aligned_cols=16 Identities=50% Similarity=0.594 Sum_probs=13.8
Q ss_pred ceEEEEecCccccccc
Q 013428 270 SVTLVLDLDETLVHST 285 (443)
Q Consensus 270 k~tLVLDLDeTLVhS~ 285 (443)
..+|||+=|||.|.+.
T Consensus 40 ~~~lvL~eDGT~Vd~E 55 (78)
T cd06539 40 LVTLVLEEDGTVVDTE 55 (78)
T ss_pred CcEEEEeCCCCEEccH
Confidence 5799999999999763
No 223
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=23.36 E-value=1.2e+02 Score=30.11 Aligned_cols=57 Identities=19% Similarity=0.317 Sum_probs=36.4
Q ss_pred CCceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhhhccEEEEE-cCCcHHHH----HHH
Q 013428 268 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIF-TASQSIYA----AQL 342 (443)
Q Consensus 268 ~kk~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Lsk~YEIVIf-TAs~~~YA----d~V 342 (443)
..+.++.+|.||||.-.. -+.-|-+.+||+.+.+...|.+- -+-..... +.|
T Consensus 9 ~~~~l~lfdvdgtLt~~r-----------------------~~~~~e~~~~l~~lr~~v~ig~VggsDl~k~~eqlG~~V 65 (252)
T KOG3189|consen 9 DEETLCLFDVDGTLTPPR-----------------------QKVTPEMLEFLQKLRKKVTIGFVGGSDLSKQQEQLGDNV 65 (252)
T ss_pred CCceEEEEecCCcccccc-----------------------ccCCHHHHHHHHHHhhheEEEEeecHHHHHHHHHhchhH
Confidence 344566679999996442 23468899999999988777643 33333333 445
Q ss_pred HHHhC
Q 013428 343 LDILD 347 (443)
Q Consensus 343 Ld~LD 347 (443)
++..|
T Consensus 66 l~~fD 70 (252)
T KOG3189|consen 66 LEEFD 70 (252)
T ss_pred Hhhhc
Confidence 55554
No 224
>cd06536 CIDE_N_ICAD CIDE_N domain of ICAD. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD (DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40 and ICAD/DFF45 during apoptosis. In normal cells, DFF exists in the nucleus as a heterodimer composed of CAD/DFF40 as a latent nuclease and its chaperone and inhibitor subunit ICAD/DFF45. Apoptotic activation of caspase-3 results in the cleavage of DFF45/ICAD and release of active DFF40/CAD nuclease.
Probab=22.94 E-value=1.2e+02 Score=25.50 Aligned_cols=17 Identities=41% Similarity=0.536 Sum_probs=14.3
Q ss_pred CceEEEEecCccccccc
Q 013428 269 KSVTLVLDLDETLVHST 285 (443)
Q Consensus 269 kk~tLVLDLDeTLVhS~ 285 (443)
...+|||+=|||.|...
T Consensus 41 ~~~~lvL~eDGT~VddE 57 (80)
T cd06536 41 APITLVLAEDGTIVEDE 57 (80)
T ss_pred CceEEEEecCCcEEccH
Confidence 45799999999999763
No 225
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=22.90 E-value=47 Score=30.17 Aligned_cols=15 Identities=20% Similarity=0.279 Sum_probs=12.4
Q ss_pred eEEEEecCccccccc
Q 013428 271 VTLVLDLDETLVHST 285 (443)
Q Consensus 271 ~tLVLDLDeTLVhS~ 285 (443)
.+++||.||||....
T Consensus 2 ~~i~fDktGTLt~~~ 16 (215)
T PF00702_consen 2 DAICFDKTGTLTQGK 16 (215)
T ss_dssp SEEEEECCTTTBESH
T ss_pred eEEEEecCCCcccCe
Confidence 378999999997754
No 226
>cd06538 CIDE_N_FSP27 CIDE_N domain of FSP27 proteins. The CIDE-N (cell death-inducing DFF45-like effector, N-terminal) domain is found in the FSP27/CIDE-C protein, which has been identified as a n adipocyte lipid droplet protein that negatively regulates lipolysis and promotes triglyceride accumulation. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. The CIDE-N domain of FSP27 is sufficient to increase apoptosis in vitro when overexpressed.
Probab=22.39 E-value=1.1e+02 Score=25.60 Aligned_cols=15 Identities=47% Similarity=0.430 Sum_probs=13.2
Q ss_pred ceEEEEecCcccccc
Q 013428 270 SVTLVLDLDETLVHS 284 (443)
Q Consensus 270 k~tLVLDLDeTLVhS 284 (443)
..+|||+-|||.|..
T Consensus 39 ~~~lvL~eDGT~Vd~ 53 (79)
T cd06538 39 ISSLVLDEDGTGVDT 53 (79)
T ss_pred ccEEEEecCCcEEcc
Confidence 379999999999976
No 227
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=22.35 E-value=84 Score=32.77 Aligned_cols=40 Identities=18% Similarity=0.287 Sum_probs=31.1
Q ss_pred EEEeeCc-hHHHHHHHhhh------ccEEEEEcCCcHHHHHHHHHHh
Q 013428 307 VYVKQRP-HLKTFLERVAE------MFEVVIFTASQSIYAAQLLDIL 346 (443)
Q Consensus 307 ~~V~~RP-gL~eFLe~Lsk------~YEIVIfTAs~~~YAd~VLd~L 346 (443)
+.++.|| ++..-|+.|.+ .++|+|+--|...-+..++...
T Consensus 6 v~ayNRp~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~~~~~v~~~ 52 (334)
T cd02514 6 VIACNRPDYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEEVADVAKSF 52 (334)
T ss_pred EEecCCHHHHHHHHHHHHhccccCCCceEEEEeCCCchHHHHHHHhh
Confidence 4578899 79999999984 4899999888776555555544
No 228
>smart00266 CAD Domains present in proteins implicated in post-mortem DNA fragmentation.
Probab=22.05 E-value=1.2e+02 Score=25.24 Aligned_cols=16 Identities=50% Similarity=0.646 Sum_probs=13.8
Q ss_pred ceEEEEecCccccccc
Q 013428 270 SVTLVLDLDETLVHST 285 (443)
Q Consensus 270 k~tLVLDLDeTLVhS~ 285 (443)
..+|||+=|||.|...
T Consensus 38 ~~~l~L~eDGT~VddE 53 (74)
T smart00266 38 PVTLVLEEDGTIVDDE 53 (74)
T ss_pred CcEEEEecCCcEEccH
Confidence 5799999999999763
No 229
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=21.87 E-value=79 Score=30.96 Aligned_cols=92 Identities=17% Similarity=0.230 Sum_probs=61.3
Q ss_pred EeeCchHHHHHHHhh-hccEEEEEcCCcHHHHHHHH----HHhCCCCCeeeEEEEccccee-eCCceeecccccCCCCCc
Q 013428 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLL----DILDPDGKLISRRVYRESCIF-SDGTYTKDLTVLGVDLAK 382 (443)
Q Consensus 309 V~~RPgL~eFLe~Ls-k~YEIVIfTAs~~~YAd~VL----d~LDP~g~~f~~RL~Re~C~~-~~g~yiKDLs~LgrDl~k 382 (443)
-.+=|.+-+++++-. ....++||++++-. |++++ +..|..+ ||+..+-...-.. ..+.|.|.+..+|..++.
T Consensus 102 ahlypDav~~ik~wk~~g~~vyiYSSGSV~-AQkL~Fghs~agdL~~-lfsGyfDttiG~KrE~~SY~kIa~~iGl~p~e 179 (229)
T COG4229 102 AHLYPDAVQAIKRWKALGMRVYIYSSGSVK-AQKLFFGHSDAGDLNS-LFSGYFDTTIGKKRESQSYAKIAGDIGLPPAE 179 (229)
T ss_pred cccCHhHHHHHHHHHHcCCcEEEEcCCCch-hHHHhhcccccccHHh-hhcceeeccccccccchhHHHHHHhcCCCchh
Confidence 344588999998887 56899999998643 44443 2334433 5655443211111 135788999999999999
Q ss_pred EEEEECChhhhccCCCceee
Q 013428 383 VAIIDNSPQVFRLQVNNGIP 402 (443)
Q Consensus 383 VIIIDDsp~s~~~q~~NgIp 402 (443)
++++-|.+.......+-|+.
T Consensus 180 ilFLSDn~~EL~AA~~vGl~ 199 (229)
T COG4229 180 ILFLSDNPEELKAAAGVGLA 199 (229)
T ss_pred eEEecCCHHHHHHHHhcchh
Confidence 99999999876554444443
No 230
>cd01615 CIDE_N CIDE_N domain, found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins, as well as CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD(DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of ICAD/DFF45, and the CAD/DFF40 and CIDE nucleases during apoptosis. The CIDE-N domain is also found in the FSP27/CIDE-C protein.
Probab=21.52 E-value=1.3e+02 Score=25.16 Aligned_cols=17 Identities=47% Similarity=0.491 Sum_probs=14.2
Q ss_pred CceEEEEecCccccccc
Q 013428 269 KSVTLVLDLDETLVHST 285 (443)
Q Consensus 269 kk~tLVLDLDeTLVhS~ 285 (443)
...+|||+-|||.|...
T Consensus 39 ~~~~lvL~eDGTeVddE 55 (78)
T cd01615 39 APVTLVLEEDGTEVDDE 55 (78)
T ss_pred CCeEEEEeCCCcEEccH
Confidence 45799999999999763
No 231
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=21.50 E-value=3.6e+02 Score=25.01 Aligned_cols=120 Identities=15% Similarity=0.094 Sum_probs=64.2
Q ss_pred CceEEEEecCcccccccccccCCCCceEEEEecceeceEEEeeCchHHHHHHHhh-hccEEEEEcCC-cHHHHHHHHHHh
Q 013428 269 KSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTAS-QSIYAAQLLDIL 346 (443)
Q Consensus 269 kk~tLVLDLDeTLVhS~~~~~~~~df~~~i~~~~~~~~~~V~~RPgL~eFLe~Ls-k~YEIVIfTAs-~~~YAd~VLd~L 346 (443)
++...++|||-||.-+-..-..++.|- ++.-.....+.-...=|....-|..|+ +.-++++.+-+ ...||.+.|+.+
T Consensus 4 ~p~~~~fdldytiwP~~vdthl~~pfk-P~k~~~g~~g~e~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~f 82 (144)
T KOG4549|consen 4 KPEAMQFDLDYTIWPRLVDTHLDYPFK-PFKCECGSKGEEMIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETF 82 (144)
T ss_pred CCceeEEeccceeeeEEEEeccccccc-ccccCcccCcceeeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHh
Confidence 345677777777643321111111110 111111223333455577888899999 45899988877 579999999998
Q ss_pred CCCCCeeeEEEEccccee---eCC---ceeecccc-cCCCCCcEEEEECCh
Q 013428 347 DPDGKLISRRVYRESCIF---SDG---TYTKDLTV-LGVDLAKVAIIDNSP 390 (443)
Q Consensus 347 DP~g~~f~~RL~Re~C~~---~~g---~yiKDLs~-LgrDl~kVIIIDDsp 390 (443)
..... +..+-..+--.+ .+| .+.|++.. =|...++..+.||..
T Consensus 83 kvk~~-Gvlkps~e~ft~~~~g~gsklghfke~~n~s~~~~k~~~~fdDes 132 (144)
T KOG4549|consen 83 KVKQT-GVLKPSLEEFTFEAVGDGSKLGHFKEFTNNSNSIEKNKQVFDDES 132 (144)
T ss_pred ccCcc-cccchhhhcCceeeecCcccchhHHHHhhccCcchhceeeecccc
Confidence 75431 111111111111 122 12355542 266778888888854
No 232
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=21.22 E-value=58 Score=30.21 Aligned_cols=16 Identities=19% Similarity=0.466 Sum_probs=12.0
Q ss_pred ceEEEEecCccccccc
Q 013428 270 SVTLVLDLDETLVHST 285 (443)
Q Consensus 270 k~tLVLDLDeTLVhS~ 285 (443)
|+.|.+|+||||....
T Consensus 2 ~i~I~iDiDgVLad~~ 17 (191)
T PF06941_consen 2 KIRIAIDIDGVLADFN 17 (191)
T ss_dssp -EEEEEESBTTTB-HH
T ss_pred CcEEEEECCCCCcccH
Confidence 4559999999999864
No 233
>PF13701 DDE_Tnp_1_4: Transposase DDE domain group 1
Probab=20.54 E-value=2.4e+02 Score=30.50 Aligned_cols=83 Identities=20% Similarity=0.340 Sum_probs=45.0
Q ss_pred CceEEEEecCccccccc--cccc------CCCCceEEEEe-cceeceEEEeeCch-------HHHHHHHhhhcc-----E
Q 013428 269 KSVTLVLDLDETLVHST--LEYC------DDADFTFTVFF-NMKEHTVYVKQRPH-------LKTFLERVAEMF-----E 327 (443)
Q Consensus 269 kk~tLVLDLDeTLVhS~--~~~~------~~~df~~~i~~-~~~~~~~~V~~RPg-------L~eFLe~Lsk~Y-----E 327 (443)
.+.-+|||+|.|..-.. .+.. ....|.--+.+ ...+.-+...+||| ..+||+.+-+.+ +
T Consensus 138 ~~~~i~LDiD~T~~~~~G~Qe~~~~n~y~g~~gY~PL~~f~g~~G~~l~a~LRpGn~~sa~g~~~fL~~~l~~lr~~~~~ 217 (448)
T PF13701_consen 138 PPKEIVLDIDSTVDDVHGEQEGAVFNTYYGEDGYHPLVAFDGQTGYLLAAELRPGNVHSAKGAAEFLKRVLRRLRQRWPD 217 (448)
T ss_pred ccceEEEecccccccchhhcccccccccCCCcccccceeccCCCCceEEEEccCCCCChHHHHHHHHHHHHHHHhhhCcc
Confidence 34688999999974332 1111 11122211222 22344566889996 567777664333 2
Q ss_pred E-EEEcCCcHHHHHHHHHHhCCCCC
Q 013428 328 V-VIFTASQSIYAAQLLDILDPDGK 351 (443)
Q Consensus 328 I-VIfTAs~~~YAd~VLd~LDP~g~ 351 (443)
. +++=+-+--+...+++.++-.|.
T Consensus 218 ~~ILvR~DSgF~~~el~~~ce~~g~ 242 (448)
T PF13701_consen 218 TRILVRGDSGFASPELMDWCEAEGV 242 (448)
T ss_pred ceEEEEecCccCcHHHHHHHHhCCC
Confidence 2 34444444466677777776663
Done!