Query 013433
Match_columns 443
No_of_seqs 201 out of 525
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 10:29:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013433.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013433hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2zws_A Neutral ceramidase; pri 100.0 7E-86 2.4E-90 715.4 32.5 338 1-438 23-362 (646)
2 1u9d_A Hypothetical protein VC 43.1 1.1E+02 0.0037 26.1 8.4 75 46-126 31-108 (122)
3 1xn9_A 30S ribosomal protein S 43.1 24 0.00082 29.3 4.2 32 47-80 31-62 (101)
4 2v94_A RPS24, 30S ribosomal pr 40.6 26 0.00089 29.4 4.0 32 47-80 40-71 (107)
5 1ywx_A 30S ribosomal protein S 39.1 31 0.001 28.8 4.2 32 47-80 31-62 (102)
6 4eyb_A Beta-lactamase NDM-1; m 38.6 54 0.0018 30.5 6.4 49 20-77 75-123 (270)
7 2g1d_A 30S ribosomal protein S 32.0 24 0.00083 29.2 2.4 32 47-80 32-63 (98)
8 1uiz_A MIF, macrophage migrati 30.8 69 0.0023 25.9 5.1 50 23-75 48-102 (115)
9 1hfo_A Migration inhibitory fa 29.8 74 0.0025 25.6 5.1 50 23-75 47-101 (113)
10 2xzm_P RPS24E; ribosome, trans 29.3 49 0.0017 29.5 4.0 32 47-80 34-65 (149)
11 3u5c_Y RP50, 40S ribosomal pro 28.3 35 0.0012 29.9 2.9 32 47-80 36-67 (135)
12 2fhx_A SPM-1; metallo-beta-lac 28.1 1.3E+02 0.0043 26.9 6.9 51 19-77 29-79 (246)
13 2xcz_A Possible ATLS1-like lig 28.0 2.3E+02 0.0079 22.6 8.4 85 44-131 16-103 (115)
14 2y8b_A Metallo-B-lactamase; hy 27.0 1.1E+02 0.0039 28.0 6.5 51 18-77 66-116 (265)
15 1n62_B Carbon monoxide dehydro 25.5 1.5E+02 0.005 32.9 8.0 107 19-130 506-613 (809)
16 3fwu_A Macrophage migration in 23.9 1.1E+02 0.0038 25.9 5.3 45 29-75 74-123 (133)
17 2dhm_A Protein BOLA; stationar 23.7 89 0.003 26.1 4.5 46 47-95 10-55 (107)
18 2wkb_A Macrophage migration in 23.4 82 0.0028 26.0 4.3 44 30-75 54-102 (125)
19 1vra_A Arginine biosynthesis b 23.0 1.2E+02 0.0042 28.3 5.7 46 19-74 89-136 (208)
20 2os5_A Acemif; macrophage migr 22.4 1E+02 0.0035 25.1 4.7 44 30-75 54-102 (119)
21 1axh_A Atracotoxin-HVI, ACTX-H 22.2 38 0.0013 23.1 1.5 20 302-321 2-21 (37)
22 3djh_A Macrophage migration in 21.8 1.1E+02 0.0038 24.8 4.8 49 22-73 46-99 (114)
23 3b64_A Macrophage migration in 21.6 98 0.0034 24.9 4.4 44 30-75 54-102 (112)
24 3t5s_A Gilaa.00834.A, macropha 21.4 1.2E+02 0.0042 25.7 5.1 43 29-73 74-121 (135)
25 3abf_A 4-oxalocrotonate tautom 20.3 1E+02 0.0034 21.8 3.7 28 46-75 19-46 (64)
26 3l6n_A Metallo-beta-lactamase; 20.2 1.2E+02 0.004 26.5 5.0 52 18-78 29-80 (219)
27 1rm6_A 4-hydroxybenzoyl-COA re 20.1 1.7E+02 0.0058 32.1 7.1 94 34-130 472-566 (769)
No 1
>2zws_A Neutral ceramidase; prism fold and beta-sandwich fold, hydrolase, lipid metaboli secreted; HET: PLM; 1.40A {Pseudomonas aeruginosa} PDB: 2zxc_A*
Probab=100.00 E-value=7e-86 Score=715.38 Aligned_cols=338 Identities=42% Similarity=0.732 Sum_probs=305.1
Q ss_pred CCcccCCCCccceeecceEEEEEEEEcCC-CCEEEEEEeccCcccHHHHHHHHHHHHHHhCCCCCCCcEEEEeeccCCCC
Q 013433 1 MMGYANMEQIASGIHFRLRARTFIVAEPQ-GNRVVFVNLDACMASQIVKIKVIERLKARYGDLYTEKNVAISGIHTHAGP 79 (443)
Q Consensus 1 m~GYa~~~q~a~GIhdrL~ARAfVl~d~~-~~rvv~Vs~Dl~~i~~~v~~~V~~~L~~~~G~~i~~~nVlIsATHTHSgP 79 (443)
||||+.+.|+++|||||||||||||++++ ++|+|||++|++++++.++++|+++|+++||++|+++||+|++|||||||
T Consensus 23 m~GYa~~~q~a~Gihd~L~aRA~vl~d~~~~~rvv~Vs~D~~~~~~~v~~~V~~~L~~~~g~~~~~~nV~isaTHTHSgP 102 (646)
T 2zws_A 23 MMGYSSLEQKTAGIHMRQWARAFVIEEAASGRRLVYVNTDLGMIFQAVHLKVLARLKAKYPGVYDENNVMLAATHTHSGP 102 (646)
T ss_dssp EESSCCTTCEEEEESSCCEEEEEEEEESSSCCEEEEEEESSSCCCHHHHHHHHHHHHHHSTTTCCTTTEEEEECCBSBEE
T ss_pred ecCccccCccccceecceEEEEEEEEcCCCCCEEEEEEECcccCCHHHHHHHHHHHHHHhCCCCChhHEEEEeeeeCCCC
Confidence 89999999999999999999999999863 79999999999999999999999999999999999999999999999999
Q ss_pred CCCccchhhhccccccchhHHHHHHHHHHHHHHHHHhcCCceEEEEEEEEeccccccCChhhhcCCChhhcCCCCCCCCC
Q 013433 80 GGYLQYVVYIVTSLGFVRQSFDALVDGIEKSVLQAHENLRPGSIFVNKGELLDASISRSPSAYLNNPASERGKYKYNVDK 159 (443)
Q Consensus 80 gg~~~~~l~~i~~~Gf~~~y~~~lvdgIveAI~~A~~nl~Pa~L~~g~g~~~~~~iNRs~~ay~~NP~~eR~~y~g~vD~ 159 (443)
++|+++.+|+++..||+++|+++|+++|++||++||++|+|++|.++++++.++++|||+.+|++|| ||.+|++++||
T Consensus 103 ~g~~~~~l~~~~~~g~~~~y~~~lv~~iv~AI~~A~~~l~pa~l~~g~g~~~~~~~NRs~~ay~~NP--er~~~~g~vD~ 180 (646)
T 2zws_A 103 GGFSHYAMYNLSVLGFQEKTFNAIVDGIVRSIERAQARLQPGRLFYGSGELRNASRNRSLLSHLKNP--DIAGYEDGIDP 180 (646)
T ss_dssp CCCCSSHHHHGGGTBCCHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSEEESCHHHHTTCS--CCTTCTTSCCC
T ss_pred cccccccccccccccccHHHHHHHHHHHHHHHHHHHhcCCcEEEEEEEEEeCcceecCChhhhhcCc--cccccCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 89999999999
Q ss_pred eeEEEEEEeCCCCcEEEEEeeeecccccCCCCccccCChHHHHHHHHHHHHhhccCCCCCcccccccCCCcccccccccc
Q 013433 160 EMTLLKFVDDQWGPVGSFNWFATHGTSMSRTNSLISGDNKGAAARFMEDWFEQSNAGHSSADELVSEGIPRRVSDIISDF 239 (443)
Q Consensus 160 ~m~vL~f~~~dG~~ig~L~~fA~HpTsl~~~N~lIS~D~~G~As~~lE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (443)
+|++|+|++.+|+++|+|+|||||||+|+++|++||+||||+++++||+.+
T Consensus 181 ~~~vL~f~~~dg~~ig~l~~fA~HpTsl~~~N~liS~D~~G~a~~~lE~~~----------------------------- 231 (646)
T 2zws_A 181 QMSVLSFVDANGELAGAISWFPVHSTSMTNANHLISPDNKGYASYHWEHDV----------------------------- 231 (646)
T ss_dssp EEEEEEEEETTCCEEEEEEECCCCBCSSCTTCCEEBCHHHHHHHHHHHHTT-----------------------------
T ss_pred ceEEEEEEeCCCCEEEEEEEEccCceecCCCCCeecCccHHHHHHHHHHHh-----------------------------
Confidence 999999999999999999999999999999999999999999999999753
Q ss_pred ccchhHHHHHhhhcCCCCCCchhhhhhhhhhhcccccccCCCCeEEEeecCCCCCCCCCCCCccccCCCCCCCCCCCccC
Q 013433 240 RNNHHELLELAASFQSPPGKAATKILSVARRVRGILREAEKPGFVSAFCQSNCGDVSPNVLGAFCIDSGLPCDFNHSTCG 319 (443)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~FVaafaqsn~GDvSPN~~g~~c~d~g~~c~~~~s~c~ 319 (443)
++.++|||+|+|+|+||||||+.
T Consensus 232 --------------------------------------~~~~~fva~F~qg~~GDvsP~~~------------------- 254 (646)
T 2zws_A 232 --------------------------------------SRKSGFVAAFAQTNAGNLSPNLN------------------- 254 (646)
T ss_dssp --------------------------------------CCSTTCEEEEECSSCTTEEECCC-------------------
T ss_pred --------------------------------------CCCCCeEEEEeccCcccCCcccc-------------------
Confidence 12367999999999999999985
Q ss_pred CCCcccccCCCCCCCCchhHHHHHHHHHHHHHHHHhhcCcccccceeeEEEeeecceeEEecCCCCCCCCcccCCccccC
Q 013433 320 GKNEMCYGRGPGYPDEFESTRIIGERQFRKAVDLFNKASEKLEGKIDYRHSYLDFSQLEVTIPKQNGGSETVKTCPAAMG 399 (443)
Q Consensus 320 g~~~~c~~~GP~~~d~~~s~~iig~rq~~~a~~l~~~~~~~l~g~v~~~~~~vdm~~~~v~~~~~~~~~~~~~tc~~a~G 399 (443)
.|+++||++ ++|+++++||++|+++|+++|+++.++|+|+|+++|+||||++++|.+ .++ ++...+||++|||
T Consensus 255 ----~~~~~Gp~~-~~~e~~~~iG~~~~~~a~~~l~~~~~~l~g~v~~~~~~vdm~~~~v~~-~~~-~g~~~~tc~~a~g 327 (646)
T 2zws_A 255 ----LKPGSGPFD-NEFDNTREIGLRQFAKAYEIAGQAQEEVLGELDSRFRFVDFTRLPIRP-EFT-DGQPRQLCTAAIG 327 (646)
T ss_dssp ----CCTTCCTTS-CHHHHHHHHHHHHHHHHHHHHHHCCEEECSCEEEEEEEEECTTCEECG-GGS-SSSCEECCCCCEE
T ss_pred ----ccccCCCCc-ccHHHHHHHHHHHHHHHHHHHhhccccccCCcceEEEEecCcceeeec-ccC-Ccccceechhhhc
Confidence 377899996 999999999999999999999988899999999999999999999984 444 6678999999999
Q ss_pred ccccccC-CCCCCCCCCcCCCCCccCCchhhhhhceeeec
Q 013433 400 FAFAAGT-TDGPGAFDFTQGDDKVTYNCFIHGFRIVLCCL 438 (443)
Q Consensus 400 ~sfaaGt-~DGpg~~~f~qg~~~~~~~~~~~~~~~~~~~~ 438 (443)
++|+||| +||||.|+|+|| + ||||+.+|.+|.-+
T Consensus 328 ~s~aag~~~dgpg~~~f~q~-~----~~~w~~~~~~l~~~ 362 (646)
T 2zws_A 328 TSLAAGSTEDGPGPLGLEEG-N----NPFLSALGGLLTGV 362 (646)
T ss_dssp C---------------CCSS-C----CHHHHHTTCSCCCC
T ss_pred hhhhcCCcccCCCccccccc-c----chhhhhhhhhhccc
Confidence 9999999 999999999999 4 99999998876543
No 2
>1u9d_A Hypothetical protein VC0714; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics; 1.70A {Vibrio cholerae o1 biovar eltor str} SCOP: d.80.1.5
Probab=43.07 E-value=1.1e+02 Score=26.14 Aligned_cols=75 Identities=13% Similarity=0.077 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcEEEEe---eccCCCCCCCccchhhhccccccchhHHHHHHHHHHHHHHHHHhcCCceE
Q 013433 46 IVKIKVIERLKARYGDLYTEKNVAISG---IHTHAGPGGYLQYVVYIVTSLGFVRQSFDALVDGIEKSVLQAHENLRPGS 122 (443)
Q Consensus 46 ~v~~~V~~~L~~~~G~~i~~~nVlIsA---THTHSgPgg~~~~~l~~i~~~Gf~~~y~~~lvdgIveAI~~A~~nl~Pa~ 122 (443)
.+...+.+.|++..+ .+.+++-|-. +.-|.| . .+.+..+.-.|=.++-.+.++..|.+++.++....+-+.
T Consensus 31 ~lS~~Lid~La~i~~--~~~e~fTle~i~s~~i~~G-~---~MP~VeV~~fgRt~EqK~~la~~IT~av~~~~~~~e~V~ 104 (122)
T 1u9d_A 31 SLVPTLLNELSSLLS--TARNAFTFELINTQYFAEG-G---VYPMVEVLWFGREQQTQDQIAQVITDQIRQLLGADSHLA 104 (122)
T ss_dssp HHHHHHHHHHHHHHT--CCGGGCEEEECCCCCCCTT-C---CCCEEEEEESCCCHHHHHHHHHHHHHHHHHHHCTTCCCE
T ss_pred HHhHHHHHHHHHHHC--CCcccEEEEEeeeEEEecC-C---CCCEEEEEEcCCCHHHHHHHHHHHHHHHHHhCCCCceEE
Confidence 455667788888888 8999887654 444556 2 122223322344678888999999999999954444566
Q ss_pred EEEE
Q 013433 123 IFVN 126 (443)
Q Consensus 123 L~~g 126 (443)
+-+.
T Consensus 105 Vif~ 108 (122)
T 1u9d_A 105 VVFI 108 (122)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6655
No 3
>1xn9_A 30S ribosomal protein S24E; beta+alpha, GFT structural genomics, protein structure initiative, PSI, NESG, MAR11; NMR {Methanosarcina mazei} SCOP: d.12.1.3
Probab=43.06 E-value=24 Score=29.35 Aligned_cols=32 Identities=22% Similarity=0.164 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEeeccCCCCC
Q 013433 47 VKIKVIERLKARYGDLYTEKNVAISGIHTHAGPG 80 (443)
Q Consensus 47 v~~~V~~~L~~~~G~~i~~~nVlIsATHTHSgPg 80 (443)
-+.+|+++|++.|+ .+++.|+|-.-.||-|-+
T Consensus 31 sk~eirekLAk~~~--~~~~~Vvv~~~~t~fG~g 62 (101)
T 1xn9_A 31 SRNDVRNKLAAMLN--APLELLVIQRIKTEYGMQ 62 (101)
T ss_dssp CHHHHHHHHHHHTT--CCTTTEEEEEEEECSSSS
T ss_pred CHHHHHHHHHHHHC--CCCCEEEEEeeEecCCCc
Confidence 37899999999999 899999999999999986
No 4
>2v94_A RPS24, 30S ribosomal protein S24E; ribonucleoprotein; 1.90A {Pyrococcus abyssi} SCOP: d.12.1.3
Probab=40.63 E-value=26 Score=29.45 Aligned_cols=32 Identities=19% Similarity=0.137 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEeeccCCCCC
Q 013433 47 VKIKVIERLKARYGDLYTEKNVAISGIHTHAGPG 80 (443)
Q Consensus 47 v~~~V~~~L~~~~G~~i~~~nVlIsATHTHSgPg 80 (443)
-+.+|+++|++.|+ .+++.|+|-.-.||-|-+
T Consensus 40 sk~eirekLA~~~~--~~~d~Vvv~~~~T~fG~g 71 (107)
T 2v94_A 40 SRKDVKGKLVAMLD--LNPETTVIQYIRSYFGSY 71 (107)
T ss_dssp CHHHHHHHHHHHHT--CCGGGEEEEEEECCTTCS
T ss_pred CHHHHHHHHHHHHC--CCCCEEEEEeeEecCCCc
Confidence 48899999999999 899999999999999886
No 5
>1ywx_A 30S ribosomal protein S24E; GFT MRR16, nesgc, structural genomics, PSI, protein structure initiative; NMR {Methanococcus maripaludis} SCOP: d.12.1.3
Probab=39.08 E-value=31 Score=28.79 Aligned_cols=32 Identities=13% Similarity=0.043 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEeeccCCCCC
Q 013433 47 VKIKVIERLKARYGDLYTEKNVAISGIHTHAGPG 80 (443)
Q Consensus 47 v~~~V~~~L~~~~G~~i~~~nVlIsATHTHSgPg 80 (443)
-+.+|+++|++.|+ .+++.|+|-.-.||-|-+
T Consensus 31 sk~eirekLAk~~~--~~~d~Vvv~~~~T~fG~g 62 (102)
T 1ywx_A 31 SIKDVKMKLVAVLN--ANKQVLVVDTLDQIFGKL 62 (102)
T ss_dssp CHHHHHHHHHHHHT--SCSTTEEEEEEEECSSSS
T ss_pred CHHHHHHHHHHHHC--CCCCEEEEEccEecCCCc
Confidence 37899999999999 899999999999999986
No 6
>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=38.63 E-value=54 Score=30.51 Aligned_cols=49 Identities=16% Similarity=0.256 Sum_probs=33.2
Q ss_pred EEEEEEEcCCCCEEEEEEeccCcccHHHHHHHHHHHHHHhCCCCCCCcEEEEeeccCC
Q 013433 20 ARTFIVAEPQGNRVVFVNLDACMASQIVKIKVIERLKARYGDLYTEKNVAISGIHTHA 77 (443)
Q Consensus 20 ARAfVl~d~~~~rvv~Vs~Dl~~i~~~v~~~V~~~L~~~~G~~i~~~nVlIsATHTHS 77 (443)
+-++++.++ +.+ |.+|..+ ..+..+++++.|++..+ .+...|+ .||.|.
T Consensus 75 ~N~ylv~~~--~~~--ilIDtg~-~~~~~~~l~~~i~~~~~--~~I~~Ii--~TH~H~ 123 (270)
T 4eyb_A 75 SNGLIVRDG--GRV--LVVDTAW-TDDQTAQILNWIKQEIN--LPVALAV--VTHAHQ 123 (270)
T ss_dssp EEEEEEEET--TEE--EEESCCS-SHHHHHHHHHHHHHHTC--CCEEEEE--ECSSSH
T ss_pred eEEEEEEEC--CEE--EEEeCCC-CHHHHHHHHHHHHHhcC--CceEEEE--eCCCCh
Confidence 557777663 444 4468764 56667888899988887 5555555 578875
No 7
>2g1d_A 30S ribosomal protein S24E; complete proteome, ribosome; NMR {Thermoplasma acidophilum} SCOP: d.12.1.3
Probab=32.01 E-value=24 Score=29.17 Aligned_cols=32 Identities=13% Similarity=0.159 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEeeccCCCCC
Q 013433 47 VKIKVIERLKARYGDLYTEKNVAISGIHTHAGPG 80 (443)
Q Consensus 47 v~~~V~~~L~~~~G~~i~~~nVlIsATHTHSgPg 80 (443)
-+.+|+++|++.|+ .+++.|+|-.-.||-|-+
T Consensus 32 sk~eirekLA~~~~--~~~~~vvv~~~~t~fG~g 63 (98)
T 2g1d_A 32 SREEIKELIAKHEG--VDKELVIVDNNKQLTGKH 63 (98)
T ss_dssp CHHHHHHHHHHHHH--SCSTTEECCCCCCCSSSS
T ss_pred CHHHHHHHHHHHHC--CCCCEEEEEeeEecCCCc
Confidence 48899999999999 899999999999999986
No 8
>1uiz_A MIF, macrophage migration inhibitory factor; cytokine, tautomerase; 2.50A {Xenopus laevis} SCOP: d.80.1.3
Probab=30.84 E-value=69 Score=25.92 Aligned_cols=50 Identities=8% Similarity=0.004 Sum_probs=35.8
Q ss_pred EEEEcCCCCEEEEEEeccCc-ccHH----HHHHHHHHHHHHhCCCCCCCcEEEEeecc
Q 013433 23 FIVAEPQGNRVVFVNLDACM-ASQI----VKIKVIERLKARYGDLYTEKNVAISGIHT 75 (443)
Q Consensus 23 fVl~d~~~~rvv~Vs~Dl~~-i~~~----v~~~V~~~L~~~~G~~i~~~nVlIsATHT 75 (443)
+++.. .....++|.+.+.. ...+ +..++-+.|++.+| +++++|.|.-+-.
T Consensus 48 ~~~~g-~~~~~~~v~i~~~~g~~~eqk~~l~~~i~~~l~~~lg--i~~~~v~I~~~e~ 102 (115)
T 1uiz_A 48 MSFGD-STDPCAVCSLCSIGKIGGPQNKSYTKLLCDILTKQLN--IPANRVYINYYDL 102 (115)
T ss_dssp EEETT-BCSSCEEEEEEESSCCSHHHHHHHHHHHHHHHHHHHC--CCGGGEEEEEEEC
T ss_pred eEECC-CCCCeEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhC--cCcceEEEEEEEC
Confidence 34433 35678899988775 5555 55666777788899 9999999986543
No 9
>1hfo_A Migration inhibitory factor; tautomerase; 1.65A {Trichinella spiralis} SCOP: d.80.1.3
Probab=29.81 E-value=74 Score=25.58 Aligned_cols=50 Identities=14% Similarity=0.171 Sum_probs=35.9
Q ss_pred EEEEcCCCCEEEEEEeccCc-ccHH----HHHHHHHHHHHHhCCCCCCCcEEEEeecc
Q 013433 23 FIVAEPQGNRVVFVNLDACM-ASQI----VKIKVIERLKARYGDLYTEKNVAISGIHT 75 (443)
Q Consensus 23 fVl~d~~~~rvv~Vs~Dl~~-i~~~----v~~~V~~~L~~~~G~~i~~~nVlIsATHT 75 (443)
+++.. .....++|.+-+.. ...+ +..++-+.|++.+| +++++|.|.-+-.
T Consensus 47 ~~~~g-~~~~~~~i~i~~~~g~~~eqk~~l~~~i~~~l~~~lg--i~~~~v~I~~~e~ 101 (113)
T 1hfo_A 47 LSFGG-STNPAAFGTLMSIGGIEPSRNRDHSAKLFDHLNTKLG--IPKNRMYIHFVNL 101 (113)
T ss_dssp EEETT-BCSSCEEEEEEESSSCSHHHHHHHHHHHHHHHHHHHC--CCGGGEEEEEEEC
T ss_pred EEecC-CCCCeEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhC--cCcCeEEEEEEEC
Confidence 44433 34678898888765 5555 56667777788899 9999999976543
No 10
>2xzm_P RPS24E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_P
Probab=29.27 E-value=49 Score=29.46 Aligned_cols=32 Identities=31% Similarity=0.434 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEeeccCCCCC
Q 013433 47 VKIKVIERLKARYGDLYTEKNVAISGIHTHAGPG 80 (443)
Q Consensus 47 v~~~V~~~L~~~~G~~i~~~nVlIsATHTHSgPg 80 (443)
-..+|++.|++.|+ .+++.|+|-.-.||-|-+
T Consensus 34 Sk~eIrekLAkmy~--~~~d~VvV~g~rT~fGgg 65 (149)
T 2xzm_P 34 SKEKIREELAKQLK--VDARNVVVYGFSTQYGGG 65 (149)
T ss_dssp CHHHHHHHHHHHHT--CCGGGEEEEEECCCSSSS
T ss_pred CHHHHHHHHHHHHC--CCCCEEEEEeeEecCCCc
Confidence 37799999999999 899999999999999986
No 11
>3u5c_Y RP50, 40S ribosomal protein S24-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_U* 3j16_D 3u5g_Y
Probab=28.27 E-value=35 Score=29.86 Aligned_cols=32 Identities=28% Similarity=0.404 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEeeccCCCCC
Q 013433 47 VKIKVIERLKARYGDLYTEKNVAISGIHTHAGPG 80 (443)
Q Consensus 47 v~~~V~~~L~~~~G~~i~~~nVlIsATHTHSgPg 80 (443)
-..+|+++|++.|+ .+++.|+|-.-.||-|-+
T Consensus 36 sr~eIrekLAk~y~--~~~d~VvV~g~rT~fG~g 67 (135)
T 3u5c_Y 36 SKDELREKLAEVYK--AEKDAVSVFGFRTQFGGG 67 (135)
T ss_dssp CHHHHHHHHHTTTT--SCGGGEEEEEEEECTTSS
T ss_pred CHHHHHHHHHHHHC--CCCCEEEEEeeEeccCCc
Confidence 38899999999999 899999999999999986
No 12
>2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistanc hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa}
Probab=28.14 E-value=1.3e+02 Score=26.85 Aligned_cols=51 Identities=12% Similarity=0.161 Sum_probs=31.9
Q ss_pred EEEEEEEEcCCCCEEEEEEeccCcccHHHHHHHHHHHHHHhCCCCCCCcEEEEeeccCC
Q 013433 19 RARTFIVAEPQGNRVVFVNLDACMASQIVKIKVIERLKARYGDLYTEKNVAISGIHTHA 77 (443)
Q Consensus 19 ~ARAfVl~d~~~~rvv~Vs~Dl~~i~~~v~~~V~~~L~~~~G~~i~~~nVlIsATHTHS 77 (443)
...+++|..+ +.+. |-+|.+. .....+.+++.|++.++ ...+.|--||.|.
T Consensus 29 ~~n~~li~~~-~~~~--iLiD~G~-~~~~~~~l~~~l~~~~~----~~~~~vi~TH~H~ 79 (246)
T 2fhx_A 29 SSNVLVAKML-DGTV--VIVSSPF-ENLGTQTLMDWVAKTMK----PKKVVAINTHFHL 79 (246)
T ss_dssp TEEEEEEECT-TSEE--EEESCCS-SHHHHHHHHHHHHHHHC----CSEEEEECCSSSH
T ss_pred CCCEEEEEeC-CCeE--EEEeCCC-CHHHHHHHHHHHHHhcC----CCcEEEEeCCCCc
Confidence 4678888764 3444 3467654 34455677778877556 3345566899886
No 13
>2xcz_A Possible ATLS1-like light-inducible protein; cytokine, tautomerase, immune system, cyanobacterium; 1.64A {Prochlorococcus marinus}
Probab=28.04 E-value=2.3e+02 Score=22.62 Aligned_cols=85 Identities=13% Similarity=0.073 Sum_probs=54.4
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCcEEEEeeccCC-CCCCCccc-hhhhcccc-ccchhHHHHHHHHHHHHHHHHHhcCCc
Q 013433 44 SQIVKIKVIERLKARYGDLYTEKNVAISGIHTHA-GPGGYLQY-VVYIVTSL-GFVRQSFDALVDGIEKSVLQAHENLRP 120 (443)
Q Consensus 44 ~~~v~~~V~~~L~~~~G~~i~~~nVlIsATHTHS-gPgg~~~~-~l~~i~~~-Gf~~~y~~~lvdgIveAI~~A~~nl~P 120 (443)
...+.+++-+.|++.+| .|++.|++.-..... .++|.... .+..+... |..++--+.+...|.+++.+.. ...|
T Consensus 16 ~~~l~~~~~~~l~~~lg--kp~~~~~v~~~~~~~~~~~g~~~~~~~v~i~~~~g~t~eqk~~l~~~i~~~l~~~l-gi~~ 92 (115)
T 2xcz_A 16 ANSLLQELSSKLAELLG--KPEKYVMTSLQCGVPMTFSGNTEPTCYVEVKSIGALDGSRTQEVSELVCGHIEQNL-GIPA 92 (115)
T ss_dssp HHHHHHHHHHHHHHHHT--CCGGGCEEEEECSCCCCBTTBCSSCEEEEEEESSCCCTTHHHHHHHHHHHHHHHHH-CCCG
T ss_pred HHHHHHHHHHHHHHHHC--CChHHEEEEEECCCceEECCCCCcEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHh-CcCc
Confidence 35677788888888999 899988887543221 33332221 22233333 4667777888888888888765 6677
Q ss_pred eEEEEEEEEec
Q 013433 121 GSIFVNKGELL 131 (443)
Q Consensus 121 a~L~~g~g~~~ 131 (443)
-++.+.-.+.+
T Consensus 93 ~~v~I~~~e~~ 103 (115)
T 2xcz_A 93 DRIYIGFEDVP 103 (115)
T ss_dssp GGEEEEEEECC
T ss_pred ccEEEEEEECC
Confidence 67666655653
No 14
>2y8b_A Metallo-B-lactamase; hydrolase, cephalosporins, antibiotic recognition; 1.70A {Pseudomonas aeruginosa} PDB: 2y8a_A 2y87_A 2yz3_A* 2whg_A* 2wrs_A* 1ko3_A 1ko2_A
Probab=26.97 E-value=1.1e+02 Score=28.05 Aligned_cols=51 Identities=12% Similarity=0.275 Sum_probs=31.2
Q ss_pred eEEEEEEEEcCCCCEEEEEEeccCcccHHHHHHHHHHHHHHhCCCCCCCcEEEEeeccCC
Q 013433 18 LRARTFIVAEPQGNRVVFVNLDACMASQIVKIKVIERLKARYGDLYTEKNVAISGIHTHA 77 (443)
Q Consensus 18 L~ARAfVl~d~~~~rvv~Vs~Dl~~i~~~v~~~V~~~L~~~~G~~i~~~nVlIsATHTHS 77 (443)
....+++|+.+ .+. |-+|...- .....++.+.|++..| ++.+. |--||.|.
T Consensus 66 ~~~n~~li~~~--~~~--iLID~G~~-~~~~~~l~~~l~~~~g--~~i~~--VilTH~H~ 116 (265)
T 2y8b_A 66 YSSNGLIVRDA--DEL--LLIDTAWG-AKNTVALLAEIEKQIG--LPVTR--SISTHFHD 116 (265)
T ss_dssp EEEEEEEEEET--TEE--EEESCCSS-HHHHHHHHHHHHHHTC--SCEEE--EECSSSSH
T ss_pred ccceEEEEEEC--CeE--EEEeCCCC-HHHHHHHHHHHHHhcC--CCeEE--EEeCCCCh
Confidence 34677777763 443 34687753 3345667788887667 54444 44578774
No 15
>1n62_B Carbon monoxide dehydrogenase large chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.41.1.1 d.133.1.1 PDB: 1n5w_B* 1n61_B* 1n60_B* 1n63_B* 1zxi_B*
Probab=25.46 E-value=1.5e+02 Score=32.86 Aligned_cols=107 Identities=12% Similarity=0.119 Sum_probs=66.3
Q ss_pred EEEEEEEEcCCCCEEEEEEeccCcccHHHHHHHHHHHHHHhCCCCCCCcEEEEeeccCCCCCCCccchhhhccccc-cch
Q 013433 19 RARTFIVAEPQGNRVVFVNLDACMASQIVKIKVIERLKARYGDLYTEKNVAISGIHTHAGPGGYLQYVVYIVTSLG-FVR 97 (443)
Q Consensus 19 ~ARAfVl~d~~~~rvv~Vs~Dl~~i~~~v~~~V~~~L~~~~G~~i~~~nVlIsATHTHSgPgg~~~~~l~~i~~~G-f~~ 97 (443)
++.|.|--+.+++ +.|..-..-+.|.....+.+.+++.+| ++.++|-|..+-|...|.+...+---.....| ...
T Consensus 506 ~~~a~v~l~~DG~--v~v~~g~~e~GqG~~T~~aQiaAe~LG--ip~e~V~v~~~DT~~~p~~~~t~aSr~t~~~G~Av~ 581 (809)
T 1n62_B 506 FDSAEIRIHPTGS--VIARMGTKSQGQGHETTYAQIIATELG--IPADDIMIEEGNTDTAPYGLGTYGSRSTPTAGAATA 581 (809)
T ss_dssp CEEEEEEECTTSC--EEEEESCCCSSSCHHHHHHHHHHHHHT--CCGGGEEEECCBTTTSCCCCCSCTTCTTTTHHHHHH
T ss_pred cccEEEEEecCCe--EEEEECCCCCCCCHHHHHHHHHHHHhC--CCHHHEEEecCCCCCCCCCCCcccchHHHHHHHHHH
Confidence 4555554443233 666777788888889999999999999 99999999999999888543321100111111 344
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCceEEEEEEEEe
Q 013433 98 QSFDALVDGIEKSVLQAHENLRPGSIFVNKGEL 130 (443)
Q Consensus 98 ~y~~~lvdgIveAI~~A~~nl~Pa~L~~g~g~~ 130 (443)
.-.+.|.+++.+...+.+ ...|-.|.+..|.+
T Consensus 582 ~Aa~~l~~~l~~~aa~~l-~~~~~~l~~~~g~v 613 (809)
T 1n62_B 582 VAARKIKAKAQMIAAHML-EVHEGDLEWDVDRF 613 (809)
T ss_dssp HHHHHHHHHHHHHHHHHH-TSCGGGEEECSSEE
T ss_pred HHHHHHHHHHHHHHHHHh-CCCHHHEEEeCCEE
Confidence 455566666655444332 34555566655544
No 16
>3fwu_A Macrophage migration inhibitory factor-like protein; homotrimer, tautomerase, cytokine; 1.80A {Leishmania major}
Probab=23.87 E-value=1.1e+02 Score=25.90 Aligned_cols=45 Identities=13% Similarity=0.124 Sum_probs=36.4
Q ss_pred CCCEEEEEEeccCccc-----HHHHHHHHHHHHHHhCCCCCCCcEEEEeecc
Q 013433 29 QGNRVVFVNLDACMAS-----QIVKIKVIERLKARYGDLYTEKNVAISGIHT 75 (443)
Q Consensus 29 ~~~rvv~Vs~Dl~~i~-----~~v~~~V~~~L~~~~G~~i~~~nVlIsATHT 75 (443)
.....++|.+-.++.- ..+..++-+.|++++| |++++|+|.-+=.
T Consensus 74 s~dP~a~v~i~sig~~~~e~n~~~s~~i~~~l~~~Lg--I~~~riyI~f~d~ 123 (133)
T 3fwu_A 74 STDPVACVRVEALGGYGPSEPEKVTSIVTAAITKECG--IVADRIFVLYFSP 123 (133)
T ss_dssp BCSSCEEEEEECTTCCCTTHHHHHHHHHHHHHHHHHC--CCGGGEEEEEECC
T ss_pred cCCCEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhC--cChhhEEEEEEEH
Confidence 3577899999876542 3677888888999999 9999999987766
No 17
>2dhm_A Protein BOLA; stationary-phase, stress-induced, morphogene, structural GEN NPPSFA; NMR {Escherichia coli str}
Probab=23.65 E-value=89 Score=26.07 Aligned_cols=46 Identities=17% Similarity=0.223 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEeeccCCCCCCCccchhhhcccccc
Q 013433 47 VKIKVIERLKARYGDLYTEKNVAISGIHTHAGPGGYLQYVVYIVTSLGF 95 (443)
Q Consensus 47 v~~~V~~~L~~~~G~~i~~~nVlIsATHTHSgPgg~~~~~l~~i~~~Gf 95 (443)
+.++|+++|++.+. +..=-++--+|-|++|+|-..++--.+.+.-|
T Consensus 10 ~~~~I~~~L~~~l~---p~~l~V~d~S~~H~~~~G~gsHf~v~IVS~~F 55 (107)
T 2dhm_A 10 IRERIEEKLRAAFQ---PVFLEVVDESYRHNVPAGSESHFKVVLVSDRF 55 (107)
T ss_dssp HHHHHHHHHHHHTC---CSCCEEEECCCCCSSCCCSCCCEEEEEECGGG
T ss_pred HHHHHHHHHHhcCC---CcEEEEEECcccccCCCCCCceEEEEEEchhh
Confidence 45889999998876 33344566899999998754444333333333
No 18
>2wkb_A Macrophage migration inhibitory factor; cytokine; HET: CME; 1.78A {Plasmodium berghei} PDB: 3gad_A 3gac_A 2wkf_A*
Probab=23.38 E-value=82 Score=26.05 Aligned_cols=44 Identities=16% Similarity=0.160 Sum_probs=32.1
Q ss_pred CCEEEEEEeccCc-ccH----HHHHHHHHHHHHHhCCCCCCCcEEEEeecc
Q 013433 30 GNRVVFVNLDACM-ASQ----IVKIKVIERLKARYGDLYTEKNVAISGIHT 75 (443)
Q Consensus 30 ~~rvv~Vs~Dl~~-i~~----~v~~~V~~~L~~~~G~~i~~~nVlIsATHT 75 (443)
....++|.+.+.. ... .+..++-+.|++.+| +++++|.|.-+-.
T Consensus 54 ~dp~~~v~I~~~~g~t~eqk~~l~~~i~~~l~~~lg--i~~~~v~I~~~e~ 102 (125)
T 2wkb_A 54 NEGYCFVRLTSIGGINRSNNSLLADKITKILSNHLS--VKPRRVYIEFRDC 102 (125)
T ss_dssp CSSCEEEEEECC-----CTHHHHHHHHHHHHHHHHC--CCGGGEEEEEEC-
T ss_pred CCCcEEEEEEECCCCCHHHHHHHHHHHHHHHHHHhC--cCcceEEEEEEEC
Confidence 4678888888765 333 467778888888999 9999999987644
No 19
>1vra_A Arginine biosynthesis bifunctional protein ARGJ; 10175521, S genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.00A {Bacillus halodurans}
Probab=23.05 E-value=1.2e+02 Score=28.28 Aligned_cols=46 Identities=15% Similarity=0.174 Sum_probs=33.1
Q ss_pred EEEEEEEEcCCCCEEEEEEeccCcccH--HHHHHHHHHHHHHhCCCCCCCcEEEEeec
Q 013433 19 RARTFIVAEPQGNRVVFVNLDACMASQ--IVKIKVIERLKARYGDLYTEKNVAISGIH 74 (443)
Q Consensus 19 ~ARAfVl~d~~~~rvv~Vs~Dl~~i~~--~v~~~V~~~L~~~~G~~i~~~nVlIsATH 74 (443)
.+||+|+..+ ..-.+...+ +-..++.+.+++.+| +++++|++++|=
T Consensus 89 ~~rAvvvNSG--------nANA~TG~~G~~da~~~a~~~A~~lg--i~~~~VlvaSTG 136 (208)
T 1vra_A 89 KLQAMIVNSG--------IANACTGKRGLDDAYTMRAVGAETFH--IPEHYVAVTSTG 136 (208)
T ss_dssp EEEEEEEEEE--------ECCCSCHHHHHHHHHHHHHHHHHHHT--SCGGGEEEEEEE
T ss_pred ceEEEEEccC--------CccccccHHHHHHHHHHHHHHHHHhC--CChhHEEEeCCc
Confidence 4678887665 123343333 446688899999999 999999999983
No 20
>2os5_A Acemif; macrophage migration inhibitory factor, cytokine, nematode,; 1.60A {Ancylostoma ceylanicum} PDB: 3rf4_A* 3rf5_A*
Probab=22.43 E-value=1e+02 Score=25.07 Aligned_cols=44 Identities=14% Similarity=0.101 Sum_probs=33.8
Q ss_pred CCEEEEEEeccCc-ccHH----HHHHHHHHHHHHhCCCCCCCcEEEEeecc
Q 013433 30 GNRVVFVNLDACM-ASQI----VKIKVIERLKARYGDLYTEKNVAISGIHT 75 (443)
Q Consensus 30 ~~rvv~Vs~Dl~~-i~~~----v~~~V~~~L~~~~G~~i~~~nVlIsATHT 75 (443)
....++|.+.+.. ...+ +..++-+.|++.+| +++++|.|.-+-.
T Consensus 54 ~~~~~~i~I~~~~g~~~eqk~~l~~~i~~~l~~~lg--i~~~~v~I~~~e~ 102 (119)
T 2os5_A 54 RNPVAVIKVESIGALSADDNIRHTQKITQFCQDTLK--LPKDKVIITYFDL 102 (119)
T ss_dssp CSSCEEEEEEESSCCCHHHHHHHHHHHHHHHHHHHC--CCGGGEEEEEEEC
T ss_pred CCCeEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhC--cCcccEEEEEEEC
Confidence 4678999999775 5555 55666677788899 9999999987654
No 21
>1axh_A Atracotoxin-HVI, ACTX-HVI; neurotoxin, insecticidal toxin, cystine knot, funnel-WEB; NMR {Hadronyche versuta} SCOP: g.3.6.2
Probab=22.21 E-value=38 Score=23.07 Aligned_cols=20 Identities=40% Similarity=0.986 Sum_probs=16.5
Q ss_pred ccccCCCCCCCCCCCccCCC
Q 013433 302 AFCIDSGLPCDFNHSTCGGK 321 (443)
Q Consensus 302 ~~c~d~g~~c~~~~s~c~g~ 321 (443)
+-|+-+|.||-++.+-|.+.
T Consensus 2 ~~C~psgQPCpyne~CCs~s 21 (37)
T 1axh_A 2 PTCIPSGQPCPYNENCCSQS 21 (37)
T ss_dssp CCSBCTTSBCSSGGGBSSSC
T ss_pred CccccCCCcCCCcccccccc
Confidence 45889999999999977653
No 22
>3djh_A Macrophage migration inhibitory factor; homotrimer, cytokine, inflammatory response, isomerase, phosphoprotein; 1.25A {Homo sapiens} SCOP: d.80.1.3 PDB: 1ca7_A* 1ljt_A* 2ooh_A* 2ooz_A* 3b9s_A* 2oow_A* 3ce4_A 3dji_A* 3ijg_A* 3ijj_A* 3smb_A* 3smc_A* 3u18_A* 4f2k_A* 1gd0_A* 1gcz_A* 3jsf_A* 3jsg_A* 3jtu_A* 3l5p_A* ...
Probab=21.79 E-value=1.1e+02 Score=24.82 Aligned_cols=49 Identities=10% Similarity=0.025 Sum_probs=36.0
Q ss_pred EEEEEcCCCCEEEEEEeccCcc-cH----HHHHHHHHHHHHHhCCCCCCCcEEEEee
Q 013433 22 TFIVAEPQGNRVVFVNLDACMA-SQ----IVKIKVIERLKARYGDLYTEKNVAISGI 73 (443)
Q Consensus 22 AfVl~d~~~~rvv~Vs~Dl~~i-~~----~v~~~V~~~L~~~~G~~i~~~nVlIsAT 73 (443)
.+.+.. .....+++.+-.++. .. .+..++-+.|++++| +++++|.|.-.
T Consensus 46 ~m~fgG-s~~P~a~~~v~sig~~~~~~n~~~s~~i~~~l~~~Lg--i~~~riyI~f~ 99 (114)
T 3djh_A 46 LMAFGG-SSEPCALCSLHSIGKIGGAQNRSYSKLLCGLLAERLR--ISPDRVYINYY 99 (114)
T ss_dssp EEEETT-BCSSCEEEEEEESSCCSHHHHHHHHHHHHHHHHHHHC--CCGGGEEEEEE
T ss_pred eEEEcC-cCCCEEEEEEEEccCCCHHHHHHHHHHHHHHHHHHhC--cCcceEEEEEE
Confidence 345532 357889999987765 43 456677788888999 99999999754
No 23
>3b64_A Macrophage migration inhibitory factor-like protein; cytokine, MIF, LM1740MIF, lmmif, unknown function; 1.03A {Leishmania major}
Probab=21.57 E-value=98 Score=24.88 Aligned_cols=44 Identities=14% Similarity=0.108 Sum_probs=34.0
Q ss_pred CCEEEEEEeccCc-ccH----HHHHHHHHHHHHHhCCCCCCCcEEEEeecc
Q 013433 30 GNRVVFVNLDACM-ASQ----IVKIKVIERLKARYGDLYTEKNVAISGIHT 75 (443)
Q Consensus 30 ~~rvv~Vs~Dl~~-i~~----~v~~~V~~~L~~~~G~~i~~~nVlIsATHT 75 (443)
....++|.+.+.. ... .+..++-+.|++.+| +++++|.|.-+-.
T Consensus 54 ~~~~~~i~i~~~~g~~~eqk~~l~~~i~~~l~~~lg--i~~~~v~I~~~e~ 102 (112)
T 3b64_A 54 TDPVACVRVEALGGYGPSEPEKVTSIVTAAITKECG--IVADRIFVLYFSP 102 (112)
T ss_dssp CSSCEEEEEECTTCCCTTHHHHHHHHHHHHHHHHHC--CCGGGEEEEEECC
T ss_pred CCCEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhC--cCcceEEEEEEEh
Confidence 4678899998775 444 466777788888899 9999999987644
No 24
>3t5s_A Gilaa.00834.A, macrophage migration inhibitory factor; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.30A {Giardia lamblia}
Probab=21.42 E-value=1.2e+02 Score=25.66 Aligned_cols=43 Identities=16% Similarity=0.123 Sum_probs=34.4
Q ss_pred CCCEEEEEEeccCc-cc----HHHHHHHHHHHHHHhCCCCCCCcEEEEee
Q 013433 29 QGNRVVFVNLDACM-AS----QIVKIKVIERLKARYGDLYTEKNVAISGI 73 (443)
Q Consensus 29 ~~~rvv~Vs~Dl~~-i~----~~v~~~V~~~L~~~~G~~i~~~nVlIsAT 73 (443)
.....++|.+-+++ ++ ..+..++-+.|++.+| +++++|.|.-.
T Consensus 74 s~dp~a~v~i~sig~~t~e~n~~~s~~i~~~l~~~Lg--i~~~riyI~f~ 121 (135)
T 3t5s_A 74 STDLCCFVDFYCIGVISQAKNPSISAAITGCLTQHFK--VKPERVYISFN 121 (135)
T ss_dssp BCCSCEEEEEECCC-----CCHHHHHHHHHHHHHHHC--CCGGGEEEEEE
T ss_pred ccceEEEEEEEEEEEEeccCCchHHHHHHHHHHHhcc--cCccEEEEEec
Confidence 35788999999775 33 3678888899999999 99999999764
No 25
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=20.29 E-value=1e+02 Score=21.84 Aligned_cols=28 Identities=11% Similarity=-0.001 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcEEEEeecc
Q 013433 46 IVKIKVIERLKARYGDLYTEKNVAISGIHT 75 (443)
Q Consensus 46 ~v~~~V~~~L~~~~G~~i~~~nVlIsATHT 75 (443)
.+..++-+.|++.+| ++++.|.|.-.-.
T Consensus 19 ~l~~~lt~~l~~~lg--~~~~~v~V~i~e~ 46 (64)
T 3abf_A 19 ELVRRLTEMASRLLG--EPYEEVRVILYEV 46 (64)
T ss_dssp HHHHHHHHHHHHHTT--CCGGGEEEEEEEE
T ss_pred HHHHHHHHHHHHHhC--CCcccEEEEEEEc
Confidence 356667777778899 9999999976543
No 26
>3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} SCOP: d.157.1.0
Probab=20.25 E-value=1.2e+02 Score=26.54 Aligned_cols=52 Identities=15% Similarity=0.227 Sum_probs=30.6
Q ss_pred eEEEEEEEEcCCCCEEEEEEeccCcccHHHHHHHHHHHHHHhCCCCCCCcEEEEeeccCCC
Q 013433 18 LRARTFIVAEPQGNRVVFVNLDACMASQIVKIKVIERLKARYGDLYTEKNVAISGIHTHAG 78 (443)
Q Consensus 18 L~ARAfVl~d~~~~rvv~Vs~Dl~~i~~~v~~~V~~~L~~~~G~~i~~~nVlIsATHTHSg 78 (443)
+...+++|+.+ .+.+ -+|.+.-. .....+.+.|.+..+ .+.+. |--||.|.=
T Consensus 29 ~~~n~~li~~~--~~~i--LiD~G~~~-~~~~~~~~~l~~~~~--~~i~~--ii~TH~H~D 80 (219)
T 3l6n_A 29 YSANSMYLVTK--KGVV--LFDVPWEK-VQYQSLMDTIKKRHN--LPVVA--VFATHSHDD 80 (219)
T ss_dssp EEEEEEEEEET--TEEE--EESCCSSG-GGHHHHHHHHHHHHS--CCEEE--EECSSSSTT
T ss_pred ccceEEEEEeC--CEEE--EEeCCCCh-HHHHHHHHHHHHhcC--CceeE--EEecCCCcc
Confidence 45678888763 3433 36877532 235567777777655 33344 445787763
No 27
>1rm6_A 4-hydroxybenzoyl-COA reductase alpha subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.41.1.1 d.133.1.1 PDB: 1sb3_A*
Probab=20.13 E-value=1.7e+02 Score=32.13 Aligned_cols=94 Identities=11% Similarity=-0.009 Sum_probs=58.0
Q ss_pred EEEEeccCcccHHHHHHHHHHHHHHhCCCCCCCcEEEEeeccCCCCCCCccchhhhccc-cccchhHHHHHHHHHHHHHH
Q 013433 34 VFVNLDACMASQIVKIKVIERLKARYGDLYTEKNVAISGIHTHAGPGGYLQYVVYIVTS-LGFVRQSFDALVDGIEKSVL 112 (443)
Q Consensus 34 v~Vs~Dl~~i~~~v~~~V~~~L~~~~G~~i~~~nVlIsATHTHSgPgg~~~~~l~~i~~-~Gf~~~y~~~lvdgIveAI~ 112 (443)
+.|..-..-+.|.....+.+.+++.+| ++.++|-|..+-|...|.+...+---.... ......--+.|.+++.+...
T Consensus 472 v~v~~g~~e~GqG~~T~~aQiaAe~Lg--ip~e~V~v~~~DT~~~p~~~~t~aSr~t~~~G~Av~~Aa~~l~~~l~~~aa 549 (769)
T 1rm6_A 472 ITLLTGAADIGQGSNTMASQVAAEVLG--VRLSRIRVISADSALTPKDNGSYSSRVTFMVGNASISAAEELKGVLVKAAA 549 (769)
T ss_dssp EEEEECCCCSSSCHHHHHHHHHHHHHT--CCGGGEEEEESBTTTSCCCCCSCTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCccCCCCHHHHHHHHHHHHhC--CCHHHEEEecCCCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666677778888888999999999999 999999999999998885432210000000 11233444455555544332
Q ss_pred HHHhcCCceEEEEEEEEe
Q 013433 113 QAHENLRPGSIFVNKGEL 130 (443)
Q Consensus 113 ~A~~nl~Pa~L~~g~g~~ 130 (443)
.- -...|-.|.+..|.+
T Consensus 550 ~~-l~~~~~~l~~~~g~v 566 (769)
T 1rm6_A 550 KK-LDAREEDIEVIDEMF 566 (769)
T ss_dssp HH-TTCCGGGEEEETTEE
T ss_pred HH-hCCCHHHeEEeCCEE
Confidence 22 233455566665554
Done!