Query 013434
Match_columns 443
No_of_seqs 360 out of 2191
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 10:30:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013434.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013434hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1o70_A Fasciclin I, FAS I, FCN 100.0 2.7E-44 9.3E-49 357.7 17.7 274 58-429 6-313 (324)
2 1w7d_A Fasciclin-like protein; 100.0 1.9E-30 6.5E-35 226.1 6.9 135 58-200 3-137 (137)
3 2vxp_A Transforming growth fac 100.0 1.4E-28 4.6E-33 213.0 13.4 131 58-197 2-132 (132)
4 1nyo_A Immunogenic protein MPT 99.9 1E-27 3.6E-32 214.7 11.0 134 55-200 25-163 (163)
5 1w7d_A Fasciclin-like protein; 99.9 3.5E-25 1.2E-29 192.7 5.3 129 268-427 3-137 (137)
6 2vxp_A Transforming growth fac 99.9 1.8E-24 6E-29 187.1 5.7 126 269-424 3-132 (132)
7 1nyo_A Immunogenic protein MPT 99.9 2E-23 6.8E-28 186.8 4.7 129 283-427 30-163 (163)
8 1o70_A Fasciclin I, FAS I, FCN 99.8 7.3E-22 2.5E-26 195.9 8.3 140 58-202 159-313 (324)
9 2kd2_A FAS apoptotic inhibitor 14.1 2.9E+02 0.0099 21.3 5.1 16 185-200 75-92 (94)
10 2raq_A Conserved protein MTH88 10.7 81 0.0028 24.5 0.9 15 408-423 69-83 (97)
No 1
>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1
Probab=100.00 E-value=2.7e-44 Score=357.66 Aligned_cols=274 Identities=15% Similarity=0.235 Sum_probs=199.4
Q ss_pred ccHHHHHh------cCCChHHHHHHHHHcC--ChhHhhhccCCCCeEEEecCcHHHhcCCChHHHHhccCCCCHHHHHHH
Q 013434 58 SNSVLVAL------LDSHYTELSELVEKAL--LLQPLEDAVGKHSITIFAPKNEALERDLDPEFKRFLLEPGNLKSLQTL 129 (443)
Q Consensus 58 ~ni~~~~~------~~~~~s~f~~~l~~ag--l~~~L~~~~~~~~~TvFAPtd~Af~~~l~~~~~~~l~~~~~~~~L~~l 129 (443)
.||++++. ++++||+|.++|+++| |.+.|+ +.++||||||+|+||.++ ... .++ .+++.|+++
T Consensus 6 ~~i~~~L~~~~~~~~~~~~s~~~~~l~~ag~~l~~~L~---~~~~~TvFAPtn~Af~~~-~~~--~l~---~~~~~l~~i 76 (324)
T 1o70_A 6 TTVTQFLQSFKENAENGALRKFYEVIMDNGGAVLDDIN---SLTEVTILAPSNEAWNSS-NIN--NVL---RDRNKMRQI 76 (324)
T ss_dssp -------------CCHHHHHHHHHHHHHTCSHHHHHHH---TCSSEEEEEECHHHHHHT-CTH--HHH---TCHHHHHHH
T ss_pred hhHHHHHHHHHhhhcCCcHHHHHHHHHHHhHHHHHHHc---CCCCeEEEEEChHhhhcc-cHh--hhh---CCHHHHHHH
Confidence 56777776 6889999999999999 999999 789999999999999983 221 112 256789999
Q ss_pred HhcceecceeecccccCCC----ccccccCCCe-EEEEEec---CCcEEEcc----eEEEecCcEEcCCceEEEeCcccc
Q 013434 130 LLHHIVSTRIELNRTATES----TQHHTLSSDS-VELTSHD---SGDKFISQ----SKVIHPNAVDRPDGVIHGIERLLI 197 (443)
Q Consensus 130 L~yHiv~~~~~~~~l~~g~----~~~~Tl~g~~-l~v~~~~---~g~v~vn~----a~V~~~d~i~a~NGvIHvID~VL~ 197 (443)
|+|||++|+++.++|..+. ..++|+.|.. +.++... ++.+++++ ++|+.+| +.++||+||+||+||.
T Consensus 77 L~yHvv~g~~~~~~l~~~~~~~~~~~~Tl~g~~~l~~~v~~~~~~~~v~v~~g~~~a~v~~~d-i~~~NGvIhvID~VL~ 155 (324)
T 1o70_A 77 LNMHIIKDRLNVDKIRQKNANLIAQVPTVNNNTFLYFNVRGEGSDTVITVEGGGVNATVIQAD-VAQTNGYVHIIDHVLG 155 (324)
T ss_dssp HHHTEESSCCCHHHHHHHTSSSCCCEEBSSTTCEEEEEEESCGGGCEEEEEETTEEEEEEEEE-EECSSEEEEEESSCTT
T ss_pred HHhcEeCCeecHHHHhhccCCCceEEEcCCCCceEEEEEeecCCceEEEEcCCceeEEEEecc-ccccCcEEEEEchhhh
Confidence 9999999999999987654 1468999987 6777642 23588874 9999999 9999999999999999
Q ss_pred CCCcccccccccccccCcCCCCCCCCCCCccccccCCCCCCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCccccCC
Q 013434 198 PRSVQQDFNNRRNLRSISAVRPEGAPEVDPRTNRLKKPTPASKPGSSPALPVYYAMAPGPSLAPAPAPGPGGPHHHFNGE 277 (443)
Q Consensus 198 P~~~~~~~~~~~sl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~a~a~~P~~~~~~~~~~~~ 277 (443)
|+... +.+.+..+
T Consensus 156 pp~~t-------------------------------------------------------------------i~~~l~~~ 168 (324)
T 1o70_A 156 VPYTT-------------------------------------------------------------------VLGKLESD 168 (324)
T ss_dssp SCCSC-------------------------------------------------------------------HHHHHHHC
T ss_pred hchhh-------------------------------------------------------------------HHHHhhcC
Confidence 87421 11122234
Q ss_pred cchhhHHHHHHHcCCCchHHHHHHHhhhhhhhcccccc-CCceeEEEecChHHHhcCC----cc---CC-CCCc-hHHHH
Q 013434 278 KQVKDFIQTLLHYGGYNEMADILVNLTSLATEMGRLVS-EGYVLTVLAPNDEAMAKLT----TD---QL-SEPG-APEQI 347 (443)
Q Consensus 278 ~~~s~f~~~l~~~~~~~~~~~~l~~~~~~a~~~~~L~~-~~~~~TVFAPtN~AF~~l~----~~---~l-~~~~-~L~~i 347 (443)
++|+.|..+ ++.+++.+.|.+ .+ +||||||+|+||++++ .+ .| .+.. .|+++
T Consensus 169 ~~fs~~~~~-----------------l~~~gl~~~L~~~~~-~~TvFAPtd~Af~~l~~~~~~~~~~~l~~~~~~~l~~i 230 (324)
T 1o70_A 169 PMMSDTYKM-----------------GKFSHFNDQLNNTQR-RFTYFVPRDKGWQKTELDYPSAHKKLFMADFSYHSKSI 230 (324)
T ss_dssp GGGHHHHHH-----------------TTTTTTTGGGGCSSS-EEEEEEECHHHHHHHHHHCHHHHHHHTSGGGHHHHHHH
T ss_pred chHHHHHHH-----------------HHhhCHHHHhCCCCC-CeEEEEeChHHHHhhhhhchhHHHHHhccCcHHHHHHH
Confidence 556766552 233455566764 45 9999999999999984 22 22 3434 89999
Q ss_pred hhhcccCC--ccchHHhhHHhhhcCceeccccCCCceEEEE--ecCCeEEEccCCcceEEeCCceeecCCeEEEEeCccc
Q 013434 348 IYYHVIPE--YQTEESMYNAVRRFGKISYDTLRLPHKVLAQ--EADGSVKFGHGDGSAYLFDPDIYTDGRISVQGIDGVL 423 (443)
Q Consensus 348 L~yHVv~~--~~~~~~l~~~~~~~g~~~~~Tl~~g~~l~~~--~~~~~v~v~~~~~~a~V~~~di~~~nG~vIH~ID~VL 423 (443)
|+|||+++ ..+...+.+.....+...++|++ ..+.+. ..++.+.++.+++.++|+.+||.++|| |||+||+||
T Consensus 231 L~yHvv~~~~~~~~~~l~~~~~~~~~~~~~Tl~--~~l~v~~~~~~~~v~v~~~~~~a~v~~~di~~~NG-vIHvID~VL 307 (324)
T 1o70_A 231 LERHLAISDKEYTMKDLVKFSQESGSVILPTFR--DSLSIRVEEEAGRYVIIWNYKKINVYRPDVECTNG-IIHVIDYPL 307 (324)
T ss_dssp HHTTEEEESSCCCHHHHHHHHHHSSSEEEECSS--SEEEEEEEEETTEEEEEETTEEEEEEEEEEEETTE-EEEEESSCS
T ss_pred HHhcEeCCcceEcHHHHhhhccCCCeeeeeccC--CcEEEEEEecCCEEEEEecCceeEEEEcccccCCC-eEEEeceee
Confidence 99999997 66655554311111233477887 456664 367889888555569999999999999 999999999
Q ss_pred cCCCCC
Q 013434 424 FPPEET 429 (443)
Q Consensus 424 ~P~~~~ 429 (443)
+|++..
T Consensus 308 ~P~~~~ 313 (324)
T 1o70_A 308 LEEKDV 313 (324)
T ss_dssp CCTTTT
T ss_pred cCCccc
Confidence 999754
No 2
>1w7d_A Fasciclin-like protein; cell adhesion; NMR {Rhodobacter sphaeroides} PDB: 1w7e_A
Probab=99.96 E-value=1.9e-30 Score=226.08 Aligned_cols=135 Identities=27% Similarity=0.409 Sum_probs=121.6
Q ss_pred ccHHHHHhcCCChHHHHHHHHHcCChhHhhhccCCCCeEEEecCcHHHhcCCChHHHHhccCCCCHHHHHHHHhcceecc
Q 013434 58 SNSVLVALLDSHYTELSELVEKALLLQPLEDAVGKHSITIFAPKNEALERDLDPEFKRFLLEPGNLKSLQTLLLHHIVST 137 (443)
Q Consensus 58 ~ni~~~~~~~~~~s~f~~~l~~agl~~~L~~~~~~~~~TvFAPtd~Af~~~l~~~~~~~l~~~~~~~~L~~lL~yHiv~~ 137 (443)
.||++++.++++||+|.++++++|+.+.|+ +.++||||||+|+||++ ++....+.+..+++++.|+++|+||++++
T Consensus 3 ~~i~~~l~~~~~~s~f~~~l~~agl~~~L~---~~~~~TvFAPtn~Af~~-l~~~~~~~l~~~~~~~~l~~lL~yHvv~~ 78 (137)
T 1w7d_A 3 GDIVETATGAGSFTTLLTAAEAAGLVDTLK---GDGPFTVFAPTDAAFAA-LPEGTVEDLLKPENKEKLTEILTYHVVPG 78 (137)
T ss_dssp STTGGGGGSCSSSTTTTHHHHHTTTHHHHT---SSSCEEEECCCHHHHTT-STTTHHHHTTSHHHHHHHHHHHHHHEEES
T ss_pred CCHHHHHHhCCCHHHHHHHHHHcCCHHHHc---CCCCEEEEEECHHHHHH-cCHhHHHHHhCcCCHHHHHHHHHhhEeCc
Confidence 578899999999999999999999999999 78999999999999999 66655566666556778999999999999
Q ss_pred eeecccccCCCccccccCCCeEEEEEecCCcEEEcceEEEecCcEEcCCceEEEeCccccCCC
Q 013434 138 RIELNRTATESTQHHTLSSDSVELTSHDSGDKFISQSKVIHPNAVDRPDGVIHGIERLLIPRS 200 (443)
Q Consensus 138 ~~~~~~l~~g~~~~~Tl~g~~l~v~~~~~g~v~vn~a~V~~~d~i~a~NGvIHvID~VL~P~~ 200 (443)
.++.++|..+.. ++|++|+.+.++. .+| ++||+++|+.+| +.++||+||+||+||+|++
T Consensus 79 ~~~~~~l~~~~~-~~tl~G~~l~v~~-~~g-v~vn~a~v~~~d-i~~~NGvIHvID~VL~P~s 137 (137)
T 1w7d_A 79 EVMSSDLTEGMT-AETVEGGALTVTL-EGG-PKVNGVSISQPD-VDASNGVIHVIDGVLMPGA 137 (137)
T ss_dssp CCCTTTSCSSEE-EECTTSCEEEEEC-TTS-CEETTEECSBCC-CBCSSSEEEBCSSCCSSCC
T ss_pred EEcHHHhcCCCe-eeccCCceEEEEe-cCC-EEEeCcEEEECC-eecCCeEEEEECeeeCCCC
Confidence 999999998765 6899999999988 466 999999999999 9999999999999999973
No 3
>2vxp_A Transforming growth factor-beta-induced protein IG-H3; RGD-containing collagen-associated protein, FAS1, BIGH3, vision, amyloid, RGD-CAP, secreted; 2.5A {Homo sapiens} PDB: 1x3b_A
Probab=99.96 E-value=1.4e-28 Score=212.98 Aligned_cols=131 Identities=24% Similarity=0.328 Sum_probs=116.7
Q ss_pred ccHHHHHhcCCChHHHHHHHHHcCChhHhhhccCCCCeEEEecCcHHHhcCCChHHHHhccCCCCHHHHHHHHhcceecc
Q 013434 58 SNSVLVALLDSHYTELSELVEKALLLQPLEDAVGKHSITIFAPKNEALERDLDPEFKRFLLEPGNLKSLQTLLLHHIVST 137 (443)
Q Consensus 58 ~ni~~~~~~~~~~s~f~~~l~~agl~~~L~~~~~~~~~TvFAPtd~Af~~~l~~~~~~~l~~~~~~~~L~~lL~yHiv~~ 137 (443)
.+|++.+.++++||+|.++++++|+.+.|+ +.|+||||||+|+||++ +++...+.|.. +++.|+++|+||++++
T Consensus 2 ~ti~~~l~~~~~fs~~~~~l~~agl~~~L~---~~~~~TvFAPtn~Af~~-l~~~~~~~l~~--~~~~l~~iL~yHvv~~ 75 (132)
T 2vxp_A 2 GTVMDVLKGDNRFSMLVAAIQSAGLTETLN---REGVYTVFAPTNEAFRA-LPPRERSRLLG--DAKELANILKYHIGDE 75 (132)
T ss_dssp CCHHHHHTTSTTCHHHHHHHHHHTCHHHHH---SSCCEEEEEECHHHHHH-SCHHHHHHHHT--CHHHHHHHHHHSBBSS
T ss_pred ccHHHHHHcCCCHHHHHHHHHHcCcHHHHc---CCCCEEEEeECHHHHHh-hCHHHHHHHhc--CHHHHHHHHHhcCcCc
Confidence 589999999999999999999999999999 78999999999999999 67665555542 5678999999999999
Q ss_pred eeecccccCCCccccccCCCeEEEEEecCCcEEEcceEEEecCcEEcCCceEEEeCcccc
Q 013434 138 RIELNRTATESTQHHTLSSDSVELTSHDSGDKFISQSKVIHPNAVDRPDGVIHGIERLLI 197 (443)
Q Consensus 138 ~~~~~~l~~g~~~~~Tl~g~~l~v~~~~~g~v~vn~a~V~~~d~i~a~NGvIHvID~VL~ 197 (443)
.++.+++..+.. ++|++|+.+.++. .++.++||+++|+.+| +.++||+||+||+||+
T Consensus 76 ~~~~~~l~~~~~-~~tl~G~~l~v~~-~~~~v~vn~a~v~~~d-i~a~NGvIHvID~VLl 132 (132)
T 2vxp_A 76 ILVSGGIGALVR-LKSLQGDKLEVSL-KNNVVSVNKEPVAEPD-IMATNGVVHVITNVLQ 132 (132)
T ss_dssp CCCSTTCSSCEE-EEBTTSSEEEEEE-ETTEEEESSCBEEEEE-EEETTEEEEEESSCC-
T ss_pred eeehhhccCCce-EecCCCCEEEEEE-eCCEEEEeccEEEEcc-eecCCEEEEEECcEeC
Confidence 999888877654 6899999999988 4788999999999999 9999999999999985
No 4
>1nyo_A Immunogenic protein MPT70; seven-stranded beta-barrel, fasciclin domain, structural genomics, PSI, protein structure initiative; NMR {Mycobacterium tuberculosis} SCOP: b.118.1.1
Probab=99.95 E-value=1e-27 Score=214.69 Aligned_cols=134 Identities=21% Similarity=0.299 Sum_probs=118.4
Q ss_pred CCCccHHHHHhcCCChHHHHHHHH-----HcCChhHhhhccCCCCeEEEecCcHHHhcCCChHHHHhccCCCCHHHHHHH
Q 013434 55 QINSNSVLVALLDSHYTELSELVE-----KALLLQPLEDAVGKHSITIFAPKNEALERDLDPEFKRFLLEPGNLKSLQTL 129 (443)
Q Consensus 55 ~~~~ni~~~~~~~~~~s~f~~~l~-----~agl~~~L~~~~~~~~~TvFAPtd~Af~~~l~~~~~~~l~~~~~~~~L~~l 129 (443)
....+|++++.++++||+|.++|+ ++|+.+.|+ +.| ||||||+|+||++ ++....+.|.. +++.|+++
T Consensus 25 ~~~~~i~~~l~~~~~~s~f~~~l~~~~~~~agl~~~L~---~~g-~TvFAPtn~AF~~-l~~~~~~~L~~--~~~~L~~i 97 (163)
T 1nyo_A 25 MSQDPVAVAASNNPELTTLTAALSGQLNPQVNLVDTLN---SGQ-YTVFAPTNAAFSK-LPASTIDELKT--NSSLLTSI 97 (163)
T ss_dssp HHHSCHHHHHTTSTTTHHHHHHHHSSSCTTCCCHHHHT---SSS-EEECCBCHHHHHH-SCHHHHHHHTT--CSSHHHHH
T ss_pred CCCcCHHHHHHhCCCHHHHHHHHHhccccccCHHHHhC---CCC-cEEEEECHHHHHh-ccHHHHHHHhc--CHHHHHHH
Confidence 355799999999999999999999 999999999 678 9999999999999 66655555543 34578999
Q ss_pred HhcceecceeecccccCCCccccccCCCeEEEEEecCCcEEEcceEEEecCcEEcCCceEEEeCccccCCC
Q 013434 130 LLHHIVSTRIELNRTATESTQHHTLSSDSVELTSHDSGDKFISQSKVIHPNAVDRPDGVIHGIERLLIPRS 200 (443)
Q Consensus 130 L~yHiv~~~~~~~~l~~g~~~~~Tl~g~~l~v~~~~~g~v~vn~a~V~~~d~i~a~NGvIHvID~VL~P~~ 200 (443)
|+|||+++.++.++|. + .++|++|+.++|+. .++.++||+++|+.+| +.++|||||+||+||+|++
T Consensus 98 L~yHvv~g~~~~~~l~-g--~~~Tl~G~~l~v~~-~~~~v~vn~a~V~~~d-i~a~NGvIHvID~VL~P~~ 163 (163)
T 1nyo_A 98 LTYHVVAGQTSPANVV-G--TRQTLQGASVTVTG-QGNSLKVGNADVVCGG-VSTANATVYMIDSVLMPPA 163 (163)
T ss_dssp HHHTEEESCCCTTTSC-E--EEECTTSSEEEEEE-CSSCEEETTEECSSBC-CCCSSEEEBCBSSCCCCCC
T ss_pred HHhceECCEEcHHHhC-C--ccccCCCCEEEEEE-ECCEEEEeccEEEECc-eEcCCEEEEEECcEeCCCC
Confidence 9999999999999997 4 36899999999998 4778999999999999 9999999999999999973
No 5
>1w7d_A Fasciclin-like protein; cell adhesion; NMR {Rhodobacter sphaeroides} PDB: 1w7e_A
Probab=99.91 E-value=3.5e-25 Score=192.73 Aligned_cols=129 Identities=24% Similarity=0.365 Sum_probs=103.4
Q ss_pred CCCCccccCCcchhhHHHHHHHcCCCchHHHHHHHhhhhhhhccccccCCceeEEEecChHHHhcCCccC---C-C--CC
Q 013434 268 GGPHHHFNGEKQVKDFIQTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQ---L-S--EP 341 (443)
Q Consensus 268 ~~~~~~~~~~~~~s~f~~~l~~~~~~~~~~~~l~~~~~~a~~~~~L~~~~~~~TVFAPtN~AF~~l~~~~---l-~--~~ 341 (443)
.++.+.+..+++|+.|++++.+ +++.+.|.+.+ +||||||+|+||++++.+. + . ++
T Consensus 3 ~~i~~~l~~~~~~s~f~~~l~~-----------------agl~~~L~~~~-~~TvFAPtn~Af~~l~~~~~~~l~~~~~~ 64 (137)
T 1w7d_A 3 GDIVETATGAGSFTTLLTAAEA-----------------AGLVDTLKGDG-PFTVFAPTDAAFAALPEGTVEDLLKPENK 64 (137)
T ss_dssp STTGGGGGSCSSSTTTTHHHHH-----------------TTTHHHHTSSS-CEEEECCCHHHHTTSTTTHHHHTTSHHHH
T ss_pred CCHHHHHHhCCCHHHHHHHHHH-----------------cCCHHHHcCCC-CEEEEEECHHHHHHcCHhHHHHHhCcCCH
Confidence 3566777778888888875543 34555566667 9999999999999997652 3 3 67
Q ss_pred chHHHHhhhcccCCccchHHhhHHhhhcCceeccccCCCceEEEEecCCeEEEccCCcceEEeCCceeecCCeEEEEeCc
Q 013434 342 GAPEQIIYYHVIPEYQTEESMYNAVRRFGKISYDTLRLPHKVLAQEADGSVKFGHGDGSAYLFDPDIYTDGRISVQGIDG 421 (443)
Q Consensus 342 ~~L~~iL~yHVv~~~~~~~~l~~~~~~~g~~~~~Tl~~g~~l~~~~~~~~v~v~~~~~~a~V~~~di~~~nG~vIH~ID~ 421 (443)
+.|+++|+|||++++.+...+.+ |. .++|+. |..+.+...+| +.|++ ++|+.+||.++|| |||+||+
T Consensus 65 ~~l~~lL~yHvv~~~~~~~~l~~-----~~-~~~tl~-G~~l~v~~~~g-v~vn~----a~v~~~di~~~NG-vIHvID~ 131 (137)
T 1w7d_A 65 EKLTEILTYHVVPGEVMSSDLTE-----GM-TAETVE-GGALTVTLEGG-PKVNG----VSISQPDVDASNG-VIHVIDG 131 (137)
T ss_dssp HHHHHHHHHHEEESCCCTTTSCS-----SE-EEECTT-SCEEEEECTTS-CEETT----EECSBCCCBCSSS-EEEBCSS
T ss_pred HHHHHHHHhhEeCcEEcHHHhcC-----CC-eeeccC-CceEEEEecCC-EEEeC----cEEEECCeecCCe-EEEEECe
Confidence 88999999999999865554432 43 578888 88999988888 99986 9999999999999 9999999
Q ss_pred cccCCC
Q 013434 422 VLFPPE 427 (443)
Q Consensus 422 VL~P~~ 427 (443)
||+|+.
T Consensus 132 VL~P~s 137 (137)
T 1w7d_A 132 VLMPGA 137 (137)
T ss_dssp CCSSCC
T ss_pred eeCCCC
Confidence 999974
No 6
>2vxp_A Transforming growth factor-beta-induced protein IG-H3; RGD-containing collagen-associated protein, FAS1, BIGH3, vision, amyloid, RGD-CAP, secreted; 2.5A {Homo sapiens} PDB: 1x3b_A
Probab=99.90 E-value=1.8e-24 Score=187.07 Aligned_cols=126 Identities=21% Similarity=0.286 Sum_probs=97.4
Q ss_pred CCCccccCCcchhhHHHHHHHcCCCchHHHHHHHhhhhhhhccccccCCceeEEEecChHHHhcCCccCC----CCCchH
Q 013434 269 GPHHHFNGEKQVKDFIQTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQL----SEPGAP 344 (443)
Q Consensus 269 ~~~~~~~~~~~~s~f~~~l~~~~~~~~~~~~l~~~~~~a~~~~~L~~~~~~~TVFAPtN~AF~~l~~~~l----~~~~~L 344 (443)
++.+.+.++++|++|++++. .+++.+.|.+.+ +||||||+|+||++++.+.+ .+++.|
T Consensus 3 ti~~~l~~~~~fs~~~~~l~-----------------~agl~~~L~~~~-~~TvFAPtn~Af~~l~~~~~~~l~~~~~~l 64 (132)
T 2vxp_A 3 TVMDVLKGDNRFSMLVAAIQ-----------------SAGLTETLNREG-VYTVFAPTNEAFRALPPRERSRLLGDAKEL 64 (132)
T ss_dssp CHHHHHTTSTTCHHHHHHHH-----------------HHTCHHHHHSSC-CEEEEEECHHHHHHSCHHHHHHHHTCHHHH
T ss_pred cHHHHHHcCCCHHHHHHHHH-----------------HcCcHHHHcCCC-CEEEEeECHHHHHhhCHHHHHHHhcCHHHH
Confidence 34455556667777766443 345556676667 99999999999999987632 577899
Q ss_pred HHHhhhcccCCccchHHhhHHhhhcCceeccccCCCceEEEEecCCeEEEccCCcceEEeCCceeecCCeEEEEeCcccc
Q 013434 345 EQIIYYHVIPEYQTEESMYNAVRRFGKISYDTLRLPHKVLAQEADGSVKFGHGDGSAYLFDPDIYTDGRISVQGIDGVLF 424 (443)
Q Consensus 345 ~~iL~yHVv~~~~~~~~l~~~~~~~g~~~~~Tl~~g~~l~~~~~~~~v~v~~~~~~a~V~~~di~~~nG~vIH~ID~VL~ 424 (443)
+++|+|||+++..+...+. +...++|+. |..+.+...++.+.|++ ++|+.+||.++|| |||+||+||+
T Consensus 65 ~~iL~yHvv~~~~~~~~l~------~~~~~~tl~-G~~l~v~~~~~~v~vn~----a~v~~~di~a~NG-vIHvID~VLl 132 (132)
T 2vxp_A 65 ANILKYHIGDEILVSGGIG------ALVRLKSLQ-GDKLEVSLKNNVVSVNK----EPVAEPDIMATNG-VVHVITNVLQ 132 (132)
T ss_dssp HHHHHHSBBSSCCCSTTCS------SCEEEEBTT-SSEEEEEEETTEEEESS----CBEEEEEEEETTE-EEEEESSCC-
T ss_pred HHHHHhcCcCceeehhhcc------CCceEecCC-CCEEEEEEeCCEEEEec----cEEEEcceecCCE-EEEEECcEeC
Confidence 9999999999875443321 123678888 89999988889999986 8999999999999 9999999985
No 7
>1nyo_A Immunogenic protein MPT70; seven-stranded beta-barrel, fasciclin domain, structural genomics, PSI, protein structure initiative; NMR {Mycobacterium tuberculosis} SCOP: b.118.1.1
Probab=99.87 E-value=2e-23 Score=186.83 Aligned_cols=129 Identities=24% Similarity=0.317 Sum_probs=96.6
Q ss_pred HHHHHHHcCCCchHHHHHHHhh-hhhhhccccccCCceeEEEecChHHHhcCCccC---C-CCCchHHHHhhhcccCCcc
Q 013434 283 FIQTLLHYGGYNEMADILVNLT-SLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQ---L-SEPGAPEQIIYYHVIPEYQ 357 (443)
Q Consensus 283 f~~~l~~~~~~~~~~~~l~~~~-~~a~~~~~L~~~~~~~TVFAPtN~AF~~l~~~~---l-~~~~~L~~iL~yHVv~~~~ 357 (443)
+++.|.+.+.|+.|..++.... ..+++.+.|.+.+ ||||||+|+||++++.+. | .+++.|+++|+|||+++..
T Consensus 30 i~~~l~~~~~~s~f~~~l~~~~~~~agl~~~L~~~g--~TvFAPtn~AF~~l~~~~~~~L~~~~~~L~~iL~yHvv~g~~ 107 (163)
T 1nyo_A 30 VAVAASNNPELTTLTAALSGQLNPQVNLVDTLNSGQ--YTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVVAGQT 107 (163)
T ss_dssp HHHHHTTSTTTHHHHHHHHSSSCTTCCCHHHHTSSS--EEECCBCHHHHHHSCHHHHHHHTTCSSHHHHHHHHTEEESCC
T ss_pred HHHHHHhCCCHHHHHHHHHhccccccCHHHHhCCCC--cEEEEECHHHHHhccHHHHHHHhcCHHHHHHHHHhceECCEE
Confidence 4444444444544444331000 0345666677665 999999999999997652 2 4778999999999999886
Q ss_pred chHHhhHHhhhcCceeccccCCCceEEEEecCCeEEEccCCcceEEeCCceeecCCeEEEEeCccccCCC
Q 013434 358 TEESMYNAVRRFGKISYDTLRLPHKVLAQEADGSVKFGHGDGSAYLFDPDIYTDGRISVQGIDGVLFPPE 427 (443)
Q Consensus 358 ~~~~l~~~~~~~g~~~~~Tl~~g~~l~~~~~~~~v~v~~~~~~a~V~~~di~~~nG~vIH~ID~VL~P~~ 427 (443)
+...+. | .++|+. |..|.+...++.+.|++ ++|+.+||.++|| |||+||+||+|+.
T Consensus 108 ~~~~l~------g--~~~Tl~-G~~l~v~~~~~~v~vn~----a~V~~~di~a~NG-vIHvID~VL~P~~ 163 (163)
T 1nyo_A 108 SPANVV------G--TRQTLQ-GASVTVTGQGNSLKVGN----ADVVCGGVSTANA-TVYMIDSVLMPPA 163 (163)
T ss_dssp CTTTSC------E--EEECTT-SSEEEEEECSSCEEETT----EECSSBCCCCSSE-EEBCBSSCCCCCC
T ss_pred cHHHhC------C--ccccCC-CCEEEEEEECCEEEEec----cEEEECceEcCCE-EEEEECcEeCCCC
Confidence 554431 3 578988 89999988888899986 9999999999999 9999999999974
No 8
>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1
Probab=99.85 E-value=7.3e-22 Score=195.93 Aligned_cols=140 Identities=16% Similarity=0.256 Sum_probs=113.6
Q ss_pred ccHHHHHhcCCChHHHHHHHHHcCChhHhhhccCCCCeEEEecCcHHHhcCC---ChHHHHhccCCCCHHHHHHHHhcce
Q 013434 58 SNSVLVALLDSHYTELSELVEKALLLQPLEDAVGKHSITIFAPKNEALERDL---DPEFKRFLLEPGNLKSLQTLLLHHI 134 (443)
Q Consensus 58 ~ni~~~~~~~~~~s~f~~~l~~agl~~~L~~~~~~~~~TvFAPtd~Af~~~l---~~~~~~~l~~~~~~~~L~~lL~yHi 134 (443)
.++.+.+..+++|++|.++++.+|+.+.|++ ..++||||||+|+||+++. +....+.+. ++..+.|+++|+||+
T Consensus 159 ~ti~~~l~~~~~fs~~~~~l~~~gl~~~L~~--~~~~~TvFAPtd~Af~~l~~~~~~~~~~~l~-~~~~~~l~~iL~yHv 235 (324)
T 1o70_A 159 TTVLGKLESDPMMSDTYKMGKFSHFNDQLNN--TQRRFTYFVPRDKGWQKTELDYPSAHKKLFM-ADFSYHSKSILERHL 235 (324)
T ss_dssp SCHHHHHHHCGGGHHHHHHTTTTTTTGGGGC--SSSEEEEEEECHHHHHHHHHHCHHHHHHHTS-GGGHHHHHHHHHTTE
T ss_pred hhHHHHhhcCchHHHHHHHHHhhCHHHHhCC--CCCCeEEEEeChHHHHhhhhhchhHHHHHhc-cCcHHHHHHHHHhcE
Confidence 5799999999999999999999999999983 2689999999999999942 233333332 333348999999999
Q ss_pred ecc--eeecccccCCC-----ccccccCCCeEEEEEe-cCCcEEEc----ceEEEecCcEEcCCceEEEeCccccCCCcc
Q 013434 135 VST--RIELNRTATES-----TQHHTLSSDSVELTSH-DSGDKFIS----QSKVIHPNAVDRPDGVIHGIERLLIPRSVQ 202 (443)
Q Consensus 135 v~~--~~~~~~l~~g~-----~~~~Tl~g~~l~v~~~-~~g~v~vn----~a~V~~~d~i~a~NGvIHvID~VL~P~~~~ 202 (443)
+++ .++.++|.++. ..++|+. +.+.++.. .+|.++|| +++|+.+| +.++|||||+||+||+|+...
T Consensus 236 v~~~~~~~~~~l~~~~~~~~~~~~~Tl~-~~l~v~~~~~~~~v~v~~~~~~a~v~~~d-i~~~NGvIHvID~VL~P~~~~ 313 (324)
T 1o70_A 236 AISDKEYTMKDLVKFSQESGSVILPTFR-DSLSIRVEEEAGRYVIIWNYKKINVYRPD-VECTNGIIHVIDYPLLEEKDV 313 (324)
T ss_dssp EEESSCCCHHHHHHHHHHSSSEEEECSS-SEEEEEEEEETTEEEEEETTEEEEEEEEE-EEETTEEEEEESSCSCCTTTT
T ss_pred eCCcceEcHHHHhhhccCCCeeeeeccC-CcEEEEEEecCCEEEEEecCceeEEEEcc-cccCCCeEEEeceeecCCccc
Confidence 998 78878887533 1368888 88888764 36788987 89999999 999999999999999998543
No 9
>2kd2_A FAS apoptotic inhibitory molecule 1; protein, beta sandwich, apoptosis; NMR {Mus musculus} PDB: 2kw1_A
Probab=14.14 E-value=2.9e+02 Score=21.30 Aligned_cols=16 Identities=31% Similarity=0.590 Sum_probs=12.3
Q ss_pred CCceEE--EeCccccCCC
Q 013434 185 PDGVIH--GIERLLIPRS 200 (443)
Q Consensus 185 ~NGvIH--vID~VL~P~~ 200 (443)
..|+|| .+|.+.+|..
T Consensus 75 ~~GIiH~L~Vng~~vp~~ 92 (94)
T 2kd2_A 75 KEGIIHTLIVDNREIPEL 92 (94)
T ss_dssp SSEEEEEEEESSCBCCBS
T ss_pred cccEEEEEEECCeECccc
Confidence 458999 7888888763
No 10
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=10.69 E-value=81 Score=24.54 Aligned_cols=15 Identities=33% Similarity=0.550 Sum_probs=11.7
Q ss_pred eeecCCeEEEEeCccc
Q 013434 408 IYTDGRISVQGIDGVL 423 (443)
Q Consensus 408 i~~~nG~vIH~ID~VL 423 (443)
|.--|| +||-||.|.
T Consensus 69 IE~~Gg-~IHSIDEVv 83 (97)
T 2raq_A 69 IESYGG-SIHSVDEVV 83 (97)
T ss_dssp HHHTTC-EEEEEEEEE
T ss_pred HHHcCC-eEEeeeeee
Confidence 446688 999999764
Done!