Query 013442
Match_columns 443
No_of_seqs 160 out of 1664
Neff 8.9
Searched_HMMs 46136
Date Fri Mar 29 03:53:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013442.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013442hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02693 IAA-amino acid hydrol 100.0 9.8E-62 2.1E-66 490.1 49.2 412 27-443 22-437 (437)
2 PLN02280 IAA-amino acid hydrol 100.0 1.4E-61 3.1E-66 491.7 48.1 380 47-426 94-475 (478)
3 COG1473 AbgB Metal-dependent a 100.0 1.7E-55 3.7E-60 431.1 44.2 382 39-426 4-390 (392)
4 PRK06915 acetylornithine deace 100.0 3.5E-56 7.5E-61 451.4 38.1 373 35-428 4-421 (422)
5 PRK08588 succinyl-diaminopimel 100.0 6.9E-56 1.5E-60 443.0 37.8 356 50-425 2-376 (377)
6 PRK13013 succinyl-diaminopimel 100.0 3.1E-54 6.6E-59 438.1 38.6 369 37-426 3-423 (427)
7 TIGR01891 amidohydrolases amid 100.0 3E-53 6.5E-58 421.5 41.3 356 53-410 2-360 (363)
8 PRK06133 glutamate carboxypept 100.0 1.9E-52 4.2E-57 421.7 41.9 368 36-428 25-410 (410)
9 PRK06837 acetylornithine deace 100.0 1.2E-52 2.6E-57 425.6 37.8 370 35-427 7-424 (427)
10 PRK07338 hypothetical protein; 100.0 4E-52 8.7E-57 419.2 40.0 363 36-426 5-399 (402)
11 PRK13009 succinyl-diaminopimel 100.0 2.4E-52 5.2E-57 417.2 37.8 355 51-425 3-374 (375)
12 PRK13004 peptidase; Reviewed 100.0 1.2E-52 2.6E-57 422.2 35.6 368 37-427 4-398 (399)
13 PRK13983 diaminopimelate amino 100.0 2.4E-52 5.2E-57 420.8 35.6 359 50-423 5-399 (400)
14 PRK08596 acetylornithine deace 100.0 4.8E-52 1E-56 420.4 37.2 370 38-429 3-420 (421)
15 TIGR03320 ygeY M20/DapE family 100.0 3.9E-52 8.5E-57 418.1 34.5 364 37-426 2-395 (395)
16 TIGR03526 selenium_YgeY putati 100.0 4.8E-52 1E-56 417.3 34.7 366 37-426 2-395 (395)
17 TIGR01246 dapE_proteo succinyl 100.0 1.6E-51 3.6E-56 410.4 35.3 352 53-424 2-370 (370)
18 PRK05111 acetylornithine deace 100.0 6.6E-51 1.4E-55 408.0 36.5 348 50-426 5-382 (383)
19 TIGR01910 DapE-ArgE acetylorni 100.0 8.1E-52 1.7E-56 413.3 29.5 347 54-416 2-375 (375)
20 TIGR01880 Ac-peptdase-euk N-ac 100.0 1E-50 2.2E-55 408.6 36.5 362 50-426 9-399 (400)
21 PRK06446 hypothetical protein; 100.0 1E-50 2.3E-55 412.3 35.9 361 50-425 2-434 (436)
22 PRK07522 acetylornithine deace 100.0 9.2E-51 2E-55 407.2 35.0 349 50-425 4-384 (385)
23 PRK08651 succinyl-diaminopimel 100.0 1.4E-50 3E-55 407.2 36.0 351 50-426 6-392 (394)
24 TIGR01892 AcOrn-deacetyl acety 100.0 1.6E-50 3.6E-55 402.4 34.8 338 54-420 1-363 (364)
25 PRK08201 hypothetical protein; 100.0 3E-50 6.6E-55 411.5 36.7 372 37-425 3-454 (456)
26 PRK09133 hypothetical protein; 100.0 5.1E-50 1.1E-54 411.4 36.8 358 50-426 37-470 (472)
27 PRK08652 acetylornithine deace 100.0 1.3E-49 2.8E-54 393.4 34.7 338 50-426 2-346 (347)
28 PRK00466 acetyl-lysine deacety 100.0 2.2E-49 4.8E-54 391.2 35.3 330 50-427 10-345 (346)
29 PRK08262 hypothetical protein; 100.0 1.4E-49 3.1E-54 409.6 35.1 370 44-426 40-485 (486)
30 PRK09104 hypothetical protein; 100.0 3.9E-49 8.5E-54 404.0 37.2 373 36-425 5-462 (464)
31 PRK07907 hypothetical protein; 100.0 6.7E-49 1.5E-53 400.6 37.8 370 36-425 6-447 (449)
32 PRK07473 carboxypeptidase; Pro 100.0 2.8E-48 6.1E-53 386.6 39.0 346 50-424 11-375 (376)
33 PRK04443 acetyl-lysine deacety 100.0 2E-48 4.4E-53 384.6 34.6 332 50-424 6-348 (348)
34 TIGR01900 dapE-gram_pos succin 100.0 3.1E-48 6.8E-53 386.1 34.6 331 55-406 1-373 (373)
35 TIGR01886 dipeptidase dipeptid 100.0 2.6E-48 5.7E-53 396.7 34.6 356 39-425 4-465 (466)
36 PRK13007 succinyl-diaminopimel 100.0 4.9E-48 1.1E-52 382.9 35.0 334 49-421 6-351 (352)
37 TIGR01883 PepT-like peptidase 100.0 8.6E-48 1.9E-52 382.4 33.7 340 52-421 2-360 (361)
38 PRK07906 hypothetical protein; 100.0 8.2E-48 1.8E-52 390.6 33.6 353 53-423 2-425 (426)
39 PRK08737 acetylornithine deace 100.0 1.6E-47 3.4E-52 379.2 34.8 333 50-422 6-362 (364)
40 PRK07079 hypothetical protein; 100.0 4.8E-47 1E-51 388.9 37.4 372 37-428 8-458 (469)
41 COG0624 ArgE Acetylornithine d 100.0 8.5E-47 1.8E-51 381.2 37.6 365 50-426 13-408 (409)
42 PRK13381 peptidase T; Provisio 100.0 2.2E-46 4.7E-51 377.4 35.7 347 52-425 3-403 (404)
43 PRK07318 dipeptidase PepV; Rev 100.0 1.5E-46 3.2E-51 384.8 33.3 360 38-426 4-466 (466)
44 PRK12892 allantoate amidohydro 100.0 9.3E-46 2E-50 374.1 37.6 346 50-426 10-411 (412)
45 PRK06156 hypothetical protein; 100.0 9.9E-46 2.1E-50 382.4 36.2 358 45-426 43-516 (520)
46 PRK12893 allantoate amidohydro 100.0 2.1E-45 4.6E-50 371.4 37.1 346 50-426 10-410 (412)
47 PRK07205 hypothetical protein; 100.0 1.4E-45 3E-50 375.8 34.0 353 50-426 11-443 (444)
48 PRK05469 peptidase T; Provisio 100.0 2.9E-45 6.4E-50 369.7 35.8 350 50-426 2-406 (408)
49 PRK09290 allantoate amidohydro 100.0 6.5E-45 1.4E-49 367.6 37.5 346 50-426 7-411 (413)
50 TIGR01902 dapE-lys-deAc N-acet 100.0 1.5E-45 3.2E-50 362.6 31.6 325 55-426 2-335 (336)
51 PRK12891 allantoate amidohydro 100.0 1.3E-43 2.7E-48 358.0 38.3 347 51-428 11-412 (414)
52 TIGR01882 peptidase-T peptidas 100.0 4E-44 8.6E-49 361.1 33.3 348 50-425 3-407 (410)
53 PRK12890 allantoate amidohydro 100.0 2.8E-43 6E-48 356.0 38.2 346 50-426 9-412 (414)
54 TIGR01887 dipeptidaselike dipe 100.0 1.2E-42 2.5E-47 352.5 33.5 344 50-421 2-447 (447)
55 TIGR01879 hydantase amidase, h 100.0 3.1E-42 6.8E-47 346.6 36.0 330 64-424 25-401 (401)
56 TIGR01893 aa-his-dipept aminoa 100.0 1.8E-41 3.8E-46 348.1 36.1 346 50-424 4-476 (477)
57 PRK15026 aminoacyl-histidine d 100.0 5.7E-41 1.2E-45 341.9 36.4 343 50-424 10-482 (485)
58 PRK08554 peptidase; Reviewed 100.0 4.2E-41 9.2E-46 340.6 31.1 355 51-425 2-437 (438)
59 TIGR03176 AllC allantoate amid 100.0 6.2E-40 1.3E-44 329.4 37.7 345 50-426 3-404 (406)
60 KOG2275 Aminoacylase ACY1 and 100.0 2.2E-40 4.7E-45 314.4 29.6 360 50-425 25-418 (420)
61 PRK13799 unknown domain/N-carb 100.0 9.3E-39 2E-43 333.5 39.7 349 48-426 179-590 (591)
62 PRK13590 putative bifunctional 100.0 1.7E-38 3.7E-43 331.8 40.1 346 48-426 179-588 (591)
63 KOG2276 Metalloexopeptidases [ 100.0 7.4E-37 1.6E-41 287.2 29.6 374 37-425 5-471 (473)
64 COG2195 PepD Di- and tripeptid 99.9 8.4E-25 1.8E-29 214.7 20.3 350 50-425 5-412 (414)
65 PF01546 Peptidase_M20: Peptid 99.9 2.6E-22 5.7E-27 180.8 11.5 175 109-422 1-188 (189)
66 COG4187 RocB Arginine degradat 99.7 5.1E-17 1.1E-21 155.2 17.3 261 50-315 8-325 (553)
67 PF07687 M20_dimer: Peptidase 99.7 2.1E-17 4.6E-22 135.6 11.4 103 215-317 2-109 (111)
68 PRK10199 alkaline phosphatase 99.7 2.6E-15 5.7E-20 144.4 19.4 132 50-186 35-189 (346)
69 TIGR03106 trio_M42_hydro hydro 99.7 1.3E-14 2.9E-19 141.5 22.8 128 50-178 3-222 (343)
70 PRK09961 exoaminopeptidase; Pr 99.7 1.9E-14 4.2E-19 140.8 23.1 248 54-424 4-333 (344)
71 TIGR03107 glu_aminopep glutamy 99.6 2.1E-13 4.6E-18 133.1 21.9 243 54-424 2-341 (350)
72 COG1363 FrvX Cellulase M and r 99.6 7.6E-13 1.7E-17 127.7 22.9 253 50-426 2-348 (355)
73 PRK09864 putative peptidase; P 99.5 1.3E-12 2.7E-17 127.4 23.2 247 53-424 3-341 (356)
74 KOG2194 Aminopeptidases of the 98.4 3.5E-06 7.5E-11 88.8 13.1 133 50-197 57-223 (834)
75 PF05343 Peptidase_M42: M42 gl 98.4 1.6E-05 3.4E-10 76.2 15.8 61 132-197 125-188 (292)
76 PF04389 Peptidase_M28: Peptid 98.0 1.7E-05 3.8E-10 70.5 7.4 80 107-197 2-87 (179)
77 KOG3946 Glutaminyl cyclase [Po 97.2 0.0093 2E-07 55.2 13.5 142 33-185 34-200 (338)
78 KOG2526 Predicted aminopeptida 96.4 0.038 8.2E-07 54.2 11.0 112 74-198 165-304 (555)
79 COG2234 Iap Predicted aminopep 95.8 0.025 5.4E-07 57.7 7.4 50 136-187 222-275 (435)
80 KOG2195 Transferrin receptor a 95.3 0.045 9.7E-07 58.3 7.4 77 94-186 339-421 (702)
81 PRK00913 multifunctional amino 94.2 0.65 1.4E-05 47.6 12.2 133 38-174 159-309 (483)
82 PF00883 Peptidase_M17: Cytoso 94.2 0.57 1.2E-05 45.0 11.1 110 53-174 1-140 (311)
83 PF05450 Nicastrin: Nicastrin; 93.7 0.35 7.6E-06 44.8 8.5 66 106-184 1-73 (234)
84 cd00433 Peptidase_M17 Cytosol 93.0 2.1 4.6E-05 44.0 13.4 132 41-174 145-295 (468)
85 PRK05015 aminopeptidase B; Pro 90.5 6.7 0.00015 39.4 13.4 120 50-174 100-246 (424)
86 PRK02256 putative aminopeptida 88.2 0.66 1.4E-05 47.4 4.7 76 338-422 380-460 (462)
87 KOG2597 Predicted aminopeptida 87.9 4.9 0.00011 41.1 10.5 123 50-174 189-330 (513)
88 PTZ00412 leucyl aminopeptidase 86.6 12 0.00027 38.8 12.6 126 44-174 206-354 (569)
89 TIGR01893 aa-his-dipept aminoa 86.4 1.3 2.8E-05 45.9 5.7 45 265-315 336-380 (477)
90 PTZ00371 aspartyl aminopeptida 85.6 1.7 3.6E-05 44.7 6.0 78 338-424 373-455 (465)
91 PRK02813 putative aminopeptida 85.5 1.2 2.7E-05 45.1 5.0 75 338-421 346-425 (428)
92 COG0260 PepB Leucyl aminopepti 78.0 31 0.00068 35.5 11.7 119 49-174 166-308 (485)
93 COG4882 Predicted aminopeptida 51.7 39 0.00084 33.2 6.0 70 95-185 180-259 (486)
94 cd06406 PB1_P67 A PB1 domain i 45.8 38 0.00082 25.6 3.9 56 286-346 8-65 (80)
95 cd06408 PB1_NoxR The PB1 domai 45.4 96 0.0021 23.8 6.1 54 291-349 14-67 (86)
96 COG1333 ResB ResB protein requ 44.7 58 0.0013 33.2 6.2 83 3-102 59-143 (478)
97 PF06675 DUF1177: Protein of u 39.7 60 0.0013 30.1 5.0 82 105-198 31-129 (276)
98 PF13956 Ibs_toxin: Toxin Ibs, 36.8 20 0.00043 18.7 0.8 12 4-15 2-14 (19)
99 COG4187 RocB Arginine degradat 36.1 2E+02 0.0043 29.3 8.3 119 300-428 391-549 (553)
100 PRK06156 hypothetical protein; 33.8 2.5E+02 0.0053 29.4 9.3 25 268-292 240-264 (520)
101 PRK02256 putative aminopeptida 32.7 71 0.0015 32.9 4.9 44 133-180 252-298 (462)
102 PRK15026 aminoacyl-histidine d 32.3 82 0.0018 32.7 5.4 43 267-315 344-386 (485)
103 PRK02813 putative aminopeptida 29.1 71 0.0015 32.6 4.2 43 134-181 227-275 (428)
104 PRK13883 conjugal transfer pro 28.2 2.6E+02 0.0057 24.0 6.8 20 70-89 63-82 (151)
105 TIGR01887 dipeptidaselike dipe 27.7 2.7E+02 0.0058 28.5 8.2 27 269-295 191-217 (447)
106 cd06411 PB1_p51 The PB1 domain 27.7 88 0.0019 23.5 3.4 32 286-317 4-35 (78)
107 COG2195 PepD Di- and tripeptid 27.0 83 0.0018 31.9 4.2 68 106-180 62-139 (414)
108 PF03032 Brevenin: Brevenin/es 27.0 52 0.0011 22.0 1.8 22 3-24 2-23 (46)
109 PF03755 YicC_N: YicC-like fam 26.4 3.5E+02 0.0075 23.2 7.5 64 288-353 30-94 (159)
110 KOG3566 Glycosylphosphatidylin 25.4 8.3E+02 0.018 25.9 12.1 90 74-185 92-193 (617)
111 PF08139 LPAM_1: Prokaryotic m 25.3 75 0.0016 18.3 2.0 13 3-15 6-18 (25)
112 PF04114 Gaa1: Gaa1-like, GPI 23.7 3.3E+02 0.0071 28.5 8.0 72 93-185 3-77 (504)
113 PTZ00264 circumsporozoite-rela 22.4 1.5E+02 0.0033 24.1 4.0 14 4-17 1-14 (148)
114 PF05452 Clavanin: Clavanin; 21.4 83 0.0018 22.6 2.1 11 4-14 1-11 (80)
115 TIGR01004 PulS_OutS lipoprotei 20.8 2.7E+02 0.0059 23.1 5.3 34 54-88 50-83 (128)
116 COG4635 HemG Flavodoxin [Energ 20.6 54 0.0012 28.3 1.2 32 59-90 4-35 (175)
117 PF11912 DUF3430: Protein of u 20.6 58 0.0013 29.3 1.6 16 4-19 1-16 (212)
118 PRK13835 conjugal transfer pro 20.0 4.8E+02 0.01 22.2 6.7 38 50-89 44-87 (145)
No 1
>PLN02693 IAA-amino acid hydrolase
Probab=100.00 E-value=9.8e-62 Score=490.08 Aligned_cols=412 Identities=64% Similarity=1.063 Sum_probs=349.5
Q ss_pred CCccc--ccccchHHHHhhcCchhHHHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeecccCceEEEEECCCC
Q 013442 27 LSPEE--LTQIPVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQ 104 (443)
Q Consensus 27 ~~~~~--~~~~~~~~~~~~~~~~~~~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~~ 104 (443)
.||+. -+|.+.++.+..++.+..+++++++++|+++|++|++|.++++||.++|+++||+++....++|++|++++++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lh~~PE~s~~E~~ta~~i~~~L~~~G~~~~~~~~~~~via~~g~~~ 101 (437)
T PLN02693 22 SPWIAGDVSQIQINLLELAKSPEVFDWMVRIRRKIHENPELGYEEFETSKLIRSELDLIGIKYRYPVAITGIIGYIGTGE 101 (437)
T ss_pred CCccccchhhhHHHHHHHhhhhhhHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHCCCeeEecCCCcEEEEEECCCC
Confidence 35543 3556667776666533337799999999999999999999999999999999999876446789999996555
Q ss_pred CcEEEEEEecccccCcccCCCccccCCCCeeecCcchHHHHHHHHHHHHHHcccccCCceEEEEEeccCCccchHHHHHH
Q 013442 105 PPFVALRADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGGGAKKMLD 184 (443)
Q Consensus 105 ~~~I~~~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEEg~~G~~~~~~ 184 (443)
+|+|+|+||+||||+++..+|++++..+|++||||||++++++++|+++|++.+..++++|.|+|++|||++.|++.+++
T Consensus 102 g~~i~l~~h~DaVp~~e~~~~~~~p~~~G~~hacGhkg~~A~~l~Aa~~L~~~~~~~~g~V~~if~pdEE~~~Ga~~~i~ 181 (437)
T PLN02693 102 PPFVALRADMDALPIQEAVEWEHKSKIPGKMHACGHDGHVAMLLGAAKILQEHRHHLQGTVVLIFQPAEEGLSGAKKMRE 181 (437)
T ss_pred CCEEEEEeecCCCcCCCCCCCCCCCCCCCCEECCcchHHHHHHHHHHHHHHhCcccCCceEEEEEEEcccchhhHHHHHH
Confidence 69999999999999998888999988899999999999999999999999988767889999999999997679999999
Q ss_pred cCCCCccceeeEecCCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHHhhccccCCC
Q 013442 185 AGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPL 264 (443)
Q Consensus 185 ~g~~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~ 264 (443)
+|.+++.|+++++|..+..+.|.+..+.|..++|..+++|+++|+++|++.|+.|+|||..+++++.+|+++..+..++.
T Consensus 182 ~g~~~~~~~iig~h~~p~~~~g~~~~~~g~~~~G~~~~~i~v~Gk~aHaa~P~~G~nAI~~aa~~i~~l~~~~~~~~~~~ 261 (437)
T PLN02693 182 EGALKNVEAIFGIHLSPRTPFGKAASRAGSFMAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPL 261 (437)
T ss_pred CCCCCCCCEEEEEecCCCCCCeeEEeccCcccccceEEEEEEEcccccCCCCCCCcCHHHHHHHHHHHHHHHhcccCCCC
Confidence 99887788999999888778888878888888999999999999999999999999999999999999999876655566
Q ss_pred CCceEEEEEEEcCCcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeec--cCCCCcccCCHHH
Q 013442 265 DSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDD--KSFYPVTVNNKNL 342 (443)
Q Consensus 265 ~~~t~~v~~i~gG~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~d~~~ 342 (443)
...++|++.|+||...|+||++|++++|+|+.|.. +.+.++|+++++..+..+++.+++++.. ..++++..+|+++
T Consensus 262 ~~~ti~vg~i~GG~~~NvVPd~a~~~~diR~~~~~--~~i~~~i~~i~~~~a~~~g~~~e~~~~~~~~~~~~~~~nd~~l 339 (437)
T PLN02693 262 DSKVVTVSKVNGGNAFNVIPDSITIGGTLRAFTGF--TQLQQRIKEIITKQAAVHRCNASVNLTPNGREPMPPTVNNMDL 339 (437)
T ss_pred CCcEEEEEEEEcCCCCceECCeEEEEEEEecCCHH--HHHHHHHHHHHHHHHHHhCCcEEEEEeecCccCCCCccCCHHH
Confidence 67899999999999999999999999999999974 5899999999998777778777776631 2356777888899
Q ss_pred HHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhhcCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHH
Q 013442 343 HEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (443)
Q Consensus 343 ~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~~~~~ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~ 422 (443)
++.+++++++++|.+.+.......|++|+++|.+.+|.+++++|+.++..| ....|+|+|+++.+.+..++++|+.++.
T Consensus 340 ~~~~~~~~~~~~G~~~~~~~~~~~gseDf~~~~~~vP~~~~~lG~~~~~~~-~~~~H~~~f~~de~~l~~~~~~~~~~~~ 418 (437)
T PLN02693 340 YKQFKKVVRDLLGQEAFVEAAPEMGSEDFSYFAETIPGHFSLLGMQDETNG-YASSHSPLYRINEDVLPYGAAIHATMAV 418 (437)
T ss_pred HHHHHHHHHHhcCCcceeecCCCceechHHHHHHHhhhhEEEEecCCCCCC-CCCCCCCCcCCCHHHHHHHHHHHHHHHH
Confidence 999999999988877543334567999999999899999888997642111 2469999999999999999999999999
Q ss_pred HHHhhcCCCcccCCcccccCC
Q 013442 423 RYLLENQPKTTLASRSLHDEL 443 (443)
Q Consensus 423 ~l~~~~~~~~~~~~~~~~~~~ 443 (443)
+++....++... .-.|||+
T Consensus 419 ~~l~~~~~~~~~--~~~~~~~ 437 (437)
T PLN02693 419 QYLKEKASKGSV--SGFHDEL 437 (437)
T ss_pred HHHhhccccCCC--CCCccCC
Confidence 999754332222 3357764
No 2
>PLN02280 IAA-amino acid hydrolase
Probab=100.00 E-value=1.4e-61 Score=491.71 Aligned_cols=380 Identities=59% Similarity=1.022 Sum_probs=336.6
Q ss_pred hhHHHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeecccCceEEEEECCCCCcEEEEEEecccccCcccCCCc
Q 013442 47 EIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWE 126 (443)
Q Consensus 47 ~~~~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~~~~~I~~~~H~DtVp~~~~~~w~ 126 (443)
+..+.+.++.|.++++|+++++|.++++||.++|+++||+++....++|++++++++++|+|+|+||+||||+++..+|+
T Consensus 94 ~~~~~l~~l~r~lh~~PEls~~E~~t~~~i~~~L~~~G~~~~~~~~~~~vva~~g~~~~~~I~l~gh~DaVP~~e~~~w~ 173 (478)
T PLN02280 94 DTVAWLKSVRRKIHENPELAFEEYKTSELVRSELDRMGIMYRYPLAKTGIRAWIGTGGPPFVAVRADMDALPIQEAVEWE 173 (478)
T ss_pred HHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHCCCeEEecCCCCEEEEEECCCCCCEEEEEEecCCCcccCCCCCC
Confidence 34477888899999999999999999999999999999998876668899999954445899999999999999888899
Q ss_pred cccCCCCeeecCcchHHHHHHHHHHHHHHcccccCCceEEEEEeccCCccchHHHHHHcCCCCccceeeEecCCCCCCCc
Q 013442 127 HKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIFGLHVSSLFPVG 206 (443)
Q Consensus 127 ~~~~~~g~l~GrG~kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEEg~~G~~~~~~~g~~~~~d~~i~~~~~~~~~~g 206 (443)
++.+++|+|||||||++++++++|+++|++.+..++++|.|+|++|||.+.|+++++++|.+++.|++++.|+.+.+|.+
T Consensus 174 ~~p~~~G~~h~cGhd~~~A~~l~a~~~L~~~~~~~~g~V~~if~pdEE~g~Ga~~li~~g~~~~~d~~~~~h~~~~~p~g 253 (478)
T PLN02280 174 HKSKVAGKMHACGHDAHVAMLLGAAKILKSREHLLKGTVVLLFQPAEEAGNGAKRMIGDGALDDVEAIFAVHVSHEHPTA 253 (478)
T ss_pred CCCCCCCeEEeCCCcHHHHHHHHHHHHHHhccccCCceEEEEecccccccchHHHHHHCCCCcCCCEEEEEecCCCCCCc
Confidence 99999999999999999999999999999887788999999999999965699999999988888999999987778888
Q ss_pred eEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEcCCcCccccCc
Q 013442 207 TVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDS 286 (443)
Q Consensus 207 ~~~~~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gG~~~n~vP~~ 286 (443)
.+..+++...+|..+++|+++|+++|+++|+.|+||+..+++++.+|+++..+..++....++|++.|+||.+.|+||++
T Consensus 254 ~ig~~~~~~~~G~~~~~I~v~Gk~aHas~P~~G~NAI~~aa~li~~l~~l~~r~~~~~~~~tvnvg~I~GG~~~NvIPd~ 333 (478)
T PLN02280 254 VIGSRPGPLLAGCGFFRAVISGKKGRAGSPHHSVDLILAASAAVISLQGIVSREANPLDSQVVSVTTMDGGNNLDMIPDT 333 (478)
T ss_pred eeEecccccccceeEEEEEEECcchhcCCcccCcCHHHHHHHHHHHHHHHHhcccCCCCCcEEEEEEEEccCCCCEeCCE
Confidence 87777787888999999999999999999999999999999999999988766555556779999999999999999999
Q ss_pred EEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeec--cCCCCcccCCHHHHHHHHHHHHHhcCCcccccCCC
Q 013442 287 VTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDD--KSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRP 364 (443)
Q Consensus 287 a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~ 364 (443)
|++.+|+|++|..+.+++.++|++.++..+..+++++++++.. ...++++.+++++++.+++++.+.+|.+.+.....
T Consensus 334 ~~l~~diR~~~~e~~e~l~~~I~~~~~~~a~~~g~~~~v~~~~~~~~~~pp~~n~~~l~~~~~~~a~~~~G~~~~~~~~~ 413 (478)
T PLN02280 334 VVLGGTFRAFSNTSFYQLLKRIQEVIVEQAGVFRCSATVDFFEKQNTIYPPTVNNDAMYEHVRKVAIDLLGPANFTVVPP 413 (478)
T ss_pred EEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEeccccCCCCCccCCHHHHHHHHHHHHHhcCccccccCCC
Confidence 9999999999999999999999999998877778887776521 23578888899999999999888767654322235
Q ss_pred CCCCchHHHHHhhcCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 013442 365 LMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLL 426 (443)
Q Consensus 365 ~~g~tDa~~~~~~ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~~ 426 (443)
..|++|+++|.+.+|++++++|+.+++||....+|+|+|++++++|..++++|+.++.+++.
T Consensus 414 ~~g~tD~~~~~~~vP~i~~glG~~~~~~G~~~~~Htp~e~id~~~L~~~~~~~~~~~~~~l~ 475 (478)
T PLN02280 414 MMGAEDFSFYSQVVPAAFYYIGIRNETLGSTHTGHSPYFMIDEDVLPIGAAVHAAIAERYLI 475 (478)
T ss_pred CeeechHHHHHhhCCEEEEEEeecCCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHh
Confidence 67899999999889999988898765567767899999999999999999999999999985
No 3
>COG1473 AbgB Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only]
Probab=100.00 E-value=1.7e-55 Score=431.13 Aligned_cols=382 Identities=43% Similarity=0.699 Sum_probs=345.8
Q ss_pred HHHhhcCchhHHHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeecc-cCceEEEEECCC-CCcEEEEEEeccc
Q 013442 39 FLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPV-AVTGVVGYIGTG-QPPFVALRADMDA 116 (443)
Q Consensus 39 ~~~~~~~~~~~~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~~-~~~~via~~~~~-~~~~I~~~~H~Dt 116 (443)
+.+.+ ..+ ++++++.|+|+++|+++.+|+++++||+++|+++||++.... .+++++|.++++ ++|+|+|++.||.
T Consensus 4 ~~~~~-~~~--~~l~~~rr~lH~~PEL~f~E~~Ta~~i~~~L~~~g~~~~~~~~~~TGvva~~~~g~~g~tIalRAD~DA 80 (392)
T COG1473 4 ILDEI-ELK--DELIEWRRDLHEHPELGFEEYRTAAYIAEKLEELGFEVVEVGGGKTGVVATLKGGKPGPTIALRADMDA 80 (392)
T ss_pred HHHHH-hhh--HHHHHHHHHHhhCCccchhHHHHHHHHHHHHHHcCCeeEeccCCceEEEEEEcCCCCCCEEEEEeeccc
Confidence 34444 444 899999999999999999999999999999999999944433 479999999865 5689999999999
Q ss_pred ccCcccCCCccccCCCCeeecCcchHHHHHHHHHHHHHHcccccCCceEEEEEeccCCccchHHHHHHcCCCCc-cceee
Q 013442 117 LAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGGGAKKMLDAGALEN-VEAIF 195 (443)
Q Consensus 117 Vp~~~~~~w~~~~~~~g~l~GrG~kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEEg~~G~~~~~~~g~~~~-~d~~i 195 (443)
+|..++.+++|.++.+|++|+||||++.+++|+++++|++....++++|+|+|+|.||++.|++.|+++|.+++ +|+++
T Consensus 81 LPi~E~t~~~~~S~~~G~mHACGHD~Hta~lLgaA~~L~~~~~~~~Gtv~~ifQPAEE~~~Ga~~mi~~G~~~~~vD~v~ 160 (392)
T COG1473 81 LPIQEETGLPFASKNPGVMHACGHDGHTAILLGAALALAEHKDNLPGTVRLIFQPAEEGGGGAKAMIEDGVFDDFVDAVF 160 (392)
T ss_pred CccccccCCCcccCCCCCcccCCchHHHHHHHHHHHHHHhhhhhCCcEEEEEecccccccccHHHHHhcCCccccccEEE
Confidence 99999999999999999999999999999999999999988668999999999999997669999999999999 99999
Q ss_pred EecCCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEE
Q 013442 196 GLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFE 275 (443)
Q Consensus 196 ~~~~~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~ 275 (443)
++|+.++.|.|.+.+++|..+.+...|+++++|+++|++.|+.++||+..++.++..|+.+..|..++..+..++++.++
T Consensus 161 g~H~~p~~~~g~v~~~~G~~~aa~d~~~i~~~GkggH~a~Ph~~~d~i~aa~~~v~~lq~ivsr~~~p~~~~vv~vg~~~ 240 (392)
T COG1473 161 GLHPGPGLPVGTVALRPGALMAAADEFEITFKGKGGHAAAPHLGIDALVAAAQLVTALQTIVSRNVDPLDSAVVTVGKIE 240 (392)
T ss_pred EecCCCCCCCceEEeecccceeecceEEEEEEeCCcccCCcccccCHHHHHHHHHHHHHHHHhcccCCccCeEEEEEEec
Confidence 99998887899999999988889999999999999999999999999999999999999999898888888999999999
Q ss_pred cCCcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcccCCHHHHHHHHHHHHHhcC
Q 013442 276 GGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLG 355 (443)
Q Consensus 276 gG~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g 355 (443)
||.+.|+||+.+++.+++|.......+.+.++|+++++..+..+++++++.+ ...+|++.+|+.+.+.+++++++..|
T Consensus 241 aG~a~NVIpd~A~l~gtvR~~~~~~~~~~~~~i~~ia~g~a~~~g~~~ei~~--~~~~p~~~Nd~~~~~~~~~~~~~~~~ 318 (392)
T COG1473 241 AGTAANVIPDSAELEGTIRTFSDEVREKLEARIERIAKGIAAAYGAEAEIDY--ERGYPPVVNDPALTDLLAEAAEEVGG 318 (392)
T ss_pred CCCcCCcCCCeeEEEEEeecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEe--cCCCCCccCCHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999999999999999999 88999999999999999999999876
Q ss_pred Cccc--ccCCCCCCCchHHHHHhhcCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 013442 356 VQNI--KENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLL 426 (443)
Q Consensus 356 ~~~~--~~~~~~~g~tDa~~~~~~ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~~ 426 (443)
...+ .......|++|+++|.+.+|..++.+|...... .....|+|...++.+.+..++++++.++..++.
T Consensus 319 ~~~~~~~~~~~~~gsEDf~~~~~~~Pg~~~~lG~~~~~~-~~~~~H~p~~~~de~~l~~g~~~~~~~~~~~~~ 390 (392)
T COG1473 319 EEVVVVELPPSMAGSEDFGYYLEKVPGAFFFLGTGSADG-GTYPLHHPKFDFDEAALATGVKLLAALALLYLA 390 (392)
T ss_pred ccceecccCCCCCccchHHHHHHhCCeeEEEeecCcCCC-CcccccCCcCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 4432 122234599999999999999999999765431 133599999999999999999999999998875
No 4
>PRK06915 acetylornithine deacetylase; Validated
Probab=100.00 E-value=3.5e-56 Score=451.44 Aligned_cols=373 Identities=18% Similarity=0.248 Sum_probs=308.5
Q ss_pred cchHHHHhhcCchhHHHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeec--------------------ccCc
Q 013442 35 IPVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFP--------------------VAVT 94 (443)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~--------------------~~~~ 94 (443)
..++++++++++. +++++++++|++|||+|++|.++++||+++|+++||++++. ..++
T Consensus 4 ~~~~~~~~~~~~~--~~~~~~l~~lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (422)
T PRK06915 4 LKKQICDYIESHE--EEAVKLLKRLIQEKSVSGDESGAQAIVIEKLRELGLDLDIWEPSFKKLKDHPYFVSPRTSFSDSP 81 (422)
T ss_pred HHHHHHHHHHhhH--HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhcCCeeEEeecchhhhhcccccCCcccccCCCc
Confidence 4678889999887 99999999999999999999999999999999999998631 2468
Q ss_pred eEEEEECCC-CCcEEEEEEecccccCcccCCCcc---c-cCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEE
Q 013442 95 GVVGYIGTG-QPPFVALRADMDALAMEESVEWEH---K-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIV 166 (443)
Q Consensus 95 ~via~~~~~-~~~~I~~~~H~DtVp~~~~~~w~~---~-~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~ 166 (443)
|+++++++. ++|+|+|+|||||||+++...|++ . .++||+|||||+ ||+++++|.|+++|++.+..++++|.
T Consensus 82 nlia~~~g~~~~~~l~l~~H~Dtvp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~v~ 161 (422)
T PRK06915 82 NIVATLKGSGGGKSMILNGHIDVVPEGDVNQWDHHPYSGEVIGGRIYGRGTTDMKGGNVALLLAMEALIESGIELKGDVI 161 (422)
T ss_pred eEEEEEcCCCCCCeEEEEeeccccCCCCcccCcCCCCCceEECCEEEecCcccchHHHHHHHHHHHHHHHcCCCCCCcEE
Confidence 999999653 468999999999999998889954 4 457999999998 79999999999999998878899999
Q ss_pred EEEeccCC-ccchHHHHHHcCCCCccceeeEecCCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHH
Q 013442 167 LVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVA 245 (443)
Q Consensus 167 ~i~~~dEE-g~~G~~~~~~~g~~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~ 245 (443)
|++++||| ++.|+..++.++. ..|++++. +|++. ....+++|..+++|+++|+++|+|.|+.|.||+..
T Consensus 162 ~~~~~dEE~g~~G~~~~~~~~~--~~d~~i~~-----ep~~~---~i~~~~~G~~~~~i~v~G~~~H~s~p~~g~nAi~~ 231 (422)
T PRK06915 162 FQSVIEEESGGAGTLAAILRGY--KADGAIIP-----EPTNM---KFFPKQQGSMWFRLHVKGKAAHGGTRYEGVSAIEK 231 (422)
T ss_pred EEEecccccCCcchHHHHhcCc--CCCEEEEC-----CCCCc---cceeecccEEEEEEEEEeeccccCCCCcCcCHHHH
Confidence 99999999 7789888888764 56888763 34442 12346789999999999999999999999999999
Q ss_pred HHHHHHHHHHhhccc----cCCC-----CCceEEEEEEEcCCcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHH
Q 013442 246 ASNVIVSLQHLVSRE----ADPL-----DSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQA 316 (443)
Q Consensus 246 ~~~~i~~l~~~~~~~----~~~~-----~~~t~~v~~i~gG~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~ 316 (443)
+++++..|+++.... ..+. .+.++|++.|+||...|+||+.|++.+|+|+.|.++.+++.++|++.+++.+
T Consensus 232 ~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~t~~v~~i~gG~~~nvvP~~a~~~~d~R~~p~~~~~~v~~~i~~~l~~~~ 311 (422)
T PRK06915 232 SMFVIDHLRKLEEKRNDRITDPLYKGIPIPIPINIGKIEGGSWPSSVPDSVILEGRCGIAPNETIEAAKEEFENWIAELN 311 (422)
T ss_pred HHHHHHHHHHHHHHhccccCCCcccCCCCCceEeEEEeeCCCCCCccCcEEEEEEEEEECCCCCHHHHHHHHHHHHHHHh
Confidence 999999998875321 1111 2458999999999999999999999999999999999999999999998765
Q ss_pred Hhh----CCeEEEEeeccC-CCCcccCCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhh--cCcEEEEecCCC
Q 013442 317 SVQ----RCNATVTFDDKS-FYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA--IPGYFYYLGMND 389 (443)
Q Consensus 317 ~~~----~~~~~v~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~~~~~--ip~~~~~~G~~~ 389 (443)
... +..+++++.... ...+...|+++++.+++++++++|.++. ...++|++|+++|.+. +|+++ ||
T Consensus 312 ~~~~~~~~~~~~v~~~~~~~~~~~~~~d~~lv~~l~~a~~~~~G~~~~--~~~~~g~tD~~~~~~~~giP~v~--fG--- 384 (422)
T PRK06915 312 DVDEWFVEHPVEVEWFGARWVPGELEENHPLMTTLEHNFVEIEGNKPI--IEASPWGTDGGLLTQIAGVPTIV--FG--- 384 (422)
T ss_pred ccChhhhcCCceEEeecccCCcccCCCCCHHHHHHHHHHHHHhCCCCe--eceeeeeccHHHHhccCCCCEEE--EC---
Confidence 431 233455442111 1123466789999999999998788764 2457789999999985 99865 55
Q ss_pred CCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhhc
Q 013442 390 ETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLLEN 428 (443)
Q Consensus 390 ~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~~~~ 428 (443)
||....+|+|||+++++++.+++++|++++.++|..+
T Consensus 385 --pg~~~~aH~~dE~v~~~~l~~~~~~~~~ll~~~~~~~ 421 (422)
T PRK06915 385 --PGETKVAHYPNEYIEVDKMIAAAKIIALTLLDWCEVK 421 (422)
T ss_pred --CCCccccCCCCceeEHHHHHHHHHHHHHHHHHHhCCC
Confidence 4545679999999999999999999999999999754
No 5
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=6.9e-56 Score=442.99 Aligned_cols=356 Identities=20% Similarity=0.238 Sum_probs=300.2
Q ss_pred HHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeec---ccCceEEEEECCCCCcEEEEEEecccccCcccCCCc
Q 013442 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFP---VAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWE 126 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~---~~~~~via~~~~~~~~~I~~~~H~DtVp~~~~~~w~ 126 (443)
+++++++++|++|||+|++|.++++||.++|+++||+++.. ++++|+++++++++ |+|+|+||+||||+++..+|+
T Consensus 2 ~~~~~~l~~Lv~i~s~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~l~a~~g~~~-~~il~~~H~DtVp~~~~~~w~ 80 (377)
T PRK08588 2 EEKIQILADIVKINSVNDNEIEVANYLQDLFAKHGIESKIVKVNDGRANLVAEIGSGS-PVLALSGHMDVVAAGDVDKWT 80 (377)
T ss_pred hHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHCCCceEEEecCCCCceEEEEeCCCC-ceEEEEeeecccCCCCcccCc
Confidence 57899999999999999999999999999999999998753 45689999995443 899999999999998888895
Q ss_pred c---c-cCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchHHHHHHcCCCCccceeeEec
Q 013442 127 H---K-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLH 198 (443)
Q Consensus 127 ~---~-~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~~~~~g~~~~~d~~i~~~ 198 (443)
+ . .++||+|||||+ |+++++++.|+++|++.+..++++|.|+|++||| ++.|++++++++.+.++|++++.+
T Consensus 81 ~~Pf~~~~~~g~l~GrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~i~l~~~~dEE~g~~G~~~~~~~~~~~~~d~~i~~e 160 (377)
T PRK08588 81 YDPFELTEKDGKLYGRGATDMKSGLAALVIAMIELKEQGQLLNGTIRLLATAGEEVGELGAKQLTEKGYADDLDALIIGE 160 (377)
T ss_pred CCCCCeEEECCEEEecCcccccchHHHHHHHHHHHHHcCCCCCCcEEEEEEcccccCchhHHHHHhcCccCCCCEEEEec
Confidence 4 3 568899999998 8999999999999999887889999999999999 668999999998877788887654
Q ss_pred CCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHHhhccc---cCCCCCceEEEEEEE
Q 013442 199 VSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSRE---ADPLDSQVLTVAKFE 275 (443)
Q Consensus 199 ~~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~~~~~~---~~~~~~~t~~v~~i~ 275 (443)
+. . ..+. .+++|..+++|+++|+++|+|.|+.|.|||..+++++.+++++..+. .+..+..++|++.|+
T Consensus 161 p~--~--~~i~----~~~~G~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~t~~v~~i~ 232 (377)
T PRK08588 161 PS--G--HGIV----YAHKGSMDYKVTSTGKAAHSSMPELGVNAIDPLLEFYNEQKEYFDSIKKHNPYLGGLTHVVTIIN 232 (377)
T ss_pred CC--C--ceeE----EEEEEEEEEEEEEEeechhccCCccccCHHHHHHHHHHHHHHHhhhhcccCccCCCCceeeeEEe
Confidence 31 1 1221 24579999999999999999999999999999999999998775332 223456899999999
Q ss_pred cCCcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCccc--CCHHHHHHHHHHHHHh
Q 013442 276 GGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTV--NNKNLHEHFQKVAADM 353 (443)
Q Consensus 276 gG~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~--~d~~~~~~~~~~~~~~ 353 (443)
||...|+||++|++++|+|+.|.++.+++.++|+++++..+...++++++++ ...++|+. .++++++.+++++++.
T Consensus 233 gG~~~nvip~~~~~~~d~R~~p~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~--~~~~~p~~~~~~~~l~~~~~~~~~~~ 310 (377)
T PRK08588 233 GGEQVNSVPDEAELEFNIRTIPEYDNDQVISLLQEIINEVNQNGAAQLSLDI--YSNHRPVASDKDSKLVQLAKDVAKSY 310 (377)
T ss_pred CCCcCCcCCCeEEEEEEeccCCCCCHHHHHHHHHHHHHHHhhccCCceEEEE--ecCCCCcCCCCCCHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999987655566777776 34455543 4578999999999998
Q ss_pred cCCcccccCCCCCCCchHHHHHhh---cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 013442 354 LGVQNIKENRPLMGTEDFSFFAEA---IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYL 425 (443)
Q Consensus 354 ~g~~~~~~~~~~~g~tDa~~~~~~---ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~ 425 (443)
+|.++. ....+|++|+++|... +|++ .+| ||+...+|++||+++++++.+++++|+.++.+++
T Consensus 311 ~g~~~~--~~~~~g~tD~~~~~~~~~~ip~i--~~G-----pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~~~ 376 (377)
T PRK08588 311 VGQDIP--LSAIPGATDASSFLKKKPDFPVI--IFG-----PGNNLTAHQVDEYVEKDMYLKFIDIYKEIIIQYL 376 (377)
T ss_pred hCCCCc--eecCCCcccHHHHhhhcCCCCEE--EEC-----CCCCccCCCCCceeEHHHHHHHHHHHHHHHHHHh
Confidence 787652 3467889999999753 5654 466 5544679999999999999999999999999886
No 6
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=3.1e-54 Score=438.07 Aligned_cols=369 Identities=15% Similarity=0.159 Sum_probs=298.3
Q ss_pred hHHHHhhcCchhHHHHHHHHHHHHhCCCCC--c-ccHHHHHHHHHHHHhCCCCeeecc-----------cCceEEEEECC
Q 013442 37 VKFLDFAKKPEIFYWMVNIRRKIHENPELG--F-QEFETSKLIRAELDQMGIPYKFPV-----------AVTGVVGYIGT 102 (443)
Q Consensus 37 ~~~~~~~~~~~~~~~~i~ll~~l~~ipS~s--~-~E~~~~~~l~~~l~~~G~~~~~~~-----------~~~~via~~~~ 102 (443)
+++.+++++++ +++++++++|++|||++ + +|.++++||.++|+++||+++... .++|+++++++
T Consensus 3 ~~~~~~~~~~~--~~~~~~l~~Lv~i~S~~~~g~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~nlia~~~g 80 (427)
T PRK13013 3 DRLFAAIEARR--DDLVALTQDLIRIPTLNPPGRAYREICEFLAARLAPRGFEVELIRAEGAPGDSETYPRWNLVARRQG 80 (427)
T ss_pred HHHHHHHHHhH--HHHHHHHHHHhcCCCcCCCCccHHHHHHHHHHHHHHCCCceEEEecCCCCcccccCCcceEEEEecC
Confidence 46777888877 99999999999999997 3 458999999999999999987531 15699999965
Q ss_pred C-CCcEEEEEEecccccCcccCCCc---cc-cCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC
Q 013442 103 G-QPPFVALRADMDALAMEESVEWE---HK-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (443)
Q Consensus 103 ~-~~~~I~~~~H~DtVp~~~~~~w~---~~-~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE 174 (443)
+ ++|+|+|+||+||||+++ .|+ |. .++||+|||||+ ||+++++|+|+++|++.+..++++|.|+|++|||
T Consensus 81 ~~~~~~i~l~gH~DvVp~~~--~W~~~Pf~~~~~dg~iyGrGa~D~Kg~~aa~l~a~~~l~~~~~~~~~~v~~~~~~dEE 158 (427)
T PRK13013 81 ARDGDCVHFNSHHDVVEVGH--GWTRDPFGGEVKDGRIYGRGACDMKGGLAASIIAAEAFLAVYPDFAGSIEISGTADEE 158 (427)
T ss_pred CCCCCEEEEEeccccCCCCC--CCcCCCCCceEECCEEEeccccccchHHHHHHHHHHHHHHhCCCCCccEEEEEEeccc
Confidence 4 458999999999999974 685 44 567899999997 8999999999999999887889999999999999
Q ss_pred -cc-chHHHHHHcCCCC--ccceeeEecCCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHH
Q 013442 175 -GG-GGAKKMLDAGALE--NVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVI 250 (443)
Q Consensus 175 -g~-~G~~~~~~~g~~~--~~d~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i 250 (443)
|+ .|.+++++++.+. ++|++++.+ |++... ...+++|..+++|+++|+++|++.|+.|.||+..+++++
T Consensus 159 ~g~~~g~~~l~~~~~~~~~~~d~~i~~e-----p~~~~~--i~~~~~G~~~~~i~v~G~~~H~~~p~~g~nai~~~~~~l 231 (427)
T PRK13013 159 SGGFGGVAYLAEQGRFSPDRVQHVIIPE-----PLNKDR--ICLGHRGVWWAEVETRGRIAHGSMPFLGDSAIRHMGAVL 231 (427)
T ss_pred cCChhHHHHHHhcCCccccCCCEEEEec-----CCCCCc--eEEeeeeEEEEEEEEEccccccCCCCcCcCHHHHHHHHH
Confidence 55 4788888887766 568887654 333211 123467999999999999999999999999999999999
Q ss_pred HHHHHhhccc-----c------CCCCCceEEEEEEEcCCcC----------ccccCcEEEEEEEecCChHHHHHHHHHHH
Q 013442 251 VSLQHLVSRE-----A------DPLDSQVLTVAKFEGGGAF----------NIIPDSVTIGGTFRAFSKESIIQLKQRIE 309 (443)
Q Consensus 251 ~~l~~~~~~~-----~------~~~~~~t~~v~~i~gG~~~----------n~vP~~a~~~~diR~~~~~~~~~v~~~i~ 309 (443)
.+|+++..+. . +.....++|++.|+||... |+||++|++.+|+|++|.++.+++.++|+
T Consensus 232 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~t~~v~~i~gG~~~~~~~~~~~~~n~IPd~a~~~idiR~~p~~~~~~v~~~i~ 311 (427)
T PRK13013 232 AEIEERLFPLLATRRTAMPVVPEGARQSTLNINSIHGGEPEQDPDYTGLPAPCVADRCRIVIDRRFLIEEDLDEVKAEIT 311 (427)
T ss_pred HHHHHHhhhhhhcccccCCCCCcccCCCceeeeEEeCCCccccccccccccccCCceEEEEEEEEeCCCCCHHHHHHHHH
Confidence 9997653110 0 0113578999999999766 99999999999999999999999999999
Q ss_pred HHHHHHHHhh-CCeEEEEeeccCCCCccc--CCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhh--cCcEEEE
Q 013442 310 EVVMKQASVQ-RCNATVTFDDKSFYPVTV--NNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA--IPGYFYY 384 (443)
Q Consensus 310 ~~~~~~~~~~-~~~~~v~~~~~~~~~~~~--~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~~~~~--ip~~~~~ 384 (443)
+.+++.+... ++.++++. ...++|+. .++++++.+.+++++.+|.++. ...++|++|++++.+. +|.++ .
T Consensus 312 ~~i~~~~~~~~~~~~~~~~--~~~~~p~~~~~~~~lv~~l~~a~~~~~g~~~~--~~~~~g~~D~~~~~~~g~~~~~v-~ 386 (427)
T PRK13013 312 ALLERLKRARPGFAYEIRD--LFEVLPTMTDRDAPVVRSVAAAIERVLGRQAD--YVVSPGTYDQKHIDRIGKLKNCI-A 386 (427)
T ss_pred HHHHHHHhhCCCceeEEEE--cccCCcccCCCCCHHHHHHHHHHHHhhCCCCc--eeecCccCCHHHHHhcCCCCCEE-E
Confidence 9998765432 45555544 33445543 4468999999999987787653 3356888999999886 34333 5
Q ss_pred ecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 013442 385 LGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLL 426 (443)
Q Consensus 385 ~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~~ 426 (443)
|| ||....+|++|||++++++.+++++|+.++.++|+
T Consensus 387 fG-----Pg~~~~aH~~nE~v~i~~l~~~~~~l~~~l~~~~~ 423 (427)
T PRK13013 387 YG-----PGILDLAHQPDEWVGIADMVDSAKVMALVLADLLA 423 (427)
T ss_pred EC-----CCCccccCCCCceeEHHHHHHHHHHHHHHHHHHhc
Confidence 67 55556799999999999999999999999999985
No 7
>TIGR01891 amidohydrolases amidohydrolase. This model represents a subfamily of amidohydrolases which are a subset of those sequences detected by pfam01546. Included within this group are hydrolases of hippurate (N-benzylglycine), indoleacetic acid (IAA) N-conjugates of amino acids, N-acetyl-L-amino acids and aminobenzoylglutamate. These hydrolases are of the carboxypeptidase-type, most likely utilizing a zinc ion in the active site.
Probab=100.00 E-value=3e-53 Score=421.51 Aligned_cols=356 Identities=44% Similarity=0.753 Sum_probs=301.3
Q ss_pred HHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeee-cccCceEEEEECCC-CCcEEEEEEecccccCcccCCCccccC
Q 013442 53 VNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKF-PVAVTGVVGYIGTG-QPPFVALRADMDALAMEESVEWEHKSK 130 (443)
Q Consensus 53 i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~-~~~~~~via~~~~~-~~~~I~~~~H~DtVp~~~~~~w~~~~~ 130 (443)
++++++|++|||+|++|.++++||.++|+++|++++. .....|++++++++ ++|+|+|+||+||||+++...+||...
T Consensus 2 ~~~~~~L~~ips~s~~E~~~a~~l~~~l~~~g~~~~~~~~~~~~vva~~~~~~~~~~i~l~gH~DtVp~~~~~~~pf~~~ 81 (363)
T TIGR01891 2 TDIRRHLHEHPELSFEEFKTSSLIAEALESLGIEVRRGVGGATGVVATIGGGKPGPVVALRADMDALPIQEQTDLPYKST 81 (363)
T ss_pred hHHHHHHhcCCCCCCchHHHHHHHHHHHHHcCCceEecCCCCcEEEEEEeCCCCCCEEEEEeccCCCCcccccCCCcccC
Confidence 5789999999999999999999999999999999886 34568899999764 468999999999999877555677755
Q ss_pred CCCeeecCcchHHHHHHHHHHHHHHcccccCCceEEEEEeccCCccchHHHHHHcCCCCccceeeEecCCCCCCCceEEe
Q 013442 131 VPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVAS 210 (443)
Q Consensus 131 ~~g~l~GrG~kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEEg~~G~~~~~~~g~~~~~d~~i~~~~~~~~~~g~~~~ 210 (443)
+||++||||+|++++++++|+++|++.+..++++|.|+|++|||.+.|++++++++.+++.|+++++++.+..+.+.+.+
T Consensus 82 ~~g~l~g~G~~~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~G~~~~~~~~~~~~~d~~i~~e~~~~~~~~~~~~ 161 (363)
T TIGR01891 82 NPGVMHACGHDLHTAILLGTAKLLKKLADLLEGTVRLIFQPAEEGGGGATKMIEDGVLDDVDAILGLHPDPSIPAGTVGL 161 (363)
T ss_pred CCCceecCcCHHHHHHHHHHHHHHHhchhhCCceEEEEEeecCcCcchHHHHHHCCCCCCcCEEEEECCCCCCCCeEEEE
Confidence 78999999999999999999999998776788999999999999668999999988777889999998877667777666
Q ss_pred ecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEcCCcCccccCcEEEE
Q 013442 211 RPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIG 290 (443)
Q Consensus 211 ~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gG~~~n~vP~~a~~~ 290 (443)
..+..++|..+++|+++|+++|++.|+.|.||+..+++++.+++++.....+.....++|++.|+||.+.|+||++|++.
T Consensus 162 ~~~~~~~g~~~~~i~~~G~~~Has~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~gG~~~nvvP~~~~~~ 241 (363)
T TIGR01891 162 RPGTIMAAADKFEVTIHGKGAHAARPHLGRDALDAAAQLVVALQQIVSRNVDPSRPAVVTVGIIEAGGAPNVIPDKASMS 241 (363)
T ss_pred CCCcceeecceEEEEEEeecccccCcccccCHHHHHHHHHHHHHHHhhccCCCCCCcEEEEEEEEcCCCCcEECCeeEEE
Confidence 66777889999999999999999999999999999999999998864332233345689999999999999999999999
Q ss_pred EEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcccCCHHHHHHHHHHHHHhcCCccc-ccCCCCCCCc
Q 013442 291 GTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNI-KENRPLMGTE 369 (443)
Q Consensus 291 ~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~-~~~~~~~g~t 369 (443)
+|+|++|..+.+++.++|++.++..+...++++++++ ...+|+...++++++.+++++++++|..++ ..+..++|++
T Consensus 242 ~diR~~~~~~~e~~~~~i~~~~~~~~~~~~~~ve~~~--~~~~p~~~~~~~l~~~l~~a~~~~~g~~~~~~~~~~~~gg~ 319 (363)
T TIGR01891 242 GTVRSLDPEVRDQIIDRIERIVEGAAAMYGAKVELNY--DRGLPAVTNDPALTQILKEVARHVVGPENVAEDPEVTMGSE 319 (363)
T ss_pred EEEEeCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEE--ecCCCCccCCHHHHHHHHHHHHHhcCccceeccCCCCcccc
Confidence 9999999999999999999999988777788888876 335555567889999999999997785432 1234678999
Q ss_pred hHHHHHhhcCcEEEEecCCCCCCCCCCCCCCCCCCCCCCch
Q 013442 370 DFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDAL 410 (443)
Q Consensus 370 Da~~~~~~ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l 410 (443)
|++++++.+|++++++|....+.++....|++++..+.+.+
T Consensus 320 Da~~~~~~~P~~~~f~~~~~~~~~~~~~~h~~~~~~~~~~~ 360 (363)
T TIGR01891 320 DFAYYSQKVPGAFFFLGIGNEGTGLSHPLHHPRFDIDEEAL 360 (363)
T ss_pred CHHHHHHhCCeeEEEEecCCCCCCCCCCCCCCCCcCChHHh
Confidence 99999988999998888764322234579999988876654
No 8
>PRK06133 glutamate carboxypeptidase; Reviewed
Probab=100.00 E-value=1.9e-52 Score=421.70 Aligned_cols=368 Identities=18% Similarity=0.202 Sum_probs=301.8
Q ss_pred chHHHHhhcCchhHHHHHHHHHHHHhCCCCCccc---HHHHHHHHHHHHhCCCCeeecc----cCceEEEEECCCCCcEE
Q 013442 36 PVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQE---FETSKLIRAELDQMGIPYKFPV----AVTGVVGYIGTGQPPFV 108 (443)
Q Consensus 36 ~~~~~~~~~~~~~~~~~i~ll~~l~~ipS~s~~E---~~~~~~l~~~l~~~G~~~~~~~----~~~~via~~~~~~~~~I 108 (443)
++++.++++++. +++++++++|++|||+|++| .++++||.++|+++||++++.. .++|++++++++++|+|
T Consensus 25 ~~~~~~~~~~~~--~~~~~~l~~lv~i~S~s~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~lia~~~g~~~~~i 102 (410)
T PRK06133 25 DAELLAAAQQEQ--PAYLDTLKELVSIESGSGDAEGLKQVAALLAERLKALGAKVERAPTPPSAGDMVVATFKGTGKRRI 102 (410)
T ss_pred HHHHHHHHHHhH--HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHhCCCeEEEEccCCCCCCeEEEEECCCCCceE
Confidence 567888899888 99999999999999999876 4899999999999999987632 35799999976545899
Q ss_pred EEEEecccccCcccCCCccc--cCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchHHHH
Q 013442 109 ALRADMDALAMEESVEWEHK--SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKM 182 (443)
Q Consensus 109 ~~~~H~DtVp~~~~~~w~~~--~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~~ 182 (443)
+|+||+||||++. .|+.+ .+++|++||||+ |++++++|+|+++|++.+..++++|.|+|++||| ++.|++++
T Consensus 103 ll~~H~D~Vp~~~--~w~~~Pf~~~~~~iyGrG~~D~kgg~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~G~~~~ 180 (410)
T PRK06133 103 MLIAHMDTVYLPG--MLAKQPFRIDGDRAYGPGIADDKGGVAVILHALKILQQLGFKDYGTLTVLFNPDEETGSPGSREL 180 (410)
T ss_pred EEEeecCccCCCC--ccCCCCEEEECCEEECCccccchHHHHHHHHHHHHHHHcCCCCCCCEEEEEECCcccCCccHHHH
Confidence 9999999999864 48533 467899999997 8999999999999998887788999999999999 66899999
Q ss_pred HHcCCCCccceeeEecCCCCCCCceEEeecCcccccceEEEEEEEecCCCCC-CCCCCCcHHHHHHHHHHHHHHhhcccc
Q 013442 183 LDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAA-IPQHTIDPIVAASNVIVSLQHLVSREA 261 (443)
Q Consensus 183 ~~~g~~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss-~p~~g~NAi~~~~~~i~~l~~~~~~~~ 261 (443)
+++.. .+.|++++.++. .+.+.+.+ +++|..+++|+++|+++||| .|+.|.||+..+++++..|+++.
T Consensus 181 ~~~~~-~~~d~~i~~ep~--~~~~~v~~----~~~G~~~~~v~v~G~~~Hsg~~p~~g~nAi~~~~~~i~~l~~~~---- 249 (410)
T PRK06133 181 IAELA-AQHDVVFSCEPG--RAKDALTL----ATSGIATALLEVKGKASHAGAAPELGRNALYELAHQLLQLRDLG---- 249 (410)
T ss_pred HHHHh-ccCCEEEEeCCC--CCCCCEEE----eccceEEEEEEEEeeccccCCCcccCcCHHHHHHHHHHHHHhcc----
Confidence 87643 357888887642 23233332 35799999999999999986 89999999999999999998763
Q ss_pred CCCCCceEEEEEEEcCCcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcccCC--
Q 013442 262 DPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNN-- 339 (443)
Q Consensus 262 ~~~~~~t~~v~~i~gG~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d-- 339 (443)
......+++++.|+||.+.|+||++|++.+|+|+.|.++.+++.++|++++++ +...+++++++. ...++++..+
T Consensus 250 ~~~~~~t~~~~~i~gG~~~nvIP~~~~~~~diR~~~~~~~~~v~~~i~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~ 326 (410)
T PRK06133 250 DPAKGTTLNWTVAKAGTNRNVIPASASAQADVRYLDPAEFDRLEADLQEKVKN-KLVPDTEVTLRF--ERGRPPLEANAA 326 (410)
T ss_pred CCCCCeEEEeeEEECCCCCceeCCccEEEEEEEECCHHHHHHHHHHHHHHHhc-cCCCCeEEEEEe--ccccCCcccCcc
Confidence 22234689999999999999999999999999999999999999999999987 333466677765 4456665443
Q ss_pred -HHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhh-cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHH
Q 013442 340 -KNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALH 417 (443)
Q Consensus 340 -~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~ 417 (443)
+++++.+++++++. |.++...+...+|++|++++... +|++++++|+.+ ..+|++|||++++++.+++++|
T Consensus 327 ~~~l~~~~~~~~~~~-~~~~~~~~~~~~g~tDa~~~~~~gip~v~~g~G~~~------~~aH~~nE~i~i~~~~~~~~~~ 399 (410)
T PRK06133 327 SRALAEHAQGIYGEL-GRRLEPIDMGTGGGTDAAFAAGSGKAAVLEGFGLVG------FGAHSNDEYIELNSIVPRLYLL 399 (410)
T ss_pred hHHHHHHHHHHHHHc-CCCccccccCCCCCchHHHHHhcCCCceEecccCCC------CCCCCCCcEEEcccHHHHHHHH
Confidence 46777777777765 65542112457889999999887 888887778532 3599999999999999999999
Q ss_pred HHHHHHHHhhc
Q 013442 418 ASLATRYLLEN 428 (443)
Q Consensus 418 a~~~~~l~~~~ 428 (443)
++++.++++++
T Consensus 400 ~~~~~~~~~~~ 410 (410)
T PRK06133 400 TRMIMELSRDK 410 (410)
T ss_pred HHHHHHhhcCC
Confidence 99999998753
No 9
>PRK06837 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=1.2e-52 Score=425.60 Aligned_cols=370 Identities=16% Similarity=0.125 Sum_probs=302.5
Q ss_pred cchHHHHhhcCchhHHHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeec--------------------ccCc
Q 013442 35 IPVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFP--------------------VAVT 94 (443)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~--------------------~~~~ 94 (443)
..+++.++++++. +++++++++|++|||+|++|.++++||.++|+++|++++.. ++++
T Consensus 7 ~~~~~~~~i~~~~--~~~~~~l~~li~ipS~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (427)
T PRK06837 7 LTQRILAAVDAGF--DAQVAFTQDLVRFPSTRGAEAPCQDFLARAFRERGYEVDRWSIDPDDLKSHPGAGPVEIDYSGAP 84 (427)
T ss_pred HHHHHHHHHHhhh--HHHHHHHHHHhccCCCCCcHHHHHHHHHHHHHHCCCceEEecCCHHHhhhcccccccccccCCCc
Confidence 4567888899887 99999999999999999999999999999999999998641 2468
Q ss_pred eEEEEECCC--CCcEEEEEEecccccCcccCCCccc----cCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceE
Q 013442 95 GVVGYIGTG--QPPFVALRADMDALAMEESVEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTI 165 (443)
Q Consensus 95 ~via~~~~~--~~~~I~~~~H~DtVp~~~~~~w~~~----~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i 165 (443)
|+++++++. .+|+|+|+||+||||+++.++|+.+ .++||+|||||+ ||+++++|+|+++|++.+..++++|
T Consensus 85 nl~a~~~g~~~~~~~il~~gH~DvVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~~a~l~a~~~l~~~~~~~~~~i 164 (427)
T PRK06837 85 NVVGTYRPAGKTGRSLILQGHIDVVPEGPLDLWSRPPFDPVIVDGWMYGRGAADMKAGLAAMLFALDALRAAGLAPAARV 164 (427)
T ss_pred eEEEEecCCCCCCCeEEEEeecccCCCCCccccccCCCCcEEECCEEEecCcccchHHHHHHHHHHHHHHHcCCCCCCcE
Confidence 999999653 2589999999999999987789644 567899999998 8999999999999999888889999
Q ss_pred EEEEeccCC-ccchHHHHHHcCCCCccceeeEecCCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHH
Q 013442 166 VLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIV 244 (443)
Q Consensus 166 ~~i~~~dEE-g~~G~~~~~~~g~~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~ 244 (443)
.|+|++||| ++.|+..++..+. ..|++++.+ |++.. ...+++|..+++|+++|+++|+|.|+.|.||+.
T Consensus 165 ~~~~~~dEE~~g~g~~~~~~~~~--~~d~~iv~e-----p~~~~---i~~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~ 234 (427)
T PRK06837 165 HFQSVIEEESTGNGALSTLQRGY--RADACLIPE-----PTGEK---LVRAQVGVIWFRLRVRGAPVHVREAGTGANAID 234 (427)
T ss_pred EEEEEeccccCCHhHHHHHhcCc--CCCEEEEcC-----CCCCc---cccccceeEEEEEEEEeeccccCCcccCcCHHH
Confidence 999999999 7778888887765 467777543 33321 223467999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccc-----C-----CCCCceEEEEEEEcCCcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHH
Q 013442 245 AASNVIVSLQHLVSREA-----D-----PLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMK 314 (443)
Q Consensus 245 ~~~~~i~~l~~~~~~~~-----~-----~~~~~t~~v~~i~gG~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~ 314 (443)
.+++++.+|+.+..... . ...+.++|++.|+||...|+||+.|++.+++|+.|+++.+++.++|++.+++
T Consensus 235 ~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~t~ni~~i~gG~~~nvVP~~~~~~~~ir~~p~~~~~~v~~~i~~~~~~ 314 (427)
T PRK06837 235 AAYHLIQALRELEAEWNARKASDPHFEDVPHPINFNVGIIKGGDWASSVPAWCDLDCRIAIYPGVTAADAQAEIEACLAA 314 (427)
T ss_pred HHHHHHHHHHHHHHHHhhcccCCCcccCCCCceeEeeeeEeCCCCCCccCCEEEEEEEEeECCCCCHHHHHHHHHHHHHH
Confidence 99999999987752210 0 1134589999999999999999999999999999999999999999999987
Q ss_pred HHHhh----CCeEEEEeeccCCCCcc--cCCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHh-h-cCcEEEEec
Q 013442 315 QASVQ----RCNATVTFDDKSFYPVT--VNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAE-A-IPGYFYYLG 386 (443)
Q Consensus 315 ~~~~~----~~~~~v~~~~~~~~~~~--~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~~~~-~-ip~~~~~~G 386 (443)
.+... +..+++++. ....+|+ ..|+++++.+.+++++.+|.+.. +...+|++|++++.+ . +|++. ||
T Consensus 315 ~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~a~~~~~g~~~~--~~~~~g~tDa~~~~~~~gip~v~--~G 389 (427)
T PRK06837 315 AARDDRFLSNNPPEVVWS-GFLAEGYVLEPGSEAEAALARAHAAVFGGPLR--SFVTTAYTDTRFYGLYYGIPALC--YG 389 (427)
T ss_pred HHhcChhhhhCCCeEEEE-ecccCCcCCCCCCHHHHHHHHHHHHHhCCCCe--eeEEeeccchHHHhccCCCCEEE--EC
Confidence 54432 223444432 1223334 45578999999999997787653 346788999999975 3 99664 66
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhh
Q 013442 387 MNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLLE 427 (443)
Q Consensus 387 ~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~~~ 427 (443)
||+ ..+|++||+++++++.+++++|+.++.++|.-
T Consensus 390 -----p~~-~~~H~~nE~i~i~~l~~~~~~~~~~l~~~~~~ 424 (427)
T PRK06837 390 -----PSG-EGIHGFDERVDLESVRKVTKTIALFVAEWCGV 424 (427)
T ss_pred -----CCC-CccCCCCceEEHHHHHHHHHHHHHHHHHHhCC
Confidence 443 35999999999999999999999999999853
No 10
>PRK07338 hypothetical protein; Provisional
Probab=100.00 E-value=4e-52 Score=419.23 Aligned_cols=363 Identities=20% Similarity=0.181 Sum_probs=295.0
Q ss_pred chHHHHhhcCchhHHHHHHHHHHHHhCCCCCccc---HHHHHHHHHHHHhCCCCeeecc-----------------cCce
Q 013442 36 PVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQE---FETSKLIRAELDQMGIPYKFPV-----------------AVTG 95 (443)
Q Consensus 36 ~~~~~~~~~~~~~~~~~i~ll~~l~~ipS~s~~E---~~~~~~l~~~l~~~G~~~~~~~-----------------~~~~ 95 (443)
..++.++++++. ++++++|++|++|||+|+++ .++++||+++|+++||+++... .++|
T Consensus 5 ~~~~~~~~~~~~--~~~~~~l~~lv~i~S~s~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~n 82 (402)
T PRK07338 5 ERAVLDLIDDRQ--APMLEQLIAWAAINSGSRNLDGLARMAELLADAFAALPGEIELIPLPPVEVIDADGRTLEQAHGPA 82 (402)
T ss_pred HHHHHHHHhhhH--HHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHHHhCCCcEEEecCCccccccccccccccCcCCe
Confidence 346778888877 99999999999999999764 5799999999999999987521 1268
Q ss_pred EEEEECCCCCcEEEEEEecccccCcccCCCccc---cCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEE
Q 013442 96 VVGYIGTGQPPFVALRADMDALAMEESVEWEHK---SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVF 169 (443)
Q Consensus 96 via~~~~~~~~~I~~~~H~DtVp~~~~~~w~~~---~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~ 169 (443)
++|+++++.+++|+|+||+||||++. .||. .++||+|||||+ ||+++++|+|+++|++.+..++++|.|+|
T Consensus 83 l~a~~~~~~~~~lll~gH~DvVp~~~---~Pf~~~~~~~~g~lyGrG~~DmKgg~aa~l~a~~~l~~~~~~~~~~i~~~~ 159 (402)
T PRK07338 83 LHVSVRPEAPRQVLLTGHMDTVFPAD---HPFQTLSWLDDGTLNGPGVADMKGGIVVMLAALLAFERSPLADKLGYDVLI 159 (402)
T ss_pred EEEEECCCCCccEEEEeecCccCCCC---CcccCCeEeeCCEEECCcHHhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE
Confidence 99999654346899999999999864 3454 267899999997 89999999999999988877889999999
Q ss_pred eccCC-ccchHHHHHHcCCCCccceeeEecCCCCCCCceEEeecCcccccceEEEEEEEecCCCCCC-CCCCCcHHHHHH
Q 013442 170 QPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAI-PQHTIDPIVAAS 247 (443)
Q Consensus 170 ~~dEE-g~~G~~~~~~~g~~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss~-p~~g~NAi~~~~ 247 (443)
++||| |+.|++++++++. .+.++.++.++ ..+.+.+. .+++|..+++|+++|+++|+|. |+.|.||+..++
T Consensus 160 ~~dEE~g~~g~~~~~~~~~-~~~~~~i~~ep--~~~~~~v~----~~~kG~~~~~v~v~G~~aHs~~~p~~g~nAi~~~~ 232 (402)
T PRK07338 160 NPDEEIGSPASAPLLAELA-RGKHAALTYEP--ALPDGTLA----GARKGSGNFTIVVTGRAAHAGRAFDEGRNAIVAAA 232 (402)
T ss_pred ECCcccCChhhHHHHHHHh-ccCcEEEEecC--CCCCCcEE----eecceeEEEEEEEEeEcccCCCCcccCccHHHHHH
Confidence 99999 6789999988754 34567666554 22334432 2357999999999999999995 899999999999
Q ss_pred HHHHHHHHhhccccCCCCCceEEEEEEEcCCcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEe
Q 013442 248 NVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTF 327 (443)
Q Consensus 248 ~~i~~l~~~~~~~~~~~~~~t~~v~~i~gG~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~ 327 (443)
+++.+|+++... ....++|++.|+||.+.|+||++|++++|+|+.|.++.+++.++|++++++.+...+++++++.
T Consensus 233 ~~i~~l~~l~~~----~~~~t~~vg~i~gG~~~nvVP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~ 308 (402)
T PRK07338 233 ELALALHALNGQ----RDGVTVNVAKIDGGGPLNVVPDNAVLRFNIRPPTPEDAAWAEAELKKLIAQVNQRHGVSLHLHG 308 (402)
T ss_pred HHHHHHHhhhcc----CCCcEEEEEEEecCCCCceeccccEEEEEeccCCHHHHHHHHHHHHHHHhccccCCCeEEEEEc
Confidence 999999887422 2346899999999999999999999999999999999999999999999887655566666543
Q ss_pred eccCCCCccc---CCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhh-cCcEEEEecCCCCCCCCCCCCCCCCC
Q 013442 328 DDKSFYPVTV---NNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYF 403 (443)
Q Consensus 328 ~~~~~~~~~~---~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~p~E 403 (443)
...++++. .++++++.++++.++. |.++. ...++|++|++++... +|+++ ++|+ |. ..+|+|||
T Consensus 309 --~~~~~p~~~~~~~~~l~~~~~~~~~~~-g~~~~--~~~~~g~tDa~~~~~~giP~v~-~~Gp-----g~-~~~H~~~E 376 (402)
T PRK07338 309 --GFGRPPKPIDAAQQRLFEAVQACGAAL-GLTID--WKDSGGVCDGNNLAAAGLPVVD-TLGV-----RG-GNIHSEDE 376 (402)
T ss_pred --cccCCCCCCCcchHHHHHHHHHHHHHc-CCCcc--cccCCccchHHHHhhcCCCeEe-ccCC-----CC-CCCCCccc
Confidence 22344443 3457999999888775 87653 3467899999999877 99874 4664 32 45899999
Q ss_pred CCCCCchHHHHHHHHHHHHHHHh
Q 013442 404 RVNEDALPYGAALHASLATRYLL 426 (443)
Q Consensus 404 ~i~i~~l~~~~~~~a~~~~~l~~ 426 (443)
|++++++.+++++|+.++.+++.
T Consensus 377 ~v~i~~l~~~~~~~~~~l~~~~~ 399 (402)
T PRK07338 377 FVILDSLVERAQLSALILMRLAQ 399 (402)
T ss_pred eEehhhHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999874
No 11
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=2.4e-52 Score=417.24 Aligned_cols=355 Identities=19% Similarity=0.213 Sum_probs=288.9
Q ss_pred HHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeec--ccCceEEEEECCCCCcEEEEEEecccccCcccCCCccc
Q 013442 51 WMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFP--VAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWEHK 128 (443)
Q Consensus 51 ~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~--~~~~~via~~~~~~~~~I~~~~H~DtVp~~~~~~w~~~ 128 (443)
++++++++|++|||+|++|.++++||.++|+++||+++.. ++.+|+++++++ ++|+|+|+||+||||+++.++|+++
T Consensus 3 ~~~~~l~~Lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~n~~~~~g~-~~~~i~l~~H~D~Vp~g~~~~w~~~ 81 (375)
T PRK13009 3 DVLELAQDLIRRPSVTPDDAGCQDLLAERLEALGFTCERMDFGDVKNLWARRGT-EGPHLCFAGHTDVVPPGDLEAWTSP 81 (375)
T ss_pred hHHHHHHHHhCCCCCCCchhhHHHHHHHHHHHcCCeEEEeccCCCcEEEEEecC-CCCEEEEEeecccCCCCCcccCCCC
Confidence 5789999999999999999999999999999999998752 346799999843 4699999999999999988889654
Q ss_pred ----cCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCCc-c-chHHHHHHcCC--CCccceeeEe
Q 013442 129 ----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEG-G-GGAKKMLDAGA--LENVEAIFGL 197 (443)
Q Consensus 129 ----~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEEg-~-~G~~~~~~~g~--~~~~d~~i~~ 197 (443)
.++||++||||+ ||+++++++|+++|++.+..++++|.|+|++|||+ + .|++.+++... ...+|++++.
T Consensus 82 Pf~~~~~~g~iyGrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~i~~~~~~~EE~~~~~G~~~~~~~~~~~~~~~d~~i~~ 161 (375)
T PRK13009 82 PFEPTIRDGMLYGRGAADMKGSLAAFVVAAERFVAAHPDHKGSIAFLITSDEEGPAINGTVKVLEWLKARGEKIDYCIVG 161 (375)
T ss_pred CCCcEEECCEEEecCCccChHHHHHHHHHHHHHHHhcCCCCceEEEEEEeecccccccCHHHHHHHHHHcCcCCCEEEEc
Confidence 467899999998 89999999999999988778899999999999994 3 59998876421 1246888766
Q ss_pred cCCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHHhhcccc-CCCCCceEEEEEEEc
Q 013442 198 HVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREA-DPLDSQVLTVAKFEG 276 (443)
Q Consensus 198 ~~~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~~~~~~~-~~~~~~t~~v~~i~g 276 (443)
++......+.. ...+++|..+++|+++|+++|++.|+.|.||+..+++++.+|+.+..+.. ..+.+.+++++.|+|
T Consensus 162 ep~~~~~~~~~---i~~g~~g~~~~~i~v~G~~~Ha~~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~i~~i~~ 238 (375)
T PRK13009 162 EPTSTERLGDV---IKNGRRGSLTGKLTVKGVQGHVAYPHLADNPIHLAAPALAELAATEWDEGNEFFPPTSLQITNIDA 238 (375)
T ss_pred CCCcccCCCCe---EEEecceEEEEEEEEEecCcccCCCCcccCHHHHHHHHHHHHHhhhccCCCccCCCceEEEEEEec
Confidence 54322222211 12345799999999999999999999999999999999999987643222 234567899999999
Q ss_pred CC-cCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcccC-CHHHHHHHHHHHHHhc
Q 013442 277 GG-AFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVN-NKNLHEHFQKVAADML 354 (443)
Q Consensus 277 G~-~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-d~~~~~~~~~~~~~~~ 354 (443)
|. ..|+||++|++.+|+|++|..+.+++.++|++.+++ .++++++++ ...++|+.. ++++++.+.+++++.+
T Consensus 239 G~~~~nvip~~~~~~~diR~~~~~~~e~i~~~i~~~~~~----~~~~~~~~~--~~~~~p~~~~~~~~~~~l~~a~~~~~ 312 (375)
T PRK13009 239 GTGATNVIPGELEAQFNFRFSTEHTAESLKARVEAILDK----HGLDYTLEW--TLSGEPFLTPPGKLVDAVVAAIEAVT 312 (375)
T ss_pred CCCCCcccCCcEEEEEEEecCCCCCHHHHHHHHHHHHHh----cCCCeEEEE--ecCCCcccCCCcHHHHHHHHHHHHHh
Confidence 86 789999999999999999999999999999999874 356677765 333444433 3789999999999887
Q ss_pred CCcccccCCCCCCCchHHHHHhh-cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 013442 355 GVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYL 425 (443)
Q Consensus 355 g~~~~~~~~~~~g~tDa~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~ 425 (443)
|.++. ....+|++|++++.+. +|++. || ||. ..+|++|||++++++.+++++|+.++.+|+
T Consensus 313 g~~~~--~~~~~g~tda~~~~~~g~p~v~--~G-----p~~-~~~H~~~E~i~~~~l~~~~~~~~~~~~~~~ 374 (375)
T PRK13009 313 GITPE--LSTSGGTSDARFIADYGAQVVE--FG-----PVN-ATIHKVNECVSVADLEKLTRIYERILERLL 374 (375)
T ss_pred CCCce--eeccCCCccHHHHHHcCCCeEE--ec-----cCc-ccCCCCCCcEEHHHHHHHHHHHHHHHHHHh
Confidence 88763 3356788999999886 78654 56 443 359999999999999999999999999886
No 12
>PRK13004 peptidase; Reviewed
Probab=100.00 E-value=1.2e-52 Score=422.21 Aligned_cols=368 Identities=18% Similarity=0.194 Sum_probs=297.5
Q ss_pred hHHHHhhcCchhHHHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeecccCceEEEEECCCCCcEEEEEEeccc
Q 013442 37 VKFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDA 116 (443)
Q Consensus 37 ~~~~~~~~~~~~~~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~~~~~I~~~~H~Dt 116 (443)
+++.++++++. +++++++++|++|||+|++|.++++||.++|+++||++...+.+.|+++++++++ |+|+|++|+||
T Consensus 4 ~~~~~~~~~~~--~~~~~~l~~lv~ips~s~~e~~~a~~l~~~l~~~G~~~~~~~~~~n~~a~~~~~~-~~i~~~~H~Dt 80 (399)
T PRK13004 4 KLILMLAEKYK--ADMTRFLRDLIRIPSESGDEKRVVKRIKEEMEKVGFDKVEIDPMGNVLGYIGHGK-KLIAFDAHIDT 80 (399)
T ss_pred HHHHHHHHHHH--HHHHHHHHHHhcCCCCCCchHHHHHHHHHHHHHcCCcEEEEcCCCeEEEEECCCC-cEEEEEeccCc
Confidence 57788888887 9999999999999999999999999999999999998544345678999997654 89999999999
Q ss_pred ccCcccCCCccc----cCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-c-cchHHHHHHcCC
Q 013442 117 LAMEESVEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-G-GGGAKKMLDAGA 187 (443)
Q Consensus 117 Vp~~~~~~w~~~----~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g-~~G~~~~~~~g~ 187 (443)
||+++..+|+++ .++||+|||||+ |++++++|+|+++|++.+..++++|.|+|++||| + +.|++++++++.
T Consensus 81 Vp~~~~~~w~~~P~~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~~EE~~~g~~~~~~~~~~~ 160 (399)
T PRK13004 81 VGIGDIKNWDFDPFEGEEDDGRIYGRGTSDQKGGMASMVYAAKIIKDLGLDDEYTLYVTGTVQEEDCDGLCWRYIIEEDK 160 (399)
T ss_pred cCCCChhhcccCCCccEEECCEEEeCCccccchHHHHHHHHHHHHHhcCCCCCCeEEEEEEcccccCcchhHHHHHHhcC
Confidence 999887789754 467899999998 7999999999999999887889999999999999 3 467888888654
Q ss_pred CCccceeeEecCCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHHhhcc--ccCCCC
Q 013442 188 LENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSR--EADPLD 265 (443)
Q Consensus 188 ~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~~~~~--~~~~~~ 265 (443)
+ ++|++++.++.. ..+. .+++|..+++|+++|+++|++.|+.|.||+..+++++.+|+.+... .....+
T Consensus 161 ~-~~d~~i~~e~~~----~~i~----~~~~G~~~~~v~v~G~~~Ha~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~ 231 (399)
T PRK13004 161 I-KPDFVVITEPTD----LNIY----RGQRGRMEIRVETKGVSCHGSAPERGDNAIYKMAPILNELEELNPNLKEDPFLG 231 (399)
T ss_pred C-CCCEEEEccCCC----CceE----EecceEEEEEEEEeccccccCCCCCCCCHHHHHHHHHHHHHhhccccccCCcCC
Confidence 4 468888754321 2222 2457999999999999999999999999999999999999987543 222334
Q ss_pred CceEEEEEEEcC-CcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEee-----------ccCCC
Q 013442 266 SQVLTVAKFEGG-GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFD-----------DKSFY 333 (443)
Q Consensus 266 ~~t~~v~~i~gG-~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~-----------~~~~~ 333 (443)
..+++++.|.+| .+.|+||++|++.+|+|++|.++.+++.++|+++... ...+.++++... ....+
T Consensus 232 ~~~~~v~~i~~g~~~~nvvP~~~~~~~diR~~~~~~~~~v~~~i~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 309 (399)
T PRK13004 232 KGTLTVSDIFSTSPSRCAVPDSCAISIDRRLTVGETWESVLAEIRALPAV--KKANAKVSMYNYDRPSYTGLVYPTECYF 309 (399)
T ss_pred CceEEEeeeecCCCCCCccCCEEEEEEEEcCCCCCCHHHHHHHHHHHHhh--ccccceEEEecccCCCcccccccccccc
Confidence 568999999876 5899999999999999999999999999999998432 223444433210 01224
Q ss_pred Ccc--cCCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHh-h-cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCc
Q 013442 334 PVT--VNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAE-A-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDA 409 (443)
Q Consensus 334 ~~~--~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~~~~-~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~ 409 (443)
|++ +.++++++.+.+++++.+|.++. ....++++|++.+.+ . +|++. +| ||....+|++||++++++
T Consensus 310 p~~~~~~~~~~~~~l~~a~~~~~g~~~~--~~~~~~~td~~~~~~~~Gip~v~--~G-----pg~~~~aH~~nE~i~i~~ 380 (399)
T PRK13004 310 PTWLYPEDHEFVKAAVEAYKGLFGKAPE--VDKWTFSTNGVSIAGRAGIPTIG--FG-----PGKEPLAHAPNEYTWKEQ 380 (399)
T ss_pred cccccCCCCHHHHHHHHHHHHHhCCCCe--ecccccccCCeEEehhcCCCEEE--EC-----CCcccccCCCCceeEHHH
Confidence 544 45688999999999998887663 235667788877754 4 89764 56 555567999999999999
Q ss_pred hHHHHHHHHHHHHHHHhh
Q 013442 410 LPYGAALHASLATRYLLE 427 (443)
Q Consensus 410 l~~~~~~~a~~~~~l~~~ 427 (443)
+.+++++|+.++.+||++
T Consensus 381 l~~~~~~~~~~~~~~~~~ 398 (399)
T PRK13004 381 LVKAAAMYAAIPKSLLKK 398 (399)
T ss_pred HHHHHHHHHHHHHHHhhc
Confidence 999999999999999953
No 13
>PRK13983 diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=2.4e-52 Score=420.82 Aligned_cols=359 Identities=18% Similarity=0.201 Sum_probs=292.6
Q ss_pred HHHHHHHHHHHhCCCCCc-----ccHHHHHHHHHHHHhCCCC-eeecc-------c--CceEEEEECCC-CCcEEEEEEe
Q 013442 50 YWMVNIRRKIHENPELGF-----QEFETSKLIRAELDQMGIP-YKFPV-------A--VTGVVGYIGTG-QPPFVALRAD 113 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~-----~E~~~~~~l~~~l~~~G~~-~~~~~-------~--~~~via~~~~~-~~~~I~~~~H 113 (443)
+++++++++|++|||+|+ +|.++++||.++|+++||+ ++... . ++|+++++++. ++++|+|+||
T Consensus 5 ~~~~~~l~~lv~i~s~s~~~~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~nl~~~~~g~~~~~~lll~~H 84 (400)
T PRK13983 5 DEMIELLSELIAIPAVNPDFGGEGEKEKAEYLESLLKEYGFDEVERYDAPDPRVIEGVRPNIVAKIPGGDGKRTLWIISH 84 (400)
T ss_pred HHHHHHHHHHhCcCCCCCCCCCccHHHHHHHHHHHHHHcCCceEEEEecCCcccccCCCccEEEEecCCCCCCeEEEEee
Confidence 789999999999999984 4889999999999999998 76421 1 58999999654 3479999999
Q ss_pred cccccCcccCCCccc----cCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-cc-chHHHHHH
Q 013442 114 MDALAMEESVEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG-GGAKKMLD 184 (443)
Q Consensus 114 ~DtVp~~~~~~w~~~----~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~-~G~~~~~~ 184 (443)
+||||+++.+.|+++ .+++|+|||||+ |+++++++.|+++|++.+..++++|.|+|++||| |+ .|++++++
T Consensus 85 ~Dtvp~~~~~~W~~~p~~~~~~~g~lyGrG~~D~K~g~~a~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~~g~~~~~~ 164 (400)
T PRK13983 85 MDVVPPGDLSLWETDPFKPVVKDGKIYGRGSEDNGQGIVSSLLALKALMDLGIRPKYNLGLAFVSDEETGSKYGIQYLLK 164 (400)
T ss_pred ccccCCCCcccccCCCCcceeeCCEEEecCccCccchHHHHHHHHHHHHHhCCCCCCcEEEEEEeccccCCcccHHHHHh
Confidence 999999988889654 467899999997 8999999999999999888899999999999999 65 58999998
Q ss_pred c--CCCCccceeeEecCCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHH-hhccc-
Q 013442 185 A--GALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQH-LVSRE- 260 (443)
Q Consensus 185 ~--g~~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~-~~~~~- 260 (443)
. +.+.+.|++++. +.+.|++... ..+++|..+++|+++|+++|+|.|+.|+||+..+++++.++++ +....
T Consensus 165 ~~~~~~~~~d~~i~~--~~~~~~~~~i---~~~~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~ 239 (400)
T PRK13983 165 KHPELFKKDDLILVP--DAGNPDGSFI---EIAEKSILWLKFTVKGKQCHASTPENGINAHRAAADFALELDEALHEKFN 239 (400)
T ss_pred hcccccCCCCEEEEe--cCCCCCCcee---EEeecceEEEEEEEEeEccccCCCCCCCCHHHHHHHHHHHHHHHHHhhhc
Confidence 6 556667877763 3345666521 2346799999999999999999999999999999999999987 42211
Q ss_pred -cCC-C--CCceEEEEEEEcC-CcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeec-cCCCC
Q 013442 261 -ADP-L--DSQVLTVAKFEGG-GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDD-KSFYP 334 (443)
Q Consensus 261 -~~~-~--~~~t~~v~~i~gG-~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~-~~~~~ 334 (443)
.++ . ...+++++.+.+| ...|+||++|++++|+|++|+.+.++++++|++.++..+...+.+++++... ..+.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~g~~~~nvvp~~~~~~~diR~~p~~~~~~v~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~ 319 (400)
T PRK13983 240 AKDPLFDPPYSTFEPTKKEANVDNINTIPGRDVFYFDCRVLPDYDLDEVLKDIKEIADEFEEEYGVKIEVEIVQREQAPP 319 (400)
T ss_pred ccccccCCCCcccccceeecCCcCCcccCCeeEEEEEEEeCCCCCHHHHHHHHHHHHHHhccccCcceeEEEeeccCCcc
Confidence 111 1 2346788888887 5899999999999999999999999999999999998766666667776521 11233
Q ss_pred cccCCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhh-cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHH
Q 013442 335 VTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYG 413 (443)
Q Consensus 335 ~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~ 413 (443)
+.+.|+++++.+.+++++.+|.++. ....+|++|+.++... +|++++ | ||+ ..+|++||+++++++.++
T Consensus 320 ~~~~~~~~v~~l~~a~~~~~g~~~~--~~~~~g~td~~~~~~~gip~v~~--G-----p~~-~~~H~~nE~v~i~~l~~~ 389 (400)
T PRK13983 320 PTPPDSEIVKKLKRAIKEVRGIEPK--VGGIGGGTVAAFLRKKGYPAVVW--S-----TLD-ETAHQPNEYAKISNLIED 389 (400)
T ss_pred CCCCCcHHHHHHHHHHHHhcCCCce--eeeecCcHHHHHHHHcCCCEEEe--C-----Ccc-ccCCCCCceeeHHHHHHH
Confidence 4567788999999999998888764 3457888999999876 998764 5 444 369999999999999999
Q ss_pred HHHHHHHHHH
Q 013442 414 AALHASLATR 423 (443)
Q Consensus 414 ~~~~a~~~~~ 423 (443)
+++|++++.+
T Consensus 390 ~~~~~~~~~~ 399 (400)
T PRK13983 390 AKVFALLLLE 399 (400)
T ss_pred HHHHHHHHhc
Confidence 9999998763
No 14
>PRK08596 acetylornithine deacetylase; Validated
Probab=100.00 E-value=4.8e-52 Score=420.38 Aligned_cols=370 Identities=17% Similarity=0.169 Sum_probs=296.9
Q ss_pred HHHHhhcCchhHHHHHHHHHHHHhCCCCCc---ccHHHHHHHHHHHHhCCCCeeec---ccCceEEEEECCC-C--CcEE
Q 013442 38 KFLDFAKKPEIFYWMVNIRRKIHENPELGF---QEFETSKLIRAELDQMGIPYKFP---VAVTGVVGYIGTG-Q--PPFV 108 (443)
Q Consensus 38 ~~~~~~~~~~~~~~~i~ll~~l~~ipS~s~---~E~~~~~~l~~~l~~~G~~~~~~---~~~~~via~~~~~-~--~~~I 108 (443)
++.+++++.. +++++++++|++|||+|+ +|.++++||+++|+++||+++.. ++++|++++++++ + +|+|
T Consensus 3 ~~~~~i~~~~--~~~~~~l~~Lv~i~S~s~~~~~e~~~a~~l~~~l~~~G~~~~~~~~~~~~~nvia~~~g~~~~~~~~l 80 (421)
T PRK08596 3 QLLEQIELRK--DELLELLKTLVRFETPAPPARNTNEAQEFIAEFLRKLGFSVDKWDVYPNDPNVVGVKKGTESDAYKSL 80 (421)
T ss_pred HHHHHHHhhH--HHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHHCCCeEEEEEccCCCceEEEEecCCCCCCCcEE
Confidence 3566777766 889999999999999994 67889999999999999998762 4578999999653 2 2689
Q ss_pred EEEEecccccCcccCCCccc----cCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchHH
Q 013442 109 ALRADMDALAMEESVEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAK 180 (443)
Q Consensus 109 ~~~~H~DtVp~~~~~~w~~~----~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~ 180 (443)
+|+||+||||+++..+|+++ .++||+|||||+ ||+++++++|+++|++.+..++++|.|+|++||| ++.|++
T Consensus 81 ll~~H~DtVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~G~~ 160 (421)
T PRK08596 81 IINGHMDVAEVSADEAWETNPFEPTIKDGWLYGRGAADMKGGLAGALFAIQLLHEAGIELPGDLIFQSVIGEEVGEAGTL 160 (421)
T ss_pred EEeccccccCCCCccccccCCCCcEEECCEEEeccccccchHHHHHHHHHHHHHHcCCCCCCcEEEEEEeccccCCcCHH
Confidence 99999999999988789654 467999999998 8999999999999999888899999999999999 678999
Q ss_pred HHHHcCCCCccceeeEecCCCCCCCceEEeecCcccccceEEEEEEEec----------CCCCCCCCCCCcHHHHHHHHH
Q 013442 181 KMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGK----------GGHAAIPQHTIDPIVAASNVI 250 (443)
Q Consensus 181 ~~~~~g~~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~----------~aHss~p~~g~NAi~~~~~~i 250 (443)
++++++. .+|++++.++ ++.. ..+++|..++.++++|+ .+|++.|+.|.||+..+++++
T Consensus 161 ~~~~~~~--~~d~~i~~ep-----~~~~----~~~~~G~~~~~~~v~g~~~~~~~~~~~~~H~~~p~~G~nai~~~~~~i 229 (421)
T PRK08596 161 QCCERGY--DADFAVVVDT-----SDLH----MQGQGGVITGWITVKSPQTFHDGTRRQMIHAGGGLFGASAIEKMMKII 229 (421)
T ss_pred HHHhcCC--CCCEEEECCC-----CCCc----cccccceeeEEEEEEeecccccccccccccccCCccCcCHHHHHHHHH
Confidence 9998864 4677776543 2221 12356777777777775 479999999999999999999
Q ss_pred HHHHHhhcc-----ccC--CCCCceEEEEEEEcCCcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhh----
Q 013442 251 VSLQHLVSR-----EAD--PLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQ---- 319 (443)
Q Consensus 251 ~~l~~~~~~-----~~~--~~~~~t~~v~~i~gG~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~---- 319 (443)
.+|+.+... ... ..+..++|++.|+||...|+||++|++.+|+|+.|+++.+++.++|++.+++.+...
T Consensus 230 ~~l~~~~~~~~~~~~~~~~~~~~~t~~v~~i~gG~~~nvvP~~~~~~~d~R~~p~~~~~~v~~~i~~~~~~~~~~~~~~~ 309 (421)
T PRK08596 230 QSLQELERHWAVMKSYPGFPPGTNTINPAVIEGGRHAAFIADECRLWITVHFYPNETYEQVIKEIEEYIGKVAAADPWLR 309 (421)
T ss_pred HHHHHHHHHHhhcccCccCCCCCcceeeeeeeCCCCCCccCceEEEEEEeeeCCCCCHHHHHHHHHHHHHHHHhcChhhh
Confidence 999876421 111 124578999999999999999999999999999999999999999999998754311
Q ss_pred CCeEEEEee-----c--cCCCCcc--cCCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhh-cCcEEEEecCCC
Q 013442 320 RCNATVTFD-----D--KSFYPVT--VNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMND 389 (443)
Q Consensus 320 ~~~~~v~~~-----~--~~~~~~~--~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~~~~~-ip~~~~~~G~~~ 389 (443)
...+++++. . ...+|++ +.++++++.+.+++++.+|.++. ....+++||++++... +|++. +|
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~a~~~~~g~~~~--~~~~~g~tD~~~~~~~gip~v~--~G--- 382 (421)
T PRK08596 310 ENPPQFKWGGESMIEDRGEIFPSLEIDSEHPAVKTLSSAHESVLSKNAI--LDMSTTVTDGGWFAEFGIPAVI--YG--- 382 (421)
T ss_pred hCCceeEEecccccccccccCCCccCCCCchHHHHHHHHHHHHhCCCCe--eeEEeeecchhhhhhcCCCEEE--EC---
Confidence 001222210 0 1234554 45678999999999998887662 3456788999999877 99765 45
Q ss_pred CCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhhcC
Q 013442 390 ETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLLENQ 429 (443)
Q Consensus 390 ~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~~~~~ 429 (443)
||....+|++||+++++++.+++++|+.++.++|..++
T Consensus 383 --pg~~~~~H~~~E~v~i~~~~~~~~~~~~~l~~~~~~~~ 420 (421)
T PRK08596 383 --PGTLEEAHSVNEKVEIEQLIEYTKVITAFIYEWCHTKK 420 (421)
T ss_pred --CCcccccCCCCceEEHHHHHHHHHHHHHHHHHHhCCCC
Confidence 55556799999999999999999999999999997653
No 15
>TIGR03320 ygeY M20/DapE family protein YgeY. Members of this protein family, including the YgeY protein of Escherichia coli, typically are found in extended genomic regions associated with purine catabolism. Homologs include peptidases and deacylases of the M20/M25 /M40 and DapE/ArgE families. The function is unknown.
Probab=100.00 E-value=3.9e-52 Score=418.11 Aligned_cols=364 Identities=18% Similarity=0.211 Sum_probs=290.6
Q ss_pred hHHHHhhcCchhHHHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeecccCceEEEEECCCCCcEEEEEEeccc
Q 013442 37 VKFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDA 116 (443)
Q Consensus 37 ~~~~~~~~~~~~~~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~~~~~I~~~~H~Dt 116 (443)
+++.+.++++. +++++++++|++|||+|++|.++++||.++|+++||++.......|+++.++. ++|+|+|+||+||
T Consensus 2 ~~~~~~i~~~~--~~~~~~~~~lv~i~s~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~n~~~~~g~-~~~~l~l~~H~Dt 78 (395)
T TIGR03320 2 NQIKSEAKKYR--GDMIRFLRDLVAIPSESGDEKRVAERIKEEMEKLGFDKVEIDPMGNVLGYIGH-GPKLIAMDAHIDT 78 (395)
T ss_pred chHHHHHHHHH--HHHHHHHHHHHcCCCCCCchHHHHHHHHHHHHHhCCcEEEECCCCCEEEEeCC-CCcEEEEEecccc
Confidence 46777888777 99999999999999999999999999999999999984322345689999853 3489999999999
Q ss_pred ccCcccCCCccc----cCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCCcc--chHHHHHHcCC
Q 013442 117 LAMEESVEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGG--GGAKKMLDAGA 187 (443)
Q Consensus 117 Vp~~~~~~w~~~----~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEEg~--~G~~~~~~~g~ 187 (443)
||+++..+|+++ .++||++||||+ ||+++++++|+++|++.+..+++++.|++++|||.+ .+.++++++..
T Consensus 79 Vp~~~~~~w~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~A~~~l~~~g~~~~~~i~~~~~~dEE~~~g~~~~~~~~~~~ 158 (395)
T TIGR03320 79 VGIGDSKQWQFDPYEGYEDEEIIYGRGASDQEGGIASMVYAGKIIKDLGLLDDYTLLVTGTVQEEDCDGLCWQYIIEEDG 158 (395)
T ss_pred cCCCCccccccCCCceEEECCEEEecCccCccchHHHHHHHHHHHHHcCCCCCceEEEEecccccccCchHHHHHHHhcC
Confidence 999988889764 367899999997 899999999999999988778889999999999932 44567776543
Q ss_pred CCccceeeEecCCCCCCCc-eEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHHhhccc-cCC-C
Q 013442 188 LENVEAIFGLHVSSLFPVG-TVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSRE-ADP-L 264 (443)
Q Consensus 188 ~~~~d~~i~~~~~~~~~~g-~~~~~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~~~~~~-~~~-~ 264 (443)
+ .+|++++.+ |++ .+ ..+++|..+++|+++|+++|+|.|+.|.||+..+++++..|+++.... .++ .
T Consensus 159 ~-~~d~~iv~e-----p~~~~i----~~g~~G~~~~~v~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~ 228 (395)
T TIGR03320 159 I-KPEFVVITE-----PTDMNI----YRGQRGRMEIKVTVKGVSCHGSAPERGDNAIYKMAPILKELSQLNANLVEDPFL 228 (395)
T ss_pred C-CCCEEEEcC-----CCccce----EEecceEEEEEEEEeeeccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCccc
Confidence 3 468887654 322 22 234689999999999999999999999999999999999998875322 122 3
Q ss_pred CCceEEEEEEEcCC-cCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeecc-------------
Q 013442 265 DSQVLTVAKFEGGG-AFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDK------------- 330 (443)
Q Consensus 265 ~~~t~~v~~i~gG~-~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~------------- 330 (443)
+..+++++.|++|. ..|+||++|++.+|+|++|+.+.+++.++|++.+... +..+++++...
T Consensus 229 ~~~t~~v~~i~~g~~~~NviP~~~~~~~diR~~p~~~~~~i~~~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 304 (395)
T TIGR03320 229 GKGTLTVSEIFFSSPSRCAVADGCTISIDRRLTWGETWEYALEQIRNLPAVQ----GAEAKVEMYNYDRPSYTGLVYPTE 304 (395)
T ss_pred CcCceeeeeeecCCCCcCccCCEEEEEEEEecCCCCCHHHHHHHHHHHHhhc----CCCceEeeeccCcccccccccccc
Confidence 45689999999885 8999999999999999999999999999999986532 22333332100
Q ss_pred CCCCcc--cCCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHH-HHHhh-cCcEEEEecCCCCCCCCCCCCCCCCCCCC
Q 013442 331 SFYPVT--VNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFS-FFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVN 406 (443)
Q Consensus 331 ~~~~~~--~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~-~~~~~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~ 406 (443)
..+|++ +.++++++.+.+++++++|.++. ....++++|+. ++.+. +|++. +| ||+...+|++|||++
T Consensus 305 ~~~~~~~~~~~~~~v~~l~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~g~p~v~--~G-----pg~~~~aH~~nE~v~ 375 (395)
T TIGR03320 305 CYFPTWVLPEDHLITKAALETYKRLFGKEPG--VDKWTFSTNGVSIMGRHGIPVIG--FG-----PGDEDQAHAPNEKTW 375 (395)
T ss_pred cccCccccCCCCHHHHHHHHHHHHHhCCCCc--eeecceecccceehhhcCCCEEE--EC-----CCchhhccCCCcEEE
Confidence 124444 45688999999999998887663 23566777874 45555 89764 56 666678999999999
Q ss_pred CCchHHHHHHHHHHHHHHHh
Q 013442 407 EDALPYGAALHASLATRYLL 426 (443)
Q Consensus 407 i~~l~~~~~~~a~~~~~l~~ 426 (443)
++++.+++++|++++.++|.
T Consensus 376 i~~l~~~~~~~~~~~~~~~~ 395 (395)
T TIGR03320 376 KEDLVRAAAMYAAIPTVYLE 395 (395)
T ss_pred HHHHHHHHHHHHHHHHHhhC
Confidence 99999999999999999983
No 16
>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase. SelD, selenophosphate synthase, is the selenium donor protein for both selenocysteine and selenouridine biosynthesis systems, but it occurs also in a few prokaryotes that have neither of those pathways. The method of partial phylogenetic profiling, starting from such orphan-selD genomes, identifies this protein as one of those most strongly correlated to SelD occurrence. Its distribution is also well correlated with that of family TIGR03309, a putative accessory protein of labile selenium (non-selenocysteine) enzyme maturation. This family includes the uncharacterized YgeY of Escherichia coli, and belongs to a larger family of metalloenzymes in which some are known peptidases, others enzymes of different types.
Probab=100.00 E-value=4.8e-52 Score=417.35 Aligned_cols=366 Identities=18% Similarity=0.206 Sum_probs=291.8
Q ss_pred hHHHHhhcCchhHHHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeecccCceEEEEECCCCCcEEEEEEeccc
Q 013442 37 VKFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDA 116 (443)
Q Consensus 37 ~~~~~~~~~~~~~~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~~~~~I~~~~H~Dt 116 (443)
+++.+++++++ +++++++++|++|||+|++|.++++||.++|+++||++...+...|+++.++++ .|+|+|+||+||
T Consensus 2 ~~~~~~~~~~~--~~~~~~l~~Lv~ips~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~v~~~~g~~-~~~l~l~~H~Dt 78 (395)
T TIGR03526 2 NQIKSEAEKYR--GDMIRFLRDLVAIPSESGDEGRVALRIKQEMEKLGFDKVEIDPMGNVLGYIGHG-PKLIAMDAHIDT 78 (395)
T ss_pred chHHHHHHHHH--HHHHHHHHHHhcCCCCCCchHHHHHHHHHHHHHcCCceEEEcCCCcEEEEeCCC-CCEEEEEeeccc
Confidence 35777788877 899999999999999999999999999999999999853333346899998543 489999999999
Q ss_pred ccCcccCCCccc----cCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC--ccchHHHHHHcCC
Q 013442 117 LAMEESVEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE--GGGGAKKMLDAGA 187 (443)
Q Consensus 117 Vp~~~~~~w~~~----~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE--g~~G~~~~~~~g~ 187 (443)
||+++...|+++ .++||++||||+ ||+++++|+|+++|++.+..+++++.|++++||| ++.|+.++++++.
T Consensus 79 Vp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~g~~~~~~~~~~~ 158 (395)
T TIGR03526 79 VGIGDMDQWQFDPYEGYEDEEIIYGRGASDQEGGIASMVYAGKIIKDLGLLDDYTLLVTGTVQEEDCDGLCWQYIIEEDK 158 (395)
T ss_pred cCCCCcccccCCCCceEEECCEEEecCccccchhHHHHHHHHHHHHHcCCCCCceEEEEEecccccCCcHhHHHHHhccC
Confidence 999988899764 357899999996 9999999999999999887778899999999999 3456778887655
Q ss_pred CCccceeeEecCCCCCCCc-eEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHHhhccc-cCC-C
Q 013442 188 LENVEAIFGLHVSSLFPVG-TVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSRE-ADP-L 264 (443)
Q Consensus 188 ~~~~d~~i~~~~~~~~~~g-~~~~~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~~~~~~-~~~-~ 264 (443)
+ ..|++++.+ |++ .+. .+++|..+++|+++|+++|++.|+.|.||+..+++++.+|+++.... .++ .
T Consensus 159 ~-~~d~~i~~e-----p~~~~i~----~g~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~ 228 (395)
T TIGR03526 159 I-KPEFVVITE-----PTDMNIY----RGQRGRMEIKVTVKGVSCHGSAPERGDNAIYKMAPILKELSQLNANLVEDPFL 228 (395)
T ss_pred C-CCCEEEecC-----CCCceEE----EEcceEEEEEEEEecCCCccCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCccc
Confidence 4 468887644 332 222 34689999999999999999999999999999999999998875322 122 3
Q ss_pred CCceEEEEEEEcCC-cCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeecc-----------CC
Q 013442 265 DSQVLTVAKFEGGG-AFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDK-----------SF 332 (443)
Q Consensus 265 ~~~t~~v~~i~gG~-~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~-----------~~ 332 (443)
+..++|++.|++|. +.|+||+.|++++|+|++|+++.+++.++|++.++.. ..+.++++..... ..
T Consensus 229 ~~~~~~v~~i~~g~~~~nviP~~~~~~~d~R~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (395)
T TIGR03526 229 GKGTLTVSEIFFSSPSRCAVADGCTISIDRRLTWGETWEYALEQIRNLPAVQ--GAEAEVEMYEYDRPSYTGLVYPTECY 306 (395)
T ss_pred CccceeeeeeecCCCCCCccCCeEEEEEEEecCCCCCHHHHHHHHHHHHHhc--CCcceEEEeccccccccccccccccc
Confidence 45799999999875 8999999999999999999999999999999987542 1123333221000 12
Q ss_pred CCcc--cCCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHH-HHhh-cCcEEEEecCCCCCCCCCCCCCCCCCCCCCC
Q 013442 333 YPVT--VNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSF-FAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNED 408 (443)
Q Consensus 333 ~~~~--~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~-~~~~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~ 408 (443)
+|++ +.++++++.+.+++++.+|..+. ....++++|++. +.+. +|++. +| ||+...+|++|||++++
T Consensus 307 ~p~~~~~~~~~~~~~l~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~g~p~v~--~G-----pg~~~~aH~~dE~i~i~ 377 (395)
T TIGR03526 307 FPTWVLPEDHLITKAALETYKRLFGKEPG--VDKWTFSTNGVSIMGRHGIPVIG--FG-----PGDEDQAHAPNEKTWKE 377 (395)
T ss_pred cCccccCCCCHHHHHHHHHHHHHhCCCCc--eeeeeeecccceehhhcCCCEEE--EC-----CcchhhccCCCceEEHH
Confidence 3443 45788999999999998887653 234567778754 4455 89764 56 66667899999999999
Q ss_pred chHHHHHHHHHHHHHHHh
Q 013442 409 ALPYGAALHASLATRYLL 426 (443)
Q Consensus 409 ~l~~~~~~~a~~~~~l~~ 426 (443)
++.+++++|++++..||+
T Consensus 378 ~l~~~~~~~~~~~~~~~~ 395 (395)
T TIGR03526 378 DLVKAAAMYAAIPTVYLQ 395 (395)
T ss_pred HHHHHHHHHHHHHHHhcC
Confidence 999999999999999873
No 17
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade. This model describes a proteobacterial subset of succinyl-diaminopimelate desuccinylases. An experimentally confirmed Gram-positive lineage succinyl-diaminopimelate desuccinylase has been described for Corynebacterium glutamicum, and a neighbor-joining tree shows the seed members, SP:Q59284, and putative archaeal members such as TrEMBL:O58003 in a single clade. However, the archaeal members differ substantially, share a number of motifs with acetylornithine deacetylases rather than succinyl-diaminopimelate desuccinylases, and are not taken as trusted examples of succinyl-diaminopimelate desuccinylases. This model is limited to proteobacterial members for this reason.
Probab=100.00 E-value=1.6e-51 Score=410.38 Aligned_cols=352 Identities=19% Similarity=0.216 Sum_probs=283.5
Q ss_pred HHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeec--ccCceEEEEECCCCCcEEEEEEecccccCcccCCCccc--
Q 013442 53 VNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFP--VAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWEHK-- 128 (443)
Q Consensus 53 i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~--~~~~~via~~~~~~~~~I~~~~H~DtVp~~~~~~w~~~-- 128 (443)
++++++|++|||+|++|.++++||+++|+++||++++. .+++|+++++++ .+|+|+|+||+||||+++.++|+++
T Consensus 2 ~~~l~~lv~ips~s~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~~~~~~g~-~~~~i~~~~H~DtVp~~~~~~W~~~p~ 80 (370)
T TIGR01246 2 TELAKELISRPSVTPNDAGCQDIIAERLEKLGFEIEWMHFGDTKNLWATRGT-GEPVLAFAGHTDVVPAGPEEQWSSPPF 80 (370)
T ss_pred hHHHHHHhcCCCCCcchHHHHHHHHHHHHHCCCEEEEEecCCCceEEEEecC-CCcEEEEEccccccCCCCccccccCCC
Confidence 57899999999999999999999999999999998752 346789998754 4599999999999999987889643
Q ss_pred --cCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-cc-chHHHHHHcCC--CCccceeeEecC
Q 013442 129 --SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG-GGAKKMLDAGA--LENVEAIFGLHV 199 (443)
Q Consensus 129 --~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~-~G~~~~~~~g~--~~~~d~~i~~~~ 199 (443)
.++||++||||+ ||++++++.|++.+++.+..++++|+|+|++||| ++ .|++.+++... ...+|++++.++
T Consensus 81 ~~~~~dg~~yGrG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~~~G~~~~~~~~~~~~~~~d~~i~~ep 160 (370)
T TIGR01246 81 EPVERDGKLYGRGAADMKGSLAAFIVAAERFVKKNPDHKGSISLLITSDEEGTAIDGTKKVVETLMARDELIDYCIVGEP 160 (370)
T ss_pred CcEEECCEEEecccccchHHHHHHHHHHHHHHHhcCCCCCcEEEEEEeccccCCCcCHHHHHHHHHhcCCCCCEEEEcCC
Confidence 357899999997 7999999999999988877789999999999999 43 69998875321 124788887665
Q ss_pred CCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHHhhccc-cCCCCCceEEEEEEEcCC
Q 013442 200 SSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSRE-ADPLDSQVLTVAKFEGGG 278 (443)
Q Consensus 200 ~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~~~~~~-~~~~~~~t~~v~~i~gG~ 278 (443)
....+.+.. ...+++|..+++++++|+++|++.|+.|.||+..+++++..|+....+. .....+.+++++.|+||.
T Consensus 161 ~~~~~~~~~---i~~~~~G~~~~~v~v~G~~~H~~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~t~~i~~i~~g~ 237 (370)
T TIGR01246 161 SSVKKLGDV---IKNGRRGSITGNLTIKGIQGHVAYPHLANNPIHKAAPALAELTAIKWDEGNEFFPPTSLQITNIHAGT 237 (370)
T ss_pred CCcccCCce---EEEeeeEEEEEEEEEEccCcccCCcccCCCHHHHHHHHHHHHhhhhhccCCccCCCCceEeeeeecCC
Confidence 432222221 1234579999999999999999999999999999999999998764222 122346799999999996
Q ss_pred -cCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCc-ccCCHHHHHHHHHHHHHhcCC
Q 013442 279 -AFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPV-TVNNKNLHEHFQKVAADMLGV 356 (443)
Q Consensus 279 -~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~d~~~~~~~~~~~~~~~g~ 356 (443)
..|+||+.|++.+|+|++|.++.+++.++|++.+++ .++.+++++ ....+| ..+|+++++.+.+++++.+|.
T Consensus 238 ~~~nvvP~~~~~~~diR~~~~~~~~~v~~~i~~~~~~----~~~~~~v~~--~~~~~p~~~~~~~~~~~~~~a~~~~~g~ 311 (370)
T TIGR01246 238 GANNVIPGELYVQFNLRFSTEVSDEILKQRVEAILDQ----HGLDYDLEW--SLSGEPFLTNDGKLIDKAREAIEETNGI 311 (370)
T ss_pred CCCcccCCceEEEEEEecCCCCCHHHHHHHHHHHHHH----cCCCEEEEE--ecCCcceeCCCCHHHHHHHHHHHHHhCC
Confidence 689999999999999999999999999999998764 356666665 222333 234788999999999988787
Q ss_pred cccccCCCCCCCchHHHHHhh-cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 013442 357 QNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRY 424 (443)
Q Consensus 357 ~~~~~~~~~~g~tDa~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l 424 (443)
++. ...++|++|++++... +|++. || ||. ..+|++||+++++++.+++++|+.++.+|
T Consensus 312 ~~~--~~~~~g~~d~~~~~~~g~p~~~--~G-----p~~-~~~H~~~E~i~i~~l~~~~~~~~~~l~~~ 370 (370)
T TIGR01246 312 KPE--LSTGGGTSDGRFIALMGAEVVE--FG-----PVN-ATIHKVNECVSIEDLEKLSDVYQDLLENL 370 (370)
T ss_pred CCc--eecCCCCchHHHHHHcCCCEEE--ec-----CCc-ccCCCCCceeEHHHHHHHHHHHHHHHHhC
Confidence 663 3467888999999877 88654 56 333 35999999999999999999999998764
No 18
>PRK05111 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=6.6e-51 Score=407.96 Aligned_cols=348 Identities=18% Similarity=0.245 Sum_probs=280.4
Q ss_pred HHHHHHHHHHHhCCCCCccc-------HHHHHHHHHHHHhCCCCeeec-----ccCceEEEEECCCCCcEEEEEEecccc
Q 013442 50 YWMVNIRRKIHENPELGFQE-------FETSKLIRAELDQMGIPYKFP-----VAVTGVVGYIGTGQPPFVALRADMDAL 117 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~~E-------~~~~~~l~~~l~~~G~~~~~~-----~~~~~via~~~~~~~~~I~~~~H~DtV 117 (443)
+++++++++|++|||+|++| .++++||.++|+++|++++.. .+++|++++++++ .++|+|+||+|||
T Consensus 5 ~~~i~~l~~lv~i~s~s~~e~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~nvia~~g~~-~~~il~~~H~Dvv 83 (383)
T PRK05111 5 PSFIEMYRALIATPSISATDPALDQSNRAVIDLLAGWFEDLGFNVEIQPVPGTRGKFNLLASLGSG-EGGLLLAGHTDTV 83 (383)
T ss_pred hHHHHHHHHHhCcCCcCCCCcccccchHHHHHHHHHHHHHCCCeEEEEecCCCCCCceEEEEeCCC-CCeEEEEeeecee
Confidence 67999999999999999876 569999999999999998652 1467999999543 3689999999999
Q ss_pred cCcccCCCc---cc-cCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchHHHHHHcCCCC
Q 013442 118 AMEESVEWE---HK-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALE 189 (443)
Q Consensus 118 p~~~~~~w~---~~-~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~~~~~g~~~ 189 (443)
|+++ .+|+ |. .++||++||||+ ||+++++|+|+++|++. .++++|.|+|++||| ++.|++++++++.+.
T Consensus 84 p~~~-~~W~~~Pf~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~~~--~~~~~i~~~~~~~EE~g~~G~~~~~~~~~~~ 160 (383)
T PRK05111 84 PFDE-GRWTRDPFTLTEHDGKLYGLGTADMKGFFAFILEALRDIDLT--KLKKPLYILATADEETSMAGARAFAEATAIR 160 (383)
T ss_pred cCCC-CcCcCCCCccEEECCEEEecccccccHHHHHHHHHHHHHhhc--CCCCCeEEEEEeccccCcccHHHHHhcCCCC
Confidence 9865 5685 43 567899999997 89999999999999874 477899999999999 678999999887643
Q ss_pred ccceeeEecCCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHHhhcc----ccCC--
Q 013442 190 NVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSR----EADP-- 263 (443)
Q Consensus 190 ~~d~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~~~~~----~~~~-- 263 (443)
.|++++. +|++.. +..+++|..+++|+++|+++|+|.|+.|.||+..+++++.+++.+... ...+
T Consensus 161 -~d~~i~~-----ep~~~~---~~~~~~G~~~~~i~v~G~~~H~~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~ 231 (383)
T PRK05111 161 -PDCAIIG-----EPTSLK---PVRAHKGHMSEAIRITGQSGHSSDPALGVNAIELMHDVIGELLQLRDELQERYHNPAF 231 (383)
T ss_pred -CCEEEEc-----CCCCCc---eeecccceEEEEEEEEeechhccCCccCcCHHHHHHHHHHHHHHHHHHHhccCCCccC
Confidence 4666653 344321 123567999999999999999999999999999999999999876421 1111
Q ss_pred -CCCceEEEEEEEcCCcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcc--cCCH
Q 013442 264 -LDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVT--VNNK 340 (443)
Q Consensus 264 -~~~~t~~v~~i~gG~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~d~ 340 (443)
...+++|++.|+||...|+||++|++.+|+|++|.++.+++.++|++.+++.+..+++.++++.. ...+|++ +.++
T Consensus 232 ~~~~~t~~i~~i~gg~~~NvVP~~~~~~~diR~~p~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 310 (383)
T PRK05111 232 TVPYPTLNLGHIHGGDAPNRICGCCELHFDIRPLPGMTLEDLRGLLREALAPVSERWPGRITVAPL-HPPIPGYECPADH 310 (383)
T ss_pred CCCCCceeEeeeecCCcCcccCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhhCCCeEEEecc-ccCCCCcCCCCCC
Confidence 23579999999999999999999999999999999999999999999999887777777776531 2234443 4456
Q ss_pred HHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhh-cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHH
Q 013442 341 NLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHAS 419 (443)
Q Consensus 341 ~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~ 419 (443)
++++.+++++ |.++ ...++++|+.++.+. +|+++ +| ||....+|+|||+++++++.+++++|+.
T Consensus 311 ~l~~~~~~~~----g~~~----~~~~~~~Da~~~~~~g~p~v~--~G-----~g~~~~~H~~~E~v~~~~l~~~~~i~~~ 375 (383)
T PRK05111 311 QLVRVVEKLL----GHKA----EVVNYCTEAPFIQQLGCPTLV--LG-----PGSIEQAHQPDEYLELSFIKPTRELLRQ 375 (383)
T ss_pred HHHHHHHHHh----CCCC----ceeeeeccHHHHHhcCCCEEE--EC-----CCchHhCcCCCCcccHHHHHHHHHHHHH
Confidence 7777765543 5543 224567999988776 88775 45 4444579999999999999999999999
Q ss_pred HHHHHHh
Q 013442 420 LATRYLL 426 (443)
Q Consensus 420 ~~~~l~~ 426 (443)
++.+++.
T Consensus 376 ~~~~~~~ 382 (383)
T PRK05111 376 LIHHFCL 382 (383)
T ss_pred HHHHHhc
Confidence 9999874
No 19
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase. This group of sequences contains annotations for both acetylornithine deacetylase and succinyl-diaminopimelate desuccinylase, but does not contain any members with experimental characterization. Bacillus, Staphylococcus and Sulfolobus species contain multiple hits to this subfamily and each may have a separate activity. Determining which is which must await further laboratory research.
Probab=100.00 E-value=8.1e-52 Score=413.26 Aligned_cols=347 Identities=19% Similarity=0.221 Sum_probs=282.0
Q ss_pred HHHHHHHhCCC---CCcccHHHHHHHHHHHHhCCCCeeec---ccCce----EEEEECCC-CCcEEEEEEecccccCccc
Q 013442 54 NIRRKIHENPE---LGFQEFETSKLIRAELDQMGIPYKFP---VAVTG----VVGYIGTG-QPPFVALRADMDALAMEES 122 (443)
Q Consensus 54 ~ll~~l~~ipS---~s~~E~~~~~~l~~~l~~~G~~~~~~---~~~~~----via~~~~~-~~~~I~~~~H~DtVp~~~~ 122 (443)
+++++|++||| .+++|.++++||.++|+++|++++.. ....+ +++.+.+. ++|+|+|+|||||||+++.
T Consensus 2 ~~l~~lv~i~s~~~~~~~e~~~a~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ill~~H~DtVp~~~~ 81 (375)
T TIGR01910 2 ELLKDLISIPSVNPPGGNEETIANYIKDLLREFGFSTDVIEITDDRLKVLGKVVVKEPGNGNEKSLIFNGHYDVVPAGDL 81 (375)
T ss_pred hhHHhhhcCCCCCCCCcCHHHHHHHHHHHHHHCCCceEEEecCchhcccccceEEeccCCCCCCEEEEecccccccCCCh
Confidence 57999999999 77899999999999999999998752 12233 45555443 3589999999999999988
Q ss_pred CCCccc----cCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchHHHHHHcCCCCcccee
Q 013442 123 VEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAI 194 (443)
Q Consensus 123 ~~w~~~----~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~~~~~g~~~~~d~~ 194 (443)
++|+++ .+++|++||||+ |++++++|+|+++|++.+..++++|.|+|+++|| ++.|++++++++.+.++|++
T Consensus 82 ~~w~~~Pf~~~~~~g~i~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~G~~~~~~~~~~~~~d~~ 161 (375)
T TIGR01910 82 ELWKTDPFKPVEKDGKLYGRGATDMKGGLVALLYALKAIREAGIKPNGNIILQSVVDEESGEAGTLYLLQRGYFKDADGV 161 (375)
T ss_pred hhCcCCCCCcEEECCEEEecCccccchHHHHHHHHHHHHHHcCCCCCccEEEEEEcCcccCchhHHHHHHcCCCCCCCEE
Confidence 899644 467899999997 8999999999999998887889999999999999 77899999998877667888
Q ss_pred eEecCCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHHhhcccc------CCCCCce
Q 013442 195 FGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREA------DPLDSQV 268 (443)
Q Consensus 195 i~~~~~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~~~~~~~------~~~~~~t 268 (443)
++.++.. .+.+. .+++|..+++|+++|+++|+|.|+.|.||+..+++++.+|+++..... ......+
T Consensus 162 i~~~~~~---~~~v~----~~~~G~~~~~i~~~G~~~Hs~~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~t 234 (375)
T TIGR01910 162 LIPEPSG---GDNIV----IGHKGSIWFKLRVKGKQAHASFPQFGVNAIMKLAKLITELNELEEHIYARNSYGFIPGPIT 234 (375)
T ss_pred EECCCCC---CCceE----EEecceEEEEEEEeeeecccCCCCcchhHHHHHHHHHHHHHHHHHHhhhcccccccCCCcc
Confidence 8644211 12222 345799999999999999999999999999999999999998753211 1234579
Q ss_pred EEEEEEEcCCcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCC-CCcccCCHHHHHHHH
Q 013442 269 LTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSF-YPVTVNNKNLHEHFQ 347 (443)
Q Consensus 269 ~~v~~i~gG~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~d~~~~~~~~ 347 (443)
++++.|+||...|+||++|++.+|+|+.|..+.+++.++|+++++..+...++.++++.....+ ....+.++++++.++
T Consensus 235 ~~i~~i~gG~~~nviP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (375)
T TIGR01910 235 FNPGVIKGGDWVNSVPDYCEFSIDVRIIPEENLDEVKQIIEDVVKALSKSDGWLYENEPVVKWSGPNETPPDSRLVKALE 314 (375)
T ss_pred ccceeEECCCCcCcCCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHHHhhcCcHHhhCCCeeeecCCcCCCCCCHHHHHHH
Confidence 9999999999999999999999999999999999999999999988765556666554311111 223466788999999
Q ss_pred HHHHHhcCCcccccCCCCCCCchHHHHHhh-cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHH
Q 013442 348 KVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAAL 416 (443)
Q Consensus 348 ~~~~~~~g~~~~~~~~~~~g~tDa~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~ 416 (443)
+++++.+|.++. ...++|++|+++|.+. +|++. +| ||....+|++|||++++++.+++++
T Consensus 315 ~~~~~~~g~~~~--~~~~~g~tD~~~~~~~gip~v~--~G-----pg~~~~~H~~~E~v~~~~~~~~~~~ 375 (375)
T TIGR01910 315 AIIKKVRGIEPE--VLVSTGGTDARFLRKAGIPSIV--YG-----PGDLETAHQVNEYISIKNLVESTKV 375 (375)
T ss_pred HHHHHHhCCCCe--EeeeccchhHHHHHHcCCcEEE--EC-----CCCccccCCCCceeEHHHHHHHhhC
Confidence 999987788663 3457889999999887 99865 56 4444679999999999999998764
No 20
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase. This model represents a family of eukaryotic N-acyl-L-amino-acid amidohydrolases active on fatty acid and acetyl amides of L-amino acids.
Probab=100.00 E-value=1e-50 Score=408.59 Aligned_cols=362 Identities=17% Similarity=0.183 Sum_probs=283.9
Q ss_pred HHHHHHHHHHHhCCCCCcc--cHHHHHHHHHHHHhCCCCeee---cccCceEEEEECCC-C-CcEEEEEEecccccCccc
Q 013442 50 YWMVNIRRKIHENPELGFQ--EFETSKLIRAELDQMGIPYKF---PVAVTGVVGYIGTG-Q-PPFVALRADMDALAMEES 122 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~~--E~~~~~~l~~~l~~~G~~~~~---~~~~~~via~~~~~-~-~~~I~~~~H~DtVp~~~~ 122 (443)
++++++|++|++|||++++ |.++++||.++|+++|++++. ..+++|++++++++ + .|+|+|+|||||||+++
T Consensus 9 ~~~~~~l~~lv~ipS~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~g~~~l~~~~~g~~~~~~~i~l~~H~DvVp~~~- 87 (400)
T TIGR01880 9 DIAVTRFREYLRINTVQPNPDYAACVDFLIKQADELGLARKTIEFVPGKPVVVLTWPGSNPELPSILLNSHTDVVPVFR- 87 (400)
T ss_pred HHHHHHHHHHhccCccCCCccHHHHHHHHHHHHHhCCCceeEEEecCCceeEEEEEecCCCCCCeEEEEcccccCCCCc-
Confidence 7789999999999999864 678999999999999999764 23578999999553 3 38999999999999977
Q ss_pred CCCccc---c--CCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-cc-chHHHHHHcCCCCccc
Q 013442 123 VEWEHK---S--KVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG-GGAKKMLDAGALENVE 192 (443)
Q Consensus 123 ~~w~~~---~--~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~-~G~~~~~~~g~~~~~d 192 (443)
..|+++ . ++||+|||||+ |++++++++|+++|++.+..++++|.|+|++||| ++ .|++++++++.+.+.|
T Consensus 88 ~~W~~~Pf~~~~~~dg~iyGrG~~D~K~~~aa~l~a~~~l~~~~~~~~~~v~l~~~~dEE~g~~~G~~~~~~~~~~~~~~ 167 (400)
T TIGR01880 88 EHWTHPPFSAFKDEDGNIYARGAQDMKCVGVQYLEAVRNLKASGFKFKRTIHISFVPDEEIGGHDGMEKFAKTDEFKALN 167 (400)
T ss_pred ccCccCCccceecCCCeEEEcccccccHHHHHHHHHHHHHHHcCCCCCceEEEEEeCCcccCcHhHHHHHHHhhhccCCc
Confidence 478643 2 35899999998 8999999999999999888889999999999999 55 5999999887666667
Q ss_pred eeeEecCCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHHhhcc------cc-C--C
Q 013442 193 AIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSR------EA-D--P 263 (443)
Q Consensus 193 ~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~~~~~------~~-~--~ 263 (443)
..++.+.....|++.. ..+.+++|..+++|+++|+++||+.|. +.||+..+++++..|+++... .. . .
T Consensus 168 ~~~~~d~g~~~~~~~~--~i~~~~kG~~~~~l~v~G~~~Hs~~~~-~~nai~~l~~~i~~l~~~~~~~~~~~~~~~~~~~ 244 (400)
T TIGR01880 168 LGFALDEGLASPDDVY--RVFYAERVPWWVVVTAPGNPGHGSKLM-ENTAMEKLEKSVESIRRFRESQFQLLQSNPDLAI 244 (400)
T ss_pred eEEEEcCCCccccccc--ceeEEeeEEEEEEEEEecCCCCCCCCC-CCCHHHHHHHHHHHHHHhhHHHHHHHhcCccccc
Confidence 7766543222344422 234567899999999999999999864 479999999999988765311 11 1 1
Q ss_pred CCCceEEEEEEEcCCcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCc--ccCCHH
Q 013442 264 LDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPV--TVNNKN 341 (443)
Q Consensus 264 ~~~~t~~v~~i~gG~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~d~~ 341 (443)
...+|+|++.|+||...|+||++|++.+|+|++|.++.+++.++|++.++... .++++++... ....++ .+.+++
T Consensus 245 ~~~~t~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~~~~~i~~~i~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~ 321 (400)
T TIGR01880 245 GDVTSVNLTKLKGGVQSNVIPSEAEAGFDIRLAPSVDFEEMENRLDEWCADAG--EGVTYEFSQH-SGKPLVTPHDDSNP 321 (400)
T ss_pred cccceeecceeccCCcCCcCCCccEEEEEEeeCCCCCHHHHHHHHHHHHhccC--CceEEEEeec-CCCCCCCCCCCCCH
Confidence 12479999999999999999999999999999999999999999999988632 3444444321 111122 234678
Q ss_pred HHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhh-cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHH
Q 013442 342 LHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASL 420 (443)
Q Consensus 342 ~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~ 420 (443)
+++.+++++++. +.+.. +..+.|+||+.++.+. +|++. ||+.. +....+|++||+++++++.+++++|+++
T Consensus 322 lv~~l~~a~~~~-~~~~~--~~~~~g~tDa~~~~~~gip~v~--fgp~~---~~~~~aH~~dE~i~i~~l~~~~~~~~~~ 393 (400)
T TIGR01880 322 WWVAFKDAVKEM-GCTFK--PEILPGSTDSRYIRAAGVPALG--FSPMN---NTPVLLHDHNEFLNEAVFLRGIEIYQTL 393 (400)
T ss_pred HHHHHHHHHHHc-CCeec--ceeecCcchHHHHHhCCCCeEE--ECCcc---CCcccccCCCCceEHHHHHHHHHHHHHH
Confidence 999999999986 65432 2357889999999887 99754 55321 1123699999999999999999999999
Q ss_pred HHHHHh
Q 013442 421 ATRYLL 426 (443)
Q Consensus 421 ~~~l~~ 426 (443)
+.++..
T Consensus 394 l~~~~~ 399 (400)
T TIGR01880 394 ISALAS 399 (400)
T ss_pred HHHhhc
Confidence 998863
No 21
>PRK06446 hypothetical protein; Provisional
Probab=100.00 E-value=1e-50 Score=412.25 Aligned_cols=361 Identities=16% Similarity=0.197 Sum_probs=283.7
Q ss_pred HHHHHHHHHHHhCCCCCcc-c--HHHHHHHHHHHHhCCCCeeec--ccCceEEEEECCCCCcEEEEEEecccccCcccCC
Q 013442 50 YWMVNIRRKIHENPELGFQ-E--FETSKLIRAELDQMGIPYKFP--VAVTGVVGYIGTGQPPFVALRADMDALAMEESVE 124 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~~-E--~~~~~~l~~~l~~~G~~~~~~--~~~~~via~~~~~~~~~I~~~~H~DtVp~~~~~~ 124 (443)
+++++++++|++|||+|++ | .++++||.++|+++||+++.. .+++|++++++++.+|+|+|+||+||||+++.++
T Consensus 2 ~~~~~~l~eLV~i~S~s~~~~~~~~~a~~l~~~l~~~G~~ve~~~~~~~~~lia~~~~~~~~~vll~gH~DvVp~~~~~~ 81 (436)
T PRK06446 2 DEELYTLIEFLKKPSISATGEGIEETANYLKDTMEKLGIKANIERTKGHPVVYGEINVGAKKTLLIYNHYDVQPVDPLSE 81 (436)
T ss_pred hhHHHHHHHHhCCCCCCCCcHhHHHHHHHHHHHHHHCCCeEEEEecCCCCEEEEEecCCCCCEEEEEecccCCCCCcccc
Confidence 5689999999999999964 3 689999999999999998753 3578999999654458999999999999988778
Q ss_pred Cccc----cCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchHHHHHHcCC-CCccceee
Q 013442 125 WEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGA-LENVEAIF 195 (443)
Q Consensus 125 w~~~----~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~~~~~g~-~~~~d~~i 195 (443)
|+++ .++||+|||||+ ||+++++|+|++.|++.+ .++.+|.|+|++||| |+.|+++++++.. .-++|+++
T Consensus 82 W~~~Pf~~~~~dg~lyGRGa~DmKgglaa~l~A~~~l~~~~-~~~~~i~~~~~~dEE~g~~g~~~~l~~~~~~~~~d~vi 160 (436)
T PRK06446 82 WKRDPFSATIENGRIYARGASDNKGTLMARLFAIKHLIDKH-KLNVNVKFLYEGEEEIGSPNLEDFIEKNKNKLKADSVI 160 (436)
T ss_pred ccCCCCceEEECCEEEEEeccCCcHHHHHHHHHHHHHHHcC-CCCCCEEEEEEcccccCCHhHHHHHHHHHHHhCCCEEE
Confidence 9754 567999999997 899999999999887655 678999999999999 7789998887622 12467877
Q ss_pred EecCCCCCCCceEEeecCcccccceEEEEEEEe--cCCCCCCCCCCCcHHHHHHHHHHHHHHhhccc-------------
Q 013442 196 GLHVSSLFPVGTVASRPGPTLAAGGFFEAVING--KGGHAAIPQHTIDPIVAASNVIVSLQHLVSRE------------- 260 (443)
Q Consensus 196 ~~~~~~~~~~g~~~~~~g~~~~g~~~~~v~v~G--~~aHss~p~~g~NAi~~~~~~i~~l~~~~~~~------------- 260 (443)
+ ++....+.+... ...+++|..|++++++| +++|||.|+.|.||+..+++++.+|.+...+.
T Consensus 161 ~-E~~~~~~~~~~~--i~~~~kG~~~~~l~v~G~~~~~Hss~p~~g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 237 (436)
T PRK06446 161 M-EGAGLDPKGRPQ--IVLGVKGLLYVELVLRTGTKDLHSSNAPIVRNPAWDLVKLLSTLVDGEGRVLIPGFYDDVRELT 237 (436)
T ss_pred E-CCCCccCCCCeE--EEEecCeEEEEEEEEEeCCCCCCCCCCccCCCHHHHHHHHHHhhCCCCCCEEccchhcCCCCCC
Confidence 5 332222333211 12456899999999999 99999999999999999999999997542000
Q ss_pred ---------------------------c--------CCCCCceEEEEEEEcC----CcCccccCcEEEEEEEecCChHHH
Q 013442 261 ---------------------------A--------DPLDSQVLTVAKFEGG----GAFNIIPDSVTIGGTFRAFSKESI 301 (443)
Q Consensus 261 ---------------------------~--------~~~~~~t~~v~~i~gG----~~~n~vP~~a~~~~diR~~~~~~~ 301 (443)
. .....+++|++.|+|| ...|+||++|++++|+|++|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~t~nv~~i~~g~~~~~~~nvvP~~a~~~~d~R~~p~~~~ 317 (436)
T PRK06446 238 EEERELLKKYDIDVEELRKALGFKELKYSDREKIAEALLTEPTCNIDGFYSGYTGKGSKTIVPSRAFAKLDFRLVPNQDP 317 (436)
T ss_pred HHHHHHHHhCCCCHHHHHHHhCCccccCCCcccHHHHHHhCCcEEEeeeeccccCCCCCcEecCceEEEEEEEcCCCCCH
Confidence 0 0112478999999987 467999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcc--cCCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHh-h-
Q 013442 302 IQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVT--VNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAE-A- 377 (443)
Q Consensus 302 ~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~~~~-~- 377 (443)
+++.++|++.+++. +..+++++ ...++|+ +.++++++.+++++++.+|.++... ...+|++|+++|.+ .
T Consensus 318 ~~v~~~l~~~~~~~----~~~~~~~~--~~~~~p~~~~~~~~~v~~l~~a~~~~~g~~~~~~-~~~~g~~d~~~~~~~~g 390 (436)
T PRK06446 318 YKIFELLKKHLQKV----GFNGEIIV--HGFEYPVRTSVNSKVVKAMIESAKRVYGTEPVVI-PNSAGTQPMGLFVYKLG 390 (436)
T ss_pred HHHHHHHHHHHHHc----CCCeEEEE--cCCcceeecCCCCHHHHHHHHHHHHHhCCCCcee-cCCCCcchHHHHHHHhC
Confidence 99999999998763 33455554 2233443 4568899999999999888766322 23456678888865 3
Q ss_pred cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 013442 378 IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYL 425 (443)
Q Consensus 378 ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~ 425 (443)
+|++++++|+.. + ...+|++||||+++++.+++++|..++.++.
T Consensus 391 ip~v~~~~g~g~---~-~~~~H~~dE~i~i~~l~~~~~~~~~~~~~~~ 434 (436)
T PRK06446 391 IRDIVSAIGVGG---Y-YSNAHAPNENIRIDDYYKAIKHTEEFLKLYS 434 (436)
T ss_pred CCcceeecccCC---C-CcCCcCCCCCcCHHHHHHHHHHHHHHHHHhc
Confidence 898765566432 2 2579999999999999999999999998765
No 22
>PRK07522 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=9.2e-51 Score=407.22 Aligned_cols=349 Identities=18% Similarity=0.249 Sum_probs=280.0
Q ss_pred HHHHHHHHHHHhCCCCCccc-HHHHHHHHHHHHhCCCCeeec----ccCceEEEEECCCCCcEEEEEEecccccCcccCC
Q 013442 50 YWMVNIRRKIHENPELGFQE-FETSKLIRAELDQMGIPYKFP----VAVTGVVGYIGTGQPPFVALRADMDALAMEESVE 124 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~~E-~~~~~~l~~~l~~~G~~~~~~----~~~~~via~~~~~~~~~I~~~~H~DtVp~~~~~~ 124 (443)
.++++++++|++|||+|++| .++++||.++|+++|+++++. +.++|++++++++++|+|+|+||+||||+++ .+
T Consensus 4 ~~~~~~l~~lv~i~S~s~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~nv~a~~~~~~~~~ill~~H~Dtv~~~~-~~ 82 (385)
T PRK07522 4 MSSLDILERLVAFDTVSRDSNLALIEWVRDYLAAHGVESELIPDPEGDKANLFATIGPADRGGIVLSGHTDVVPVDG-QA 82 (385)
T ss_pred hhHHHHHHHHhCCCCcCCCccHHHHHHHHHHHHHcCCeEEEEecCCCCcccEEEEeCCCCCCeEEEEeecccccCCC-CC
Confidence 56899999999999999887 599999999999999998652 2468999999765468999999999999976 47
Q ss_pred Cccc----cCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchHHHHHHcCCC--Ccccee
Q 013442 125 WEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGAL--ENVEAI 194 (443)
Q Consensus 125 w~~~----~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~~~~~g~~--~~~d~~ 194 (443)
|+++ .++||++||||+ ||+++++++|+++|++. .++++|.|+|++||| ++.|++++++.... ..+|++
T Consensus 83 W~~~pf~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~~~--~~~~~i~~~~~~dEE~g~~G~~~l~~~~~~~~~~~d~~ 160 (385)
T PRK07522 83 WTSDPFRLTERDGRLYGRGTCDMKGFIAAALAAVPELAAA--PLRRPLHLAFSYDEEVGCLGVPSMIARLPERGVKPAGC 160 (385)
T ss_pred CCCCCCceEEECCEEEeccccccchHHHHHHHHHHHHHhC--CCCCCEEEEEEeccccCCccHHHHHHHhhhcCCCCCEE
Confidence 8643 356899999997 99999999999999876 468899999999999 67899999875321 235776
Q ss_pred eEecCCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHHhhccccC------CC--CC
Q 013442 195 FGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREAD------PL--DS 266 (443)
Q Consensus 195 i~~~~~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~~~~~~~~------~~--~~ 266 (443)
+.. +|++. .+..+++|..+++|+++|+++|+|.|+.|.||+..+++++.+|+++..+... .. ..
T Consensus 161 i~~-----ep~~~---~~~~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~ 232 (385)
T PRK07522 161 IVG-----EPTSM---RPVVGHKGKAAYRCTVRGRAAHSSLAPQGVNAIEYAARLIAHLRDLADRLAAPGPFDALFDPPY 232 (385)
T ss_pred EEc-----cCCCC---eeeeeecceEEEEEEEEeeccccCCCccCcCHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCc
Confidence 643 34432 1223467999999999999999999999999999999999999887533211 11 13
Q ss_pred ceEEEEEEEcCCcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHH------HHHhhCCeEEEEeeccCCCCcccC--
Q 013442 267 QVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMK------QASVQRCNATVTFDDKSFYPVTVN-- 338 (443)
Q Consensus 267 ~t~~v~~i~gG~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~------~~~~~~~~~~v~~~~~~~~~~~~~-- 338 (443)
.+++++.|+||...|+||++|++.+|+|++|..+.+++.++|++.+++ .+...+++++++. ...++++..
T Consensus 233 ~t~~i~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~i~~~i~~~i~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~~~ 310 (385)
T PRK07522 233 STLQTGTIQGGTALNIVPAECEFDFEFRNLPGDDPEAILARIRAYAEAELLPEMRAVHPEAAIEFEP--LSAYPGLDTAE 310 (385)
T ss_pred ceeEEeeeecCccccccCCceEEEEEEccCCCCCHHHHHHHHHHHHHhhcchhhhhhcCCCcEEEEe--ccCCCCCCCCC
Confidence 689999999999999999999999999999999999999999999987 2334566666655 445666644
Q ss_pred CHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhh-cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHH
Q 013442 339 NKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALH 417 (443)
Q Consensus 339 d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~ 417 (443)
++++++.+++++ +... .....+++|+++|... +|++. +| ||....+|++||+++++++.+++++|
T Consensus 311 ~~~~v~~~~~~~----~~~~---~~~~~~~td~~~~~~~gip~v~--~G-----pg~~~~~H~~~E~i~i~~l~~~~~~~ 376 (385)
T PRK07522 311 DAAAARLVRALT----GDND---LRKVAYGTEAGLFQRAGIPTVV--CG-----PGSIEQAHKPDEFVELAQLAACEAFL 376 (385)
T ss_pred CcHHHHHHHHHh----CCCC---cceEeeecchHHhccCCCCEEE--EC-----CCChhhCCCCCccccHHHHHHHHHHH
Confidence 467887776553 4433 1235578999999876 89765 45 55556799999999999999999999
Q ss_pred HHHHHHHH
Q 013442 418 ASLATRYL 425 (443)
Q Consensus 418 a~~~~~l~ 425 (443)
+.++.++.
T Consensus 377 ~~~~~~~~ 384 (385)
T PRK07522 377 RRLLASLA 384 (385)
T ss_pred HHHHHHHh
Confidence 99998764
No 23
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=1.4e-50 Score=407.16 Aligned_cols=351 Identities=21% Similarity=0.313 Sum_probs=287.8
Q ss_pred HHHHHHHHHHHhCCCCC---cccHHHHHHHHHHHHhCCCCeeecc---c--------CceEEEEECCCCCcEEEEEEecc
Q 013442 50 YWMVNIRRKIHENPELG---FQEFETSKLIRAELDQMGIPYKFPV---A--------VTGVVGYIGTGQPPFVALRADMD 115 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s---~~E~~~~~~l~~~l~~~G~~~~~~~---~--------~~~via~~~~~~~~~I~~~~H~D 115 (443)
+++++++++|++|||+| .+|.++++||+++|+++||++++.. . ++|+++..++++ |+|+|+||+|
T Consensus 6 ~~~~~~l~~lv~i~S~s~~~~~~~~~a~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ill~~HlD 84 (394)
T PRK08651 6 FDIVEFLKDLIKIPTVNPPGENYEEIAEFLRDTLEELGFSTEIIEVPNEYVKKHDGPRPNLIARRGSGN-PHLHFNGHYD 84 (394)
T ss_pred HHHHHHHHHHhcCCccCCCCcCHHHHHHHHHHHHHHcCCeEEEEecCccccccccCCcceEEEEeCCCC-ceEEEEeeee
Confidence 88999999999999998 5678999999999999999987631 1 245777765444 8999999999
Q ss_pred cccCcccCCCc---cc-cCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchHHHHHHcCC
Q 013442 116 ALAMEESVEWE---HK-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGA 187 (443)
Q Consensus 116 tVp~~~~~~w~---~~-~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~~~~~g~ 187 (443)
|||+++.. |+ |. .+++|++||||+ |++++++|+|++.|++.+ +++|.|+|++||| ++.|++++++++.
T Consensus 85 tvp~~~~~-~~~~Pf~~~~~~~~~~grG~~D~k~~~~~~l~a~~~l~~~~---~~~v~~~~~~~EE~g~~G~~~~~~~~~ 160 (394)
T PRK08651 85 VVPPGEGW-SVNVPFEPKVKDGKVYGRGASDMKGGIAALLAAFERLDPAG---DGNIELAIVPDEETGGTGTGYLVEEGK 160 (394)
T ss_pred eecCCCCc-cccCCCCcEEECCEEEecCccccchHHHHHHHHHHHHHhcC---CCCEEEEEecCccccchhHHHHHhccC
Confidence 99998632 44 44 357899999998 899999999999998765 7999999999999 6689999998876
Q ss_pred CCccceeeEecCCCCCCCc--eEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHHhhcccc----
Q 013442 188 LENVEAIFGLHVSSLFPVG--TVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREA---- 261 (443)
Q Consensus 188 ~~~~d~~i~~~~~~~~~~g--~~~~~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~~~~~~~---- 261 (443)
++ +|.+++.+ |.+ .+. .+++|..+++|+++|+++|++.|+.|.||+..+++++.+|++...+..
T Consensus 161 ~~-~d~~i~~~-----~~~~~~i~----~~~~G~~~~~i~v~G~~~H~~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~ 230 (394)
T PRK08651 161 VT-PDYVIVGE-----PSGLDNIC----IGHRGLVWGVVKVYGKQAHASTPWLGINAFEAAAKIAERLKSSLSTIKSKYE 230 (394)
T ss_pred CC-CCEEEEec-----CCCCCceE----EecccEEEEEEEEEEeccccCCCccccCHHHHHHHHHHHHHHHHHhhhcccc
Confidence 43 57766543 222 232 245799999999999999999999999999999999999986542211
Q ss_pred --C-CCCCceEEEEE--EEcCCcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcc
Q 013442 262 --D-PLDSQVLTVAK--FEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVT 336 (443)
Q Consensus 262 --~-~~~~~t~~v~~--i~gG~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 336 (443)
. .....+++++. |+||.+.|+||++|++.+|+|+.|..+.+++.++|++.++..+.+.++++++++ ...++++
T Consensus 231 ~~~~~~~~~~~~ig~~~i~gG~~~nviP~~a~~~~diR~~~~~~~e~i~~~i~~~~~~~~~~~~~~~~i~~--~~~~~~~ 308 (394)
T PRK08651 231 YDDERGAKPTVTLGGPTVEGGTKTNIVPGYCAFSIDRRLIPEETAEEVRDELEALLDEVAPELGIEVEFEI--TPFSEAF 308 (394)
T ss_pred ccccccCCCceeecceeeeCCCCCCccCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHHHhhccCCCeeEEE--ecccCCc
Confidence 1 12356788888 999999999999999999999999999999999999999988777787777765 3344554
Q ss_pred c--CCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhh-cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHH
Q 013442 337 V--NNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYG 413 (443)
Q Consensus 337 ~--~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~ 413 (443)
. .++++++.+++++++.+|.++. +..+.|++|+++|... +|++++ | ||....+|++||+++++++.++
T Consensus 309 ~~~~~~~l~~~~~~a~~~~~g~~~~--~~~~~g~tD~~~~~~~gip~v~~--G-----pg~~~~~H~~~E~i~~~~l~~~ 379 (394)
T PRK08651 309 VTDPDSELVKALREAIREVLGVEPK--KTISLGGTDARFFGAKGIPTVVY--G-----PGELELAHAPDEYVEVKDVEKA 379 (394)
T ss_pred cCCCCCHHHHHHHHHHHHHhCCCCc--eeeecCcccHHHHhhCCCcEEEE--C-----CCChHhcCCCCceeEHHHHHHH
Confidence 3 4567999999999997787663 3457789999999987 998654 5 4544579999999999999999
Q ss_pred HHHHHHHHHHHHh
Q 013442 414 AALHASLATRYLL 426 (443)
Q Consensus 414 ~~~~a~~~~~l~~ 426 (443)
+++|.+++.++.+
T Consensus 380 ~~i~~~~i~~l~~ 392 (394)
T PRK08651 380 AKVYEEVLKRLAK 392 (394)
T ss_pred HHHHHHHHHHhhc
Confidence 9999999999864
No 24
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE). This model represents a clade of acetylornithine deacetylases from proteobacteria. This enzyme is the final step of the "acetylated" ornithine biosynthesis pathway. The enzyme is closely related to dapE, succinyl-diaminopimelate desuccinylase, and outside of this clade annotation is very inaccurate as to which function should be ascribed to genes.
Probab=100.00 E-value=1.6e-50 Score=402.44 Aligned_cols=338 Identities=21% Similarity=0.280 Sum_probs=273.2
Q ss_pred HHHHHHHhCCCCCccc-HHHHHHHHHHHHhCCCCeeecc-----cCceEEEEECCCCCcEEEEEEecccccCcccCCCcc
Q 013442 54 NIRRKIHENPELGFQE-FETSKLIRAELDQMGIPYKFPV-----AVTGVVGYIGTGQPPFVALRADMDALAMEESVEWEH 127 (443)
Q Consensus 54 ~ll~~l~~ipS~s~~E-~~~~~~l~~~l~~~G~~~~~~~-----~~~~via~~~~~~~~~I~~~~H~DtVp~~~~~~w~~ 127 (443)
+++++|++|||+|+++ .++++||.++|+++|++++... .++|++++++++.+|+|+|+||+||||+++ ..|++
T Consensus 1 ~~l~~lv~i~S~s~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~nl~~~~~~~~~~~i~l~~H~Dtvp~~~-~~w~~ 79 (364)
T TIGR01892 1 EILTKLVAFDSTSFRPNVDLIDWAQAYLEALGFSVEVQPFPDGAEKSNLVAVIGPSGAGGLALSGHTDVVPYDD-AAWTR 79 (364)
T ss_pred ChHHHhhCcCCcCCccHHHHHHHHHHHHHHcCCeEEEEeCCCCCccccEEEEecCCCCCeEEEEcccccccCCC-CcCCC
Confidence 3689999999999866 7999999999999999987632 368999999654458999999999999987 48863
Q ss_pred ---c-cCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchHHHHHHcCCCCccceeeEecC
Q 013442 128 ---K-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHV 199 (443)
Q Consensus 128 ---~-~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~~~~~g~~~~~d~~i~~~~ 199 (443)
. .+++|+|||||+ ||+++++|+|+++|++. .++++|.|+|++||| ++.|++++++++.+ ..|++++.
T Consensus 80 ~Pf~~~~~~~~i~GrG~~D~Kg~~a~~l~a~~~l~~~--~~~~~v~~~~~~~EE~g~~G~~~~~~~~~~-~~d~~i~~-- 154 (364)
T TIGR01892 80 DPFRLTEKDGRLYGRGTCDMKGFLACALAAAPDLAAE--QLKKPLHLALTADEEVGCTGAPKMIEAGAG-RPRHAIIG-- 154 (364)
T ss_pred CCCcceeeCCEEEecCccccchHHHHHHHHHHHHHhc--CcCCCEEEEEEeccccCCcCHHHHHHhcCC-CCCEEEEC--
Confidence 3 577899999995 99999999999999875 468899999999999 67899999988763 46777653
Q ss_pred CCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHHhhcccc-----CCC--CCceEEEE
Q 013442 200 SSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREA-----DPL--DSQVLTVA 272 (443)
Q Consensus 200 ~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~~~~~~~-----~~~--~~~t~~v~ 272 (443)
+|++.... .+++|..+++|+++|+++|++.|+.|.||+..+++++.+|+++..... ..+ ...++|++
T Consensus 155 ---ep~~~~~~---~~~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 228 (364)
T TIGR01892 155 ---EPTRLIPV---RAHKGYASAEVTVRGRSGHSSYPDSGVNAIFRAGRFLQRLVHLADTLLREDLDEGFTPPYTTLNIG 228 (364)
T ss_pred ---CCCCceeE---EeeceEEEEEEEEEcccccccCCccCcCHHHHHHHHHHHHHHHHHHhccCCCCccCCCCCceEEEe
Confidence 45554322 245799999999999999999999999999999999999987642211 111 24699999
Q ss_pred EEEcCCcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHH-hhCCeEEEEeeccCCCCcc--cCCHHHHHHHHHH
Q 013442 273 KFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQAS-VQRCNATVTFDDKSFYPVT--VNNKNLHEHFQKV 349 (443)
Q Consensus 273 ~i~gG~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~-~~~~~~~v~~~~~~~~~~~--~~d~~~~~~~~~~ 349 (443)
.|+||...|+||++|++.+|+|++|+.+.+++.++|++.++..+. ..+++++++. ...+|++ +.|+++++.++++
T Consensus 229 ~i~gg~~~nviP~~~~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~~~~~~~v~~~~~~ 306 (364)
T TIGR01892 229 VIQGGKAVNIIPGACEFVFEWRPIPGMDPEELLQLLETIAQALVRDEPGFEVQIEV--VSTDPGVNTEPDAELVAFLEEL 306 (364)
T ss_pred eeecCCCCcccCCeEEEEEEeecCCCCCHHHHHHHHHHHHHHHHhhCCCceEEEEE--ccCCCCcCCCCCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999987543 3466677665 3344444 4567788877654
Q ss_pred HHHhcCCcccccCCCCCCCchHHHHHhh-cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHH
Q 013442 350 AADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASL 420 (443)
Q Consensus 350 ~~~~~g~~~~~~~~~~~g~tDa~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~ 420 (443)
+ |.++ ...++++|+++|... +|++. +| ||....+|+||||++++++.+++++|+.+
T Consensus 307 ~----~~~~----~~~~~~tD~~~~~~~gip~v~--~G-----pg~~~~~H~~~E~i~i~~l~~~~~~~~~~ 363 (364)
T TIGR01892 307 S----GNAP----EVVSYGTEAPQFQELGAEAVV--CG-----PGDIRQAHQPDEYVEIEDLVRCRAVLARL 363 (364)
T ss_pred h----CCCC----ceecccccHHHHHhCCCcEEE--EC-----CCChHhCCCCCceeeHHHHHHHHHHHHHh
Confidence 3 5433 235568999999877 99765 45 55556799999999999999999999875
No 25
>PRK08201 hypothetical protein; Provisional
Probab=100.00 E-value=3e-50 Score=411.52 Aligned_cols=372 Identities=14% Similarity=0.120 Sum_probs=286.5
Q ss_pred hHHHHhhcCchhHHHHHHHHHHHHhCCCCCc------ccHHHHHHHHHHHHhCCCC-eee--cccCceEEEEECCC-CCc
Q 013442 37 VKFLDFAKKPEIFYWMVNIRRKIHENPELGF------QEFETSKLIRAELDQMGIP-YKF--PVAVTGVVGYIGTG-QPP 106 (443)
Q Consensus 37 ~~~~~~~~~~~~~~~~i~ll~~l~~ipS~s~------~E~~~~~~l~~~l~~~G~~-~~~--~~~~~~via~~~~~-~~~ 106 (443)
+++.++++++. +++++++++|++|||+|+ +|.++++||+++|+++||+ ++. ..+++|+++++.++ ++|
T Consensus 3 ~~~~~~~~~~~--~~~~~~l~~LV~i~Svs~~~~~~~~~~~~a~~l~~~l~~~G~~~~~~~~~~~~~~l~a~~~~~~~~~ 80 (456)
T PRK08201 3 QQVEAYLRERR--EAHLEELKEFLRIPSISALSEHKEDVRKAAEWLAGALEKAGLEHVEIMETAGHPIVYADWLHAPGKP 80 (456)
T ss_pred hHHHHHHHHHH--HHHHHHHHHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHcCCCeEEEEecCCCCEEEEEecCCCCCC
Confidence 46777888877 999999999999999995 4578999999999999997 443 23567899988543 358
Q ss_pred EEEEEEecccccCcccCCCccc----cCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccch
Q 013442 107 FVALRADMDALAMEESVEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGG 178 (443)
Q Consensus 107 ~I~~~~H~DtVp~~~~~~w~~~----~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G 178 (443)
+|+|+||+||||+++..+|+++ .++||+|||||+ ||+++++++|+++|++.+..++++|.|++++||| |+.|
T Consensus 81 ~lll~gH~DvVp~~~~~~W~~dPf~~~~~~g~lyGRG~~DmKgglaa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g 160 (456)
T PRK08201 81 TVLIYGHYDVQPVDPLNLWETPPFEPTIRDGKLYARGASDDKGQVFMHLKAVEALLKVEGTLPVNVKFCIEGEEEIGSPN 160 (456)
T ss_pred EEEEEeccCCcCCCchhcccCCCCceEeECCEEEEEecccCcHHHHHHHHHHHHHHHhcCCCCCCEEEEEEcccccCCcc
Confidence 9999999999999887789654 577899999997 8999999999999987766788999999999999 7789
Q ss_pred HHHHHHcCC-CCccceeeEecCCCCCCCceEEeecCcccccceEEEEEEEecCC--CCCCCC-CCCcHHHHHHHHHHHHH
Q 013442 179 AKKMLDAGA-LENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGG--HAAIPQ-HTIDPIVAASNVIVSLQ 254 (443)
Q Consensus 179 ~~~~~~~g~-~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~a--Hss~p~-~g~NAi~~~~~~i~~l~ 254 (443)
+.+++++.. .-..|++++.++....+... ..+.+++|..+++|+++|+++ |||.|. .+.||+..+++++.+|+
T Consensus 161 ~~~~l~~~~~~~~~d~~ii~e~~~~~~~~~---~i~~g~kG~~~~~l~v~G~~~~~Hs~~~~~~~~nAi~~~~~~l~~l~ 237 (456)
T PRK08201 161 LDSFVEEEKDKLAADVVLISDTTLLGPGKP---AICYGLRGLAALEIDVRGAKGDLHSGLYGGAVPNALHALVQLLASLH 237 (456)
T ss_pred HHHHHHhhHHhccCCEEEEeCCCcCCCCCE---EEEEecCCeEEEEEEEEeCCCCCccccccCcCCCHHHHHHHHHHhcC
Confidence 998887532 11357777765432222111 123567899999999999998 999655 45799999999999997
Q ss_pred Hhhccc------------------------------------cCC------------CCCceEEEEEEEcCCc----Ccc
Q 013442 255 HLVSRE------------------------------------ADP------------LDSQVLTVAKFEGGGA----FNI 282 (443)
Q Consensus 255 ~~~~~~------------------------------------~~~------------~~~~t~~v~~i~gG~~----~n~ 282 (443)
++..+. ... ...+|+|++.|+||.. .|+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~gg~~~~~~~Nv 317 (456)
T PRK08201 238 DEHGTVAVEGFYDGVRPLTPEEREEFAALGFDEEKLKRELGVDELFGEEGYTALERTWARPTLELNGVYGGFQGEGTKTV 317 (456)
T ss_pred CCCCCEecCCcccCCCCCCHHHHHHHHhCCCCHHHHHhhcCCccccCCcchHHHHHHHhCCcEEEEeeecCCCCCCCceE
Confidence 532110 000 0135899999998753 799
Q ss_pred ccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcc--cCCHHHHHHHHHHHHHhcCCcccc
Q 013442 283 IPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVT--VNNKNLHEHFQKVAADMLGVQNIK 360 (443)
Q Consensus 283 vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~d~~~~~~~~~~~~~~~g~~~~~ 360 (443)
||++|++.+|+|++|+++.+++.++|++.+++.. ..+.+++++. ...++++ +.++++++.+.+++++.+|.++..
T Consensus 318 VP~~a~~~~diR~~p~~~~e~v~~~i~~~l~~~~-~~~~~v~~~~--~~~~~~~~~~~~~~~~~~l~~a~~~~~g~~~~~ 394 (456)
T PRK08201 318 IPAEAHAKITCRLVPDQDPQEILDLIEAHLQAHT-PAGVRVTIRR--FDKGPAFVAPIDHPAIQAAARAYEAVYGTEAAF 394 (456)
T ss_pred ECcceEEEEEEEeCCCCCHHHHHHHHHHHHHHhC-CCCeEEEEEE--CCCcCceecCCCCHHHHHHHHHHHHHhCCCcee
Confidence 9999999999999999999999999999987632 2344455543 2334444 456789999999999988876532
Q ss_pred cCCCCCCCc--hHHHHHhh-cCcEEEEecCCCCCCCC-CCCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 013442 361 ENRPLMGTE--DFSFFAEA-IPGYFYYLGMNDETKGK-FETGHSPYFRVNEDALPYGAALHASLATRYL 425 (443)
Q Consensus 361 ~~~~~~g~t--Da~~~~~~-ip~~~~~~G~~~~~pG~-~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~ 425 (443)
...+|+. |+.++... +|+++++ ||. ...+|++|||++++++.+++++|+.++.++.
T Consensus 395 --~~~gg~~~~~~~~~~~~gip~v~~G-------pG~~~~~~H~~nE~v~i~~l~~~~~~l~~~~~~~~ 454 (456)
T PRK08201 395 --TRMGGSIPVVETFSSQLHIPIVLMG-------FGLPSENFHAPNEHFHLENFDKGLRTLVEYWHQLA 454 (456)
T ss_pred --cCCCCcHHHHHHHHHHhCCCEEEec-------CCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhh
Confidence 2333332 56555445 8987654 442 2569999999999999999999999999874
No 26
>PRK09133 hypothetical protein; Provisional
Probab=100.00 E-value=5.1e-50 Score=411.40 Aligned_cols=358 Identities=18% Similarity=0.177 Sum_probs=283.7
Q ss_pred HHHHHHHHHHHhCCCCC--cccHHHHHHHHHHHHhCCCCee---e---cccCceEEEEECCC-CCcEEEEEEecccccCc
Q 013442 50 YWMVNIRRKIHENPELG--FQEFETSKLIRAELDQMGIPYK---F---PVAVTGVVGYIGTG-QPPFVALRADMDALAME 120 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s--~~E~~~~~~l~~~l~~~G~~~~---~---~~~~~~via~~~~~-~~~~I~~~~H~DtVp~~ 120 (443)
+++++++++|++|||++ ++|.++++||.++|+++||+++ . ...++|+++++++. ++|+|+|+||+||||++
T Consensus 37 ~~~~~~l~~Lv~i~S~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~nli~~~~g~~~~~~lll~~H~DtVp~~ 116 (472)
T PRK09133 37 QAARDLYKELIEINTTASTGSTTPAAEAMAARLKAAGFADADIEVTGPYPRKGNLVARLRGTDPKKPILLLAHMDVVEAK 116 (472)
T ss_pred HHHHHHHHHHhccCCCCCCcchHHHHHHHHHHHHHcCCCceEEEeccCCCCceeEEEEecCCCCCCcEEEEeecccCCCC
Confidence 77999999999999998 6788999999999999999853 2 23568999999654 45899999999999997
Q ss_pred ccCCCccc----cCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-c-cchHHHHHHcCC-CCc
Q 013442 121 ESVEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-G-GGGAKKMLDAGA-LEN 190 (443)
Q Consensus 121 ~~~~w~~~----~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g-~~G~~~~~~~g~-~~~ 190 (443)
+ .+|+++ .++||+|||||+ ||+++++|+|+++|++.+..++++|.|+|++||| + +.|+++++++.. .-+
T Consensus 117 ~-~~W~~dPf~~~~~dg~iyGRGa~D~Kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~g~~G~~~l~~~~~~~~~ 195 (472)
T PRK09133 117 R-EDWTRDPFKLVEENGYFYGRGTSDDKADAAIWVATLIRLKREGFKPKRDIILALTGDEEGTPMNGVAWLAENHRDLID 195 (472)
T ss_pred h-hcCCCCCCcceEeCCEEEecCcccchHHHHHHHHHHHHHHhcCCCCCCCEEEEEECccccCccchHHHHHHHHhhccC
Confidence 6 369754 467899999998 8999999999999999887889999999999999 4 489999987643 114
Q ss_pred cceeeEecCCC------CCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHHhhccc----
Q 013442 191 VEAIFGLHVSS------LFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSRE---- 260 (443)
Q Consensus 191 ~d~~i~~~~~~------~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~~~~~~---- 260 (443)
.|++++ ++.. ++|+.. ....+++|..+++|+++|+++|||.|+ +.||+..+++++.+|+++..+.
T Consensus 196 ~~~~i~-e~~~~~~~~~gept~~---~i~~g~kG~~~~~i~v~G~~~Hss~p~-~~nAi~~l~~~l~~l~~~~~~~~~~~ 270 (472)
T PRK09133 196 AEFALN-EGGGGTLDEDGKPVLL---TVQAGEKTYADFRLEVTNPGGHSSRPT-KDNAIYRLAAALSRLAAYRFPVMLND 270 (472)
T ss_pred eEEEEE-CCCccccCCCCCceEE---EeeeecceeEEEEEEEecCCCCCCCCC-CCChHHHHHHHHHHHhhCCCCCccCC
Confidence 577776 5432 233322 234567899999999999999999997 5899999999999998642100
Q ss_pred --------------------------------------c----CCCCCceEEEEEEEcCCcCccccCcEEEEEEEecCCh
Q 013442 261 --------------------------------------A----DPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSK 298 (443)
Q Consensus 261 --------------------------------------~----~~~~~~t~~v~~i~gG~~~n~vP~~a~~~~diR~~~~ 298 (443)
. ......++|++.|+||...|+||++|++.+|+|++|+
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~gG~~~NvVP~~a~~~lDiR~~p~ 350 (472)
T PRK09133 271 VTRAYFKQSAAIETGPLAAAMRAFAANPADEAAIALLSADPSYNAMLRTTCVATMLEGGHAENALPQRATANVNCRIFPG 350 (472)
T ss_pred ccHHHHHHHHHhCCchHHHHHHHHhcCcchHHHHHHHhcCcchhheeeeeEEeeEEecCCcCccCCCceEEEEEEEeCCc
Confidence 0 0013569999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCeEEEEeecc-CCCCcccCCHHHHHHHHHHHHHhc-CCcccccCCCCCCCchHHHHHh
Q 013442 299 ESIIQLKQRIEEVVMKQASVQRCNATVTFDDK-SFYPVTVNNKNLHEHFQKVAADML-GVQNIKENRPLMGTEDFSFFAE 376 (443)
Q Consensus 299 ~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~-g~~~~~~~~~~~g~tDa~~~~~ 376 (443)
.+.+++.++|++.++. .+ ++++.... ...++.+.+.++++.+++++++.+ |.+. .+..++|+||+.++.+
T Consensus 351 ~~~e~v~~~I~~~i~~----~~--v~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~g~~~--~~~~~~ggtDa~~~~~ 422 (472)
T PRK09133 351 DTIEAVRATLKQVVAD----PA--IKITRIGDPSPSPASPLRPDIMKAVEKLTAAMWPGVPV--IPSMSTGATDGRYLRA 422 (472)
T ss_pred hhHHHHHHHHHHHhcC----CC--EEEEEccCCCCCCCCCCCcHHHHHHHHHHHHHCCCCce--eccccccccchHHHHh
Confidence 9999999999998753 23 44433111 122344566789999999998887 5443 2335788999999987
Q ss_pred h-cCcEEE--EecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 013442 377 A-IPGYFY--YLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLL 426 (443)
Q Consensus 377 ~-ip~~~~--~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~~ 426 (443)
. +|++.+ .+| ||....+|++|||++++++.+++++|+.++.++++
T Consensus 423 ~gip~~~~~~i~g-----p~~~~~aH~~dE~v~i~~l~~~~~~l~~~l~~l~~ 470 (472)
T PRK09133 423 AGIPTYGVSGLFG-----DPDDTFAHGLNERIPVASFYEGRDFLYELVKDLAG 470 (472)
T ss_pred cCCCceeecCccc-----CcccccCCCCCCceeHHHHHHHHHHHHHHHHHhhc
Confidence 6 887522 134 55556899999999999999999999999999874
No 27
>PRK08652 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=1.3e-49 Score=393.41 Aligned_cols=338 Identities=15% Similarity=0.114 Sum_probs=273.4
Q ss_pred HHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeeccc--CceEEEEECCCCCcEEEEEEecccccCcccCCCcc
Q 013442 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVA--VTGVVGYIGTGQPPFVALRADMDALAMEESVEWEH 127 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~~~--~~~via~~~~~~~~~I~~~~H~DtVp~~~~~~w~~ 127 (443)
+++++++++|++|||+|++|.++++||.++|+++||+++.... ..|+++ +++|+|+|+||+||||.+..
T Consensus 2 ~~~~~~~~~lv~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~----~~~~~i~l~~H~D~vp~~~~----- 72 (347)
T PRK08652 2 ERAKELLKQLVKIPSPSGQEDEIALHIMEFLESLGYDVHIESDGEVINIVV----NSKAELFVEVHYDTVPVRAE----- 72 (347)
T ss_pred hhHHHHHHHHhcCCCCCCchHHHHHHHHHHHHHcCCEEEEEecCceeEEEc----CCCCEEEEEccccccCCCCC-----
Confidence 5689999999999999999999999999999999999876322 356665 23589999999999997542
Q ss_pred ccCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchHHHHHHcCCCCccceeeEecCCCCC
Q 013442 128 KSKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLF 203 (443)
Q Consensus 128 ~~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~~~~~g~~~~~d~~i~~~~~~~~ 203 (443)
+..+||++||||+ |++++++++|+++|++. ..+++|.|+|++||| ++.|+++++++. ..|++++.++..
T Consensus 73 ~~~~~g~iyGrG~~D~Kg~~a~~l~a~~~l~~~--~~~~~v~~~~~~dEE~g~~G~~~~~~~~---~~d~~i~~ep~~-- 145 (347)
T PRK08652 73 FFVDGVYVYGTGACDAKGGVAAILLALEELGKE--FEDLNVGIAFVSDEEEGGRGSALFAERY---RPKMAIVLEPTD-- 145 (347)
T ss_pred CEEECCEEEeccchhhhHHHHHHHHHHHHHhhc--ccCCCEEEEEecCcccCChhHHHHHHhc---CCCEEEEecCCC--
Confidence 1246899999997 89999999999999854 346799999999999 778999998753 247777655321
Q ss_pred CCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEcCCcCccc
Q 013442 204 PVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNII 283 (443)
Q Consensus 204 ~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gG~~~n~v 283 (443)
+.+ ..+++|..+++|+++|+++|++.|+.|.||+..+++++.+|+++......... .+++++.++||...|+|
T Consensus 146 --~~i----~~~~~g~~~~~i~~~G~~~H~s~p~~g~nAi~~~a~~i~~l~~~~~~~~~~~~-~~~~~~~i~gg~~~nvi 218 (347)
T PRK08652 146 --LKV----AIAHYGNLEAYVEVKGKPSHGACPESGVNAIEKAFEMLEKLKELLKALGKYFD-PHIGIQEIIGGSPEYSI 218 (347)
T ss_pred --Cce----eeecccEEEEEEEEEeeecccCCCCcCcCHHHHHHHHHHHHHHHHHhhhcccC-CCCcceeeecCCCCCcc
Confidence 222 24568999999999999999999999999999999999999887533221111 35778889999999999
Q ss_pred cCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcccCCHHHHHHHHHHHHHhcCCcccccCC
Q 013442 284 PDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENR 363 (443)
Q Consensus 284 P~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~ 363 (443)
|++|++.+|+|++|..+.+++.++|++.+++ .++++++.. ..+..+...|+++++.++++++++ |.++. +.
T Consensus 219 P~~~~~~~diR~~~~~~~~~v~~~i~~~~~~----~~v~~~~~~--~~~~~~~~~~~~lv~~l~~a~~~~-g~~~~--~~ 289 (347)
T PRK08652 219 PALCRLRLDARIPPEVEVEDVLDEIDPILDE----YTVKYEYTE--IWDGFELDEDEEIVQLLEKAMKEV-GLEPE--FT 289 (347)
T ss_pred CCcEEEEEEEEcCCCCCHHHHHHHHHHHHHh----cCceEEEec--cCCcccCCCCCHHHHHHHHHHHHh-CCCCC--cC
Confidence 9999999999999999999999999998863 344444432 212223456789999999999998 87663 34
Q ss_pred CCCCCchHHHHHhh-cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 013442 364 PLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLL 426 (443)
Q Consensus 364 ~~~g~tDa~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~~ 426 (443)
..+|+||+++|.+. +|++. || ||+...+|++|||++++++.+++++|.+++..++.
T Consensus 290 ~~~g~tDa~~~~~~gip~v~--~G-----pg~~~~~H~~nE~i~i~~l~~~~~~l~~~~~~~~~ 346 (347)
T PRK08652 290 VMRSWTDAINFRYNGTKTVV--WG-----PGELDLCHTKFERIDVREVEKAKEFLKALNEILLE 346 (347)
T ss_pred cCCccchhHHHHHCCCCEEE--EC-----CCchhhcCCCCceeeHHHHHHHHHHHHHHHHHHhc
Confidence 56788999999887 99764 56 55556799999999999999999999999998874
No 28
>PRK00466 acetyl-lysine deacetylase; Validated
Probab=100.00 E-value=2.2e-49 Score=391.24 Aligned_cols=330 Identities=12% Similarity=0.093 Sum_probs=267.6
Q ss_pred HHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeecccCceEEEEECCCCCcEEEEEEecccccCcccCCCcccc
Q 013442 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWEHKS 129 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~~~~~I~~~~H~DtVp~~~~~~w~~~~ 129 (443)
+++++++++|++|||+|++|.++++||.++|+++|+++++.. ..|.+. .+ .|+|+|+||+||||. |....
T Consensus 10 ~~~~~~l~~lv~i~s~s~~e~~~~~~l~~~l~~~g~~~~~~~-~~~~~~--~g--~~~lll~gH~DtVp~-----~~~~~ 79 (346)
T PRK00466 10 QKAKELLLDLLSIYTPSGNETNATKFFEKISNELNLKLEILP-DSNSFI--LG--EGDILLASHVDTVPG-----YIEPK 79 (346)
T ss_pred HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCeEEEec-CCCcEe--cC--CCeEEEEeccccCCC-----CCCce
Confidence 678999999999999999999999999999999999988743 235443 22 378999999999994 32335
Q ss_pred CCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchHHHHHHcCCCCccceeeEecCCCCCCC
Q 013442 130 KVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLFPV 205 (443)
Q Consensus 130 ~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~~~~~g~~~~~d~~i~~~~~~~~~~ 205 (443)
++||+|||||+ ||+++++++|+++|++.+ .++.|+|++||| ++.|++++++++. ++|++++.+ |+
T Consensus 80 ~~~g~iyGrG~~DmKgg~aa~l~a~~~l~~~~----~~i~~~~~~dEE~g~~G~~~l~~~~~--~~d~~i~~e-----p~ 148 (346)
T PRK00466 80 IEGEVIYGRGAVDAKGPLISMIIAAWLLNEKG----IKVMVSGLADEESTSIGAKELVSKGF--NFKHIIVGE-----PS 148 (346)
T ss_pred eeCCEEEecCccccchHHHHHHHHHHHHHHcC----CCEEEEEEcCcccCCccHHHHHhcCC--CCCEEEEcC-----CC
Confidence 67899999997 899999999999998865 358999999999 6689999998764 467777643 44
Q ss_pred ceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEcCCcCccccC
Q 013442 206 GTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPD 285 (443)
Q Consensus 206 g~~~~~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gG~~~n~vP~ 285 (443)
+... ...+++|..+++|+++|+++|+|.|+ .||+..+++++.+|.++. ......++|++.|+||...|+||+
T Consensus 149 ~~~~--i~~~~kG~~~~~i~v~G~~~Has~p~--~nAi~~~~~~l~~l~~~~----~~~~~~t~~~~~i~gG~~~NvvP~ 220 (346)
T PRK00466 149 NGTD--IVVEYRGSIQLDIMCEGTPEHSSSAK--SNLIVDISKKIIEVYKQP----ENYDKPSIVPTIIRAGESYNVTPA 220 (346)
T ss_pred CCCc--eEEEeeEEEEEEEEEEeeccccCCCC--cCHHHHHHHHHHHHHhcc----ccCCCCcceeeEEecCCcCcccCC
Confidence 3211 12346899999999999999999886 599999999999987642 223346899999999999999999
Q ss_pred cEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcc--cCCHHHHHHHHHHHHHhcCCcccccCC
Q 013442 286 SVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVT--VNNKNLHEHFQKVAADMLGVQNIKENR 363 (443)
Q Consensus 286 ~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~d~~~~~~~~~~~~~~~g~~~~~~~~ 363 (443)
+|++++|+|++|+.+.+++.++|++.+.. +++++. ..++++ +.++++++.+.+++++. |.++. ..
T Consensus 221 ~a~~~~diR~~p~~~~~~v~~~i~~~~~~------~~~~~~----~~~~~~~~~~~~~lv~~l~~a~~~~-g~~~~--~~ 287 (346)
T PRK00466 221 KLYLHFDVRYAINNKRDDLISEIKDKFQE------CGLKIV----DETPPVKVSINNPVVKALMRALLKQ-NIKPR--LV 287 (346)
T ss_pred ceEEEEEEEeCCCCCHHHHHHHHHHHHhh------CcEeec----cCCCCcccCCCCHHHHHHHHHHHHh-CCCce--EE
Confidence 99999999999999999999999988764 233332 233333 45689999999999986 87653 34
Q ss_pred CCCCCchHHHHHhhcCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhh
Q 013442 364 PLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLLE 427 (443)
Q Consensus 364 ~~~g~tDa~~~~~~ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~~~ 427 (443)
.++|++|+++|.+..|.++ .|| ||....+|++|||++++++.+++++|+.++.+++++
T Consensus 288 ~~~g~tD~~~~~~~~~~~v-~fG-----pg~~~~aH~~nE~i~i~~l~~~~~~~~~~i~~l~~~ 345 (346)
T PRK00466 288 RKAGTSDMNILQKITTSIA-TYG-----PGNSMLEHTNQEKITLDEIYIAVKTYMLAIEELWQK 345 (346)
T ss_pred ecCCcCcHHHHHHhCCCEE-EEC-----CCCcccccCCCceeeHHHHHHHHHHHHHHHHHHHhc
Confidence 5688999999988744343 467 666678999999999999999999999999999864
No 29
>PRK08262 hypothetical protein; Provisional
Probab=100.00 E-value=1.4e-49 Score=409.55 Aligned_cols=370 Identities=14% Similarity=0.137 Sum_probs=282.2
Q ss_pred cCchhHHHHHHHHHHHHhCCCCCcccH---------HHHHHHHHHHHhCCCCeeec-ccCceEEEEECCC-CC-cEEEEE
Q 013442 44 KKPEIFYWMVNIRRKIHENPELGFQEF---------ETSKLIRAELDQMGIPYKFP-VAVTGVVGYIGTG-QP-PFVALR 111 (443)
Q Consensus 44 ~~~~~~~~~i~ll~~l~~ipS~s~~E~---------~~~~~l~~~l~~~G~~~~~~-~~~~~via~~~~~-~~-~~I~~~ 111 (443)
..++ +++++++++|++|||+|++|. ++++||.++|+++|++++.. .++.|+++.+.+. ++ |+|+|+
T Consensus 40 ~~~~--~~~v~~L~~lv~i~S~s~~~~~~~~~~~~~~~~~~L~~~~~~~g~~~~~~~~~~~~vv~~~~g~~~~~~~ill~ 117 (486)
T PRK08262 40 AVDE--DAAAERLSEAIRFRTISNRDRAEDDAAAFDALHAHLEESYPAVHAALEREVVGGHSLLYTWKGSDPSLKPIVLM 117 (486)
T ss_pred cCCH--HHHHHHHHHhcccceeccCCCCcccHHHHHHHHHHHHHhChhhhceeEEEEECCccEEEEEECCCCCCCeEEEE
Confidence 3445 889999999999999998763 48999999999999976652 2335788887443 34 899999
Q ss_pred EecccccCccc--CCCcc---c-cCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchHHH
Q 013442 112 ADMDALAMEES--VEWEH---K-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKK 181 (443)
Q Consensus 112 ~H~DtVp~~~~--~~w~~---~-~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~ 181 (443)
||+||||+++. ..|++ . .++||+|||||+ ||+++++|.|+++|++.+..++++|.|+|++||| ++.|+++
T Consensus 118 gH~DvVp~~~~~~~~W~~~Pf~~~~~dg~lyGRG~~D~Kg~~aa~L~A~~~l~~~~~~l~~~I~llf~~dEE~g~~G~~~ 197 (486)
T PRK08262 118 AHQDVVPVAPGTEGDWTHPPFSGVIADGYVWGRGALDDKGSLVAILEAAEALLAQGFQPRRTIYLAFGHDEEVGGLGARA 197 (486)
T ss_pred CcccccCCCCCCcccCccCCCceEeeCCEEEecCccccchhHHHHHHHHHHHHHcCCCCCCeEEEEEecccccCCcCHHH
Confidence 99999999763 56954 3 567899999996 8999999999999999887899999999999999 7789988
Q ss_pred HHHcCCC--Cccceee------EecC--CCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHH
Q 013442 182 MLDAGAL--ENVEAIF------GLHV--SSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIV 251 (443)
Q Consensus 182 ~~~~g~~--~~~d~~i------~~~~--~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~ 251 (443)
+++.... ...|+++ ..+. ..+.|++.+ +.+++|..+++|+++|+++|||.|+. .||+..+++++.
T Consensus 198 l~~~l~~~~~~~~~~~~~~~~i~~~~~~~~~~p~~~i----~~~~kG~~~~~i~v~G~~~Hss~p~~-~nai~~l~~~l~ 272 (486)
T PRK08262 198 IAELLKERGVRLAFVLDEGGAITEGVLPGVKKPVALI----GVAEKGYATLELTARATGGHSSMPPR-QTAIGRLARALT 272 (486)
T ss_pred HHHHHHHhcCCEEEEEeCCceecccccCCCCceEEee----EEeeeeeEEEEEEEecCCCCCCCCCC-CCHHHHHHHHHH
Confidence 8763110 1233332 2111 113344433 34568999999999999999999999 999999999999
Q ss_pred HHHHhhccc--------------------------------------------cCCCCCceEEEEEEEcCCcCccccCcE
Q 013442 252 SLQHLVSRE--------------------------------------------ADPLDSQVLTVAKFEGGGAFNIIPDSV 287 (443)
Q Consensus 252 ~l~~~~~~~--------------------------------------------~~~~~~~t~~v~~i~gG~~~n~vP~~a 287 (443)
+|++...+. ......+|+|++.|+||...|+||++|
T Consensus 273 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~I~gG~~~NvIP~~a 352 (486)
T PRK08262 273 RLEDNPLPMRLRGPVAEMFDTLAPEMSFAQRVVLANLWLFEPLLLRVLAKSPETAAMLRTTTAPTMLKGSPKDNVLPQRA 352 (486)
T ss_pred HHhhCCCCCccChHHHHHHHHHHHhcCHHHHHHhhcccchhhHHHHHHhcCCccceeEEeeeeeeEEecCCccccCCCcc
Confidence 998641000 001235689999999999999999999
Q ss_pred EEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcccCCHHHHHHHHHHHHHhcCCcccccCCCCCC
Q 013442 288 TIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMG 367 (443)
Q Consensus 288 ~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g 367 (443)
++.+|+|++|+++.+++.++|++.+++. ++++++......+.++.++++++++.+++++++.+|.... .+..+.|
T Consensus 353 ~~~~diR~~p~~~~~~i~~~i~~~~~~~----~~~v~~~~~~~~~~~~~~~~~~lv~~l~~a~~~~~g~~~~-~~~~~~g 427 (486)
T PRK08262 353 TATVNFRILPGDSVESVLAHVRRAVADD----RVEIEVLGGNSEPSPVSSTDSAAYKLLAATIREVFPDVVV-APYLVVG 427 (486)
T ss_pred EEEEEEEeCCCCCHHHHHHHHHHHhccC----ceEEEEecCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCcc-ccceecc
Confidence 9999999999999999999999988642 4444443210122333456788999999999998764222 2234678
Q ss_pred CchHHHHHhhcCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 013442 368 TEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLL 426 (443)
Q Consensus 368 ~tDa~~~~~~ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~~ 426 (443)
++|+++|....|.++. +++..-.||+...+|++||+++++++.+++++|..++.++++
T Consensus 428 ~tDa~~~~~~~p~~~~-~~~~~~gpg~~~~~Ht~dE~i~i~~l~~~~~i~~~~l~~~~~ 485 (486)
T PRK08262 428 ATDSRHYSGISDNVYR-FSPLRLSPEDLARFHGTNERISVANYARMIRFYYRLIENAAG 485 (486)
T ss_pred cccHHHHHHhcCCeEE-ECCccCCcccccCCCCCCCceeHHHHHHHHHHHHHHHHHhhc
Confidence 9999999877776543 332222267667899999999999999999999999998864
No 30
>PRK09104 hypothetical protein; Validated
Probab=100.00 E-value=3.9e-49 Score=404.00 Aligned_cols=373 Identities=14% Similarity=0.139 Sum_probs=289.8
Q ss_pred chHHHHhhcCchhHHHHHHHHHHHHhCCCCCccc------HHHHHHHHHHHHhCCCCeee--cccCceEEEEECCC--CC
Q 013442 36 PVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQE------FETSKLIRAELDQMGIPYKF--PVAVTGVVGYIGTG--QP 105 (443)
Q Consensus 36 ~~~~~~~~~~~~~~~~~i~ll~~l~~ipS~s~~E------~~~~~~l~~~l~~~G~~~~~--~~~~~~via~~~~~--~~ 105 (443)
..++.++++.++ +++++++++|++|||+|+++ .++++||.++|+++||+++. ..+++|+++++.+. .+
T Consensus 5 ~~~~~~~~~~~~--~~~~~~L~~lv~i~Svs~~~~~~~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~l~a~~~g~~~~~ 82 (464)
T PRK09104 5 LDPVLDHIDANL--DASLERLFALLRIPSISTDPAYAADCRKAADWLVADLASLGFEASVRDTPGHPMVVAHHEGPTGDA 82 (464)
T ss_pred HHHHHHHHHHhH--HHHHHHHHHHhcCCCCCCCccchHHHHHHHHHHHHHHHHCCCeEEEEecCCCCEEEEEecCCCCCC
Confidence 346888898888 99999999999999999764 67899999999999999875 23568999999642 35
Q ss_pred cEEEEEEecccccCcccCCCccc----cCCCC-----eeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccC
Q 013442 106 PFVALRADMDALAMEESVEWEHK----SKVPG-----KMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAE 173 (443)
Q Consensus 106 ~~I~~~~H~DtVp~~~~~~w~~~----~~~~g-----~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dE 173 (443)
|+|+|+||+||||+++.++|+++ .++++ +|||||+ ||+++++++|+++|++.+..++++|.|+|++||
T Consensus 83 ~~lll~gH~DvVp~~~~~~W~~~Pf~~~~~~~~~~~~~lyGRG~~D~Kg~laa~l~a~~~l~~~~~~~~~~i~~~~~~dE 162 (464)
T PRK09104 83 PHVLFYGHYDVQPVDPLDLWESPPFEPRIKETPDGRKVIVARGASDDKGQLMTFVEACRAWKAVTGSLPVRVTILFEGEE 162 (464)
T ss_pred CEEEEEecccCCCCCCcccCCCCCCcceEecCcCCcceEEEecccCCcHHHHHHHHHHHHHHHhcCCCCCcEEEEEECcc
Confidence 99999999999999887789754 34443 5999997 899999999999999987788999999999999
Q ss_pred C-ccchHHHHHHcCCC-CccceeeEecCCCCCCC-ceEEeecCcccccceEEEEEEEe--cCCCCCC-CCCCCcHHHHHH
Q 013442 174 E-GGGGAKKMLDAGAL-ENVEAIFGLHVSSLFPV-GTVASRPGPTLAAGGFFEAVING--KGGHAAI-PQHTIDPIVAAS 247 (443)
Q Consensus 174 E-g~~G~~~~~~~g~~-~~~d~~i~~~~~~~~~~-g~~~~~~g~~~~g~~~~~v~v~G--~~aHss~-p~~g~NAi~~~~ 247 (443)
| |+.|...++++... ...|++|+.++....+. ..+ ..+++|..+++|+++| +++|||. |+.|.||+..++
T Consensus 163 E~g~~g~~~~l~~~~~~~~~d~~iv~E~~~~~~~~~~i----~~~~kG~~~~~l~v~g~~~~~Hss~~~~~g~nai~~~~ 238 (464)
T PRK09104 163 ESGSPSLVPFLEANAEELKADVALVCDTGMWDRETPAI----TTSLRGLVGEEVTITAADRDLHSGLFGGAAANPIRVLT 238 (464)
T ss_pred ccCCccHHHHHHhhHHhcCCCEEEEeCCCCCCCCCeEE----EeecCCeEEEEEEEEeCCCCccccccCCccCCHHHHHH
Confidence 9 77888888775321 14688887653221111 122 2457899999999999 7899995 789999999999
Q ss_pred HHHHHHHHhhcccc------------------------------------CC------------CCCceEEEEEEEcCC-
Q 013442 248 NVIVSLQHLVSREA------------------------------------DP------------LDSQVLTVAKFEGGG- 278 (443)
Q Consensus 248 ~~i~~l~~~~~~~~------------------------------------~~------------~~~~t~~v~~i~gG~- 278 (443)
+++.+|++...+.. .+ ...+++|++.|+||.
T Consensus 239 ~~l~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~gg~~ 318 (464)
T PRK09104 239 RILAGLHDETGRVTLPGFYDGVEELPPEILAQWKALGFTAEAFLGPVGLSIPAGEKGRSVLEQIWSRPTCEINGIWGGYT 318 (464)
T ss_pred HHHHhccCCCCCEeCCccccCCCCCCHHHHHHHHhCCCCHHHHHHhcCCccccCcccHHHHHHHhhCCeEEEeccccCCC
Confidence 99999875321100 00 113689999999985
Q ss_pred ---cCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCc--ccCCHHHHHHHHHHHHHh
Q 013442 279 ---AFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPV--TVNNKNLHEHFQKVAADM 353 (443)
Q Consensus 279 ---~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~d~~~~~~~~~~~~~~ 353 (443)
..|+||++|++++|+|++|+++.+++.++|++.++... ..+..+++.. ....++ .+.++++++.+.+++++.
T Consensus 319 ~~~~~nvvP~~~~~~~diR~~p~~~~~~v~~~i~~~l~~~~-~~~~~v~~~~--~~~~~~~~~~~~~~~v~~l~~~~~~~ 395 (464)
T PRK09104 319 GEGFKTVIPAEASAKVSFRLVGGQDPAKIREAFRAYVRARL-PADCSVEFHD--HGGSPAIALPYDSPALAAAKAALSDE 395 (464)
T ss_pred CCCCccEecCceEEEEEEEeCCCCCHHHHHHHHHHHHHHhC-CCCeEEEEEe--cCCCCceECCCCCHHHHHHHHHHHHH
Confidence 46999999999999999999999999999999987531 1233444433 223344 356788999999999998
Q ss_pred cCCcccccCCCCCCCc-hHHHHHhh--cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 013442 354 LGVQNIKENRPLMGTE-DFSFFAEA--IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYL 425 (443)
Q Consensus 354 ~g~~~~~~~~~~~g~t-Da~~~~~~--ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~ 425 (443)
+|.++.. ...+|++ |++.|.+. +|++++++|.. ...+|++|||++++++.+++++|+.++..++
T Consensus 396 ~~~~~~~--~~~~g~~~~~~~~~~~~gip~v~~g~G~~------~~~aH~~nE~i~i~~l~~~~~~~~~ll~~~~ 462 (464)
T PRK09104 396 WGKPAVL--IGSGGSIPIVGDFKRILGMDSLLVGFGLD------DDRIHSPNEKYDLESFHKGIRSWARILAALA 462 (464)
T ss_pred hCCCcee--cCCCCcHHHHHHHHHHhCCCEEEecCCCC------CCCCcCCCCCcCHHHHHHHHHHHHHHHHHhh
Confidence 8876542 2344444 46776653 89876665522 2469999999999999999999999999886
No 31
>PRK07907 hypothetical protein; Provisional
Probab=100.00 E-value=6.7e-49 Score=400.65 Aligned_cols=370 Identities=16% Similarity=0.156 Sum_probs=287.8
Q ss_pred chHHHHhhcCchhHHHHHHHHHHHHhCCCCCcc------cHHHHHHHHHHHHhCCC-Ceeec--ccCceEEEEECCC-CC
Q 013442 36 PVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQ------EFETSKLIRAELDQMGI-PYKFP--VAVTGVVGYIGTG-QP 105 (443)
Q Consensus 36 ~~~~~~~~~~~~~~~~~i~ll~~l~~ipS~s~~------E~~~~~~l~~~l~~~G~-~~~~~--~~~~~via~~~~~-~~ 105 (443)
.+++.++++++. +++++++++|++|||+|++ |.++++||.++|+++|| +++.. ++++|++++++++ ++
T Consensus 6 ~~~~~~~i~~~~--~~~~~ll~~LV~ipS~s~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~nl~a~~~~~~~~ 83 (449)
T PRK07907 6 ADDLRARVAELL--PRVRADLEELVRIPSVAADPFRREEVARSAEWVADLLREAGFDDVRVVSADGAPAVIGTRPAPPGA 83 (449)
T ss_pred HHHHHHHHHHHH--HHHHHHHHHHhcCCCCCCCccchhhHHHHHHHHHHHHHHcCCceEEEEecCCCCEEEEEecCCCCC
Confidence 457888888877 9999999999999999964 57899999999999998 67653 4678999999654 35
Q ss_pred cEEEEEEecccccCcccCCCccc----cCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccc
Q 013442 106 PFVALRADMDALAMEESVEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGG 177 (443)
Q Consensus 106 ~~I~~~~H~DtVp~~~~~~w~~~----~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~ 177 (443)
|+|+|+||+||||+++..+|+++ .++||+|||||+ ||+++++++|+++| +..++++|.|++++||| |+.
T Consensus 84 ~~lll~gH~DvVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l---~~~~~~~i~~~~~~dEE~g~~ 160 (449)
T PRK07907 84 PTVLLYAHHDVQPPGDPDAWDSPPFELTERDGRLYGRGAADDKGGIAMHLAALRAL---GGDLPVGVTVFVEGEEEMGSP 160 (449)
T ss_pred CEEEEEcccCCCCCCCccccCCCCceeEEECCEEEECCccCCcHHHHHHHHHHHHh---ccCCCCcEEEEEEcCcccCCc
Confidence 89999999999999987789754 467999999998 89999999999999 34678999999999999 778
Q ss_pred hHHHHHHcCC-CCccceeeEecCCCCCCCceEEeecCcccccceEEEEEEE--ecCCCCCC-CCCCCcHHHHHHHHHHHH
Q 013442 178 GAKKMLDAGA-LENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVIN--GKGGHAAI-PQHTIDPIVAASNVIVSL 253 (443)
Q Consensus 178 G~~~~~~~g~-~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~v~v~--G~~aHss~-p~~g~NAi~~~~~~i~~l 253 (443)
|+++++++.. .-+.|++++.++.... .+... ...+++|..+++++++ |+++|||. +..+.||+..+++++.+|
T Consensus 161 g~~~~l~~~~~~~~~d~~iv~E~~~~~-~~~p~--i~~~~kG~~~~~l~v~~~G~~~Hss~~~~~~~nAi~~~~~~l~~l 237 (449)
T PRK07907 161 SLERLLAEHPDLLAADVIVIADSGNWS-VGVPA--LTTSLRGNADVVVTVRTLEHAVHSGQFGGAAPDALTALVRLLATL 237 (449)
T ss_pred cHHHHHHhchHhhcCCEEEEecCCcCC-CCCeE--EEEecCCcEEEEEEEEECCCCCCCccccccCCCHHHHHHHHHHhh
Confidence 9999988642 1246777776543211 11111 1235789999999998 89999997 467899999999999999
Q ss_pred HHhhcccc-------CC---------------------------------CCCceEEEEEEEc---CCcCccccCcEEEE
Q 013442 254 QHLVSREA-------DP---------------------------------LDSQVLTVAKFEG---GGAFNIIPDSVTIG 290 (443)
Q Consensus 254 ~~~~~~~~-------~~---------------------------------~~~~t~~v~~i~g---G~~~n~vP~~a~~~ 290 (443)
.+...+.. .+ ...++++++.|++ |.+.|+||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~~~~~g~~~nvIP~~a~~~ 317 (449)
T PRK07907 238 HDEDGNVAVDGLDATEPWLGVDYDEERFRADAGVLDGVELIGTGSVADRLWAKPAITVIGIDAPPVAGASNALPPSARAR 317 (449)
T ss_pred CCCCCCEeCCCccCCCCcccccccHHHHHHHhhhhhcccccCCChHHHHhhhcCcEEEEeeecCCCCCCCCEecCceEEE
Confidence 76432100 00 1246899999986 46889999999999
Q ss_pred EEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcc--cCCHHHHHHHHHHHHHhcCCcccccCCCCCCC
Q 013442 291 GTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVT--VNNKNLHEHFQKVAADMLGVQNIKENRPLMGT 368 (443)
Q Consensus 291 ~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~ 368 (443)
+|+|+.|+++.+++.+.|++.++... ..+.++++++ ...++|+ +.++++++.+++++++.+|.++. ....+|+
T Consensus 318 ~diR~~p~~~~e~v~~~l~~~l~~~~-~~~~~~~~~~--~~~~~p~~~~~~~~~~~~l~~a~~~~~g~~~~--~~~~~g~ 392 (449)
T PRK07907 318 LSLRVAPGQDAAEAQDALVAHLEAHA-PWGAHVTVER--GDAGQPFAADASGPAYDAARAAMREAWGKDPV--DMGMGGS 392 (449)
T ss_pred EEEEcCCCCCHHHHHHHHHHHHHhcC-CCCcEEEEEE--CCCcCceeCCCCCHHHHHHHHHHHHHhCCCce--ecCCCCc
Confidence 99999999999999999999987642 2355666665 3334444 45688999999999998888763 2344555
Q ss_pred ch-HHHHHhh---cCcEEEEecCCCCCCCCC-CCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 013442 369 ED-FSFFAEA---IPGYFYYLGMNDETKGKF-ETGHSPYFRVNEDALPYGAALHASLATRYL 425 (443)
Q Consensus 369 tD-a~~~~~~---ip~~~~~~G~~~~~pG~~-~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~ 425 (443)
++ .+.|.+. +|+++ +| ||+. ..+|+|||+++++++.+++++|++++..|.
T Consensus 393 ~~~~~~~~~~~~~~~~v~--~G-----pg~~~~~aH~~nE~i~i~~l~~~~~~~~~~l~~~~ 447 (449)
T PRK07907 393 IPFIAELQEAFPQAEILV--TG-----VEDPKTRAHSPNESVHLGELERAAVAEALLLARLA 447 (449)
T ss_pred HHHHHHHHHhcCCCcEEE--ec-----cCCCCCCCcCCCCCcCHHHHHHHHHHHHHHHHHHh
Confidence 44 2445443 45444 55 4543 479999999999999999999999998874
No 32
>PRK07473 carboxypeptidase; Provisional
Probab=100.00 E-value=2.8e-48 Score=386.65 Aligned_cols=346 Identities=18% Similarity=0.125 Sum_probs=271.8
Q ss_pred HHHHHHHHHHHhCCCCCcccH---HHHHHHHHHHHhCCCCeeecc---c-CceEEEEECCC--CCcEEEEEEecccccCc
Q 013442 50 YWMVNIRRKIHENPELGFQEF---ETSKLIRAELDQMGIPYKFPV---A-VTGVVGYIGTG--QPPFVALRADMDALAME 120 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~~E~---~~~~~l~~~l~~~G~~~~~~~---~-~~~via~~~~~--~~~~I~~~~H~DtVp~~ 120 (443)
+++++++++|++|||+|++|. ++++|+.++|+++|++++... + .+++++++++. .+|+|+|+||+||||+.
T Consensus 11 ~~~~~~l~~Lv~i~S~s~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~gH~DtV~~~ 90 (376)
T PRK07473 11 EAMLAGLRPWVECESPTWDAAAVNRMLDLAARDMAIMGATIERIPGRQGFGDCVRARFPHPRQGEPGILIAGHMDTVHPV 90 (376)
T ss_pred HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEecCCCCCCCeEEEEeCCCCCCCCeEEEEecCCCCCCC
Confidence 789999999999999999885 677899999999999987632 2 25799998642 35899999999999764
Q ss_pred cc-CCCccccCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchHHHHHHcCCCCccceee
Q 013442 121 ES-VEWEHKSKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIF 195 (443)
Q Consensus 121 ~~-~~w~~~~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~~~~~g~~~~~d~~i 195 (443)
.. ..+|| .++||++||||+ ||+++++++|+++|++.+..++.+|.|+|++||| |+.|++.+++++.. ..|+++
T Consensus 91 ~~~~~~p~-~~~~g~lyGrG~~D~Kgglaa~l~A~~~l~~~~~~~~~~v~~~~~~dEE~g~~g~~~~~~~~~~-~~d~~i 168 (376)
T PRK07473 91 GTLEKLPW-RREGNKCYGPGILDMKGGNYLALEAIRQLARAGITTPLPITVLFTPDEEVGTPSTRDLIEAEAA-RNKYVL 168 (376)
T ss_pred CCccCCCe-EEECCEEEcCchhhchHHHHHHHHHHHHHHHcCCCCCCCEEEEEeCCcccCCccHHHHHHHhhc-cCCEEE
Confidence 41 12245 367899999996 9999999999999998887778899999999999 77899999986543 468888
Q ss_pred EecCCCCCCCceEEeecCcccccceEEEEEEEecCCCCC-CCCCCCcHHHHHHHHHHHHHHhhccccCCCCCceEEEEEE
Q 013442 196 GLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAA-IPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKF 274 (443)
Q Consensus 196 ~~~~~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss-~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i 274 (443)
+.++. ...+.+. .+++|..+++|+++|+++|++ .|+.|+||+..+++++.+|+++.. ...++|++.|
T Consensus 169 v~ep~--~~~~~v~----~~~~G~~~~~v~~~G~~aHag~~p~~g~nAi~~~~~~i~~l~~~~~------~~~~~~vg~i 236 (376)
T PRK07473 169 VPEPG--RPDNGVV----TGRYAIARFNLEATGRPSHAGATLSEGRSAIREMARQILAIDAMTT------EDCTFSVGIV 236 (376)
T ss_pred EeCCC--CCCCCEE----EECeeeEEEEEEEEeEcCCCCCCcccCcCHHHHHHHHHHHHHHhcC------CCceEeEeeE
Confidence 76542 1222232 346799999999999999987 799999999999999999988742 2358999999
Q ss_pred EcCCcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcccC---CHHHHHHHHHHHH
Q 013442 275 EGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVN---NKNLHEHFQKVAA 351 (443)
Q Consensus 275 ~gG~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~---d~~~~~~~~~~~~ 351 (443)
+||...|+||++|++.+++|.....+.+++.+++.+.++ ...+++++++. ....|++.. ++++++.++++.+
T Consensus 237 ~gg~~~n~VP~~~~~~~d~r~~~~~~~~~~~~~i~~~~~---~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~ 311 (376)
T PRK07473 237 HGGQWVNCVATTCTGEALSMAKRQADLDRGVARMLALSG---TEDDVTFTVTR--GVTRPVWEPDAGTMALYEKARAIAG 311 (376)
T ss_pred EcCCCCcCCCCceEEEEEEEeCCHhHHHHHHHHHHHhhC---cCCCeEEEEEc--cccCCCCCCChhHHHHHHHHHHHHH
Confidence 999999999999999999998887777777766665544 22344555542 223344422 2468888877766
Q ss_pred HhcCCcccccCCCCCCCchHHHHHhh-cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 013442 352 DMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRY 424 (443)
Q Consensus 352 ~~~g~~~~~~~~~~~g~tDa~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l 424 (443)
.. |.++. ...++|+||+++|... +|++. ++| ||. ..+|++|||++++++.+++++|++++.++
T Consensus 312 ~~-g~~~~--~~~~~g~tDa~~~~~~giP~v~-g~G-----pg~-~~~H~~dE~v~i~~l~~~~~vl~~~l~~~ 375 (376)
T PRK07473 312 QL-GLSLP--HGSAGGGSDGNFTGAMGIPTLD-GLG-----VRG-ADYHTLNEHIEVDSLAERGRLMAGLLATL 375 (376)
T ss_pred Hc-CCCCc--cccCccccHhhhHHhcCCCEEE-ecc-----CCC-CCCCCCCceEecccHHHHHHHHHHHHHhc
Confidence 65 77653 3467889999999876 99765 567 443 45899999999999999999999998753
No 33
>PRK04443 acetyl-lysine deacetylase; Provisional
Probab=100.00 E-value=2e-48 Score=384.57 Aligned_cols=332 Identities=16% Similarity=0.149 Sum_probs=266.2
Q ss_pred HHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeecccCceEEEEECCCCCcEEEEEEecccccCcccCCCcccc
Q 013442 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWEHKS 129 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~~~~~I~~~~H~DtVp~~~~~~w~~~~ 129 (443)
+++++++++|++|||++++|.++++|+.++|+++||+++... ..|+++++++. +|+|+|+||+||||... ++ .
T Consensus 6 ~~~~~~l~~Lv~i~s~s~~e~~~~~~l~~~l~~~G~~~~~~~-~~n~i~~~~~~-~~~l~~~~H~DtVp~~~----p~-~ 78 (348)
T PRK04443 6 LEARELLKGLVEIPSPSGEEAAAAEFLVEFMESHGREAWVDE-AGNARGPAGDG-PPLVLLLGHIDTVPGDI----PV-R 78 (348)
T ss_pred HHHHHHHHHHHcCCCCCCChHHHHHHHHHHHHHcCCEEEEcC-CCcEEEEcCCC-CCEEEEEeeccccCCCC----Cc-E
Confidence 779999999999999999999999999999999999987643 35899998543 48999999999999532 33 3
Q ss_pred CCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchHHHHHHcCCCCccceeeEecCCCCCCC
Q 013442 130 KVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLFPV 205 (443)
Q Consensus 130 ~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~~~~~g~~~~~d~~i~~~~~~~~~~ 205 (443)
++||++||||+ ||+++++++|+++| +.+++++|.|++++||| ++.|...++.++. .+|++++.++ +
T Consensus 79 ~~~g~iyGrG~~D~Kg~~aa~l~A~~~l---~~~~~~~i~~~~~~dEE~g~~~~~~~l~~~~--~~d~~iv~Ep-----t 148 (348)
T PRK04443 79 VEDGVLWGRGSVDAKGPLAAFAAAAARL---EALVRARVSFVGAVEEEAPSSGGARLVADRE--RPDAVIIGEP-----S 148 (348)
T ss_pred eeCCeEEeecccccccHHHHHHHHHHHh---cccCCCCEEEEEEcccccCChhHHHHHHhcc--CCCEEEEeCC-----C
Confidence 56899999997 89999999999999 34789999999999999 6666666666654 5788887543 3
Q ss_pred ceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHHhhc---cccCCCCCceEEEEEEEcCCcCcc
Q 013442 206 GTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVS---READPLDSQVLTVAKFEGGGAFNI 282 (443)
Q Consensus 206 g~~~~~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~~~~---~~~~~~~~~t~~v~~i~gG~~~n~ 282 (443)
+.. ....+++|..+++|+++|+++|||.| |.||+..+++++..|+++.. .....+...++|++.|+ ...|+
T Consensus 149 ~~~--~i~~~~kG~~~~~l~~~G~~~Hss~~--g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~i~~i~--~~~n~ 222 (348)
T PRK04443 149 GWD--GITLGYKGRLLVTYVATSESFHSAGP--EPNAAEDAIEWWLAVEAWFEANDGRERVFDQVTPKLVDFD--SSSDG 222 (348)
T ss_pred Ccc--ceeeecccEEEEEEEEEeCCCccCCC--CCCHHHHHHHHHHHHHHHHhcCccccccccccceeeeEEe--cCCCC
Confidence 311 12245689999999999999999987 79999999999999987653 11122446788999988 45799
Q ss_pred ccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcc--cCCHHHHHHHHHHHHHhcCCcccc
Q 013442 283 IPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVT--VNNKNLHEHFQKVAADMLGVQNIK 360 (443)
Q Consensus 283 vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~d~~~~~~~~~~~~~~~g~~~~~ 360 (443)
||+.|++.+|+|++|+++.+++.++|++++. +. ++++ ...++|+ +.++++++.+++++++..+ ++.
T Consensus 223 iP~~~~~~~d~R~~p~~~~~~i~~~i~~~~~------~~--~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~- 290 (348)
T PRK04443 223 LTVEAEMTVGLRLPPGLSPEEAREILDALLP------TG--TVTF--TGAVPAYMVSKRTPLARAFRVAIREAGG-TPR- 290 (348)
T ss_pred CCceEEEEEEEccCCCCCHHHHHHHHHHhCC------Cc--EEEE--ecCCCceecCCCCHHHHHHHHHHHHhcC-Ccc-
Confidence 9999999999999999999999999999873 23 3333 2233443 4567899999999999855 332
Q ss_pred cCCCCCCCchHHHHHh-h-cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 013442 361 ENRPLMGTEDFSFFAE-A-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRY 424 (443)
Q Consensus 361 ~~~~~~g~tDa~~~~~-~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l 424 (443)
....+|++|+++|.+ . +|++. +| ||+...+|++|||++++++.+++++|+.++.+|
T Consensus 291 -~~~~~g~tD~~~~~~~~gip~v~--~G-----pg~~~~~H~~dE~i~i~~l~~~~~~~~~~~~~l 348 (348)
T PRK04443 291 -LKRKTGTSDMNVVAPAWGCPMVA--YG-----PGDSDLDHTPDEHLPLAEYLRAIAVLTDVLERL 348 (348)
T ss_pred -eeccccCCcHHHHhhhcCCCEEE--EC-----CCCccccCCCcccccHHHHHHHHHHHHHHHhhC
Confidence 234678999999976 3 88764 55 555567999999999999999999999998653
No 34
>TIGR01900 dapE-gram_pos succinyl-diaminopimelate desuccinylase. This enzyme is involved in the biosynthesis of lysine, and is related to the enzyme acetylornithine deacetylase and other amidases and peptidases found within pfam01546.
Probab=100.00 E-value=3.1e-48 Score=386.12 Aligned_cols=331 Identities=18% Similarity=0.181 Sum_probs=254.3
Q ss_pred HHHHHHhCCCCCcccHHHHHHHHHHHHhCCCC-eeecccCceEEEEECCCCCcEEEEEEecccccCccc--CCCcc----
Q 013442 55 IRRKIHENPELGFQEFETSKLIRAELDQMGIP-YKFPVAVTGVVGYIGTGQPPFVALRADMDALAMEES--VEWEH---- 127 (443)
Q Consensus 55 ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~-~~~~~~~~~via~~~~~~~~~I~~~~H~DtVp~~~~--~~w~~---- 127 (443)
++++|++|||+|++|.++++||.++|+++|++ ++....+.|++++++++++|+|+|+|||||||+++. ..|++
T Consensus 1 ll~~Lv~ipS~s~~e~~~~~~i~~~l~~~g~~~~~~~~~~~nvva~~~~~~~~~l~l~gH~DtVp~~~~~~~~W~~~p~~ 80 (373)
T TIGR01900 1 LLQQIMDIFSPSDHEGPIADEIEAALNNLELEGLEVFRFGDNVLARTDFGKASRVILAGHIDTVPIADNFPPKWLEPGDS 80 (373)
T ss_pred ChHHHhCCCCCCchHHHHHHHHHHHHhhccccCceEEEECCEEEEecCCCCCCeEEEeCccccccCCCCChhhhccCccc
Confidence 47899999999999999999999999999653 322222459999986544689999999999999752 45854
Q ss_pred --------ccCCCCeeecCcc---hHHHHHHHHHHHHHHc--ccccCCceEEEEEeccCC-cc--chHHHHHHcCC-CCc
Q 013442 128 --------KSKVPGKMHACGH---DAHVAMLLGAAKMLQV--FRHEIKGTIVLVFQPAEE-GG--GGAKKMLDAGA-LEN 190 (443)
Q Consensus 128 --------~~~~~g~l~GrG~---kg~~a~~l~a~~~l~~--~~~~l~~~i~~i~~~dEE-g~--~G~~~~~~~g~-~~~ 190 (443)
..++||+|||||+ ||+++++|+|+++|++ .+..++++|.|+|++||| ++ .|+++++++.. +..
T Consensus 81 ~~~~~~~~~~~~~g~lyGRGa~DmKgg~aa~l~a~~~l~~~~~~~~~~~~i~~~~~~dEE~~~~~~G~~~~~~~~~~~~~ 160 (373)
T TIGR01900 81 LIREEIAHAHPEDGILWGCGATDMKAGDAVMLHLAATLDGRAPETELKHDLTLIAYDCEEVAAEKNGLGHIRDAHPDWLA 160 (373)
T ss_pred ccccccccccccCCEEEecCchhhhHHHHHHHHHHHHHhhhccccCCCCCEEEEEEecccccCCCCCHHHHHHhCccccc
Confidence 2567899999998 8999999999999953 355788999999999999 43 59999988643 235
Q ss_pred cceeeEecCCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHHhhcccc--CC-CCCc
Q 013442 191 VEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREA--DP-LDSQ 267 (443)
Q Consensus 191 ~d~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~~~~~~~--~~-~~~~ 267 (443)
+|++++.++ ++. ....+++|..+++|+++|+++|+|+|+.|.||+..+++++.+|+++..... +. ....
T Consensus 161 ~d~~iv~Ep-----t~~---~i~~g~~G~~~~~i~v~G~~~H~s~p~~g~NAi~~~~~~i~~l~~l~~~~~~~~~~~~~~ 232 (373)
T TIGR01900 161 ADFAIIGEP-----TGG---GIEAGCNGNIRFDVTAHGVAAHSARAWLGDNAIHKAADIINKLAAYEAAEVNIDGLDYRE 232 (373)
T ss_pred CCEEEEECC-----CCC---cccccceeeEEEEEEEEeeccccCCCCCCCCHHHHHHHHHHHHHHhhcccccccCCcccc
Confidence 687776543 322 123457899999999999999999999999999999999999988753221 11 2246
Q ss_pred eEEEEEEEcCCcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHH--------HHHh---hC-CeEEEEeeccCCCCc
Q 013442 268 VLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMK--------QASV---QR-CNATVTFDDKSFYPV 335 (443)
Q Consensus 268 t~~v~~i~gG~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~--------~~~~---~~-~~~~v~~~~~~~~~~ 335 (443)
++|++.|+||.+.|+||++|++++|+|+.|+++.+++.++|++.++. .... .+ ..++++. ....++
T Consensus 233 t~~v~~I~GG~~~nvVP~~a~~~~diR~~p~~~~e~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 310 (373)
T TIGR01900 233 GLNATFCEGGKANNVIPDEARMHLNFRFAPDKDLAEAKALMMGADAGAELGNGEHVAEGGEFDGQDGIEIAM--EDEAGG 310 (373)
T ss_pred eEEEEEEeCCCCCcccCCeEEEEEEEecCCCcCHHHHHHHHHhhhhhhhhhHHHHHHhhccccccccceEEE--cccCCC
Confidence 89999999999999999999999999999999999999999765432 2211 11 1233432 111121
Q ss_pred --ccCCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhh-cCcEEEEecCCCCCCCCCCCCCCCCCCCC
Q 013442 336 --TVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVN 406 (443)
Q Consensus 336 --~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~ 406 (443)
.+.++++++.+.+++++.+|.++. ...|+||+++|... +|+++ +| ||+...+|++|||++
T Consensus 311 ~~~~~~~~~~~~~~~a~~~~~~~~~~----~~~g~tD~~~~~~~gip~v~--~G-----pg~~~~aH~~dE~v~ 373 (373)
T TIGR01900 311 ALPGLGAPLAQDLIDAVGEEKGRDPL----AKFGWTDVARFSALGIPALN--FG-----AGDPLFAHKHDEQCP 373 (373)
T ss_pred CCCCCCCHHHHHHHHHHHhccCCCcc----cccCCccHHHHHhcCCCEEE--eC-----CCChhhccCCCCCCC
Confidence 234678888888898888777652 25678999999866 89775 55 666678999999985
No 35
>TIGR01886 dipeptidase dipeptidase PepV. This model represents a small clade of dipeptidase enzymes which are members of the larger M25 subfamily of metalloproteases. Two characterized enzymes are included in the seed. One, from Lactococcus lactis has been shown to act on a wide range of dipeptides, but not larger peptides. The enzyme from Lactobacillus delbrueckii was originally characterized as a Xaa-His dipeptidase, specifically a carnosinase (beta-Ala-His) by complementation of an E. coli mutant. Further study, including the crystallization of the enzyme, has shown it to also be a non-specific dipeptidase. This group also includes enzymes from Streptococcus and Enterococcus.
Probab=100.00 E-value=2.6e-48 Score=396.67 Aligned_cols=356 Identities=15% Similarity=0.095 Sum_probs=271.8
Q ss_pred HHHhhcCchhHHHHHHHHHHHHhCCCCCcc------------cHHHHHHHHHHHHhCCCCeeecccCceEEEEEC-CCCC
Q 013442 39 FLDFAKKPEIFYWMVNIRRKIHENPELGFQ------------EFETSKLIRAELDQMGIPYKFPVAVTGVVGYIG-TGQP 105 (443)
Q Consensus 39 ~~~~~~~~~~~~~~i~ll~~l~~ipS~s~~------------E~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~-~~~~ 105 (443)
+.+++++++ +++++++++|++|||++.+ +.++++|+.++|+++||+++..+ |.++.+. +.++
T Consensus 4 ~~~~i~~~~--~~~~~~l~~lv~ipS~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~G~~~~~~~---~~~~~~~~~~~~ 78 (466)
T TIGR01886 4 FKEEVEARK--DALLEDLEELLRIDSSEDLENATEEYPFGPGPVDALTKFLSFAERDGFTTKNFD---NYAGHVEYGAGD 78 (466)
T ss_pred HHHHHHHhH--HHHHHHHHHHhCCCCcCCCCCCCccCCCChhHHHHHHHHHHHHHHCCCeEEEec---CCceeEEecCCC
Confidence 566777777 9999999999999999753 46689999999999999987532 3333332 2335
Q ss_pred cEEEEEEecccccCcccCCCccc----cCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccc
Q 013442 106 PFVALRADMDALAMEESVEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGG 177 (443)
Q Consensus 106 ~~I~~~~H~DtVp~~~~~~w~~~----~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~ 177 (443)
|+|+|+||+||||+++ +|.++ .++||+|||||+ ||+++++++|+++|++.+..++++|.|++++||| ++.
T Consensus 79 ~~l~~~gH~DvVp~~~--~W~~~Pf~~~~~dg~lyGRG~~D~Kg~~~a~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~ 156 (466)
T TIGR01886 79 ERLGIIGHMDVVPAGE--GWTRDPFEPEIDEGRIYARGASDDKGPSLAAYYAMKILKELGLPPSKKIRFVVGTNEETGWV 156 (466)
T ss_pred CEEEEEeecccCCCCC--CCcCCCCCeEEECCEEEecCccccchHHHHHHHHHHHHHHhCCCCCCCEEEEEECccccCcc
Confidence 8999999999999984 69644 577899999998 8999999999999999998999999999999999 678
Q ss_pred hHHHHHHcCCCCccceeeEecCCCCCCC-----ceEEee-------------------------c---------------
Q 013442 178 GAKKMLDAGALENVEAIFGLHVSSLFPV-----GTVASR-------------------------P--------------- 212 (443)
Q Consensus 178 G~~~~~~~g~~~~~d~~i~~~~~~~~~~-----g~~~~~-------------------------~--------------- 212 (443)
|++++++++. .+|++++.. ++.|. |..... +
T Consensus 157 g~~~~~~~~~--~~d~~~~~d--~~~~~~~ge~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~i~~~~~~~~ 232 (466)
T TIGR01886 157 DMDYYFKHEE--TPDFGFSPD--AEFPIINGEKGNFTLELSFKGDNKGDYVLDSFKAGLAENMVPQVARAVISGPDAEAL 232 (466)
T ss_pred cHHHHHhcCc--CCCEEEECC--CCceeEEEecceEEEEEEEecCCCCceeEEEEEcCCcCCccCCeeEEEEecCCHHHH
Confidence 9999998765 245544322 11110 101100 0
Q ss_pred ------Ccccccce---------EEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHH----------HHhhc---c-----
Q 013442 213 ------GPTLAAGG---------FFEAVINGKGGHAAIPQHTIDPIVAASNVIVSL----------QHLVS---R----- 259 (443)
Q Consensus 213 ------g~~~~g~~---------~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l----------~~~~~---~----- 259 (443)
...++|.. |++|+++|+++|||.|+.|+|||..|++++.++ +.+.. .
T Consensus 233 ~~~~~~~~~~kg~~~~~~~~~~~~~~i~v~G~~aH~s~P~~G~NAi~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~ 312 (466)
T TIGR01886 233 KAAYESFLADKASLDGSFEINDESATIVLIGKGAHGAAPQVGINSATFLALFLNQYAFAGGAKNFIHFLAEVEHEDFYGE 312 (466)
T ss_pred HHHHHHHHhhccCceEEEEEeCCEEEEEEEeeEcccCCCCCCcCHHHHHHHHHHhccCChhHHHHHHHHHHhcCCCCCcc
Confidence 01234433 799999999999999999999999999988872 22210 0
Q ss_pred ------ccCCCCCceEEEEEEEcCCcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCC
Q 013442 260 ------EADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFY 333 (443)
Q Consensus 260 ------~~~~~~~~t~~v~~i~gG~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~ 333 (443)
....++..|+|++.|+||.. | ++|++.+|+|++|+++.+++.++|++.+.. ..++++.. ....
T Consensus 313 ~~~~~~~~~~~g~~S~nvgvI~gG~~-~---~~~~l~iD~R~~Pge~~eev~~eI~~~i~~-----~~~v~~~~--~~~~ 381 (466)
T TIGR01886 313 KLGIAFHDELMGDLAMNAGMFDFDHA-N---KESKLLLNFRYPQGTSPETMQKQVLDKFGG-----IVDVTYNG--HFEE 381 (466)
T ss_pred cCCCcccccCcCceEEEeEEEEEecC-C---ceEEEEEEEecCCCCCHHHHHHHHHHHHhc-----ccEEEEec--ccCC
Confidence 01234577999999999965 4 899999999999999999999999998763 22333311 1112
Q ss_pred Cc-ccCCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhhcCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHH
Q 013442 334 PV-TVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPY 412 (443)
Q Consensus 334 ~~-~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~~~~~ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~ 412 (443)
|. .+.++++++.+.+++++.+|.++. ....+|+||+++|.+.+|..+ +| ||+...+|++|||++++++.+
T Consensus 382 P~~~~~ds~lv~~l~~a~~~v~G~~~~--~~~~~ggTDa~~~~~~i~~gv--~g-----PG~~~~aH~~dE~V~i~el~~ 452 (466)
T TIGR01886 382 PHYVPGSDPLVQTLLKVYEKHTGKKGH--EVIIGGGTYGRLLERGVAYGA--MF-----EGGPDVMHQANEFMMLDDLIL 452 (466)
T ss_pred CcccCCCCHHHHHHHHHHHHHhCCCCc--eeeecCccHHHhccccccccc--cc-----CCCCCCccCCCcceEHHHHHH
Confidence 21 245679999999999998887653 346889999999985566443 34 777788999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 013442 413 GAALHASLATRYL 425 (443)
Q Consensus 413 ~~~~~a~~~~~l~ 425 (443)
++++|+.++.++|
T Consensus 453 a~~iy~~~i~~l~ 465 (466)
T TIGR01886 453 AAAIYAEAIYELA 465 (466)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999987
No 36
>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=4.9e-48 Score=382.91 Aligned_cols=334 Identities=18% Similarity=0.194 Sum_probs=265.8
Q ss_pred HHHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhC-CCCeeecccCceEEEEECCCCCcEEEEEEecccccCcccCCCcc
Q 013442 49 FYWMVNIRRKIHENPELGFQEFETSKLIRAELDQM-GIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWEH 127 (443)
Q Consensus 49 ~~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~-G~~~~~~~~~~~via~~~~~~~~~I~~~~H~DtVp~~~~~~w~~ 127 (443)
.+++++++++|++|||+|++|.++++||.++|+++ |+++... ++|++++++++.+++|+|+||+||||+++ .+++
T Consensus 6 ~~~~~~~l~~li~ips~s~~e~~~~~~l~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~i~l~~H~Dtvp~~~--~~~~ 81 (352)
T PRK13007 6 AADLAELTAALVDIPSVSGDEKALADAVEAALRALPHLEVIRH--GNSVVARTDLGRPSRVVLAGHLDTVPVAD--NLPS 81 (352)
T ss_pred HHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHhCcCceEEec--CCeEEEEccCCCCCeEEEEccccccCCCC--CCCc
Confidence 37899999999999999999999999999999996 8887653 56899999655457899999999999876 3544
Q ss_pred ccCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-cc--chHHHHHHcC-CCCccceeeEecCC
Q 013442 128 KSKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG--GGAKKMLDAG-ALENVEAIFGLHVS 200 (443)
Q Consensus 128 ~~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~--~G~~~~~~~g-~~~~~d~~i~~~~~ 200 (443)
. ++||+|||||+ |++++++|+|+++|. .++++|.|+|++||| ++ .|+++++++. .+.++|++++.++.
T Consensus 82 ~-~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~----~~~~~i~~~~~~~EE~~~~~~G~~~~~~~~~~~~~~d~~i~~ep~ 156 (352)
T PRK13007 82 R-REGDRLYGCGASDMKSGLAVMLHLAATLA----EPAHDLTLVFYDCEEVEAEANGLGRLAREHPEWLAGDFAILLEPT 156 (352)
T ss_pred c-eeCCEEEccCcccccHHHHHHHHHHHHhh----ccCCCeEEEEEecccccCCcccHHHHHHhcccccCCCEEEEecCC
Confidence 3 56899999998 799999999999993 478899999999999 44 5888888753 23457888876542
Q ss_pred CCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHHhhccccC---CCCCceEEEEEEEcC
Q 013442 201 SLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREAD---PLDSQVLTVAKFEGG 277 (443)
Q Consensus 201 ~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~~~~~~~~---~~~~~t~~v~~i~gG 277 (443)
. +.+ ..+++|..+++|+++|+++|||.|+.|.||+..+++++.+|+++..+... ...+.++|++.|+||
T Consensus 157 ~----~~i----~~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~i~gG 228 (352)
T PRK13007 157 D----GVI----EAGCQGTLRVTVTFHGRRAHSARSWLGENAIHKAAPVLARLAAYEPREVVVDGLTYREGLNAVRISGG 228 (352)
T ss_pred C----Cce----EeeccceEEEEEEEEecccccCCCccCcCHHHHHHHHHHHHHHhcccccccCCCCccceeEeEeEecC
Confidence 1 222 23467999999999999999999999999999999999999887533211 111358999999999
Q ss_pred CcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcccCCHHHHHHHHHHHHHhcCCc
Q 013442 278 GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQ 357 (443)
Q Consensus 278 ~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~ 357 (443)
...|+||++|++.+|+|++|+.+.+++.++|++.++.. . ++++... ..+++ ...++++++.+.++. |.+
T Consensus 229 ~~~nviP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~----~-~~~~~~~-~~~~~-~~~~~~~~~~~~~~~----g~~ 297 (352)
T PRK13007 229 VAGNVIPDECVVNVNYRFAPDRSLEEALAHVREVFDGF----A-EVEVTDL-APGAR-PGLDHPAAAALVAAV----GGE 297 (352)
T ss_pred CcCccCCCeEEEEEEEeeCCCCCHHHHHHHHHHHhccc----c-EEEeecc-cCCCC-CCCCCHHHHHHHHHh----CCC
Confidence 99999999999999999999999999999999887642 1 3444221 22222 234667777776652 543
Q ss_pred ccccCCCCCCCchHHHHHhh-cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHH
Q 013442 358 NIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLA 421 (443)
Q Consensus 358 ~~~~~~~~~g~tDa~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~ 421 (443)
+ ....|++|++++... +|++. +| ||....+|++|||++++++.+++++|+.++
T Consensus 298 ~----~~~~g~td~~~~~~~Gip~v~--~G-----pg~~~~~H~~~E~v~i~~l~~~~~~~~~~~ 351 (352)
T PRK13007 298 V----RAKYGWTDVARFSALGIPAVN--FG-----PGDPALAHQRDEHVPVAQITACARILRRWL 351 (352)
T ss_pred C----ccccccchHHHHHhCCCCEEE--eC-----CCchhhccCCCCceEHHHHHHHHHHHHHHh
Confidence 3 235678999999877 99775 55 566668999999999999999999999875
No 37
>TIGR01883 PepT-like peptidase T-like protein. This model represents a clade of enzymes closely related to Peptidase T, an aminotripeptidase found in bacteria. This clade consists of gram positive bacteria of which several additionally contain a Peptidase T gene.
Probab=100.00 E-value=8.6e-48 Score=382.39 Aligned_cols=340 Identities=19% Similarity=0.190 Sum_probs=277.1
Q ss_pred HHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeecc------cCceEEEEECCC-CCcEEEEEEecccccCcccCC
Q 013442 52 MVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPV------AVTGVVGYIGTG-QPPFVALRADMDALAMEESVE 124 (443)
Q Consensus 52 ~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~~------~~~~via~~~~~-~~~~I~~~~H~DtVp~~~~~~ 124 (443)
+++++++|++|||+|++|.++++||.++|+++||+++... +++|++++++++ ++|+|+|+||+||||+++ .
T Consensus 2 ~~~~~~~l~~i~s~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~l~~H~D~V~~~~--~ 79 (361)
T TIGR01883 2 LKKYFLELIQIDSESGKEKAILTYLKKQITKLGIPVSLDEVPAEVSNDNNLIARLPGTVKFDTIFFCGHMDTVPPGA--G 79 (361)
T ss_pred hHHHHHHHeecCCCCCcHHHHHHHHHHHHHHcCCEEEEeccccccCCCceEEEEEeCCCCCCcEEEEeeccccCCCC--C
Confidence 6789999999999999999999999999999999987632 378999999654 348999999999999865 3
Q ss_pred CccccCCCCeeecCcc-------hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchHHHHHHcCCCCccceeeE
Q 013442 125 WEHKSKVPGKMHACGH-------DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFG 196 (443)
Q Consensus 125 w~~~~~~~g~l~GrG~-------kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~~~~~g~~~~~d~~i~ 196 (443)
|. ..+++|++||||+ |++++++|++++.|++.+ .++++|.|+|++||| ++.|++.+.+.+. ..++.+.
T Consensus 80 ~~-~~~~~~~~~g~G~~~~g~D~k~g~a~~l~~~~~l~~~~-~~~~~v~~~~~~~EE~g~~G~~~~~~~~~--~~~~~~~ 155 (361)
T TIGR01883 80 PE-PVVEDGIFTSLGGTILGADDKAGVAAMLEAMDVLSTEE-TPHGTIEFIFTVKEELGLIGMRLFDESKI--TAAYGYC 155 (361)
T ss_pred CC-ceecCCeEecCCCeEeeccccHHHHHHHHHHHHHHhcC-CCCCCEEEEEEcccccCchhHhHhChhhc--CcceeEE
Confidence 43 2456799999994 599999999999998865 578899999999999 6679988865432 2355554
Q ss_pred ecCCCCCCCceEEeecCcccccceEEEEEEEecCCCCC-CCCCCCcHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEE
Q 013442 197 LHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAA-IPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFE 275 (443)
Q Consensus 197 ~~~~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss-~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~ 275 (443)
.+ ++.+.+.+.+ +++|..+++++++|+++|++ .|+.|+||+..+++++.+|+... .....++|++.++
T Consensus 156 ~~--~~~~~~~i~~----~~~g~~~~~i~~~G~~~Ha~~~p~~g~nAi~~~~~~i~~l~~~~-----~~~~~~~~i~~i~ 224 (361)
T TIGR01883 156 LD--APGEVGNIQL----AAPTQVKVDATIAGKDAHAGLVPEDGISAISVARMAIHAMRLGR-----IDEETTANIGSFS 224 (361)
T ss_pred Ee--CCCCcceEEe----cCCceEEEEEEEEeeecCCCCCcccCcCHHHHHHHHHHhccccC-----CCCccccccceee
Confidence 33 2223344432 34799999999999999986 79999999999999999886431 1123578999999
Q ss_pred cCCcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcc--cCCHHHHHHHHHHHHHh
Q 013442 276 GGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVT--VNNKNLHEHFQKVAADM 353 (443)
Q Consensus 276 gG~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~d~~~~~~~~~~~~~~ 353 (443)
||...|+||++|++.+|+|+.|..+.+.+.++|++.++..+...++++++++ ...++++ +.|+++++.+++++++.
T Consensus 225 gG~~~nvVP~~~~~~~diR~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~lv~~l~~a~~~~ 302 (361)
T TIGR01883 225 GGVNTNIVQDEQLIVAEARSLSFRKAEAQVQTMRERFEQAAEKYGATLEEET--RLIYEGFKIHPQHPLMNIFKKAAKKI 302 (361)
T ss_pred cCCccCccCCceEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEE--EeccccccCCCCCHHHHHHHHHHHHc
Confidence 9999999999999999999999999999999999999987777788777765 3344444 45678999999999885
Q ss_pred cCCcccccCCCCCCCchHHHHHhh-cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHH
Q 013442 354 LGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLA 421 (443)
Q Consensus 354 ~g~~~~~~~~~~~g~tDa~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~ 421 (443)
|.++. ...++|++|+++|... +|+++++ ||. ..+|++||+++++++.+++++|..++
T Consensus 303 -g~~~~--~~~~~g~tD~~~~~~~giP~v~~G-------~g~-~~~Hs~~E~v~i~~~~~~~~~~~~~~ 360 (361)
T TIGR01883 303 -GLKTS--EIFSGGGSDANVLNEKGVPTVNLS-------AGY-VHAHTEKETISIEQLVKLAELVIALA 360 (361)
T ss_pred -CCCcE--EEecCcccHHHHHhhCCCceEEEC-------CCc-ccCcCcceeEEHHHHHHHHHHHHHHh
Confidence 87653 2457889999999876 9987654 444 46999999999999999999999875
No 38
>PRK07906 hypothetical protein; Provisional
Probab=100.00 E-value=8.2e-48 Score=390.55 Aligned_cols=353 Identities=16% Similarity=0.173 Sum_probs=266.6
Q ss_pred HHHHHHHHhCCCCC------cccHHHHHHHHHHHHhCCCCeeec---ccCceEEEEECCC-C-CcEEEEEEecccccCcc
Q 013442 53 VNIRRKIHENPELG------FQEFETSKLIRAELDQMGIPYKFP---VAVTGVVGYIGTG-Q-PPFVALRADMDALAMEE 121 (443)
Q Consensus 53 i~ll~~l~~ipS~s------~~E~~~~~~l~~~l~~~G~~~~~~---~~~~~via~~~~~-~-~~~I~~~~H~DtVp~~~ 121 (443)
++++++|++|||++ ++|.++++||.++|+++||+++.. .+++|+++++++. + .|+|+|+||+||||+++
T Consensus 2 ~~ll~~Lv~i~S~s~~~~~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nv~~~~~g~~~~~~~lll~~H~DtVp~~~ 81 (426)
T PRK07906 2 VDLCSELIRIDTTNTGDGTGKGEREAAEYVAEKLAEVGLEPTYLESAPGRANVVARLPGADPSRPALLVHGHLDVVPAEA 81 (426)
T ss_pred hHHHHHHhcccccCCCCCCCchHHHHHHHHHHHHHhCCCCeEEeecCCCceEEEEEEeCCCCCCCcEEEEcccccCCCCc
Confidence 67899999999999 678999999999999999998763 2567999999653 3 48999999999999976
Q ss_pred cCCCccc----cCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-cc-chHHHHHHcC--CCCc
Q 013442 122 SVEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG-GGAKKMLDAG--ALEN 190 (443)
Q Consensus 122 ~~~w~~~----~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~-~G~~~~~~~g--~~~~ 190 (443)
. +|+++ .++||++||||+ |++++++|+|+++|++.+..++++|.|+|++||| ++ .|++.++++. .+..
T Consensus 82 ~-~W~~~Pf~~~~~dg~iyGrG~~D~Kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~~g~~~l~~~~~~~~~~ 160 (426)
T PRK07906 82 A-DWSVHPFSGEIRDGYVWGRGAVDMKDMDAMMLAVVRHLARTGRRPPRDLVFAFVADEEAGGTYGAHWLVDNHPELFEG 160 (426)
T ss_pred c-cCccCCCCceeeCCEEEecCccccchHHHHHHHHHHHHHHcCCCCCccEEEEEecCcccchhhhHHHHHHHHHHhccc
Confidence 4 79754 467899999997 8999999999999999888899999999999999 44 5999998753 2233
Q ss_pred cceeeEecCCCC---CCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHHhhccc-------
Q 013442 191 VEAIFGLHVSSL---FPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSRE------- 260 (443)
Q Consensus 191 ~d~~i~~~~~~~---~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~~~~~~------- 260 (443)
.+++++ ++... .+..........+++|..+++|+++|+++|+|+|+. .||+..+++++.+|+++..+.
T Consensus 161 ~~~ii~-e~~~~~~~~~~~~~~~~i~~~~kG~~~~~v~v~G~~~Hss~p~~-~nAi~~~~~~l~~l~~~~~~~~~~~~~~ 238 (426)
T PRK07906 161 VTEAIS-EVGGFSLTVPGRDRLYLIETAEKGLAWMRLTARGRAGHGSMVND-DNAVTRLAEAVARIGRHRWPLVLTPTVR 238 (426)
T ss_pred hheEEE-CCCceeeccCCCccEEEEEeccceEEEEEEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHhCCCCcccCHHHH
Confidence 344443 22110 111101112345678999999999999999999974 999999999999997542110
Q ss_pred -------------cCCC-------------------CCceEEEEEEEcCCcCccccCcEEEEEEEecCChHHHHHHHHHH
Q 013442 261 -------------ADPL-------------------DSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRI 308 (443)
Q Consensus 261 -------------~~~~-------------------~~~t~~v~~i~gG~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i 308 (443)
.++. ..+|+|++.|+||.+.|+||++|++.+|+|++|+.+ +++.++|
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~i~gG~~~NviP~~~~~~~d~R~~p~~~-~~i~~~i 317 (426)
T PRK07906 239 AFLDGVAELTGLEFDPDDPDALLAKLGPAARMVGATLRNTANPTMLKAGYKVNVIPGTAEAVVDGRFLPGRE-EEFLATV 317 (426)
T ss_pred HHHHHhhhhcCcccCcccHHHHHHHHhhcCcchhhhhcccccceeEeccCccccCCCceEEEEEEeECCCCc-HHHHHHH
Confidence 0000 135999999999999999999999999999999886 5566666
Q ss_pred HHHHHHHHHhhCCeEEEEeeccCCCCcc--cCCHHHHHHHHHHHHHhcCC-cccccCCCCCCCchHHHHHhh-cCcEEEE
Q 013442 309 EEVVMKQASVQRCNATVTFDDKSFYPVT--VNNKNLHEHFQKVAADMLGV-QNIKENRPLMGTEDFSFFAEA-IPGYFYY 384 (443)
Q Consensus 309 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~d~~~~~~~~~~~~~~~g~-~~~~~~~~~~g~tDa~~~~~~-ip~~~~~ 384 (443)
++.+. ..+++++. ..++++ +.|+++++.+++++++.++. .+ .+....|+||+++|... +|++.
T Consensus 318 ~~~~~-------~~v~~~~~--~~~~~~~~~~~~~~v~~l~~a~~~~~~~~~~--~~~~~~ggtDa~~~~~~g~p~~~-- 384 (426)
T PRK07906 318 DELLG-------PDVEREWV--HRDPALETPFDGPLVDAMNAALLAEDPGARV--VPYMLSGGTDAKAFSRLGIRCYG-- 384 (426)
T ss_pred HHHhC-------CCeEEEEe--cCCCCCCCCCCcHHHHHHHHHHHHHCCCCeE--eeeeecccCcHHHHHhcCCceEE--
Confidence 66542 23455442 223333 56788999999999987532 22 22346678999999876 78654
Q ss_pred ecCCCCCCCC---CCCCCCCCCCCCCCchHHHHHHHHHHHHH
Q 013442 385 LGMNDETKGK---FETGHSPYFRVNEDALPYGAALHASLATR 423 (443)
Q Consensus 385 ~G~~~~~pG~---~~~~H~p~E~i~i~~l~~~~~~~a~~~~~ 423 (443)
||+..- |+. ...+|++|||++++++.+++++|+.++.+
T Consensus 385 ~gp~~~-~~~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~ 425 (426)
T PRK07906 385 FAPLRL-PPDLDFAALFHGVDERVPVDALRFGVRVLDRFLRT 425 (426)
T ss_pred Eecccc-CccccccccCcCCCCceeHHHHHHHHHHHHHHHHh
Confidence 453210 111 25799999999999999999999998865
No 39
>PRK08737 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=1.6e-47 Score=379.23 Aligned_cols=333 Identities=16% Similarity=0.148 Sum_probs=257.0
Q ss_pred HHHHHHHHHHHhCCCCCc----ccHHHHHHHHHHHHhCCCCeeec---ccCceEEEEECCCCCcEEEEEEecccccCccc
Q 013442 50 YWMVNIRRKIHENPELGF----QEFETSKLIRAELDQMGIPYKFP---VAVTGVVGYIGTGQPPFVALRADMDALAMEES 122 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~----~E~~~~~~l~~~l~~~G~~~~~~---~~~~~via~~~~~~~~~I~~~~H~DtVp~~~~ 122 (443)
+++++++++|++|||.++ +|.++++||.++|+ |+++++. .+++|+++..+ +|+|+|+||+||||+++
T Consensus 6 ~~~~~~l~~Lv~i~s~~~~~~~~e~~~~~~l~~~l~--g~~~~~~~~~~~~~nli~~~g---~~~lll~gH~DtVp~~~- 79 (364)
T PRK08737 6 ESTLDHLQALVSFDTRNPPRAITTGGIFDYLRAQLP--GFQVEVIDHGAGAVSLYAVRG---TPKYLFNVHLDTVPDSP- 79 (364)
T ss_pred HHHHHHHHHHhCCCCcCCCCCCCcHHHHHHHHHHhC--CCEEEEecCCCCceEEEEEcC---CCeEEEEeeeCCCCCCC-
Confidence 678999999999999963 47899999999997 9987763 24568998642 37899999999999975
Q ss_pred CCCccc----cCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-cc-chHHHHHHcCCCCccce
Q 013442 123 VEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG-GGAKKMLDAGALENVEA 193 (443)
Q Consensus 123 ~~w~~~----~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~-~G~~~~~~~g~~~~~d~ 193 (443)
.|+++ .++||+|||||+ ||+++++++|++. +.++|.|+|++||| ++ .|++.+++++. +.|+
T Consensus 80 -~w~~~Pf~~~~~~g~lyGrGa~DmKg~~aa~l~a~~~-------~~~~v~~~~~~dEE~g~~~g~~~~~~~~~--~~~~ 149 (364)
T PRK08737 80 -HWSADPHVMRRTDDRVIGLGVCDIKGAAAALLAAANA-------GDGDAAFLFSSDEEANDPRCVAAFLARGI--PYEA 149 (364)
T ss_pred -CCCCCCCceEEECCEEEEECcccchHHHHHHHHHHHc-------cCCCEEEEEEcccccCchhhHHHHHHhCC--CCCE
Confidence 68654 567899999998 8999999999864 35689999999999 65 68899988764 4677
Q ss_pred eeEecCCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCC-CCCCcHHHHHHHHHHHHHHhhccc----cCCCCCce
Q 013442 194 IFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIP-QHTIDPIVAASNVIVSLQHLVSRE----ADPLDSQV 268 (443)
Q Consensus 194 ~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss~p-~~g~NAi~~~~~~i~~l~~~~~~~----~~~~~~~t 268 (443)
+++.+ |++.. ...+++|..+++|+++|+++|+|.| +.|+|||..+++++.++.+..... .......+
T Consensus 150 ~iv~E-----pt~~~---~~~~~kG~~~~~v~v~Gk~aHas~p~~~G~NAI~~~~~~l~~~~~~~~~~~~~~~~~~~~~t 221 (364)
T PRK08737 150 VLVAE-----PTMSE---AVLAHRGISSVLMRFAGRAGHASGKQDPSASALHQAMRWGGQALDHVESLAHARFGGLTGLR 221 (364)
T ss_pred EEEcC-----CCCce---eEEecceeEEEEEEEEeeccccCCCcccCCCHHHHHHHHHHHHHHHHHhhhhhccCCCCCCc
Confidence 77643 44321 2246789999999999999999998 599999999999998876543211 11233569
Q ss_pred EEEEEEEcCCcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcccCC-HHHHHHH-
Q 013442 269 LTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNN-KNLHEHF- 346 (443)
Q Consensus 269 ~~v~~i~gG~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d-~~~~~~~- 346 (443)
+|++.|+||.+.|+||++|++.+|+|+.|+.+.+++.++|++.++. ...++++.+. ...+++...+ .+++..+
T Consensus 222 ~~vg~i~GG~~~NvVP~~a~~~~d~R~~p~~~~e~v~~~i~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 296 (364)
T PRK08737 222 FNIGRVEGGIKANMIAPAAELRFGFRPLPSMDVDGLLATFAGFAEP----AAATFEETFR-GPSLPSGDIARAEERRLAA 296 (364)
T ss_pred eEEeeEecCCCCCcCCCceEEEEEeeeCCCCCHHHHHHHHHHHHHH----cCCceEEEec-cCCCCCcccCcchHHHHHH
Confidence 9999999999999999999999999999999999999999877653 1233444331 2344444322 2455444
Q ss_pred HHHHHHhcCCcccccCCCCCCCchHHHHHhh-cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHH
Q 013442 347 QKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (443)
Q Consensus 347 ~~~~~~~~g~~~~~~~~~~~g~tDa~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~ 422 (443)
+++.++. |.+. ....+++||+++|... +|++++ | ||+...+|++||||+++++.+++++|.+++.
T Consensus 297 ~~~~~~~-~~~~---~~~~~~~tDa~~~~~~Gip~v~~--G-----pG~~~~aHt~dE~i~i~~l~~~~~~~~~~~~ 362 (364)
T PRK08737 297 RDVADAL-DLPI---GNAVDFWTEASLFSAAGYTALVY--G-----PGDIAQAHTADEFVTLDQLQRYAESVHRIIN 362 (364)
T ss_pred HHHHhhh-cCCC---CceeccccCHHHHHHcCCCEEEE--C-----CCChhhccCCCcceeHHHHHHHHHHHHHHhc
Confidence 4444443 6543 1235668999999877 998764 5 6666779999999999999999999998875
No 40
>PRK07079 hypothetical protein; Provisional
Probab=100.00 E-value=4.8e-47 Score=388.88 Aligned_cols=372 Identities=13% Similarity=0.065 Sum_probs=278.9
Q ss_pred hHHHHhhcCchhHHHHHHHHHHHHhCCCCCcc---cHHHHHHHH----HHHHhCCCCeeec-----ccCceEEEEECCC-
Q 013442 37 VKFLDFAKKPEIFYWMVNIRRKIHENPELGFQ---EFETSKLIR----AELDQMGIPYKFP-----VAVTGVVGYIGTG- 103 (443)
Q Consensus 37 ~~~~~~~~~~~~~~~~i~ll~~l~~ipS~s~~---E~~~~~~l~----~~l~~~G~~~~~~-----~~~~~via~~~~~- 103 (443)
+++.++++. +++++++++|++|||+|++ +.++++|++ ++|+++||+++.. .+++|+++.++++
T Consensus 8 ~~~~~~~~~----~~~~~~L~~LV~ipSvs~~~~~~~~~~~~l~~~~~~~l~~~G~~~~~~~~~~~~~~~~vva~~~~~~ 83 (469)
T PRK07079 8 ARAAAYFDS----GAFFADLARRVAYRTESQNPDRAPALRAYLTDEIAPALAALGFTCRIVDNPVAGGGPFLIAERIEDD 83 (469)
T ss_pred HHHHHhhcc----HHHHHHHHHHhccCCCCCCcccHHHHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCEEEEEeCCCC
Confidence 345555553 5699999999999999974 346777764 5899999998752 2468999998654
Q ss_pred CCcEEEEEEecccccCcccCCCcc--c----cCCCCeeecCcc---hHHHHHHHHHHHHHHcc-cccCCceEEEEEeccC
Q 013442 104 QPPFVALRADMDALAMEESVEWEH--K----SKVPGKMHACGH---DAHVAMLLGAAKMLQVF-RHEIKGTIVLVFQPAE 173 (443)
Q Consensus 104 ~~~~I~~~~H~DtVp~~~~~~w~~--~----~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~-~~~l~~~i~~i~~~dE 173 (443)
++|+|+|+||+||||+++ ..|+. + .++||++||||+ ||+++++++|+++|++. +..++++|.|++++||
T Consensus 84 ~~~~lll~gH~DvVp~~~-~~W~~~~~Pf~~~~~dg~lyGRGa~DmKgg~aa~l~A~~~l~~~~~~~~~~~i~~~~~~dE 162 (469)
T PRK07079 84 ALPTVLIYGHGDVVRGYD-EQWREGLSPWTLTEEGDRWYGRGTADNKGQHTINLAALEQVLAARGGRLGFNVKLLIEMGE 162 (469)
T ss_pred CCCEEEEEcccCCCCCCh-HHhcccCCCCcccccCCEEEEEeccCCcHHHHHHHHHHHHHHHhcCCCCCCCEEEEEECcc
Confidence 458999999999999764 56862 3 578999999998 89999999999998653 4688999999999999
Q ss_pred C-ccchHHHHHHcCC-CCccceeeEecCCCCCCCceEEeecCcccccceEEEEEEEec--CCCCCCC-CCCCcHHHHHHH
Q 013442 174 E-GGGGAKKMLDAGA-LENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGK--GGHAAIP-QHTIDPIVAASN 248 (443)
Q Consensus 174 E-g~~G~~~~~~~g~-~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~--~aHss~p-~~g~NAi~~~~~ 248 (443)
| |+.|+++++++.. .-..|++|+.++....+.. .. ...+++|..+++|+++|+ +.||+.+ ..+.||+..+++
T Consensus 163 E~g~~G~~~l~~~~~~~~~~d~~iv~e~~~~~~~~-~~--i~~g~kG~~~~~v~v~G~~~~~hs~~~~g~~~nai~~l~~ 239 (469)
T PRK07079 163 EIGSPGLAEVCRQHREALAADVLIASDGPRLSAER-PT--LFLGSRGAVNFRLRVNLRDGAHHSGNWGGLLRNPGTVLAH 239 (469)
T ss_pred ccCCccHHHHHHHhHHhcCCCEEEEeCCCccCCCC-eE--EEEecceEEEEEEEEeeCCCCCCCCccccccCCHHHHHHH
Confidence 9 7799999998753 1246888876543211111 11 224578999999999998 4466632 234699999999
Q ss_pred HHHHHHHhhccc------------------------c--------------------CCCCCceEEEEEEEcCC---cCc
Q 013442 249 VIVSLQHLVSRE------------------------A--------------------DPLDSQVLTVAKFEGGG---AFN 281 (443)
Q Consensus 249 ~i~~l~~~~~~~------------------------~--------------------~~~~~~t~~v~~i~gG~---~~n 281 (443)
++.++.+...+. . ......|+|++.|+||. ..|
T Consensus 240 ai~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~nv~~i~gG~~~~~~N 319 (469)
T PRK07079 240 AIASLVDARGRIQVPGLRPPPLPAAVRAALADITVGGGPGDPAIDPDWGEPGLTPAERVFGWNTLEVLAFKTGNPDAPVN 319 (469)
T ss_pred HHHHhCCCCCCEecCCccCCCCCHHHHHHHHhCCCchhhhccCcccccCCCCcCHHHHHhhCCceEEEeeecCCCCCcce
Confidence 999985421000 0 00123589999999994 689
Q ss_pred cccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcc--cCCHHHHHHHHHHHHHhcCCccc
Q 013442 282 IIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVT--VNNKNLHEHFQKVAADMLGVQNI 359 (443)
Q Consensus 282 ~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~d~~~~~~~~~~~~~~~g~~~~ 359 (443)
+||++|++++|+|++|+++.+++.++|+++++.... .++++++ ...++++ +.++++++.+.+++++.+|.++.
T Consensus 320 vVP~~a~~~vdiR~~P~~~~e~v~~~l~~~i~~~~~---~~v~~~~--~~~~~p~~~~~~~~~v~~l~~a~~~~~g~~~~ 394 (469)
T PRK07079 320 AIPGSARAVCQLRFVVGTDWENLAPHLRAHLDAHGF---PMVEVTV--ERGSPATRLDPDDPWVRWALASIARTTGKKPA 394 (469)
T ss_pred EecCceEEEEEEEcCCCCCHHHHHHHHHHHHHhcCC---CCeEEEE--eCCCCceecCCCCHHHHHHHHHHHHHhCCCCc
Confidence 999999999999999999999999999999886321 1355554 3344443 56788999999999988787653
Q ss_pred ccCCCCCCCchHHHHHh-h-cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhhc
Q 013442 360 KENRPLMGTEDFSFFAE-A-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLLEN 428 (443)
Q Consensus 360 ~~~~~~~g~tDa~~~~~-~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~~~~ 428 (443)
.. ...+|++|+++|.. . +|+++ +|+.+ ||. .+|++||||+++++.+++++|++++.++++..
T Consensus 395 ~~-~~~~g~~d~~~~~~~~giP~v~--~g~~~--~~~--~~H~~dE~v~l~~l~~~~~~~~~~~~~~~~~~ 458 (469)
T PRK07079 395 LL-PNLGGSLPNDVFADILGLPTLW--VPHSY--PAC--SQHAPNEHLLASVAREGLQIMAGLFWDLGEQG 458 (469)
T ss_pred ee-cCCCcchhHHHHHHHhCCCEEE--ecCCC--CCc--cCcCCCCCCCHHHHHHHHHHHHHHHHHHhccC
Confidence 22 23566779888875 4 89774 34333 332 47999999999999999999999999998643
No 41
>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism]
Probab=100.00 E-value=8.5e-47 Score=381.24 Aligned_cols=365 Identities=22% Similarity=0.280 Sum_probs=285.1
Q ss_pred HHHHHHHHHHHhCCCCC-cccHHHHHHHHHHHHhCCCCeeecc-----cCceEEEEECCCCC-cEEEEEEecccccCccc
Q 013442 50 YWMVNIRRKIHENPELG-FQEFETSKLIRAELDQMGIPYKFPV-----AVTGVVGYIGTGQP-PFVALRADMDALAMEES 122 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s-~~E~~~~~~l~~~l~~~G~~~~~~~-----~~~~via~~~~~~~-~~I~~~~H~DtVp~~~~ 122 (443)
++++++++++++|||+| ..+.++++|+.++|+++|+.++... +.+|++++++++++ |+|+|+||+||||+++.
T Consensus 13 ~~~~~~l~~lv~~~s~s~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~n~~~~~~~~~~~~~l~l~~H~DvVP~g~~ 92 (409)
T COG0624 13 DDILELLKELVRIPSVSAGEEAEAAELLAEWLEELGFEVEEDEVGPGPGRPNLVARLGGGDGGPTLLLGGHLDVVPAGGG 92 (409)
T ss_pred HHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHcCCceEEeecCCCCCceEEEEEecCCCCCCeEEEeccccccCCCCc
Confidence 77889999999999999 8899999999999999999977632 24599999987654 99999999999999998
Q ss_pred CCCccc----cCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchHHHHHHcCCC---Ccc
Q 013442 123 VEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGAL---ENV 191 (443)
Q Consensus 123 ~~w~~~----~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~~~~~g~~---~~~ 191 (443)
..|+++ +++||+|||||+ ||+++++++|++.+.+.+..++++|.+++++||| ++.|...++.++.. ..+
T Consensus 93 ~~W~~~Pf~~~~~dg~lyGRG~~D~KG~~~a~l~A~~~l~~~~~~~~~~v~~~~~~dEE~g~~~~~~~~~~~~~~~~~~~ 172 (409)
T COG0624 93 EDWTTDPFEPTIKDGKLYGRGAADMKGGLAAALYALSALKAAGGELPGDVRLLFTADEESGGAGGKAYLEEGEEALGIRP 172 (409)
T ss_pred ccCccCCCccEEECCEEEecCccccchHHHHHHHHHHHHHHhCCCCCeEEEEEEEeccccCCcchHHHHHhcchhhccCC
Confidence 889653 566799999998 8999999999999999888999999999999999 66788888776542 356
Q ss_pred ceeeEecCCCCCCCceEEeecCcccccceEEEEEEEecCCCCCC--CCCCCcHHHHHHHHHHHHHHhhccccC-CCC-Cc
Q 013442 192 EAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAI--PQHTIDPIVAASNVIVSLQHLVSREAD-PLD-SQ 267 (443)
Q Consensus 192 d~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss~--p~~g~NAi~~~~~~i~~l~~~~~~~~~-~~~-~~ 267 (443)
|+.+..++....+.+..... +++|..+++|+++|+++|+|. |+.|.|++..+...+.++.....+... ... ..
T Consensus 173 d~~i~~E~~~~~~~~~~~~~---~~kG~~~~~v~v~G~~~Has~~~p~~~~n~i~~a~~~~~~~~~~~~~~~~~~~~~~~ 249 (409)
T COG0624 173 DYEIVGEPTLESEGGDIIVV---GHKGSLWLEVTVKGKAGHASTTPPDLGRNPIHAAIEALAELIEELGDLAGEGFDGPL 249 (409)
T ss_pred CEEEeCCCCCcccCCCeEEE---cceeEEEEEEEEEeecccccccCCcccccHHHHHHHHHHHHHHHhcccccccccCCc
Confidence 77776554110122222222 568999999999999999997 999999554444444444333222211 122 46
Q ss_pred eEEEEEEEcCCc--------CccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcccCC
Q 013442 268 VLTVAKFEGGGA--------FNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNN 339 (443)
Q Consensus 268 t~~v~~i~gG~~--------~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d 339 (443)
+++++.+.+|.. .|+||++|++.+|+|+.|..+.+++.++|++.++..+...++++++.........+.+.+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~nviP~~~~~~~d~R~~p~~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (409)
T COG0624 250 GLNVGLILAGPGASVNGGDKVNVIPGEAEATVDIRLLPGEDLDDVLEELEAELRAIAPKEGVEYEIEPGLGEPPLPVPGD 329 (409)
T ss_pred cccccccccCCcccccCCccCceecceEEEEEEEecCCcCCHHHHHHHHHHHHHHhccccCceEEeccccCCccccCCCc
Confidence 777777666654 599999999999999999999999999999999876554466666653112233345667
Q ss_pred HHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhh-cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHH
Q 013442 340 KNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHA 418 (443)
Q Consensus 340 ~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a 418 (443)
+++++.+.+++++.+|.+. .....++++|+.+++.. +| + ..|| ||....+|+||||++++++.+++++|+
T Consensus 330 ~~~v~~l~~~~~~~~g~~~--~~~~~G~~~da~~~~~~~~~-~-~~fg-----p~~~~~~H~~~E~v~i~~l~~~~~~~~ 400 (409)
T COG0624 330 SPLVAALAEAAEELLGLPP--EVSTGGGTHDARFFARLGIP-A-VIFG-----PGDIGLAHQPNEYVELEDLVKGAKVLA 400 (409)
T ss_pred hHHHHHHHHHHHHhhCCCc--eecCCCCcchHHHHHhcCCe-e-EEEC-----CCCcccccCCCceeeHHHHHHHHHHHH
Confidence 8999999999998778763 23345577999999888 67 3 3467 666678999999999999999999999
Q ss_pred HHHHHHHh
Q 013442 419 SLATRYLL 426 (443)
Q Consensus 419 ~~~~~l~~ 426 (443)
+++.+++.
T Consensus 401 ~~l~~l~~ 408 (409)
T COG0624 401 RLLYELAE 408 (409)
T ss_pred HHHHHHhc
Confidence 99999874
No 42
>PRK13381 peptidase T; Provisional
Probab=100.00 E-value=2.2e-46 Score=377.43 Aligned_cols=347 Identities=18% Similarity=0.181 Sum_probs=273.2
Q ss_pred HHHHHHHHHhCCCCCc----------ccHHHHHHHHHHHHhCCCCeeecccCceEEEEECCC-CC-cEEEEEEecccccC
Q 013442 52 MVNIRRKIHENPELGF----------QEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG-QP-PFVALRADMDALAM 119 (443)
Q Consensus 52 ~i~ll~~l~~ipS~s~----------~E~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~-~~-~~I~~~~H~DtVp~ 119 (443)
+++.++++++|||.|. ++.++++||.++|+++|++....++.+|++++++++ ++ |+|+|+||+||||+
T Consensus 3 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~nvi~~~~g~~~~~~~lll~~H~D~Vp~ 82 (404)
T PRK13381 3 LTDRFFRYLKVNSQSDAASGTLPSTPGQHELAKLLADELRELGLEDIVIDEHAIVTAKLPGNTPGAPRIGFIAHLDTVDV 82 (404)
T ss_pred HHHHhHhhEEEeccCCCCCCCCcCChhHHHHHHHHHHHHHHcCCCcEEEcCCeEEEEEEecCCCCCCeEEEEEEecCCCc
Confidence 6788999999999997 468899999999999999644445678999999654 44 89999999999998
Q ss_pred cccC--C-----Ccc------------------c----cCCCCeeecCcc-------hHHHHHHHHHHHHHHcccccCCc
Q 013442 120 EESV--E-----WEH------------------K----SKVPGKMHACGH-------DAHVAMLLGAAKMLQVFRHEIKG 163 (443)
Q Consensus 120 ~~~~--~-----w~~------------------~----~~~~g~l~GrG~-------kg~~a~~l~a~~~l~~~~~~l~~ 163 (443)
+... . |.. + ...+|++||||+ ||+++++++|+++|++.+ .+.+
T Consensus 83 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GrG~~~~g~DmKgg~aa~l~a~~~l~~~~-~~~g 161 (404)
T PRK13381 83 GLSPDIHPQILRFDGGDLCLNAEQGIWLRTAEHPELLNYQGEDIIFSDGTSVLGADNKAAIAVVMTLLENLTENE-VEHG 161 (404)
T ss_pred cCCCCcCcEEEecCCCceecCCccceeechHhChhHHhccCCcEEeCCCccccccccHHHHHHHHHHHHHHHhcC-CCCC
Confidence 7631 1 210 0 135778999995 899999999999998875 5688
Q ss_pred eEEEEEeccCC-ccchHHHHHHcCCCCccceeeEecCCCCCCCceEEeecCcccccceEEEEEEEecCCCCC-CCCCCCc
Q 013442 164 TIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAA-IPQHTID 241 (443)
Q Consensus 164 ~i~~i~~~dEE-g~~G~~~~~~~g~~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss-~p~~g~N 241 (443)
+|.|+|++||| ++.|+++++.++. ..|++++.|. +++ +.+. ..++|..+++|+++|+++|++ .|+.|.|
T Consensus 162 ~i~~~~~~dEE~g~~G~~~~~~~~~--~~d~~~~~~~--~~~-~~i~----~~~~G~~~~~v~v~Gk~aHa~~~p~~g~N 232 (404)
T PRK13381 162 DIVVAFVPDEEIGLRGAKALDLARF--PVDFAYTIDC--CEL-GEVV----YENFNAASAEITITGVTAHPMSAKGVLVN 232 (404)
T ss_pred CEEEEEEcccccccccHHHHHHhcC--CCCEEEEecC--CCc-ceEE----EecCcceEEEEEEEeEecCCCCCcccCcC
Confidence 99999999999 6689999977643 3677776653 334 3332 235799999999999999988 5999999
Q ss_pred HHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEcCCcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhC-
Q 013442 242 PIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQR- 320 (443)
Q Consensus 242 Ai~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gG~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~- 320 (443)
||..+++++.+|+++..+........+++++.++|+ |++|++.+|+|+.|..+.+.+.++|++.+++.+...+
T Consensus 233 AI~~a~~~i~~l~~~~~~~~~~~~~~~i~v~~i~g~------p~~~~~~~diR~~~~~~~e~i~~~i~~~~~~~~~~~~~ 306 (404)
T PRK13381 233 PILMANDFISHFPRQETPEHTEGREGYIWVNDLQGN------VNKAKLKLIIRDFDLDGFEARKQFIEEVVAKINAKYPT 306 (404)
T ss_pred HHHHHHHHHHhCCccCCCCCCCCcccEEEEEeEEeC------cceEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999876433222223346888887764 8999999999999999999999999999998877666
Q ss_pred CeEEEEeeccCCCC--cccCCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhh-cCcEEEEecCCCCCCCCCCC
Q 013442 321 CNATVTFDDKSFYP--VTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFET 397 (443)
Q Consensus 321 ~~~~v~~~~~~~~~--~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~~~~~-ip~~~~~~G~~~~~pG~~~~ 397 (443)
+++++++......+ ....++++++.+++++++. |.++. ...+.|++|+++|... +|+++++ ||. ..
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~lv~~l~~a~~~~-g~~~~--~~~~~g~tDa~~~~~~giP~v~~G-------pG~-~~ 375 (404)
T PRK13381 307 ARVSLTLTDQYSNISNSIKDDRRAVDLAFDAMKEL-GIEPK--VIPMRGGTDGAALSAKGLPTPNLF-------TGA-HN 375 (404)
T ss_pred cEEEEEEEeCCchhhcccccCHHHHHHHHHHHHHc-CCCee--eccCCccchHHHHhcCCCCeEEEC-------ccc-cC
Confidence 56666542111212 2456789999999998875 77653 3357789999999876 9988765 333 34
Q ss_pred CCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 013442 398 GHSPYFRVNEDALPYGAALHASLATRYL 425 (443)
Q Consensus 398 ~H~p~E~i~i~~l~~~~~~~a~~~~~l~ 425 (443)
+|++|||++++++.+++++|+.++..+.
T Consensus 376 aH~~dE~v~i~~l~~~~~v~~~~~~~~~ 403 (404)
T PRK13381 376 FHSRFEFLPVSSFVKSYEVTITICLLAA 403 (404)
T ss_pred CcCcceeEEHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999998775
No 43
>PRK07318 dipeptidase PepV; Reviewed
Probab=100.00 E-value=1.5e-46 Score=384.78 Aligned_cols=360 Identities=14% Similarity=0.138 Sum_probs=271.6
Q ss_pred HHHHhhcCchhHHHHHHHHHHHHhCCCCCcc------------cHHHHHHHHHHHHhCCCCeeecccCceEEEEEC-CCC
Q 013442 38 KFLDFAKKPEIFYWMVNIRRKIHENPELGFQ------------EFETSKLIRAELDQMGIPYKFPVAVTGVVGYIG-TGQ 104 (443)
Q Consensus 38 ~~~~~~~~~~~~~~~i~ll~~l~~ipS~s~~------------E~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~-~~~ 104 (443)
++.+++++++ +++++++++|++|||++++ +.++++|+.++|+++||+++..+ |+++++. ++.
T Consensus 4 ~~~~~~~~~~--~~~~~~l~~lv~i~S~~~~~~~~~~~p~~~~~~~~~~~l~~~~~~~G~~~~~~~---n~~~~~~~~~~ 78 (466)
T PRK07318 4 DWKKEVEKRK--DDLIEDLQELLRINSVRDDSKAKEGAPFGPGPVKALEKFLEIAERDGFKTKNVD---NYAGHIEYGEG 78 (466)
T ss_pred hHHHHHHHhH--HHHHHHHHHHhccCcccCCcccccCCCCCccHHHHHHHHHHHHHHCCCEEEEec---CccceEEECCC
Confidence 4667777777 8999999999999999965 46799999999999999987542 5555543 233
Q ss_pred CcEEEEEEecccccCcccCCCccc----cCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-cc
Q 013442 105 PPFVALRADMDALAMEESVEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG 176 (443)
Q Consensus 105 ~~~I~~~~H~DtVp~~~~~~w~~~----~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~ 176 (443)
.|+|+|+||+||||+++ +|+++ .++||+|||||+ ||+++++++|+++|++.+..++++|.|+|++||| |+
T Consensus 79 ~~~l~l~gH~DvVp~~~--~W~~~Pf~~~~~dg~lyGRG~~DmKgg~aa~l~Al~~l~~~g~~~~~~i~l~~~~DEE~g~ 156 (466)
T PRK07318 79 EEVLGILGHLDVVPAGD--GWDTDPYEPVIKDGKIYARGTSDDKGPTMAAYYALKIIKELGLPLSKKVRFIVGTDEESGW 156 (466)
T ss_pred CCEEEEEEecCCCCCCC--CCCCCCcceEEECCEEEEcccccCcHHHHHHHHHHHHHHHcCCCCCccEEEEEEcccccCc
Confidence 48999999999999975 69644 467899999997 8999999999999999888889999999999999 77
Q ss_pred chHHHHHHcCCCCc----cce---eeEecC-----------------------CCCCCCceE------Eee---------
Q 013442 177 GGAKKMLDAGALEN----VEA---IFGLHV-----------------------SSLFPVGTV------ASR--------- 211 (443)
Q Consensus 177 ~G~~~~~~~g~~~~----~d~---~i~~~~-----------------------~~~~~~g~~------~~~--------- 211 (443)
.|+++++++..... .|. ++..++ .++.+++.+ ...
T Consensus 157 ~G~~~l~~~~~~~~~~~~~d~~~~vi~~E~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~ 236 (466)
T PRK07318 157 KCMDYYFEHEEAPDFGFSPDAEFPIINGEKGITTFDLVHFEGENEGDYVLVSFKSGLRENMVPDSAEAVITGDDLDDLIA 236 (466)
T ss_pred hhHHHHHHhCCCCCEEEEeCCCCcEEEEEeeeEEEEEEeccccCCCCceeEEEEcCccceecCcccEEEEecCCHHHHHH
Confidence 89999998643211 111 111110 001111110 000
Q ss_pred ------cCcccccc-----eEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHHh------h----c------------
Q 013442 212 ------PGPTLAAG-----GFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHL------V----S------------ 258 (443)
Q Consensus 212 ------~g~~~~g~-----~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~~------~----~------------ 258 (443)
...++||. .|++|+++|+++|+|.|+.|.|||..|++++.+|+.. . .
T Consensus 237 ~~~~~~~~~~~kG~~~~~~~~~~i~v~G~aaH~s~p~~g~NAI~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (466)
T PRK07318 237 AFEAFLAENGLKGELEEEGGKLVLTVIGKSAHGSTPEKGVNAATYLAKFLNQLNLDGDAKAFLDFAAEYLHEDTRGEKLG 316 (466)
T ss_pred HHHHHHhhcCceEEEEecCCEEEEEEEeeEcccCCCccCccHHHHHHHHHHhccCchhHHHHHHHHHHhcCCCCCcccCC
Confidence 00134554 4799999999999999999999999999999998641 0 0
Q ss_pred --cccCCCCCceEEEEEEEcCCcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCc-
Q 013442 259 --READPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPV- 335 (443)
Q Consensus 259 --~~~~~~~~~t~~v~~i~gG~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~- 335 (443)
......+..|+|++.|+||... .|++.+|+|++|+.+.+++.++|++.++. .+ ++++. ...++|
T Consensus 317 ~~~~~~~~g~~t~nvg~i~gg~~~-----~~~~~iDiR~~p~~~~~~v~~~i~~~~~~----~~--~~~~~--~~~~~p~ 383 (466)
T PRK07318 317 IAYEDDVMGDLTMNVGVFSFDEEK-----GGTLGLNFRYPVGTDFEKIKAKLEKLIGV----TG--VELSE--HEHQKPH 383 (466)
T ss_pred CcccCCCccCeEEEeeEEEEecCc-----EEEEEEEEeCCCCCCHHHHHHHHHHHHHh----cC--eEEEE--ccCCCce
Confidence 0011234579999999998542 79999999999999999999999998754 23 44443 334444
Q ss_pred -ccCCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhhcCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHH
Q 013442 336 -TVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGA 414 (443)
Q Consensus 336 -~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~~~~~ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~ 414 (443)
.+.++++++.+++++++.+|.+.. ...++|++|+++|...+ .+|+.. ||+...+|++|||++++++.+++
T Consensus 384 ~~~~d~~lv~~l~~a~~~~~g~~~~--~~~~~ggtDa~~~~~~i-----~~Gp~~--pg~~~~aH~~dE~v~i~~l~~~~ 454 (466)
T PRK07318 384 YVPKDDPLVKTLLKVYEKQTGLKGE--EQVIGGGTYARLLKRGV-----AFGAMF--PGSEDTMHQANEYIEIDDLIKAA 454 (466)
T ss_pred eeCCCCHHHHHHHHHHHHHhCCCCC--eeEEcchHhHhhCCCeE-----EeCCCC--CCCCCCCcCCCcceeHHHHHHHH
Confidence 356788999999999987787653 34568889999886422 356554 66667799999999999999999
Q ss_pred HHHHHHHHHHHh
Q 013442 415 ALHASLATRYLL 426 (443)
Q Consensus 415 ~~~a~~~~~l~~ 426 (443)
++|+.++.++++
T Consensus 455 ~v~~~~l~~~~~ 466 (466)
T PRK07318 455 AIYAEAIYELAK 466 (466)
T ss_pred HHHHHHHHHHhC
Confidence 999999999873
No 44
>PRK12892 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=9.3e-46 Score=374.10 Aligned_cols=346 Identities=18% Similarity=0.182 Sum_probs=275.3
Q ss_pred HHHHHHHHHHHhCCC---------CCcccHHHHHHHHHHHHhCCCCeeecccCceEEEEECCC-CCcEEEEEEecccccC
Q 013442 50 YWMVNIRRKIHENPE---------LGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG-QPPFVALRADMDALAM 119 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS---------~s~~E~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~-~~~~I~~~~H~DtVp~ 119 (443)
+++++++++|++|+| .+++|.++++||.++|+++||++++. .+.|+++++++. ++|+|+|+||+||||+
T Consensus 10 ~~~~~~~~~~~~~~s~~~g~~~~s~~~~e~~~~~~l~~~l~~~G~~~~~~-~~~nl~a~~~g~~~~~~l~l~gH~DtVp~ 88 (412)
T PRK12892 10 QRVLDDLMELAAIGAAKTGVHRPTYSDAHVAARRRLAAWCEAAGLAVRID-GIGNVFGRLPGPGPGPALLVGSHLDSQNL 88 (412)
T ss_pred HHHHHHHHHHHccCCCCCCeeeCCCCHHHHHHHHHHHHHHHHcCCEEEEc-CCCcEEEEecCCCCCCeEEEEccccCCCC
Confidence 678899999999876 56678999999999999999999874 456999999763 4589999999999997
Q ss_pred cccCCCccccCCCCeeecCcchHHHHHHHHHHHHHHcccccCCceEEEEEeccCCc-----c-chHHHHHHcCCC-----
Q 013442 120 EESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEG-----G-GGAKKMLDAGAL----- 188 (443)
Q Consensus 120 ~~~~~w~~~~~~~g~l~GrG~kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEEg-----~-~G~~~~~~~g~~----- 188 (443)
+ |++||+ ++++++|.|+++|++.+..++++|.|++++|||+ + .|+++++++...
T Consensus 89 ~------------g~~dg~---~Gvaa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~ 153 (412)
T PRK12892 89 G------------GRYDGA---LGVVAGLEAARALNEHGIATRHPLDVVAWCDEEGSRFTPGFLGSRAYAGRLDPADALA 153 (412)
T ss_pred C------------Ccccch---HHHHHHHHHHHHHHHcCCCCCCCeEEEEecCcccccccCccccHHHHHcCCCHHHHHh
Confidence 5 335564 5899999999999999888999999999999995 3 589988753110
Q ss_pred -----C-------------ccceeeEe-----------cCCCC---CCCceEEeecCcccccceEEEEEEEecCCCCC-C
Q 013442 189 -----E-------------NVEAIFGL-----------HVSSL---FPVGTVASRPGPTLAAGGFFEAVINGKGGHAA-I 235 (443)
Q Consensus 189 -----~-------------~~d~~i~~-----------~~~~~---~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss-~ 235 (443)
+ ..|++++. |.+.+ ++.+. ......+++|..+++|+++|+++|++ .
T Consensus 154 ~~~~~~~~~~~~~~~~~g~~~d~~~~~ep~~~~~~~e~~~~~g~~~e~~~~-~~~i~~~~kG~~~~~i~v~G~~aHa~~~ 232 (412)
T PRK12892 154 ARCRSDGVPLRDALAAAGLAGRPRPAADRARPKGYLEAHIEQGPVLEQAGL-PVGVVTGIVGIWQYRITVTGEAGHAGTT 232 (412)
T ss_pred CccCCCCcCHHHHHHHcCCChhhcccccccCccEEEEEEeccCHhHhhCCC-cEEEEEEeccceEEEEEEEEECCCCCCC
Confidence 0 01222221 11110 11121 01123467899999999999999987 5
Q ss_pred CC-CCCcHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEcC-CcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHH
Q 013442 236 PQ-HTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGG-GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVM 313 (443)
Q Consensus 236 p~-~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gG-~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~ 313 (443)
|+ .|.||+..+++++.+|+++..+.. .+.+++++.|+|| .+.|+||++|++++|+|++|.++.+++.++|++.++
T Consensus 233 p~~~g~nAi~~a~~~i~~l~~~~~~~~---~~~~~~vg~i~gg~~~~NvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~ 309 (412)
T PRK12892 233 PMALRRDAGLAAAEMIAAIDEHFPRVC---GPAVVTVGRVALDPGSPSIIPGRVEFSFDARHPSPPVLQRLVALLEALCR 309 (412)
T ss_pred CcccccCHHHHHHHHHHHHHHHHHhcC---CCcEEEEEEEEecCCCCeEECCeEEEEEEeeCCCHHHHHHHHHHHHHHHH
Confidence 75 689999999999999998653321 2368999999987 799999999999999999999999999999999999
Q ss_pred HHHHhhCCeEEEEeeccCCCCcccCCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhhcCcEEEEecCCCCCCC
Q 013442 314 KQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKG 393 (443)
Q Consensus 314 ~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~~~~~ip~~~~~~G~~~~~pG 393 (443)
..+..+++++++.. ...++++..|+++++.+++++++ +|.++. ....+|++|+++|.+.+|++++ +| ||
T Consensus 310 ~~~~~~~~~~e~~~--~~~~~~~~~d~~lv~~~~~a~~~-~g~~~~--~~~~~g~tDa~~~~~~ip~~~~-~g-----p~ 378 (412)
T PRK12892 310 EIARRRGCRVSVDR--IAEYAPAPCDAALVDALRAAAEA-AGGPYL--EMPSGAGHDAQNMARIAPSAML-FV-----PS 378 (412)
T ss_pred HHHHHhCCeEEEEE--EecCCCcCCCHHHHHHHHHHHHH-cCCCcc--ccCcchHHHHHHHHhHCCEEEE-Ee-----cc
Confidence 88777788887765 45677778889999999999998 587653 3457889999999877886543 45 44
Q ss_pred CCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 013442 394 KFETGHSPYFRVNEDALPYGAALHASLATRYLL 426 (443)
Q Consensus 394 ~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~~ 426 (443)
....+|+|||+++++++.+++++|+.++.++++
T Consensus 379 ~~~~~H~~~E~v~i~~l~~~~~il~~~l~~~~~ 411 (412)
T PRK12892 379 KGGISHNPAEDTSPADLAQGARVLADTLRRLAR 411 (412)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 445699999999999999999999999998864
No 45
>PRK06156 hypothetical protein; Provisional
Probab=100.00 E-value=9.9e-46 Score=382.38 Aligned_cols=358 Identities=14% Similarity=0.140 Sum_probs=268.4
Q ss_pred CchhHHHHHHHHHHHHhCCCCCc-----cc----HHHHHHHHHHHHhCCCCeeecccCceEE-EEECCCCCcEEEEEEec
Q 013442 45 KPEIFYWMVNIRRKIHENPELGF-----QE----FETSKLIRAELDQMGIPYKFPVAVTGVV-GYIGTGQPPFVALRADM 114 (443)
Q Consensus 45 ~~~~~~~~i~ll~~l~~ipS~s~-----~E----~~~~~~l~~~l~~~G~~~~~~~~~~~vi-a~~~~~~~~~I~~~~H~ 114 (443)
++. +++++++++|++|||+++ +| .++++||.++|+++|++++.. ..+++ +++++...|+|+|+||+
T Consensus 43 ~~~--~~~~~~l~~lv~i~S~~~~~~~~~e~~~~~~~~~~l~~~l~~~G~~~~~~--~~~v~~~~~~g~~~~~l~l~gH~ 118 (520)
T PRK06156 43 KYG--AAAIESLRELVAFPTVRVEGVPQHENPEFIGFKKLLKSLARDFGLDYRNV--DNRVLEIGLGGSGSDKVGILTHA 118 (520)
T ss_pred hhH--HHHHHHHHHhcCcCcccCCCCCccCCccHHHHHHHHHHHHHHCCCeEEec--CCeEEEEEecCCCCCeEEEEEec
Confidence 445 899999999999999984 23 356799999999999998642 23344 67765445899999999
Q ss_pred ccccCcccCCCcc-----c----cCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchHHH
Q 013442 115 DALAMEESVEWEH-----K----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKK 181 (443)
Q Consensus 115 DtVp~~~~~~w~~-----~----~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~ 181 (443)
||||++. .+|.+ + .++||++||||+ |++++++++|+++|++.+..++++|.|+|++||| |+.|+++
T Consensus 119 DvVp~~~-~~W~~~~~~~~Pf~~~~~~g~lyGRG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~G~~~ 197 (520)
T PRK06156 119 DVVPANP-ELWVLDGTRLDPFKVTLVGDRLYGRGTEDDKGAIVTALYAMKAIKDSGLPLARRIELLVYTTEETDGDPLKY 197 (520)
T ss_pred CccCCCC-ccCccCCccCCCCceEEECCEEEEcCcccchHHHHHHHHHHHHHHHcCCCCCceEEEEEecccccCchhHHH
Confidence 9999976 47876 4 456899999997 8999999999999998887888999999999999 7789999
Q ss_pred HHHcCCCCccceeeEecCC----CCCCC-----------------------------ce------EEeec----------
Q 013442 182 MLDAGALENVEAIFGLHVS----SLFPV-----------------------------GT------VASRP---------- 212 (443)
Q Consensus 182 ~~~~g~~~~~d~~i~~~~~----~~~~~-----------------------------g~------~~~~~---------- 212 (443)
+++++.. .+..+..+.+ .+++. +. ..+..
T Consensus 198 ~~~~~~~--~~~~~~~D~~~~~~~~E~~~~~~~i~~~~~~~~~~~~~l~~~~gG~~~n~ip~~a~~~~~~~~~~~~~~~~ 275 (520)
T PRK06156 198 YLERYTP--PDYNITLDAEYPVVTAEKGWGTIMATFPKRAADGKGAEIVAMTGGAFANQIPQTAVATLSGGDPAALAAAL 275 (520)
T ss_pred HHHhcCC--CCeEEeeCCCCceEEEecceEEEEEEecCcCCCCCceeEEEEEcCCcCCCCCCccEEEEecCCHHHHHHHH
Confidence 9886542 2232211100 00110 00 00000
Q ss_pred -------Ccccccce---------EEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHHhhcc-----------------
Q 013442 213 -------GPTLAAGG---------FFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSR----------------- 259 (443)
Q Consensus 213 -------g~~~~g~~---------~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~~~~~----------------- 259 (443)
-.+++|.. |++|+++|+++|+|.|+.|.|||..+++++.+|+++...
T Consensus 276 ~~~~~~~~~~~~g~~~~~~~~~~~~~~I~v~Gk~aHsS~P~~G~NAI~~aa~ii~~L~~~l~~~~~~~~~~~i~~~~~~~ 355 (520)
T PRK06156 276 QAAAAAQVKRHGGGFSIDFKRDGKDVTITVTGKSAHSSTPESGVNPVTRLALFLQSLDGDLPHNHAADAARYINDLVGLD 355 (520)
T ss_pred HHHHHHHHhhcccCceEEEEEcCCeEEEEEEeEECCCCCCCCCccHHHHHHHHHHhccccccchhHHHHHHHHHHhhCCC
Confidence 00122433 899999999999999999999999999999998752100
Q ss_pred ----------ccCCCCCceEEEEEEEcCCcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeec
Q 013442 260 ----------EADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDD 329 (443)
Q Consensus 260 ----------~~~~~~~~t~~v~~i~gG~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~ 329 (443)
.....+..+++++.|.+|. +.|++.+|+|++|+++.+++.++|++.++..+...++++++..
T Consensus 356 ~~g~~~g~~~~~~~~g~~t~~~~~I~gg~------~~~~l~iDiR~~p~~~~eev~~~I~~~i~~~~~~~gv~ve~~~-- 427 (520)
T PRK06156 356 YLGEKFGVAYKDDFMGPLTLSPTVVGQDD------KGTEVTVNLRRPVGKTPELLKGEIADALAAWQAKHQVALDIDY-- 427 (520)
T ss_pred CccCcCCccccCCCccCcEEeeeEEEEeC------CeEEEEEEeeCCCCCCHHHHHHHHHHHHHHHHhhcCceEEEee--
Confidence 0111245678888888875 5899999999999999999999999999876655566666543
Q ss_pred cCCCCc-ccCCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhhcCcEEEEecCCCCCCCCCCCCCCCCCCCCCC
Q 013442 330 KSFYPV-TVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNED 408 (443)
Q Consensus 330 ~~~~~~-~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~~~~~ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~ 408 (443)
....|. ...++++++.+.+++++.+|.++. +..++|+||++++. |+ +.|||.. ||....+|++|||++++
T Consensus 428 ~~~~p~~~~~d~~lv~~l~~a~~~~~G~~~~--~~~~~ggTDa~~~~---~~--v~fGP~~--~g~~~~aHt~dE~V~ie 498 (520)
T PRK06156 428 YWGEPMVRDPKGPWLKTLLDVFGHFTGLDAK--PVAIAGSTNAKLFP---NA--VSFGPAM--PGVKYTGHTENEFKTVE 498 (520)
T ss_pred cCCCceeeCCCCHHHHHHHHHHHHHhCCCCc--eeeecChhhhhhCC---cc--EEEcCCC--CCCCCCCcCcccCCCHH
Confidence 222232 245778999999999998888663 34678899998874 33 3567543 35445699999999999
Q ss_pred chHHHHHHHHHHHHHHHh
Q 013442 409 ALPYGAALHASLATRYLL 426 (443)
Q Consensus 409 ~l~~~~~~~a~~~~~l~~ 426 (443)
++.+++++|++++.+++.
T Consensus 499 ~l~~~~~i~~~~l~~l~~ 516 (520)
T PRK06156 499 QFMLDLQMYTEMLIRIGN 516 (520)
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 999999999999999985
No 46
>PRK12893 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=2.1e-45 Score=371.43 Aligned_cols=346 Identities=17% Similarity=0.187 Sum_probs=273.6
Q ss_pred HHHHHHHHHHHhCCCC----------CcccHHHHHHHHHHHHhCCCCeeecccCceEEEEECCC-C-CcEEEEEEecccc
Q 013442 50 YWMVNIRRKIHENPEL----------GFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG-Q-PPFVALRADMDAL 117 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~----------s~~E~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~-~-~~~I~~~~H~DtV 117 (443)
+++++++++|++|||. |++|.++++||.++|+++||++++. ...|+++++++. + +|+|+|+||+|||
T Consensus 10 ~~~~~~l~~l~~i~s~~~~~~~~~~~s~~e~~~~~~l~~~l~~~G~~~~~~-~~~n~~a~~~g~~~~~~~l~l~~H~DtV 88 (412)
T PRK12893 10 ERLWDSLMALARIGATPGGGVTRLALTDEDREARDLLAQWMEEAGLTVSVD-AIGNLFGRRAGTDPDAPPVLIGSHLDTQ 88 (412)
T ss_pred HHHHHHHHHHhcccCCCCCcEEeccCCHHHHHHHHHHHHHHHHcCCEEEEc-CCCcEEEEeCCCCCCCCEEEEEecccCC
Confidence 7799999999999965 4458999999999999999999874 356999999653 2 5899999999999
Q ss_pred cCcccCCCccccCCCCeeecCcchHHHHHHHHHHHHHHcccccCCceEEEEEeccCCc------cchHHHHHHcCCC---
Q 013442 118 AMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEG------GGGAKKMLDAGAL--- 188 (443)
Q Consensus 118 p~~~~~~w~~~~~~~g~l~GrG~kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEEg------~~G~~~~~~~g~~--- 188 (443)
|++ |.+|| |++++++|+|+++|++.+..++++|.|+|++|||+ +.|+.++.+....
T Consensus 89 p~~------------g~~dg---k~gvaa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~~~~~~G~~~~~~~~~~~~~ 153 (412)
T PRK12893 89 PTG------------GRFDG---ALGVLAALEVVRTLNDAGIRTRRPIEVVSWTNEEGARFAPAMLGSGVFTGALPLDDA 153 (412)
T ss_pred CCC------------Ccccc---hhhHHHHHHHHHHHHHcCCCCCCCeEEEEEccccccccccccccHHHHhCcCChHHH
Confidence 964 33455 67999999999999998888999999999999994 3588777644220
Q ss_pred ----------------------------CccceeeEecCCCC---CCCceEEeecCcccccceEEEEEEEecCCCCCC-C
Q 013442 189 ----------------------------ENVEAIFGLHVSSL---FPVGTVASRPGPTLAAGGFFEAVINGKGGHAAI-P 236 (443)
Q Consensus 189 ----------------------------~~~d~~i~~~~~~~---~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss~-p 236 (443)
.+.+..+.+|..++ ++.+. ......+++|..+++|+++|+++|+|. |
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~i~~~~kG~~~~~i~v~G~~aHas~~p 232 (412)
T PRK12893 154 LARRDADGITLGEALARIGYRGTARVGRRAVDAYLELHIEQGPVLEAEGL-PIGVVTGIQGIRWLEVTVEGQAAHAGTTP 232 (412)
T ss_pred HhccCCCCCCHHHHHHHcCCCcccccccCCccEEEEEEeccCHHHHHCCC-cEEEEeeecccEEEEEEEEEECCCcCCCc
Confidence 01122333332111 00110 012234678999999999999999985 8
Q ss_pred C-CCCcHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEcC-CcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHH
Q 013442 237 Q-HTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGG-GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMK 314 (443)
Q Consensus 237 ~-~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gG-~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~ 314 (443)
+ .|+|||..+++++.+|+++..+.. ...+++++.|++| ...|+||++|++++|+|++|+++.+++.++|++.++.
T Consensus 233 ~~~G~NAI~~a~~~i~~l~~~~~~~~---~~~~~~vg~i~ggg~~~NvVP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~ 309 (412)
T PRK12893 233 MAMRRDALVAAARIILAVERIAAALA---PDGVATVGRLRVEPNSRNVIPGKVVFTVDIRHPDDARLDAMEAALRAACAK 309 (412)
T ss_pred chhccCHHHHHHHHHHHHHHHHHhcC---CCceEEEEEEEeeCCCceEECCeeEEEEEeeCCCHHHHHHHHHHHHHHHHH
Confidence 5 899999999999999998753321 2468999999985 7999999999999999999999999999999999998
Q ss_pred HHHhhCCeEEEEeeccCCCCcccCCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhhcCcEEEEecCCCCCCCC
Q 013442 315 QASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGK 394 (443)
Q Consensus 315 ~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~~~~~ip~~~~~~G~~~~~pG~ 394 (443)
.+..++++++++. ...++++..|+++++.++++.++. |.++. ....+|+||+++|.+.+|.++. +| ||.
T Consensus 310 ~~~~~~~~v~~~~--~~~~~~~~~d~~l~~~l~~~~~~~-g~~~~--~~~~~g~tD~~~~~~~~p~~v~-~g-----p~~ 378 (412)
T PRK12893 310 IAAARGVQVTVET--VWDFPPVPFDPALVALVEAAAEAL-GLSHM--RMVSGAGHDAMFLARVAPAAMI-FV-----PCR 378 (412)
T ss_pred HHHHcCCeEEEEE--EecCCCcCCCHHHHHHHHHHHHHc-CCCcc--ccCCccHHHHHHHHhhCCEEEE-Ee-----ecC
Confidence 7776777777764 345777788899999999988875 76653 3467789999999887885443 45 343
Q ss_pred CCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 013442 395 FETGHSPYFRVNEDALPYGAALHASLATRYLL 426 (443)
Q Consensus 395 ~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~~ 426 (443)
...+|++||+++++++.+++++|+.++.+++.
T Consensus 379 ~~~~Hs~dE~v~i~~l~~~~~i~~~ll~~~~~ 410 (412)
T PRK12893 379 GGISHNEAEDTEPADLAAGANVLLHAVLELAG 410 (412)
T ss_pred CCCCCCccccCCHHHHHHHHHHHHHHHHHhhc
Confidence 45689999999999999999999999999875
No 47
>PRK07205 hypothetical protein; Provisional
Probab=100.00 E-value=1.4e-45 Score=375.79 Aligned_cols=353 Identities=13% Similarity=0.053 Sum_probs=259.2
Q ss_pred HHHHHHHHHHHhCCCCCccc----------HHHHHHHHHHHHhCCCCeeecccCceEEEEECCCCCcEEEEEEecccccC
Q 013442 50 YWMVNIRRKIHENPELGFQE----------FETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAM 119 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~~E----------~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~~~~~I~~~~H~DtVp~ 119 (443)
+++++++++|++|||+|+++ .++++|+.++|+++||++++...+.+++++++. .+|+|+|+||+||||+
T Consensus 11 ~~~~~~l~~lv~i~S~s~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~g~-~~~~lll~gH~DvVp~ 89 (444)
T PRK07205 11 DACVAAIKTLVSYPSVLNEGENGTPFGQAIQDVLEATLDLCQGLGFKTYLDPKGYYGYAEIGQ-GEELLAILCHLDVVPE 89 (444)
T ss_pred HHHHHHHHHHcccccccCCCcCCCCCchhHHHHHHHHHHHHHhCCCEEEEcCCCeEEEEEecC-CCcEEEEEEeeccCCC
Confidence 78999999999999999765 568899999999999998765444567777753 3489999999999999
Q ss_pred cccCCCccc----cCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchHHHHHHcCCCCc-
Q 013442 120 EESVEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALEN- 190 (443)
Q Consensus 120 ~~~~~w~~~----~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~~~~~g~~~~- 190 (443)
++.++|+++ .++||+|||||+ ||+++++|.|+++|++.+..++++|.|+|++||| ++.|++++++.....+
T Consensus 90 ~~~~~W~~~Pf~~~v~dg~lyGRGa~DmKgglaa~l~Al~~l~~~~~~~~~~i~l~~~~dEE~g~~g~~~~~~~~~~~~~ 169 (444)
T PRK07205 90 GDLSDWQTPPFEAVEKDGCLFGRGTQDDKGPSMAALYAVKALLDAGVQFNKRIRFIFGTDEETLWRCMNRYNEVEEQATM 169 (444)
T ss_pred CCcccCCCCCCceEEECCEEEECCcccCcHHHHHHHHHHHHHHHcCCCCCCcEEEEEECCcccCcccHHHHHhCCCCCCe
Confidence 988889644 577899999997 8999999999999999888889999999999999 6789998887422110
Q ss_pred ---cce---eeEecC------CCCCCCceEEe--------ecCc---------------ccccc----eEEEEEEEecCC
Q 013442 191 ---VEA---IFGLHV------SSLFPVGTVAS--------RPGP---------------TLAAG----GFFEAVINGKGG 231 (443)
Q Consensus 191 ---~d~---~i~~~~------~~~~~~g~~~~--------~~g~---------------~~~g~----~~~~v~v~G~~a 231 (443)
.|. ++..+. --++|+..... .+.. ..+|. .+.+|+++|+++
T Consensus 170 ~~~~~~~~~v~~~ekG~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~l~~~~~~~g~~~~~~~~~v~v~G~~~ 249 (444)
T PRK07205 170 GFAPDSSFPLTYAEKGLLQAKLVGPGSDQLELEVGQAFNVVPAKASYQGPKLEAVKKELDKLGFEYVVKENEVTVLGKSV 249 (444)
T ss_pred eECCCCCCceEEEEeceEEEEEEeCCccceEEecCCcccccCceeEEEecCHHHHHHHHHhcCceEeecCcEEEEEeEEc
Confidence 110 000000 00112211100 1110 11232 234999999999
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHHHhhc-----c--------------ccC-CCCCceEEEEEEEcCCcCccccCcEEEEE
Q 013442 232 HAAIPQHTIDPIVAASNVIVSLQHLVS-----R--------------EAD-PLDSQVLTVAKFEGGGAFNIIPDSVTIGG 291 (443)
Q Consensus 232 Hss~p~~g~NAi~~~~~~i~~l~~~~~-----~--------------~~~-~~~~~t~~v~~i~gG~~~n~vP~~a~~~~ 291 (443)
|||.|+.|.|||..+++++.++++... + ..+ ..+..++|++. .|+||++|++.+
T Consensus 250 Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~nvg~------~nvvP~~a~~~l 323 (444)
T PRK07205 250 HAKDAPQGINAVIRLAKALVVLEPHPALDFLANVIGEDATGLNIFGDIEDEPSGKLSFNIAG------LTITKEKSEIRI 323 (444)
T ss_pred ccCCCccCcCHHHHHHHHHHhccHHHHHHHHHHhcCCCCccccCCccccCCCcCCceEEeEE------EEEECCEEEEEE
Confidence 999999999999999999988864310 0 001 12356788876 489999999999
Q ss_pred EEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCc--ccCCHHHHHHHHHHHHHhcCCcccccCCCCCCCc
Q 013442 292 TFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPV--TVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTE 369 (443)
Q Consensus 292 diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~t 369 (443)
|+|++|+.+.+++.++|++.+++ .+..+ .. ...++| .+.++++++.+.+++++.+|.+.. ...++|++
T Consensus 324 d~R~~p~~~~e~v~~~i~~~~~~----~~v~~--~~--~~~~~p~~~~~~~~lv~~l~~~~~~~~g~~~~--~~~~gg~~ 393 (444)
T PRK07205 324 DIRIPVLADKEKLVQQLSQKAQE----YGLTY--EE--FDYLAPLYVPLDSELVSTLMSVYQEKTGDDSP--AQSSGGAT 393 (444)
T ss_pred EEeCCCCCCHHHHHHHHHHHHHH----cCcEE--EE--ecCCCceeeCCCcHHHHHHHHHHHHHhCCCCc--eEEeccHH
Confidence 99999999999999999998654 34333 32 122344 356788999999999988787542 23345555
Q ss_pred hHHHHHhhcCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 013442 370 DFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLL 426 (443)
Q Consensus 370 Da~~~~~~ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~~ 426 (443)
|+..+ .|++ .+|+.. ||+...+|+||||++++++.+++++|+.++.++++
T Consensus 394 ~~~~~---~~~i--~~G~~~--Pg~~~~aH~~nE~v~i~~l~~~~~~l~~~l~~l~~ 443 (444)
T PRK07205 394 FARTM---PNCV--AFGALF--PGAPQTEHQANEHIVLEDLYRAMDIYAEAIYRLTT 443 (444)
T ss_pred HHHhC---CCcE--EECCcc--CCCCCCCcCcccCccHHHHHHHHHHHHHHHHHHhc
Confidence 54332 3433 467655 66667899999999999999999999999999875
No 48
>PRK05469 peptidase T; Provisional
Probab=100.00 E-value=2.9e-45 Score=369.67 Aligned_cols=350 Identities=15% Similarity=0.177 Sum_probs=273.3
Q ss_pred HHHHHHHHHHHhCCCCCcc----------cHHHHHHHHHHHHhCCCC-eeecccCceEEEEECCC---CCcEEEEEEecc
Q 013442 50 YWMVNIRRKIHENPELGFQ----------EFETSKLIRAELDQMGIP-YKFPVAVTGVVGYIGTG---QPPFVALRADMD 115 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~~----------E~~~~~~l~~~l~~~G~~-~~~~~~~~~via~~~~~---~~~~I~~~~H~D 115 (443)
+++++.|++|++|||+|.+ |.++++||+++|+++|++ ++.+ ...|+++.++++ ++|+|+|+||||
T Consensus 2 ~~~~~~l~~~~~i~s~s~~~~~~~~~~~~~~~~a~~l~~~l~~~G~~~~~~~-~~~~v~~~~~g~~~~~~~~i~l~~H~D 80 (408)
T PRK05469 2 DKLLERFLRYVKIDTQSDENSTTVPSTEGQWDLAKLLVEELKELGLQDVTLD-ENGYVMATLPANVDKDVPTIGFIAHMD 80 (408)
T ss_pred chHHHHHHhhEEeecccCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeEEEC-CCeEEEEEecCCCCCCCCeEEEEEecc
Confidence 5688999999999999966 789999999999999997 5543 456899999653 249999999999
Q ss_pred cccCccc---------------------CCCcccc--------CCCCeeecCc-----c--hHHHHHHHHHHHHHHcccc
Q 013442 116 ALAMEES---------------------VEWEHKS--------KVPGKMHACG-----H--DAHVAMLLGAAKMLQVFRH 159 (443)
Q Consensus 116 tVp~~~~---------------------~~w~~~~--------~~~g~l~GrG-----~--kg~~a~~l~a~~~l~~~~~ 159 (443)
|||+.+. ..|++++ ..++.+|||| + ||+++++++|+++|++.+.
T Consensus 81 ~vp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~rG~~~lg~D~Kgglaa~l~a~~~l~~~~~ 160 (408)
T PRK05469 81 TAPDFSGKNVKPQIIENYDGGDIALGDGNEVLSPAEFPELKNYIGQTLITTDGTTLLGADDKAGIAEIMTALEYLIAHPE 160 (408)
T ss_pred CCCCCCCCCCCCEEeccCCCcceecCCCceEechHhCchHHhccCCCEEEcCCCEeecccchHHHHHHHHHHHHHHhCCC
Confidence 9987541 2344331 2336788888 3 8999999999999998766
Q ss_pred cCCceEEEEEeccCCccchHHHHHHcCCCCccceeeEecCCCCCCCceEEeecCcccccceEEEEEEEecCCCCC-CCCC
Q 013442 160 EIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAA-IPQH 238 (443)
Q Consensus 160 ~l~~~i~~i~~~dEEg~~G~~~~~~~g~~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss-~p~~ 238 (443)
.++++|.|+|++|||.+.|++.++.++. ..++.++.+. .+.|.+.. ..+|..+++|+++|+++|++ .|+.
T Consensus 161 ~~~g~v~~~f~~dEE~g~Ga~~~~~~~~--~~~~~~~~~~---~~~g~~~~----~~~g~~~~~i~v~Gk~~Ha~~~p~~ 231 (408)
T PRK05469 161 IKHGDIRVAFTPDEEIGRGADKFDVEKF--GADFAYTVDG---GPLGELEY----ENFNAASAKITIHGVNVHPGTAKGK 231 (408)
T ss_pred CCCCCEEEEEecccccCCCHHHhhhhhc--CCcEEEEecC---CCcceEEe----ccCceeEEEEEEeeecCCCCCCccc
Confidence 6789999999999994479998864432 3455554442 34565433 24688899999999999987 5899
Q ss_pred CCcHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEcCCcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHh
Q 013442 239 TIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASV 318 (443)
Q Consensus 239 g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gG~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~ 318 (443)
|.||+..+++++..|+++..+........+++++.++|| |++|++++|+|+.|..+.+.+.++|++.+++.+..
T Consensus 232 g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~i~~g~i~gg------p~~~~i~~diR~~~~e~~e~i~~~i~~~~~~~~~~ 305 (408)
T PRK05469 232 MVNALLLAADFHAMLPADETPETTEGYEGFYHLTSIKGT------VEEAELSYIIRDFDREGFEARKALMQEIAKKVNAK 305 (408)
T ss_pred ccCHHHHHHHHHHhCCCCCCCCCCCCceEEEEEEEEEEc------cceEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999988765422211112245788888876 79999999999999999999999999999998876
Q ss_pred h-CCeEEEEeeccCC--CCcccCCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhh-cCcEEEEecCCCCCCCC
Q 013442 319 Q-RCNATVTFDDKSF--YPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGK 394 (443)
Q Consensus 319 ~-~~~~~v~~~~~~~--~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~~~~~-ip~~~~~~G~~~~~pG~ 394 (443)
+ ++++++++..... .++..+|+++++.+++++++. |.++. ...+.|++|+++|... +|+++++ ||.
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~a~~~~-g~~~~--~~~~~ggtD~~~~~~~giP~v~~g-------pG~ 375 (408)
T PRK05469 306 YGEGRVELEIKDQYYNMREKIEPHPHIVDLAKQAMEDL-GIEPI--IKPIRGGTDGSQLSFMGLPCPNIF-------TGG 375 (408)
T ss_pred cCCCeEEEEEeehhhhhhhhhcCCHHHHHHHHHHHHHc-CCCcE--EecCCCcccHHHHhhCCCceEEEC-------cCc
Confidence 6 5677776521111 124567889999999999886 87653 2357789999999876 9987654 333
Q ss_pred CCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 013442 395 FETGHSPYFRVNEDALPYGAALHASLATRYLL 426 (443)
Q Consensus 395 ~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~~ 426 (443)
..+|++||+++++++..++++|.+++..++.
T Consensus 376 -~~~H~~~E~v~i~~l~~~~~~~~~~~~~~~~ 406 (408)
T PRK05469 376 -HNFHGKFEFVSLESMEKAVEVIVEIAELTAE 406 (408)
T ss_pred -ccCcCcceeeEHHHHHHHHHHHHHHHHHHhc
Confidence 2499999999999999999999999998875
No 49
>PRK09290 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=6.5e-45 Score=367.63 Aligned_cols=346 Identities=16% Similarity=0.190 Sum_probs=273.5
Q ss_pred HHHHHHHHHHHhC-C---------CCCcccHHHHHHHHHHHHhCCCCeeecccCceEEEEECCC--CCcEEEEEEecccc
Q 013442 50 YWMVNIRRKIHEN-P---------ELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG--QPPFVALRADMDAL 117 (443)
Q Consensus 50 ~~~i~ll~~l~~i-p---------S~s~~E~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~--~~~~I~~~~H~DtV 117 (443)
+.+++++++|++| + |.|++|.++++||.++|+++||++++. .+.|++++++++ ++|+|+|+||+|||
T Consensus 7 ~~~~~~~~~l~~~~~~~~~g~~~~s~s~~e~~~a~~l~~~l~~~g~~~~~~-~~~nl~a~~~g~~~~~~~l~l~gH~DtV 85 (413)
T PRK09290 7 ERLWARLDELAKIGATPDGGVTRLALSPEDLQARDLFAEWMEAAGLTVRVD-AVGNLFGRLEGRDPDAPAVLTGSHLDTV 85 (413)
T ss_pred HHHHHHHHHHhcccCCCCCceeeccCCHHHHHHHHHHHHHHHHcCCEEEEc-CCCcEEEEecCCCCCCCEEEEecCccCC
Confidence 6688888998888 3 778899999999999999999999874 457999999653 25899999999999
Q ss_pred cCcccCCCccccCCCCeeecCcchHHHHHHHHHHHHHHcccccCCceEEEEEeccCCcc------chHHHHHHcCC----
Q 013442 118 AMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGG------GGAKKMLDAGA---- 187 (443)
Q Consensus 118 p~~~~~~w~~~~~~~g~l~GrG~kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEEg~------~G~~~~~~~g~---- 187 (443)
|++. .++| |++++++++|+++|++.+..++++|.|++++|||++ .|++.+++...
T Consensus 86 p~~g------------~~d~---k~g~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~G~~~~~~~~~~~~~ 150 (413)
T PRK09290 86 PNGG------------RFDG---PLGVLAGLEAVRTLNERGIRPRRPIEVVAFTNEEGSRFGPAMLGSRVFTGALTPEDA 150 (413)
T ss_pred CCCC------------CcCC---HHHHHHHHHHHHHHHHcCCCCCCCeEEEEEcCCccccccCccccHHHHHcccCHHHH
Confidence 9753 2222 779999999999999988888999999999999942 47777653211
Q ss_pred ------------------CCccceeeEe-------------cCCC---CCCCceEEeecCcccccceEEEEEEEecCCCC
Q 013442 188 ------------------LENVEAIFGL-------------HVSS---LFPVGTVASRPGPTLAAGGFFEAVINGKGGHA 233 (443)
Q Consensus 188 ------------------~~~~d~~i~~-------------~~~~---~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHs 233 (443)
-.+.|++++. |++. .+|.+.. .....+++|..+++|+++|+++|+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~ept~~~~~~~~~~~~~~~~e~~~~~-~~i~~~~kG~~~~~i~v~Gk~aHa 229 (413)
T PRK09290 151 LALRDADGVSFAEALAAIGYDGDEAVGAARARRDIKAFVELHIEQGPVLEAEGLP-IGVVTGIVGQRRYRVTFTGEANHA 229 (413)
T ss_pred HhccCCCCCCHHHHHHHcCCChhhccccccCCCCccEEEEEEeccCHHHHHCCCc-EEEEeeeeccEEEEEEEEEECCCC
Confidence 0123444421 1100 0222211 122356789999999999999998
Q ss_pred C-CC-CCCCcHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEcC-CcCccccCcEEEEEEEecCChHHHHHHHHHHHH
Q 013442 234 A-IP-QHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGG-GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEE 310 (443)
Q Consensus 234 s-~p-~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gG-~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~ 310 (443)
+ .| +.|.|||..+++++.+|+++..+.. ...+++++.+++| ...|+||++|++++|+|+.|+++.+++.++|++
T Consensus 230 s~~P~~~g~NAI~~~~~~i~~l~~l~~~~~---~~~~~~~g~i~~g~~~~NvIP~~a~~~~diR~~p~e~~e~v~~~i~~ 306 (413)
T PRK09290 230 GTTPMALRRDALLAAAEIILAVERIAAAHG---PDLVATVGRLEVKPNSVNVIPGEVTFTLDIRHPDDAVLDALVAELRA 306 (413)
T ss_pred CCCCchhccCHHHHHHHHHHHHHHHHHhcC---CCeEEEEEEEEEcCCCCeEECCEEEEEEEEeCCCHHHHHHHHHHHHH
Confidence 8 68 5899999999999999988653221 2358999999975 799999999999999999999999999999999
Q ss_pred HHHHHHHhhCCeEEEEeeccCCCCcccCCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhhcCcEEEEecCCCC
Q 013442 311 VVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDE 390 (443)
Q Consensus 311 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~~~~~ip~~~~~~G~~~~ 390 (443)
.+++.+...++++++.. ...++++..|+++++.+++++++. |.++. ....+|++|+++|...+|++++ +|
T Consensus 307 ~~~~~~~~~~~~~e~~~--~~~~~~~~~d~~lv~~l~~a~~~~-g~~~~--~~~~~g~tDa~~~~~~iP~~~~-~g---- 376 (413)
T PRK09290 307 AAEAIAARRGVEVEIEL--ISRRPPVPFDPGLVAALEEAAERL-GLSYR--RLPSGAGHDAQILAAVVPTAMI-FV---- 376 (413)
T ss_pred HHHHHHHHcCCeEEEEE--EecCCCccCCHHHHHHHHHHHHHc-CCCcc--ccCCccchHHHHHhccCCEEEE-Ee----
Confidence 99987766677777765 445777788899999999999776 76542 3457789999999766997554 44
Q ss_pred CCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 013442 391 TKGKFETGHSPYFRVNEDALPYGAALHASLATRYLL 426 (443)
Q Consensus 391 ~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~~ 426 (443)
||....+|++||+++++++.+++++|+.++.+++.
T Consensus 377 -p~~~~~~H~~dE~v~i~~l~~~~~v~~~~l~~l~~ 411 (413)
T PRK09290 377 -PSVGGISHNPAEFTSPEDCAAGANVLLHALLELAE 411 (413)
T ss_pred -ccCCCCCCCccccCCHHHHHHHHHHHHHHHHHHhc
Confidence 33345689999999999999999999999999985
No 50
>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase. This clade of mainly archaeal and related bacterial species contains two characterized enzymes, an deacetylase with specificity for both N-acetyl-ornithine and N-acetyl-lysine from Thermus which is found within a lysine biosynthesis operon, and a fusion protein with acetyl-glutamate kinase (an enzyme of ornithine biosynthesis) from Lactobacillus. It is possible that all of the sequences within this clade have dual specificity, or that a mix of specificities have evolved within this clade.
Probab=100.00 E-value=1.5e-45 Score=362.62 Aligned_cols=325 Identities=13% Similarity=0.098 Sum_probs=256.0
Q ss_pred HHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeecccCceEEEEECCCCCcEEEEEEecccccCcccCCCccccCCCCe
Q 013442 55 IRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWEHKSKVPGK 134 (443)
Q Consensus 55 ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~~~~~I~~~~H~DtVp~~~~~~w~~~~~~~g~ 134 (443)
++++|++|||+|++|.++++||.++|+++|+++..+ ...|+++..++ ++|+|+|+||+||||. .|+. .++||+
T Consensus 2 ~l~~lv~i~s~s~~e~~~~~~l~~~l~~~g~~~~~~-~~~~~~~~~~~-~~~~i~~~~H~D~vp~----~~~~-~~~~g~ 74 (336)
T TIGR01902 2 LLKDLLEIYSPSGKEANAAKFLEEISKDLGLKLIID-DAGNFILGKGD-GHKKILLAGHVDTVPG----YIPV-KIEGGL 74 (336)
T ss_pred hHHHHhcCCCCCcchHHHHHHHHHHHHHcCCEEEEC-CCCcEEEEeCC-CCceEEEEccccccCC----Cccc-EEeCCE
Confidence 689999999999999999999999999999998543 34588887643 3599999999999984 3544 356899
Q ss_pred eecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchHHHHHHcCCCCccceeeEecCCCCCCCceEEe
Q 013442 135 MHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVAS 210 (443)
Q Consensus 135 l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~~~~~g~~~~~d~~i~~~~~~~~~~g~~~~ 210 (443)
+||||+ |++++++++|+++|++. +.+|.|++++||| ++.|++++++++. .+++++.+ |++.-
T Consensus 75 i~GrG~~D~Kg~~aa~l~a~~~l~~~----~~~i~~~~~~dEE~g~~G~~~~~~~~~---~~~~ii~e-----pt~~~-- 140 (336)
T TIGR01902 75 LYGRGAVDAKGPLIAMIFATWLLNEK----GIKVIVSGLVDEESSSKGAREVIDKNY---PFYVIVGE-----PSGAE-- 140 (336)
T ss_pred EEEecccCCCcHHHHHHHHHHHHHhC----CCcEEEEEEeCcccCCccHHHHHhhcC---CCEEEEec-----CCCCc--
Confidence 999997 89999999999999864 3589999999999 6789999998754 23555544 33311
Q ss_pred ecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHH-hhccccCCCCCceEEEEEEEcCCcCccccCcEEE
Q 013442 211 RPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQH-LVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTI 289 (443)
Q Consensus 211 ~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~-~~~~~~~~~~~~t~~v~~i~gG~~~n~vP~~a~~ 289 (443)
....+++|..+++++++|+++|+|.|. ||+..+..++..|.+ +..+ ......+++++.++||...|+||++|++
T Consensus 141 ~i~~~~kG~~~~~v~~~G~~~Hss~~~---~ai~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~i~gg~~~nvIP~~a~~ 215 (336)
T TIGR01902 141 GITLGYKGSLQLKIMCEGTPFHSSSAG---NAAELLIDYSKKIIEVYKQP--ENYDKPSIVPTIIRFGESYNDTPAKLEL 215 (336)
T ss_pred ceeeeeeeEEEEEEEEEecCcccCCCh---hHHHHHHHHHHHHHHHhccc--cCCCCCcceeEEEEccCCCcCCCceEEE
Confidence 112356899999999999999999885 488899999998873 3211 1122357899999999999999999999
Q ss_pred EEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcc--cCCHHHHHHHHHHHHHhcCCcccccCCCCCC
Q 013442 290 GGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVT--VNNKNLHEHFQKVAADMLGVQNIKENRPLMG 367 (443)
Q Consensus 290 ~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g 367 (443)
++|+|+.|+++.+++.++|++. ...++++. ..++|+ +.|+++++.++++++++ +.++. .....|
T Consensus 216 ~idiR~~p~~~~~~~~~~i~~~-------~~~~~~~~----~~~~p~~~~~~~~lv~~~~~a~~~~-~~~~~--~~~~~g 281 (336)
T TIGR01902 216 HFDLRYPPNNKPEEAIKEITDK-------FPICLEIV----DETPPYKVSRNNPLVRAFVRAIRKQ-GMKPR--LKKKTG 281 (336)
T ss_pred EEEEeeCCCCCHHHHHHHHHhc-------cCceEEEE----eccCceecCCCCHHHHHHHHHHHHc-CCCeE--Eeeccc
Confidence 9999999999999988887761 23333332 233444 56788999999999987 55442 234568
Q ss_pred CchHHHHHhh--cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 013442 368 TEDFSFFAEA--IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLL 426 (443)
Q Consensus 368 ~tDa~~~~~~--ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~~ 426 (443)
++|+++|.+. +|++ .|| ||....+|+||||++++++.+++++|+.++..+++
T Consensus 282 ~tD~~~~~~~~g~p~v--~~G-----pg~~~~aH~~nE~v~i~~l~~~~~~~~~~l~~l~~ 335 (336)
T TIGR01902 282 TSDMNILAPIWTVPMV--AYG-----PGDSTLDHTPQEKISLAEYLIGIKTLMLAIEELWQ 335 (336)
T ss_pred cCccceeccccCCCeE--EEC-----CCCcccCCCCcceeEHHHHHHHHHHHHHHHHHHhc
Confidence 8999999774 6755 366 56656799999999999999999999999998874
No 51
>PRK12891 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=1.3e-43 Score=358.04 Aligned_cols=347 Identities=16% Similarity=0.127 Sum_probs=271.9
Q ss_pred HHHHHHHHHHhC---C-------CCCcccHHHHHHHHHHHHhCCCCeeecccCceEEEEECCC-C-CcEEEEEEeccccc
Q 013442 51 WMVNIRRKIHEN---P-------ELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG-Q-PPFVALRADMDALA 118 (443)
Q Consensus 51 ~~i~ll~~l~~i---p-------S~s~~E~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~-~-~~~I~~~~H~DtVp 118 (443)
++++.+..|-+| | +.+++|.++++||.++|+++|++++.+ ...|+++++++. + +|+|+|+||+||||
T Consensus 11 ~~~~~~~~~~~~~~~~~~g~~r~~~~~~e~~~~~~l~~~l~~~G~~v~~~-~~gNl~a~~~g~~~~~~~l~~~~H~DtVp 89 (414)
T PRK12891 11 RLWASLERMAQIGATPKGGVCRLALTDGDREARDLFVAWARDAGCTVRVD-AMGNLFARRAGRDPDAAPVMTGSHADSQP 89 (414)
T ss_pred HHHHHHHHHHhccCCCCCceeeccCCHHHHHHHHHHHHHHHHCCCEEEEC-CCCCEEEEecCCCCCCCeEEEEecccCCC
Confidence 455556666555 2 335678999999999999999999875 356999999664 2 48999999999999
Q ss_pred CcccCCCccccCCCCeeecCcchHHHHHHHHHHHHHHcccccCCceEEEEEeccCCcc------chHHHH----------
Q 013442 119 MEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGG------GGAKKM---------- 182 (443)
Q Consensus 119 ~~~~~~w~~~~~~~g~l~GrG~kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEEg~------~G~~~~---------- 182 (443)
.+.. ...|++++++++|+++|++.+..++++|.|++++|||++ .|+..+
T Consensus 90 ~gg~---------------~D~k~Gv~a~l~a~~~l~~~~~~~~~~i~v~~~~dEE~~~f~~~~~Gs~~~~g~~~~~~~~ 154 (414)
T PRK12891 90 TGGR---------------YDGIYGVLGGLEVVRALNDAGIETERPVDVVIWTNEEGSRFAPSMVGSGVFFGVYPLEYLL 154 (414)
T ss_pred CCcc---------------ccchhhHHHHHHHHHHHHHcCCCCCCCeEEEEecccccCcCCcccccHHHHhCCCCHHHHH
Confidence 7531 134899999999999999999999999999999999953 366533
Q ss_pred --------------HHcCCCC-------ccceeeEecCCCC---CCCceEEeecCcccccceEEEEEEEecCCCCC-CCC
Q 013442 183 --------------LDAGALE-------NVEAIFGLHVSSL---FPVGTVASRPGPTLAAGGFFEAVINGKGGHAA-IPQ 237 (443)
Q Consensus 183 --------------~~~g~~~-------~~d~~i~~~~~~~---~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss-~p~ 237 (443)
.+.|+.. +.++.+.+|.+++ ++.+. ......+++|..+++|+++|+++|+| .|+
T Consensus 155 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~e~h~e~g~vle~~~~-~~~iv~~~kG~~~~~v~v~Gk~aHa~~~P~ 233 (414)
T PRK12891 155 SRRDDTGRTLGEHLARIGYAGAEPVGGYPVHAAYELHIEQGAILERAGK-TIGVVTAGQGQRWYEVTLTGVDAHAGTTPM 233 (414)
T ss_pred hccCCCCCCHHHHHHHCCCCcccccccCCCCEEEEEEeCCCHHHHHCCC-cEEEEeeccCcEEEEEEEEeECCCCCCCCc
Confidence 3434311 1234455555443 12221 01123467899999999999999998 686
Q ss_pred -CCCcHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEcC-CcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHH
Q 013442 238 -HTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGG-GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQ 315 (443)
Q Consensus 238 -~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gG-~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~ 315 (443)
.|.|||..+++++.+|+++..+. ..+.++|++.|+|| .+.|+||++|++.+|+|++|.++.+.+.++|++.++..
T Consensus 234 ~~g~nAI~~aa~~i~~l~~~~~~~---~~~~t~~vg~I~gG~~~~NvVP~~~~~~~diR~~~~e~~e~v~~~i~~~~~~~ 310 (414)
T PRK12891 234 AFRRDALVGAARMIAFLDALGRRD---APDARATVGMIDARPNSRNTVPGECFFTVEFRHPDDAVLDRLDAALRAELARI 310 (414)
T ss_pred ccccCHHHHHHHHHHHHHHHHHhc---CCCeEEEEEEEEeeCCCcceECCeEEEEEEeeCCCHHHHHHHHHHHHHHHHHH
Confidence 58999999999999998875321 13469999999997 69999999999999999999999999999999999988
Q ss_pred HHhhCCeEEEEeeccCCCCcccCCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhhcCcEEEEecCCCCCCCCC
Q 013442 316 ASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKF 395 (443)
Q Consensus 316 ~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~~~~~ip~~~~~~G~~~~~pG~~ 395 (443)
+..++++++++. ...++++.+|+++++.+++++++. |.+.. ...++|++|++++...+|++++ +| ||..
T Consensus 311 ~~~~~~~~~~~~--~~~~~~~~~d~~lv~~l~~a~~~~-G~~~~--~~~~~ggtDa~~~~~giPt~~~-~g-----p~~~ 379 (414)
T PRK12891 311 ADETGLRADIEQ--IFGYAPAPFAPGCIDAVRDAARAL-GLSHM--DIVSGAGHDACFAARGAPTGMI-FV-----PCVD 379 (414)
T ss_pred HHHhCCEEEEEE--EecCCCcCCCHHHHHHHHHHHHHc-CCCce--ecCCcchHHHHHHHhhCCEEEE-EE-----cCCC
Confidence 777788777766 456677788899999999998765 87653 2357889998887666997543 44 4444
Q ss_pred CCCCCCCCCCCCCchHHHHHHHHHHHHHHHhhc
Q 013442 396 ETGHSPYFRVNEDALPYGAALHASLATRYLLEN 428 (443)
Q Consensus 396 ~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~~~~ 428 (443)
..+|+|||+++++++..++++|+.++.++.++.
T Consensus 380 ~~aH~~dE~v~i~~l~~~~~il~~~l~~~~~~~ 412 (414)
T PRK12891 380 GLSHNEAEAITPEWFAAGADVLLRAVLQSAQEA 412 (414)
T ss_pred CCCCCccccCCHHHHHHHHHHHHHHHHHHhhhc
Confidence 568999999999999999999999999997643
No 52
>TIGR01882 peptidase-T peptidase T. This model represents a tripeptide aminopeptidase known as Peptidase T, which has a substrate preference for hydrophobic peptides.
Probab=100.00 E-value=4e-44 Score=361.05 Aligned_cols=348 Identities=15% Similarity=0.140 Sum_probs=267.8
Q ss_pred HHHHHHHHHHHhCCCCCc----------ccHHHHHHHHHHHHhCCCC-eeecccCceEEEEECCCCC---cEEEEEEecc
Q 013442 50 YWMVNIRRKIHENPELGF----------QEFETSKLIRAELDQMGIP-YKFPVAVTGVVGYIGTGQP---PFVALRADMD 115 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~----------~E~~~~~~l~~~l~~~G~~-~~~~~~~~~via~~~~~~~---~~I~~~~H~D 115 (443)
+.+++.+.++++|+|.|+ .|.+++++|+++|+++|++ ++.+.+..|++|++++..+ |+|+|.+|||
T Consensus 3 ~~~~~~f~~~~~i~s~s~~~~~~~ps~~~~~~~a~~l~~~l~~lG~~~v~~d~~~gnv~~~~~~~~~~~~~~i~~~aHmD 82 (410)
T TIGR01882 3 EELLPRFLTYVKVNTRSDENSDTCPSTPGQLTFGNMLVDDLKSLGLQDAHYDEKNGYVIATIPSNTDKDVPTIGFLAHVD 82 (410)
T ss_pred hHHHHHHHhhEEEecccCCCCCCCCCCHhHHHHHHHHHHHHHHcCCceEEEcCCceEEEEEecCCCCCCCCEEEEEEecc
Confidence 568888999999999997 5668999999999999997 8776536799999866533 9999999999
Q ss_pred cccCcccC-------------------------CCccc-----------cCCCCeeecCcchHHHHHHHHHHHHHHcccc
Q 013442 116 ALAMEESV-------------------------EWEHK-----------SKVPGKMHACGHDAHVAMLLGAAKMLQVFRH 159 (443)
Q Consensus 116 tVp~~~~~-------------------------~w~~~-----------~~~~g~l~GrG~kg~~a~~l~a~~~l~~~~~ 159 (443)
|||+.... .|.|+ ...++.+||+.+|+++|++|+|+++|++.+.
T Consensus 83 Tv~~~~~~v~p~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~g~~l~G~D~KgglAa~l~A~~~L~e~~~ 162 (410)
T TIGR01882 83 TADFNGENVNPQIIENYDGESIIQLGDLEFTLDPDQFPNLSGYKGQTLITTDGTTLLGADDKAGIAEIMTAADYLINHPE 162 (410)
T ss_pred cCcCCCCCCCCEEEecCCCceeeecCCCCeEEChHhChhHHhccCceEEEcCCCEeecccCHHHHHHHHHHHHHHHhCCC
Confidence 99843221 34332 1346699998899999999999999998643
Q ss_pred cCCceEEEEEeccCCccchHHHHHHcCCCCccceeeEecCCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCC-CC
Q 013442 160 EIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIP-QH 238 (443)
Q Consensus 160 ~l~~~i~~i~~~dEEg~~G~~~~~~~g~~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss~p-~~ 238 (443)
.++++|.|+|++|||.+.|++.+..++. +++..+..+ ++|+|.+..+ ..|..+++|+++|+++|++.+ +.
T Consensus 163 ~~~g~I~~~ft~dEE~g~Ga~~l~~~~~--~~~~~~~i~---gep~g~i~~~----~~g~~~~~I~v~Gk~aHa~~~~~~ 233 (410)
T TIGR01882 163 IKHGTIRVAFTPDEEIGRGAHKFDVKDF--NADFAYTVD---GGPLGELEYE----TFSAAAAKITIQGNNVHPGTAKGK 233 (410)
T ss_pred CCCCCEEEEEECcccCCcCcchhhhhhc--CccEEEEeC---CCCCCeEEEc----cccceEEEEEEEEEecCcccChHH
Confidence 4689999999999995568888765432 345444433 3677776443 247899999999999999965 68
Q ss_pred CCcHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEcCCcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHh
Q 013442 239 TIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASV 318 (443)
Q Consensus 239 g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gG~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~ 318 (443)
|.||+..+.+++..+.... .+ ...+-+++.+++|. .|.+|++|++.+|+|+.+.++.+.+.++|++.+++.+..
T Consensus 234 g~nAi~~a~~~~~~l~~~~----~~-~~t~~~~g~i~~g~-i~giPd~a~l~~diR~~~~e~~e~i~~~i~~i~~~~~~~ 307 (410)
T TIGR01882 234 MINAAQIAIDLHNLLPEDD----RP-EYTEGREGFFHLLS-IDGTVEEAKLHYIIRDFEKENFQERKELMKRIVEKMNNE 307 (410)
T ss_pred HHHHHHHHHHHHHhcCCcC----CC-ccccceeEEEEEEe-EEEecCEEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988877655421 01 01111234455553 667999999999999999999999999999999988776
Q ss_pred hCC-eEEEEeeccCCCC----cccCCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhh-cCcEEEEecCCCCCC
Q 013442 319 QRC-NATVTFDDKSFYP----VTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETK 392 (443)
Q Consensus 319 ~~~-~~~v~~~~~~~~~----~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~~~~~-ip~~~~~~G~~~~~p 392 (443)
.++ .+++++ ...++ ..++++++++.++++++++ |.++. .....|++|+++|... +|++.+ | |
T Consensus 308 ~g~~~v~~~~--~~~~~~~~~~~~~~~~lv~~~~~a~~~~-G~~~~--~~~~~ggtDa~~~~~~Gip~~~~--G-----~ 375 (410)
T TIGR01882 308 YGQDRIKLDM--NDQYYNMAEKIEKVMEIVDIAKQAMENL-GIEPK--ISPIRGGTDGSQLSYMGLPTPNI--F-----A 375 (410)
T ss_pred cCCceEEEEE--EeeecChhhccCCCHHHHHHHHHHHHHh-CCCCc--ccccceechHHHHHhCCCCCCeE--c-----C
Confidence 663 456654 22232 3467889999999999886 87653 3457889999999877 898764 4 4
Q ss_pred CCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 013442 393 GKFETGHSPYFRVNEDALPYGAALHASLATRYL 425 (443)
Q Consensus 393 G~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~ 425 (443)
|. ..+|++|||++++++.+++++|++++..+.
T Consensus 376 G~-~~aHt~dE~v~i~~l~~~~~~~~~li~~~~ 407 (410)
T TIGR01882 376 GG-ENMHGRFEYISVDNMVKAVDVIVEIAKLNE 407 (410)
T ss_pred Cc-ccCcCCceEEEHHHHHHHHHHHHHHHHHHh
Confidence 44 459999999999999999999999998775
No 53
>PRK12890 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=2.8e-43 Score=355.95 Aligned_cols=346 Identities=15% Similarity=0.135 Sum_probs=267.1
Q ss_pred HHHHHHHHHHHhCC---------CCCcccHHHHHHHHHHHHhCCCCeeecccCceEEEEECCC--CCcEEEEEEeccccc
Q 013442 50 YWMVNIRRKIHENP---------ELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG--QPPFVALRADMDALA 118 (443)
Q Consensus 50 ~~~i~ll~~l~~ip---------S~s~~E~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~--~~~~I~~~~H~DtVp 118 (443)
..+++.+.++.+|| |+|++|.++++||.++|+++||++++. .+.|+++++++. ++|+|+|+||+||||
T Consensus 9 ~~~~~~~~~~~~i~~~~~~~~~~s~~~~e~~~~~~l~~~l~~~G~~~~~~-~~~nlia~~~g~~~~~~~l~~~~H~DtVp 87 (414)
T PRK12890 9 ERLLARLEELAAIGRDGPGWTRLALSDEERAARALLAAWMRAAGLEVRRD-AAGNLFGRLPGRDPDLPPLMTGSHLDTVP 87 (414)
T ss_pred HHHHHHHHHHhccCCCCCceeeccCCHHHHHHHHHHHHHHHHCCCEEEEc-CCCcEEEEeCCCCCCCCEEEEeCcccCCC
Confidence 34556666666555 789999999999999999999999875 457999999764 358999999999999
Q ss_pred CcccCCCccccCCCCeeecCcchHHHHHHHHHHHHHHcccccCCceEEEEEeccCCc-c-----chHHHHHHcCCC----
Q 013442 119 MEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEG-G-----GGAKKMLDAGAL---- 188 (443)
Q Consensus 119 ~~~~~~w~~~~~~~g~l~GrG~kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEEg-~-----~G~~~~~~~g~~---- 188 (443)
++. .. ..|++++++++|+++|++.+..++++|.|++++|||+ + .|++.+.+....
T Consensus 88 ~~g------------~~---D~~~g~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~~~~~~~G~~~~~~~~~~~~~~ 152 (414)
T PRK12890 88 NGG------------RY---DGILGVLAGLEVVAALREAGIRPPHPLEVIAFTNEEGVRFGPSMIGSRALAGTLDVEAVL 152 (414)
T ss_pred CCC------------Cc---CCHHHHHHHHHHHHHHHHcCCCCCCCeEEEEEecccccccCCccccHHHHHcccChHHHH
Confidence 752 21 2277999999999999988878899999999999994 2 466555432110
Q ss_pred ------------------Ccccee-------------eEecCCCC---CCCceEEeecCcccccceEEEEEEEecCCCCC
Q 013442 189 ------------------ENVEAI-------------FGLHVSSL---FPVGTVASRPGPTLAAGGFFEAVINGKGGHAA 234 (443)
Q Consensus 189 ------------------~~~d~~-------------i~~~~~~~---~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss 234 (443)
...|.. +..|...+ .+.+. ......+++|..|++|+++|+++|+|
T Consensus 153 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ep~~~~~~~~~h~~~g~~~~~~~~-~~~i~~~~kG~~~~~i~v~Gk~aHas 231 (414)
T PRK12890 153 ATRDDDGTTLAEALRRIGGDPDALPGALRPPGAVAAFLELHIEQGPVLEAEGL-PIGVVTAIQGIRRQAVTVEGEANHAG 231 (414)
T ss_pred hccCCCCCCHHHHHHHcCCChhhccccccCCCCccEEEEEeeCcCHHHHhCCC-ceEEEEeecCcEEEEEEEEEECCCCC
Confidence 011211 11111110 00111 01123467899999999999999998
Q ss_pred -CCC-CCCcHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEcC-CcCccccCcEEEEEEEecCChHHHHHHHHHHHHH
Q 013442 235 -IPQ-HTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGG-GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEV 311 (443)
Q Consensus 235 -~p~-~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gG-~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~ 311 (443)
.|+ .+.|||..+++++.+|+++..+.. ...+++++.|++| .+.|+||++|++++|+|+.|.++.+++.++|++.
T Consensus 232 ~~P~~~g~nAI~~~~~~i~~l~~~~~~~~---~~~~~~~g~i~~gg~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~ 308 (414)
T PRK12890 232 TTPMDLRRDALVAAAELVTAMERRARALL---HDLVATVGRLDVEPNAINVVPGRVVFTLDLRSPDDAVLEAAEAALLAE 308 (414)
T ss_pred cCChhhccCHHHHHHHHHHHHHHHHHhcC---CCeEEEEEEEEECCCCceEECCeEEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 485 458999999999999998753322 3568899999975 7999999999999999999999999999999999
Q ss_pred HHHHHHhhCCeEEEEeeccCCCCcccCCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhhcCcEEEEecCCCCC
Q 013442 312 VMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDET 391 (443)
Q Consensus 312 ~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~~~~~ip~~~~~~G~~~~~ 391 (443)
+++.+...+++++++. ...++++..|+++++.+.+++++. |.++. ....+|+||+++|.+..|.++. +|
T Consensus 309 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~~~~~-g~~~~--~~~~~g~tDa~~~~~~gp~~~~-~g----- 377 (414)
T PRK12890 309 LEAIAAARGVRIELER--LSRSEPVPCDPALVDAVEAAAARL-GYPSR--RMPSGAGHDAAAIARIGPSAMI-FV----- 377 (414)
T ss_pred HHHHHHHhCCeEEEEE--eecCCCcCCCHHHHHHHHHHHHHc-CCCce--ecCCcccHHHHHHHhhCCEEEE-Ee-----
Confidence 9987776777777765 456777788899999999999885 87653 2457889999999887665543 45
Q ss_pred CCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 013442 392 KGKFETGHSPYFRVNEDALPYGAALHASLATRYLL 426 (443)
Q Consensus 392 pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~~ 426 (443)
||....+|++||+++++++.+++++|+.++.++.+
T Consensus 378 p~~~~~aHs~dE~v~i~~l~~~~~i~~~ll~~l~~ 412 (414)
T PRK12890 378 PCRGGISHNPEEAMDPEDLAAGARVLLDAVLRLDR 412 (414)
T ss_pred cCCCCCCCCcCccCCHHHHHHHHHHHHHHHHHHhh
Confidence 44445699999999999999999999999998854
No 54
>TIGR01887 dipeptidaselike dipeptidase, putative. This model represents a clade of probable zinc dipeptidases, closely related to the characterized non-specific dipeptidase, PepV. Many enzymes in this clade have been given names including the terms "Xaa-His" and "carnosinase" due to the early mis-characterization of the Lactobacillus delbrueckii PepV enzyme. These names are likely too specific.
Probab=100.00 E-value=1.2e-42 Score=352.52 Aligned_cols=344 Identities=13% Similarity=0.083 Sum_probs=251.4
Q ss_pred HHHHHHHHHHHhCCCCCcc------------cHHHHHHHHHHHHhCCCCeeecccCceEEEEECCCCCcEEEEEEecccc
Q 013442 50 YWMVNIRRKIHENPELGFQ------------EFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDAL 117 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~~------------E~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~~~~~I~~~~H~DtV 117 (443)
+++++++++|++|||++.+ +.++++|+.++|+++|++++...+ ....+.++ +..|+|+|+||+|||
T Consensus 2 ~~~i~ll~~Lv~ipS~s~~~~p~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~-~~~~~~~~-~~~~~l~l~gH~D~V 79 (447)
T TIGR01887 2 DEILEDLKELIRIDSVEDLEEAKEGAPFGEGPKKALDKFLELAKRDGFTTENVDN-YAGYAEYG-QGEEYLGILGHLDVV 79 (447)
T ss_pred hHHHHHHHHhcCcCcCCCCCCCCCCCCcchhHHHHHHHHHHHHHHcCceEEEecC-ceEEEEeC-CCCCeEEEEeecCCC
Confidence 5689999999999999832 368999999999999999875321 11233343 234899999999999
Q ss_pred cCcccCCCccc----cCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchHHHHHHcCCCC
Q 013442 118 AMEESVEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALE 189 (443)
Q Consensus 118 p~~~~~~w~~~----~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~~~~~g~~~ 189 (443)
|+++ .|+++ .++||+|||||+ ||++++++.|+++|++.+..++++|.|+|++||| |+.|+++++++....
T Consensus 80 p~~~--~W~~~Pf~~~~~~g~lyGRGa~D~KG~laa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~l~~~~~~ 157 (447)
T TIGR01887 80 PAGD--GWTSPPFEAEIKDGRIYGRGTLDDKGPTIAALYAMKILKELGLKLKKKIRFIFGTDEETGWACIDYYFEHEEAP 157 (447)
T ss_pred CCCC--CCcCCCCceEEECCEEEECCcccCcHHHHHHHHHHHHHHHcCCCCCCcEEEEEECCcccCcHhHHHHHHhcCCC
Confidence 9986 68643 567899999998 8999999999999999888889999999999999 678999998764321
Q ss_pred c----cc----eeeEecC----------------------CCCCCCceEEe--ecCcccc-------------------c
Q 013442 190 N----VE----AIFGLHV----------------------SSLFPVGTVAS--RPGPTLA-------------------A 218 (443)
Q Consensus 190 ~----~d----~~i~~~~----------------------~~~~~~g~~~~--~~g~~~~-------------------g 218 (443)
. .| ++++ ++ ..++|++.+.. ....+++ |
T Consensus 158 ~~~~~~d~~~~~~~~-e~g~~~~~~~v~g~~~~~~~i~~~~~Ge~tn~~p~~a~~~v~~~~~~~~~~~~~~~~~~~~~~g 236 (447)
T TIGR01887 158 DIGFTPDAEFPIIYG-EKGIVTLEISFKDDTEGDVVLESFKAGEAFNMVPDHATAVISGKELLEVEKEKFVFFIAKELEG 236 (447)
T ss_pred CEEEeCCCCcceEEE-ecCeEEEEEEeccCCCCceeEEEEeCCCcCCccCcceEEEEeccchhHHHHHHHHHhhhcCcce
Confidence 1 12 2221 11 02334443200 0001112 4
Q ss_pred ce-----EEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHH--Hhhcc---------------------c-cCCCCCceE
Q 013442 219 GG-----FFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQ--HLVSR---------------------E-ADPLDSQVL 269 (443)
Q Consensus 219 ~~-----~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~--~~~~~---------------------~-~~~~~~~t~ 269 (443)
.. +++|+++|+++|||+|+.|.|||+.+++++..+. +...+ . ....+..++
T Consensus 237 ~~~~~~~~~~i~v~G~~aHss~p~~G~NAi~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~t~ 316 (447)
T TIGR01887 237 SFEVNDGTATITLEGKSAHGSAPEKGINAATYLALFLAQLNLAGGAKAFLQFLAEYLHEDHYGEKLGIDFHDDVSGDLTM 316 (447)
T ss_pred EEEecCCEEEEEEEeeecccCCCccCccHHHHHHHHHHhccCchhHHHHHHHHHHhcCCCCccccCCCcccCCCcCCcEE
Confidence 44 7999999999999999999999999999999886 21100 0 011245789
Q ss_pred EEEEEEcCCcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcc--cCCHHHHHHHH
Q 013442 270 TVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVT--VNNKNLHEHFQ 347 (443)
Q Consensus 270 ~v~~i~gG~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~d~~~~~~~~ 347 (443)
|++.|++| +|++|++.+|+|++|+++.+++.+++.+.+. +. ..+.. ....+|. +.++++++.+.
T Consensus 317 nvg~I~~g-----~p~~~~~~~d~R~~p~~~~e~~~~~i~~~~~------~~-~~~~~--~~~~~p~~~~~~~~lv~~l~ 382 (447)
T TIGR01887 317 NVGVIDYE-----NAEAGLIGLNVRYPVGNDPDTMLKNELAKES------GI-VEVTE--NGYLKPLYVPKDDPLVQTLM 382 (447)
T ss_pred EEEEEEEe-----CCcEEEEEEEEecCCCCCHHHHHHHHHHHhh------Cc-EEEEE--ccCCCCeEECCCCHHHHHHH
Confidence 99999988 3899999999999999999987777764322 21 22222 1112222 45678999999
Q ss_pred HHHHHhcCCcccccCCCCCCCchHHHHHhhcCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHH
Q 013442 348 KVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLA 421 (443)
Q Consensus 348 ~~~~~~~g~~~~~~~~~~~g~tDa~~~~~~ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~ 421 (443)
+++++.+|.++. .....|+||+.++ |.+ +.+|+.+ ||+...+|++||++++++|..++++|+.++
T Consensus 383 ~~~~~~~g~~~~--~~~~~ggtda~~~----~~~-i~~Gp~~--pG~~~~aH~~dE~v~i~~l~~~~~i~~~~~ 447 (447)
T TIGR01887 383 KVYEKQTGDEGT--PVAIGGGTYARLM----ENG-VAFGALF--PGEEDTMHQANEYIMIDDLLLATAIYAEAI 447 (447)
T ss_pred HHHHHHhCCCCC--eeEecchhhhhhC----CCc-EEeCCCC--CCCCCCccCCCcceeHHHHHHHHHHHHHhC
Confidence 999998887653 3456777887664 333 4577766 777788999999999999999999998763
No 55
>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family. Enzymes in this subfamily hydrolize the amide bonds of compounds containing carbamoyl groups or hydantoin rings. These enzymes are members of the broader family of amidases represented by pfam01546.
Probab=100.00 E-value=3.1e-42 Score=346.60 Aligned_cols=330 Identities=19% Similarity=0.199 Sum_probs=259.8
Q ss_pred CCCcccHHHHHHHHHHHHhCCCCeeecccCceEEEEECCC-C-CcEEEEEEecccccCcccCCCccccCCCCeeecCcch
Q 013442 64 ELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG-Q-PPFVALRADMDALAMEESVEWEHKSKVPGKMHACGHD 141 (443)
Q Consensus 64 S~s~~E~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~-~-~~~I~~~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~k 141 (443)
|.|++|.++++||+++|+++|++++++ ...|++++++++ + +|+|+|+||+||||.+ |+.+|+
T Consensus 25 ~~~~~e~~~~~~l~~~~~~~G~~~~~~-~~~nl~a~~~g~~~~~~~l~~~~H~DtV~~g------------g~~dg~--- 88 (401)
T TIGR01879 25 ALSPEDREAQDLFKKRMRAAGLEVRFD-EVGNLIGRKEGTEPPLEVVLSGSHIDTVVNG------------GNFDGQ--- 88 (401)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEEe-cCCcEEEEecCCCCCCCEEEEecccccCCCC------------CccCCH---
Confidence 447789999999999999999999875 357999999764 3 4899999999999964 445554
Q ss_pred HHHHHHHHHHHHHHcccccCCceEEEEEeccCCc------cchHHHHHHcCCCC--------------------------
Q 013442 142 AHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEG------GGGAKKMLDAGALE-------------------------- 189 (443)
Q Consensus 142 g~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEEg------~~G~~~~~~~g~~~-------------------------- 189 (443)
.+++++|+++++|++.+..++++|.|++++|||+ ..|++.++.....+
T Consensus 89 ~gvaa~l~a~~~l~~~g~~~~~~i~~~~~~dEE~~~f~~~~~Gs~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~ 168 (401)
T TIGR01879 89 LGVLAGIEVVDALKEAYVVPLHPIEVVAFTEEEGSRFPYGMWGSRNMVGLANPEDVRNICDAKGISFAEAMKACGPDLPN 168 (401)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCeEEEEEeCCcCcCcccccccHHHHhcccchhHHHhCcCCCCCCHHHHHHHcCCCccc
Confidence 4889999999999999989999999999999995 26887776422100
Q ss_pred -------ccceeeEecCCCC---CCCceEEeecCcccccceEEEEEEEecCCCCCC-CC-CCCcHHHHHHHHHHHHHHhh
Q 013442 190 -------NVEAIFGLHVSSL---FPVGTVASRPGPTLAAGGFFEAVINGKGGHAAI-PQ-HTIDPIVAASNVIVSLQHLV 257 (443)
Q Consensus 190 -------~~d~~i~~~~~~~---~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss~-p~-~g~NAi~~~~~~i~~l~~~~ 257 (443)
+.++.+..|...+ ++.|.. .....+++|..|++|+++|+++|++. |+ .|.||+..+++++.+|+++.
T Consensus 169 ~~~~~~~~~~~~~e~Hieqg~~l~~~g~~-~~v~~~~~G~~~~~i~v~G~~aHa~~~p~~~g~nAi~~aa~~i~~l~~l~ 247 (401)
T TIGR01879 169 QPLRPRGDIKAYVELHIEQGPVLESNGQP-IGVVNAIAGQRWYKVTLNGESNHAGTTPMSLRRDPLVAASRIIHQVEEKA 247 (401)
T ss_pred ccccccccccEEEEEEEcCCcChhhCCCe-EEEEEEecCcEEEEEEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHH
Confidence 1122333333222 111211 12234678999999999999999985 53 68999999999999999875
Q ss_pred ccccCCCCCceEEEEEEEcC-CcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcc
Q 013442 258 SREADPLDSQVLTVAKFEGG-GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVT 336 (443)
Q Consensus 258 ~~~~~~~~~~t~~v~~i~gG-~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 336 (443)
.+.. .+.+.+++.|++| ...|+||++|++.+|+|+.|+++.+++.++|++.+++.+...++++++++ ...++++
T Consensus 248 ~~~~---~~~~~~vg~i~~g~~~~NvVP~~a~~~~diR~~p~~~~e~v~~~i~~~~~~~~~~~~~~~~~~~--~~~~~~~ 322 (401)
T TIGR01879 248 KRMG---DPTVGTVGKVEARPNGVNVIPGKVTFTLDLRHTDAAVLRDFTQQLENDIKAISDERDIGIDIER--WMDEEPV 322 (401)
T ss_pred HhcC---CCeEEEEEEEEecCCceEEECCEEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHcCceEEEEE--eecCCCc
Confidence 3321 2357899999986 67999999999999999999999999999999999987776788888776 4457778
Q ss_pred cCCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhhcCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHH
Q 013442 337 VNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAAL 416 (443)
Q Consensus 337 ~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~~~~~ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~ 416 (443)
..|+++++.++++++++ |.++. ...++++||+++|.+..|..+ .|| ||....+|+||||++++++.+++++
T Consensus 323 ~~d~~lv~~l~~a~~~~-g~~~~--~~~~~ggtDa~~~~~~~~~~v-~fg-----Pg~~~~aH~~dE~v~~e~l~~~~~v 393 (401)
T TIGR01879 323 PCSEELVAALTELCERL-GYNAR--VMVSGAGHDAQILAPIVPIGM-IFI-----PSINGISHNPAEWSNITDCAEGAKV 393 (401)
T ss_pred CCCHHHHHHHHHHHHHc-CCCcc--ccccchHHHHHHHHhhCCEEE-EEe-----cCCCCCcCCCCccCCHHHHHHHHHH
Confidence 88999999999999876 76653 235788999999988754333 356 5555679999999999999999999
Q ss_pred HHHHHHHH
Q 013442 417 HASLATRY 424 (443)
Q Consensus 417 ~a~~~~~l 424 (443)
|+.++.++
T Consensus 394 l~~~i~~l 401 (401)
T TIGR01879 394 LYLMVYQL 401 (401)
T ss_pred HHHHHHhC
Confidence 99998763
No 56
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase.
Probab=100.00 E-value=1.8e-41 Score=348.10 Aligned_cols=346 Identities=18% Similarity=0.174 Sum_probs=255.9
Q ss_pred HHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeecccCceEEEEECCC----CCcEEEEEEecccccCccc---
Q 013442 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG----QPPFVALRADMDALAMEES--- 122 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~----~~~~I~~~~H~DtVp~~~~--- 122 (443)
+++++++++|++|||.|++|.++++||.++|+++|++++++. ..|+++++++. ..|+|+|.||+||||++..
T Consensus 4 ~~~~~~l~~l~~i~s~s~~e~~~~~~l~~~l~~~G~~~~~~~-~~n~~~~~~~~~g~~~~~~l~l~~HlDtV~~~~~~~~ 82 (477)
T TIGR01893 4 SRVFKYFEEISKIPRPSKNEKEVSNFIVNWAKKLGLEVKQDE-VGNVLIRKPATPGYENHPPIVLQGHMDMVCEKNEDSL 82 (477)
T ss_pred HHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHcCCeEEEeC-CCeEEEEEcCCCCCCCCCeEEEEeeccccCCCCCCCC
Confidence 678999999999999999999999999999999999988754 46999998542 2489999999999998753
Q ss_pred CCCccc----cCCCCeeecCcc------hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchHHHHHHcCCCCcc
Q 013442 123 VEWEHK----SKVPGKMHACGH------DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENV 191 (443)
Q Consensus 123 ~~w~~~----~~~~g~l~GrG~------kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~~~~~g~~~~~ 191 (443)
..|..+ .++||++||||+ |+++++++++++. .+ ..+++|.++|++||| ++.|++++..+.. ..
T Consensus 83 ~~w~~~p~~~~~~~~~i~GrG~~lg~D~k~gva~~l~~~~~---~~-~~~~~i~~~~~~dEE~g~~Gs~~l~~~~~--~~ 156 (477)
T TIGR01893 83 HDFEKDPIELIIDGDWLKARGTTLGADNGIGVAMGLAILED---NN-LKHPPLELLFTVDEETGMDGALGLDENWL--SG 156 (477)
T ss_pred CCCCCCCeEEEEeCCEEEECCccccccccHHHHHHHHHHhc---CC-CCCCCEEEEEEeccccCchhhhhcChhhc--CC
Confidence 367543 467899999996 5788888877654 33 356799999999999 6689999865432 22
Q ss_pred ceeeEecCCC------CCCCce-E--Ee--ecCcccccceEEEEEEEe-cCCCCC-CCCCCC-cHHHHHHHHHHHHHHhh
Q 013442 192 EAIFGLHVSS------LFPVGT-V--AS--RPGPTLAAGGFFEAVING-KGGHAA-IPQHTI-DPIVAASNVIVSLQHLV 257 (443)
Q Consensus 192 d~~i~~~~~~------~~~~g~-~--~~--~~g~~~~g~~~~~v~v~G-~~aHss-~p~~g~-NAi~~~~~~i~~l~~~~ 257 (443)
+.++..+... +.+.+. . .+ .....++|..+++|+++| +++||| .|+.|. ||+..+++++.+++...
T Consensus 157 ~~~~~~d~~~~~~~~~g~~~~~~~~~~~e~~~e~~~kG~~~~~i~~~G~~~~Hsg~~p~~~r~nAi~~aa~~i~~l~~~~ 236 (477)
T TIGR01893 157 KILINIDSEEEGEFIVGCAGGRNVDITFPVKYEKFTKNEEGYQISLKGLKGGHSGADIHKGRANANKLMARVLNELKENL 236 (477)
T ss_pred cEEEEecCCCCCeEEEECCCCeeEEEEEEEEEEecCCCceEEEEEEeCcCCCcCccccCCCCcCHHHHHHHHHHhhhhcC
Confidence 4444332100 011111 0 00 001124789999999999 999998 588885 99999999999988652
Q ss_pred ccccCCCCCceEEEEEEEcCCcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHH--------------------
Q 013442 258 SREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQAS-------------------- 317 (443)
Q Consensus 258 ~~~~~~~~~~t~~v~~i~gG~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~-------------------- 317 (443)
..+++.+.||.+.|+||++|++.+|+|.......+.+.+++.+.+...+.
T Consensus 237 ----------~~~v~~~~gg~~~N~ip~~~~~~~diR~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (477)
T TIGR01893 237 ----------NFRLSDIKGGSKRNAIPREAKALIAIDENDVKLLENLVKNFQSKFKSEYSELEPNITIEVSKRENSVKVF 306 (477)
T ss_pred ----------CeEEEEEeCCCcccccCCceEEEEEEChhHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEECCCccccc
Confidence 36789999999999999999999998866555555555555554443321
Q ss_pred ------------------------------------------------------------------------hhCCeEEE
Q 013442 318 ------------------------------------------------------------------------VQRCNATV 325 (443)
Q Consensus 318 ------------------------------------------------------------------------~~~~~~~v 325 (443)
..++ ++
T Consensus 307 d~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~t~n~g~i~~~~~~~~~~i~~R~~~~~~~~~i~~~i~~~~~~~~~--~v 384 (477)
T TIGR01893 307 SENTTDKLINALNGLPNGVQSVSDEEPGLVESSLNLGVVKTKENKVIFTFLIRSSVESDKDYVTEKIESIAKLAGA--RV 384 (477)
T ss_pred CHHHHHHHHHHHHHCCccceeeccCCCCeEEeeeeEEEEEEcCCEEEEEEEeCCCCchhHHHHHHHHHHHhhhcCe--EE
Confidence 1233 33
Q ss_pred EeeccCCCCcc--cCCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhhcCcE-EEEecCCCCCCCCCCCCCCCC
Q 013442 326 TFDDKSFYPVT--VNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGY-FYYLGMNDETKGKFETGHSPY 402 (443)
Q Consensus 326 ~~~~~~~~~~~--~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~~~~~ip~~-~~~~G~~~~~pG~~~~~H~p~ 402 (443)
+. ...++|+ +.|+++++.+.+++++.+|.++. ....+|++|++.|.+.+|.+ +..+|+ +. ..+|+||
T Consensus 385 ~~--~~~~~p~~~~~d~plv~~l~~a~~~~~g~~~~--~~~~~Ggtd~~~~~~~~~~i~~v~~Gp-----~~-~~~H~~n 454 (477)
T TIGR01893 385 EV--SAGYPSWQPDPQSNLLDTARKVYSEMFGEDPE--VKVIHAGLECGIISSKIPDIDMISIGP-----NI-YDPHSPN 454 (477)
T ss_pred EE--ecCCCcccCCCCCHHHHHHHHHHHHHHCCCCe--EEEeecCccHHHHHhhCCCceEEEeCC-----CC-CCCCCCC
Confidence 32 2344444 45688999999999999898763 34678899999888765543 355774 33 4599999
Q ss_pred CCCCCCchHHHHHHHHHHHHHH
Q 013442 403 FRVNEDALPYGAALHASLATRY 424 (443)
Q Consensus 403 E~i~i~~l~~~~~~~a~~~~~l 424 (443)
|++++++|.+++++|++++..+
T Consensus 455 E~i~i~~l~~~~~~~~~ll~~~ 476 (477)
T TIGR01893 455 ERVSISSVEKVWDFLVKVLERL 476 (477)
T ss_pred ceeeHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999988653
No 57
>PRK15026 aminoacyl-histidine dipeptidase; Provisional
Probab=100.00 E-value=5.7e-41 Score=341.94 Aligned_cols=343 Identities=16% Similarity=0.158 Sum_probs=255.7
Q ss_pred HHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeecccCceEEEEECCC----CCcEEEEEEecccccCccc---
Q 013442 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG----QPPFVALRADMDALAMEES--- 122 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~----~~~~I~~~~H~DtVp~~~~--- 122 (443)
+++++++++|++|||.|++|.++++||.++++++|++++++. ..|+++++.+. ..|.|+|.||+||||+++.
T Consensus 10 ~~~~~~l~~Lv~ips~S~~e~~~~~~l~~~~~~~G~~~~~d~-~gnvi~~~~~~~g~~~~~~v~l~gH~DtV~~~~~~~~ 88 (485)
T PRK15026 10 QPLWDIFAKICSIPHPSYHEEQLAEYIVGWAKEKGFHVERDQ-VGNILIRKPATAGMENRKPVVLQAHLDMVPQKNNDTV 88 (485)
T ss_pred HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHhCCCEEEEEe-cCeEEEEEcCCCCCCCCCEEEEEeeecccCCCCCCcc
Confidence 679999999999999999999999999999999999988753 45888887431 2489999999999998753
Q ss_pred CCCccc----cCCCCeeecCcc------hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchHHHHHHcCCCCcc
Q 013442 123 VEWEHK----SKVPGKMHACGH------DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENV 191 (443)
Q Consensus 123 ~~w~~~----~~~~g~l~GrG~------kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~~~~~g~~~~~ 191 (443)
.+|..+ .++||++||||+ |++++++|+++ ++.+. .+++|.++|++||| |+.|++++.. .. ..+
T Consensus 89 ~~w~~~P~~~~i~~~~l~g~Gt~lgaD~k~gva~~l~~l---~~~~~-~~~~i~~l~t~dEE~G~~ga~~l~~-~~-~~~ 162 (485)
T PRK15026 89 HDFTKDPIQPYIDGEWVKARGTTLGADNGIGMASALAVL---ADENV-VHGPLEVLLTMTEEAGMDGAFGLQS-NW-LQA 162 (485)
T ss_pred ccCCCCCceEEEcCCEEEeCCccccCccHHHHHHHHHHH---HhCCC-CCCCEEEEEEcccccCcHhHHHhhh-cc-CCc
Confidence 357533 457899999996 46788777654 44443 47899999999999 7789999855 22 357
Q ss_pred ceeeEecCCCCCCCceEE--eecC------------cccccceEEEEEEEe-cCCCCC-CCCCCC-cHHHHHHHHHHHHH
Q 013442 192 EAIFGLHVSSLFPVGTVA--SRPG------------PTLAAGGFFEAVING-KGGHAA-IPQHTI-DPIVAASNVIVSLQ 254 (443)
Q Consensus 192 d~~i~~~~~~~~~~g~~~--~~~g------------~~~~g~~~~~v~v~G-~~aHss-~p~~g~-NAi~~~~~~i~~l~ 254 (443)
+++|..++. ..|.+. +..| ...+|..+++|+++| +++||+ .|++|+ |||..+++++.++.
T Consensus 163 ~~~i~~e~~---~~g~l~~g~~G~~~~~~~~~~~r~~~~~g~~~~~i~v~Gl~ggHsG~~i~~g~~nAi~~la~~l~~~~ 239 (485)
T PRK15026 163 DILINTDSE---EEGEIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGGEIHVGLGNANKLLVRFLAGHA 239 (485)
T ss_pred CEEEEeCCC---CCCeEEEeCCCcceEEEEEEEEEEecCCCceEEEEEEECCCCcCChHHHCCCCccHHHHHHHHHHHhH
Confidence 888877653 223331 1110 012577899999999 999999 799999 99999999999854
Q ss_pred HhhccccCCCCCceEEEEEEEcCCcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHH---------------------
Q 013442 255 HLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVM--------------------- 313 (443)
Q Consensus 255 ~~~~~~~~~~~~~t~~v~~i~gG~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~--------------------- 313 (443)
. ..+++++.|+||+..|+||++|++.+++|.......+.+.+.+++.+.
T Consensus 240 ~----------~~~~~v~~i~GG~~~NaIp~~a~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (485)
T PRK15026 240 E----------ELDLRLIDFNGGTLRNAIPREAFATIAVAADKVDALKSLVNTYQEILKNELAEKEKNLALLLDSVANDK 309 (485)
T ss_pred h----------hCCeEEEEEeCCCccCCCCCCcEEEEEEChhHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEEccccc
Confidence 2 258899999999999999999999999996544433333333322221
Q ss_pred -----------------------------------------------------------------------HHHHhhCCe
Q 013442 314 -----------------------------------------------------------------------KQASVQRCN 322 (443)
Q Consensus 314 -----------------------------------------------------------------------~~~~~~~~~ 322 (443)
..+...+.+
T Consensus 310 ~~~~~~~~~~~~~~l~~~~~Gv~~~s~~~~g~v~~S~Nlg~v~~~~~~~~i~~~~Rs~~~~~~~~i~~~i~~~~~~~g~~ 389 (485)
T PRK15026 310 AALIAKSRDTFIRLLNATPNGVIRNSDVAKGVVETSLNVGVVTMTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLAGAK 389 (485)
T ss_pred cccCHHHHHHHHHHHHHCCcccEEeccCCCCeEEeeeEEEEEEEeCCEEEEEEEecCCCchHHHHHHHHHHHHHHHcCcE
Confidence 112222333
Q ss_pred EEEEeeccCCCCccc--CCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhhcCcE-EEEecCCCCCCCCCCCCC
Q 013442 323 ATVTFDDKSFYPVTV--NNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGY-FYYLGMNDETKGKFETGH 399 (443)
Q Consensus 323 ~~v~~~~~~~~~~~~--~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~~~~~ip~~-~~~~G~~~~~pG~~~~~H 399 (443)
+++ ...||++. .|+++++.+.++|++++|.++. .....|++|++.|.+..|.+ +..|||.. ..+|
T Consensus 390 ~~~----~~~~p~w~~~~ds~lv~~l~~~y~e~~G~~~~--~~~ihaglEcG~~~~~~p~i~~VsfGP~~------~~~H 457 (485)
T PRK15026 390 TEA----KGAYPGWQPDANSPVMHLVRETYQRLFNKTPN--IQIIHAGLECGLFKKPYPEMDMVSIGPTI------TGPH 457 (485)
T ss_pred EEE----eCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCe--EEEEEEEehHHHHHhhCCCCCEEEECCCC------CCCC
Confidence 322 33556654 4578999999999999998763 34688999999999765542 33577554 2489
Q ss_pred CCCCCCCCCchHHHHHHHHHHHHHH
Q 013442 400 SPYFRVNEDALPYGAALHASLATRY 424 (443)
Q Consensus 400 ~p~E~i~i~~l~~~~~~~a~~~~~l 424 (443)
+|||+++++++.+..+++..++.++
T Consensus 458 spdE~v~I~s~~~~~~~l~~~l~~~ 482 (485)
T PRK15026 458 SPDEQVHIESVGHYWTLLTELLKEI 482 (485)
T ss_pred CCCcEEEhHHHHHHHHHHHHHHHhh
Confidence 9999999999987777777777666
No 58
>PRK08554 peptidase; Reviewed
Probab=100.00 E-value=4.2e-41 Score=340.56 Aligned_cols=355 Identities=20% Similarity=0.224 Sum_probs=251.8
Q ss_pred HHHHHHHHHHhCCCCCcc------cHHHHHHHHHHHHhCCCCeeec--ccCceEEEEECCCCCcEEEEEEecccccCccc
Q 013442 51 WMVNIRRKIHENPELGFQ------EFETSKLIRAELDQMGIPYKFP--VAVTGVVGYIGTGQPPFVALRADMDALAMEES 122 (443)
Q Consensus 51 ~~i~ll~~l~~ipS~s~~------E~~~~~~l~~~l~~~G~~~~~~--~~~~~via~~~~~~~~~I~~~~H~DtVp~~~~ 122 (443)
++++++++|++|||+++. +.++++|+.++|+++||+++.. .+++++++.++++ .++|+|+||+||||+++
T Consensus 2 ~~~~~l~~LV~i~S~~~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~l~~~~~~~-~~~l~l~gH~DtVp~~~- 79 (438)
T PRK08554 2 DVLELLSSLVSFETVNDPSKGIKPSKECPKFIKDTLESWGIESELIEKDGYYAVYGEIGEG-KPKLLFMAHFDVVPVNP- 79 (438)
T ss_pred hHHHHHHHHhCCCCCCCcccCcchHHHHHHHHHHHHHHCCCeEEEEecCCceEEEEEeCCC-CCEEEEEeccccCCCCc-
Confidence 478899999999998753 4789999999999999998652 2457999998543 48999999999999976
Q ss_pred CCCccc----cCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchHHHHHHcCC--CCccc
Q 013442 123 VEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGA--LENVE 192 (443)
Q Consensus 123 ~~w~~~----~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~~~~~g~--~~~~d 192 (443)
..|.++ .++||++||||+ ||+++++++|+++|++. .++++|.|+|++||| ++.+..++++... ...+|
T Consensus 80 ~~w~~~Pf~~~~~~g~lyGrG~~DmKgg~aa~l~A~~~l~~~--~~~~~i~l~~~~dEE~g~~~~~~~~~~~~~~~~~~~ 157 (438)
T PRK08554 80 EEWNTEPFKLTVKGDKAYGRGSADDKGNVASVMLALKELSKE--PLNGKVIFAFTGDEEIGGAMAMHIAEKLREEGKLPK 157 (438)
T ss_pred cccccCCceeEEECCEEEECCcccchHHHHHHHHHHHHHHhc--CCCCCEEEEEEcccccCccccHHHHHHHHhcCCCCC
Confidence 358643 467899999996 89999999999999874 377899999999999 5555556655321 12468
Q ss_pred eeeEecCCCCCCCceEEeecCc-----------ccccc---eEEEEEEEecC-CCCCCCCCCCc--HHHHHHHHHHHHHH
Q 013442 193 AIFGLHVSSLFPVGTVASRPGP-----------TLAAG---GFFEAVINGKG-GHAAIPQHTID--PIVAASNVIVSLQH 255 (443)
Q Consensus 193 ~~i~~~~~~~~~~g~~~~~~g~-----------~~~g~---~~~~v~v~G~~-aHss~p~~g~N--Ai~~~~~~i~~l~~ 255 (443)
++|+.++....+. +..+.|. ...|. .++.+++.|.+ +|++.|..|.| |+..+++++.++..
T Consensus 158 ~~iv~Ept~~~~~--~~~~kg~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~Ha~~~~~g~~~~~i~~~~~~~~~~~~ 235 (438)
T PRK08554 158 YMINADGIGMKPI--IRRRKGFGVTIRVPSEKVKVKGKLREQTFEIRTPVVETRHAAYFLPGVDTHPLIAASHFLRESNV 235 (438)
T ss_pred EEEEeCCCCCcch--hhcCCceEEEEEecccccccccceeeeeeceeecccCccccccccCCcCchHHHHHHHHHhhcCc
Confidence 8887654322211 0001000 00122 24455555554 99998776665 58888887776654
Q ss_pred hhccc-----cC--CCCCceEEEEEEEcCC-----------------------------------cCccc---cCcEEEE
Q 013442 256 LVSRE-----AD--PLDSQVLTVAKFEGGG-----------------------------------AFNII---PDSVTIG 290 (443)
Q Consensus 256 ~~~~~-----~~--~~~~~t~~v~~i~gG~-----------------------------------~~n~v---P~~a~~~ 290 (443)
..... .. .....++++....+|. ..|++ |++|+++
T Consensus 236 ~~~~~~g~~~~~~~~~~~~~~~~~~p~~g~n~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~n~~~i~~g~a~~~ 315 (438)
T PRK08554 236 LAVSLEGKFLKGNVVPGEVTLTYLEPGEGEEVEVDLGLTRLLKAIVPLVRAPIKAEKYSDYGVSITPNVYSFAEGKHVLK 315 (438)
T ss_pred eEEEEeeeeeecCcccceeEEEEecCCCCccccccccHHHHHHHHHHHHHHhhccccccccceeeccceEEecCCeEEEE
Confidence 32100 00 1112233333333343 56666 9999999
Q ss_pred EEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcccCCHHHHHHHHHHHHHhcCCcccccCCCCCCCch
Q 013442 291 GTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTED 370 (443)
Q Consensus 291 ~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD 370 (443)
+|+|+.| .+.+++.++|++.++... .+++++++.....+.+..+.++++++.+++++++. |.++. +...+|+||
T Consensus 316 ~DiR~~~-~~~e~v~~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~~~~-g~~~~--~~~~~GgtD 389 (438)
T PRK08554 316 LDIRAMS-YSKEDIERTLKEVLEFNL--PEAEVEIRTNEKAGYLFTPPDEEIVKVALRVLKEL-GEDAE--PVEGPGASD 389 (438)
T ss_pred EEEEecC-CCHHHHHHHHHHHhhccC--CCceEEEEeccCCCCcCCCCChHHHHHHHHHHHHh-CCCcE--EEecCCchH
Confidence 9999988 688999999999886432 35555655321233344466789999999999885 87653 346789999
Q ss_pred HHHHHhh-cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 013442 371 FSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYL 425 (443)
Q Consensus 371 a~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~ 425 (443)
+++|+.. +|++. ||+.+ ..+|++|||++++++.+++++|..++.+|+
T Consensus 390 a~~~~~~Gip~v~--~Gp~~------~~~H~~~E~v~i~~l~~~~~i~~~~i~~l~ 437 (438)
T PRK08554 390 SRYFTPYGVKAID--FGPKG------GNIHGPNEYVEIDSLKKMPEVYKRIALRLL 437 (438)
T ss_pred HHHHHhcCCCceE--ECCCC------CCCCCCcceEEHHHHHHHHHHHHHHHHHHh
Confidence 9999877 99876 56332 359999999999999999999999998886
No 59
>TIGR03176 AllC allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea.
Probab=100.00 E-value=6.2e-40 Score=329.39 Aligned_cols=345 Identities=14% Similarity=0.139 Sum_probs=269.3
Q ss_pred HHHHHHHHHHHhCC-C---------CCcccHHHHHHHHHHHHhCCCCeeecccCceEEEEECCCC--CcEEEEEEecccc
Q 013442 50 YWMVNIRRKIHENP-E---------LGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQ--PPFVALRADMDAL 117 (443)
Q Consensus 50 ~~~i~ll~~l~~ip-S---------~s~~E~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~~--~~~I~~~~H~DtV 117 (443)
+.+.+.+.+|-+|- . .|..+.++++|+.+||+++|++++.+.. .|+++++++.. .|.|++.+|||||
T Consensus 3 ~~~~~~~~~~~~~~~~~~~g~~R~~~s~~~~~a~~~~~~~~~~~Gl~v~~D~~-gN~~~~~~g~~~~~~~i~~gsHlDtv 81 (406)
T TIGR03176 3 KHFRQAIEELSSFGADPAGGMTRLLYSPEWLAAQQQFKKRMAESGLETRFDDV-GNLYGRLVGTEFPEETILTGSHIDTV 81 (406)
T ss_pred HHHHHHHHHHhccCCCCCCceEeeeCCHHHHHHHHHHHHHHHHcCCEEEEcCC-CcEEEEecCCCCCCCeEEEeccccCC
Confidence 56667777777762 2 2345689999999999999999987654 59999997653 4899999999999
Q ss_pred cCcccCCCccccCCCCeeecCcchHHHHHHHHHHHHHHcccccCCceEEEEEeccCCc------cchHHHHHH-------
Q 013442 118 AMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEG------GGGAKKMLD------- 184 (443)
Q Consensus 118 p~~~~~~w~~~~~~~g~l~GrG~kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEEg------~~G~~~~~~------- 184 (443)
|.|.. .|| ..|+++.|++++.|++.+..++++|.+++..+||| ..|++.+..
T Consensus 82 ~~gG~--------~dg-------~~Gv~~~le~~~~l~~~~~~~~~~i~vi~~~~EEg~rf~~~~~Gs~~~~g~~~~~~~ 146 (406)
T TIGR03176 82 VNGGN--------LDG-------QFGALAAWLAVDYLKEKYGAPLRTVEVLSMAEEEGSRFPYVFWGSKNIFGLAKPEDV 146 (406)
T ss_pred CCCCc--------cCc-------hhhHHHHHHHHHHHHHcCCCCCCCeEEEEeccccCccCCcccccHHHHhCCCCHHHH
Confidence 96531 123 35899999999999999999999999999999995 356666542
Q ss_pred -----------------cCC--------CCccceeeEecCCCC--CC-Cce-EEeecCcccccceEEEEEEEecCCCCCC
Q 013442 185 -----------------AGA--------LENVEAIFGLHVSSL--FP-VGT-VASRPGPTLAAGGFFEAVINGKGGHAAI 235 (443)
Q Consensus 185 -----------------~g~--------~~~~d~~i~~~~~~~--~~-~g~-~~~~~g~~~~g~~~~~v~v~G~~aHss~ 235 (443)
.|+ ..++++.+.+|.+.+ .+ .|. +++ -.+++|..+++|+++|+++|+|.
T Consensus 147 ~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~elHieqG~~Le~~g~~igi--v~~~~G~~~~~v~v~GkaaHag~ 224 (406)
T TIGR03176 147 RTIEDAKGIKFVDAMHACGFDLRKAPTVRDDIKAFVELHIEQGCVLESEGQSIGV--VNAIVGQRRYTVNLKGEANHAGT 224 (406)
T ss_pred HhCcCCCCCCHHHHHHHcCCCcccccccccccceEEEEEECCCcchHHCCCeEEE--EeecccceEEEEEEEEECCCCCC
Confidence 011 013456777777543 11 122 222 24567999999999999999997
Q ss_pred CCC--CCcHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEc-CCcCccccCcEEEEEEEecCChHHHHHHHHHHHHHH
Q 013442 236 PQH--TIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEG-GGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVV 312 (443)
Q Consensus 236 p~~--g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~g-G~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~ 312 (443)
|.. +.||+..+++++..+.++..+. ....++|++.|++ |.+.|+||++|++++|+|++|..+.+.+.++|++.+
T Consensus 225 ~p~~~r~dAi~aaa~~i~~l~~~~~~~---~~~~~~tvG~I~~gg~~~NvIP~~a~~~~DiR~~~~~~~e~v~~~i~~~i 301 (406)
T TIGR03176 225 TPMSYRRDTVYAFSRICTQSIERAKEI---GDPLVLTFGKVEPVPNTVNVVPGETTFTIDCRHTDAAVLRNFTKELENDM 301 (406)
T ss_pred CCcccccCHHHHHHHHHHHHHHHHHhc---CCCcEEEEEEEEEcCCceEEECCeEEEEEEeeCCCHHHHHHHHHHHHHHH
Confidence 554 4899999999999998864321 2345899999994 789999999999999999999999999999999999
Q ss_pred HHHHHhhCCeEEEEeeccCCCCcccCCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhhcCcEEEEecCCCCCC
Q 013442 313 MKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETK 392 (443)
Q Consensus 313 ~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~~~~~ip~~~~~~G~~~~~p 392 (443)
++.+...+++++++. ....+|...|+++++.+++++++. +.+. ....++|++|+++|.+.+|+++. ||+
T Consensus 302 ~~ia~~~g~~~ei~~--~~~~~p~~~d~~lv~~l~~a~~~~-~~~~--~~~~sggg~Da~~~~~~vP~~~i-fgp----- 370 (406)
T TIGR03176 302 KAIADEMDITIDIDL--WMDEAPVPMNKEIVAIIEQLAKAE-KLNY--RLMHSGAGHDAQIFAPRVPTAMI-FVP----- 370 (406)
T ss_pred HHHHHHcCCeEEEEE--EecCCCCCCCHHHHHHHHHHHHHc-CCCc--eecCcccHHHHHHHHHHCCEEEE-EEe-----
Confidence 998888888887765 223344566889999999999887 4433 23467889999999988998664 442
Q ss_pred CCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 013442 393 GKFETGHSPYFRVNEDALPYGAALHASLATRYLL 426 (443)
Q Consensus 393 G~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~~ 426 (443)
+.....|+|||+++++++..++++|+.++.+++.
T Consensus 371 ~~~g~~H~p~E~v~~e~l~~g~~vl~~~l~~l~~ 404 (406)
T TIGR03176 371 SIGGISHNPAERTNIEDLVEGVKTLADMLYELAY 404 (406)
T ss_pred CCCCCCCCccccCCHHHHHHHHHHHHHHHHHHhc
Confidence 2224589999999999999999999999999875
No 60
>KOG2275 consensus Aminoacylase ACY1 and related metalloexopeptidases [Amino acid transport and metabolism]
Probab=100.00 E-value=2.2e-40 Score=314.44 Aligned_cols=360 Identities=16% Similarity=0.183 Sum_probs=274.5
Q ss_pred HHHHHHHHHHHhCCCCCccc--H-HHHHHHHHHHHhCCCCeee---cccCceEEEEECCC-C-CcEEEEEEecccccCcc
Q 013442 50 YWMVNIRRKIHENPELGFQE--F-ETSKLIRAELDQMGIPYKF---PVAVTGVVGYIGTG-Q-PPFVALRADMDALAMEE 121 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~~E--~-~~~~~l~~~l~~~G~~~~~---~~~~~~via~~~~~-~-~~~I~~~~H~DtVp~~~ 121 (443)
...+..+|+.+|||++-++- . .+++|+..+.+.+|..++. ....++++.+|.|+ + -++|+|++|+||||+-.
T Consensus 25 ~~~v~~f~eylRi~Tv~p~~dy~~a~~~Fl~~~a~~l~l~~~~i~~~p~~~~~l~T~~GS~P~L~silL~SH~DVVP~f~ 104 (420)
T KOG2275|consen 25 NISVTRFREYLRIPTVQPNPDYTIACADFLKKYAKSLGLTVQKIESEPGKYVLLYTWLGSDPELPSILLNSHTDVVPVFR 104 (420)
T ss_pred chHHHHHHHHhhccccccCCCccHHHHHHHHHHHHhcCCceeEEEecCceeEEEEEeeCCCCCccceeeeccccccCCCc
Confidence 55778899999999997543 3 7899999999999998754 34578899999765 3 38999999999999877
Q ss_pred cCCCccc-----cCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-c-cchHHHHHHcCCCCcc
Q 013442 122 SVEWEHK-----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-G-GGGAKKMLDAGALENV 191 (443)
Q Consensus 122 ~~~w~~~-----~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g-~~G~~~~~~~g~~~~~ 191 (443)
+ .|+++ ..++|.|||||+ |+..+++|.|++.|+..+.++.++|.+.|++||| + ..|++.+.+...+.+.
T Consensus 105 e-~W~h~Pfsa~~~~~g~IyaRGaqD~K~~~va~leAir~L~~~g~kp~Rti~lsfvpDEEi~G~~Gm~~fa~~~~~~~l 183 (420)
T KOG2275|consen 105 E-KWTHPPFSAFKDEDGNIYARGAQDMKCVGVAYLEAIRNLKASGFKPKRTIHLSFVPDEEIGGHIGMKEFAKTEEFKKL 183 (420)
T ss_pred c-cCccCCccccccCCCcEEeccccchHhHHHHHHHHHHHHHhcCCCcCceEEEEecCchhccCcchHHHHhhhhhhccc
Confidence 5 89866 246899999998 8999999999999999999999999999999999 4 4899998874455554
Q ss_pred ceeeEecCCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHHhhccc---------cC
Q 013442 192 EAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSRE---------AD 262 (443)
Q Consensus 192 d~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~~~~~~---------~~ 262 (443)
...++++-. + ++.....+++.++||.+|++|++.|+++|||+|.. ..|+..+..++.++.++.... ..
T Consensus 184 ~~~filDEG-~-~se~d~~~vfyaEkg~w~~~v~~~G~~GHss~~~~-nTa~~~l~klv~~~~~fr~~q~~~l~~~p~~~ 260 (420)
T KOG2275|consen 184 NLGFILDEG-G-ATENDFATVFYAEKGPWWLKVTANGTPGHSSYPPP-NTAIEKLEKLVESLEEFREKQVDLLASGPKLA 260 (420)
T ss_pred ceeEEecCC-C-CCcccceeEEEEeeceeEEEEEecCCCCCCCCCCC-ccHHHHHHHHHHHHHHhHHHHHHHhhcCCcee
Confidence 444444321 1 12111245567899999999999999999997321 245666666666666554111 11
Q ss_pred CCCCceEEEEEEEcCCcCccccCcEEEEEEEecCChHHHHHHHHHH-HHHHHHHHHhhCCeEEEEeecc--CCCCcc---
Q 013442 263 PLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRI-EEVVMKQASVQRCNATVTFDDK--SFYPVT--- 336 (443)
Q Consensus 263 ~~~~~t~~v~~i~gG~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i-~~~~~~~~~~~~~~~~v~~~~~--~~~~~~--- 336 (443)
..+.+|+|++.|+||.+.|++|...++.+|+|+.|..+..++++++ +++.++ .+-.+++++... ..+++.
T Consensus 261 ~~~vtT~Nv~~i~GGv~~N~~P~~~ea~~dirv~~~~d~~~i~~~l~~~w~~~----~~eg~t~~f~~~~~~~~~~~t~~ 336 (420)
T KOG2275|consen 261 LGDVTTINVGIINGGVQSNVLPETFEAAFDIRVRPHVDVKAIRDQLEDEWAEE----AGEGVTLEFSQKVILDYPPVTPT 336 (420)
T ss_pred ccceeEEeeeeeecccccCcCchhheeeeeeEeccCCCHHHHHHHHHHHhhhh----cCCceEEeccCcccCCCCCCCCC
Confidence 2457899999999999999999999999999999999999999999 666554 333344544321 133332
Q ss_pred cCCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhh-cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHH
Q 013442 337 VNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAA 415 (443)
Q Consensus 337 ~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~ 415 (443)
..+.++...+..+.++. +.+.. +...+|+||.+++++. +|..-+ .+..+. ....|.-||++..+.+.++++
T Consensus 337 ~~s~p~w~~~~~a~~~~-~~k~~--~~i~~gstdsr~~rn~gvp~~~f-sp~~nt----~~~~H~hnE~l~~~~~l~gi~ 408 (420)
T KOG2275|consen 337 DDSNPFWTAFAGALKDE-GGKGY--PEIGPGSTDSRHIRNEGVPAIGF-SPIINT----PMLLHDHNEFLNEKVFLRGIE 408 (420)
T ss_pred CCCChHHHHHHHHHHHh-cCccc--eeecccccccchhhhcCcchhcc-cccccc----cceecchhhhhCchhhhhhhh
Confidence 33457888888888887 44442 4568899999999988 886543 333332 367999999999999999999
Q ss_pred HHHHHHHHHH
Q 013442 416 LHASLATRYL 425 (443)
Q Consensus 416 ~~a~~~~~l~ 425 (443)
+|..++..+.
T Consensus 409 ~~~~~i~~~~ 418 (420)
T KOG2275|consen 409 IYYTIIVNLA 418 (420)
T ss_pred HHHHHHHhhc
Confidence 9999776654
No 61
>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional
Probab=100.00 E-value=9.3e-39 Score=333.48 Aligned_cols=349 Identities=15% Similarity=0.165 Sum_probs=274.9
Q ss_pred hHHHHHHHHHHHHhCCC-------------CCcccHHHHHHHHHHHHhCCCC-eeecccCceEEEEECCC--CCcEEEEE
Q 013442 48 IFYWMVNIRRKIHENPE-------------LGFQEFETSKLIRAELDQMGIP-YKFPVAVTGVVGYIGTG--QPPFVALR 111 (443)
Q Consensus 48 ~~~~~i~ll~~l~~ipS-------------~s~~E~~~~~~l~~~l~~~G~~-~~~~~~~~~via~~~~~--~~~~I~~~ 111 (443)
+.+.+++.+..|.+|+. .|..+.++++|+.+||+++|++ ++++.. .|+++++++. +.|.|++.
T Consensus 179 ~~~r~~~~l~~l~~~~~~~~~~~~g~~R~~~s~~~~~~~~~~~~~~~~~Gl~~v~~D~~-gNv~~~~~g~~~~~p~v~~g 257 (591)
T PRK13799 179 IGADVMDWAEDIAAHSDPGYADEGALTCTYLSDAHRACANQISDWMRDAGFDEVEIDAV-GNVVGRYKAADDDAKTLITG 257 (591)
T ss_pred HHHHHHHHHHHHHhccCCCCCCCCceEeeeCCHHHHHHHHHHHHHHHHcCCCeEeECCC-CCEEEEcCCCCCCCCeEEEe
Confidence 33667888888999862 1234578999999999999998 987654 6999999764 35999999
Q ss_pred EecccccCcccCCCccccCCCCeeecCcchHHHHHHHHHHHHHHcccccCCceEEEEEeccCCcc------chHHHHH--
Q 013442 112 ADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGG------GGAKKML-- 183 (443)
Q Consensus 112 ~H~DtVp~~~~~~w~~~~~~~g~l~GrG~kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEEg~------~G~~~~~-- 183 (443)
+|+||||. +|+++|+ .|++++|.+++.|++.+..++++|.|+..++|||. .|++.+.
T Consensus 258 SHlDTV~~------------gG~~DG~---~Gv~a~l~~~~~l~~~~~~~~~~i~vi~~~~EEg~rF~~~~~GS~~~~G~ 322 (591)
T PRK13799 258 SHYDTVRN------------GGKYDGR---EGIFLAIACVKELHEQGERLPFHFEVIAFAEEEGQRFKATFLGSGALIGD 322 (591)
T ss_pred ccccccCC------------CCccccH---HHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCccCCCccccchHHHhCC
Confidence 99999984 4778777 69999999999999999999999999999999962 4666554
Q ss_pred ------H----cCC---------------C-------CccceeeEecCCCC---CCCc-eEEeecCcccccceEEEEEEE
Q 013442 184 ------D----AGA---------------L-------ENVEAIFGLHVSSL---FPVG-TVASRPGPTLAAGGFFEAVIN 227 (443)
Q Consensus 184 ------~----~g~---------------~-------~~~d~~i~~~~~~~---~~~g-~~~~~~g~~~~g~~~~~v~v~ 227 (443)
+ +|. . .++++.+.+|++.+ +..| .++ ...+++|..+++|+++
T Consensus 323 ~~~~~~~~~d~~G~~~~~~l~~~g~~~~~~~~~~~~~~~~~a~~ElHIEQgp~Le~~~~~ig--vV~g~~G~~~~~Itv~ 400 (591)
T PRK13799 323 FNMELLDIKDADGISLREAIQHAGHCIDAIPKIARDPADVLGFIEVHIEQGPVLLELDIPLG--IVTSIAGSARYICEFI 400 (591)
T ss_pred ChHHHHhccCCCCCCHHHHHHHcCCChhhccccccCCCCccEEEEEEeCCCHHHHHCCCcEE--EEeeeccceEEEEEEE
Confidence 1 121 0 13446677776664 1111 122 2245689999999999
Q ss_pred ecCCCCCC-CC-CCCcHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEcC-CcCccccCcEEEEEEEecCChHHHHHH
Q 013442 228 GKGGHAAI-PQ-HTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGG-GAFNIIPDSVTIGGTFRAFSKESIIQL 304 (443)
Q Consensus 228 G~~aHss~-p~-~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gG-~~~n~vP~~a~~~~diR~~~~~~~~~v 304 (443)
|+++|+|. |. .+.||+..+++++..++++..+. +....+++++.|+++ .+.|+||++|++++|+|+.+..+.+.+
T Consensus 401 GkaaHag~~Pm~~r~dAi~aaa~ii~~l~~~~~~~--~~~~~v~tVG~I~~~~ga~NvIP~~a~~~~DiR~~~~e~~e~l 478 (591)
T PRK13799 401 GMASHAGTTPMDMRKDAAAAAAEIALYIEKRAAQD--QHASLVATMGQLNVPSGSTNVIPGRCQFSLDIRAATDEIRDAA 478 (591)
T ss_pred EECCCCCCCChhhchhHHHHHHHHHHHHHHHHHhc--CCCCcEEEEEEEEecCCCCceECCEEEEEEEeeCCCHHHHHHH
Confidence 99999995 53 58999999999999999875432 223357899999863 489999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhCCeEEEEeeccCCCCcccCCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhhcCcEEEE
Q 013442 305 KQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYY 384 (443)
Q Consensus 305 ~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~~~~~ip~~~~~ 384 (443)
.++|++.+++.+...++.+++++ ....++..+|+++++.+.+++++. |.+.. ...+++++|+++|.+..|..+++
T Consensus 479 ~~~i~~~i~~ia~~~g~~~ei~~--~~~~~~~~~d~~lv~~~~~a~~~~-G~~~~--~~~sgag~Da~~~a~~~p~amif 553 (591)
T PRK13799 479 VADILAEIAAIAARRGIEYKAEL--AMKAAAAPCAPELMKQLEAATDAA-GVPLF--ELASGAGHDAMKIAEIMDQAMLF 553 (591)
T ss_pred HHHHHHHHHHHHHHhCCeEEEEE--EecCCCcCCCHHHHHHHHHHHHHc-CCCce--ecCcchHHHHHHHHhhCCEEEEE
Confidence 99999999998888888887776 455677788899999999888775 87653 24678899999999887766554
Q ss_pred ecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 013442 385 LGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLL 426 (443)
Q Consensus 385 ~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~~ 426 (443)
.+.. ....+|+||||++++++..++++|..++..+..
T Consensus 554 ~~~g-----~~g~sHsp~E~v~~edL~~g~~vl~~~l~~l~~ 590 (591)
T PRK13799 554 TRCG-----NAGISHNPLESMTADDMELSADAFLDFLNNFAE 590 (591)
T ss_pred EecC-----CCCCCCCccccCCHHHHHHHHHHHHHHHHHHhh
Confidence 4422 223589999999999999999999999988763
No 62
>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional
Probab=100.00 E-value=1.7e-38 Score=331.80 Aligned_cols=346 Identities=14% Similarity=0.142 Sum_probs=271.4
Q ss_pred hHHHHHHHHHHHHhCCCC-------------CcccHHHHHHHHHHHHhCCC-CeeecccCceEEEEECCC-C-CcEEEEE
Q 013442 48 IFYWMVNIRRKIHENPEL-------------GFQEFETSKLIRAELDQMGI-PYKFPVAVTGVVGYIGTG-Q-PPFVALR 111 (443)
Q Consensus 48 ~~~~~i~ll~~l~~ipS~-------------s~~E~~~~~~l~~~l~~~G~-~~~~~~~~~~via~~~~~-~-~~~I~~~ 111 (443)
+.+.+.+.+.+|-+|+.. |..+.++++|+.+||+++|+ +++++. -.|+++++++. + .|.|++.
T Consensus 179 ~~~r~~~~~~~l~~~~~~~~~~~~g~~R~~~s~~~~~~~~~l~~~~~~~Gl~~v~~D~-~GNl~~~~~g~~~~~~~v~~g 257 (591)
T PRK13590 179 LGNDVWDWAERLAAHSDPGYAEKGQLTVTYLTDAHRACAQQISHWMRDCGFDEVHIDA-VGNVVGRYKGSTPQAKRLLTG 257 (591)
T ss_pred HHHHHHHHHHHHhcccCCCCCCCCceeeeeCCHHHHHHHHHHHHHHHHcCCCeeeECC-CCCEEEEecCCCCCCCeEEEe
Confidence 336678888888888652 33457899999999999999 887754 46999999764 3 3899999
Q ss_pred EecccccCcccCCCccccCCCCeeecCcchHHHHHHHHHHHHHHcccccCCceEEEEEeccCCc------cchHHH----
Q 013442 112 ADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEG------GGGAKK---- 181 (443)
Q Consensus 112 ~H~DtVp~~~~~~w~~~~~~~g~l~GrG~kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEEg------~~G~~~---- 181 (443)
+||||||.+ |+.+|+ +|++++|.+++.|++.+..++++|.|++.+|||+ ..|++.
T Consensus 258 sHlDTV~~g------------G~~DG~---~Gv~a~lea~~~l~~~~~~~~~~i~vv~~~~EEg~rF~~~~~GS~~~~G~ 322 (591)
T PRK13590 258 SHYDTVRNG------------GKYDGR---LGIFVPMACVRELHRQGRRLPFGLEVVGFAEEEGQRYKATFLGSGALIGD 322 (591)
T ss_pred cccccCCCC------------CCcccH---HHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCccccCCccccchHHHhCC
Confidence 999999854 555553 7999999999999999988899999999999996 346664
Q ss_pred ----HHH---------------cCC----C-------CccceeeEecCCCCC---CCc-eEEeecCcccccceEEEEEEE
Q 013442 182 ----MLD---------------AGA----L-------ENVEAIFGLHVSSLF---PVG-TVASRPGPTLAAGGFFEAVIN 227 (443)
Q Consensus 182 ----~~~---------------~g~----~-------~~~d~~i~~~~~~~~---~~g-~~~~~~g~~~~g~~~~~v~v~ 227 (443)
+++ .|+ + +.+.+.+.+|.+++. ..| .+.+ ..+++|..+++|+++
T Consensus 323 ~~~~~~~~~d~~g~~~~~al~~~g~~~~~~~~~~~~~~~~~a~~ElHiEqg~~Le~~~~~~gv--V~~~~G~~~~~v~v~ 400 (591)
T PRK13590 323 FDPAWLDQKDADGITMREAMQHAGLCIDDIPKLRRDPARYLGFVEVHIEQGPVLNELDLPLGI--VTSINGSVRYVGEMI 400 (591)
T ss_pred ChHHHHhccCCCCCCHHHHHHHcCCChhhccccccCCCCccEEEEEEeCCCHHHHHCCCceEE--EeeeeccEEEEEEEE
Confidence 222 111 0 134466777776541 011 1111 134679999999999
Q ss_pred ecCCCCCC-CCC-CCcHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEc-CCcCccccCcEEEEEEEecCChHHHHHH
Q 013442 228 GKGGHAAI-PQH-TIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEG-GGAFNIIPDSVTIGGTFRAFSKESIIQL 304 (443)
Q Consensus 228 G~~aHss~-p~~-g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~g-G~~~n~vP~~a~~~~diR~~~~~~~~~v 304 (443)
|+++|+|. |.. +.||+..+++++..++++... ....+.+++.|++ |.+.|+||++|++++|+|+.+..+.+.+
T Consensus 401 GkaaHag~~P~~~r~dAi~aaa~~i~~l~~~~~~----~~~~v~tVG~i~~~Gg~~NVIP~~a~~~iDiR~~~~e~~e~v 476 (591)
T PRK13590 401 GMASHAGTTPMDRRRDAAAAVAELALYVEQRAAQ----DGDSVGTVGMLEVPGGSINVVPGRCRFSLDIRAPTDAQRDAM 476 (591)
T ss_pred eECCCCCCCCchhcccHHHHHHHHHHHHHHHHhc----CCCcEEEEEEEEECCCCCceECCEEEEEEEeeCCCHHHHHHH
Confidence 99999995 544 789999999999999886422 1234679999874 5689999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhCCeEEEEeeccCCCCcccCCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhhcCcEEEE
Q 013442 305 KQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYY 384 (443)
Q Consensus 305 ~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~~~~~ip~~~~~ 384 (443)
.++|++.+++.+...++.++++. ....++..+|+++++.+.++++++ |.+.. ...++|++|+++|...+|..++
T Consensus 477 ~~~i~~~i~~ia~~~g~~vei~~--~~~~~~~~~d~~lv~~~~~aa~~~-G~~~~--~~~sggg~Da~~~a~~~p~~mi- 550 (591)
T PRK13590 477 VADVLAELEAICERRGLRYTLEE--TMRAAAAPSAPAWQQRWEAAVAAL-GLPLF--RMPSGAGHDAMKLHEIMPQAML- 550 (591)
T ss_pred HHHHHHHHHHHHHHcCCeEEEEE--eecCCCcCCCHHHHHHHHHHHHHc-CCCcc--cCCcchhHHHHHHHHHCCEEEE-
Confidence 99999999998888888888876 456677788999999999999885 87653 3467899999999988885543
Q ss_pred ecCCCCCCCC-CCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 013442 385 LGMNDETKGK-FETGHSPYFRVNEDALPYGAALHASLATRYLL 426 (443)
Q Consensus 385 ~G~~~~~pG~-~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~~ 426 (443)
|| ||. ...+|+||||++++++.+++++|..++..++.
T Consensus 551 fg-----pg~~~g~sH~p~E~v~~edL~~g~~vl~~ll~~l~~ 588 (591)
T PRK13590 551 FV-----RGENAGISHNPLESSTADDMQLAVQAFQHLLDQLAA 588 (591)
T ss_pred EE-----eeCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHhh
Confidence 44 232 24589999999999999999999999998874
No 63
>KOG2276 consensus Metalloexopeptidases [Amino acid transport and metabolism]
Probab=100.00 E-value=7.4e-37 Score=287.19 Aligned_cols=374 Identities=17% Similarity=0.212 Sum_probs=285.9
Q ss_pred hHHHHhhcCchhHHHHHHHHHHHHhCCCCCccc------HHHHHHHHHHHHhCCCCeeec-------------ccCceEE
Q 013442 37 VKFLDFAKKPEIFYWMVNIRRKIHENPELGFQE------FETSKLIRAELDQMGIPYKFP-------------VAVTGVV 97 (443)
Q Consensus 37 ~~~~~~~~~~~~~~~~i~ll~~l~~ipS~s~~E------~~~~~~l~~~l~~~G~~~~~~-------------~~~~~vi 97 (443)
.++.+.|+.++ +++++.|++.++|+|+|... .++++|++++|+++|-+++.. ...+.+.
T Consensus 5 ~~~fq~id~~~--de~~~~L~e~v~iqsvs~dp~~r~~v~rm~~~~~~~l~~lG~~~~l~dlg~q~~~~g~~v~lPpvvl 82 (473)
T KOG2276|consen 5 TKVFQSIDLNK--DEFINTLREAVAIQSVSADPTKRLEVRRMADWLRDYLTKLGAPLELVDLGYQSLPDGQIVPLPPVVL 82 (473)
T ss_pred HHHHHHhhccH--HHHHHHHHHHhcccccccCccccHHHHHHHHHHHHHHHHhCCceeeeecccCCCCCCcccccChhhh
Confidence 47889999999 99999999999999999654 678999999999999776651 1245678
Q ss_pred EEECCCC-CcEEEEEEecccccCcccCCCccc----cCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEE
Q 013442 98 GYIGTGQ-PPFVALRADMDALAMEESVEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVF 169 (443)
Q Consensus 98 a~~~~~~-~~~I~~~~H~DtVp~~~~~~w~~~----~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~ 169 (443)
+++++.+ .++++++|||||+|++.+++|.++ +++||+|||||+ ||++++.+.|++++++.+..++.+|+|+|
T Consensus 83 ~~~Gsdp~KktvlvYgHlDVqpA~~~DgW~TdPF~Lt~~~GkL~GRG~TDdkGPv~~wi~av~a~~~~g~~lpvnv~f~~ 162 (473)
T KOG2276|consen 83 GVLGSDPSKKTVLVYGHLDVQPANLEDGWNTDPFTLTEDDGKLFGRGATDDKGPVLSWIHAVKALQQLGIDLPVNVVFVF 162 (473)
T ss_pred hcccCCCCcceEEEEeeeeeeecCCCCCCcCCCeEEEEECCEEeccCcCCCCccchHHHHHHHHHHHhCccccceEEEEE
Confidence 8887765 489999999999999999999755 788999999998 79999999999999999999999999999
Q ss_pred eccCC-ccchHHHHHHc---CCCCccceeeEecCCCCCCCceEEeecCc--ccccceEEEEEEEe--cCCCCC-CCCCCC
Q 013442 170 QPAEE-GGGGAKKMLDA---GALENVEAIFGLHVSSLFPVGTVASRPGP--TLAAGGFFEAVING--KGGHAA-IPQHTI 240 (443)
Q Consensus 170 ~~dEE-g~~G~~~~~~~---g~~~~~d~~i~~~~~~~~~~g~~~~~~g~--~~~g~~~~~v~v~G--~~aHss-~p~~g~ 240 (443)
.+-|| |+.|...++++ .++.++|++.+-+... .|+ -+|+. +.+|...|.++|+| +..||+ ....-.
T Consensus 163 EgmEEsgS~~L~~l~~~~kD~~~~~vD~vciSdnyW---lg~--kkPcltyGlRG~~yf~i~v~g~~~DlHSGvfGG~~h 237 (473)
T KOG2276|consen 163 EGMEESGSEGLDELIEKEKDKFFKDVDFVCISDNYW---LGT--KKPCLTYGLRGVIYFQIEVEGPSKDLHSGVFGGVVH 237 (473)
T ss_pred EechhccCccHHHHHHHHhhhhhccCCEEEeeCcee---ccC--CCcccccccccceeEEEEEeecccccccccccchhH
Confidence 99999 88888888764 3566889887643221 121 12221 23599999999999 788999 343444
Q ss_pred cHHHHHHHHHHHHHHhhccc----------------------cC---------------C-----------CCCceEEEE
Q 013442 241 DPIVAASNVIVSLQHLVSRE----------------------AD---------------P-----------LDSQVLTVA 272 (443)
Q Consensus 241 NAi~~~~~~i~~l~~~~~~~----------------------~~---------------~-----------~~~~t~~v~ 272 (443)
-|+..+..++..|.+...+. .+ + =..+++.+.
T Consensus 238 E~m~dL~~~ms~Lv~~~~~Ilipgiy~~vaplteeE~~~y~~I~f~~~e~~~~tg~~~l~~~~k~~~l~~rWryPSLsih 317 (473)
T KOG2276|consen 238 EAMNDLVLVMSSLVDIQGRILIPGIYEDVAPLTEEEDSIYDDIDFDVEEFKEATGSQMLPTDDKKRILMHRWRYPSLSIH 317 (473)
T ss_pred HHHHHHHHHHHHhcCcCCcEeccchhhhccCCChHHHhhhhcceeeHhhhhccccccccccCchHHHhhhhcccCcccee
Confidence 67777777777765433221 00 0 013477777
Q ss_pred EEEc----CCcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcc--cCCHHHHHHH
Q 013442 273 KFEG----GGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVT--VNNKNLHEHF 346 (443)
Q Consensus 273 ~i~g----G~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~d~~~~~~~ 346 (443)
.|.| ..+..+||..+.-+|.+|+.|.++.+.+.+.+.++++...++.+..-+++.....+..++ +.+++-+.++
T Consensus 318 gIeGaFs~pG~kTVIP~kVigkfSiRlVP~md~e~verlv~~yl~~~f~~~nS~N~l~~~~~~~~~~Wv~d~~~~~y~a~ 397 (473)
T KOG2276|consen 318 GIEGAFSGPGAKTVIPAKVVGKFSIRLVPNMDPEQVERLVTRYLEKVFAELNSPNKLKVSMGHAGAPWVSDPDDPHYLAL 397 (473)
T ss_pred cccceeeCCCceEEeehhheeeeEEEecCCCCHHHHHHHHHHHHHHHHHhcCCCCceEEeecCCCCceecCCCchhHHHH
Confidence 7775 357889999999999999999999999999999999988777765433332224444444 4456778889
Q ss_pred HHHHHHhcCCcccccCCCCCCCchHHH-HHhh--cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH
Q 013442 347 QKVAADMLGVQNIKENRPLMGTEDFSF-FAEA--IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATR 423 (443)
Q Consensus 347 ~~~~~~~~g~~~~~~~~~~~g~tDa~~-~~~~--ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~ 423 (443)
++|.+.++|.++ .....+|+-.... |... -|.+...+|... .++|+.||++++.++.++.+++++++.+
T Consensus 398 krA~~~v~gveP--d~~ReGgSIPvt~tfQ~~~~~~V~llP~G~~d------D~aHsqNEkl~i~N~~~G~k~l~ay~~e 469 (473)
T KOG2276|consen 398 KRAIETVYGVEP--DFTREGGSIPVTLTFQDITGKSVLLLPYGASD------DGAHSQNEKLNITNYVEGTKVLAAYISE 469 (473)
T ss_pred HHHHHHhhCCCC--CccccCCccceehHHHHHhCCCeEEecccccc------cchhhhcccccHHHHhhhHHHHHHHHHH
Confidence 999999999887 3445666655443 4444 343444444333 4699999999999999999999999988
Q ss_pred HH
Q 013442 424 YL 425 (443)
Q Consensus 424 l~ 425 (443)
+.
T Consensus 470 l~ 471 (473)
T KOG2276|consen 470 LA 471 (473)
T ss_pred Hh
Confidence 75
No 64
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism]
Probab=99.93 E-value=8.4e-25 Score=214.73 Aligned_cols=350 Identities=17% Similarity=0.157 Sum_probs=265.4
Q ss_pred HHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCe-eec----------ccCceEEEEECCC-C-CcEEEEEEeccc
Q 013442 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPY-KFP----------VAVTGVVGYIGTG-Q-PPFVALRADMDA 116 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~-~~~----------~~~~~via~~~~~-~-~~~I~~~~H~Dt 116 (443)
+++++.+.++++||+.|..|.+++.++.+|++..|+.+ ... .+...+.+.+.+. + -|.+.|.+|+||
T Consensus 5 ~~l~~~F~~~~kI~~~S~~e~~~~p~~~~~~k~~~~~v~dE~~~i~~~~~a~~~~~~~~~~L~a~~d~V~~i~~~sh~Dt 84 (414)
T COG2195 5 ERLLDRFLELVKIPTQSKHEKAVAPSTVGQAKLLGLLVEDELGNIGLKKPATAGENYVPAVLQAHLDMVPEIGFISHHDT 84 (414)
T ss_pred HHHHHHHHHHeeCCCCCCCccccccccHHHHHHcCchhhhhhccccccccccCCCCeeeEEeeccccccccccccccccc
Confidence 77999999999999999999999999999999999998 221 1112355656554 2 388999999999
Q ss_pred ccCcc----cCCCc----------------------ccc----------CCCC-eeecCcchHHHHHHHHHHHHHHccc-
Q 013442 117 LAMEE----SVEWE----------------------HKS----------KVPG-KMHACGHDAHVAMLLGAAKMLQVFR- 158 (443)
Q Consensus 117 Vp~~~----~~~w~----------------------~~~----------~~~g-~l~GrG~kg~~a~~l~a~~~l~~~~- 158 (443)
+|-.. ..+|. ++. ..+| .+-|-.+|++++.++.++..+++..
T Consensus 85 ~~d~~~~~v~~~~l~~~~Gad~i~~~~~~a~L~~~~~P~~~~~t~~~ei~~dGa~LLgaD~kAGia~i~~al~~~~~~~~ 164 (414)
T COG2195 85 VPDPIGPNVNPQILKATLGADNIGLAIGLAVLSPEHFPLEVLLTGDEEITTDGATLLGADDKAGIAEIMTALSVLREKHP 164 (414)
T ss_pred cccccccccCCceeeeccCcchhhhhhHHhhcCcccCCceeeeecceEEeccCccccCCcchhHHHHHHHHHHHHhhcCc
Confidence 95211 11220 110 0122 2233334799999999999999653
Q ss_pred ccCCceEEEEEeccCC-ccchHHHHHHcCCCCccceeeEecCCCCCCCceEEeecCcccccceEEEEEEEecCCCCC-CC
Q 013442 159 HEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAA-IP 236 (443)
Q Consensus 159 ~~l~~~i~~i~~~dEE-g~~G~~~~~~~g~~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss-~p 236 (443)
..+.++|++.|+++|| ++.|+..+.-... .++..+.. + +.+.|.+.+.. .+...+++++.|+.+|++ .+
T Consensus 165 ~i~h~~i~~g~s~~Ee~g~rg~~~~~~a~f--~a~~ay~i--D-Gg~~g~i~~ea----~~~~~~~~~~~g~~~h~~~a~ 235 (414)
T COG2195 165 EIPHGGIRGGFSPDEEIGGRGAANKDVARF--LADFAYTL--D-GGPVGEIPREA----FNAAAVRATIVGPNVHPGSAK 235 (414)
T ss_pred cccccCeEEEecchHHhhhhhhhhccHHhh--hcceeEec--C-CCccCeeeeec----cchheeeeeeeccCcCccchH
Confidence 3678999999999999 6688887743211 23444443 3 44667765442 256789999999999999 57
Q ss_pred CCCCcHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEcCCcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHH
Q 013442 237 QHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQA 316 (443)
Q Consensus 237 ~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gG~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~ 316 (443)
...+||+..+.+++..+.... ....++.+.+..+++...|.|.+++.....+|.......+.....+++.+.+.+
T Consensus 236 ~~~i~a~~~a~e~~~~~~~~~-----~~e~t~~~~Gv~~~~~~~~~V~~~s~~~~~iR~~d~~~~~s~~~~~~~~~~~~~ 310 (414)
T COG2195 236 GKMINALLLAAEFILELPLEE-----VPELTEGPEGVYHLGDSTNSVEETSLNLAIIRDFDNLLFRARKDSMKDVVEEMA 310 (414)
T ss_pred HHHhhHHHhhhhhhhcCCccc-----ccccccccceEEeccccccchhhhhhhhhhhhhcchhHHHHhHHHHHHHHHHHH
Confidence 788999998888887765321 112456778888999999999999999999999999888888889999998888
Q ss_pred HhhC--CeEEEEeeccCCCCcc--cCCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhh-cCcEEEEecCCCCC
Q 013442 317 SVQR--CNATVTFDDKSFYPVT--VNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDET 391 (443)
Q Consensus 317 ~~~~--~~~~v~~~~~~~~~~~--~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~~~~~-ip~~~~~~G~~~~~ 391 (443)
++.+ ..++++. ...||.+ ..++.++..++++++++ +.++. .....|++|++.++.. +|+.+++.|| .
T Consensus 311 ~~~g~~~~~~~~~--~~~Yp~~~~~~~~~iv~~a~~a~~~l-~~~p~--v~~i~gGtd~~~is~~g~p~~~i~~Gp-~-- 382 (414)
T COG2195 311 ASLGKLAGAELEV--KDSYPGWKIKPDSPLVDLAKKAYKEL-GIKPK--VKPIHGGTDGGVLSFKGLPTPNISTGP-G-- 382 (414)
T ss_pred HHhhhccceEEEE--eccccCcCCCCCchHHHHHHHHHHHh-CCCce--EEEeecccchhhhhccCCCCceEeccc-c--
Confidence 8777 6777776 6677766 34577999999999999 55553 4578999999999888 8888888995 3
Q ss_pred CCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 013442 392 KGKFETGHSPYFRVNEDALPYGAALHASLATRYL 425 (443)
Q Consensus 392 pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~ 425 (443)
.+.|+++|++++++++++.+++..++..+.
T Consensus 383 ----~n~Hs~~E~v~I~s~ek~~~~l~~l~~~~~ 412 (414)
T COG2195 383 ----ENPHSPDEFVSIESMEKAVQVLVELLKLAA 412 (414)
T ss_pred ----cCCCCccceeehHHHHHHHHHHHHHHHHhh
Confidence 359999999999999999999888876653
No 65
>PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of proteins contains the metallopeptidases and non-peptidase homologues (amidohydrolases) that belong to the MEROPS peptidase family M20 (clan MH) []. The peptidases of this clan have two catalytic zinc ions at the active site, bound by His/Asp, Asp, Glu, Asp/Glu and His. The catalysed reaction involves the release of an N-terminal amino acid, usually neutral or hydrophobic, from a polypeptide []. The peptidase M20 family has four sub-families: M20A - type example, glutamate carboxypeptidase from Pseudomonas sp. RS16 (P06621 from SWISSPROT) M20B - type example, peptidase T from Escherichia coli (P29745 from SWISSPROT) M20C - type example, X-His dipeptidase from E. coli (P15288 from SWISSPROT) M20D - type example, carboxypeptidase Ss1 from Sulfolobus solfataricus (P80092 from SWISSPROT) ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3T68_A 3T6M_A 2F8H_A 3GB0_A 3IO1_B 2ZOF_A 2ZOG_B 3MRU_B 3N5F_A 1Z2L_B ....
Probab=99.88 E-value=2.6e-22 Score=180.78 Aligned_cols=175 Identities=29% Similarity=0.401 Sum_probs=131.9
Q ss_pred EEEEecccccCcccCCCccc----cCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccc-hH
Q 013442 109 ALRADMDALAMEESVEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGG-GA 179 (443)
Q Consensus 109 ~~~~H~DtVp~~~~~~w~~~----~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~-G~ 179 (443)
+|++|||||| + ..+|+++ .+++|++||||+ |++++++++|++.|++.+..++++|.|+|+++|| ++. |+
T Consensus 1 ll~~H~Dtv~-~-~~~w~~~pf~~~~~~~~~~grG~~D~k~~~~~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~g~ 78 (189)
T PF01546_consen 1 LLYAHMDTVP-G-PEGWKHDPFELSIEDGRLYGRGADDMKGGIAAMLAALKALKESGDDLPGNIIFLFTPDEEIGSIGGA 78 (189)
T ss_dssp EEEEES-BCS-T-GGGSSSSTTSEEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTTTCSSEEEEEEESTCCGTSTTHH
T ss_pred CccccccccC-C-cCcCCCCCcccEEECCEEEcCCcCCCcccHHHHHHHHHHHHhccccccccccccccccccCCCcchh
Confidence 6899999999 5 6789755 678899999998 7999999999999998888999999999999999 555 99
Q ss_pred HHHHHcCCCC--ccceeeEecCCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHHhh
Q 013442 180 KKMLDAGALE--NVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLV 257 (443)
Q Consensus 180 ~~~~~~g~~~--~~d~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~~~ 257 (443)
+++++++... .+|..+..+ ++.. +...
T Consensus 79 ~~l~~~~~~~~~~~~~~~~~e-----~~~~----------~~~~------------------------------------ 107 (189)
T PF01546_consen 79 KHLLEEGAFFGLHPDYVIIGE-----PTGK----------GGVG------------------------------------ 107 (189)
T ss_dssp HHHHHHCEEEEEEESEEEECE-----CETT----------SEEE------------------------------------
T ss_pred hhhhhhccccccccccccccc-----cccc----------cccc------------------------------------
Confidence 9999975211 244444321 1111 1100
Q ss_pred ccccCCCCCceEEEEEEEcCCcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCccc
Q 013442 258 SREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTV 337 (443)
Q Consensus 258 ~~~~~~~~~~t~~v~~i~gG~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 337 (443)
..
T Consensus 108 ------------------------------------------------------------------------------~~ 109 (189)
T PF01546_consen 108 ------------------------------------------------------------------------------SD 109 (189)
T ss_dssp ------------------------------------------------------------------------------HC
T ss_pred ------------------------------------------------------------------------------cc
Confidence 34
Q ss_pred CCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHh--hcCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHH
Q 013442 338 NNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAE--AIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAA 415 (443)
Q Consensus 338 ~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~~~~--~ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~ 415 (443)
.++++++.+.+++++..+.+. .....++++|++++.. ..+..+.++| ||. ..+|++||+++++++.++++
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~tD~~~~~~~~~~~~~~i~~G-----~~~-~~~H~~~E~i~~~~l~~~~~ 181 (189)
T PF01546_consen 110 NDPPLVQALQAAAQEVGGEPP--EPVASGGGTDAGFLAEVKGLGIPAIGFG-----PGG-SNAHTPDEYIDIEDLVKGAK 181 (189)
T ss_dssp TCHHHHHHHHHHHHHTTSSEE--EEEEESSSSTHHHHHCHHHTTEEEEEEE-----SCE-ESTTSTT-EEEHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHhhccc--cccceeccccchhhhhhhccccceeeeC-----CCC-CCCCCCCcEecHHHHHHHHH
Confidence 677799999999999855233 2356889999999995 3222334566 444 57999999999999999999
Q ss_pred HHHHHHH
Q 013442 416 LHASLAT 422 (443)
Q Consensus 416 ~~a~~~~ 422 (443)
+|++++.
T Consensus 182 ~~~~~l~ 188 (189)
T PF01546_consen 182 IYAALLE 188 (189)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9999875
No 66
>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism]
Probab=99.75 E-value=5.1e-17 Score=155.19 Aligned_cols=261 Identities=13% Similarity=0.127 Sum_probs=173.8
Q ss_pred HHHHHHHHHHHhCCCCCc--ccHHHHHHHHHHHHhCCCCeee----------cc--cCceEEEEECCC-CCcEEEEEEec
Q 013442 50 YWMVNIRRKIHENPELGF--QEFETSKLIRAELDQMGIPYKF----------PV--AVTGVVGYIGTG-QPPFVALRADM 114 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~--~E~~~~~~l~~~l~~~G~~~~~----------~~--~~~~via~~~~~-~~~~I~~~~H~ 114 (443)
+++.++.-+|++.||+++ .|...+++|...|+++-+=-+. .+ ++.|++|-++++ +..+|++.||+
T Consensus 8 e~v~~lt~~LV~~~SvtgT~GE~a~ad~l~~vL~~~pYFqehped~~~~pi~nDpygR~nv~AlVrg~~~k~tvvl~gH~ 87 (553)
T COG4187 8 ERVRALTLSLVSWPSVTGTPGEGAFADRLLGVLGELPYFQEHPEDLWLQPIHNDPYGRRNVFALVRGGTSKRTVVLHGHF 87 (553)
T ss_pred HHHHHHHHHHeeccccCCCcccccHHHHHHHHHhcCchhhhChHhhcccCCCCCccccceeEEEEecCCCCceEEEeecc
Confidence 789999999999999976 5678899999988877531111 12 578999999774 45899999999
Q ss_pred ccccCcccCCCc---cc----------------------cCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEE
Q 013442 115 DALAMEESVEWE---HK----------------------SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIV 166 (443)
Q Consensus 115 DtVp~~~~~~w~---~~----------------------~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~ 166 (443)
|||.+.+-...+ |+ -..+++|+|||+ |+|+|+.|++++-+.+. ...+|+|.
T Consensus 88 DtV~iedYg~lKd~Afdp~~ll~~~i~~~e~~~erv~~Dl~SGDwlfGRGa~DMKsGlav~la~L~~fa~~-~~~~GNlL 166 (553)
T COG4187 88 DTVSIEDYGELKDLAFDPLALLDALIESLELREERVLRDLESGDWLFGRGALDMKSGLAVHLACLEEFAAR-TDRQGNLL 166 (553)
T ss_pred ceeecccccchhhhccCHHHHHHHHHHhhccCHHHHhhhhhccCcccCCCchhhhhhhHHHHHHHHHHhhC-CCCCCcEE
Confidence 999876643322 21 134789999997 89999999999999887 48999999
Q ss_pred EEEeccCC-ccchHHHHHHc--CCCC--ccceeeEecCCCCCCC--ceEEeecCcccccceEEEEEEEecCCCCCCCCCC
Q 013442 167 LVFQPAEE-GGGGAKKMLDA--GALE--NVEAIFGLHVSSLFPV--GTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHT 239 (443)
Q Consensus 167 ~i~~~dEE-g~~G~~~~~~~--g~~~--~~d~~i~~~~~~~~~~--g~~~~~~g~~~~g~~~~~v~v~G~~aHss~p~~g 239 (443)
|+.++||| .+.|++..+.. +..+ +++...+++.+...|. |.-+.....+..|..-.-..|.|+..|.|+|..|
T Consensus 167 f~a~pdEE~~s~G~r~a~~~L~~L~kk~~l~~~~~IN~D~~~~~~dGd~~ryvYtGtiGKLLp~f~vvG~etHvG~~f~G 246 (553)
T COG4187 167 FMAVPDEEVESRGMREARPALPGLKKKFDLEYTAAINLDVTSDQGDGDQGRYVYTGTIGKLLPFFFVVGCETHVGYPFEG 246 (553)
T ss_pred EEeccchhhhcccHHHHHHHHHHHHHhhCceEEEEeccccccCCCCCccceEEEeccchhhcceeEEEeeccccCCcccC
Confidence 99999999 66788766532 1111 3444444443332222 1111111123346666777899999999999999
Q ss_pred CcHHHHHHHHHHHHHHh---hccccCCCCCceEEEEEEEc---CCcCcc-ccCcEEEEEEEecCChHHHHHHHHHHHHHH
Q 013442 240 IDPIVAASNVIVSLQHL---VSREADPLDSQVLTVAKFEG---GGAFNI-IPDSVTIGGTFRAFSKESIIQLKQRIEEVV 312 (443)
Q Consensus 240 ~NAi~~~~~~i~~l~~~---~~~~~~~~~~~t~~v~~i~g---G~~~n~-vP~~a~~~~diR~~~~~~~~~v~~~i~~~~ 312 (443)
+||...++.++.+|+-- ..+...... ..++.+.- -.+.|| .|..+.+.|++=+. ..+.+++.+++++..
T Consensus 247 vnan~maSei~~~le~N~~l~dr~~Ge~t---~PPs~L~qkDlKe~Y~VqTp~~a~~~fN~l~h-~~ta~~~~d~l~~~a 322 (553)
T COG4187 247 VNANFMASEITRRLELNADLADRVDGEIT---PPPSCLEQKDLKESYNVQTPERAWLYFNWLYH-SRTAKELFDRLKEEA 322 (553)
T ss_pred CCHHHHHHHHHHHhhcChhhhhhhCCeeC---CCcHhhhhhhhhhhccccCcchhhhhheehhh-cCCHHHHHHHHHHHH
Confidence 99999999999988632 111111111 11111111 123343 38888888888665 445555555555554
Q ss_pred HHH
Q 013442 313 MKQ 315 (443)
Q Consensus 313 ~~~ 315 (443)
+++
T Consensus 323 ~~A 325 (553)
T COG4187 323 ETA 325 (553)
T ss_pred HHH
Confidence 443
No 67
>PF07687 M20_dimer: Peptidase dimerisation domain This family only corresponds to M20 family; InterPro: IPR011650 This domain consists of 4 beta strands and two alpha helices which make up the dimerisation surface of members of the MEROPS peptidase family M20 []. This family includes a range of zinc exopeptidases: carboxypeptidases, dipeptidases and specialised aminopeptidases [].; GO: 0016787 hydrolase activity; PDB: 3GB0_A 2F7V_A 1R3N_C 2VL1_D 2V8V_C 1R43_B 2V8G_B 2V8H_D 2V8D_A 3PFE_A ....
Probab=99.74 E-value=2.1e-17 Score=135.55 Aligned_cols=103 Identities=30% Similarity=0.378 Sum_probs=94.4
Q ss_pred ccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHHhhcccc-----CCCCCceEEEEEEEcCCcCccccCcEEE
Q 013442 215 TLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREA-----DPLDSQVLTVAKFEGGGAFNIIPDSVTI 289 (443)
Q Consensus 215 ~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~~~~~~~-----~~~~~~t~~v~~i~gG~~~n~vP~~a~~ 289 (443)
+++|..+++|+++|+++|+|.|+.|+||+..+++++.+|+++..+.. ......+++++.++||...|+||++|++
T Consensus 2 g~~G~~~~~i~~~G~~~H~s~~~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~~~n~ip~~a~~ 81 (111)
T PF07687_consen 2 GHRGVIWFRITITGKSGHSSRPEKGVNAIEAAARFLNALEELEFEWAFRPEEFFPGPPTLNIGSIEGGTAPNVIPDEATL 81 (111)
T ss_dssp EEEEEEEEEEEEESBSEETTSGGGSBCHHHHHHHHHHHHHHTTCHBTSTHHHCTCTSEEEEEEEEEEESSTTEESSEEEE
T ss_pred cCCCEEEEEEEEEeeccCCCCccCccCHHHHHHHHHHHHHHhhcccccccccccccccceeEeecccCCcCCEECCEEEE
Confidence 35699999999999999999999999999999999999998864432 4567889999999999999999999999
Q ss_pred EEEEecCChHHHHHHHHHHHHHHHHHHH
Q 013442 290 GGTFRAFSKESIIQLKQRIEEVVMKQAS 317 (443)
Q Consensus 290 ~~diR~~~~~~~~~v~~~i~~~~~~~~~ 317 (443)
++++|++|.++.++++++|++.+++.+.
T Consensus 82 ~~~~R~~p~~~~~~i~~~i~~~~~~~~~ 109 (111)
T PF07687_consen 82 TVDIRYPPGEDLEEIKAEIEAAVEKIAK 109 (111)
T ss_dssp EEEEEESTCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCcchHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999999998765
No 68
>PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional
Probab=99.68 E-value=2.6e-15 Score=144.35 Aligned_cols=132 Identities=19% Similarity=0.194 Sum_probs=104.5
Q ss_pred HHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeec-----------c--------cCceEEEEECCCCCcEEEE
Q 013442 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFP-----------V--------AVTGVVGYIGTGQPPFVAL 110 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~-----------~--------~~~~via~~~~~~~~~I~~ 110 (443)
+.+..+...+-..+..|+.|.++++||.++|+++|++++.. . ...|++|++++...+.|+|
T Consensus 35 ~~~~~ia~~~~gR~~gS~~E~~aA~yL~~~f~~lG~~v~~q~f~~~~~~~~~~g~~~~~~~~g~nVIa~~~G~~~~~Ill 114 (346)
T PRK10199 35 TQARHIATFFPGRMTGSPAEMLSADYLRQQFQQMGYQSDIRTFNSRYIYTARDNRKNWHNVTGSTVIAAHEGKAPQQIII 114 (346)
T ss_pred HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHCCCceEeeeccccceeecccccccccCCccceEEEEECCCCCCeEEE
Confidence 44555555666778888999999999999999999987631 1 1357999997765589999
Q ss_pred EEecccccCcccCCCccccCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchHHHHHHcC
Q 013442 111 RADMDALAMEESVEWEHKSKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAG 186 (443)
Q Consensus 111 ~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~~~~~g 186 (443)
.||+|||++.....|.+.. +.++++|+ |++++++|+++++|++. .++.+|.|+++++|| |..|+++++++.
T Consensus 115 ~AH~DTV~p~~~~~~~~~~---~g~~~~GA~DnasGvA~lLe~ar~l~~~--~~~~~I~fv~~~~EE~Gl~GS~~~~~~~ 189 (346)
T PRK10199 115 MAHLDTYAPQSDADVDANL---GGLTLQGMDDNAAGLGVMLELAERLKNV--PTEYGIRFVATSGEEEGKLGAENLLKRM 189 (346)
T ss_pred EEEcCcCCCCCCCccccCC---CCcccCCccccHHHHHHHHHHHHHHhhC--CCCCcEEEEEECCcccCcHHHHHHHHhc
Confidence 9999999754434454432 22788998 69999999999999865 477899999999999 779999999863
No 69
>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family. This model describes a subfamily of MEROPS peptidase family M42, a glutamyl aminopeptidase family that also includes the cellulase CelM from Clostridium thermocellum and deblocking aminopeptidases that can remove acylated amino acids. Members of this family occur in a three gene cassette with an amidotransferase (TIGR03104)in the asparagine synthase (glutamine-hydrolyzing) family, and a probable acetyltransferase (TIGR03103) in the GNAT family.
Probab=99.67 E-value=1.3e-14 Score=141.53 Aligned_cols=128 Identities=18% Similarity=0.229 Sum_probs=104.2
Q ss_pred HHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeecccCceEEEEECCC-CCcEEEEEEecccccC-----cc--
Q 013442 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG-QPPFVALRADMDALAM-----EE-- 121 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~-~~~~I~~~~H~DtVp~-----~~-- 121 (443)
+.+++++++|+++||+|+.|.++++++.++|+++|++++.+ ...|+++.+.+. .+|+|+|.||||+|.. .+
T Consensus 3 ~~~~~lLk~Lv~~~s~SG~E~~V~~~l~~~l~~~g~ev~~D-~~Gnlia~~~g~~~~~~v~l~aHmDevG~~V~~I~~~G 81 (343)
T TIGR03106 3 DYLTETLLALLAIPSPTGFTDAVVRYVAERLEDLGIEYELT-RRGAIRATLPGREATPARAVVTHLDTLGAMVRELKDNG 81 (343)
T ss_pred HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCeEEEC-CCeEEEEEECCCCCCCeEEEEEeeccccceeeEECCCC
Confidence 56889999999999999999999999999999999998864 567999988653 4589999999999954 11
Q ss_pred ------cCCCc------------------------------------------cc-------------------------
Q 013442 122 ------SVEWE------------------------------------------HK------------------------- 128 (443)
Q Consensus 122 ------~~~w~------------------------------------------~~------------------------- 128 (443)
..+|+ ++
T Consensus 82 ~l~~~~iGG~~~~~l~g~~v~i~t~~g~~~Gvi~~~~~~~H~~~~~~~~~~~~~~~~~l~iDiG~~s~ee~~~lGV~~Gd 161 (343)
T TIGR03106 82 RLELVPIGHWSARFAEGARVTIFTDSGEFRGTILPLKASGHAFNEEIDSQPTGWDHVEVRVDARASCRADLVRLGISVGD 161 (343)
T ss_pred eEEEEecCCCcccceeCCEEEEEeCCCeEEEEECCCCCCCccCChHHccCCCCCcccEEEEECCcCCHHHHHHcCCCCCC
Confidence 00111 00
Q ss_pred ---------cCCCCeeecCcc--hHHHHHHHHHHHHHHcccccCCceEEEEEeccCCccch
Q 013442 129 ---------SKVPGKMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGGG 178 (443)
Q Consensus 129 ---------~~~~g~l~GrG~--kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEEg~~G 178 (443)
...+|++|||+. |+++++++++++.|++.+..++.+|.++|+++||.+.|
T Consensus 162 ~v~~~~~~~~~~~~~i~gr~~D~K~G~a~~l~~~~~l~~~~~~~~~~v~~~~t~qEEvG~g 222 (343)
T TIGR03106 162 FVAFDPQPEFLANGFIVSRHLDDKAGVAALLAALKAIVEHKVPLPVDVHPLFTITEEVGSG 222 (343)
T ss_pred EEEECCccEEecCCEEEEEecccHHhHHHHHHHHHHHHhcCCCCCceEEEEEECCcccCcc
Confidence 013578999996 79999999999999987777899999999999993355
No 70
>PRK09961 exoaminopeptidase; Provisional
Probab=99.66 E-value=1.9e-14 Score=140.85 Aligned_cols=248 Identities=15% Similarity=0.137 Sum_probs=169.2
Q ss_pred HHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeecccCceEEEEECCCCCcEEEEEEecccccC-----cc-------
Q 013442 54 NIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAM-----EE------- 121 (443)
Q Consensus 54 ~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~~~~~I~~~~H~DtVp~-----~~------- 121 (443)
++|++|+++||+|++|.++++++.++|+++|++++.+ ...|+++++.++++|+|+|.||||+|+. .+
T Consensus 4 ~~L~~L~~~~s~sG~E~~v~~~i~~~l~~~~~~v~~D-~~Gnvi~~~~g~~~~~v~l~aHmDevg~~V~~I~~~G~l~~~ 82 (344)
T PRK09961 4 SLLKALSEADAIASSEQEVRQILLEEADRLQKEVRFD-GLGSVLIRLNESTGPKVMICAHMDEVGFMVRSISREGAIDVL 82 (344)
T ss_pred HHHHHHHhCCCCCCChHHHHHHHHHHHHhhCCEEEEC-CCCCEEEEEcCCCCCEEEEEeccceeceEEEEECCCceEEEE
Confidence 6799999999999999999999999999999998864 5679999886544589999999999954 11
Q ss_pred -cCCCcc-------------------------------c---------c-----------------------CCCCeeec
Q 013442 122 -SVEWEH-------------------------------K---------S-----------------------KVPGKMHA 137 (443)
Q Consensus 122 -~~~w~~-------------------------------~---------~-----------------------~~~g~l~G 137 (443)
..+|.. . + ..++++.|
T Consensus 83 ~vGG~~~~~~~~~~v~i~~~~g~~i~Gvi~~~~~~~~~~~l~iDiG~~s~ee~~~~GI~~Gd~v~~~~~~~~~~~~~i~g 162 (344)
T PRK09961 83 PVGNVRMAARQLQPVRITTREECKIPGLLNGDRQGNDVSAMRVDIGARSYDEVMQAGIRPGDRVTFDTTFQVLPHQRVMG 162 (344)
T ss_pred eCCCccccccCCCEEEEEeCCCCEeeEEEChhhcCCCHHHEEEEcCCCCHHHHHhcCCCCCCEEEEcceeEEecCCEEEE
Confidence 012210 0 0 02345556
Q ss_pred Ccc--hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchHHHHHHcCCCCccceeeEecCCCCCCCceEEeecCc
Q 013442 138 CGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGP 214 (443)
Q Consensus 138 rG~--kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~~~~~g~~~~~d~~i~~~~~~~~~~g~~~~~~g~ 214 (443)
+.- +.++++++.+++.+++. +++.++.++|+..|| |..|++..... + ++|.+|+.+...
T Consensus 163 kalDnR~g~~~lle~l~~l~~~--~~~~~v~~~~tvqEEvG~rGa~~aa~~--i-~pd~~I~vDv~~------------- 224 (344)
T PRK09961 163 KAFDDRLGCYLLVTLLRELHDA--ELPAEVWLVASSSEEVGLRGGQTATRA--V-SPDVAIVLDTAC------------- 224 (344)
T ss_pred eechhhHhHHHHHHHHHHhhhc--CCCceEEEEEEcccccchHHHHHHHhc--c-CCCEEEEEeccC-------------
Confidence 665 47999999999999764 478999999999999 77899877432 2 356665432110
Q ss_pred ccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEcCCcCccccCcEEEEEEEe
Q 013442 215 TLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFR 294 (443)
Q Consensus 215 ~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gG~~~n~vP~~a~~~~diR 294 (443)
|.-.|....+ +...+..
T Consensus 225 -----------------~~d~~~~~~~----------------------------~~~~lg~------------------ 241 (344)
T PRK09961 225 -----------------WAKNFDYGAA----------------------------NHRQIGN------------------ 241 (344)
T ss_pred -----------------CCCCCCCCCC----------------------------cccccCC------------------
Confidence 0001110000 0000111
Q ss_pred cCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcccCCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHH
Q 013442 295 AFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFF 374 (443)
Q Consensus 295 ~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~~ 374 (443)
|.-++ . ... ....|+.+.+.+++++++. +.+... ....+++||++.+
T Consensus 242 -------------------------Gp~i~--~--~D~--~~i~~~~l~~~l~~~A~~~-~Ip~Q~-~~~~ggGTDa~~~ 288 (344)
T PRK09961 242 -------------------------GPMLV--L--SDK--SLIAPPKLTAWIETVAAEI-GIPLQA-DMFSNGGTDGGAV 288 (344)
T ss_pred -------------------------CceEE--E--ccC--CcCCCHHHHHHHHHHHHHc-CCCcEE-EecCCCcchHHHH
Confidence 11121 1 111 1246788899999988887 765432 1234567999977
Q ss_pred Hh--h-cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 013442 375 AE--A-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRY 424 (443)
Q Consensus 375 ~~--~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l 424 (443)
.. . +|++.+++|.. ..|+|+|+++++++..+++++..++..+
T Consensus 289 ~~~~~Giptv~ig~p~r--------y~Hs~~E~v~~~D~~~~~~Ll~~~i~~l 333 (344)
T PRK09961 289 HLTGTGVPTVVMGPATR--------HGHCAASIADCRDILQMIQLLSALIQRL 333 (344)
T ss_pred HHhCCCCCEEEechhhh--------cccChhheEEHHHHHHHHHHHHHHHHHc
Confidence 55 4 89887766533 4999999999999999999999988543
No 71
>TIGR03107 glu_aminopep glutamyl aminopeptidase. This model represents the M42.001 clade within MEROPS family M42. M42 includes glutamyl aminopeptidase as in the present model, deblocking aminopeptidases as from Pyrococcus horikoshii and related species, and endo-1,4-beta-glucanase (cellulase M) as from Clostridium thermocellum. The current family includes
Probab=99.59 E-value=2.1e-13 Score=133.06 Aligned_cols=243 Identities=16% Similarity=0.157 Sum_probs=169.3
Q ss_pred HHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeecccCceEEEEECCC--CCcEEEEEEecccccC-----cc-----
Q 013442 54 NIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG--QPPFVALRADMDALAM-----EE----- 121 (443)
Q Consensus 54 ~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~--~~~~I~~~~H~DtVp~-----~~----- 121 (443)
++|++|+++|++|+.|.++++++.++|++++.+++.+ ...|+++.++++ .+|+|+|.+|||+|+. .+
T Consensus 2 ~~L~~L~~~~gpSG~E~~v~~~i~~~l~~~~~~v~~D-~~GNvia~~~g~~~~~~~vml~AHmDeVGf~V~~I~~~G~l~ 80 (350)
T TIGR03107 2 NKIKEVTELQGTSGFEHPIRDYLRQDITPLVDQVETD-GLGGIFGIKESQVENAPRVMVAAHMDEVGFMVSQIKPDGTFR 80 (350)
T ss_pred hHHHHHHhCCCCCCCcHHHHHHHHHHHHhhCCEEEEC-CCCCEEEEecCCCCCCCEEEEEecccEeCEEEEEECCCceEE
Confidence 5699999999999999999999999999999988765 456899988653 3589999999999943 11
Q ss_pred ---cCCCcc-----------------------------------c----------------c------------------
Q 013442 122 ---SVEWEH-----------------------------------K----------------S------------------ 129 (443)
Q Consensus 122 ---~~~w~~-----------------------------------~----------------~------------------ 129 (443)
..+|.. + +
T Consensus 81 ~~~vGG~~~~~l~gq~V~i~t~~g~~i~GViG~~~~Hl~~~~~~~~~~~~~~~l~IDiGa~skee~~~~GI~vGd~v~~~ 160 (350)
T TIGR03107 81 VVELGGWNPLVVSSQRFTLFTRKGKKYPVISGSVPPHLLRGSSGGPQLPAVSDILFDGGFTNKDEAWSFGVRPGDVIVPQ 160 (350)
T ss_pred EEeCCCccccccCCcEEEEEeCCCCEEEEEEeCCcccccChhhcccccCChhhEEEEeCCCCHHHHHhcCCCCCCEEEEC
Confidence 112210 0 0
Q ss_pred -----C-CCCeeecCcc--hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchHHHHHHcCCCCccceeeEecCC
Q 013442 130 -----K-VPGKMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVS 200 (443)
Q Consensus 130 -----~-~~g~l~GrG~--kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~~~~~g~~~~~d~~i~~~~~ 200 (443)
. .++++.|+.- +.++++++.+++.|++. +++.++.++|++.|| |..|++..... + ++|.+|+.+..
T Consensus 161 ~~~~~~~~~~~i~~kalDdR~g~a~l~e~l~~l~~~--~~~~~l~~~~tvqEEvG~rGA~~aa~~--i-~pD~aI~vDv~ 235 (350)
T TIGR03107 161 TETILTANGKNVISKAWDNRYGVLMILELLESLKDQ--ELPNTLIAGANVQEEVGLRGAHVSTTK--F-NPDIFFAVDCS 235 (350)
T ss_pred CCeEEEcCCCEEEEeccccHHHHHHHHHHHHHhhhc--CCCceEEEEEEChhhcCchhhhhHHhh--C-CCCEEEEEecC
Confidence 0 1234555554 47999999999999865 578999999999999 77999876432 1 45766654321
Q ss_pred CCCCCceEEeecCcccccceEEEEEEEecCCCCC-CCCCCCcHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEcCCc
Q 013442 201 SLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAA-IPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGA 279 (443)
Q Consensus 201 ~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss-~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gG~~ 279 (443)
+ ++ .|... + ..+..
T Consensus 236 ~-------------------------------~~d~~~~~-~------------------------------~~lg~--- 250 (350)
T TIGR03107 236 P-------------------------------AGDIYGDQ-G------------------------------GKLGE--- 250 (350)
T ss_pred C-------------------------------cCCCCCCC-c------------------------------cccCC---
Confidence 1 00 11000 0 00000
Q ss_pred CccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcccCCHHHHHHHHHHHHHhcCCccc
Q 013442 280 FNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNI 359 (443)
Q Consensus 280 ~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~ 359 (443)
|.-+. . ... ....++.+.+.+.+++++. +.+..
T Consensus 251 ----------------------------------------Gp~i~--~--~D~--~~i~~~~l~~~l~~~A~~~-~I~~Q 283 (350)
T TIGR03107 251 ----------------------------------------GTLLR--F--FDP--GHIMLPRMKDFLLTTAEEA-GIKYQ 283 (350)
T ss_pred ----------------------------------------CceEE--E--ecC--CCCCCHHHHHHHHHHHHHc-CCCcE
Confidence 11111 1 111 1245677888888888887 77653
Q ss_pred ccCCCCCCCchHH--HHHhh-cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 013442 360 KENRPLMGTEDFS--FFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRY 424 (443)
Q Consensus 360 ~~~~~~~g~tDa~--~~~~~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l 424 (443)
. ...+|+||++ ++... +|++..++|.+. .|+|.|.++++++.++++++..++.++
T Consensus 284 ~--~~~~gGtDa~~~~~~~~Gvpt~~i~ip~Ry--------~Hs~~e~i~~~D~~~~~~Ll~~~i~~l 341 (350)
T TIGR03107 284 Y--YVAKGGTDAGAAHLKNSGVPSTTIGVCARY--------IHSHQTLYSIDDFLAAQAFLQAIVKKL 341 (350)
T ss_pred E--ecCCCCchHHHHHHhCCCCcEEEEccCccc--------ccChhheeeHHHHHHHHHHHHHHHHhc
Confidence 2 3456789999 55555 999988888764 999999999999999999999988764
No 72
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism]
Probab=99.56 E-value=7.6e-13 Score=127.68 Aligned_cols=253 Identities=19% Similarity=0.180 Sum_probs=171.3
Q ss_pred HHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeecccCceEEEEECCCCC-cEEEEEEecccccC-----cc--
Q 013442 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQP-PFVALRADMDALAM-----EE-- 121 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~~~-~~I~~~~H~DtVp~-----~~-- 121 (443)
++++++|++|.++|++|+.|.++.+|+.++|++++.+++.+ ...|+++++++..+ |.|++.+|||.|-. .+
T Consensus 2 ~~~~~~LkeL~~~~gpsG~E~eVr~~~~~el~~~~~ev~~D-~lGnlia~~~g~~g~~~imi~AHmDEiG~mV~~I~~~G 80 (355)
T COG1363 2 EELLELLKELLEAPGPSGYEEEVRDVLKEELEPLGDEVEVD-RLGNLIAKKGGKNGPPKVMIAAHMDEIGFMVKEIEDDG 80 (355)
T ss_pred hHHHHHHHHHHcCCCCCCcHHHHHHHHHHHHHHhCCceEEc-CCCcEEEEecCCCCCccEEEEeecceeeeeEEEECCCc
Confidence 56889999999999999999999999999999999998865 45699999987444 66999999999932 11
Q ss_pred ------cCCCccc-------------------------------c-----------------------------------
Q 013442 122 ------SVEWEHK-------------------------------S----------------------------------- 129 (443)
Q Consensus 122 ------~~~w~~~-------------------------------~----------------------------------- 129 (443)
-.+|... .
T Consensus 81 ~Lr~~~IGG~~~~~~~gq~v~i~t~~g~~i~GvIg~~p~H~~~~~~~~~~~~~~~el~iDiga~skeea~~lGI~vGd~v 160 (355)
T COG1363 81 FLRFVPIGGWDPQVLEGQRVTIHTDKGKKIRGVIGSKPPHLLKEEAERKKPPEWDELFIDIGASSKEEAEELGIRVGDFV 160 (355)
T ss_pred eEEEEEcCCcChhhccCcEEEEEeCCCcEEeeeEcccCccccCccccccCCCchhhEEEECCcCCHHHHHhcCCCCCCEE
Confidence 1234210 0
Q ss_pred --------CCCCeeecCcc--hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchHHHHHHcCCCCccceeeEec
Q 013442 130 --------KVPGKMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLH 198 (443)
Q Consensus 130 --------~~~g~l~GrG~--kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~~~~~g~~~~~d~~i~~~ 198 (443)
..++++-+|.- +.++++++.+++.| + +.+++.++.|+|++.|| |..|++....+ -++|++|..+
T Consensus 161 ~~~~~~~~l~~~~i~skalDdR~gva~lle~lk~l-~-~~~~~~~vy~v~tvqEEVGlrGA~~~a~~---i~pd~aiavd 235 (355)
T COG1363 161 VFDPRFRELANGRVVSKALDDRAGVAALLELLKEL-K-GIELPADVYFVASVQEEVGLRGAKTSAFR---IKPDIAIAVD 235 (355)
T ss_pred EEcCceEEecCCcEEeeeccchHhHHHHHHHHHHh-c-cCCCCceEEEEEecchhhccchhhccccc---cCCCEEEEEe
Confidence 00123333333 58999999999999 4 67899999999999999 77888776331 1456666433
Q ss_pred CCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEcCC
Q 013442 199 VSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGG 278 (443)
Q Consensus 199 ~~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gG~ 278 (443)
..+ .+. .|..... .+.+.
T Consensus 236 ~~~---~~d---------------------------~~~~~~~-----------------------------~~~lg--- 253 (355)
T COG1363 236 VTP---AGD---------------------------TPGVPKG-----------------------------DVKLG--- 253 (355)
T ss_pred ccc---ccC---------------------------CCCCccc-----------------------------ccccC---
Confidence 211 000 0000000 00000
Q ss_pred cCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcccCCHHHHHHHHHHHHHhcCCcc
Q 013442 279 AFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQN 358 (443)
Q Consensus 279 ~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~ 358 (443)
.|.-+.+.. ..+ ..++.+.+.+.+++++. +.+.
T Consensus 254 ----------------------------------------~Gp~i~~~D--~~~----~~~~~l~~~L~~~A~~~-~Ip~ 286 (355)
T COG1363 254 ----------------------------------------KGPVIRVKD--ASG----IYHPKLRKFLLELAEKN-NIPY 286 (355)
T ss_pred ----------------------------------------CCCEEEEEc--CCC----CCCHHHHHHHHHHHHHc-CCCe
Confidence 111122211 111 12666777777777776 7765
Q ss_pred cccCCCCCCCchHHHHHhh---cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 013442 359 IKENRPLMGTEDFSFFAEA---IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLL 426 (443)
Q Consensus 359 ~~~~~~~~g~tDa~~~~~~---ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~~ 426 (443)
... ...+|+||++.+... +|+...+++... .|+|.|.++++++..+.+++..++..+-.
T Consensus 287 Q~~-v~~~ggTDA~a~~~~g~gvpta~Igip~ry--------~Hs~~e~~~~~D~~~~~~Ll~~~i~~~~~ 348 (355)
T COG1363 287 QVD-VSPGGGTDAGAAHLTGGGVPTALIGIPTRY--------IHSPVEVAHLDDLEATVKLLVAYLESLDR 348 (355)
T ss_pred EEE-ecCCCCccHHHHHHcCCCCceEEEeccccc--------ccCcceeecHHHHHHHHHHHHHHHHhcch
Confidence 422 334478999887665 999888877654 99999999999999999999998887653
No 73
>PRK09864 putative peptidase; Provisional
Probab=99.55 E-value=1.3e-12 Score=127.41 Aligned_cols=247 Identities=16% Similarity=0.103 Sum_probs=168.5
Q ss_pred HHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeecccCceEEEEECCCCCcEEEEEEecccccC-----cc------
Q 013442 53 VNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAM-----EE------ 121 (443)
Q Consensus 53 i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~~~~~I~~~~H~DtVp~-----~~------ 121 (443)
+++|++|+++|++|+.|.++++++.++|+.++.+++.+ ...|+++.. +..+++|+|.+|+|+|+. .+
T Consensus 3 ~~~L~~L~~~~g~SG~E~~v~~~l~~~l~~~~dev~~D-~~GNli~~~-g~~~~kvml~AHmDevG~mV~~I~~~G~l~~ 80 (356)
T PRK09864 3 IELLQQLCEASAVSGDEQEVRDILINTLEPCVNEITFD-GLGSFVARK-GNKGPKVAVVGHMDEVGFMVTHIDESGFLRF 80 (356)
T ss_pred HHHHHHHHcCCCCCCchHHHHHHHHHHHHHhCCEEEEC-CCCCEEEEe-CCCCcEEEEEecccccCEEEEEECCCCeEEE
Confidence 45799999999999999999999999999999998765 456899987 333479999999999943 11
Q ss_pred --cCCCccc--------------------------------------------------c--------------------
Q 013442 122 --SVEWEHK--------------------------------------------------S-------------------- 129 (443)
Q Consensus 122 --~~~w~~~--------------------------------------------------~-------------------- 129 (443)
..+|... +
T Consensus 81 ~~lGG~~~~~l~~q~V~i~t~~g~~v~GVig~~~~H~~~~~~~~k~~~~~~l~IDiGa~s~ee~~~~GV~vGD~v~~~~~ 160 (356)
T PRK09864 81 TTIGGWWNQSMLNHRVTIRTHKGVKIPGVIGSVAPHALTEKQKQQPLSFDEMFIDIGANSREEVEKRGVEIGDFISPEAN 160 (356)
T ss_pred EeCCCcCccccCCCEEEEEeCCCCEEEEEEeCCccccCChhHcccCCChhHEEEEeCCCCHHHHHhcCCCCCCEEEECCC
Confidence 1133200 0
Q ss_pred ---CCCCeeecCcc--hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchHHHHHHcCCCCccceeeEecCCCCC
Q 013442 130 ---KVPGKMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLF 203 (443)
Q Consensus 130 ---~~~g~l~GrG~--kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~~~~~g~~~~~d~~i~~~~~~~~ 203 (443)
..++++.|+.- +.++++++.+++.|++ ++.++.++|++.|| |..|++..... + ++|.+|..+..+.
T Consensus 161 ~~~l~~~~i~~kalDnR~g~~~lle~l~~l~~----~~~~vy~v~TvQEEvGlrGA~~aa~~--i-~PDiaIavDvt~~- 232 (356)
T PRK09864 161 FACWGEDKVVGKALDNRIGCAMMAELLQTVNN----PEITLYGVGSVEEEVGLRGAQTSAEH--I-KPDVVIVLDTAVA- 232 (356)
T ss_pred cEEEcCCEEEEEeCccHHHHHHHHHHHHHhhc----CCCeEEEEEEcchhcchHHHHHHHhc--C-CCCEEEEEecccC-
Confidence 01234445554 4799999999999864 77999999999999 77999887442 2 4577765432110
Q ss_pred CCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEcCCcCccc
Q 013442 204 PVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNII 283 (443)
Q Consensus 204 ~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gG~~~n~v 283 (443)
+. .|..... ...+.+..|.
T Consensus 233 --~d---------------------------~p~~~~~---------------------------~~~~~lG~Gp----- 251 (356)
T PRK09864 233 --GD---------------------------VPGIDNI---------------------------KYPLKLGQGP----- 251 (356)
T ss_pred --CC---------------------------CCCCccc---------------------------ccccccCCCC-----
Confidence 00 1100000 0001111111
Q ss_pred cCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcccCCHHHHHHHHHHHHHhcCCcccccCC
Q 013442 284 PDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENR 363 (443)
Q Consensus 284 P~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~ 363 (443)
-+. . ... ....++.+.+.+.+++++. |.+.... .
T Consensus 252 --------------------------------------~i~--~--~D~--~~i~~~~l~~~l~~~A~~~-~Ip~Q~~-~ 285 (356)
T PRK09864 252 --------------------------------------GLM--L--FDK--RYFPNQKLVAALKSCAAHN-DLPLQFS-T 285 (356)
T ss_pred --------------------------------------eEE--E--ccC--CccCCHHHHHHHHHHHHHc-CCCceEE-E
Confidence 111 1 111 1245677888888888887 7765322 3
Q ss_pred CCCCCchHHHHHhh---cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 013442 364 PLMGTEDFSFFAEA---IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRY 424 (443)
Q Consensus 364 ~~~g~tDa~~~~~~---ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l 424 (443)
...|+||++.+... +|++..+++.+. .|+|.|-++++++..+++++..++.++
T Consensus 286 ~~~ggTDa~~i~~~~~Gvpt~~isiP~RY--------~Hs~~e~~~~~D~e~~~~Ll~~~~~~l 341 (356)
T PRK09864 286 MKTGATDGGRYNVMGGGRPVVALCLPTRY--------LHANSGMISKADYDALLTLIRDFLTTL 341 (356)
T ss_pred cCCCCchHHHHHHhCCCCcEEEEeeccCc--------CCCcceEeEHHHHHHHHHHHHHHHHhc
Confidence 34578998887553 999988888765 999999999999999999999988765
No 74
>KOG2194 consensus Aminopeptidases of the M20 family [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=98.39 E-value=3.5e-06 Score=88.83 Aligned_cols=133 Identities=20% Similarity=0.272 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHhC-CCC--Cc-ccHHHHHHHHHHHHhCCCC-------eeec-----------------ccCceEEEEEC
Q 013442 50 YWMVNIRRKIHEN-PEL--GF-QEFETSKLIRAELDQMGIP-------YKFP-----------------VAVTGVVGYIG 101 (443)
Q Consensus 50 ~~~i~ll~~l~~i-pS~--s~-~E~~~~~~l~~~l~~~G~~-------~~~~-----------------~~~~~via~~~ 101 (443)
+++++.+.++.++ |.+ |. +|..+.+|+.+++++..-. .+++ -+-.|++.++.
T Consensus 57 ~rA~~~l~~ls~~G~~~~gS~~ne~~a~~~il~e~~~i~~~~~~~~~~~Evd~q~~sg~~~~~~~~~~Y~~i~NIvVki~ 136 (834)
T KOG2194|consen 57 ARALKDLLSLSAAGPHPVGSDNNEMHASSFILKEVNKIRKGSQSDLYDMEVDLQSASGSFILEGMTLVYQNISNIVVKIS 136 (834)
T ss_pred HHHHHHHHHHHhcCCcccCchhhHHHHHHHHHHHHHHHHhhhhcchhhheeceeeccceeeehhhhheeeeeeeEEEecC
Confidence 5566777777776 444 43 4567888888877765211 1221 12467889886
Q ss_pred CC--CCc-EEEEEEecccccCcccCCCccccCCCCeeecCcch-HHHHHHHHHHHHHHcccccCCceEEEEEeccCC-cc
Q 013442 102 TG--QPP-FVALRADMDALAMEESVEWEHKSKVPGKMHACGHD-AHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG 176 (443)
Q Consensus 102 ~~--~~~-~I~~~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~k-g~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~ 176 (443)
++ ... .|++++|+|+||.+. |-|-+ .+++++|+++|.+.+....+.++|+|+|...|| +.
T Consensus 137 ~k~~~~~~~lLlnaHfDSvpt~~---------------gAtDDg~~va~mLe~lRv~s~~~~~l~~~vVFLfNgaEE~~L 201 (834)
T KOG2194|consen 137 PKNGNDKNALLLNAHFDSVPTGP---------------GATDDGSGVASMLEALRVLSKSDKLLTHSVVFLFNGAEESGL 201 (834)
T ss_pred CCCCCccceeeeeccccccCCCC---------------CCCcchhHHHHHHHHHHHhhcCCCcccccEEEEecCcccchh
Confidence 54 224 899999999999543 33334 388999999999998887889999999999999 66
Q ss_pred chHHHHHHcCCCC-ccceeeEe
Q 013442 177 GGAKKMLDAGALE-NVEAIFGL 197 (443)
Q Consensus 177 ~G~~~~~~~g~~~-~~d~~i~~ 197 (443)
.|+..++.+..+. .+.+++-+
T Consensus 202 ~gsH~FItQH~w~~~~ka~INL 223 (834)
T KOG2194|consen 202 LGSHAFITQHPWSKNIKAVINL 223 (834)
T ss_pred hhcccceecChhhhhhheEEec
Confidence 8999888766654 35555543
No 75
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M42 (glutamyl aminopeptidase family, clan MH). For members of this family and family M28 the predicted metal ligands occur in the same order in the sequence: H, D, E, D/E, H; and the active site residues occur in the motifs HXD and EE. ; PDB: 2WYR_C 2CF4_A 1VHO_A 3ISX_A 3KL9_G 1YLO_F 3CPX_C 1VHE_A 2GRE_F 1XFO_A ....
Probab=98.36 E-value=1.6e-05 Score=76.23 Aligned_cols=61 Identities=25% Similarity=0.254 Sum_probs=46.8
Q ss_pred CCeeecCcc--hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchHHHHHHcCCCCccceeeEe
Q 013442 132 PGKMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGL 197 (443)
Q Consensus 132 ~g~l~GrG~--kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~~~~~g~~~~~d~~i~~ 197 (443)
++++.|+.. ..++++++.+++.|++. .++.++.|+|++.|| |..|++....+ -++|..|+.
T Consensus 125 ~~~i~gkalDdR~g~~~lle~l~~l~~~--~~~~~v~~v~tvqEEvG~rGA~~aa~~---i~PD~ai~v 188 (292)
T PF05343_consen 125 NGRIVGKALDDRAGCAVLLELLRELKEK--ELDVDVYFVFTVQEEVGLRGAKTAAFR---IKPDIAIAV 188 (292)
T ss_dssp TTEEEETTHHHHHHHHHHHHHHHHHTTS--S-SSEEEEEEESSCTTTSHHHHHHHHH---H-CSEEEEE
T ss_pred CCEEEEEeCCchhHHHHHHHHHHHHhhc--CCCceEEEEEEeeeeecCcceeecccc---cCCCEEEEE
Confidence 355778886 47999999999999885 466999999999999 77899887553 145666654
No 76
>PF04389 Peptidase_M28: Peptidase family M28; InterPro: IPR007484 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain is found in metallopeptidases belonging to the MEROPS peptidase family M28 (aminopeptidase Y, clan MH) []. They also contain a transferrin receptor-like dimerisation domain (IPR007365 from INTERPRO) and a protease-associated PA domain (IPR003137 from INTERPRO).; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3BXM_A 2C6P_A 1Z8L_C 3SJF_A 3BHX_A 2C6G_A 3D7F_A 2XEG_A 3BI1_A 2C6C_A ....
Probab=98.00 E-value=1.7e-05 Score=70.49 Aligned_cols=80 Identities=30% Similarity=0.486 Sum_probs=58.6
Q ss_pred EEEEEEecccccCcccCCCccccCCCCeeecCcc-h--HHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchHHHH
Q 013442 107 FVALRADMDALAMEESVEWEHKSKVPGKMHACGH-D--AHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKM 182 (443)
Q Consensus 107 ~I~~~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~-k--g~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~~ 182 (443)
.|++.+|+|+++ +. | ++ -++.|+ | .|++++|..++.|++.+..++++|+|+|..+|| |..|++++
T Consensus 2 ~ivi~aH~Ds~~-~~---~------~~-~~~~GA~DnasGva~lLelAr~l~~~~~~~~~~i~fv~~~~EE~gl~GS~~~ 70 (179)
T PF04389_consen 2 YIVIGAHYDSVG-GD---A------DG-SWSPGANDNASGVAALLELARVLKELKPQPKRTIRFVFFDGEEQGLLGSRAF 70 (179)
T ss_dssp EEEEEEE--BES-CC---C-------T-CSSS-TTTTHHHHHHHHHHHHHHHHSTHSSSEEEEEEEESSGGGTSHHHHHH
T ss_pred EEEEEeecCCCC-Cc---C------CC-cccCCcccchHHHHHHHHHHHHHHHhhcccCccEEEEEecccccCccchHHH
Confidence 689999999998 22 1 12 367777 3 699999999999999777888999999999999 88999999
Q ss_pred HHcC--CCCccceeeEe
Q 013442 183 LDAG--ALENVEAIFGL 197 (443)
Q Consensus 183 ~~~g--~~~~~d~~i~~ 197 (443)
+++. ...++.++|.+
T Consensus 71 ~~~~~~~~~~~~~~inl 87 (179)
T PF04389_consen 71 VEHDHEELDNIAAVINL 87 (179)
T ss_dssp HHHHHCHHHHEEEEEEE
T ss_pred HHhhhcccccceeEEec
Confidence 9731 11234555544
No 77
>KOG3946 consensus Glutaminyl cyclase [Posttranslational modification, protein turnover, chaperones]
Probab=97.23 E-value=0.0093 Score=55.23 Aligned_cols=142 Identities=15% Similarity=0.139 Sum_probs=91.9
Q ss_pred cccchHHHHhhcCchhHHHHHHHHHHHHhCCCC--CcccHHHHHHHHHHHHhCCCCeeec----------ccCceEEEEE
Q 013442 33 TQIPVKFLDFAKKPEIFYWMVNIRRKIHENPEL--GFQEFETSKLIRAELDQMGIPYKFP----------VAVTGVVGYI 100 (443)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~i~ll~~l~~ipS~--s~~E~~~~~~l~~~l~~~G~~~~~~----------~~~~~via~~ 100 (443)
+.+.+..+..+....--.++.+.++-+ -+|.+ |.+-+++.+||.+.|+.+|+.++.+ ..-.|+++++
T Consensus 34 ~~l~~~~lr~i~~~s~~~~~~~~L~p~-lv~Rvpgs~g~~~vr~~i~~~l~~l~w~ve~~~f~~~tp~g~~~f~nii~tl 112 (338)
T KOG3946|consen 34 SELAESRLRAINPDSDWNRLWENLLPI-LVPRVPGSPGSRQVRRFIIQHLRNLGWAVETDAFTDNTPLGTRNFNNLIATL 112 (338)
T ss_pred ccccHHHHHHhcCCCCHHHHHHhhhhh-hccccCCCCccHHHHHHHHHHHHhcCceeeeccccccCcceeeeeeeEEEec
Confidence 435555555554422114466665544 34444 3455899999999999999998873 1124788988
Q ss_pred CCCCCcEEEEEEecccccCcccCCCccccCCCCeeecCcchHHHHHHHHHHHHHHcccc----cCCceEEEEEeccCCc-
Q 013442 101 GTGQPPFVALRADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRH----EIKGTIVLVFQPAEEG- 175 (443)
Q Consensus 101 ~~~~~~~I~~~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~kg~~a~~l~a~~~l~~~~~----~l~~~i~~i~~~dEEg- 175 (443)
.......+++.+|+|+--... | ..+-+-++-..+|+++..+++|.+.-. ...-.+.++|--+||.
T Consensus 113 ~~~A~r~lVlachydsk~~p~---~-------~~vgatdsAvpcamll~laq~l~~~~~~~~~~s~lsL~LvFFDGEEAf 182 (338)
T KOG3946|consen 113 DPNASRYLVLACHYDSKIFPG---G-------MFVGATDSAVPCAMLLNLAQALDKILCSKVSASQLSLQLVFFDGEEAF 182 (338)
T ss_pred CCCcchheeeecccccccCCC---c-------ceEeeccccccHHHHHHHHHHHHHHHhcccCcCceeEEEEEeccHHHH
Confidence 766557899999999873221 1 112233445688999999988864321 3346788899999982
Q ss_pred --------cchHHHHHHc
Q 013442 176 --------GGGAKKMLDA 185 (443)
Q Consensus 176 --------~~G~~~~~~~ 185 (443)
..|++++.++
T Consensus 183 ~eW~p~DSlYGsRhLA~~ 200 (338)
T KOG3946|consen 183 EEWGPEDSLYGSRHLAAK 200 (338)
T ss_pred hhcCCccccchHHHHHHH
Confidence 1688887653
No 78
>KOG2526 consensus Predicted aminopeptidases - M20/M25/M40 family [Amino acid transport and metabolism]
Probab=96.37 E-value=0.038 Score=54.22 Aligned_cols=112 Identities=21% Similarity=0.310 Sum_probs=77.8
Q ss_pred HHHHHHHHhCCCCeeecc---------cCceEEEEECCC--------CCcEEEEEEecccccCcccCCCccccCCCCeee
Q 013442 74 KLIRAELDQMGIPYKFPV---------AVTGVVGYIGTG--------QPPFVALRADMDALAMEESVEWEHKSKVPGKMH 136 (443)
Q Consensus 74 ~~l~~~l~~~G~~~~~~~---------~~~~via~~~~~--------~~~~I~~~~H~DtVp~~~~~~w~~~~~~~g~l~ 136 (443)
+.+.......|+++...+ --+|+.+++..+ .-|+|++.+|+||..+.+ + +
T Consensus 165 ~~ll~Tasangy~iv~sg~sp~a~~s~ki~nI~G~L~~glra~~dg~~lPtIaivA~ydtfgaap-----------~--l 231 (555)
T KOG2526|consen 165 QHLLQTASANGYSIVSSGQSPEAPPSYKILNIVGRLSSGLRAEGDGSALPTIAIVAHYDTFGAAP-----------G--L 231 (555)
T ss_pred HHHHhhhccCcEEEEecCCCcccCCCCccceEEeecccccccccccccCCeEEEEEeccccccCC-----------C--C
Confidence 556666677788765521 236789988621 239999999999986543 2 3
Q ss_pred cCcc--h-HHHHHHHHHHHHHHccc----ccCCceEEEEEeccCC-ccchHHHHHHcC---CCCccceeeEec
Q 013442 137 ACGH--D-AHVAMLLGAAKMLQVFR----HEIKGTIVLVFQPAEE-GGGGAKKMLDAG---ALENVEAIFGLH 198 (443)
Q Consensus 137 GrG~--k-g~~a~~l~a~~~l~~~~----~~l~~~i~~i~~~dEE-g~~G~~~~~~~g---~~~~~d~~i~~~ 198 (443)
-.|+ + +|+.++|..++.+.+.. -..+.++.|+.+.+-- ..-|++++++-. +-+++|+++|++
T Consensus 232 svgADSNGSGvvaLLelarlfSkly~ypsTrakYnLlF~lt~aG~lNyqGTkkWLe~dd~~lq~nVdfaiCLd 304 (555)
T KOG2526|consen 232 SVGADSNGSGVVALLELARLFSKLYDYPSTRAKYNLLFILTAAGKLNYQGTKKWLEFDDADLQKNVDFAICLD 304 (555)
T ss_pred CCCCCCCCccHHHHHHHHHHHHHHhcCcccccceeEEEEEccCccccccchhhhhhcchHHHHhcccEEEEhh
Confidence 3444 3 47889999999987643 2357999999998766 557888887632 223688999875
No 79
>COG2234 Iap Predicted aminopeptidases [General function prediction only]
Probab=95.79 E-value=0.025 Score=57.75 Aligned_cols=50 Identities=30% Similarity=0.248 Sum_probs=42.4
Q ss_pred ecCcc--h-HHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchHHHHHHcCC
Q 013442 136 HACGH--D-AHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGA 187 (443)
Q Consensus 136 ~GrG~--k-g~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~~~~~g~ 187 (443)
.+.|+ + .|++++|.+++.|+... ++.+|.|++...|| |..|+.+++.+-.
T Consensus 222 ~~~GA~DNasGva~llEiAr~l~~~~--p~~~v~f~~~~aEE~Gl~GS~~~~~~~~ 275 (435)
T COG2234 222 TGPGADDNASGVAALLELARVLKGNP--PKRTVRFVAFGAEESGLLGSEAYVKRLS 275 (435)
T ss_pred CCCCcccccHHHHHHHHHHHHHhcCC--CCceEEEEEecchhhcccccHHHHhcCC
Confidence 34555 3 59999999999999865 88999999999999 8899999988654
No 80
>KOG2195 consensus Transferrin receptor and related proteins containing the protease-associated (PA) domain [Posttranslational modification, protein turnover, chaperones; Inorganic ion transport and metabolism; General function prediction only]
Probab=95.34 E-value=0.045 Score=58.34 Aligned_cols=77 Identities=23% Similarity=0.282 Sum_probs=58.1
Q ss_pred ceEEEEECCC--CCcEEEEEEecccccCcccCCCccccCCCCeeecCcchHHHHHHHHHHHHH---HcccccCCceEEEE
Q 013442 94 TGVVGYIGTG--QPPFVALRADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKML---QVFRHEIKGTIVLV 168 (443)
Q Consensus 94 ~~via~~~~~--~~~~I~~~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~kg~~a~~l~a~~~l---~~~~~~l~~~i~~i 168 (443)
.|+++.++|. +..-|++.+|.|..-.|. .++ ..|++.++...+++ ++.+++|.++|+|+
T Consensus 339 ~NIig~I~Gs~epD~~ViigahrDSw~~Ga--------~dp--------~sGta~Ll~i~~~~~~~~k~gwrP~RtI~F~ 402 (702)
T KOG2195|consen 339 QNIIGKIEGSEEPDRYVIIGAHRDSWTFGA--------IDP--------NSGTALLLEIARALSKLKKRGWRPRRTILFA 402 (702)
T ss_pred eeEEEEEecCcCCCeEEEEeccccccccCC--------cCC--------CccHHHHHHHHHHHHHHHHcCCCccceEEEE
Confidence 5899999774 457899999999654221 111 24566676666654 46789999999999
Q ss_pred EeccCC-ccchHHHHHHcC
Q 013442 169 FQPAEE-GGGGAKKMLDAG 186 (443)
Q Consensus 169 ~~~dEE-g~~G~~~~~~~g 186 (443)
.-.+|| |..|+-.++++.
T Consensus 403 sWdAeEfGliGStE~~E~~ 421 (702)
T KOG2195|consen 403 SWDAEEFGLLGSTEWAEEY 421 (702)
T ss_pred EccchhccccccHHHHHHH
Confidence 999999 889999888753
No 81
>PRK00913 multifunctional aminopeptidase A; Provisional
Probab=94.22 E-value=0.65 Score=47.62 Aligned_cols=133 Identities=13% Similarity=0.091 Sum_probs=85.2
Q ss_pred HHHHhhcCchhHHHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeec-------ccCceEEEEECCC-CCcEEE
Q 013442 38 KFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFP-------VAVTGVVGYIGTG-QPPFVA 109 (443)
Q Consensus 38 ~~~~~~~~~~~~~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~-------~~~~~via~~~~~-~~~~I~ 109 (443)
+..+.++..+...+.+.+.|+|++.|+--......++++.+.+++.|+++++. .+...+++.=.++ ..|.++
T Consensus 159 ~~~~~~~~~~~~a~~~~~aRdL~n~P~n~~tP~~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~GS~~~prli 238 (483)
T PRK00913 159 EAEKAIAHGEAIAEGVNLARDLVNEPPNILTPAYLAERAKELAKEYGLEVEVLDEKEMEKLGMGALLAVGQGSANPPRLI 238 (483)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCChhhcCHHHHHHHHHHHHHhcCCEEEEEeHHHHHhCCCCcEEEEeccCCCCCeEE
Confidence 33444444444467889999999999866667788999999999999998872 2233444443443 346666
Q ss_pred EEEecc----cccCcccCCCcccc----CC-CCeeec-CcchHHHHHHHHHHHHHHcccccCCceEEEEEeccCC
Q 013442 110 LRADMD----ALAMEESVEWEHKS----KV-PGKMHA-CGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (443)
Q Consensus 110 ~~~H~D----tVp~~~~~~w~~~~----~~-~g~l~G-rG~kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE 174 (443)
..-+.- .+-+|. +.+|++ .+ ...|++ ++-.+|.|+.+++++++.+. +++.+|+.++...|=
T Consensus 239 ~l~Y~g~~~~i~LVGK--GITFDsGG~slKp~~~M~~MK~DM~GAAaVlga~~aia~l--kl~vnV~~v~~l~EN 309 (483)
T PRK00913 239 VLEYKGGKKPIALVGK--GLTFDSGGISLKPAAGMDEMKYDMGGAAAVLGTMRALAEL--KLPVNVVGVVAACEN 309 (483)
T ss_pred EEEECCCCCeEEEEcC--ceEecCCCccCCCCcChhhcccccHhHHHHHHHHHHHHHc--CCCceEEEEEEeecc
Confidence 555431 112222 444552 11 111221 11148999999999999986 478999998888765
No 82
>PF00883 Peptidase_M17: Cytosol aminopeptidase family, catalytic domain; InterPro: IPR000819 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to the MEROPS peptidase family M17 (leucyl aminopeptidase family, clan MF), the type example being leucyl aminopeptidase from Bos taurus (Bovine). Aminopeptidases are exopeptidases involved in the processing and regular turnover of intracellular proteins, although their precise role in cellular metabolism is unclear [, ]. Leucine aminopeptidases cleave leucine residues from the N-terminal of polypeptide chains, but substantial rates are evident for all amino acids []. The enzymes exist as homo-hexamers, comprising 2 trimers stacked on top of one another []. Each monomer binds 2 zinc ions and folds into 2 alpha/beta-type quasi-spherical globular domains, producing a comma-like shape []. The N-terminal 150 residues form a 5-stranded beta-sheet with 4 parallel and 1 anti-parallel strand sandwiched between 4 alpha-helices []. An alpha-helix extends into the C-terminal domain, which comprises a central 8-stranded saddle-shaped beta-sheet sandwiched between groups of helices, forming the monomer hydrophobic core []. A 3-stranded beta-sheet resides on the surface of the monomer, where it interacts with other members of the hexamer []. The 2 zinc ions and the active site are entirely located in the C-terminal catalytic domain [].; GO: 0004177 aminopeptidase activity, 0006508 proteolysis, 0005622 intracellular; PDB: 3KZW_L 3KQX_C 3KQZ_L 3KR4_I 3KR5_J 3T8W_C 3H8F_D 3H8G_A 3H8E_B 3IJ3_A ....
Probab=94.22 E-value=0.57 Score=45.04 Aligned_cols=110 Identities=18% Similarity=0.152 Sum_probs=72.3
Q ss_pred HHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeec--------------------ccCc-eEEEEECCCC---CcEE
Q 013442 53 VNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFP--------------------VAVT-GVVGYIGTGQ---PPFV 108 (443)
Q Consensus 53 i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~--------------------~~~~-~via~~~~~~---~~~I 108 (443)
+.+.|+|++-|.--......++++.+.+++.|+++++. ...| -++.+|.+.+ .++|
T Consensus 1 vn~aRdL~n~P~n~~~P~~~a~~~~~~~~~~~v~v~v~~~~~l~~~gmg~llaVg~gS~~~P~lv~l~Y~g~~~~~~~~i 80 (311)
T PF00883_consen 1 VNLARDLVNTPPNILTPETFAEYAKELAKKYGVKVEVLDEKELEKLGMGGLLAVGRGSRHPPRLVVLEYKGNGGKSKKPI 80 (311)
T ss_dssp HHHHHHHHHS-TTTSSHHHHHHHHHHHHHHCTEEEEEEEHHHHHHTT-HHHHHHHTTSSS--EEEEEEEETSTSTTSEEE
T ss_pred ChHHHhhhCCChhhcCHHHHHHHHHHHHhhcCCEEEEEeHHHHHHcCCccEeeecccCCCCCEEEEEEECCCCCCCCccE
Confidence 35789999999977777899999999999999988772 0112 2445553322 3566
Q ss_pred EEEEecccccCcccCCCcccc-----CCCCeeec-CcchHHHHHHHHHHHHHHcccccCCceEEEEEeccCC
Q 013442 109 ALRADMDALAMEESVEWEHKS-----KVPGKMHA-CGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (443)
Q Consensus 109 ~~~~H~DtVp~~~~~~w~~~~-----~~~g~l~G-rG~kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE 174 (443)
+|.|- +.+|++ +..+.|.+ ++-++|.|+.+++++++.+. +++.+|..++...|=
T Consensus 81 ~LVGK----------GiTFDtGG~~lKp~~~M~~Mk~DM~GAAaV~ga~~aia~l--k~~vnV~~~l~~~EN 140 (311)
T PF00883_consen 81 ALVGK----------GITFDTGGLSLKPSGGMEGMKYDMGGAAAVLGAMRAIAKL--KLPVNVVAVLPLAEN 140 (311)
T ss_dssp EEEEE----------EEEEEE-TTSSSCSTTGGGGGGGGHHHHHHHHHHHHHHHC--T-SSEEEEEEEEEEE
T ss_pred EEEcc----------eEEEecCCccCCCCcchhhcccCcchHHHHHHHHHHHHHc--CCCceEEEEEEcccc
Confidence 66653 334441 11122332 22258999999999999986 477889888887755
No 83
>PF05450 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastrin and presenilin are two major components of the gamma-secretase complex, which executes the intramembrane proteolysis of type I integral membrane proteins such as the amyloid precursor protein (APP) and Notch. Nicastrin is synthesised in fibroblasts and neurons as an endoglycosidase-H-sensitive glycosylated precursor protein (immature nicastrin) and is then modified by complex glycosylation in the Golgi apparatus and by sialylation in the trans-Golgi network (mature nicastrin) [].; GO: 0016485 protein processing, 0016021 integral to membrane
Probab=93.72 E-value=0.35 Score=44.79 Aligned_cols=66 Identities=21% Similarity=0.358 Sum_probs=51.8
Q ss_pred cEEEEEEecccccCcccCCCccccCCCCeeecCcch---HHHHHHHHHHHHHHcc---cccCCceEEEEEeccCC-ccch
Q 013442 106 PFVALRADMDALAMEESVEWEHKSKVPGKMHACGHD---AHVAMLLGAAKMLQVF---RHEIKGTIVLVFQPAEE-GGGG 178 (443)
Q Consensus 106 ~~I~~~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~k---g~~a~~l~a~~~l~~~---~~~l~~~i~~i~~~dEE-g~~G 178 (443)
|.|+..+.||+.-.=+ + -+.|++ .|++++|+++++|.+. ...++++|.|.|..+|- +..|
T Consensus 1 ~iIlv~armDs~s~F~-----------~--~s~GA~s~~sglvaLLaaA~aL~~~~~~~~~~~knV~F~~F~GEs~dYiG 67 (234)
T PF05450_consen 1 PIILVVARMDSFSFFH-----------D--LSPGADSSVSGLVALLAAAEALSKLLPDSSNLNKNVLFAFFNGESFDYIG 67 (234)
T ss_pred CEEEEEecccchhccc-----------C--CCCCcccchHHHHHHHHHHHHHHHhhhccccccCcEEEEEecCccccccc
Confidence 6789999999885211 2 255663 6999999999999865 23578999999999999 7789
Q ss_pred HHHHHH
Q 013442 179 AKKMLD 184 (443)
Q Consensus 179 ~~~~~~ 184 (443)
+..++.
T Consensus 68 S~R~vy 73 (234)
T PF05450_consen 68 SSRFVY 73 (234)
T ss_pred hHHHHH
Confidence 998864
No 84
>cd00433 Peptidase_M17 Cytosol aminopeptidase family, N-terminal and catalytic domains. Family M17 contains zinc- and manganese-dependent exopeptidases ( EC 3.4.11.1), including leucine aminopeptidase. They catalyze removal of amino acids from the N-terminus of a protein and play a key role in protein degradation and in the metabolism of biologically active peptides. They do not contain HEXXH motif (which is used as one of the signature patterns to group the peptidase families) in the metal-binding site. The two associated zinc ions and the active site are entirely enclosed within the C-terminal catalytic domain in leucine aminopeptidase. The enzyme is a hexamer, with the catalytic domains clustered around the three-fold axis, and the two trimers related to one another by a two-fold rotation. The N-terminal domain is structurally similar to the ADP-ribose binding Macro domain. This family includes proteins from bacteria, archaea, animals and plants.
Probab=92.95 E-value=2.1 Score=43.95 Aligned_cols=132 Identities=15% Similarity=0.150 Sum_probs=82.4
Q ss_pred HhhcCchhHHHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeec-------ccCceEEEEECCC-CCcEEEEEE
Q 013442 41 DFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFP-------VAVTGVVGYIGTG-QPPFVALRA 112 (443)
Q Consensus 41 ~~~~~~~~~~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~-------~~~~~via~~~~~-~~~~I~~~~ 112 (443)
+.++.-+...+-+.+.|+|++-|+--......++++.+.+++.|+++++. .+...+++.=.++ ..|.++..-
T Consensus 145 ~~~~~~~~~a~~~~~aRdL~n~P~n~~tP~~~a~~a~~l~~~~g~~v~V~~~~~l~~~gmg~~laVg~GS~~~p~lv~l~ 224 (468)
T cd00433 145 AALERGEAIAEGVNLARDLVNTPANDLTPTYLAEEAKELAKELGVKVEVLDEKELEELGMGALLAVGKGSEEPPRLIVLE 224 (468)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCcccCCHHHHHHHHHHHHHhcCCEEEEEcHHHHHhCCCCceeeecccCCCCCEEEEEE
Confidence 33333334467889999999999866677889999999999999999872 2233444443443 346776555
Q ss_pred ecccccCcc-----cCCCcccc----CCC-Ceeec-CcchHHHHHHHHHHHHHHcccccCCceEEEEEeccCC
Q 013442 113 DMDALAMEE-----SVEWEHKS----KVP-GKMHA-CGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (443)
Q Consensus 113 H~DtVp~~~-----~~~w~~~~----~~~-g~l~G-rG~kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE 174 (443)
+...-+... ..+-+|++ .+. .-|.+ +.-++|.|+.+++++++.+.+ ++.+|..++...|=
T Consensus 225 Y~g~~~~~~~i~LVGKGiTFDsGG~slKp~~~M~~Mk~DM~GAAaVlga~~aia~l~--~~vnV~~i~~~~EN 295 (468)
T cd00433 225 YKGKGASKKPIALVGKGITFDTGGLSLKPAAGMDGMKYDMGGAAAVLGAMKAIAELK--LPVNVVGVLPLAEN 295 (468)
T ss_pred ECCCCCCCCcEEEEcCceEecCCCccccCccChhhccccchhHHHHHHHHHHHHHcC--CCceEEEEEEeeec
Confidence 543211000 01233441 111 11211 001489999999999999864 78889888887765
No 85
>PRK05015 aminopeptidase B; Provisional
Probab=90.47 E-value=6.7 Score=39.35 Aligned_cols=120 Identities=12% Similarity=0.088 Sum_probs=72.6
Q ss_pred HHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhC---CCCeeec-------ccCceEEEEECCC-CCcEEEEEEeccccc
Q 013442 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQM---GIPYKFP-------VAVTGVVGYIGTG-QPPFVALRADMDALA 118 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~---G~~~~~~-------~~~~~via~~~~~-~~~~I~~~~H~DtVp 118 (443)
-+...+.|+|++-|+--......++...++++++ ++++++. .+...+++.=.++ ..|.++..-+ -|
T Consensus 100 ~~~~~~aRdLvn~P~n~ltP~~lA~~a~~~~~~~~~~~v~v~Vl~~~~L~~~gmggilaVgrGS~~pP~lv~L~Y---~~ 176 (424)
T PRK05015 100 LKIIDWVRDTINAPAEELGPEQLAQRAADLICSVAGDAVSYRIIKGEDLREQGYMGIHTVGRGSERPPVLLALDY---NP 176 (424)
T ss_pred HHHHHHHHHHhcCCcccCCHHHHHHHHHHHHHhhccCceEEEEeeHHHHHHCCCCceeeeeccCCCCCEEEEEEe---cC
Confidence 4578899999999997666677778888887776 5777662 2233444443444 2366663322 34
Q ss_pred CcccC----------CCcccc----CC-CCeeec-CcchHHHHHHHHHHHHHHcccccCCceEEEEEeccCC
Q 013442 119 MEESV----------EWEHKS----KV-PGKMHA-CGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (443)
Q Consensus 119 ~~~~~----------~w~~~~----~~-~g~l~G-rG~kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE 174 (443)
.++.+ +-+|++ .+ .+-|.+ +.-.+|.|+.+++++++.+. .++.+|..++...|=
T Consensus 177 ~g~~~~~v~~aLVGKGITFDSGG~sLKps~~M~~MK~DMgGAAaV~ga~~~a~~~--~l~~nV~~il~~aEN 246 (424)
T PRK05015 177 TGDPDAPVYACLVGKGITFDSGGYSIKPSAGMDSMKSDMGGAATVTGALALAITR--GLNKRVKLFLCCAEN 246 (424)
T ss_pred CCCCCCCeeEEEecCceEecCCCccCCCCcCHHHhhcchhHHHHHHHHHHHHHhc--CCCceEEEEEEeccc
Confidence 33211 222331 11 011111 00138999999999888776 488999999988866
No 86
>PRK02256 putative aminopeptidase 1; Provisional
Probab=88.16 E-value=0.66 Score=47.41 Aligned_cols=76 Identities=11% Similarity=-0.011 Sum_probs=57.3
Q ss_pred CCHHHHHHHHHHHHHhcCCcccccCC----CCCCCchHHHHHhh-cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHH
Q 013442 338 NNKNLHEHFQKVAADMLGVQNIKENR----PLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPY 412 (443)
Q Consensus 338 ~d~~~~~~~~~~~~~~~g~~~~~~~~----~~~g~tDa~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~ 412 (443)
.|..+...+++++++. +.+...... ..+|+||...+++. +|++-.+++... .|++.|-+..+++..
T Consensus 380 ~~~~~~~~i~~iA~~~-~Ip~Q~~~~~r~d~~~GgTig~~~s~~Gi~tvdiGiP~l~--------MHS~rE~~~~~D~~~ 450 (462)
T PRK02256 380 ANAEFVAEVRNLFNKN-NVVWQTAELGKVDQGGGGTIAKFLANYGMEVIDCGVALLS--------MHSPFEIASKADIYE 450 (462)
T ss_pred CCHHHHHHHHHHHHHc-CCCEEEEEeecCCCCCcChHHHHHcCCCCcEEEechhhhc--------cccHHHHhhHHHHHH
Confidence 4777888888888887 876432111 23678997777755 998877766553 999999999999999
Q ss_pred HHHHHHHHHH
Q 013442 413 GAALHASLAT 422 (443)
Q Consensus 413 ~~~~~a~~~~ 422 (443)
+++++..++.
T Consensus 451 ~~~ll~~f~~ 460 (462)
T PRK02256 451 TYKAYKAFLE 460 (462)
T ss_pred HHHHHHHHHh
Confidence 9999987753
No 87
>KOG2597 consensus Predicted aminopeptidase of the M17 family [General function prediction only]
Probab=87.93 E-value=4.9 Score=41.12 Aligned_cols=123 Identities=13% Similarity=0.115 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeec------ccCce-EEEEECCC-CCcEEEEEEecccccCcc
Q 013442 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFP------VAVTG-VVGYIGTG-QPPFVALRADMDALAMEE 121 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~------~~~~~-via~~~~~-~~~~I~~~~H~DtVp~~~ 121 (443)
.+...+.|+|..-|.--......++++.+++...|+.+++. ...-| +.+.=.++ ..|.++...|.++-|...
T Consensus 189 ~~~~~lar~l~d~PaN~Mtp~~fae~a~~~~~~~~v~v~V~~~~~i~~~~~~~~l~V~k~s~~pP~ll~lsY~g~~~~~~ 268 (513)
T KOG2597|consen 189 AAAQNLARRLGDTPANRMTPTQFAEEAVDVLCPLGVTVEVRDEEWIEEQGMNSFLAVAKASCEPPRLLELSYKGTSGADK 268 (513)
T ss_pred HHHHHHHHHhccCChhhcCHHHHHHHHHHhhcccCceEEEechHHHhhccccceeeeccccCCCCEEEEEEEcCCCCCcc
Confidence 34555666666655544455788999999999999887762 12223 33333333 347888888876644322
Q ss_pred c-----CCCcccc-----CCCCeeec-CcchHHHHHHHHHHHHHHcccccCCceEEEEEeccCC
Q 013442 122 S-----VEWEHKS-----KVPGKMHA-CGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (443)
Q Consensus 122 ~-----~~w~~~~-----~~~g~l~G-rG~kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE 174 (443)
. .+.+|++ +..+.|.+ ||.++|.|+.+++++++.+.+ ++-++.+++.-.|-
T Consensus 269 ~i~lvGKGvtfDsGGl~iK~~~~M~~mr~dm~GAA~v~~~~~a~~~l~--~~in~~~v~plcEN 330 (513)
T KOG2597|consen 269 TILLVGKGVTFDSGGLSIKPKTGMDGMRRDMGGAAVVLGAFRAAAQLS--LPINVHAVLPLCEN 330 (513)
T ss_pred eEEEEecceEEecCccccccCCChhhhhhhccccHHHHHHHHHHHhcC--CCCceEEEEeeecc
Confidence 1 1223441 11122332 333689999999999998764 66888888887766
No 88
>PTZ00412 leucyl aminopeptidase; Provisional
Probab=86.56 E-value=12 Score=38.80 Aligned_cols=126 Identities=15% Similarity=0.098 Sum_probs=77.9
Q ss_pred cCchhHHHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCee-ec-------ccCceEEEEECCC-CCcEEEEEEec
Q 013442 44 KKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYK-FP-------VAVTGVVGYIGTG-QPPFVALRADM 114 (443)
Q Consensus 44 ~~~~~~~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~-~~-------~~~~~via~~~~~-~~~~I~~~~H~ 114 (443)
+..+...+.+.+.|+|++-|+--......++++.+.+.+.|++++ +. .+...+++.=.++ ..|.++..-|.
T Consensus 206 ~~g~~ia~~vn~ARdLvn~P~N~ltP~~~Ae~a~~~~~~~g~~v~~Vl~~~~l~~~gmg~llaVgkGS~~pPrli~L~Y~ 285 (569)
T PTZ00412 206 AAGNIIGHCVNEARNLGNLREDEGVPQFYAEWIKKELAPLGIKVRKVLRGEQLEGAGLNLMYNVGKGSRHEPYLVVFEYI 285 (569)
T ss_pred HHHHHHHHHHHHHHHhccCChhhcCHHHHHHHHHHHHhhcCCEEEEEEcHHHHHHCCCcceeeeeccCCCCCEEEEEEeC
Confidence 333344567789999999998655667788888888888999996 51 2333455544444 23666655442
Q ss_pred ccccCccc--------CCCcccc----CC-CCeeec-CcchHHHHHHHHHHHHHHcccccCCceEEEEEeccCC
Q 013442 115 DALAMEES--------VEWEHKS----KV-PGKMHA-CGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (443)
Q Consensus 115 DtVp~~~~--------~~w~~~~----~~-~g~l~G-rG~kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE 174 (443)
|.... .+.+|++ .+ .+.|.. ++..+|.|+.+++++++.+. +++.+|+.++...|=
T Consensus 286 ---g~~~~~~~iaLVGKGITFDSGGisLKP~~~M~~MK~DMgGAAaVlga~~AiA~L--klpvnVv~iiplaEN 354 (569)
T PTZ00412 286 ---GNPRSSAATALVGKGVTFDCGGLNIKPYGSMETMHSDMMGAATVMCTLKAIAKL--QLPVNVVAAVGLAEN 354 (569)
T ss_pred ---CCCCCCCcEEEEcCceEEcCCCCCCCCccChhhhhccchhHHHHHHHHHHHHHc--CCCeEEEEEEEhhhc
Confidence 21110 1233441 11 011211 11148999999999999876 578899988887765
No 89
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase.
Probab=86.37 E-value=1.3 Score=45.88 Aligned_cols=45 Identities=11% Similarity=0.073 Sum_probs=40.2
Q ss_pred CCceEEEEEEEcCCcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHH
Q 013442 265 DSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQ 315 (443)
Q Consensus 265 ~~~t~~v~~i~gG~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~ 315 (443)
...|+|++.++++ |+++.+++++|++|.++++++.++|+++++..
T Consensus 336 ~~~t~n~g~i~~~------~~~~~~~i~~R~~~~~~~~~i~~~i~~~~~~~ 380 (477)
T TIGR01893 336 VESSLNLGVVKTK------ENKVIFTFLIRSSVESDKDYVTEKIESIAKLA 380 (477)
T ss_pred EEeeeeEEEEEEc------CCEEEEEEEeCCCCchhHHHHHHHHHHHhhhc
Confidence 3568999999876 78999999999999999999999999998853
No 90
>PTZ00371 aspartyl aminopeptidase; Provisional
Probab=85.62 E-value=1.7 Score=44.66 Aligned_cols=78 Identities=12% Similarity=-0.075 Sum_probs=58.7
Q ss_pred CCHHHHHHHHHHHHHhcCCcccccC--CCCCCCchHHHHHh--h-cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHH
Q 013442 338 NNKNLHEHFQKVAADMLGVQNIKEN--RPLMGTEDFSFFAE--A-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPY 412 (443)
Q Consensus 338 ~d~~~~~~~~~~~~~~~g~~~~~~~--~~~~g~tDa~~~~~--~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~ 412 (443)
.|......+++++++. |.+..... ...++++|++.+.. . +|++-++++... .|++.|-+..+++..
T Consensus 373 td~~~~a~i~~la~~~-~Ip~Q~~~~~~d~~~GsTig~i~~s~~Gi~tvDiGiP~l~--------MHS~rE~~~~~D~~~ 443 (465)
T PTZ00371 373 TNGVTASLLKAIAKKA-NIPIQEFVVKNDSPCGSTIGPILSSNLGIRTVDIGIPQLA--------MHSIREMCGVVDIYY 443 (465)
T ss_pred cCHHHHHHHHHHHHHc-CCCEEEEEecCCCCCcchHHHHHHhCCCCcEEEechhhcc--------cccHHHHccHHHHHH
Confidence 4678888999998887 77643211 23445778777655 3 898876666543 999999999999999
Q ss_pred HHHHHHHHHHHH
Q 013442 413 GAALHASLATRY 424 (443)
Q Consensus 413 ~~~~~a~~~~~l 424 (443)
+++++..++..+
T Consensus 444 ~~~l~~af~~~~ 455 (465)
T PTZ00371 444 LVKLIKAFFTNY 455 (465)
T ss_pred HHHHHHHHHHhh
Confidence 999999988754
No 91
>PRK02813 putative aminopeptidase 2; Provisional
Probab=85.50 E-value=1.2 Score=45.10 Aligned_cols=75 Identities=11% Similarity=-0.054 Sum_probs=55.5
Q ss_pred CCHHHHHHHHHHHHHhcCCcccccC--CCCCCCchHHHHHh--h-cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHH
Q 013442 338 NNKNLHEHFQKVAADMLGVQNIKEN--RPLMGTEDFSFFAE--A-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPY 412 (443)
Q Consensus 338 ~d~~~~~~~~~~~~~~~g~~~~~~~--~~~~g~tDa~~~~~--~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~ 412 (443)
.|......+++++++. +.+..... ...++++|++.+.. . +|++-.+++... .|++.|-+..+++..
T Consensus 346 t~~~~~a~~~~ia~~~-~Ip~Q~~v~~~d~~gGstig~i~~s~~Gi~tvdiGiP~l~--------MHS~~E~~~~~D~~~ 416 (428)
T PRK02813 346 TDAESAAVFKLLCEKA-GVPYQEFVNRSDMPCGSTIGPITAARLGIRTVDVGAPMLA--------MHSARELAGVKDHAY 416 (428)
T ss_pred cCHHHHHHHHHHHHHc-CCCEEEEEecCCCCCccHHHHHHHhCCCCcEEEeChhhcc--------cccHHHHccHHHHHH
Confidence 4677888888888887 77643221 12246788887755 3 888876666543 999999999999999
Q ss_pred HHHHHHHHH
Q 013442 413 GAALHASLA 421 (443)
Q Consensus 413 ~~~~~a~~~ 421 (443)
+++++..++
T Consensus 417 ~~~l~~~f~ 425 (428)
T PRK02813 417 LIKALTAFF 425 (428)
T ss_pred HHHHHHHHh
Confidence 999988765
No 92
>COG0260 PepB Leucyl aminopeptidase [Amino acid transport and metabolism]
Probab=78.00 E-value=31 Score=35.54 Aligned_cols=119 Identities=17% Similarity=0.173 Sum_probs=72.1
Q ss_pred HHHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCC-CCeeec-------ccCceEEEEECCC-CCcEEEEE---Eecc-
Q 013442 49 FYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMG-IPYKFP-------VAVTGVVGYIGTG-QPPFVALR---ADMD- 115 (443)
Q Consensus 49 ~~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G-~~~~~~-------~~~~~via~~~~~-~~~~I~~~---~H~D- 115 (443)
+-+.+.+.|+|++.|.--......++. ++.|.+.+ +++++. .+...+++.=.++ ..|.++.. ++=+
T Consensus 166 i~~~v~~aRdLvN~P~n~l~P~~la~~-a~~la~~~~v~veVl~~~~l~~~gmg~llaVg~GS~~~Prlivl~y~g~~~~ 244 (485)
T COG0260 166 IAEGVNLARDLVNTPANILTPEELAER-AELLAKLGGVKVEVLDEKDLEKLGMGALLAVGKGSARPPRLIVLEYNGKGKA 244 (485)
T ss_pred HHHHHHHHHHHhhCCcccCCHHHHHHH-HHHHhhcCCceEEEecHHHHHHcCCceeeeeccCCCCCCeEEEEEcCCCCCC
Confidence 366789999999999976666777777 77777765 787762 2233444444443 23554421 1111
Q ss_pred ccc---CcccCCCcccc----CCCC-eeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC
Q 013442 116 ALA---MEESVEWEHKS----KVPG-KMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (443)
Q Consensus 116 tVp---~~~~~~w~~~~----~~~g-~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE 174 (443)
-.| +| .+.+|++ .+.+ -| +++ .||.|+.++++.++.+. +++.+|+.+...-|=
T Consensus 245 ~~~iaLVG--KGitFDsGGisiKp~~~M--~~MK~DMgGAAaV~g~~~a~a~l--~l~vnv~~vl~~~EN 308 (485)
T COG0260 245 KKPIALVG--KGITFDSGGISIKPAAGM--DTMKYDMGGAAAVLGAMRALAEL--KLPVNVVGVLPAVEN 308 (485)
T ss_pred CceEEEEc--CceeecCCCcccCCccch--hhhhcccchHHHHHHHHHHHHHc--CCCceEEEEEeeecc
Confidence 111 11 1334441 1111 11 122 38999999999999886 588888888887765
No 93
>COG4882 Predicted aminopeptidase, Iap family [General function prediction only]
Probab=51.70 E-value=39 Score=33.16 Aligned_cols=70 Identities=24% Similarity=0.209 Sum_probs=41.3
Q ss_pred eEEEEECCCCCcEEEEEEecccccCcccCCCccccCCCCeeecCcchHHHHHHHHHHHHHHcccccCCceEEEEEeccCC
Q 013442 95 GVVGYIGTGQPPFVALRADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (443)
Q Consensus 95 ~via~~~~~~~~~I~~~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE 174 (443)
++|+.-++ .++++++.+|.|+=..|. .|+. .|+++++.++..|...+ ++ ..++.-+.||
T Consensus 180 ~~Ia~~~~-en~vv~i~AH~DHW~~G~---------tDN~-------lg~~~AV~~~~~lr~~~--~~--~~lv~FtAEE 238 (486)
T COG4882 180 NVIAVDGG-ENGVVLIGAHLDHWYTGF---------TDNI-------LGVAQAVETAGRLRGRG--LA--AGLVVFTAEE 238 (486)
T ss_pred EEEEecCC-CCCceEEeechhhhhhcc---------cchh-------hhHHHHHHHHHHHhhcC--cc--eeEEEEeccc
Confidence 34443333 347899999999765554 2333 36778888888787654 22 3343344566
Q ss_pred -cc---------chHHHHHHc
Q 013442 175 -GG---------GGAKKMLDA 185 (443)
Q Consensus 175 -g~---------~G~~~~~~~ 185 (443)
|+ .|++.++++
T Consensus 239 ~g~p~~~sfyWa~GSr~~lk~ 259 (486)
T COG4882 239 HGMPGMASFYWAAGSRGLLKE 259 (486)
T ss_pred cCCCCCcceeecccchHHHhh
Confidence 54 466666654
No 94
>cd06406 PB1_P67 A PB1 domain is present in p67 proteins which forms a signaling complex with p40, a crucial step for activation of NADPH oxidase during phagocytosis. PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes . A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is conserved in amoebas, fungi, animals, and plants. The p67 proteins contain
Probab=45.80 E-value=38 Score=25.59 Aligned_cols=56 Identities=11% Similarity=0.103 Sum_probs=37.5
Q ss_pred cEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeec--cCCCCcccCCHHHHHHH
Q 013442 286 SVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDD--KSFYPVTVNNKNLHEHF 346 (443)
Q Consensus 286 ~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~d~~~~~~~ 346 (443)
+.+..|-+|.+++.+..++.++|.+.++-. +-.+.+.+.. .....+. .|..+-.++
T Consensus 8 ~f~~tIaIrvp~~~~y~~L~~ki~~kLkl~----~e~i~LsYkde~s~~~v~l-~d~dle~aw 65 (80)
T cd06406 8 HFKYTVAIQVARGLSYATLLQKISSKLELP----AEHITLSYKSEASGEDVIL-SDTNMEDVW 65 (80)
T ss_pred EEEEEEEEEcCCCCCHHHHHHHHHHHhCCC----chhcEEEeccCCCCCccCc-ChHHHHHHH
Confidence 456689999999999999999999988742 2235555533 2344444 555554444
No 95
>cd06408 PB1_NoxR The PB1 domain is present in the Epichloe festucae NoxR protein (NADPH oxidase regulator), a key regulator of NADPH oxidase isoform, NoxA. NoxA is essential for growth control of the fungal endophyte in plant tissue in the process of symbiotic interaction between a fungi and its plant host. The Epichloe festucae p67(phox)-like regulator, NoxR, dispensable in culture but essential in plants for the symbiotic interaction. Plants infected with a noxR deletion mutant show severe stunting and premature senescence, whereas hyphae in the meristematic tissues show increased branching leading to increased fungal colonization of pseudostem and leaf blade tissue. The PB1 domain is a modular domain mediating specific protein-protein interactions which a play role in many critical cell processes such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is
Probab=45.36 E-value=96 Score=23.81 Aligned_cols=54 Identities=6% Similarity=0.045 Sum_probs=37.2
Q ss_pred EEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcccCCHHHHHHHHHH
Q 013442 291 GTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKV 349 (443)
Q Consensus 291 ~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~ 349 (443)
..+|.+|....+++.++|++.+.- ...+.+.|.+...+.....+.++-.+++.+
T Consensus 14 ~~i~v~~~i~f~dL~~kIrdkf~~-----~~~~~iKykDEGD~iti~sq~DLd~Ai~~a 67 (86)
T cd06408 14 RYIMIGPDTGFADFEDKIRDKFGF-----KRRLKIKMKDDGDMITMGDQDDLDMAIDTA 67 (86)
T ss_pred EEEEcCCCCCHHHHHHHHHHHhCC-----CCceEEEEEcCCCCccccCHHHHHHHHHHH
Confidence 567889999999999999998762 347888886553333334455665555544
No 96
>COG1333 ResB ResB protein required for cytochrome c biosynthesis [Posttranslational modification, protein turnover, chaperones]
Probab=44.70 E-value=58 Score=33.21 Aligned_cols=83 Identities=10% Similarity=-0.027 Sum_probs=48.4
Q ss_pred hhhHHHHHHHHHHhhcCCcccCCCCCcccccccchHHHHhhcCchhHHHHHHHHHHHHhCCCC--CcccHHHHHHHHHHH
Q 013442 3 SSKLLSLLVTLYLLAPTSISSDVSLSPEELTQIPVKFLDFAKKPEIFYWMVNIRRKIHENPEL--GFQEFETSKLIRAEL 80 (443)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~l~~ipS~--s~~E~~~~~~l~~~l 80 (443)
|+-++.+++..+++|++- ..++ +...+++.- -..-..++.+-..-+. ...+..+.+.++..|
T Consensus 59 fl~iivlL~VSLv~C~lp----r~~~------~~ra~r~~~------~~~p~~l~r~~h~~~~~v~~~~~~~~~~i~~~L 122 (478)
T COG1333 59 FLAIIVLLGVSLVGCSLP----RFPA------LYRALRAKP------VRAPRNLARLRHSAELDVKIDPEAVKAKIEKLL 122 (478)
T ss_pred HHHHHHHHHHHHHhhccc----ccHH------HHHHhhccc------ccCchhHHhhhccCccccCCchHHHHHHHHHHH
Confidence 556778888888899883 1111 222232221 0111224444333332 234566899999999
Q ss_pred HhCCCCeeecccCceEEEEECC
Q 013442 81 DQMGIPYKFPVAVTGVVGYIGT 102 (443)
Q Consensus 81 ~~~G~~~~~~~~~~~via~~~~ 102 (443)
++.|+.++..+ ..++.|+.+-
T Consensus 123 ~~~~~kir~e~-~~~i~AeKG~ 143 (478)
T COG1333 123 RGKGYKIREEG-SVSIAAEKGR 143 (478)
T ss_pred hcCCeEEEecc-ceeEEecccc
Confidence 99999987653 4567777653
No 97
>PF06675 DUF1177: Protein of unknown function (DUF1177); InterPro: IPR009561 This family consists of several hypothetical archaeal and bacterial proteins of around 300 residues in length. The function of this family is unknown.
Probab=39.74 E-value=60 Score=30.10 Aligned_cols=82 Identities=15% Similarity=0.227 Sum_probs=51.2
Q ss_pred CcEEEEEEecccccCcccCCCccccCCCCeeecC--cchHHHHHHHHHHHHH--HcccccCCceEEEEEeccCC--c---
Q 013442 105 PPFVALRADMDALAMEESVEWEHKSKVPGKMHAC--GHDAHVAMLLGAAKML--QVFRHEIKGTIVLVFQPAEE--G--- 175 (443)
Q Consensus 105 ~~~I~~~~H~DtVp~~~~~~w~~~~~~~g~l~Gr--G~kg~~a~~l~a~~~l--~~~~~~l~~~i~~i~~~dEE--g--- 175 (443)
.|++.+.|-+=-+-+-. .+ .|. ..||.++++..|++.+ ++.|..|+++|.+.---.-- .
T Consensus 31 aptlGIiGRLGgigARP-----------~~-iGlVSDaDGAi~ala~a~KL~~M~~kGd~L~GDVii~ThIcp~Apt~PH 98 (276)
T PF06675_consen 31 APTLGIIGRLGGIGARP-----------ER-IGLVSDADGAIAALAAALKLLDMQAKGDVLPGDVIITTHICPDAPTRPH 98 (276)
T ss_pred CCeeEEEeecccccccc-----------cc-eeeeecCchHHHHHHHHHHHHHHHHcCCccCCcEEEEEecCCCCCCCCC
Confidence 48999887765553221 11 111 1267888888888765 46788999999986542222 1
Q ss_pred --------cchHHHHHHcCCCCccceeeEec
Q 013442 176 --------GGGAKKMLDAGALENVEAIFGLH 198 (443)
Q Consensus 176 --------~~G~~~~~~~g~~~~~d~~i~~~ 198 (443)
..+...+.+.......|+++..+
T Consensus 99 ~PvpFM~sPv~~~~~n~~EV~p~mdAILSiD 129 (276)
T PF06675_consen 99 DPVPFMGSPVDMATMNRHEVDPEMDAILSID 129 (276)
T ss_pred CCcccccCccCHHHHHHhhcCcccceEEEEe
Confidence 14556665655555788998764
No 98
>PF13956 Ibs_toxin: Toxin Ibs, type I toxin-antitoxin system
Probab=36.79 E-value=20 Score=18.68 Aligned_cols=12 Identities=33% Similarity=0.537 Sum_probs=5.8
Q ss_pred hhHHHH-HHHHHH
Q 013442 4 SKLLSL-LVTLYL 15 (443)
Q Consensus 4 ~~~~~~-~~~~~~ 15 (443)
||..++ ++++++
T Consensus 2 Mk~vIIlvvLLli 14 (19)
T PF13956_consen 2 MKLVIILVVLLLI 14 (19)
T ss_pred ceehHHHHHHHhc
Confidence 677444 444443
No 99
>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism]
Probab=36.12 E-value=2e+02 Score=29.34 Aligned_cols=119 Identities=22% Similarity=0.243 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcc------cCCHHHHHHHHHHHHHh---cCCcccccCCCCCCCch
Q 013442 300 SIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVT------VNNKNLHEHFQKVAADM---LGVQNIKENRPLMGTED 370 (443)
Q Consensus 300 ~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~------~~d~~~~~~~~~~~~~~---~g~~~~~~~~~~~g~tD 370 (443)
+....-.++.+++...+...+..+-+.+- .+.||+. .+|..+...++++.+.. .|+.-+ ..+.++|-+|
T Consensus 391 d~r~~s~~~~~~L~~l~~~~gp~iVlffa-pp~yP~n~L~~~~~~dq~l~~~i~~~~~~~~e~~G~t~~-~~~~FpglSD 468 (553)
T COG4187 391 DLRLRSTQLTEWLVGLAGLSGPAIVLFFA-PPHYPHNTLRVASGNDQLLHNAIKEAAAGLGEDPGETLI-EKPFFPGLSD 468 (553)
T ss_pred CchHHHHHHHHHHHhhccccCCeEEEEec-CCCCCcchhcccCcchHHHHHHHHHHHHHhhhccCceeE-EeeccCcccc
Confidence 33444456667776666655655555541 3445422 23445666666665554 233222 2245666777
Q ss_pred HHHHHh-----------------------------h-cCcEEEEecCCCCCCCCCCCCCCCCCCCCC-CchHHHHHHHHH
Q 013442 371 FSFFAE-----------------------------A-IPGYFYYLGMNDETKGKFETGHSPYFRVNE-DALPYGAALHAS 419 (443)
Q Consensus 371 a~~~~~-----------------------------~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i-~~l~~~~~~~a~ 419 (443)
++++.- . +|++ -+|+.+.+ .|..-|++-. -++.---+++-.
T Consensus 469 ~S~l~l~~s~~i~a~t~N~P~~~r~~~~P~~~i~~L~iP~i--N~Gp~GkD------~HkwtERvy~PYsF~VLP~Lvs~ 540 (553)
T COG4187 469 MSFLGLADSQEIDAVTSNTPGWNRLYDRPSEKIQALNIPTI--NLGPWGKD------FHKWTERVYKPYSFEVLPELVSE 540 (553)
T ss_pred cccccccccccccchhcCCcchhhccCCCccccccccCcee--ecccccCc------HHHHHHHhcCCcchhhhHHHHHH
Confidence 776531 0 3333 35777655 8999998863 244444566666
Q ss_pred HHHHHHhhc
Q 013442 420 LATRYLLEN 428 (443)
Q Consensus 420 ~~~~l~~~~ 428 (443)
++..++++.
T Consensus 541 t~~~fL~~~ 549 (553)
T COG4187 541 TTEAFLGDD 549 (553)
T ss_pred HHHHHhhhc
Confidence 777777654
No 100
>PRK06156 hypothetical protein; Provisional
Probab=33.85 E-value=2.5e+02 Score=29.41 Aligned_cols=25 Identities=20% Similarity=0.268 Sum_probs=21.7
Q ss_pred eEEEEEEEcCCcCccccCcEEEEEE
Q 013442 268 VLTVAKFEGGGAFNIIPDSVTIGGT 292 (443)
Q Consensus 268 t~~v~~i~gG~~~n~vP~~a~~~~d 292 (443)
+.++..++||...|+||+.|.+.+.
T Consensus 240 ~~~l~~~~gG~~~n~ip~~a~~~~~ 264 (520)
T PRK06156 240 GAEIVAMTGGAFANQIPQTAVATLS 264 (520)
T ss_pred ceeEEEEEcCCcCCCCCCccEEEEe
Confidence 5678899999999999999998733
No 101
>PRK02256 putative aminopeptidase 1; Provisional
Probab=32.66 E-value=71 Score=32.89 Aligned_cols=44 Identities=27% Similarity=0.305 Sum_probs=29.7
Q ss_pred CeeecCcch--HHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchHH
Q 013442 133 GKMHACGHD--AHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAK 180 (443)
Q Consensus 133 g~l~GrG~k--g~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~ 180 (443)
..|.|.+-| .++.+++.++..++ .++..+.++++..|| |+.|++
T Consensus 252 efI~s~rLDNr~~~~~~leal~~~~----~~~~~~~~~~~dqEEVGs~ga~ 298 (462)
T PRK02256 252 SLIGAYGQDDRVCAYTSLEALLELE----NPEKTAVVLLVDKEEIGSEGNT 298 (462)
T ss_pred ceeeccccccHHHHHHHHHHHHhcc----cCCCeEEEEEEcccccCCcchh
Confidence 345555553 57777777766543 356789999999999 765544
No 102
>PRK15026 aminoacyl-histidine dipeptidase; Provisional
Probab=32.31 E-value=82 Score=32.67 Aligned_cols=43 Identities=12% Similarity=0.097 Sum_probs=35.3
Q ss_pred ceEEEEEEEcCCcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHH
Q 013442 267 QVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQ 315 (443)
Q Consensus 267 ~t~~v~~i~gG~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~ 315 (443)
+|+|++.++ .--+.+++.+++|+++..+.+++.++|+...+..
T Consensus 344 ~S~Nlg~v~------~~~~~~~i~~~~Rs~~~~~~~~i~~~i~~~~~~~ 386 (485)
T PRK15026 344 TSLNVGVVT------MTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLA 386 (485)
T ss_pred eeeEEEEEE------EeCCEEEEEEEecCCCchHHHHHHHHHHHHHHHc
Confidence 567777764 3346799999999999999999999999987654
No 103
>PRK02813 putative aminopeptidase 2; Provisional
Probab=29.12 E-value=71 Score=32.56 Aligned_cols=43 Identities=26% Similarity=0.159 Sum_probs=28.2
Q ss_pred eeecCcch--HHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccc---hHHH
Q 013442 134 KMHACGHD--AHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGG---GAKK 181 (443)
Q Consensus 134 ~l~GrG~k--g~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~---G~~~ 181 (443)
.+.|.+.| .++.+++.++..+++ +..++++++..|| |+. |++.
T Consensus 227 ~i~s~~lDnr~~~~~~l~al~~~~~-----~~~~~~~~~d~EEVGs~~~~GA~s 275 (428)
T PRK02813 227 FISSGRLDNLSSCHAGLEALLAAAS-----DATNVLAAFDHEEVGSATKQGADS 275 (428)
T ss_pred EEEEecchhHHHHHHHHHHHHhcCC-----CCeEEEEEEecCccCCCCCcccCc
Confidence 44455543 466666666554432 6789999999999 765 7763
No 104
>PRK13883 conjugal transfer protein TrbH; Provisional
Probab=28.19 E-value=2.6e+02 Score=23.95 Aligned_cols=20 Identities=10% Similarity=-0.034 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHhCCCCeee
Q 013442 70 FETSKLIRAELDQMGIPYKF 89 (443)
Q Consensus 70 ~~~~~~l~~~l~~~G~~~~~ 89 (443)
......|.+-||++|+-+..
T Consensus 63 D~Fg~aL~~aLR~~GYaV~e 82 (151)
T PRK13883 63 DAFGQALVKALRDKGYALLE 82 (151)
T ss_pred cHHHHHHHHHHHHcCeEEEe
Confidence 36688999999999998865
No 105
>TIGR01887 dipeptidaselike dipeptidase, putative. This model represents a clade of probable zinc dipeptidases, closely related to the characterized non-specific dipeptidase, PepV. Many enzymes in this clade have been given names including the terms "Xaa-His" and "carnosinase" due to the early mis-characterization of the Lactobacillus delbrueckii PepV enzyme. These names are likely too specific.
Probab=27.69 E-value=2.7e+02 Score=28.50 Aligned_cols=27 Identities=30% Similarity=0.521 Sum_probs=23.1
Q ss_pred EEEEEEEcCCcCccccCcEEEEEEEec
Q 013442 269 LTVAKFEGGGAFNIIPDSVTIGGTFRA 295 (443)
Q Consensus 269 ~~v~~i~gG~~~n~vP~~a~~~~diR~ 295 (443)
+.+..|.+|...|.+|..|++.+-.+.
T Consensus 191 ~~i~~~~~Ge~tn~~p~~a~~~v~~~~ 217 (447)
T TIGR01887 191 VVLESFKAGEAFNMVPDHATAVISGKE 217 (447)
T ss_pred eeEEEEeCCCcCCccCcceEEEEeccc
Confidence 456778899999999999999997774
No 106
>cd06411 PB1_p51 The PB1 domain is present in the p51 protein, a homolog of the p67 protein. p51 plays an important role in NADPH oxidase activation during phagosytosis. The PB1 domain is a modular domain mediating specific protein-protein interaction in many critical cell processes such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain mo
Probab=27.68 E-value=88 Score=23.51 Aligned_cols=32 Identities=16% Similarity=0.203 Sum_probs=27.9
Q ss_pred cEEEEEEEecCChHHHHHHHHHHHHHHHHHHH
Q 013442 286 SVTIGGTFRAFSKESIIQLKQRIEEVVMKQAS 317 (443)
Q Consensus 286 ~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~ 317 (443)
+|+++|-+|.+++.+...+...|.+.+...+.
T Consensus 4 h~~fTVai~v~~g~~y~~L~~~ls~kL~l~~~ 35 (78)
T cd06411 4 QCAFTVALRAPRGADVSSLRALLSQALPQQAQ 35 (78)
T ss_pred EEEEEEEEEccCCCCHHHHHHHHHHHhcCChh
Confidence 68899999999999999999999999875443
No 107
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism]
Probab=26.97 E-value=83 Score=31.85 Aligned_cols=68 Identities=19% Similarity=0.189 Sum_probs=40.3
Q ss_pred cEEEEEEecccccC-cccCCCccc------cCCCCeee-cCcchH-HHHHHHHHHHHHHcccccCCceEEEEEeccCC-c
Q 013442 106 PFVALRADMDALAM-EESVEWEHK------SKVPGKMH-ACGHDA-HVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-G 175 (443)
Q Consensus 106 ~~I~~~~H~DtVp~-~~~~~w~~~------~~~~g~l~-GrG~kg-~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g 175 (443)
..+.|.||+|.||. +......+. .+++.++- .+|++- +++..+ ..|. .-..++...++++|| +
T Consensus 62 ~~~~L~a~~d~V~~i~~~sh~Dt~~d~~~~~v~~~~l~~~~Gad~i~~~~~~---a~L~----~~~~P~~~~~t~~~ei~ 134 (414)
T COG2195 62 VPAVLQAHLDMVPEIGFISHHDTVPDPIGPNVNPQILKATLGADNIGLAIGL---AVLS----PEHFPLEVLLTGDEEIT 134 (414)
T ss_pred eeEEeeccccccccccccccccccccccccccCCceeeeccCcchhhhhhHH---hhcC----cccCCceeeeecceEEe
Confidence 56789999999984 443333333 24455565 566533 222222 2222 135778999999999 6
Q ss_pred cchHH
Q 013442 176 GGGAK 180 (443)
Q Consensus 176 ~~G~~ 180 (443)
..|+.
T Consensus 135 ~dGa~ 139 (414)
T COG2195 135 TDGAT 139 (414)
T ss_pred ccCcc
Confidence 56664
No 108
>PF03032 Brevenin: Brevenin/esculentin/gaegurin/rugosin family; InterPro: IPR004275 In addition to the highly specific cell-mediated immune system, vertebrates possess an efficient host-defence mechanism against invading microorganisms which involves the synthesis of highly potent antimicrobial peptides with a large spectrum of activity. This entry represents a number of these defence peptides secreted from the skin of amphibians, including the opiate-like dermorphins and deltorphins, and the antimicrobial dermoseptins and temporins.; GO: 0006952 defense response, 0042742 defense response to bacterium, 0005576 extracellular region
Probab=26.96 E-value=52 Score=21.99 Aligned_cols=22 Identities=18% Similarity=0.101 Sum_probs=15.7
Q ss_pred hhhHHHHHHHHHHhhcCCcccC
Q 013442 3 SSKLLSLLVTLYLLAPTSISSD 24 (443)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~ 24 (443)
+||+++++++.+=+.|++.-.+
T Consensus 2 tlKKsllLlfflG~ISlSlCee 23 (46)
T PF03032_consen 2 TLKKSLLLLFFLGTISLSLCEE 23 (46)
T ss_pred cchHHHHHHHHHHHcccchHHH
Confidence 5888888877777777774443
No 109
>PF03755 YicC_N: YicC-like family, N-terminal region ; InterPro: IPR013527 Proteins in this entry are homologues of YicC (P23839 from SWISSPROT) from Escherichia coli. Although it is relatively poorly characterised YicC has been shown to be important for cells in the stationary phase, and essential for growth at high temperatures []. This domain is found at the N-terminal region of these proteins.
Probab=26.42 E-value=3.5e+02 Score=23.21 Aligned_cols=64 Identities=13% Similarity=0.177 Sum_probs=36.0
Q ss_pred EEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccC-CCCcccCCHHHHHHHHHHHHHh
Q 013442 288 TIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKS-FYPVTVNNKNLHEHFQKVAADM 353 (443)
Q Consensus 288 ~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~d~~~~~~~~~~~~~~ 353 (443)
.+.+.+|+|.. ...++..|++.+.+....-.+++.+...... ......-|.++++...++.+++
T Consensus 30 ~Ldi~~rlP~~--l~~lE~~ir~~i~~~l~RGkV~v~i~~~~~~~~~~~~~in~~l~~~y~~~l~~l 94 (159)
T PF03755_consen 30 FLDISIRLPRE--LSSLEPEIRKLIRKKLSRGKVEVSIRVERSSESAVELRINEELAKAYYEALKEL 94 (159)
T ss_pred ceeeEEeCCHH--HHHHHHHHHHHHHHhcccceEEEEEEEEECcccCCCcccCHHHHHHHHHHHHHH
Confidence 35677777754 4466777777777654422344444442222 2334455777666666666554
No 110
>KOG3566 consensus Glycosylphosphatidylinositol anchor attachment protein GAA1 [Posttranslational modification, protein turnover, chaperones]
Probab=25.43 E-value=8.3e+02 Score=25.90 Aligned_cols=90 Identities=19% Similarity=0.254 Sum_probs=57.4
Q ss_pred HHHHHHHHhCCCCeeecc---------cCceEEEEECCC--CC-cEEEEEEecccccCcccCCCccccCCCCeeecCcch
Q 013442 74 KLIRAELDQMGIPYKFPV---------AVTGVVGYIGTG--QP-PFVALRADMDALAMEESVEWEHKSKVPGKMHACGHD 141 (443)
Q Consensus 74 ~~l~~~l~~~G~~~~~~~---------~~~~via~~~~~--~~-~~I~~~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~k 141 (443)
.++...+++.|.++.... .+.|+++.+.+. ++ ..+++ +||.+..++ + ..
T Consensus 92 ~~~~~~~q~FGl~t~~~n~~~~P~e~y~G~NvyGilRAPRgdgtEsivl-----~vP~~~~~~--------~------~~ 152 (617)
T KOG3566|consen 92 AWAEVSMQEFGLETHTQNYSNGPFEEYSGENVYGILRAPRGDGTESIVL-----VVPYGRSSG--------S------NS 152 (617)
T ss_pred hHHHHHHHHhCccccccCccCCchhhcCCceEEEEEecCCCCCcceEEE-----EEecccCCC--------c------ch
Confidence 446677777788765422 267999999542 22 56766 477433110 1 14
Q ss_pred HHHHHHHHHHHHHHcccccCCceEEEEEeccCCccchHHHHHHc
Q 013442 142 AHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGGGAKKMLDA 185 (443)
Q Consensus 142 g~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEEg~~G~~~~~~~ 185 (443)
++++.+++.++.+++. .-..++|+++++-++- .|...++++
T Consensus 153 ~~v~l~lsla~~f~r~-~yWsKDII~v~~d~~~--~g~~AwLea 193 (617)
T KOG3566|consen 153 ASVALLLSLADYFSRW-VYWSKDIIFVFTDGPA--LGLDAWLEA 193 (617)
T ss_pred hHHHHHHHHHHHhcCC-eeecccEEEEEeCCcc--ccHHHHHHH
Confidence 5777778778888765 3788999999996633 455655553
No 111
>PF08139 LPAM_1: Prokaryotic membrane lipoprotein lipid attachment site; InterPro: IPR012640 In prokaryotes, membrane lipoproteins are synthesized with a precursor signal peptide, which is cleaved by a specific lipoprotein signal peptidase (signal peptidase II). The peptidase recognises a conserved sequence and cuts upstream of a cysteine residue to which a glyceride-fatty acid lipid is attached [,]. This lipid attachment site is found in homologues of the VirB proteins of type IV secretion systems (T4SS). Conjugal transfer across the cell envelope of Gram-negative bacteria is mediated by a supramolecular structure termed mating pair formation (Mpf) complex. Collectively, secretion pathways ancestrally related to bacterial conjugation systems are now known as T4SS. T4SS are involved in the delivery of effector molecules to eukaryotic target cells; each of these systems exports distinct DNA or protein substrates to effect a myriad of changes in host cell physiology during infection [].
Probab=25.32 E-value=75 Score=18.25 Aligned_cols=13 Identities=8% Similarity=0.002 Sum_probs=7.5
Q ss_pred hhhHHHHHHHHHH
Q 013442 3 SSKLLSLLVTLYL 15 (443)
Q Consensus 3 ~~~~~~~~~~~~~ 15 (443)
+||+++++++.++
T Consensus 6 mmKkil~~l~a~~ 18 (25)
T PF08139_consen 6 MMKKILFPLLALF 18 (25)
T ss_pred HHHHHHHHHHHHH
Confidence 5677655555444
No 112
>PF04114 Gaa1: Gaa1-like, GPI transamidase component ; InterPro: IPR007246 GPI (glycosyl phosphatidyl inositol) transamidase is a multiprotein complex required for a terminal step of adding the glycosylphosphatidylinositol (GPI) anchor attachment onto proteins. Gpi16, Gpi8 and Gaa1 form a sub-complex of the GPI transamidase.; GO: 0016021 integral to membrane, 0042765 GPI-anchor transamidase complex
Probab=23.72 E-value=3.3e+02 Score=28.46 Aligned_cols=72 Identities=21% Similarity=0.221 Sum_probs=49.4
Q ss_pred CceEEEEECCC--CC-cEEEEEEecccccCcccCCCccccCCCCeeecCcchHHHHHHHHHHHHHHcccccCCceEEEEE
Q 013442 93 VTGVVGYIGTG--QP-PFVALRADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVF 169 (443)
Q Consensus 93 ~~~via~~~~~--~~-~~I~~~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~kg~~a~~l~a~~~l~~~~~~l~~~i~~i~ 169 (443)
+.|++|.+... ++ ..+++..-++..- + ....++++.+++.++++++.. -+.++|.|++
T Consensus 3 G~nvy~i~rapR~d~tEaivl~~~~~~~~--------------~----~~n~~~v~l~lal~~~~~~~~-~wsKDii~l~ 63 (504)
T PF04114_consen 3 GTNVYGILRAPRGDGTEAIVLVVPWRDSD--------------G----EYNAGGVALALALARYFRRQS-YWSKDIIFLF 63 (504)
T ss_pred ceEEEEEEecCCCCCceeEEEEEecCCCC--------------c----ccchhhHHHHHHHHHHhhhch-hhhccEEEEe
Confidence 56899988542 22 6777765443211 1 111468899999999999864 6699999999
Q ss_pred eccCCccchHHHHHHc
Q 013442 170 QPAEEGGGGAKKMLDA 185 (443)
Q Consensus 170 ~~dEEg~~G~~~~~~~ 185 (443)
+.+|. .|.+..+++
T Consensus 64 ~~~~~--~g~~awl~~ 77 (504)
T PF04114_consen 64 TDDEL--AGMQAWLEA 77 (504)
T ss_pred cCCcc--hHHHHHHHH
Confidence 86544 577877765
No 113
>PTZ00264 circumsporozoite-related antigen; Provisional
Probab=22.44 E-value=1.5e+02 Score=24.07 Aligned_cols=14 Identities=36% Similarity=0.406 Sum_probs=8.3
Q ss_pred hhHHHHHHHHHHhh
Q 013442 4 SKLLSLLVTLYLLA 17 (443)
Q Consensus 4 ~~~~~~~~~~~~~~ 17 (443)
||++..+|+||.+|
T Consensus 1 mkils~vFllF~~i 14 (148)
T PTZ00264 1 MKLLSAVFLLFCAI 14 (148)
T ss_pred ChHHHHHHHHHHHH
Confidence 67765555555544
No 114
>PF05452 Clavanin: Clavanin; InterPro: IPR008453 This family consists of clavanin proteins from the haemocytes of the invertebrate Styela clava (Sea squirt), a solitary tunicate. The family is made up of four alpha-helical antimicrobial peptides, clavanins A, B, C and D. The tunicate peptides resemble magainins in size, primary sequence and antibacterial activity. Synthetic clavanin A displays comparable antimicrobial activity to magainins and cecropins. The presence of alpha-helical antimicrobial peptides in the haemocytes of a urochordate suggests that such peptides are primeval effectors of innate immunity in the vertebrate lineage [].; GO: 0005576 extracellular region
Probab=21.36 E-value=83 Score=22.63 Aligned_cols=11 Identities=18% Similarity=0.353 Sum_probs=5.5
Q ss_pred hhHHHHHHHHH
Q 013442 4 SKLLSLLVTLY 14 (443)
Q Consensus 4 ~~~~~~~~~~~ 14 (443)
||-.+++++++
T Consensus 1 mkt~ilillil 11 (80)
T PF05452_consen 1 MKTIILILLIL 11 (80)
T ss_pred CceeehhHHHH
Confidence 45545544444
No 115
>TIGR01004 PulS_OutS lipoprotein, PulS/OutS family. This family comprises lipoproteins from four gamma proteobacterial species: PulS protein of Klebsiella pneumoniae, the OutS protein of Erwinia chrysanthemi and Pectobacterium chrysanthemi, and the functionally uncharacterized E. coli protein EtpO. PulS and OutS have been shown to interact with and facilitate insertion of secretins into the outer membrane, suggesting a chaperone-like, or piloting function for members of this family.
Probab=20.76 E-value=2.7e+02 Score=23.06 Aligned_cols=34 Identities=9% Similarity=-0.107 Sum_probs=19.7
Q ss_pred HHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCee
Q 013442 54 NIRRKIHENPELGFQEFETSKLIRAELDQMGIPYK 88 (443)
Q Consensus 54 ~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~ 88 (443)
.+|+.=++.--+ ++|..+..-+....++.|++..
T Consensus 50 ~YLK~~C~rsdi-Pd~~~I~raai~~A~~~gWd~~ 83 (128)
T TIGR01004 50 RYLKMQCNRSDL-PDDGSILKTANNVAIGKGWDSG 83 (128)
T ss_pred HHHHhcCCcccC-CcHHHHHHHHHHHHHHcCCchh
Confidence 344444443333 4555566777777788888654
No 116
>COG4635 HemG Flavodoxin [Energy production and conversion / Coenzyme metabolism]
Probab=20.63 E-value=54 Score=28.34 Aligned_cols=32 Identities=16% Similarity=0.119 Sum_probs=26.2
Q ss_pred HHhCCCCCcccHHHHHHHHHHHHhCCCCeeec
Q 013442 59 IHENPELGFQEFETSKLIRAELDQMGIPYKFP 90 (443)
Q Consensus 59 l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~ 90 (443)
|+-.-+..|+-++++++++..|++.|.+++..
T Consensus 4 LIlYstr~GqT~kIA~~iA~~L~e~g~qvdi~ 35 (175)
T COG4635 4 LILYSTRDGQTRKIAEYIASHLRESGIQVDIQ 35 (175)
T ss_pred EEEEecCCCcHHHHHHHHHHHhhhcCCeeeee
Confidence 34445666788999999999999999998764
No 117
>PF11912 DUF3430: Protein of unknown function (DUF3430); InterPro: IPR021837 This family of proteins are functionally uncharacterised. This protein is found in eukaryotes. Proteins in this family are typically between 209 to 265 amino acids in length.
Probab=20.57 E-value=58 Score=29.29 Aligned_cols=16 Identities=44% Similarity=0.420 Sum_probs=9.0
Q ss_pred hhHHHHHHHHHHhhcC
Q 013442 4 SKLLSLLVTLYLLAPT 19 (443)
Q Consensus 4 ~~~~~~~~~~~~~~~~ 19 (443)
||++++|++|+++...
T Consensus 1 MKll~~lilli~~~~~ 16 (212)
T PF11912_consen 1 MKLLISLILLILLIIN 16 (212)
T ss_pred CcHHHHHHHHHHHHHh
Confidence 8996555555444433
No 118
>PRK13835 conjugal transfer protein TrbH; Provisional
Probab=20.01 E-value=4.8e+02 Score=22.19 Aligned_cols=38 Identities=13% Similarity=-0.113 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHhCCCCCc------ccHHHHHHHHHHHHhCCCCeee
Q 013442 50 YWMVNIRRKIHENPELGF------QEFETSKLIRAELDQMGIPYKF 89 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~------~E~~~~~~l~~~l~~~G~~~~~ 89 (443)
.+++..|.+.+ |.-+. +-......|++-||.+|+.+..
T Consensus 44 ~D~vsqLae~~--pPa~tt~~l~q~~d~Fg~aL~~aLr~~GYaVvt 87 (145)
T PRK13835 44 GDMVSRLAEQI--GPGTTTIKLKKDTSPFGQALEAALKGWGYAVVT 87 (145)
T ss_pred HHHHHHHHHhc--CCCceEEEEeecCcHHHHHHHHHHHhcCeEEee
Confidence 56666666653 33221 1246678899999999998764
Done!