Query 013442
Match_columns 443
No_of_seqs 160 out of 1664
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 10:39:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013442.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013442hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xmb_A IAA-amino acid hydrolas 100.0 3.5E-62 1.2E-66 493.4 37.8 392 35-431 13-408 (418)
2 1ysj_A Protein YXEP; M20 famil 100.0 1.3E-59 4.4E-64 472.6 42.2 368 50-427 32-402 (404)
3 3io1_A Aminobenzoyl-glutamate 100.0 4E-60 1.4E-64 481.6 36.0 381 37-430 3-437 (445)
4 3pfo_A Putative acetylornithin 100.0 8.5E-55 2.9E-59 441.7 32.0 370 35-427 13-430 (433)
5 3ram_A HMRA protein; two-domai 100.0 1.6E-53 5.5E-58 426.5 32.8 359 36-428 4-376 (394)
6 1cg2_A Carboxypeptidase G2; me 100.0 2.5E-53 8.4E-58 425.6 29.9 368 33-426 4-391 (393)
7 1vgy_A Succinyl-diaminopimelat 100.0 1.4E-52 4.9E-57 420.0 33.6 368 50-440 6-389 (393)
8 3isz_A Succinyl-diaminopimelat 100.0 2.1E-52 7.1E-57 416.4 33.2 358 50-426 3-376 (377)
9 3rza_A Tripeptidase; phosphory 100.0 4.2E-52 1.4E-56 417.0 32.6 360 37-427 13-394 (396)
10 3dlj_A Beta-Ala-His dipeptidas 100.0 9.2E-52 3.1E-56 424.9 35.5 378 33-426 10-483 (485)
11 3gb0_A Peptidase T; NP_980509. 100.0 1E-50 3.4E-55 403.9 31.8 345 50-424 6-371 (373)
12 3tx8_A Succinyl-diaminopimelat 100.0 2.7E-51 9.2E-56 407.4 27.3 343 50-422 13-368 (369)
13 3pfe_A Succinyl-diaminopimelat 100.0 4.6E-50 1.6E-54 410.7 30.6 374 37-427 6-471 (472)
14 2zog_A Cytosolic non-specific 100.0 1.1E-49 3.7E-54 409.2 32.4 373 37-427 9-477 (479)
15 2f7v_A Aectylcitrulline deacet 100.0 1E-49 3.4E-54 396.0 28.9 333 50-422 9-366 (369)
16 2pok_A Peptidase, M20/M25/M40 100.0 6.8E-50 2.3E-54 410.8 28.5 372 36-424 31-480 (481)
17 3ct9_A Acetylornithine deacety 100.0 5.2E-50 1.8E-54 396.0 23.7 331 50-425 11-355 (356)
18 3khx_A Putative dipeptidase sa 100.0 6.3E-49 2.1E-53 403.9 28.2 362 36-427 22-491 (492)
19 2rb7_A Peptidase, M20/M25/M40 100.0 5E-49 1.7E-53 390.1 24.6 336 50-427 6-361 (364)
20 3ife_A Peptidase T; metallopep 100.0 6.5E-48 2.2E-52 390.9 31.3 346 50-426 27-432 (434)
21 1z2l_A Allantoate amidohydrola 100.0 2.7E-46 9.3E-51 378.0 32.5 346 50-427 9-412 (423)
22 1fno_A Peptidase T; metallo pe 100.0 1.6E-46 5.5E-51 379.0 29.7 346 50-427 2-407 (417)
23 3n5f_A L-carbamoylase, N-carba 100.0 2.2E-45 7.7E-50 369.5 34.8 341 50-426 5-407 (408)
24 2v8h_A Beta-alanine synthase; 100.0 1.3E-46 4.3E-51 385.3 25.9 355 50-438 32-459 (474)
25 2qyv_A XAA-His dipeptidase; YP 100.0 4.3E-45 1.5E-49 375.6 33.0 346 50-425 11-485 (487)
26 3mru_A Aminoacyl-histidine dip 100.0 9.9E-45 3.4E-49 372.3 30.6 344 50-425 14-487 (490)
27 1lfw_A PEPV; hydrolase, dipept 100.0 2.2E-44 7.6E-49 368.9 32.0 358 39-427 5-467 (470)
28 3t68_A Succinyl-diaminopimelat 100.0 1.4E-33 4.7E-38 267.4 19.6 248 50-426 6-268 (268)
29 4h2k_A Succinyl-diaminopimelat 100.0 3.9E-32 1.3E-36 257.5 21.8 249 50-426 6-268 (269)
30 1q7l_A Aminoacylase-1; catalys 99.9 5E-26 1.7E-30 205.5 13.6 170 50-224 10-198 (198)
31 2fvg_A Endoglucanase; TM1049, 99.9 9E-26 3.1E-30 221.0 13.9 248 55-426 3-335 (340)
32 1vhe_A Aminopeptidase/glucanas 99.9 2.9E-23 9.8E-28 205.7 19.6 256 50-427 7-355 (373)
33 2wzn_A TET3, 354AA long hypoth 99.9 2.4E-27 8E-32 230.7 -10.8 329 53-425 12-348 (354)
34 2wyr_A Cobalt-activated peptid 99.9 9.7E-23 3.3E-27 198.8 20.1 239 52-423 4-331 (332)
35 1y0y_A FRV operon protein FRVX 99.9 1.7E-21 5.9E-26 191.5 20.8 247 52-426 8-350 (353)
36 2gre_A Deblocking aminopeptida 99.9 1.7E-21 6E-26 191.2 18.7 240 50-423 6-344 (349)
37 1vho_A Endoglucanase; structur 99.9 4.9E-21 1.7E-25 187.9 18.1 248 50-427 5-337 (346)
38 3cpx_A Aminopeptidase, M42 fam 99.8 8.6E-21 2.9E-25 183.9 11.6 237 49-423 16-320 (321)
39 1ylo_A Hypothetical protein SF 99.8 2.4E-19 8.3E-24 175.9 21.8 248 54-425 7-337 (348)
40 1tkj_A Aminopeptidase, SGAP; d 99.8 6.3E-18 2.2E-22 160.9 21.4 120 50-186 7-145 (284)
41 1rtq_A Bacterial leucyl aminop 99.8 1.2E-16 3.9E-21 153.4 23.6 127 50-185 20-164 (299)
42 3kl9_A PEPA, glutamyl aminopep 99.7 1.8E-15 6.1E-20 147.7 22.2 246 51-424 4-344 (355)
43 2vpu_A TET3, 354AA long hypoth 99.6 4.8E-14 1.7E-18 137.4 21.0 243 52-424 11-347 (354)
44 3tc8_A Leucine aminopeptidase; 99.6 2.1E-14 7.2E-19 137.7 17.5 131 50-186 25-186 (309)
45 3gux_A Putative Zn-dependent e 99.6 3.6E-14 1.2E-18 136.1 16.0 131 50-186 27-189 (314)
46 3isx_A Endoglucanase; TM1050, 99.5 4.6E-13 1.6E-17 129.6 18.5 243 51-421 12-341 (343)
47 2afw_A Glutaminyl-peptide cycl 99.5 1E-13 3.6E-18 134.4 12.5 126 50-185 31-190 (329)
48 4fuu_A Leucine aminopeptidase; 99.2 2.7E-10 9.1E-15 109.4 16.5 131 50-186 25-187 (309)
49 3pb6_X Glutaminyl-peptide cycl 99.2 6.6E-11 2.3E-15 114.0 11.0 125 50-185 39-194 (330)
50 4fai_A CG5976, isoform B; alph 99.1 9.2E-10 3.2E-14 106.5 16.0 134 50-197 38-203 (330)
51 4f9u_A CG32412; alpha/beta hyd 99.1 6.9E-10 2.4E-14 106.7 13.8 123 50-185 11-163 (312)
52 1q7l_B Aminoacylase-1; catalys 99.1 1.4E-10 4.8E-15 89.6 6.1 77 341-427 2-81 (88)
53 3iib_A Peptidase M28; YP_92679 98.9 1.2E-08 4.3E-13 102.6 16.1 100 70-186 203-317 (444)
54 2ek8_A Aminopeptidase; metallo 98.6 1.2E-07 4.2E-12 94.8 10.8 96 71-185 172-285 (421)
55 3kas_A Transferrin receptor pr 97.9 2.7E-05 9.2E-10 81.2 10.3 78 93-186 266-350 (640)
56 3fed_A Glutamate carboxypeptid 97.9 1.8E-05 6.3E-10 83.3 8.8 78 93-186 312-395 (707)
57 3vat_A Dnpep, aspartyl aminope 93.3 0.14 4.6E-06 51.4 6.9 80 338-426 404-488 (496)
58 2ijz_A Probable M18-family ami 92.6 0.065 2.2E-06 53.0 3.5 76 338-422 343-423 (428)
59 2glf_A Probable M18-family ami 92.1 0.22 7.5E-06 49.4 6.5 77 338-423 368-449 (450)
60 2hc9_A Leucine aminopeptidase 91.3 2.6 8.7E-05 41.9 13.0 111 50-174 167-307 (491)
61 1y7e_A Probable M18-family ami 91.1 0.089 3E-06 52.5 2.4 76 337-421 376-456 (458)
62 4eme_A M18 aspartyl aminopepti 89.7 0.49 1.7E-05 48.0 6.5 81 338-426 472-562 (571)
63 3k9t_A Putative peptidase; str 88.5 3.2 0.00011 40.3 11.0 72 93-186 165-238 (435)
64 3h8g_F Cytosol aminopeptidase; 88.4 3.8 0.00013 40.8 11.7 112 49-174 179-322 (497)
65 1gyt_A Cytosol aminopeptidase; 87.8 4.5 0.00015 40.5 11.9 112 49-174 180-325 (503)
66 3ij3_A Cytosol aminopeptidase; 87.5 2.9 0.0001 41.2 10.1 111 50-174 167-305 (482)
67 3jru_B Probable cytosol aminop 86.4 6.2 0.00021 39.2 11.8 113 50-174 176-317 (490)
68 3pei_A Cytosol aminopeptidase; 86.2 5.2 0.00018 39.7 11.2 111 50-174 164-306 (486)
69 1lam_A Leucine aminopeptidase; 86.1 5.4 0.00019 39.6 11.3 111 50-174 161-305 (484)
70 4efd_A Aminopeptidase; structu 85.1 6.6 0.00023 39.0 11.2 111 50-174 204-345 (522)
71 2glj_A Probable M18-family ami 85.1 0.39 1.3E-05 47.9 2.5 75 338-421 380-459 (461)
72 3kzw_A Cytosol aminopeptidase; 82.3 14 0.00048 36.8 12.3 111 50-174 197-338 (515)
73 3kr4_A M17 leucyl aminopeptida 80.6 15 0.0005 36.7 11.7 114 48-174 203-349 (528)
74 2glf_A Probable M18-family ami 79.3 3.4 0.00012 40.9 6.8 54 64-117 28-96 (450)
75 1y7e_A Probable M18-family ami 77.8 1.3 4.4E-05 44.0 3.3 61 56-117 22-99 (458)
76 2ijz_A Probable M18-family ami 77.7 0.53 1.8E-05 46.4 0.5 61 57-117 6-85 (428)
77 2jvf_A De novo protein M7; tet 68.2 25 0.00084 24.6 6.9 64 285-359 15-81 (96)
78 3fed_A Glutamate carboxypeptid 67.9 8.4 0.00029 40.4 6.7 53 33-89 12-67 (707)
79 4f9u_A CG32412; alpha/beta hyd 65.9 9.5 0.00032 35.5 6.2 60 366-431 241-304 (312)
80 2ek8_A Aminopeptidase; metallo 61.0 20 0.00069 34.9 7.7 72 347-428 328-403 (421)
81 2glj_A Probable M18-family ami 59.7 2.2 7.6E-05 42.4 0.5 48 69-117 37-105 (461)
82 3mru_A Aminoacyl-histidine dip 52.2 20 0.00069 35.6 6.2 48 266-319 347-394 (490)
83 4fai_A CG5976, isoform B; alph 49.7 17 0.00059 34.1 4.9 57 367-429 267-327 (330)
84 3tc8_A Leucine aminopeptidase; 47.4 48 0.0016 30.7 7.5 80 342-423 222-308 (309)
85 3pb6_X Glutaminyl-peptide cycl 44.8 26 0.00088 33.0 5.2 56 365-426 270-329 (330)
86 3iib_A Peptidase M28; YP_92679 37.6 24 0.00083 34.6 4.0 63 363-429 369-435 (444)
87 3or1_C Sulfite reductase GAMA; 33.7 35 0.0012 26.2 3.4 38 50-87 27-64 (105)
88 2afw_A Glutaminyl-peptide cycl 32.9 44 0.0015 31.2 4.8 53 368-426 272-328 (329)
89 3kas_A Transferrin receptor pr 31.1 17 0.00057 37.7 1.6 50 34-87 6-60 (640)
90 4fuu_A Leucine aminopeptidase; 28.8 1.3E+02 0.0044 27.6 7.2 79 341-422 222-306 (309)
91 1ji8_A Dissimilatory siroheme- 26.8 30 0.001 26.8 2.0 37 50-86 32-69 (111)
No 1
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=100.00 E-value=3.5e-62 Score=493.41 Aligned_cols=392 Identities=66% Similarity=1.099 Sum_probs=320.8
Q ss_pred cchHHHHhhcCchhHHHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeecccCceEEEEECCCCCcEEEEEEec
Q 013442 35 IPVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADM 114 (443)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~~~~~I~~~~H~ 114 (443)
..+++.+++++++.++++++++++|++|||+|++|.++++||.++|+++|++++....++|+++++++++.|+|+|+|||
T Consensus 13 ~~~~i~~~~~~~~~~~~~i~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~l~a~~~~~~~~~i~l~aH~ 92 (418)
T 1xmb_A 13 IQTKLLEFAKSPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVAITGVIGYIGTGEPPFVALRADM 92 (418)
T ss_dssp ---CHHHHHHSHHHHHHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHHTCCEEEEETTTEEEEEEESSSSCEEEEEEEC
T ss_pred HHHHHHHHHHhhhcHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHcCCeeEeccCCcEEEEEEcCCCCCEEEEEecc
Confidence 45567777776433378999999999999999999999999999999999998875457899999975422899999999
Q ss_pred ccccCcccCCCccccCCCCeeecCcchHHHHHHHHHHHHHHcccccCCceEEEEEeccCCccchHHHHHHcCCCCcccee
Q 013442 115 DALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAI 194 (443)
Q Consensus 115 DtVp~~~~~~w~~~~~~~g~l~GrG~kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEEg~~G~~~~~~~g~~~~~d~~ 194 (443)
||||+++...|+|..+.+|++||||+|++++++|+|+++|++.+..++++|.|+|+++||++.|++++++++.++++|++
T Consensus 93 D~vp~~~~~~~pf~~~~~g~~~g~G~d~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EEg~~G~~~~~~~g~~~~~d~~ 172 (418)
T 1xmb_A 93 DALPIQEGVEWEHKSKIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAI 172 (418)
T ss_dssp CCBSCCCCCCSTTCCSSTTCBCCSSHHHHHHHHHHHHHHHHHTGGGCSSEEEEEEECCTTTTCHHHHHHHTTTTTTEEEE
T ss_pred cccCCCCCCCCCcccCCCCceEeCCchHHHHHHHHHHHHHHhccccCCceEEEEEeccccccccHHHHHHcCCcCCCCEE
Confidence 99999987788998878999999999999999999999999988789999999999999977899999999877778999
Q ss_pred eEecCCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHHhhccccCCCCCceEEEEEE
Q 013442 195 FGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKF 274 (443)
Q Consensus 195 i~~~~~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i 274 (443)
+++|.++++|.|.+....+.+++|..+++|+++|+++|||.|+.|+||+..+++++.+|+.+..+..++....+++++.|
T Consensus 173 i~~~~~~~~~~g~~~~~~~~~~~g~~~~~i~v~G~~~Has~P~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~t~~vg~i 252 (418)
T 1xmb_A 173 FGIHLSARIPFGKAASRAGSFLAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKVVTVSKV 252 (418)
T ss_dssp EEEEEEEEEETTCEEECSEEEECEEEEEEEEEEEC---------CCHHHHHHHHHHHHHHTTCBCCSSGGGCEEEEEEEE
T ss_pred EEEecCCCCCCceeEeeeccccccceeEEEEEEecCcccCCCccCCCHHHHHHHHHHHHHHHHhcccCCCCCcEEEEEEE
Confidence 99887766778876666677788999999999999999999999999999999999999887544444445679999999
Q ss_pred EcCCcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCC----CCcccCCHHHHHHHHHHH
Q 013442 275 EGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSF----YPVTVNNKNLHEHFQKVA 350 (443)
Q Consensus 275 ~gG~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~----~~~~~~d~~~~~~~~~~~ 350 (443)
+||.+.|+||++|++.+|+|++| +.+++.++|+++++..+..+++++++++ ... +|++.+|+++++.+++++
T Consensus 253 ~gG~~~NvIP~~a~~~~diR~~~--~~~~i~~~i~~~~~~~a~~~g~~~~~~~--~~~~~~p~~~~~~d~~l~~~~~~~~ 328 (418)
T 1xmb_A 253 NGGNAFNVIPDSITIGGTLRAFT--GFTQLQQRVKEVITKQAAVHRCNASVNL--TPNGREPMPPTVNNKDLYKQFKKVV 328 (418)
T ss_dssp C--------CCEEEEEEEEEESS--CHHHHHHHHHHHHHHHHHHTTEEEEEES--SGGGCCCBCCEEECHHHHHHHHHHH
T ss_pred EecCcCCcCCCeEEEEEEEccCc--HHHHHHHHHHHHHHHHHHHhCCeEEEEE--ccCCcccCCCccCCHHHHHHHHHHH
Confidence 99999999999999999999999 8999999999999988877888888876 444 777888999999999999
Q ss_pred HHhcCCcccccCCCCCCCchHHHHHhhcCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhhcCC
Q 013442 351 ADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLLENQP 430 (443)
Q Consensus 351 ~~~~g~~~~~~~~~~~g~tDa~~~~~~ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~~~~~~ 430 (443)
++++|.+++......+|++|+++|.+.+|++++++|+.+++ |....+|+|||+++++++.+++++|+.++.+++..++.
T Consensus 329 ~~~~g~~~~~~~~~~~g~tD~~~~~~~~P~~~~~~G~~~~~-~~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~~~~~ 407 (418)
T 1xmb_A 329 RDLLGQEAFVEAAPVMGSEDFSYFAETIPGHFSLLGMQDET-NGYASSHSPLYRINEDVLPYGAAIHASMAVQYLKEKAS 407 (418)
T ss_dssp HHHHCGGGEEECCCBCCCCTHHHHHTTSCEEEEEEEEECTT-CCSCCTTCTTCCCCGGGHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHhcCCcceeccCCCCCcchHHHHHHHCCEEEEEEeCCCCC-CCCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99778865322356789999999988899887777865421 23457999999999999999999999999999986655
Q ss_pred C
Q 013442 431 K 431 (443)
Q Consensus 431 ~ 431 (443)
+
T Consensus 408 ~ 408 (418)
T 1xmb_A 408 K 408 (418)
T ss_dssp -
T ss_pred C
Confidence 4
No 2
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=1.3e-59 Score=472.60 Aligned_cols=368 Identities=39% Similarity=0.636 Sum_probs=310.0
Q ss_pred HHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeec-ccCceEEEEECCC-CCcEEEEEEecccccCcccCCCcc
Q 013442 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFP-VAVTGVVGYIGTG-QPPFVALRADMDALAMEESVEWEH 127 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~-~~~~~via~~~~~-~~~~I~~~~H~DtVp~~~~~~w~~ 127 (443)
+++++++++|++|||+|++|.++++||.++|+++|++++.. .+++|++++++++ ++|+|+|+||+||||+++...+||
T Consensus 32 ~~~i~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~nv~a~~~g~~~~~~i~l~~H~D~vp~~~~~~~Pf 111 (404)
T 1ysj_A 32 TRLINMRRDLHEHPELSFQEVETTKKIRRWLEEEQIEILDVPQLKTGVIAEIKGREDGPVIAIRADIDALPIQEQTNLPF 111 (404)
T ss_dssp HHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHTTCEECCCTTCSSCEEEEEECSSCCCEEEEEEECCCBSCCCCCCCTT
T ss_pred HHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHcCCceEEeccCCceEEEEEeCCCCCCEEEEEEecccccCCCCCCCCc
Confidence 78999999999999999999999999999999999998653 3467999999654 468999999999999987555567
Q ss_pred ccCCCCeeecCcchHHHHHHHHHHHHHHcccccCCceEEEEEeccCCccchHHHHHHcCCCCccceeeEecCCCCCCCce
Q 013442 128 KSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIFGLHVSSLFPVGT 207 (443)
Q Consensus 128 ~~~~~g~l~GrG~kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEEg~~G~~~~~~~g~~~~~d~~i~~~~~~~~~~g~ 207 (443)
....+|++||||+|++++++|+|+++|++.+..++++|.|+|++|||++.|++++++++.++++|+++++|.+++.+.|.
T Consensus 112 ~~~~~g~l~g~G~kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~~~G~~~~~~~g~~~~~d~~i~~h~ep~~~~g~ 191 (404)
T 1ysj_A 112 ASKVDGTMHACGHDFHTASIIGTAMLLNQRRAELKGTVRFIFQPAEEIAAGARKVLEAGVLNGVSAIFGMHNKPDLPVGT 191 (404)
T ss_dssp CCSSTTCBCTTSHHHHHHHHHHHHHHHHTCGGGCSSEEEEEEESCTTTTCHHHHHHHTTTTTTEEEEEEEEEETTSCTTE
T ss_pred ccCCCCceEcCcChHHHHHHHHHHHHHHhccccCCceEEEEEecccccchhHHHHHhcCCCcCCCEEEEEecCCCCCCce
Confidence 76678999999999999999999999999877899999999999999878999999988877889999988777667777
Q ss_pred EEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEcCCcCccccCcE
Q 013442 208 VASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSV 287 (443)
Q Consensus 208 ~~~~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gG~~~n~vP~~a 287 (443)
+....|..++|..+++|+++|+++||+.|+.|.||+..+++++.+|+++..+..++....+++++.|+||.+.|+||++|
T Consensus 192 v~~~~g~~~~g~~~~~i~v~G~~~Has~P~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~vg~i~gG~~~NvIP~~a 271 (404)
T 1ysj_A 192 IGVKEGPLMASVDRFEIVIKGKGGHASIPNNSIDPIAAAGQIISGLQSVVSRNISSLQNAVVSITRVQAGTSWNVIPDQA 271 (404)
T ss_dssp EEECSEEEECCEEEEEEEEECC--------CCCCHHHHHHHHHHHHC-----------CCEEEEEEEEECSCSSSCCSEE
T ss_pred EEeccChhhcccceEEEEEEccCccccCcccCCCHHHHHHHHHHHHHHHHhhhcCCCCCcEEEEEEEEcCCCCceecCce
Confidence 66665555678999999999999999999999999999999999998775444455567799999999999999999999
Q ss_pred EEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcccCCHHHHHHHHHHHHHh-cCCcccccCCCCC
Q 013442 288 TIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADM-LGVQNIKENRPLM 366 (443)
Q Consensus 288 ~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~-~g~~~~~~~~~~~ 366 (443)
++.+|+|++|.++.+++.++|++.++..+...++++++++ ...+|++.+|+++++.++++++++ +|.++. . ..+
T Consensus 272 ~~~~diR~~~~~~~~~i~~~i~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~g~g~~~~--~-~~~ 346 (404)
T 1ysj_A 272 EMEGTVRTFQKEARQAVPEHMRRVAEGIAAGYGAQAEFKW--FPYLPSVQNDGTFLNAASEAAARLGYQTVHA--E-QSP 346 (404)
T ss_dssp EEEEEEECSSHHHHHHHHHHHHHHHHHHHHHTTCEEEEEE--EEEECCEEECGGGHHHHHHHHHHTTCEEEEC--C-CBS
T ss_pred EEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCEEEEEE--ecCCCCccCCHHHHHHHHHHHHHhcCCcccc--c-cCC
Confidence 9999999999999999999999999988877898888876 556778888888999999999998 776553 2 678
Q ss_pred CCchHHHHHhhcCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhh
Q 013442 367 GTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLLE 427 (443)
Q Consensus 367 g~tDa~~~~~~ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~~~ 427 (443)
|++|+++|.+.+|++++++| ||+...+|+|||+++++++.+++++|+.++.++++.
T Consensus 347 g~tD~~~~~~~~p~~~~~~G-----~~~~~~~H~~~E~v~~~~l~~~~~~~~~~~~~~~~~ 402 (404)
T 1ysj_A 347 GGEDFALYQEKIPGFFVWMG-----TNGTEEWHHPAFTLDEEALTVASQYFAELAVIVLET 402 (404)
T ss_dssp SCCTHHHHHTTSCEEEEEEE-----CCCSSCTTCTTCCCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHCCeEEEEEc-----CCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhh
Confidence 89999999888998877788 444457999999999999999999999999999863
No 3
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=100.00 E-value=4e-60 Score=481.63 Aligned_cols=381 Identities=25% Similarity=0.396 Sum_probs=305.0
Q ss_pred hHHHHhhcCchhHHHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeecc-------------------------
Q 013442 37 VKFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPV------------------------- 91 (443)
Q Consensus 37 ~~~~~~~~~~~~~~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~~------------------------- 91 (443)
.++.+++++.+ +++++++++|+++||++++|.++++||.++|+++||+++...
T Consensus 3 ~~~~~~~~~~~--~~~~~~~~~lh~~Pe~~~~E~~t~~~i~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (445)
T 3io1_A 3 LQLDEYLRQLA--PSMTQWRRDFHLHAESGWLEFRTASKVADILDGLGYQLALGRDVIDADSRMGLPDEETLARAFERAR 80 (445)
T ss_dssp CCHHHHHHTTH--HHHHHHHHHHHHTCCCTTCCHHHHHHHHHHHHHTTCEEEEGGGTSCSTTCCSCCCHHHHHHHHHHHH
T ss_pred chHHHHHHHHH--HHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHCCCeEEecccccccccccccccchhhhhhhhhhc
Confidence 46777888877 999999999999999999999999999999999999987631
Q ss_pred --------------cCceEEEEECCC-CCcEEEEEEecccccCcccCCCcc-------ccCCCCeeecCcchHHHHHHHH
Q 013442 92 --------------AVTGVVGYIGTG-QPPFVALRADMDALAMEESVEWEH-------KSKVPGKMHACGHDAHVAMLLG 149 (443)
Q Consensus 92 --------------~~~~via~~~~~-~~~~I~~~~H~DtVp~~~~~~w~~-------~~~~~g~l~GrG~kg~~a~~l~ 149 (443)
+++|++|+++++ ++|+|+|+|||||||+++..+|++ .++.+|++||||||++++++|+
T Consensus 81 ~~g~~~~~~~~~~~~~~~vva~~~~~~~g~~i~l~ah~Davp~~e~~~~~~~Pf~~~~~s~~~G~~h~cGhd~~~a~~l~ 160 (445)
T 3io1_A 81 EQGAPERWLPAFEGGFAGVVATLDTGRPGPTLAFRVDMDALDLNEQHDDSHRPHRDHFASCNAGMMHACGHDGHTAIGLG 160 (445)
T ss_dssp TTTCCTTTGGGGTTTCCCEEEEEECSSCCCEEEEEEECCCCCC-------------------------CTTCTHHHHHHH
T ss_pred cccccccccccccCCCCEEEEEEeCCCCCCEEEEEEecCCcCCCCCCCCCcCccccccccCCCCceEecCchHHHHHHHH
Confidence 568999999765 579999999999999999889963 3567899999999999999999
Q ss_pred HHHHHHcccccCCceEEEEEeccCCccchHHHHHHcCCCCccceeeEecCCCCCCCceEEeecCcccccceEEEEEEEec
Q 013442 150 AAKMLQVFRHEIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGK 229 (443)
Q Consensus 150 a~~~l~~~~~~l~~~i~~i~~~dEEg~~G~~~~~~~g~~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~ 229 (443)
|+++|++.+..++++|+|+|++|||++.|++.|+++|.++++|++++.|+.+..|.|.+.+..+.. .+..+++|+++|+
T Consensus 161 aa~~L~~~~~~~~g~v~l~f~p~EE~~~Ga~~~i~~g~~~~~d~~~~~h~~~~~~~g~i~~~~~g~-~a~~~~~i~v~Gk 239 (445)
T 3io1_A 161 LAHVLKQYAAQLNGVIKLIFQPAEEGTRGARAMVAAGVVDDVDYFTAIHIGTGVPAGTVVCGGDNF-MATTKFDVQFSGV 239 (445)
T ss_dssp HHHHHHHTGGGCCSEEEEEEESCTTTTCHHHHHHHTTTTTTCSEEEEEEEEEEEETTBEESCCCCB-CEEEEEEEEEECC
T ss_pred HHHHHHhCcCcCCceEEEEEeccccccchHHHHHHcCCccccceeEEEeccCCCCCCeEEEecCCe-eEEEEEEEEEEee
Confidence 999999988789999999999999987899999999999899999999987666778776543321 1346999999999
Q ss_pred CCCC-CCCCCCCcHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEcCCcCccccCcEEEEEEEecCChHHHHHHHHHH
Q 013442 230 GGHA-AIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRI 308 (443)
Q Consensus 230 ~aHs-s~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gG~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i 308 (443)
++|+ ++|+.|+||+..+++++.+|+++. +.. ....+++++.|+||.+.|+||++|++.+++|+.+.++.+++.++|
T Consensus 240 ~~HaGs~P~~g~nAi~~aa~~i~~l~~l~-~~~--~~~~~~~vg~i~gG~~~NvIP~~a~~~~~iR~~~~~~~~~i~~~i 316 (445)
T 3io1_A 240 AAHAGGKPEDGRNALLAAAQAALGLHAIP-PHS--AGASRVNVGVMQAGTGRNVVPSSALLKVETRGESEAINQYVFERA 316 (445)
T ss_dssp CSSTTCCGGGCCCHHHHHHHHHHHHHTCC-CBT--TBCEEEEEEEEEECSCTTSCCCEEEEEEEEEESSHHHHHHHHHHH
T ss_pred cCCCCCCCcCCcCHHHHHHHHHHHHHHHH-hhc--CCCeEEEEEEEecCCCCceeCCeEEEEEEEecCCHHHHHHHHHHH
Confidence 9998 699999999999999999999873 222 235789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCeEEEEeeccCCCCcccCCHHHHHHHHHHHHHhcCCccccc-CCCCCCCchHHHHHhhcC-----cEE
Q 013442 309 EEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKE-NRPLMGTEDFSFFAEAIP-----GYF 382 (443)
Q Consensus 309 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~-~~~~~g~tDa~~~~~~ip-----~~~ 382 (443)
+++++..+..+++++++++ ...++++.+|+++++.+++++++++|.+.+.. ....+|++|+++|.+.+| ..+
T Consensus 317 ~~~~~~~a~~~g~~~~i~~--~~~~~~~~~d~~l~~~~~~a~~~~~g~~~v~~~~~~~~g~~D~~~~~~~~P~~gg~~~~ 394 (445)
T 3io1_A 317 QHVVAGAAAMYEARYELRM--MGAATASAPSPAWVDYLREQAARVPGVQQAVDRIAAPAGSEDATLMMARVQARGGLASY 394 (445)
T ss_dssp HHHHHHHHHHTTCEEEEEE--EEEECCCCCCHHHHHHHHHHHHHSTTCCBCBSSCCCCCBCCTHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHhCCeEEEEE--ecCCCCcCCCHHHHHHHHHHHHHhcCCccceecCCCCccHHHHHHHHHHhcccCCceEE
Confidence 9999998888899999987 56788888999999999999999877654322 223488999999998876 455
Q ss_pred EEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhhcCC
Q 013442 383 YYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLLENQP 430 (443)
Q Consensus 383 ~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~~~~~~ 430 (443)
+++|+ |....+|+|||+++++++..++++|+.++.+++.+++.
T Consensus 395 ~~~G~-----~~~~~~H~~~E~i~~~~l~~g~~~~~~~~~~~~~~~~~ 437 (445)
T 3io1_A 395 MIFGT-----ELSAGHHNEKFDFDESVMAVAVETLARVALNFPWQRGV 437 (445)
T ss_dssp EEEEE-----EC-----------CCCHHHHHHHHHHHHHHTCCSCC--
T ss_pred EEEeC-----CCCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHhhccCC
Confidence 67784 33456999999999999999999999999999876553
No 4
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=100.00 E-value=8.5e-55 Score=441.70 Aligned_cols=370 Identities=13% Similarity=0.116 Sum_probs=310.1
Q ss_pred cchHHHHhhcCchhHHHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeec---------------------ccC
Q 013442 35 IPVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFP---------------------VAV 93 (443)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~---------------------~~~ 93 (443)
..+++.+++++++ +++++++++|++|||+|++|.++++||.++|+++|++++.. +.+
T Consensus 13 ~~~~i~~~i~~~~--~~~~~~l~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (433)
T 3pfo_A 13 ITQSLRAAVDRNF--NDQVAFLQRMVQFRSVRGEEAPQQEWLAQQFADRGYKVDTFSLADVDIASHPKAAPMDTIDPAGS 90 (433)
T ss_dssp HHHHHHHHHHHHH--HHHHHHHHHHHTSCCBTTCCHHHHHHHHHHHHHTTCEEEEEETGGGTGGGSTTCCCCTTCCGGGC
T ss_pred HHHHHHHHHHhhH--HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHCCCceEEEecchhhhhccccccccccccCCCC
Confidence 4667888898887 99999999999999999999999999999999999998652 456
Q ss_pred ceEEEEECCC-CCcEEEEEEecccccCcccCCCccc----cCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceE
Q 013442 94 TGVVGYIGTG-QPPFVALRADMDALAMEESVEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTI 165 (443)
Q Consensus 94 ~~via~~~~~-~~~~I~~~~H~DtVp~~~~~~w~~~----~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i 165 (443)
+|++++++++ ++|+|+|+|||||||+++.+.|+.+ .+++|++||||+ |++++++|+|+++|++.+..++++|
T Consensus 91 ~~via~~~g~~~~~~v~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~~~a~~l~a~~~l~~~~~~~~~~v 170 (433)
T 3pfo_A 91 MQVVATADSDGKGRSLILQGHIDVVPEGPVDLWSDPPYEAKVRDGWMIGRGAQDMKGGVSAMIFALDAIRTAGYAPDARV 170 (433)
T ss_dssp EEEEEEECCCCCSCCEEEEEECCBCCCCCGGGCSSCTTTCCEETTEEECTTTTTTHHHHHHHHHHHHHHHHTTEEESSCE
T ss_pred cEEEEEEecCCCCCEEEEEcccCCcCCCCcccCCCCCCCcEEECCEEEecchhhhhHHHHHHHHHHHHHHHcCCCCCccE
Confidence 8999999754 5689999999999999988889643 467899999998 8999999999999999887899999
Q ss_pred EEEEeccCC-ccchHHHHHHcCCCCccceeeEecCCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHH
Q 013442 166 VLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIV 244 (443)
Q Consensus 166 ~~i~~~dEE-g~~G~~~~~~~g~~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~ 244 (443)
.|+|+++|| ++.|++.+++++. ++|++++.++.. ..+. .+++|..+++|+++|+++|+|.|+.|+||+.
T Consensus 171 ~~~~~~~EE~g~~G~~~~~~~~~--~~d~~i~~ep~~----~~i~----~~~~G~~~~~i~v~G~~~Ha~~p~~g~nAi~ 240 (433)
T 3pfo_A 171 HVQTVTEEESTGNGALSTLMRGY--RADACLIPEPTG----HTLT----RAQVGAVWFRLRVRGTPVHVAYSETGTSAIL 240 (433)
T ss_dssp EEEEESCTTTTCHHHHHHHHTTC--CCSEEEECCCCS----SCEE----EEECEEEEEEEEEECCCCBGGGGGGSCCHHH
T ss_pred EEEEEecCccCChhHHHHHhcCC--CCCEEEEeCCCC----CceE----EecceEEEEEEEEEcCCCccCCCCcCcCHHH
Confidence 999999999 6789999998765 678888755321 1232 3467999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccc-----cCC-----CCCceEEEEEEEcCCcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHH
Q 013442 245 AASNVIVSLQHLVSRE-----ADP-----LDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMK 314 (443)
Q Consensus 245 ~~~~~i~~l~~~~~~~-----~~~-----~~~~t~~v~~i~gG~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~ 314 (443)
.+++++.+|+++..+. .++ ..+.+++++.|+||.+.|+||++|++.+++|++|.++.+++.++|+++++.
T Consensus 241 ~~~~~i~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~vg~i~gG~~~NvIP~~a~~~~~iR~~~~~~~~~~~~~i~~~~~~ 320 (433)
T 3pfo_A 241 SAMHLIRAFEEYTKELNAQAVRDPWFGQVKNPIKFNVGIIKGGDWASSTAAWCELDCRLGLLTGDTPQEAMRGIEKCLAD 320 (433)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGCTTTTTSSSCSCEEEEEEEECSCTTBCCCEEEEEEEEEECTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhccccCccccccCCCceEEeeeEECCCCCcccCcEEEEEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 9999999998875422 122 235689999999999999999999999999999999999999999999998
Q ss_pred HHHhhC----CeEEEEeeccCCCCccc--CCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhh--cCcEEEEec
Q 013442 315 QASVQR----CNATVTFDDKSFYPVTV--NNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA--IPGYFYYLG 386 (443)
Q Consensus 315 ~~~~~~----~~~~v~~~~~~~~~~~~--~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~~~~~--ip~~~~~~G 386 (443)
.+..++ +++++++. ...+|++. .|+++++.+.+++++.+|.++. ...++|++|+++|.+. +|+++ +|
T Consensus 321 ~~~~~~~~~~~~~~v~~~-~~~~p~~~~~~d~~~~~~~~~a~~~~~G~~~~--~~~~~g~~D~~~~~~~~giP~v~--~G 395 (433)
T 3pfo_A 321 AQATDSFLSENPAELVWS-GFQADPAVCEPGGVAEDVLTAAHKAAFNAPLD--ARLSTAVNDTRYYSVDYGIPALC--YG 395 (433)
T ss_dssp HHTTCHHHHHSCCEEEEE-EEEECCEECCTTCHHHHHHHHHHHHHHSSCCC--EEEESSCCTHHHHHHTTCCCEEE--CC
T ss_pred HhhhCcccccCCeEEEEe-cccCCcccCCCCCHHHHHHHHHHHHHhCCCCc--eeeeeeeccHHHHHhhCCCCEEE--EC
Confidence 776432 44666652 13445543 4678999999999987798653 2357889999999874 99764 66
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhh
Q 013442 387 MNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLLE 427 (443)
Q Consensus 387 ~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~~~ 427 (443)
|| ...+|+|||+++++++.+++++|+.++.++|+.
T Consensus 396 -----p~-~~~~H~~~E~i~~~~l~~~~~~~~~~i~~~~~~ 430 (433)
T 3pfo_A 396 -----PY-GQGPHAFDERIDLESLRKTTLSIALFVAEWCGL 430 (433)
T ss_dssp -----CC-EECTTSTTCEEEHHHHHHHHHHHHHHHHHHHCE
T ss_pred -----CC-CccCCCCCceEEHHHHHHHHHHHHHHHHHHhcc
Confidence 34 256999999999999999999999999999864
No 5
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=100.00 E-value=1.6e-53 Score=426.46 Aligned_cols=359 Identities=23% Similarity=0.329 Sum_probs=310.4
Q ss_pred chHHHHhhcCchhHHHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeeccc--CceEEEEECCC-CCcEEEEEE
Q 013442 36 PVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVA--VTGVVGYIGTG-QPPFVALRA 112 (443)
Q Consensus 36 ~~~~~~~~~~~~~~~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~~~--~~~via~~~~~-~~~~I~~~~ 112 (443)
.+++.+++++++ +++++++++|++|||+|++|.++++||.++|+++||+++.... ++|++|+++++ ++|+|+|++
T Consensus 4 ~~~i~~~~~~~~--~~~~~~~~~l~~~pe~s~~E~~~~~~i~~~l~~~G~~v~~~~~g~~~~via~~~g~~~g~~i~l~a 81 (394)
T 3ram_A 4 KQQILDYIETNK--YSYIEISHRIHERPELGNEEIFASRTLIDRLKEHDFEIETEIAGHATGFIATYDSGLDGPAIGFLA 81 (394)
T ss_dssp HHHHHHHHHHTH--HHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHTTCEEEEEETTEEEEEEEEEECSSSSCEEEEEE
T ss_pred HHHHHHHHHHHH--HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHcCCeEEeCCCCCceEEEEEEeCCCCCCEEEEEE
Confidence 457788888877 9999999999999999999999999999999999999877432 57999999765 569999999
Q ss_pred ecccccCcccCCCccccCCCCeeecCcchHHHHHHHHHHHHHHcccccCCceEEEEEeccCCc--cchHH-HHHHcCCCC
Q 013442 113 DMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEG--GGGAK-KMLDAGALE 189 (443)
Q Consensus 113 H~DtVp~~~~~~w~~~~~~~g~l~GrG~kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEEg--~~G~~-~~~~~g~~~ 189 (443)
|||||| |++||||+|++.+++++|+++|++.+..++++|.|+|+++||+ ..|++ .+++.|.++
T Consensus 82 h~D~vp--------------g~~ha~G~d~~~a~~l~aa~~L~~~~~~~~g~v~~~f~~~EE~~~~~Ga~~~~~~~g~~~ 147 (394)
T 3ram_A 82 EYDALP--------------GLGHACGHNIIGTASVLGAIGLKQVIDQIGGKVVVLGCPAEEGGENGSAKASYVKAGVID 147 (394)
T ss_dssp CCCCCT--------------TTSSTTCHHHHHHHHHHHHHHHHTTHHHHCSEEEEEECCCTTCCTTCCHHHHHHHHTGGG
T ss_pred ecccCC--------------CcceECCccHHHHHHHHHHHHHHHhHhhCCceEEEEEECCccCCCCCchHHHHHHcCCcc
Confidence 999999 6789999999999999999999988778999999999999994 37999 999999888
Q ss_pred ccceeeEecCCCCCCCceEEeecCcccccceEEEEEEEecCCCCC-CCCCCCcHHHHHHHHHHHHHHhhccccCCCCCce
Q 013442 190 NVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAA-IPQHTIDPIVAASNVIVSLQHLVSREADPLDSQV 268 (443)
Q Consensus 190 ~~d~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss-~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t 268 (443)
++|++++.|+.++. ..+..++|..+++|+++|+++|+| .|+.|+||+..+++++..|+.+.... + ...+
T Consensus 148 ~~d~~~~~h~~~~~-------~~~~~~~g~~~~~i~v~Gk~~Ha~~~P~~g~nAi~~a~~~i~~l~~l~~~~--~-~~~~ 217 (394)
T 3ram_A 148 QIDIALMIHPGNET-------YKTIDTLAVDVLDVKFYGKSAHASENADEALNALDAMISYFNGVAQLRQHI--K-KDQR 217 (394)
T ss_dssp GCSEEECCEEESSB-------BCCCCBCEEEEEEEEEECBCCBHHHHGGGCBCHHHHHHHHHHHHHHHGGGS--C-TTCE
T ss_pred cCCEEEEECCcccc-------CCCccccceeEEEEEEEccccccCCCCcCCCCHHHHHHHHHHHHHHHHhhC--C-CCCe
Confidence 89999998875432 234456799999999999999999 99999999999999999999874322 1 2356
Q ss_pred EEEEEEEcCCcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcccCCHHHHHHHHH
Q 013442 269 LTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQK 348 (443)
Q Consensus 269 ~~v~~i~gG~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~ 348 (443)
++++.++||.+.|+||++|++.+++|+.+.++.+.+.++|+++++..+..+++++++++. ..++|++.+|+++++.+++
T Consensus 218 ~~~~~i~gG~~~NvIP~~a~~~~~iR~~~~~~~~~i~~~i~~~~~~~a~~~g~~~ei~~~-~~~~~~~~~d~~l~~~~~~ 296 (394)
T 3ram_A 218 VHGVILDGGKAANIIPDYTHARFYTRAMTRKELDILTEKVNQIARGAAIQTGCDYEFGPI-QNGVNEFIKTPKLDDLFAK 296 (394)
T ss_dssp EEEEEEEBCSCTTBCCSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHTCEEEEEES-SCCBCCCCCCHHHHHHHHH
T ss_pred eEEEEEECCCCCceeCCeEEEEEEEeeCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEe-cCCCCCccCCHHHHHHHHH
Confidence 788889999999999999999999999999999999999999999988888999988762 3578888899999999999
Q ss_pred HHHHhcCCcccccCCCCCCCchHHHHHhhcCcEEEEecCCCCCCCCCCCCCCCCCC-------CCCCchHHHHHHHHHHH
Q 013442 349 VAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFR-------VNEDALPYGAALHASLA 421 (443)
Q Consensus 349 ~~~~~~g~~~~~~~~~~~g~tDa~~~~~~ip~~~~~~G~~~~~pG~~~~~H~p~E~-------i~i~~l~~~~~~~a~~~ 421 (443)
+++++ | ..+.....++|++|+++|.+.+|++++++|... | ....|+| || ++.+++..++++++.++
T Consensus 297 a~~~~-G-~~~~~~~~~~g~~D~~~~~~~~P~~~~~~g~~~---~-~~~~H~~-ef~~~~~~~~~~~~l~~g~~~la~~~ 369 (394)
T 3ram_A 297 YAEEV-G-EAVIDDDFGYGSTDTGNVSHVVPTIHPHIKIGS---R-NLVGHTH-RFREAAASVHGDEALIKGAKIMALMG 369 (394)
T ss_dssp HHHHT-T-CCBCCSCCCCBCCTHHHHTTTSCBCCCEEECSC---T-TCCTTSH-HHHHHTTSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHh-C-cccccCCCCcccccHHHHHHHhchheEEeeecC---C-CCCCCCH-HHHhccCCCccHHHHHHHHHHHHHHH
Confidence 99885 8 443223468899999999977999887777653 2 1368999 66 48999999999999999
Q ss_pred HHHHhhc
Q 013442 422 TRYLLEN 428 (443)
Q Consensus 422 ~~l~~~~ 428 (443)
.+++.++
T Consensus 370 ~~~l~~~ 376 (394)
T 3ram_A 370 LELITNQ 376 (394)
T ss_dssp HHHHHCH
T ss_pred HHHhcCH
Confidence 9999754
No 6
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=2.5e-53 Score=425.57 Aligned_cols=368 Identities=18% Similarity=0.181 Sum_probs=305.9
Q ss_pred cccchHHHHhhcCchhHHHHHHHHHHHHhCCCCCccc---HHHHHHHHHHHHhCCCCeeecc-----cCceEEEEECCCC
Q 013442 33 TQIPVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQE---FETSKLIRAELDQMGIPYKFPV-----AVTGVVGYIGTGQ 104 (443)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~i~ll~~l~~ipS~s~~E---~~~~~~l~~~l~~~G~~~~~~~-----~~~~via~~~~~~ 104 (443)
+...+++.+++++++ +++++++++|++|||+|++| .++++||.++|+++|++++... .++|+++++++..
T Consensus 4 ~~~~~~~~~~~~~~~--~~~~~~l~~lv~i~s~s~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~v~a~~~g~~ 81 (393)
T 1cg2_A 4 QKRDNVLFQAATDEQ--PAVIKTLEKLVNIETGTGDAEGIAAAGNFLEAELKNLGFTVTRSKSAGLVVGDNIVGKIKGRG 81 (393)
T ss_dssp CCCCHHHHHHHHHHH--HHHHHHHHHHHTSCCBTTCHHHHHHHHHHHHHHHHHTTCEEEEEECSTTCCSEEEEEEEECSS
T ss_pred cchhhHHHHHHHhhH--HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEecCcCCCCCeEEEEECCCC
Confidence 346778899998877 99999999999999999876 6899999999999999987643 3569999997544
Q ss_pred CcEEEEEEecccccCcc-cCCCccccCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchH
Q 013442 105 PPFVALRADMDALAMEE-SVEWEHKSKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGA 179 (443)
Q Consensus 105 ~~~I~~~~H~DtVp~~~-~~~w~~~~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~ 179 (443)
+|+|+|++||||||+.. ...|||. +++|++||||+ |++++++|+|+++|++.+..++++|.|+|+++|| ++.|+
T Consensus 82 ~~~i~l~aH~D~vp~~~~~~~~Pf~-~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~G~ 160 (393)
T 1cg2_A 82 GKNLLLMSHMDTVYLKGILAKAPFR-VEGDKAYGPGIADDKGGNAVILHTLKLLKEYGVRDYGTITVLFNTDEEKGSFGS 160 (393)
T ss_dssp CCCEEEEEECCBSCCTTHHHHSCCE-EETTEEECTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEEESCGGGTTTTT
T ss_pred CceEEEEEecCcCCCCCccccCCee-eeCCEEEcCCcccchHHHHHHHHHHHHHHhcCCCCCCCEEEEEEcccccCCccH
Confidence 58999999999998743 3457887 57899999996 7999999999999999887788899999999999 66899
Q ss_pred HHHHHcCCCCccceeeEecCCCCCCCceEEeecCcccccceEEEEEEEecCCCCC-CCCCCCcHHHHHHHHHHHHHHhhc
Q 013442 180 KKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAA-IPQHTIDPIVAASNVIVSLQHLVS 258 (443)
Q Consensus 180 ~~~~~~g~~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss-~p~~g~NAi~~~~~~i~~l~~~~~ 258 (443)
+++++++. .++|++++.++.. .+.+.+. .+++|..+++|+++|+++||| .|+.|.||+..+++++.+|+.+..
T Consensus 161 ~~~~~~~~-~~~d~~i~~e~~~-~~~~~i~----~~~~G~~~~~i~v~G~~~Hag~~p~~g~nAi~~~~~~i~~l~~~~~ 234 (393)
T 1cg2_A 161 RDLIQEEA-KLADYVLSFEPTS-AGDEKLS----LGTSGIAYVQVNITGKASHAGAAPELGVNALVEASDLVLRTMNIDD 234 (393)
T ss_dssp HHHHHHHH-HHCSEEEECCCEE-TTSCEEE----SEECEEEEEEEEEECBCEETTSCGGGSBCHHHHHHHHHHHHGGGCB
T ss_pred HHHHHHHh-hcCCEEEEeCCCC-CCCCcEE----EeeeeeEEEEEEEEeeecccCCCcccCcCHHHHHHHHHHHHHhhhC
Confidence 99987643 3578888776431 0234432 235799999999999999997 799999999999999999987642
Q ss_pred cccCCCCCceEEEEEEEcCCcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcccC
Q 013442 259 READPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVN 338 (443)
Q Consensus 259 ~~~~~~~~~t~~v~~i~gG~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 338 (443)
+....+++++.|+||.+.|+||++|++.+|+|++|.++.+++.++|+++++. +...++++++++ ...+|++..
T Consensus 235 ----~~~~~~~~v~~i~gG~~~NvIP~~a~~~~~iR~~~~~~~~~i~~~i~~~~~~-~~~~~~~~~~~~--~~~~~~~~~ 307 (393)
T 1cg2_A 235 ----KAKNLRFNWTIAKAGNVSNIIPASATLNADVRYARNEDFDAAMKTLEERAQQ-KKLPEADVKVIV--TRGRPAFNA 307 (393)
T ss_dssp ----TTTTEEEEEEEEEECSSTTEECSEEEEEEEEEESSHHHHHHHHHHHHHHHTS-CSSTTCEEEEEE--EECSCCEEC
T ss_pred ----cccCceEEEEEEeCCCCCCEECcccEEEEEEeeCChhhHHHHHHHHHHHHhc-ccCCCcEEEEEe--ccccCCccC
Confidence 2345799999999999999999999999999999999999999999999876 334577788876 456777654
Q ss_pred C---HHHHHHHHHHHHHhcCCcccccCCC-CCCCchHHHHHhh-cCcEEEEecCCCCCCCCCCCCCC-CCCCCCCCchHH
Q 013442 339 N---KNLHEHFQKVAADMLGVQNIKENRP-LMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHS-PYFRVNEDALPY 412 (443)
Q Consensus 339 d---~~~~~~~~~~~~~~~g~~~~~~~~~-~~g~tDa~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~-p~E~i~i~~l~~ 412 (443)
+ +++++.++++++++ |.++. ... ++|++|+++|... +|+++ ++|+.. ..+|+ |||+++++++.+
T Consensus 308 ~~~~~~l~~~~~~~~~~~-g~~~~--~~~~~~g~tD~~~~~~~giP~~~-~~G~~~------~~~H~~~~E~i~~~~l~~ 377 (393)
T 1cg2_A 308 GEGGKKLVDKAVAYYKEA-GGTLG--VEERTGGGTDAAYAALSGKPVIE-SLGLPG------FGYHSDKAEYVDISAIPR 377 (393)
T ss_dssp HHHHHHHHHHHHHHHHHT-TCCCE--EESCBSCCCTHHHHGGGSCCEEC-CCSCEE------ECTTSSSCCEEEGGGHHH
T ss_pred CcchHHHHHHHHHHHHHh-CCCCc--cccCCCcccHHHHHHhCCCCEEE-eCCCCC------CCccCCCcceEEehhHHH
Confidence 3 67999999998875 87653 335 7789999999988 89763 567432 35999 999999999999
Q ss_pred HHHHHHHHHHHHHh
Q 013442 413 GAALHASLATRYLL 426 (443)
Q Consensus 413 ~~~~~a~~~~~l~~ 426 (443)
++++|+.++.+++.
T Consensus 378 ~~~~~~~~~~~l~~ 391 (393)
T 1cg2_A 378 RLYMAARLIMDLGA 391 (393)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999999985
No 7
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=1.4e-52 Score=419.98 Aligned_cols=368 Identities=19% Similarity=0.267 Sum_probs=292.8
Q ss_pred HHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeec--ccCceEEEEECCCCCcEEEEEEecccccCcccCCCc-
Q 013442 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFP--VAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWE- 126 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~--~~~~~via~~~~~~~~~I~~~~H~DtVp~~~~~~w~- 126 (443)
+++++++++|++|||+|++|.++++||.++|+++|++++.. +..+|++++++ .++|+|+|+|||||||+++..+|+
T Consensus 6 ~~~~~~l~~lv~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~g-~~~~~i~l~~H~D~Vp~~~~~~w~~ 84 (393)
T 1vgy_A 6 TQSLELAKELISRPSVTPDDRDCQKLMAERLHKIGFAAEEMHFGNTKNIWLRRG-TKAPVVCFAGHTDVVPTGPVEKWDS 84 (393)
T ss_dssp SHHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHTTTCEEEECCBTTBCEEEEEEC-SSSSEEEEEEECCBCCCCCGGGSSS
T ss_pred HHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHHHcCCcEEEEecCCCcEEEEEEC-CCCCEEEEEcccCCcCCCCcccCCC
Confidence 66899999999999999999999999999999999998763 35689999994 345899999999999999888895
Q ss_pred --cc-cCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCCc-c-chHHHHHHcCCC--CccceeeE
Q 013442 127 --HK-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEG-G-GGAKKMLDAGAL--ENVEAIFG 196 (443)
Q Consensus 127 --~~-~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEEg-~-~G~~~~~~~g~~--~~~d~~i~ 196 (443)
|. .++||++||||+ |++++++|+|+++|++.+..++++|+|+|++|||+ + .|++.+++.+.. ..+|++++
T Consensus 85 ~Pf~~~~~~g~l~grG~~D~k~~~aa~l~a~~~l~~~~~~~~~~v~~~~~~~EE~~~~~Ga~~~~~~~~~~~~~~d~~i~ 164 (393)
T 1vgy_A 85 PPFEPAERDGRLYGRGAADMKTSIACFVTACERFVAKHPNHQGSIALLITSDEEGDALDGTTKVVDVLKARDELIDYCIV 164 (393)
T ss_dssp CTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSSCCTTSHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCceEEECCEEEecCcccchHHHHHHHHHHHHHHHhcCCCCCcEEEEEEeccccCCcCCHHHHHHHHHhcCcCCCEEEE
Confidence 44 367899999998 79999999999999987778999999999999994 3 799988765322 24688877
Q ss_pred ecCCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHHhhccc-cCCCCCceEEEEEEE
Q 013442 197 LHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSRE-ADPLDSQVLTVAKFE 275 (443)
Q Consensus 197 ~~~~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~~~~~~-~~~~~~~t~~v~~i~ 275 (443)
.++.+..+.+.. +. .+.+|..+++|+++|+++|++.|+.|.||+..+++++.+|+....+. .+...+.+++++.|+
T Consensus 165 ~e~~~~~~~g~~-i~--~g~~G~~~~~i~v~G~~~Ha~~P~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~v~~i~ 241 (393)
T 1vgy_A 165 GEPTAVDKLGDM-IK--NGRRGSLSGNLTVKGKQGHIAYPHLAINPVHTFAPALLELTQEVWDEGNEYFPPTSFQISNIN 241 (393)
T ss_dssp CCCCBSSSTTSE-EE--CEECEEEEEEEEEECBCEETTCGGGCBCHHHHHHHHHHHHHHCCCCCCCSSCCCCEEEEEEEE
T ss_pred eCCCCcccCCce-eE--EeeeeEEEEEEEEEccCcccCCCccCCCHHHHHHHHHHHhhcccccccccccCCCeEEEeeEc
Confidence 665433333332 11 24579999999999999999999999999999999999998764222 223456799999999
Q ss_pred cCC-cCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcccCCHHHHHHHHHHHHHhc
Q 013442 276 GGG-AFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADML 354 (443)
Q Consensus 276 gG~-~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 354 (443)
||. +.|+||++|++.+|+|++|..+.+++.++|+++++. .++++++++.. ...|...+++++++.+.+++++.+
T Consensus 242 gG~~~~NviP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~----~~~~~~~~~~~-~~~p~~~~~~~l~~~~~~~~~~~~ 316 (393)
T 1vgy_A 242 GGTGATNVIPGELNVKFNFRFSTESTEAGLKQRVHAILDK----HGVQYDLQWSC-SGQPFLTQAGKLTDVARAAIAETC 316 (393)
T ss_dssp ECCSCTTEECSEEEEEEEEEECTTSCHHHHHHHHHHHHHH----TTCCEEEEEEE-EECCEECCSSHHHHHHHHHHHHHH
T ss_pred CCCCCCcccCCeEEEEEEEecCCCCCHHHHHHHHHHHHHH----hCCCeEEEEec-CCCcccCCCcHHHHHHHHHHHHHc
Confidence 997 899999999999999999999999999999998764 46666666521 223334567889999999999988
Q ss_pred CCcccccCCCCCCCchHHHHHhh-cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhhcCCCcc
Q 013442 355 GVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLLENQPKTT 433 (443)
Q Consensus 355 g~~~~~~~~~~~g~tDa~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~~~~~~~~~ 433 (443)
|.++. ...++|++|+++|.+. +|++ .+|+.+ ..+|++||+++++++.+++++|+.++.+++.. +.
T Consensus 317 g~~~~--~~~~~g~~D~~~~~~~~~P~v--~~Gp~~------~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~~~----~~ 382 (393)
T 1vgy_A 317 GIEAE--LSTTGGTSDGRFIKAMAQELI--ELGPSN------ATIHQINENVRLNDIPKLSAVYEGILVRLLAG----NA 382 (393)
T ss_dssp SSCCE--EECCSCCCTHHHHGGGEEEEE--ECCSBC------TTTTSTTCEEETTHHHHHHHHHHHHHHHHC--------
T ss_pred CCCce--EecCCccchHHHHHhCCCCEE--EECCCC------CCCCCCCCceeHHHHHHHHHHHHHHHHHHhcc----Cc
Confidence 88764 2457789999999985 8853 467432 35999999999999999999999999999853 34
Q ss_pred cCCcccc
Q 013442 434 LASRSLH 440 (443)
Q Consensus 434 ~~~~~~~ 440 (443)
..++|-|
T Consensus 383 ~~~~~~~ 389 (393)
T 1vgy_A 383 VEGGSHH 389 (393)
T ss_dssp -------
T ss_pred ccCCccc
Confidence 4445544
No 8
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=100.00 E-value=2.1e-52 Score=416.38 Aligned_cols=358 Identities=18% Similarity=0.219 Sum_probs=286.9
Q ss_pred HHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeee--cccCceEEEEECCCCCcEEEEEEecccccCcccCCCcc
Q 013442 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKF--PVAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWEH 127 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~--~~~~~~via~~~~~~~~~I~~~~H~DtVp~~~~~~w~~ 127 (443)
+++++++++|+++||+|++|.++++||.++|+++|++++. .+..+|++|+++ .++|+|+|+|||||||.++...|+.
T Consensus 3 ~~~~~~~~~L~~~ps~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~n~~a~~g-~~~~~i~l~aH~D~vp~~~~~~w~~ 81 (377)
T 3isz_A 3 EKVVSLAQDLIRRPSISPNDEGCQQIIAERLEKLGFQIEWMPFNDTLNLWAKHG-TSEPVIAFAGHTDVVPTGDENQWSS 81 (377)
T ss_dssp HHHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHHTTCEEEECCBTTBCEEEEEEE-SSSCEEEEEEECCBCCCCCGGGCSS
T ss_pred hHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHCCCceEEeecCCCceEEEEeC-CCCCEEEEeccccccCCCCcccCCC
Confidence 6789999999999999999999999999999999999875 235689999984 4469999999999999998778964
Q ss_pred c----cCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCCc-c-chHHHHHHcCCC--CccceeeE
Q 013442 128 K----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEG-G-GGAKKMLDAGAL--ENVEAIFG 196 (443)
Q Consensus 128 ~----~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEEg-~-~G~~~~~~~g~~--~~~d~~i~ 196 (443)
+ .++||++||||+ |+++++++.+++.|++.+..++++|.|+|+++||+ + .|++.+++.... ..+|++++
T Consensus 82 ~pf~~~~~~g~~~g~G~~D~k~g~~~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~~~~~G~~~~~~~~~~~~~~~d~~~~ 161 (377)
T 3isz_A 82 PPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEEATAKDGTIHVVETLMARDEKITYCMV 161 (377)
T ss_dssp CTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSSCCSSSHHHHHHHHHHTTCCCCEEEE
T ss_pred CCCCcEEECCEEEeCChhhhhHHHHHHHHHHHHHHHhCCCCCceEEEEEEcccccCccccHHHHHHHHHhcCCCCCEEEE
Confidence 4 346899999998 69999999999999887778899999999999994 4 599988764321 24788877
Q ss_pred ecCCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHHhhccc-cCCCCCceEEEEEEE
Q 013442 197 LHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSRE-ADPLDSQVLTVAKFE 275 (443)
Q Consensus 197 ~~~~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~~~~~~-~~~~~~~t~~v~~i~ 275 (443)
.++....+.|... . .+.+|..+++++++|+++|+|.|+.|+||+..+++++.+|++...+. .......+++++.|+
T Consensus 162 ~e~~~~~~~g~~i-~--~g~~g~~~~~i~~~G~~~Ha~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~v~~i~ 238 (377)
T 3isz_A 162 GEPSSAKNLGDVV-K--NGRRGSITGNLYIQGIQGHVAYPHLAENPIHKAALFLQELTTYQWDKGNEFFPPTSLQIANIH 238 (377)
T ss_dssp CCCCBSSSTTSEE-E--EEECEEEEEEEEEECC-------CGGGCHHHHHHHHHHHHHHCCCCCCCSSSCCCEEEEEEEE
T ss_pred cCCCCcccCCceE-E--EEcceEEEEEEEEEccccccCCCccCcCHHHHHHHHHHHHHhccccccccccCCceeEEEEEE
Confidence 6654433334321 1 23468899999999999999999999999999999999998864332 223456899999999
Q ss_pred cCC-cCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcccCCHHHHHHHHHHHHHhc
Q 013442 276 GGG-AFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADML 354 (443)
Q Consensus 276 gG~-~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 354 (443)
||. +.|+||++|++.+|+|+++..+.+++.++|++.+++ .++.+++++. ....|...+++++++.+++++++.+
T Consensus 239 gg~~~~nvip~~~~~~~diR~~~~~~~~~i~~~i~~~~~~----~g~~~~i~~~-~~~~p~~~~~~~l~~~l~~a~~~~~ 313 (377)
T 3isz_A 239 AGTGSNNVIPAELYIQFNLRYCTEVTDEIIKQKVAEMLEK----HNLKYRIEWN-LSGKPFLTKPGKLLDSITSAIEETI 313 (377)
T ss_dssp ECCSCSSCCCSEEEEEEEEEECTTSCHHHHHHHHHHHHHH----TTCCEEEEEE-ECCCCEECCTTHHHHHHHHHHHHHH
T ss_pred CCCCCCcccCCceEEEEEEecCCCCCHHHHHHHHHHHHHH----cCCCeEEEEE-ecCCCCcCCCCHHHHHHHHHHHHHh
Confidence 997 899999999999999999999999999999998764 5778888763 1233334567789999999999977
Q ss_pred CCcccccCCCCCCCchHHHHHhh-cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 013442 355 GVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLL 426 (443)
Q Consensus 355 g~~~~~~~~~~~g~tDa~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~~ 426 (443)
|.++.. ..++|++|++++.+. +|++. ||+. . ..+|+|||+++++++.+++++|+.++.+|++
T Consensus 314 g~~~~~--~~~~g~tDa~~~~~~g~~~v~--~Gp~-----~-~~~H~~~E~i~~~~l~~~~~i~~~~i~~ll~ 376 (377)
T 3isz_A 314 GITPKA--ETGGGTSDGRFIALMGAEVVE--FGPL-----N-STIHKVNECVSVEDLGKCGEIYHKMLVNLLD 376 (377)
T ss_dssp SCCCEE--EECSSCCSHHHHHTTTCEEEE--CCSB-----C-TTTTSTTCEEEHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCee--eccCcccHHHHHHHcCCCEEE--ECCC-----C-CcccCCCCcEEHHHHHHHHHHHHHHHHHHhh
Confidence 987642 356789999999887 66543 6743 3 3599999999999999999999999999985
No 9
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=100.00 E-value=4.2e-52 Score=416.95 Aligned_cols=360 Identities=21% Similarity=0.211 Sum_probs=296.6
Q ss_pred hHHHHhhcCchhHHHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeecc-------cCceEEEEECCC----CC
Q 013442 37 VKFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPV-------AVTGVVGYIGTG----QP 105 (443)
Q Consensus 37 ~~~~~~~~~~~~~~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~~-------~~~~via~~~~~----~~ 105 (443)
.....+++.++ +++++++++|++|||+|++|.++++||.++|+++|++++.+. .++|++|+++++ ++
T Consensus 13 ~~~~~~~~~~~--~~~~~~l~~L~~ips~s~~E~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~~nvia~~~g~~~~~~~ 90 (396)
T 3rza_A 13 ENLYFQGMINE--QRLLNTFLELVQIDSETGNESTIQPILKEKFIALGLDVKEDEAAKHPKLGANNLVCTMNSTIEEGEV 90 (396)
T ss_dssp ------CCSCH--HHHHHHHHHHHTSCCBTTCTTTHHHHHHHHHHHTTCEEEECSGGGSTTCSSCCEEEEECCCCC---C
T ss_pred cceeEEEeecH--HHHHHHHHHHeecCCCCcCHHHHHHHHHHHHHHCCCEEEEeccccccCCCCceEEEEECCcCCCCCC
Confidence 34556777777 999999999999999999999999999999999999988743 268999999764 46
Q ss_pred cEEEEEEecccccCcccCCCccccCCCCeeecCcc-------hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccc
Q 013442 106 PFVALRADMDALAMEESVEWEHKSKVPGKMHACGH-------DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGG 177 (443)
Q Consensus 106 ~~I~~~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~-------kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~ 177 (443)
|+|+|+|||||||+++ .|+...+.+|++||||+ |++++++|+|+++|++.+ .++++|.|+|+++|| ++.
T Consensus 91 ~~i~l~aH~D~vp~g~--~~~p~~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~-~~~~~v~~~~~~~EE~g~~ 167 (396)
T 3rza_A 91 PKLYLTSHMDTVVPAI--NVKPIVKDDGYIYSDGTTILGADDKAGLAAMLEVLQVIKEQQ-IPHGQIQFVITVGEESGLI 167 (396)
T ss_dssp CCEEEEEECCBCSSCS--SCCCEECTTSEEECCSSSCCCHHHHHHHHHHHHHHHHHHHHT-CCCCCEEEEEESCGGGTSH
T ss_pred CeEEEEEECCccCCCC--CcceEEecCCEEECCCccccCcccHHHHHHHHHHHHHHHhcC-CCCCCEEEEEEcccccccH
Confidence 9999999999999876 57443444599999997 599999999999999876 468999999999999 668
Q ss_pred hHHHHHHcCCCCccceeeEecCCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHHhh
Q 013442 178 GAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLV 257 (443)
Q Consensus 178 G~~~~~~~g~~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~~~ 257 (443)
|++.+.+++. ..++.+. .+++.+.+.+.+. .+|..+++|+++|+++|+|.|+.|+||+..+++++.+|+..
T Consensus 168 Ga~~~~~~~~--~~~~~~~--~~~~~~~g~i~~~----~~g~~~~~i~v~G~~~Ha~~p~~g~nai~~~~~~i~~l~~~- 238 (396)
T 3rza_A 168 GAKELNSELL--DADFGYA--IDASADVGTTVVG----APTQMLISAKIIGKTAHASTPKEGVSAINIAAKAISRMKLG- 238 (396)
T ss_dssp HHHHCCGGGC--CCSEEEE--EEESSCTTCEEEE----ECEEEEEEEEEECBCCBTTSGGGSBCHHHHHHHHHHHSCCE-
T ss_pred hHhhhchhhc--ccceEEE--EecCCCcceEEEc----CCceEEEEEEEEeEecCCCCccccccHHHHHHHHHHhcccC-
Confidence 9998865432 2344444 3444455665443 35889999999999999999999999999999999988652
Q ss_pred ccccCCCCCceEEEEEEEcCCcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcc-
Q 013442 258 SREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVT- 336 (443)
Q Consensus 258 ~~~~~~~~~~t~~v~~i~gG~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~- 336 (443)
..+ ...+++++.|+||.+.|+||++|++.+|+|+.|..+.+.+.++|++.++..+..+++.+++++ ...+|++
T Consensus 239 --~~~--~~~~~~vg~i~gG~~~NvIP~~a~~~~diR~~~~~~~~~~~~~i~~~~~~~a~~~g~~~~i~~--~~~~p~~~ 312 (396)
T 3rza_A 239 --QVD--EITTANIGKFHGGSATNIVADEVILEAEARSHDPERIKTQVKHMTDVFETTASELGGKAEVTV--EQSYPGFK 312 (396)
T ss_dssp --EEE--TTEEEEEEEEEECSCTTBCCCEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCEEEEEE--EEEECCEE
T ss_pred --CCC--CCceeeeeEEecCCCCcccCceEEEEEEEEeCCHHHHHHHHHHHHHHHHHHHHhcCCEEEEEE--EeccCCcc
Confidence 111 246899999999999999999999999999999999999999999999998888899998887 5667776
Q ss_pred -cCCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhh-cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHH
Q 013442 337 -VNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGA 414 (443)
Q Consensus 337 -~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~ 414 (443)
++|+++++.++++++++ |.+.. ...++|++|+++|.+. +|+++++.| . ..+|+|||+++++++.+++
T Consensus 313 ~~~d~~l~~~~~~~~~~~-g~~~~--~~~~~g~tD~~~~~~~giP~~~~g~g-------~-~~~H~~~E~v~~~~l~~~~ 381 (396)
T 3rza_A 313 INDNEAVVKIAQESARNL-GLSAN--TIISGGGSDGSIINTFGIPSVILGVG-------Y-EKIHTTNERMPIKSLNLLA 381 (396)
T ss_dssp CCTTSHHHHHHHHHHHHT-TCCCC--EEECSSCCHHHHHGGGTCCEEEEECC-------C-BSTTSTTCEEEHHHHHHHH
T ss_pred cCCCcHHHHHHHHHHHHc-CCCce--ecccceeccHHHHhhCCCcEEEECCC-------C-CCCCCCcceeEHHHHHHHH
Confidence 45788999999999886 87653 3357889999999887 998765433 2 3599999999999999999
Q ss_pred HHHHHHHHHHHhh
Q 013442 415 ALHASLATRYLLE 427 (443)
Q Consensus 415 ~~~a~~~~~l~~~ 427 (443)
++|+.++.++..+
T Consensus 382 ~~~~~~~~~l~~~ 394 (396)
T 3rza_A 382 SQVLEIIKIVARQ 394 (396)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999753
No 10
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=100.00 E-value=9.2e-52 Score=424.90 Aligned_cols=378 Identities=13% Similarity=0.133 Sum_probs=302.3
Q ss_pred cccchHHHHhhcCchhHHHHHHHHHHHHhCCCC--Ccc------cHHHHHHHHHHHHhCCCCeeecc--------c----
Q 013442 33 TQIPVKFLDFAKKPEIFYWMVNIRRKIHENPEL--GFQ------EFETSKLIRAELDQMGIPYKFPV--------A---- 92 (443)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~i~ll~~l~~ipS~--s~~------E~~~~~~l~~~l~~~G~~~~~~~--------~---- 92 (443)
+...+++.+++++++ +++++++++|++|||+ |++ |.++++||+++|+++||+++... +
T Consensus 10 ~~~~~~i~~~i~~~~--~~~i~~l~~lv~ips~~~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~ 87 (485)
T 3dlj_A 10 PALLEKVFQYIDLHQ--DEFVQTLKEWVAIESDSVQPVPRFRQELFRMMAVAADTLQRLGARVASVDMGPQQLPDGQSLP 87 (485)
T ss_dssp STTHHHHHHHHHHTH--HHHHHHHHHHHTSCCBSSSCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCEEEC--CCEEE
T ss_pred hHHHHHHHHHHHHhH--HHHHHHHHHHhcCCCccCCCCccccHHHHHHHHHHHHHHHHcCCeEEEEecCcccccCCCccC
Confidence 456678999999988 9999999999999999 877 57899999999999999987632 2
Q ss_pred -CceEEEEECCC-CCcEEEEEEecccccCcccCCCc---cc-cCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCc
Q 013442 93 -VTGVVGYIGTG-QPPFVALRADMDALAMEESVEWE---HK-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKG 163 (443)
Q Consensus 93 -~~~via~~~~~-~~~~I~~~~H~DtVp~~~~~~w~---~~-~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~ 163 (443)
.+|++++++++ ++|+|+|+|||||||+++.+.|+ |. .+++|+|||||+ |++++++|+|+++|++.+..+++
T Consensus 88 ~~~~v~a~~~~~~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~ 167 (485)
T 3dlj_A 88 IPPVILAELGSDPTKGTVCFYGHLDVQPADRGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRALEQDLPV 167 (485)
T ss_dssp CCCEEEEEECCCTTSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSS
T ss_pred CCcEEEEEECCCCCCCEEEEEeeecCCCCCCcccCCCCCCccEEECCEEEecccccCcHHHHHHHHHHHHHHHhCCCCCc
Confidence 35799999765 46899999999999999877895 44 357899999998 69999999999999998888999
Q ss_pred eEEEEEeccCC-ccchHHHHHHcCC---CCccceeeEecCCCCC-CCceEEeecCcccccceEEEEEEEecCC--CCCCC
Q 013442 164 TIVLVFQPAEE-GGGGAKKMLDAGA---LENVEAIFGLHVSSLF-PVGTVASRPGPTLAAGGFFEAVINGKGG--HAAIP 236 (443)
Q Consensus 164 ~i~~i~~~dEE-g~~G~~~~~~~g~---~~~~d~~i~~~~~~~~-~~g~~~~~~g~~~~g~~~~~v~v~G~~a--Hss~p 236 (443)
+|+|+|+++|| ++.|++.+++++. ++++|++++.|+.... ....+. .+++|..+++|+++|+++ |+|.
T Consensus 168 ~v~~~~~~~EE~g~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~----~g~~g~~~~~i~v~G~~~~~H~~~- 242 (485)
T 3dlj_A 168 NIKFIIEGMEEAGSVALEELVEKEKDRFFSGVDYIVISDNLWISQRKPAIT----YGTRGNSYFMVEVKCRDQDFHSGT- 242 (485)
T ss_dssp EEEEEEESCGGGTTTTHHHHHHHHTTTTSTTCCEEEECCCBCCC--CCEEE----EEECEEEEEEEEEESCSSCEETTT-
T ss_pred cEEEEEEcccccCCccHHHHHHhhhhhcccCCCEEEEcCCCccCCCCeeEE----EeccceEEEEEEEEECCCCCcCCC-
Confidence 99999999999 6689999998763 5678999988753211 112221 235799999999999999 9997
Q ss_pred CCCCcHHHHHHHHHHHHHHhhccc-----------cCC-------------C---------------------------C
Q 013442 237 QHTIDPIVAASNVIVSLQHLVSRE-----------ADP-------------L---------------------------D 265 (443)
Q Consensus 237 ~~g~NAi~~~~~~i~~l~~~~~~~-----------~~~-------------~---------------------------~ 265 (443)
.|.||+..+..++..|+.+..+. ..+ + .
T Consensus 243 -~g~~a~~~~~~l~~~l~~l~~~~g~i~ipg~~~~v~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 321 (485)
T 3dlj_A 243 -FGGILHEPMADLVALLGSLVDSSGHILVPGIYDEVVPLTEEEINTYKAIHLDLEEYRNSSRVEKFLFDTKEEILMHLWR 321 (485)
T ss_dssp -STTSSCCHHHHHHHHHTTSBCTTSCBCSTTTTTTSCCCCHHHHHHHHTSCCCHHHHHHHHTCSCCSCSSHHHHHHHHHT
T ss_pred -CCccccCHHHHHHHHHHhhCCCCCCEeCCCcccccCCCCHHHHHHHHhCCCCHHHHHHhcCCCcccccchHHHHHHHhc
Confidence 35555555555555555443221 011 0 1
Q ss_pred CceEEEEEEEcC----CcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhC--CeEEEEeeccCCCCcccCC
Q 013442 266 SQVLTVAKFEGG----GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQR--CNATVTFDDKSFYPVTVNN 339 (443)
Q Consensus 266 ~~t~~v~~i~gG----~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~d 339 (443)
..+++|+.|+|| .+.|+||++|++.+++|+.+.++.+.+.++|+++++..+..++ +++++++ ...+|++.++
T Consensus 322 ~~~~~v~~i~gG~~gp~a~NVIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~~~~v~~--~~~~pp~~~~ 399 (485)
T 3dlj_A 322 YPSLSIHGIEGAFDEPGTKTVIPGRVIGKFSIRLVPHMNVSAVEKQVTRHLEDVFSKRNSSNKMVVSM--TLGLHPWIAN 399 (485)
T ss_dssp SCEEEEEEEESSCCSSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTCCSSEEEEEE--EEEECCEECC
T ss_pred CCceEEEEEecCCcCCCCCceeCCeeEEEEEEEcCCCCCHHHHHHHHHHHHHHhccccCCCeeEEEEE--cCCCCceeCC
Confidence 578999999999 8999999999999999999999999999999999999888877 4788877 5567776554
Q ss_pred --HHHHHHHHHHHHHhcCCcccccCCCCCCCchH-HHHHhhcCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHH
Q 013442 340 --KNLHEHFQKVAADMLGVQNIKENRPLMGTEDF-SFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAAL 416 (443)
Q Consensus 340 --~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa-~~~~~~ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~ 416 (443)
+++++.+++++++++|.++... .++|+.|+ .+|.+.+|..++++|.... ....|+|||+++++++..++++
T Consensus 400 ~d~~~~~~~~~a~~~~~G~~~~~~--~~ggs~Dfa~~~~~~~p~~~i~~g~g~~----~~~~H~p~E~i~~~~l~~g~~~ 473 (485)
T 3dlj_A 400 IDDTQYLAAKRAIRTVFGTEPDMI--RDGSTIPIAKMFQEIVHKSVVLIPLGAV----DDGEHSQNEKINRWNYIEGTKL 473 (485)
T ss_dssp TTSHHHHHHHHHHHHHHSSCCEEE--EESSCCHHHHHHHHHTC--CEECCCBCT----TCCTTSTTCEEEHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCceec--CCCCchhHHHHHHHHhCCCEEEecCCCC----CCCCcCCCCCccHHHHHHHHHH
Confidence 4899999999999879876432 46788896 5777667765566665432 1459999999999999999999
Q ss_pred HHHHHHHHHh
Q 013442 417 HASLATRYLL 426 (443)
Q Consensus 417 ~a~~~~~l~~ 426 (443)
|+.++.++..
T Consensus 474 l~~~l~~la~ 483 (485)
T 3dlj_A 474 FAAFFLEMAQ 483 (485)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhh
Confidence 9999998864
No 11
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=100.00 E-value=1e-50 Score=403.86 Aligned_cols=345 Identities=20% Similarity=0.223 Sum_probs=290.0
Q ss_pred HHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeecc-------cCceEEEEECCC--CCcEEEEEEecccccCc
Q 013442 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPV-------AVTGVVGYIGTG--QPPFVALRADMDALAME 120 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~~-------~~~~via~~~~~--~~~~I~~~~H~DtVp~~ 120 (443)
+++++++++|++|||+|++|.++++||.++|+++|++++.+. .++|++++++++ ++|+|+|+|||||||++
T Consensus 6 ~~~~~~l~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~~nv~a~~~g~~~~~~~v~l~aH~D~vp~~ 85 (373)
T 3gb0_A 6 ERLVNEFMELVQVDSETKFEAEICKVLTKKFTDLGVEVFEDDTMAVTGHGAGNLICTLPATKDGVDTIYFTSHMDTVVPG 85 (373)
T ss_dssp HHHHHHHHHHHTSCCBTTCCHHHHHHHHHHHHHTTCEEEECSCHHHHCCSSCCEEEEECCSSTTCCCEEEEEECCBCSSC
T ss_pred HHHHHHHHHHhcccCCCccHHHHHHHHHHHHHHCCCEEEEeccccccCCCceeEEEEecCCCCCCCEEEEEEECcccCCC
Confidence 789999999999999999999999999999999999988753 258999999764 46999999999999987
Q ss_pred ccCCCccccCCCCeeecCcc-------hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchHHHHHHcCCCCccc
Q 013442 121 ESVEWEHKSKVPGKMHACGH-------DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVE 192 (443)
Q Consensus 121 ~~~~w~~~~~~~g~l~GrG~-------kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~~~~~g~~~~~d 192 (443)
+ .|+ +.+++|++||||+ |++++++|+++++|++.+. ++++|.|+|+++|| ++.|++.+..++. .+|
T Consensus 86 ~--~~~-p~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~-~~~~v~~~~~~~EE~g~~Ga~~~~~~~~--~~~ 159 (373)
T 3gb0_A 86 N--GIK-PSIKDGYIVSDGTTILGADDKAGLASMFEAIRVLKEKNI-PHGTIEFIITVGEESGLVGAKALDRERI--TAK 159 (373)
T ss_dssp S--SCC-CEEETTEEECCSSSCCCHHHHHHHHHHHHHHHHHHHTTC-CCCCEEEEEESCGGGTSHHHHHSCGGGC--CCS
T ss_pred C--CcC-cEEECCEEECCCccccCcccHHHHHHHHHHHHHHHhcCC-CCCCEEEEEEeccccCchhhhhhCHHhc--CCC
Confidence 6 564 2567799999996 4899999999999998774 78999999999999 6689998854332 344
Q ss_pred eeeEecCCCCCCCceEEeecCcccccceEEEEEEEecCCCCC-CCCCCCcHHHHHHHHHHHHHHhhccccCCCCCceEEE
Q 013442 193 AIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAA-IPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTV 271 (443)
Q Consensus 193 ~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss-~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v 271 (443)
+.+. .++..+.+.+.+. .+|..+++|+++|+++|++ .|+.|+||+..+++++.+|+.. ..+ ...++++
T Consensus 160 ~~~~--~~~~~~~g~i~~~----~~g~~~~~i~~~G~~~Ha~~~p~~g~nai~~~~~~i~~l~~~---~~~--~~~~~~v 228 (373)
T 3gb0_A 160 YGYA--LDSDGKVGEIVVA----APTQAKVNAIIRGKTAHAGVAPEKGVSAITIAAKAIAKMPLG---RID--SETTANI 228 (373)
T ss_dssp EEEE--EEECSCTTEEEEE----ECEEEEEEEEEECBCCBTTTCGGGSBCHHHHHHHHHTTSCCE---EEE--TTEEEEE
T ss_pred EEEE--EcCCCCCCeEEEc----CCCcEEEEEEEEeEecCCCCChhhCcCHHHHHHHHHHhcccc---cCC--Cccccce
Confidence 4444 3444455665443 3688999999999999999 8999999999999999987642 111 2468899
Q ss_pred EEEEcCCcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcc--cCCHHHHHHHHHH
Q 013442 272 AKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVT--VNNKNLHEHFQKV 349 (443)
Q Consensus 272 ~~i~gG~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~d~~~~~~~~~~ 349 (443)
+.|+||.+.|+||++|++.+|+|+.+.++.+++.++|++.++..+..+++.+++++ ...+|++ ++|+++++.++++
T Consensus 229 g~i~gG~~~Nvip~~~~~~~d~R~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~i~~--~~~~~~~~~~~~~~l~~~~~~~ 306 (373)
T 3gb0_A 229 GRFEGGTQTNIVCDHVQIFAEARSLINEKMEAQVAKMKEAFETTAKEMGGHADVEV--NVMYPGFKFADGDHVVEVAKRA 306 (373)
T ss_dssp EEEEECSCTTBCCCEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCEEEEEE--EEEECCEECCTTCHHHHHHHHH
T ss_pred eEEecCcccccccceEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHhcCCeEEEEE--ecccCCcccCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998888899998887 5566766 4578899999999
Q ss_pred HHHhcCCcccccCCCCCCCchHHHHHhh-cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 013442 350 AADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRY 424 (443)
Q Consensus 350 ~~~~~g~~~~~~~~~~~g~tDa~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l 424 (443)
+++. |.++. ...++|++|+++|.+. +|+++++.| . ..+|+|||+++++++.+++++|+.++.++
T Consensus 307 ~~~~-g~~~~--~~~~~g~~D~~~~~~~gip~~~~g~~-------~-~~~H~~~E~i~~~~l~~~~~~~~~~l~~l 371 (373)
T 3gb0_A 307 AEKI-GRTPS--LHQSGGGSDANVIAGHGIPTVNLAVG-------Y-EEIHTTNEKIPVEELAKTAELVVAIIEEV 371 (373)
T ss_dssp HHHT-TCCCE--EEECSSCCHHHHHHHTTCCEEEEECC-------C-BSTTSTTCEEEHHHHHHHHHHHHHHHHHH
T ss_pred HHHh-CCCce--EecccCcchHHHHHhCCCCEEEecCC-------C-CcCcCCceEEEHHHHHHHHHHHHHHHHHh
Confidence 9985 87653 3457889999999987 998765433 2 25999999999999999999999999988
No 12
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=100.00 E-value=2.7e-51 Score=407.42 Aligned_cols=343 Identities=17% Similarity=0.165 Sum_probs=276.7
Q ss_pred HHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCC-eeecccCceEEEEECCCCCcEEEEEEecccccCcccCCCccc
Q 013442 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIP-YKFPVAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWEHK 128 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~-~~~~~~~~~via~~~~~~~~~I~~~~H~DtVp~~~~~~w~~~ 128 (443)
+++++++++|++|||+|++|.++++||.++|+++|++ ++....++|++++++++++|+|+|+|||||||+++ .|++.
T Consensus 13 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~a~~~~~~~~~v~l~~H~D~vp~~~--~~~~~ 90 (369)
T 3tx8_A 13 GDPIVLTQRLVDIPSPSGQEKQIADEIEDALRNLNLPGVEVFRFNNNVLARTNRGLASRVMLAGHIDTVPIAD--NLPSR 90 (369)
T ss_dssp SCHHHHHHHHHSSCCBTTCTHHHHHHHHHHHHTTTCTTCEEEEETTEEEEECCCCCSCEEEEEEECCBSCCCS--CCSCE
T ss_pred HHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHhcCCCCcEEeccCCcEEEEecCCCCCeEEEEcccCccCCCC--CCCCe
Confidence 6689999999999999999999999999999999984 55544567999999766669999999999999987 56554
Q ss_pred cCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-cc--chHHHHHHcCC-CCccceeeEecCCC
Q 013442 129 SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG--GGAKKMLDAGA-LENVEAIFGLHVSS 201 (443)
Q Consensus 129 ~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~--~G~~~~~~~g~-~~~~d~~i~~~~~~ 201 (443)
. ++|++||||+ |++++++|+|+++|++. ..++++|.|+|+++|| ++ .|++++++++. .-++|+++..+ +
T Consensus 91 ~-~~g~~~g~G~~D~K~~~a~~l~a~~~l~~~-~~~~~~v~~~~~~~EE~g~~~~G~~~~~~~~~~~~~~~~~i~~e--p 166 (369)
T 3tx8_A 91 V-EDGIMYGCGTVDMKSGLAVYLHTFATLATS-TELKHDLTLIAYECEEVADHLNGLGHIRDEHPEWLAADLALLGE--P 166 (369)
T ss_dssp E-CSSEEESSSTTTTHHHHHHHHHHHHHHTSC-TTCCSEEEEEEECCCSSCTTSCHHHHHHHHCGGGGCCSEEEECC--C
T ss_pred E-ECCEEEcCCcccchHHHHHHHHHHHHHHhh-cCCCccEEEEEEeccccCcccccHHHHHHhcccccCCCEEEEeC--C
Confidence 3 5899999998 59999999999999875 4789999999999999 54 69999998762 12456666543 3
Q ss_pred CCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHHhhccccC--CC-CCceEEEEEEEcCC
Q 013442 202 LFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREAD--PL-DSQVLTVAKFEGGG 278 (443)
Q Consensus 202 ~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~~~~~~~~--~~-~~~t~~v~~i~gG~ 278 (443)
+. +.+. .+++|..+++|+++|+++|+|.|+.|.||+..+++++.+|+++..+..+ +. ...+++++.|+||.
T Consensus 167 ~~--~~i~----~~~~G~~~~~i~v~G~~~Ha~~p~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~vg~i~gG~ 240 (369)
T 3tx8_A 167 TG--GWIE----AGCQGNLRIKVTAHGVRAHSARSWLGDNAMHKLSPIISKVAAYKAAEVNIDGLTYREGLNIVFCESGV 240 (369)
T ss_dssp CT--TCEE----ESBCEEEEEEEEEECBCCBTTSGGGSBCTGGGGHHHHHHHHHCCCCEEEETTEEEECEEEEEEEEECS
T ss_pred CC--Ccee----eecceEEEEEEEEeeeccccCCCCcCcCHHHHHHHHHHHHHhhcccccccCCcccCceEEEEEEECCC
Confidence 22 3332 2457999999999999999999999999999999999999987543321 11 24689999999999
Q ss_pred cCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcccCCHHHHHHHHHHHHHhcCC-c
Q 013442 279 AFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGV-Q 357 (443)
Q Consensus 279 ~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~-~ 357 (443)
+.|+||++|++.+|+|++|.++.+++.++|++++++.+ ..++++++... ..++++. .++++++.+.+++ |. +
T Consensus 241 ~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~-~~g~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~----g~~~ 313 (369)
T 3tx8_A 241 ANNVIPDLAWMNLNFRFAPNRDLNEAIEHVVETLELDG-QDGIEWAVEDG-AGGALPG-LGQQVTSGLIDAV----GREK 313 (369)
T ss_dssp BTTBCCSEEEEEEEEEECTTSCHHHHHHHHHHHTTTTT-STTEEEEEEEE-ECCBCCC-TTSHHHHHHHHHH----CGGG
T ss_pred CCccccCcEEEEEEEecCCCCCHHHHHHHHHHHHHhcc-cCCeEEEEEec-CCCCCCC-CCCHHHHHHHHHc----CCCC
Confidence 99999999999999999999999999999999988665 46777776421 3445443 3555555555442 65 3
Q ss_pred ccccCCCCCCCchHHHHHhh-cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHH
Q 013442 358 NIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (443)
Q Consensus 358 ~~~~~~~~~g~tDa~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~ 422 (443)
+ ....|++|+++|.+. +|++. || ||....+|+|||+++++++.+++++|+.++.
T Consensus 314 ~----~~~~ggtD~~~~~~~giP~~~--~G-----pg~~~~~H~~~E~v~~~~l~~~~~~l~~~l~ 368 (369)
T 3tx8_A 314 I----RAKFGWTDVSRFSAMGIPALN--FG-----AGDPSFAHKRDEQCPVEQITDVAAILKQYLS 368 (369)
T ss_dssp E----EECCSCCTHHHHHTTTCCEEE--EC-----SSCSSSSSCTTCEEEHHHHHHHHHHHHHHHH
T ss_pred C----cccccccchHHHhhCCCCEEE--EC-----CCChhhCCCCCcEEEHHHHHHHHHHHHHHhh
Confidence 3 245678999999987 99764 66 5555679999999999999999999999875
No 13
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=100.00 E-value=4.6e-50 Score=410.74 Aligned_cols=374 Identities=12% Similarity=0.040 Sum_probs=292.5
Q ss_pred hHHHHhhcCchhHHHHHHHHHHHHhCCCCCcc----------cHHHHHHHHHHHHhCCCC---eee---cccCceEEEEE
Q 013442 37 VKFLDFAKKPEIFYWMVNIRRKIHENPELGFQ----------EFETSKLIRAELDQMGIP---YKF---PVAVTGVVGYI 100 (443)
Q Consensus 37 ~~~~~~~~~~~~~~~~i~ll~~l~~ipS~s~~----------E~~~~~~l~~~l~~~G~~---~~~---~~~~~~via~~ 100 (443)
+++.+++++++ .+++++++++|++|||+|++ |.++++|++++|+++||+ ++. ...++|++|++
T Consensus 6 ~~~~~~~~~~~-~~~~~~~l~~lv~ips~s~~~~~~~~~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~~~~~v~a~~ 84 (472)
T 3pfe_A 6 QGLYDYICQQW-QEEILPSLCDYIKIPNKSPHFDAKWEEHGYMEQAVNHIANWCKSHAPKGMTLEIVRLKNRTPLLFMEI 84 (472)
T ss_dssp HHHHHHHHHHH-HHTHHHHHHHHHTCCCBCGGGCTTHHHHCHHHHHHHHHHHHHHHTCCTTCEEEEECCTTSCCEEEEEE
T ss_pred HHHHHHHHHhh-HHHHHHHHHHHhCCCCcCCCccccccccchHHHHHHHHHHHHHHcCCCCcceEEEecCCCCcEEEEEE
Confidence 46677776642 15699999999999999965 889999999999999995 433 22368999999
Q ss_pred CCCCCcEEEEEEecccccCcccCCCc-----cc-cCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEec
Q 013442 101 GTGQPPFVALRADMDALAMEESVEWE-----HK-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQP 171 (443)
Q Consensus 101 ~~~~~~~I~~~~H~DtVp~~~~~~w~-----~~-~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~ 171 (443)
++.++|+|+|+|||||||+++ .|+ |. .++||+|||||+ |++++++|+|+++|++.+..++ +|+|+|++
T Consensus 85 ~g~~~~~i~l~~H~D~vp~~~--~w~~~~~Pf~~~~~~g~~~grG~~D~K~~~a~~l~a~~~l~~~~~~~~-~v~~~~~~ 161 (472)
T 3pfe_A 85 PGQIDDTVLLYGHLDKQPEMS--GWSDDLHPWKPVLKNGLLYGRGGADDGYSAYASLTAIRALEQQGLPYP-RCILIIEA 161 (472)
T ss_dssp CCSEEEEEEEEEECCBCCCCS--CCCTTCBTTBCEEETTEEESTTCCCCCHHHHHHHHHHHHHHHTTCCCE-EEEEEEES
T ss_pred cCCCCCeEEEEccccCCCCcC--CCCcCCCCCceEEECCEEEEeCcccCcHHHHHHHHHHHHHHHcCCCCC-cEEEEEEe
Confidence 765458999999999999974 685 33 357999999998 6999999999999999886666 99999999
Q ss_pred cCC-ccchHHHHHHcC--CCCccceeeEecCCCCCCCceEEeecCcccccceEEE--EEEEecCCCCCCCCCC-CcHHHH
Q 013442 172 AEE-GGGGAKKMLDAG--ALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFE--AVINGKGGHAAIPQHT-IDPIVA 245 (443)
Q Consensus 172 dEE-g~~G~~~~~~~g--~~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~--v~v~G~~aHss~p~~g-~NAi~~ 245 (443)
+|| ++.|++.+++++ .++++|++++.|+....+ +...+. .+++|..+++ |+++|+++|||.|+.+ .||+..
T Consensus 162 ~EE~g~~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~i~--~g~~G~~~~~~~v~~~G~~~H~~~~~~~~~nai~~ 238 (472)
T 3pfe_A 162 CEESGSYDLPFYIELLKERIGKPSLVICLDSGAGNY-EQLWMT--TSLRGNLVGKLTVELINEGVHSGSASGIVADSFRV 238 (472)
T ss_dssp CGGGTSTTHHHHHHHHHHHHCCCSEEEEECCBCSCS-SSCEEE--EEECEEEEEEEEEESCSSCBCHHHHTTTSCCHHHH
T ss_pred CCCCCChhHHHHHHHhHhhccCCCEEEEeCCCcCCC-CCeeEE--EeeeEEEEEEEEEEeCCCCcccCCCCCCCCCHHHH
Confidence 999 668999999875 344689999888543221 222222 2346777766 5558999999988754 599999
Q ss_pred HHHHHHHHHHhh-ccc--------c-----------------------------CCC-C-----------CceEEEEEEE
Q 013442 246 ASNVIVSLQHLV-SRE--------A-----------------------------DPL-D-----------SQVLTVAKFE 275 (443)
Q Consensus 246 ~~~~i~~l~~~~-~~~--------~-----------------------------~~~-~-----------~~t~~v~~i~ 275 (443)
+++++.+|++.. .+. . ++. + .++++++.|+
T Consensus 239 ~~~~i~~l~~~~~~~i~i~gf~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tl~i~~i~ 318 (472)
T 3pfe_A 239 ARQLISRIEDENTGEIKLPQLYCDIPDERIKQAKQCAEILGEQVYSEFPWIDSAKPVIQDKQQLILNRTWRPALTVTGAD 318 (472)
T ss_dssp HHHHHHHHBCTTTCCBCCGGGCCCCCHHHHHHHHHHHHHHGGGGTTTSCCCTTCCCSCSCHHHHHHHHHTSCEEEEEEEE
T ss_pred HHHHHHHhhCcCCCCEeCCCcccCCCCccHHHHHHHhhhccHHHHHhcccccCccccccchHHHHHHhhcCCcEEEeeee
Confidence 999999998762 100 0 001 0 4799999999
Q ss_pred cC----CcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccC-CCCcccC---CHHHHHHHH
Q 013442 276 GG----GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKS-FYPVTVN---NKNLHEHFQ 347 (443)
Q Consensus 276 gG----~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~---d~~~~~~~~ 347 (443)
|| .+.|+||++|++++|+|+.+.++.+.+.++|+++++..+ .++++++++. .. .+|++.. ++.+++.++
T Consensus 319 gG~~~g~a~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~~-~~g~~v~v~~--~~~~~pp~~~~~n~~~l~~~~~ 395 (472)
T 3pfe_A 319 GFPAIADAGNVMRPVTSLKLSMRLPPLVDPEAASVAMEKALTQNP-PYNAKVDFKI--QNGGSKGWNAPLLSDWLAKAAS 395 (472)
T ss_dssp SCCCTTTCCSCBCSEEEEEEEEEECTTCCHHHHHHHHHHHHHSSC-GGGCEEEEEE--CSCCBCCEECCCCCHHHHHHHH
T ss_pred cCcCCCCCCCEeCCccEEEEEeecCCCCCHHHHHHHHHHHHHhhC-CCCeEEEEEe--cCCCCCcccCCCCChHHHHHHH
Confidence 97 699999999999999999999999999999999998755 4688888877 55 6777653 455889999
Q ss_pred HHHHHhcCCcccccCCCCCCCch-H-HHHHhhcCcE-EEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 013442 348 KVAADMLGVQNIKENRPLMGTED-F-SFFAEAIPGY-FYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRY 424 (443)
Q Consensus 348 ~~~~~~~g~~~~~~~~~~~g~tD-a-~~~~~~ip~~-~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l 424 (443)
+++++++|.+++. ...|++| + ++|.+.+|.+ ++++|+... + ..+|+|||+++++++.+++++|+.++.++
T Consensus 396 ~a~~~~~G~~~~~---~~~gg~d~f~~~~~~~~Pg~p~v~~G~g~~--~--~~~H~p~E~i~~~~l~~g~~~l~~~l~~l 468 (472)
T 3pfe_A 396 EASMTYYDKPAAY---MGEGGTIPFMSMLGEQFPKAQFMITGVLGP--H--SNAHGPNEFLHLDMVKKLTSCVSYVLYSF 468 (472)
T ss_dssp HHHHHHHSSCCEE---EEESSCCHHHHHHHHHCTTCEEEEECCBCT--T--CCTTSTTCEEEHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCcee---ccCCCchhhHHHHHHHcCCCCEEEecCCCC--C--CCCcCCCcceeHHHHHHHHHHHHHHHHHH
Confidence 9999977987642 2345666 4 6677667765 556775432 1 46999999999999999999999999998
Q ss_pred Hhh
Q 013442 425 LLE 427 (443)
Q Consensus 425 ~~~ 427 (443)
...
T Consensus 469 a~~ 471 (472)
T 3pfe_A 469 SQK 471 (472)
T ss_dssp HHC
T ss_pred hhc
Confidence 753
No 14
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=100.00 E-value=1.1e-49 Score=409.24 Aligned_cols=373 Identities=15% Similarity=0.114 Sum_probs=303.1
Q ss_pred hHHHHhhcCchhHHHHHHHHHHHHhCCCCCccc------HHHHHHHHHHHHhCCCCeeecc--------cC-----ceEE
Q 013442 37 VKFLDFAKKPEIFYWMVNIRRKIHENPELGFQE------FETSKLIRAELDQMGIPYKFPV--------AV-----TGVV 97 (443)
Q Consensus 37 ~~~~~~~~~~~~~~~~i~ll~~l~~ipS~s~~E------~~~~~~l~~~l~~~G~~~~~~~--------~~-----~~vi 97 (443)
+++.++++.+. +++++++++|++|||+|++| .++++||+++|+++|++++... ++ +|++
T Consensus 9 ~~~~~~~~~~~--~~~~~~l~~l~~~ps~s~~e~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~v~ 86 (479)
T 2zog_A 9 KAVFQYIDENQ--DRYVKKLAEWVAIQSVSAWPEKRGEIRRMMEVAAADVQRLGGSVELVDIGKQKLPDGSEIPLPPILL 86 (479)
T ss_dssp HHHHHHHHHTH--HHHHHHHHHHHHSCCBTTCGGGHHHHHHHHHHHHHHHHHTTCEEEEECCCEEECTTSCEEECCCEEE
T ss_pred HHHHHHHHHhH--HHHHHHHHHHhcCCCccCCcccchHHHHHHHHHHHHHHHcCCeEEEeeccccccCCCcccCCCCEEE
Confidence 46778888777 89999999999999999876 7899999999999999987642 22 7999
Q ss_pred EEECCC-CCcEEEEEEecccccCcccCCCccc----cCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEE
Q 013442 98 GYIGTG-QPPFVALRADMDALAMEESVEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVF 169 (443)
Q Consensus 98 a~~~~~-~~~~I~~~~H~DtVp~~~~~~w~~~----~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~ 169 (443)
++++++ ++|+|+|+|||||||+++..+|+.+ .++||+|||||+ |++++++|+|+++|++.+..++++|.|+|
T Consensus 87 a~~~~~~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grGa~D~K~g~a~~l~a~~~l~~~~~~~~~~v~~~~ 166 (479)
T 2zog_A 87 GKLGSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTLVEREGKLYGRGSTDDKGPVAGWMNALEAYQKTGQEIPVNLRFCL 166 (479)
T ss_dssp EEECCCTTSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEE
T ss_pred EEecCCCCCCeEEEEEecCCCCCCccccCcCCCCcceeECCEEEeeccccChHHHHHHHHHHHHHHHhCCCCCCcEEEEE
Confidence 999764 3589999999999999887789543 346899999995 69999999999999998888999999999
Q ss_pred eccCC-ccchHHHHHHcC---CCCccceeeEecCCCC-CCCceEEeecCcccccceEEEEEEEecC--CCCCCCCCCCcH
Q 013442 170 QPAEE-GGGGAKKMLDAG---ALENVEAIFGLHVSSL-FPVGTVASRPGPTLAAGGFFEAVINGKG--GHAAIPQHTIDP 242 (443)
Q Consensus 170 ~~dEE-g~~G~~~~~~~g---~~~~~d~~i~~~~~~~-~~~g~~~~~~g~~~~g~~~~~v~v~G~~--aHss~p~~g~NA 242 (443)
+++|| |+.|++.+++++ .+.++|++++.++... ...+.+. .+++|..+++|+++|++ +|||.+ |.||
T Consensus 167 ~~~EE~g~~Ga~~~~~~~~~~~~~~~d~~i~~e~~~~~~~~~~i~----~~~~G~~~~~i~v~G~~~~~Hs~~~--g~~a 240 (479)
T 2zog_A 167 EGMEESGSEGLDELIFAQKDKFFKDVDYVCISDNYWLGKNKPCIT----YGLRGICYFFIEVECSDKDLHSGVY--GGSV 240 (479)
T ss_dssp ESCGGGTCTTHHHHHHHTTTTTTTTCCEEEECCCBCSSSSSCEEE----EEECEEEEEEEEEECCSSCEEHHHH--TTTS
T ss_pred ecccccCCccHHHHHHhhhhhhcccCCEEEEeCCCcCCCCCeEEE----EecceEEEEEEEEEeCCCCCccCCC--CCCc
Confidence 99999 668999999876 4456888888765321 1123332 24679999999999999 999985 7899
Q ss_pred HHHHHHHHHHHHHhhccccC------------------------CC---------------------------CCceEEE
Q 013442 243 IVAASNVIVSLQHLVSREAD------------------------PL---------------------------DSQVLTV 271 (443)
Q Consensus 243 i~~~~~~i~~l~~~~~~~~~------------------------~~---------------------------~~~t~~v 271 (443)
+..+++++..|+++..+... +. ...++++
T Consensus 241 i~~~~~~i~~l~~l~~~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v 320 (479)
T 2zog_A 241 HEAMTDLISLMGCLVDKKGKILIPGINDAVAPVTDEEHALYDHIDFDMEEFAKDVGAETLLHSCKKDILMHRWRYPSLSL 320 (479)
T ss_dssp CCHHHHHHHHHTTSBCTTSCBCSTTTTTTSCCCCHHHHHHTSSCCCCHHHHHHHHTCSSCSCSSHHHHHHHHHTSCEEEE
T ss_pred cCHHHHHHHHHHhcCCCCCCEecCchhccCCCCCHHHHHHHHhCCCCHHHHHHhcCCccccccchHHHHHHhhcCCCeEE
Confidence 99999999888766432100 00 1468999
Q ss_pred EEEEcC----CcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhh--CCeEEEEeeccCCCCcc--cCCHHHH
Q 013442 272 AKFEGG----GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQ--RCNATVTFDDKSFYPVT--VNNKNLH 343 (443)
Q Consensus 272 ~~i~gG----~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~--~~~~~v~~~~~~~~~~~--~~d~~~~ 343 (443)
+.|+|| .+.|+||++|++.+++|+.|.++.+++.++|+++++..+..+ +..+++++ ...+|++ +.|++++
T Consensus 321 ~~i~gg~~g~~~~NvIP~~a~~~~~~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~p~~~~~~d~~~~ 398 (479)
T 2zog_A 321 HGIEGAFSGSGAKTVIPRKVVGKFSIRLVPDMIPEVVSEQVSSYLSKKFAELQSPNKFKVYM--GHGGKPWVSDFNHPHY 398 (479)
T ss_dssp EEEESSCCSSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTCCCSEEEEEE--EEEECCEECCTTSHHH
T ss_pred eeeecCCcCCCCccccCCceEEEEEEEeCCCCCHHHHHHHHHHHHHHhhhccCCCceEEEEe--cCCCCceecCCCCHHH
Confidence 999998 799999999999999999999999999999999999877654 55677766 3445664 4477899
Q ss_pred HHHHHHHHHhcCCcccccCCCCCCCchH-HHHHhh--cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHH
Q 013442 344 EHFQKVAADMLGVQNIKENRPLMGTEDF-SFFAEA--IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASL 420 (443)
Q Consensus 344 ~~~~~~~~~~~g~~~~~~~~~~~g~tDa-~~~~~~--ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~ 420 (443)
+.+++++++++|.++.. ...+|++|+ ++|.+. +|++++++|+ +. ..+|+|||+++++++.+++++|+.+
T Consensus 399 ~~~~~a~~~~~g~~~~~--~~~~gs~d~~~~~~~~~~~p~~~~g~g~-----~~-~~~H~~~E~i~~~~l~~~~~~~~~~ 470 (479)
T 2zog_A 399 QAGRRALKTVFGVEPDL--TREGGSIPVTLTFQEATGKNVMLLPVGS-----AD-DGAHSQNEKLNRLNYIEGTKMLAAY 470 (479)
T ss_dssp HHHHHHHHHHHSSCCEE--EEESSCCTHHHHHHHHHCSEEEECCCBC-----TT-CCTTSTTCEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcee--cCCCCccchHHHHHHHhCCCEEEecCCC-----Cc-cCCCCCCCcEeHHHHHHHHHHHHHH
Confidence 99999999988887643 245788997 577764 8877655663 33 3699999999999999999999999
Q ss_pred HHHHHhh
Q 013442 421 ATRYLLE 427 (443)
Q Consensus 421 ~~~l~~~ 427 (443)
+.+++..
T Consensus 471 ~~~~~~~ 477 (479)
T 2zog_A 471 LYEVSQL 477 (479)
T ss_dssp HHHHHHC
T ss_pred HHHHHhh
Confidence 9999863
No 15
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=100.00 E-value=1e-49 Score=396.00 Aligned_cols=333 Identities=15% Similarity=0.126 Sum_probs=272.3
Q ss_pred HHHHHHHHHHHhCCCCC--c---ccHHHHHHHHHHHHhCCCCeeecc---cCceEEEEECCCCCcEEEEEEecccccCcc
Q 013442 50 YWMVNIRRKIHENPELG--F---QEFETSKLIRAELDQMGIPYKFPV---AVTGVVGYIGTGQPPFVALRADMDALAMEE 121 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s--~---~E~~~~~~l~~~l~~~G~~~~~~~---~~~~via~~~~~~~~~I~~~~H~DtVp~~~ 121 (443)
+++++++++|++|||+| + +|.++++||.++|+ ||+++... +++|+++ ++++ |+|+|++|+||||+++
T Consensus 9 ~~~~~~l~~l~~ips~s~~~~~~~e~~~~~~l~~~l~--G~~~~~~~~~~~~~~~~a-~~g~--~~i~l~~H~D~vp~~~ 83 (369)
T 2f7v_A 9 ASTLEHLETLVSFDTRNPPRAIAAEGGIFDYLRAQLP--GFQVEVIDHGDGAVSLYA-VRGT--PKYLFNVHLDTVPDSP 83 (369)
T ss_dssp HHHHHHHHHHHHSCCBTTTTCCCSSSHHHHHHHTTCT--TCEEEEEECSTTCEEEEE-EESC--CSEEEEEECCBCCCCS
T ss_pred HHHHHHHHHHhCCCCcCCCCCCccHHHHHHHHHHHhC--CCceEEEEcCCCceEEEE-EcCC--CeEEEEeeecccCCCC
Confidence 88999999999999999 7 89999999999999 99987642 4689999 8654 7899999999999987
Q ss_pred cCCCc---cc-cCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCCc-c-chHHHHHHcCCCCccc
Q 013442 122 SVEWE---HK-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEG-G-GGAKKMLDAGALENVE 192 (443)
Q Consensus 122 ~~~w~---~~-~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEEg-~-~G~~~~~~~g~~~~~d 192 (443)
.|+ |. .++||+|||||+ |++++++|++++. ++++|+|+|++|||. + .|++++++++. ++|
T Consensus 84 --~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~-------~~~~v~~~~~~~EE~~g~~G~~~~~~~~~--~~d 152 (369)
T 2f7v_A 84 --HWSADPHVMRRTEDRVIGLGVCDIKGAAAALVAAANA-------GDGDAAFLFSSDEEANDPRCIAAFLARGL--PYD 152 (369)
T ss_dssp --SCSSCTTSCEECSSEEECTTTTTTHHHHHHHHHHHTT-------CCCCEEEEEESCTTSSSCCHHHHHHTTCC--CCS
T ss_pred --CCCCCCCCcEEECCEEEecccccccHHHHHHHHHHhc-------CCCCEEEEEEeCcccCCCcCHHHHHhcCC--CCC
Confidence 675 44 356899999998 8999999998875 779999999999995 4 89999998765 678
Q ss_pred eeeEecCCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCC-CCCcHHHHHHHHHHHHHHhhcccc----CCCCCc
Q 013442 193 AIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQ-HTIDPIVAASNVIVSLQHLVSREA----DPLDSQ 267 (443)
Q Consensus 193 ~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss~p~-~g~NAi~~~~~~i~~l~~~~~~~~----~~~~~~ 267 (443)
++++.++.. +.+ ..+++|..+++|+++|+++|+|.|+ .|.||+..+++++.+|+.+..+.. ++....
T Consensus 153 ~~i~~e~~~----~~i----~~~~~g~~~~~i~v~G~~~Ha~~p~~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~ 224 (369)
T 2f7v_A 153 AVLVAEPTM----SEA----VLAHRGISSVLMRFAGRAGHASGKQDPAASALHQAMRWGGKALDHVESLAHARFGGLTGL 224 (369)
T ss_dssp EEEECCCST----TCB----BCCBCCEEEEEEEEECCCC------CTTSCHHHHHHHHHHHHHHHHHHTTTCEETTEESC
T ss_pred EEEECCCCC----Ccc----eeecCceEEEEEEEeeeCcccCCCCcCCCCHHHHHHHHHHHHHhhhhhhcccccCcccCC
Confidence 888754321 222 3456899999999999999999999 999999999999999988754321 111116
Q ss_pred eEEEEEEEcCCcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeecc-CCCCcccCC-HHHHHH
Q 013442 268 VLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDK-SFYPVTVNN-KNLHEH 345 (443)
Q Consensus 268 t~~v~~i~gG~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~d-~~~~~~ 345 (443)
+++++.|+||.+.|+||++|++.+|+|++|..+.+++.++|+++++. .++++++++ . ..+|++..+ +++++.
T Consensus 225 ~~~vg~i~gG~~~NviP~~a~~~~diR~~~~~~~~~~~~~i~~~~~~----~~~~~~~~~--~~~~~~~~~~~~~~l~~~ 298 (369)
T 2f7v_A 225 RFNIGRVDGGIKANMIAPAAELRFGFRPLPSMDVDGLLATFAGFADP----AAAHFEETF--RGPSLPSGDIARAEERRL 298 (369)
T ss_dssp EEEEEEEEECSSTTSCCSEEEEEEEEECCTTCCHHHHHHHHHHTCSS----CCSEEEEEE--EECCBSCSSHHHHHHHHH
T ss_pred ceEEEEeecCCCCCcCCCceEEEEEEeeCCCCCHHHHHHHHHHHHHH----hcCceEEEe--ccCCCCccCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999988753 246677765 3 356777666 889999
Q ss_pred HHHHHHHhcCCcccccCCCCCCCchHHHHHhh-cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHH
Q 013442 346 FQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (443)
Q Consensus 346 ~~~~~~~~~g~~~~~~~~~~~g~tDa~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~ 422 (443)
+++++++.+|.++. ....|++|+++|.+. +|++ .+| ||....+|+|||+++++++.+++++|+.++.
T Consensus 299 ~~~a~~~~~g~~~~---~~~~g~~D~~~~~~~g~p~v--~~G-----pg~~~~~H~~~E~~~~~~l~~~~~~~~~~~~ 366 (369)
T 2f7v_A 299 AARDVADALDLPIG---NAVDFWTEASLFSAGGYTAL--VYG-----PGDIAQAHTADEFVTLAQLQRYVESVNRIIN 366 (369)
T ss_dssp HHHHHHHHTTCCBC---CCBSSCCTHHHHHHTTCCEE--ECC-----SSCGGGTTCTTCEEEHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCCC---ccccccCcHHHHhhCCCCEE--EEC-----CCCccccCCCCceEEHHHHHHHHHHHHHHHH
Confidence 99999998887663 347889999999988 9976 567 4445679999999999999999999998875
No 16
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=100.00 E-value=6.8e-50 Score=410.80 Aligned_cols=372 Identities=13% Similarity=0.094 Sum_probs=295.7
Q ss_pred chHHHHhhcCchhHH-HHHHHHHHHHhCCCCCccc---HHHHHHHHHHHHhCCCCeeec--ccCceEEEEECCC--CCcE
Q 013442 36 PVKFLDFAKKPEIFY-WMVNIRRKIHENPELGFQE---FETSKLIRAELDQMGIPYKFP--VAVTGVVGYIGTG--QPPF 107 (443)
Q Consensus 36 ~~~~~~~~~~~~~~~-~~i~ll~~l~~ipS~s~~E---~~~~~~l~~~l~~~G~~~~~~--~~~~~via~~~~~--~~~~ 107 (443)
.+++.+++++++ + ++++++++|++|||+|++| .++++||+++|+++|++++.. .+++|++++++++ ++|+
T Consensus 31 m~~~~~~~~~~~--~~~~~~~l~~l~~ips~s~~e~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~v~a~~~g~~~~~~~ 108 (481)
T 2pok_A 31 QEQIEKFEKDHV--AQHYFEVLRTLISKKSVFAQQVGLKEVANYLGEIFKRVGAEVEIDESYTAPFVMAHFKSSRPDAKT 108 (481)
T ss_dssp HHHHHHHHHCHH--HHHHHHHHHHHHHSCCCGGGCTTHHHHHHHHHHHHHHTTCEEEEECSSSSCEEEEEECCSSTTCCE
T ss_pred HHHHHHHHHhhh--hHHHHHHHHHHHcCCCcCCCCHHHHHHHHHHHHHHHHcCCEEEEecCCCCcEEEEEecCCCCCCCe
Confidence 467888899887 8 9999999999999999877 899999999999999998764 3468999999653 3589
Q ss_pred EEEEEecccccCcccCCCc---cc-cCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchH
Q 013442 108 VALRADMDALAMEESVEWE---HK-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGA 179 (443)
Q Consensus 108 I~~~~H~DtVp~~~~~~w~---~~-~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~ 179 (443)
|+|+|||||||+++.++|+ |. .++||++||||+ |++++++|+|+++|++.+..++++|.|+|+++|| |+.|+
T Consensus 109 i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~g~ 188 (481)
T 2pok_A 109 LIFYNHYDTVPADGDQVWTEDPFTLSVRNGFMYGRGVDDDKGHITARLSALRKYMQHHDDLPVNISFIMEGAEESASTDL 188 (481)
T ss_dssp EEEEEECCCCCSCSSCCCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTCSSCSSEEEEEEESCGGGTTTTH
T ss_pred EEEEEeccCcCCCCccccccCCCCceeeCCeEEccccccCcHHHHHHHHHHHHHHHhcCCCCCCEEEEEecccccCchhH
Confidence 9999999999999877895 44 356899999997 8999999999999998855889999999999999 66899
Q ss_pred HHHHHcCC--CCccceeeEecCCCCCCCceEEeecCcccccceEEEEEEEecC--CCCCCCCCCCcHHHHHHHHHHHHHH
Q 013442 180 KKMLDAGA--LENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKG--GHAAIPQHTIDPIVAASNVIVSLQH 255 (443)
Q Consensus 180 ~~~~~~g~--~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~--aHss~p~~g~NAi~~~~~~i~~l~~ 255 (443)
+.+++++. ++++|++++.++... ..+... ...+++|..+++|+++|++ +||+.|+.|.||+..+++++.+|++
T Consensus 189 ~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~~--i~~~~~G~~~~~i~v~G~~g~~Hss~p~~g~nAi~~~a~~i~~l~~ 265 (481)
T 2pok_A 189 DKYLEKHADKLRGADLLVWEQGTKN-ALEQLE--ISGGNKGIVTFDAKVKSADVDIHSSYGGVVESAPWYLLQALQSLRA 265 (481)
T ss_dssp HHHHHHHHHHHTTCSEEECSCCBBC-TTSCEE--EECCBCEEEEEEEEEECSSSCEEGGGTTTBCCHHHHHHHHHHHTBC
T ss_pred HHHHHHhHhhccCCCEEEECCCCcc-CCCCee--EEEecceeEEEEEEEecCCCCccccCCCCCCCHHHHHHHHHHHhhC
Confidence 88887642 333778776543211 112122 2345789999999999999 8999999999999999999999875
Q ss_pred hh-----------------------ccc--------------cCC-------------CCCceEEEEEEEcCC----cCc
Q 013442 256 LV-----------------------SRE--------------ADP-------------LDSQVLTVAKFEGGG----AFN 281 (443)
Q Consensus 256 ~~-----------------------~~~--------------~~~-------------~~~~t~~v~~i~gG~----~~n 281 (443)
.. .+. .++ ....++|++.|+||. +.|
T Consensus 266 ~~~~i~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~t~~vg~i~gG~~~~~~~N 345 (481)
T 2pok_A 266 ADGRILVEGLYEEVQEPNEREMALLETYGQRNPEEVSRIYGLELPLLQEERMAFLKRFFFDPALNIEGIQSGYQGQGVKT 345 (481)
T ss_dssp TTSCBCCTTTGGGSCCCCHHHHHHHHHHSCSCGGGHHHHHTCCSCCSSCSHHHHHHHHHHSCEEEEEEEEEECCSSSCCC
T ss_pred CCCceeccchhhcCCCCCHHHHHHHHhcCcccHHHHHHhhCcccccccccchhHHHHHhhcCeEeEEeeecCCCCCCCCe
Confidence 42 000 000 024699999999986 789
Q ss_pred cccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcc--cCCHHHHHHHHHHHHHhcCCccc
Q 013442 282 IIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVT--VNNKNLHEHFQKVAADMLGVQNI 359 (443)
Q Consensus 282 ~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~d~~~~~~~~~~~~~~~g~~~~ 359 (443)
+||++|++.+|+|++|..+.+.+.++|+++++..+. .++++++.. .+|++ +.|+++++.+.+++++.+|.+++
T Consensus 346 vIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~-~~~~v~~~~----~~p~~~~~~d~~l~~~~~~a~~~~~g~~~~ 420 (481)
T 2pok_A 346 ILPAEASAKLEVRLVPGLEPHDVLEKIRKQLDKNGF-DKVELYYTL----GEMSYRSDMSAPAILNVIELAKKFYPQGVS 420 (481)
T ss_dssp EECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHTTC-TTEEEEEEE----EECCBCCCSCSHHHHHHHHHHTTTCTTCEE
T ss_pred eccCeeEEEEEEEeCCCCCHHHHHHHHHHHHHhhCC-CceEEEEcc----CCCcccCCCCCHHHHHHHHHHHHHcCCCcc
Confidence 999999999999999999999999999999987543 455555432 34443 45788999999999998887663
Q ss_pred ccCCCCCCCchHHHHHhh--cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 013442 360 KENRPLMGTEDFSFFAEA--IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRY 424 (443)
Q Consensus 360 ~~~~~~~g~tDa~~~~~~--ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l 424 (443)
.. ...+|++|+++|.+. +|++. +|+... ...+|+|||+++++++.+++++|+.++.++
T Consensus 421 ~~-~~~gg~~D~~~~~~~~g~p~v~--~G~g~~----~~~~H~~~E~i~i~~l~~~~~~~~~~l~~l 480 (481)
T 2pok_A 421 VL-PTTAGTGPMHTVFDALEVPMVA--FGLGNA----NSRDHGGDENVRIADYYTHIELVEELIRSY 480 (481)
T ss_dssp EE-SCBSSCCTHHHHHHHHCCCEEB--CCSBCT----TCCTTSTTCEEEHHHHHHHHHHHHHHHHTT
T ss_pred cc-ccCCCCCchHHHHHHcCCCEEE--ecCCCc----ccCCCCCCCcEEHHHHHHHHHHHHHHHHhc
Confidence 22 344555599999875 88754 563321 256999999999999999999999988653
No 17
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=5.2e-50 Score=396.01 Aligned_cols=331 Identities=16% Similarity=0.132 Sum_probs=267.9
Q ss_pred HHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeecccCceEEEEECC-C-CCcEEEEEEecccccCcccCCCc-
Q 013442 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGT-G-QPPFVALRADMDALAMEESVEWE- 126 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~-~-~~~~I~~~~H~DtVp~~~~~~w~- 126 (443)
+++++++++|++|||+|++|.++++||.++|+++|++++.. ++|+++++++ . ++|+|+|++|+||||+++ +|+
T Consensus 11 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~g~~~~~~--~~nv~a~~~g~~~~~~~i~l~aH~D~vp~~~--~w~~ 86 (356)
T 3ct9_A 11 AEAVSLLKSLISIPSISREETQAADFLQNYIEAEGMQTGRK--GNNVWCLSPMFDLKKPTILLNSHIDTVKPVN--GWRK 86 (356)
T ss_dssp HHHHHHHHHHHTSCCBTTCCHHHHHHHHHHHHHTTCCEEEE--TTEEEEECSSCCTTSCEEEEEEECCBCCCC-------
T ss_pred HHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHCCCeEEEE--eeeEEEEEecCCCCCCeEEEEccccccCCCC--CCCC
Confidence 88999999999999999999999999999999999998875 7899999965 3 368999999999999987 575
Q ss_pred --cc-cCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCCc-c-chHHHHHHcCCCCccceeeEec
Q 013442 127 --HK-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEG-G-GGAKKMLDAGALENVEAIFGLH 198 (443)
Q Consensus 127 --~~-~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEEg-~-~G~~~~~~~g~~~~~d~~i~~~ 198 (443)
|. .++||++||||+ |++++++|+|+++|++.+ ++++|.|+|+++||+ + .|++++++++ .++|+++..+
T Consensus 87 ~p~~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~--~~~~v~~~~~~~EE~~g~~G~~~~~~~~--~~~d~~i~~e 162 (356)
T 3ct9_A 87 DPFTPREENGKLYGLGSNDAGASVVSLLQVFLQLCRTS--QNYNLIYLASCEEEVSGKEGIESVLPGL--PPVSFAIVGE 162 (356)
T ss_dssp --CCCEECSSEEESTTTTTTHHHHHHHHHHHHHHTTSC--CSSEEEEEEECCGGGTCTTTHHHHGGGS--CCCSEEEECC
T ss_pred CCCccEEECCEEEecCcccchHHHHHHHHHHHHHHhcC--CCCCEEEEEEeCcccCCccCHHHHHhhC--CCCCEEEEcC
Confidence 44 346899999998 689999999999999876 889999999999995 4 8999998876 3577666544
Q ss_pred CCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHHhhccccCC-CCCceEEEEEEEcC
Q 013442 199 VSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADP-LDSQVLTVAKFEGG 277 (443)
Q Consensus 199 ~~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~~~~~~~~~-~~~~t~~v~~i~gG 277 (443)
+.. +.+. .+++|..+++|+++|+++|++.| .|+||+..+++++.+|+.+..+..++ .+..+++++.|+||
T Consensus 163 p~~----~~i~----~~~~G~~~~~i~~~G~~~Ha~~p-~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~vg~i~gG 233 (356)
T 3ct9_A 163 PTE----MQPA----IAEKGLMVLDVTATGKAGHAARD-EGDNAIYKVLNDIAWFRDYRFEKESPLLGPVKMSVTVINAG 233 (356)
T ss_dssp SBT----TCCE----EEECCCEEEEEEEECBCCBTTSS-CCBCTTGGGHHHHHHHHHCCCSCCBTTTBSCEEEEEEEEEC
T ss_pred CCC----ceEE----EeeeEEEEEEEEEECCCcccCCC-CCCCHHHHHHHHHHHHHhhhcccccccCCCCcEEeeEEecC
Confidence 321 2221 23568999999999999999999 99999999999999998875443333 35679999999999
Q ss_pred CcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcc--cCCHHHHHHHHHHHHHhcC
Q 013442 278 GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVT--VNNKNLHEHFQKVAADMLG 355 (443)
Q Consensus 278 ~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~d~~~~~~~~~~~~~~~g 355 (443)
.+.|+||++|++.+|+|++|.++.+++.++|++.++. ++++++ ..+++. ++|+++++.+++++++
T Consensus 234 ~~~NviP~~a~~~~~iR~~~~~~~~~~~~~i~~~~~~-------~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~--- 300 (356)
T 3ct9_A 234 TQHNVVPDKCTFVVDIRSNELYSNEDLFAEIRKHIAC-------DAKARS---FRLNSSRIDEKHPFVQKAVKMGRI--- 300 (356)
T ss_dssp SSTTBCCSEEEEEEEEECCTTCCHHHHHHHHHHHCCS-------EEEESC---SCSCCEECCTTSHHHHHHHHTTCC---
T ss_pred CcCCcCCCceEEEEEEeeCCCCCHHHHHHHHHHHhhC-------eEEEee---ccCCCCCCCCCCHHHHHHHHHhcC---
Confidence 9999999999999999999999999999999988652 344321 345554 3567788877665431
Q ss_pred CcccccCCCCCCCchHHHHHhhcCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 013442 356 VQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYL 425 (443)
Q Consensus 356 ~~~~~~~~~~~g~tDa~~~~~~ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~ 425 (443)
+ ..++|++|++. ..+|++ .+| ||....+|+|||+++++++.+++++|+.++.+++
T Consensus 301 --~----~~~~g~tD~~~--~~~p~v--~~G-----~g~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~~~ 355 (356)
T 3ct9_A 301 --P----FGSPTLSDQAL--MSFASV--KIG-----PGRSSRSHTAEEYIMLKEIEEAIGIYLDLLDGLK 355 (356)
T ss_dssp --C----EEECSCCGGGG--CCSCEE--ECC-----SSBGGGTTSTTCEEEHHHHHHHHHHHHHHHTTCC
T ss_pred --C----cccccccchhh--cCCCEE--EEC-----CCccccCcCCCcEEEHHHHHHHHHHHHHHHHHhh
Confidence 1 13678999883 238975 467 4444579999999999999999999999987654
No 18
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=100.00 E-value=6.3e-49 Score=403.87 Aligned_cols=362 Identities=10% Similarity=0.055 Sum_probs=250.2
Q ss_pred chHHHHhhcCchhHHHHHHHHHHHHhCCCCCccc------------HHHHHHHHHHHHhCCCCeeecccCceEEEEECCC
Q 013442 36 PVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQE------------FETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG 103 (443)
Q Consensus 36 ~~~~~~~~~~~~~~~~~i~ll~~l~~ipS~s~~E------------~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~ 103 (443)
.+++.+++++++ +++++++++|++|||+|++| .++++||.++|+++||+++..+ +...+++++ .
T Consensus 22 ~~~i~~~i~~~~--~~~~~~l~~lv~ips~s~~e~~~~~~p~g~~~~~~~~~l~~~l~~~G~~~~~~~-~~~~~~~~g-~ 97 (492)
T 3khx_A 22 ASMWKEKVQQYE--DQIINDLKGLLAIESVRDDAKASEDAPVGPGPRKALDYMYEIAHRDGFTTHDVD-HIAGRIEAG-K 97 (492)
T ss_dssp -CTTHHHHHTTH--HHHHHHHHHHHTSCCCCCSSSCCSSSTTCHHHHHHHHHHHHHHHHTTCEEEEET-TTEEEEEEE-C
T ss_pred HHHHHHHHHHhH--HHHHHHHHHHhcCCCCCCCcccccccccchHHHHHHHHHHHHHHHcCCcceEeC-CEEEEEEeC-C
Confidence 356788888888 99999999999999999887 4899999999999999987643 222334333 3
Q ss_pred CCcEEEEEEecccccCcccCCCc---cc-cCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-c
Q 013442 104 QPPFVALRADMDALAMEESVEWE---HK-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-G 175 (443)
Q Consensus 104 ~~~~I~~~~H~DtVp~~~~~~w~---~~-~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g 175 (443)
.+|+|+|+||+||||+++ .|+ |. .++||+|||||+ |++++++|+|+++|++.+..++++|.|+|++||| +
T Consensus 98 ~~~~i~l~~H~D~vp~~~--~w~~~Pf~~~~~~g~l~GrG~~D~Kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g 175 (492)
T 3khx_A 98 GNDVLGILCHVDVVPAGD--GWDSNPFEPVVTEDAIIARGTLDDKGPTIAAYYAIKILEDMNVDWKKRIHMIIGTDEESD 175 (492)
T ss_dssp SSCEEEEEEECCCCCCCS--CCSSCTTSCEECSSEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEEECCTTCC
T ss_pred CCCEEEEEEeccCCCCCC--CcccCCCceEEECCEEEecCCccCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEECCccCC
Confidence 358999999999999976 685 44 467999999998 7999999999999999888899999999999999 6
Q ss_pred cchHHHHHHcCCCCccceeeEecCCCCCC------------------------------------------Cce--EEee
Q 013442 176 GGGAKKMLDAGALENVEAIFGLHVSSLFP------------------------------------------VGT--VASR 211 (443)
Q Consensus 176 ~~G~~~~~~~g~~~~~d~~i~~~~~~~~~------------------------------------------~g~--~~~~ 211 (443)
+.|+++++++.. .+|+.+. ++...| ... +...
T Consensus 176 ~~g~~~~~~~~~--~~~~~~~--~d~~~p~~~g~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~n~vpd~~~aiv~e 251 (492)
T 3khx_A 176 WKCTDRYFKTEE--MPTLGFA--PDAEFPCIHGEKGITTFDLVQNKLTEDQDEPDYELITFKSGERYNMVPDHAEARVLV 251 (492)
T ss_dssp CCTTSHHHHHSC--CCSEEEC--SSCSSCSCCCBCEEEEEEEEECCCCCCCCCCSEEEEEEEECSCTTSCCCEEEEEEEE
T ss_pred CcCHHHHHHhCc--CCCEEEe--cCCCccEEEecCcEEEEEEEEeccccccccccceeEEecccccCCcCCchHheEeec
Confidence 789999998753 2333332 111111 000 1111
Q ss_pred c---------------Ccccccce-----EEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHH------Hhhc---c---
Q 013442 212 P---------------GPTLAAGG-----FFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQ------HLVS---R--- 259 (443)
Q Consensus 212 ~---------------g~~~~g~~-----~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~------~~~~---~--- 259 (443)
+ ..+.+|.. +++|+++|+++|+|+|+.|+|||..+++++.+|. .+.. +
T Consensus 252 pt~~~~~~~~~~~~~~~~g~kG~~~~~~~~~~i~v~GkaaHas~P~~G~NAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~ 331 (492)
T 3khx_A 252 KENMTDVIQDFEYFLEQNHLQGDSTVDSGILVLTVEGKAVHGMDPSIGVNAGLYLLKFLASLNLDNNAQAFVAFSNRYLF 331 (492)
T ss_dssp CSCHHHHHHHHHHHHHHTTCEEEEEEETTEEEEEEECBCCCC------BCHHHHHHHHHTTSCBCHHHHHHHHHHHHHTT
T ss_pred ccchHHHHHHHHHHHhhcCceeEEEecCCeEEEEEEeEEcccCCCccCccHHHHHHHHHHhcCCCchHHHHHHHHHHhhC
Confidence 1 12236777 9999999999999999999999999999998876 2210 0
Q ss_pred ------------ccCCCCCceEEEEEEEcCCcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEe
Q 013442 260 ------------EADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTF 327 (443)
Q Consensus 260 ------------~~~~~~~~t~~v~~i~gG~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~ 327 (443)
.....+..++|++.|++|. |++|++.+|+|+++..+.+++.++|++.++ ..++++++..
T Consensus 332 ~~~~~~~l~i~~~d~~~G~~t~n~g~i~~g~-----P~~a~~~idiR~~~~~~~~~v~~~i~~~~~----~~g~~~~i~~ 402 (492)
T 3khx_A 332 NSDFGEKMGMKFHTDVMGDVTTNIGVITYDN-----ENAGLFGINLRYPEGFEFEKAMDRFANEIQ----QYGFEVKLGK 402 (492)
T ss_dssp TCTTSGGGTCC-------CCEEEEEEEEEET-----TTCCEEEEEEEECTTCCHHHHHHHHHHHHG----GGTEEEEEEE
T ss_pred CCCCccccCCccccCCcCccEEeeeEEEEec-----CCEEEEEEEeeCCCCCCHHHHHHHHHHHHH----HcCCEEEEec
Confidence 0112457899999999886 999999999999999999999999998875 3576776654
Q ss_pred eccCCCCcccCCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhhcCcEEEEecCCCCCCCCCCCCCCCCCCCCC
Q 013442 328 DDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNE 407 (443)
Q Consensus 328 ~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~~~~~ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i 407 (443)
.......+.|+++++.+++++++.+|.++ .+..++|++|++++.+.+| +|+.. ||+...+|+||||+++
T Consensus 403 --~~~p~~~~~d~~lv~~l~~a~~~~~G~~~--~~~~~gggtDa~~~~~~v~-----~G~~f--Pg~~~~~H~~dE~v~i 471 (492)
T 3khx_A 403 --VQPPHYVDKNDPFVQKLVTAYRNQTNDMT--EPYTIGGGTYARNLDKGVA-----FGAMF--SDSEDLMHQKNEYITK 471 (492)
T ss_dssp --EECCBCCGGGCHHHHHHHHHHHTTCC--------------------------------------------CCSCEEEH
T ss_pred --cCCceecCCCcHHHHHHHHHHHHHhCCCC--eEEeeehhHHHHHhhCceE-----ECCcC--CCCCCCCCCCccCcCH
Confidence 21211235678899999999999888876 3457889999999976443 34433 6666789999999999
Q ss_pred CchHHHHHHHHHHHHHHHhh
Q 013442 408 DALPYGAALHASLATRYLLE 427 (443)
Q Consensus 408 ~~l~~~~~~~a~~~~~l~~~ 427 (443)
+++.+++++|+.++.+++..
T Consensus 472 ~~l~~~~~i~~~~l~~l~~~ 491 (492)
T 3khx_A 472 KQLFNATSIYLEAIYSLCVE 491 (492)
T ss_dssp HHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999853
No 19
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=100.00 E-value=5e-49 Score=390.13 Aligned_cols=336 Identities=16% Similarity=0.096 Sum_probs=272.2
Q ss_pred HHHHHHHHHHHhCCCCC---cccHHHHHHHHHHHHhCCCCeeecccCceEEEEECC---CCCcEEEEEEecccccCcccC
Q 013442 50 YWMVNIRRKIHENPELG---FQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGT---GQPPFVALRADMDALAMEESV 123 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s---~~E~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~---~~~~~I~~~~H~DtVp~~~~~ 123 (443)
+++++++++|++|||+| ++|.++++||.++|+++|++++.. ..|+++.+.+ +++|+|+|++|+||||. .
T Consensus 6 ~~~~~~l~~l~~ips~s~~~~~e~~~~~~l~~~l~~~G~~~~~~--~~~~~~~~~~~~~~~~~~i~l~aH~D~vp~---~ 80 (364)
T 2rb7_A 6 QHIVELTSDLIRFPSMHSRPEQISRCAGFIMDWCAQNGIHAERM--DHDGIPSVMVLPEKGRAGLLLMAHIDVVDA---E 80 (364)
T ss_dssp HHHHHHHHHHHTSCCCTTCHHHHHHHHHHHHHHHHHTTCCCEEE--EETTEEEEEECSBTTEEEEEEEEECCCCCC---C
T ss_pred HHHHHHHHHHHcCCCCCCCcchHHHHHHHHHHHHHHcCCeEEEe--cCCCceEEEEEcCCCCCeEEEECccCcCCC---C
Confidence 77999999999999999 889999999999999999998764 3578888752 33589999999999986 2
Q ss_pred CCcccc-CCCCeeecCcc---hHHHHHHHHHHHHHHcccccC---Cce--EEEEEeccCC-cc-chHHHHHHcCCCCccc
Q 013442 124 EWEHKS-KVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEI---KGT--IVLVFQPAEE-GG-GGAKKMLDAGALENVE 192 (443)
Q Consensus 124 ~w~~~~-~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l---~~~--i~~i~~~dEE-g~-~G~~~~~~~g~~~~~d 192 (443)
..+|.. +++|++||||+ |++++++|+|+++|++.+..+ +++ |.|+|+++|| ++ .|++++++++ ++|
T Consensus 81 ~~p~~~~~~~g~~~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~~g~~~v~~~~~~~EE~~g~~G~~~~~~~~---~~d 157 (364)
T 2rb7_A 81 DDLFVPRVENDRLYGRGANDDKYAVALGLVMFRDRLNALKAAGRSQKDMALGLLITGDEEIGGMNGAAKALPLI---RAD 157 (364)
T ss_dssp GGGGSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEEESCGGGTSTTTHHHHGGGC---EEE
T ss_pred CCCCccEEECCEEEecccccccHHHHHHHHHHHHHHHhCCCCcccCCCccEEEEEEeccccCchhhHHHHHhcC---CCC
Confidence 456663 45899999998 689999999999999877666 568 9999999999 44 7999998875 455
Q ss_pred eeeEecCCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHHhhccccCCC--CCceEE
Q 013442 193 AIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPL--DSQVLT 270 (443)
Q Consensus 193 ~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~--~~~t~~ 270 (443)
+.+ +.++++|.+ +.+ +++|..+++|+++|+++|++.|+.|.||+..+++++.+|+++.. .+.. +..+++
T Consensus 158 ~~i--~~d~~~p~~-i~~----~~~G~~~~~i~v~G~~~Ha~~P~~g~nAi~~~~~~i~~l~~~~~--~~~~~~~~~~~~ 228 (364)
T 2rb7_A 158 YVV--ALDGGNPQQ-VIT----KEKGIIDIKLTCTGKAAHGARPWMGVNAVDLLMEDYTRLKTLFA--EENEDHWHRTVN 228 (364)
T ss_dssp EEE--ECSSSBTTE-EEE----EECEEEEEEEEEECBCEETTSGGGSBCHHHHHHHHHHHHHTTSC--CCCTTCCSCEEE
T ss_pred EEE--EccCCcccc-eEE----EeeeEEEEEEEEEeecccCCCCCCCcCHHHHHHHHHHHHHhhcc--chhhcCCCceEE
Confidence 554 455667777 433 35689999999999999999999999999999999999987632 1112 467999
Q ss_pred EEEEEcCCcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcccCCHHHHHHHHHHH
Q 013442 271 VAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVA 350 (443)
Q Consensus 271 v~~i~gG~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~ 350 (443)
++.|+||.+.|+||++|++.+|+|++|.++.+++.++|+++++. +++... ..++ ..+.|+++++.+++++
T Consensus 229 vg~i~gG~~~NviP~~a~~~~~iR~~~~~~~~~i~~~i~~~~~~-------~v~~~~--~~~~-~~~~~~~l~~~~~~~~ 298 (364)
T 2rb7_A 229 LGRIRAGESTNKVPDVAEGWFNIRVTEHDDPGALIDKIRKTVSG-------TVSIVR--TVPV-FLAADSPYTERLLALS 298 (364)
T ss_dssp EEEEEECSCTTEECSEEEEEEEEEECTTSCHHHHHHHHHHHCSS-------EEEEEE--EECC-EECCCCHHHHHHHHHH
T ss_pred EEEEecCCcCcccCcceEEEEEEeeCCCCCHHHHHHHHHHHhhh-------hEEecc--CCcc-ccCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999988752 344211 2222 2234668999998888
Q ss_pred HHhcCCcccccCCCCCCCchHHHHHhh-cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhh
Q 013442 351 ADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLLE 427 (443)
Q Consensus 351 ~~~~g~~~~~~~~~~~g~tDa~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~~~ 427 (443)
+ .+|. ...|++|+++|.+. +|++. +| ||.....|+|||+++++++.+++++|+.++.+++..
T Consensus 299 ~-~~g~-------~~~g~~D~~~~~~~~~p~v~--~G-----p~~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~~~~~ 361 (364)
T 2rb7_A 299 G-ATAG-------KAHGASDARYLGENGLTGVV--WG-----AEGFNTLHSRDECLHIPSLQSIYDPLMQLAREMEEH 361 (364)
T ss_dssp C-CEEE-------EESSCCGGGGTGGGTCCEEE--CC-----CCCTTCTTSTTCEEETTHHHHHHHHHHHHHHHHHC-
T ss_pred H-hcCC-------CCCCCchHHHHHhcCCCEEE--EC-----CCCccccCCCCccccHHHHHHHHHHHHHHHHHHHhh
Confidence 6 4453 15678999999884 89754 67 444412499999999999999999999999999853
No 20
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=100.00 E-value=6.5e-48 Score=390.95 Aligned_cols=346 Identities=15% Similarity=0.112 Sum_probs=279.9
Q ss_pred HHHHHHHHHHHhCCCCCc----------ccHHHHHHHHHHHHhCCCC-eeecccCceEEEEECCC---CCcEEEEEEecc
Q 013442 50 YWMVNIRRKIHENPELGF----------QEFETSKLIRAELDQMGIP-YKFPVAVTGVVGYIGTG---QPPFVALRADMD 115 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~----------~E~~~~~~l~~~l~~~G~~-~~~~~~~~~via~~~~~---~~~~I~~~~H~D 115 (443)
+++++++++|++|||+|+ +|.++++||.++|+++|++ ++.+ ...|+++++++. .+|+|+|+||+|
T Consensus 27 ~~~~~~l~~lv~i~s~s~~~~~~~~~~~~e~~~~~~l~~~l~~~G~~~~~~d-~~~nv~a~~~g~~~~~~~~v~l~~H~D 105 (434)
T 3ife_A 27 EELIERFTRYVKIDTQSNEDSHTVPTTPGQIEFGKLLVEELKEVGLTEVTMD-DNGYVMATLPANTDKDVPVIGFLAHLD 105 (434)
T ss_dssp HHHHHHHHHHHTSCCBCCTTCCSSSSSHHHHHHHHHHHHHHHHHTCEEEEEC-TTSCEEEEECCBSSSCCCCEEEEEECC
T ss_pred HHHHHHHHhhEEeeccCCCccCCCCCCHHHHHHHHHHHHHHHHcCCceEEEC-CCcEEEEEeCCCCCCCCCeEEEEEEcc
Confidence 789999999999999998 5689999999999999997 7764 467999999754 258999999999
Q ss_pred cccCcccCCCcccc----CC----------------------------CCeeecCcc-------hHHHHHHHHHHHHHHc
Q 013442 116 ALAMEESVEWEHKS----KV----------------------------PGKMHACGH-------DAHVAMLLGAAKMLQV 156 (443)
Q Consensus 116 tVp~~~~~~w~~~~----~~----------------------------~g~l~GrG~-------kg~~a~~l~a~~~l~~ 156 (443)
|||..+ +|+++. .. +|+|||||+ |++++++|+|+++|++
T Consensus 106 tVp~~~--~~~~~p~~~~~~dg~~i~l~~~~~~~~~~~~~~~~~~~~g~~~i~grG~t~~~~D~K~gva~~l~a~~~L~~ 183 (434)
T 3ife_A 106 TATDFT--GKNVKPQIHENFDGNAITLNEELNIVLTPEQFPELPSYKGHTIITTDGTTLLGADDKAGLTEIMVAMNYLIH 183 (434)
T ss_dssp BCTTSC--CSSCCCEEETTCCSSCEEEETTTTEEECTTTCTTGGGGTTSCEEECCSSSCCCHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCC--CCCCccEEeecCCCCceecccccccccChhhChhHHhhcCCcEEECCCccchhhhhHHHHHHHHHHHHHHHh
Confidence 999754 676541 11 259999995 8999999999999999
Q ss_pred ccccCCceEEEEEeccCCccchHHHHHHcCCCCccceeeEecCCCCCCCceEEeecCcccccceEEEEEEEecCCCCC-C
Q 013442 157 FRHEIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAA-I 235 (443)
Q Consensus 157 ~~~~l~~~i~~i~~~dEEg~~G~~~~~~~g~~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss-~ 235 (443)
.+..++++|.|+|++|||++.|++.+.... + ++|++++.|+. +.|.+.+ +.+|..+++|+++|+++||| .
T Consensus 184 ~~~~~~~~i~~if~~~EE~g~Ga~~~~~~~-~-~~d~~~~~d~~---~~g~i~~----~~~G~~~~~i~v~G~~~Hag~~ 254 (434)
T 3ife_A 184 NPQIKHGKIRVAFTPDEEIGRGPAHFDVEA-F-GASFAYMMDGG---PLGGLEY----ESFNAAGAKLTFNGTNTHPGTA 254 (434)
T ss_dssp CTTSCBCCEEEEEESCGGGTCTGGGCCHHH-H-CCSEEEECCCC---STTEEEC----CBCEEEEEEEEEECBCCCGGGC
T ss_pred CCCCCCCCEEEEEECCcccChHHHHhhhhh-c-CCCEEEEecCC---CCCceee----cCCCeEEEEEEEEEEecCCCCC
Confidence 887899999999999999558888764322 2 57888887742 3465543 35799999999999999988 8
Q ss_pred CCCCCcHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEcCCcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHH
Q 013442 236 PQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQ 315 (443)
Q Consensus 236 p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gG~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~ 315 (443)
|+.|+||+..+++++.+|+++.... ..+.+++.+++| ..|+||++|++.+++|+.|.++.+++.++|++++++.
T Consensus 255 P~~g~nAi~~aa~~i~~l~~~~~~~-----~~~~~~g~i~~g-~~n~iP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~ 328 (434)
T 3ife_A 255 KNKMRNATKLAMEFNGHLPVEEAPE-----YTEGYEGFYHLL-SLNGDVEQSKAYYIIRDFDRKNFEARKNTIENIVKQM 328 (434)
T ss_dssp TTTCBCHHHHHHHHHHTSCTTCSGG-----GCCTTCCEEEEE-EEEECSSEEEEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred cccchhHHHHHHHHHHhcccccCCC-----cceeeeEEEEee-eEeEecCeEEEEEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999987752111 112223344444 3789999999999999999999999999999999988
Q ss_pred HHhhC-CeEEEEeeccCCCC----cccCCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhh-cCcEEEEecCCC
Q 013442 316 ASVQR-CNATVTFDDKSFYP----VTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMND 389 (443)
Q Consensus 316 ~~~~~-~~~~v~~~~~~~~~----~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~~~~~-ip~~~~~~G~~~ 389 (443)
+..++ +++++++ ...++ +..+|+++++.+++++++ +|.++. ...++|++|+++|.+. +|+++ +|
T Consensus 329 ~~~~g~~~~~v~~--~~~~~~~~~~~~~d~~l~~~~~~a~~~-~G~~~~--~~~~~ggtD~~~~~~~GiP~~~--~g--- 398 (434)
T 3ife_A 329 QEKYGQDAVVLEM--NDQYYNMLEKIEPVREIVDIAYEAMKS-LNIEPN--IHPIRGGTDGSQLSYMGLPTPN--IF--- 398 (434)
T ss_dssp HHHHCGGGEEEEE--EEEECCTHHHHGGGTHHHHHHHHHHHH-TTCCCE--ECCBSSCCHHHHHHHTTCCCCE--EC---
T ss_pred HHhcCCceEEEEE--eecccchhccccCCHHHHHHHHHHHHH-hCCCCE--EeecccCchHHHHhhCCCcEEE--eC---
Confidence 87777 5566655 22333 357788999999999998 487653 3467899999999988 99875 44
Q ss_pred CCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 013442 390 ETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLL 426 (443)
Q Consensus 390 ~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~~ 426 (443)
||.. .+|+|||+++++++.+++++|+.++.++++
T Consensus 399 --~g~~-~~H~~~E~i~~~~l~~~~~~~~~~l~~la~ 432 (434)
T 3ife_A 399 --TGGE-NYHGKFEYVSVDVMEKAVQVIIEIARRFEE 432 (434)
T ss_dssp --CSEE-STTSTTCEEEHHHHHHHHHHHHHHHHHHHH
T ss_pred --CCCC-CCcCCceeecHHHHHHHHHHHHHHHHHHhh
Confidence 3322 699999999999999999999999999875
No 21
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=100.00 E-value=2.7e-46 Score=378.03 Aligned_cols=346 Identities=16% Similarity=0.146 Sum_probs=284.6
Q ss_pred HHHHHHHHHHHhCCCCC----------cccHHHHHHHHHHHHhCCCCeeecccCceEEEEECCC-CC-cEEEEEEecccc
Q 013442 50 YWMVNIRRKIHENPELG----------FQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG-QP-PFVALRADMDAL 117 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s----------~~E~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~-~~-~~I~~~~H~DtV 117 (443)
+++++++++|++|||+| ++|.++++||.++|+++|++++.+. ..|++++++++ ++ |+|+|++|||||
T Consensus 9 ~~~~~~l~~lv~i~s~s~~g~~~~~~s~~e~~~~~~i~~~l~~~G~~v~~~~-~gnv~a~~~g~~~~~~~i~l~~H~D~V 87 (423)
T 1z2l_A 9 QAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGLETRFDE-VGNLYGRLNGTEYPQEVVLSGSHIDTV 87 (423)
T ss_dssp HHHHHHHHHHHHTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHTTCEEEECT-TSCEEEEECCSSEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHhcCCCCCCCcccCcCCHHHHHHHHHHHHHHHHcCCEEEEec-CCcEEEEEcCCCCCCCEEEEEEecCCC
Confidence 78999999999999998 5789999999999999999987643 34999999654 33 899999999999
Q ss_pred cCcccCCCccccCCCCeeecCcchHHHHHHHHHHHHHHcccccCCceEEEEEeccCCcc------chHHHHHH----cC-
Q 013442 118 AMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGG------GGAKKMLD----AG- 186 (443)
Q Consensus 118 p~~~~~~w~~~~~~~g~l~GrG~kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEEg~------~G~~~~~~----~g- 186 (443)
|.+ +| . ..|++++++|+|+++|++.+..++++|+|+|+++||++ .|++.+.. ++
T Consensus 88 p~~---g~-----~-------D~k~g~a~~l~a~~~l~~~~~~~~~~v~~i~~~~EE~~~~~~g~~Gs~~~~~~~~~~~~ 152 (423)
T 1z2l_A 88 VNG---GN-----L-------DGQFGALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEGSRFPYVFWGSKNIFGLANPDDV 152 (423)
T ss_dssp TTB---CS-----S-------TTHHHHHHHHHHHHHHHHHHCSCSEEEEEEEESCSSCCSSSCSCHHHHHHTTCCCGGGT
T ss_pred CCC---Cc-----c-------CCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCccccccCCCcccHHHHHcCCCHHHH
Confidence 975 23 1 22789999999999999988889999999999999953 38888875 22
Q ss_pred -------------------CC---------CccceeeEecCCCCC---CCc-eEEeecCcccccceEEEEEEEecCCCCC
Q 013442 187 -------------------AL---------ENVEAIFGLHVSSLF---PVG-TVASRPGPTLAAGGFFEAVINGKGGHAA 234 (443)
Q Consensus 187 -------------------~~---------~~~d~~i~~~~~~~~---~~g-~~~~~~g~~~~g~~~~~v~v~G~~aHss 234 (443)
.+ +++|+++.+|..++. +++ ..... ..++|..+++|+++|+++|||
T Consensus 153 ~~~~~~d~~~~~~~~~~~G~~~~~~~p~~~~~~~~~~~~h~~~~~~~e~~~~~~~~~--~~~~g~~~~~i~v~G~~~Ha~ 230 (423)
T 1z2l_A 153 RNICDAKGNSFVDAMKACGFTLPNAPLTPRQDIKAFVELHIEQGCVLESNGQSIGVV--NAIVGQRRYTVTLNGESNHAG 230 (423)
T ss_dssp SSCCCSSSCCHHHHHHHTTCCCCSSCCCCCCCEEEEEEEEECCSSHHHHTTCCEEEE--EEECEEEEEEEEEECCCEETT
T ss_pred hhhcCcCCcCHHHHHHHcCCccccccccCCCCceEEEEEEeccCchHHHCCCCeEEE--eeEecceEEEEEEEeEcCCCC
Confidence 11 145677777765541 111 11111 235788999999999999999
Q ss_pred -CCC-CCCcHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEcC-CcCccccCcEEEEEEEecCChHHHHHHHHHHHHH
Q 013442 235 -IPQ-HTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGG-GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEV 311 (443)
Q Consensus 235 -~p~-~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gG-~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~ 311 (443)
.|+ .|.||+..+++++.+|+++..+. ++ ..+++++.|+|| .+.|+||++|++.+|+|++|.++.+++.++|++.
T Consensus 231 ~~P~~~g~nAi~~~a~~i~~l~~~~~~~-~~--~~~~~vg~i~gg~~~~NvIP~~a~~~~d~R~~~~~~~~~i~~~i~~~ 307 (423)
T 1z2l_A 231 TTPMGYRRDTVYAFSRICHQSVEKAKRM-GD--PLVLTFGKVEPRPNTVNVVPGKTTFTIDCRHTDAAVLRDFTQQLEND 307 (423)
T ss_dssp TSCGGGCCCHHHHHHHHHHHHHHHHHHH-CT--TCEEECCCEEEESCCTTEECCEEEEEEEEEESSHHHHHHHHHHHHHH
T ss_pred CCccccCcCHHHHHHHHHHHHHHHHHhc-CC--CceEEEEEEeecCCcceeECCEEEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 795 89999999999999998876442 22 468999999997 8999999999999999999999999999999999
Q ss_pred HHHHHHhhCCeEEEEeeccCCCCcccCCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhhcCcEEEEecCCCCC
Q 013442 312 VMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDET 391 (443)
Q Consensus 312 ~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~~~~~ip~~~~~~G~~~~~ 391 (443)
++..+...++.++++. ...+|++.+|+++++.++++++++ |.++. ...++|++|+++|.+.+|+++. +|
T Consensus 308 ~~~~~~~~g~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~-g~~~~--~~~~~ggtD~~~~~~~~p~~~~-~~----- 376 (423)
T 1z2l_A 308 MRAICDEMDIGIDIDL--WMDEEPVPMNKELVATLTELCERE-KLNYR--VMHSGAGHDAQIFAPRVPTCMI-FI----- 376 (423)
T ss_dssp HHHHHHHHTCEEEEEE--EEEECCEECCHHHHHHHHHHHHHT-TCCEE--EEEESSCCTHHHHTTTSCEEEE-EE-----
T ss_pred HHHHHHHhCCeEEEEE--ecCCCCccCCHHHHHHHHHHHHHc-CCCeE--EecCCCcccHHHHHhhCCEEEE-Ee-----
Confidence 9988877898888876 556778888999999999999998 87653 3467899999999888998654 45
Q ss_pred CCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhh
Q 013442 392 KGKFETGHSPYFRVNEDALPYGAALHASLATRYLLE 427 (443)
Q Consensus 392 pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~~~ 427 (443)
|+....+|+|||+++++++.+++++|+.++.+++..
T Consensus 377 p~~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~~ 412 (423)
T 1z2l_A 377 PSINGISHNPAERTNITDLAEGVKTLALMLYQLAWQ 412 (423)
T ss_dssp CCGGGCCSSTTCCCCHHHHHHHHHHHHHHHHHHHSC
T ss_pred CCCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHhh
Confidence 333346999999999999999999999999999864
No 22
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=100.00 E-value=1.6e-46 Score=378.97 Aligned_cols=346 Identities=14% Similarity=0.132 Sum_probs=281.8
Q ss_pred HHHHHHHHHHHhCCCCCc----------ccHHHHHHHHHHHHhCCCC-eeecccCceEEEEECCC---CCcEEEEEEecc
Q 013442 50 YWMVNIRRKIHENPELGF----------QEFETSKLIRAELDQMGIP-YKFPVAVTGVVGYIGTG---QPPFVALRADMD 115 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~----------~E~~~~~~l~~~l~~~G~~-~~~~~~~~~via~~~~~---~~~~I~~~~H~D 115 (443)
+++++++++|++|||+|+ +|.++++||.++|+++|++ ++.+ ..+|++++++++ ++|+|+|+||||
T Consensus 2 ~~~~~~l~~Lv~i~s~s~~~~~~~p~~~~e~~~~~~l~~~l~~~G~~~~~~~-~~~nvia~~~g~~~~~~~~i~l~aH~D 80 (417)
T 1fno_A 2 DKLLERFLHYVSLDTQSKSGVRQVPSTEGQWKLLRLLKQQLEEMGLVNITLS-EKGTLMATLPANVEGDIPAIGFISHVD 80 (417)
T ss_dssp CSHHHHHHHHHTSCCBCCSSCSSSSSSHHHHHHHHHHHHHHHHHTCEEEEEC-TTCCEEEEECCSSCSCCCCEEEEEECC
T ss_pred hHHHHHHHHhEEecCCCCcccCCCCCCccHHHHHHHHHHHHHHcCCCeEEEC-CCceEEEEECCCCCCCCCceEEEEecc
Confidence 347889999999999998 6889999999999999998 7654 467999999654 358999999999
Q ss_pred cccCcccCCCccc--------cC-----------------------CCCeeecCc-----c--hHHHHHHHHHHHHHHcc
Q 013442 116 ALAMEESVEWEHK--------SK-----------------------VPGKMHACG-----H--DAHVAMLLGAAKMLQVF 157 (443)
Q Consensus 116 tVp~~~~~~w~~~--------~~-----------------------~~g~l~GrG-----~--kg~~a~~l~a~~~l~~~ 157 (443)
|||.++ .|.++ .. .||+||||| + |++++++|+|+++|++.
T Consensus 81 ~Vp~~~--~~~~~p~~~~~~~g~~i~~~~g~~~~~~~~~~~~~~~~gd~~l~grGat~l~~D~K~g~a~~l~a~~~l~~~ 158 (417)
T 1fno_A 81 TSPDFS--GKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVLHQLLGQTLITTDGKTLLGADDKAGVAEIMTALAVLKGN 158 (417)
T ss_dssp BCTTSC--CSSCCCEEETTCCSSCEECSSSSCEECTTTCGGGGGCTTSCEEECCSSSCCCHHHHHHHHHHHHHHHHHHSS
T ss_pred ccCCCC--CCCCCceEEecCCCCeecccccccccchhhcchhhhhcCCcEEEcCCccccccccHHhHHHHHHHHHHHHhC
Confidence 999876 47532 11 356899999 5 69999999999999998
Q ss_pred cccCCceEEEEEeccCCccchHHHHHHcCCCCccceeeEecCCCCCCCceEEeecCcccccceEEEEEEEecCCCCC-CC
Q 013442 158 RHEIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAA-IP 236 (443)
Q Consensus 158 ~~~l~~~i~~i~~~dEEg~~G~~~~~~~g~~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss-~p 236 (443)
+ .++++|+|+|+++||.+.|++++++++. ++|+.+..++ . +.+.+. ...+|..+++|+++|+++|++ .|
T Consensus 159 ~-~~~~~v~~~~~~~EE~g~Ga~~~~~~~~--~~d~~i~~d~--~-~~g~i~----~~~~g~~~~~i~~~G~~~Hs~~~p 228 (417)
T 1fno_A 159 P-IPHGDIKVAFTPDEEVGKGAKHFDVEAF--GAQWAYTVDG--G-GVGELE----FENFNAASVNIKIVGNNVHPGTAK 228 (417)
T ss_dssp S-CCCCCEEEEEESCGGGTCTTTTCCHHHH--CCSEEEECCC--C-STTBEE----CCBCEEEEEEEEEECBCCCGGGCT
T ss_pred C-CCCCcEEEEEEeccccCCChhhhchhhc--CCCEEEEeCC--C-CcCeeE----EecCCceeEEEEEEeeccCCCCCc
Confidence 8 7889999999999994488887764432 4677776543 2 456653 345799999999999999999 79
Q ss_pred CCCCcHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEcCCcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHH
Q 013442 237 QHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQA 316 (443)
Q Consensus 237 ~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gG~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~ 316 (443)
+.|.||+..+++++.+|+.+..+........+++++.|+|| |++|++.+|+|+.|..+.+.+.++|+++++..+
T Consensus 229 ~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~v~~i~gG------p~~a~~~~d~R~~~~~~~~~~~~~i~~~~~~~~ 302 (417)
T 1fno_A 229 GVMVNALSLAARIHAEVPADEAPETTEGYEGFYHLASMKGT------VDRAEMHYIIRDFDRKQFEARKRKMMEIAKKVG 302 (417)
T ss_dssp TTCBCHHHHHHHHHHTSCTTSSGGGCCTTCCEEEEEEEEEC------SSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHT
T ss_pred cccCCHHHHHHHHHHhhhccCCcccccccccEEEEEEEeec------cCeEEEEEEEeCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998876543333334568999999998 999999999999999999999999999999877
Q ss_pred HhhCCe--EEEEeeccCCCCc----ccCCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhh-cCcEEEEecCCC
Q 013442 317 SVQRCN--ATVTFDDKSFYPV----TVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMND 389 (443)
Q Consensus 317 ~~~~~~--~~v~~~~~~~~~~----~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~~~~~-ip~~~~~~G~~~ 389 (443)
..++.. +++++ ...+++ .++|+++++.+++++++. |.++. ...+.|++|+++|... +|++. +|+
T Consensus 303 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~-g~~~~--~~~~~ggtD~~~~~~~gip~v~--~G~-- 373 (417)
T 1fno_A 303 KGLHPDCYIELVI--EDSYYNMREKVVEHPHILDIAQQAMRDC-HITPE--MKPIRGGTDGAQLSFMGLPCPN--LFT-- 373 (417)
T ss_dssp TTCCTTCCEEEEE--EEEECCCHHHHHTSTHHHHHHHHHHHHT-TCCCB--CCCBSSCCHHHHHTTTTCCCCE--ECC--
T ss_pred HHcCCCceEEEEE--eccccchhccccCCCHHHHHHHHHHHHc-CCCce--eccceeccchHhHHhcCCCEEE--EcC--
Confidence 666543 66655 223333 367889999999999995 88653 3567899999999887 99874 563
Q ss_pred CCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhh
Q 013442 390 ETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLLE 427 (443)
Q Consensus 390 ~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~~~ 427 (443)
|.. .+|+|||+++++++.+++++|+.++.+++..
T Consensus 374 ---~~~-~~H~~~E~i~~~~l~~~~~~~~~~~~~~~~~ 407 (417)
T 1fno_A 374 ---GGY-NYHGKHEFVTLEGMEKAVQVIVRIAELTAKR 407 (417)
T ss_dssp ---SEE-STTSTTCEEEHHHHHHHHHHHHHHHHHHHHT
T ss_pred ---CCC-CCCCcccccCHHHHHHHHHHHHHHHHHHHhc
Confidence 332 4899999999999999999999999999864
No 23
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=100.00 E-value=2.2e-45 Score=369.55 Aligned_cols=341 Identities=19% Similarity=0.192 Sum_probs=285.3
Q ss_pred HHHHHHHHHHHhCCCC----------CcccHHHHHHHHHHHHhCCCCeeecccCceEEEEECCC-C-CcEEEEEEecccc
Q 013442 50 YWMVNIRRKIHENPEL----------GFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG-Q-PPFVALRADMDAL 117 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~----------s~~E~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~-~-~~~I~~~~H~DtV 117 (443)
+++++++++|++|||. |++|.++++||.++|+++|++++.+. ..|++++++++ + +|+|+|.+|||||
T Consensus 5 ~~~~~~l~~l~~i~s~~~~g~~r~~~s~~e~~~~~~l~~~l~~~g~~~~~d~-~gnv~a~~~g~~~~~~~i~l~aH~D~v 83 (408)
T 3n5f_A 5 ERLWQRLMELGEVGKQPSGGVTRLSFTAEERRAKDLVASYMREAGLFVYEDA-AGNLIGRKEGTNPDATVVLVGSHLDSV 83 (408)
T ss_dssp HHHHHHHHHHHTTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHHTCEEEECT-TCCEEEEECCSSTTSCEEEEEEESCCC
T ss_pred HHHHHHHHHHHccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEEcC-CCCEEEEecCCCCCCCEEEEEecCCCC
Confidence 6789999999999993 78999999999999999999988754 34999999764 3 6999999999999
Q ss_pred cCcccCCCccccCCCCeeecCcchHHHHHHHHHHHHHHcccccCCceEEEEEeccCCc------cchHHHHHH-------
Q 013442 118 AMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEG------GGGAKKMLD------- 184 (443)
Q Consensus 118 p~~~~~~w~~~~~~~g~l~GrG~kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEEg------~~G~~~~~~------- 184 (443)
|.+. .| ..|++++++|++++.|++.+..++++|.|+|+++||+ ..|++.++.
T Consensus 84 ~~~g--~~-------------d~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~~~~~~g~~Gs~~~~~~~~~~~~ 148 (408)
T 3n5f_A 84 YNGG--CF-------------DGPLGVLAGVEVVQTMNEHGVVTHHPIEVVAFTDEEGARFRFGMIGSRAMAGTLPPEAL 148 (408)
T ss_dssp TTBC--SS-------------TTHHHHHHHHHHHHHHHHTTCCCSSCEEEEEESCSSCTTTTCCCHHHHHHHTCCCGGGG
T ss_pred CCCC--cc-------------CCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCccccccCCCCcCHHHHHcCCCHHHh
Confidence 9642 11 2367999999999999998888999999999999994 248988872
Q ss_pred ----------------cCC----C-----C--ccceeeEecCCCC-------CCCceEEeecCcccccceEEEEEEEecC
Q 013442 185 ----------------AGA----L-----E--NVEAIFGLHVSSL-------FPVGTVASRPGPTLAAGGFFEAVINGKG 230 (443)
Q Consensus 185 ----------------~g~----~-----~--~~d~~i~~~~~~~-------~~~g~~~~~~g~~~~g~~~~~v~v~G~~ 230 (443)
.|+ + + ++|+++.+|+.++ .+.+.+ .+++|..+++|+++|++
T Consensus 149 ~~~~~~G~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~lhi~~g~~le~~~~~~gi~-----~~~~g~~~~~i~v~G~~ 223 (408)
T 3n5f_A 149 ECRDAEGISLAEAMKQAGLDPDRLPQAARKPGTVKAYVELHIEQGRVLEETGLPVGIV-----TGIAGLIWVKFTIEGKA 223 (408)
T ss_dssp SCBCTTCCBHHHHHHHTTCCGGGGGGGCCCTTTEEEEEEEEECSSSHHHHHTCSEEEE-----EEECEEEEEEEEEECCC
T ss_pred hccCCCCCCHHHHHHHhCCChhhhhhcccCccCccEEEEEeeccchhHHHcCCCeEEE-----EEeccceEEEEEEEEEc
Confidence 222 1 2 5678888887654 122322 23579999999999999
Q ss_pred CCC-CCC-CCCCcHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEcC-CcCccccCcEEEEEEEecCChHHHHHHHHH
Q 013442 231 GHA-AIP-QHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGG-GAFNIIPDSVTIGGTFRAFSKESIIQLKQR 307 (443)
Q Consensus 231 aHs-s~p-~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gG-~~~n~vP~~a~~~~diR~~~~~~~~~v~~~ 307 (443)
+|+ +.| +.|+||+..+++++.+|+++. +..+ ..+++++.|+|| .+.|+||++|++.+|+|+.|.++.+++.++
T Consensus 224 ~Hags~P~~~g~nAi~~aa~~i~~l~~~~-~~~~---~~~~~vg~i~gG~~~~NvIP~~a~~~~diR~~~~~~~~~i~~~ 299 (408)
T 3n5f_A 224 EHAGATPMSLRRDPMAAAAQIIIVIEEEA-RRTG---TTVGTVGQLHVYPGGINVIPERVEFVLDLRDLKAEVRDQVWKA 299 (408)
T ss_dssp EETTTSCTTTCCCHHHHHHHHHHHHHHHH-HHHS---SCEEEEEEEEEESCCTTEECSEEEEEEEEEESSHHHHHHHHHH
T ss_pred CcCCCCccccccCHHHHHHHHHHHHHHHH-HhcC---CcEEEEEEEEecCCCCcCcCCeEEEEEEEeCCCHHHHHHHHHH
Confidence 999 589 589999999999999999876 3222 679999999997 899999999999999999999999999999
Q ss_pred HHHHHHHHHHhhCCeEEEEeeccCCCCcccCCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhhcCcEEEEecC
Q 013442 308 IEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGM 387 (443)
Q Consensus 308 i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~~~~~ip~~~~~~G~ 387 (443)
|+++++..+..+++++++++ ...+|++.+|+++++.++++++++ |.+.. ...+.|++|+++|.+.+|+++++.|.
T Consensus 300 i~~~~~~~a~~~g~~~~i~~--~~~~p~~~~d~~l~~~~~~a~~~~-g~~~~--~~~~~ggtD~~~~~~~iP~~~~~~~~ 374 (408)
T 3n5f_A 300 IAVRAETIAKERNVRVTTER--LQEMPPVLCSDEVKRAAEAACQKL-GYPSF--WLPSGAAHDSVQLAPICPIGMIFVRS 374 (408)
T ss_dssp HHHHHHHHHHHHTCEEEEEE--EEEECCEECCHHHHHHHHHHHHHH-TCCCC--EEEESSCCTTTTTTTTSCEEEEEECC
T ss_pred HHHHHHHHHHHhCCeEEEEE--ecCCCCcCCCHHHHHHHHHHHHHc-CCCcc--cCCCcCchHHHHHHHHCCEEEEEeCC
Confidence 99999988888899999887 567888888999999999999998 87653 23567899999998889987665553
Q ss_pred CCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 013442 388 NDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLL 426 (443)
Q Consensus 388 ~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~~ 426 (443)
. ...+|+|||+++++++..++++|+.++.++..
T Consensus 375 ~------~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~ 407 (408)
T 3n5f_A 375 Q------DGVSHSPAEWSTKEDCAAGAEVLYHTVWQLAQ 407 (408)
T ss_dssp G------GGCCSSTTCCCCHHHHHHHHHHHHHHHHHHTC
T ss_pred C------CCCCCCccccCCHHHHHHHHHHHHHHHHHHhc
Confidence 2 23599999999999999999999999998753
No 24
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=100.00 E-value=1.3e-46 Score=385.35 Aligned_cols=355 Identities=14% Similarity=0.072 Sum_probs=287.7
Q ss_pred HHHHHHHHHH-HhCCCCC-----------------cccHHHHHHHHHHHHhCCCCeeecccCceEEEEECCC-CCcEEEE
Q 013442 50 YWMVNIRRKI-HENPELG-----------------FQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG-QPPFVAL 110 (443)
Q Consensus 50 ~~~i~ll~~l-~~ipS~s-----------------~~E~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~-~~~~I~~ 110 (443)
+++++++++| ++|||+| ++|.++++||.++|+++||+++.+. ..|+++++++. ++|+|+|
T Consensus 32 ~~~~~~l~~L~v~i~s~s~~~~~~~~~g~~r~~~s~~e~~~~~~l~~~l~~~G~~v~~d~-~gnvia~~~g~~~~~~i~l 110 (474)
T 2v8h_A 32 GRLNQTILETGSQFGGVARWGQESHEFGMRRLAGTALDGAMRDWFTNECESLGCKVKVDK-IGNMFAVYPGKNGGKPTAT 110 (474)
T ss_dssp THHHHHHHHHHHHTTEECCCSSSTTCCEECCCTTSHHHHHHHHHHHHHHHHTTCEEEEBT-TCCEEEEECCSSCCSCEEE
T ss_pred HHHHHHHHHHhhhcCCccccccccccCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEEec-CceEEEEECCCCCCCeEEE
Confidence 7799999999 9999983 5789999999999999999988643 45899999654 4579999
Q ss_pred EEecccccCcccCCCccccCCCCeeecCcchHHHHHHHHHHHHHHcccccCCceEEEEEeccCCcc------chHHHHHH
Q 013442 111 RADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGG------GGAKKMLD 184 (443)
Q Consensus 111 ~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEEg~------~G~~~~~~ 184 (443)
+|||||||++ +| | ..|++++++|+|+++|++.+..++++|+|+|++|||++ .|++.+.+
T Consensus 111 ~~H~DtVp~~---g~----------~--D~k~gvaa~L~a~~~L~~~~~~~~~~v~lif~~dEE~~~~~~g~~Gs~~l~~ 175 (474)
T 2v8h_A 111 GSHLDTQPEA---GK----------Y--DGILGVLAGLEVLRTFKDNNYVPNYDVCVVVWFNAEGARFARSCTGSSVWSH 175 (474)
T ss_dssp EECCCCCSSB---CS----------S--TTHHHHHHHHHHHHHHHHHTCCCSSCEEEEECTTCSCSSSSCTTHHHHHHTT
T ss_pred EEecccCCCC---CC----------c--CCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEECCccCCCCCCCcccHHHHHh
Confidence 9999999986 35 1 34789999999999999988889999999999999952 38888854
Q ss_pred ---------------------------cCCC---------CccceeeEecCCCCCCCc----eEEeecCcccccceEEEE
Q 013442 185 ---------------------------AGAL---------ENVEAIFGLHVSSLFPVG----TVASRPGPTLAAGGFFEA 224 (443)
Q Consensus 185 ---------------------------~g~~---------~~~d~~i~~~~~~~~~~g----~~~~~~g~~~~g~~~~~v 224 (443)
.|+. +++++.+.+|..++...+ .... ..+.+|..+++|
T Consensus 176 ~~~~~~~~~~~d~~~~dg~~~~e~l~~~G~~~~~~~~~~~e~~~~~~~lHi~~g~~l~~~g~~~~i--~~~~~G~~~~~i 253 (474)
T 2v8h_A 176 DLSLEEAYGLMSVGEDKPESVYDSLKNIGYIGDTPASYKENEIDAHFELHIEQGPILEDENKAIGI--VTGVQAYNWQKV 253 (474)
T ss_dssp SSCHHHHHTCBCSSCSSCCBHHHHHHHHTCCCSBCSCTTTSCCSEEEEEEECCSSHHHHTTCSEEE--EEEECEEEEEEE
T ss_pred ccCHhhhhhhcccccccCccHHHHHHhcCCcccccccccccchhhheeeeeccCccccccCCccee--EEeecceEEEEE
Confidence 1221 245677777765442111 1111 123478899999
Q ss_pred EEEecCCCCC-CCC-CCCcHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEcC-CcCccccCcEEEEEEEecCChHHH
Q 013442 225 VINGKGGHAA-IPQ-HTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGG-GAFNIIPDSVTIGGTFRAFSKESI 301 (443)
Q Consensus 225 ~v~G~~aHss-~p~-~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gG-~~~n~vP~~a~~~~diR~~~~~~~ 301 (443)
+++|+++||| .|+ .|.||+..+++++.+|+.+..+. ..+++++.|+|| .+.|+||++|++.+|+|++|.++.
T Consensus 254 ~v~G~~~Hsg~~P~~~g~nAi~~~a~~i~~l~~~~~~~-----~~t~~vg~i~gG~~~~NvIP~~a~~~~diR~~~~~~~ 328 (474)
T 2v8h_A 254 TVHGVGAHAGTTPWRLRKDALLMSSKMIVAASEIAQRH-----NGLFTCGIIDAKPYSVNIIPGEVSFTLDFRHPSDDVL 328 (474)
T ss_dssp EEECCCEETTTCCGGGCCCHHHHHHHHHHHHHHHHHHT-----TCEEECCCEEEESCCTTEECSEEEEEEEEEESCHHHH
T ss_pred EEEeecCCCCCCCcccCCCHHHHHHHHHHHHHHHHhhc-----CCEEEEEEEEecCCCCceeCCEEEEEEEecCCChHHH
Confidence 9999999999 697 89999999999999998875442 569999999998 899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHh---hCCeEEEEeeccCCCCcccCCHHHHHHHHHHHHHhcC-C-cccccCCCCCCCchHHHHHh
Q 013442 302 IQLKQRIEEVVMKQASV---QRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLG-V-QNIKENRPLMGTEDFSFFAE 376 (443)
Q Consensus 302 ~~v~~~i~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g-~-~~~~~~~~~~g~tDa~~~~~ 376 (443)
+++.++|++.++..+.. .++.++++. ...+|++..|+++++.++++++++ | . ++. ...++|++|+++|.+
T Consensus 329 ~~i~~~i~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~d~~l~~~~~~a~~~~-G~~~~~~--~~~~~ggtD~~~~~~ 403 (474)
T 2v8h_A 329 ATMLKEAAAEFDRLIKINDGGALSYESET--LQVSPAVNFHEVCIECVSRSAFAQ-FKKDQVR--QIWSGAGHDSCQTAP 403 (474)
T ss_dssp HHHHHHHHHHHHHHTTCCTTCCCEEEEEE--EEEECCEECCHHHHHHHHHHHHHH-SCGGGEE--EEEESSCCTHHHHTT
T ss_pred HHHHHHHHHHHHHHHhhcccCCcEEEEEE--ecCCCCccCCHHHHHHHHHHHHHc-CCCCcce--ecCCcCCccHHHHHh
Confidence 99999999999887766 677787776 556777888999999999999998 8 6 543 346789999999988
Q ss_pred hcCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhhcCCCcccCCcc
Q 013442 377 AIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLLENQPKTTLASRS 438 (443)
Q Consensus 377 ~ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~~~~~~~~~~~~~~ 438 (443)
.+|+++. +| |+....+|+|||+++++++.+++++|+.++.+++.....+..+.|+.
T Consensus 404 ~~P~~~~-fg-----p~~~~~~H~p~E~i~~~~l~~~~~~~~~~l~~l~~~~~~~~~~~~~~ 459 (474)
T 2v8h_A 404 HVPTSMI-FI-----PSKDGLSHNYYEYSSPEEIENGFKVLLQAIINYDNYRVIRGHQFPGD 459 (474)
T ss_dssp TSCEEEE-EE-----CCGGGCCSSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--
T ss_pred hCCEEEE-Ee-----CCCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHhHHHhhccCCCC
Confidence 8997654 45 33335699999999999999999999999999997665555555543
No 25
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=100.00 E-value=4.3e-45 Score=375.59 Aligned_cols=346 Identities=16% Similarity=0.174 Sum_probs=272.3
Q ss_pred HHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeecccCceEEEEECCC----CCcEEEEEEecccccCcccC--
Q 013442 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG----QPPFVALRADMDALAMEESV-- 123 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~----~~~~I~~~~H~DtVp~~~~~-- 123 (443)
+++++++++|++|||+|++|.++++||.++|+++|++++.+. ..|+++++++. ++|+|+|+|||||||.++..
T Consensus 11 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~-~~nv~a~~~g~~g~~~~~~i~l~aH~D~vp~~~~~~~ 89 (487)
T 2qyv_A 11 KLLWQWFDQICAIPHPSYKEEQLAQFIINWAKTKGFFAERDE-VGNVLIRKPATVGMENRKPVVLQAHLDMVPQANEGTN 89 (487)
T ss_dssp HHHHHHHHHHHHSCCBTTCCHHHHHHHHHHHHHTTCEEEECT-TCCEEEEECCCTTCTTBCCEEEEEESCBCCC------
T ss_pred HHHHHHHHHHHcCCCCCCcHHHHHHHHHHHHHHcCCEEEEcC-CCcEEEEeCCCCCCCCCCeEEEEccCCccCCCCCCCc
Confidence 779999999999999999999999999999999999987643 46999999652 35899999999999998764
Q ss_pred -CCcc---c-cCCCCeeecCcc------hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchHHHHHHcCCCCcc
Q 013442 124 -EWEH---K-SKVPGKMHACGH------DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENV 191 (443)
Q Consensus 124 -~w~~---~-~~~~g~l~GrG~------kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~~~~~g~~~~~ 191 (443)
+|.. . .++||+|||||+ |++++++|++++ +.+ .++++|.|+|+++|| |+.|++.+++++ + .+
T Consensus 90 ~~w~~~p~~~~~~dg~l~g~G~~lgaD~k~g~a~~l~a~~---~~~-~~~~~v~~~~~~~EE~g~~Ga~~~~~~~-~-~~ 163 (487)
T 2qyv_A 90 HNFDQDPILPYIDGDWVKAKGTTLGADNGIGMASALAVLE---SND-IAHPELEVLLTMTEERGMEGAIGLRPNW-L-RS 163 (487)
T ss_dssp ----CCCCCEEECSSEEEETTBCCCHHHHHHHHHHHHHHH---CSS-SCCSSEEEEEESCTTTTCHHHHTCCSSC-C-CC
T ss_pred cccccCCeeEEeeCCEEEeCCCCcCCcCHHHHHHHHHHHH---hCC-CCCCCEEEEEEeccccCCHHHHHHHHhc-c-CC
Confidence 7853 3 456899999998 378899888875 333 477999999999999 668999987755 3 36
Q ss_pred ceeeEecCCCCCCCceEEe--ecC------------cccccceEEEEEEEe-cCCCCCCC-CCC-CcHHHHHHHHHHHHH
Q 013442 192 EAIFGLHVSSLFPVGTVAS--RPG------------PTLAAGGFFEAVING-KGGHAAIP-QHT-IDPIVAASNVIVSLQ 254 (443)
Q Consensus 192 d~~i~~~~~~~~~~g~~~~--~~g------------~~~~g~~~~~v~v~G-~~aHss~p-~~g-~NAi~~~~~~i~~l~ 254 (443)
|+++..++.+ .+.+.+ +.+ ..++| .+++|+++| +++|||.| +.| .||+..+++++.+|+
T Consensus 164 d~~~~~d~~~---~~~i~~g~~g~~~~~~~~~~~~~~~~~g-~~~~i~v~G~~~~Hsg~~~~~g~~nAi~~~~~~i~~l~ 239 (487)
T 2qyv_A 164 EILINTDTEE---NGEIYIGCAGGENADLELPIEYQVNNFE-HCYQVVLKGLRGGHSGVDIHTGRANAIKVLLRFLAELQ 239 (487)
T ss_dssp SEEEECCCCC---TTEEEEEECEEEEEEEEEECCEEECCCS-EEEEEEEECCCCCBTTTTTTSCCCCHHHHHHHHHHHHH
T ss_pred CEEEEEccCC---CCeEEEeccCCcceeeeccccccccCCC-eEEEEEEEccCCccCCcccccCCCCHHHHHHHHHHHHh
Confidence 7777654432 244322 111 13456 889999999 89999976 776 799999999999998
Q ss_pred HhhccccCCCCCceEEEEEEEcCCcCccccCcEEEEEEE----------------------------------------e
Q 013442 255 HLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTF----------------------------------------R 294 (443)
Q Consensus 255 ~~~~~~~~~~~~~t~~v~~i~gG~~~n~vP~~a~~~~di----------------------------------------R 294 (443)
.+. ...+++++.|+||...|+||++|++.+++ |
T Consensus 240 ~~~-------~~~~~~v~~i~gG~~~NvIP~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 312 (487)
T 2qyv_A 240 QNQ-------PHFDFTLANIRGGSIRNAIPRESVATLVFNGDITVLQSAVQKFADVIKAELALTEPNLIFTLEKVEKPQQ 312 (487)
T ss_dssp HHC-------TTCCEEEEEEEEESCTTBCCCCEEEEEEECSCHHHHHHHHHHHHHHHHHHTTTTCTTCEEEEEECCCCSE
T ss_pred hcc-------CCCcEEEEEEeCCCcCcccCCceEEEEEecCCHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecccccc
Confidence 862 13579999999999999999999999999 8
Q ss_pred cCChHHHHHHHHHHHHH---------------------------------------------------HHHHHHhhCCeE
Q 013442 295 AFSKESIIQLKQRIEEV---------------------------------------------------VMKQASVQRCNA 323 (443)
Q Consensus 295 ~~~~~~~~~v~~~i~~~---------------------------------------------------~~~~~~~~~~~~ 323 (443)
+.|.++.+.+.+.|+++ ++..+..+++++
T Consensus 313 ~~~~~~~~~i~~~i~~~~~gv~~~~~~~~~~~~~s~nl~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~g~~~ 392 (487)
T 2qyv_A 313 VFSSQCTKNIIHCLNVLPNGVVRNSDVIENVVETSLSIGVLKTEDNFVRSTMLVRSLIESGKSYVASLLKSLASLAQGNI 392 (487)
T ss_dssp EECHHHHHHHHHHHHHSCCEEEEECSSSTTCEEEEEEEEEEEECSSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHTCEE
T ss_pred ccCHHHHHHHHHHHHhCCCcceeeccccCCceEeccceEEEEEcCCeEEEEEEccCCCHHHHHHHHHHHHHHHHHcCceE
Confidence 99999888888887765 344556678777
Q ss_pred EEEeeccCCCCccc--CCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhhcCcE-EEEecCCCCCCCCCCCCCC
Q 013442 324 TVTFDDKSFYPVTV--NNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGY-FYYLGMNDETKGKFETGHS 400 (443)
Q Consensus 324 ~v~~~~~~~~~~~~--~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~~~~~ip~~-~~~~G~~~~~pG~~~~~H~ 400 (443)
++.. .+|++. .|+++++.+.+++++++|.++. .....|++|+++|.+.+|.+ ++.+|+ +. ..+|+
T Consensus 393 ~~~~----~~p~~~~~~d~~l~~~~~~~~~~~~G~~~~--~~~~~gg~D~~~~~~~~pg~~~v~~Gp-----~~-~~~H~ 460 (487)
T 2qyv_A 393 NLSG----DYPGWEPQSHSDILDLTKTIYAQVLGTDPE--IKVIHAGLECGLLKKIYPTIDMVSIGP-----TI-RNAHS 460 (487)
T ss_dssp EEEE----EECCBCCCSCCHHHHHHHHHHHHHHSSCCE--EEEESSCCTHHHHHHHCTTSEEEECCC-----CE-ESTTS
T ss_pred EECC----CCCCCCCCCCCHHHHHHHHHHHHHhCCCCe--EEEEeccccHHHHHhhCCCCCEEEECC-----CC-CCCCC
Confidence 6643 344443 5788999999999998798764 34678999999998876643 345774 32 46999
Q ss_pred CCCCCCCCchHHHHHHHHHHHHHHH
Q 013442 401 PYFRVNEDALPYGAALHASLATRYL 425 (443)
Q Consensus 401 p~E~i~i~~l~~~~~~~a~~~~~l~ 425 (443)
|||+++++++.+++++|+.++.+++
T Consensus 461 ~~E~v~~~~l~~~~~~~~~~l~~l~ 485 (487)
T 2qyv_A 461 PDEKVHIPAVETYWKVLTGILAHIP 485 (487)
T ss_dssp TTCEEEHHHHHHHHHHHHHHHHHCC
T ss_pred CCceeEHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999998875
No 26
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=100.00 E-value=9.9e-45 Score=372.29 Aligned_cols=344 Identities=16% Similarity=0.127 Sum_probs=266.1
Q ss_pred HHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeecccCceEEEEECCC----CCcEEEEEEecccccCcccC--
Q 013442 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG----QPPFVALRADMDALAMEESV-- 123 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~----~~~~I~~~~H~DtVp~~~~~-- 123 (443)
+++++++++|++|||+|++|.++++||.++|+++|++++.+ ...|+++++++. ++|+|+|+|||||||+++..
T Consensus 14 ~~~~~~~~~L~~ips~s~~e~~~~~~l~~~l~~~G~~v~~~-~~~nv~a~~~g~~g~~~~~~v~l~aH~D~vp~~~~~~~ 92 (490)
T 3mru_A 14 APLWQFFDKICSIPHPSKHEEALAQYIVTWATEQGFDVRRD-PTGNVFIKKPATPGMENKKGVVLQAHIDMVPQKNEDTD 92 (490)
T ss_dssp HHHHHHHHHHHHSCCBTTCCTTHHHHHHHHHHHTTCEEEEC-TTCCEEEEECCCTTCTTCCCEEEEEECCBCCCBCTTSC
T ss_pred HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCCEEEEc-CCCeEEEEEcCCCCCCCCCeEEEEeccCCCCCCCCCcc
Confidence 77999999999999999999999999999999999998874 356999999753 45899999999999998754
Q ss_pred -CCccc----cCCCCeeecCcc------hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchHHHHHHcCCCCcc
Q 013442 124 -EWEHK----SKVPGKMHACGH------DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENV 191 (443)
Q Consensus 124 -~w~~~----~~~~g~l~GrG~------kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~~~~~g~~~~~ 191 (443)
+|..+ .+++|++||||+ |++++++|+++ ++. ..++++|.|+|++||| |+.|++.+++... +.
T Consensus 93 ~~w~~~p~~~~~~~g~l~g~G~~lgaD~k~g~a~~l~~l---~~~-~~~~~~v~~~~~~~EE~g~~Ga~~~~~~~~--~~ 166 (490)
T 3mru_A 93 HDFTQDPIQPYIDGEWVTAKGTTLGADNGIGMASCLAVL---ASK-EIKHGPIEVLLTIDEEAGMTGAFGLEAGWL--KG 166 (490)
T ss_dssp CCTTTCCCCEEEETTEEEETTBCCCHHHHTTHHHHHHHH---HCS-SCCCCSEEEEEESCSSSTTGGGGTCCSSSC--CS
T ss_pred cccccCCceEEeeCCeEecCCCccCCCCHHHHHHHHHHH---HhC-CCCCCCEEEEEEcccccccHhHHHhhhccc--CC
Confidence 78643 467899999998 36778877764 333 3568999999999999 6689998876432 46
Q ss_pred ceeeEecCCCCCCCceE--Eee------------cCcccccceEEEEEEEe-cCCCCC-CCCCCC-cHHHHHHHHHHHHH
Q 013442 192 EAIFGLHVSSLFPVGTV--ASR------------PGPTLAAGGFFEAVING-KGGHAA-IPQHTI-DPIVAASNVIVSLQ 254 (443)
Q Consensus 192 d~~i~~~~~~~~~~g~~--~~~------------~g~~~~g~~~~~v~v~G-~~aHss-~p~~g~-NAi~~~~~~i~~l~ 254 (443)
++++.++.. +.|.+ ++. ....++|..+++|+++| +++||+ .|+.|+ ||+..+++++.+|+
T Consensus 167 ~~~~~~d~~---~~g~~~~g~~~g~~~~~~~~~~~~~~~~g~~~~~i~v~G~~~gHs~~~p~~g~~nai~~~~~~l~~l~ 243 (490)
T 3mru_A 167 DILLNTDSE---QEGEVYMGCAGGIDGAMTFDITRDAIPAGFITRQLTLKGLKGGHSGCDIHTGRGNANKLIGRFLAGHA 243 (490)
T ss_dssp SEEEECCCC---CTTCCEEEECEEEEEEEEEECCEECCCTTEEEEEEEEECCCCEETTTSSSSCCCCHHHHHHHHHHHHT
T ss_pred CEEEEcCCC---CCCeEEEecCCccceEEEeeeeeeccCCCceEEEEEEECCCCcccccccccCCcCHHHHHHHHHHHHH
Confidence 777765532 22221 110 02356799999999999 999999 599999 99999999999987
Q ss_pred HhhccccCCCCCceEEEEEEEcCCcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHH------------------
Q 013442 255 HLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQA------------------ 316 (443)
Q Consensus 255 ~~~~~~~~~~~~~t~~v~~i~gG~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~------------------ 316 (443)
+. .+++++.|+||.+.|+||++|++.+++|.......+++.+++.+.++...
T Consensus 244 ~~----------~~~~v~~i~gG~~~NvIP~~a~~~~~iR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 313 (490)
T 3mru_A 244 QE----------LDLRLVEFRGGSLRNAIPREAFVTVALPAENQDKLAELFNYYTELLKTELGKIETDIVTFNEEVATDA 313 (490)
T ss_dssp TT----------TTCEEEEEEECSCTTEECCCEEEEEEEEGGGHHHHHHHHHHHHHHHHHHHTTTCCCCEEEEEECCCCC
T ss_pred hc----------CcEEEEEEECCCCCcccCCccEEEEEECcccHHHHHHHHHHHHHHHHHHhhccCCCeEEEEEecCCcc
Confidence 52 36899999999999999999999988886655555555544444433222
Q ss_pred --------------------------------------------------------------------------HhhCCe
Q 013442 317 --------------------------------------------------------------------------SVQRCN 322 (443)
Q Consensus 317 --------------------------------------------------------------------------~~~~~~ 322 (443)
...|.+
T Consensus 314 ~~~~~~~~~~~i~~l~~~~~G~~~~~~~~~g~v~~S~n~gv~~~~~~~~~~~~~~R~~~~~~~~~i~~~l~~~~~~~g~~ 393 (490)
T 3mru_A 314 QVFAIADQQRFIAALNACPNGVMRMSDEVEGVVETSLNVGVITTEENKVTVLCLIRSLIDSGRSQVEGMLQSVAELAGAQ 393 (490)
T ss_dssp CEECHHHHHHHHHHHHHSCCEEEEECTTTTSCEEEEEEEEEEEEETTEEEEEEEEEESSHHHHHHHHHHHHHHHHHTTCE
T ss_pred ccCCHHHHHHHHHHHHHCCCccceeccccCCCeeEEEEEEEEEEeCCEEEEEEEcCCCCchHHHHHHHHHHHHHHHcCCe
Confidence 123444
Q ss_pred EEEEeeccCCCCcc--cCCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhhcCcE-EEEecCCCCCCCCCCCCC
Q 013442 323 ATVTFDDKSFYPVT--VNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGY-FYYLGMNDETKGKFETGH 399 (443)
Q Consensus 323 ~~v~~~~~~~~~~~--~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~~~~~ip~~-~~~~G~~~~~pG~~~~~H 399 (443)
+++. ..+|++ +.|+++++.+.+++++++|.++. ...++|++|++.|.+.+|.+ +..||+.. ..+|
T Consensus 394 ~~~~----~~~p~~~~~~d~~lv~~l~~a~~~~~G~~~~--~~~~ggg~d~~~~~~~~p~~~~v~fGp~~------~~~H 461 (490)
T 3mru_A 394 IEFS----GAYPGWKPDADSEIMAIFRDMYEGIYGHKPN--IMVIHAGLECGLFKEPYPNMDMVSFGPTI------KFPH 461 (490)
T ss_dssp EEEE----EEECCBCCCTTCHHHHHHHHHHHTTSSSCCC--CEEESSCCHHHHTTSSCTTCEEEECCCCE------ESTT
T ss_pred EEec----CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCe--EEEEEecHHHHHHHHhCCCCCEEEECCCC------CCCC
Confidence 4443 234554 45678999999999999998763 34789999999998887752 34578543 2499
Q ss_pred CCCCCCCCCchHHHHHHHHHHHHHHH
Q 013442 400 SPYFRVNEDALPYGAALHASLATRYL 425 (443)
Q Consensus 400 ~p~E~i~i~~l~~~~~~~a~~~~~l~ 425 (443)
+|||+++++++.+++++|..++.++.
T Consensus 462 ~p~E~v~i~~l~~~~~~l~~~l~~l~ 487 (490)
T 3mru_A 462 SPDEKVKIDTVQLFWDQMVALLEAIP 487 (490)
T ss_dssp STTCEEEHHHHHHHHHHHHHHHHHCC
T ss_pred CCCccccHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999988764
No 27
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=2.2e-44 Score=368.89 Aligned_cols=358 Identities=15% Similarity=0.093 Sum_probs=274.9
Q ss_pred HHHhhcCchhHHHHHHHHHHHHhCCCCCccc------------HHHHHHHHHHHHhCCCCeeecccCceEEEEECCCCCc
Q 013442 39 FLDFAKKPEIFYWMVNIRRKIHENPELGFQE------------FETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPP 106 (443)
Q Consensus 39 ~~~~~~~~~~~~~~i~ll~~l~~ipS~s~~E------------~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~~~~ 106 (443)
+.+++++++ +++++++++|++|||+|++| .++++||.++|+++||+++.. +..+++++++ ..+|
T Consensus 5 ~~~~~~~~~--~~~~~~l~~l~~ips~s~~~~~~~~~p~~~~~~~~~~~l~~~l~~~G~~~~~~-~~~~~~~~~g-~~~~ 80 (470)
T 1lfw_A 5 FKELAEAKK--DAILKDLEELIAIDSSEDLENATEEYPVGKGPVDAMTKFLSFAKRDGFDTENF-ANYAGRVNFG-AGDK 80 (470)
T ss_dssp HHHHHHTTH--HHHHHHHHHHHTSCCBCCGGGCCSSSTTCHHHHHHHHHHHHHHHHTTCEEEEE-TTTEEEEEEC-CCSS
T ss_pred HHHHHHHhH--HHHHHHHHHHcCCCCcCCCccccccCCCcHHHHHHHHHHHHHHHHcCCeEEEe-cCeEEEEEeC-CCCC
Confidence 567777777 99999999999999999876 689999999999999998764 3467888884 3358
Q ss_pred EEEEEEecccccCcccCCCc---ccc-C-CCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccc
Q 013442 107 FVALRADMDALAMEESVEWE---HKS-K-VPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGG 177 (443)
Q Consensus 107 ~I~~~~H~DtVp~~~~~~w~---~~~-~-~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~ 177 (443)
+|+|+|||||||+++ +|+ |.. + +||+|||||+ |++++++|+|+++|++.+..++++|+|+|+++|| ++.
T Consensus 81 ~i~l~~H~D~vp~~~--~w~~~Pf~~~~~~~g~l~grG~~D~K~~~a~~l~a~~~l~~~~~~~~~~i~~i~~~~EE~g~~ 158 (470)
T 1lfw_A 81 RLGIIGHMDVVPAGE--GWTRDPFKMEIDEEGRIYGRGSADDKGPSLTAYYGMLLLKEAGFKPKKKIDFVLGTNEETNWV 158 (470)
T ss_dssp EEEEEEECCBCCCCS--CCSSCTTSCEECTTCEEESTTSSSSHHHHHHHHHHHHHHHHHTCCCSSEEEEEEESCTTTTCH
T ss_pred eEEEEEeecccCCCC--CccCCCcceeEeeCCEEECCCcccChHHHHHHHHHHHHHHHcCCCCCCCEEEEEecCcccCCc
Confidence 999999999999986 684 543 4 7999999996 7999999999999999888899999999999999 668
Q ss_pred hHHHHHHcCCCCc----cce----eeEec--------CCCCCC-Cce---EEeecCc-----------------------
Q 013442 178 GAKKMLDAGALEN----VEA----IFGLH--------VSSLFP-VGT---VASRPGP----------------------- 214 (443)
Q Consensus 178 G~~~~~~~g~~~~----~d~----~i~~~--------~~~~~~-~g~---~~~~~g~----------------------- 214 (443)
|++.+++++.... .|. +++.+ ..+ .+ .|. .....|.
T Consensus 159 G~~~~~~~~~~~~~~~~~D~~~~~~~ge~g~~~~~l~~~~-~~~~g~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~ 237 (470)
T 1lfw_A 159 GIDYYLKHEPTPDIVFSPDAEYPIINGEQGIFTLEFSFKN-DDTKGDYVLDKFKAGIATNVTPQVTRATISGPDLEAVKL 237 (470)
T ss_dssp HHHHHHHHSCCCSEEEESSEESSEEEEECEEEEEEEEECC-CCCCCSBEEEEEEECSBTTBCCSEEEEEEECSCHHHHHH
T ss_pred cHHHHHHhCcCCcEEEEeCCCceEEEeccceEEEEEEEcc-CCcCCCcceeeeecCCcCCcccccceEEecccchHHHHH
Confidence 9999998754321 222 22211 000 00 000 0000000
Q ss_pred ---------ccccce-----EEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHH------Hhh---ccc-----------
Q 013442 215 ---------TLAAGG-----FFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQ------HLV---SRE----------- 260 (443)
Q Consensus 215 ---------~~~g~~-----~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~------~~~---~~~----------- 260 (443)
+.+|.. +++|+++|+++|++.|+.|+||+..+++++..|+ ++. .+.
T Consensus 238 ~~~~~~~~~~~~G~~~~~~~~~~i~v~G~~~Ha~~P~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~ 317 (470)
T 1lfw_A 238 AYESFLADKELDGSFEINDESADIVLIGQGAHASAPQVGKNSATFLALFLDQYAFAGRDKNFLHFLAEVEHEDFYGKKLG 317 (470)
T ss_dssp HHHHHHHHHTCEEEEEEETTEEEEEEECBCCBTTCGGGSBCHHHHHHHHHTTSCBCHHHHHHHHHHHHTTTTCTTSTTTT
T ss_pred HHHHHhhhhccccceeecCCcEEEEEeecccCCCCCccCccHHHHHHHHHHhCCCcchhHHHHHHHHHhcCCCCcccccC
Confidence 123543 8999999999999999999999999999998875 221 111
Q ss_pred ---cC-CCCCceEEEEEEEcCCcCccccCc-EEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCc
Q 013442 261 ---AD-PLDSQVLTVAKFEGGGAFNIIPDS-VTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPV 335 (443)
Q Consensus 261 ---~~-~~~~~t~~v~~i~gG~~~n~vP~~-a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~ 335 (443)
.+ ..+..++|++.|++ +|++ |++.+|+|++|..+.+.+.++|+++++. + +++++ ...+|+
T Consensus 318 ~~~~~~~~~~~t~~~g~i~~------~p~~~a~~~~diR~~~~~~~~~i~~~i~~~~~~-----g--~~v~~--~~~~~~ 382 (470)
T 1lfw_A 318 IFHHDDLMGDLASSPSMFDY------EHAGKASLLNNVRYPQGTDPDTMIKQVLDKFSG-----I--LDVTY--NGFEEP 382 (470)
T ss_dssp CCCEETTTEECEEEEEEEEE------ETTSCEEEEEEEEECTTCCHHHHHHHHHHHHTT-----T--EEEEC--SCCBCC
T ss_pred CcccccccccceEEEEEEEE------cCCceEEEEEEEecCCCCCHHHHHHHHHHHhcC-----C--eEEEE--EeCCCc
Confidence 00 12346888888765 6999 9999999999999999999999998753 4 44554 455666
Q ss_pred cc--CCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhhcCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHH
Q 013442 336 TV--NNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYG 413 (443)
Q Consensus 336 ~~--~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~~~~~ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~ 413 (443)
+. .|+++++.+.+++++++|.++. ...++|++|++++. |++ .+|+.. ||+...+|+|||+++++++.++
T Consensus 383 ~~~~~d~~l~~~~~~a~~~~~g~~~~--~~~~~g~~d~~~~~---~~v--~~G~~~--pg~~~~~H~~~E~i~~~~l~~~ 453 (470)
T 1lfw_A 383 HYVPGSDPMVQTLLKVYEKQTGKPGH--EVVIGGGTYGRLFE---RGV--AFGAQP--ENGPMVMHAANEFMMLDDLILS 453 (470)
T ss_dssp EECCTTCHHHHHHHHHHHHHHCCCCC--EEEESSCCGGGGST---TCE--ECCEEC--TTCCCCTTSTTCEEEHHHHHHH
T ss_pred eeeCCCCHHHHHHHHHHHHHcCCCCc--eeeecCHhHHHhCC---CeE--EECCCC--CCCCCCCCCCCcceEHHHHHHH
Confidence 53 5788999999999997797653 23567899999885 554 356544 5556779999999999999999
Q ss_pred HHHHHHHHHHHHhh
Q 013442 414 AALHASLATRYLLE 427 (443)
Q Consensus 414 ~~~~a~~~~~l~~~ 427 (443)
+++|+.++.+++..
T Consensus 454 ~~~~~~~~~~l~~~ 467 (470)
T 1lfw_A 454 IAIYAEAIYELTKD 467 (470)
T ss_dssp HHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999999864
No 28
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=100.00 E-value=1.4e-33 Score=267.42 Aligned_cols=248 Identities=16% Similarity=0.147 Sum_probs=192.0
Q ss_pred HHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeec--ccCceEEEEECCCCCcEEEEEEecccccCcccCCCc-
Q 013442 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFP--VAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWE- 126 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~--~~~~~via~~~~~~~~~I~~~~H~DtVp~~~~~~w~- 126 (443)
+++++++++|++|||+|++|.++++||.++|+++|++++.. ..++|++++++ .++|+|+|+||+||||+++...|+
T Consensus 6 ~~~~~~l~~lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~g-~~~~~i~l~~H~D~vp~~~~~~w~~ 84 (268)
T 3t68_A 6 SPVLALAKELISRQSVTPADAGCQDLMIERLKALGFEIESMVFEDTTNFWARRG-TQSPLFVFAGHTDVVPAGPLSQWHT 84 (268)
T ss_dssp CHHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHHTTCEECCCEETTEEC-CEEEC-SSSCEEEEEEECCBCCCCCGGGCSS
T ss_pred HHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHCCCeEEEEecCCccEEEEEeC-CCCCeEEEEccccccCCCCcccCCC
Confidence 67899999999999999999999999999999999988753 34679999994 346899999999999999888895
Q ss_pred --cc-cCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-cc-chHHHHHHcC--CCCccceeeE
Q 013442 127 --HK-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG-GGAKKMLDAG--ALENVEAIFG 196 (443)
Q Consensus 127 --~~-~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~-~G~~~~~~~g--~~~~~d~~i~ 196 (443)
|. .+++|++||||+ |++++++++|+++|++.+..++++|.|+|+++|| ++ .|++.+++.. ...++|++++
T Consensus 85 ~pf~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~~d~~i~ 164 (268)
T 3t68_A 85 PPFEPTVIDGFLHGRGAADMKGSLACMIVAVERFIAEHPDHQGSIGFLITSDEEGPFINGTVRVVETLMARNELIDMCIV 164 (268)
T ss_dssp CTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCTTSSSCCHHHHHHHHHHHTTCCCCEEEE
T ss_pred CCCccEEECCEEEecCcccchHHHHHHHHHHHHHHHhCCCCCCcEEEEEEeCCccCcccCHHHHHHHHHhcCCCCCEEEE
Confidence 44 577999999998 7999999999999998877889999999999999 55 4999988742 2236788887
Q ss_pred ecCCCCCCCc-eEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEE
Q 013442 197 LHVSSLFPVG-TVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFE 275 (443)
Q Consensus 197 ~~~~~~~~~g-~~~~~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~ 275 (443)
.++......+ .+. .+.+|.
T Consensus 165 ~ept~~~~~~~~i~----~g~~G~-------------------------------------------------------- 184 (268)
T 3t68_A 165 GEPSSTLAVGDVVK----NGRRGG-------------------------------------------------------- 184 (268)
T ss_dssp CSCCBSSSTTSEEE----ECCGGG--------------------------------------------------------
T ss_pred eCCCCCccCCceeE----EecCCC--------------------------------------------------------
Confidence 6543221111 110 011222
Q ss_pred cCCcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcccCCHHHHHHHHHHHHHhcC
Q 013442 276 GGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLG 355 (443)
Q Consensus 276 gG~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g 355 (443)
|...+++++++.+.+++++..|
T Consensus 185 ----------------------------------------------------------p~~~~~~~l~~~l~~a~~~~~g 206 (268)
T 3t68_A 185 ----------------------------------------------------------GFLTDTGELLAAVVAAVEEVNH 206 (268)
T ss_dssp ----------------------------------------------------------GTSCCCCHHHHHHHHHHHHHHS
T ss_pred ----------------------------------------------------------cccCCchHHHHHHHHHHHHHhC
Confidence 1112234689999999888558
Q ss_pred CcccccCCCCCCCchHHHHHhh-cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 013442 356 VQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLL 426 (443)
Q Consensus 356 ~~~~~~~~~~~g~tDa~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~~ 426 (443)
.++.. ..++|++|++++.+. +|++. +|+.. ...|+|+|+++++++.++++++..++.++++
T Consensus 207 i~~~~--~~sgggtD~~~~~~~g~p~~~--~~~~~------~~~Hs~~E~v~~~d~~~~~~vl~~~l~~l~~ 268 (268)
T 3t68_A 207 QAPAL--LTTGGTSDGRFIAQMGAQVVE--LGPVN------ATIHKVNECVRIADLEKLTDMYQKTLNHLLG 268 (268)
T ss_dssp SCCEE--ESSCCCHHHHHHHHHTCEEEE--CCSBC------TTTTSTTCEEEHHHHHHHHHHHHHHHHHHHC
T ss_pred CCcEE--ecCccccHHHHHHhcCCCEEE--EeeCC------CCCCCccccccHHHHHHHHHHHHHHHHHHhC
Confidence 87643 356789999999987 55443 55433 2379999999999999999999999999874
No 29
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=100.00 E-value=3.9e-32 Score=257.55 Aligned_cols=249 Identities=17% Similarity=0.211 Sum_probs=188.5
Q ss_pred HHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeec--ccCceEEEEECCCCCcEEEEEEecccccCcccCCCc-
Q 013442 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFP--VAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWE- 126 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~--~~~~~via~~~~~~~~~I~~~~H~DtVp~~~~~~w~- 126 (443)
+++++++++|++|||+|++|.++++||.++|+++||+++.. ..++|++++++ .++|+|+|+||+||||+++...|+
T Consensus 6 ~~~~~~l~~lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~g-~~~~~i~l~~H~D~vp~~~~~~w~~ 84 (269)
T 4h2k_A 6 EKVVSLAQDLIRRPSISPNDEGCQQIIAERLEKLGFQIEWMPFNDTLNLWAKHG-TSEPVIAFAGHTDVVPTGDENQWSS 84 (269)
T ss_dssp HHHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHTTTCEEEECCBTTBCEEEEEEC-SSSCEEEEEEECCBCCCCCGGGCSS
T ss_pred HHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHcCCeEEEEEcCCceEEEEEeC-CCCCEEEEEeeecccCCCCcccccC
Confidence 78999999999999999999999999999999999998763 35689999994 346899999999999999888896
Q ss_pred --cc-cCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-cc-chHHHHHHcC--CCCccceeeE
Q 013442 127 --HK-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG-GGAKKMLDAG--ALENVEAIFG 196 (443)
Q Consensus 127 --~~-~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~-~G~~~~~~~g--~~~~~d~~i~ 196 (443)
|. .+++|++||||+ |++++++++|+++|++.+..++++|.|+|+++|| ++ .|++.+++.. ...++|++++
T Consensus 85 ~pf~~~~~~g~~~grG~~D~k~g~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~~d~~i~ 164 (269)
T 4h2k_A 85 PPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEEATAKDGTIHVVETLMARDEKITYCMV 164 (269)
T ss_dssp CTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSSCCTTSHHHHHHHHHHTTCCCCEEEE
T ss_pred CCCCeEEECCEEEeCCcccChHHHHHHHHHHHHHHHhCCCCCccEEEEEEeccccCcccCHHHHHHHHHhcCCCCCEEEE
Confidence 43 567899999998 7999999999999998877889999999999999 44 3999987642 1235788887
Q ss_pred ecCCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEc
Q 013442 197 LHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEG 276 (443)
Q Consensus 197 ~~~~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~g 276 (443)
.++......+.. +.. +.+|.
T Consensus 165 ~Ept~~~~~~~~-i~~--g~~G~--------------------------------------------------------- 184 (269)
T 4h2k_A 165 GEPSSAKNLGDV-VKN--GRRGG--------------------------------------------------------- 184 (269)
T ss_dssp CCCCBSSSTTSE-EEC--SCTTC---------------------------------------------------------
T ss_pred ECCCCCCcCCce-eEE--ecccc---------------------------------------------------------
Confidence 654322111110 010 11121
Q ss_pred CCcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcccCCHHHHHHHHHHHHHhcCC
Q 013442 277 GGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGV 356 (443)
Q Consensus 277 G~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~ 356 (443)
| + ...++.+++.+.+++++..|.
T Consensus 185 -------------------------------------------G------~--------~~~~~~l~~~l~~aa~~~~gi 207 (269)
T 4h2k_A 185 -------------------------------------------G------F--------LTKPGKLLDSITSAIEETIGI 207 (269)
T ss_dssp -------------------------------------------C--------------------HHHHHHHHHHHHHHSC
T ss_pred -------------------------------------------c------c--------cCCCcHHHHHHHHHHHHHhCC
Confidence 0 0 011346888888888874488
Q ss_pred cccccCCCCCCCchHHHHHhh-cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 013442 357 QNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLL 426 (443)
Q Consensus 357 ~~~~~~~~~~g~tDa~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~~ 426 (443)
++.. ..++|++|++++.+. +|++. +|+.. ...|+|+|+++++++.+++++|..++.+++.
T Consensus 208 ~~~~--~~~gggtDa~~~~~~g~p~~~--~~~~~------~~~Hs~~E~v~~~d~~~~~~ll~~~l~~l~~ 268 (269)
T 4h2k_A 208 TPKA--ETGGGTSDGRFIALMGAEVVE--FGPLN------STIHKVNECVSVEDLGKCGEIYHKMLVNLLD 268 (269)
T ss_dssp CCEE--ECC--CHHHHHHHTTTCEEEE--CCSBC------TTTTSTTCEEEHHHHHHHHHHHHHHHHHHC-
T ss_pred CCEE--ecCCCCchHHHHHhhCCCEEE--EEeCC------CCCcCCcccccHHHHHHHHHHHHHHHHHHhh
Confidence 7643 356789999999877 56544 55433 3479999999999999999999999998874
No 30
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=99.93 E-value=5e-26 Score=205.50 Aligned_cols=170 Identities=15% Similarity=0.114 Sum_probs=134.1
Q ss_pred HHHHHHHHHHHhCCCCCc--ccHHHHHHHHHHHHhCCCCeeecc---cCceEEEEECCC-C-CcEEEEEEecccccCccc
Q 013442 50 YWMVNIRRKIHENPELGF--QEFETSKLIRAELDQMGIPYKFPV---AVTGVVGYIGTG-Q-PPFVALRADMDALAMEES 122 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~--~E~~~~~~l~~~l~~~G~~~~~~~---~~~~via~~~~~-~-~~~I~~~~H~DtVp~~~~ 122 (443)
+++++++++|++|||+|+ +|.++++|++++|+++|++++... +++|+++++++. + +|+|+|+||+||||+++
T Consensus 10 ~~~~~~l~~lv~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~~~g~~~~i~~~~g~~~~~~~ill~aH~DtVp~~~- 88 (198)
T 1q7l_A 10 HPSVTLFRQYLRIRTVQPKPDYGAAVAFFEETARQLGLGCQKVEVAPGYVVTVLTWPGTNPTLSSILLNSHTDVVPVFK- 88 (198)
T ss_dssp CHHHHHHHHHHTSCCBTTSCCHHHHHHHHHHHHHHHTCEEEEEEEETTEEEEEEEECCSSTTSCEEEEEEECCBCCCCG-
T ss_pred HHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHHHHCCCeEEEEEcCCCCeEEEEEEccCCCCCCeEEEEeeecccCCCc-
Confidence 568999999999999998 688999999999999999987642 567999999654 3 48999999999999976
Q ss_pred CCCc---cc-cC-CCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-c-cchHHHHHHcCCCC--c
Q 013442 123 VEWE---HK-SK-VPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-G-GGGAKKMLDAGALE--N 190 (443)
Q Consensus 123 ~~w~---~~-~~-~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g-~~G~~~~~~~g~~~--~ 190 (443)
..|. |. .+ .||++||||+ |++++++|+|+++|++.+..++++|.|+|+++|| | ..|++++++++.+. +
T Consensus 89 ~~w~~~pf~~~~~~~g~l~GrGa~D~K~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~ 168 (198)
T 1q7l_A 89 EHWSHDPFEAFKDSEGYIYARGAQDMKCVSIQYLEAVRRLKVEGHRFPRTIHMTFVPDEEVGGHQGMELFVQRPEFHALR 168 (198)
T ss_dssp GGCSSCTTTCCBCTTSEEECTTTTTTHHHHHHHHHHHHHHHHTTCCCSSCEEEEEESCGGGTSTTTHHHHTTSHHHHTTC
T ss_pred ccCccCCCeeeEccCCEEEeCcchhchHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcccccCccccHHHHHHhHHhccCC
Confidence 3685 43 22 5899999996 7999999999999999888899999999999999 5 38999998754322 3
Q ss_pred cceeeEecCCCCCCCceEEeecCcccccceEEEE
Q 013442 191 VEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEA 224 (443)
Q Consensus 191 ~d~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~v 224 (443)
+|+++ +....+|++...+. .+++|..|++|
T Consensus 169 ~~~~i--d~g~~ept~~~~v~--~~~kG~~~~~v 198 (198)
T 1q7l_A 169 AGFAL--DEGIANPTDAFTVF--YSERSPWWVRV 198 (198)
T ss_dssp EEEEE--ECCCCCSSSSEEEE--ECCSSCGGGCC
T ss_pred cCEEE--ecCccCCCCCceEE--EEccEEEEEEC
Confidence 45555 22335677643222 35678877653
No 31
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.93 E-value=9e-26 Score=221.03 Aligned_cols=248 Identities=13% Similarity=0.074 Sum_probs=165.2
Q ss_pred HHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeecccCceEEEEECCC-CCcEEEEEEecccccCc-------------
Q 013442 55 IRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG-QPPFVALRADMDALAME------------- 120 (443)
Q Consensus 55 ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~-~~~~I~~~~H~DtVp~~------------- 120 (443)
++++|+++||+|++|.++++||.++|+++|++++.+. ..|+++++.+. .+|+|+|.||+|+||.-
T Consensus 3 ~l~~L~~~~s~sg~e~~~~~~l~~~l~~~g~~~~~d~-~gnlia~~~g~~~~~~v~l~aH~D~v~~~v~~i~~~G~l~~~ 81 (340)
T 2fvg_A 3 YLKELSMMPGVSGDEGKVRDFIKSKIEGLVDNLYTDV-LGNLIALKRGRDSSKKLLVSAHMDEVGFVVSKIEKDGKVSFL 81 (340)
T ss_dssp CHHHHHHSCCBTTCCHHHHHHHHHHHGGGSSEEEECT-TSCEEEEECCSEEEEEEEEEEECCBCEEEEEEECTTSCEEEE
T ss_pred HHHHHHcCCCCCCchHHHHHHHHHHHHhhCCEEEEeC-CCcEEEEecCCCCCceEEEEeccCcCcEEEEEECCCCEEEEE
Confidence 5899999999999999999999999999999988754 45899998654 34899999999999830
Q ss_pred ccCCCccc---c------------------------------------------------CC-C-------------Cee
Q 013442 121 ESVEWEHK---S------------------------------------------------KV-P-------------GKM 135 (443)
Q Consensus 121 ~~~~w~~~---~------------------------------------------------~~-~-------------g~l 135 (443)
...+|..+ . +. + |++
T Consensus 82 ~~Gg~~~~~~~~~~v~v~~~~g~i~~~~~h~~~~~~~~~~~~~~l~id~g~~s~~e~~~~i~~gd~v~~~~~~~~~~~~i 161 (340)
T 2fvg_A 82 PVGGVDPRILPGKVVQVKNLKGVIGYRPIHLQRDEENTPPRFENLRIDFGFSSADEAKKYVSIGDYVSFVSDYIEKNGRA 161 (340)
T ss_dssp EESCCCGGGCTTCEEEETTEEEEEEECC-----------CCSTTEEEECSCSSHHHHHTTCCTTCEEEECCCCEEETTEE
T ss_pred eeCCcccccccCCEEEECcEEEEEcCCCccccchhhccCCCcccEEEEeCCCCHHHHHhhCCCCCEEEEccCceeecCEE
Confidence 01246432 1 22 4 899
Q ss_pred ecCcc--hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchHHHHHHcCCCCccceeeEecCCCCCCCceEEeec
Q 013442 136 HACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRP 212 (443)
Q Consensus 136 ~GrG~--kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~~~~~g~~~~~d~~i~~~~~~~~~~g~~~~~~ 212 (443)
|||.. |+++++++.|++.|+ .++++|.|+|+++|| |+.|++++.+. ...|++++.++. .
T Consensus 162 ~gra~D~k~g~a~~l~a~~~l~----~~~~~i~~~~~~~EE~G~~G~~~~~~~---~~~~~~i~~d~~-----~------ 223 (340)
T 2fvg_A 162 VGKAFDDRAGCSVLIDVLESGV----SPAYDTYFVFTVQEETGLRGSAVVVEQ---LKPTCAIVVETT-----T------ 223 (340)
T ss_dssp EESCHHHHHHHHHHHHHHHTCC----CCSEEEEEEEECCCC-----CHHHHHH---HCCSEEEEEEEE-----E------
T ss_pred eeccCccHHHHHHHHHHHHHhh----ccCCcEEEEEEcccccchhhhHHHhhc---cCCCEEEEEecc-----c------
Confidence 99944 799999999999886 478999999999999 77899988763 235666654320 0
Q ss_pred CcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEcCCcCccccCcEEEEEE
Q 013442 213 GPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGT 292 (443)
Q Consensus 213 g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gG~~~n~vP~~a~~~~d 292 (443)
.+ ++.|+++|++.|+.|.|++..+ .+ .+..
T Consensus 224 ----~~------~~~G~~~h~~~~~~G~g~~i~~--------------~~-------------~~~~------------- 253 (340)
T 2fvg_A 224 ----AG------DNPELEERKWATHLGDGPAITF--------------YH-------------RGYV------------- 253 (340)
T ss_dssp ----EC------SCSTTCCSSSSCCTTSCCEECS--------------CC-------------SSSC-------------
T ss_pred ----CC------CCCCCccccCCcccCCCcEEEE--------------eC-------------CCCC-------------
Confidence 01 4678889999999999965110 00 0000
Q ss_pred EecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcccCCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHH
Q 013442 293 FRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFS 372 (443)
Q Consensus 293 iR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~ 372 (443)
.++.+.+.+++++++. |.+.... ....++||++
T Consensus 254 ---------------------------------------------~~~~l~~~l~~~a~~~-gi~~~~~-~~~~ggtDa~ 286 (340)
T 2fvg_A 254 ---------------------------------------------IPKEIFQTIVDTAKNN-DIPFQMK-RRTAGGTDAG 286 (340)
T ss_dssp ---------------------------------------------CCHHHHHHHHHHHHHT-TCCCEEC-CCC-------
T ss_pred ---------------------------------------------CCHHHHHHHHHHHHHc-CCCeEEE-ecCCCCccHH
Confidence 0111333333333333 4443211 1356889999
Q ss_pred HHHh--h-cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 013442 373 FFAE--A-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLL 426 (443)
Q Consensus 373 ~~~~--~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~~ 426 (443)
.|.. . +|+++++.|. .. +|+|+|+++++++.+++++|+.++.+++.
T Consensus 287 ~~~~~~~GiP~v~~g~~~-------~~-~Hs~~E~v~~~dl~~~~~ll~~~~~~l~~ 335 (340)
T 2fvg_A 287 RYARTAYGVPAGVISTPA-------RY-IHSPNSIIDLNDYENTKKLIKVLVEEGKI 335 (340)
T ss_dssp ------CCSCEEEEEEEE-------EE-SSTTCEEEEHHHHHHHHHHHHHHHHHCHH
T ss_pred HHHhhCCCCcEEEecccc-------cc-cCChhhcccHHHHHHHHHHHHHHHHhccc
Confidence 9875 4 9988766442 22 99999999999999999999999998875
No 32
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=99.91 E-value=2.9e-23 Score=205.70 Aligned_cols=256 Identities=13% Similarity=0.126 Sum_probs=182.3
Q ss_pred HHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeecccCceEEEEECCC-CCcEEEEEEecccccC---------
Q 013442 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG-QPPFVALRADMDALAM--------- 119 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~-~~~~I~~~~H~DtVp~--------- 119 (443)
+++++++++|+++||+|++|.++++||.++|+++|++++.+ ...|++|++.+. .+|+|+|.||+||||.
T Consensus 7 ~~~~~~l~~L~~~~s~sg~e~~~~~~l~~~l~~~g~~~~~d-~~gnlia~~~g~~~~~~vll~aH~D~v~~~v~~i~~~G 85 (373)
T 1vhe_A 7 DETLTMLKDLTDAKGIPGNEREVRQVMKSYIEPFADEVTTD-RLGSLIAKKTGAENGPKIMIAGHLDEVGFMVTQITDKG 85 (373)
T ss_dssp CHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHGGGCSEEEEC-TTCCEEEEEESSTTSCEEEEEEECCCCEEEEEEECTTS
T ss_pred HHHHHHHHHHHcCCCCCCchHHHHHHHHHHHHhhCCEEEEc-CCCcEEEEecCCCCCceEEEEecCCcCCEEEEEECCCC
Confidence 56899999999999999999999999999999999998865 356899988654 4589999999999982
Q ss_pred -------cc---------------cC-------CCccc---c-----------------------------C--------
Q 013442 120 -------EE---------------SV-------EWEHK---S-----------------------------K-------- 130 (443)
Q Consensus 120 -------~~---------------~~-------~w~~~---~-----------------------------~-------- 130 (443)
|. .+ .|..+ . +
T Consensus 86 ~l~~~~~Gg~~~~~~~~~~v~v~~~~g~~~g~i~~~~~h~~~~~~~~~~~~~~~l~id~g~~s~~~~~~~gi~~Gd~v~~ 165 (373)
T 1vhe_A 86 FIRFQTVGGWWAQVMLAQRVTIVTKKGEITGVIGSKPPHILSPEARKKSVEIKDMFIDIGASSREEALEWGVLPGDMIVP 165 (373)
T ss_dssp CEEEEEESCCCGGGTTTCEEEEEETTEEEEEEEECCCGGGSCTTTTTSCCCGGGCEEECSCSSHHHHHHTTCCTTCEEEE
T ss_pred eEEEEEeCCcchhhccCCEEEEEeCCCcEEEEEcCCCcccCchhhccCCCChhHeEEEecCCCHHHHHHcCCCCCCEEEE
Confidence 10 00 13200 0 1
Q ss_pred --------CCCeeecCcc--hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchHHHHHHcCCCCccceeeEecC
Q 013442 131 --------VPGKMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHV 199 (443)
Q Consensus 131 --------~~g~l~GrG~--kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~~~~~g~~~~~d~~i~~~~ 199 (443)
++|++|||+. |+++++++.|++.|++.+ ++++|.|+|+++|| |+.|++.+... ..+|++++.++
T Consensus 166 ~~~~~~~~~~~~i~gr~~D~k~g~a~~l~a~~~l~~~~--~~~~v~~~~~~~EE~G~~G~~~~~~~---~~~d~~i~~d~ 240 (373)
T 1vhe_A 166 HFEFTVMNNEKFLLAKAWDNRIGCAIAIDVLRNLQNTD--HPNIVYGVGTVQEEVGLRGAKTAAHT---IQPDIAFGVDV 240 (373)
T ss_dssp CCCCEECSSTTEEEETTHHHHHHHHHHHHHHHHHHTSC--CSSEEEEEEESCCTTTSHHHHHHHHH---HCCSEEEEEEE
T ss_pred ccccEEecCCCeEEeccCccHHHHHHHHHHHHHHhhcC--CCceEEEEEECCcccChhhHHHHhcc---cCCCEEEEEec
Confidence 2689999976 799999999999998764 67999999999999 77899888542 13566665442
Q ss_pred CCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEcCCc
Q 013442 200 SSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGA 279 (443)
Q Consensus 200 ~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gG~~ 279 (443)
... +. ..|. .|+.+. ..++. |
T Consensus 241 ~~~---~~--------~~g~---------------~~~~~~---------------------~~lg~----------G-- 261 (373)
T 1vhe_A 241 GIA---GD--------TPGI---------------SEKEAQ---------------------SKMGK----------G-- 261 (373)
T ss_dssp EEC---CC--------STTC---------------CTTTCC---------------------CCTTS----------C--
T ss_pred ccc---CC--------CCCC---------------cccccc---------------------cccCC----------C--
Confidence 110 00 0111 121110 00000 1
Q ss_pred CccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcccCCHHHHHHHHHHHHHhcCCccc
Q 013442 280 FNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNI 359 (443)
Q Consensus 280 ~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~ 359 (443)
| .+.+. .. +...++++++.+++++++. |.++.
T Consensus 262 ----~-------------------------------------~i~~~---~~---~~~~~~~l~~~l~~~a~~~-gi~~~ 293 (373)
T 1vhe_A 262 ----P-------------------------------------QIIVY---DA---SMVSHKGLRDAVVATAEEA-GIPYQ 293 (373)
T ss_dssp ----C-------------------------------------EEEEE---ET---TEECCHHHHHHHHHHHHHH-TCCCE
T ss_pred ----c-------------------------------------eEEEe---CC---CCCCCHHHHHHHHHHHHHc-CCCeE
Confidence 0 01111 11 2467788999999999887 87653
Q ss_pred ccCCCCCCCchHHHH--Hhh-cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhh
Q 013442 360 KENRPLMGTEDFSFF--AEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLLE 427 (443)
Q Consensus 360 ~~~~~~~g~tDa~~~--~~~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~~~ 427 (443)
.. ...+++||++.| ... +|+++++.|. ..+|+++|+++++++..++++++.++.+++..
T Consensus 294 ~~-~~~~ggtDa~~~~~~~~GiPtv~lg~~~--------~~~Hs~~E~v~~~dl~~~~~ll~~~l~~l~~~ 355 (373)
T 1vhe_A 294 FD-AIAGGGTDSGAIHLTANGVPALSITIAT--------RYIHTHAAMLHRDDYENAVKLITEVIKKLDRK 355 (373)
T ss_dssp EE-EETTCCCTHHHHTTSTTCCCEEEEEEEE--------BSTTSSCEEEEHHHHHHHHHHHHHHHHHCCHH
T ss_pred Ee-cCCCCCccHHHHHHhCCCCcEEEEcccc--------ccCCChhheecHHHHHHHHHHHHHHHHHhcHH
Confidence 21 235688999999 555 9988766542 23899999999999999999999999988754
No 33
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=99.90 E-value=2.4e-27 Score=230.69 Aligned_cols=329 Identities=12% Similarity=-0.013 Sum_probs=180.2
Q ss_pred HHHHHHHHhCCCCCcccH-HHHHHHHHHHHhCCCCeeecccCceEEEEECCCCCcEEEEEEecccccCcccCCCccccCC
Q 013442 53 VNIRRKIHENPELGFQEF-ETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWEHKSKV 131 (443)
Q Consensus 53 i~ll~~l~~ipS~s~~E~-~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~~~~~I~~~~H~DtVp~~~~~~w~~~~~~ 131 (443)
+++|++|++|||+|++|. ++++||+++|+++|++++++. ..|++|+++++ +|+|+|.||+||||.....- ..
T Consensus 12 ~elL~~Lv~ipS~sg~E~~~v~~~l~~~l~~~G~~v~~D~-~GNlia~~~g~-~p~lll~~H~Dtvp~~v~~~-----~~ 84 (354)
T 2wzn_A 12 WKLMQEIIEAPGVSGYEHLGIRDIVVDVLKEVADEVKVDK-LGNVIAHFKGS-SPRIMVAAHMDKIGVMVNHI-----DK 84 (354)
T ss_dssp HHHHHHHHHSCCBTTCGGGTHHHHHHHHHHTTSSEEEECT-TCCEEEEECCS-SSEEEEEEECCBCEEEEEEE-----CT
T ss_pred HHHHHHHhcCCCCCcchHHHHHHHHHHHHHHcCCEEEEeC-CCeEEEEECCC-CceEEEEeccccCCCcCCee-----ec
Confidence 478999999999999885 689999999999999998754 45999999865 59999999999999654322 34
Q ss_pred CCeeecCcc--hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchHHHHHHcCCCCccceeeEecCCCCCCCceE
Q 013442 132 PGKMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTV 208 (443)
Q Consensus 132 ~g~l~GrG~--kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~~~~~g~~~~~d~~i~~~~~~~~~~g~~ 208 (443)
+|.++++|. +.+.++...++..+.+.+ .+...+.++++.+|| +..+.+.+..+.......+...... ...+.
T Consensus 85 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ee~~~~~~~~~~~~~~~~~~g~~~~~~~---~~~~~- 159 (354)
T 2wzn_A 85 DGYLHIVPIGGVLPETLVAQRIRFFTEKG-ERYGVVGVLPPHLRRGQEDKGSKIDWDQIVVDVGASSKEEA---EEMGF- 159 (354)
T ss_dssp TSCEEEEEESSCCGGGGTTCEEEEEETTE-EEEEEECCCCGGGC---------CCGGGCCEECSCSSHHHH---HHTTC-
T ss_pred CCceeeccCCCccHHHHHHHHHHHhhccC-CccceEEEeeeeeEecccccccchhhhhhhhhhcccchhhh---hcccc-
Confidence 677777665 222233333333333333 556778888899999 5566655533222111111111000 00000
Q ss_pred EeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEcCCcCccccCcEE
Q 013442 209 ASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVT 288 (443)
Q Consensus 209 ~~~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gG~~~n~vP~~a~ 288 (443)
. ....+.....+.+.+...|++.+..+.|++..+..++.+|.......... ...+.+++...++...|.++..+.
T Consensus 160 --~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~ 234 (354)
T 2wzn_A 160 --R--VGTVGEFAPNFTRLNEHRFATPYLDDRICLYAMIEAARQLGDHEADIYIV-GSVQEEVGLRGARVASYAINPEVG 234 (354)
T ss_dssp --C--TTCEEEECCCCEECSSSEEECTTHHHHHHHHHHHHHHHHCCCCSSEEEEE-EESCGGGTSHHHHHHHHHHCCSEE
T ss_pred --c--cceeeeeeeeeEeecccccccccccccchhhhHHHHHHHHHhcccccccc-ccceeeeeeecccccccccccccc
Confidence 0 11224445566777888888776555555555444444432211000000 000000001111235566677777
Q ss_pred EEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcccCCHHHHHHHHHH-HHHhcCCcccccCCCCCC
Q 013442 289 IGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKV-AADMLGVQNIKENRPLMG 367 (443)
Q Consensus 289 ~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~-~~~~~g~~~~~~~~~~~g 367 (443)
...+.+........ .......+....... ....++......... .....+.++ .....+|
T Consensus 235 ~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g 295 (354)
T 2wzn_A 235 IAMDVTFAKQPHDK----------GKIVPELGKGPVMDV-------GPNINPKLRAFADEVAKKYEIPLQV--EPSPRPT 295 (354)
T ss_dssp EEEEEEECCCTTST----------TCCCCCTTSCCEEEE-------STTSCHHHHHHHHHHHHHTTCCCEE--EECCSCC
T ss_pred eeeeeeeccccchh----------hhhheeecccccccc-------ccccCcchhhhhHHHHHHhcCCCce--EEEeccc
Confidence 77777665432110 000000011111111 111222222222222 222224433 3456788
Q ss_pred CchHHHHH--hh-cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 013442 368 TEDFSFFA--EA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYL 425 (443)
Q Consensus 368 ~tDa~~~~--~~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~ 425 (443)
+||++++. .. +|++.+|.|. ..+|+|||+++++++.+++++|..++.+|-
T Consensus 296 gTDa~~~~~~~~Giptv~~G~g~--------~~~Ht~~E~v~i~dl~~~~~ll~~~i~~L~ 348 (354)
T 2wzn_A 296 GTDANVMQINKEGVATAVLSIPI--------RYMHSQVELADARDVDNTIKLAKALLEELK 348 (354)
T ss_dssp SSHHHHHHTSTTCCEEEEEEEEE--------BSTTSTTCEEEHHHHHHHHHHHHHHHHHCC
T ss_pred ccHHHHHHHhcCCCCEEEECccc--------CCCCcccEEEEHHHHHHHHHHHHHHHHhCc
Confidence 99999874 33 8988876552 238999999999999999999999998863
No 34
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=99.90 E-value=9.7e-23 Score=198.85 Aligned_cols=239 Identities=18% Similarity=0.188 Sum_probs=174.8
Q ss_pred HHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeecccCceEEEEECCCCCcEEEEEEeccccc-------------
Q 013442 52 MVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALA------------- 118 (443)
Q Consensus 52 ~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~~~~~I~~~~H~DtVp------------- 118 (443)
+++++++|+++||+|++|.++++||.++|+++|+ ++. +...|++++++++ +|+|+|.||+|||+
T Consensus 4 ~~~~l~~l~~~~s~sg~e~~~~~~l~~~l~~~g~-~~~-d~~gnlia~~~~~-~~~i~l~aH~D~v~~~v~~i~~~G~l~ 80 (332)
T 2wyr_A 4 MIEKLKKFTQIPGISGYEERIREEIIREIKDFAD-YKV-DAIGNLIVELGEG-EERILFMAHMDEIGLLITGITDEGKLR 80 (332)
T ss_dssp HHHHHHHHHTSCCBTTCCHHHHHHHHHHHTTTCC-CEE-CTTCCEEEEEESS-SEEEEEEEECCBCEEEEEEECTTSCEE
T ss_pred HHHHHHHHHcCCCCCCcHHHHHHHHHHHHhhcCc-EEE-cCCCeEEEEecCC-CceEEEEeccCcccEEEEEECCCCeEE
Confidence 6789999999999999999999999999999999 765 4567899998663 58999999999994
Q ss_pred ---CcccCCCcc--------------------------------------------------------------------
Q 013442 119 ---MEESVEWEH-------------------------------------------------------------------- 127 (443)
Q Consensus 119 ---~~~~~~w~~-------------------------------------------------------------------- 127 (443)
.|. |..
T Consensus 81 ~~~~Gg---~~~~~~~~~~v~v~~~~g~~~g~i~~~~~h~~~~~~~~~~~~~~~~id~g~~~~~~~~~~i~~Gd~~~~~~ 157 (332)
T 2wyr_A 81 FRKVGG---IDDRLLYGRHVNVVTEKGILDGVIGATPPHLSLERDKSVIPWYDLVIDIGAESKEEALELVKPLDFAVFKK 157 (332)
T ss_dssp EEEESC---CCGGGTTTEEEEEECSSCEEEEEECCCCTTC-----CCCCCGGGCCBBCSCSSHHHHHHHCCTTCEEEECC
T ss_pred EEecCC---cChhhccCCEEEEEcCCCCEEEEEcCCCcccChhhhccCCChHHEEEEeCCCCHHHHHhhCCCCCEEEEcc
Confidence 442 321
Q ss_pred --ccCCCCeeecCcc--hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchHHHHHHcCCCCccceeeEecCCCC
Q 013442 128 --KSKVPGKMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSL 202 (443)
Q Consensus 128 --~~~~~g~l~GrG~--kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~~~~~g~~~~~d~~i~~~~~~~ 202 (443)
....++++|||.. |++++++++|++.|++.+ ++++|.|+|+++|| |+.|++++.+ . ..+|++++.++...
T Consensus 158 ~~~~~~~~~i~gra~D~k~g~a~~l~a~~~l~~~~--~~~~i~~~~~~~EE~G~~G~~~~~~--~-~~~~~~i~~d~~~~ 232 (332)
T 2wyr_A 158 HFSVLNGKYVSTRGLDDRFGVVALIEAIKDLVDHE--LEGKVIFAFTVQEEVGLKGAKFLAN--H-YYPQYAFAIDSFAC 232 (332)
T ss_dssp CCEEETTTEEECTTHHHHHHHHHHHHHHHTTTTSC--CSSEEEEEEESCGGGTSHHHHHHTT--T-CCCSEEEEECCEEC
T ss_pred ccEEecCCeEEcccCCcHHHHHHHHHHHHHHhhcC--CCceEEEEEECccccCcchHHHHhc--c-cCCCEEEEEecccc
Confidence 1125789999944 799999999999998765 67999999999999 7789998854 1 24677776543110
Q ss_pred CCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEcCCcCcc
Q 013442 203 FPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNI 282 (443)
Q Consensus 203 ~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gG~~~n~ 282 (443)
. . . .| +.+. .+. |..
T Consensus 233 ~--~----~-----p~---------------~~~~--------------------------lg~----------G~~--- 247 (332)
T 2wyr_A 233 C--S----P-----LT---------------GDVK--------------------------LGK----------GPV--- 247 (332)
T ss_dssp C--S----G-----GG---------------TTCC--------------------------TTS----------CCE---
T ss_pred c--C----C-----CC---------------Ccee--------------------------eCC----------CCE---
Confidence 0 0 0 11 0000 000 100
Q ss_pred ccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcccCCHHHHHHHHHHHHHhcCCcccccC
Q 013442 283 IPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKEN 362 (443)
Q Consensus 283 vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~ 362 (443)
+.+. .. ....++++++.+++++++. |.+...
T Consensus 248 ----------------------------------------i~~~---d~---~~~~~~~l~~~l~~~~~~~-gi~~~~-- 278 (332)
T 2wyr_A 248 ----------------------------------------IRAV---DN---SAIYSRDLARKVWSIAEKN-GIEIQI-- 278 (332)
T ss_dssp ----------------------------------------EEEE---CS---SCBCCHHHHHHHHHHHHHT-TCCCEE--
T ss_pred ----------------------------------------EEEc---CC---CCCCCHHHHHHHHHHHHHc-CCCeEE--
Confidence 1110 01 2456788999999999887 876532
Q ss_pred CCCCCCchHHHHHhhcCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH
Q 013442 363 RPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATR 423 (443)
Q Consensus 363 ~~~~g~tDa~~~~~~ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~ 423 (443)
...+++||++.|...+|+++++.|. ..+|+++|+++++++.+++++++.++.+
T Consensus 279 ~~~~ggtDa~~~~~GiPtv~lg~~~--------~~~Hs~~E~v~~~dl~~~~~ll~~~~~~ 331 (332)
T 2wyr_A 279 GVTGGGTDASAFQDRSKTLALSVPI--------KYLHSEVETLHLNDLEKLVKLIEALAFE 331 (332)
T ss_dssp EECSSCCGGGGGTTTSEEEEEECEE--------BSCSSTTCEEEHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCchHHHHHcCCCEEEEcCCc--------CCCCChhhcccHHHHHHHHHHHHHHHHh
Confidence 3456889999887678987755332 2499999999999999999999998865
No 35
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=99.88 E-value=1.7e-21 Score=191.52 Aligned_cols=247 Identities=18% Similarity=0.150 Sum_probs=175.4
Q ss_pred HHHHHHHHHhCCCCCccc-HHHHHHHHHHHHhCCCCeeecccCceEEEEECCCCCcEEEEEEeccccc------------
Q 013442 52 MVNIRRKIHENPELGFQE-FETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALA------------ 118 (443)
Q Consensus 52 ~i~ll~~l~~ipS~s~~E-~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~~~~~I~~~~H~DtVp------------ 118 (443)
+++++++|+++||+|++| .++++||.++|+++|++++.+ ...|+++.++++ +|+|+|.||+|+|+
T Consensus 8 ~~~~l~~L~~~~s~sg~e~~~~~~~l~~~l~~~g~~~~~d-~~gnlia~~~g~-~~~i~l~aH~D~v~~~v~~i~~~G~l 85 (353)
T 1y0y_A 8 DYELLKKVVEAPGVSGYEFLGIRDVVIEEIKDYVDEVKVD-KLGNVIAHKKGE-GPKVMIAAHMDQIGLMVTHIEKNGFL 85 (353)
T ss_dssp CHHHHHHHHHSCCBTTCGGGTHHHHHHHHHGGGSSEEEEC-TTCCEEEEECCS-SCEEEEEEECCBCEEEEEEECTTSCE
T ss_pred HHHHHHHHHhCCCCCccchHHHHHHHHHHHHhhCCeEEEc-CCCCEEEEecCC-CccEEEEeccCcccEEEEEECCCceE
Confidence 578899999999999999 999999999999999998864 456899998665 58999999999995
Q ss_pred ----CcccCCCccc------------------------------------------------------------------
Q 013442 119 ----MEESVEWEHK------------------------------------------------------------------ 128 (443)
Q Consensus 119 ----~~~~~~w~~~------------------------------------------------------------------ 128 (443)
.|. |...
T Consensus 86 ~~~~~Gg---~~~~~~~~~~v~v~~~~g~~~~g~i~~~~~h~~~~~~~~~~~~~~~l~~d~g~~~~~~~~~~gi~~Gd~v 162 (353)
T 1y0y_A 86 RVAPIGG---VDPKTLIAQRFKVWIDKGKFIYGVGASVPPHIQKPEDRKKAPDWDQIFIDIGAESKEEAEDMGVKIGTVI 162 (353)
T ss_dssp EEEEESS---CCGGGTTTCEEEEEEETTEEEEEEEEC-------------CCCGGGCEEECSCSSHHHHHHTTCCTTCEE
T ss_pred EEEEeCC---cchhhccCCEEEEEeCCCcEEEEEEeCCCcccCchhhccCCCChHHeEEEeCCCCHHHHHHcCCCCCCEE
Confidence 332 2100
Q ss_pred -------cCCCCeeecCcc--hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchHHHHHHcCCCCccceeeEec
Q 013442 129 -------SKVPGKMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLH 198 (443)
Q Consensus 129 -------~~~~g~l~GrG~--kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~~~~~g~~~~~d~~i~~~ 198 (443)
...++++|||.. |+++++++.+++.|++ ++++|.|+|+++|| |+.|++.+... ..+|++++.+
T Consensus 163 ~~~~~~~~~~~~~i~gra~D~k~g~a~~l~a~~~l~~----~~~~i~~~~~~~EE~g~~G~~~~~~~---~~~~~~i~~d 235 (353)
T 1y0y_A 163 TWDGRLERLGKHRFVSIAFDDRIAVYTILEVAKQLKD----AKADVYFVATVQEEVGLRGARTSAFG---IEPDYGFAID 235 (353)
T ss_dssp EECCCCEEETTTEEEETTHHHHHHHHHHHHHHHHCCS----CSSEEEEEEESCCTTTSHHHHHHHHH---HCCSEEEEEE
T ss_pred EeccCcEEecCCeEEeccCccHHHHHHHHHHHHHhhc----CCCeEEEEEECCcccchhHHHHHhhc---cCCCEEEEEe
Confidence 001467889855 7999999999999875 67899999999999 77899888642 1356666543
Q ss_pred CCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEcCC
Q 013442 199 VSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGG 278 (443)
Q Consensus 199 ~~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gG~ 278 (443)
+.... + .++. . .+.| ...+ .+|.
T Consensus 236 ~~~~~--~----~p~~------------------~--~~~g---------------------~~~l----------g~G~ 258 (353)
T 1y0y_A 236 VTIAA--D----IPGT------------------P--EHKQ---------------------VTHL----------GKGT 258 (353)
T ss_dssp EEECC--C----STTC------------------C--GGGC---------------------CCCT----------TSCE
T ss_pred ccccc--C----CCCC------------------c--cccC---------------------cccc----------CCCc
Confidence 21100 0 0100 0 0000 0000 0120
Q ss_pred cCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcccCCHHHHHHHHHHHHHhcCCcc
Q 013442 279 AFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQN 358 (443)
Q Consensus 279 ~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~ 358 (443)
. +.+.. . ....++++++.+++++++. |.+.
T Consensus 259 ~-------------------------------------------i~~~d--~----~~~~~~~l~~~l~~~a~~~-gi~~ 288 (353)
T 1y0y_A 259 A-------------------------------------------IKIMD--R----SVICHPTIVRWLEELAKKH-EIPY 288 (353)
T ss_dssp E-------------------------------------------EEEEE--T----TEECCHHHHHHHHHHHHHT-TCCE
T ss_pred E-------------------------------------------EEEeC--C----CCCCCHHHHHHHHHHHHHc-CCCE
Confidence 0 11111 1 2456788999999999887 8765
Q ss_pred cccCCCCCCCchHHHH--Hhh-cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 013442 359 IKENRPLMGTEDFSFF--AEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLL 426 (443)
Q Consensus 359 ~~~~~~~~g~tDa~~~--~~~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~~ 426 (443)
... ...+++||++.| ... +|+++++.|. ..+|+++|+++++++..++++|+.++.++..
T Consensus 289 ~~~-~~~~ggsDa~~~~~~~~GiPtv~lg~~~--------~~~Hs~~E~v~~~dl~~~~~ll~~~l~~l~~ 350 (353)
T 1y0y_A 289 QLE-ILLGGGTDAGAIHLTKAGVPTGALSVPA--------RYIHSNTEVVDERDVDATVELMTKALENIHE 350 (353)
T ss_dssp EEE-ECSSCCCTHHHHTTSTTCCCEEEEEEEE--------BSCSSSCEEEEHHHHHHHHHHHHHHHHHGGG
T ss_pred EEe-ecCCCCchHHHHHHhCCCCcEEEEcccc--------cccCCHHHhcCHHHHHHHHHHHHHHHHhhhh
Confidence 321 246788999999 555 9988766542 2499999999999999999999999988763
No 36
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=99.87 E-value=1.7e-21 Score=191.17 Aligned_cols=240 Identities=15% Similarity=0.122 Sum_probs=163.0
Q ss_pred HHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeecccCceEEEEECCC-CCcEEEEEEecccc-----------
Q 013442 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG-QPPFVALRADMDAL----------- 117 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~-~~~~I~~~~H~DtV----------- 117 (443)
+++++++++|++|||+|++|.++++|+.++|+++|++++++ ...|+++++++. .+|+|+|+||+|||
T Consensus 6 ~~~~~~l~~lv~i~s~s~~e~~~~~~l~~~l~~~g~~~~~d-~~gnl~a~~~g~~~~~~ill~~H~Dtv~~~v~~i~~~G 84 (349)
T 2gre_A 6 KETMELIKELVSIPSPSGNTAKIINFIENYVSEWNVETKRN-NKGALILTVKGKNDAQHRLLTAHVDTLGAMVKEIKPDG 84 (349)
T ss_dssp HHHHHHHHHHHTSCCBTTCCHHHHHHHHHHTTTSSSEEEEC-SSSCEEEEECCSEEEEEEEEEEECCBCEEEEEEECTTS
T ss_pred HHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHhCCEEEEe-cCCcEEEEecCCCCCceEEEEecccccceeEEEECCCC
Confidence 67999999999999999999999999999999999998875 456899999654 34899999999999
Q ss_pred -----cCcccCCCccc----------------------------------------------------------------
Q 013442 118 -----AMEESVEWEHK---------------------------------------------------------------- 128 (443)
Q Consensus 118 -----p~~~~~~w~~~---------------------------------------------------------------- 128 (443)
|.| +|..+
T Consensus 85 ~l~~~~~G---g~~~~~~~~~~v~i~~~~g~~~~g~i~~~~~~~h~~~~~~~~~~~~~~l~~~id~g~~~~~~~~~~gi~ 161 (349)
T 2gre_A 85 RLSLSMIG---GFRWNSVEGEYCEIETSSGKTYTGTILMHQTSVHVYKDAGEAKRDEKNIEVRIDERVFSADEVRELGIE 161 (349)
T ss_dssp CEEEEEES---SCCGGGTTTCEEEEECTTSCEEEEEEECC-------------------CEEEESSCCCSHHHHHHTTCC
T ss_pred eEEEEecC---CCccccccCcEEEEEcCCCCEEEEEEeCCCCCccccchhccCCCCHHHceEEeccCCCCHHHHHHcCCC
Confidence 443 23211
Q ss_pred ------------cCCCCeeecCcc--hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchHHHHHHcCCCCccce
Q 013442 129 ------------SKVPGKMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEA 193 (443)
Q Consensus 129 ------------~~~~g~l~GrG~--kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~~~~~g~~~~~d~ 193 (443)
...+|++|||+. |++++++|+|++.|++.+..++++|.|+|+++|| |+.|++.+ . .++|+
T Consensus 162 ~gd~v~~~~~~~~~~~~~i~gr~~D~k~g~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~G~~g~~~~----~-~~~~~ 236 (349)
T 2gre_A 162 VGDFVSFDPRVQITESGYIKSRHLDDKVSVAILLKLIKRLQDENVTLPYTTHFLISNNEEIGYGGNSNI----P-EETVE 236 (349)
T ss_dssp TTCEEEECCCCEECTTSEEEESCCTTHHHHHHHHHHHHHHHHHTCCCSEEEEEEEESCC----CCCCCC----C-TTEEE
T ss_pred CCCEEEEccccEEccCCeEEEeeccchHHHHHHHHHHHHHHhccCCCCceEEEEEECcccCCchhhccc----c-cCCCE
Confidence 013589999976 7999999999999998877788999999999999 76787754 1 24566
Q ss_pred eeEecCCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHHhhccccCCCCCceEEEEE
Q 013442 194 IFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAK 273 (443)
Q Consensus 194 ~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~ 273 (443)
++..++.. . +. |-..++.|. +
T Consensus 237 ~i~~D~~~--~-------------~~------------~p~~~~~g~-----------------------------~--- 257 (349)
T 2gre_A 237 YLAVDMGA--L-------------GD------------GQASDEYTV-----------------------------S--- 257 (349)
T ss_dssp EEEECCCC--C-------------SC------------C--CCTTSE-----------------------------E---
T ss_pred EEEEeccc--c-------------cC------------CCCCCCCce-----------------------------E---
Confidence 66543211 0 00 000000000 0
Q ss_pred EEcCCcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcccCCHHHHHHHHHHHHHh
Q 013442 274 FEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADM 353 (443)
Q Consensus 274 i~gG~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 353 (443)
+.+.. . .. ..++.+.+.+++++++.
T Consensus 258 -------------------------------------------------i~~~~--~-~~---~~~~~l~~~l~~~a~~~ 282 (349)
T 2gre_A 258 -------------------------------------------------ICAKD--S-SG---PYHYALRKHLVELAKTN 282 (349)
T ss_dssp -------------------------------------------------EEEEE--T-TE---ECCHHHHHHHHHHHHHH
T ss_pred -------------------------------------------------EEEcc--C-CC---CCCHHHHHHHHHHHHHc
Confidence 00100 0 00 25677888888888887
Q ss_pred cCCcccccCCCCCCCchHHHHHh--h-cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH
Q 013442 354 LGVQNIKENRPLMGTEDFSFFAE--A-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATR 423 (443)
Q Consensus 354 ~g~~~~~~~~~~~g~tDa~~~~~--~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~ 423 (443)
|.+.... ...+|++|+..+.. . +|+++++.+.. ..|+ .|+++++++..+++++..++.+
T Consensus 283 -gi~~q~~-~~~ggGsDa~~~~~~~~GiPt~~lg~~~~--------~~Hs-~E~~~~~dl~~~~~ll~~~l~~ 344 (349)
T 2gre_A 283 -HIEYKVD-IYPYYGSDASAAIRAGFDVKHALIGAGID--------SSHA-FERTHESSIAHTEALVYAYVMS 344 (349)
T ss_dssp -TCCEEEE-ECSCC--------CCSSSCEEEEEEECCB--------STTS-SEEEEHHHHHHHHHHHHHHHHS
T ss_pred -CCCcEEe-ccCCCCccHHHHHHhCCCCcEEEeccCcc--------cccc-ceeccHHHHHHHHHHHHHHHhc
Confidence 7765321 23678899988843 4 89886655432 3999 9999999999999998887753
No 37
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.86 E-value=4.9e-21 Score=187.87 Aligned_cols=248 Identities=17% Similarity=0.123 Sum_probs=167.3
Q ss_pred HHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeecccCceEEEEECCCCCcEEEEEEecccccCc---------
Q 013442 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAME--------- 120 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~~~~~I~~~~H~DtVp~~--------- 120 (443)
.++++++++|+++||+|++|.++++||.++|+++|++++.+ ...|+++.+.+.+.|.|+|.||+|||+.-
T Consensus 5 ~~~~~~l~~Lv~~~s~sg~e~~~~~~l~~~l~~~g~~~~~d-~~gnlia~~~g~~~~~i~l~aH~DtV~~~v~~i~~G~l 83 (346)
T 1vho_A 5 METGKLLMELSNLDGPSGYETNVVSYIKSVIEPFVDEAKTT-RHGSLIGYKKGKGIGKLAFFAHVDEIGFVVSKVEGQFA 83 (346)
T ss_dssp CCHHHHHHHHHHSCCBTTCCHHHHHHHHHHHGGGCSEEEEC-TTSCEEEEECCSSSCEEEEEEECCBCCEEEEEEETTEE
T ss_pred HHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHhhCCEEEEe-cCCcEEEEEcCCCCceEEEEecCcccceEeEEecCCeE
Confidence 34788999999999999999999999999999999998875 35689999865445899999999999520
Q ss_pred ---ccCCCcccc-----------------------------------------------------------------CCC
Q 013442 121 ---ESVEWEHKS-----------------------------------------------------------------KVP 132 (443)
Q Consensus 121 ---~~~~w~~~~-----------------------------------------------------------------~~~ 132 (443)
...+|.... ..+
T Consensus 84 ~~~~~Gg~~~~~~~g~~~~~~~~~g~~~G~i~~~~~h~~~~~~~~~~~~~~~l~id~g~~~eei~~G~~~~~~~~~~~~g 163 (346)
T 1vho_A 84 RLEPVGGVDPKVVYASKVRIYTKNGIERGVIGMLAPHLQDSESRKKVPTYDEIFVDLSLCERGVRVGDIAVIDQTAFETN 163 (346)
T ss_dssp EEEEC--------CCCEEEEEETTEEEEEETTCCCSCCCCHHHHHTSCCTTCCEEEGGGSSSCCCTTCEEEECCCCEEET
T ss_pred EEEEeCCccCcccccCEEEEEcCCCcEEEEEcCCCcccCchhhcccCCChhHeEEEeccchhcCCCCCEEEEccchhhhc
Confidence 111342110 012
Q ss_pred CeeecCcc--hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchHHHHHHcCCCCccceeeEecCCCCCCCceEE
Q 013442 133 GKMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVA 209 (443)
Q Consensus 133 g~l~GrG~--kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~~~~~g~~~~~d~~i~~~~~~~~~~g~~~ 209 (443)
|+++||+. |.++++++.+++.+++.+ +++++.++|+.+|| |..|+..... .+ ..|+.+..+
T Consensus 164 ~~i~g~~~D~r~g~aa~l~al~~l~~~~--~~~~~~~~~t~~EEvG~~Ga~~~~~--~i-~~~~~i~~D----------- 227 (346)
T 1vho_A 164 GKVVGKALDNRASCGVLVKVLEFLKRYD--HPWDVYVVFSVQEETGCLGALTGAY--EI-NPDAAIVMD----------- 227 (346)
T ss_dssp TEEEETTHHHHHHHHHHHHHHHHHTTCC--CSSEEEEEEECTTSSSHHHHHHTTC--CC-CCSEEEEEE-----------
T ss_pred CeEEeccCccHHHHHHHHHHHHHhhhcC--CCceEEEEEECCcccchhhHHHHhc--cc-CCCEEEEee-----------
Confidence 66888887 689999999999998754 66899999999999 6677765421 11 223333221
Q ss_pred eecCcccccceEEEEEEEecCCCCC-CCCCCCcHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEcCCcCccccCcEE
Q 013442 210 SRPGPTLAAGGFFEAVINGKGGHAA-IPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVT 288 (443)
Q Consensus 210 ~~~g~~~~g~~~~~v~v~G~~aHss-~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gG~~~n~vP~~a~ 288 (443)
+ .|++ .|. .+ . . ..+
T Consensus 228 --------------~------~~~~~~~~--~~--~-----------~------~~~----------------------- 243 (346)
T 1vho_A 228 --------------V------TFASEPPF--SD--H-----------I------ELG----------------------- 243 (346)
T ss_dssp --------------E------ECCCCTTS--CC--C-----------C------CTT-----------------------
T ss_pred --------------c------ccccCCCC--Cc--c-----------c------ccC-----------------------
Confidence 1 1211 111 01 0 0 000
Q ss_pred EEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcccCCHHHHHHHHHHHHHhcCCcccccCCCCC-C
Q 013442 289 IGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLM-G 367 (443)
Q Consensus 289 ~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~-g 367 (443)
.+. .+++ +...++.+++.+++++++. |.+.... ...+ |
T Consensus 244 ------------------------------~g~--~i~~-------~~~~~~~l~~~~~~~a~~~-gi~~~~~-~~~g~g 282 (346)
T 1vho_A 244 ------------------------------KGP--VIGL-------GPVVDRNLVQKIIEIAKKH-NVSLQEE-AVGGRS 282 (346)
T ss_dssp ------------------------------SCC--EEEC-------STTSCHHHHHHHHHHHHHT-TCCCEEE-SSCCC-
T ss_pred ------------------------------CCc--eEEe-------CCcCCHHHHHHHHHHHHHC-CCCEEEE-eCCCCC
Confidence 011 1211 2357888999999999987 8876432 1224 7
Q ss_pred CchHHHHHh--h-cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhh
Q 013442 368 TEDFSFFAE--A-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLLE 427 (443)
Q Consensus 368 ~tDa~~~~~--~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~~~ 427 (443)
++|++.+.. . +|+++++.|.. .+|+|+|+++++++..+++++..++.+++.+
T Consensus 283 gsDa~~~~~~~~gipt~~lg~~~~--------~~Hs~~E~~~~~dl~~~~~ll~~~~~~~~~~ 337 (346)
T 1vho_A 283 GTETDFVQLVRNGVRTSLISIPLK--------YMHTPVEMVDPRDVEELARLLSLVAVELEVE 337 (346)
T ss_dssp ---CTTHHHHHTTCEEEEEEEECB--------STTSTTEEECHHHHHHHHHHHHHHHHHCC--
T ss_pred CchHHHHHHhCCCCcEEEEehhhc--------ccccHHHhcCHHHHHHHHHHHHHHHHHhhhh
Confidence 899999854 3 99888766532 3999999999999999999999999987754
No 38
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=99.83 E-value=8.6e-21 Score=183.87 Aligned_cols=237 Identities=14% Similarity=0.092 Sum_probs=164.4
Q ss_pred HHHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeecc------cCceEEEEECCCCCcEEEEEEeccccc----
Q 013442 49 FYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPV------AVTGVVGYIGTGQPPFVALRADMDALA---- 118 (443)
Q Consensus 49 ~~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~~------~~~~via~~~~~~~~~I~~~~H~DtVp---- 118 (443)
++++++++++|+++||+|++|.++++||+++|+++|++++.+. +..|+++.+++ . |.|+|.||+|||+
T Consensus 16 ~~~~~~~l~~Lv~i~s~sg~e~~v~~~l~~~l~~~g~~v~~d~~~~~~~~~gnlia~~~g-~-~~ill~aH~DtV~~~v~ 93 (321)
T 3cpx_A 16 YFQGMQLLKELCSIHAPSGNEEPLKDFILEYIRSNAGSWSYQPVIYADNDLQDCIVLVFG-N-PRTAVFAHMDSIGFTVS 93 (321)
T ss_dssp GCCHHHHHHHHHHSCCBTTCCHHHHHHHHHHHHHHGGGSSSCCEEECSGGGTTCEEEEES-S-CSEEEEEECCBCEEEEC
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhhCCeEEEccccccccCCccEEEEecC-C-ceEEEEecCCcCCeEec
Confidence 3678999999999999999999999999999999999876643 14689998865 4 8899999999993
Q ss_pred -------CcccCCCc-----ccc-------------------------------------CCCCeeecCcc--hHHHHHH
Q 013442 119 -------MEESVEWE-----HKS-------------------------------------KVPGKMHACGH--DAHVAML 147 (443)
Q Consensus 119 -------~~~~~~w~-----~~~-------------------------------------~~~g~l~GrG~--kg~~a~~ 147 (443)
.|....|. ... ..+|+++||+. |++++++
T Consensus 94 ~i~~~~~~Gg~~~~~~~~v~~~~~~g~~~gvi~~~ee~~~ida~~lv~~Gd~v~~~~~~~~~~g~i~~~~~D~k~G~aa~ 173 (321)
T 3cpx_A 94 YNNHLHPIGSPSAKEGYRLVGKDSNGDIEGVLKIVDEEWMLETDRLIDRGTEVTFKPDFREEGDFILTPYLDDRLGVWTA 173 (321)
T ss_dssp STTBEEEESSCCCCTTCEEEEEETTEEEEEEEECGGGSCEEECSSCCCTTCEEEECCCCEEETTEEECTTHHHHHHHHHH
T ss_pred ccCCeEEcCChhhcccCEEEEEeCCCceeeeECCccHHHHHHHHhcCCCCCEEEeccCcEEEcCEEEEcCCcCHHHHHHH
Confidence 33311221 000 00267888886 7999999
Q ss_pred HHHHHHHHcccccCCceEEEEEeccCC-ccchHHHHH---HcCCCCccceeeEecCCCCCCCceEEeecCcccccceEEE
Q 013442 148 LGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKML---DAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFE 223 (443)
Q Consensus 148 l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~~~---~~g~~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~g~~~~~ 223 (443)
+.+++.++ + +.++|+.+|| |+.|++... .+.. +.|+++..++.. .+.
T Consensus 174 l~al~~l~------~--i~~~~t~~EEvG~~Ga~~a~~~~~~~~--~~~~~i~~D~~~---------------~~~---- 224 (321)
T 3cpx_A 174 LELAKTLE------H--GIIAFTCWEEHGGGSVAYLARWIYETF--HVKQSLICDITW---------------VTE---- 224 (321)
T ss_dssp HHHTTTCC------S--EEEEEESSTTTTCCSHHHHHHHHHHHH--CCCEEEECCCEE---------------CCS----
T ss_pred HHHHHHhc------C--cEEEEECCccCchhcchhhhhcccccc--CCCEEEEEeCcc---------------ccC----
Confidence 99987764 2 8999999999 777887532 1111 345666532100 010
Q ss_pred EEEEecCCCCCCCCCCCcHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEcCCcCccccCcEEEEEEEecCChHHHHH
Q 013442 224 AVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQ 303 (443)
Q Consensus 224 v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gG~~~n~vP~~a~~~~diR~~~~~~~~~ 303 (443)
. ...+
T Consensus 225 -------------------------------~------~~~~-------------------------------------- 229 (321)
T 3cpx_A 225 -------------------------------G------VEAG-------------------------------------- 229 (321)
T ss_dssp -------------------------------S------SCTT--------------------------------------
T ss_pred -------------------------------C------cccC--------------------------------------
Confidence 0 0000
Q ss_pred HHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcccCCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHH--hh-cCc
Q 013442 304 LKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFA--EA-IPG 380 (443)
Q Consensus 304 v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~~~--~~-ip~ 380 (443)
.|. .+.. .. . ...++++++.+++++++. |.+.... ...+|+||++.+. .. +|+
T Consensus 230 ---------------~G~--~i~~--~~-~--~~~~~~l~~~~~~~a~~~-gi~~q~~-~~~~GGsD~~~~~~s~~Gipt 285 (321)
T 3cpx_A 230 ---------------KGV--AISM--RD-R--MIPRKKYVNRIIELARQT-DIPFQLE-VEGAGASDGRELQLSPYPWDW 285 (321)
T ss_dssp ---------------SCE--EEEE--ES-S--SCCCHHHHHHHHHHHTTS-SCCEEEE-ECSSCCCHHHHHHHSSSCCBC
T ss_pred ---------------CCc--EEEE--CC-C--CCCCHHHHHHHHHHHHHc-CCCEEEE-eCCCCCccHHHHHHhCCCCCE
Confidence 011 1222 11 1 246788999999998887 8865322 2367889999984 44 898
Q ss_pred EEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH
Q 013442 381 YFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATR 423 (443)
Q Consensus 381 ~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~ 423 (443)
+.++.|. ..+|+++|++.++++..++++++.++.+
T Consensus 286 ~~lG~~~--------~~~Hs~~E~~~~~dl~~~~~ll~~~~~~ 320 (321)
T 3cpx_A 286 CFIGAPE--------KDAHTPNECVHKKDIESMVGLYKYLMEK 320 (321)
T ss_dssp CBEECEE--------BSTTSTTCEEEHHHHHHHHHHHHHHHHH
T ss_pred EEEchhh--------cccchhhhheeHHHHHHHHHHHHHHHHh
Confidence 8555432 2499999999999999999999998865
No 39
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=99.83 E-value=2.4e-19 Score=175.91 Aligned_cols=248 Identities=15% Similarity=0.129 Sum_probs=172.3
Q ss_pred HHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeecccCceEEEEECCCCCcEEEEEEecccccC--------c-----
Q 013442 54 NIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAM--------E----- 120 (443)
Q Consensus 54 ~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~~~~~I~~~~H~DtVp~--------~----- 120 (443)
+++++|+++||+|++|.++++||.++|+++|++++.+. ..|+++++.+...|+|+|.||+|||+. |
T Consensus 7 ~~l~~Lv~~~s~sg~e~~~~~~l~~~l~~~g~~v~~d~-~gnlia~~~g~~~~~vll~aH~DtV~~~v~~i~~~G~~~~~ 85 (348)
T 1ylo_A 7 SLLKALSEADAIASSEQEVRQILLEEAARLQKEVRFDG-LGSVLIRLNESTGPKVMICAHMDEVGFMVRSISREGAIDVL 85 (348)
T ss_dssp HHHHHHHHSCCBTTBCHHHHHHHHHHHHHTTCCEEECT-TCCEEEECCCCSSCEEEEEEECCCCEEEEEEECTTCCEEEE
T ss_pred HHHHHHHcCCCCCCchHHHHHHHHHHHHhhCCEEEEec-CCCEEEEecCCCCceEEEEEcCCccceEEEEECCCCeEEEE
Confidence 68999999999999999999999999999999988654 458999986544589999999999951 0
Q ss_pred ccCCCcc---------------------------------------------------------------ccCCCCeeec
Q 013442 121 ESVEWEH---------------------------------------------------------------KSKVPGKMHA 137 (443)
Q Consensus 121 ~~~~w~~---------------------------------------------------------------~~~~~g~l~G 137 (443)
...+|.+ ....+|++||
T Consensus 86 ~~Gg~~~~~~~g~~v~~~~~~G~~~~h~~~~~~~~~~~~~l~id~G~~s~~~~~~~gi~~g~~i~~~~~~~~~~~~~~~~ 165 (348)
T 1ylo_A 86 PVGNVRMAARQLQPVRITTREECKIPGLLDGDRQGNDVSAMRVDIGARTYDEVMQAGIRPGDRVTFDTTFQVLPHQRVMG 165 (348)
T ss_dssp EESCCCGGGSSSEEEEEECTTCCEEEEEEEEEEETTEEEEEEEECSCCSHHHHHHTTCCTTCEEEECCCCEEETTTEEEE
T ss_pred ecCCcchhhccCCEEEEEeCCCCCCcchhhhhccCCChhHEEEEecCCCHHHHHHcCCCCCCEEEEccccEEecCCEEEe
Confidence 0011211 0114688999
Q ss_pred Ccc--hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchHHHHHHcCCCCccceeeEecCCCCCCCceEEeecCc
Q 013442 138 CGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGP 214 (443)
Q Consensus 138 rG~--kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~~~~~g~~~~~d~~i~~~~~~~~~~g~~~~~~g~ 214 (443)
|+. |+++++++.+++.+++.+ ++.++.++++.+|| |+.|++..... + ..|+.+..+..
T Consensus 166 ~~~D~k~g~aa~l~al~~l~~~~--~~~~~~~~~t~~EEvG~~Ga~~~~~~--i-~~~~~i~~D~~-------------- 226 (348)
T 1ylo_A 166 KAFDDRLSCYLLVTLLRELHDAE--LPAEVWLVASSSEEVGLRGGQTATRA--V-SPDVAIVLDTA-------------- 226 (348)
T ss_dssp TTHHHHHHHHHHHHHHHHHTTCC--CSSEEEEEEESCCTTSSHHHHHHHHH--H-CCSEEEEECCC--------------
T ss_pred cCcccHHHHHHHHHHHHHhhhcC--CCceEEEEEEcccccchhHHHHhhcc--c-CCCEEEEEecc--------------
Confidence 987 689999999999987653 67899999999999 77887765431 1 23555543221
Q ss_pred ccccceEEEEEEEecCCCCC-CCCCCCcHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEcCCcCccccCcEEEEEEE
Q 013442 215 TLAAGGFFEAVINGKGGHAA-IPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTF 293 (443)
Q Consensus 215 ~~~g~~~~~v~v~G~~aHss-~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gG~~~n~vP~~a~~~~di 293 (443)
|++ .|. .+. . . ....+ .
T Consensus 227 -----------------~~~~~~~--~~~-----------~----~-~~~~~----------~----------------- 244 (348)
T 1ylo_A 227 -----------------CWAKNFD--YGA-----------A----N-HRQIG----------N----------------- 244 (348)
T ss_dssp -----------------CCSSTTC--CST-----------T----C-CCCTT----------S-----------------
T ss_pred -----------------ccCCCCC--CCc-----------c----c-cccCC----------C-----------------
Confidence 111 121 110 0 0 00000 0
Q ss_pred ecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcccCCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHH
Q 013442 294 RAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSF 373 (443)
Q Consensus 294 R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~ 373 (443)
|..+++. .. ....++.+++.+++++++. |.+.... ..++|+||++.
T Consensus 245 --------------------------G~~i~~~---~~---~~~~~~~l~~~~~~~a~~~-gi~~~~~-~~~~ggsDa~~ 290 (348)
T 1ylo_A 245 --------------------------GPMLVLS---DK---SLIAPPKLTAWIETVAAEI-GVPLQAD-MFSNGGTDGGA 290 (348)
T ss_dssp --------------------------CCEEEEE---CS---SCBCCHHHHHHHHHHHHHH-TCCCEEE-ECSSCCCHHHH
T ss_pred --------------------------CcEEEEe---CC---CCCCCHHHHHHHHHHHHHc-CCCeEEe-ecCCCcchHHH
Confidence 1112221 11 2346788999999999887 8765431 24678999999
Q ss_pred HHh--h-cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 013442 374 FAE--A-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYL 425 (443)
Q Consensus 374 ~~~--~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l~ 425 (443)
+.. . +|+++++.|. ..+|+|+|+++++++..+++++..++..+.
T Consensus 291 ~~~~~~gipt~~lg~~~--------~~~Hs~~E~~~~~d~~~~~~ll~~~~~~l~ 337 (348)
T 1ylo_A 291 VHLTGTGVPTLVMGPAT--------RHGHCAASIADCRDILQMEQLLSALIQRLT 337 (348)
T ss_dssp HHTSTTCCCEEEEECCC--------BSCSSSCEEEEHHHHHHHHHHHHHHHHTCC
T ss_pred HHHhcCCCCEEEECccc--------CcCCCcceEeeHHHHHHHHHHHHHHHHHhh
Confidence 954 3 9988765432 239999999999999999999999998765
No 40
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=99.79 E-value=6.3e-18 Score=160.92 Aligned_cols=120 Identities=14% Similarity=0.080 Sum_probs=104.8
Q ss_pred HHHHHHHHHHHhCCCCCc--------ccHHHHHHHHHHHHhCCCCeeeccc------CceEEEEECCC-CCcEEEEEEec
Q 013442 50 YWMVNIRRKIHENPELGF--------QEFETSKLIRAELDQMGIPYKFPVA------VTGVVGYIGTG-QPPFVALRADM 114 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~--------~E~~~~~~l~~~l~~~G~~~~~~~~------~~~via~~~~~-~~~~I~~~~H~ 114 (443)
+++++++++|++|||+|+ .|.++++||.++|+++|++++.... ++|+++++++. ++++|+|.+|+
T Consensus 7 ~~~~~~l~~L~~i~s~s~~~r~~~~~~e~~~~~~i~~~l~~~g~~v~~~~~~~~~~~~~nvi~~~~g~~~~~~i~l~aH~ 86 (284)
T 1tkj_A 7 ANVKAHLTQLSTIAANNGGNRAHGRPGYKASVDYVKAKLDAAGYTTTLQQFTSGGATGYNLIANWPGGDPNKVLMAGAHL 86 (284)
T ss_dssp HHHHHHHHHHHHHHHTTTTCCCTTSHHHHHHHHHHHHHHHHHTCEEEEEEEEETTEEEEEEEEECSCSEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHcccccCCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEEEeccCCCCceeEEEEEeCCCCCCEEEEEeec
Confidence 778999999999999986 6789999999999999999876422 56999999765 35899999999
Q ss_pred ccccCcccCCCccccCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchHHHHHHcC
Q 013442 115 DALAMEESVEWEHKSKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAG 186 (443)
Q Consensus 115 DtVp~~~~~~w~~~~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~~~~~g 186 (443)
|+||. |||+ |++++++|+++++|++.+..++++|.|+|+++|| |..|+++++++.
T Consensus 87 D~v~~-----------------g~Ga~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~g~~Gs~~~~~~~ 145 (284)
T 1tkj_A 87 DSVSS-----------------GAGINDNGSGSAAVLETALAVSRAGYQPDKHLRFAWWGAEELGLIGSKFYVNNL 145 (284)
T ss_dssp CCCTT-----------------SCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGTSHHHHHHHHHS
T ss_pred CCCCC-----------------CCCCccChHHHHHHHHHHHHHHhcCCCCCceEEEEEECCcccCCcCHHHHHhhC
Confidence 99994 4665 7899999999999999887899999999999999 678999998763
No 41
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=99.76 E-value=1.2e-16 Score=153.37 Aligned_cols=127 Identities=15% Similarity=0.163 Sum_probs=106.4
Q ss_pred HHHHHHHHHHHhCCC---CCcccHHHHHHHHHHHHhCCC--C-eeecc------cCceEEEEECCC--CCcEEEEEEecc
Q 013442 50 YWMVNIRRKIHENPE---LGFQEFETSKLIRAELDQMGI--P-YKFPV------AVTGVVGYIGTG--QPPFVALRADMD 115 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS---~s~~E~~~~~~l~~~l~~~G~--~-~~~~~------~~~~via~~~~~--~~~~I~~~~H~D 115 (443)
+++++++++|+++|+ .|+.|.++++||.++|+++|+ + ++.+. ...|+++++++. +.+.|+|.||+|
T Consensus 20 ~~~~~~l~~L~~i~sr~~~s~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~nvi~~~~g~~~~~~~v~l~aH~D 99 (299)
T 1rtq_A 20 SQITGTISSLESFTNRFYTTTSGAQASDWIASEWQALSASLPNASVKQVSHSGYNQKSVVMTITGSEAPDEWIVIGGHLD 99 (299)
T ss_dssp HHHHHHHHHHHTSSCCCTTSHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEETTEEEEEEEEEECCSSEEEEEEEEEEECC
T ss_pred HHHHHHHHHHhCcCCCCCCCchHHHHHHHHHHHHHHhcCCcccceeeeeccCCCCCceEEEEEECCCCCCCEEEEEeccc
Confidence 779999999999995 466788999999999999874 3 33321 247999999764 247899999999
Q ss_pred cccCcccCCCccccCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchHHHHHHc
Q 013442 116 ALAMEESVEWEHKSKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDA 185 (443)
Q Consensus 116 tVp~~~~~~w~~~~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~~~~~ 185 (443)
|||. .|.. +++||||+ |++++++|+++++|++.+..++++|.|+++++|| |..|+++++++
T Consensus 100 ~v~~----~~~~-----~~~~~~Ga~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~g~~Gs~~~~~~ 164 (299)
T 1rtq_A 100 STIG----SHTN-----EQSVAPGADDDASGIAAVTEVIRVLSENNFQPKRSIAFMAYAAEEVGLRGSQDLANQ 164 (299)
T ss_dssp CCSS----TTCC-----TTCCCCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGTSHHHHHHHHH
T ss_pred cCCC----cCcC-----CCcccCCCcccHHHHHHHHHHHHHHHHcCCCCCceEEEEEECCccCCchhHHHHHHh
Confidence 9982 5743 56899998 7999999999999999888899999999999999 77899998775
No 42
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=99.69 E-value=1.8e-15 Score=147.67 Aligned_cols=246 Identities=14% Similarity=0.085 Sum_probs=171.4
Q ss_pred HHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeecccCceEEEEECCC--CCcEEEEEEecccccC-----cc--
Q 013442 51 WMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG--QPPFVALRADMDALAM-----EE-- 121 (443)
Q Consensus 51 ~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~--~~~~I~~~~H~DtVp~-----~~-- 121 (443)
++++++++|+++||+|+.|.++++|+.++|+++|++++.+ ...|+++++++. ++|+|+|.||+|+|+. .+
T Consensus 4 ~~~~~l~~L~~ips~SG~E~~v~~~l~~~l~~~g~~~~~D-~~GNli~~~~g~~~~~~~v~l~aHmD~Vg~mV~~I~~~G 82 (355)
T 3kl9_A 4 TLFSKIKEVTELAAVSGHEAPVRAYLREKLTPHVDEVVTD-GLGGIFGIKHSEAVDAPRVLVASHMDEVGFMVSEIKPDG 82 (355)
T ss_dssp HHHHHHHHHHTSCCBTTCCHHHHHHHHHHHGGGSSEEEEC-TTSCEEEEECCCSTTCCEEEEEEECCBCEEEEEEECTTS
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCEEEEC-CCCeEEEEECCcCCCCCeEEEEeccccccceEEEECCCC
Confidence 5789999999999999999999999999999999998875 456999999764 3699999999999964 11
Q ss_pred ------cCCCccc--------------------------------------------------c----------------
Q 013442 122 ------SVEWEHK--------------------------------------------------S---------------- 129 (443)
Q Consensus 122 ------~~~w~~~--------------------------------------------------~---------------- 129 (443)
..+|... +
T Consensus 83 ~l~~~~iGG~~~~~~~~~~v~i~t~~g~~~~Gvig~~~~H~~~~~~~~~~~~~~~~~iD~g~~s~ee~~~~GI~~Gd~v~ 162 (355)
T 3kl9_A 83 TFRVVEIGGWNPMVVSSQRFKLLTRDGHEIPVISGSVPPHLTRGKGGPTMPAIADIVFDGGFADKAEAESFGIRPGDTIV 162 (355)
T ss_dssp CEEEEEESCCCTTTCSSCEEEEECTTSCEEEEEEC---------------CCGGGSCEECCCSSHHHHHHTTCCTTCEEE
T ss_pred EEEEEecCCccccccCCCEEEEEcCCCCEEEEEEeCccccccChhhccCCCChhhEEEEeccCCHHHHHHcCCCCCCEEE
Confidence 1233200 0
Q ss_pred -------CC-CCeeecCcc--hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchHHHHHHcCCCCccceeeEec
Q 013442 130 -------KV-PGKMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLH 198 (443)
Q Consensus 130 -------~~-~g~l~GrG~--kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~~~~~g~~~~~d~~i~~~ 198 (443)
.. ++.+.|+.- +.++++++.+++.+++. .++.++.++|+..|| |..|++..... . .+|.+|..+
T Consensus 163 ~d~~~~~~~~~~~i~s~~lDnr~g~~~~l~~l~~l~~~--~~~~~v~~~ft~qEEvG~~Ga~~a~~~-~--~pd~~i~~D 237 (355)
T 3kl9_A 163 PDSSAILTANEKNIISKAWDNRYGVLMVSELAEALSGQ--KLGNELYLGSNVQEEVGLRGAHTSTTK-F--DPEVFLAVD 237 (355)
T ss_dssp ECCCCEECTTSSEEEESCHHHHHHHHHHHHHHHHHSSC--CCSSEEEEEEESCCTTTSHHHHHHHHH-H--CCSEEEEEE
T ss_pred eccceEEecCCCEEEeeccccHHHHHHHHHHHHHhhhc--CCCceEEEEEECccccCcchhHHHHhc-c--CCCEEEEec
Confidence 01 134556665 47999999999998764 588999999999999 77787655321 1 223333211
Q ss_pred CCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEcCC
Q 013442 199 VSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGG 278 (443)
Q Consensus 199 ~~~~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gG~ 278 (443)
+ +|+..+
T Consensus 238 -------------------------~------~~a~d~------------------------------------------ 244 (355)
T 3kl9_A 238 -------------------------C------SPAGDV------------------------------------------ 244 (355)
T ss_dssp -------------------------E------EECCGG------------------------------------------
T ss_pred -------------------------C------ccCCCC------------------------------------------
Confidence 0 011110
Q ss_pred cCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcccCCHHHHHHHHHHHHHhcCCcc
Q 013442 279 AFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQN 358 (443)
Q Consensus 279 ~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~ 358 (443)
|+. ....|--+-+... .. ....|+.+.+.+++++++. |.+.
T Consensus 245 -----p~~-----------------------------~~~lg~G~~i~~~--d~--~~~~~~~l~~~l~~~a~~~-gIp~ 285 (355)
T 3kl9_A 245 -----YGG-----------------------------QGKIGDGTLIRFY--DP--GHLLLPGMKDFLLTTAEEA-GIKY 285 (355)
T ss_dssp -----GTS-----------------------------SCCTTSCEEEEEE--ET--TEECCHHHHHHHHHHHHHT-TCCE
T ss_pred -----CCc-----------------------------ccccCCCcEEEEe--cC--CCCCCHHHHHHHHHHHHHc-CCCE
Confidence 100 0001111222221 11 2356788999999999887 8865
Q ss_pred cccCCCCCCCchHHHHHh--h-cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 013442 359 IKENRPLMGTEDFSFFAE--A-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRY 424 (443)
Q Consensus 359 ~~~~~~~~g~tDa~~~~~--~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l 424 (443)
.. ...+|+||++.+.. . +|++.++++... .|+|.|+++++++..+++++..++.++
T Consensus 286 q~--~~~ggGtDa~~i~~a~~Gipt~~igvp~~~--------~Hs~~E~~~~~Di~~~~~ll~~~l~~l 344 (355)
T 3kl9_A 286 QY--YCGKGGTDAGAAHLKNGGVPSTTIGVCARY--------IHSHQTLYAMDDFLEAQAFLQALVKKL 344 (355)
T ss_dssp EE--EECSSCCTHHHHTTSTTCCCEEEEEEEEBS--------CSSSCEEEEHHHHHHHHHHHHHHHHTC
T ss_pred EE--ECCCcchHHHHHHHhCCCCCEEEEccCcCC--------CCCcceEeeHHHHHHHHHHHHHHHHHh
Confidence 43 33568999999864 3 999987776543 999999999999999999999988765
No 43
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=99.61 E-value=4.8e-14 Score=137.39 Aligned_cols=243 Identities=15% Similarity=0.098 Sum_probs=163.9
Q ss_pred HHHHHHHHHhCCCCCcccH-HHHHHHHHHHHhCCCCeeecccCceEEEEECCCCCcEEEEEEecccccC-----cc----
Q 013442 52 MVNIRRKIHENPELGFQEF-ETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAM-----EE---- 121 (443)
Q Consensus 52 ~i~ll~~l~~ipS~s~~E~-~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~~~~~I~~~~H~DtVp~-----~~---- 121 (443)
+++++++|+++||+|+.|. ++++|+.++|+++|++++.+ ...|+++++++.+ |+|+|.||+|+|+. .+
T Consensus 11 ~~~~l~~L~~ipspSG~E~~~v~~~l~~~l~~~g~~~~~D-~~GNvi~~~~g~~-~~v~l~aHmDtVg~mV~~I~~~G~l 88 (354)
T 2vpu_A 11 DWKLMQEIIEAPGVSGYEHLGIRDIVVDVLKEVADEVKVD-KLGNVIAHFKGSS-PRIMVAAHMDKIGVMVNHIDKDGYL 88 (354)
T ss_dssp CHHHHHHHHHSCCBTTCGGGTHHHHHHHHHHTTCSEEEEC-TTCCEEEEECCSS-SEEEEECCCCBCEEEEEEECTTSCE
T ss_pred HHHHHHHHHhCCCCCcccHHHHHHHHHHHHHHhCCEEEEc-CCCeEEEEEcCCC-CEEEEEecccccceeEEEECCCCEE
Confidence 5789999999999999999 99999999999999998875 4569999997654 99999999999964 11
Q ss_pred ----cCCCccc------------------------------c--------------------------------------
Q 013442 122 ----SVEWEHK------------------------------S-------------------------------------- 129 (443)
Q Consensus 122 ----~~~w~~~------------------------------~-------------------------------------- 129 (443)
..+|... .
T Consensus 89 ~~~~iGG~~~~~~~~~~v~i~t~~g~~~Gvi~~~~~H~~~~~~~~~~~~~~~~l~iD~g~~s~ee~~~~GI~~Gd~v~~d 168 (354)
T 2vpu_A 89 HIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQEDKGSKIDWDQIVVDVGASSKEEAEEMGFRVGTVGEFA 168 (354)
T ss_dssp EEEEESSCCGGGGTTCEEEEEETTEEEEEEECCCCSTTC---------CCGGGCCEECSCSSHHHHHHTTCCTTCEEEEC
T ss_pred EEEccCCcccccccCCEEEEEcCCCcEEEEEcCCCccccCcccccccCCCcceEEEEecCCCHHHHHhcCCCCCCEEEEe
Confidence 1233200 0
Q ss_pred -----CCCCeeecCcc--hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchHHHHHHcCCCCccceeeEecCCC
Q 013442 130 -----KVPGKMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSS 201 (443)
Q Consensus 130 -----~~~g~l~GrG~--kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~~~~~g~~~~~d~~i~~~~~~ 201 (443)
..++++.++.- +.++++++.+++.+++ ++.++.++|+..|| |..|++..... . ..|.+|..+
T Consensus 169 ~~~~~~~~~~i~s~~lDnr~g~~~~l~~l~~l~~----~~~~v~~~ft~qEEVG~~ga~~aa~~-i--~pd~~i~~D--- 238 (354)
T 2vpu_A 169 PNFTRLNEHRFATPYLDDRICLYAMIEAARQLGD----HEADIYIVGSVQEEVGLRGARVASYA-I--NPEVGIAMD--- 238 (354)
T ss_dssp CCCEECSSSEEECTTHHHHHHHHHHHHHHHHCCC----CSSEEEEEECSCCTTTSHHHHHHHHH-H--CCSEEEEEE---
T ss_pred eEEEEeCCceEEEecCccHHHHHHHHHHHHHhhc----CCCeEEEEEECCcccCccchhhhhcc-c--CCCEEEEec---
Confidence 01233445554 4688888888877753 77899999999999 77777654221 1 223333211
Q ss_pred CCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEcCCcCc
Q 013442 202 LFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFN 281 (443)
Q Consensus 202 ~~~~g~~~~~~g~~~~g~~~~~v~v~G~~aHss~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gG~~~n 281 (443)
+ +|+..|... .... ..+..|.
T Consensus 239 ----------------------v------~~a~dp~~~-------------------~~~~---------~~lg~Gp--- 259 (354)
T 2vpu_A 239 ----------------------V------TFAKQPHDK-------------------GKIV---------PELGKGP--- 259 (354)
T ss_dssp ----------------------E------EECCCTTST-------------------TCCC---------CCTTSCC---
T ss_pred ----------------------c------cccCCCCcc-------------------cccC---------ceECCcc---
Confidence 1 122222100 0000 0001111
Q ss_pred cccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcccCCHHHHHHHHHHHHHhcCCccccc
Q 013442 282 IIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKE 361 (443)
Q Consensus 282 ~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~ 361 (443)
+ +| . ....|+.+.+.+++++++. |.+....
T Consensus 260 v--------~d--------------------------------------~---~~~~~~~l~~~l~~~a~~~-gIp~q~~ 289 (354)
T 2vpu_A 260 V--------MD--------------------------------------V---GPNINPKLRAFADEVAKKY-EIPLQVE 289 (354)
T ss_dssp E--------EE--------------------------------------E---STTSCHHHHHHHHHHHHHT-TCCCEEE
T ss_pred e--------Ec--------------------------------------C---CCCCCHHHHHHHHHHHHHc-CCCcEEE
Confidence 0 01 0 1245778888888888887 8765432
Q ss_pred CCCCC-CCchHHHHHh--h-cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 013442 362 NRPLM-GTEDFSFFAE--A-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRY 424 (443)
Q Consensus 362 ~~~~~-g~tDa~~~~~--~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~~~l 424 (443)
...+ |+||++.+.. . +|++.+++|... .|+|.|+++++++..+++++..++.++
T Consensus 290 -~~~g~gGtDa~~i~~a~~Gipt~~Igvp~~~--------~Hs~~E~~~~~D~~~~~~ll~~~l~~l 347 (354)
T 2vpu_A 290 -PSPRPTGTDANVMQINKEGVATAVLSIPIRY--------MHSQVELADARDVDNTIKLAKALLEEL 347 (354)
T ss_dssp -ECCSCCSSTHHHHHTSTTCCEEEEEEEEEBS--------TTSTTCEEEHHHHHHHHHHHHHHHHHC
T ss_pred -eCCCCCccHHHHHHHhcCCCCEEEECccccc--------CcCcceEeeHHHHHHHHHHHHHHHHhc
Confidence 2234 7999998854 3 899887777543 999999999999999999999988765
No 44
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=99.60 E-value=2.1e-14 Score=137.71 Aligned_cols=131 Identities=15% Similarity=0.046 Sum_probs=107.1
Q ss_pred HHHHHHHHHHHhCCC---CCcccHHHHHHHHHHHHhCCCCeeecc-----------cCceEEEEECCCCCcEEEEEEecc
Q 013442 50 YWMVNIRRKIHENPE---LGFQEFETSKLIRAELDQMGIPYKFPV-----------AVTGVVGYIGTGQPPFVALRADMD 115 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS---~s~~E~~~~~~l~~~l~~~G~~~~~~~-----------~~~~via~~~~~~~~~I~~~~H~D 115 (443)
+.+.+.+++|+++.+ .|..+.++++||.++|+++|++++++. ...|+++++++.+.+.|++.+|+|
T Consensus 25 ~~~~~~l~~l~~~~~R~~~s~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~~g~~~~~~Nvia~~~g~~~~~ill~aH~D 104 (309)
T 3tc8_A 25 DSAYAYVANQVAFGPRVPNTAAHKACGDYLASELKRFGAKVYQQEAILTAYDGTKLEARNIIGSFDPENSKRVLLFAHWD 104 (309)
T ss_dssp HHHHHHHHHHHHTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTCSSEEEEEEECC
T ss_pred HHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEEeeccccCCCcccceEEEEEECCCCCceEEEEeccc
Confidence 668888888887644 356778999999999999999987632 137999999876568999999999
Q ss_pred cccCcccCCCccccCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-cc-------------ch
Q 013442 116 ALAMEESVEWEHKSKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG-------------GG 178 (443)
Q Consensus 116 tVp~~~~~~w~~~~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~-------------~G 178 (443)
+||.++.. ++. ..++++| +|+ +++++++|++++.|++.+ ++++|.|++.++|| |. .|
T Consensus 105 sv~~~~~~--p~~-~~~~~~~-~Ga~D~~sGva~~Le~ar~l~~~~--~~~~i~f~~~~~EE~Gl~~~~~~~~~ds~~~G 178 (309)
T 3tc8_A 105 SRPYSDHD--PDP-SKHRTPL-DGADDGGSGVGALLEIARQIGQKA--PGIGIDIIFFDAEDYGTPEFVTDYTPDSWCLG 178 (309)
T ss_dssp CCSCCTTC--SSG-GGTTSCC-CCTTTTHHHHHHHHHHHHHHHHSC--CSSEEEEEEECSCSCSCCTTCCSCCTTCSCHH
T ss_pred CCCCCCCC--ccc-cCCCccc-cCcccchHhHHHHHHHHHHHHhCC--CCCcEEEEEECccccccccccccccccccchh
Confidence 99977532 222 4567788 887 589999999999999874 89999999999999 76 89
Q ss_pred HHHHHHcC
Q 013442 179 AKKMLDAG 186 (443)
Q Consensus 179 ~~~~~~~g 186 (443)
++++.++.
T Consensus 179 S~~~~~~~ 186 (309)
T 3tc8_A 179 TQFWAKNP 186 (309)
T ss_dssp HHHHHHSC
T ss_pred HHHHHhCC
Confidence 99998753
No 45
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=99.57 E-value=3.6e-14 Score=136.10 Aligned_cols=131 Identities=15% Similarity=0.085 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHhCCCC---CcccHHHHHHHHHHHHhCCCCeeecc-----------cCceEEEEECCCCCcEEEEEEecc
Q 013442 50 YWMVNIRRKIHENPEL---GFQEFETSKLIRAELDQMGIPYKFPV-----------AVTGVVGYIGTGQPPFVALRADMD 115 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~---s~~E~~~~~~l~~~l~~~G~~~~~~~-----------~~~~via~~~~~~~~~I~~~~H~D 115 (443)
+.+++++++|+++++. |..+.++++||.++|+++|++++++. ...|++|++++.+.+.|+|.+|+|
T Consensus 27 ~~~~~~l~~L~~~~~R~~gs~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~~g~~~~~~Nvia~~~g~~~~~ill~aH~D 106 (314)
T 3gux_A 27 DSAYQYIQVQADFGPRVPNTQAHKECGEYLAGQLEKFGAKVYNQYADLIAYDGTILKSRNIIGAYKPESKKRILLCAHWD 106 (314)
T ss_dssp HHHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTCSSEEEEEEECC
T ss_pred HHHHHHHHHHHccCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeeccccCCCcccceEEEEEECCCCCceEEEEcccc
Confidence 7789999999998754 45678999999999999999987632 137999999876568999999999
Q ss_pred cccCcccCCCccccCCCCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-cc--------------c
Q 013442 116 ALAMEESVEWEHKSKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG--------------G 177 (443)
Q Consensus 116 tVp~~~~~~w~~~~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~--------------~ 177 (443)
+||.++.. ++ ...++. +++|+ +++++++|++++.|++.+ ++++|.|++.++|| |. .
T Consensus 107 sv~~~~~~--p~-~~~~~~-~~~GA~D~~sGva~~Le~ar~l~~~~--~~~~i~fv~~~~EE~Gl~~~~~~~~~~ds~~~ 180 (314)
T 3gux_A 107 SRPYADND--PD-PKNHHT-PILGVNDGASGVGVLLEIARQIQKEQ--PALGIDIVFFDSEDYGIPEFYDGKYKQDTWCL 180 (314)
T ss_dssp CCC------------------------CHHHHHHHHHHHHHHHHSC--CSSEEEEEEECSCCC-----------CTTSCH
T ss_pred CCCcCCCC--cc-cccCCc-ccCCCcccHHHHHHHHHHHHHHHhCC--CCCcEEEEEECCccccccccccccccccccch
Confidence 99976521 21 122343 55887 689999999999999864 89999999999999 76 8
Q ss_pred hHHHHHHcC
Q 013442 178 GAKKMLDAG 186 (443)
Q Consensus 178 G~~~~~~~g 186 (443)
|++++.++.
T Consensus 181 GS~~~~~~~ 189 (314)
T 3gux_A 181 GSQYWARTP 189 (314)
T ss_dssp HHHHHHHSC
T ss_pred hHHHHHhCC
Confidence 999998753
No 46
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=99.51 E-value=4.6e-13 Score=129.61 Aligned_cols=243 Identities=18% Similarity=0.157 Sum_probs=159.8
Q ss_pred HHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeecccCceEEEEECCCCCcEEEEEEecccccC-----cc----
Q 013442 51 WMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAM-----EE---- 121 (443)
Q Consensus 51 ~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~~~~~I~~~~H~DtVp~-----~~---- 121 (443)
.+.+++++|+++||+|+.|.++++|+.++++++|.+++.+ ...|+++++++ ++|+|+|.||||+|.. .+
T Consensus 12 ~~~~~l~~L~~~pspSG~E~~v~~~i~~~l~~~~~e~~~D-~~Gnvi~~~g~-~~~~v~l~aHmDevG~mV~~I~~~G~l 89 (343)
T 3isx_A 12 HMKELIRKLTEAFGPSGREEEVRSIILEELEGHIDGHRID-GLGNLIVWKGS-GEKKVILDAHIDEIGVVVTNVDDKGFL 89 (343)
T ss_dssp CCHHHHHHHHHSCCBTTCCHHHHHHHHHHHTTTCSEEEEC-TTCCEEEEECC-CSSEEEEEEECCBCEEEEEEECTTSCE
T ss_pred HHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHhCCEEEEC-CCCCEEEEECC-CCCEEEEEecccccceEEEEECCCCeE
Confidence 4678999999999999999999999999999999988765 45689999854 4699999999999943 11
Q ss_pred ----cCCCccc----------------------------------------------c-------C--------------
Q 013442 122 ----SVEWEHK----------------------------------------------S-------K-------------- 130 (443)
Q Consensus 122 ----~~~w~~~----------------------------------------------~-------~-------------- 130 (443)
..+|... + +
T Consensus 90 ~~~~vGG~~~~~~~~~~v~i~t~~~Gvig~~~~H~~~~~~~~~~~~~~~l~iD~g~~s~ee~~~~I~vGd~v~~~~~~~~ 169 (343)
T 3isx_A 90 TIEPVGGVSPYMLLGKRIRFENGTIGVVGMEGETTEERQENVRKLSFDKLFIDIGANSREEAQKMCPIGSFGVYDSGFVE 169 (343)
T ss_dssp EEEEESSCCHHHHTTCEEEETTSCEEEEEECCCSHHHHHHHHHTCCGGGEEEECSCSSHHHHHHHSCTTCEEEESCCCEE
T ss_pred EEEecCCcCccccCCcEEEEeccEEEEEecccccccChhhcccCCCcceEEEEeCCCCHHHHHhcCCCCCEEEecCceEE
Confidence 1234200 0 0
Q ss_pred CCCeeecCcc--hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchHHHHHHcCCCCccceeeEecCCCCCCCce
Q 013442 131 VPGKMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLFPVGT 207 (443)
Q Consensus 131 ~~g~l~GrG~--kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~~~~~g~~~~~d~~i~~~~~~~~~~g~ 207 (443)
-++++.|++- +.++++++.+++.++. +.++.++|+..|| |..|++..... . .+|.+|..+
T Consensus 170 ~~~~i~s~~lDdR~g~~~~l~~l~~l~~-----~~~~~~~ft~qEEVG~~Ga~~aa~~-i--~pd~~i~vD--------- 232 (343)
T 3isx_A 170 VSGKYVSKAMDDRIGCAVIVEVFKRIKP-----AVTLYGVFSVQEEVGLVGASVAGYG-V--PADEAIAID--------- 232 (343)
T ss_dssp ETTEEEESCHHHHHHHHHHHHHHHHCCC-----SSEEEEEEECCCCTTSCCSTTTGGG-C--CCSEEEEEE---------
T ss_pred eccEEEeccCccHHHHHHHHHHHHhccC-----CCeEEEEEECCcccCchhHHHHhhc-C--CCCEEEEEe---------
Confidence 0144556665 4788888888777642 6899999999999 77777543110 1 123332211
Q ss_pred EEeecCcccccceEEEEEEEecCCCCCC-CCCCCcHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEcCCcCccccCc
Q 013442 208 VASRPGPTLAAGGFFEAVINGKGGHAAI-PQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDS 286 (443)
Q Consensus 208 ~~~~~g~~~~g~~~~~v~v~G~~aHss~-p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gG~~~n~vP~~ 286 (443)
+ +|+.. |....+ ....
T Consensus 233 ----------------v------~~a~d~p~~~~~------------------~~~~----------------------- 249 (343)
T 3isx_A 233 ----------------V------TDSADTPKAIKR------------------HAMR----------------------- 249 (343)
T ss_dssp ----------------E------EECCCSTTCCCT------------------TCCC-----------------------
T ss_pred ----------------C------cCCCCCCCcccc------------------cccc-----------------------
Confidence 1 11211 210000 0000
Q ss_pred EEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcccCCHHHHHHHHHHHHHhcCCcccccCCCCC
Q 013442 287 VTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLM 366 (443)
Q Consensus 287 a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~ 366 (443)
.|--.-+.. ... ....|+.+.+.+++++++. |.+.... ...+
T Consensus 250 --------------------------------lg~GpvI~~--~d~--~~~~d~~l~~~l~~~A~~~-gIp~Q~~-v~~g 291 (343)
T 3isx_A 250 --------------------------------LSGGPALKV--KDR--ASISSKRILENLIEIAEKF-DIKYQME-VLTF 291 (343)
T ss_dssp --------------------------------TTSCCEEEC--BTT--CCHHHHHHHHHHHHHHHHT-TCCCEEC-CCBC
T ss_pred --------------------------------cCCCcEEEE--cCC--CCCCCHHHHHHHHHHHHHC-CCCeEEe-cCCC
Confidence 011111222 111 1234677888888888887 8766432 2346
Q ss_pred CCchHHHHHh--h-cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHH
Q 013442 367 GTEDFSFFAE--A-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLA 421 (443)
Q Consensus 367 g~tDa~~~~~--~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~~~~~~a~~~ 421 (443)
|+||++.+.. . +|++.+++|..+ .|+|.|+++++++..+++++..++
T Consensus 292 gGTDa~~i~~a~~Gipt~~Igvp~r~--------~Hs~~E~~~~~Di~~~~~ll~~~l 341 (343)
T 3isx_A 292 GGTNAMGYQRTREGIPSATVSIPTRY--------VHSPSEMIAPDDVEATVDLLIRYL 341 (343)
T ss_dssp CCSSHHHHHHHTSSCCEEEEEEEEBS--------TTSTTEEECHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHhcCCCCEEEEcccccc--------ccchhhEecHHHHHHHHHHHHHHH
Confidence 8999988754 3 999988888653 999999999999999999998875
No 47
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=99.50 E-value=1e-13 Score=134.41 Aligned_cols=126 Identities=13% Similarity=0.199 Sum_probs=100.4
Q ss_pred HHH-HHHHHHHHhCCCC-CcccHHHHHHHHHHHHh--CCCCeeecc----------cCceEEEEECCCCCcEEEEEEecc
Q 013442 50 YWM-VNIRRKIHENPEL-GFQEFETSKLIRAELDQ--MGIPYKFPV----------AVTGVVGYIGTGQPPFVALRADMD 115 (443)
Q Consensus 50 ~~~-i~ll~~l~~ipS~-s~~E~~~~~~l~~~l~~--~G~~~~~~~----------~~~~via~~~~~~~~~I~~~~H~D 115 (443)
+++ .+++++|+..+.. +..+.++++||.++|++ .|++++.+. ...|++|++++.+.+.|++.||+|
T Consensus 31 ~~~~~~~l~~L~~~r~~~s~~~~~~~~~l~~~l~~~~~G~~v~~~~~~~~~~~g~~~~~Nvi~~~~g~~~~~i~l~aH~D 110 (329)
T 2afw_A 31 SEMWQNDLQPLLIERYPGSPGSYAARQHIMQRIQRLQADWVLEIDTFLSQTPYGYRSFSNIISTLNPTAKRHLVLACHYD 110 (329)
T ss_dssp HHHHHHTTGGGCSCCCTTSHHHHHHHHHHHHHHHTSSSCCEEEEEEEEECCTTSSEEEEEEEEESSTTSSEEEEEEEECC
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHhhCCCCEEEEEEEEecCCCCCceEeEEEEEECCCCCcEEEEEEecc
Confidence 668 8888999755544 34556899999999999 999887632 147999999776568999999999
Q ss_pred cccCcccCCCccccCCCCeeecCcc---hHHHHHHHHHHHHHHcc--------cccCCceEEEEEeccCCc--------c
Q 013442 116 ALAMEESVEWEHKSKVPGKMHACGH---DAHVAMLLGAAKMLQVF--------RHEIKGTIVLVFQPAEEG--------G 176 (443)
Q Consensus 116 tVp~~~~~~w~~~~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~--------~~~l~~~i~~i~~~dEEg--------~ 176 (443)
+||.+ .|. +++ |+|+ +++++++|++++.|++. +..++++|.|++..+||. +
T Consensus 111 sv~~~---~~~------~~~-~~Ga~D~~sGva~~le~ar~l~~~~~~~~~~~g~~~~~~i~~~~~~~EE~~~~~~~~~g 180 (329)
T 2afw_A 111 SKYFS---HWN------NRV-FVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQLIFFDGEEAFLHWSPQDS 180 (329)
T ss_dssp CCCCC---CBT------TBC-CCCTTTTHHHHHHHHHHHHHTHHHHHTTC------CCEEEEEEEESCCSCSSSCCSSSS
T ss_pred CCCcC---ccc------CcC-CCCcccchhhHHHHHHHHHHHHHHHhhhcccccCCCCccEEEEEecCcccccccCCCcc
Confidence 99976 452 554 8998 68999999999999876 357899999999999995 3
Q ss_pred -chHHHHHHc
Q 013442 177 -GGAKKMLDA 185 (443)
Q Consensus 177 -~G~~~~~~~ 185 (443)
.|+++++++
T Consensus 181 l~Gs~~~~~~ 190 (329)
T 2afw_A 181 LYGSRHLAAK 190 (329)
T ss_dssp CHHHHHHHHH
T ss_pred chhHHHHHHH
Confidence 699988764
No 48
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=99.21 E-value=2.7e-10 Score=109.40 Aligned_cols=131 Identities=16% Similarity=0.132 Sum_probs=99.4
Q ss_pred HHHHHHHHHHHhC-C--CCCcccHHHHHHHHHHHHhCCCCeeec-------c----cCceEEEEECCCCCcEEEEEEecc
Q 013442 50 YWMVNIRRKIHEN-P--ELGFQEFETSKLIRAELDQMGIPYKFP-------V----AVTGVVGYIGTGQPPFVALRADMD 115 (443)
Q Consensus 50 ~~~i~ll~~l~~i-p--S~s~~E~~~~~~l~~~l~~~G~~~~~~-------~----~~~~via~~~~~~~~~I~~~~H~D 115 (443)
+.+.+.++.++++ | ..|....++++||.++|+++|++++.. . ...|+|+++++...+.|++.+|+|
T Consensus 25 ~~a~~~l~~l~~fgpR~~gS~~~~~a~~~i~~~l~~~g~~v~~q~~~~~~~~~~~~~~~Nii~~~~g~~~~~i~l~aH~D 104 (309)
T 4fuu_A 25 DSAYLYVKNQVDFGPRVPNTKEHVACGNYLAGKLEAFGAKVTNQYADLIAYDGTLLKARNIIGSYKPESKKRIALFAHWD 104 (309)
T ss_dssp HHHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTCSSEEEEEEECC
T ss_pred HHHHHHHHHHhCcCCcCCCCHHHHHHHHHHHHHHHHcCCeeEEEeEEeccCCCCcceeEEEEEEECCCCCceEEEEeecC
Confidence 6788888888875 3 334455789999999999999998652 1 135899999877668999999999
Q ss_pred cccCcccCCCccccCCCCeeecCcc-h--HHHHHHHHHHHHHHcccccCCceEEEEEeccCC-cc--------------c
Q 013442 116 ALAMEESVEWEHKSKVPGKMHACGH-D--AHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG--------------G 177 (443)
Q Consensus 116 tVp~~~~~~w~~~~~~~g~l~GrG~-k--g~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~--------------~ 177 (443)
++|.++...... ++.....|+ | +++|++|+++++|++. +++++|.|+|..+|| |. .
T Consensus 105 s~~~~~~~~~~~----~~~~~~~GA~D~aSG~a~lLE~ar~l~~~--~~~~~i~~~~~~~EE~Gl~~~~~~~~~~~~~l~ 178 (309)
T 4fuu_A 105 TRPWADNDADEK----NHHTPILGANDGASGVGALLEIARLVNQQ--QPELGIDIIFLDAEDYGTPQFYEGKHKEEAWCL 178 (309)
T ss_dssp CCSCCTTCSSGG----GTTSCCCCTTTTHHHHHHHHHHHHHHHHS--CCSSEEEEEEECSSSCCCCTTCCSCCCGGGSCH
T ss_pred CCCCCCCccccc----cccCCcCCcccCchhHHHHHHHHHHHhhc--CCCCceEEEeecccccCccccccchhhhhhhhc
Confidence 998765322111 122344676 2 6999999999999875 688999999999999 53 5
Q ss_pred hHHHHHHcC
Q 013442 178 GAKKMLDAG 186 (443)
Q Consensus 178 G~~~~~~~g 186 (443)
|++++.++.
T Consensus 179 GS~~~~~~~ 187 (309)
T 4fuu_A 179 GSQYWSRNP 187 (309)
T ss_dssp HHHHHHHSC
T ss_pred chhHHHhcc
Confidence 888887753
No 49
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=99.19 E-value=6.6e-11 Score=113.97 Aligned_cols=125 Identities=18% Similarity=0.221 Sum_probs=94.3
Q ss_pred HHHHH-HHHHH-HhCCCCCcccHHHHHHHHHHHHhC--CCCeeeccc----------CceEEEEECCCCCcEEEEEEecc
Q 013442 50 YWMVN-IRRKI-HENPELGFQEFETSKLIRAELDQM--GIPYKFPVA----------VTGVVGYIGTGQPPFVALRADMD 115 (443)
Q Consensus 50 ~~~i~-ll~~l-~~ipS~s~~E~~~~~~l~~~l~~~--G~~~~~~~~----------~~~via~~~~~~~~~I~~~~H~D 115 (443)
+.+.+ +|+.+ ......|..+.++++||.++|+++ |++++.+.. ..|++|++++...+.|++.+|+|
T Consensus 39 ~~~~~~~L~~~~~~R~~gS~~~~~a~~~l~~~l~~~~~g~~v~~d~f~~~~~~g~~~~~Nvia~~~g~~~~~ivl~aH~D 118 (330)
T 3pb6_X 39 QRLWSTYLRPLLVVRTPGSPGNLQVRKFLEATLRSLTAGWHVELDPFTASTPLGPVDFGNVVATLDPRAARHLTLACHYD 118 (330)
T ss_dssp HHHHHHTTGGGCSCCCTTSHHHHHHHHHHHHHHHHSTTCCEEEEEEEEEEETTEEEEEEEEEEESCTTSSEEEEEEEECC
T ss_pred HHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhCCCCeEEEEeeecccccCCccceEEEEEECCCCCceEEEEeccC
Confidence 44444 45554 333444556688999999999999 888776321 26999999876558999999999
Q ss_pred cccCcccCCCccccCCCCeeecCcc---hHHHHHHHHHHHHHHcc-----cccCCceEEEEEeccCCc--------c-ch
Q 013442 116 ALAMEESVEWEHKSKVPGKMHACGH---DAHVAMLLGAAKMLQVF-----RHEIKGTIVLVFQPAEEG--------G-GG 178 (443)
Q Consensus 116 tVp~~~~~~w~~~~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~-----~~~l~~~i~~i~~~dEEg--------~-~G 178 (443)
+|+..+ |.-...|+ .+|++++|+++++|++. +..++++|.|++..+||+ + .|
T Consensus 119 sv~~~~-----------g~~~~~GA~D~asGva~lLe~ar~l~~~~~~~~~~~~~~~i~fv~~~~EE~f~~w~~~~gl~G 187 (330)
T 3pb6_X 119 SKLFPP-----------GSTPFVGATDSAVPCALLLELAQALDLELSRAKKQAAPVTLQLLFLDGEEALKEWGPKDSLYG 187 (330)
T ss_dssp CCCCCT-----------TSCCCCCTTTTHHHHHHHHHHHHHTHHHHHHHHHTTCSEEEEEEEESCCSCSSCCSTTSSCHH
T ss_pred CCCCCC-----------CCcCcCCCcCChHHHHHHHHHHHHHHHHHhhcccCCCCCcEEEEEEcCcccccccCCCCCCcc
Confidence 997421 11245676 37999999999999874 357899999999999996 5 79
Q ss_pred HHHHHHc
Q 013442 179 AKKMLDA 185 (443)
Q Consensus 179 ~~~~~~~ 185 (443)
+++++++
T Consensus 188 S~~~a~~ 194 (330)
T 3pb6_X 188 SRHLAQL 194 (330)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9988763
No 50
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=99.13 E-value=9.2e-10 Score=106.49 Aligned_cols=134 Identities=20% Similarity=0.246 Sum_probs=99.2
Q ss_pred HHHHHHHHHHHhCCCCC--cccHHHHHHHHHHHHhCCCCeeecc-----------cCceEEEEECCCCCcEEEEEEeccc
Q 013442 50 YWMVNIRRKIHENPELG--FQEFETSKLIRAELDQMGIPYKFPV-----------AVTGVVGYIGTGQPPFVALRADMDA 116 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s--~~E~~~~~~l~~~l~~~G~~~~~~~-----------~~~~via~~~~~~~~~I~~~~H~Dt 116 (443)
..+.++++.|. +|-.. ....++++||.++|+++|++++... ...|+||+++++..+.|++.+|+|+
T Consensus 38 ~~~~~~l~~il-~pR~~Gs~~~~~~~~~i~~~l~~~g~~v~~q~f~~~~~~~~~~~~~Nii~~~~~~~~~~i~l~aHyDs 116 (330)
T 4fai_A 38 LHLREAIDKIL-IPRVVGTTNHSIVREYIVQSLRDLDWDVEVNSFHDHAPIKGKLHFHNIIATLNPNAERYLVLSCHYDS 116 (330)
T ss_dssp HHHHHHHHHHC-SCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTEEEEEEEEEEESCTTCSEEEEEEEECCC
T ss_pred HHHHHHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHCCCEEEEeeeeeecCCCCceeEEEEEEEECCCCCcEEEEEEeecc
Confidence 55666677663 46554 4457899999999999999987521 1358999998765578999999999
Q ss_pred ccCcccCCCccccCCCCeeecCcc-h--HHHHHHHHHHHHHHc---ccccCCceEEEEEeccCC-cc--------chHHH
Q 013442 117 LAMEESVEWEHKSKVPGKMHACGH-D--AHVAMLLGAAKMLQV---FRHEIKGTIVLVFQPAEE-GG--------GGAKK 181 (443)
Q Consensus 117 Vp~~~~~~w~~~~~~~g~l~GrG~-k--g~~a~~l~a~~~l~~---~~~~l~~~i~~i~~~dEE-g~--------~G~~~ 181 (443)
++..+. ...|+ | +|+|++|+++++|++ .+..++++|.|++..+|| |. .|+++
T Consensus 117 ~~~~~~-------------~~~GA~DnasG~A~lLE~Ar~l~~~~~~~~~p~rtI~fv~fdgEE~Gl~~~~~~~llGS~~ 183 (330)
T 4fai_A 117 KYMPGV-------------EFLGATDSAVPCAMLLNLAQVLQEQLKPLKKSKLSLMLLFFDGEEAFEEWGPKDSIYGARH 183 (330)
T ss_dssp CCCTTS-------------CCCCTTTTHHHHHHHHHHHHHTHHHHGGGGTSSEEEEEEEESCCSCSSSCBTTBSCHHHHH
T ss_pred cccccC-------------CCCCCCCccHhHHHHHHHHHHHHHhhhccCCCCccEEEEEeccccccccccccchhhhhHH
Confidence 975431 13576 2 699999999999975 345789999999999999 52 59999
Q ss_pred HHHc----CCCCccceeeEe
Q 013442 182 MLDA----GALENVEAIFGL 197 (443)
Q Consensus 182 ~~~~----g~~~~~d~~i~~ 197 (443)
+.++ +..+++.+.+.+
T Consensus 184 ~a~~~~~~~~~~~i~~~inl 203 (330)
T 4fai_A 184 LAKKWHHEGKLDRIDMLVLL 203 (330)
T ss_dssp HHHHHHHTTCSTTEEEEEEE
T ss_pred HHhcchhccchhceeEEEEe
Confidence 8874 233455555544
No 51
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=99.11 E-value=6.9e-10 Score=106.71 Aligned_cols=123 Identities=21% Similarity=0.253 Sum_probs=92.7
Q ss_pred HHHHHHHHHHHhCCCCCc--ccHHHHHHHHHHHHhCCCCeeecc-----------cCceEEEEECCCCCcEEEEEEeccc
Q 013442 50 YWMVNIRRKIHENPELGF--QEFETSKLIRAELDQMGIPYKFPV-----------AVTGVVGYIGTGQPPFVALRADMDA 116 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~--~E~~~~~~l~~~l~~~G~~~~~~~-----------~~~~via~~~~~~~~~I~~~~H~Dt 116 (443)
..+-++|+.++ +|.+.+ ...++++||.++|+++|++++... ...||||++++...+.|++.+|+|+
T Consensus 11 ~~~~~~l~~il-~PR~~gs~~~~~~~~~i~~~l~~~g~~v~~~~f~~~~~~~~~~~~~Nii~~~~~~~~~~vvl~aHyDs 89 (312)
T 4f9u_A 11 VHFNRTLDSIL-VPRVVGSRGHQQVREYLVQSLNGLGFQTEVDEFKQRVPVFGELTFANVVGTINPQAQNFLALACHYDS 89 (312)
T ss_dssp HHHHHHHHHHC-SCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTEEEEEEEEEEEESTTSSEEEEEEEECCC
T ss_pred HHHHHHHHHhc-CCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEeEEEecCCCCceeEEEEEEEECCCCCceEEEEEEEec
Confidence 33445555553 465544 457899999999999999987621 1259999998776689999999999
Q ss_pred ccCcccCCCccccCCCCeeecCcc---hHHHHHHHHHHHHHHcc-----cccCCceEEEEEeccCC-c--------cchH
Q 013442 117 LAMEESVEWEHKSKVPGKMHACGH---DAHVAMLLGAAKMLQVF-----RHEIKGTIVLVFQPAEE-G--------GGGA 179 (443)
Q Consensus 117 Vp~~~~~~w~~~~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~-----~~~l~~~i~~i~~~dEE-g--------~~G~ 179 (443)
++.++. . -..|+ -+|+|++|+++++|.+. +..++++|.|++..+|| | ..|+
T Consensus 90 ~~~~~~----------~--~~~GA~DnaSGvA~lLElAR~l~~~~~~~~~~~p~~tI~fv~fdaEE~G~~~~~~~~L~GS 157 (312)
T 4f9u_A 90 KYFPND----------P--GFVGATDSAVPCAILLNTAKTLGAYLQKEFRNRSDVGLMLIFFDGEEAFKEWTDADSVYGS 157 (312)
T ss_dssp CCCTTC----------T--TCCCTTTTHHHHHHHHHHHHHTHHHHTTGGGSCSSEEEEEEEESCCSCSSSCSSSSSCHHH
T ss_pred CCCCCC----------C--CCCCccCCcccHHHHHHHHHHHHHHHHhhccCCCCceEEEEEecCccccccCCccccccCh
Confidence 875431 1 13566 26999999999999752 44689999999999999 5 4699
Q ss_pred HHHHHc
Q 013442 180 KKMLDA 185 (443)
Q Consensus 180 ~~~~~~ 185 (443)
+++.++
T Consensus 158 ~~~a~~ 163 (312)
T 4f9u_A 158 KHLAAK 163 (312)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988775
No 52
>1q7l_B Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=99.08 E-value=1.4e-10 Score=89.61 Aligned_cols=77 Identities=14% Similarity=0.118 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhh-cCcEEEEecCCCCCCCCC--CCCCCCCCCCCCCchHHHHHHH
Q 013442 341 NLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKF--ETGHSPYFRVNEDALPYGAALH 417 (443)
Q Consensus 341 ~~~~~~~~~~~~~~g~~~~~~~~~~~g~tDa~~~~~~-ip~~~~~~G~~~~~pG~~--~~~H~p~E~i~i~~l~~~~~~~ 417 (443)
++++.++++++++ |.++. +..++|+||+++|.+. +|++. || ||.. ..+|++||+|+++++.+++++|
T Consensus 2 ~~v~~l~~a~~~~-g~~~~--~~~~~g~TDar~~~~~gip~v~--fG-----Pg~~~~~~~H~~dE~v~i~~l~~~~~iy 71 (88)
T 1q7l_B 2 PWWAAFSRVCKDM-NLTLE--PEIMPAAGDNRYIRAVGVPALG--FS-----PMNRTPVLLHDHDERLHEAVFLRGVDIY 71 (88)
T ss_dssp HHHHHHHHHHHHT-TCCEE--EEECCSCSHHHHHHHTTCCEEE--EC-----CCCSCCCCTTSTTCEEEHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHc-CCeeE--eeeeceeCcHHHHHHcCCCEEE--EC-----CCCCCcccccCCCCeeEHHHHHHHHHHH
Confidence 5789999999998 87763 4578999999999876 88654 56 3332 4799999999999999999999
Q ss_pred HHHHHHHHhh
Q 013442 418 ASLATRYLLE 427 (443)
Q Consensus 418 a~~~~~l~~~ 427 (443)
+.++.++++.
T Consensus 72 ~~~i~~~~~~ 81 (88)
T 1q7l_B 72 TRLLPALASV 81 (88)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHHcC
Confidence 9999999964
No 53
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=98.95 E-value=1.2e-08 Score=102.58 Aligned_cols=100 Identities=24% Similarity=0.251 Sum_probs=77.7
Q ss_pred HHHHHHHHHHHHhCC-CCeee--------cccCceEEEEECCCC--CcEEEEEEecccccCcccCCCccccCCCCeeecC
Q 013442 70 FETSKLIRAELDQMG-IPYKF--------PVAVTGVVGYIGTGQ--PPFVALRADMDALAMEESVEWEHKSKVPGKMHAC 138 (443)
Q Consensus 70 ~~~~~~l~~~l~~~G-~~~~~--------~~~~~~via~~~~~~--~~~I~~~~H~DtVp~~~~~~w~~~~~~~g~l~Gr 138 (443)
.+.++.|.+.++.-. +.++. .....|+++++++.. .+.|++.+|+|+++. |+
T Consensus 203 ~~da~~L~~~l~~g~~~~v~l~~~~~~~~~~~~~Nvi~~~~g~~~~~~~i~~~aH~Ds~~~-----------------g~ 265 (444)
T 3iib_A 203 NPDADLINAMLKRDKEVVISLELGSERRGETTSYNVIAEVKGSTKADEIVLIGAHLDSWDE-----------------GT 265 (444)
T ss_dssp HHHHHHHHHHHTTTCCCEEEEEEEEEEEEEEEEEEEEEEECCSTEEEEEEEEEEECCCCSS-----------------SC
T ss_pred HHHHHHHHHHHhCCCCeEEEEEEeeeEcCCceeEEEEEEEeCCCCCCCEEEEEeecccCCC-----------------CC
Confidence 355677777776421 22222 112469999997753 478999999999983 35
Q ss_pred cc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchHHHHHHcC
Q 013442 139 GH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAG 186 (443)
Q Consensus 139 G~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~~~~~g 186 (443)
|+ +++++++|++++.|++.+..++++|.|++.++|| |..|+++++++.
T Consensus 266 Ga~D~~sG~a~~le~a~~l~~~~~~~~~~i~f~~~~~EE~gl~Gs~~~~~~~ 317 (444)
T 3iib_A 266 GAIDDGAGVAIVTAAAKHILDLPQKPERTIRVVLYAAEELGLLGGKTYAKEH 317 (444)
T ss_dssp CTTTTHHHHHHHHHHHHHHHTSSSCCSEEEEEEEESCGGGTSHHHHHHHHHT
T ss_pred CCccchHHHHHHHHHHHHHHhcCCCCCCeEEEEEECCcccCCcCHHHHHHhh
Confidence 55 5799999999999999888899999999999999 779999998864
No 54
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=98.62 E-value=1.2e-07 Score=94.82 Aligned_cols=96 Identities=18% Similarity=0.206 Sum_probs=73.6
Q ss_pred HHHHHHHHHHH---h--CCCCeeecc----cCceEEEEECCC-----CCcEEEEEEecccccCcccCCCccccCCCCeee
Q 013442 71 ETSKLIRAELD---Q--MGIPYKFPV----AVTGVVGYIGTG-----QPPFVALRADMDALAMEESVEWEHKSKVPGKMH 136 (443)
Q Consensus 71 ~~~~~l~~~l~---~--~G~~~~~~~----~~~~via~~~~~-----~~~~I~~~~H~DtVp~~~~~~w~~~~~~~g~l~ 136 (443)
+.+++|.++++ + .+++++.+. ...|+++++++. +.+.|++.+|+|+|+.
T Consensus 172 ~~a~~L~~~l~~~~~g~~~v~l~~~~~~~~~~~Nvi~~~~g~~~~~~~~~~v~~~aH~D~v~~----------------- 234 (421)
T 2ek8_A 172 QEGDALAANLRAGEKITATVKVAGAEVKTLTSHNVIATKKPDANKKNTNDIIIIGSHHDSVEK----------------- 234 (421)
T ss_dssp HHHHHHHHHHHTTCCCEEEEEEESCEEEEEEEEEEEEEECCCSSTTCCCCEEEEEEECCCCTT-----------------
T ss_pred HHHHHHHHHhhhhccCCccccccccccccccccceEEEecCcccCCCCCCEEEEecccccCCC-----------------
Confidence 45777888883 2 122222211 146999999763 3589999999999983
Q ss_pred cCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC-ccchHHHHHHc
Q 013442 137 ACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDA 185 (443)
Q Consensus 137 GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~~~~~ 185 (443)
|+|+ +++++++|++++.|++. .++++|.|++.++|| |..|+++++++
T Consensus 235 g~Ga~D~~~G~a~~le~~~~l~~~--~~~~~i~~~~~~~EE~g~~Gs~~~~~~ 285 (421)
T 2ek8_A 235 APGANDDASGVAVTLELARVMSKL--KTDTELRFITFGAEENGLIGSKKYAAS 285 (421)
T ss_dssp CCCTTTTHHHHHHHHHHHHHHTTS--CCSSEEEEEEESSSTTTSHHHHHHHTT
T ss_pred CCCCCCCcHhHHHHHHHHHHHhcc--CCCceEEEEEECCccccchhHHHHHHh
Confidence 4666 58999999999999874 578999999999999 77899999875
No 55
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=97.94 E-value=2.7e-05 Score=81.17 Aligned_cols=78 Identities=22% Similarity=0.267 Sum_probs=63.7
Q ss_pred CceEEEEECCC--CCcEEEEEEecccccCcccCCCccccCCCCeeecCcchHHHHHHHHHHHHHHcc----cccCCceEE
Q 013442 93 VTGVVGYIGTG--QPPFVALRADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVF----RHEIKGTIV 166 (443)
Q Consensus 93 ~~~via~~~~~--~~~~I~~~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~kg~~a~~l~a~~~l~~~----~~~l~~~i~ 166 (443)
-.|++|++++. +.+.|++.+|+|++.+|.. .-.+|++++|+++++|++. +++++++|+
T Consensus 266 ~~NVi~~i~G~~~~~~~vvvgaH~Ds~~~Ga~----------------D~~sG~a~lLe~ar~l~~~~~~~g~~p~r~I~ 329 (640)
T 3kas_A 266 ILNIFGVIKGFVEPDHYVVVGAQRDAWGPGAA----------------KSGVGTALLLKLAQMFSDMVLKDGFQPSRSII 329 (640)
T ss_dssp EEEEEEEECCSSEEEEEEEEEEECCCSSCCTT----------------TTHHHHHHHHHHHHHHHHHHHTSCCCCSEEEE
T ss_pred EEEEEEEEeCCcCCCCceeeecccCCCCCCCC----------------cCcHHHHHHHHHHHHHHHhhhhcCCCCCCcEE
Confidence 46899999776 3478999999999853210 1146999999999999864 678999999
Q ss_pred EEEeccCC-ccchHHHHHHcC
Q 013442 167 LVFQPAEE-GGGGAKKMLDAG 186 (443)
Q Consensus 167 ~i~~~dEE-g~~G~~~~~~~g 186 (443)
|++..+|| |..|+.+++++.
T Consensus 330 f~~~~~EE~gl~GS~~~~~~~ 350 (640)
T 3kas_A 330 FASWSAGDFGSVGATEWLEGY 350 (640)
T ss_dssp EEEESSGGGTSHHHHHHHHHT
T ss_pred EEEECCcccCchhHHHHHHhh
Confidence 99999999 779999998865
No 56
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=97.93 E-value=1.8e-05 Score=83.29 Aligned_cols=78 Identities=23% Similarity=0.239 Sum_probs=63.3
Q ss_pred CceEEEEECCC--CCcEEEEEEecccccCcccCCCccccCCCCeeecCcchHHHHHHHHHHHHHHc---ccccCCceEEE
Q 013442 93 VTGVVGYIGTG--QPPFVALRADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQV---FRHEIKGTIVL 167 (443)
Q Consensus 93 ~~~via~~~~~--~~~~I~~~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~kg~~a~~l~a~~~l~~---~~~~l~~~i~~ 167 (443)
-.||+|++++. +.+.|++.+|+|+++.|. -.-.+|++++|++++.|++ .+++++++|+|
T Consensus 312 ~~NVi~~i~G~~~~~~~vllgaH~Ds~~~Ga----------------~D~~sG~a~lLe~ar~l~~~~~~g~~p~r~I~f 375 (707)
T 3fed_A 312 IYNVVGTIRGSVEPDRYVILGGHRDSWVFGA----------------IDPTSGVAVLQEIARSFGKLMSKGWRPRRTIIF 375 (707)
T ss_dssp EEEEEEEECCSSEEEEEEEEEEECCCSSSCT----------------TTTHHHHHHHHHHHHHHHHHHHTTCCCSEEEEE
T ss_pred EEEEEEEEeCCCCCCceEEEeccccCCCCCC----------------ccCcHHHHHHHHHHHHHHhhhhccCCCCCCEEE
Confidence 35899999876 357899999999986321 1114799999999999976 46789999999
Q ss_pred EEeccCC-ccchHHHHHHcC
Q 013442 168 VFQPAEE-GGGGAKKMLDAG 186 (443)
Q Consensus 168 i~~~dEE-g~~G~~~~~~~g 186 (443)
++..+|| |..|+.+++++.
T Consensus 376 ~~~~~EE~Gl~GS~~~~~~~ 395 (707)
T 3fed_A 376 ASWDAEEFGLLGSTEWAEEN 395 (707)
T ss_dssp EEESCGGGTSHHHHHHHHHH
T ss_pred EEeCCccccchhHHHHHHhc
Confidence 9999999 779999998753
No 57
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=93.30 E-value=0.14 Score=51.36 Aligned_cols=80 Identities=14% Similarity=-0.050 Sum_probs=61.5
Q ss_pred CCHHHHHHHHHHHHHhcCCcccccCC---CCCCCchHHHHH-hh-cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHH
Q 013442 338 NNKNLHEHFQKVAADMLGVQNIKENR---PLMGTEDFSFFA-EA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPY 412 (443)
Q Consensus 338 ~d~~~~~~~~~~~~~~~g~~~~~~~~---~~~g~tDa~~~~-~~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~ 412 (443)
.|+.+...+++++++. |.+...... ..+|+|++.... +. +|++.++++... .|+|.|-+..+++..
T Consensus 404 t~~~~~~~l~~ia~~~-~Ip~Q~~v~r~D~~gGgTig~i~~s~~Gi~tvdIGiP~ry--------MHS~~E~~~~~D~~~ 474 (496)
T 3vat_A 404 SNAVSEALIREVASSV-GVPLQDLMVRNDSPCGTTIGPILASRLGLRVLDLGSPQLA--------MHSIRETACTTGVLQ 474 (496)
T ss_dssp CCHHHHHHHHHHHHHH-TCCCEEECCCTTSCCCCCHHHHHHHHHTCEEEEEECEEES--------TTSSSEEEESHHHHH
T ss_pred cCHHHHHHHHHHHHHc-CCCEEEEEecCCCCCcchHHHHHhcccCCcEEEecHhhhc--------cccHHHHhhHHHHHH
Confidence 4778889999999887 876543211 135777776554 33 999888877664 999999999999999
Q ss_pred HHHHHHHHHHHHHh
Q 013442 413 GAALHASLATRYLL 426 (443)
Q Consensus 413 ~~~~~a~~~~~l~~ 426 (443)
+++++..++..+-.
T Consensus 475 ~v~Ll~af~~~~~~ 488 (496)
T 3vat_A 475 TITLFKGFFELFPS 488 (496)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHH
Confidence 99999999987643
No 58
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=92.63 E-value=0.065 Score=53.00 Aligned_cols=76 Identities=11% Similarity=-0.053 Sum_probs=58.3
Q ss_pred CCHHHHHHHHHHHHHhcCCcccccCCC--CCCCchHHHHHh--h-cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHH
Q 013442 338 NNKNLHEHFQKVAADMLGVQNIKENRP--LMGTEDFSFFAE--A-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPY 412 (443)
Q Consensus 338 ~d~~~~~~~~~~~~~~~g~~~~~~~~~--~~g~tDa~~~~~--~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~ 412 (443)
.|+.+...+++++++. |.+....... .+|+||++.+.. . +|++.++++... .|++.|.+..+++..
T Consensus 343 ~~~~~~~~l~~~a~~~-~Ip~Q~~~~~~d~~gGsd~g~i~~~~~Gi~tvdiGip~~~--------mHS~~E~~~~~D~~~ 413 (428)
T 2ijz_A 343 TNSETAGFFRHLCQDS-EVPVQSFVTRSDMGCGSTIGPITASQVGVRTVDIGLPTFA--------MHSIRELAGSHDLAH 413 (428)
T ss_dssp CCHHHHTTTTHHHHHT-CCCCCBCCCCSSCCCCCCCSTTTGGGGSCCEEEECCCCCS--------CSSSSCCCCSSHHHH
T ss_pred CCHHHHHHHHHHHHHc-CCCeEEEEEeCCCCccchHHHHHHhCCCCCEEEEchhhcc--------cchHHHHhhHHHHHH
Confidence 6788888999999887 8765432111 567788887743 3 998877666543 999999999999999
Q ss_pred HHHHHHHHHH
Q 013442 413 GAALHASLAT 422 (443)
Q Consensus 413 ~~~~~a~~~~ 422 (443)
+++++..++.
T Consensus 414 ~~~ll~af~~ 423 (428)
T 2ijz_A 414 LVKVLGAFYA 423 (428)
T ss_dssp HHTTHHHHTT
T ss_pred HHHHHHHHHh
Confidence 9999988764
No 59
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=92.06 E-value=0.22 Score=49.45 Aligned_cols=77 Identities=16% Similarity=0.024 Sum_probs=58.5
Q ss_pred CCHHHHHHHHHHHHHhcCCcccccCC---CCCCCchHHHHHhh--cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHH
Q 013442 338 NNKNLHEHFQKVAADMLGVQNIKENR---PLMGTEDFSFFAEA--IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPY 412 (443)
Q Consensus 338 ~d~~~~~~~~~~~~~~~g~~~~~~~~---~~~g~tDa~~~~~~--ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~ 412 (443)
.|+.+...+++++++. |.+...... ..+|++|++.+... +|++-++++... .|+|.|-+..+|+..
T Consensus 368 ~~~~~~~~~~~ia~~~-~Ip~Q~~~~gr~d~~gGstig~i~a~~Gi~tvdiGiP~l~--------MHS~~E~~~~~D~~~ 438 (450)
T 2glf_A 368 AHAEFVARVRKVLNEQ-GVIWQVATLGKVDQGGGGTIAKFFAERGSDVIDMGPALLG--------MHSPFEISSKADLFE 438 (450)
T ss_dssp CCHHHHHHHHHHHHHT-TCCEEECCSSSTTSCCCCCTHHHHHTTTSCEEEEECEEBS--------TTSSSEEEEHHHHHH
T ss_pred CCHHHHHHHHHHHHHc-CCCEEEEEeccCCCCCCCcHHHHHhCCCCcEEEechhhcc--------cchHHHHhhHHHHHH
Confidence 4678888999999887 876543212 14456666665433 999887777654 999999999999999
Q ss_pred HHHHHHHHHHH
Q 013442 413 GAALHASLATR 423 (443)
Q Consensus 413 ~~~~~a~~~~~ 423 (443)
+++++..++.+
T Consensus 439 ~~~l~~af~~~ 449 (450)
T 2glf_A 439 TYVAYRSLMEK 449 (450)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999998764
No 60
>2hc9_A Leucine aminopeptidase 1; carbonate, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics; 1.85A {Caenorhabditis elegans} PDB: 2hb6_A
Probab=91.30 E-value=2.6 Score=41.89 Aligned_cols=111 Identities=13% Similarity=-0.072 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeecc-------cC-------------c-eEEEEECCC-CCcE
Q 013442 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPV-------AV-------------T-GVVGYIGTG-QPPF 107 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~~-------~~-------------~-~via~~~~~-~~~~ 107 (443)
-+-+.+.|+|++-|.--......+++..+.+++.|+++++.+ +. | -+.-+|.+. +.++
T Consensus 167 a~~~~~aR~L~n~P~n~~tP~~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~~~~~~~~ 246 (491)
T 2hc9_A 167 SESVRETARLIDTPANILTTDALVDEAVKVGNATGSKITVIRGEELLKAGFGGIYHVGKAGPTPPAFVVLSHEVPGSTEH 246 (491)
T ss_dssp HHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHTTCEEEEEETHHHHHHTCHHHHHHHTTSSSCCEEEEEEECCTTCSCE
T ss_pred HHHHHHHHHHhcCCchhCCHHHHHHHHHHHHhhcCcEEEEEeHHHHHhCCCCcEEEecccCCCCCEEEEEEeCCCCCCCc
Confidence 567889999999998666667889999999999999988721 11 1 133333322 1244
Q ss_pred EEEEEecccccCcccCCCcccc----CC-CCeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC
Q 013442 108 VALRADMDALAMEESVEWEHKS----KV-PGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (443)
Q Consensus 108 I~~~~H~DtVp~~~~~~w~~~~----~~-~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE 174 (443)
|+|.|- +.+|++ .+ .+-| .++ ++|.|+.+++++++.+. .++.+|..++...|=
T Consensus 247 i~LVGK----------GiTFDsGG~slKp~~~M--~~Mk~DM~GAAaVlg~~~a~a~l--~l~vnv~~~l~~~EN 307 (491)
T 2hc9_A 247 IALVGK----------GVVYDTGGLQIKTKTGM--PNMKRDMGGAAGMLEAYSALVKH--GFSQTLHACLCIVEN 307 (491)
T ss_dssp EEEEEE----------EEEEECCTTSCCCTTTS--TTGGGGGHHHHHHHHHHHHHHTT--TCCSEEEEEEEEEEE
T ss_pred EEEEcC----------ceEecCCCccCCCCcCh--hhccccccHHHHHHHHHHHHHHc--CCCceEEEEEEeeec
Confidence 444442 333441 11 1112 223 48999999999999886 478889988887765
No 61
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=91.05 E-value=0.089 Score=52.46 Aligned_cols=76 Identities=12% Similarity=-0.074 Sum_probs=55.4
Q ss_pred cCCHHHHHHHHHHHHHhcCCcccccCCC----CCCCchHHHHHhh-cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchH
Q 013442 337 VNNKNLHEHFQKVAADMLGVQNIKENRP----LMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALP 411 (443)
Q Consensus 337 ~~d~~~~~~~~~~~~~~~g~~~~~~~~~----~~g~tDa~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~ 411 (443)
..|..+...+++++++. |.+....... .+|+|++..+++. +|++.++++... .|++.|.+..+++.
T Consensus 376 ~~~~~~~~~l~~~a~~~-~Ip~Q~~~~~r~d~~~GgT~~~~~a~~Gi~tvdiGiP~~~--------mHS~~E~~~~~Di~ 446 (458)
T 1y7e_A 376 DADAELVSYIRQLLNKN-NIAWQVATLGKVEEGGGGTVAKFLAGYGIRTIDMGPAVIS--------MHSPMEITSKFDLY 446 (458)
T ss_dssp --CHHHHHHHHHHHHHH-TCCEEEEEECC-----CHHHHHHHHHHTCEEEEECCEEBS--------TTSSSEEEEHHHHH
T ss_pred cCCHHHHHHHHHHHHHc-CCCeEEEEeeccCCCCcCcHHHHHhCCCCCEEEEchhhcc--------cchHHHHhhHHHHH
Confidence 35788899999999988 8865432111 4566766666655 998877766543 99999999999999
Q ss_pred HHHHHHHHHH
Q 013442 412 YGAALHASLA 421 (443)
Q Consensus 412 ~~~~~~a~~~ 421 (443)
.+++++..++
T Consensus 447 ~~~~ll~af~ 456 (458)
T 1y7e_A 447 NAYLAYKAFY 456 (458)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHHH
Confidence 9999988764
No 62
>4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7}
Probab=89.72 E-value=0.49 Score=48.01 Aligned_cols=81 Identities=11% Similarity=-0.091 Sum_probs=59.1
Q ss_pred CCHHHHHHHHHHHHHhc-----CCcccccCC---CCCCCchHHHHH-hh-cCcEEEEecCCCCCCCCCCCCCCCCCCCCC
Q 013442 338 NNKNLHEHFQKVAADML-----GVQNIKENR---PLMGTEDFSFFA-EA-IPGYFYYLGMNDETKGKFETGHSPYFRVNE 407 (443)
Q Consensus 338 ~d~~~~~~~~~~~~~~~-----g~~~~~~~~---~~~g~tDa~~~~-~~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i 407 (443)
.|+.+...+++++++.. |++...... ..+|+|++.... +. +|++.++++... +|+|.|-+..
T Consensus 472 tn~~~~~~l~~iA~~~~~~~~~gIP~Q~~v~rnD~~gGgTig~i~~s~~GIpTvdIGiP~ry--------MHS~~E~~~~ 543 (571)
T 4eme_A 472 TSPLHASLIKRTFELYYNKYKQQIKYQNFMVKNDTPCGSTVGSMVAANLSMPGIDIGIPQLA--------MHSIREIAAV 543 (571)
T ss_dssp CCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCSSSCCCCCSHHHHHHHHTCCEEEEECEEES--------TTSSSEEEEH
T ss_pred cCHHHHHHHHHHHHhcccccCCCCCEEEEEEcCCCCCcchHHHHHHhCCCCcEEEechhhhc--------cchHHHHhhH
Confidence 36778888888877651 554322111 135777766554 34 999988877664 9999999999
Q ss_pred CchHHHHHHHHHHHHHHHh
Q 013442 408 DALPYGAALHASLATRYLL 426 (443)
Q Consensus 408 ~~l~~~~~~~a~~~~~l~~ 426 (443)
+++..+++++..++..+-.
T Consensus 544 ~Dv~~~vkLl~aFl~~~~~ 562 (571)
T 4eme_A 544 HDVFFLIKGVFAFYTYYNQ 562 (571)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHH
Confidence 9999999999999987753
No 63
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum}
Probab=88.52 E-value=3.2 Score=40.35 Aligned_cols=72 Identities=17% Similarity=0.056 Sum_probs=51.0
Q ss_pred CceEEEEE--CCCCCcEEEEEEecccccCcccCCCccccCCCCeeecCcchHHHHHHHHHHHHHHcccccCCceEEEEEe
Q 013442 93 VTGVVGYI--GTGQPPFVALRADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQ 170 (443)
Q Consensus 93 ~~~via~~--~~~~~~~I~~~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~ 170 (443)
+..-++++ +|...+.|+|.+|+|+ |.. +-.--+|++++++.+++|++. .++.++.|+|.
T Consensus 165 G~l~y~e~~ipG~t~~~IllsaH~cH-P~~----------------ANDNaSG~a~lleLar~l~~~--~~~~t~rFvf~ 225 (435)
T 3k9t_A 165 GSLTYGEYYIRGELEEEILLTTYTCH-PSM----------------CNDNLSGVALITFIAKALSKL--KTKYSYRFLFA 225 (435)
T ss_dssp CEEEEEEEEECCSSSCEEEEEEECCC-CSC----------------TTTTHHHHHHHHHHHHHHTTS--CCSSEEEEEEE
T ss_pred CceEEEEEEecCCCCCEEEEEEEcCC-CCC----------------CCccchHHHHHHHHHHHHhcC--CCCceEEEEEc
Confidence 33445555 6655599999999996 310 000026899999999999864 58899999999
Q ss_pred ccCCccchHHHHHHcC
Q 013442 171 PAEEGGGGAKKMLDAG 186 (443)
Q Consensus 171 ~dEEg~~G~~~~~~~g 186 (443)
++ ..|+..++.+.
T Consensus 226 pg---~iGS~~yl~~~ 238 (435)
T 3k9t_A 226 PE---TIGSITWLSRN 238 (435)
T ss_dssp CT---THHHHHHHHHC
T ss_pred Cc---cHHHHHHHHhC
Confidence 83 35888777654
No 64
>3h8g_F Cytosol aminopeptidase; hydrolase, manganese, metal-binding, proteas; HET: BES; 1.50A {Pseudomonas putida} PDB: 3h8e_A 3h8f_A*
Probab=88.44 E-value=3.8 Score=40.78 Aligned_cols=112 Identities=10% Similarity=-0.001 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhC-CCCeeecc-------c-------------Cc-eEEEEECC-C-C
Q 013442 49 FYWMVNIRRKIHENPELGFQEFETSKLIRAELDQM-GIPYKFPV-------A-------------VT-GVVGYIGT-G-Q 104 (443)
Q Consensus 49 ~~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~-G~~~~~~~-------~-------------~~-~via~~~~-~-~ 104 (443)
..+-+.+.|+|++.|.--......+++..+.++++ |+++++.+ + .| -++-+|.+ . .
T Consensus 179 ~a~~~~~aRdL~n~P~n~~~P~~~a~~a~~l~~~~~g~~v~v~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~~ 258 (497)
T 3h8g_F 179 IATGMAFTRDLGNLPPNLCHPSFLAEQAKELGKAHKALKVEVLDEKKIKDLGMGAFYAVGQGSDQPPRLIVLNYQGGKKA 258 (497)
T ss_dssp HHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHCTTEEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEECSCTT
T ss_pred HHHHHHHHHHhhcCCccccCHHHHHHHHHHHHhhcCCceEEEEeHHHHHhCCCCcEEEEccCCCCCCEEEEEEECCCCCC
Confidence 35678899999999987667778899999999999 99988721 1 11 23444432 1 1
Q ss_pred CcEEEEEEecccccCcccCCCcccc----CCC-CeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC
Q 013442 105 PPFVALRADMDALAMEESVEWEHKS----KVP-GKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (443)
Q Consensus 105 ~~~I~~~~H~DtVp~~~~~~w~~~~----~~~-g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE 174 (443)
.++|+|.|- +.+|++ .+. +-|. ++ .+|.|+.+++++++.+. +++.+|..++...|=
T Consensus 259 ~~~i~LVGK----------GiTFDsGG~slKp~~~M~--~Mk~DM~GAAaV~g~~~a~a~l--~l~vnv~~~i~~~EN 322 (497)
T 3h8g_F 259 DKPFVLVGK----------GITFDTGGISLKPGAGMD--EMKYDMCGAASVFGTLRAVLEL--QLPVNLVCLLACAEN 322 (497)
T ss_dssp SCCEEEEEE----------EEEEECCTTSCCCSTTGG--GGGGTTHHHHHHHHHHHHHHHH--TCSSEEEEEEEEEEE
T ss_pred CCcEEEEcC----------ceEeccCCccCCCccchh--hccccchHHHHHHHHHHHHHHc--CCCeEEEEEEEeecc
Confidence 245555443 334441 111 1121 22 48999999999999886 477889988887765
No 65
>1gyt_A Cytosol aminopeptidase; hydrolase, DNA recombination; 2.5A {Escherichia coli} SCOP: c.56.5.3 c.50.1.1
Probab=87.83 E-value=4.5 Score=40.47 Aligned_cols=112 Identities=12% Similarity=0.030 Sum_probs=74.1
Q ss_pred HHHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCC--CCeeecc-------c-------------Cc-eEEEEECCC--
Q 013442 49 FYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMG--IPYKFPV-------A-------------VT-GVVGYIGTG-- 103 (443)
Q Consensus 49 ~~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G--~~~~~~~-------~-------------~~-~via~~~~~-- 103 (443)
..+-+.+.|+|++-|.--......+++..+.++++| +++++.+ + .| -++-+|.+.
T Consensus 180 ~a~~~~laRdL~n~P~N~~tP~~lA~~a~~la~~~g~~~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~Y~g~~~ 259 (503)
T 1gyt_A 180 IAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNAS 259 (503)
T ss_dssp HHHHHHHHHHHHHSCTTTCSHHHHHHHHHHHHHHTTTTEEEEEECHHHHHHTTCHHHHHHHHTSSSCCEEEEEEEECCCC
T ss_pred HHHHHHHHHHHhcCChhhcCHHHHHHHHHHHHHhcCCceEEEEEcHHHHHHCCCCceeeecccCCCCCeEEEEEECCCCC
Confidence 366788999999999866666788999999999999 8887721 1 11 233444221
Q ss_pred -CCcEEEEEEecccccCcccCCCcccc----CCC-CeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC
Q 013442 104 -QPPFVALRADMDALAMEESVEWEHKS----KVP-GKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (443)
Q Consensus 104 -~~~~I~~~~H~DtVp~~~~~~w~~~~----~~~-g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE 174 (443)
..++|+|.|- +.+|++ .+. +-| .++ .+|.|+.+++++++.+. +++.+|+.++...|=
T Consensus 260 ~~~~~i~LVGK----------GITFDsGGislKp~~~M--~~MK~DM~GAAaVlg~~~aia~l--~l~vnV~~~i~~~EN 325 (503)
T 1gyt_A 260 EDARPIVLVGK----------GLTFDSGGISIKPSEGM--DEMKYDMCGAAAVYGVMRMVAEL--QLPINVIGVLAGCEN 325 (503)
T ss_dssp TTCCCEEEEEE----------EEEEECCTTSCCCSTTG--GGGGGGGHHHHHHHHHHHHHHHH--TCSSEEEEEEEEEEE
T ss_pred CCCCcEEEEcC----------ceEecCCCccccCCcCh--hhcccccchHHHHHHHHHHHHHc--CCCeeEEEEEEeecc
Confidence 1244555443 344442 111 112 122 48999999999999886 477899988887765
No 66
>3ij3_A Cytosol aminopeptidase; PEPB, peptidase M17 family, IDP01962 aminopeptidase, hydrolase, manganese, metal-binding, protea structural genomics; HET: PGE PG4; 1.80A {Coxiella burnetii}
Probab=87.49 E-value=2.9 Score=41.21 Aligned_cols=111 Identities=15% Similarity=0.097 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeecc------cCc--------------eEEEEECCCCCcEEE
Q 013442 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPV------AVT--------------GVVGYIGTGQPPFVA 109 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~~------~~~--------------~via~~~~~~~~~I~ 109 (443)
-+-+.+.|+|++.|.--......+++..+.+++.|+++++.+ +.+ -+.-+|++...|+|+
T Consensus 167 a~~~~laRdLvn~P~N~~tP~~~A~~a~~la~~~g~~v~V~~~~~~~~gmg~~laVg~GS~~pPrli~l~y~~~~~~~i~ 246 (482)
T 3ij3_A 167 LTTIYLIRDLINTPAEDMGPSELAQAVKHVAKEFEAKVKIIESKDLETEFPAIYAVGRAGSRPPLLIDLKWGDIKAPKVT 246 (482)
T ss_dssp HHHHHHHHHHHHSCGGGSSHHHHHHHHHHHHHHHTCEEEEEEHHHHHHHCHHHHHHHTTSSSCCEEEEEEESCTTSCEEE
T ss_pred HHHHHHHHHHhcCCccccCHHHHHHHHHHHHHHcCCeEEEEchHHHHcCCCcEEEEccCCCCCCEEEEEEeCCCCCCeEE
Confidence 557889999999998655667888999999999999987621 011 122233221123333
Q ss_pred EEEecccccCcccCCCcccc----CCCC-eeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC
Q 013442 110 LRADMDALAMEESVEWEHKS----KVPG-KMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (443)
Q Consensus 110 ~~~H~DtVp~~~~~~w~~~~----~~~g-~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE 174 (443)
|.|- +.+|++ .+.+ -| .++ .+|.|+.+++++++.+. +++.+|..++...|=
T Consensus 247 LVGK----------GITFDsGGlslKp~~~M--~~MK~DMgGAAaVlg~~~aia~l--~lpvnv~~ii~~~EN 305 (482)
T 3ij3_A 247 LVGK----------GVCFDSGGLDIKTPGGM--LLMKKDMGGAAHALGLARMIMLQ--QLPVRLRLLIPAVEN 305 (482)
T ss_dssp EEEC----------EEEEECCTTSCCCHHHH--TTGGGGGHHHHHHHHHHHHHHHT--TCSSEEEEEEEEEEE
T ss_pred EEcc----------ceEeecCCccCcCccch--hhccccchHHHHHHHHHHHHHHc--CCCceEEEEEEeecc
Confidence 3332 233431 1110 01 122 38999999999999886 478899998887765
No 67
>3jru_B Probable cytosol aminopeptidase; bacterial blight, XOO0834, PEPA, xanthomonas oryzae PV. ORYZ KACC10331, hydrolase, manganese; 2.60A {Xanthomonas oryzae PV}
Probab=86.37 E-value=6.2 Score=39.19 Aligned_cols=113 Identities=13% Similarity=-0.000 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhC-CCCeeecc-------c-------------Cc-eEEEEECCC-CCc
Q 013442 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQM-GIPYKFPV-------A-------------VT-GVVGYIGTG-QPP 106 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~-G~~~~~~~-------~-------------~~-~via~~~~~-~~~ 106 (443)
.+-+.+.|+|++.|.--......+++..+.+++. |+++++.+ + .| -+.-+|.+. ..+
T Consensus 176 a~~~~~aRdL~n~P~n~~~P~~~a~~a~~~~~~~~g~~v~v~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~~~ 255 (490)
T 3jru_B 176 AEGVEFARELGNLPPNYCTPAYLADTAAAFAGKFPGAEAEILDEAQMEALGMGSLLSVARGSANRPRLIVLKWNGGGDAR 255 (490)
T ss_dssp HHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHTTSTTEEEEEECHHHHHHTTCHHHHHHHHTCSSCCEEEEEEEETTTTSC
T ss_pred HHHHHHHHHhhcCCccccCHHHHHHHHHHHHhhcCCCeEEEEcHHHHHhCCCCcEEEEccCCCCCCEEEEEEEcCCCCCC
Confidence 6678999999999987666778899999999887 99987721 1 11 133334222 224
Q ss_pred EEEEEEecccccCcccCCCcccc----CCC-Ceeec-CcchHHHHHHHHHHHHHHcccccCCceEEEEEeccCC
Q 013442 107 FVALRADMDALAMEESVEWEHKS----KVP-GKMHA-CGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (443)
Q Consensus 107 ~I~~~~H~DtVp~~~~~~w~~~~----~~~-g~l~G-rG~kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE 174 (443)
+|+|.|- +.+|++ .+. +-|.+ +...+|.|+.+++++++.+. +++.+|+.++...|=
T Consensus 256 ~i~LVGK----------GiTFDsGG~slKp~~~M~~Mk~DM~GAAaV~g~~~a~a~l--~l~vnv~~~i~~~EN 317 (490)
T 3jru_B 256 PYVLVGK----------GITFDTGGVNLKTQGGIEEMKYDMCGGATVIGTFVATVKA--ELPINLVVVVPAVEN 317 (490)
T ss_dssp CEEEEEC----------EEEEECCTTSCCCSSCGGGGGGGGHHHHHHHHHHHHHHHT--TCSSEEEEEEEEEEE
T ss_pred cEEEEcC----------eeEecCCCccCCCcccHhhCcccchHHHHHHHHHHHHHHc--CCCcEEEEEEEeecc
Confidence 4554442 334441 111 11111 11148999999999999986 477889888887765
No 68
>3pei_A Cytosol aminopeptidase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich; HET: MSE; 2.70A {Francisella tularensis subsp}
Probab=86.21 E-value=5.2 Score=39.67 Aligned_cols=111 Identities=14% Similarity=0.048 Sum_probs=71.9
Q ss_pred HHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhC-CCCeeecc-------c-------------Cc-eEEEEECCC--CC
Q 013442 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQM-GIPYKFPV-------A-------------VT-GVVGYIGTG--QP 105 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~-G~~~~~~~-------~-------------~~-~via~~~~~--~~ 105 (443)
.+-+.+.|+|++.|.--......+++..+.+++. |+++++.+ + .| -++-+|.+. ..
T Consensus 164 a~~~~~aRdL~n~P~n~~~P~~~a~~a~~l~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~~~ 243 (486)
T 3pei_A 164 ACGQNYAKDLQNLPANICTTDYMLNEARELTSKYATFSLDYLDQDAMAELGMGCALAVGRGSYMSNYTVCMEYKGGNEGD 243 (486)
T ss_dssp HHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHTCTTEEEEEECHHHHHHTTCHHHHHHHTTCSSCCEEEEEEEECSCTTS
T ss_pred HHHHHHHHHHhcCChhhcCHHHHHHHHHHHHhhcCCceEEEEeHHHHHhCCCCcEEEeccCCCCCCEEEEEEECCCCCCC
Confidence 5678899999999986666778899999999998 89987721 1 11 133344221 12
Q ss_pred cEEEEEEecccccCcccCCCcccc----CCC-CeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC
Q 013442 106 PFVALRADMDALAMEESVEWEHKS----KVP-GKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (443)
Q Consensus 106 ~~I~~~~H~DtVp~~~~~~w~~~~----~~~-g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE 174 (443)
++|+|.|- +.+|++ .+. +-| .++ .+|.|+.+++++++.+. +++.+|..++...|=
T Consensus 244 ~~i~LVGK----------GiTFDsGG~slKp~~~M--~~Mk~DM~GAAaVlg~~~a~a~l--~l~vnv~~~i~~~EN 306 (486)
T 3pei_A 244 APIVLVGK----------GLVFDNGGICIKQAAGM--DSMKMDMGGVAAVMGTMKAIAML--NLPVNVVGVMGLAEN 306 (486)
T ss_dssp CCEEEEEE----------EEETEECC--------------EECSHHHHHHHHHHHHHHHH--TCSSEEEEEEEEEEC
T ss_pred CcEEEEcc----------ceEEecCCcccCCccch--hhhhccchHHHHHHHHHHHHHHc--CCCcEEEEEEEeecc
Confidence 45555443 334441 111 111 122 48999999999999886 477889888887765
No 69
>1lam_A Leucine aminopeptidase; exopeptidase, metallopeptidase, hydrolase (A aminoacylpeptide); 1.60A {Bos taurus} SCOP: c.56.5.3 c.50.1.1 PDB: 1lan_A 1lcp_A* 1lap_A 1bpn_A 1bpm_A 1bll_E* 2j9a_A* 2ewb_A*
Probab=86.07 E-value=5.4 Score=39.63 Aligned_cols=111 Identities=12% Similarity=0.035 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCC--CCeeecc-------cCce--------------EEEEECCC---
Q 013442 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMG--IPYKFPV-------AVTG--------------VVGYIGTG--- 103 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G--~~~~~~~-------~~~~--------------via~~~~~--- 103 (443)
.+-+.+.|+|++-|.--......+++..+.+++.| +++++.+ +.+. ++-+|.+.
T Consensus 161 a~~~~laRdLvn~P~N~~tP~~lA~~a~~l~~~~g~~~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~y~g~~~~ 240 (484)
T 1lam_A 161 ASGQNLARRLMETPANEMTPTKFAEIVEENLKSASIKTDVFIRPKSWIEEQEMGSFLSVAKGSEEPPVFLEIHYKGSPNA 240 (484)
T ss_dssp HHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHHCSSEEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEECSSST
T ss_pred HHHHHHHHHhhCCChhhcCHHHHHHHHHHHHHHcCCceEEEEEeHHHHHHCCCCceeeeccCCCCCCeEEEEEECCCCCC
Confidence 56788999999999966666788999999999999 8887721 1111 22333211
Q ss_pred CCcEEEEEEecccccCcccCCCcccc----CCC-CeeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC
Q 013442 104 QPPFVALRADMDALAMEESVEWEHKS----KVP-GKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (443)
Q Consensus 104 ~~~~I~~~~H~DtVp~~~~~~w~~~~----~~~-g~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE 174 (443)
..++|+|.|- +.+|++ .+. +-| .++ .+|.|+.+++++++.+. +++.+|..++...|=
T Consensus 241 ~~~~i~LVGK----------GITFDsGG~slKp~~~M--~~MK~DMgGAAaVlg~~~aia~l--~l~vnv~~~i~~~EN 305 (484)
T 1lam_A 241 SEPPLVFVGK----------GITFDSGGISIKAAANM--DLMRADMGGAATICSAIVSAAKL--DLPINIVGLAPLCEN 305 (484)
T ss_dssp TSCCEEEEEC----------EEEEECCTTSCCCSTTG--GGGGGTTHHHHHHHHHHHHHHHT--TCSSEEEEEEEEEEE
T ss_pred CCCcEEEEec----------ceEEcCCCcCCcCccch--hhhhccchHHHHHHHHHHHHHHc--CCCeeEEEEEEeecc
Confidence 1123443332 334441 111 112 122 48999999999999886 477889888887765
No 70
>4efd_A Aminopeptidase; structural genomics, structural genomics consortium, SGC, hydrolase; 2.45A {Trypanosoma brucei brucei}
Probab=85.07 E-value=6.6 Score=39.03 Aligned_cols=111 Identities=9% Similarity=-0.029 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeecc-------c-------------Cc-eEEEEECCC--CCc
Q 013442 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPV-------A-------------VT-GVVGYIGTG--QPP 106 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~~-------~-------------~~-~via~~~~~--~~~ 106 (443)
-+-+.+.|+|++.|.--......+++..+.++++|+++++.+ + .| -+.-+|.+. ..+
T Consensus 204 a~~~~laRdLvn~P~N~~tP~~lA~~a~~l~~~~gv~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~L~Y~g~~~~~~ 283 (522)
T 4efd_A 204 ATSTQLCQRLVDAPPNLLTTATFTEIAQGYAKALGFDVDVICGDDLCERGYGGIYSVGKAAFEAPRLVTLLYTPKGTPVK 283 (522)
T ss_dssp HHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHHTCEEEEEETHHHHHHTCHHHHHHHTTSSSCCEEEEEEECCSSCCSE
T ss_pred HHHHHHHHHHhcCCchhCCHHHHHHHHHHHHHHcCCEEEEEeHHHHHHcCCCcEEeeccCCCCCCEEEEEEECCCCCCCC
Confidence 457889999999999766677889999999999999987721 1 11 233444332 124
Q ss_pred EEEEEEecccccCcccCCCccccCCCCe-ee-cCc---c---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC
Q 013442 107 FVALRADMDALAMEESVEWEHKSKVPGK-MH-ACG---H---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (443)
Q Consensus 107 ~I~~~~H~DtVp~~~~~~w~~~~~~~g~-l~-GrG---~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE 174 (443)
+|+|.|- +.+|++ +|. |- +.| + .+|.|+.+++++++.+. +++.+|..++...|=
T Consensus 284 ~iaLVGK----------GITFDS--GGlsLKp~~~M~~MK~DMgGAAaVlga~~a~a~l--~lpvnV~~vl~~~EN 345 (522)
T 4efd_A 284 KVSLVGK----------GIVYDC--GGLALKPADYMKLMKHDMGGAAAVFCGFLTAVRL--QQPVQLSCTLCLAEN 345 (522)
T ss_dssp EEEEEEE----------EEETCC--CCSSSCHHHHHHHGGGTTHHHHHHHHHHHHHHHH--TCSEEEEEEEEEEEC
T ss_pred cEEEecC----------ceEeec--CCccCCCccchhhcccccchHHHHHHHHHHHHHc--CCCceEEEEEEEecc
Confidence 5555543 334441 110 00 112 2 38999999999999886 478889888887765
No 71
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=85.05 E-value=0.39 Score=47.88 Aligned_cols=75 Identities=9% Similarity=-0.005 Sum_probs=55.2
Q ss_pred CCHHHHHHHHHHHHHhcCCcccccCC----CCCCCchHHHHHhh-cCcEEEEecCCCCCCCCCCCCCCCCCCCCCCchHH
Q 013442 338 NNKNLHEHFQKVAADMLGVQNIKENR----PLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPY 412 (443)
Q Consensus 338 ~d~~~~~~~~~~~~~~~g~~~~~~~~----~~~g~tDa~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~p~E~i~i~~l~~ 412 (443)
.|..+...+++++++. |.+...... ..+|+|.+..+++. +|++.++++... .|+|.|.+..+++..
T Consensus 380 ~~~~~~~~l~~ia~~~-~Ip~Q~~~~gr~d~~~GgTig~~~a~~Gi~tvdiGiP~l~--------MHS~~E~~~~~Di~~ 450 (461)
T 2glj_A 380 ANPEYIAELRRILSKE-SVNWQTAELGKVDQGGGGTIAYILAEYGMQVIDCGVALLN--------MHAPWEISSKADIYE 450 (461)
T ss_dssp CCHHHHHHHHHHHHHT-CCCEEECCSSSSSSSCCCCTHHHHHTTTCBCCBBCCEEES--------TTSSSEEEEHHHHHH
T ss_pred CCHHHHHHHHHHHHHc-CCCeEEEeeeccCCCCcccHHHHHhCCCCCEEEEchhhcc--------cchHHHHhhHHHHHH
Confidence 4778889999999887 876543111 13466765556555 898876666543 999999999999999
Q ss_pred HHHHHHHHH
Q 013442 413 GAALHASLA 421 (443)
Q Consensus 413 ~~~~~a~~~ 421 (443)
+++++..++
T Consensus 451 ~~~l~~af~ 459 (461)
T 2glj_A 451 TKNGYSAFL 459 (461)
T ss_dssp HHHHHHTTS
T ss_pred HHHHHHHHH
Confidence 999987654
No 72
>3kzw_A Cytosol aminopeptidase; hydrolase, manganese binding, protease, structural genomics; 2.70A {Staphylococcus aureus subsp}
Probab=82.30 E-value=14 Score=36.79 Aligned_cols=111 Identities=14% Similarity=0.031 Sum_probs=73.0
Q ss_pred HHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeecc-------c-------------Cc-eEEEEECCC--CCc
Q 013442 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPV-------A-------------VT-GVVGYIGTG--QPP 106 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~~-------~-------------~~-~via~~~~~--~~~ 106 (443)
.+-+.+.|+|++.|.--......+++..+.+++.|+++++.+ + .| -++-+|.+. ..+
T Consensus 197 a~~~~~aRdL~n~P~n~ltP~~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~~~~ 276 (515)
T 3kzw_A 197 GQSINLARDFSNMPPNVLTPQTFAEDIVNHFKNTKVKVDVKDYDTLVSEGFGLLQAVGKGSKHKPRLVTITYNGKDKDEA 276 (515)
T ss_dssp HHHHHHHHHHHHSCTTTSCHHHHHHHHHHHSTTSSCEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEESSCSSCC
T ss_pred HHHHHHHHHHhcCCccccCHHHHHHHHHHHHHhcCcEEEEEcHHHHHHcCCCcEEEEccCCCCCCEEEEEEECCCCCCCC
Confidence 567889999999999766777889999999999999987721 1 11 133334221 124
Q ss_pred EEEEEEecccccCcccCCCcccc----CCCC-eeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC
Q 013442 107 FVALRADMDALAMEESVEWEHKS----KVPG-KMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (443)
Q Consensus 107 ~I~~~~H~DtVp~~~~~~w~~~~----~~~g-~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE 174 (443)
+|+|.|- +.+|++ .+.+ -| .++ .+|.|+.+++++++.+.+ ++.+|..++...|=
T Consensus 277 ~i~LVGK----------GiTFDsGG~slKp~~~M--~~MK~DM~GAAaVlg~~~a~a~l~--lpvnv~~~i~~~EN 338 (515)
T 3kzw_A 277 PIALVGK----------GITYDSGGYSIKTKNGM--ATMKFDMCGAANVVGIIEAASRLQ--LPVNIVGVLACAEN 338 (515)
T ss_dssp CEEEEEE----------EEEEECCTTSCCCHHHH--TTGGGGGHHHHHHHHHHHHHHHTT--CSCEEEEEEEEEEE
T ss_pred cEEEecC----------ceEEecCCcCCCCccCh--hhchhchHHHHHHHHHHHHHHHcC--CCceEEEEEEeecc
Confidence 4554443 333431 1100 01 223 489999999999999864 77889888887765
No 73
>3kr4_A M17 leucyl aminopeptidase; protease, hydrolase; HET: BES 1PE; 2.00A {Plasmodium falciparum} PDB: 3kqz_A* 3kqx_A* 3kr5_A* 3t8w_A*
Probab=80.57 E-value=15 Score=36.70 Aligned_cols=114 Identities=13% Similarity=0.067 Sum_probs=73.5
Q ss_pred hHHHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCeeecc--------------------cCc-eEEEEECCC--C
Q 013442 48 IFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPV--------------------AVT-GVVGYIGTG--Q 104 (443)
Q Consensus 48 ~~~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~~~~~--------------------~~~-~via~~~~~--~ 104 (443)
..-+-+.+.|+|++.|.--......++...+.++++|+++++.+ ..| -++-+|.+. .
T Consensus 203 ~~a~~v~laRdLvn~P~N~ltP~~lA~~a~~la~~~g~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~y~g~~~~ 282 (528)
T 3kr4_A 203 VYYFGTYYASQLIAAPSNYCNPVSLSNAAVELAQKLNLEYKILGVKELEELKMGAYLSVGKGSMYPNKFIHLTYKSKGDV 282 (528)
T ss_dssp HHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHHTCEEEEECHHHHHHTTCHHHHHHGGGCSSCCEEEEEEEECSSCC
T ss_pred HHHHHHHHHHHHhhCCccccCHHHHHHHHHHHHHHcCCeEEEeeHHHHHhcCCCeEEeeccCCCCCCEEEEEEEcCCCCC
Confidence 34567889999999998666667788888888889999988720 111 244444332 1
Q ss_pred CcEEEEEEecccccCcccCCCcccc----CCC--C-eeecCcc---hHHHHHHHHHHHHHHcccccCCceEEEEEeccCC
Q 013442 105 PPFVALRADMDALAMEESVEWEHKS----KVP--G-KMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (443)
Q Consensus 105 ~~~I~~~~H~DtVp~~~~~~w~~~~----~~~--g-~l~GrG~---kg~~a~~l~a~~~l~~~~~~l~~~i~~i~~~dEE 174 (443)
.++|+|.|- +.+|++ .+. | .| .++ .+|.|+.+++++++.+.+ ..+.+|..++...|=
T Consensus 283 ~~~iaLVGK----------GITFDsGG~slKp~~g~~M--~~MK~DM~GAAaVlg~~~aia~l~-~~~vnv~~vi~~~EN 349 (528)
T 3kr4_A 283 KKKIALVGK----------GITFDSGGYNLKAAPGSMI--DLMKFDMSGCAAVLGCAYCVGTLK-PENVEIHFLSAVCEN 349 (528)
T ss_dssp CEEEEEEEE----------EEEEECCTTSCSCSTTCCG--GGGGGGGHHHHHHHHHHHHHHHHC-CSSEEEEEEEEEEEE
T ss_pred CCcEEEecC----------ceEeecCCcccCCCCCcCH--HHhhcCcchHHHHHHHHHHHHhcC-CCCceEEEEEEeecc
Confidence 356666553 344441 111 1 11 123 389999999999998764 225788888777755
No 74
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=79.31 E-value=3.4 Score=40.87 Aligned_cols=54 Identities=19% Similarity=0.108 Sum_probs=38.9
Q ss_pred CCCcccHHHHHHHHHHHHhCCCCee--e-----------cccCceEEEEECCCC--CcEEEEEEecccc
Q 013442 64 ELGFQEFETSKLIRAELDQMGIPYK--F-----------PVAVTGVVGYIGTGQ--PPFVALRADMDAL 117 (443)
Q Consensus 64 S~s~~E~~~~~~l~~~l~~~G~~~~--~-----------~~~~~~via~~~~~~--~~~I~~~~H~DtV 117 (443)
+-|+-++.+.++++++|++.||.-- . +..+.+++|...+++ .+.+++.+|+|.+
T Consensus 28 ~~s~t~~h~v~~~~~~l~~~Gf~~l~e~~~l~~g~k~~~~r~~~~lia~~~g~~~~~g~~ii~AH~Dsp 96 (450)
T 2glf_A 28 SKAKTERMTVKEIKRILDESGFVPLEDFAGDPMNMTVYAVNRGKAIAAFRVVDDLKRGLNLVVAHIDSP 96 (450)
T ss_dssp HHCSSHHHHHHHHHHHHHTTTCEETTSCCSCTTSBCEEEESSSSCEEEEEBCSCGGGCCEEEEEECCCC
T ss_pred HcCCCHHHHHHHHHHHHHHCcCEEcccccCCCCCCEEEEEcCCCEEEEEEeCCCCCCCeEEEEEecccC
Confidence 3344578999999999999999531 1 112357888765532 3789999999987
No 75
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=77.76 E-value=1.3 Score=44.02 Aligned_cols=61 Identities=11% Similarity=0.003 Sum_probs=38.2
Q ss_pred HHHHHhCCCCCcccHHHHHHHHHHHHhCCCC-------------eeecccCceEEEEE-CCC---CCcEEEEEEecccc
Q 013442 56 RRKIHENPELGFQEFETSKLIRAELDQMGIP-------------YKFPVAVTGVVGYI-GTG---QPPFVALRADMDAL 117 (443)
Q Consensus 56 l~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~-------------~~~~~~~~~via~~-~~~---~~~~I~~~~H~DtV 117 (443)
.++++.+-+-|+-++.+.+++.++|++.||. +..+..+..+++.. +.. .++. ++.+|+|..
T Consensus 22 ~~~~~~fl~~spT~~hav~~~~~~l~~~Gf~~l~e~~~l~~g~~~~~~r~g~~i~a~~~G~~~~~~g~~-ii~AH~Dsp 99 (458)
T 1y7e_A 22 SESYKKFISKFKTEREVTAYALDKAKKLGFINAEEKKNLMPGDKIFYTCREKSVAFAIIGKNPIEDGMN-FIVSHTDSP 99 (458)
T ss_dssp HHHHHHHHHHCCSHHHHHHHHHHHHHTTTCEESTTCCCCCTTCEEECBCSSSCBCCEECCSSCGGGCCE-ECCCBCCCC
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCeEEEECCCCEEEEEEeCCCCCCCCcE-EEEEccCcC
Confidence 3333333334455689999999999999986 33333333344333 332 2345 999999998
No 76
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=77.72 E-value=0.53 Score=46.41 Aligned_cols=61 Identities=11% Similarity=0.129 Sum_probs=41.8
Q ss_pred HHHHhCCCCCcccHHHHHHHHHHHHhCCC---------------CeeecccCceEEEEECCCC----CcEEEEEEecccc
Q 013442 57 RKIHENPELGFQEFETSKLIRAELDQMGI---------------PYKFPVAVTGVVGYIGTGQ----PPFVALRADMDAL 117 (443)
Q Consensus 57 ~~l~~ipS~s~~E~~~~~~l~~~l~~~G~---------------~~~~~~~~~~via~~~~~~----~~~I~~~~H~DtV 117 (443)
++++.+=.-|+.++.+.++++++|++.|| ++..+..+.+++|...++. .+.+++.+|+|.+
T Consensus 6 ~~~~~fl~~~~t~~h~v~~~~~~l~~~Gf~~l~e~~~w~l~~g~k~~~~~~~g~lia~~~G~~~~~~~~~~ii~AH~Dsp 85 (428)
T 2ijz_A 6 QGLIDFLKASPTPFHATASLARRLEAAGYRRLDERDAWHTETGGRYYVTRNDSSLIAIRLGRRSPLESGFRLVGAHTDSP 85 (428)
T ss_dssp --CCCSSTTTHHHHHHHCCSHHHHHHHHHHHSCC--------CCCCEECTTTTCCEEEECC--CCSTTCCEEEECBCCCS
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHcCCeEcccccccccCCCCEEEEECCCCEEEEEEECCcCCCCCCcEEEEEcCCcC
Confidence 34455555566778888999999998888 2333333368888875432 4789999999998
No 77
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=68.15 E-value=25 Score=24.59 Aligned_cols=64 Identities=20% Similarity=0.347 Sum_probs=42.8
Q ss_pred CcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCcccCC---HHHHHHHHHHHHHhcCCccc
Q 013442 285 DSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNN---KNLHEHFQKVAADMLGVQNI 359 (443)
Q Consensus 285 ~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d---~~~~~~~~~~~~~~~g~~~~ 359 (443)
|.-++.+|+|...+...+....++++.+..+.. . .+.+.. . ..+| .++..++....+++ |...+
T Consensus 15 dgqeieidirvstgkeleralqelekalaraga-r--nvqiti--s-----aendeqakelleliarllqkl-gykdi 81 (96)
T 2jvf_A 15 DGQEIEIDIRVSTGKELERALQELEKALARAGA-R--NVQITI--S-----AENDEQAKELLELIARLLQKL-GYKDI 81 (96)
T ss_dssp TTEEEEEEEECCSSSHHHHHHHHHHHHHHHHTC-S--EEEEEE--E-----CSSHHHHHHHHHHHHHHHHHH-TCSEE
T ss_pred CCeEEEEEEEEcccHHHHHHHHHHHHHHHhccc-c--ceEEEE--E-----ecChHHHHHHHHHHHHHHHHh-CCCce
Confidence 567899999999999888888888888776432 2 334433 1 1233 34666666667777 76553
No 78
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=67.86 E-value=8.4 Score=40.43 Aligned_cols=53 Identities=21% Similarity=0.253 Sum_probs=42.7
Q ss_pred cccchHHHHhhcCchhHHHHHHHHHHHHhCCCCCcc--cHHHHHHHHHHHHhCCCC-eee
Q 013442 33 TQIPVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQ--EFETSKLIRAELDQMGIP-YKF 89 (443)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~i~ll~~l~~ipS~s~~--E~~~~~~l~~~l~~~G~~-~~~ 89 (443)
+++.+.+.+.++. +.+.+.++.|.++|..++. +.++++|+++.|+++|++ ++.
T Consensus 12 ~~l~~~~~~~~~~----~~i~~~l~~lt~~ph~aGt~~~~~~a~yi~~~~~~~Gl~~v~~ 67 (707)
T 3fed_A 12 QSIRWKLVSEMKA----ENIKSFLRSFTKLPHLAGTEQNFLLAKKIQTQWKKFGLDSAKL 67 (707)
T ss_dssp -CHHHHHHHHCCH----HHHHHHHHHHSSSCCCTTSHHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHhCCH----HHHHHHHHHHhcCCCcCCCHhHHHHHHHHHHHHHHcCCCceeE
Confidence 3456677777765 6799999999999988874 578999999999999998 654
No 79
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=65.87 E-value=9.5 Score=35.50 Aligned_cols=60 Identities=12% Similarity=0.136 Sum_probs=44.0
Q ss_pred CCCchHHHHHhh-cCcEEEEecCCCCCCCCCCCCCCCC---CCCCCCchHHHHHHHHHHHHHHHhhcCCC
Q 013442 366 MGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPY---FRVNEDALPYGAALHASLATRYLLENQPK 431 (443)
Q Consensus 366 ~g~tDa~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~p~---E~i~i~~l~~~~~~~a~~~~~l~~~~~~~ 431 (443)
.+.+|-..|.+. +|++.+....- ....|+++ |.++.+.+.+..++++.++++|+......
T Consensus 241 ~~~SDH~pF~~~GIP~l~~~~~~~------~~~yHt~~Dt~d~id~~~l~~~~~i~~~fv~e~l~~~~~P 304 (312)
T 4f9u_A 241 LVDDDHRPFLDENVPVLHLVATPF------PDVWHTPRDNAANLHWPSIRNFNRVFRNFVYQYLKRHTSP 304 (312)
T ss_dssp CCCCTTHHHHTTTCCEEEEECSSC------CTTTTSTTCSGGGCCHHHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred CCCCchHHHHHCCCCEEEEECCCC------CCCCCCCccChhhCCHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 345787777777 99876543321 13478887 56788999999999999999999765443
No 80
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=60.96 E-value=20 Score=34.87 Aligned_cols=72 Identities=14% Similarity=0.096 Sum_probs=49.3
Q ss_pred HHHHHHhcCCcccccCCCCCCCchHHHHHhh-cCcEEEEecCCCCCCCCCCCCCCCCCC---CCCCchHHHHHHHHHHHH
Q 013442 347 QKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFR---VNEDALPYGAALHASLAT 422 (443)
Q Consensus 347 ~~~~~~~~g~~~~~~~~~~~g~tDa~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~p~E~---i~i~~l~~~~~~~a~~~~ 422 (443)
.+..+++ |.+ . .....+++|...|.+. +|++.+. +... ....|++... ++.+.+...+++++.++.
T Consensus 328 ~~~~~~~-~~~-~--~~~~~~~SD~~~F~~~GIP~~~~~-~~~~-----~~~yHt~~Dt~~~i~~~~l~~~~~~~~~~~~ 397 (421)
T 2ek8_A 328 AAASSRL-SGV-L--PYGQEGRSDHESFHALGIPAALFI-HAPV-----EPWYHTPNDTLDKISKEKLDNVADIVGSAVY 397 (421)
T ss_dssp HHHHHHH-TSC-C--CEEECCSSTHHHHHTTTCCEEEEE-EESC-----CTTTTSTTCCGGGBCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhc-CCC-C--CCCCCCCCccHHHHHCCCCEEEEE-CCcC-----CCCCCCcccchhhCCHHHHHHHHHHHHHHHH
Confidence 3444555 664 2 1234567898878777 9987543 2211 1348999887 788999999999999999
Q ss_pred HHHhhc
Q 013442 423 RYLLEN 428 (443)
Q Consensus 423 ~l~~~~ 428 (443)
++.+.+
T Consensus 398 ~la~~~ 403 (421)
T 2ek8_A 398 QAARPG 403 (421)
T ss_dssp HHHSSS
T ss_pred HHhCCC
Confidence 988644
No 81
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=59.73 E-value=2.2 Score=42.38 Aligned_cols=48 Identities=17% Similarity=0.191 Sum_probs=33.5
Q ss_pred cHHHHHHHHHHHHhCCCCeeec------------------ccCceEEEEECCCC---CcEEEEEEecccc
Q 013442 69 EFETSKLIRAELDQMGIPYKFP------------------VAVTGVVGYIGTGQ---PPFVALRADMDAL 117 (443)
Q Consensus 69 E~~~~~~l~~~l~~~G~~~~~~------------------~~~~~via~~~~~~---~~~I~~~~H~DtV 117 (443)
++.+.+++.++|++.||+ +.. ..+..++|...++. .+.+++.+|+|.+
T Consensus 37 ~~hav~~~~~~l~~sGfe-~l~e~~~~~w~l~~g~~~~~~~~g~slia~~~G~~~~~~g~~ii~AH~Dsp 105 (461)
T 2glj_A 37 ERECVTELIKTAEKSGYR-NIEDILAKGETLKEGDKVYANNRGKGLIMFLIGKEPLYTGFKILGAHIDSP 105 (461)
T ss_dssp CSSTHHHHHHHSCCSSCC-CTTCCCSTTTTCCTTCCCEEEETTTEEEECCCCSSCGGGCCEEEEEECCCC
T ss_pred HHHHHHHHHHHHHHcCCh-hHHHHhhHhhccCCCCEEEEEcCCCEEEEEEeCCcCccCCceEEEEecCcC
Confidence 468889999999999998 321 11223777664432 2459999999998
No 82
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=52.16 E-value=20 Score=35.63 Aligned_cols=48 Identities=15% Similarity=0.111 Sum_probs=39.7
Q ss_pred CceEEEEEEEcCCcCccccCcEEEEEEEecCChHHHHHHHHHHHHHHHHHHHhh
Q 013442 266 SQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQ 319 (443)
Q Consensus 266 ~~t~~v~~i~gG~~~n~vP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~ 319 (443)
..|+|++.++ .-++.+++.+++|+++..+.+++.+++++.++......
T Consensus 347 ~~S~n~gv~~------~~~~~~~~~~~~R~~~~~~~~~i~~~l~~~~~~~g~~~ 394 (490)
T 3mru_A 347 ETSLNVGVIT------TEENKVTVLCLIRSLIDSGRSQVEGMLQSVAELAGAQI 394 (490)
T ss_dssp EEEEEEEEEE------EETTEEEEEEEEEESSHHHHHHHHHHHHHHHHHTTCEE
T ss_pred eEEEEEEEEE------EeCCEEEEEEEcCCCCchHHHHHHHHHHHHHHHcCCeE
Confidence 5688888875 33778999999999999999999999999997654433
No 83
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=49.69 E-value=17 Score=34.09 Aligned_cols=57 Identities=18% Similarity=0.119 Sum_probs=39.8
Q ss_pred CCchHHHHHhh-cCcEEEEecCCCCCCCCCCCCCCCC---CCCCCCchHHHHHHHHHHHHHHHhhcC
Q 013442 367 GTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPY---FRVNEDALPYGAALHASLATRYLLENQ 429 (443)
Q Consensus 367 g~tDa~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~p~---E~i~i~~l~~~~~~~a~~~~~l~~~~~ 429 (443)
..+|-..|.+. +|++.+ +.... ....|+++ |.|+.+.+++..+++..++.+|+..+.
T Consensus 267 ~~SDH~pF~~~GIP~l~~-i~~~~-----~~~yHT~~Dt~d~iD~~tl~~~~~ii~~Fv~EyL~~~~ 327 (330)
T 4fai_A 267 IEDDHIPFLRRNVPILHL-IPVPF-----PSVWHTPDDNASVIDYATTDNLALIIRLFALEYLLAGT 327 (330)
T ss_dssp CCSTTHHHHTTTCCEEEE-CCSSC-----CTTTTSTTSSGGGCCHHHHHHHHHHHHHHHHHHHTC--
T ss_pred CCCchHHHHHCCCCEEEE-ECCCC-----CCCCCCCcCChhhCCHHHHHHHHHHHHHHHHHHHhhCC
Confidence 34787777777 997654 33322 23579988 457778889999999999999886443
No 84
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=47.38 E-value=48 Score=30.69 Aligned_cols=80 Identities=14% Similarity=0.090 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHhcCCccc-ccCCCCCCCchHHHHHh-h-cCcEEEEe-cCCCCCCCCCCCCCCCC---CCCCCCchHHHH
Q 013442 342 LHEHFQKVAADMLGVQNI-KENRPLMGTEDFSFFAE-A-IPGYFYYL-GMNDETKGKFETGHSPY---FRVNEDALPYGA 414 (443)
Q Consensus 342 ~~~~~~~~~~~~~g~~~~-~~~~~~~g~tDa~~~~~-~-ip~~~~~~-G~~~~~pG~~~~~H~p~---E~i~i~~l~~~~ 414 (443)
+.+.+.+.++.+ |.... .........+|-..|.+ . +|++.+.. ++... -+.....|+++ |.|+.+.+.+..
T Consensus 222 l~~~~~~~a~~~-g~~~~f~~~~~g~~~sDh~~f~~~~GiP~~~li~~~~~~~-~~~~~~~Ht~~Dt~d~id~~~l~~~~ 299 (309)
T 3tc8_A 222 IVEMVWSAARDL-GYGKYFINAAGGAITDDHQYVISGRNIPSIDIINYDPESK-TGFASYWHTQKDNMENIDRETLKAAG 299 (309)
T ss_dssp HHHHHHHHHHHH-TCTTTEEEEECCCCCCHHHHHHHHHCCCEEEEEBCCTTSS-SSSCTTTTSTTCSGGGBCHHHHHHHH
T ss_pred HHHHHHHHHHHc-CCcceeccCCCCCCCCccHHHHhcCCCCEEEEecccCccc-CCCCCCCCCCcCChhhCCHHHHHHHH
Confidence 455555555555 65321 11111223689888887 6 99775431 11000 02235699999 889999999999
Q ss_pred HHHHHHHHH
Q 013442 415 ALHASLATR 423 (443)
Q Consensus 415 ~~~a~~~~~ 423 (443)
+++..++++
T Consensus 300 ~~~~~~vy~ 308 (309)
T 3tc8_A 300 QTVLEVIYN 308 (309)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 999888864
No 85
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=44.79 E-value=26 Score=32.97 Aligned_cols=56 Identities=14% Similarity=0.064 Sum_probs=41.7
Q ss_pred CCCCchHHHHHhh-cCcEEEEecCCCCCCCCCCCCCCCC---CCCCCCchHHHHHHHHHHHHHHHh
Q 013442 365 LMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPY---FRVNEDALPYGAALHASLATRYLL 426 (443)
Q Consensus 365 ~~g~tDa~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~p~---E~i~i~~l~~~~~~~a~~~~~l~~ 426 (443)
..+.+|-..|.+. +|++.+.-. .. ....|++. +.|+.+.+.+.+++++.++.+|+.
T Consensus 270 ~~~~SDH~pF~~~GIP~~~~~~~-~f-----~~~yHt~~Dt~d~id~~~l~~~~~i~~~fv~Eyl~ 329 (330)
T 3pb6_X 270 GSVEDDHIPFLRRGVPVLHLIST-PF-----PAVWHTPADTEVNLHPPTVHNLCRILAVFLAEYLG 329 (330)
T ss_dssp CCCSCTTHHHHTTTCCEEEEECS-SC-----CTTTTSTTCSGGGSCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCchHhHHHCCCCEEEEEcC-CC-----CCCCCCCcCchhhCCHHHHHHHHHHHHHHHHHHhc
Confidence 3456887777777 997765422 11 23589887 568889999999999999999874
No 86
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=37.64 E-value=24 Score=34.61 Aligned_cols=63 Identities=22% Similarity=0.233 Sum_probs=47.0
Q ss_pred CCCCCCchHHHHHhh-cCcEEEEecCCCCCCCCCCCCCCC---CCCCCCCchHHHHHHHHHHHHHHHhhcC
Q 013442 363 RPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSP---YFRVNEDALPYGAALHASLATRYLLENQ 429 (443)
Q Consensus 363 ~~~~g~tDa~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~p---~E~i~i~~l~~~~~~~a~~~~~l~~~~~ 429 (443)
....+++|...|.+. +|++.+...... .....|++ =++++.+.+.+.+++++.++..+.+.+.
T Consensus 369 ~~~~~~SD~~~f~~~GiP~~~l~~~~~~----~~~~yHt~~Dt~d~id~~~l~~~~~~~~~~v~~lA~~~~ 435 (444)
T 3iib_A 369 NKASGGPDVSMLPALGVPVASLRQDGSD----YFDYHHTPNDTLDKINPEALAQNVAVYAQFAWVMANSKV 435 (444)
T ss_dssp SCCCCCGGGTTSGGGTCCEEEEEECCTT----GGGTTTSTTCCGGGSCHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CCCCCCCccHHHHHCCCCEEEeecCCCc----CCCCCCCCccccccCCHHHHHHHHHHHHHHHHHHhcCCC
Confidence 345678998888877 998765543211 11358998 4678999999999999999999987554
No 87
>3or1_C Sulfite reductase GAMA; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} SCOP: d.203.1.1 PDB: 3or2_C* 2v4j_C* 2xsj_C*
Probab=33.75 E-value=35 Score=26.19 Aligned_cols=38 Identities=8% Similarity=-0.081 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHhCCCCe
Q 013442 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPY 87 (443)
Q Consensus 50 ~~~i~ll~~l~~ipS~s~~E~~~~~~l~~~l~~~G~~~ 87 (443)
+++-+.+.+--.|.+++.+-+++.+||+++.++.|...
T Consensus 27 ee~A~~lA~~egI~eLTe~HW~vI~flR~yY~e~~~~P 64 (105)
T 3or1_C 27 PEWVKYAKGSEGIGAGSADHQKIIDFLQDYYKANGIAP 64 (105)
T ss_dssp HHHHHHHGGGGTCSSCCHHHHHHHHHHHHHHHHHSSCC
T ss_pred HHHHHHHHHHCCCccCCHHHHHHHHHHHHHHHHHCCCC
Confidence 44444444444677787677899999999999988753
No 88
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=32.88 E-value=44 Score=31.16 Aligned_cols=53 Identities=15% Similarity=0.103 Sum_probs=38.4
Q ss_pred CchHHHHHhh-cCcEEEEecCCCCCCCCCCCCCCCC---CCCCCCchHHHHHHHHHHHHHHHh
Q 013442 368 TEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPY---FRVNEDALPYGAALHASLATRYLL 426 (443)
Q Consensus 368 ~tDa~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~p~---E~i~i~~l~~~~~~~a~~~~~l~~ 426 (443)
.+|-..|.+. +|++.+..+.. ....|++. ++++.+.+.+..++++.++.+|+.
T Consensus 272 ~sDh~~F~~~GiP~~~~~~~~~------~~~yHt~~Dt~~~ld~~~l~~~~~~~~~~v~eyl~ 328 (329)
T 2afw_A 272 QDDHIPFLRRGVPVLHLIPSPF------PEVWHTMDDNEENLDESTIDNLNKILQVFVLEYLH 328 (329)
T ss_dssp CSTTHHHHTTTCCEEEECCSSC------CTTTTSTTCSSTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCHhHHHCCCCEEEEEcCCC------CCCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHhc
Confidence 4787777776 99876543321 13588887 456778889999999999998874
No 89
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=31.10 E-value=17 Score=37.67 Aligned_cols=50 Identities=6% Similarity=0.104 Sum_probs=36.7
Q ss_pred ccchHHHHhhcCchhHHHHHHHHHHHHh---CCCC--CcccHHHHHHHHHHHHhCCCCe
Q 013442 34 QIPVKFLDFAKKPEIFYWMVNIRRKIHE---NPEL--GFQEFETSKLIRAELDQMGIPY 87 (443)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~i~ll~~l~~---ipS~--s~~E~~~~~~l~~~l~~~G~~~ 87 (443)
++.+++.+.++.. .+.+.++.|.+ -|.. |..+.++++||.++|+++|++.
T Consensus 6 ~l~~~l~~~i~~~----~i~~~L~~Lssd~~~~R~aGT~g~~~aa~yI~~~f~~~Gl~~ 60 (640)
T 3kas_A 6 DLKRKLSEKLDST----DFTSTIKLLNENSYVPREAGSQKDENLALYVENQFREFKLSK 60 (640)
T ss_dssp HHHHHHHHHHHTC----CHHHHHHHTTSTTTSSCCTTSHHHHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHhCCHH----HHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHHHHcCCcc
Confidence 3455677777764 47777888876 2443 4466889999999999999973
No 90
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=28.76 E-value=1.3e+02 Score=27.59 Aligned_cols=79 Identities=16% Similarity=0.087 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHhcCCccc-ccCCCCCCCchHHHHHh-h-cCcEEEEecCCCCCCCCCCCCCCCCC---CCCCCchHHHH
Q 013442 341 NLHEHFQKVAADMLGVQNI-KENRPLMGTEDFSFFAE-A-IPGYFYYLGMNDETKGKFETGHSPYF---RVNEDALPYGA 414 (443)
Q Consensus 341 ~~~~~~~~~~~~~~g~~~~-~~~~~~~g~tDa~~~~~-~-ip~~~~~~G~~~~~pG~~~~~H~p~E---~i~i~~l~~~~ 414 (443)
.+.+.+.+..... +.... ........++|...|.+ . +|++.+...... -|.....|++.- +|+.+.|+...
T Consensus 222 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~sDh~~F~~~~GIP~l~~~~~~~~--~~~~~~yHT~~Dt~d~id~~~L~~vg 298 (309)
T 4fuu_A 222 DINKKVWKAAKKA-GYGKTFIDERGDTITDDHLFINRLARIKTIDIIPNDPE--TGFPPTWHTIHDNMDHIDKNTLKAVG 298 (309)
T ss_dssp HHHHHHHHHHHHT-TCTTTEEEEECCCCCCHHHHHHHHTCCCEEEECBC------CCCTTTTSTTCSGGGBCHHHHHHHH
T ss_pred HHHHHHHHHHHhc-CCcccccccCCCCCCCChHHHHhcCCCCEEEEeccCCC--CCCCCCCCCcccchhhCCHHHHHHHH
Confidence 4555555555554 43221 11123344678888875 3 997654322111 112235799884 45666666666
Q ss_pred HHHHHHHH
Q 013442 415 ALHASLAT 422 (443)
Q Consensus 415 ~~~a~~~~ 422 (443)
+.+..+++
T Consensus 299 ~~vl~~ly 306 (309)
T 4fuu_A 299 QTVLEVIY 306 (309)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 65555443
No 91
>1ji8_A Dissimilatory siroheme-sulfite reductase; orthogonal helical bundle, structural genomics, PSI, protein structure initiative; NMR {Pyrobaculum aerophilum} SCOP: d.203.1.1
Probab=26.80 E-value=30 Score=26.76 Aligned_cols=37 Identities=8% Similarity=0.097 Sum_probs=29.1
Q ss_pred HHHHHHHH-HHHhCCCCCcccHHHHHHHHHHHHhCCCC
Q 013442 50 YWMVNIRR-KIHENPELGFQEFETSKLIRAELDQMGIP 86 (443)
Q Consensus 50 ~~~i~ll~-~l~~ipS~s~~E~~~~~~l~~~l~~~G~~ 86 (443)
+++-+.+. +--.|++++.+=+++.+||+++.++.|..
T Consensus 32 eevA~~lA~~~egI~eLTe~HW~VI~flR~~Y~e~~~~ 69 (111)
T 1ji8_A 32 EKVAEWLARELEGIQKMTEEHWKLVKYLREYWETFGTC 69 (111)
T ss_dssp HHHHHHHHHHHTCCSSCCHHHHHHHHHHHHHTTTTSCC
T ss_pred HHHHHHHHHhcCCchhcCHHHHHHHHHHHHHHHHHCCC
Confidence 55555555 66688888877799999999999999874
Done!