Query 013444
Match_columns 443
No_of_seqs 403 out of 2973
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 10:41:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013444.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013444hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3stj_A Protease DEGQ; serine p 100.0 7.8E-52 2.7E-56 414.6 36.1 299 125-441 13-336 (345)
2 4a8c_A Periplasmic PH-dependen 100.0 1.3E-49 4.4E-54 410.7 38.2 298 125-440 13-335 (436)
3 1lcy_A HTRA2 serine protease; 100.0 9.9E-50 3.4E-54 396.8 31.5 301 125-438 15-323 (325)
4 1te0_A Protease DEGS; two doma 100.0 1.8E-49 6.1E-54 393.9 31.3 298 125-440 9-316 (318)
5 3qo6_A Protease DO-like 1, chl 100.0 1.7E-49 5.9E-54 398.7 31.0 298 123-440 15-334 (348)
6 3pv2_A DEGQ; trypsin fold, PDZ 100.0 4.1E-49 1.4E-53 408.1 33.2 297 124-438 18-352 (451)
7 3num_A Serine protease HTRA1; 100.0 1.4E-49 4.9E-54 396.9 23.5 303 124-439 13-322 (332)
8 1y8t_A Hypothetical protein RV 100.0 6.4E-47 2.2E-51 376.5 35.6 295 125-440 6-315 (324)
9 1ky9_A Protease DO, DEGP, HTRA 100.0 1.3E-47 4.6E-52 396.4 25.8 295 126-438 14-356 (448)
10 4fln_A Protease DO-like 2, chl 100.0 4.4E-46 1.5E-50 389.1 35.5 287 133-440 45-358 (539)
11 1l1j_A Heat shock protease HTR 100.0 2.7E-36 9.1E-41 287.2 16.7 211 125-343 4-239 (239)
12 3sti_A Protease DEGQ; serine p 100.0 3.7E-35 1.3E-39 280.0 19.8 205 125-340 13-241 (245)
13 3lgi_A Protease DEGS; stress-s 100.0 7.3E-34 2.5E-38 270.2 23.4 207 124-341 19-234 (237)
14 3tjo_A Serine protease HTRA1; 100.0 1.3E-33 4.4E-38 267.5 21.3 199 124-332 30-230 (231)
15 3k6y_A Serine protease, possib 100.0 1.7E-30 5.8E-35 246.8 22.9 194 128-336 34-230 (237)
16 2as9_A Serine protease; trypsi 99.9 5.6E-22 1.9E-26 184.6 15.7 158 155-332 23-203 (210)
17 2w5e_A Putative serine proteas 99.9 1.7E-21 5.8E-26 174.0 16.9 135 154-319 20-155 (163)
18 1agj_A Epidermolytic toxin A; 99.9 7.8E-21 2.7E-25 180.5 16.9 170 134-329 42-239 (242)
19 2o8l_A V8 protease, taphylococ 99.8 3.2E-19 1.1E-23 172.8 20.7 177 133-332 17-211 (274)
20 2w7s_A Serine protease SPLA; h 99.8 3.6E-20 1.2E-24 170.7 13.4 156 155-329 22-196 (200)
21 1wcz_A Glutamyl endopeptidase; 99.8 6.7E-19 2.3E-23 169.9 20.3 177 133-332 17-211 (268)
22 2l97_A HTRA, putative serine p 99.8 6.9E-21 2.4E-25 164.8 5.0 123 312-440 2-128 (134)
23 2vid_A Serine protease SPLB; h 99.8 8.7E-19 3E-23 161.5 17.0 156 155-330 22-201 (204)
24 2h5c_A Alpha-lytic protease; s 99.8 1.6E-18 5.6E-23 159.7 16.1 154 156-327 17-191 (198)
25 1qtf_A Exfoliative toxin B; se 99.8 5.5E-18 1.9E-22 161.4 15.3 135 155-308 48-205 (246)
26 2qa9_E Streptogrisin-B; chymot 99.8 1.5E-17 5.3E-22 151.4 15.9 159 155-328 12-181 (185)
27 1hpg_A Glutamic acid specific 99.7 5.6E-17 1.9E-21 148.1 17.8 155 156-327 13-182 (187)
28 2oua_A Serine protease, protei 99.7 7E-17 2.4E-21 147.6 15.1 152 155-326 14-181 (188)
29 2ea3_A Chymotrypsin; celloulom 99.7 1.3E-15 4.6E-20 139.1 15.9 147 157-327 18-176 (189)
30 2pzd_A Serine protease HTRA2; 99.7 4.4E-16 1.5E-20 130.3 11.5 103 334-439 1-103 (113)
31 2sga_A Proteinase A; hydrolase 99.7 6.3E-16 2.2E-20 140.2 12.2 151 155-327 12-176 (181)
32 2p3w_A Probable serine proteas 99.6 6E-16 2.1E-20 129.3 10.6 103 334-439 1-103 (112)
33 2pfe_A Protease A, alkaline se 99.6 1.2E-15 4.2E-20 139.0 12.2 149 157-327 17-179 (186)
34 1mbm_A NSP4 proteinase, chymot 99.6 3.6E-15 1.2E-19 132.2 12.1 125 135-306 3-130 (198)
35 4ag1_A Chymase; hydrolase-de n 99.6 5.1E-13 1.7E-17 124.7 25.0 183 134-332 11-224 (226)
36 1cgh_A Cathepsin G; inflammati 99.6 2.3E-13 7.8E-18 127.3 21.2 182 134-332 11-223 (224)
37 1pq7_A Trypsin; ultra-high res 99.6 1.4E-13 4.7E-18 128.7 18.2 181 134-329 11-222 (224)
38 3rp2_A RAT MAST cell protease 99.5 8.5E-13 2.9E-17 123.0 22.9 182 134-331 11-223 (224)
39 1iau_A Granzyme B; hydrolase-h 99.5 7E-13 2.4E-17 124.1 21.6 181 135-332 12-225 (227)
40 1fuj_A PR3, myeloblastin; hydr 99.5 7E-13 2.4E-17 123.5 20.3 177 134-331 11-220 (221)
41 1a7s_A Heparin binding protein 99.5 1.1E-12 3.7E-17 122.6 20.8 178 134-334 11-220 (225)
42 4e7n_A Snake-venom thrombin-li 99.5 1.4E-12 4.7E-17 122.6 21.2 184 134-334 11-231 (238)
43 2aiq_A Protein C activator; sn 99.5 7.7E-13 2.6E-17 124.2 18.9 179 135-333 12-223 (231)
44 3s9c_A Vipera russelli protein 99.5 2.2E-12 7.6E-17 120.9 22.0 182 134-334 11-227 (234)
45 1npm_A Neuropsin; serine prote 99.5 1.4E-12 4.8E-17 122.0 20.4 177 134-331 11-224 (225)
46 1p3c_A Glutamyl-endopeptidase; 99.5 1.2E-13 4.2E-18 128.1 13.1 160 155-331 30-213 (215)
47 3fzz_A Granzyme C; hydrolase, 99.5 1.7E-12 5.6E-17 121.2 20.7 183 134-332 11-226 (227)
48 1fxy_A Coagulation factor XA-t 99.5 8.8E-13 3E-17 123.6 18.5 180 135-332 12-225 (228)
49 1hj8_A Trypsin I; hydrolase, r 99.5 1.4E-12 4.8E-17 121.8 19.4 175 135-331 12-219 (222)
50 1si5_H Scatter factor, hepatoc 99.5 4.7E-12 1.6E-16 119.5 23.2 186 134-334 10-229 (240)
51 2xw9_A Complement factor D; im 99.5 1.9E-12 6.6E-17 121.0 20.2 182 134-331 11-227 (228)
52 1ym0_A Fibrinotic enzyme compo 99.5 3.7E-12 1.3E-16 119.8 22.0 185 135-332 12-236 (238)
53 3ncl_A Suppressor of tumorigen 99.5 1.6E-12 5.5E-17 122.3 19.3 189 134-330 11-238 (241)
54 1azz_A Collagenase; complex (s 99.5 8.3E-13 2.8E-17 123.7 17.0 179 134-331 11-222 (226)
55 2zch_P Prostate-specific antig 99.5 2.1E-12 7.3E-17 121.5 19.9 179 135-332 12-234 (237)
56 1mza_A Pro-granzyme K; apoptos 99.5 3.3E-12 1.1E-16 120.4 21.2 182 135-331 14-234 (240)
57 3mfj_A Cationic trypsin; serin 99.5 1.7E-12 5.9E-17 121.3 19.0 177 134-332 11-221 (223)
58 1euf_A Duodenase; serine prote 99.5 2.7E-12 9.2E-17 120.2 20.4 181 134-331 11-223 (227)
59 2z7f_E Leukocyte elastase; ser 99.5 1.2E-12 4E-17 121.8 17.8 173 135-331 12-217 (218)
60 1ton_A Tonin; hydrolase(serine 99.5 3.7E-12 1.3E-16 119.7 21.2 176 134-332 11-232 (235)
61 2psx_A Kallikrein-5; zinc inhi 99.5 1.7E-12 5.8E-17 121.5 18.8 179 134-332 11-224 (227)
62 3s69_A Thrombin-like enzyme de 99.5 2.5E-12 8.7E-17 120.4 19.9 181 135-334 12-227 (234)
63 3h7t_A Group 3 allergen smipp- 99.5 1.1E-12 3.9E-17 122.7 17.4 184 134-333 11-230 (235)
64 2bdg_A Kallikrein-4; serine pr 99.5 3.5E-12 1.2E-16 119.2 20.2 176 135-331 12-221 (223)
65 4i8h_A Cationic trypsin, beta- 99.5 2E-12 6.9E-17 120.4 18.5 176 135-332 12-221 (223)
66 1m9u_A Earthworm fibrinolytic 99.5 1.8E-12 6.1E-17 122.3 18.0 183 135-329 12-239 (241)
67 1ao5_A Glandular kallikrein-13 99.5 2E-12 6.7E-17 121.8 18.1 178 134-332 11-234 (237)
68 1lo6_A Kallikrein 6, HK6; seri 99.5 3.7E-12 1.2E-16 119.0 19.8 177 135-332 12-221 (223)
69 1eq9_A Chymotrypsin; FIRE ANT, 99.5 2.5E-12 8.6E-17 120.0 18.4 181 134-330 11-219 (222)
70 1gvz_A Kallikrein-1E2; antigen 99.5 1.6E-12 5.4E-17 122.5 17.1 176 135-331 12-233 (237)
71 1bru_P Elastase, PPE; serine p 99.5 7.9E-12 2.7E-16 118.0 21.7 186 134-332 11-239 (241)
72 3fan_A Non-structural protein; 99.5 1.7E-13 5.7E-18 123.5 9.5 129 134-308 17-146 (213)
73 1orf_A Granzyme A; hydrolase-h 99.5 6.9E-12 2.3E-16 117.9 21.0 178 134-331 11-230 (234)
74 3gov_B MAsp-1; complement, ser 99.4 5.5E-12 1.9E-16 119.2 19.9 189 134-331 11-247 (251)
75 1spj_A Kallikrein 1; serine pr 99.4 5.5E-12 1.9E-16 118.7 19.6 178 134-332 11-235 (238)
76 1gvk_B Elastase 1, peptide inh 99.4 9.5E-12 3.2E-16 117.4 20.8 186 134-332 11-238 (240)
77 2qxi_A Kallikrein-7; S1 pocket 99.4 4E-12 1.4E-16 118.8 17.9 178 134-332 11-221 (224)
78 2any_A Kininogenin, plasma kal 99.4 1E-11 3.4E-16 117.2 20.0 188 134-332 11-236 (241)
79 1elt_A Elastase; serine protei 99.4 8E-12 2.7E-16 117.5 19.2 183 134-329 11-234 (236)
80 3beu_A Trypsin, SGT; beta shee 99.4 1.2E-11 4E-16 115.2 19.9 170 156-332 21-222 (224)
81 2zgc_A Granzyme M; serine prot 99.4 9.7E-12 3.3E-16 117.5 19.6 183 135-333 12-230 (240)
82 2asu_B Hepatocyte growth facto 99.4 8E-12 2.7E-16 117.5 18.8 185 135-331 9-225 (234)
83 3mhw_U Urokinase-type plasmino 99.4 1.8E-11 6E-16 115.5 21.1 189 134-331 11-245 (247)
84 2oq5_A Transmembrane protease, 99.4 3.1E-11 1E-15 113.2 22.6 182 135-330 12-229 (232)
85 1sgf_A 7S NGF, nerve growth fa 99.4 3.9E-12 1.3E-16 120.1 16.3 179 133-332 13-237 (240)
86 1aut_C Activated protein C; se 99.4 6.8E-12 2.3E-16 119.2 18.1 183 135-333 12-240 (250)
87 2hlc_A Collagenase; serine pro 99.4 8.9E-12 3.1E-16 116.7 18.4 184 134-331 11-226 (230)
88 3h7o_A Group 3 allergen smipp- 99.4 3E-12 1E-16 119.5 15.0 187 133-332 9-226 (228)
89 2r0l_A Hepatocyte growth facto 99.4 2.2E-11 7.5E-16 115.3 21.0 184 134-332 11-239 (248)
90 3bg8_A Coagulation factor XIA 99.4 1E-11 3.6E-16 116.9 18.2 187 134-331 11-235 (238)
91 3tvj_B Mannan-binding lectin s 99.4 9.2E-12 3.1E-16 117.0 17.6 182 135-331 12-239 (242)
92 1t8o_A Chymotrypsin A; chymotr 99.4 1.2E-11 4E-16 117.2 18.1 182 134-332 26-243 (245)
93 2i4s_A General secretion pathw 99.4 6.5E-13 2.2E-17 109.5 7.9 101 320-436 4-105 (105)
94 1rtf_B (TC)-T-PA, two chain ti 99.4 5.2E-11 1.8E-15 112.9 22.2 189 134-330 11-249 (252)
95 1ddj_A Plasminogen; catalytic 99.4 3.9E-11 1.3E-15 113.7 21.2 186 134-332 28-245 (247)
96 2olg_A Pro-phenoloxidase activ 99.4 3.5E-11 1.2E-15 116.0 20.7 190 134-329 33-274 (278)
97 2jde_A Urokinase-type plasmino 99.4 3.9E-11 1.3E-15 115.4 21.0 190 133-331 33-268 (276)
98 2f91_A Hepatopancreas trypsin; 99.4 3.2E-11 1.1E-15 113.5 19.9 187 134-329 11-234 (237)
99 3rm2_H Thrombin heavy chain; s 99.4 9.8E-12 3.4E-16 118.0 16.3 191 135-332 12-255 (259)
100 3gyl_B Prostasin; ENAC, zymoge 99.4 2E-11 6.9E-16 116.2 18.2 184 135-332 12-242 (261)
101 2jkh_A Activated factor XA hea 99.4 9.5E-12 3.3E-16 117.4 15.4 182 135-332 12-233 (241)
102 2bdy_A Thrombin; thrombin, com 99.4 1.9E-11 6.4E-16 118.8 17.8 192 134-332 41-285 (289)
103 1pyt_D TC, PCPA-TC, chymotryps 99.4 3.8E-11 1.3E-15 114.0 19.5 184 134-330 24-248 (251)
104 2f9n_A Alpha I tryptase; serin 99.3 1.8E-11 6E-16 115.8 16.5 188 134-331 11-241 (245)
105 4dgj_A Enteropeptidase catalyt 99.3 2.2E-11 7.5E-16 114.2 16.9 183 134-329 11-232 (235)
106 1fiw_A Beta-acrosin heavy chai 99.3 9.3E-11 3.2E-15 114.0 21.9 191 134-332 11-249 (290)
107 2qy0_B Complement C1R subcompo 99.3 1.1E-11 3.7E-16 116.9 14.8 186 135-332 12-239 (242)
108 1yc0_A Hepatocyte growth facto 99.3 5.1E-11 1.7E-15 115.3 19.8 184 134-332 46-274 (283)
109 4f4o_C Haptoglobin; globin fol 99.3 2.3E-11 7.9E-16 121.4 17.2 190 134-332 113-345 (347)
110 2vz5_A TAX1-binding protein 3; 99.3 9.8E-13 3.4E-17 114.1 5.6 100 332-438 31-135 (139)
111 1fon_A Procarboxypeptidase A-S 99.3 1.1E-11 3.9E-16 116.8 13.4 187 133-332 8-238 (240)
112 3cp7_A Alkaline serine proteas 99.3 2.7E-11 9.3E-16 112.9 15.6 179 134-330 5-214 (218)
113 3i18_A LMO2051 protein; alpha- 99.3 1.4E-11 4.9E-16 100.5 11.6 72 367-440 6-78 (100)
114 2bz6_H Blood coagulation facto 99.3 4.7E-11 1.6E-15 113.5 16.9 185 135-333 12-241 (254)
115 1z8g_A Serine protease hepsin; 99.3 1.2E-10 4E-15 117.4 20.6 187 133-332 127-360 (372)
116 2b9l_A Prophenoloxidase activa 99.3 3.2E-11 1.1E-15 122.4 16.1 197 132-333 139-384 (394)
117 3f1s_B Vitamin K-dependent pro 99.3 4E-11 1.4E-15 116.1 15.3 187 131-333 60-277 (283)
118 2kjp_A Uncharacterized protein 99.3 2.2E-12 7.7E-17 103.5 5.0 70 369-440 2-72 (91)
119 2wph_S Coagulation factor IXA 99.3 4.8E-11 1.6E-15 112.0 14.7 180 135-331 12-232 (235)
120 1zyo_A Serine protease; beta-b 99.3 1.6E-10 5.3E-15 105.1 17.1 160 135-326 15-185 (191)
121 2vnt_A Urokinase-type plasmino 99.3 5.3E-10 1.8E-14 107.3 22.0 191 133-332 33-269 (276)
122 2kl1_A YLBL protein; structure 99.3 1.3E-11 4.5E-16 99.6 8.8 72 367-440 4-76 (94)
123 2i6v_A General secretion pathw 99.2 1.4E-11 4.8E-16 97.9 7.9 68 367-435 18-86 (87)
124 1zjk_A Mannan-binding lectin s 99.2 3.1E-10 1.1E-14 115.3 18.7 184 133-331 171-400 (403)
125 3h5c_B Vitamin K-dependent pro 99.2 1E-10 3.5E-15 115.0 14.5 183 133-331 103-316 (317)
126 1elv_A Complement C1S componen 99.2 2.8E-10 9.7E-15 112.7 17.3 180 133-333 92-326 (333)
127 1wh1_A KIAA1095 protein; PDZ d 99.2 1E-11 3.5E-16 105.4 5.8 88 339-440 32-120 (124)
128 2zpm_A Regulator of sigma E pr 99.2 2.8E-11 9.6E-16 96.7 7.7 69 369-438 5-73 (91)
129 1md8_A C1R complement serine p 99.2 1.3E-10 4.3E-15 115.2 14.0 186 134-331 100-327 (329)
130 2eaq_A LIM domain only protein 99.2 2.3E-11 7.8E-16 97.0 6.0 59 368-427 28-89 (90)
131 3id1_A Regulator of sigma E pr 99.2 7.3E-11 2.5E-15 95.4 8.9 70 370-439 4-75 (95)
132 1arb_A Achromobacter protease 99.2 1.3E-10 4.4E-15 111.7 12.2 151 133-308 20-213 (268)
133 3nxp_A Prethrombin-1; alloster 99.2 8E-11 2.7E-15 120.6 11.5 191 134-331 176-419 (424)
134 1gpz_A Complement C1R componen 99.2 2.8E-10 9.7E-15 115.4 14.2 175 155-331 179-395 (399)
135 2xxl_A GRAM-positive specific 99.2 7.4E-10 2.5E-14 112.8 17.2 189 133-332 128-373 (408)
136 2fcf_A Multiple PDZ domain pro 99.1 7.9E-11 2.7E-15 96.3 7.9 82 337-425 14-98 (103)
137 1uit_A Human discs large 5 pro 99.1 7.1E-12 2.4E-16 105.2 1.6 94 331-431 7-105 (117)
138 4dur_A Plasminogen, serine pro 99.1 1.9E-09 6.5E-14 118.0 19.9 186 134-332 572-789 (791)
139 1qau_A Neuronal nitric oxide s 99.1 2.6E-10 9.1E-15 94.7 9.3 70 367-437 25-97 (112)
140 2eeh_A PDZ domain-containing p 99.1 2.9E-10 1E-14 92.5 9.0 73 338-428 21-95 (100)
141 2vsp_A PDZ domain-containing p 99.1 1.1E-10 3.7E-15 93.3 5.9 59 368-428 27-87 (91)
142 3cyy_A Tight junction protein 99.1 2.5E-10 8.6E-15 91.2 7.9 66 368-435 23-91 (92)
143 3hrz_D Complement factor B; se 99.1 3.6E-10 1.2E-14 123.4 11.7 190 135-334 468-734 (741)
144 2pkt_A PDZ and LIM domain prot 99.1 9.9E-11 3.4E-15 93.5 5.3 60 368-429 27-88 (91)
145 2iwq_A Multiple PDZ domain pro 99.1 2.6E-10 8.8E-15 96.7 8.1 80 338-424 35-117 (123)
146 1rrk_A Complement factor B; BB 99.1 5.4E-10 1.9E-14 116.2 12.1 193 132-334 223-492 (497)
147 3sfj_A TAX1-binding protein 3; 99.1 3.3E-10 1.1E-14 92.7 7.9 84 337-424 17-103 (104)
148 2f83_A Coagulation factor XI; 99.1 1.5E-09 5.1E-14 116.4 15.2 186 133-329 397-620 (625)
149 2rcz_A Tight junction protein 99.0 1.1E-10 3.9E-15 90.7 4.2 56 368-424 21-79 (81)
150 2v90_A PDZ domain-containing p 99.0 1.4E-10 5E-15 93.5 4.9 60 367-428 29-90 (96)
151 2pa1_A PDZ and LIM domain prot 99.0 5.7E-10 1.9E-14 88.3 8.1 60 367-428 25-86 (87)
152 2xrc_A Human complement factor 99.0 2.5E-09 8.5E-14 113.4 15.4 184 133-331 331-555 (565)
153 2w4f_A Protein LAP4; structura 99.0 3.3E-10 1.1E-14 91.5 6.6 81 338-428 13-94 (97)
154 2he4_A Na(+)/H(+) exchange reg 99.0 6E-10 2.1E-14 88.7 7.8 58 367-425 27-86 (90)
155 1w9e_A Syntenin 1; cell adhesi 99.0 4.8E-10 1.6E-14 99.8 7.7 81 337-436 14-96 (166)
156 1v5l_A PDZ and LIM domain 3; a 99.0 3E-10 1E-14 93.0 5.5 60 368-429 29-90 (103)
157 2jxo_A Ezrin-radixin-moesin-bi 99.0 3.8E-10 1.3E-14 91.4 5.5 60 368-428 33-94 (98)
158 2uzc_A Human pdlim5, PDZ and L 99.0 9.2E-10 3.1E-14 87.2 7.3 59 367-427 26-86 (88)
159 2jil_A GRIP1 protein, glutamat 99.0 4.7E-10 1.6E-14 90.6 5.6 60 367-428 31-93 (97)
160 3rle_A Golgi reassembly-stacki 99.0 3.8E-10 1.3E-14 104.5 5.6 88 338-438 94-183 (209)
161 3tsv_A Tight junction protein 99.0 9.5E-10 3.3E-14 93.3 7.6 60 368-428 51-113 (124)
162 1wf7_A Enigma homologue protei 99.0 2.3E-10 7.9E-15 93.6 3.5 70 367-438 28-99 (103)
163 1b8q_A Protein (neuronal nitri 98.9 5.6E-10 1.9E-14 94.9 5.4 69 368-437 33-104 (127)
164 2yub_A LIMK-2, LIM domain kina 98.9 2.7E-10 9.2E-15 95.8 3.3 63 367-431 43-109 (118)
165 1wi2_A Riken cDNA 2700099C19; 98.9 1.7E-09 6E-14 88.5 8.0 69 339-424 27-97 (104)
166 2hga_A Conserved protein MTH13 98.9 3.2E-09 1.1E-13 90.1 9.9 65 367-435 24-89 (125)
167 1kwa_A Hcask/LIN-2 protein; PD 98.9 2.1E-09 7.1E-14 85.4 8.2 56 368-424 25-83 (88)
168 2d90_A PDZ domain containing p 98.9 6E-10 2.1E-14 90.9 5.0 62 367-429 29-92 (102)
169 3bpu_A Membrane-associated gua 98.9 2.4E-09 8.3E-14 84.8 8.4 57 368-427 27-86 (88)
170 1vb7_A PDZ and LIM domain 2; P 98.9 4.1E-10 1.4E-14 90.5 3.9 61 367-429 29-91 (94)
171 2o2t_A Multiple PDZ domain pro 98.9 3.4E-10 1.1E-14 94.8 3.5 96 320-429 5-112 (117)
172 2q3g_A PDZ and LIM domain prot 98.9 2E-09 6.8E-14 85.4 7.8 60 367-428 26-87 (89)
173 3khf_A Microtubule-associated 98.9 1.3E-09 4.3E-14 88.4 6.6 57 368-425 34-92 (99)
174 1ihj_A INAD; intermolecular di 98.9 1.2E-09 4.1E-14 88.3 6.5 59 367-427 36-97 (98)
175 1x5q_A LAP4 protein; PDZ domai 98.9 1.8E-09 6.3E-14 89.2 7.6 62 366-429 44-107 (110)
176 4fgm_A Aminopeptidase N family 98.9 1.9E-09 6.5E-14 114.6 9.6 72 368-441 496-568 (597)
177 1n7e_A AMPA receptor interacti 98.9 3.2E-09 1.1E-13 85.7 8.8 59 368-428 30-91 (97)
178 2odp_A Complement C2; C3/C5 co 98.9 1.2E-09 4E-14 114.1 7.8 187 132-332 232-501 (509)
179 2opg_A Multiple PDZ domain pro 98.9 3.2E-09 1.1E-13 85.8 8.6 60 368-429 30-92 (98)
180 1uf1_A KIAA1526 protein; PDZ d 98.9 6.9E-10 2.4E-14 94.5 4.6 68 368-438 46-115 (128)
181 2e7k_A Maguk P55 subfamily mem 98.9 2E-09 6.8E-14 86.1 6.9 68 338-424 17-86 (91)
182 2ego_A General receptor for ph 98.9 3.3E-09 1.1E-13 85.5 8.1 57 367-424 36-94 (96)
183 2awx_A Synapse associated prot 98.9 3E-09 1E-13 87.2 7.7 69 367-437 32-103 (105)
184 2yt7_A Amyloid beta A4 precurs 98.9 4.2E-09 1.4E-13 85.8 8.4 57 368-424 37-97 (101)
185 1ueq_A Membrane associated gua 98.9 7.3E-09 2.5E-13 87.5 9.8 60 367-427 43-106 (123)
186 2i04_A Membrane-associated gua 98.9 4.6E-09 1.6E-13 82.5 7.9 58 367-424 24-85 (85)
187 2vwr_A Ligand of NUMB protein 98.9 4.7E-09 1.6E-13 84.3 8.1 59 368-428 29-90 (95)
188 2vsv_A Rhophilin-2; scaffold p 98.9 3.8E-09 1.3E-13 87.5 7.5 57 368-424 44-102 (109)
189 1g9o_A NHE-RF; PDZ domain, com 98.9 5.3E-09 1.8E-13 83.3 8.1 60 368-428 27-88 (91)
190 2eeg_A PDZ and LIM domain prot 98.9 3.3E-09 1.1E-13 85.2 6.9 60 367-428 31-92 (94)
191 3ngh_A PDZ domain-containing p 98.9 1.3E-09 4.6E-14 89.4 4.6 60 367-428 25-86 (106)
192 1uez_A KIAA1526 protein; PDZ d 98.9 1.7E-09 5.6E-14 88.1 5.1 61 367-428 34-94 (101)
193 4amh_A Disks large homolog 1; 98.9 5.9E-09 2E-13 85.8 8.5 58 367-425 31-91 (106)
194 3r68_A Na(+)/H(+) exchange reg 98.9 3.6E-09 1.2E-13 84.9 7.0 59 368-427 29-89 (95)
195 3kzd_A TIAM-1, T-lymphoma inva 98.9 7.3E-09 2.5E-13 83.2 8.7 69 339-424 20-90 (94)
196 2ejy_A 55 kDa erythrocyte memb 98.9 3.2E-09 1.1E-13 86.0 6.4 56 368-424 36-94 (97)
197 1d5g_A Human phosphatase HPTP1 98.8 6.8E-09 2.3E-13 83.5 8.2 59 367-427 32-93 (96)
198 1rgw_A ZAsp protein; PDZ, cyph 98.8 3.3E-09 1.1E-13 83.3 6.1 59 367-427 24-84 (85)
199 2f5y_A Regulator of G-protein 98.8 6.1E-09 2.1E-13 83.0 7.8 59 368-428 24-84 (91)
200 2kv8_A RGS12, regulator of G-p 98.8 2.5E-09 8.7E-14 83.7 5.4 57 368-425 23-81 (83)
201 2jre_A C60-1 PDZ domain peptid 98.8 2.6E-09 8.9E-14 88.0 5.6 60 367-428 43-105 (108)
202 2kjd_A Sodium/hydrogen exchang 98.8 6.6E-10 2.3E-14 94.5 1.9 63 368-431 33-97 (128)
203 2h2b_A Tight junction protein 98.8 6.1E-09 2.1E-13 85.6 7.6 60 367-428 38-98 (107)
204 2dls_A PDZ-rhogef, RHO guanine 98.8 5.3E-09 1.8E-13 83.8 6.9 55 368-424 29-85 (93)
205 1v5q_A GRIP1 homolog, glutamat 98.8 4.4E-09 1.5E-13 88.8 6.6 61 367-428 44-108 (122)
206 2kom_A Partitioning defective 98.8 7.4E-09 2.5E-13 87.3 8.0 59 368-427 58-120 (121)
207 1nf3_C PAR-6B; semi-CRIB motif 98.8 1.1E-09 3.7E-14 93.3 2.8 59 368-428 65-126 (128)
208 1uep_A Membrane associated gua 98.8 3.9E-09 1.3E-13 86.2 5.9 58 367-424 33-94 (103)
209 1um1_A KIAA1849 protein, RSGI 98.8 1.2E-09 3.9E-14 90.5 2.6 69 367-437 35-106 (110)
210 1x6d_A Interleukin-16; PDZ dom 98.8 2.4E-09 8.1E-14 89.9 4.3 62 367-429 41-105 (119)
211 2fne_A Multiple PDZ domain pro 98.8 1E-08 3.4E-13 86.0 8.1 60 368-429 53-115 (117)
212 1q3o_A Shank1; PDZ, GKAP, pept 98.8 9.5E-09 3.2E-13 84.8 7.8 57 367-424 44-102 (109)
213 2edz_A PDZ domain-containing p 98.8 2.5E-09 8.7E-14 89.1 4.3 64 367-432 37-102 (114)
214 2koj_A Partitioning defective 98.8 1.1E-08 3.6E-13 84.7 8.0 61 367-428 38-102 (111)
215 1v62_A KIAA1719 protein; struc 98.8 5.3E-09 1.8E-13 87.6 6.2 59 368-428 42-103 (117)
216 3cbz_A Dishevelled-2; PDZ doma 98.8 6.5E-09 2.2E-13 85.8 6.6 61 367-428 32-97 (108)
217 2i1n_A Discs, large homolog 3; 98.8 9.7E-09 3.3E-13 83.6 7.6 60 367-428 33-95 (102)
218 3qik_A Phosphatidylinositol 3, 98.8 5.2E-09 1.8E-13 84.7 5.8 57 368-424 39-99 (101)
219 1wha_A KIAA0147 protein, scrib 98.8 9.4E-09 3.2E-13 84.2 7.5 58 367-425 37-97 (105)
220 1x5n_A Harmonin; PDZ domain, u 98.8 1.6E-09 5.6E-14 90.1 2.7 67 367-436 40-109 (114)
221 3rle_A Golgi reassembly-stacki 98.8 5.1E-09 1.7E-13 96.8 6.3 73 365-437 13-88 (209)
222 2dlu_A INAD-like protein; PDZ 98.8 9.5E-09 3.3E-13 85.0 7.2 57 368-425 38-97 (111)
223 1va8_A Maguk P55 subfamily mem 98.8 1.1E-08 3.8E-13 85.1 7.6 59 368-428 48-109 (113)
224 2byg_A Channel associated prot 98.8 1.1E-08 3.6E-13 85.8 7.5 60 367-428 53-115 (117)
225 2jik_A Synaptojanin-2 binding 98.8 1E-08 3.5E-13 83.3 7.1 59 367-427 36-97 (101)
226 2djt_A Unnamed protein product 98.8 6.8E-09 2.3E-13 84.8 6.0 60 367-428 37-99 (104)
227 2fe5_A Presynaptic protein SAP 98.8 1.4E-08 4.8E-13 81.3 7.7 59 367-427 32-93 (94)
228 2qg1_A Multiple PDZ domain pro 98.8 1.5E-08 5.3E-13 80.7 7.9 57 367-424 28-87 (92)
229 2dm8_A INAD-like protein; PDZ 98.8 8.4E-09 2.9E-13 86.0 6.5 59 368-428 43-104 (116)
230 1wi4_A Synip, syntaxin binding 98.8 9E-09 3.1E-13 85.1 6.6 57 368-424 41-103 (109)
231 1wif_A RSGI RUH-020, riken cDN 98.8 7.8E-09 2.7E-13 87.8 6.2 57 368-424 49-109 (126)
232 2q9v_A Membrane-associated gua 98.8 9E-09 3.1E-13 81.7 6.2 57 368-424 27-87 (90)
233 2r4h_A Membrane-associated gua 98.8 1.7E-08 5.7E-13 83.8 8.1 60 367-428 48-110 (112)
234 1yph_C Chymotrypsin A, chain B 98.8 1.1E-07 3.8E-12 80.9 13.4 96 135-247 12-128 (131)
235 1m5z_A GRIP, AMPA receptor int 98.8 1E-08 3.6E-13 81.5 6.5 56 368-424 32-89 (91)
236 2g5m_B Neurabin-2; spinophilin 98.8 2.6E-09 8.9E-14 88.8 3.0 68 367-436 34-104 (113)
237 2dmz_A INAD-like protein; PDZ 98.8 8.3E-09 2.8E-13 87.8 6.2 60 367-428 45-107 (129)
238 1vae_A Rhophilin 2, rhophilin, 98.8 4.9E-09 1.7E-13 87.1 4.6 57 368-424 36-94 (111)
239 1uew_A Membrane associated gua 98.7 1.2E-08 4.2E-13 84.8 6.8 59 368-428 43-104 (114)
240 2gzv_A PRKCA-binding protein; 98.7 1.8E-08 6E-13 84.1 7.6 56 368-424 50-108 (114)
241 3axa_A Afadin, nectin-3, prote 98.7 2E-08 6.7E-13 82.4 7.7 60 367-428 37-99 (106)
242 1mfg_A ERB-B2 interacting prot 98.7 4E-08 1.4E-12 78.8 9.2 57 366-424 33-91 (95)
243 4a8c_A Periplasmic PH-dependen 98.7 3.4E-08 1.2E-12 101.3 10.9 71 368-440 363-433 (436)
244 3i4w_A Disks large homolog 4; 98.7 2.5E-08 8.5E-13 81.3 7.8 56 368-424 35-93 (104)
245 1ujd_A KIAA0559 protein; PDZ d 98.7 1.8E-08 6.1E-13 84.3 7.0 60 367-428 48-110 (117)
246 3qe1_A Sorting nexin-27, G pro 98.7 2.3E-08 7.8E-13 82.1 7.5 56 369-425 44-101 (107)
247 2iwn_A Multiple PDZ domain pro 98.7 2.3E-08 7.7E-13 80.3 7.3 60 367-428 32-94 (97)
248 2iwo_A Multiple PDZ domain pro 98.7 6.8E-09 2.3E-13 87.4 4.2 60 368-429 53-115 (120)
249 2d8i_A T-cell lymphoma invasio 98.7 1.1E-08 3.7E-13 85.4 5.3 54 368-424 44-99 (114)
250 1ujv_A Membrane associated gua 98.7 3.2E-08 1.1E-12 79.8 7.8 58 368-428 32-92 (96)
251 1q7x_A PDZ2B domain of PTP-BAS 98.7 1.3E-08 4.6E-13 83.7 5.7 60 367-428 41-103 (108)
252 2dkr_A LIN-7 homolog B; LIN-7B 98.7 2.7E-08 9.2E-13 79.4 7.3 57 367-424 29-88 (93)
253 3b76_A E3 ubiquitin-protein li 98.7 3.2E-08 1.1E-12 83.0 8.1 57 367-424 52-111 (118)
254 2daz_A INAD-like protein; PDZ 98.7 7.1E-09 2.4E-13 87.7 4.1 60 367-428 50-112 (124)
255 2kpk_A Membrane-associated gua 98.7 2.2E-08 7.6E-13 85.3 7.2 59 368-427 43-105 (129)
256 1whd_A RGS3, regulator of G-pr 98.7 1E-08 3.5E-13 83.3 4.8 57 368-425 36-94 (100)
257 3o46_A Maguk P55 subfamily mem 98.7 2.6E-08 9E-13 79.6 7.1 57 367-424 27-86 (93)
258 1wfg_A Regulating synaptic mem 98.7 2.7E-08 9.4E-13 85.0 7.6 57 368-424 65-125 (131)
259 2edp_A Fragment, shroom family 98.7 1.3E-08 4.3E-13 82.8 5.2 59 368-428 35-95 (100)
260 2yuy_A RHO GTPase activating p 98.7 4.9E-09 1.7E-13 89.0 2.7 60 367-428 60-121 (126)
261 1fc6_A Photosystem II D1 prote 98.7 8.1E-08 2.8E-12 97.1 12.1 71 367-438 98-173 (388)
262 1y7n_A Amyloid beta A4 precurs 98.7 2.4E-08 8.2E-13 79.6 6.5 53 371-424 34-88 (90)
263 3hpk_A Protein interacting wit 98.7 7.5E-09 2.6E-13 87.6 3.7 60 367-427 44-106 (125)
264 1wfv_A Membrane associated gua 98.7 9.4E-09 3.2E-13 83.7 4.0 60 367-428 35-97 (103)
265 1qav_A Alpha-1 syntrophin (res 98.7 4.3E-08 1.5E-12 77.8 7.7 57 367-424 29-88 (90)
266 2qkv_A Inactivation-NO-after-p 98.7 2.2E-08 7.6E-13 80.7 6.1 57 368-425 31-90 (96)
267 2qt5_A Glutamate receptor-inte 98.7 1.8E-08 6.2E-13 92.2 6.1 57 367-424 32-91 (200)
268 2d92_A INAD-like protein; PDZ 98.7 2E-08 7E-13 82.7 5.8 58 367-424 43-103 (108)
269 1tp5_A Presynaptic density pro 98.7 2.2E-08 7.6E-13 83.9 6.0 57 368-424 38-96 (119)
270 2db5_A INAD-like protein; PDZ 98.7 2.3E-08 7.7E-13 85.0 6.1 56 368-424 54-113 (128)
271 1v6b_A Harmonin isoform A1; st 98.7 1.4E-08 4.9E-13 85.1 4.6 62 368-429 43-110 (118)
272 2eno_A Synaptojanin-2-binding 98.7 4.2E-08 1.4E-12 82.3 7.4 60 367-428 46-108 (120)
273 3l4f_D SH3 and multiple ankyri 98.6 6.5E-08 2.2E-12 82.8 8.4 57 367-424 64-122 (132)
274 1uhp_A Hypothetical protein KI 98.6 7.9E-08 2.7E-12 78.9 8.5 57 367-424 40-99 (107)
275 3e17_A Tight junction protein 98.6 4.1E-08 1.4E-12 77.8 6.3 56 368-424 21-79 (88)
276 1wf8_A Neurabin-I; PDZ domain, 98.6 4.1E-08 1.4E-12 80.6 6.5 57 367-424 39-98 (107)
277 3gsl_A Disks large homolog 4; 98.6 4E-08 1.4E-12 89.0 7.0 61 367-429 129-192 (196)
278 2la8_A Inactivation-NO-after-p 98.6 3.2E-08 1.1E-12 81.3 5.7 57 368-425 25-84 (106)
279 3k1r_A Harmonin; protein-prote 98.6 5.7E-08 1.9E-12 88.5 8.0 59 367-428 109-169 (192)
280 3gsl_A Disks large homolog 4; 98.6 6.2E-08 2.1E-12 87.8 8.2 60 367-427 34-95 (196)
281 2edv_A FERM and PDZ domain-con 98.6 2.7E-08 9.2E-13 80.2 5.1 57 367-425 30-88 (96)
282 3mmg_A Nuclear inclusion prote 98.6 3.1E-06 1E-10 78.4 19.4 164 134-321 14-183 (241)
283 1n7t_A 99-MER peptide of densi 98.6 5.5E-08 1.9E-12 79.3 6.8 57 366-424 41-99 (103)
284 3pv2_A DEGQ; trypsin fold, PDZ 98.6 6.1E-08 2.1E-12 99.9 8.8 65 368-434 386-450 (451)
285 2eei_A PDZ domain-containing p 98.6 2.9E-08 9.9E-13 81.3 5.1 59 367-426 31-91 (106)
286 1uju_A Scribble; PDZ domain, c 98.6 1.3E-08 4.5E-13 84.2 3.0 58 366-424 42-102 (111)
287 1p1d_A PDZ45, glutamate recept 98.6 6.9E-08 2.3E-12 88.1 7.8 60 367-427 35-98 (196)
288 1wg6_A Hypothetical protein (r 98.6 3E-08 1E-12 84.3 4.8 59 368-427 55-122 (127)
289 1p1d_A PDZ45, glutamate recept 98.6 6.1E-08 2.1E-12 88.4 7.2 72 339-424 119-193 (196)
290 1i16_A Interleukin 16, LCF; cy 98.6 6.7E-08 2.3E-12 82.4 7.0 58 367-424 56-116 (130)
291 2z17_A Pleckstrin homology SEC 98.6 3.8E-08 1.3E-12 80.4 5.2 55 367-422 47-103 (104)
292 2qbw_A PDZ-fibronectin fusion 98.6 2.8E-07 9.6E-12 83.7 11.6 70 366-437 22-95 (195)
293 4e34_A Golgi-associated PDZ an 98.6 9.1E-08 3.1E-12 75.3 7.1 56 368-424 28-86 (87)
294 2ehr_A INAD-like protein; PDZ 98.6 9E-08 3.1E-12 79.9 7.3 58 367-425 49-109 (117)
295 1ufx_A KIAA1526 protein; PDZ d 98.6 4.8E-08 1.6E-12 79.9 5.3 57 369-425 33-96 (103)
296 3r0h_A INAD, inactivation-NO-a 98.6 1E-07 3.4E-12 87.4 8.1 68 368-436 45-119 (206)
297 2qt5_A Glutamate receptor-inte 98.6 7.2E-08 2.5E-12 88.1 6.9 61 367-429 134-197 (200)
298 3nfk_A Tyrosine-protein phosph 98.6 1.2E-07 4E-12 77.8 7.0 57 368-424 43-106 (107)
299 2cs5_A Tyrosine-protein phosph 98.5 3.6E-08 1.2E-12 82.6 3.5 60 368-428 41-107 (119)
300 3egg_C Spinophilin; PP1, serin 98.5 1.7E-07 6E-12 83.6 7.6 57 367-424 110-169 (170)
301 3tsz_A Tight junction protein 98.5 1.3E-07 4.5E-12 95.5 7.7 59 368-427 31-92 (391)
302 3soe_A Membrane-associated gua 98.5 4.3E-07 1.5E-11 75.3 8.9 58 368-428 34-94 (113)
303 2dc2_A GOPC, golgi associated 98.5 2.5E-07 8.7E-12 75.4 7.3 57 368-425 35-94 (103)
304 2lob_A Golgi-associated PDZ an 97.9 1.6E-08 5.5E-13 84.0 0.0 55 368-423 53-110 (112)
305 2krg_A Na(+)/H(+) exchange reg 98.5 7.7E-09 2.6E-13 96.1 -2.4 61 368-430 33-96 (216)
306 2csj_A TJP2 protein; PDZ domai 98.5 1.6E-07 5.6E-12 78.3 5.9 56 367-424 45-102 (117)
307 1r6j_A Syntenin 1; PDZ, membra 98.5 2.5E-07 8.4E-12 72.4 6.2 52 372-424 27-80 (82)
308 1um7_A Synapse-associated prot 98.4 8.8E-08 3E-12 79.3 3.7 56 368-424 39-97 (113)
309 2pka_B Kallikrein A; serine pr 98.4 9.7E-07 3.3E-11 77.0 10.2 123 208-332 6-149 (152)
310 3r0h_A INAD, inactivation-NO-a 98.4 3.9E-07 1.3E-11 83.4 7.2 57 368-425 136-195 (206)
311 3shw_A Tight junction protein 98.4 4.7E-07 1.6E-11 93.1 7.6 59 368-427 23-84 (468)
312 1ky9_A Protease DO, DEGP, HTRA 98.2 1.3E-07 4.5E-12 97.3 0.0 66 367-434 382-447 (448)
313 3k50_A Putative S41 protease; 98.2 6E-07 2.1E-11 90.9 4.5 57 369-428 91-147 (403)
314 1z87_A Alpha-1-syntrophin; pro 98.2 1.1E-06 3.8E-11 83.7 5.4 57 367-424 102-161 (263)
315 3suz_A Amyloid beta A4 precurs 98.2 5.8E-07 2E-11 90.8 3.4 66 368-434 232-301 (388)
316 1lvm_A Catalytic domain of the 98.2 0.0001 3.6E-09 67.8 17.7 174 133-330 21-201 (229)
317 1k32_A Tricorn protease; prote 98.1 7.8E-06 2.7E-10 92.3 11.3 69 368-437 748-826 (1045)
318 3gge_A PDZ domain-containing p 98.1 1.6E-05 5.6E-10 63.5 9.2 57 368-424 28-88 (95)
319 4fln_A Protease DO-like 2, chl 98.1 1.3E-05 4.5E-10 83.7 10.5 91 340-432 375-477 (539)
320 1w9e_A Syntenin 1; cell adhesi 97.9 1.3E-06 4.5E-11 77.4 -0.7 34 371-404 110-143 (166)
321 2xkx_A Disks large homolog 4; 97.9 2E-05 6.9E-10 85.7 7.9 59 367-427 88-149 (721)
322 2xkx_A Disks large homolog 4; 97.8 2.9E-05 1E-09 84.4 8.5 57 367-424 330-389 (721)
323 3qzr_A 3C protein; chymotrypsi 97.6 0.0094 3.2E-07 53.3 19.1 162 130-320 11-178 (187)
324 3q3y_A HEVB EV93 3C protease; 97.4 0.012 4E-07 52.6 17.8 160 132-320 11-176 (191)
325 3zve_A 3C protease; hydrolase, 97.4 0.0072 2.5E-07 54.3 16.6 157 134-320 11-174 (190)
326 2hal_A Hepatitis A protease 3C 97.3 0.0091 3.1E-07 54.7 16.8 176 128-320 3-204 (212)
327 4dcd_A Protease 3C, genome pol 97.3 0.013 4.5E-07 52.4 16.9 158 133-319 17-180 (190)
328 1cqq_A Type 2 rhinovirus 3C pr 97.3 0.024 8.1E-07 50.5 18.4 157 133-319 10-173 (180)
329 2b0f_A Picornain 3C (protease 97.2 0.011 3.7E-07 52.7 14.8 158 133-320 10-173 (182)
330 2bhg_A Foot-and-mouth disease 97.1 0.012 4.2E-07 53.7 14.8 157 156-327 31-204 (209)
331 2pka_A Kallikrein A; serine pr 97.0 0.0027 9.2E-08 48.5 8.4 34 135-177 12-45 (80)
332 3suz_A Amyloid beta A4 precurs 97.0 9.2E-05 3.2E-09 74.6 0.0 53 371-424 318-372 (388)
333 2ijd_1 Picornain 3C, RNA-direc 96.1 0.43 1.5E-05 50.9 20.5 158 133-320 10-174 (644)
334 1yph_E Chymotrypsin A, chain C 95.1 0.042 1.4E-06 43.5 6.4 49 283-331 41-94 (97)
335 1wxr_A Haemoglobin protease; h 93.1 0.37 1.3E-05 53.4 10.4 80 155-247 56-145 (1048)
336 4ash_A NS6 protease; hydrolase 93.0 3.4 0.00012 35.0 13.9 142 155-317 15-172 (185)
337 2yew_A Capsid protein, coat pr 92.3 0.15 5.2E-06 45.8 5.0 34 281-314 197-230 (253)
338 1ep5_B Capsid protein C, coat 92.1 0.33 1.1E-05 40.0 6.4 34 279-312 98-131 (157)
339 1svp_A Sindbis virus capsid pr 92.1 0.2 6.8E-06 41.5 5.1 33 280-312 101-133 (161)
340 1vcp_A Semliki forest virus ca 92.0 0.39 1.3E-05 39.1 6.6 34 279-312 91-124 (149)
341 4agk_A Capsid protein, coat pr 91.8 0.41 1.4E-05 39.5 6.6 32 280-311 100-131 (158)
342 1kxf_A Sindbis virus capsid pr 91.6 0.19 6.4E-06 45.6 4.8 34 281-314 207-240 (264)
343 3e90_B NS3 protease; trypsin-l 90.5 0.68 2.3E-05 40.7 7.1 135 133-308 21-158 (198)
344 3u1j_B Serine protease NS3; se 90.2 0.81 2.8E-05 40.1 7.3 135 133-308 26-163 (191)
345 2ggv_B NS3, non-structural pro 89.5 0.34 1.2E-05 42.2 4.5 135 133-308 16-153 (185)
346 2fp7_B Serine protease NS3; fl 89.5 0.23 7.9E-06 42.8 3.3 133 134-307 3-138 (172)
347 3lkw_A Fusion protein of nonst 89.2 0.94 3.2E-05 41.0 7.2 131 137-308 71-204 (236)
348 2fom_B Polyprotein; flavivirus 88.9 0.27 9.2E-06 43.0 3.4 135 132-307 16-153 (185)
349 2fyq_A Chymotrypsin-like cyste 87.7 7 0.00024 33.3 11.2 144 155-318 26-184 (194)
350 3su6_A NS3 protease, NS4A prot 71.1 6.5 0.00022 34.4 5.5 42 283-324 154-197 (203)
351 3dor_A Protein CT_858, CPAF; m 59.4 16 0.00056 37.9 6.9 63 369-435 97-183 (583)
352 3s6n_G Small nuclear ribonucle 56.1 19 0.00066 26.6 5.2 34 186-219 14-47 (76)
353 1d3b_B Protein (small nuclear 55.7 18 0.00062 27.7 5.1 34 186-219 14-47 (91)
354 1h64_1 SnRNP SM-like protein; 55.0 24 0.00081 25.9 5.5 34 186-219 14-47 (75)
355 1i4k_A Putative snRNP SM-like 54.3 22 0.00076 26.2 5.3 34 186-219 14-47 (77)
356 1th7_A SnRNP-2, small nuclear 53.3 22 0.00076 26.5 5.2 34 186-219 19-52 (81)
357 4emk_B U6 snRNA-associated SM- 50.4 26 0.00089 25.7 5.0 33 186-218 14-46 (75)
358 1mgq_A SM-like protein; LSM, R 50.3 26 0.0009 26.3 5.2 34 186-219 25-58 (83)
359 1d3b_A Protein (small nuclear 49.7 33 0.0011 25.2 5.5 34 186-219 15-48 (75)
360 4emk_A U6 snRNA-associated SM- 49.6 29 0.001 26.9 5.4 34 186-219 30-63 (94)
361 4hcz_A PHD finger protein 1; p 49.0 66 0.0023 22.5 6.6 35 186-220 7-41 (58)
362 3s6n_F Small nuclear ribonucle 48.6 30 0.001 26.3 5.3 33 186-218 16-48 (86)
363 4emg_A Probable U6 snRNA-assoc 48.4 28 0.00097 26.9 5.2 34 186-219 19-52 (93)
364 4emk_C U6 snRNA-associated SM- 48.0 28 0.00097 28.0 5.3 34 186-219 33-66 (113)
365 1ljo_A Archaeal SM-like protei 47.2 38 0.0013 24.9 5.6 34 186-219 15-49 (77)
366 2eqj_A Metal-response element- 47.0 69 0.0024 23.1 6.5 36 185-220 16-51 (66)
367 1y96_A Gemin6, SIP2, GEM-assoc 45.9 49 0.0017 25.3 5.9 33 186-218 17-50 (86)
368 1i8f_A Putative snRNP SM-like 45.8 26 0.00088 26.2 4.4 34 186-219 21-54 (81)
369 3bw1_A SMX4 protein, U6 snRNA- 45.0 27 0.00092 27.1 4.6 34 186-219 20-53 (96)
370 1b34_B Protein (small nuclear 43.8 35 0.0012 27.5 5.3 33 187-219 40-72 (118)
371 3pgw_B SM B; protein-RNA compl 43.1 25 0.00084 32.1 4.5 34 186-219 14-47 (231)
372 3by8_A Sensor protein DCUS; hi 42.0 25 0.00086 29.0 4.3 29 291-329 111-139 (142)
373 4emh_A Probable U6 snRNA-assoc 40.1 46 0.0016 26.3 5.3 33 186-218 26-58 (105)
374 1n9r_A SMF, small nuclear ribo 39.0 45 0.0015 25.7 5.0 34 186-219 31-65 (93)
375 1b34_A Protein (small nuclear 38.7 53 0.0018 26.5 5.6 61 186-248 12-73 (119)
376 4esy_A CBS domain containing m 34.4 22 0.00076 29.9 2.8 21 286-306 47-67 (170)
377 2m0o_A PHD finger protein 1; t 34.3 52 0.0018 24.4 4.2 35 186-220 30-64 (79)
378 2fwk_A U6 snRNA-associated SM- 33.2 32 0.0011 28.0 3.3 32 187-218 39-70 (121)
379 1m5q_A SMAP3, small nuclear ri 31.4 79 0.0027 26.0 5.5 34 186-219 10-43 (130)
380 2y9a_D Small nuclear ribonucle 29.7 1.1E+02 0.0039 24.9 6.2 33 186-218 15-47 (126)
381 2e5p_A Protein PHF1, PHD finge 29.5 1.6E+02 0.0054 21.2 6.5 35 186-220 13-47 (68)
382 2o8m_A Protease; NS3, NS4A, vi 27.8 1.1E+02 0.0037 27.0 5.9 42 285-327 146-190 (200)
383 3k6e_A CBS domain protein; str 27.0 36 0.0012 28.4 2.8 21 285-305 45-65 (156)
384 4a4f_A SurviVal of motor neuro 26.4 1.3E+02 0.0045 21.1 5.4 34 186-219 12-46 (64)
385 3k6e_A CBS domain protein; str 25.9 34 0.0012 28.5 2.4 16 291-306 118-133 (156)
386 1p0z_A Sensor kinase CITA; tra 25.8 48 0.0016 26.7 3.3 19 291-309 106-124 (131)
387 3nqr_A Magnesium and cobalt ef 25.6 36 0.0012 26.8 2.5 20 287-306 98-117 (127)
388 3gby_A Uncharacterized protein 24.5 39 0.0013 26.6 2.5 18 289-306 100-117 (128)
389 3lfr_A Putative metal ION tran 24.3 39 0.0013 27.0 2.5 19 288-306 100-118 (136)
390 1z8r_A Coxsackievirus B4 polyp 24.2 97 0.0033 26.5 4.8 30 277-307 114-143 (166)
391 3hf7_A Uncharacterized CBS-dom 23.9 41 0.0014 26.7 2.5 18 289-306 101-118 (130)
392 2e5q_A PHD finger protein 19; 23.8 2E+02 0.0068 20.4 6.0 35 186-220 11-45 (63)
393 3i8n_A Uncharacterized protein 23.6 42 0.0014 26.5 2.5 20 287-306 101-120 (130)
394 3jtf_A Magnesium and cobalt ef 23.4 42 0.0014 26.5 2.4 20 287-306 98-117 (129)
395 3kpb_A Uncharacterized protein 21.7 49 0.0017 25.5 2.5 20 287-306 92-111 (122)
396 2hrv_A 2A cysteine proteinase; 21.4 1.9E+02 0.0064 24.1 5.9 30 277-307 94-123 (142)
397 3lv9_A Putative transporter; C 21.3 49 0.0017 26.7 2.5 20 287-306 117-136 (148)
398 3s6n_E Small nuclear ribonucle 21.0 1.1E+02 0.0039 23.3 4.4 32 188-219 28-63 (92)
399 3oi8_A Uncharacterized protein 21.0 50 0.0017 27.2 2.5 20 287-306 132-151 (156)
400 4dah_A Sporulation kinase D; a 20.9 1.1E+02 0.0038 26.3 5.0 31 291-331 130-160 (217)
401 3lqn_A CBS domain protein; csg 20.1 53 0.0018 26.5 2.5 16 291-306 119-134 (150)
No 1
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=100.00 E-value=7.8e-52 Score=414.64 Aligned_cols=299 Identities=32% Similarity=0.543 Sum_probs=262.5
Q ss_pred hhHHHHHHHhCCceEEEEeccccc----------cccc----------CCcEEEEEEEeCC-CEEEeccccccCCCCCCC
Q 013444 125 DTIANAAARVCPAVVNLSAPREFL----------GILS----------GRGIGSGAIVDAD-GTILTCAHVVVDFHGSRA 183 (443)
Q Consensus 125 ~~~~~~~~~~~pSVV~I~~~~~~~----------~~~~----------~~~~GSGfiI~~~-G~ILTaaHvv~~~~~~~~ 183 (443)
.+++++++++.||||.|.+..... .++. ..+.||||||+++ ||||||+||+.++
T Consensus 13 ~~~~~~~~~~~paVV~I~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~GSGfiI~~~~G~IlTnaHVv~~~----- 87 (345)
T 3stj_A 13 PSLAPMLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQA----- 87 (345)
T ss_dssp CBSHHHHHHHGGGEEEEEEEEC------------------------CCEEEEEEEEEEETTTTEEEECHHHHTTE-----
T ss_pred CCHHHHHHHhCCcEEEEEEEEeecccccCchhhhhhcccccccccCcccceeEEEEEEECCCCEEEEChHHhCCC-----
Confidence 468999999999999998764321 1211 1478999999998 9999999999874
Q ss_pred CCCceEEEEeCCCcEEEEEEEeecCCCCEEEEEEcCCCCCCccccCCCCCCCCCCEEEEEecCCCCCCceEEEEEEeeec
Q 013444 184 LPKGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINSKTPLPAAKLGTSSKLCPGDWVVAMGCPHSLQNTVTAGIVSCVDR 263 (443)
Q Consensus 184 ~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkl~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~ 263 (443)
..+.|.+.+++.+++++++.|+.+||||||++.+..++++.|+++..++.|++|+++|||.+...+++.|+|+...+
T Consensus 88 ---~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~l~~s~~~~~G~~V~aiG~p~g~~~~vt~G~Vs~~~~ 164 (345)
T 3stj_A 88 ---QKISIQLNDGREFDAKLIGSDDQSDIALLQIQNPSKLTQIAIADSDKLRVGDFAVAVGNPFGLGQTATSGIVSALGR 164 (345)
T ss_dssp ---EEEEEECTTSCEEEEEEEEEETTTTEEEEEESSCCSCCCCCBCCGGGCCTTBEEEEEECGGGCSCEEEEEEEEEEEE
T ss_pred ---CEEEEEeCCCcEEEEEEEEEcCCCCEEEEEEcccCCCceEeecCcccCCCCCEEEEEECCCCCCCcEEeeEEeeecc
Confidence 58999999999999999999999999999998777899999998888999999999999999999999999998877
Q ss_pred CccCCCCCCccceEEEEcccCCCCCccceeeecCCCEEEEEEEEeec---CCCeEEEEeHHHHHHHHHHHHHcCceeeee
Q 013444 264 KSSDLGLGGMRREYLQTDCAINAGNSGGPLVNIDGEIVGINIMKVAA---ADGLSFAVPIDSAAKIIEQFKKNGRVVRPW 340 (443)
Q Consensus 264 ~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvd~~G~VVGI~s~~~~~---~~g~~~aIPi~~i~~~l~~l~~~g~v~rp~ 340 (443)
.... ......++++|+.+++|+|||||||.+|+||||+++.... ..+++|+||++.+++++++|+++|++.|+|
T Consensus 165 ~~~~---~~~~~~~iq~da~i~~GnSGGPLvn~~G~vVGI~s~~~~~~~~~~g~gfaIP~~~~~~~~~~l~~~g~v~~~~ 241 (345)
T 3stj_A 165 SGLN---LEGLENFIQTDASINRGNSGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIKRGL 241 (345)
T ss_dssp CCSS---SSSSCCEEEECSCCCTTCTTCEEECTTSCEEEEEEEEECTTSSCSSCEEEEEHHHHHHHHHHHHHHSSCCCEE
T ss_pred cccC---CCCccCEEEEecccCCCcCccceeCCCCEEEEEEeccccCCCCcceeEEEEehHHHHHHHHHHHhcccccccc
Confidence 5211 1223568999999999999999999999999999987763 357999999999999999999999999999
Q ss_pred cCceeecccHHHHHHhhcCCCCCCCCCCceEEeEECCCCccccCCCCCCCEEEEECCEeeCCHHHHHHHHhc-CCCCeEE
Q 013444 341 LGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEIIEIMGD-RVGEPLK 419 (443)
Q Consensus 341 lGi~~~~~~~~~~~~l~~~~~~~~~~~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s~~dl~~~l~~-~~g~~v~ 419 (443)
||+.++.+++++++.+++. ...|++|.+|.++|||+++||++||+|++|||++|.++.|+..++.. ..|++++
T Consensus 242 lGv~~~~~~~~~a~~~gl~------~~~G~~V~~V~~~spA~~aGL~~GDvI~~ing~~v~~~~~l~~~l~~~~~g~~v~ 315 (345)
T 3stj_A 242 LGIKGTEMSADIAKAFNLD------VQRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELRSRIATTEPGTKVK 315 (345)
T ss_dssp CCEEEEECCHHHHHHTTCS------CCSSEEEEEECTTSHHHHHTCCTTCEECEETTEECSCHHHHHHHHHTSCTTCEEE
T ss_pred cceeeEeecHHHHHhcCCC------CCceEEEEEeccCChHHHcCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEE
Confidence 9999999999999998763 35799999999999999999999999999999999999999999876 6899999
Q ss_pred EEEEECCCeEEEEEEEecCCCC
Q 013444 420 VVVQRANDQLVTLTVIPEEANP 441 (443)
Q Consensus 420 l~v~R~~g~~~~l~v~~~~~~~ 441 (443)
|+|.| +|+.+++++++.+.+.
T Consensus 316 l~v~R-~g~~~~~~v~l~~~~~ 336 (345)
T 3stj_A 316 LGLLR-NGKPLEVEVTLDTSTS 336 (345)
T ss_dssp EEEEE-TTEEEEEEEECEEC--
T ss_pred EEEEE-CCEEEEEEEEEcccCC
Confidence 99999 8999999998876543
No 2
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=100.00 E-value=1.3e-49 Score=410.73 Aligned_cols=298 Identities=32% Similarity=0.541 Sum_probs=262.8
Q ss_pred hhHHHHHHHhCCceEEEEeccccc----------ccc----------cCCcEEEEEEEeCC-CEEEeccccccCCCCCCC
Q 013444 125 DTIANAAARVCPAVVNLSAPREFL----------GIL----------SGRGIGSGAIVDAD-GTILTCAHVVVDFHGSRA 183 (443)
Q Consensus 125 ~~~~~~~~~~~pSVV~I~~~~~~~----------~~~----------~~~~~GSGfiI~~~-G~ILTaaHvv~~~~~~~~ 183 (443)
.+++++++++.||||.|.+..... .++ ...+.||||||+++ ||||||+||+.++
T Consensus 13 ~~~~~~~~~~~paVV~I~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~GSGfii~~~~G~IlTn~Hvv~~a----- 87 (436)
T 4a8c_A 13 PSLAPMLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQA----- 87 (436)
T ss_pred CCHHHHHHhhCCcEEEEEEEEeecccccCcchhhhhcccccccccCCcCceEEEEEEEECCCCEEEECHHHhCCC-----
Confidence 469999999999999998764221 111 12478999999998 9999999999984
Q ss_pred CCCceEEEEeCCCcEEEEEEEeecCCCCEEEEEEcCCCCCCccccCCCCCCCCCCEEEEEecCCCCCCceEEEEEEeeec
Q 013444 184 LPKGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINSKTPLPAAKLGTSSKLCPGDWVVAMGCPHSLQNTVTAGIVSCVDR 263 (443)
Q Consensus 184 ~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkl~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~ 263 (443)
..+.|.+.+++.++|++++.|+.+||||||++.+..++++.|+++..++.|++|+++|||++...+++.|+|+...+
T Consensus 88 ---~~i~V~~~dg~~~~a~vv~~d~~~DlAllkv~~~~~l~~~~l~~s~~~~~G~~v~aiG~P~g~~~~vt~G~vs~~~r 164 (436)
T 4a8c_A 88 ---QKISIQLNDGREFDAKLIGSDDQSDIALLQIQNPSKLTQIAIADSDKLRVGDFAVAVGNPFGLGQTATSGIVSALGR 164 (436)
T ss_pred ---CEEEEEeCCCCEEEEEEEEEcCCCCEEEEEecCCCCCceEeccCcccCCCCCEEEEEEcCCCCCccEEEEEEeeecc
Confidence 58999999999999999999999999999998777899999998889999999999999999999999999998877
Q ss_pred CccCCCCCCccceEEEEcccCCCCCccceeeecCCCEEEEEEEEeec---CCCeEEEEeHHHHHHHHHHHHHcCceeeee
Q 013444 264 KSSDLGLGGMRREYLQTDCAINAGNSGGPLVNIDGEIVGINIMKVAA---ADGLSFAVPIDSAAKIIEQFKKNGRVVRPW 340 (443)
Q Consensus 264 ~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvd~~G~VVGI~s~~~~~---~~g~~~aIPi~~i~~~l~~l~~~g~v~rp~ 340 (443)
... . ...+..++++|+.+++|+|||||||.+|+||||+++.... ..+++|+||++.+++++++|+++|++.|+|
T Consensus 165 ~~~--~-~~~~~~~iq~da~i~~GnSGGPl~n~~G~vvGI~~~~~~~~~~~~g~gfaIP~~~~~~~~~~l~~~g~v~r~~ 241 (436)
T 4a8c_A 165 SGL--N-LEGLENFIQTDASINRGNAGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIKRGL 241 (436)
T ss_pred ccc--C-CCCccCEEEEcCccCCCCCcCcccCCCCEEEEEEeeeccCCCCceeEEEEEehHHHHHHHHHHHhcccccccc
Confidence 521 1 1223578999999999999999999999999999987653 357899999999999999999999999999
Q ss_pred cCceeecccHHHHHHhhcCCCCCCCCCCceEEeEECCCCccccCCCCCCCEEEEECCEeeCCHHHHHHHHhc-CCCCeEE
Q 013444 341 LGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEIIEIMGD-RVGEPLK 419 (443)
Q Consensus 341 lGi~~~~~~~~~~~~l~~~~~~~~~~~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s~~dl~~~l~~-~~g~~v~ 419 (443)
||+.++.+++++++.+++. ...|++|.+|.++|||+++||++||+|++|||++|.+|.++...+.. ..|++++
T Consensus 242 lGv~~~~~~~~~a~~~gl~------~~~G~~V~~V~~~spA~~aGL~~GD~I~~vnG~~v~~~~~l~~~l~~~~~g~~v~ 315 (436)
T 4a8c_A 242 LGIKGTEMSADIAKAFNLD------VQRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELRSRIATTEPGTKVK 315 (436)
T ss_pred CceEecccCHHHHHHhCCC------CCcceEEEEECCCChHHHCCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEE
Confidence 9999999999999988763 35799999999999999999999999999999999999999998875 6789999
Q ss_pred EEEEECCCeEEEEEEEecCCC
Q 013444 420 VVVQRANDQLVTLTVIPEEAN 440 (443)
Q Consensus 420 l~v~R~~g~~~~l~v~~~~~~ 440 (443)
|+|.| +|+.+++++++.+.+
T Consensus 316 l~v~R-~g~~~~~~v~l~~~~ 335 (436)
T 4a8c_A 316 LGLLR-NGKPLEVEVTLDTST 335 (436)
T ss_pred EEEEE-CCEEEEEEEEECCCC
Confidence 99999 889888888876543
No 3
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=100.00 E-value=9.9e-50 Score=396.81 Aligned_cols=301 Identities=44% Similarity=0.694 Sum_probs=250.6
Q ss_pred hhHHHHHHHhCCceEEEEeccc--ccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEE
Q 013444 125 DTIANAAARVCPAVVNLSAPRE--FLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGT 202 (443)
Q Consensus 125 ~~~~~~~~~~~pSVV~I~~~~~--~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~dg~~~~a~ 202 (443)
+.+.++++++.||||+|++... +.+.....+.||||+|+++||||||+||+.+. ..+.|++.+++.++++
T Consensus 15 ~~~~~~~~~~~~sVV~I~~~~~~~~~~~~~~~~~gsG~iI~~~G~IlT~aHvv~~~--------~~i~V~~~~g~~~~a~ 86 (325)
T 1lcy_A 15 NFIADVVEKTAPAVVYIEILDRHPFLGREVPISNGSGFVVAADGLIVTNAHVVADR--------RRVRVRLLSGDTYEAV 86 (325)
T ss_dssp CHHHHHHHHHGGGEEEEEEEEEETTTTEEEEEEEEEEEEEETTTEEEECHHHHTTC--------SEEEEECTTSCEEEEE
T ss_pred hHHHHHHHHhCCcEEEEEEEecCccCCCccccccEEEEEEeCCCEEEECHHHcCCC--------CEEEEEeCCCCEEEEE
Confidence 5689999999999999987532 11111123679999999999999999999874 4789999999999999
Q ss_pred EEeecCCCCEEEEEEcCCCCCCccccCCCCCCCCCCEEEEEecCCCCCCceEEEEEEeeecCccCCCCCCccceEEEEcc
Q 013444 203 VLNADFHSDIAIVKINSKTPLPAAKLGTSSKLCPGDWVVAMGCPHSLQNTVTAGIVSCVDRKSSDLGLGGMRREYLQTDC 282 (443)
Q Consensus 203 vv~~d~~~DlAlLkl~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~d~ 282 (443)
+++.|+.+|||||+++.+..+++++|+++..++.|++|+++|||.+...+++.|+++...+....++.......++++++
T Consensus 87 v~~~d~~~DlAllkl~~~~~~~~~~l~~~~~~~~G~~v~~~G~p~~~~~~v~~G~vs~~~~~~~~~g~~~~~~~~i~~d~ 166 (325)
T 1lcy_A 87 VTAVDPVADIATLRIQTKEPLPTLPLGRSADVRQGEFVVAMGSPFALQNTITSGIVSSAQRPARDLGLPQTNVEYIQTDA 166 (325)
T ss_dssp EEEEETTTTEEEEECCCSSCCCCCCBCCGGGCCTTCEEEECCCTTSSSSCCEEEEBCSCSCC---------CCCCEEESS
T ss_pred EEEECCCCCEEEEEEcCCCCCceEEecccccCCCCCEEEEEECCCCCCCcEEeEEEecccccccccCCCCCCCCEEEEcC
Confidence 99999999999999997677899999887788999999999999998889999999877654322222223356899999
Q ss_pred cCCCCCccceeeecCCCEEEEEEEEeecCCCeEEEEeHHHHHHHHHHHHHc------CceeeeecCceeecccHHHHHHh
Q 013444 283 AINAGNSGGPLVNIDGEIVGINIMKVAAADGLSFAVPIDSAAKIIEQFKKN------GRVVRPWLGLKMLDLNDMIIAQL 356 (443)
Q Consensus 283 ~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~g~~~aIPi~~i~~~l~~l~~~------g~v~rp~lGi~~~~~~~~~~~~l 356 (443)
.+|+|+|||||||.+|+||||++++.. .+++|+||++.+++++++++++ +.+.|+|||+.+..+++.+++++
T Consensus 167 ~~~~G~SGGPl~~~~G~vVGI~s~~~~--~g~~~aip~~~i~~~l~~~~~~~~~~g~~~~~r~~lGv~~~~l~~~~~~~~ 244 (325)
T 1lcy_A 167 AIDFGNAGGPLVNLDGEVIGVNTMKVT--AGISFAIPSDRLREFLHRGEKKNSSSGISGSQRRYIGVMMLTLSPSILAEL 244 (325)
T ss_dssp CCSTTTTTSEEEETTSCEEEEEEEEEE--TTEEEEEEHHHHHHHTCC---------------EECCEEEEECCHHHHHHH
T ss_pred CCCCCCccccEECCCCEEEEEEeEeec--CCeeEEEEHHHHHHHHHHhhhcccccccccccccccceEeecCCHHHHHhh
Confidence 999999999999999999999998764 5799999999999999998764 46789999999999999999999
Q ss_pred hcCCCCCCCCCCceEEeEECCCCccccCCCCCCCEEEEECCEeeCCHHHHHHHHhcCCCCeEEEEEEECCCeEEEEEEEe
Q 013444 357 KERDPSFPNVKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEIIEIMGDRVGEPLKVVVQRANDQLVTLTVIP 436 (443)
Q Consensus 357 ~~~~~~~~~~~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s~~dl~~~l~~~~g~~v~l~v~R~~g~~~~l~v~~ 436 (443)
++....+++...|++|.+|.++|||+++||++||+|++|||++|.+++++.+++.. ++++.|+|+| +|+.+++++++
T Consensus 245 ~l~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GDvI~~ing~~v~~~~~l~~~l~~--~~~v~l~v~R-~g~~~~~~v~~ 321 (325)
T 1lcy_A 245 QLREPSFPDVQHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNAEDVYEAVRT--QSQLAVQIRR-GRETLTLYVTP 321 (325)
T ss_dssp TTSCTTSCCCSSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHHHHHHTT--CSSEEEEEEE-TTEEEEEEECC
T ss_pred CccccccccCCCCeEEEEeCcCChHHHCCCCCCCEEEEECCEEcCCHHHHHHHHhC--CCeEEEEEEE-CCEEEEEEEEE
Confidence 87655556667899999999999999999999999999999999999999998875 5789999999 89999998887
Q ss_pred cC
Q 013444 437 EE 438 (443)
Q Consensus 437 ~~ 438 (443)
..
T Consensus 322 ~~ 323 (325)
T 1lcy_A 322 EV 323 (325)
T ss_dssp EE
T ss_pred ec
Confidence 54
No 4
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=100.00 E-value=1.8e-49 Score=393.95 Aligned_cols=298 Identities=35% Similarity=0.544 Sum_probs=256.8
Q ss_pred hhHHHHHHHhCCceEEEEecccccc---cccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCCCcEEEE
Q 013444 125 DTIANAAARVCPAVVNLSAPREFLG---ILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEG 201 (443)
Q Consensus 125 ~~~~~~~~~~~pSVV~I~~~~~~~~---~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~dg~~~~a 201 (443)
.++.++++++.||||+|.+...... .....+.||||+|+++||||||+||+.+. ..+.|.+.+++.+++
T Consensus 9 ~~~~~~~~~~~~sVV~I~~~~~~~~~~~~~~~~~~gsG~iI~~~G~IlT~aHvv~~~--------~~i~V~~~~g~~~~a 80 (318)
T 1te0_A 9 ASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDA--------DQIIVALQDGRVFEA 80 (318)
T ss_dssp CCCHHHHHHHGGGEEEEEEEEECSSSSCCEEEEEEEEEEECSTTCEEEEEHHHHTTC--------SEEEEECTTSCEEEE
T ss_pred ccHHHHHHhcCCcEEEEEeEeccCCcccccccCccEEEEEEeCCCEEEECHHHcCCC--------CEEEEEeCCCCEEEE
Confidence 3478899999999999998653221 11224789999999989999999999874 478999999999999
Q ss_pred EEEeecCCCCEEEEEEcCCCCCCccccCCCCCCCCCCEEEEEecCCCCCCceEEEEEEeeecCccCCCCCCccceEEEEc
Q 013444 202 TVLNADFHSDIAIVKINSKTPLPAAKLGTSSKLCPGDWVVAMGCPHSLQNTVTAGIVSCVDRKSSDLGLGGMRREYLQTD 281 (443)
Q Consensus 202 ~vv~~d~~~DlAlLkl~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~d 281 (443)
+++++|+.+|||||+++.+..+++++|+++..++.|++|+++|||.+...+++.|+|+...+.... ......+++++
T Consensus 81 ~v~~~d~~~DlAllk~~~~~~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~~~~~g~vs~~~~~~~~---~~~~~~~i~~d 157 (318)
T 1te0_A 81 LLVGSDSLTDLAVLIIKATGGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLN---PTGRQNFLQTD 157 (318)
T ss_dssp EEEEEETTTTEEEEECCCSSCCCCCCCCTTCCCCTTCEEEEECCCSSSSCCEEEEEEEECCCCCCC---TTCSCCSEEES
T ss_pred EEEEeCCCceEEEEEEeCCCCCceEEeeCccCCCCCCEEEEEEcCCCCCCcEEeeEEecccccccC---CCCcCCEEEEC
Confidence 999999999999999987667899999877789999999999999998889999999987654211 11234678999
Q ss_pred ccCCCCCccceeeecCCCEEEEEEEEeec------CCCeEEEEeHHHHHHHHHHHHHcCceeeeecCceeecccHHHHHH
Q 013444 282 CAINAGNSGGPLVNIDGEIVGINIMKVAA------ADGLSFAVPIDSAAKIIEQFKKNGRVVRPWLGLKMLDLNDMIIAQ 355 (443)
Q Consensus 282 ~~i~~G~SGGPlvd~~G~VVGI~s~~~~~------~~g~~~aIPi~~i~~~l~~l~~~g~v~rp~lGi~~~~~~~~~~~~ 355 (443)
+.+|+|+|||||||.+|+||||++++... ..+++|+||++.+++++++|+++|++.|+|||+.++.+++.+++.
T Consensus 158 ~~~~~G~SGGPl~~~~G~vvGI~s~~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~g~~~~~~lGi~~~~~~~~~~~~ 237 (318)
T 1te0_A 158 ASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGYIGIGGREIAPLHAQG 237 (318)
T ss_dssp SCCCTTTTTSEEECTTCCEEEEEECCSSSSSSCCSCCSCEEEEEHHHHHHHHHHHHHHSSCCCEECCEEEEECSCCCSSS
T ss_pred CCCCCCCCcCceECCCCeEEEEEeeeeccCCccccccceEEeccHHHHHHHHHHHHHcCCcccccceeEeeecchhHHHh
Confidence 99999999999999999999999987652 457899999999999999999999999999999999988765554
Q ss_pred hhcCCCCCCCCCCceEEeEECCCCccccCCCCCCCEEEEECCEeeCCHHHHHHHHhc-CCCCeEEEEEEECCCeEEEEEE
Q 013444 356 LKERDPSFPNVKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEIIEIMGD-RVGEPLKVVVQRANDQLVTLTV 434 (443)
Q Consensus 356 l~~~~~~~~~~~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s~~dl~~~l~~-~~g~~v~l~v~R~~g~~~~l~v 434 (443)
+++ ....|++|.+|.++|||+++||++||+|++|||++|.++.++..++.. ..|++++|+|+| +|+.+++++
T Consensus 238 ~g~------~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~l~~~l~~~~~g~~v~l~v~R-~g~~~~~~v 310 (318)
T 1te0_A 238 GGI------DQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMR-DDKQLTLQV 310 (318)
T ss_dssp SCS------SSCCCEEEEEECTTSTTTTTCCCTTCCEEEETTEECCCHHHHHHHHHTSCTTCEEEEEEES-SSCEEEEEE
T ss_pred ccC------CCCCcEEEEEeCCCChHHHCCCCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEEEE-CCEEEEEEE
Confidence 433 235799999999999999999999999999999999999999999987 789999999999 889999999
Q ss_pred EecCCC
Q 013444 435 IPEEAN 440 (443)
Q Consensus 435 ~~~~~~ 440 (443)
++.+.+
T Consensus 311 ~~~~~~ 316 (318)
T 1te0_A 311 TIQEYP 316 (318)
T ss_dssp ECEECC
T ss_pred EEccCC
Confidence 887654
No 5
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=100.00 E-value=1.7e-49 Score=398.66 Aligned_cols=298 Identities=32% Similarity=0.524 Sum_probs=255.5
Q ss_pred CchhHHHHHHHhCCceEEEEecccccccc------cCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCCC
Q 013444 123 GRDTIANAAARVCPAVVNLSAPREFLGIL------SGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDG 196 (443)
Q Consensus 123 ~~~~~~~~~~~~~pSVV~I~~~~~~~~~~------~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~dg 196 (443)
.+....++++++.||||.|.........+ ...+.||||||+++||||||+||+.+. ..+.|.+.++
T Consensus 15 ~e~~~~~~~~~~~~sVV~I~~~~~~~~~~~~~~~~~~~g~GSG~iI~~~G~IlT~aHvv~~~--------~~i~V~~~~g 86 (348)
T 3qo6_A 15 DELATVRLFQENTPSVVYITNLAVRQDAFTLDVLEVPQGSGSGFVWDKQGHIVTNYHVIRGA--------SDLRVTLADQ 86 (348)
T ss_dssp HHHHHHHHHHHHGGGEEEEEEEEEEECSSSCCEEEEEEEEEEEEEEETTTEEEECHHHHTTC--------SEEEEECTTS
T ss_pred chhHHHHHHHHhCCCEEEEEEEeecccccccccccccCceEEEEEEeCCCEEEECHHHhCCC--------cEEEEEECCC
Confidence 35678889999999999999764332221 124679999999999999999999874 5899999999
Q ss_pred cEEEEEEEeecCCCCEEEEEEcCC-CCCCccccCCCCCCCCCCEEEEEecCCCCCCceEEEEEEeeecCccCCCCCCccc
Q 013444 197 RTFEGTVLNADFHSDIAIVKINSK-TPLPAAKLGTSSKLCPGDWVVAMGCPHSLQNTVTAGIVSCVDRKSSDLGLGGMRR 275 (443)
Q Consensus 197 ~~~~a~vv~~d~~~DlAlLkl~~~-~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~~~~~~~~~~~~~ 275 (443)
+.++++++..|+.+||||||++.+ ..+++++|+++..++.|+.|+++|||.+...+++.|+++...+.......+....
T Consensus 87 ~~~~a~~v~~d~~~DlAlLkl~~~~~~~~~i~l~~s~~~~~G~~v~~iG~p~g~~~~~~~g~vs~~~~~~~~~~~~~~~~ 166 (348)
T 3qo6_A 87 TTFDAKVVGFDQDKDVAVLRIDAPKNKLRPIPVGVSADLLVGQKVFAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQ 166 (348)
T ss_dssp CEEEEEEEEEEGGGTEEEEECCCCGGGCCCCCBCCSTTCCTTCEEEEEECGGGCTTEEEEEEEEEEEEEECCSSSSSCEE
T ss_pred CEEEEEEEEEcCcCCEEEEEEcCCCCCceeEEecCcccCCCCCEEEEEECCCCCCCcEeEEEEEeeccccccccCCCccc
Confidence 999999999999999999999865 3678899988888999999999999999888999999998877654433344456
Q ss_pred eEEEEcccCCCCCccceeeecCCCEEEEEEEEeec---CCCeEEEEeHHHHHHHHHHHHHcCceeeeecCceeecccHHH
Q 013444 276 EYLQTDCAINAGNSGGPLVNIDGEIVGINIMKVAA---ADGLSFAVPIDSAAKIIEQFKKNGRVVRPWLGLKMLDLNDMI 352 (443)
Q Consensus 276 ~~i~~d~~i~~G~SGGPlvd~~G~VVGI~s~~~~~---~~g~~~aIPi~~i~~~l~~l~~~g~v~rp~lGi~~~~~~~~~ 352 (443)
.++++++.+|+|+|||||||.+|+||||++++... ..+++|+||++.+++++++++++|++.|||||+++.....
T Consensus 167 ~~i~~da~i~~G~SGGPLvn~~G~vvGI~s~~~~~~~~~~g~gfaiP~~~~~~~~~~l~~~g~~~~~~lGi~~~~~~~-- 244 (348)
T 3qo6_A 167 DVIQTDAAINPGNSGGPLLDSSGTLIGINTAIYSPSGASSGVGFSIPVDTVGGIVDQLVRFGKVTRPILGIKFAPDQS-- 244 (348)
T ss_dssp EEEEECSCCCTTCTTCEEECTTSCEEEEEEEEECSSSSCSSCEEEEEHHHHHHHHHHHHHHSSCCCEECCCEECCTTT--
T ss_pred CEEEEeCCcCCCCcHHHhhCCCCeEEEEEEeeecCCCCcccEEEEEEecchHHHHHHHHhCCceeeeecCcEEccchh--
Confidence 78999999999999999999999999999998753 3679999999999999999999999999999999875321
Q ss_pred HHHhhcCCCCCCCCCCceEEeEECCCCccccCCCCC-----------CCEEEEECCEeeCCHHHHHHHHhc-CCCCeEEE
Q 013444 353 IAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAGFLP-----------SDVVIKFDGKPVQSITEIIEIMGD-RVGEPLKV 420 (443)
Q Consensus 353 ~~~l~~~~~~~~~~~~g~~V~~v~~~spA~~aGl~~-----------GDiI~~vng~~V~s~~dl~~~l~~-~~g~~v~l 420 (443)
.+++ + ..|++|.+|.++|||++|||++ ||+|++|||++|.+|+|+..+|.. +.|++++|
T Consensus 245 ~~~~--------~-~~Gv~V~~V~~~spA~~AGl~~~~~~~~~~l~~GDvI~~ing~~v~~~~dl~~~l~~~~~g~~v~l 315 (348)
T 3qo6_A 245 VEQL--------G-VSGVLVLDAPPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVSNGSDLYRILDQCKVGDEVTV 315 (348)
T ss_dssp TTTT--------T-CSSEEEEECCSSSHHHHHTCCCCEECSSSCEECCCEECEETTBCCSSSHHHHHHHTTCCTTCEEEE
T ss_pred hhhc--------C-CceEEEEEecCCChHHHcCCccccccccCCCCCCCEEEEECCEEeCCHHHHHHHHHhCCCcCEEEE
Confidence 1111 2 2699999999999999999999 999999999999999999999965 77999999
Q ss_pred EEEECCCeEEEEEEEecCCC
Q 013444 421 VVQRANDQLVTLTVIPEEAN 440 (443)
Q Consensus 421 ~v~R~~g~~~~l~v~~~~~~ 440 (443)
+|+| +|+.+++++++.+.+
T Consensus 316 ~v~R-~g~~~~~~v~l~~~~ 334 (348)
T 3qo6_A 316 EVLR-GDHKEKISVTLEPKP 334 (348)
T ss_dssp EEEC-SSSEEEEEEECEECC
T ss_pred EEEE-CCEEEEEEEEEccCC
Confidence 9999 888888888887544
No 6
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=100.00 E-value=4.1e-49 Score=408.08 Aligned_cols=297 Identities=33% Similarity=0.544 Sum_probs=252.6
Q ss_pred chhHHHHHHHhCCceEEEEeccc----------------cccccc------------CCcEEEEEEEeCC-CEEEecccc
Q 013444 124 RDTIANAAARVCPAVVNLSAPRE----------------FLGILS------------GRGIGSGAIVDAD-GTILTCAHV 174 (443)
Q Consensus 124 ~~~~~~~~~~~~pSVV~I~~~~~----------------~~~~~~------------~~~~GSGfiI~~~-G~ILTaaHv 174 (443)
..+++++++++.|+||.|.+... ++.++. ..+.||||||+++ ||||||+||
T Consensus 18 ~~~~~~~~~~~~pavv~i~~~~~~~~~~~~~~~~~~~~~~~~ff~~~~~~~~~~~~~~~~~GSGfiI~~~~G~IlTn~HV 97 (451)
T 3pv2_A 18 MPSMAPVLKNIMPAIVNVAVQGYLPNDVTPPGSAGNDEENQPNNRPPQSRMPEKGRKFESIGSGVIIDPNNGVIITNDHV 97 (451)
T ss_dssp CCCSHHHHHHHGGGEEEEEEEEECCC-----------------------------CEEEEEEEEEEEETTTTEEEECHHH
T ss_pred CCCHHHHHHHhCCcEEEEEEEEeecccCCCccccccchhHHhhcccccccccccCcccceeEEEEEEECCCCEEEEChHH
Confidence 35689999999999999987531 111211 1357999999975 999999999
Q ss_pred ccCCCCCCCCCCceEEEEeCCCcEEEEEEEeecCCCCEEEEEEcCCCCCCccccCCCCCCCCCCEEEEEecCCCCC----
Q 013444 175 VVDFHGSRALPKGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINSKTPLPAAKLGTSSKLCPGDWVVAMGCPHSLQ---- 250 (443)
Q Consensus 175 v~~~~~~~~~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkl~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~---- 250 (443)
|.++ ..+.|.+.|++.++|++++.|+.+||||||++. ..++++.|+++..++.|++|+++|||++..
T Consensus 98 v~~a--------~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~-~~l~~~~l~~s~~~~~G~~V~aiG~P~G~~~~~~ 168 (451)
T 3pv2_A 98 IRNA--------SLITVTLQDGRRLKARLIGGDSETDLAVLKIDA-KNLKSLVIGDSDKLEVGDFVVAIGNPFGLNSFGN 168 (451)
T ss_dssp HTTE--------EEEEEECTTSCEEECEEEEEETTTTEEEEECCC-SSCCCCCBCCGGGCCTTCEEEEEECCCCC-----
T ss_pred hCCC--------CEEEEEEcCCCEEEEEEEecCcCCcEEEEEEcC-cCCceeEecCcccCCCCCEEEEEECCCCcccccc
Confidence 9984 589999999999999999999999999999974 678999999888899999999999999987
Q ss_pred -CceEEEEEEeeecCccCCCCCCccceEEEEcccCCCCCccceeeecCCCEEEEEEEEee---cCCCeEEEEeHHHHHHH
Q 013444 251 -NTVTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAGNSGGPLVNIDGEIVGINIMKVA---AADGLSFAVPIDSAAKI 326 (443)
Q Consensus 251 -~~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvd~~G~VVGI~s~~~~---~~~g~~~aIPi~~i~~~ 326 (443)
.+++.|+|+...+.... ...+..+|++|+.+++|+|||||||.+|+||||+++... ...+++|+||++.++++
T Consensus 169 ~~~vt~Givs~~~r~~~~---~~~~~~~iqtda~i~~GnSGGPl~n~~G~VIGI~t~~~~~~~~~~g~gfaIP~~~~~~~ 245 (451)
T 3pv2_A 169 SQSATFGIVSALKRSDLN---IEGVENFIQTDAAINPGNSGGALVNAKGELIGINTAILSPYGGNVGIGFAIPINMVKDV 245 (451)
T ss_dssp CCEEEEEEEEEEC-------------CCEEESSCCCGGGTTSEEEETTCCEEEEEECCC------CCCEEEEEHHHHHHH
T ss_pred CCceeEEEEeeccccccC---CCCcceEEEEecccCCCCCcCcccCCCCeEEEEEeEeecCCCCccceeeeehhHHHHHH
Confidence 89999999988765211 112356899999999999999999999999999998765 34679999999999999
Q ss_pred HHHHHHcCceeeeecCceeecccHHHHHHhhcCCCCCCCCCCceEEeEECCCCccccCCCCCCCEEEEECCEeeCCHHHH
Q 013444 327 IEQFKKNGRVVRPWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEI 406 (443)
Q Consensus 327 l~~l~~~g~v~rp~lGi~~~~~~~~~~~~l~~~~~~~~~~~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s~~dl 406 (443)
+++|+++|++.|+|||+.++++++++++.+++. ....|++|.+|.++|||+++||++||+|++|||++|.+|.++
T Consensus 246 ~~~l~~~g~v~r~~lGv~~~~~~~~~a~~~gl~-----~~~~G~~V~~V~~~spA~~aGL~~GDvI~~vnG~~v~~~~~l 320 (451)
T 3pv2_A 246 AQQIIKFGSIHRGLMGIFVQHLTPELAQAMGYP-----EDFQGALVSQVNPNSPAELAGLKAGDIITQINDTKITQATQV 320 (451)
T ss_dssp HHHHHHHSSCCCCBCCEEEEECCHHHHHHTTSC-----TTCCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHH
T ss_pred HHHHHhcCCcccccccceEEeccHHHHHhcCCC-----cCCceEEEEecCCCChHHHcCCCCCCEEEEECCEEcCCHHHH
Confidence 999999999999999999999999999988763 222799999999999999999999999999999999999999
Q ss_pred HHHHhc-CCCCeEEEEEEECCCeEEEEEEEecC
Q 013444 407 IEIMGD-RVGEPLKVVVQRANDQLVTLTVIPEE 438 (443)
Q Consensus 407 ~~~l~~-~~g~~v~l~v~R~~g~~~~l~v~~~~ 438 (443)
..++.. ..|++++|+|.| +++.+++++++.+
T Consensus 321 ~~~l~~~~~g~~v~l~V~R-~g~~~~~~v~l~~ 352 (451)
T 3pv2_A 321 KTTISLLRVGSTVKIIVER-DNKPLTLSAVVTD 352 (451)
T ss_dssp HHHHHTSCTTCEEEEEEEE-TTEEEEEEEECBC
T ss_pred HHHHHhcCCCCEEEEEEEE-CCEEEEEEEEEcc
Confidence 998876 789999999999 8999888888764
No 7
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=100.00 E-value=1.4e-49 Score=396.91 Aligned_cols=303 Identities=41% Similarity=0.683 Sum_probs=159.6
Q ss_pred chhHHHHHHHhCCceEEEEeccc--ccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCCCcEEEE
Q 013444 124 RDTIANAAARVCPAVVNLSAPRE--FLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEG 201 (443)
Q Consensus 124 ~~~~~~~~~~~~pSVV~I~~~~~--~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~dg~~~~a 201 (443)
.+.+.++++++.||||+|.+... +.+.....+.||||||+++||||||+||+.+. ..+.|.+.+++.+++
T Consensus 13 ~~~~~~~~~~~~~sVV~I~~~~~~~~~~~~~~~~~GSG~iI~~~G~ILTaaHvv~~~--------~~i~V~~~~g~~~~a 84 (332)
T 3num_A 13 YNFIADVVEKIAPAVVHIELFRKLPFSKREVPVASGSGFIVSEDGLIVTNAHVVTNK--------HRVKVELKNGATYEA 84 (332)
T ss_dssp HCHHHHHHHHHGGGEEEEEEEEECTTSSCEEEEEEEEEEEEETTTEEEECTTTCCTT--------SEEEEEETTSCEEEE
T ss_pred cchHHHHHHHhcCcEEEEEEEeccccCCCcceeeeEEEEEEeCCCEEEEChHHcCCC--------CEEEEEECCCCEEEE
Confidence 47789999999999999998542 22222234789999999999999999999874 588999999999999
Q ss_pred EEEeecCCCCEEEEEEcCCCCCCccccCCCCCCCCCCEEEEEecCCCCCCceEEEEEEeeecCccCCCCCCccceEEEEc
Q 013444 202 TVLNADFHSDIAIVKINSKTPLPAAKLGTSSKLCPGDWVVAMGCPHSLQNTVTAGIVSCVDRKSSDLGLGGMRREYLQTD 281 (443)
Q Consensus 202 ~vv~~d~~~DlAlLkl~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~d 281 (443)
+++..|+.+|||||+++.+..++++.|+++..++.|+.|+++|||.+...+++.|+++...+.............+++++
T Consensus 85 ~~~~~d~~~DlAlL~l~~~~~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~~~~~g~vs~~~~~~~~~~~~~~~~~~i~~d 164 (332)
T 3num_A 85 KIKDVDEKADIALIKIDHQGKLPVLLLGRSSELRPGEFVVAIGSPFSLQNTVTTGIVSTTQRGGKELGLRNSDMDYIQTD 164 (332)
T ss_dssp EEEEEETTTTEEEEEECCSSCCCCCCBCCTTSCCTTCEEEEECC-----CCEEEEEEEEC--------------CCEEES
T ss_pred EEEEecCCCCeEEEEEcCCCCCceeeecCcccCCCCCEEEEEECCCCCCcceeeeEEEeecccccccCcCCCcCCEEEEE
Confidence 99999999999999999877788999988888999999999999999888999999988776543333333345678999
Q ss_pred ccCCCCCccceeeecCCCEEEEEEEEeecCCCeEEEEeHHHHHHHHHHHHH-----cCceeeeecCceeecccHHHHHHh
Q 013444 282 CAINAGNSGGPLVNIDGEIVGINIMKVAAADGLSFAVPIDSAAKIIEQFKK-----NGRVVRPWLGLKMLDLNDMIIAQL 356 (443)
Q Consensus 282 ~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~g~~~aIPi~~i~~~l~~l~~-----~g~v~rp~lGi~~~~~~~~~~~~l 356 (443)
+.+++|+|||||||.+|+||||+++... .+++|+||++.++++++++.+ .+.+.|+|||+.+..+++..++++
T Consensus 165 ~~i~~G~SGGPlv~~~G~vvGI~s~~~~--~g~~~aip~~~i~~~l~~~~~~~~~g~~~~~r~~lGi~~~~~~~~~~~~~ 242 (332)
T 3num_A 165 AIINYGNAGGPLVNLDGEVIGINTLKVT--AGISFAIPSDKIKKFLTESHDRQAKGKAITKKKYIGIRMMSLTSSKAKEL 242 (332)
T ss_dssp SCCCTTTTTSEEEETTSCEEEEEEEEEE--TTEEEEEEHHHHHHHHHHHCC-----------------------------
T ss_pred CCcCCCCcHHHhhCCCCcEEEEEeeEec--ccceEEECHHHHHHHHHHHhhhhccCcccccccccceEEEecCHHHhhhh
Confidence 9999999999999999999999998765 579999999999999998753 234579999999999998888777
Q ss_pred hcCCCCCCCCCCceEEeEECCCCccccCCCCCCCEEEEECCEeeCCHHHHHHHHhcCCCCeEEEEEEECCCeEEEEEEEe
Q 013444 357 KERDPSFPNVKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEIIEIMGDRVGEPLKVVVQRANDQLVTLTVIP 436 (443)
Q Consensus 357 ~~~~~~~~~~~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s~~dl~~~l~~~~g~~v~l~v~R~~g~~~~l~v~~ 436 (443)
......++....|++|.+|.++|||+++||++||+|++|||++|.+++++..++.. |++++|+|.| +|+.+++++++
T Consensus 243 ~~~~~~~~~~~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~~--~~~v~l~v~R-~g~~~~~~v~p 319 (332)
T 3num_A 243 KDRHRDFPDVISGAYIIEVIPDTPAEAGGLKENDVIISINGQSVVSANDVSDVIKR--ESTLNMVVRR-GNEDIMITVIP 319 (332)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhhccccCCCCCceEEEEeccCCChHHcCCCCCCEEEEECCEECCCHHHHHHHHhC--CCeEEEEEEE-CCEEEEEEEEE
Confidence 66544555566799999999999999999999999999999999999999988864 7889999999 88888898888
Q ss_pred cCC
Q 013444 437 EEA 439 (443)
Q Consensus 437 ~~~ 439 (443)
...
T Consensus 320 ~~~ 322 (332)
T 3num_A 320 EEI 322 (332)
T ss_dssp ---
T ss_pred eee
Confidence 653
No 8
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=100.00 E-value=6.4e-47 Score=376.53 Aligned_cols=295 Identities=35% Similarity=0.486 Sum_probs=244.6
Q ss_pred hhHHHHHHHhCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCC-CCCCCceEEEEeCCCcEEEEEE
Q 013444 125 DTIANAAARVCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGS-RALPKGKVDVTLQDGRTFEGTV 203 (443)
Q Consensus 125 ~~~~~~~~~~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~-~~~~~~~i~V~~~dg~~~~a~v 203 (443)
.++.++++++.||||+|.+.... ....||||+|+++||||||+||+.+.... .......+.|.+.+++.+++++
T Consensus 6 ~~~~~~~~~~~~svV~I~~~~~~-----~~~~gsG~iI~~~g~ILT~aHvv~~~~~~~~~~~~~~i~V~~~~g~~~~a~v 80 (324)
T 1y8t_A 6 GSVEQVAAKVVPSVVMLETDLGR-----QSEEGSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSDGRTAPFTV 80 (324)
T ss_dssp CCHHHHHHHHGGGEEEEEEEC---------CEEEEEECCTTSEEEEEHHHHTTCC--------CEEEEEETTCCEECEEE
T ss_pred ccHHHHHHHhcCcEEEEEEEccC-----CCceEEEEEEeCCCEEEEChHHcCCcccccccCCceEEEEEeCCCCEEEEEE
Confidence 45899999999999999876431 23679999999878999999999864200 0000137899999999999999
Q ss_pred EeecCCCCEEEEEEcCCCCCCccccCCCCCCCCCCEEEEEecCCCCCCceEEEEEEeeecCccCC---CCCCccceEEEE
Q 013444 204 LNADFHSDIAIVKINSKTPLPAAKLGTSSKLCPGDWVVAMGCPHSLQNTVTAGIVSCVDRKSSDL---GLGGMRREYLQT 280 (443)
Q Consensus 204 v~~d~~~DlAlLkl~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~~~~~~---~~~~~~~~~i~~ 280 (443)
+.+|+.+|||||+++.+..++++.|+++..++.|++|+++|||.+...+++.|+++...+..... +.......+|++
T Consensus 81 v~~d~~~DlAllkl~~~~~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~~~~~G~vs~~~~~~~~~~~~g~~~~~~~~i~~ 160 (324)
T 1y8t_A 81 VGADPTSDIAVVRVQGVSGLTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQNTVLDAIQT 160 (324)
T ss_dssp EECCTTTTEEEEEECSCCSCCCCEECCSTTCCTTCEEEEEECGGGCTTEEEEEEEEEEEEEECC-------CCCEEEEEE
T ss_pred EEeCCCCCEEEEEECCCCCCceEEecCcccCCCCCEEEEEEcCCCCCCcEeeeEEeecccccccccccCcccccCCEEEE
Confidence 99999999999999976788999998877889999999999999888889999998776543211 111123568999
Q ss_pred cccCCCCCccceeeecCCCEEEEEEEEeec----------CCCeEEEEeHHHHHHHHHHHHHcCceeeeecCceeecccH
Q 013444 281 DCAINAGNSGGPLVNIDGEIVGINIMKVAA----------ADGLSFAVPIDSAAKIIEQFKKNGRVVRPWLGLKMLDLND 350 (443)
Q Consensus 281 d~~i~~G~SGGPlvd~~G~VVGI~s~~~~~----------~~g~~~aIPi~~i~~~l~~l~~~g~v~rp~lGi~~~~~~~ 350 (443)
++.+|+|+|||||||.+|+||||+++.... ..+++|+||++.+++++++|+++|++.++|||+.+...
T Consensus 161 d~~~~~G~SGGPlv~~~G~vvGI~s~~~~~~~~~~~~~~~~~g~~~aIP~~~v~~~l~~l~~~g~~~~~~lGi~~~~~-- 238 (324)
T 1y8t_A 161 DAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADELISTGKASHASLGVQVTND-- 238 (324)
T ss_dssp CSCCCTTCTTEEEECTTSEEEEEEEEECCC-------CCCCSSCEEEEEHHHHHHHHHHHHHHSCCCCEECCEEEESC--
T ss_pred cCCCCCCCccCcEECCCCeEEEEEeeecccCcccccccccccceEEecCHHHHHHHHHHHHHcCCccccccceEeeec--
Confidence 999999999999999999999999987643 24789999999999999999999999999999998643
Q ss_pred HHHHHhhcCCCCCCCCCCceEEeEECCCCccccCCCCCCCEEEEECCEeeCCHHHHHHHHhc-CCCCeEEEEEEECCCeE
Q 013444 351 MIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEIIEIMGD-RVGEPLKVVVQRANDQL 429 (443)
Q Consensus 351 ~~~~~l~~~~~~~~~~~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s~~dl~~~l~~-~~g~~v~l~v~R~~g~~ 429 (443)
....|++|.+|.++|||+++||++||+|++|||++|.+|.++..++.. ..|++++|+|+|.+|+.
T Consensus 239 --------------~~~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~l~~~l~~~~~g~~v~l~v~R~~g~~ 304 (324)
T 1y8t_A 239 --------------KDTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALVAAVRSKAPGATVALTFQDPSGGS 304 (324)
T ss_dssp --------------SSSSSEEEEEECTTSTTTTTTCCTTCEEEEETTEECCSHHHHHHHHHTSCTTCEEEEEEECSSCCE
T ss_pred --------------cCCCceEEEEECCCChHHHcCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEECCCCE
Confidence 124699999999999999999999999999999999999999998876 68999999999945677
Q ss_pred EEEEEEecCCC
Q 013444 430 VTLTVIPEEAN 440 (443)
Q Consensus 430 ~~l~v~~~~~~ 440 (443)
+++++++.+.+
T Consensus 305 ~~~~v~~~~~~ 315 (324)
T 1y8t_A 305 RTVQVTLGKAE 315 (324)
T ss_dssp EEEEEECEEC-
T ss_pred EEEEEEEccCC
Confidence 88888876543
No 9
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=100.00 E-value=1.3e-47 Score=396.44 Aligned_cols=295 Identities=35% Similarity=0.567 Sum_probs=253.5
Q ss_pred hHHHHHHHhCCceEEEEeccc-----------cccccc--------------------------------CCcEEEEEEE
Q 013444 126 TIANAAARVCPAVVNLSAPRE-----------FLGILS--------------------------------GRGIGSGAIV 162 (443)
Q Consensus 126 ~~~~~~~~~~pSVV~I~~~~~-----------~~~~~~--------------------------------~~~~GSGfiI 162 (443)
+++++++++.||||.|.+... +..++. ..+.||||+|
T Consensus 14 ~~~~~~~~~~pavV~i~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GSG~ii 93 (448)
T 1ky9_A 14 SLAPMLEKVMPSVVSINVEGSTTVNTPRMPRNFQQFFGDDSPFCQEGSPFQSSPFCQGGQGGNGGGQQQKFMALGSGVII 93 (448)
T ss_dssp CSHHHHHHHGGGEEEEEEEEEEEECCCCSSCCTTCCCC---------------------------CEEEEEEEEEEEEEE
T ss_pred cHHHHHHHhCCcEEEEEEEEEecccCCccchhhhhhhccccccccccccccccccccccccccccccccccccEEEEEEE
Confidence 589999999999999986421 111111 1257999999
Q ss_pred eCC-CEEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEEEEeecCCCCEEEEEEcCCCCCCccccCCCCCCCCCCEEE
Q 013444 163 DAD-GTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINSKTPLPAAKLGTSSKLCPGDWVV 241 (443)
Q Consensus 163 ~~~-G~ILTaaHvv~~~~~~~~~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkl~~~~~~~~~~l~~s~~~~~G~~V~ 241 (443)
+++ ||||||+||+.++ ..+.|.+.|++.++|++++.|+.+||||||++....+++++|+++..++.|++|+
T Consensus 94 ~~~~g~IlTn~HVv~~a--------~~i~V~~~dg~~~~a~vv~~d~~~DlAvlkv~~~~~~~~~~l~~s~~~~~G~~V~ 165 (448)
T 1ky9_A 94 DADKGYVVTNNHVVDNA--------TVIKVQLSDGRKFDAKMVGKDPRSDIALIQIQNPKNLTAIKMADSDALRVGDYTV 165 (448)
T ss_dssp ETTTTEEEEEHHHHTTE--------EEEEEEETTSCEEEEEEEEEETTTTEEEEEESSCCSCCCCCBCCGGGCCTTCEEE
T ss_pred ECCCCEEEEChHHhCCC--------CEEEEEECCCCEEEEEEEEEcCCCCEEEEEecCCCCCceEEecccccCCCCCEEE
Confidence 987 9999999999874 5899999999999999999999999999999866788999999888899999999
Q ss_pred EEecCCCCCCceEEEEEEeeecCccCCCCCCccceEEEEcccCCCCCccceeeecCCCEEEEEEEEeec---CCCeEEEE
Q 013444 242 AMGCPHSLQNTVTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAGNSGGPLVNIDGEIVGINIMKVAA---ADGLSFAV 318 (443)
Q Consensus 242 ~iG~p~~~~~~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvd~~G~VVGI~s~~~~~---~~g~~~aI 318 (443)
++|||++...+++.|+|+...+.... ...+..+|++|+.+++|+|||||||.+|+||||+++.... ..+++|+|
T Consensus 166 aiG~P~g~~~tvt~Givs~~~r~~~~---~~~~~~~iqtda~i~~GnSGGpl~n~~G~vvGI~~~~~~~~~~~~g~gfaI 242 (448)
T 1ky9_A 166 AIGNPFGLGETVTSGIVSALGRSGLN---AENYENFIQTDAAINRGNAGGALVNLNGELIGINTAILAPDGGNIGIGFAI 242 (448)
T ss_dssp EEECTTSSSCEEEEEEEEEESSCC--------CCCCEEESCCCTTSCCCSEEECTTSCEEEEEECSSTTSCCCSSSEEEE
T ss_pred EEECCCCCCCeEEeEEEeeccccccC---CCCccCEEEEcCCCCCCCCCCeeECCCCEEEEEEEEeecCCCCccceeeee
Confidence 99999999999999999998765211 1123568999999999999999999999999999986542 35789999
Q ss_pred eHHHHHHHHHHHHHcCceeeeecCceeecccHHHHHHhhcCCCCCCCCCCceEEeEECCCCccccCCCCCCCEEEEECCE
Q 013444 319 PIDSAAKIIEQFKKNGRVVRPWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGK 398 (443)
Q Consensus 319 Pi~~i~~~l~~l~~~g~v~rp~lGi~~~~~~~~~~~~l~~~~~~~~~~~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~ 398 (443)
|++.+++++++|+++|++.|+|||+.++++++++++.+++. ...|++|.+|.++|||+++||++||+|++|||+
T Consensus 243 P~~~~~~~~~~l~~~g~v~~~~LGv~~~~~~~~~a~~lgl~------~~~G~~V~~V~~gspA~~AGL~~GDvI~~inG~ 316 (448)
T 1ky9_A 243 PSNMVKNLTSQMVEYGQVKRGELGIMGTELNSELAKAMKVD------AQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGK 316 (448)
T ss_dssp EHHHHHHHHHHHHHHSSCCBCCCCCSCCCTTSHHHHTSCCT------TCCSEECCCCTTCSSSTTTTCCTTCEECBSSSS
T ss_pred ecccchhhHHHHhhhcccceeccccccccccHHHHHHhCCC------CCCceEEEEeccCCHHHHcCCCCCCEEEEECCE
Confidence 99999999999999999999999999999999888887652 247999999999999999999999999999999
Q ss_pred eeCCHHHHHHHHhc-CCCCeEEEEEEECCCeEEEEEEEecC
Q 013444 399 PVQSITEIIEIMGD-RVGEPLKVVVQRANDQLVTLTVIPEE 438 (443)
Q Consensus 399 ~V~s~~dl~~~l~~-~~g~~v~l~v~R~~g~~~~l~v~~~~ 438 (443)
+|.++.++..++.. ..|++++|+|+| +|+.+++++++.+
T Consensus 317 ~v~~~~~l~~~l~~~~~g~~v~l~v~R-~g~~~~~~v~~~~ 356 (448)
T 1ky9_A 317 PISSFAALRAQVGTMPVGSKLTLGLLR-DGKQVNVNLELQQ 356 (448)
T ss_dssp BCCSSHHHHHHTTSSBTTCCCEEEEES-SSCEEECCCC---
T ss_pred EcCCHHHHHHHHHhcCCCCEEEEEEEE-CCEEEEEEEEEec
Confidence 99999999998876 679999999999 7888777776543
No 10
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=100.00 E-value=4.4e-46 Score=389.12 Aligned_cols=287 Identities=26% Similarity=0.372 Sum_probs=238.1
Q ss_pred HhCCceEEEEeccccccc-------ccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeC-CCcEEEEEEE
Q 013444 133 RVCPAVVNLSAPREFLGI-------LSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQ-DGRTFEGTVL 204 (443)
Q Consensus 133 ~~~pSVV~I~~~~~~~~~-------~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~-dg~~~~a~vv 204 (443)
...+|||.|.+.....++ ....+.||||||+ +||||||+|||.++ ..+.|.+. |++.|+|+++
T Consensus 45 ~~~~sVV~I~~~~~~~~~~~Pw~~~~~~~s~GSGfiI~-dG~IlTN~HVV~~a--------~~i~V~~~~dg~~~~A~vv 115 (539)
T 4fln_A 45 SFLNAVVKVYCTHTAPDYSLPWQKQRQFTSTGSAFMIG-DGKLLTNAHCVEHD--------TQVKVKRRGDDRKYVAKVL 115 (539)
T ss_dssp HHHTTEEEEEEEECCBCSSSTTSBCCCEEEEEEEEEEE-TTEEEECGGGGTTE--------EEEEEECTTCCCCEEEEEE
T ss_pred ccCCCeEEEEEEecCCCCCCccccCCccceEEEEEEEE-CCEEEEChHHcCCC--------CeEEEEEccCCEEEEEEEE
Confidence 456899999876433221 2345789999998 68999999999884 58899885 8999999999
Q ss_pred eecCCCCEEEEEEcCCC---CCCccccCCCCCCCCCCEEEEEecCCCCC-CceEEEEEEeeecCccCCCCCCccceEEEE
Q 013444 205 NADFHSDIAIVKINSKT---PLPAAKLGTSSKLCPGDWVVAMGCPHSLQ-NTVTAGIVSCVDRKSSDLGLGGMRREYLQT 280 (443)
Q Consensus 205 ~~d~~~DlAlLkl~~~~---~~~~~~l~~s~~~~~G~~V~~iG~p~~~~-~~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~ 280 (443)
+.|+..||||||++... .++++.+++ .++.|++|+++|+|++.. .+++.|+|+++.+.... .+.....+|++
T Consensus 116 ~~D~~~DLAvLkv~~~~~~~~~~pl~~g~--~~~vGd~V~aiG~P~g~~~~tvT~GIVSa~~r~~~~--~~~~~~~~IQt 191 (539)
T 4fln_A 116 VRGVDCDIALLSVESEDFWKGAEPLRLGH--LPRLQDSVTVVGYPLGGDTISVTKGVVSRIEVTSYA--HGSSDLLGIQI 191 (539)
T ss_dssp EEETTTTEEEEEECCSSSSTTCCCCCBCC--CCCTTCEEEEEECCSSSCCCEEEEEEEEEEEEEECT--TSCCEEEEEEE
T ss_pred EECCCCCEEEEEEeCCcCCcCCceeecCC--cCcCCCeEEEEEcCCCCCCCcEEeEEECcccccccC--CCCcceeEEEE
Confidence 99999999999998642 344566654 467899999999999876 48999999988776432 22334467999
Q ss_pred cccCCCCCccceeeecCCCEEEEEEEEee--cCCCeEEEEeHHHHHHHHHHHHHcCcee-eeecCceeecc-cHHHHHHh
Q 013444 281 DCAINAGNSGGPLVNIDGEIVGINIMKVA--AADGLSFAVPIDSAAKIIEQFKKNGRVV-RPWLGLKMLDL-NDMIIAQL 356 (443)
Q Consensus 281 d~~i~~G~SGGPlvd~~G~VVGI~s~~~~--~~~g~~~aIPi~~i~~~l~~l~~~g~v~-rp~lGi~~~~~-~~~~~~~l 356 (443)
|+++++|+|||||||.+|+||||+++... ...+++|+||++.+++++++|+++|++. |||||+.++++ ++.+++.+
T Consensus 192 DAaInpGnSGGPLvn~~GeVIGIntai~~~~~~~gigfAIP~~~v~~vl~~l~~~G~~~~r~~LGv~~~~~~~~~~~~~~ 271 (539)
T 4fln_A 192 DAAINPGNSGGPAFNDQGECIGVAFQVYRSEETENIGYVIPTTVVSHFLTDYERNGKYTGYPCLGVLLQKLENPALRECL 271 (539)
T ss_dssp SSCCCTTTTTSEEECSSSCEEEEECCCC-----CCCEEEEEHHHHHHHHHHHHTTTSCCCCCBCCEEEEECCCHHHHHHH
T ss_pred EeEecCCCccchhccCCCcEEEEEEEEecCCCCCcceecccHHHHHHHHHHHHHcCeEEeeeecceEEEecCCHHHHHhc
Confidence 99999999999999999999999987653 3468999999999999999999999886 99999999987 67777777
Q ss_pred hcCCCCCCCCCCceEEeEECCCCccccCCCCCCCEEEEECCEeeCCHHH----------HHHHHhc-CCCCeEEEEEEEC
Q 013444 357 KERDPSFPNVKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITE----------IIEIMGD-RVGEPLKVVVQRA 425 (443)
Q Consensus 357 ~~~~~~~~~~~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s~~d----------l~~~l~~-~~g~~v~l~v~R~ 425 (443)
++. ...|++|.+|.++|||+++ |++||+|++|||++|.+..+ |..++.. ++|++++|+|+|
T Consensus 272 ~l~------~~~Gv~V~~V~~~spA~~a-l~~GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~~~~Gd~v~l~v~R- 343 (539)
T 4fln_A 272 KVP------TNEGVLVRRVEPTSDASKV-LKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQKFAGDIAEIGIIR- 343 (539)
T ss_dssp TCS------SSBCEEEEEECTTSGGGGT-CCTTCEEEEETTEECBSSSEEECSTTCEEETHHHHHTSCTTCEEEEEEEE-
T ss_pred CCC------CcCceeeecccCCChHHhC-ccCCCEEEEECCEEeCcCCeeccccchhHHHHHHHHcCCCCCEEEEEEEE-
Confidence 662 3579999999999999987 99999999999999976544 5666655 899999999999
Q ss_pred CCeEEEEEEEecCCC
Q 013444 426 NDQLVTLTVIPEEAN 440 (443)
Q Consensus 426 ~g~~~~l~v~~~~~~ 440 (443)
+|+++++++++.+.+
T Consensus 344 ~Gk~~~v~Vtl~~~~ 358 (539)
T 4fln_A 344 AGEHKKVQVVLRPRV 358 (539)
T ss_dssp TTEEEEEEEECBCCC
T ss_pred CCEEEEEEEEEccCc
Confidence 999999999987654
No 11
>1l1j_A Heat shock protease HTRA; hydrolase, serine proteinase; 2.80A {Thermotoga maritima} SCOP: b.47.1.1
Probab=100.00 E-value=2.7e-36 Score=287.20 Aligned_cols=211 Identities=36% Similarity=0.619 Sum_probs=167.2
Q ss_pred hhHHHHHHHhCCceEEEEeccccc-------------ccc--------cC-CcEEEEEEEeCCCEEEeccccccCCCCCC
Q 013444 125 DTIANAAARVCPAVVNLSAPREFL-------------GIL--------SG-RGIGSGAIVDADGTILTCAHVVVDFHGSR 182 (443)
Q Consensus 125 ~~~~~~~~~~~pSVV~I~~~~~~~-------------~~~--------~~-~~~GSGfiI~~~G~ILTaaHvv~~~~~~~ 182 (443)
.++.++++++.||||.|.+..... .++ .. .+.||||||+++||||||+||+.+.
T Consensus 4 ~~~~~~~~~~~psVV~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsG~iI~~~g~ILTnaHvv~~~---- 79 (239)
T 1l1j_A 4 SPIVNVVEACAPAVVKIDVVKTVKTSFFDPYFEQFFKKWFGELPPGFERQVASLGSGFIFDPEGYILTNYHVVGGA---- 79 (239)
T ss_dssp CHHHHHHHHHGGGEEEEEEECC--CCCCCHHHHHHHHHHCTTSCTTHHHHEEEEEEEEEEETTTEEEEEHHHHSSC----
T ss_pred hhHHHHHHHhCCCEEEEEEEEeecccccccccchhhhhhccccccccccccCceEEEEEEeCCCEEEEChHHhCCC----
Confidence 468999999999999999864221 011 11 4679999999889999999999874
Q ss_pred CCCCceEEEEeCCCcEEEEEEEeecCCCCEEEEEEcCC-CCCCccccCCCCCCCCCCEEEEEecCCCCCCceEEEEEEee
Q 013444 183 ALPKGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINSK-TPLPAAKLGTSSKLCPGDWVVAMGCPHSLQNTVTAGIVSCV 261 (443)
Q Consensus 183 ~~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkl~~~-~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~ 261 (443)
..+.|.+.+++.+++++++.|+.+||||||++.+ ..++++.|+++..++.|++|+++|||.+...+++.|+++..
T Consensus 80 ----~~i~V~~~~g~~~~a~vv~~d~~~DlAllkl~~~~~~~~~~~l~~s~~~~~G~~v~~iG~p~g~~~~vt~Givs~~ 155 (239)
T 1l1j_A 80 ----DNITVTMLDGSKYDAEYIGGDEELDIAVIKIKASDKKFPYLEFGDSDKVKIGEWAIAIGNPLGFQHTVTVGVVSAT 155 (239)
T ss_dssp ----SSCEEECTTSCEEEBCCCEEETTTTEEEEEBCCSSSCCCCCEECCGGGCCTTCEEEEEECTTSSSCEEEEEEEEEE
T ss_pred ----CEEEEEECCCCEEEEEEEEEcCCCCEEEEEEcCCCCCCceEEecCccCCccccEEEEEECCCCCCCcEEEEEEecc
Confidence 4688999999999999999999999999999976 67899999887778999999999999998888999999987
Q ss_pred ecCccCCCCCCccceEEEEcccCCCCCccceeeecCCCEEEEEEEEeec--CCCeEEEEeHHHHHHHHHHHHHcCceeee
Q 013444 262 DRKSSDLGLGGMRREYLQTDCAINAGNSGGPLVNIDGEIVGINIMKVAA--ADGLSFAVPIDSAAKIIEQFKKNGRVVRP 339 (443)
Q Consensus 262 ~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvd~~G~VVGI~s~~~~~--~~g~~~aIPi~~i~~~l~~l~~~g~v~rp 339 (443)
.+.............+|++++.+|+|+|||||||.+|+||||++++... ..+++|+||++.+++++++|+++|++.||
T Consensus 156 ~r~~~~~~~~~~~~~~i~tda~i~~G~SGGPLv~~~G~vvGI~s~~~~~~~~~g~~faIP~~~~~~~~~~l~~~g~v~r~ 235 (239)
T 1l1j_A 156 NRRIPKPDGSGYYVGLIQTDAAINPGNSGGPLLNIHGEVIGINTAIVNPQEAVNLGFAIPINTVKKFLDTILTQKKVEKA 235 (239)
T ss_dssp EEEEECTTSSCEEEEEEEESSCCCTTTTTSEEECSSSEEEEEECCCSCCCSCCSCEEEEEHHHHHHHHGGGCC-------
T ss_pred ccccccCCCccccCCEEEECCCCCCCCccHHhccCCCeEEEEEeeeecCCCcCceEEEEEHHHHHHHHHHHHHCCCCccc
Confidence 7652111101124568999999999999999999999999999987652 24799999999999999999999999999
Q ss_pred ecCc
Q 013444 340 WLGL 343 (443)
Q Consensus 340 ~lGi 343 (443)
|||+
T Consensus 236 ~lGv 239 (239)
T 1l1j_A 236 YLGV 239 (239)
T ss_dssp ----
T ss_pred eeCc
Confidence 9996
No 12
>3sti_A Protease DEGQ; serine protease, PDZ domain, chaperone, hydrolase; 2.60A {Escherichia coli}
Probab=100.00 E-value=3.7e-35 Score=280.01 Aligned_cols=205 Identities=36% Similarity=0.601 Sum_probs=164.4
Q ss_pred hhHHHHHHHhCCceEEEEeccccc----------cccc----------CCcEEEEEEEeCC-CEEEeccccccCCCCCCC
Q 013444 125 DTIANAAARVCPAVVNLSAPREFL----------GILS----------GRGIGSGAIVDAD-GTILTCAHVVVDFHGSRA 183 (443)
Q Consensus 125 ~~~~~~~~~~~pSVV~I~~~~~~~----------~~~~----------~~~~GSGfiI~~~-G~ILTaaHvv~~~~~~~~ 183 (443)
.+++++++++.||||.|.+..... .++. ..+.||||||+++ ||||||+||+.++
T Consensus 13 ~~~~~~~~~~~paVV~I~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~GSGfiI~~~~G~IlTnaHvv~~a----- 87 (245)
T 3sti_A 13 PSLAPMLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQA----- 87 (245)
T ss_dssp CBSHHHHHHHGGGEEEC----------------------------------CCEEEEEETTTTEEEECGGGC--------
T ss_pred CCHHHHHHHhCCceEEEEEEEeeccccccchhhhhhccccccccccccccceEEEEEEeCCCCEEEEcHHHhCCC-----
Confidence 458999999999999998764221 1111 2467999999998 9999999999874
Q ss_pred CCCceEEEEeCCCcEEEEEEEeecCCCCEEEEEEcCCCCCCccccCCCCCCCCCCEEEEEecCCCCCCceEEEEEEeeec
Q 013444 184 LPKGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINSKTPLPAAKLGTSSKLCPGDWVVAMGCPHSLQNTVTAGIVSCVDR 263 (443)
Q Consensus 184 ~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkl~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~ 263 (443)
..+.|.+.+++.+++++++.|+.+||||||++.+..++++.|+++..++.|++|+++|||.+...+++.|+|+...+
T Consensus 88 ---~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~l~~s~~~~~G~~v~aiG~P~g~~~~vt~G~vs~~~~ 164 (245)
T 3sti_A 88 ---QKISIQLNDGREFDAKLIGSDDQSDIALLQIQNPSKLTQIAIADSDKLRVGDFAVAVGNPFGLGQTATSGIVSALGR 164 (245)
T ss_dssp ----CEEEECTTSCEEEEEEEEEETTTTEEEEEESSCCSCCCCCBCCGGGCCTTBEEEEEECGGGSCCEEEEEEEEECSS
T ss_pred ---CEEEEEECCCCEEEEEEEEecCCCCEEEEEeccCCCCceeeecCcCCCCCCCEEEEEECCCCCCCcEEeeEEeeecc
Confidence 57899999999999999999999999999998777889999988888999999999999999999999999998876
Q ss_pred CccCCCCCCccceEEEEcccCCCCCccceeeecCCCEEEEEEEEee---cCCCeEEEEeHHHHHHHHHHHHHcCceeeee
Q 013444 264 KSSDLGLGGMRREYLQTDCAINAGNSGGPLVNIDGEIVGINIMKVA---AADGLSFAVPIDSAAKIIEQFKKNGRVVRPW 340 (443)
Q Consensus 264 ~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvd~~G~VVGI~s~~~~---~~~g~~~aIPi~~i~~~l~~l~~~g~v~rp~ 340 (443)
... .. .....++++|+.+++|+|||||||.+|+||||+++... ...+++|+||++.+++++++|+++|+..++|
T Consensus 165 ~~~--~~-~~~~~~i~tda~i~~G~SGGPLvn~~G~vVGI~s~~~~~~~~~~g~~faIP~~~~~~~~~~l~~~g~~~~~~ 241 (245)
T 3sti_A 165 SGL--NL-EGLENFIQTDASINRGNSGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEILEHH 241 (245)
T ss_dssp CSS--CC-TTCSSCEEESSCCCTTTTTSEEECTTSCEEEEEECCC------CCCEEEEEHHHHHHHHHHHHHHHHHC---
T ss_pred ccc--CC-CCccCEEEEcCCcCCCcchhHeecCCCeEEEEEEeEECCCCCcceEEEEEeHHHHHHHHHHHHHcCCCCCcc
Confidence 521 11 12356799999999999999999999999999998765 3357999999999999999999999887776
No 13
>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A
Probab=100.00 E-value=7.3e-34 Score=270.19 Aligned_cols=207 Identities=39% Similarity=0.593 Sum_probs=174.8
Q ss_pred chhHHHHHHHhCCceEEEEecccccc---cccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCCCcEEE
Q 013444 124 RDTIANAAARVCPAVVNLSAPREFLG---ILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFE 200 (443)
Q Consensus 124 ~~~~~~~~~~~~pSVV~I~~~~~~~~---~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~dg~~~~ 200 (443)
..++.++++++.||||+|........ .....+.||||+|+++||||||+||+.+. ..+.|.+.+++.++
T Consensus 19 ~~~~~~~~~~~~~sVV~I~~~~~~~~~~~~~~~~~~GsG~ii~~~G~IlTaaHvv~~~--------~~~~V~~~~g~~~~ 90 (237)
T 3lgi_A 19 PASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDA--------DQIIVALQDGRVFE 90 (237)
T ss_dssp CCBCHHHHHHHGGGEEEEEEECCTTTCTTSCCEEEEEEEEEEETTTEEEEEHHHHTTC--------SEEEEECTTSCEEE
T ss_pred CcCHHHHHHHhCCcEEEEEEEecccCcccccccceEEEEEEEeCCCEEEEeeeecCCC--------CEEEEEeCCCCEEE
Confidence 34688999999999999998764321 11223679999999999999999999874 58899999999999
Q ss_pred EEEEeecCCCCEEEEEEcCCCCCCccccCCCCCCCCCCEEEEEecCCCCCCceEEEEEEeeecCccCCCCCCccceEEEE
Q 013444 201 GTVLNADFHSDIAIVKINSKTPLPAAKLGTSSKLCPGDWVVAMGCPHSLQNTVTAGIVSCVDRKSSDLGLGGMRREYLQT 280 (443)
Q Consensus 201 a~vv~~d~~~DlAlLkl~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~ 280 (443)
++++..|+.+|||||+++.+..+++++|+++..++.|+.|+++|||.+...+++.|+++...+..... .....++++
T Consensus 91 a~vv~~d~~~DlAll~l~~~~~~~~~~l~~~~~~~~G~~v~~~G~p~~~~~~~~~g~vs~~~~~~~~~---~~~~~~i~~ 167 (237)
T 3lgi_A 91 ALLVGSDSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNP---TGRQNFLQT 167 (237)
T ss_dssp EEEEEEETTTTEEEEECCCSSCCCCCCCCTTCCCCTTBEEEEEECGGGSCSEEEEEEEEEECCSSCCT---TSCSCCEEE
T ss_pred EEEEEEcCCCCEEEEEecCCCCCceEeccCcccCCCCCEEEEEECCCCCCCcEEEEEEEecccccccC---CCcCCEEEE
Confidence 99999999999999999976668899998777889999999999999988899999999877654221 223567899
Q ss_pred cccCCCCCccceeeecCCCEEEEEEEEeec------CCCeEEEEeHHHHHHHHHHHHHcCceeeeec
Q 013444 281 DCAINAGNSGGPLVNIDGEIVGINIMKVAA------ADGLSFAVPIDSAAKIIEQFKKNGRVVRPWL 341 (443)
Q Consensus 281 d~~i~~G~SGGPlvd~~G~VVGI~s~~~~~------~~g~~~aIPi~~i~~~l~~l~~~g~v~rp~l 341 (443)
++.+|+|+|||||||.+|+||||+++.... ..+++|+||++.+++++++|+++|+..++|+
T Consensus 168 d~~i~~G~SGGPlv~~~G~vvGI~s~~~~~~~~~~~~~g~~~aip~~~i~~~~~~l~~~g~~~~~~~ 234 (237)
T 3lgi_A 168 DASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRHHH 234 (237)
T ss_dssp CSCCCTTCTTCEEECTTCCEEEEECCCCCCCTTSCCCCSCEEEEEHHHHHHHHHHHHHHSSCCC---
T ss_pred cCccCCCCchHHeeCCCCeEEEEEeeeeccCCCCcCcCceEEEEEHHHHHHHHHHHHHcCCCCCchh
Confidence 999999999999999999999999987643 4578999999999999999999999887764
No 14
>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A
Probab=100.00 E-value=1.3e-33 Score=267.49 Aligned_cols=199 Identities=45% Similarity=0.718 Sum_probs=164.7
Q ss_pred chhHHHHHHHhCCceEEEEecccc--cccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCCCcEEEE
Q 013444 124 RDTIANAAARVCPAVVNLSAPREF--LGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEG 201 (443)
Q Consensus 124 ~~~~~~~~~~~~pSVV~I~~~~~~--~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~dg~~~~a 201 (443)
.+.++++++++.||||+|.+.... .......+.||||||+++||||||+||+.+. ..+.|.+.+++.+++
T Consensus 30 ~~~~~~~~~~~~~sVV~I~~~~~~~~~~~~~~~~~GSG~iI~~~G~VLTaaHvv~~~--------~~i~V~~~~g~~~~a 101 (231)
T 3tjo_A 30 YNFIADVVEKIAPAVVHIELFRKLPFSKREVPVASGSGFIVSEDGLIVTNAHVVTNK--------HRVKVELKNGATYEA 101 (231)
T ss_dssp SCHHHHHHHHHGGGEEEEEEEEECTTSSCEEEEEEEEEEECSTTCEEEEETTTCCSS--------SEEEEECTTSCEEEE
T ss_pred hhHHHHHHHHhcCcEEEEEEEeccccCCCccccceEEEEEEeCCCEEEEchhcccCC--------ceEEEEcCCCCEEEE
Confidence 467899999999999999986542 1111222679999999989999999999873 589999999999999
Q ss_pred EEEeecCCCCEEEEEEcCCCCCCccccCCCCCCCCCCEEEEEecCCCCCCceEEEEEEeeecCccCCCCCCccceEEEEc
Q 013444 202 TVLNADFHSDIAIVKINSKTPLPAAKLGTSSKLCPGDWVVAMGCPHSLQNTVTAGIVSCVDRKSSDLGLGGMRREYLQTD 281 (443)
Q Consensus 202 ~vv~~d~~~DlAlLkl~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~d 281 (443)
+++..|+.+|||||+++.+..++++.|+++..++.|+.|+++|||.+...+++.|+++...+.............+++++
T Consensus 102 ~v~~~d~~~DlAlL~l~~~~~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~~~~~g~vs~~~~~~~~~~~~~~~~~~i~~d 181 (231)
T 3tjo_A 102 KIKDVDEKADIALIKIDHQGKLPVLLLGRSSELRPGEFVVAIGSPFSLQNTVTTGIVSTTQRGGKELGLRNSDMDYIQTD 181 (231)
T ss_dssp EEEEEETTTTEEEEECCCSSCCCCCCBCCGGGCCTTCEEEEEEEEETTEEEEEEEEEEECC-------------CCEEES
T ss_pred EEEEecCCCCEEEEEecCCCCCCceecCCcCCCCCCCEEEEEECCCCCCCceeeEEEeeccccccccccCCCcccEEEEc
Confidence 99999999999999999777889999988788999999999999999888899999988776543333333345678999
Q ss_pred ccCCCCCccceeeecCCCEEEEEEEEeecCCCeEEEEeHHHHHHHHHHHHH
Q 013444 282 CAINAGNSGGPLVNIDGEIVGINIMKVAAADGLSFAVPIDSAAKIIEQFKK 332 (443)
Q Consensus 282 ~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~g~~~aIPi~~i~~~l~~l~~ 332 (443)
+.+++|+|||||||.+|+||||++++.. .+++|+||++.++++|+++++
T Consensus 182 a~i~~G~SGGPLv~~~G~vVGI~s~~~~--~g~~~aip~~~i~~~l~~~~~ 230 (231)
T 3tjo_A 182 AIINYGNAGGPLVNLDGEVIGINTLKVT--AGISFAIPSDKIKKFLTESHD 230 (231)
T ss_dssp SCCCTTTTTSEEECTTSCEEEEEEEEEE--TTEEEEEEHHHHHHHHHHHHT
T ss_pred CCcCCCCchhHeecCCCeEEEEEeEEec--CCeEEEEEHHHHHHHHHHHhh
Confidence 9999999999999999999999998764 579999999999999999875
No 15
>3k6y_A Serine protease, possible membrane-associated serine protease; oxidative stress, disulfide, BENT helix, HY protease; 1.30A {Mycobacterium tuberculosis} PDB: 3k6z_A 3lt3_A
Probab=99.97 E-value=1.7e-30 Score=246.85 Aligned_cols=194 Identities=24% Similarity=0.336 Sum_probs=159.2
Q ss_pred HHHHHHhCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEEEEeec
Q 013444 128 ANAAARVCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGTVLNAD 207 (443)
Q Consensus 128 ~~~~~~~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~dg~~~~a~vv~~d 207 (443)
.++++++.+|||+|....... .....||||+|+ +||||||+||+.+. ..+.|.+.+ ..+.++++..|
T Consensus 34 ~~~~~~~~~svV~I~~~~~~~---~~~~~GsG~iI~-~~~VlTaaH~v~~~--------~~~~V~~~~-~~~~~~~v~~~ 100 (237)
T 3k6y_A 34 NPVVAATEPSVVKIRSLAPRC---QKVLEGTGFVIS-PDRVMTNAHVVAGS--------NNVTVYAGD-KPFEATVVSYD 100 (237)
T ss_dssp CHHHHHHGGGEEEEEEEEGGG---TEEEEEEEEEEE-TTEEEECGGGTTTC--------SEEEEEETT-EEEECEEEEEE
T ss_pred HHHHHHhcCCEEEEEEEecCC---CcceeEEEEEEE-CCEEEECHHHcCCC--------ceEEEEECC-cEEEEEEEEEc
Confidence 568899999999999865332 123679999999 67999999999874 478899988 58899999999
Q ss_pred CCCCEEEEEEcCCCCCCccccCCCCCCCCCCEEEEEecCCCCCCceEEEEEEeeecCccCC--CCCC-ccceEEEEcccC
Q 013444 208 FHSDIAIVKINSKTPLPAAKLGTSSKLCPGDWVVAMGCPHSLQNTVTAGIVSCVDRKSSDL--GLGG-MRREYLQTDCAI 284 (443)
Q Consensus 208 ~~~DlAlLkl~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~~~~~~--~~~~-~~~~~i~~d~~i 284 (443)
+.+||||||++ ...++++.|. +..++.|+.|+++|||.+.....+.|.+.......... .... ....++++++.+
T Consensus 101 ~~~DiAll~l~-~~~~~~~~l~-~~~~~~G~~v~v~G~p~g~~~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (237)
T 3k6y_A 101 PSVDVAILAVP-HLPPPPLVFA-AEPAKTGADVVVLGYPGGGNFTATPARIREAIRLSGPDIYGDPEPVTRDVYTIRADV 178 (237)
T ss_dssp TTTTEEEEECT-TCCSCCCCBC-SSCCCTTCEEEEEECGGGCSCEEEEEEEEEEEEEEECCTTCCSSCEEEEEEEEESCC
T ss_pred CCCCEEEEEeC-CCCCCceecC-CCCCCCCCEEEEEECCCCCCCccceeEEEeeEeecccccccCCCcccccEEEecCcc
Confidence 99999999998 4568888897 57789999999999999888788888877654432211 1111 345678999999
Q ss_pred CCCCccceeeecCCCEEEEEEEEeecCCCeEEEEeHHHHHHHHHHHHHcCce
Q 013444 285 NAGNSGGPLVNIDGEIVGINIMKVAAADGLSFAVPIDSAAKIIEQFKKNGRV 336 (443)
Q Consensus 285 ~~G~SGGPlvd~~G~VVGI~s~~~~~~~g~~~aIPi~~i~~~l~~l~~~g~v 336 (443)
|+|+|||||||.+|+||||+++......+++|+||++.++++++++.....+
T Consensus 179 ~~GdSGGPLv~~~G~vvGI~s~~~~~~~~~~~aip~~~v~~~l~~~~~~~~v 230 (237)
T 3k6y_A 179 EQGDSGGPLIDLNGQVLGVVFGAAIDDAETGFVLTAGEVAGQLAKIGATQPV 230 (237)
T ss_dssp CTTCTTCEEECTTSCEEEEEEEECSSSTTEEEEEEHHHHHGGGGGTTCCSCC
T ss_pred CCCccHHHEECCCCEEEEEEEeeccCCCcEEEEEEHHHHHHHHHHccCCCCC
Confidence 9999999999999999999999877777899999999999999998654444
No 16
>2as9_A Serine protease; trypsin-like fold, hydrolase; 1.70A {Staphylococcus aureus}
Probab=99.88 E-value=5.6e-22 Score=184.62 Aligned_cols=158 Identities=19% Similarity=0.317 Sum_probs=122.3
Q ss_pred cEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEe----CCCcEEEEE-EEeecCCCCEEEEEEcCC---------
Q 013444 155 GIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTL----QDGRTFEGT-VLNADFHSDIAIVKINSK--------- 220 (443)
Q Consensus 155 ~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~----~dg~~~~a~-vv~~d~~~DlAlLkl~~~--------- 220 (443)
..||||+|++ +||||||||+.+... ...+.|.+ .+++.+.++ ++.+|+.+|||||+++.+
T Consensus 23 ~~c~G~lI~~-~~VLTaaHcv~~~~~-----~~~i~v~~~~~~~~g~~~~~~~v~~~~~~~DiAll~l~~~~~~~~~~~~ 96 (210)
T 2as9_A 23 KDATGFVIGK-NTIITNKHVSKDYKV-----GDRITAHPNGDKGNGGIYKIKSISDYPGDEDISVMNIEEQAVERGPKGF 96 (210)
T ss_dssp SSCEEEEEET-TEEEECHHHHHHCCT-----TCEEEESCCGGGCCSCEEEEEEEEECSSSSSCEEEEECSEEEEEETTEE
T ss_pred eeEEEEEEeC-CEEEECHhHCCccCC-----CCEEEEEeCcccCCCCEEEEEEEEeCCCCCcEEEEEecCcccccccccc
Confidence 5699999996 599999999976321 12566653 467888874 778888999999999862
Q ss_pred ---CCCCccccCCCCCCCCCCEEEEEecCCCCCCc----eEEEEEEeeecCccCCCCCCccceEEEEcccCCCCCcccee
Q 013444 221 ---TPLPAAKLGTSSKLCPGDWVVAMGCPHSLQNT----VTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAGNSGGPL 293 (443)
Q Consensus 221 ---~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~----~t~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPl 293 (443)
..++++.|. ..+..|+.++++|||.+.... +..|+++... ..++++++.+|+|+|||||
T Consensus 97 ~~~~~v~~i~l~--~~~~~g~~v~v~G~p~~~~~~~~l~~~~g~v~~~~------------~~~i~~~~~~~~GdSGGPl 162 (210)
T 2as9_A 97 NFNENVQAFNFA--KDAKVDDKIKVIGYPLPAQNSFKQFESTGTIKRIK------------DNILNFDAYIEPGNSGSPV 162 (210)
T ss_dssp EGGGSCCCCCBC--SCCCTTCEEEEEECSSTTTTTSCCEEEEEEEEEEE------------TTEEEEECCCCTTCTTCEE
T ss_pred ccccccceeecC--CCCCCCCEEEEEeCCCCCCCCcceEEeeeEEcccc------------CCeEEEcCccCCCCccCcE
Confidence 135677774 467899999999999865432 3667776542 2357888999999999999
Q ss_pred eecCCCEEEEEEEEeec--CCCeEEEEeHHHHHHHHHHHHH
Q 013444 294 VNIDGEIVGINIMKVAA--ADGLSFAVPIDSAAKIIEQFKK 332 (443)
Q Consensus 294 vd~~G~VVGI~s~~~~~--~~g~~~aIPi~~i~~~l~~l~~ 332 (443)
||.+|+||||++++... ....+|++|.+.|+++++..++
T Consensus 163 v~~~g~lvGI~s~g~~~~~~~~~~~~~~~~~i~~f~~~~~~ 203 (210)
T 2as9_A 163 LNSNNEVIGVVYGGIGKIGSEYNGAVYFTPQIKDFIQKHIE 203 (210)
T ss_dssp ECTTSCEEEEECCSCCCTTCSSEEEEECCHHHHHHHHTTCC
T ss_pred ECCCCeEEEEEecccccCCccccccEEEcHHHHHHHHHhhh
Confidence 99899999999998752 3557899999999999987653
No 17
>2w5e_A Putative serine protease; coiled coil, transmembrane, thiol protease, RNA replication, ribosomal frameshifting, catalytic triad, membrane; 2.00A {Human astrovirus 1}
Probab=99.87 E-value=1.7e-21 Score=173.97 Aligned_cols=135 Identities=22% Similarity=0.272 Sum_probs=100.0
Q ss_pred CcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEEEEeecCCCCEEEEEEcCCC-CCCccccCCCC
Q 013444 154 RGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINSKT-PLPAAKLGTSS 232 (443)
Q Consensus 154 ~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkl~~~~-~~~~~~l~~s~ 232 (443)
.+.||||+| +|+||||+||+.++ ..+.|.+ +++.++++++ .|+..||||||++... ++++++|+++.
T Consensus 20 ~~~GSGfii--~g~IlTn~HVV~~~--------~~i~V~~-dg~~~~a~vv-~d~~~DlAlLkv~~~~~~~~~l~l~~~~ 87 (163)
T 2w5e_A 20 EGKGTGFFS--GNDIVTAAHVVGNN--------TFVNVCY-EGLMYEAKVR-YMPEKDIAFITCPGDLHPTARLKLSKNP 87 (163)
T ss_dssp TEEEEEEEE--TTEEEEEHHHHTTC--------SEEEEEE-TTEEEEEEEE-ECCSSSEEEEECCTTCCCSCCCCBCSSC
T ss_pred ceeEEEEEE--CCEEEecHHHhCCC--------ceEEEEE-CCEEEEEEEE-EECCCCEEEEEecCCCCCcceEEcCCCC
Confidence 377999999 57999999999874 4788888 8999999999 8999999999998642 44456676543
Q ss_pred CCCCCCEEEEEecCCCCCCceEEEEEEeeecCccCCCCCCccceEEEEcccCCCCCccceeeecCCCEEEEEEEEeecCC
Q 013444 233 KLCPGDWVVAMGCPHSLQNTVTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAGNSGGPLVNIDGEIVGINIMKVAAAD 312 (443)
Q Consensus 233 ~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~ 312 (443)
..+.|+++|+|.+. + .++...... ....+..++.+++|+|||||||.+|+||||++..... .
T Consensus 88 ---~~~~v~~~G~p~~~---~---~~s~~~~~~--------~g~~~~~~a~i~pGnSGGPl~n~~G~VVGI~~~~~g~-~ 149 (163)
T 2w5e_A 88 ---DYSCVTVMAYVNED---L---VVSTAAAMV--------YGNTLSYAVRTQDGMSGAPVCDKYCRVLAVHQTNTGY-T 149 (163)
T ss_dssp ---CTTEEEEEEEETTE---E---EEEEEEEEE--------ETTEEEEECSCSSCCTTCEEECTTSCEEEEEEEEETT-E
T ss_pred ---CCCEEEEEEeCCCC---E---EEEEeccEE--------cCCeEEEEEEeCCCCchhhEEcCCCEEEEEEccCccc-c
Confidence 24899999999762 1 111111100 1124567799999999999999999999999865432 2
Q ss_pred CeEEEEe
Q 013444 313 GLSFAVP 319 (443)
Q Consensus 313 g~~~aIP 319 (443)
+ +|+|.
T Consensus 150 g-g~ai~ 155 (163)
T 2w5e_A 150 G-GAVII 155 (163)
T ss_dssp E-EEEEC
T ss_pred c-CEEEe
Confidence 3 66654
No 18
>1agj_A Epidermolytic toxin A; hydrolase, serine protease; 1.70A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dua_A 1exf_A 1due_A
Probab=99.86 E-value=7.8e-21 Score=180.54 Aligned_cols=170 Identities=23% Similarity=0.363 Sum_probs=121.8
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCCC-------------cEEE
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDG-------------RTFE 200 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~dg-------------~~~~ 200 (443)
-.+++|+|... +...|+||+|+++ ||||||||+.+... ..+.|.+.+| ..+.
T Consensus 42 p~~~~v~i~~~--------~~~~c~G~lI~~~-~VLTAaHcv~~~~~------~~~~v~~~~G~~~~~~~~~~~~~~~~~ 106 (242)
T 1agj_A 42 PYNTIGNVFVK--------GQTSATGVLIGKN-TVLTNRHIAKFANG------DPSKVSFRPSINTDDNGNTETPYGEYE 106 (242)
T ss_dssp TGGGEEEEEET--------TTEEEEEEECSSS-EEEECHHHHGGGTT------CGGGEEEEETCEECTTSCEECTTCCEE
T ss_pred ccceEEEEEEC--------CCccEEEEEEeCC-EEEEChhhcccCCC------CceEEEEecCccccccccccccCCcee
Confidence 34566777642 1267999999965 99999999976421 1122333222 3578
Q ss_pred EEEEeecC---CCCEEEEEEcCCC-------CCCccccCCCCCCCCCCEEEEEecCCCCCCc-eEEEEEEeeecCccCCC
Q 013444 201 GTVLNADF---HSDIAIVKINSKT-------PLPAAKLGTSSKLCPGDWVVAMGCPHSLQNT-VTAGIVSCVDRKSSDLG 269 (443)
Q Consensus 201 a~vv~~d~---~~DlAlLkl~~~~-------~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~-~t~G~Vs~~~~~~~~~~ 269 (443)
++.+..|+ .+|||||+++.+. .++++.|.....+..|+.++++|||.+.... +....+....
T Consensus 107 ~~~i~~~~~~~~~DiAll~l~~~~~~~~~~~~v~~i~L~~~~~~~~g~~~~v~Gwg~~~~~~~l~~~~~~~~~------- 179 (242)
T 1agj_A 107 VKEILQEPFGAGVDLALIRLKPDQNGVSLGDKISPAKIGTSNDLKDGDKLELIGYPFDHKVNQMHRSEIELTT------- 179 (242)
T ss_dssp EEEEESCTTCTTSCCEEEEECCCTTSCCHHHHSCCCEECCSTTCCTTCEEEEEECCTTTSTTCCEEEEEEECC-------
T ss_pred EEEEEeCCCCCCCcEEEEEEcCCCccccccccccceecCccccCCCCCEEEEEeCCCCCCCccceeeeeeEec-------
Confidence 88888888 8999999998763 3778888766678899999999999875432 2232222111
Q ss_pred CCCccceEEEEcccCCCCCccceeeecCCCEEEEEEEEeec---CCCeEEEEeHH-HHHHHHHH
Q 013444 270 LGGMRREYLQTDCAINAGNSGGPLVNIDGEIVGINIMKVAA---ADGLSFAVPID-SAAKIIEQ 329 (443)
Q Consensus 270 ~~~~~~~~i~~d~~i~~G~SGGPlvd~~G~VVGI~s~~~~~---~~g~~~aIPi~-~i~~~l~~ 329 (443)
....+++++.+|+|+|||||++.+|+||||++++..- ..+.++++|+. .+++++++
T Consensus 180 ----~~~~~~~~~~~c~GdSGGPl~~~~g~lvGI~s~g~~c~~~~~~~~~~~~i~~~~~~~l~~ 239 (242)
T 1agj_A 180 ----LSRGLRYYGFTVPGNSGSGIFNSNGELVGIHSSKVSHLDREHQINYGVGIGNYVKRIINE 239 (242)
T ss_dssp ----GGGSEEEECCCCGGGTTCEEECTTSEEEEEEEEEEECSSTTCEEEEEEECCHHHHHHHHH
T ss_pred ----CCceEEEeCCcCCCCCchHhcccCCEEEEEEeccccccCcCCCceeeEEehHHHHHHHHh
Confidence 1123567889999999999999899999999998752 24688999985 67777765
No 19
>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme, hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1qy6_A
Probab=99.83 E-value=3.2e-19 Score=172.78 Aligned_cols=177 Identities=22% Similarity=0.286 Sum_probs=124.4
Q ss_pred HhCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEe--------CCCcEEEEEEE
Q 013444 133 RVCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTL--------QDGRTFEGTVL 204 (443)
Q Consensus 133 ~~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~--------~dg~~~~a~vv 204 (443)
.-.+++|+|...... +.+.|+||+|+++ ||||||||+.+.... ...+.|.+ .+++....+++
T Consensus 17 ~P~~~~v~i~~~~~~-----~~~~C~G~lI~~~-~VLTAAHCv~~~~~~----~~~i~V~~G~~~~~~~~~g~~~~~~i~ 86 (274)
T 2o8l_A 17 GHYAPVTYIQVEAPT-----GTFIASGVVVGKD-TLLTNKHVVDATHGD----PHALKAFPSAINQDNYPNGGFTAEQIT 86 (274)
T ss_dssp GGGTTEEEEEEEETT-----EEEEEEEEEEETT-EEEECHHHHHTTTTC----GGGEEEEETCCBTTBCTTCCEEEEEEE
T ss_pred CCcceEEEEEEEcCC-----CCEEEEEEEEECC-EEEEChhhCcccCCC----cceEEEEecccCcccccCccEEEEEEE
Confidence 345677888754321 2267999999976 999999999764210 12366653 33444456677
Q ss_pred eecCCCCEEEEEEcCC-------CCCCccccCCCCCCCCCCEEEEEecCCCCCC---ceEEEEEEeeecCccCCCCCCcc
Q 013444 205 NADFHSDIAIVKINSK-------TPLPAAKLGTSSKLCPGDWVVAMGCPHSLQN---TVTAGIVSCVDRKSSDLGLGGMR 274 (443)
Q Consensus 205 ~~d~~~DlAlLkl~~~-------~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~---~~t~G~Vs~~~~~~~~~~~~~~~ 274 (443)
..+..+|||||||+.+ ..+.++.|.....+..|+.++++|||.+... ....|.+....
T Consensus 87 ~~~~~~DIALLkL~~~~~~~~~~~~v~pi~L~~~~~~~~g~~v~v~Gwg~~~~~~~~~~~~g~i~~~~------------ 154 (274)
T 2o8l_A 87 KYSGEGDLAIVKFSPNEQNKHIGEVVKPATMSNNAETQTNQNITVTGYPGDKPVATMWESKGKITYLK------------ 154 (274)
T ss_dssp ECSSSSCCEEEEECCCTTSCCTTTSSCCCEECCCTTCCTTCEEEEEECCTTSSTTCEEEEEEEEEEEE------------
T ss_pred eCCCCCcEEEEEecCcccccccccccccccccccccccCCCEEEEEECCCCCCCceEEecCceEEecC------------
Confidence 7778899999999865 2467888876556789999999999976432 23445554322
Q ss_pred ceEEEEcccCCCCCccceeeecCCCEEEEEEEEeecCCCeEEEEeHHHHHHHHHHHHH
Q 013444 275 REYLQTDCAINAGNSGGPLVNIDGEIVGINIMKVAAADGLSFAVPIDSAAKIIEQFKK 332 (443)
Q Consensus 275 ~~~i~~d~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~g~~~aIPi~~i~~~l~~l~~ 332 (443)
..+++.++.+|+|+||||||+.+|+||||++++.....+.++++. ..++.+|++..+
T Consensus 155 ~~~i~~~~~~c~GdSGGPLv~~~g~lvGIvS~G~~~~~~~~~~~~-~~~~~wI~~~i~ 211 (274)
T 2o8l_A 155 GEAMQYDLSTTGGNSGSPVFNEKNEVIGIHWGGVPNEFNGAVFIN-ENVRNFLKQNIE 211 (274)
T ss_dssp TTEEEESCCCCTTCTTCEEECTTSCEEEEEEEEETTTEEEEEECC-HHHHHHHHHHCT
T ss_pred CCeEEeCcccCCCCchhheeccCCeEEEEEeCcccCCCCceEEec-HHHHHHHHHHHh
Confidence 235778999999999999999899999999998653333455553 556777766543
No 20
>2w7s_A Serine protease SPLA; hydrolase, family S1; 1.80A {Staphylococcus aureus} PDB: 2w7u_A
Probab=99.83 E-value=3.6e-20 Score=170.69 Aligned_cols=156 Identities=21% Similarity=0.345 Sum_probs=110.8
Q ss_pred cEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEe----CCCcEEEE-EEEeecCCCCEEEEEEcCC--------C
Q 013444 155 GIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTL----QDGRTFEG-TVLNADFHSDIAIVKINSK--------T 221 (443)
Q Consensus 155 ~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~----~dg~~~~a-~vv~~d~~~DlAlLkl~~~--------~ 221 (443)
..|+||+|++ +||||||||+.+.... ...+.+.+ .+++.+.+ +++.+|+.+|||||+++.+ .
T Consensus 22 ~~c~G~lI~~-~~VLTaaHcv~~~~~~----~~~v~v~~~~~~~~~~~~~~~~i~~~~~~~DiAll~l~~~~~~~~~~~~ 96 (200)
T 2w7s_A 22 VGGTGVVVGK-NTIVTNKHIAKSNDIF----KNRVSAHHSSKGKGGGNYDVKDIVEYPGKEDLAIVHVHETSTEGLNFNK 96 (200)
T ss_dssp TTEEEEEEET-TEEEECHHHHHHHHHT----TCCEEETCCSSSCCCCEECEEEEEECSSSSSCEEEEECSBCTTSCBGGG
T ss_pred ceEEEEEEEC-CEEEEChhhcCCcccC----CcEEEEEecCccCCCcEEEEEEEecCCCcceEEEEEECCCCCCcccccc
Confidence 4599999996 5999999999753100 02344543 45677777 5778888999999999864 1
Q ss_pred CCCccccCCCCCCCCCCEEEEEecCCCCCC----ceEEEEEEeeecCccCCCCCCccceEEEEcccCCCCCccceeeecC
Q 013444 222 PLPAAKLGTSSKLCPGDWVVAMGCPHSLQN----TVTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAGNSGGPLVNID 297 (443)
Q Consensus 222 ~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~----~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvd~~ 297 (443)
.++++.|. ..+..|+.++++|||.+... .++.|+++... ..++++++.+|+|+|||||+|.+
T Consensus 97 ~v~pi~l~--~~~~~g~~v~v~G~p~g~~~~~~~~~~~g~v~~~~------------~~~~~~~~~~~~GdSGGPl~~~~ 162 (200)
T 2w7s_A 97 NVSYTKFA--DGAKVKDRISVIGYPKGAQTKYKMFESTGTINHIS------------GTFMEFDAYAQPGNSGSPVLNSK 162 (200)
T ss_dssp SCCCCCBC--CCCCTTCEEEEEECTTHHHHTSCEEEEEEEEEEEE------------TTEEEECSCCCTTCTTCEEECTT
T ss_pred cccceecc--ccCCCCCEEEEEECCCCCCCccceEEeEEEEEccC------------CCEEEEcceeCCCCccCeEECcC
Confidence 45666774 45788999999999975332 23566666432 23577889999999999999989
Q ss_pred CCEEEEEEEEeecC-CCeEEEE-eHHHHHHHHHH
Q 013444 298 GEIVGINIMKVAAA-DGLSFAV-PIDSAAKIIEQ 329 (443)
Q Consensus 298 G~VVGI~s~~~~~~-~g~~~aI-Pi~~i~~~l~~ 329 (443)
|+||||++++.... ...++.+ ....++++|++
T Consensus 163 g~lvGI~s~g~~~~~~~~~~~v~~~~~~~~wI~~ 196 (200)
T 2w7s_A 163 HELIGILYAGSGKDESEKNFGVYFTPQLKEFIQN 196 (200)
T ss_dssp SCEEEEEEEEC----CCCEEEEECCHHHHHHHHH
T ss_pred CEEEEEEeccccCCCCccceeeecHHHHHHHHHh
Confidence 99999999986532 2345555 44667777654
No 21
>1wcz_A Glutamyl endopeptidase; virulence factor, hydrolase; 2.00A {Staphylococcus aureus} SCOP: b.47.1.1
Probab=99.82 E-value=6.7e-19 Score=169.95 Aligned_cols=177 Identities=22% Similarity=0.283 Sum_probs=124.3
Q ss_pred HhCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEe--------CCCcEEEEEEE
Q 013444 133 RVCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTL--------QDGRTFEGTVL 204 (443)
Q Consensus 133 ~~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~--------~dg~~~~a~vv 204 (443)
--.+++|+|...... +.+.|+||+|+++ ||||||||+.+.... ...+.|.+ .+++...++++
T Consensus 17 ~P~~~~v~l~~~~~~-----g~~~CgG~lI~~~-~VLTAAHCv~~~~~~----~~~i~V~~G~~~~~~~~~g~~~~~~i~ 86 (268)
T 1wcz_A 17 GHYAPVTYIQVEAPT-----GTFIASGVVVGKD-TLLTNKHVVDATHGD----PHALKAFPSAINQDNYPNGGFTAEQIT 86 (268)
T ss_dssp GGGTTEEEEEEEC-C-----CEEEEEEEECSSS-EEEECHHHHGGGTTC----GGGEEEEETCCBTTBCTTCCEEEEEEE
T ss_pred CCccEEEEEEEEcCC-----CCEEEEEEEEECC-EEEEChhhCCCccCC----cceEEEEecccCcccccCCcEEEEEEe
Confidence 345677777653321 2367999999976 999999999763210 12466654 23444456677
Q ss_pred eecCCCCEEEEEEcCCC-------CCCccccCCCCCCCCCCEEEEEecCCCCCC---ceEEEEEEeeecCccCCCCCCcc
Q 013444 205 NADFHSDIAIVKINSKT-------PLPAAKLGTSSKLCPGDWVVAMGCPHSLQN---TVTAGIVSCVDRKSSDLGLGGMR 274 (443)
Q Consensus 205 ~~d~~~DlAlLkl~~~~-------~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~---~~t~G~Vs~~~~~~~~~~~~~~~ 274 (443)
..+..+|||||||+.+. .+.++.|.....+..|+.++++|||.+... ....+.++...
T Consensus 87 ~~~~~~DIALLkL~~~~~~~~~~~~v~pi~L~~~~~~~~g~~v~v~Gwg~~~~~~~~~~~~g~i~~~~------------ 154 (268)
T 1wcz_A 87 KYSGEGDLAIVKFSPNEQNKHIGEVVKPATMSNNAETQVNQNITVTGYPGDKPVATMWESKGKITYLK------------ 154 (268)
T ss_dssp ECSSSSCCEEEEECCCTTSCCHHHHSCCCCBCCCSSCCTTCEEEEEECCTTSSTTCEEEEEEEEEEEE------------
T ss_pred cCCCCCcEEEEEecCcccccccccccceeecccccccCCCCEEEEEECCCCCCCceEEeecceEEeeC------------
Confidence 77788999999998653 367888876556788999999999976432 23445554322
Q ss_pred ceEEEEcccCCCCCccceeeecCCCEEEEEEEEeecCCCeEEEEeHHHHHHHHHHHHH
Q 013444 275 REYLQTDCAINAGNSGGPLVNIDGEIVGINIMKVAAADGLSFAVPIDSAAKIIEQFKK 332 (443)
Q Consensus 275 ~~~i~~d~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~g~~~aIPi~~i~~~l~~l~~ 332 (443)
..+++.++.+|+|+|||||++.+|+||||++++.....+.++++. ..++.+|++..+
T Consensus 155 ~~~i~~~~~~c~GdSGGPLv~~~g~lvGIvS~G~~~~~~~~~~~~-~~~~~wI~~~i~ 211 (268)
T 1wcz_A 155 GEAMQYDLSTTGGNSGSPVFNEKNEVIGIHWGGVPNEFNGAVFIN-ENVRNFLKQNIE 211 (268)
T ss_dssp TTEEEESBCCCTTCTTCEEECTTSCEEEEEEEEETTTEEEEEECC-HHHHHHHHHHCT
T ss_pred CCeEEEecccCCCCccCeEEccCCEEEEEEeCCccCCcceeEEcC-HHHHHHHHHHHH
Confidence 236788899999999999998899999999998653334556664 567777776553
No 22
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=99.81 E-value=6.9e-21 Score=164.83 Aligned_cols=123 Identities=35% Similarity=0.564 Sum_probs=108.7
Q ss_pred CCeEEEEeHHHHHHHHHHHHHcCceeeeecCceeecccH---HHHHHhhcCCCCCCCCCCceEEeEECCCCccccCCCCC
Q 013444 312 DGLSFAVPIDSAAKIIEQFKKNGRVVRPWLGLKMLDLND---MIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAGFLP 388 (443)
Q Consensus 312 ~g~~~aIPi~~i~~~l~~l~~~g~v~rp~lGi~~~~~~~---~~~~~l~~~~~~~~~~~~g~~V~~v~~~spA~~aGl~~ 388 (443)
.|++|+||++.+++++++|+++|++.|+|||+.++++++ ..++.++... ....|++|.+|.++|||+ +||++
T Consensus 2 ~GigFAIP~~~~~~v~~~L~~~G~v~r~~LGv~~~~~~~~~~~~~~~lgl~~----~~~~g~~V~~V~~~spA~-aGL~~ 76 (134)
T 2l97_A 2 EGLGFAIPANDAINIIEQLEKNGKVTRPALGIQMVNLSNVSTSDIRRLNIPS----NVTSGVIVRSVQSNMPAN-GHLEK 76 (134)
T ss_dssp CCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCEEEESSSSCHHHHHHHSSCS----SSCSCEEEEECSTTSGGG-TTSCS
T ss_pred CcEEEEeEHHHHHHHHHHHHHcCCEeeeEeeEEEEECCchhHHHHHHcCCCc----CCCCCEEEEEECCCCchH-HCCCC
Confidence 578999999999999999999999999999999998865 6677776531 135799999999999999 99999
Q ss_pred CCEEEEECCEeeCCHHHHHHHHhc-CCCCeEEEEEEECCCeEEEEEEEecCCC
Q 013444 389 SDVVIKFDGKPVQSITEIIEIMGD-RVGEPLKVVVQRANDQLVTLTVIPEEAN 440 (443)
Q Consensus 389 GDiI~~vng~~V~s~~dl~~~l~~-~~g~~v~l~v~R~~g~~~~l~v~~~~~~ 440 (443)
||+|++|||++|.++.++..++.. ..|++++|+|.| +|+.+++++++.+.+
T Consensus 77 GD~I~~inG~~v~~~~~l~~~l~~~~~g~~v~l~v~R-~g~~~~~~v~~~~~~ 128 (134)
T 2l97_A 77 YDVITKVDDKEIASSTDLQSALYNHSIGDTIKITYYR-NGKEETTSIKLNKLE 128 (134)
T ss_dssp SCEEEEETTEECCCHHHHHHHHHHSSTTCEEEEEEEE-TTEEEEEEEECCCC-
T ss_pred CCEEEEECCEEcCCHHHHHHHHHhCCCCCEEEEEEEE-CCEEEEEEEEEcccC
Confidence 999999999999999999998876 479999999999 899999999988754
No 23
>2vid_A Serine protease SPLB; hydrolase; 1.80A {Staphylococcus aureus}
Probab=99.80 E-value=8.7e-19 Score=161.49 Aligned_cols=156 Identities=21% Similarity=0.387 Sum_probs=111.0
Q ss_pred cEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEe----CCCcEEE-EEEEeecCCCCEEEEEEcCCC--------
Q 013444 155 GIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTL----QDGRTFE-GTVLNADFHSDIAIVKINSKT-------- 221 (443)
Q Consensus 155 ~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~----~dg~~~~-a~vv~~d~~~DlAlLkl~~~~-------- 221 (443)
+.|+||+|+++ ||||||||+.+... ...+.+.. .++..+. .+++..+..+|||||+++.+.
T Consensus 22 ~~c~G~lI~~~-~VLTaaHcv~~~~~-----~~~v~v~~~~~~~~~~~~~~~~i~~~~~~~DiAll~l~~~~~~~~~~~~ 95 (204)
T 2vid_A 22 KSATGFVVGKN-TILTNKHVSKNYKV-----GDRITAHPNSDKGNGGIYSIKKIINYPGKEDVSVIQVEERAIERGPKGF 95 (204)
T ss_dssp SSCEEEEEETT-EEEECHHHHTTCCT-----TCEEEESCCSSSCCSCEEEEEEEEECSSSSCCEEEEECSEEEEEETTEE
T ss_pred eeEEEEEEECC-EEEEChhHCCCccC-----CceEEEEeccccCCCcEEEeeEEecCCCCCeEEEEEEcCcccccccccc
Confidence 35999999987 99999999976421 12444421 3456676 566777788999999998531
Q ss_pred ----CCCccccCCCCCCCCCCEEEEEecCCCCCC----ceEEEEEEeeecCccCCCCCCccceEEEEcccCCCCCcccee
Q 013444 222 ----PLPAAKLGTSSKLCPGDWVVAMGCPHSLQN----TVTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAGNSGGPL 293 (443)
Q Consensus 222 ----~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~----~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPl 293 (443)
.+.++.|.. .+..|+.++++|||.+... ....|.++... ...++.++.+|+|+|||||
T Consensus 96 ~~~~~v~pi~l~~--~~~~g~~~~~~G~g~~~~~~~~~~~~~g~v~~~~------------~~~~~~~~~~~~GdSGGPl 161 (204)
T 2vid_A 96 NFNDNVTPFKYAA--GAKAGERIKVIGYPHPYKNKYVLYESTGPVMSVE------------GSSIVYSAHTESGNSGSPV 161 (204)
T ss_dssp EHHHHCCCCCBCS--CCCTTCEEEEEECCCCCC--CCCEEEEEEEEEEE------------TTEEEECCCCCGGGTTCEE
T ss_pred cccccccccccCC--cCCCCCEEEEEeCCCCCCCCcceEeeccEEeecc------------CCeEEEecccCCCCccCcE
Confidence 246667743 5788999999999986443 34456665432 2357788999999999999
Q ss_pred eecCCCEEEEEEEEee--cCCCeEEEE-eHHHHHHHHHHH
Q 013444 294 VNIDGEIVGINIMKVA--AADGLSFAV-PIDSAAKIIEQF 330 (443)
Q Consensus 294 vd~~G~VVGI~s~~~~--~~~g~~~aI-Pi~~i~~~l~~l 330 (443)
++.+|+||||++++.. .....+|.+ +...++++|++.
T Consensus 162 ~~~~g~lvGI~s~g~~~~~~~~~~~~~~~~~~~~~wI~~~ 201 (204)
T 2vid_A 162 LNSNNELVGIHFASDVKNDDNRNAYGVYFTPEIKKFIAEN 201 (204)
T ss_dssp ECTTSCEEEEEEEECC---CCCCEEEECCCHHHHHHHHHH
T ss_pred ECCCCeEEEEEecCccCCCcccccceeEeCHHHHHHHHhh
Confidence 9989999999999864 233455554 346677777654
No 24
>2h5c_A Alpha-lytic protease; serine protease, acylation transition STAT catalysis, protein folding, protein stability, packing DIST hydrolase; HET: SO4; 0.82A {Lysobacter enzymogenes} SCOP: b.47.1.1 PDB: 1p02_A 1p03_A 1p04_A 1p05_A 1p06_A* 1p01_A 1p11_E 1p12_E 1qrx_A* 1tal_A 2alp_A 1ssx_A* 2h5d_A* 2ull_A 3qgj_A* 9lpr_A 1boq_A 1gbj_A 1gbk_A 1gbl_A ...
Probab=99.79 E-value=1.6e-18 Score=159.71 Aligned_cols=154 Identities=18% Similarity=0.190 Sum_probs=118.2
Q ss_pred EEEEEEEeCC--CEEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEEEEeec-CCCCEEEEEEcCCCC-CCcc-----
Q 013444 156 IGSGAIVDAD--GTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGTVLNAD-FHSDIAIVKINSKTP-LPAA----- 226 (443)
Q Consensus 156 ~GSGfiI~~~--G~ILTaaHvv~~~~~~~~~~~~~i~V~~~dg~~~~a~vv~~d-~~~DlAlLkl~~~~~-~~~~----- 226 (443)
..+||++.++ ++||||+||+... ..+. .+ ..+.++++..| +..|+||||++.+.. .+.+
T Consensus 17 CT~Gf~v~~~~~~~ilTa~Hc~~~~--------~~v~---~~-~~~~g~vv~~~~~~~D~Avi~i~~~~~~~~~v~~~g~ 84 (198)
T 2h5c_A 17 CSVGFSVTRGATKGFVTAGHCGTVN--------ATAR---IG-GAVVGTFAARVFPGNDRAWVSLTSAQTLLPRVANGSS 84 (198)
T ss_dssp EECCEEEEETTEEEEEECGGGCCTT--------CEEE---ET-TEEEEEEEEEECSBSCEEEEEECTTSEEEEEEEETTE
T ss_pred CCcCEEEecCCeeEEEECcccCCCC--------CEEE---eC-CcEEEEEEecCCCCCCEEEEEeCCCCccCceEecCCc
Confidence 4579999753 5999999999863 3443 44 48889999999 999999999986422 1222
Q ss_pred --ccCCCCCCCCCCEEEEEecCCCCCCceEEEEEEeeecCccCCCCCCccceEEEEcccCCCCCccceeeecCCCEEEEE
Q 013444 227 --KLGTSSKLCPGDWVVAMGCPHSLQNTVTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAGNSGGPLVNIDGEIVGIN 304 (443)
Q Consensus 227 --~l~~s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvd~~G~VVGI~ 304 (443)
.+.....+++|++|+.+|.|.+ .++|+|+.+.+... +.. .....+++++..+.+|||||||+|.+|++|||+
T Consensus 85 ~~~v~g~~~~~vG~~V~~~G~~tg----~t~G~V~~~~~~~~-~~~-g~~~~~i~t~~~~~~GDSGGPl~~~~g~~vGI~ 158 (198)
T 2h5c_A 85 FVTVRGSTEAAVGAAVCRSGRTTG----YQCGTITAKNVTAN-YAE-GAVRGLTQGNACMGRGDSGGSWITSAGQAQGVM 158 (198)
T ss_dssp EEECCBCCCCCTTCEEEEEETTTE----EEEEEEEEEEEEEE-ETT-EEEEEEEEECSCCBTTCTTCEEECTTCBEEEEE
T ss_pred eEEecCcccCCCCCeEEEeecCcc----eEEEEEEeeeeEEE-eCC-CeEeeeEEecccCCCCcceeEEEeeCCEEEEEE
Confidence 3445678899999999999876 78999998877532 111 123568999999999999999999999999999
Q ss_pred EEEe-----e-----cCCCeEEEEeHHHHHHHH
Q 013444 305 IMKV-----A-----AADGLSFAVPIDSAAKII 327 (443)
Q Consensus 305 s~~~-----~-----~~~g~~~aIPi~~i~~~l 327 (443)
+++. . ...++.|++|++.+++.+
T Consensus 159 s~~~~~~~~~~c~~~~~~g~~f~~Pi~~vl~~~ 191 (198)
T 2h5c_A 159 SGGNVQSNGNNCGIPASQRSSLFERLQPILSQY 191 (198)
T ss_dssp EEECCCTTSBSTTSCGGGCCEEEEEHHHHHHHH
T ss_pred EeecCccCCCccccccCCceEEEEEHHHHHHHC
Confidence 9974 2 123689999998877654
No 25
>1qtf_A Exfoliative toxin B; serine protease, superantigen, hydrolase; 2.40A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dt2_A
Probab=99.76 E-value=5.5e-18 Score=161.43 Aligned_cols=135 Identities=21% Similarity=0.307 Sum_probs=98.9
Q ss_pred cEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC------------CcEEEEEEEeecC---CCCEEEEEEcC
Q 013444 155 GIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD------------GRTFEGTVLNADF---HSDIAIVKINS 219 (443)
Q Consensus 155 ~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d------------g~~~~a~vv~~d~---~~DlAlLkl~~ 219 (443)
+.|+||+|+++ ||||||||+.+.... ...+.+.... ...+.++.+..|+ .+|||||+++.
T Consensus 48 ~~c~G~lI~~~-~VLTAaHcv~~~~~~----~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~i~~hp~~~~~DiALLkl~~ 122 (246)
T 1qtf_A 48 TLATGVLIGKN-TIVTNYHVAREAAKN----PSNIIFTPAQNRDAEKNEFPTPYGKFEAEEIKESPYGQGLDLAIIKLKP 122 (246)
T ss_dssp EEEEEEEEETT-EEEECHHHHGGGTTC----GGGEEEEETCCCCTTTTCCCCTTCCEEEEEEESCTTCTTSCCEEEEECC
T ss_pred ceEEEEEEECC-EEEECHHhCCCCCCC----ceEEEEecCccccccccccccCCceEEEEEEEeCCCCCCCCEEEEEEeC
Confidence 67999999975 999999999763210 1245554431 1478889899888 89999999987
Q ss_pred CC-------CCCccccCCCCCCCCCCEEEEEecCCCCCCc-eEEEEEEeeecCccCCCCCCccceEEEEcccCCCCCccc
Q 013444 220 KT-------PLPAAKLGTSSKLCPGDWVVAMGCPHSLQNT-VTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAGNSGG 291 (443)
Q Consensus 220 ~~-------~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~-~t~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGG 291 (443)
+. .++++.|.....+..|+.++++|||.+.... .....+.... .+++++.+|+|+|||
T Consensus 123 ~~~~~~~~~~v~~i~L~~~~~~~~g~~v~v~G~p~g~~~~~~~~~~~~~~~--------------~~~~~~~~~~GdSGG 188 (246)
T 1qtf_A 123 NEKGESAGDLIQPANIPDHIDIAKGDKYSLLGYPYNYSAYSLYQSQIEMFN--------------DSQYFGYTEVGNSGS 188 (246)
T ss_dssp CTTSCCHHHHSCCCCCCSSCCCCTTCEEEEEECCTTTSTTCCEEEEEEESS--------------SSBEESCCCGGGTTC
T ss_pred CccccccccceeeeecCCccccCCCCEEEEEECCCCCCCceeEeeeeeecC--------------cEEEeCCCCCCCchh
Confidence 64 3778888766677899999999999875532 1111111100 123456789999999
Q ss_pred eeeecCCCEEEEEEEEe
Q 013444 292 PLVNIDGEIVGINIMKV 308 (443)
Q Consensus 292 Plvd~~G~VVGI~s~~~ 308 (443)
||||.+|+||||++++.
T Consensus 189 Plv~~~g~lvGI~s~g~ 205 (246)
T 1qtf_A 189 GIFNLKGELIGIHSGKG 205 (246)
T ss_dssp EEECTTCCEEEEEEEEE
T ss_pred heECCCCEEEEEEeccc
Confidence 99998999999999875
No 26
>2qa9_E Streptogrisin-B; chymotrypsin-type serine peptidase, second tetrahedral inter tetrapeptide, beta barrels, alpha helix, hydrolase; HET: GOL; 1.18A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sge_E 1sgn_E 1sgy_E 1sgd_E 2nu0_E 2nu1_E 2gkv_E 2nu3_E 2nu4_E 2nu2_E* 2qaa_A* 2sgd_E 2sge_E 2sgf_E 2sgp_E 2sgq_E 3sgq_E 1sgp_E 1cso_E 1ct0_E ...
Probab=99.75 E-value=1.5e-17 Score=151.37 Aligned_cols=159 Identities=20% Similarity=0.278 Sum_probs=111.4
Q ss_pred cEEE-EEEEeCC--CEEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEEEEeec-CCCCEEEEEEcC-CCC----CCc
Q 013444 155 GIGS-GAIVDAD--GTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGTVLNAD-FHSDIAIVKINS-KTP----LPA 225 (443)
Q Consensus 155 ~~GS-GfiI~~~--G~ILTaaHvv~~~~~~~~~~~~~i~V~~~dg~~~~a~vv~~d-~~~DlAlLkl~~-~~~----~~~ 225 (443)
..|| ||++..+ +|||||+||+.+. ..+.+...++..+ +++...+ +.+||||||++. +.. +++
T Consensus 12 ~~ct~Gf~v~~~~~~~ilTaaHcv~~~--------~~~~v~~~~~~~~-g~~~~~~~~~~DiAll~l~~~~~~~~~~v~~ 82 (185)
T 2qa9_E 12 GRCSLGFNVRSGSTYYFLTAGHCTDGA--------TTWWANSARTTVL-GTTSGSSFPNNDYGIVRYTNTTIPKDGTVGG 82 (185)
T ss_dssp CEEECCEEEEETTEEEEEECHHHHTTC--------SEEESSTTSCSEE-EEEEEEECSBSCEEEEEECCSSSCCCCEETT
T ss_pred CcEeccEEEEECCceEEEECcccCCCC--------CcEEecCCCceEe-EEEeccccCCCCEEEEEecCCCccccCccce
Confidence 4577 9999753 5999999999874 3455544443443 4556666 889999999986 322 245
Q ss_pred cccCCCCCCCCCCEEEEEecCCCCCCceEEEEEEeeecCccCCCCCCccceEEEEcccCCCCCccceeeecCCCEEEEEE
Q 013444 226 AKLGTSSKLCPGDWVVAMGCPHSLQNTVTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAGNSGGPLVNIDGEIVGINI 305 (443)
Q Consensus 226 ~~l~~s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvd~~G~VVGI~s 305 (443)
+.+.....+..|+.++++||+.+ .+.+.+..+..... +........+++.+...|+|||||||++.+ +++||++
T Consensus 83 ~~l~~~~~~~~g~~v~~~Gw~~~----~~~g~l~~~~~~v~-~~~~~~~~~~~~~~~cac~GDSGGPlv~~~-~~vGI~s 156 (185)
T 2qa9_E 83 QDITSAANATVGMAVTRRGSTTG----THSGSVTALNATVN-YGGGDVVYGMIRTNVCAEPGDSGGPLYSGT-RAIGLTS 156 (185)
T ss_dssp EECCEECCCCTTCEEEEEETTTE----EEEEEEEEEEEEEE-CSTTCEEEEEEEESCCCCTTCTTCEEEETT-EEEEEEE
T ss_pred eeeCCcccCCCCCEEEEecCCCc----eeEeEEEEEEEEEE-cCCCCEEeceEEecccCCCCCccceEEECC-EEEEEEE
Confidence 56654456788999999999754 56777776654421 111111234567777889999999999864 9999999
Q ss_pred EEeecC--CCeEEEEeHHHHHHHHH
Q 013444 306 MKVAAA--DGLSFAVPIDSAAKIIE 328 (443)
Q Consensus 306 ~~~~~~--~g~~~aIPi~~i~~~l~ 328 (443)
++.... ...+++.|++.++++++
T Consensus 157 ~g~~~~~~~~p~vyt~v~~~~~wI~ 181 (185)
T 2qa9_E 157 GGSGNCSSGGTTFFQPVTEALSAYG 181 (185)
T ss_dssp EEEEETTTEEEEEEEEHHHHHHHHT
T ss_pred ecCCCCCCCCcEEEEEHHHHHHhhC
Confidence 976422 24688999998887764
No 27
>1hpg_A Glutamic acid specific protease; serine protease, hydrolase-hydrolase inhibitor complex; 1.50A {Streptomyces griseus} SCOP: b.47.1.1
Probab=99.74 E-value=5.6e-17 Score=148.14 Aligned_cols=155 Identities=19% Similarity=0.242 Sum_probs=113.1
Q ss_pred EEE-EEEEeCCC--EEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEEEEeec-CCCCEEEEEEcCCCCC-Cccc---
Q 013444 156 IGS-GAIVDADG--TILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGTVLNAD-FHSDIAIVKINSKTPL-PAAK--- 227 (443)
Q Consensus 156 ~GS-GfiI~~~G--~ILTaaHvv~~~~~~~~~~~~~i~V~~~dg~~~~a~vv~~d-~~~DlAlLkl~~~~~~-~~~~--- 227 (443)
.|| ||++.++| |||||+||+.+. .. +...++....+++...+ +..|+||||++.+... +.+.
T Consensus 13 ~CT~Gfiv~~~g~~~ilT~~Hv~~~~--------~~--v~~~~~~~~~g~~~~~~~~~~DiAlikl~~~~~~~~~v~~~~ 82 (187)
T 1hpg_A 13 RCSAAFNVTKGGARYFVTAGHCTNIS--------AN--WSASSGGSVVGVREGTSFPTNDYGIVRYTDGSSPAGTVDLYN 82 (187)
T ss_dssp EEECCEEEEETTEEEEEECHHHHTTC--------SE--EESSTTCCEEEEEEEEECSBSCEEEEEECSSCCCCSEEECSS
T ss_pred cCcceEEEEECCeeEEEECcccCCCC--------Ce--EEeCCCceeEEEEeCccCCCCCEEEEEeCCCCCcCceEEecC
Confidence 354 99998764 999999999864 23 34455544446666555 7789999999864332 2222
Q ss_pred -----cCCCCCCCCCCEEEEEecCCCCCCceEEEEEEeeecCccCCCCCCccceEEEEcccCCCCCccceeeecCCCEEE
Q 013444 228 -----LGTSSKLCPGDWVVAMGCPHSLQNTVTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAGNSGGPLVNIDGEIVG 302 (443)
Q Consensus 228 -----l~~s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvd~~G~VVG 302 (443)
+..+..+++|+.|+.+|++.+ .+.|+|+.+++... +. ......+++++..+++|||||||++. ++++|
T Consensus 83 g~~~~i~~~~~~~~G~~v~~~G~~~g----~t~G~v~~~~~~v~-~~-~~~~~~~i~t~~~~~~GdSGgpl~~~-~~~vG 155 (187)
T 1hpg_A 83 GSTQDISSAANAVVGQAIKKSGSTTK----VTSGTVTAVNVTVN-YG-DGPVYNMVRTTACSAGGDSGGAHFAG-SVALG 155 (187)
T ss_dssp SCEEECCEECCCCTTCEEEEEETTTE----EEEEEEEEEEEEEE-ET-TEEEEEEEEECCCCCTTCTTCEEEET-TEEEE
T ss_pred CceeeeccccCCCCCCEEEEEEcCCC----EeEEEEEEeEEEEE-eC-CCeEeeeEEeccccCCCCCCCeEEEC-CEEEE
Confidence 334567899999999999975 68899998876542 11 12245688999999999999999986 59999
Q ss_pred EEEEEeec--CCCeEEEEeHHHHHHHH
Q 013444 303 INIMKVAA--ADGLSFAVPIDSAAKII 327 (443)
Q Consensus 303 I~s~~~~~--~~g~~~aIPi~~i~~~l 327 (443)
|++++... ..+.+|++|++.+++.+
T Consensus 156 i~s~~~~~~~~~~~~~~~~i~~~~~~l 182 (187)
T 1hpg_A 156 IHSGSSGCSGTAGSAIHQPVTEALSAY 182 (187)
T ss_dssp EEEEESCCBTTBCCCEEEEHHHHHHHH
T ss_pred EEEeeCCCCCCCCceEEEEHHHHHHHc
Confidence 99987532 23578999998776654
No 28
>2oua_A Serine protease, protein NAPA; kinetic stability, acid stability, electros hydrolase; HET: 2AB; 1.85A {Nocardiopsis alba}
Probab=99.72 E-value=7e-17 Score=147.60 Aligned_cols=152 Identities=18% Similarity=0.209 Sum_probs=114.5
Q ss_pred cEEEEEEEeC-CC--EEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEEEEeec-CCCCEEEEEEcCCCCC-Cc----
Q 013444 155 GIGSGAIVDA-DG--TILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGTVLNAD-FHSDIAIVKINSKTPL-PA---- 225 (443)
Q Consensus 155 ~~GSGfiI~~-~G--~ILTaaHvv~~~~~~~~~~~~~i~V~~~dg~~~~a~vv~~d-~~~DlAlLkl~~~~~~-~~---- 225 (443)
...+||++.+ +| +||||+||+.+. ..+ ...| +.++++..| +..|+||||++.+... +.
T Consensus 14 ~CTsGf~v~~~~G~~~ilTa~Hc~~~g--------~~v--~~~d---~~g~v~~~~~p~~DiAlikl~~~~~~~~~v~~~ 80 (188)
T 2oua_A 14 RCSVGFAATNASGQPGFVTAGHCGSVG--------TQV--SIGN---GRGVFERSVFPGNDAAFVRGTSNFTLTNLVSRY 80 (188)
T ss_dssp EEECCEEEECTTCCEEEEECGGGCCTT--------CEE--EETT---EEEEEEEEECSBSCEEEEEEEESCEEEEEEECG
T ss_pred cEecCEEEEeCCCCEEEEECcccCCCC--------CEE--EecC---ceEEEEeeCCCCCCEEEEEeCCCCccccceeec
Confidence 4468999964 78 999999999652 233 3455 889999999 9999999999864321 11
Q ss_pred -----cccCCCCCCCCCCEEEEEecCCCCCCceEEEEEEeeecCccCCCCCCccceEEEEcccCCCCCccceeeecCCCE
Q 013444 226 -----AKLGTSSKLCPGDWVVAMGCPHSLQNTVTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAGNSGGPLVNIDGEI 300 (443)
Q Consensus 226 -----~~l~~s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvd~~G~V 300 (443)
+++..+..+++|++|+.+|++.+ .+.|+|+.+++... +.. .....+++++..+.+|+|||||++ +|++
T Consensus 81 g~~~~~~l~~~~~~~vG~~v~~~G~~tG----~t~G~v~~~~~~v~-~~~-~~~~~~~~~~~~~~~GDSGgpl~~-~~~~ 153 (188)
T 2oua_A 81 NSGGYATVSGSSTAPIGSQVCRSGSTTG----WYCGTIQARNQTVS-YPQ-GTVHSLTRTSVCAEPGDSGGSFIS-GTQA 153 (188)
T ss_dssp GGCSEEECCBCCCCCTTCEEEEEETTTE----EEEEEEEEEEEEEE-ETT-EEEEEEEEESCCCCTTCTTCEEEE-TTEE
T ss_pred CCcceEeccCccCCCCCCeEEEEEcCCC----eEEEEEEEEeeEEE-eCC-CcEeeeEeeeeecCCCCccceEEE-CCEE
Confidence 24666678899999999999876 68899998876542 111 123456788888889999999994 8899
Q ss_pred EEEEEEEee--cCCCeEEEEeHHHHHHH
Q 013444 301 VGINIMKVA--AADGLSFAVPIDSAAKI 326 (443)
Q Consensus 301 VGI~s~~~~--~~~g~~~aIPi~~i~~~ 326 (443)
+||++++.. ...+.+|++|++.+++.
T Consensus 154 vGi~s~~~~~~~~~~~~~~~pi~~~l~~ 181 (188)
T 2oua_A 154 QGVTSGGSGNCRTGGTTFYQEVNPMLNS 181 (188)
T ss_dssp EEEEEEEEEETTTEEEEEEEESHHHHHH
T ss_pred EEEEeccCCCCCCCCceEEEEHHHHHHH
Confidence 999999764 22357899998877654
No 29
>2ea3_A Chymotrypsin; celloulomonas, protease, hydrolase; 1.78A {Cellulomonas bogoriensis}
Probab=99.66 E-value=1.3e-15 Score=139.11 Aligned_cols=147 Identities=18% Similarity=0.270 Sum_probs=108.9
Q ss_pred EEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEEEEeec-CCCCEEEEEEcCCCCC-C--------cc
Q 013444 157 GSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGTVLNAD-FHSDIAIVKINSKTPL-P--------AA 226 (443)
Q Consensus 157 GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~dg~~~~a~vv~~d-~~~DlAlLkl~~~~~~-~--------~~ 226 (443)
-+||++.. +||||+||+.+. .. ++..| +++++.| +..|+||||++.+..+ + ++
T Consensus 18 T~Gf~~~~--~ilTa~Hc~~~~--------~~--v~~~d-----g~v~~~~~~~~DiAlikl~~~~~~~~~v~~~~g~~v 80 (189)
T 2ea3_A 18 SIGFAVNG--GFITAGHCGRTG--------AT--TANPT-----GTFAGSSFPGNDYAFVRTGAGVNLLAQVNNYSGGRV 80 (189)
T ss_dssp ECCEEETT--EEEECGGGCCTT--------CE--EETTT-----EEEEEEECSBSCEEEEEECTTCEEEEEEECSSSCEE
T ss_pred ccCEEccC--eEEEchhcCCCC--------CE--EEeCC-----cEEEeeCCCCCCEEEEEECCCCccccceEecCCcee
Confidence 46798863 999999999763 23 34444 7788888 8999999999864221 1 23
Q ss_pred ccCCCCCCCCCCEEEEEecCCCCCCceEEEEEEeeecCccCCCCCCccceEEEEcccCCCCCccceeeecCCCEEEEEEE
Q 013444 227 KLGTSSKLCPGDWVVAMGCPHSLQNTVTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAGNSGGPLVNIDGEIVGINIM 306 (443)
Q Consensus 227 ~l~~s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvd~~G~VVGI~s~ 306 (443)
.+..+..+++|+.|+.+|++.+ .+.|+|+.+++... +.. .....+++++..+.+|||||||++ +|+++||+++
T Consensus 81 ~l~~s~~~~vG~~v~~~G~~tG----~t~G~Vs~~~~~v~-~~~-~~~~~~~~~~~~~~~GDSGgpl~~-~~~~vGi~s~ 153 (189)
T 2ea3_A 81 QVAGHTAAPVGSAVCRSGSTTG----WHCGTITALNSSVT-YPE-GTVRGLIRTTVCAEPGDSGGSLLA-GNQAQGVTSG 153 (189)
T ss_dssp ECCBCCCCCTTCEEEEEETTTE----EEEEEEEEEEEEEE-ETT-EEEEEEEEESCCCCTTCTTCEEEE-TTEEEEEEEE
T ss_pred ecCCCcCCCCCCEEEEEEeCCc----cEEEEEEecceEEE-eCC-ccCcceEEeeeeccCCCccCeEEE-CCEEEEEEee
Confidence 4666677899999999999876 67899988776542 111 112347788888899999999996 7999999998
Q ss_pred Eeec--CCCeEEEEeHHHHHHHH
Q 013444 307 KVAA--ADGLSFAVPIDSAAKII 327 (443)
Q Consensus 307 ~~~~--~~g~~~aIPi~~i~~~l 327 (443)
+... ..+.+|++|++.+++.+
T Consensus 154 ~~~~c~~~~~~~~~pi~~~l~~~ 176 (189)
T 2ea3_A 154 GSGNCRTGGTTFFQPVNPILQAY 176 (189)
T ss_dssp EEEETTTEEEEEEEEHHHHHHHH
T ss_pred cCCCCCCCCcEEEEEHHHHHHHC
Confidence 7642 23588999988766543
No 30
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=99.66 E-value=4.4e-16 Score=130.28 Aligned_cols=103 Identities=39% Similarity=0.655 Sum_probs=88.4
Q ss_pred CceeeeecCceeecccHHHHHHhhcCCCCCCCCCCceEEeEECCCCccccCCCCCCCEEEEECCEeeCCHHHHHHHHhcC
Q 013444 334 GRVVRPWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEIIEIMGDR 413 (443)
Q Consensus 334 g~v~rp~lGi~~~~~~~~~~~~l~~~~~~~~~~~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s~~dl~~~l~~~ 413 (443)
|++.|||||+.+.++++..+++++.....|+....|++|.+|.++|||+++||++||+|++|||+++.++.++..++..
T Consensus 1 G~v~r~~lGi~~~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~~- 79 (113)
T 2pzd_A 1 GSHMRRYIGVMMLTLSPSILAELQLREPSFPDVQHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNAEDVYEAVRT- 79 (113)
T ss_dssp ----CEECCEEEEECCHHHHHHHHHHCSSCCCCSSCEEEEEEBTTSHHHHHTCCTTCEEEEETTEECCSHHHHHHHHHH-
T ss_pred CcccccEeEEEEEeCCHHHHHHhccccccccCCCCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCHHHHHHHHhC-
Confidence 5678999999999999999999987554555556899999999999999999999999999999999999999998876
Q ss_pred CCCeEEEEEEECCCeEEEEEEEecCC
Q 013444 414 VGEPLKVVVQRANDQLVTLTVIPEEA 439 (443)
Q Consensus 414 ~g~~v~l~v~R~~g~~~~l~v~~~~~ 439 (443)
++++.|+|.| +++..++++++.+.
T Consensus 80 -~~~v~l~v~R-~g~~~~~~v~~~~~ 103 (113)
T 2pzd_A 80 -QSQLAVQIRR-GRETLTLYVTPEVT 103 (113)
T ss_dssp -CSSEEEEEEE-TTEEEEEEECCEEC
T ss_pred -CCeEEEEEEE-CCEEEEEEEEEeec
Confidence 6789999999 88888888887653
No 31
>2sga_A Proteinase A; hydrolase (serine proteinase); 1.50A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sgc_A 3sga_E* 4sga_E 5sga_E 2sfa_A
Probab=99.65 E-value=6.3e-16 Score=140.21 Aligned_cols=151 Identities=19% Similarity=0.246 Sum_probs=101.3
Q ss_pred cEEE-EEEEeCC--CEEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEEEEeecCCCCEEEEEEcCCCCCC-cc----
Q 013444 155 GIGS-GAIVDAD--GTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINSKTPLP-AA---- 226 (443)
Q Consensus 155 ~~GS-GfiI~~~--G~ILTaaHvv~~~~~~~~~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkl~~~~~~~-~~---- 226 (443)
..|| ||+|.++ +|||||+||+.+. ..+.+-..+ ....+..||||||++.+..++ .+
T Consensus 12 ~~ct~G~~v~~~~~~~vlTaaHc~~~~--------~~~~~G~~~--------~~~~~~~DiAlikl~~~~~~~~~v~~i~ 75 (181)
T 2sga_A 12 SRCSLGFNVSVNGVAHALTAGHCTNIS--------ASWSIGTRT--------GTSFPNNDYGIIRHSNPAAADGRVYLYN 75 (181)
T ss_dssp EEEECCEEEEETTEEEEEECHHHHTTC--------SEETTEEEE--------EEECSBSCEEEEEESCGGGCCCEEECSS
T ss_pred CcEeccEEEEECCceEEEECcccCCCC--------Cceeeccee--------CCcCCCCCEEEEEccCCCcccceEEecC
Confidence 4577 9999853 4999999999753 122111111 122367899999998642222 12
Q ss_pred ----ccCCCCCCCCCCEEEEEecCCCCCCceEEEEEEeeecCccCCCCCCccceEEEEcccCCCCCccceeeecCCCEEE
Q 013444 227 ----KLGTSSKLCPGDWVVAMGCPHSLQNTVTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAGNSGGPLVNIDGEIVG 302 (443)
Q Consensus 227 ----~l~~s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvd~~G~VVG 302 (443)
.+.....++.|+.|+++|++.+ .+.|.++....... ..........++++...++|||||||++.+ +++|
T Consensus 76 ~~~~~~~~~~~~~~G~~v~~~G~~~~----~t~G~v~~~~~~v~-~~~~~~~~~~i~~~~c~~~GDSGGPlv~~~-~~vG 149 (181)
T 2sga_A 76 GSYQDITTAGNAFVGQAVQRSGSTTG----LRSGSVTGLNATVN-YGSSGIVYGMIQTNVCAQPGDSGGSLFAGS-TALG 149 (181)
T ss_dssp SCEEECCEECCCCTTCEEEEEETTTE----EEEEEEEEEEEEEE-CGGGCEEEEEEEESCCCCTTCTTCEEEETT-EEEE
T ss_pred CcceeecccccCCCCCEEEEeecCCC----ccEEEEEEeEEEEE-CCCCCEEeeeEecccccCCCCCCCEEEECC-EEEE
Confidence 2223456789999999999865 46788877665431 111111234577788889999999999865 9999
Q ss_pred EEEEEeecC--CCeEEEEeHHHHHHHH
Q 013444 303 INIMKVAAA--DGLSFAVPIDSAAKII 327 (443)
Q Consensus 303 I~s~~~~~~--~g~~~aIPi~~i~~~l 327 (443)
|++++.... .+.+++.|++.+++.+
T Consensus 150 I~s~g~~~~~~~~~~v~~~v~~~~~~l 176 (181)
T 2sga_A 150 LTSGGSGNCRTGGTTFYQPVTEALSAY 176 (181)
T ss_dssp EEEEEEEETTTEEEEEEEEHHHHHHHH
T ss_pred EEEeeCCCCcCCCceEEEEHHHHHHhc
Confidence 999986422 2578999998877665
No 32
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=99.65 E-value=6e-16 Score=129.30 Aligned_cols=103 Identities=28% Similarity=0.614 Sum_probs=89.4
Q ss_pred CceeeeecCceeecccHHHHHHhhcCCCCCCCCCCceEEeEECCCCccccCCCCCCCEEEEECCEeeCCHHHHHHHHhcC
Q 013444 334 GRVVRPWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEIIEIMGDR 413 (443)
Q Consensus 334 g~v~rp~lGi~~~~~~~~~~~~l~~~~~~~~~~~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s~~dl~~~l~~~ 413 (443)
|++.|+|||+.+.++++..+.+++.....++....|++|..|.++|||+++||++||+|++|||+++.++.++..++.
T Consensus 1 G~v~~~~lGi~~~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~-- 78 (112)
T 2p3w_A 1 GSHMKRFIGIRMRTITPSLVDELKASNPDFPEVSSGIYVQEVAPNSPSQRGGIQDGDIIVKVNGRPLVDSSELQEAVL-- 78 (112)
T ss_dssp CCCCEEECCEEEEECCHHHHHHHHHHCTTC--CCSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHHHHHHH--
T ss_pred CCcccceeeEEEecCCHHHHHHhcccCcCcccCCCCeEEEEECCCChHHHCCCCCCCEEEEECCEECCCHHHHHHHHh--
Confidence 567899999999999999999998765555555689999999999999999999999999999999999999998884
Q ss_pred CCCeEEEEEEECCCeEEEEEEEecCC
Q 013444 414 VGEPLKVVVQRANDQLVTLTVIPEEA 439 (443)
Q Consensus 414 ~g~~v~l~v~R~~g~~~~l~v~~~~~ 439 (443)
.++++.|+|.| +++.+++++++.+.
T Consensus 79 ~g~~v~l~v~R-~g~~~~~~v~~~~~ 103 (112)
T 2p3w_A 79 TESPLLLEVRR-GNDDLLFSIAPEVV 103 (112)
T ss_dssp HCSSEEEEEEE-TTEEEEEEECCEEE
T ss_pred CCCeEEEEEEE-CCEEEEEEEEEeee
Confidence 47789999999 88888888877643
No 33
>2pfe_A Protease A, alkaline serine protease, TFPA; beta-barrels, thermophIle, kinetic stabilit thermostability, protein folding; HET: 2AB; 1.44A {Thermobifida fusca}
Probab=99.63 E-value=1.2e-15 Score=139.00 Aligned_cols=149 Identities=20% Similarity=0.284 Sum_probs=109.0
Q ss_pred EEEEEEeC--CCEEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEEEEeec-CCCCEEEEEEcCCCC-CC--------
Q 013444 157 GSGAIVDA--DGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGTVLNAD-FHSDIAIVKINSKTP-LP-------- 224 (443)
Q Consensus 157 GSGfiI~~--~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~dg~~~~a~vv~~d-~~~DlAlLkl~~~~~-~~-------- 224 (443)
-+||++.+ +++||||+||+.+. ..+.+ +.++++..| +..|+||||++.+.. .+
T Consensus 17 T~Gf~v~~~~~~~ilTa~Hc~~~g--------~~v~~-------~~g~v~~~~~~~~D~Alikl~~~~~~~~~v~~~~g~ 81 (186)
T 2pfe_A 17 SIGFSVRQGSQTGFATAGHCGSTG--------TRVSS-------PSGTVAGSYFPGRDMGWVRITSADTVTPLVNRYNGG 81 (186)
T ss_dssp ECCEEEEETTEEEEEECGGGCCTT--------CEEBT-------TTEEEEEEECSBSCEEEEEECTTSEEEEEEECSSSC
T ss_pred EeeEEEEcCCeeEEEEChhhCCCC--------CEEEE-------eeEEEEecCCCCCCEEEEEeCCCcccccceeccCCc
Confidence 35899965 35999999999873 23332 557788887 889999999986421 11
Q ss_pred ccccCCCCCCCCCCEEEEEecCCCCCCceEEEEEEeeecCccCCCCCCccceEEEEcccCCCCCccceeeecCCCEEEEE
Q 013444 225 AAKLGTSSKLCPGDWVVAMGCPHSLQNTVTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAGNSGGPLVNIDGEIVGIN 304 (443)
Q Consensus 225 ~~~l~~s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvd~~G~VVGI~ 304 (443)
++++..+..+++|++|+.+|.+.+ .+.|+|+.+++... +.. .....+++++....+|||||||++ +|+++||+
T Consensus 82 ~~~i~~~~~~~vG~~vc~~G~~tG----~t~G~vs~~~~tv~-~~~-~~~~~~~~~~~c~~~GDSGgpl~~-~~~~vGi~ 154 (186)
T 2pfe_A 82 TVTVTGSQEAATGSSVCRSGATTG----WRCGTIQSKNQTVR-YAE-GTVTGLTRTTACAEGGDSGGPWLT-GSQAQGVT 154 (186)
T ss_dssp EEECCBCCCCCTTCEEEEEETTTE----EEEEEEEEEEEEEE-ETT-EEEEEEEEESCCCCTTCTTCEEEE-TTEEEEEE
T ss_pred eEecCCCCCCCCCCeEEEEEeCCc----eEEEEEEEEeeeEE-eCC-ceEeceEeccEEecCCCccCeEEE-CCEEEEEE
Confidence 223555677899999999999876 78899988877632 111 123456777777889999999995 88999999
Q ss_pred EEEeec--CCCeEEEEeHHHHHHHH
Q 013444 305 IMKVAA--ADGLSFAVPIDSAAKII 327 (443)
Q Consensus 305 s~~~~~--~~g~~~aIPi~~i~~~l 327 (443)
+++... ..+..|++|++.+++.+
T Consensus 155 s~g~~~c~~~~~~~~~pi~~~l~~~ 179 (186)
T 2pfe_A 155 SGGTGDCRSGGITFFQPINPLLSYF 179 (186)
T ss_dssp EEEEEETTTEEEEEEEEHHHHHHHH
T ss_pred eecCCCCCCCCcEEEEEHHHHHHHC
Confidence 997642 23578999988766553
No 34
>1mbm_A NSP4 proteinase, chymotrypsin-like serine protease; serine proteinase, chymotrypsin-like proteinase, collapsed O HOLE, transferase; 2.00A {Equine arteritis virus} SCOP: b.47.1.3
Probab=99.61 E-value=3.6e-15 Score=132.25 Aligned_cols=125 Identities=18% Similarity=0.174 Sum_probs=94.2
Q ss_pred CCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEEEEeecCCCCEEE
Q 013444 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGTVLNADFHSDIAI 214 (443)
Q Consensus 135 ~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAl 214 (443)
+.-+|.|... ..+.||||+|+.+|++||++||+.+. ....|+. +|+++. +.+++..|+|+
T Consensus 3 ~~n~~~v~g~--------~~G~GsgF~i~~~g~vVTA~HVv~~~--------~~~~V~~-~G~~~~---Vgf~~~~DlA~ 62 (198)
T 1mbm_A 3 RGNVGFVAGS--------SYGTGSVWTRNNEVVVLTASHVVGRA--------NMATLKI-GDAMLT---LTFKKNGDFAE 62 (198)
T ss_dssp CTTEEEEESS--------SEEEEEEEEETTEEEEEEEHHHHCTT--------CEEEEEE-TTEEEE---EECEEETTEEE
T ss_pred ccceEEEecc--------cCCccceEEECCCeEEEEeeeEEccC--------ceEEEEE-CCEEEE---eecccCCcEEE
Confidence 4456666532 23679999999999999999999763 5777888 899987 67779999999
Q ss_pred EEE---cCCCCCCccccCCCCCCCCCCEEEEEecCCCCCCceEEEEEEeeecCccCCCCCCccceEEEEcccCCCCCccc
Q 013444 215 VKI---NSKTPLPAAKLGTSSKLCPGDWVVAMGCPHSLQNTVTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAGNSGG 291 (443)
Q Consensus 215 Lkl---~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGG 291 (443)
+++ +.+..+|+++|+. ++.|+.-+. .+.|.+..+... ...++++ .+|||||
T Consensus 63 l~v~~~~~~g~~P~l~las---p~vG~a~~~----------~~tG~~~~l~g~----------~g~l~~t---~PGDSGs 116 (198)
T 1mbm_A 63 AVTTQSELPGNWPQLHFAQ---PTTGPASWC----------TATGDEEGLLSG----------EVCLAWT---TSGDSGS 116 (198)
T ss_dssp EEECTTTSCSCCCBCCBCC---CCSEEEEEE----------ETTEEEEEEECS----------SCEECCC---CGGGTTC
T ss_pred EEeeccCCCCCCcccccCC---CcccceEEe----------eccccEEEEecC----------CceeEcC---CCCCCCC
Confidence 999 6566778888843 688883222 344555554411 3456666 7899999
Q ss_pred eeeecCCCEEEEEEE
Q 013444 292 PLVNIDGEIVGINIM 306 (443)
Q Consensus 292 Plvd~~G~VVGI~s~ 306 (443)
|++|.+ +||||+++
T Consensus 117 PVl~~~-~vIGV~T~ 130 (198)
T 1mbm_A 117 AVVQGD-AVVGVHTG 130 (198)
T ss_dssp EEEETT-EEEEEEEE
T ss_pred ccccCC-eEEEEEec
Confidence 999998 99999998
No 35
>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A* 4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A* 2hvx_A* 3s0n_A* 2rdl_A
Probab=99.58 E-value=5.1e-13 Score=124.74 Aligned_cols=183 Identities=19% Similarity=0.152 Sum_probs=118.6
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEE
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVL 204 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d---------g~~~~a~vv 204 (443)
-.|.+|.|....... ....|+|.+|+++ +|||+|||+.. .+.|.+.. .+.+...-+
T Consensus 11 ~~Pw~v~l~~~~~~~----~~~~CgGtLI~~~-~VLTAAhC~~~----------~~~v~~G~~~~~~~~~~~~~~~v~~~ 75 (226)
T 4ag1_A 11 SRPYMAYLEIVTSNG----PSKFCGGFLIRRN-FVLTAAHCAGR----------SITVTLGAHNITEEEDTWQKLEVIKQ 75 (226)
T ss_dssp SSTTEEEEEEECSSS----SCEEEEEEEEETT-EEEECGGGCCS----------EEEEEESCSBTTSCCTTCEEEEEEEE
T ss_pred CCCcEEEEEEEcCCC----cccEEEEEEEeCC-EEEECcccCCC----------CeEEEeCCcccCCCCCcceEEEEEEE
Confidence 367888887653221 1357999999988 99999999853 45555532 134555556
Q ss_pred eecCC-------CCEEEEEEcCCC----CCCccccCCC-CCCCCCCEEEEEecCCCC-----CCceEEEEEEeeecCccC
Q 013444 205 NADFH-------SDIAIVKINSKT----PLPAAKLGTS-SKLCPGDWVVAMGCPHSL-----QNTVTAGIVSCVDRKSSD 267 (443)
Q Consensus 205 ~~d~~-------~DlAlLkl~~~~----~~~~~~l~~s-~~~~~G~~V~~iG~p~~~-----~~~~t~G~Vs~~~~~~~~ 267 (443)
..|+. +|||||+|+.+. .+.++.|... ..+..|+.+.+.||.... ...+....+..+....+.
T Consensus 76 ~~hp~y~~~~~~~DIALl~L~~~~~~~~~v~pi~l~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~ 155 (226)
T 4ag1_A 76 FRHPKYNTSTLHHDIMLLKLKEKASLTLAVGTLPFPSQFNFVPPGRMCRVAGWGRTGVLKPGSDTLQEVKLRLMDPQACS 155 (226)
T ss_dssp EECTTCCTTTCTTCCEEEEESSCCCCCSSSCCCCCC-----CCTTCEEEEEESSBSSTTSCBCSBCEEEEEEEECGGGGT
T ss_pred EeCCCCCCCCCcCcEEEEEECCCCccCCceeccccCCcccCCCCCCEEEEEECCCCCCCCCCCCEeEEEEEEEcChHHcc
Confidence 66654 599999998753 3345556432 234689999999997532 233444445444444443
Q ss_pred CCCCCccceEEEEc-----ccCCCCCccceeeecCCCEEEEEEEEeecCCCeEEEEeHHHHHHHHHHHHH
Q 013444 268 LGLGGMRREYLQTD-----CAINAGNSGGPLVNIDGEIVGINIMKVAAADGLSFAVPIDSAAKIIEQFKK 332 (443)
Q Consensus 268 ~~~~~~~~~~i~~d-----~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~g~~~aIPi~~i~~~l~~l~~ 332 (443)
..........+... ...|.|+|||||+- ++.++||++++......-+.+.-+...+++|++..+
T Consensus 156 ~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~-~~~l~Gi~S~g~~c~~~p~vyt~v~~~~~WI~~~i~ 224 (226)
T 4ag1_A 156 HFRDFDHNLQLCVGNPRKTKSAFKGDSGGPLLC-AGVAQGIVSYGRSDAKPPAVFTRISHYRPWINQILQ 224 (226)
T ss_dssp TSTTCCTTTEEEESCTTSCCBCCTTCTTCEEEE-TTEEEEEEEECBTTCCSCEEEEEHHHHHHHHHHHHH
T ss_pred cccCcCccceEeeccCCCCCcCccCCCCCceEE-cCEEEEEEEECCCCCCCCCEEEEhHHHHHHHHHHHh
Confidence 11111123345442 35789999999995 789999999986543335667888888888887664
No 36
>1cgh_A Cathepsin G; inflammation, specificity, serine protease, hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A* 1kyn_A*
Probab=99.57 E-value=2.3e-13 Score=127.26 Aligned_cols=182 Identities=19% Similarity=0.211 Sum_probs=115.1
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEE
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVL 204 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d---------g~~~~a~vv 204 (443)
-.|.+|.|...... ....|+|.+|+++ +|||+|||+.+ .+.|.+.. .+.+..+-+
T Consensus 11 ~~Pw~v~l~~~~~~-----~~~~CgGsLI~~~-~VLTAAHC~~~----------~~~v~~G~~~~~~~~~~~~~~~v~~i 74 (224)
T 1cgh_A 11 SRPYMAYLQIQSPA-----GQSRCGGFLVRED-FVLTAAHCWGS----------NINVTLGAHNIQRRENTQQHITARRA 74 (224)
T ss_dssp SSTTEEEEEESTTT-----TSCEEEEEEEETT-EEEECGGGCCS----------SEEEEESCSBTTSCCTTCEEEEEEEE
T ss_pred CCCcEEEEEEECCC-----CCeEEEEEEeeCC-EEEEhHHhCCC----------CCEEEEeecccCCCCCccEEEEEEEE
Confidence 35788888754321 1267999999988 99999999965 23444421 345566666
Q ss_pred eecCC-------CCEEEEEEcCCC----CCCccccCCCC-CCCCCCEEEEEecCCCC----CCceEEEEEEeeecCccCC
Q 013444 205 NADFH-------SDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPHSL----QNTVTAGIVSCVDRKSSDL 268 (443)
Q Consensus 205 ~~d~~-------~DlAlLkl~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~----~~~~t~G~Vs~~~~~~~~~ 268 (443)
..|+. +|||||+|+.+. .+.|+.|.... .+..|+.++++||.... ...+....+..+....+..
T Consensus 75 ~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~l~~~~~~i~~~~~C~~ 154 (224)
T 1cgh_A 75 IRHPQYNQRTIQNDIMLLQLSRRVRRNRNVNPVALPRAQEGLRPGTLCTVAGWGRVSMRRGTDTLREVQLRVQRDRQCLR 154 (224)
T ss_dssp EECTTCBTTTTBSCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSSSCCCSBCEEEEEEBCCHHHHHH
T ss_pred EcCCCCCCCCCcCCEEEEEECCCCcCCCceEeeECCCCCCCCCCCCEEEEEECCcCCCCCCCCcceEEEEEeeCHHHHHH
Confidence 66654 599999998763 35577775433 35689999999997643 2233333333332222211
Q ss_pred CCCCcc-ceEEEEc-----ccCCCCCccceeeecCCCEEEEEEEEeecCCCeEEEEeHHHHHHHHHHHHH
Q 013444 269 GLGGMR-REYLQTD-----CAINAGNSGGPLVNIDGEIVGINIMKVAAADGLSFAVPIDSAAKIIEQFKK 332 (443)
Q Consensus 269 ~~~~~~-~~~i~~d-----~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~g~~~aIPi~~i~~~l~~l~~ 332 (443)
.+.... ...+... ...|.|+|||||+. +|.++||++++......-+.+.-+....+++++..+
T Consensus 155 ~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~~~~p~vyt~V~~~~~WI~~~~~ 223 (224)
T 1cgh_A 155 IFGSYDPRRQICVGDRRERKAAFKGDSGGPLLC-NNVAHGIVSYGKSSGVPPEVFTRVSSFLPWIRTTMR 223 (224)
T ss_dssp HCTTCCTTTEEEECCTTSCCBCCTTCTTCEEEE-TTEEEEEEEECCTTCCSCEEEEEGGGGHHHHHHHHH
T ss_pred HhCcCCCcceEeeccCCCCCeEeeCCCccceEE-ccEEEEEEEEECCCCCCCeEEEEHHHhHHHHHHHhh
Confidence 111111 2255542 35799999999996 679999999976322234556777777777776543
No 37
>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG; 0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A 1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A* 1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E 1pqa_A*
Probab=99.56 E-value=1.4e-13 Score=128.69 Aligned_cols=181 Identities=20% Similarity=0.304 Sum_probs=116.2
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeC------CCcEEEEEEEeec
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQ------DGRTFEGTVLNAD 207 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~------dg~~~~a~vv~~d 207 (443)
-.|.+|.|... +...|+|++|+++ +|||+|||+.+.. ...+.|.+. +++.+..+-+..|
T Consensus 11 ~~Pw~v~l~~~--------~~~~CgGtLI~~~-~VLTAAHC~~~~~------~~~~~v~~G~~~~~~~~~~~~v~~i~~h 75 (224)
T 1pq7_A 11 DFPFIVSISRN--------GGPWCGGSLLNAN-TVLTAAHCVSGYA------QSGFQIRAGSLSRTSGGITSSLSSVRVH 75 (224)
T ss_dssp SSTTEEEEEET--------TEEEEEEEEEETT-EEEECHHHHTTSC------GGGEEEEESCSBSSSSSEEECEEEEEEC
T ss_pred CcCeEEEEEEC--------CCeEEEEEEecCC-EEEEcHHccCCCC------CCceEEEeCcceecCCCEEEEEEEEEEC
Confidence 35788888742 1257999999988 9999999997532 235666653 2455666666777
Q ss_pred CC-----CCEEEEEEcCCC----CCCccccCC-CCCCCCCCEEEEEecCCCCC------CceEEEEEEeeecCccC--CC
Q 013444 208 FH-----SDIAIVKINSKT----PLPAAKLGT-SSKLCPGDWVVAMGCPHSLQ------NTVTAGIVSCVDRKSSD--LG 269 (443)
Q Consensus 208 ~~-----~DlAlLkl~~~~----~~~~~~l~~-s~~~~~G~~V~~iG~p~~~~------~~~t~G~Vs~~~~~~~~--~~ 269 (443)
+. +|||||+++.+. .+.++.|.. ...+..|+.++++||+.... ..+....+..+....+. +.
T Consensus 76 p~y~~~~~DiALl~L~~~~~~~~~v~picL~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~ 155 (224)
T 1pq7_A 76 PSYSGNNNDLAILKLSTSIPSGGNIGYARLAASGSDPVAGSSATVAGWGATSEGGSSTPVNLLKVTVPIVSRATCRAQYG 155 (224)
T ss_dssp TTCBTTBTCCEEEEESSCCCCBTTBCCCCBCCTTCCCCTTCEEEEEESCCSSTTCSCCCSBCEEEEEEEECHHHHHHHHC
T ss_pred CCCCCCCCCEEEEEeCCCCcCCCcccceecCCcccCCCCCCEEEEEecCCcCCCCCcccceeeEeEEEEEcHHHhhHhhc
Confidence 64 599999998763 345677753 24557899999999976421 23344444333322221 11
Q ss_pred CCCccceEEEEc-----ccCCCCCccceeeecCCCEEEEEEEEeecC--CCeEEEEeHHHHHHHHHH
Q 013444 270 LGGMRREYLQTD-----CAINAGNSGGPLVNIDGEIVGINIMKVAAA--DGLSFAVPIDSAAKIIEQ 329 (443)
Q Consensus 270 ~~~~~~~~i~~d-----~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~--~g~~~aIPi~~i~~~l~~ 329 (443)
........+... ...|.|+|||||+..+|.++||++++..=. ..-+.+.-+...++++++
T Consensus 156 ~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~g~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~ 222 (224)
T 1pq7_A 156 TSAITNQMFCAGVSSGGKDSCQGDSGGPIVDSSNTLIGAVSWGNGCARPNYSGVYASVGALRSFIDT 222 (224)
T ss_dssp TTTSCTTEEEECCTTCCCBCCTTCTTCEEECTTCCEEEEEEECSSSSCTTCCEEEEETTTSHHHHHH
T ss_pred CCCCCCCeEEeecCCCCCCCCcCCCCcceECcCCeEEEEEEeCCCCCCCCCCeEEEEHHHHHHHHHh
Confidence 011223455542 467999999999987899999999875311 123455666666666654
No 38
>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus} SCOP: b.47.1.2
Probab=99.55 E-value=8.5e-13 Score=122.95 Aligned_cols=182 Identities=20% Similarity=0.153 Sum_probs=117.3
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEE
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVL 204 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d---------g~~~~a~vv 204 (443)
-.|.+|.|....... ....|+|.+|+++ +|||+|||+.. .+.|.+.. .+.+..+.+
T Consensus 11 ~~Pw~v~l~~~~~~~----~~~~CgGtLI~~~-~VLTAAhC~~~----------~~~v~~g~~~~~~~~~~~~~~~v~~~ 75 (224)
T 3rp2_A 11 SRPYMAHLDIVTEKG----LRVICGGFLISRQ-FVLTAAHCKGR----------EITVILGAHDVRKRESTQQKIKVEKQ 75 (224)
T ss_dssp SCTTEEEEEEECTTS----CEEEEEEEESSSS-EEEECGGGCCS----------EEEEEESCSBTTSCCTTCEEEEEEEE
T ss_pred CCCcEEEEEEecCCC----cEEEEEeEEeeCC-EEEEchhcCCC----------CcEEEEeccccCcCCCCcEEEEEEEE
Confidence 368889997654221 1357999999988 99999999853 44555431 244556666
Q ss_pred eecCC-------CCEEEEEEcCCC----CCCccccCCCC-CCCCCCEEEEEecCCCC-----CCceEEEEEEeeecCccC
Q 013444 205 NADFH-------SDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPHSL-----QNTVTAGIVSCVDRKSSD 267 (443)
Q Consensus 205 ~~d~~-------~DlAlLkl~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~-----~~~~t~G~Vs~~~~~~~~ 267 (443)
..|+. +|||||+++.+. .+.++.|.... .+..|+.+++.||.... ...+....+..+....+.
T Consensus 76 ~~hp~y~~~~~~~DIALl~L~~~~~~~~~v~pi~l~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~ 155 (224)
T 3rp2_A 76 IIHESYNSVPNLHDIMLLKLEKKVELTPAVNVVPLPSPSDFIHPGAMCWAAGWGKTGVRDPTSYTLREVELRIMDEKACV 155 (224)
T ss_dssp EECTTCCSSSCCSCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESSEEETTEEECSBCEEEEEEEECGGGTT
T ss_pred EECCCccCCCCCccEEEEEcCCCcccCCcccceecCCcccCCCCCCEEEEEeCCCCCCCCCCCceeeEeeeeecChHHhc
Confidence 66654 699999998753 34566664432 35789999999997532 123334444444443332
Q ss_pred CCCCCccceEEEEc-----ccCCCCCccceeeecCCCEEEEEEEEeecCCCeEEEEeHHHHHHHHHHHH
Q 013444 268 LGLGGMRREYLQTD-----CAINAGNSGGPLVNIDGEIVGINIMKVAAADGLSFAVPIDSAAKIIEQFK 331 (443)
Q Consensus 268 ~~~~~~~~~~i~~d-----~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~g~~~aIPi~~i~~~l~~l~ 331 (443)
..........+... ...|.|+|||||+. ++.++||++++......-+.+.-+...+++|++..
T Consensus 156 ~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~-~~~l~Gi~S~g~~c~~~p~vyt~v~~y~~WI~~~i 223 (224)
T 3rp2_A 156 DYRYYEYKFQVCVGSPTTLRAAFMGDSGGPLLC-AGVAHGIVSYGHPDAKPPAIFTRVSTYVPWINAVI 223 (224)
T ss_dssp TTTCCCTTTEEEECCTTSCCBCCTTTTTCEEEE-TTEEEEEEEECCTTCCSCEEEEEHHHHHHHHHHHH
T ss_pred cccccCcCCEEEecCCCCCCeeccCCCCCeEEE-cceeeEEEEECCCCCCCCcEEEEHHHhHHHHHHHh
Confidence 10111122344432 35789999999995 67999999997653333566788888888887754
No 39
>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A
Probab=99.54 E-value=7e-13 Score=124.10 Aligned_cols=181 Identities=18% Similarity=0.170 Sum_probs=114.0
Q ss_pred CCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEEe
Q 013444 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVLN 205 (443)
Q Consensus 135 ~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d---------g~~~~a~vv~ 205 (443)
.|.+|.|...... ....|+|.+|+++ +|||+|||+.+ .+.|.+.. .+.+..+-+.
T Consensus 12 ~Pw~v~l~~~~~~-----~~~~CgGtLI~~~-~VLTAAHC~~~----------~~~v~~G~~~~~~~~~~~~~~~v~~i~ 75 (227)
T 1iau_A 12 RPYMAYLMIWDQK-----SLKRCGGFLIRDD-FVLTAAHCWGS----------SINVTLGAHNIKEQEPTQQFIPVKRPI 75 (227)
T ss_dssp STTEEEEEEECSS-----CEEEEEEEEEETT-EEEECGGGCCS----------EEEEEESCSBTTSCCTTCEEEEEEEEE
T ss_pred cCcEEEEEEECCC-----CceEEEEEEEcCC-EEEECHHhCCC----------ceEEEEccccccCCCCccEEEEEEEEE
Confidence 5888988754321 1256999999988 99999999964 34555432 2445555555
Q ss_pred ecC-------CCCEEEEEEcCCC----CCCccccCCCC-CCCCCCEEEEEecCCCCC-----CceEEEEEEeeecCccCC
Q 013444 206 ADF-------HSDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPHSLQ-----NTVTAGIVSCVDRKSSDL 268 (443)
Q Consensus 206 ~d~-------~~DlAlLkl~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~~-----~~~t~G~Vs~~~~~~~~~ 268 (443)
.|+ .+|||||+|+.+. .+.|+.|.... .+..|+.++++||..... ..+....+.-+....+..
T Consensus 76 ~Hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~g~~~~v~GwG~~~~~~~~~~~L~~~~~~i~~~~~C~~ 155 (227)
T 1iau_A 76 PHPAYNPKNFSNDIMLLQLERKAKRTRAVQPLRLPSNKAQVKPGQTCSVAGWGQTAPLGKHSHTLQEVKMTVQEDRKCES 155 (227)
T ss_dssp ECTTCCTTTCTTCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESSCSSSSSCCCSBCEEEEEEBCCHHHHHH
T ss_pred CCCCCCCCCCCCCeEEEEECCcccCCCceecccCCCCCCCCCCCCEEEEEEcccCCCCCCcCceeeEeeeeeechHHhhh
Confidence 555 3599999998763 34567775433 346899999999976421 233333333332222211
Q ss_pred CCC--CccceEEEEc-----ccCCCCCccceeeecCCCEEEEEEEEeecCCCeEEEEeHHHHHHHHHHHHH
Q 013444 269 GLG--GMRREYLQTD-----CAINAGNSGGPLVNIDGEIVGINIMKVAAADGLSFAVPIDSAAKIIEQFKK 332 (443)
Q Consensus 269 ~~~--~~~~~~i~~d-----~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~g~~~aIPi~~i~~~l~~l~~ 332 (443)
.+. ......+... ...|.|+|||||+- +|.++||++++......-+.+.-+....+++++..+
T Consensus 156 ~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~gc~~~~~p~vyt~v~~~~~WI~~~~~ 225 (227)
T 1iau_A 156 DLRHYYDSTIELCVGDPEIKKTSFKGDSGGPLVC-NKVAQGIVSYGRNNGMPPRACTKVSSFVHWIKKTMK 225 (227)
T ss_dssp HTTTTCCTTTEEEESCTTSCCBCCTTCTTSEEEE-TTEEEEEEEEECTTSCSCEEEEEGGGGHHHHHHHHH
T ss_pred HhccccCCCcEEEeECCCCCCeeeecCCCchheE-eeEEEEEEeEecCCCCCCeEEEEHHHHHHHHHHHHh
Confidence 111 0111245542 45789999999996 689999999983322234556777777788776553
No 40
>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein, zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo sapiens} SCOP: b.47.1.2
Probab=99.53 E-value=7e-13 Score=123.46 Aligned_cols=177 Identities=21% Similarity=0.260 Sum_probs=111.2
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEE
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVL 204 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d---------g~~~~a~vv 204 (443)
-.|.+|.|...... +...|+|.+|+++ +|||+|||+.+.. ...+.|.+.. .+.+....+
T Consensus 11 ~~Pw~v~l~~~~~~-----~~~~CgGtLIs~~-~VLTAAHC~~~~~------~~~~~v~~G~~~~~~~~~~~~~~~v~~i 78 (221)
T 1fuj_A 11 SRPYMASLQMRGNP-----GSHFCGGTLIHPS-FVLTAAHCLRDIP------QRLVNVVLGAHNVRTQEPTQQHFSVAQV 78 (221)
T ss_dssp SCTTEEEEEETTBT-----TCCCEEEEEEETT-EEEECGGGGSSSC------GGGEEEEESCSBTTSCCTTCEEEEEEEE
T ss_pred CcCCEEEEEEecCC-----CCEEEEEEEecCC-EEEEchHhcCcCC------CCceEEEEeeeeccCCCCceEEEEEEEE
Confidence 35888998764321 1356999999988 9999999997632 2345666542 234444444
Q ss_pred eec------CCCCEEEEEEcCCC----CCCccccCCCC-CCCCCCEEEEEecCCCCC-----CceEEEEEEeeecCccCC
Q 013444 205 NAD------FHSDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPHSLQ-----NTVTAGIVSCVDRKSSDL 268 (443)
Q Consensus 205 ~~d------~~~DlAlLkl~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~~-----~~~t~G~Vs~~~~~~~~~ 268 (443)
..| ..+|||||+++.+. .+.++.|.... .+..|+.++++||..... ..+....+..+ ...+.
T Consensus 79 ~~h~y~~~~~~~DiALl~L~~~~~~~~~v~picL~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~~~-~~~C~- 156 (221)
T 1fuj_A 79 FLNNYDAENKLNDILLIQLSSPANLSASVATVQLPQQDQPVPHGTQCLAMGWGRVGAHDPPAQVLQELNVTVV-TFFCR- 156 (221)
T ss_dssp EECCCBTTTTBCCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSCSSSCBCSBCEEEEEEEE-CTTCC-
T ss_pred EeCCCCCCCCcccEEEEEeCCccccCCcceeeECCCCcCCCCCCCEEEEEEeCCCCCCCCHHHHhhcccceEE-eeecC-
Confidence 333 24699999998763 35677775433 346799999999975432 22333333322 22111
Q ss_pred CCCCccceEEEE-----cccCCCCCccceeeecCCCEEEEEEEEee---cCCCeEEEEeHHHHHHHHHHHH
Q 013444 269 GLGGMRREYLQT-----DCAINAGNSGGPLVNIDGEIVGINIMKVA---AADGLSFAVPIDSAAKIIEQFK 331 (443)
Q Consensus 269 ~~~~~~~~~i~~-----d~~i~~G~SGGPlvd~~G~VVGI~s~~~~---~~~g~~~aIPi~~i~~~l~~l~ 331 (443)
...+.. ....|.|+|||||+. +|.++||++++.. ....-+.+.-+...+++|++..
T Consensus 157 ------~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~s~~~~gC~~~~~p~vyt~v~~~~~WI~~~i 220 (221)
T 1fuj_A 157 ------PHNICTFVPRRKAGICFGDSGGPLIC-DGIIQGIDSFVIWGCATRLFPDFFTRVALYVDWIRSTL 220 (221)
T ss_dssp ------TTEEEEECSSSSCBCCTTCTTCEEEE-TTEEEEEEEECSSSTTCSSSCEEEEEGGGGHHHHHHHH
T ss_pred ------CceeeeccCCCCCCCCCCCCCCeeEE-CCEEeEEEEEeccCCCCCCCCcEEEeHHHHHHHHHHHh
Confidence 113333 346799999999996 7899999998431 1122355677777777776643
No 41
>1a7s_A Heparin binding protein; serine protease homolog, endotoxin binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2 PDB: 1ae5_A* 1fy3_A* 1fy1_A*
Probab=99.52 E-value=1.1e-12 Score=122.57 Aligned_cols=178 Identities=17% Similarity=0.246 Sum_probs=112.9
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCCC----------cEEEEEE
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDG----------RTFEGTV 203 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~dg----------~~~~a~v 203 (443)
-.|.+|.|... ....|+|.+|+++ +|||+|||+.+.. ...+.|.+... +.+..+.
T Consensus 11 ~~Pw~v~l~~~--------~~~~CgGtLI~~~-~VLTAAHC~~~~~------~~~~~V~~G~~~~~~~~~~~~~~~~v~~ 75 (225)
T 1a7s_A 11 QFPFLASIQNQ--------GRHFCGGALIHAR-FVMTAASCFQSQN------PGVSTVVLGAYDLRRRERQSRQTFSISS 75 (225)
T ss_dssp SSTTEEEEEET--------TEEEEEEEEEETT-EEEECGGGC----------CCSEEEEESCSSTTSCCTTTCEEEEEEE
T ss_pred CCCcEEEEecC--------CCcEEEEEEeeCC-EEEEchhccCCCC------CCceEEEEeeeECCCCCCcceeEEeEEE
Confidence 35788888743 1256999999988 9999999997632 23455665421 3444444
Q ss_pred Eeec------CCCCEEEEEEcCCC----CCCccccCCCC-CCCCCCEEEEEecCCCCC-----CceEEEEEEeeecCccC
Q 013444 204 LNAD------FHSDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPHSLQ-----NTVTAGIVSCVDRKSSD 267 (443)
Q Consensus 204 v~~d------~~~DlAlLkl~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~~-----~~~t~G~Vs~~~~~~~~ 267 (443)
+..| ..+|||||+++.+. .+.++.|.... .+..|+.++++||+.... .......+.-+....+.
T Consensus 76 i~~h~y~~~~~~~DIALl~L~~~~~~~~~v~pi~L~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~ 155 (225)
T 1a7s_A 76 MSENGYDPQQNLNDLMLLQLDREANLTSSVTILPLPLQNATVEAGTRCQVAGWGSQRSGGRLSRFPRFVNVTVTPEDQCR 155 (225)
T ss_dssp EECSSCBTTTTBSCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESCCSSTTCCCCSSCEEEEEEECCGGGSC
T ss_pred EecccccCCCCcCCEEEEEcCCcccCCCceeEEEcCCCcCCCCCCCEEEEEeCCcCCCCCCcccccceeeeEECCHHHhc
Confidence 4433 34799999998763 24566665432 346899999999986432 23333333333333221
Q ss_pred CCCCCccceEEEE-----cccCCCCCccceeeecCCCEEEEEEEEeecC-CCeEEEEeHHHHHHHHHHHHHcC
Q 013444 268 LGLGGMRREYLQT-----DCAINAGNSGGPLVNIDGEIVGINIMKVAAA-DGLSFAVPIDSAAKIIEQFKKNG 334 (443)
Q Consensus 268 ~~~~~~~~~~i~~-----d~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~-~g~~~aIPi~~i~~~l~~l~~~g 334 (443)
...+.. ....|.|+|||||+. +|.++||++++.... .+-+.+.-+...+++|++..+..
T Consensus 156 -------~~~~Ca~~~~~~~~~C~GDSGgPl~~-~g~l~Gi~S~g~~~C~~~p~vyt~V~~~~~WI~~~~~~~ 220 (225)
T 1a7s_A 156 -------PNNVCTGVLTRRGGICNGDGGTPLVC-EGLAHGVASFSLGPCGRGPDFFTRVALFRDWIDGVLNNP 220 (225)
T ss_dssp -------TTEEEEECSSSSCBCCTTCTTCEEEE-TTEEEEEEEEECSSTTSSCEEEEEGGGGHHHHHHHHHSC
T ss_pred -------cCceEEeccCCCCCcccCCCcchhee-CCEEEEEEEEccCCcCCCCcEEEEhHHhHHHHHHHhcCC
Confidence 123333 246799999999996 479999999974321 12456677888888888877643
No 42
>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine esterase, glycosylation, extracellular; HET: NAG; 1.75A {Agkistrodon halys}
Probab=99.51 E-value=1.4e-12 Score=122.60 Aligned_cols=184 Identities=16% Similarity=0.162 Sum_probs=115.3
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC-------C-cEEEEEEEe
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD-------G-RTFEGTVLN 205 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d-------g-~~~~a~vv~ 205 (443)
-.|.+|.|.... .+...|+|.+|+++ ||||+|||+... ..+.+-..+ . ..+..+.+.
T Consensus 11 ~~Pw~v~l~~~~------~~~~~CgGtLI~~~-~VLTAAHC~~~~--------~~v~~g~~~~~~~~~~~~~~~~~~~~~ 75 (238)
T 4e7n_A 11 EHRFLVALYTSR------SRTLFCGGTLINQE-WVLTAAHCDRKN--------FRIKLGMHSKKVPNEDEQTRVPKEKFF 75 (238)
T ss_dssp SCTTEEEEECTT------TCCEEEEEEECSSS-EEEECGGGCCSS--------CEEEESCSCSSSCCTTCEEECEEEEEC
T ss_pred CcCcEEEEEECC------CCCEEEEEEEecCC-EEEEhHHcCCCC--------CeEEeceeeccccCCCceeEeeeeeEE
Confidence 368889997543 12357999999988 999999998642 222222111 1 122233443
Q ss_pred ecC-------CCCEEEEEEcCCC----CCCccccCCCCCCCCCCEEEEEecCCCC------CCceEEEEEEeeecCccCC
Q 013444 206 ADF-------HSDIAIVKINSKT----PLPAAKLGTSSKLCPGDWVVAMGCPHSL------QNTVTAGIVSCVDRKSSDL 268 (443)
Q Consensus 206 ~d~-------~~DlAlLkl~~~~----~~~~~~l~~s~~~~~G~~V~~iG~p~~~------~~~~t~G~Vs~~~~~~~~~ 268 (443)
.++ .+|||||+++.+. .+.++.|.. .....|+.++++||+... ........+..+....+..
T Consensus 76 ~h~~~~~~~~~~DIALl~L~~~v~~~~~v~pi~l~~-~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~ 154 (238)
T 4e7n_A 76 CLSSKNYTLWDKDIMLIRLDSPVKNSKHIAPFSLPS-SPPSVGSVCRIMGWGRISPTEGTYPDVPHCVNINLLEYEMCRA 154 (238)
T ss_dssp SSTTCCCCSSSCCCEEEEESSCCCCBTTBCCCCCCS-SCCCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECGGGGTT
T ss_pred cCCCCCCCCCCCcEEEEEeCCCccCCCceeeeeCCC-CCCCCCCEEEEEECCCCCCCCCCCCccceEeeccccCHHHHhh
Confidence 343 4699999998753 345677754 455679999999998532 2234444454444444332
Q ss_pred CCC----CccceEEEE-----cccCCCCCccceeeecCCCEEEEEEEEeecC---CCeEEEEeHHHHHHHHHHHHHcC
Q 013444 269 GLG----GMRREYLQT-----DCAINAGNSGGPLVNIDGEIVGINIMKVAAA---DGLSFAVPIDSAAKIIEQFKKNG 334 (443)
Q Consensus 269 ~~~----~~~~~~i~~-----d~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~---~g~~~aIPi~~i~~~l~~l~~~g 334 (443)
.+. ......+.. ....|.|+|||||+. +++++||++++.... ..-+.+.-+...+++|++..+..
T Consensus 155 ~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~~~ 231 (238)
T 4e7n_A 155 PYPEFELPATSRTLCAGILEGGKDTCKGDSGGPLIC-NGQFQGIASWGDDPCAQPHKPAAYTKVFDHLDWIENIIAGN 231 (238)
T ss_dssp TCGGGCCCSCCSEEEEECTTCSCBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEESGGGHHHHHHHHTTC
T ss_pred hcccccCCCCCCeEEeCCCCCCCccCCCCCCcceEE-CCEEEEEEEEeCCCCCCCCCCeEEEEhHHHHHHHHHHHhcC
Confidence 221 112234444 245799999999995 789999999985421 22455677778888888776543
No 43
>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET: NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB: 2aip_A*
Probab=99.51 E-value=7.7e-13 Score=124.24 Aligned_cols=179 Identities=15% Similarity=0.189 Sum_probs=112.3
Q ss_pred CCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC--------CcEEEEEEEee
Q 013444 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD--------GRTFEGTVLNA 206 (443)
Q Consensus 135 ~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d--------g~~~~a~vv~~ 206 (443)
.|.+|.|.. + ...|+|.+|+++ +|||+|||+.+. ..+.+-..+ .+.+..+.+..
T Consensus 12 ~Pw~v~l~~----~-----~~~CgGsLIs~~-~VLTAAHC~~~~--------~~v~~G~~~~~~~~~~~~~~~~v~~~~~ 73 (231)
T 2aiq_A 12 HRFLALVYA----N-----GSLCGGTLINQE-WVLTARHCDRGN--------MRIYLGMHNLKVLNKDALRRFPKEKYFC 73 (231)
T ss_dssp CTTEEEEEE----T-----TEEEEEEECSSS-EEEECGGGCCSS--------CEEEESCSCTTSCCTTCEEECEEEEECC
T ss_pred CCeEEEEEc----C-----CCeEEEEEEeCC-EEEEcHHcCCCC--------CEEEEecccccccCCCceEEEEEEEEEE
Confidence 578888862 1 256999999987 999999998751 122221111 12344455555
Q ss_pred cC-------CCCEEEEEEcCCC----CCCccccCCCCCCCCCCEEEEEecCCCC------CCceEEEEEEeeecCccCCC
Q 013444 207 DF-------HSDIAIVKINSKT----PLPAAKLGTSSKLCPGDWVVAMGCPHSL------QNTVTAGIVSCVDRKSSDLG 269 (443)
Q Consensus 207 d~-------~~DlAlLkl~~~~----~~~~~~l~~s~~~~~G~~V~~iG~p~~~------~~~~t~G~Vs~~~~~~~~~~ 269 (443)
|+ .+|||||+++.+. .+.++.|.. .....|+.++++||+... ...+....+..+....+...
T Consensus 74 hp~y~~~~~~~DIALl~L~~~v~~~~~v~picL~~-~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~ 152 (231)
T 2aiq_A 74 LNTRNDTIWDKDIMLIRLNRPVRNSAHIAPLSLPS-NPPSVGSVCRIMGWGTITSPNATLPDVPHCANINILDYAVCQAA 152 (231)
T ss_dssp SSCCSSSTTTTCCEEEEESSCCCCBTTBCCCCCCS-SCCCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECHHHHHHH
T ss_pred CCCCCCCCCCCCEEEEEecCCCCCCCcEEeeECCC-CCCCCCCEEEEEeCCccCCCCCccCchhhhccceecchhhhhhh
Confidence 54 3599999998763 345777754 344679999999998632 22333344433333222111
Q ss_pred CCCccceEEEEc-----ccCCCCCccceeeecCCCEEEEEEEEeecC---CCeEEEEeHHHHHHHHHHHHHc
Q 013444 270 LGGMRREYLQTD-----CAINAGNSGGPLVNIDGEIVGINIMKVAAA---DGLSFAVPIDSAAKIIEQFKKN 333 (443)
Q Consensus 270 ~~~~~~~~i~~d-----~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~---~g~~~aIPi~~i~~~l~~l~~~ 333 (443)
+.......+... ...|.|+|||||+. +|+++||++++.... ..-+.+.-+...+++|++..+.
T Consensus 153 ~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~~ 223 (231)
T 2aiq_A 153 YKGLAATTLCAGILEGGKDTCKGDSGGPLIC-NGQFQGILSVGGNPCAQPRKPGIYTKVFDYTDWIQSIISG 223 (231)
T ss_dssp CTTCCSSEEEEECTTCSCBCCTTCTTCEEEE-TTEEEEEEEEECSSTTCTTCCEEEEEGGGGHHHHHHHHHT
T ss_pred hcCCCcCcEEeccCCCCCcccCCcCCCcEEE-CCEEEEEEEEeCCCCCCCCCCEEEEEHHHHHHHHHHHHcC
Confidence 111223344442 46799999999996 689999999973321 2245567788888888877654
No 44
>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double six-stranded beta-barrels, hydrola glycosylation; HET: NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB: 3s9b_A* 3s9a_A* 3sbk_A*
Probab=99.51 E-value=2.2e-12 Score=120.94 Aligned_cols=182 Identities=17% Similarity=0.160 Sum_probs=115.7
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC--------CcE--EEEEE
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD--------GRT--FEGTV 203 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d--------g~~--~~a~v 203 (443)
-.|.+|.|..... +...|+|.+|+++ ||||+|||+.. .+.|.+.. ... +....
T Consensus 11 ~~Pw~v~l~~~~~------~~~~CgGtLI~~~-~VLTAAHC~~~----------~~~v~~g~~~~~~~~~~~~~~~~~~~ 73 (234)
T 3s9c_A 11 EHPFLVALYTSAS------STIHCAGALINRE-WVLTAAHCDRR----------NIRIKLGMHSKNIRNEDEQIRVPRGK 73 (234)
T ss_dssp SCTTEEEEEETTE------EEEEEEEEEEETT-EEEECGGGCCT----------TEEEEESCSSSSSCCTTCEEECEEEE
T ss_pred CCCeEEEEEECCC------CcEEEeeEEeeCC-EEEEchhhcCC----------CceEEEeecccccccCCcceEEeeeE
Confidence 3678888864321 1256999999988 99999999864 23344321 111 22233
Q ss_pred EeecC-------CCCEEEEEEcCC----CCCCccccCCCCCCCCCCEEEEEecCCCC----CCceEEEEEEeeecCccCC
Q 013444 204 LNADF-------HSDIAIVKINSK----TPLPAAKLGTSSKLCPGDWVVAMGCPHSL----QNTVTAGIVSCVDRKSSDL 268 (443)
Q Consensus 204 v~~d~-------~~DlAlLkl~~~----~~~~~~~l~~s~~~~~G~~V~~iG~p~~~----~~~~t~G~Vs~~~~~~~~~ 268 (443)
+..++ .+|||||+++.+ ..+.++.|.. .....|+.++++||+... ........+..+....+..
T Consensus 74 ~~~h~~~~~~~~~~DIALl~L~~~v~~~~~v~pi~L~~-~~~~~~~~~~v~GwG~~~~~~~~~~l~~~~~~~~~~~~C~~ 152 (234)
T 3s9c_A 74 YFCLNTKFPNGLDKDIMLIRLRRPVTYSTHIAPVSLPS-RSRGVGSRCRIMGWGKISTTTYPDVPHCTNIFIVKHKWCEP 152 (234)
T ss_dssp ECCSSCSSTTCGGGCCEEEEESSCCCCBTTBCCCBCCS-SCCCTTCEEEEEESSCSBTTBCCSSCEEEEEEEECGGGTTT
T ss_pred EEeCCCCCCCCCcCceEEEEECCccccCCcccccccCC-CCCCCCCeEEEEeeCCCCCCCCCccccccceEecCHHHhhh
Confidence 33343 359999999875 3455777754 445679999999997532 2234444444444444332
Q ss_pred CCC--CccceEEEE-----cccCCCCCccceeeecCCCEEEEEEEEeecC---CCeEEEEeHHHHHHHHHHHHHcC
Q 013444 269 GLG--GMRREYLQT-----DCAINAGNSGGPLVNIDGEIVGINIMKVAAA---DGLSFAVPIDSAAKIIEQFKKNG 334 (443)
Q Consensus 269 ~~~--~~~~~~i~~-----d~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~---~g~~~aIPi~~i~~~l~~l~~~g 334 (443)
.+. ......+.. ....|.|+|||||+. +++++||++++.... ..-+.+.-+...+++|++..+..
T Consensus 153 ~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPl~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~i~~~ 227 (234)
T 3s9c_A 153 LYPWVPADSRTLCAGILKGGRDTCHGDSGGPLIC-NGEMHGIVAGGSEPCGQHLKPAVYTKVFDYNNWIQSIIAGN 227 (234)
T ss_dssp TCTTSCTTSSEEEEECTTSSCBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHHTC
T ss_pred cccCCCCCcceEEeecCCCCCccCCCCCCCeEEE-eCCcEEEEEEeCCCCCCCCCCcEEEEhHHhHHHHHHHHcCC
Confidence 221 122334554 245799999999995 678999999985421 12456677888888888877654
No 45
>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus musculus} SCOP: b.47.1.2
Probab=99.50 E-value=1.4e-12 Score=121.96 Aligned_cols=177 Identities=20% Similarity=0.213 Sum_probs=112.3
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEE
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVL 204 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d---------g~~~~a~vv 204 (443)
-.|.+|.|... +...|+|.+|+++ +|||+|||+.. .+.|.+.. ++.+..+-+
T Consensus 11 ~~Pw~v~l~~~--------~~~~CgGsLI~~~-~VLTAAHC~~~----------~~~v~~G~~~~~~~~~~~~~~~v~~i 71 (225)
T 1npm_A 11 SQPWQAALFQG--------ERLICGGVLVGDR-WVLTAAHCKKQ----------KYSVRLGDHSLQSRDQPEQEIQVAQS 71 (225)
T ss_dssp SSTTEEEEEET--------TEEEEEEEEEETT-EEEECGGGCCS----------SCEEEESCSBTTC--CCCEEECEEEE
T ss_pred CcCcEEEEeeC--------CceEEEEEEECCC-EEEEhHHcCCC----------CceEEEeeeEcCCCCCCcEEEEEEEE
Confidence 35778888632 1256999999988 99999999853 22344321 344455544
Q ss_pred eecCC----------CCEEEEEEcCCC----CCCccccCCCCCCCCCCEEEEEecCCCC------CCceEEEEEEeeecC
Q 013444 205 NADFH----------SDIAIVKINSKT----PLPAAKLGTSSKLCPGDWVVAMGCPHSL------QNTVTAGIVSCVDRK 264 (443)
Q Consensus 205 ~~d~~----------~DlAlLkl~~~~----~~~~~~l~~s~~~~~G~~V~~iG~p~~~------~~~~t~G~Vs~~~~~ 264 (443)
..|+. +|||||+++.+. .+.|+.|.. .....|+.++++||.... ...+....+..+...
T Consensus 72 ~~Hp~y~~~~~~~~~~DIALl~L~~~~~~~~~v~pi~L~~-~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~ 150 (225)
T 1npm_A 72 IQHPCYNNSNPEDHSHDIMLIRLQNSANLGDKVKPVQLAN-LCPKVGQKCIISGWGTVTSPQENFPNTLNCAEVKIYSQN 150 (225)
T ss_dssp EECTTCCSSCTTCCTTCCEEEEESSCCCCSSSSCCCEECS-SCCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEECCHH
T ss_pred EECCCCCCCCccCccccEEEEeeCCcccCCCceeceECCC-CCCCCCCEEEEEeCCcccCCCCCCCccceEeEEeeecHH
Confidence 44442 499999998763 356777865 346789999999998641 123344444433322
Q ss_pred ccCCCCC-CccceEEEE----cccCCCCCccceeeecCCCEEEEEEEEeecC---CCeEEEEeHHHHHHHHHHHH
Q 013444 265 SSDLGLG-GMRREYLQT----DCAINAGNSGGPLVNIDGEIVGINIMKVAAA---DGLSFAVPIDSAAKIIEQFK 331 (443)
Q Consensus 265 ~~~~~~~-~~~~~~i~~----d~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~---~g~~~aIPi~~i~~~l~~l~ 331 (443)
.+...+. ......+.. ....|.|+|||||+. +|+++||++++.... ..-+.+.-+...+++|++..
T Consensus 151 ~C~~~~~~~~~~~~~Ca~~~~~~~~C~GDSGgPL~~-~~~l~GI~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~~ 224 (225)
T 1npm_A 151 KCERAYPGKITEGMVCAGSSNGADTCQGDSGGPLVC-DGMLQGITSWGSDPCGKPEKPGVYTKICRYTTWIKKTM 224 (225)
T ss_dssp HHHHHSTTTCCTTEEEEECTTCCBCCTTCTTCEEEE-TTEEEEEEEECCSSSCBTTBCEEEEEHHHHHHHHHHHH
T ss_pred HhhHHhCCCCCCCEEeecCCCCCeecCCCCCchheE-CCEEEEEEEeCCCCCCCCCCCeEEEEHHHHHHHHHHHh
Confidence 2211111 112334554 246899999999995 689999999974321 22455677888888887643
No 46
>1p3c_A Glutamyl-endopeptidase; serine protease, hydrolase; 1.50A {Bacillus intermedius} SCOP: b.47.1.1 PDB: 1p3e_A
Probab=99.50 E-value=1.2e-13 Score=128.12 Aligned_cols=160 Identities=16% Similarity=0.165 Sum_probs=100.3
Q ss_pred cEEEEEEEeCCCEEEeccccccCCCCCCCCCCceE----EEEeCC------CcEEEEEEEeecC--------CCCEEEEE
Q 013444 155 GIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKV----DVTLQD------GRTFEGTVLNADF--------HSDIAIVK 216 (443)
Q Consensus 155 ~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i----~V~~~d------g~~~~a~vv~~d~--------~~DlAlLk 216 (443)
..|+|++|+++ +|||+|||+.+... ..+ .|.+.. +..+..+-+..|+ .+|||||+
T Consensus 30 ~~CgGtLIs~~-~VLTAAHCv~~~~~------~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DiAll~ 102 (215)
T 1p3c_A 30 SSCTGTLIAPN-KILTNGHCVYNTAS------RSYSAKGSVYPGMNDSTAVNGSANMTEFYVPSGYINTGASQYDFAVIK 102 (215)
T ss_dssp CEEEEEEEETT-EEEECHHHHEETTT------TEECCCCEEEETCBTTBCTTCCEEEEEEECCHHHHHHCCGGGCCEEEE
T ss_pred ceEEEEEEeCC-EEEECccEeccCCC------CccccceEEEEcccCCCCCCCeEEEEEEEeCCccccCCCcccCEEEEE
Confidence 67999999987 99999999976321 222 555432 2245555555443 45999999
Q ss_pred EcCC--CCCCccccCCCCCCCCCCEEEEEecCCCC----CCceEEEEEEeeecCccCCCCCCccceEEEEcccCCCCCcc
Q 013444 217 INSK--TPLPAAKLGTSSKLCPGDWVVAMGCPHSL----QNTVTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAGNSG 290 (443)
Q Consensus 217 l~~~--~~~~~~~l~~s~~~~~G~~V~~iG~p~~~----~~~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SG 290 (443)
++.+ ..+.++.|... ....|+.++++||+... ........+..+....+ . ........|.|+||
T Consensus 103 L~~~~~~~v~pi~l~~~-~~~~g~~~~~~Gwg~~~~~~~~~~l~~~~~~~~~~~~c--------~-~~~~~~~~C~GDSG 172 (215)
T 1p3c_A 103 TDTNIGNTVGYRSIRQV-TNLTGTTIKISGYPGDKMRSTGKVSQWEMSGSVTREDT--------N-LAYYTIDTFSGNSG 172 (215)
T ss_dssp ESSCHHHHHCCCCBCCC-SCCTTCEEEEEECCHHHHHHHSSCCCEEEEEECCEECS--------S-EEEECCCCCTTCTT
T ss_pred ECCCCcccceeeecCCC-cccCCCeEEEecCCCCCcccccceechhccCccCcccc--------h-heeeccccCCCCCC
Confidence 9874 22456677543 35789999999998421 11111211211111111 1 11236678999999
Q ss_pred ceeeecCCCEEEEEEEEeecCCCeEEEEeHHHHHHHHHHHH
Q 013444 291 GPLVNIDGEIVGINIMKVAAADGLSFAVPIDSAAKIIEQFK 331 (443)
Q Consensus 291 GPlvd~~G~VVGI~s~~~~~~~g~~~aIPi~~i~~~l~~l~ 331 (443)
|||+..+|.++||++++..-...-+...-+....++|++..
T Consensus 173 gPl~~~~g~lvGi~S~g~~c~~~p~v~t~v~~~~~WI~~~~ 213 (215)
T 1p3c_A 173 SAMLDQNQQIVGVHNAGYSNGTINGGPKATAAFVEFINYAK 213 (215)
T ss_dssp CEEECTTSCEEEECCEEEGGGTEEEEEBCCHHHHHHHHHHH
T ss_pred CeeEccCCeEEEEEecccCCCccCceeEechHHHHHHHHHh
Confidence 99998789999999987642222334455666777776654
No 47
>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease, zymogen; 2.50A {Mus musculus} SCOP: b.47.1.2 PDB: 3g01_A
Probab=99.50 E-value=1.7e-12 Score=121.24 Aligned_cols=183 Identities=17% Similarity=0.137 Sum_probs=115.5
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEE
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVL 204 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d---------g~~~~a~vv 204 (443)
-.|.+|.|....... ....|+|.+|+++ +|||+|||+.. .+.|.+.. .+.+..+-+
T Consensus 11 ~~Pw~v~l~~~~~~~----~~~~CgGtLI~~~-~VLTAAHC~~~----------~~~v~~G~~~~~~~~~~~~~~~v~~~ 75 (227)
T 3fzz_A 11 SRPYMAYYEFLKVGG----KKMFCGGFLVRDK-FVLTAAHCKGR----------SMTVTLGAHNIKAKEETQQIIPVAKA 75 (227)
T ss_dssp SSTTEEEEEEECSSS----CEEEEEEEEEETT-EEEECTTCCCE----------EEEEEESCSBTTSCCTTCEEEEEEEE
T ss_pred CcCCEEEEEEEeCCC----ceeEEEEEEEeCC-EEEECcccCCC----------CcEEEEcccccCCCCCCceEEEEEEE
Confidence 357888887653221 1357999999988 99999999843 44555531 244556666
Q ss_pred eecCC-------CCEEEEEEcCCC----CCCccccCCCC-CCCCCCEEEEEecCCCC-----CCceEEEEEEeeecCccC
Q 013444 205 NADFH-------SDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPHSL-----QNTVTAGIVSCVDRKSSD 267 (443)
Q Consensus 205 ~~d~~-------~DlAlLkl~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~-----~~~~t~G~Vs~~~~~~~~ 267 (443)
..|+. +|||||+++.+. .+.|+.|.... .+..|+.+++.||.... ...+....+.......+.
T Consensus 76 ~~hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~ 155 (227)
T 3fzz_A 76 IPHPDYNPDDRSNDIMLLKLVRNAKRTRAVRPLNLPRRNAHVKPGDECYVAGWGKVTPDGEFPKTLHEVKLTVQKDQVCE 155 (227)
T ss_dssp EECTTCBTTTTBTCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESSCSSTTSCCCSBCEEEEEEBCCHHHHH
T ss_pred EECcCCCCCCCcCCEEEEEECCcCCCCCcccccCCCCcccCCCCCCEEEEEECCcccCCCCCCCeeeEEEeeeecHHHhh
Confidence 66654 599999998753 34566665432 35789999999997532 223334334333322221
Q ss_pred --CCCCCccceEEEEc-----ccCCCCCccceeeecCCCEEEEEEEEeecCCCeEEEEeHHHHHHHHHHHHH
Q 013444 268 --LGLGGMRREYLQTD-----CAINAGNSGGPLVNIDGEIVGINIMKVAAADGLSFAVPIDSAAKIIEQFKK 332 (443)
Q Consensus 268 --~~~~~~~~~~i~~d-----~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~g~~~aIPi~~i~~~l~~l~~ 332 (443)
+.........+... ...|.|+|||||+. ++.++||++++......-+.+.-+...+++|++..+
T Consensus 156 ~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~-~~~l~Gi~S~g~~c~~~p~vyt~V~~~~~WI~~~i~ 226 (227)
T 3fzz_A 156 SQFQSSYNRANEICVGDSKIKGASFEEDSGGPLVC-KRAAAGIVSYGQTDGSAPQVFTRVLSFVSWIKKTMK 226 (227)
T ss_dssp HHHTTTCCTTTEEEECCCSSCBCCTTTTTTCEEEE-TTEEEEEEEECCTTCSSSEEEEEGGGTHHHHHHHHT
T ss_pred hhhccccCCCceEEEeCCCCCCcccccCCccceEE-ecCCcEEEEECCCCCCCCeEEEEhHHhHHHHHHHHh
Confidence 00001122344442 45789999999995 679999999976433334566777777788776553
No 48
>1fxy_A Coagulation factor XA-trypsin chimera; protease, chloromethylketone, hydrolase-hydrolase I complex; HET: 0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2
Probab=99.50 E-value=8.8e-13 Score=123.60 Aligned_cols=180 Identities=18% Similarity=0.225 Sum_probs=112.6
Q ss_pred CCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEEe
Q 013444 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVLN 205 (443)
Q Consensus 135 ~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d---------g~~~~a~vv~ 205 (443)
.|.+|.|.... +...|+|.+|+++ +|||+|||+... ..+.|.+.. .+.+..+.+.
T Consensus 12 ~Pw~v~l~~~~-------~~~~CgGtLI~~~-~VLTAAHC~~~~--------~~~~V~~G~~~~~~~~~~~~~~~v~~i~ 75 (228)
T 1fxy_A 12 VPWQALLINEE-------NEGFCGGTILSEF-YILTAAHCLYQA--------KRFKVRVGDRNTEQEEGGEAVHEVEVVI 75 (228)
T ss_dssp CTTEEEEECTT-------SCEEEEEEECSSS-EEEECGGGTTSC--------SSCEEEEECSCTTTCCCCEEEEEEEEEE
T ss_pred cCcEEEEEcCC-------CCeeEEEEEeeCC-EEEECHHHCCCC--------CcEEEEECccCccccCCCcEEEEEEEEE
Confidence 57788886431 1257999999987 999999999642 233444421 1344555555
Q ss_pred ecC-------CCCEEEEEEcCCC----CCCccccCCCCCCCCCCEEEEEecCCCC------CCceEEEEEEeeecCccCC
Q 013444 206 ADF-------HSDIAIVKINSKT----PLPAAKLGTSSKLCPGDWVVAMGCPHSL------QNTVTAGIVSCVDRKSSDL 268 (443)
Q Consensus 206 ~d~-------~~DlAlLkl~~~~----~~~~~~l~~s~~~~~G~~V~~iG~p~~~------~~~~t~G~Vs~~~~~~~~~ 268 (443)
.|+ .+|||||+|+.+. .+.|+.|.. .....|+.++++||.... ...+....+..+....+..
T Consensus 76 ~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~-~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~ 154 (228)
T 1fxy_A 76 KHNRFTKETYDFDIAVLRLKTPITFRMNVAPASLPT-APPATGTKCLISGWGNTASSGADYPDELQCLDAPVLSQAKCEA 154 (228)
T ss_dssp ECTTCBTTTTBTCCEEEEESSCCCCBTTBCCCCCCS-SCCCTTCEEEEEESSCCCSSSCCCCSSCEEEEEEBCCHHHHHH
T ss_pred ECCCCCCCCCcCcEEEEEECCcccCCCceeccCCCC-CCCCCCCEEEEEecCccCCCCCCCCccceEEEEEEeCHHHhHh
Confidence 554 3699999999763 345777754 346789999999997532 1233333333333222211
Q ss_pred CCC-CccceEEEEc-----ccCCCCCccceeeecCCCEEEEEEEEeec--CCCeEEEEeHHHHHHHHHHHHH
Q 013444 269 GLG-GMRREYLQTD-----CAINAGNSGGPLVNIDGEIVGINIMKVAA--ADGLSFAVPIDSAAKIIEQFKK 332 (443)
Q Consensus 269 ~~~-~~~~~~i~~d-----~~i~~G~SGGPlvd~~G~VVGI~s~~~~~--~~g~~~aIPi~~i~~~l~~l~~ 332 (443)
.+. ......+... ...|.|+|||||+. +++++||++++..- ...-+.+.-+....++|++..+
T Consensus 155 ~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~C~~~~~p~vyt~V~~y~~WI~~~~~ 225 (228)
T 1fxy_A 155 SYPGKITSNMFCVGFLEGGKDSCQGDSGGPVVC-NGQLQGVVSWGDGCAQKNKPGVYTKVYNYVKWIKNTIA 225 (228)
T ss_dssp HSTTTCCTTEEEESCTTCSCBCCTTCTTCEEEE-TTEEEEEEEECSSSSBTTBCEEEEEGGGGHHHHHHHHH
T ss_pred hcCCCCCCCEEEeccCCCCCccccCccccceEE-CCEEEEEEEECCCCCCCCCCEEEEEhHHHHHHHHHHHh
Confidence 111 1123345542 35799999999995 68999999997531 1224556777777777776543
No 49
>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage, salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar} SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A 2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A 2eek_A
Probab=99.49 E-value=1.4e-12 Score=121.78 Aligned_cols=175 Identities=17% Similarity=0.242 Sum_probs=111.9
Q ss_pred CCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeC---------CCcEEEEEEEe
Q 013444 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQ---------DGRTFEGTVLN 205 (443)
Q Consensus 135 ~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~---------dg~~~~a~vv~ 205 (443)
.|.+|.|.. +...|+|.+|+++ +|||+|||+.. .+.|.+. ..+.+..+-+.
T Consensus 12 ~Pw~v~l~~---------~~~~CgGsLIs~~-~VLTAAHC~~~----------~~~v~~G~~~~~~~~~~~~~~~v~~i~ 71 (222)
T 1hj8_A 12 QPHQVSLNS---------GYHFCGGSLVNEN-WVVSAAHCYKS----------RVEVRLGEHNIKVTEGSEQFISSSRVI 71 (222)
T ss_dssp CTTEEEEES---------SSEEEEEEEEETT-EEEECGGGCCS----------SCEEEESCSBTTSCCSCCEEEEEEEEE
T ss_pred CCEEEEEEc---------CCcEEEeEEecCC-EEEECHHhcCC----------CeEEEEcccccccCCCCcEEEEEEEEE
Confidence 578888852 1257999999988 99999999963 2233332 23445555555
Q ss_pred ecC-------CCCEEEEEEcCCC----CCCccccCCCCCCCCCCEEEEEecCCCCC-----CceEEEEEEeeecCccCCC
Q 013444 206 ADF-------HSDIAIVKINSKT----PLPAAKLGTSSKLCPGDWVVAMGCPHSLQ-----NTVTAGIVSCVDRKSSDLG 269 (443)
Q Consensus 206 ~d~-------~~DlAlLkl~~~~----~~~~~~l~~s~~~~~G~~V~~iG~p~~~~-----~~~t~G~Vs~~~~~~~~~~ 269 (443)
.|+ .+|||||+++.+. .+.|+.|.. ..+..|+.++++||+.... ..+....+..+....+...
T Consensus 72 ~Hp~y~~~~~~~DIALl~L~~~~~~~~~v~picL~~-~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~ 150 (222)
T 1hj8_A 72 RHPNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPT-SCAPAGTMCTVSGWGNTMSSTADSNKLQCLNIPILSYSDCNNS 150 (222)
T ss_dssp ECTTCBTTTTBSCCEEEEESSCCCCSSSCCCCBCCS-SCCCTTCEEEEEESSCCCCSSCCTTBCEEEEEEBCCHHHHHHH
T ss_pred ECCCCCCCCCCCcEEEEEECCcccCCCceeccCCCC-CCCCCCCEEEEEECCCCCCCCCCCceeEEEEEEEcCHHHhhhh
Confidence 555 3699999998763 356777754 3567899999999986422 2333333333322222111
Q ss_pred CC-CccceEEEEc-----ccCCCCCccceeeecCCCEEEEEEEEeecC--CCeEEEEeHHHHHHHHHHHH
Q 013444 270 LG-GMRREYLQTD-----CAINAGNSGGPLVNIDGEIVGINIMKVAAA--DGLSFAVPIDSAAKIIEQFK 331 (443)
Q Consensus 270 ~~-~~~~~~i~~d-----~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~--~g~~~aIPi~~i~~~l~~l~ 331 (443)
+. ......+... ...|.|+|||||+. +|+++||++++..-. ..-+.+.-+...+++|++..
T Consensus 151 ~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~C~~~~~p~vyt~v~~~~~WI~~~~ 219 (222)
T 1hj8_A 151 YPGMITNAMFCAGYLEGGKDSCQGDSGGPVVC-NGELQGVVSWGYGCAEPGNPGVYAKVCIFNDWLTSTM 219 (222)
T ss_dssp STTCCCTTEEEESCTTSSCBCCTTCTTCEEEE-TTEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHH
T ss_pred ccCCCCCCeEEeccCCCCCccCCCCcccceEE-CCEEEEEEeecCCCCCCCcCcEEEEhHHhHHHHHHHh
Confidence 11 1123345543 35799999999995 789999999975311 22455677777778877654
No 50
>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A, LUNG; chymotrypsin homology, hormone/growth factor complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A
Probab=99.49 E-value=4.7e-12 Score=119.47 Aligned_cols=186 Identities=15% Similarity=0.120 Sum_probs=119.0
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC-----------CcEEEEE
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD-----------GRTFEGT 202 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d-----------g~~~~a~ 202 (443)
-.|.+|.|... +...|+|.+|+++ +|||+|||+.+.. ...+.|.+.. .+.+...
T Consensus 10 ~~Pw~v~l~~~--------~~~~CgGtLIs~~-~VLTAAHC~~~~~------~~~~~v~~G~~~~~~~~~~~~~~~~~v~ 74 (240)
T 1si5_H 10 NIGWMVSLRYR--------NKHICGGSLIKES-WVLTARQCFPSRD------LKDYEAWLGIHDVHGRGDEKCKQVLNVS 74 (240)
T ss_dssp CCTTEEEEEES--------SSEEEEEEEEETT-EEEEEGGGCSSSC------GGGEEEEESCSBSSCSTTTTTCEEEEEE
T ss_pred CCCeEEEEEeC--------CCeEEEEEEeeCC-EEEEhHHhcCCCC------CccEEEEEeeeecCCCCCCCcceEEEEE
Confidence 35788888753 1367999999988 9999999997532 2356666532 2334444
Q ss_pred EEeecC-CCCEEEEEEcCCC----CCCccccCCC-CCCCCCCEEEEEecCCCCC----CceEEEEEEeeecCccCCCCCC
Q 013444 203 VLNADF-HSDIAIVKINSKT----PLPAAKLGTS-SKLCPGDWVVAMGCPHSLQ----NTVTAGIVSCVDRKSSDLGLGG 272 (443)
Q Consensus 203 vv~~d~-~~DlAlLkl~~~~----~~~~~~l~~s-~~~~~G~~V~~iG~p~~~~----~~~t~G~Vs~~~~~~~~~~~~~ 272 (443)
-+.+++ .+|||||+++.+. .+.++.|... ..+..|+.++++||..... ..+....+..+....+...+..
T Consensus 75 ~~~~~p~~~DiALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~ 154 (240)
T 1si5_H 75 QLVYGPEGSDLVLMKLARPAVLDDFVSTIDLPNYGSTIPEKTSCSVYGWGYTGLINYDGLLRVAHLYIMGNEKCSQHHRG 154 (240)
T ss_dssp EEEECSSTTCEEEEEESSCCCCSSSCCCCBCCCTTCCCCTTCEEEEEESSCCCCSSCCCBCEEEEEEEECGGGTCC----
T ss_pred EEEcCCCCCcEEEEEECCccccCCceeccCcCCcCCCCCCCCEEEEEEeCCCCCCCCCCeeEEEEEeecCHHHhhhhhcC
Confidence 444554 6899999998763 3556777543 3456899999999976432 2344444444444443321111
Q ss_pred ---ccceEEEE-----cccCCCCCccceeeecCC---CEEEEEEEEeecC--CCeEEEEeHHHHHHHHHHHHHcC
Q 013444 273 ---MRREYLQT-----DCAINAGNSGGPLVNIDG---EIVGINIMKVAAA--DGLSFAVPIDSAAKIIEQFKKNG 334 (443)
Q Consensus 273 ---~~~~~i~~-----d~~i~~G~SGGPlvd~~G---~VVGI~s~~~~~~--~g~~~aIPi~~i~~~l~~l~~~g 334 (443)
.....+.. ....|.|+|||||+-.++ .++||++++..-. ..-+.+.-+...+++|++..+..
T Consensus 155 ~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~y~~WI~~~i~~~ 229 (240)
T 1si5_H 155 KVTLNESEICAGAEKIGSGPCEGDYGGPLVCEQHKMRMVLGVIVPGRGCAIPNRPGIFVRVAYYAKWIHKIILTY 229 (240)
T ss_dssp ---CCTTEEEEECSSSCCBCCTTCTTCEEEEECSSSEEEEEEECSCSCSSCTTCCEEEEEGGGGHHHHHHHHSSC
T ss_pred CccCCCCEEeecCCCCCCEeccCCCCCcEEEEECCcEEEEEEEEECCCCCCCCCCcEEEEHHHHHHHHHHHHhcc
Confidence 12234444 246799999999995443 7999999875311 23456677888888888876543
No 51
>2xw9_A Complement factor D; immune system, hydrolase, serine protease, alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB: 2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A 1fdp_A 2xwa_A 1dst_A 4d9q_A
Probab=99.49 E-value=1.9e-12 Score=121.05 Aligned_cols=182 Identities=18% Similarity=0.278 Sum_probs=114.1
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEE
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVL 204 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d---------g~~~~a~vv 204 (443)
-.|.+|.|.... ...|+|.+|+++ +|||+|||+.+.. ...+.|.+.. .+.+...-+
T Consensus 11 ~~Pw~v~l~~~~--------~~~CgGtLIs~~-~VLTAAHC~~~~~------~~~~~v~~G~~~~~~~~~~~~~~~v~~i 75 (228)
T 2xw9_A 11 ARPYMASVQLNG--------AHLCGGVLVAEQ-WVLSAAHCLEDAA------DGKVQVLLGAHSLSQPEPSKRLYDVLRA 75 (228)
T ss_dssp SCTTEEEEEETT--------EEEEEEEEEETT-EEEECGGGGSSCT------TCCEEEEESCSBSSSCCTTCEEEEEEEE
T ss_pred CCCcEEEEEECC--------CeEEEEEEEeCC-EEEEcHHhCCCCC------CCceEEEEcccccCCCCCcceEEEEEEE
Confidence 357888887432 256999999988 9999999997532 2356666542 244555555
Q ss_pred eecC-------CCCEEEEEEcCCC----CCCccccCCC-CCCCCCCEEEEEecCCCCC-----CceEEEEEEeeecCccC
Q 013444 205 NADF-------HSDIAIVKINSKT----PLPAAKLGTS-SKLCPGDWVVAMGCPHSLQ-----NTVTAGIVSCVDRKSSD 267 (443)
Q Consensus 205 ~~d~-------~~DlAlLkl~~~~----~~~~~~l~~s-~~~~~G~~V~~iG~p~~~~-----~~~t~G~Vs~~~~~~~~ 267 (443)
..|+ .+|||||+++.+. .+.|+.|... ..+..|+.++++||..... ..+....+.-+....+.
T Consensus 76 ~~hp~y~~~~~~~DIAll~L~~~~~~~~~v~pi~l~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~ 155 (228)
T 2xw9_A 76 VPHPDSQPDTIDHDLLLLQLSEKATLGPAVRPLPWQRVDRDVAPGTLCDVAGWGIVNHAGRRPDSLQHVLLPVLDRATCN 155 (228)
T ss_dssp EECTTCCTTCCTTCCEEEEESSCCCCBTTBCCCCBCCSCCCCCTTC-CEEEESSCCSTTCCCCSBCEEEECCEECHHHHT
T ss_pred EeCCCCCCCCCCCcEEEEEeCCCcccCCCeeecccCCcccCCCCCCEEEEEEecccCCCCCCCchheEEEEEEcChhHhc
Confidence 5555 3699999998763 3456666542 3467899999999975422 22333333333222222
Q ss_pred CCC---CCccceEEEEc---ccCCCCCccceeeecCCCEEEEEEEEeecC---CCeEEEEeHHHHHHHHHHHH
Q 013444 268 LGL---GGMRREYLQTD---CAINAGNSGGPLVNIDGEIVGINIMKVAAA---DGLSFAVPIDSAAKIIEQFK 331 (443)
Q Consensus 268 ~~~---~~~~~~~i~~d---~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~---~g~~~aIPi~~i~~~l~~l~ 331 (443)
..+ .......+... ...|.|+|||||+. +|.++||++++.... ..-+.+.-+...+++|++..
T Consensus 156 ~~~~~~~~~~~~~~Ca~~~~~~~C~GDsGgPL~~-~~~l~Gi~s~g~~~C~~~~~p~vyt~V~~~~~WI~~~i 227 (228)
T 2xw9_A 156 RRTHHDGAITERLMCAESNRRDSCKGDAGGPLVC-GGVLEGVVTSGSRVCGNRKKPGIYTRVASYAAWIDSVL 227 (228)
T ss_dssp STTTTTTCCCTTEEEECCSSCBCCTTCTTCEEEE-TTEEEEEECCSCCCSSCTTSCEEEEEGGGGHHHHHHHH
T ss_pred CccccCCcccCCEEecCCCCCccCCCCCcccEEE-CCEEEEEEeecCCcCCCCCCCcEEEEHHHHHHHHHHHh
Confidence 111 11123344442 46799999999996 689999999875221 22455677777777777653
No 52
>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation, pyroglutamation, eight-membered R peptide bond, hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida}
Probab=99.49 E-value=3.7e-12 Score=119.81 Aligned_cols=185 Identities=15% Similarity=0.126 Sum_probs=117.0
Q ss_pred CCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEEe
Q 013444 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVLN 205 (443)
Q Consensus 135 ~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d---------g~~~~a~vv~ 205 (443)
.|.+|.|.... .....|+|.+|+++ +|||+|||+.+.. ...+.|.+.. .+.+..+-+.
T Consensus 12 ~Pw~v~l~~~~------~~~~~CgGtLIs~~-~VLTAAHC~~~~~------~~~~~v~~G~~~~~~~~~~~~~~~v~~i~ 78 (238)
T 1ym0_A 12 FPWQVSVRRKS------SDSHFCGGSIINDR-WVVCAAHCMQGEA------PALVSLVVGEHDSSAASTVRQTHDVDSIF 78 (238)
T ss_dssp STTEEEEEEGG------GTEEEEEEEEEETT-EEEECHHHHTTCC------GGGEEEEESCSBTTSCCSSCEEEEEEEEE
T ss_pred cCCEEEEEeCC------CCceEEEEEEeeCC-EEEECHHhCCCCC------CceEEEEEcccccCCCCCCceEEEEEEEE
Confidence 57888887542 11367999999988 9999999997631 2456666542 2455555555
Q ss_pred ecC-------CCCEEEEEEcCCC----CCCccccCCCCCCCCCCEEEEEecCCCC------CCceEEEEEEeeecCccC-
Q 013444 206 ADF-------HSDIAIVKINSKT----PLPAAKLGTSSKLCPGDWVVAMGCPHSL------QNTVTAGIVSCVDRKSSD- 267 (443)
Q Consensus 206 ~d~-------~~DlAlLkl~~~~----~~~~~~l~~s~~~~~G~~V~~iG~p~~~------~~~~t~G~Vs~~~~~~~~- 267 (443)
.|+ .+|||||+++.+. .+.|+.|........++.+.++||.... ...+....+.-+....+.
T Consensus 79 ~hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~ 158 (238)
T 1ym0_A 79 VNENYDPATLENDVSVIKTAVAITFDINVGPICAPDPANDYVYRKSQCSGWGTINSGGVCCPAVLRYVTLNITTNAFCDA 158 (238)
T ss_dssp ECTTCCTTTCTTCCEEEEESSCCCCSSSCCCCBCCCTTCCCTTCEEEEEESCCSSTTCCSCCSBCEEEEEEECCHHHHHH
T ss_pred ECCCCCCCCCcccEEEEEeCCCccccCcccccCCCCCcCCCCCCceEEEeecCCCCCCCcCCccceEEEEEeeCHHHHhH
Confidence 554 4699999998763 3567777554332378999999997642 222333333333322221
Q ss_pred -CCCCCccceEEEEc-------ccCCCCCccceeeecC--C--CEEEEEEEEeecC-CCeEEEEeHHHHHHHHHHHHH
Q 013444 268 -LGLGGMRREYLQTD-------CAINAGNSGGPLVNID--G--EIVGINIMKVAAA-DGLSFAVPIDSAAKIIEQFKK 332 (443)
Q Consensus 268 -~~~~~~~~~~i~~d-------~~i~~G~SGGPlvd~~--G--~VVGI~s~~~~~~-~g~~~aIPi~~i~~~l~~l~~ 332 (443)
+.........+... ...|.|+|||||+-.+ | .++||++++..-. ..-+.+.-+....++|++..+
T Consensus 159 ~~~~~~~~~~~~Ca~~~~~~~~~~~C~GDsGgPL~~~~~~~~~~l~Gi~S~g~~C~~~~p~vyt~v~~~~~WI~~~i~ 236 (238)
T 1ym0_A 159 VYTSDTIYDDMICATDNTGMTDRDSCQGDSGGPLSVKDGSGIFSLVGIVSWGIGCASGYPGVYSRVGFHAGWITDTIT 236 (238)
T ss_dssp HCTTSCCCTTEEEEECSSCSSSCBCCTTTTTCEEEEECTTCCEEEEEEEEECSSSSSSSCEEEEEHHHHHHHHHHHHH
T ss_pred hhcccccCCCeEEecCCCCCCcCccCCCccCCeeEEECCCCCEEEEEEEeECCCCCCCCCcEEEEHHHhHHHHHHHhc
Confidence 11001123345442 4689999999998543 4 6999999875311 224566788888888877654
No 53
>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor complex, serine proteinase, benzamidine phosphonate, serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens} SCOP: b.47.1.2 PDB: 3bn9_B* 3nps_A 3so3_A* 1eax_A 1eaw_A 2gv6_A* 2gv7_A* 3p8g_A* 3p8f_A*
Probab=99.48 E-value=1.6e-12 Score=122.34 Aligned_cols=189 Identities=17% Similarity=0.190 Sum_probs=114.8
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeC----------CCcEEEEEE
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQ----------DGRTFEGTV 203 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~----------dg~~~~a~v 203 (443)
-.|.+|.|..... ...|+|.+|+++ +|||+|||+.+...........+.|.+. ..+.+..+-
T Consensus 11 ~~Pw~v~l~~~~~-------~~~CgGtLI~~~-~VLTAAhC~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~v~~ 82 (241)
T 3ncl_A 11 EWPWQVSLHALGQ-------GHICGASLISPN-WLVSAAHCYIDDRGFRYSDPTQWTAFLGLHDQSQRSAPGVQERRLKR 82 (241)
T ss_dssp SSTTEEEEEETTT-------EEEEEEEECSSS-EEEECGGGGCCBTTBCTTCGGGEEEEESCSBTTCTTSTTCEEEEEEE
T ss_pred CCCcEEEEEcCCC-------ceEEEEEEeeCC-EEEEcHHhcccCCCccccCCceEEEEEeccccccCCCCCceEEEEEE
Confidence 3578888865321 256999999988 9999999997532211222345566553 124556666
Q ss_pred EeecC-------CCCEEEEEEcCCC----CCCccccCCCC-CCCCCCEEEEEecCCCCC-----CceEEEEEEeeecCcc
Q 013444 204 LNADF-------HSDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPHSLQ-----NTVTAGIVSCVDRKSS 266 (443)
Q Consensus 204 v~~d~-------~~DlAlLkl~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~~-----~~~t~G~Vs~~~~~~~ 266 (443)
+..|+ .+|||||+|+.+. .+.++.|.... .+..|+.+++.||..... ..+....+..+....+
T Consensus 83 i~~hp~y~~~~~~~DIALl~L~~~~~~~~~v~piclp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C 162 (241)
T 3ncl_A 83 IISHPFFNDFTFDYDIALLELEKPAEYSSMVRPISLPDASHVFPAGKAIWVTGWGHTQYGGTGALILQKGEIRVINQTTC 162 (241)
T ss_dssp EEECTTCCTTTCTTCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSSTTSCBCSBCEEEEEEECCHHHH
T ss_pred EEECCCCCCCCCCCcEEEEEECCCCcccCccCceEcCCcccCCCCCCEEEEEEecccCCCCCcCceeeEEeEEEECHHHh
Confidence 66665 4699999998753 34567775432 356799999999975321 2233333433332222
Q ss_pred CCCCC-CccceEEEE-----cccCCCCCccceeee--cCCC--EEEEEEEEeecC--CCeEEEEeHHHHHHHHHHH
Q 013444 267 DLGLG-GMRREYLQT-----DCAINAGNSGGPLVN--IDGE--IVGINIMKVAAA--DGLSFAVPIDSAAKIIEQF 330 (443)
Q Consensus 267 ~~~~~-~~~~~~i~~-----d~~i~~G~SGGPlvd--~~G~--VVGI~s~~~~~~--~g~~~aIPi~~i~~~l~~l 330 (443)
...+. ......+.. ....|.|+|||||+- .+|+ ++||++++..-. ..-+.+.-+...+++|++.
T Consensus 163 ~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~g~~~l~Gi~S~g~~c~~~~~p~vyt~v~~y~~WI~~~ 238 (241)
T 3ncl_A 163 ENLLPQQITPRMMCVGFLSGGVDSCQGDSGGPLSSVEADGRIFQAGVVSWGDGCAQRNKPGVYTRLPLFRDWIKEN 238 (241)
T ss_dssp HHHSTTTCCTTEEEEECTTCSSBCCTTCTTCEEEEECTTSCEEEEEEEEECSSSSCTTCCEEEEESGGGHHHHHHH
T ss_pred hhhcccCCCCCeEEeCCCCCCCccCCCcCCCCEEEEcCCCcEEEEEEEEECCCCCCCCCCeEEEEHHHHHHHHHHH
Confidence 11111 112234444 235799999999983 3565 889999875321 2234556667777777654
No 54
>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease, inhibitor, complex, protease-substrate interactions, collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2
Probab=99.48 E-value=8.3e-13 Score=123.67 Aligned_cols=179 Identities=21% Similarity=0.234 Sum_probs=112.7
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEE
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVL 204 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d---------g~~~~a~vv 204 (443)
-.|.+|.|... +...|+|.+|+++ +|||+|||+.+. ..+.|.+.. ...+..+-+
T Consensus 11 ~~Pw~v~l~~~--------~~~~CgGtLI~~~-~VLTAAHC~~~~--------~~~~v~~G~~~~~~~~~~~~~~~v~~i 73 (226)
T 1azz_A 11 SWPHQAALFID--------DMYFCGGSLISPE-WILTAAHCMDGA--------GFVDVVLGAHNIREDEATQVTIQSTDF 73 (226)
T ss_dssp SSTTEEEEEET--------TTEEEEEEEEETT-EEEECHHHHTTC--------SCEEEEESCSBSSSCCTTCEEEEECCE
T ss_pred CcCCEEEEEEC--------CcEEEEEEEecCC-EEEEhHHhcCCC--------CceEEEEcceEcCCCCCccEEEEEEEE
Confidence 35788888751 2367999999987 999999999762 345565532 234444444
Q ss_pred eecC-------CCCEEEEEEcCCC----CCCccccCCCCCCCCCCEEEEEecCCCCC------CceEEEEEEeeecCccC
Q 013444 205 NADF-------HSDIAIVKINSKT----PLPAAKLGTSSKLCPGDWVVAMGCPHSLQ------NTVTAGIVSCVDRKSSD 267 (443)
Q Consensus 205 ~~d~-------~~DlAlLkl~~~~----~~~~~~l~~s~~~~~G~~V~~iG~p~~~~------~~~t~G~Vs~~~~~~~~ 267 (443)
..|+ .+|||||+++.+. .+.++.|.... ...|+.+++.||..... ..+....+.-+....+.
T Consensus 74 ~~hp~y~~~~~~~DiALl~L~~~~~~~~~v~picL~~~~-~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~C~ 152 (226)
T 1azz_A 74 TVHENYNSFVISNDIAVIRLPVPVTLTAAIATVGLPSTD-VGVGTVVTPTGWGLPSDSALGISDVLRQVDVPIMSNADCD 152 (226)
T ss_dssp EECTTCBTTTTBSCCEEEECSSCCCCCSSSCCCBCCSSC-CCTTCEEEEEESSCSSTTCSSSCSBCEECCEEEECHHHHH
T ss_pred EECCCCCCCCCCCceEEEEECCccccCCCcccccCCCCC-CCCCCEEEEEeCCccCCCCCCCCchhEEeeEEEEChhHhh
Confidence 4554 3699999998763 35677775533 47899999999975322 22333333323222221
Q ss_pred CCCCCccceEEEEc----ccCCCCCccceeeecCCCEEEEEEEEee-c--CCCeEEEEeHHHHHHHHHHHH
Q 013444 268 LGLGGMRREYLQTD----CAINAGNSGGPLVNIDGEIVGINIMKVA-A--ADGLSFAVPIDSAAKIIEQFK 331 (443)
Q Consensus 268 ~~~~~~~~~~i~~d----~~i~~G~SGGPlvd~~G~VVGI~s~~~~-~--~~g~~~aIPi~~i~~~l~~l~ 331 (443)
..+.......+... ...|.|+|||||+ .+|.++||++++.. . ...-+.+.-+...++++++..
T Consensus 153 ~~~~~~~~~~~Ca~~~~~~~~C~GDSGgPL~-~~~~l~Gi~S~g~~~~C~~~~p~vyt~V~~~~~WI~~~~ 222 (226)
T 1azz_A 153 AVYGIVTDGNICIDSTGGKGTCNGDSGGPLN-YNGLTYGITSFGAAAGCEAGYPDAFTRVTYFLDWIQTQT 222 (226)
T ss_dssp HHHSCCCTTEEEECCTTTCBCCTTCTTCEEE-ETTEEEEEEEEEETTCTTSCCCEEEEESGGGHHHHHHHH
T ss_pred hhhCcCCCceEeecCCCCCccCCCCCCcceE-ECCEEEEEEEEECCCCCCCCCCCEEEEHHHHHHHHHHHh
Confidence 10111122344442 3579999999999 57899999999863 1 122345566777777777654
No 55
>2zch_P Prostate-specific antigen; human PSA, kallikrein related peptidases, antibodies, prostate cancer, glycoprotein, hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens} PDB: 2zck_P* 2zcl_P* 3qum_P*
Probab=99.48 E-value=2.1e-12 Score=121.54 Aligned_cols=179 Identities=18% Similarity=0.215 Sum_probs=113.0
Q ss_pred CCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEe-------CCCcEEEEEEEeec
Q 013444 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTL-------QDGRTFEGTVLNAD 207 (443)
Q Consensus 135 ~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~-------~dg~~~~a~vv~~d 207 (443)
.|.+|.|... +...|+|.+|+++ +|||+|||+.+. ..+.+-. ..++.+..+-+..|
T Consensus 12 ~Pw~v~l~~~--------~~~~CgGsLIs~~-~VLTAAHC~~~~--------~~v~~G~~~~~~~~~~~~~~~v~~~~~H 74 (237)
T 2zch_P 12 QPWQVLVASR--------GRAVCGGVLVHPQ-WVLTAAHCIRNK--------SVILLGRHSLFHPEDTGQVFQVSHSFPH 74 (237)
T ss_dssp CTTEEEEESS--------SSEEEEEEEEETT-EEEECGGGCCSS--------CEEEESCSBSSSCCTTCEEEEEEEEEEC
T ss_pred CCCEEEEeeC--------CCeEEEEEEecCC-EEEEcHHhcCCC--------ceEEEecccccCCCCCcEEEEEEEEecC
Confidence 5778888632 2367999999988 999999999752 1222211 12345555555555
Q ss_pred C------------------CCCEEEEEEcCCC----CCCccccCCCCCCCCCCEEEEEecCCCC------CCceEEEEEE
Q 013444 208 F------------------HSDIAIVKINSKT----PLPAAKLGTSSKLCPGDWVVAMGCPHSL------QNTVTAGIVS 259 (443)
Q Consensus 208 ~------------------~~DlAlLkl~~~~----~~~~~~l~~s~~~~~G~~V~~iG~p~~~------~~~~t~G~Vs 259 (443)
+ .+|||||+++.+. .+.++.|.. .....|+.++++||.... ...+....+.
T Consensus 75 p~y~~~~~~~~~~~~~~~~~~DIALl~L~~~~~~~~~v~pi~Lp~-~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~ 153 (237)
T 2zch_P 75 PLYDMSLLKNRFLRPGDDSSHDLMLLRLSEPAELTDAVKVMDLPT-QEPALGTTCYASGWGSIEPEEFLTPKKLQCVDLH 153 (237)
T ss_dssp TTSCGGGGTSSSCCTTCBCTTCCEEEEESSCCCCCSSCCCCCCCS-SCCCTTCEEEEEESCCSSSSSCCCCSBCEEEEEE
T ss_pred CCcchhhhcccccccCCCCCcceEEEEeCCCCccCCcEeeeECCC-CCCCCCCEEEEEeCCccCCCCCcCCcccEEeEEE
Confidence 4 4699999998762 356777755 456789999999997632 1223333333
Q ss_pred eeecCccCCCCC-CccceEEEEc-----ccCCCCCccceeeecCCCEEEEEEEEeecC---CCeEEEEeHHHHHHHHHHH
Q 013444 260 CVDRKSSDLGLG-GMRREYLQTD-----CAINAGNSGGPLVNIDGEIVGINIMKVAAA---DGLSFAVPIDSAAKIIEQF 330 (443)
Q Consensus 260 ~~~~~~~~~~~~-~~~~~~i~~d-----~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~---~g~~~aIPi~~i~~~l~~l 330 (443)
.+....+...+. .....++... ...|.|+|||||+. ++.++||++++.... ..-+.+.-+...+++|++.
T Consensus 154 ~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~ 232 (237)
T 2zch_P 154 VISNDVCAQVHPQKVTKFMLCAGRWTGGKSTCSGDSGGPLVC-NGVLQGITSWGSEPCALPERPSLYTKVVHYRKWIKDT 232 (237)
T ss_dssp EECHHHHHHHCSSBCCTTEEEEECTTCSCBCCTTCTTCEEES-SSSEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHH
T ss_pred EeCHHHhcccccCCCCceEEeecCCCCCCcccCCCccCeEEE-CCEEEEEEEeCcCCCCCCCCCcEEEEHHHHHHHHHHH
Confidence 333222211010 1122345442 46799999999994 689999999976321 2245567777788888776
Q ss_pred HH
Q 013444 331 KK 332 (443)
Q Consensus 331 ~~ 332 (443)
.+
T Consensus 233 i~ 234 (237)
T 2zch_P 233 IV 234 (237)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 56
>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase; 2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A
Probab=99.48 E-value=3.3e-12 Score=120.42 Aligned_cols=182 Identities=18% Similarity=0.206 Sum_probs=114.6
Q ss_pred CCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEEe
Q 013444 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVLN 205 (443)
Q Consensus 135 ~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d---------g~~~~a~vv~ 205 (443)
.|.+|.|... +...|+|.+|+++ ||||+|||+..... ...+.|.+.. .+.+..+.+.
T Consensus 14 ~Pw~v~l~~~--------~~~~CgGtLIs~~-~VLTAAHC~~~~~~-----~~~~~v~~G~~~~~~~~~~~~~~~v~~i~ 79 (240)
T 1mza_A 14 RPFMASIQYG--------GHHVCGGVLIDPQ-WVLTAAHCQYRFTK-----GQSPTVVLGAHSLSKNEASKQTLEIKKFI 79 (240)
T ss_dssp STTEEEEEET--------TEEEEEEEEEETT-EEEECGGGSCTTCS-----CSCEEEEESCSBSSSCCTTCEEEEEEEEE
T ss_pred CCeEEEEeeC--------CceEEEEEEecCC-EEEECHHhCCCCCC-----CCCeEEEeCceecCCCCCceEEEEEEEEE
Confidence 5788888742 1367999999987 99999999864211 1345565532 2445555555
Q ss_pred ecC-------CCCEEEEEEcCCC----CCCccccCCCCCCCCCCEEEEEecCCCC------CCceEEEEEEeeecCccC-
Q 013444 206 ADF-------HSDIAIVKINSKT----PLPAAKLGTSSKLCPGDWVVAMGCPHSL------QNTVTAGIVSCVDRKSSD- 267 (443)
Q Consensus 206 ~d~-------~~DlAlLkl~~~~----~~~~~~l~~s~~~~~G~~V~~iG~p~~~------~~~~t~G~Vs~~~~~~~~- 267 (443)
.|+ .+|||||+|+.+. .+.++.|.....+..|+.++++||.... ...+....+..+....+.
T Consensus 80 ~hp~y~~~~~~~DIALl~L~~~~~~~~~v~pi~l~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~C~~ 159 (240)
T 1mza_A 80 PFSRVTSDPQSNDIMLVKLQTAAKLNKHVKMLHIRSKTSLRSGTKCKVTGWGATDPDSLRPSDTLREVTVTVLSRKLCNS 159 (240)
T ss_dssp ECCCSSCSSSSSCCEEEEESSCCCCBTTBCCCCBCSSCCCCTTCEEEEEECCCSSTTCSSCCSBCEEEEEEECCHHHHTS
T ss_pred eCCCccCCCCCceEEEEEeCCCcccCCceeeeecCCcccCCCCCEEEEEeCCcCCCCCCCccccceEeEEEEeCHHHcCC
Confidence 554 3699999998763 3557777654566789999999997532 223444444444333332
Q ss_pred -CCCC---CccceEEEEc-----ccCCCCCccceeeecCCCEEEEEEEEeecC--CCeEEEEeHHH-HHHHHHHHH
Q 013444 268 -LGLG---GMRREYLQTD-----CAINAGNSGGPLVNIDGEIVGINIMKVAAA--DGLSFAVPIDS-AAKIIEQFK 331 (443)
Q Consensus 268 -~~~~---~~~~~~i~~d-----~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~--~g~~~aIPi~~-i~~~l~~l~ 331 (443)
..+. ......+... ...|.|+|||||+- +|.++||++++..=. ..-+.+.-+.. .+++|++..
T Consensus 160 ~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGGPL~~-~~~l~Gi~S~g~~C~~~~~p~vyt~v~~~y~~WI~~~~ 234 (240)
T 1mza_A 160 QSYYNGDPFITKDMVCAGDAKGQKDSCKGDAGGPLIC-KGVFHAIVSGGHECGVATKPGIYTLLTKKYQTWIKSNL 234 (240)
T ss_dssp TTTTTTTTCCCTTEEEEECTTSCCCCCTTCTTCEEEE-TTEEEEEECSSCCSSCTTCCEEEEECCHHHHHHHHHHT
T ss_pred cceeCCCCcCCCCeEeecCCCCCCccCCCCCCCeeEE-CCEEEEEEEECCCCCCCCCCcEEEeChHHHHHHHHHhc
Confidence 1111 1223445542 46799999999995 689999999875311 12344455555 777776654
No 57
>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=99.48 E-value=1.7e-12 Score=121.25 Aligned_cols=177 Identities=17% Similarity=0.236 Sum_probs=111.9
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeC---------CCcEEEEEEE
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQ---------DGRTFEGTVL 204 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~---------dg~~~~a~vv 204 (443)
-.|.+|.|. . +...|+|.+|+++ +|||+|||+.. .+.|.+. +++.+..+-+
T Consensus 11 ~~Pw~v~l~--~-------~~~~CgGsLIs~~-~VLTAAHC~~~----------~~~v~~G~~~~~~~~~~~~~~~v~~i 70 (223)
T 3mfj_A 11 TVPYQVSLN--S-------GYHFCGGSLINSQ-WVVSAAHCYKS----------GIQVRLGEDNINVVEGNEQFISASKS 70 (223)
T ss_dssp SSTTEEEEE--S-------SSEEEEEEEEETT-EEEECGGGCCS----------SCEEEESCSSTTSCCSCCEEEEEEEE
T ss_pred cCCEEEEEE--c-------CCeEEEEEEecCC-EEEEhHHhcCC----------CcEEEECCceecccCCCcEEEEeeEE
Confidence 357888883 1 1266999999988 99999999942 2234332 2344555555
Q ss_pred eecC-------CCCEEEEEEcCCC----CCCccccCCCCCCCCCCEEEEEecCCCC------CCceEEEEEEeeecCccC
Q 013444 205 NADF-------HSDIAIVKINSKT----PLPAAKLGTSSKLCPGDWVVAMGCPHSL------QNTVTAGIVSCVDRKSSD 267 (443)
Q Consensus 205 ~~d~-------~~DlAlLkl~~~~----~~~~~~l~~s~~~~~G~~V~~iG~p~~~------~~~~t~G~Vs~~~~~~~~ 267 (443)
..|+ .+|||||+++.+. .+.|+.|... ....|+.++++||.... ...+....+.-+....+.
T Consensus 71 ~~Hp~y~~~~~~~DIALl~L~~~~~~~~~v~picL~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~ 149 (223)
T 3mfj_A 71 IVHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTS-CASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCK 149 (223)
T ss_dssp EECTTCCTTTCTTCCEEEEESSCCCCBTTBCCCBCCSS-CCCTTCEEEEEESSCCCSSSCCCCSSCEEEEEEBCCHHHHH
T ss_pred EECCCCCCCCCCCCEEEEEeCCCcccCCcEeeeECCCC-CCCCCCEEEEEeeeccCCCCCcccchheEEEEEEeCHHHhh
Confidence 5554 3699999998763 3567777553 45789999999997642 122333334333322221
Q ss_pred CCCC-CccceEEEEc-----ccCCCCCccceeeecCCCEEEEEEEEeec--CCCeEEEEeHHHHHHHHHHHHH
Q 013444 268 LGLG-GMRREYLQTD-----CAINAGNSGGPLVNIDGEIVGINIMKVAA--ADGLSFAVPIDSAAKIIEQFKK 332 (443)
Q Consensus 268 ~~~~-~~~~~~i~~d-----~~i~~G~SGGPlvd~~G~VVGI~s~~~~~--~~g~~~aIPi~~i~~~l~~l~~ 332 (443)
..+. ......+... ...|.|+|||||+. +|+++||++++..- ...-+.+.-+...++++++..+
T Consensus 150 ~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~i~ 221 (223)
T 3mfj_A 150 SAYPGQITSNMFCAGYLEGGKDSCQGDSGGPVVC-SGKLQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTIA 221 (223)
T ss_dssp HHSTTTCCTTEEEESCTTSSCBCCTTCTTCEEEE-TTEEEEEEEECSSSSBTTBCEEEEEGGGGHHHHHHHHH
T ss_pred hhhcCcCCCCEEEccCCCCCCCcCCCCcccceEE-CCEEEEEEEECCCCCCCCCCeEEEEHHHhHHHHHHHHh
Confidence 1111 1123455543 35799999999996 78999999987431 1223556777777788776543
No 58
>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG; 2.40A {Bos taurus} SCOP: b.47.1.2
Probab=99.48 E-value=2.7e-12 Score=120.19 Aligned_cols=181 Identities=19% Similarity=0.163 Sum_probs=112.6
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEE
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVL 204 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d---------g~~~~a~vv 204 (443)
-.|.+|.|...... ....|+|.+|+++ +|||+|||+.. .+.|.+.. .+.+..+-+
T Consensus 11 ~~Pw~v~l~~~~~~-----~~~~CgGsLI~~~-~VLTAAHC~~~----------~~~v~~G~~~~~~~~~~~~~~~v~~i 74 (227)
T 1euf_A 11 SRPYMAFLLFKTSG-----KSHICGGFLVRED-FVLTAAHCLGS----------SINVTLGAHNIMERERTQQVIPVRRP 74 (227)
T ss_dssp SCTTEEEEEEESSS-----SEEEEEEEEEETT-EEEECGGGCCE----------EEEEEESCSBTTSCCTTCEEEEEEEE
T ss_pred CcCCEEEEEEeCCC-----CceEEEEEEeeCC-EEEECHHHCCC----------CcEEEEcccccCCCCCccEEEEEEEE
Confidence 35788888654321 1356999999988 99999999964 34455431 244555555
Q ss_pred eecC-------CCCEEEEEEcCCC----CCCccccCCCC-CCCCCCEEEEEecCCCC-----CCceEEEEEEeeecCccC
Q 013444 205 NADF-------HSDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPHSL-----QNTVTAGIVSCVDRKSSD 267 (443)
Q Consensus 205 ~~d~-------~~DlAlLkl~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~-----~~~~t~G~Vs~~~~~~~~ 267 (443)
..|+ .+|||||+++.+. .+.|+.|.... .+..|+.++++||.... ...+....+..+....+.
T Consensus 75 ~~Hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~i~~~~~C~ 154 (227)
T 1euf_A 75 IPHPDYNDETLANDIMLLKLTRKADITDKVSPINLPRSLAEVKPGMMCSVAGWGRLGVNMPSTDKLQEVDLEVQSEEKCI 154 (227)
T ss_dssp EECTTCCTTTCTTCCEEEEESSCCCCCSSCCCCCCCCTTCCCCTTCEEEEEESCBSSTTCCBCSBCEEEEEEBCCTHHHH
T ss_pred EeCCCCCCCCCcCceEEEEECCcCcCCCceeccCCCCccccCCCCCEEEEEEEccCCCCCCCchhheEeEeccccHHHhh
Confidence 5555 3699999998753 35567775432 35789999999997532 123333444333332222
Q ss_pred CCCCC-ccceEEEEc-----ccCCCCCccceeeecCCCEEEEEEEEeecCCCeEEEEeHHHHHHHHHHHH
Q 013444 268 LGLGG-MRREYLQTD-----CAINAGNSGGPLVNIDGEIVGINIMKVAAADGLSFAVPIDSAAKIIEQFK 331 (443)
Q Consensus 268 ~~~~~-~~~~~i~~d-----~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~g~~~aIPi~~i~~~l~~l~ 331 (443)
..+.. .....++.. ...+.|+|||||+- +|.++||++++......-+.+.-+...++++++..
T Consensus 155 ~~~~~~~~~~~~Ca~~~~~~~~~~~GDsGgPL~~-~~~l~Gi~S~gc~~~~~p~vyt~V~~y~~WI~~~~ 223 (227)
T 1euf_A 155 ARFKNYIPFTQICAGDPSKRKNSFSGDSGGPLVC-NGVAQGIVSYGRNDGTTPDVYTRISSFLSWIHSTM 223 (227)
T ss_dssp TTCTTCCTTTEEEESCTTSCCBCCTTCTTCEEEE-TTEEEEEEEECCTTCCSCEEEEEGGGTHHHHHHHT
T ss_pred HhhcCcCCCcEEEccCCCCCCcccccCCCCceEE-CCEEEEEEEEeCCCCCCCeEEEEHHHhHHHHHHHH
Confidence 11111 122345542 23458999999995 78999999997332223455566777777776543
No 59
>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor, disease mutation glycoprotein, hydrolase, zymogen, secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP: b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A* 1hne_E 2rg3_A* 1b0f_A*
Probab=99.48 E-value=1.2e-12 Score=121.80 Aligned_cols=173 Identities=21% Similarity=0.284 Sum_probs=109.7
Q ss_pred CCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEEe
Q 013444 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVLN 205 (443)
Q Consensus 135 ~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d---------g~~~~a~vv~ 205 (443)
.|.+|.|... +...|+|.+|+++ +|||+|||+.+.. ...+.|.+.. .+.+..+.+.
T Consensus 12 ~Pw~v~l~~~--------~~~~CgGtLI~~~-~VLTAAHC~~~~~------~~~~~v~~G~~~~~~~~~~~~~~~v~~i~ 76 (218)
T 2z7f_E 12 WPFMVSLQLR--------GGHFCGATLIAPN-FVMSAAHCVANVN------VRAVRVVLGAHNLSRREPTRQVFAVQRIF 76 (218)
T ss_dssp STTEEEEEET--------TEEEEEEEEEETT-EEEECHHHHTTSC------GGGCEEEESCSBTTSCCTTCEEEEEEEEE
T ss_pred cCcEEEEEeC--------CCcEEEEEEccCC-EEEEcHHhcCCCC------cCcEEEEEeceecCCCCCceEEEEEEEEE
Confidence 5788888753 1256999999988 9999999997632 1345565542 1344444444
Q ss_pred ec------CCCCEEEEEEcCCC----CCCccccCCCC-CCCCCCEEEEEecCCCCC-----CceEEEEEEeeecCccCCC
Q 013444 206 AD------FHSDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPHSLQ-----NTVTAGIVSCVDRKSSDLG 269 (443)
Q Consensus 206 ~d------~~~DlAlLkl~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~~-----~~~t~G~Vs~~~~~~~~~~ 269 (443)
.| ..+|||||+++.+. .+.|+.|.... .+..|+.++++||..... ..+....+..+ ...+..
T Consensus 77 ~h~y~~~~~~~DIALl~L~~~~~~~~~v~picL~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~-~~~C~~- 154 (218)
T 2z7f_E 77 ENGYDPVNLLNDIVILQLNGSATINANVQVAQLPAQGRRLGNGVQCLAMGWGLLGRNRGIASVLQELNVTVV-TSLCRR- 154 (218)
T ss_dssp ESCCBTTTTBSCCEEEEESSCCCCSSSCCCCCCCCTTCCCCTTCEEEEEESSBCSSSCCBCSBCEEEEEEEE-CTTCCT-
T ss_pred ccCCCCCCCCCCEEEEEECCcCcCCCceeccCcCCCCCCCCCCCEEEEEEeCCCCCCCCccchheEeeeEEe-hhHcCc-
Confidence 43 24699999998763 35577775433 356799999999976432 22333333333 222211
Q ss_pred CCCccceEEEE-----cccCCCCCccceeeecCCCEEEEEEEEeecC---CCeEEEEeHHHHHHHHHHHH
Q 013444 270 LGGMRREYLQT-----DCAINAGNSGGPLVNIDGEIVGINIMKVAAA---DGLSFAVPIDSAAKIIEQFK 331 (443)
Q Consensus 270 ~~~~~~~~i~~-----d~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~---~g~~~aIPi~~i~~~l~~l~ 331 (443)
..+.. ....|.|+|||||+. +|.++||++++.... ..-+.+.-+...++++++..
T Consensus 155 ------~~~Ca~~~~~~~~~C~GDSGgPl~~-~~~l~Gi~S~~~g~C~~~~~p~vyt~V~~~~~WI~~~~ 217 (218)
T 2z7f_E 155 ------SNVCTLVRGRQAGVCFGDSGSPLVC-NGLIHGIASFVRGGCASGLYPDAFAPVAQFVNWIDSII 217 (218)
T ss_dssp ------TSEEEECTTSCCBCCTTCTTCEEEE-TTEEEEEEEEESSSTTCSSSCEEEEEGGGGHHHHHHHH
T ss_pred ------ceeeeccCCCCCeeCCCcCCCceEE-ccEEEEEEEeCCccCCCCCCCeEEEEHHHhHHHHHHHh
Confidence 12332 246799999999995 689999999843211 11355677777777776643
No 60
>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP: b.47.1.2
Probab=99.48 E-value=3.7e-12 Score=119.73 Aligned_cols=176 Identities=16% Similarity=0.170 Sum_probs=112.8
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEE
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVL 204 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d---------g~~~~a~vv 204 (443)
-.|.+|.|.. + ..|+|.+|+++ +|||+|||+.. .+.|.+.. .+.+..+-+
T Consensus 11 ~~Pw~v~l~~-----~-----~~CgGsLIs~~-~VLTAAHC~~~----------~~~v~~G~~~~~~~~~~~~~~~v~~i 69 (235)
T 1ton_A 11 SQPWQVAVIN-----E-----YLCGGVLIDPS-WVITAAHCYSN----------NYQVLLGRNNLFKDEPFAQRRLVRQS 69 (235)
T ss_dssp SCTTEEEEES-----S-----SEEEEEEEETT-EEEECGGGCCS----------CCEEEESCSBTTSCCTTCEEECEEEE
T ss_pred CcCcEEEEcc-----C-----CeEEEEEecCC-EEEEcHHhCCC----------CcEEEeCcccccCCCCcceEEEEEEE
Confidence 3577888863 1 56999999987 99999999952 22333321 233344444
Q ss_pred eecC------------------CCCEEEEEEcCCC----CCCccccCCCCCCCCCCEEEEEecCCCC------CCceEEE
Q 013444 205 NADF------------------HSDIAIVKINSKT----PLPAAKLGTSSKLCPGDWVVAMGCPHSL------QNTVTAG 256 (443)
Q Consensus 205 ~~d~------------------~~DlAlLkl~~~~----~~~~~~l~~s~~~~~G~~V~~iG~p~~~------~~~~t~G 256 (443)
..|+ .+|||||+++.+. .+.++.|.. ..+..|+.++++||.... ...+...
T Consensus 70 ~~Hp~y~~~~~~~~~~~~~~~~~~DIALl~L~~~~~~~~~v~picL~~-~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~ 148 (235)
T 1ton_A 70 FRHPDYIPLIVTNDTEQPVHDHSNDLMLLHLSEPADITGGVKVIDLPT-KEPKVGSTCLASGWGSTNPSEMVVSHDLQCV 148 (235)
T ss_dssp EECTTCCCC--------CCCCSTTCCEEEEESSCCCCCSSCCCCCCCC-SCCCTTCEEEEEESSCSSSSSCCCCSBCEEE
T ss_pred EeCCCCcccccccccccccCCCcCCEEEEEcCCccccCCcceeeeCCC-CCCCCCCEEEEEecCCCCCCCCccCccceEE
Confidence 4443 3599999998763 356777765 356789999999997642 1234444
Q ss_pred EEEeeecCccCCCCC-CccceEEEEc-----ccCCCCCccceeeecCCCEEEEEEEEeecC---CCeEEEEeHHHHHHHH
Q 013444 257 IVSCVDRKSSDLGLG-GMRREYLQTD-----CAINAGNSGGPLVNIDGEIVGINIMKVAAA---DGLSFAVPIDSAAKII 327 (443)
Q Consensus 257 ~Vs~~~~~~~~~~~~-~~~~~~i~~d-----~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~---~g~~~aIPi~~i~~~l 327 (443)
.+..+....+...+. ......+... ...|.|+|||||+. +|.++||++++.... ..-+.+.-+...++++
T Consensus 149 ~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI 227 (235)
T 1ton_A 149 NIHLLSNEKCIETYKDNVTDVMLCAGEMEGGKDTCAGDSGGPLIC-DGVLQGITSGGATPCAKPKTPAIYAKLIKFTSWI 227 (235)
T ss_dssp EEEEECGGGCGGGGSTTGGGGEEEEECTTCSCBCCTTCTTCEEEE-TTEEEEEECCCCSSCSCTTCCEEEEEGGGGHHHH
T ss_pred EEEEeCHHHHHHHhcCcCCCCeEeeccCCCCCcCCCCCCccccEE-CCEEEEEEeeCCCCCCCCCCCeEEEEHHHHHHHH
Confidence 454444443322111 1223455542 35799999999995 789999999874321 2235567777788888
Q ss_pred HHHHH
Q 013444 328 EQFKK 332 (443)
Q Consensus 328 ~~l~~ 332 (443)
++..+
T Consensus 228 ~~~~~ 232 (235)
T 1ton_A 228 KKVMK 232 (235)
T ss_dssp HHHHH
T ss_pred HHHHc
Confidence 77654
No 61
>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation, hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG; 2.30A {Homo sapiens} PDB: 2psy_A*
Probab=99.48 E-value=1.7e-12 Score=121.54 Aligned_cols=179 Identities=16% Similarity=0.189 Sum_probs=112.5
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeC----------CCcEEEEEE
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQ----------DGRTFEGTV 203 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~----------dg~~~~a~v 203 (443)
-.|.+|.|.... +...|+|.+|+++ +|||+|||+.. .+.|.+. +.+.+...-
T Consensus 11 ~~Pw~v~l~~~~-------~~~~CgGtLIs~~-~VLTAAHC~~~----------~~~v~~G~~~~~~~~~~~~~~~~v~~ 72 (227)
T 2psx_A 11 TQPWQAALLLRP-------NQLYCGAVLVHPQ-WLLTAAHCRKK----------VFRVRLGHYSLSPVYESGQQMFQGVK 72 (227)
T ss_dssp SCTTEEEEEETT-------TEEEEEEEEEETT-EEEECGGGCCS----------SCEEEESCCBSSCCCCTTCEEEEEEE
T ss_pred CCCCEEEEEecC-------CCceEEEEEEcCC-EEEEhHHcCCC----------CcEEEEeeeecccCCCCCcEEEEEEE
Confidence 357888887532 1256999999987 99999999864 1233332 123455555
Q ss_pred EeecC-------CCCEEEEEEcCCC----CCCccccCCCCCCCCCCEEEEEecCCCCC------CceEEEEEEeeecCcc
Q 013444 204 LNADF-------HSDIAIVKINSKT----PLPAAKLGTSSKLCPGDWVVAMGCPHSLQ------NTVTAGIVSCVDRKSS 266 (443)
Q Consensus 204 v~~d~-------~~DlAlLkl~~~~----~~~~~~l~~s~~~~~G~~V~~iG~p~~~~------~~~t~G~Vs~~~~~~~ 266 (443)
+..|+ .+|||||+++.+. .+.|+.|.. ..+..|+.++++||..... ..+....+..+....+
T Consensus 73 ~~~Hp~y~~~~~~~DIALl~L~~~~~~~~~v~pi~l~~-~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~C 151 (227)
T 2psx_A 73 SIPHPGYSHPGHSNDLMLIKLNRRIRPTKDVRPINVSS-HCPSAGTKCLVSGWGTTKSPQVHFPKVLQCLNISVLSQKRC 151 (227)
T ss_dssp EEECTTCCSSSCTTCCEEEEESSCCCCCSSSCCCCBCS-SCCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEBCCHHHH
T ss_pred EEeCCCCCCCCCCCCEEEEEeCCCCCCCCceeeeECCC-CCCCCCCEEEEEeCcccCCCCCCCCchheEEEEEecCHhHh
Confidence 55554 4699999998752 356777754 4567899999999976422 2233333333322222
Q ss_pred CCCCC-CccceEEEEc----ccCCCCCccceeeecCCCEEEEEEEEeecC---CCeEEEEeHHHHHHHHHHHHH
Q 013444 267 DLGLG-GMRREYLQTD----CAINAGNSGGPLVNIDGEIVGINIMKVAAA---DGLSFAVPIDSAAKIIEQFKK 332 (443)
Q Consensus 267 ~~~~~-~~~~~~i~~d----~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~---~g~~~aIPi~~i~~~l~~l~~ 332 (443)
...+. ......+... ...|.|+|||||+. ++.++||++++.... ..-+.+.-+...+++|++..+
T Consensus 152 ~~~~~~~~~~~~~Ca~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 224 (227)
T 2psx_A 152 EDAYPRQIDDTMFCAGDKAGRDSCQGDSGGPVVC-NGSLQGLVSWGDYPCARPNRPGVYTNLCKFTKWIQETIQ 224 (227)
T ss_dssp HHHSTTTCCTTEEEECCSTTCBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEEGGGCHHHHHHHHH
T ss_pred hhhcCCCCCCCEEcccCCCCCccCCCCCCcceee-CCEEEEEEeecCCCCCCCCCCcEEEEHHHhHHHHHHHHh
Confidence 11111 1123345542 35799999999995 679999999873221 223556777777777776554
No 62
>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes, fibrinogen binding, glycosylati hydrolase; 1.43A {Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 4gso_A 1bqy_A*
Probab=99.48 E-value=2.5e-12 Score=120.43 Aligned_cols=181 Identities=16% Similarity=0.171 Sum_probs=111.4
Q ss_pred CCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC-------Cc-EEEEEEEee
Q 013444 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD-------GR-TFEGTVLNA 206 (443)
Q Consensus 135 ~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d-------g~-~~~a~vv~~ 206 (443)
.|.+|.|... +...|+|.+|+++ ||||+|||+... ..+.+...+ .. ....+.+..
T Consensus 12 ~Pw~v~l~~~--------~~~~CgGtLI~~~-~VLTAAHC~~~~--------~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 74 (234)
T 3s69_A 12 HRSLVAFFNS--------TGFFCSGTLINEE-WVLTAAHCDNTN--------FQMKLGVHSKKVLNEDEQTRNPKEKFIC 74 (234)
T ss_dssp CTTEEEEECS--------SCEEEEEEEEETT-EEEECGGGCCSS--------CEEEESCCCSSSCCTTCEEECEEEEEEC
T ss_pred CceEEEEeeC--------CCeEEeEEEeeCC-EEEEchhhCCCC--------ceEEecccccccccCCcceeeceEEEEC
Confidence 6788888642 2257999999987 999999998641 122221111 11 122333333
Q ss_pred cC-------CCCEEEEEEcCCC----CCCccccCCCCCCCCCCEEEEEecCCCCC------CceEEEEEEeeecCccCCC
Q 013444 207 DF-------HSDIAIVKINSKT----PLPAAKLGTSSKLCPGDWVVAMGCPHSLQ------NTVTAGIVSCVDRKSSDLG 269 (443)
Q Consensus 207 d~-------~~DlAlLkl~~~~----~~~~~~l~~s~~~~~G~~V~~iG~p~~~~------~~~t~G~Vs~~~~~~~~~~ 269 (443)
|+ .+|||||+++.+. .+.++.|.. .....|+.++++||..... .......+..+....+...
T Consensus 75 h~~~~~~~~~~DIALl~L~~~v~~~~~v~pi~l~~-~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~ 153 (234)
T 3s69_A 75 PNKKNDEVLDKDIMLIKLDSRVSNSEHIVPLSLPS-SPPSVGSVCHIMGWGSITPIKVTYPDVPYCAYINLLDDAVCQAG 153 (234)
T ss_dssp TTCCTTCTTSSCCEEEEESSCCCCBTTBCCCCCCS-SCCCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECHHHHHHH
T ss_pred CCccCCCCCcccEEEEeeCCcCCCCCcceeeecCC-CCCCCCCEEEEEECCCCCCCCcCcccccceeEEeecCHHHHhhh
Confidence 43 3699999998752 345677754 4456799999999976321 2333333433333222111
Q ss_pred C--CCccceEEEE-----cccCCCCCccceeeecCCCEEEEEEEEeecC---CCeEEEEeHHHHHHHHHHHHHcC
Q 013444 270 L--GGMRREYLQT-----DCAINAGNSGGPLVNIDGEIVGINIMKVAAA---DGLSFAVPIDSAAKIIEQFKKNG 334 (443)
Q Consensus 270 ~--~~~~~~~i~~-----d~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~---~g~~~aIPi~~i~~~l~~l~~~g 334 (443)
+ .......+.. ....|.|+|||||+. +++++||++++.... ..-+.+.-+...+++|++..+..
T Consensus 154 ~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~~~ 227 (234)
T 3s69_A 154 YPELLTEYRTLCAGILEGGKDTCGGDSGGPLIC-NGQFQGIVSFGAHPCGQGLKPGVYTKVFDYNHWIQSIIAGN 227 (234)
T ss_dssp CTTCCTTSCEEEEECTTCSCBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHHTC
T ss_pred cccccCCcceEeccCCCCCCccCCCCCccceEE-cCEEEEEEEEcccccCCCCCCcEEeeHHHHHHHHHHHhcCC
Confidence 1 1112234443 346799999999995 688999999986421 12456677888888888876543
No 63
>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes scabiei type hominis}
Probab=99.47 E-value=1.1e-12 Score=122.70 Aligned_cols=184 Identities=16% Similarity=0.204 Sum_probs=117.8
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC------CcEEEEEEEeec
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD------GRTFEGTVLNAD 207 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d------g~~~~a~vv~~d 207 (443)
-.|.+|.|.... ...|+|.+|+++ +|||+|||+.+.. ...+.|.+.. +..+..+.+..|
T Consensus 11 ~~Pw~v~l~~~~--------~~~CgGtLIs~~-~VLTAAHC~~~~~------~~~~~v~~G~~~~~~~~~~~~v~~i~~h 75 (235)
T 3h7t_A 11 KEPWAVGVLVDE--------KPFCGGSILTAN-FVITAAQCVDGTK------PSDISIHYGSSYRTTKGTSVMAKKIYIV 75 (235)
T ss_dssp TSTTEEEEEETT--------SCCEEEEESSSS-EEEECHHHHTTCC------GGGEEEEESCSBSSSSSEEEEEEEEEEC
T ss_pred CCCcEEEEecCC--------CceEeEEEeeCC-EEEECHHHCCCCC------CCeeEEEcCccccccCCceeeeeeEEee
Confidence 357888887532 256999999988 9999999996432 2456666642 234444444333
Q ss_pred ------CCCCEEEEEEcCCC-----CCCccccCCCC-CCCCCCEEEEEecCCCC------CCceEEEEEEeeecCccCCC
Q 013444 208 ------FHSDIAIVKINSKT-----PLPAAKLGTSS-KLCPGDWVVAMGCPHSL------QNTVTAGIVSCVDRKSSDLG 269 (443)
Q Consensus 208 ------~~~DlAlLkl~~~~-----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~------~~~~t~G~Vs~~~~~~~~~~ 269 (443)
..+|||||+++.+. .+.++.|.... .+..|+.+++.||.... ...+....+.-+....+...
T Consensus 76 ~y~~~~~~~DiAll~L~~~v~~~~~~v~pi~Lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~ 155 (235)
T 3h7t_A 76 RYHPLTMQNNYAVIETEMPIKLDDKTTKKIELPSLLYDPEPDTSVLVSGWGSTNFKSLEYSGDLMEANFTVVDRKSCEEQ 155 (235)
T ss_dssp SCBTTTTBTCCEEEEESSCCCCCSSSCCCCBCCCTTCCCCTTCEEEEEECCCSSTTCCCCCSBCEEEEEEEECHHHHHHH
T ss_pred ecCCCCCCCCeEEEEeccccccCCccccceecCccccCCCCCCeEEEEecCCCCCCCCchhHHHhhCCCceeCHHHHHHH
Confidence 24699999998763 45567775433 26789999999997632 22344444443333222110
Q ss_pred CC------CccceEEEE-----cccCCCCCccceeeecCCCEEEEEEEEeecC-CCeEEEEeHHHHHHHHHHHHHc
Q 013444 270 LG------GMRREYLQT-----DCAINAGNSGGPLVNIDGEIVGINIMKVAAA-DGLSFAVPIDSAAKIIEQFKKN 333 (443)
Q Consensus 270 ~~------~~~~~~i~~-----d~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~-~g~~~aIPi~~i~~~l~~l~~~ 333 (443)
+. ......+.. ....|.|+|||||+. +|+++||++++..-. ..-+.+.-+....++|++..+.
T Consensus 156 ~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~-~~~l~Gi~S~g~~C~~~~p~vyt~v~~~~~WI~~~i~~ 230 (235)
T 3h7t_A 156 YKQIEADKYIYDGVFCAGGEYDETYIGYGDAGDPAVQ-NGTLVGVASYISSMPSEFPSVFLRVGYYVLDIKDIISG 230 (235)
T ss_dssp HHTTTCGGGCSTTEEEECBTTTTBBCCTTCTTCEEEE-TTEEEEEECCCTTCCTTSCEEEEEGGGGHHHHHHHHTT
T ss_pred hhhcccCccccCCeEecCCCCCCCccccCCCCCceee-CCeEEEEEEecCCCCCCCCceEEEHHHHHHHHHHHHhC
Confidence 00 012334554 346789999999996 789999999874311 2345667788888888877654
No 64
>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural proteo europe, spine, structural genomics, hydrolase; HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A*
Probab=99.47 E-value=3.5e-12 Score=119.16 Aligned_cols=176 Identities=16% Similarity=0.187 Sum_probs=111.6
Q ss_pred CCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeC----------CCcEEEEEEE
Q 013444 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQ----------DGRTFEGTVL 204 (443)
Q Consensus 135 ~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~----------dg~~~~a~vv 204 (443)
.|.+|.|... +...|+|.+|+++ +|||+|||+.+ .+.|.+. +.+.+....+
T Consensus 12 ~Pw~v~l~~~--------~~~~CgGsLIs~~-~VLTAAHC~~~----------~~~v~~g~~~~~~~~~~~~~~~~v~~~ 72 (223)
T 2bdg_A 12 QPWQAALVME--------NELFCSGVLVHPQ-WVLSAAHCFQN----------SYTIGLGLHSLEADQEPGSQMVEASLS 72 (223)
T ss_dssp STTEEEEECS--------SCEEEEEEEEETT-EEEECGGGCCS----------SEEEEESCSBSCGGGCTTCEEEEEEEE
T ss_pred CCcEEEEeeC--------CCEEEEEEEecCC-EEEEhHHhCCC----------CeEEEEeeeecCCCCCCCcEEEEEEEE
Confidence 5788888642 1357999999988 99999999964 2333332 1234555555
Q ss_pred eecC-------CCCEEEEEEcCC----CCCCccccCCCCCCCCCCEEEEEecCCCCC----CceEEEEEEeeecCccCCC
Q 013444 205 NADF-------HSDIAIVKINSK----TPLPAAKLGTSSKLCPGDWVVAMGCPHSLQ----NTVTAGIVSCVDRKSSDLG 269 (443)
Q Consensus 205 ~~d~-------~~DlAlLkl~~~----~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~----~~~t~G~Vs~~~~~~~~~~ 269 (443)
..|+ .+|||||+++.+ ..+.|+.|.. ..+..|+.+++.||..... ..+....+.-+....+...
T Consensus 73 ~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~pi~l~~-~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~ 151 (223)
T 2bdg_A 73 VRHPEYNRPLLANDLMLIKLDESVSESDTIRSISIAS-QCPTAGNSCLVSGWGLLANGRMPTVLQCVNVSVVSEEVCSKL 151 (223)
T ss_dssp EECTTTTSSTTCSCCEEEEESSCCCCCSSCCCCCBCS-SCCCTTCEEEEEESCCCTTSCCCSBCEEEEEEBCCHHHHHHH
T ss_pred EeCCCCCCCCCcCcEEEEEECCcccCCCceecccCCC-CCCCCCCEEEEEeCcccCCCCCCCcceEEEEEEeCHHHhhhh
Confidence 5554 369999999876 2356777754 4567899999999986432 2233333333322222111
Q ss_pred CC-CccceEEEEc-----ccCCCCCccceeeecCCCEEEEEEEEeecC---CCeEEEEeHHHHHHHHHHHH
Q 013444 270 LG-GMRREYLQTD-----CAINAGNSGGPLVNIDGEIVGINIMKVAAA---DGLSFAVPIDSAAKIIEQFK 331 (443)
Q Consensus 270 ~~-~~~~~~i~~d-----~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~---~g~~~aIPi~~i~~~l~~l~ 331 (443)
+. ......+... ...|.|+|||||+. +|.++||++++.... ..-+.+.-+...++++++..
T Consensus 152 ~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i 221 (223)
T 2bdg_A 152 YDPLYHPSMFCAGGGQDQKDSCNGDSGGPLIC-NGYLQGLVSFGKAPCGQVGVPGVYTNLCKFTEWIEKTV 221 (223)
T ss_dssp STTTCCTTEEEECCSTTCCBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEECGGGTHHHHHHHH
T ss_pred hCCCCCCCeEeccCCCCCCCcCCCCCCchheE-ccEEEEEEEecCCCCCCCCCCcEEEEHHHhHHHHHHHh
Confidence 11 1123455543 35799999999995 679999999975321 22455677777777776654
No 65
>4i8h_A Cationic trypsin, beta-trypsin; serine protease, hydrolase; HET: BEN; 0.75A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=99.47 E-value=2e-12 Score=120.40 Aligned_cols=176 Identities=18% Similarity=0.246 Sum_probs=112.3
Q ss_pred CCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeC---------CCcEEEEEEEe
Q 013444 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQ---------DGRTFEGTVLN 205 (443)
Q Consensus 135 ~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~---------dg~~~~a~vv~ 205 (443)
.|.+|.|.. +...|+|.+|+++ +|||+|||+.. .+.|.+. +.+.+..+-+.
T Consensus 12 ~Pw~v~l~~---------~~~~C~GtLI~~~-~VLTAAhC~~~----------~~~v~~g~~~~~~~~~~~~~~~v~~~~ 71 (223)
T 4i8h_A 12 VPYQVSLNS---------GYHFCGGSLINSQ-WVVSAAHCYKS----------GIQVRLGEDNINVVEGNEQFISASKSI 71 (223)
T ss_dssp STTEEEEES---------SSEEEEEEECSSS-EEEECGGGCCS----------SCEEEESCSSTTSCCSCCEEEEEEEEE
T ss_pred CCeEEEecC---------CCcEEEEEEEcCC-EEEecHHhCCC----------CcEEEEccccccccCCCcEEEEEeEEE
Confidence 577888861 1256999999988 99999999964 2223332 22445555566
Q ss_pred ecC-------CCCEEEEEEcCCC----CCCccccCCCCCCCCCCEEEEEecCCCCC------CceEEEEEEeeecCccCC
Q 013444 206 ADF-------HSDIAIVKINSKT----PLPAAKLGTSSKLCPGDWVVAMGCPHSLQ------NTVTAGIVSCVDRKSSDL 268 (443)
Q Consensus 206 ~d~-------~~DlAlLkl~~~~----~~~~~~l~~s~~~~~G~~V~~iG~p~~~~------~~~t~G~Vs~~~~~~~~~ 268 (443)
.|+ .+|||||+++.+. .+.++.|.. .....|+.+++.||..... ..+....+..+....+..
T Consensus 72 ~hp~y~~~~~~~DIAll~L~~~~~~~~~v~pi~l~~-~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~ 150 (223)
T 4i8h_A 72 VHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPT-SCASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKS 150 (223)
T ss_dssp ECTTCCTTTCTTCCEEEEESSCCCCBTTBCCCBCCS-SCCCTTCEEEEEESSCCCSSSCCCCSSCEEEEEEBCCHHHHHH
T ss_pred ECcCCCCCCCcCCEEEEEECCcCcCCCceeceECCC-CCCCCCCEEEEEecccccCCCCCccccceEEEeeecCHHHHHH
Confidence 665 3699999998753 356777754 3467899999999976422 223333333332222111
Q ss_pred CCC-CccceEEEEc-----ccCCCCCccceeeecCCCEEEEEEEEeecC--CCeEEEEeHHHHHHHHHHHHH
Q 013444 269 GLG-GMRREYLQTD-----CAINAGNSGGPLVNIDGEIVGINIMKVAAA--DGLSFAVPIDSAAKIIEQFKK 332 (443)
Q Consensus 269 ~~~-~~~~~~i~~d-----~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~--~g~~~aIPi~~i~~~l~~l~~ 332 (443)
.+. ......+... ...|.|+|||||+. +++++||++++..-. ..-+.+.-+...+++|++..+
T Consensus 151 ~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~-~~~l~Gi~S~g~~c~~~~~p~vyt~v~~~~~WI~~~i~ 221 (223)
T 4i8h_A 151 AYPGQITSNMFCAGYLEGGKDSCQGDSGGPVVC-SGKLQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTIA 221 (223)
T ss_dssp HSTTTCCTTEEEESCTTSSCBCCTTCTTCEEEE-TTEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred hhCCCCCCCeEeccCCCCCCccCCCCCCCcEEE-CCEEEEEEEcCCCCCCCCCCeEEEEHHHHHHHHHHHHh
Confidence 111 1123345442 45789999999995 679999999875421 224556777778888877654
No 66
>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease (elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2
Probab=99.46 E-value=1.8e-12 Score=122.33 Aligned_cols=183 Identities=17% Similarity=0.219 Sum_probs=112.8
Q ss_pred CCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeC--------CCcEEEEEEEee
Q 013444 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQ--------DGRTFEGTVLNA 206 (443)
Q Consensus 135 ~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~--------dg~~~~a~vv~~ 206 (443)
.|.+|.|....+. ....|+|.+|+++ +|||+|||+.+.. ...+.|.+. +++.+..+-+..
T Consensus 12 ~Pw~v~l~~~~~~-----~~~~CgGtLIs~~-~VLTAAHC~~~~~------~~~~~v~~G~~~~~~~~~~~~~~v~~i~~ 79 (241)
T 1m9u_A 12 FPWQLSQQRQSGS-----WSHSCGASLLSST-SALSASHCVDGVL------PNNIRVIAGLWQQSDTSGTQTANVDSYTM 79 (241)
T ss_dssp STTEEEEEEESSS-----EEEEEEEEECSSS-EEEECHHHHTTCC------GGGEEEEESCSBTTCCTTCEEEEEEEEEE
T ss_pred cCeEEEEEecCCc-----eeeeeEEEEEeCC-EEEecHHhCCCCC------cceEEEEEEeecCCCCCCceEEEEEEEEe
Confidence 5778888764321 1256999999988 9999999997631 245666653 234566666666
Q ss_pred cCCC---------CEEEEEEcCCC----CCCccccCCC-CCCCCCCEEEEEecCCCCC-----CceEEEEEEeeecCccC
Q 013444 207 DFHS---------DIAIVKINSKT----PLPAAKLGTS-SKLCPGDWVVAMGCPHSLQ-----NTVTAGIVSCVDRKSSD 267 (443)
Q Consensus 207 d~~~---------DlAlLkl~~~~----~~~~~~l~~s-~~~~~G~~V~~iG~p~~~~-----~~~t~G~Vs~~~~~~~~ 267 (443)
|+.+ |||||+++.+. .+.++.|... .....|+.+++.||..... ..+....+..+....+.
T Consensus 80 hp~y~~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~ 159 (241)
T 1m9u_A 80 HENYGAGTASYSNDIAILHLATSISLGGNIQAAVLPANNNNDYAGTTCVISGWGRTDGTNNLPDILQKSSIPVITTAQCT 159 (241)
T ss_dssp CTTTTCSSSTTTTCCEEEEESSCCCCCSSCCCCCCCSCSSCCCTTCEEEEEESSCSSSSSCCCSBCEEEEEEBCCHHHHH
T ss_pred CCCcCCCCCcccccEEEEEecCccccCCCccccCcCCCcCCCCCCCEEEEEeCcccCCCCCcccceeEeeEEEEcHHHhh
Confidence 6544 99999998763 3567777554 2233799999999976422 23344444333322221
Q ss_pred C---CCCC--ccceEEEEc-----ccCCCCCccceeeecCC--CEEEEEEE--EeecC----CCeEEEEeHHHHHHHHHH
Q 013444 268 L---GLGG--MRREYLQTD-----CAINAGNSGGPLVNIDG--EIVGINIM--KVAAA----DGLSFAVPIDSAAKIIEQ 329 (443)
Q Consensus 268 ~---~~~~--~~~~~i~~d-----~~i~~G~SGGPlvd~~G--~VVGI~s~--~~~~~----~g~~~aIPi~~i~~~l~~ 329 (443)
. .... .....+... ...|.|+|||||+-.+| .++||+++ +.... ..-+.+.-+....++|++
T Consensus 160 ~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~l~Gi~S~~~~~g~~C~~~~~p~vyt~V~~~~~WI~~ 239 (241)
T 1m9u_A 160 AAMVGVGGANIWDNHICVQDPAGNTGACNGDSGGPLNCPDGGTRVVGVTSWVVSSGLGACLPDYPSVYTRVSAYLGWIGD 239 (241)
T ss_dssp HHHTTSTTCCCCTTEEEECCTTSCCBCCTTCTTCEEEEESSSEEEEEEEEECCBCTTSCBCTTSCEEEEEGGGTHHHHHH
T ss_pred hhhcccCCCcccCCcEEECcCCCCCeeecCcCCccEEEeCCCEEEEEEEEEeccCCCCccCCCCCEEEEEhHHhHhHHhh
Confidence 1 1011 223455543 35799999999996545 79999998 32111 123455666666666654
No 67
>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET: NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G*
Probab=99.46 E-value=2e-12 Score=121.80 Aligned_cols=178 Identities=17% Similarity=0.166 Sum_probs=111.7
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEE
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVL 204 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d---------g~~~~a~vv 204 (443)
-.|.+|.|... +...|+|.+|+++ +|||+|||+.. .+.|.+.. ++.+..+-+
T Consensus 11 ~~Pw~v~l~~~--------~~~~CgGtLI~~~-~VLTAAHC~~~----------~~~v~~G~~~~~~~~~~~~~~~v~~~ 71 (237)
T 1ao5_A 11 SQPWQVAVYYQ--------KEHICGGVLLDRN-WVLTAAHCYVD----------QYEVWLGKNKLFQEEPSAQHRLVSKS 71 (237)
T ss_dssp SCTTEEEEEET--------TEEEEEEEEEETT-EEEECTTCCCS----------SCEEEESCCBSSSCCSSCEECCEEEE
T ss_pred CcCCEEEEeeC--------CCeEEEEEEeeCC-EEEECHHHCCC----------CCEEEecccccccCCCCcEEEEEEEE
Confidence 35788888742 1256999999988 99999999953 22343321 233334444
Q ss_pred eecC------------------CCCEEEEEEcCCC----CCCccccCCCCCCCCCCEEEEEecCCCCC------CceEEE
Q 013444 205 NADF------------------HSDIAIVKINSKT----PLPAAKLGTSSKLCPGDWVVAMGCPHSLQ------NTVTAG 256 (443)
Q Consensus 205 ~~d~------------------~~DlAlLkl~~~~----~~~~~~l~~s~~~~~G~~V~~iG~p~~~~------~~~t~G 256 (443)
..|+ .+|||||+++.+. .+.|+.|.. ..+..|+.++++||..... ..+...
T Consensus 72 ~~Hp~y~~~~~~~~~~~~~~~~~~DIALl~L~~~~~~~~~v~picL~~-~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~ 150 (237)
T 1ao5_A 72 FPHPGFNMSLLMLQTIPPGADFSDDLMLLRLSKPADITDVVKPIALPT-KEPKPGSKCLASGWGSITPTRWQKPDDLQCV 150 (237)
T ss_dssp EECTTSCGGGGGCSSCCTTCCCTTCCEEEEESSCCCCCSSSCCCCCCC-SCCCTTCEEEEEESCCSSCC-CCCCSBCEEE
T ss_pred EcCCCcCcccccccccccccCCCCCEEEEEeCCccccCCceeCCCcCC-CCCCCCCEEEEEECCccCCCCCCCCCcccEE
Confidence 4443 5799999998763 355777755 4567899999999975321 233334
Q ss_pred EEEeeecCccCCCCC-CccceEEEEc-----ccCCCCCccceeeecCCCEEEEEEEEeecC---CCeEEEEeHHHHHHHH
Q 013444 257 IVSCVDRKSSDLGLG-GMRREYLQTD-----CAINAGNSGGPLVNIDGEIVGINIMKVAAA---DGLSFAVPIDSAAKII 327 (443)
Q Consensus 257 ~Vs~~~~~~~~~~~~-~~~~~~i~~d-----~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~---~g~~~aIPi~~i~~~l 327 (443)
.+..+....+...+. ......+... ...|.|+|||||+. +|.++||++++.... ..-+.+.-+...+++|
T Consensus 151 ~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI 229 (237)
T 1ao5_A 151 FITLLPNENCAKVYLQKVTDVMLCAGEMGGGKDTCRDDSGGPLIC-DGILQGTTSYGPVPCGKPGVPAIYTNLIKFNSWI 229 (237)
T ss_dssp EEEEECHHHHHHHCSSCCCTTEEEEECTTCSCBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEECGGGGHHHH
T ss_pred EEEecChhHhhhhhcccCCCCEEEEccCCCCCCCCCCCCcceEEE-CCEEeEEEeEcCCCCCCCCCCcEEEEHHHHHHHH
Confidence 443333222211111 1123345443 35799999999996 789999999973221 1235567777778888
Q ss_pred HHHHH
Q 013444 328 EQFKK 332 (443)
Q Consensus 328 ~~l~~ 332 (443)
++..+
T Consensus 230 ~~~~~ 234 (237)
T 1ao5_A 230 KDTMM 234 (237)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 76553
No 68
>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6, benzamidine, protease, brain serine protease, myelencephalon specific protease, MSP, ZYME; 1.56A {Homo sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A*
Probab=99.46 E-value=3.7e-12 Score=119.00 Aligned_cols=177 Identities=15% Similarity=0.177 Sum_probs=112.1
Q ss_pred CCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeC---------CCcEEEEEEEe
Q 013444 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQ---------DGRTFEGTVLN 205 (443)
Q Consensus 135 ~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~---------dg~~~~a~vv~ 205 (443)
.|.+|.|... +...|+|.+|+++ +|||+|||+.. .+.|.+. +++.+...-+.
T Consensus 12 ~Pw~v~l~~~--------~~~~CgGtLIs~~-~VLTAAHC~~~----------~~~v~~G~~~~~~~~~~~~~~~v~~i~ 72 (223)
T 1lo6_A 12 HPYQAALYTS--------GHLLCGGVLIHPL-WVLTAAHCKKP----------NLQVFLGKHNLRQRESSQEQSSVVRAV 72 (223)
T ss_dssp CTTEEEEEET--------TEEEEEEEEEETT-EEEECGGGCCT----------TCEEEESCSBTTSCCTTCEEEEEEEEE
T ss_pred CCCEEEEecC--------CCEEEEeEEecCC-EEEECccCCCC----------CeEEEEcceecCCCCCCcEEEEEEEEE
Confidence 5788888632 1267999999988 99999999863 2233332 13445555555
Q ss_pred ecC-------CCCEEEEEEcCCC----CCCccccCCCCCCCCCCEEEEEecCCCC----CCceEEEEEEeeecCccCCCC
Q 013444 206 ADF-------HSDIAIVKINSKT----PLPAAKLGTSSKLCPGDWVVAMGCPHSL----QNTVTAGIVSCVDRKSSDLGL 270 (443)
Q Consensus 206 ~d~-------~~DlAlLkl~~~~----~~~~~~l~~s~~~~~G~~V~~iG~p~~~----~~~~t~G~Vs~~~~~~~~~~~ 270 (443)
.|+ .+|||||+++.+. .+.|+.|... ....|+.++++||.... ...+....+.-+....+...+
T Consensus 73 ~Hp~y~~~~~~~DIAll~L~~~~~~~~~v~pi~l~~~-~~~~~~~~~v~GwG~~~~~~~~~~l~~~~~~~~~~~~C~~~~ 151 (223)
T 1lo6_A 73 IHPDYDAASHDQDIMLLRLARPAKLSELIQPLPLERD-CSANTTSCHILGWGKTADGDFPDTIQCAYIHLVSREECEHAY 151 (223)
T ss_dssp ECTTCCTTTCTTCCEEEEESSCCCCBTTBCCCCBCCC-TTCCCCEEEEEESSCCTTSSCCSBCEEEEEEEECHHHHHHHS
T ss_pred ECCCCCCCCCcCeEEEEEECCcccCCCceeecccCCC-CCCCCCEEEEEEECCCCCCCcCceeeEEEEEEeCHHHhhhhh
Confidence 554 4699999998763 3456777543 45789999999997642 123334444333332221111
Q ss_pred C-CccceEEEEc-----ccCCCCCccceeeecCCCEEEEEEEEeec---CCCeEEEEeHHHHHHHHHHHHH
Q 013444 271 G-GMRREYLQTD-----CAINAGNSGGPLVNIDGEIVGINIMKVAA---ADGLSFAVPIDSAAKIIEQFKK 332 (443)
Q Consensus 271 ~-~~~~~~i~~d-----~~i~~G~SGGPlvd~~G~VVGI~s~~~~~---~~g~~~aIPi~~i~~~l~~l~~ 332 (443)
. .....++... ...|.|+|||||+. +|.++||++++... ...-+.+.-+...+++|++..+
T Consensus 152 ~~~~~~~~~Ca~~~~~~~~~C~GDsGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~ 221 (223)
T 1lo6_A 152 PGQITQNMLCAGDEKYGKDSCQGDSGGPLVC-GDHLRGLVSWGNIPCGSKEKPGVYTNVCRYTNWIQKTIQ 221 (223)
T ss_dssp TTTCCTTEEEEECTTTCCBCCTTTTTCEEEE-TTEEEEEEEECCSSCCCSSSCEEEEEGGGGHHHHHHHHC
T ss_pred CCCCCCCeEEeecCCCCCeeccccCCCcEEe-CCEEEEEEeeCCCCCCCCCCCcEEEEHHHHHHHHHHHhc
Confidence 1 1123345542 45799999999995 68999999987322 1224556777777888876653
No 69
>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS; 1.70A {Solenopsis invicta} SCOP: b.47.1.2
Probab=99.46 E-value=2.5e-12 Score=119.97 Aligned_cols=181 Identities=20% Similarity=0.230 Sum_probs=114.8
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC------CcEEEEEEEeec
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD------GRTFEGTVLNAD 207 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d------g~~~~a~vv~~d 207 (443)
-.|.+|.|... +...|+|.+|+++ +|||+|||+.+... ...+.|.+.. ++.+..+-+..|
T Consensus 11 ~~Pw~v~l~~~--------~~~~CgGtLIs~~-~VLTAAHC~~~~~~-----~~~~~v~~G~~~~~~~~~~~~v~~~~~h 76 (222)
T 1eq9_A 11 KYPYQVSLRLS--------GSHRCGASILDNN-NVLTAAHCVDGLSN-----LNRLKVHVGTNYLSESGDVYDVEDAVVN 76 (222)
T ss_dssp SCTTEEEEEET--------TEEEEEEEECSSS-EEEECHHHHTTCSC-----GGGEEEEESCSBTTSCCEEEEEEEEEEC
T ss_pred CcceEEEEEeC--------CCeEEEEEEeeCC-EEEEhhhcCCCCCC-----CceEEEEECceecCCCCeEEEEEEEEEC
Confidence 35788888742 1256999999987 99999999976321 2356666542 355666666666
Q ss_pred C-------CCCEEEEEEcCCC----CCCccccCCCCCCCCCCEEEEEecCCCCC-----CceEEEEEEeeecCccC-CCC
Q 013444 208 F-------HSDIAIVKINSKT----PLPAAKLGTSSKLCPGDWVVAMGCPHSLQ-----NTVTAGIVSCVDRKSSD-LGL 270 (443)
Q Consensus 208 ~-------~~DlAlLkl~~~~----~~~~~~l~~s~~~~~G~~V~~iG~p~~~~-----~~~t~G~Vs~~~~~~~~-~~~ 270 (443)
+ .+|||||+++.+. .+.|+.|........|+.+++.||..... ..+....+.-+....+. ..+
T Consensus 77 p~y~~~~~~~DIALl~L~~~v~~~~~v~picL~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~ 156 (222)
T 1eq9_A 77 KNYDDFLLRNDVALVHLTNPIKFNDLVQPIKLSTNDEDLESNPCTLTGWGSTRLGGNTPNALQEIELIVHPQKQCERDQW 156 (222)
T ss_dssp TTCBTTTTBCCCEEEEESSCCCCBTTBCCCEECSCCTTCTTSEEEEEECCCSSTTCCCCSBCEEEEEEEECHHHHHHHSS
T ss_pred CCCCCCCCCCCEEEEEECCccccCCceEccCCCCCCcCCCCCEEEEEcccccCCCCcccchheEeEEEEeCHHHhCcccC
Confidence 5 3699999998763 35677776544446789999999976421 23333333333322221 111
Q ss_pred CCccceEEEEc----ccCCCCCccceeeecCCCEEEEEEEEeecC-CCeEEEEeHHHHHHHHHHH
Q 013444 271 GGMRREYLQTD----CAINAGNSGGPLVNIDGEIVGINIMKVAAA-DGLSFAVPIDSAAKIIEQF 330 (443)
Q Consensus 271 ~~~~~~~i~~d----~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~-~g~~~aIPi~~i~~~l~~l 330 (443)
. .....+... ...|.|+|||||+. +|.++||++++..-. ..-+.+.-+....++|++.
T Consensus 157 ~-~~~~~~Ca~~~~~~~~C~GDSGgPL~~-~~~l~GI~S~g~~C~~~~p~vyt~V~~~~~WI~~~ 219 (222)
T 1eq9_A 157 R-VIDSHICTLTKRGEGACHGDSGGPLVA-NGAQIGIVSFGSPCALGEPDVYTRVSSFVSWINAN 219 (222)
T ss_dssp S-CCTTEEEECCCTTCBCCTTCTTCEEEE-TTEEEEEEEECSTTTSSSCEEEEEGGGGHHHHHHT
T ss_pred C-CCccEEeecCCCCCeeeeCCccceEEE-CCEEEEEEEECCCcCCCCCCEEEEHHHHHHHHHHH
Confidence 1 123344442 35799999999995 689999999974311 1234556677677777653
No 70
>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase; 1.42A {Equus caballus} SCOP: b.47.1.2
Probab=99.46 E-value=1.6e-12 Score=122.46 Aligned_cols=176 Identities=18% Similarity=0.158 Sum_probs=108.5
Q ss_pred CCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEEe
Q 013444 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVLN 205 (443)
Q Consensus 135 ~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d---------g~~~~a~vv~ 205 (443)
.|.+|.|... +...|+|.+|+++ +|||+|||+.. .+.|.+.. ++.+..+-+.
T Consensus 12 ~Pw~v~l~~~--------~~~~CgGsLIs~~-~VLTAAHC~~~----------~~~v~~G~~~~~~~~~~~~~~~v~~~~ 72 (237)
T 1gvz_A 12 KPWQVAVYHQ--------GHFQCGGVLVHPQ-WVLTAAHCMSD----------DYQIWLGRHNLSKDEDTAQFHQVSDSF 72 (237)
T ss_dssp STTEEEEEET--------TEEEEEEEEEETT-EEEECGGGCCS----------SCEEEESCSBTTSCCTTCEEECEEEEE
T ss_pred CCeEEEEeeC--------CceEEEeEEeeCC-EEEEcHHhCCC----------CCeEEEeecccccCCCCceEEEeeeEe
Confidence 5788888642 1256999999988 99999999953 22333321 2444455555
Q ss_pred ecC------------------CCCEEEEEEcCCC----CCCccccCCCCCCCCCCEEEEEecCCCC-CC-----ceEEEE
Q 013444 206 ADF------------------HSDIAIVKINSKT----PLPAAKLGTSSKLCPGDWVVAMGCPHSL-QN-----TVTAGI 257 (443)
Q Consensus 206 ~d~------------------~~DlAlLkl~~~~----~~~~~~l~~s~~~~~G~~V~~iG~p~~~-~~-----~~t~G~ 257 (443)
.|+ .+|||||+|+.+. .+.++.|.. .....|+.++++||.... .. .+....
T Consensus 73 ~hp~y~~~~~~~~~~~~~~~~~~DIALl~L~~~~~~~~~v~picLp~-~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~ 151 (237)
T 1gvz_A 73 LDPQFDLSLLKKKYLRPYDDISHDLMLLRLAQPARITDAVKILDLPT-QEPKLGSTCYTSGWGLISTFTNRGSGTLQCVE 151 (237)
T ss_dssp ECTTSCGGGGGCSSCCTTSCCTTCCEEEEESSCCCCBTTBCCCCCCS-SCCCTTCEEEEEEEECSCTTTCSEEEEEEEEE
T ss_pred cCCccCcccccccccccccccCCceEEEEeCCCcccCCcEeeeECCC-CCCCCCCEEEEECCCcccCCCCCCCCccEEEE
Confidence 554 6799999999763 345777754 346789999999998642 11 222233
Q ss_pred EEeeecCccCCCCCC-ccceEEEEc-----ccCCCCCccceeeecCCCEEEEEEEEeecC---CCeEEEEeHHHHHHHHH
Q 013444 258 VSCVDRKSSDLGLGG-MRREYLQTD-----CAINAGNSGGPLVNIDGEIVGINIMKVAAA---DGLSFAVPIDSAAKIIE 328 (443)
Q Consensus 258 Vs~~~~~~~~~~~~~-~~~~~i~~d-----~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~---~g~~~aIPi~~i~~~l~ 328 (443)
+.-+....+...+.. .....+... ...|.|+|||||+. +|.++||++++.... ..-+.+.-+...+++|+
T Consensus 152 ~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~GI~S~g~~~C~~~~~p~vyt~V~~~~~WI~ 230 (237)
T 1gvz_A 152 LRLQSNEKCARAYPEKMTEFVLCATHRDDSGSICLGDSGGALIC-DGVFQGITSWGYSECADFNDNFVFTKVMPHKKWIK 230 (237)
T ss_dssp EEEECGGGGCSSCGGGCCTTEEEEECSSTTCEECGGGTTCEEEE-TTEEEEEECCCSSSCEETTTSCCEEESGGGHHHHH
T ss_pred EeEeChhHhhhhhhhcCCCceEEEeeCCCCCccCCCCccCcEee-CCEEEEEEEeCCCCCCCCCCCcEEEEHHHHHHHHH
Confidence 333333333222211 122344442 24699999999995 789999999875211 11223455666667776
Q ss_pred HHH
Q 013444 329 QFK 331 (443)
Q Consensus 329 ~l~ 331 (443)
+..
T Consensus 231 ~~~ 233 (237)
T 1gvz_A 231 ETI 233 (237)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 71
>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus scrofa} SCOP: b.47.1.2
Probab=99.45 E-value=7.9e-12 Score=118.05 Aligned_cols=186 Identities=20% Similarity=0.214 Sum_probs=115.9
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEE
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVL 204 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d---------g~~~~a~vv 204 (443)
-.|.+|.|...... .....|+|.+|+++ +|||+|||+... ..+.|.+.. .+.+..+-+
T Consensus 11 ~~Pw~v~l~~~~~~----~~~~~CgGtLI~~~-~VLTAAHC~~~~--------~~~~V~~G~~~~~~~~~~~~~~~v~~i 77 (241)
T 1bru_P 11 SWPWQVSLQYDSSG----QWRHTCGGTLVDQS-WVLTAAHCISSS--------RTYRVVLGRHSLSTNEPGSLAVKVSKL 77 (241)
T ss_dssp SSTTEEEEEEEETT----EEEEEEEEEEEETT-EEEECGGGCCTT--------SCEEEEESCSBSSSCCTTCEEEEEEEE
T ss_pred CcCcEEEEEEecCC----ceeeEEEeEEeeCC-EEEEcHHhcccC--------CceEEEEEcccccCCCCccEEEEEEEE
Confidence 35788888754211 01256999999988 999999999731 345566532 245555555
Q ss_pred eecCC---------CCEEEEEEcCCC----CCCccccCCCC-CCCCCCEEEEEecCCCC-----CCceEEEEEEeeecCc
Q 013444 205 NADFH---------SDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPHSL-----QNTVTAGIVSCVDRKS 265 (443)
Q Consensus 205 ~~d~~---------~DlAlLkl~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~-----~~~~t~G~Vs~~~~~~ 265 (443)
..|+. +|||||+|+.+. .+.|+.|.... .+..|+.+++.||.... ...+....+.-+....
T Consensus 78 ~~Hp~y~~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~i~~~~~ 157 (241)
T 1bru_P 78 VVHQDWNSNQLSNGNDIALLKLASPVSLTDKIQLGCLPAAGTILPNNYVCYVTGWGRLQTNGASPDILQQGQLLVVDYAT 157 (241)
T ss_dssp EECTTCCTTCGGGCCCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESCCSSTTSCCCSBCEEEEEEEECHHH
T ss_pred EECCCCCCCCCCCCCcEEEEEeCCCcccCCccCCcccCCCcCCCCCCCEEEEEEccccCCCCCCCccceeCEEEEecHHH
Confidence 55542 799999998763 35566675433 35689999999997632 1234444444443333
Q ss_pred cCCC--CC-CccceEEEEc----ccCCCCCccceeeec--CC--CEEEEEEEEee-cC---CCeEEEEeHHHHHHHHHHH
Q 013444 266 SDLG--LG-GMRREYLQTD----CAINAGNSGGPLVNI--DG--EIVGINIMKVA-AA---DGLSFAVPIDSAAKIIEQF 330 (443)
Q Consensus 266 ~~~~--~~-~~~~~~i~~d----~~i~~G~SGGPlvd~--~G--~VVGI~s~~~~-~~---~g~~~aIPi~~i~~~l~~l 330 (443)
+... +. ......|... ...|.|+|||||+-. +| .++||++++.. .. ..-+.+.-+...+++|++.
T Consensus 158 C~~~~~~~~~~~~~~~Ca~~~~~~~~C~GDSGgPL~~~~~~g~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~ 237 (241)
T 1bru_P 158 CSKPGWWGSTVKTNMICAGGDGIISSCNGDSGGPLNCQGANGQWQVHGIVSFGSSLGCNYYHKPSVFTRVSNYIDWINSV 237 (241)
T ss_dssp HTSTTTTGGGCCTTEEEECCSSSSBCCTTCTTCEEEEECTTSCEEEEEEEEECBTTBSSCTTCCEEEEEGGGSHHHHHHH
T ss_pred hCcccccCCcCCCceEeecCCCCCccCCCCCCCcEEEECCCCCEEEEEEEEEcCCCCCCCCCCCcEEEEHHHhHHHHHHH
Confidence 2211 11 1123355543 357999999999953 46 79999999752 11 2235556677777777765
Q ss_pred HH
Q 013444 331 KK 332 (443)
Q Consensus 331 ~~ 332 (443)
.+
T Consensus 238 i~ 239 (241)
T 1bru_P 238 IA 239 (241)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 72
>3fan_A Non-structural protein; chymotrypsin-like, N-terminal beta-barrels, C-terminal alpha-beta extra domain; 1.90A {Porcine respiratory and reproductivesyndrome virus} PDB: 3fao_A
Probab=99.45 E-value=1.7e-13 Score=123.55 Aligned_cols=129 Identities=22% Similarity=0.286 Sum_probs=82.7
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEEEEeecCCCCEE
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGTVLNADFHSDIA 213 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~dg~~~~a~vv~~d~~~DlA 213 (443)
..+-+|.|.... .+.|+||.|+.+++||||+|||.+. +..++ .++.++. +.+|+..|+|
T Consensus 17 ~~~N~v~V~G~~--------~GsGt~F~i~g~~~VvTA~HVVg~~---------~~vVt-~~g~r~~---~~f~~~~D~A 75 (213)
T 3fan_A 17 PSLNTVNVVGSS--------MGSGGVFTIDGKIKCVTAAHVLTGN---------SARVS-GVGFNQM---LDFDVKGDFA 75 (213)
T ss_dssp CCTTEEEEESSS--------EEEEEEEEETTEEEEEEEGGGSBTT---------EEEEE-ETTEEEE---EECEEETTEE
T ss_pred CCCCeEEEeecC--------CCceEEEEECCcEEEEEeccEeCCC---------CEEEe-cCCcEEE---EEecCCCcEE
Confidence 344566665432 3678999998777999999999873 33444 5566664 3679999999
Q ss_pred EEEEcC-CCCCCccccCCCCCCCCCCEEEEEecCCCCCCceEEEEEEeeecCccCCCCCCccceEEEEcccCCCCCccce
Q 013444 214 IVKINS-KTPLPAAKLGTSSKLCPGDWVVAMGCPHSLQNTVTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAGNSGGP 292 (443)
Q Consensus 214 lLkl~~-~~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGP 292 (443)
++++.. ...+|.++++... ..|...+..-+ ....|.+. . ...+.. ..+||||||
T Consensus 76 ll~i~~~~g~~P~lKlA~~~--~~G~a~~~~~~------gv~~G~i~----~----------~~al~~---T~pGdSGsP 130 (213)
T 3fan_A 76 IADCPNWQGVAPKAQFCEDG--WTGRAYWLTSS------GVEPGVIG----N----------GFAFCF---TACGDSGSP 130 (213)
T ss_dssp EEECTTCCSCCCBCCBCCTT--CCEEEEEEETT------EEEEEEEE----T----------TEEEES---SCCCSTTCE
T ss_pred EEEccCcCCCCCcceeeeee--ccCceEEEEcc------Cccccccc----c----------CCEEEe---cCCCCCCCc
Confidence 999953 5678888886422 22222222111 12233332 0 012222 268999999
Q ss_pred eeecCCCEEEEEEEEe
Q 013444 293 LVNIDGEIVGINIMKV 308 (443)
Q Consensus 293 lvd~~G~VVGI~s~~~ 308 (443)
|+|.+|+||||+...-
T Consensus 131 Vvn~dG~VIGVHt~s~ 146 (213)
T 3fan_A 131 VITEAGELVGVHTGSN 146 (213)
T ss_dssp EEETTSCEEEEEEC--
T ss_pred cCCCCCcEEEEEeccC
Confidence 9999999999998743
No 73
>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A {Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A
Probab=99.45 E-value=6.9e-12 Score=117.88 Aligned_cols=178 Identities=19% Similarity=0.244 Sum_probs=111.9
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEE
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVL 204 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d---------g~~~~a~vv 204 (443)
-.|.+|.|... +...|+|.+|+++ +|||+|||+.+. ...|.+.. .+.+..+-+
T Consensus 11 ~~Pw~v~l~~~--------~~~~CgGtLIs~~-~VLTAAHC~~~~---------~~~v~~G~~~~~~~~~~~~~~~v~~~ 72 (234)
T 1orf_A 11 SRPYMVLLSLD--------RKTICAGALIAKD-WVLTAAHCNLNK---------RSQVILGAHSITREEPTKQIMLVKKE 72 (234)
T ss_dssp SSTTEEEEECS--------SSCEEEEEEEETT-EEEECTTCCCCT---------TCEEEESCSBSSSCCTTCEEECEEEE
T ss_pred CCCeEEEEccC--------CceEEEEEEeeCC-EEEEchhcCCCC---------CceEEEeccccCcCCCceEEEEEEEE
Confidence 35788888742 1357999999988 999999999652 23344321 234555555
Q ss_pred eecC-------CCCEEEEEEcCCC----CCCccccCCCC-CCCCCCEEEEEecCCCC-----CCceEEEEEEeeecCccC
Q 013444 205 NADF-------HSDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPHSL-----QNTVTAGIVSCVDRKSSD 267 (443)
Q Consensus 205 ~~d~-------~~DlAlLkl~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~-----~~~~t~G~Vs~~~~~~~~ 267 (443)
..|+ .+|||||+++.+. .+.++.|.... .+..|+.++++||.... ...+....+..+....+.
T Consensus 73 ~~Hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~ 152 (234)
T 1orf_A 73 FPYPCYDPATREGDLKLLQLTEKAKINKYVTILHLPKKGDDVKPGTMCQVAGWGRTHNSASWSDTLREVEITIIDRKVCN 152 (234)
T ss_dssp EECTTCCTTTCTTCCEEEEESSCCCCSSSSCCCCCCSSCCCCCTTCEEEEEESSCSSSSSCCCSBCEEEEEEEECHHHHT
T ss_pred EcCCCCCCCCCCCCEEEEEECCcCccCCCeeeeecCCCcCCCCCCCEEEEEECCcCCCCCCccccceEeEEEeeCHHHcC
Confidence 5554 4699999998763 34566665433 34689999999997532 223444444444433332
Q ss_pred --CCCCCccc----eEEEEc-----ccCCCCCccceeeecCCCEEEEEEEEee-cC---CCeEEEEeHH-HHHHHHHHHH
Q 013444 268 --LGLGGMRR----EYLQTD-----CAINAGNSGGPLVNIDGEIVGINIMKVA-AA---DGLSFAVPID-SAAKIIEQFK 331 (443)
Q Consensus 268 --~~~~~~~~----~~i~~d-----~~i~~G~SGGPlvd~~G~VVGI~s~~~~-~~---~g~~~aIPi~-~i~~~l~~l~ 331 (443)
..+. ... ..+... ...|.|+|||||+- +|.++||++++.. .. ..-+.+.-+. ...+++++..
T Consensus 153 ~~~~~~-~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~GI~S~g~~~~C~~~~~p~vyt~v~~~~~~WI~~~~ 230 (234)
T 1orf_A 153 DRNHYN-FNPVIGMNMVCAGSLRGGRDSCNGDSGSPLLC-EGVFRGVTSFGLENKCGDPRGPGVYILLSKKHLNWIIMTI 230 (234)
T ss_dssp STTTTT-TTTCCCTTEEEEECSSCCCBCCTTCTTCEEEE-TTEEEEEEEECCTTCTTCTTSCEEEEECCHHHHHHHHHHH
T ss_pred Cccccc-cCCccCCCEEEecCCCCCCcCCCCCCCCeEEE-CCEEEEEEEEcCCCCCCCCCCCCEEEEchHHHHHHHHHHH
Confidence 1111 111 445542 35799999999995 7899999999762 11 1234455565 6777776654
No 74
>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} SCOP: b.47.1.0 PDB: 4djz_B
Probab=99.44 E-value=5.5e-12 Score=119.23 Aligned_cols=189 Identities=19% Similarity=0.247 Sum_probs=117.1
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCC--------CCCCceEEEEeCC---------C
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSR--------ALPKGKVDVTLQD---------G 196 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~--------~~~~~~i~V~~~d---------g 196 (443)
-.|.+|.|.... +...|+|.+|+++ +|||+|||+.+..... ......+.|.+.. .
T Consensus 11 ~~Pw~v~l~~~~-------~~~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~ 82 (251)
T 3gov_B 11 TTPWIAMLSHLN-------GQPFCGGSLLGSS-WIVTAAHCLHQSLDPKDPTLRDSDLLSPSDFKIILGKHWRLRSDENE 82 (251)
T ss_dssp SCTTEEEEEETT-------CCEEEEEEEETTT-EEEECGGGGBCCCCTTSCCCCGGGBCCGGGEEEEESCCBSSSCCSSC
T ss_pred CcCeEEEEeccC-------CCeeEEEEEecCC-EEEECHhhccccccccccccccccccccccEEEEecceeccCCCCcc
Confidence 357888886432 2256999999988 9999999997531110 0123456666542 2
Q ss_pred cEEEEEEEeecCC-------CCEEEEEEcCC----CCCCccccCCCCCCCCCCEEEEEecCCCC----CCceEEEEEEee
Q 013444 197 RTFEGTVLNADFH-------SDIAIVKINSK----TPLPAAKLGTSSKLCPGDWVVAMGCPHSL----QNTVTAGIVSCV 261 (443)
Q Consensus 197 ~~~~a~vv~~d~~-------~DlAlLkl~~~----~~~~~~~l~~s~~~~~G~~V~~iG~p~~~----~~~~t~G~Vs~~ 261 (443)
+.+..+-+..|+. +|||||+|+.+ ..+.|+.|.. .....|+.+++.||.... ...+....+.-+
T Consensus 83 ~~~~v~~i~~hp~y~~~~~~~DIAll~L~~~~~~~~~v~picLp~-~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~ 161 (251)
T 3gov_B 83 QHLGVKHTTLHPQYDPNTFENDVALVELLESPVLNAFVMPICLPE-GPQQEGAMVIVSGWGKQFLQRFPETLMEIEIPIV 161 (251)
T ss_dssp EEECEEEEEECTTCBTTTTBTCCEEEEESSCCCCSSSCCCCBCCS-SCCCTTCEEEEEECSCCTTSCCCSBCEEEEEEEE
T ss_pred eEeeeEEEEECCCCCCCCCCCCEEEEEeCCcccCCCceEEeECCC-CCCCCCCEEEEEcCCCCCCCCCCccceEEeeEEE
Confidence 4455555666654 69999999875 2345777754 344789999999997642 223333334333
Q ss_pred ecCccCCCC----CCccceEEEEc-----ccCCCCCccceeeec---CC--CEEEEEEEEeecC--CCeEEEEeHHHHHH
Q 013444 262 DRKSSDLGL----GGMRREYLQTD-----CAINAGNSGGPLVNI---DG--EIVGINIMKVAAA--DGLSFAVPIDSAAK 325 (443)
Q Consensus 262 ~~~~~~~~~----~~~~~~~i~~d-----~~i~~G~SGGPlvd~---~G--~VVGI~s~~~~~~--~g~~~aIPi~~i~~ 325 (443)
....+...+ ......++... ...|.|+|||||+-. +| .++||++++..-. ..-+.+..+...++
T Consensus 162 ~~~~C~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~ 241 (251)
T 3gov_B 162 DHSTCQKAYAPLKKKVTRDMICAGEKEGGKDACAGDSGGPMVTLNRERGQWYLVGTVSWGDDCGKKDRYGVYSYIHHNKD 241 (251)
T ss_dssp CHHHHHHHTTTTTCCCCTTEEEESCTTCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSCSSCCEEEEETTTTHH
T ss_pred CHHHhhhhhhhccCCCCCCcEEecCCCCCCccCCCCCCCeEEeeeCCCCcEEEEEEEEECCCCCCCCCCEEEEEHHHhHH
Confidence 322221111 11223355542 467999999999953 34 5999999974311 12355677777788
Q ss_pred HHHHHH
Q 013444 326 IIEQFK 331 (443)
Q Consensus 326 ~l~~l~ 331 (443)
+|++..
T Consensus 242 WI~~~~ 247 (251)
T 3gov_B 242 WIQRVT 247 (251)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 887654
No 75
>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG; 1.70A {Homo sapiens}
Probab=99.44 E-value=5.5e-12 Score=118.71 Aligned_cols=178 Identities=19% Similarity=0.160 Sum_probs=110.9
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEE
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVL 204 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d---------g~~~~a~vv 204 (443)
-.|.+|.|.... ...|+|.+|+++ +|||+|||+.+ .+.|.+.. .+.+..+-+
T Consensus 11 ~~Pw~v~l~~~~--------~~~CgGsLIs~~-~VLTAAHC~~~----------~~~v~~G~~~~~~~~~~~~~~~v~~~ 71 (238)
T 1spj_A 11 SQPWQAALYHFS--------TFQCGGILVHRQ-WVLTAAHCISD----------NYQLWLGRHNLFDDENTAQFVHVSES 71 (238)
T ss_dssp SSTTEEEEEETT--------EEEEEEEEEETT-EEEECGGGCCS----------SEEEEESCSBTTSCCTTCEEECEEEE
T ss_pred CCCcEEEEEeCC--------CeeEEEEEecCC-EEEEcHHhCCC----------CceEEEEeccccCCCCCceEEEEEEE
Confidence 357888886421 256999999987 99999999964 23344321 233444444
Q ss_pred eecC------------------CCCEEEEEEcCCCC-----CCccccCCCCCCCCCCEEEEEecCCCC------CCceEE
Q 013444 205 NADF------------------HSDIAIVKINSKTP-----LPAAKLGTSSKLCPGDWVVAMGCPHSL------QNTVTA 255 (443)
Q Consensus 205 ~~d~------------------~~DlAlLkl~~~~~-----~~~~~l~~s~~~~~G~~V~~iG~p~~~------~~~~t~ 255 (443)
..|+ .+|||||+++.+.. +.++.|.. .....|+.++++||.... ...+..
T Consensus 72 ~~hp~y~~~~~~~~~~~~~~~~~~DIALl~L~~~~~~~~~~v~pi~L~~-~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~ 150 (238)
T 1spj_A 72 FPHPGFNMSLLENHTRQADEDYSHDLMLLRLTEPADTITDAVKVVELPT-EEPEVGSTCLASGWGSIEPENFSFPDDLQC 150 (238)
T ss_dssp EECTTSCGGGGCC--CTTTCCCTTCCEEEEESSCCCCSSTTCCCCCCCS-SCCCTTCEEEEEESSCSSSSSCCCCSBCEE
T ss_pred EcCCCccccccccccccccccCCCCeEEEEECccccccCCceeeccCCC-CCCCCCCEEEEEecCCCCCCCCCCcCcccE
Confidence 4443 35999999987533 45677754 445679999999997532 123344
Q ss_pred EEEEeeecCccCCCCC-CccceEEEEc-----ccCCCCCccceeeecCCCEEEEEEEEeecC---CCeEEEEeHHHHHHH
Q 013444 256 GIVSCVDRKSSDLGLG-GMRREYLQTD-----CAINAGNSGGPLVNIDGEIVGINIMKVAAA---DGLSFAVPIDSAAKI 326 (443)
Q Consensus 256 G~Vs~~~~~~~~~~~~-~~~~~~i~~d-----~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~---~g~~~aIPi~~i~~~ 326 (443)
..+.-+....+...+. ......+... ...|.|+|||||+. ++.++||++++.... ..-+.+.-+...+++
T Consensus 151 ~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~W 229 (238)
T 1spj_A 151 VDLKILPNDECKKAHVQKVTDFMLCVGHLEGGKDTCVGDSGGPLMC-DGVLQGVTSWGYVPCGTPNKPSVAVRVLSYVKW 229 (238)
T ss_dssp EEEEEECHHHHHHHCSSCCCTTEEEEECTTCSSBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEEGGGGHHH
T ss_pred EEEeecCHHHhhhhccCCCCCCeEEeeCCCCCCCCCCCCCCCcEEE-cCEEEEEEEeCCCCCCCCCCCeEEEEHHHhHHH
Confidence 4443333322211111 1122345442 46799999999995 689999999974321 223556777777788
Q ss_pred HHHHHH
Q 013444 327 IEQFKK 332 (443)
Q Consensus 327 l~~l~~ 332 (443)
|++..+
T Consensus 230 I~~~i~ 235 (238)
T 1spj_A 230 IEDTIA 235 (238)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 776554
No 76
>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease, catalytic intermediate, atomic resolution, hydrolase-hydrolase inhibitor complex; 0.94A {Sus scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B* 1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A* 1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A* 1esa_A 1esb_A* 1est_A* ...
Probab=99.44 E-value=9.5e-12 Score=117.37 Aligned_cols=186 Identities=15% Similarity=0.162 Sum_probs=113.7
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEE
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVL 204 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d---------g~~~~a~vv 204 (443)
-.|.+|.|....+.. ....|+|.+|+++ +|||+|||+... ..+.|.+.. .+.+..+-+
T Consensus 11 ~~Pw~v~l~~~~~~~----~~~~CgGsLI~~~-~VLTAAHC~~~~--------~~~~v~~G~~~~~~~~~~~~~~~v~~i 77 (240)
T 1gvk_B 11 SWPSQISLQYRSGSS----WAHTCGGTLIRQN-WVMTAAHCVDRE--------LTFRVVVGEHNLNQNNGTEQYVGVQKI 77 (240)
T ss_dssp SCTTEEEEEEEETTE----EEEEEEEEEEETT-EEEECGGGGCSC--------CCEEEEESCSBTTSCCSCCEEEEEEEE
T ss_pred CcCEEEEEEecCCCc----cCceEEEEEeeCC-EEEECHHHCCCC--------cceEEEECCeecccCCCcceEEEEEEE
Confidence 357888887422110 0256999999988 999999999763 345565532 234555555
Q ss_pred eecC---------CCCEEEEEEcCCC----CCCccccCCCC-CCCCCCEEEEEecCCCCC-----CceEEEEEEeeecCc
Q 013444 205 NADF---------HSDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPHSLQ-----NTVTAGIVSCVDRKS 265 (443)
Q Consensus 205 ~~d~---------~~DlAlLkl~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~~-----~~~t~G~Vs~~~~~~ 265 (443)
..|+ .+|||||+++.+. .+.++.|.... .+..|+.++++||..... ..+....+..+....
T Consensus 78 ~~Hp~y~~~~~~~~~DIALl~L~~~v~~~~~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~ 157 (240)
T 1gvk_B 78 VVHPYWNTDDVAAGYDIALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQAYLPTVDYAI 157 (240)
T ss_dssp EECTTCCTTCGGGCCCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCCEEEEESCBSSTTCCBCSBCEEEECCEECHHH
T ss_pred EECCCCCCCCCCCCCcEEEEEECCccccCCCccceecCCCCCCCCCCCEEEEEecCcCCCCCCcchhccEEEEEEEcHHH
Confidence 5554 5699999998763 34566665433 356799999999975421 223333333232222
Q ss_pred cCCC--CC-CccceEEEEc----ccCCCCCccceeeec-CC--CEEEEEEEEee-c---CCCeEEEEeHHHHHHHHHHHH
Q 013444 266 SDLG--LG-GMRREYLQTD----CAINAGNSGGPLVNI-DG--EIVGINIMKVA-A---ADGLSFAVPIDSAAKIIEQFK 331 (443)
Q Consensus 266 ~~~~--~~-~~~~~~i~~d----~~i~~G~SGGPlvd~-~G--~VVGI~s~~~~-~---~~g~~~aIPi~~i~~~l~~l~ 331 (443)
+... +. .....++... ...|.|+|||||+-. +| .++||++++.. . ...-+.+.-+....++|++..
T Consensus 158 C~~~~~~~~~~~~~~~Ca~~~~~~~~C~GDSGgPL~~~~~g~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~i 237 (240)
T 1gvk_B 158 CSSSSYWGSTVKNSMVCAGGDGVRSGCQGDSGGPLHCLVNGQYAVHGVTSFVSRLGCNVTRKPTVFTRVSAYISWINNVI 237 (240)
T ss_dssp HTSTTTTGGGCCTTEEEECCSSSCBCCTTCTTCEEEEEETTEEEEEEEEEECBTTBSSCTTCCEEEEEGGGSHHHHHHHH
T ss_pred hccccccCccCCcceEeecCCCCCcccCCCCcCceEEEECCcEEEEEEEEEeCCCCCCCCCCCcEEEeHHHHHHHHHHHH
Confidence 2111 11 1123355543 457999999999843 56 79999999752 1 122355566777777776654
Q ss_pred H
Q 013444 332 K 332 (443)
Q Consensus 332 ~ 332 (443)
+
T Consensus 238 ~ 238 (240)
T 1gvk_B 238 A 238 (240)
T ss_dssp H
T ss_pred h
Confidence 3
No 77
>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate conformations, alternative splicing, glycoprotein, hydrolase, protease, secreted; HET: K7J; 1.00A {Homo sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A
Probab=99.43 E-value=4e-12 Score=118.79 Aligned_cols=178 Identities=19% Similarity=0.207 Sum_probs=110.8
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC-------CcEEEEEEEee
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD-------GRTFEGTVLNA 206 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d-------g~~~~a~vv~~ 206 (443)
-.|.+|.|.. + ....|+|.+|+++ +|||+|||+.. .+.|.+.. .+.+..+-+..
T Consensus 11 ~~Pw~v~l~~--~------~~~~CgGtLI~~~-~VLTAAHC~~~----------~~~v~~G~~~~~~~~~~~~~v~~~~~ 71 (224)
T 2qxi_A 11 SHPWQVALLS--G------NQLHCGGVLVNER-WVLTAAHCKMN----------EYTVHLGSDTLGDRRAQRIKASKSFR 71 (224)
T ss_dssp SCTTEEEEEE--T------TEEEEEEEEEETT-EEEECGGGCCS----------CEEEEESCSBTTCTTSEEEEECEEEE
T ss_pred CCCCEEEEee--C------CCeEEEEEEecCC-EEEEhHHcCCC----------CcEEEEeeeecCCCccEEEEEEEEEE
Confidence 3578888841 1 1136999999988 99999999842 34455432 24455555555
Q ss_pred cC-------CCCEEEEEEcCCC----CCCccccCCCCCCCCCCEEEEEecCCCC------CCceEEEEEEeeecCccCCC
Q 013444 207 DF-------HSDIAIVKINSKT----PLPAAKLGTSSKLCPGDWVVAMGCPHSL------QNTVTAGIVSCVDRKSSDLG 269 (443)
Q Consensus 207 d~-------~~DlAlLkl~~~~----~~~~~~l~~s~~~~~G~~V~~iG~p~~~------~~~~t~G~Vs~~~~~~~~~~ 269 (443)
|+ .+|||||+++.+. .+.++.|... ....|+.++++||.... ...+....+..+....+...
T Consensus 72 Hp~y~~~~~~~DIALl~L~~~~~~~~~v~picL~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~ 150 (224)
T 2qxi_A 72 HPGYSTQTHVNDLMLVKLNSQARLSSMVKKVRLPSR-CEPPGTTCTVSGWGTTTSPDVTFPSDLMCVDVKLISPQDCTKV 150 (224)
T ss_dssp CTTCCTTTCTTCCEEEECSSCCCCBTTBCCCCCCSS-CCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEEECHHHHHHH
T ss_pred CCCCCCCCCcCcEEEEEeCCCCcCCCceeeEECCCC-CCCCCCEEEEEeCCccCCCCCCCChhheEEEeeecCHHHhhHH
Confidence 54 3699999998763 3567777543 45789999999997642 12233333333322221100
Q ss_pred CC-CccceEEEEc-----ccCCCCCccceeeecCCCEEEEEEEEeecC---CCeEEEEeHHHHHHHHHHHHH
Q 013444 270 LG-GMRREYLQTD-----CAINAGNSGGPLVNIDGEIVGINIMKVAAA---DGLSFAVPIDSAAKIIEQFKK 332 (443)
Q Consensus 270 ~~-~~~~~~i~~d-----~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~---~g~~~aIPi~~i~~~l~~l~~ 332 (443)
+. ......+... ...|.|+|||||+- +|+++||++++.... ..-+.+.-+...++++++..+
T Consensus 151 ~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 221 (224)
T 2qxi_A 151 YKDLLENSMLCAGIPDSKKNACNGDSGGPLVC-RGTLQGLVSWGTFPCGQPNDPGVYTQVCKFTKWINDTMK 221 (224)
T ss_dssp HGGGCCTTEEEEECTTCCCBCCTTCTTCEEEE-TTEEEEEEEECCSSSCCTTCCEEEEEGGGSHHHHHHHHH
T ss_pred hcCcCCCCeEEecCCCCCCccCCCCccccEEE-CCEEEEEEEeCCCCCCCCCCCeEEEEHHHHHHHHHHHHh
Confidence 00 0112345442 35799999999995 789999999873221 223556777777777776554
No 78
>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor; mutagenically deglycosyalted human plasma kallikrein protease domain; HET: BAM; 1.40A {Homo sapiens} PDB: 2anw_A*
Probab=99.42 E-value=1e-11 Score=117.22 Aligned_cols=188 Identities=16% Similarity=0.127 Sum_probs=115.2
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEE
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVL 204 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d---------g~~~~a~vv 204 (443)
-.|.+|.|...... ....|+|.+|+++ +|||+|||+.+... ...+.|.+.. ...+..+-+
T Consensus 11 ~~Pw~v~l~~~~~~-----~~~~CgGtLI~~~-~VLTAAHC~~~~~~-----~~~~~v~~G~~~~~~~~~~~~~~~v~~i 79 (241)
T 2any_A 11 EWPWQVSLQVKLTA-----QRHLCGGSLIGHQ-WVLTAAHCFDGLPL-----QDVWRIYSGILELSDITKDTPFSQIKEI 79 (241)
T ss_dssp SSTTEEEEEEESSS-----EEEEEEEEEEETT-EEEECGGGGSSCCC-----STTEEEECSCSBGGGCCTTSCCBCEEEE
T ss_pred CCCcEEEEEEEcCC-----CceEEEEEEecCC-EEEECHHHcCCCCC-----CccEEEEeeeeeccccccCceEEeeEEE
Confidence 35788888754311 2256999999988 99999999976321 1234454421 233444445
Q ss_pred eecC-------CCCEEEEEEcCCC----CCCccccCCCC-CCCCCCEEEEEecCCCCC-----CceEEEEEEeeecCccC
Q 013444 205 NADF-------HSDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPHSLQ-----NTVTAGIVSCVDRKSSD 267 (443)
Q Consensus 205 ~~d~-------~~DlAlLkl~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~~-----~~~t~G~Vs~~~~~~~~ 267 (443)
..|+ .+|||||+|+.+. .+.|+.|.... ....|+.++++||..... ..+....+..+....+.
T Consensus 80 ~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~ 159 (241)
T 2any_A 80 IIHQNYKVSEGNHDIALIKLQAPLEYTEFQKPISLPSKGDTSTIYTNCWVTGWGFSKEKGEIQNILQKVNIPLVTNEECQ 159 (241)
T ss_dssp EECTTCCTTSSSSCCEEEEESSCCCCBTTBCCCCCCCSSCCSTTCSEEEEEESSCSSTTCCCCSBCEEEEEEEECHHHHH
T ss_pred EECCCCCCCCCCCCeEEEEeCCcccCCCCcceeEcCCcccCCCCCCeEEEEecccCCCCCCcCchhheeEeEEeCHHHhh
Confidence 5554 3699999998763 34566665432 356799999999976422 23334444333332222
Q ss_pred CCCC--CccceEEEEc-----ccCCCCCccceeeec-CC--CEEEEEEEEeec--CCCeEEEEeHHHHHHHHHHHHH
Q 013444 268 LGLG--GMRREYLQTD-----CAINAGNSGGPLVNI-DG--EIVGINIMKVAA--ADGLSFAVPIDSAAKIIEQFKK 332 (443)
Q Consensus 268 ~~~~--~~~~~~i~~d-----~~i~~G~SGGPlvd~-~G--~VVGI~s~~~~~--~~g~~~aIPi~~i~~~l~~l~~ 332 (443)
..+. ......+... ...|.|+|||||+-. +| .++||++++..- ...-+.+.-+...+++|++..+
T Consensus 160 ~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~l~GI~S~g~~c~~~~~p~vyt~V~~~~~WI~~~~~ 236 (241)
T 2any_A 160 KRYQDYKITQRMVCAGYKEGGKDACKGDSGGPLVCKHNGMWRLVGITSWGEGCARREQPGVYTKVAEYMDWILEKTQ 236 (241)
T ss_dssp TTSCTTCSCTTEEEECCTTCCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHHS
T ss_pred hHhccCCCCcCcEeecCCCCCCccCCCCCCCcEEEEECCEEEEEEEEEecCCCCCCCCCeEEEEHHHhHHHHHHHhh
Confidence 1111 1223455542 357999999999954 45 699999987531 1224556777778888877654
No 79
>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2
Probab=99.42 E-value=8e-12 Score=117.50 Aligned_cols=183 Identities=16% Similarity=0.196 Sum_probs=112.4
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEE
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVL 204 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d---------g~~~~a~vv 204 (443)
-.|.+|.|....... ....|+|.+|+++ +|||+|||+.+. ..+.|.+.. .+.+..+-+
T Consensus 11 ~~Pw~v~l~~~~~~~----~~~~CgGtLIs~~-~VLTAAHC~~~~--------~~~~V~~G~~~~~~~~~~~~~~~v~~i 77 (236)
T 1elt_A 11 SWPWQISLQYKSGSS----YYHTCGGSLIRQG-WVMTAAHCVDSA--------RTWRVVLGEHNLNTNEGKEQIMTVNSV 77 (236)
T ss_dssp SSTTEEEEEEEETTE----EEEEEEEEEEETT-EEEECHHHHSSC--------CCEEEEESCSBTTSCCSCCEEECEEEE
T ss_pred CCCCEEEEEEecCCc----eeeEEEEEEEeCC-EEEECHHhhCCc--------CceEEEEccccCCCCCCCcEEEEEEEE
Confidence 357888887642110 1156999999988 999999999763 345566542 234555555
Q ss_pred eecC---------CCCEEEEEEcCCC----CCCccccCCCC-CCCCCCEEEEEecCCCCC-----CceEEEEEEeeecCc
Q 013444 205 NADF---------HSDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPHSLQ-----NTVTAGIVSCVDRKS 265 (443)
Q Consensus 205 ~~d~---------~~DlAlLkl~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~~-----~~~t~G~Vs~~~~~~ 265 (443)
..|+ .+|||||+++.+. .+.++.|.... .+..|+.++++||+.... ..+....+..+....
T Consensus 78 ~~hp~y~~~~~~~~~DiALl~L~~~~~~~~~v~picL~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~ 157 (236)
T 1elt_A 78 FIHSGWNSDDVAGGYDIALLRLNTQASLNSAVQLAALPPSNQILPNNNPCYITGWGKTSTGGPLSDSLKQAWLPSVDHAT 157 (236)
T ss_dssp EECTTCCTTCGGGCCCCEEEEESSCCCCSSSCCCCCCCCTTCCCCTTCCEEEEESCCSSTTCCCCSBCEEEECCEECHHH
T ss_pred EECCCCCCCCCCCCccEEEEECCCCCccCCcEEeccCCCccccCCCCCEEEEEeCCCcCCCCCcChhheEeEeeecCHHH
Confidence 5554 5699999998753 35667775433 356799999999986421 223333333333222
Q ss_pred cCCC--CC-CccceEEEEc---ccCCCCCccceeeec-CC--CEEEEEEEEee-cC---CCeEEEEeHHHHHHHHHH
Q 013444 266 SDLG--LG-GMRREYLQTD---CAINAGNSGGPLVNI-DG--EIVGINIMKVA-AA---DGLSFAVPIDSAAKIIEQ 329 (443)
Q Consensus 266 ~~~~--~~-~~~~~~i~~d---~~i~~G~SGGPlvd~-~G--~VVGI~s~~~~-~~---~g~~~aIPi~~i~~~l~~ 329 (443)
+... +. ......+... ...|.|+|||||+-. +| .++||++++.. .. ..-+.+.-+....++|++
T Consensus 158 C~~~~~~~~~~~~~~~Ca~~~~~~~C~GDSGgPL~~~~~g~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~ 234 (236)
T 1elt_A 158 CSSSGWWGSTVKTTMVCAGGGANSGCNGDSGGPLNCQVNGSYYVHGVTSFVSSSGCNASKKPTVFTRVSAYISWMNG 234 (236)
T ss_dssp HTSTTTTGGGSCTTEEEECCSSCBCCTTCTTCEEEEEETTEEEEEEEEEECCSSCTTCTTCCEEEEEGGGGHHHHHH
T ss_pred hccccccCCcCCcceEEecCCCCccCCCCCCCeeEEEECCEEEEEEEEEEeCCCCCCCCCCCeEEEEHHHhHHHHHh
Confidence 2211 11 1122345543 457999999999854 56 79999998742 11 223455666666666654
No 80
>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen; HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A 3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A
Probab=99.42 E-value=1.2e-11 Score=115.25 Aligned_cols=170 Identities=19% Similarity=0.175 Sum_probs=107.4
Q ss_pred EEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC-------CcEEEEEEEeecCC-------CCEEEEEEcCCC
Q 013444 156 IGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD-------GRTFEGTVLNADFH-------SDIAIVKINSKT 221 (443)
Q Consensus 156 ~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d-------g~~~~a~vv~~d~~-------~DlAlLkl~~~~ 221 (443)
.|+|.+|+++ +|||+|||+.+... ...+.|.+.. ...+...-+..|+. +|||||+++.+.
T Consensus 21 ~CgGtLI~~~-~VLTAAHC~~~~~~-----~~~~~v~~G~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v 94 (224)
T 3beu_A 21 GCGGALYAQD-IVLTAAHCVSGSGN-----NTSITATGGVVDLQSSSAVKVRSTKVLQAPGFTKETYGKDWALIKLAQPI 94 (224)
T ss_dssp TEEEEEEETT-EEEECGGGSCSSEE-----BCCCEEEESCSBTTCTTCEEEEEEEEEECTTCCCGGGSCCCEEEEESSCC
T ss_pred ceeEEEeeCC-EEEEChhhcCCCCC-----cceEEEEeeEeecCCCCceEEEEEEEEeCCCcCCCcCCCCEEEEEeCCCC
Confidence 3999999987 99999999975310 1234455431 24555555666654 599999999877
Q ss_pred CCCccccCCCCCCCCCCEEEEEecCCCCC-----CceEEEEEEeeecCccC--CCCCCccceEEEEc-----ccCCCCCc
Q 013444 222 PLPAAKLGTSSKLCPGDWVVAMGCPHSLQ-----NTVTAGIVSCVDRKSSD--LGLGGMRREYLQTD-----CAINAGNS 289 (443)
Q Consensus 222 ~~~~~~l~~s~~~~~G~~V~~iG~p~~~~-----~~~t~G~Vs~~~~~~~~--~~~~~~~~~~i~~d-----~~i~~G~S 289 (443)
.++++.+.... ...+..++++||..... ..+....+.-+....+. +.........+... ...|.|+|
T Consensus 95 ~~~~i~l~~~~-~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDs 173 (224)
T 3beu_A 95 NQPTLKIATTT-AYNQGTFTVAGWGANREGGSQQRYLLKANVPFVSDAACRSSSSFILVANEMICAGYDTKQEDTCQGDS 173 (224)
T ss_dssp CSCCCEECCSS-TTSSSEEEEEESSCSSTTCCCCSBCEEEEEEEECHHHHHHHCSSCCCGGGEEEECCSSSSCBCCTTCT
T ss_pred CCCcccccccc-ccCCCEEEEEecCccCCCCcccceeeEeeCcccCHHHhhhhcCCccCCCCeEEeccCCCCCcCCCCcC
Confidence 67777776543 33566899999976422 23344444333322221 11111223455542 36799999
Q ss_pred cceeeecC--C--CEEEEEEEEeecC--CCeEEEEeHHHHHHHHHHHHH
Q 013444 290 GGPLVNID--G--EIVGINIMKVAAA--DGLSFAVPIDSAAKIIEQFKK 332 (443)
Q Consensus 290 GGPlvd~~--G--~VVGI~s~~~~~~--~g~~~aIPi~~i~~~l~~l~~ 332 (443)
||||+-.+ | .++||++++..-. ..-+.+.-+....++|++..+
T Consensus 174 GgPl~~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~~ 222 (224)
T 3beu_A 174 GGPMFRKDNADEWVQVGIVSWGEGCARKGKYGVYTEVSTFASAIASAAR 222 (224)
T ss_dssp TCEEEEECTTSCEEEEEEEEEESSSSCTTCCEEEEEHHHHHHHHHHHHT
T ss_pred CCeeEEecCCCCEEEEEEeccCCCCCCCCCCeEEEEHHHHHHHHHHHHh
Confidence 99999543 3 6899999975311 234566788888888877653
No 81
>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase, secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A 2zgj_A
Probab=99.42 E-value=9.7e-12 Score=117.48 Aligned_cols=183 Identities=17% Similarity=0.217 Sum_probs=114.1
Q ss_pred CCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC------CcEEEEEEEeecC
Q 013444 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD------GRTFEGTVLNADF 208 (443)
Q Consensus 135 ~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d------g~~~~a~vv~~d~ 208 (443)
.|.+|.|... +...|+|.+|+++ +|||+|||+.+.. ..+.|.+.. +..+..+-+..|+
T Consensus 12 ~Pw~v~l~~~--------~~~~CgGtLIs~~-~VLTAAHC~~~~~-------~~~~v~~G~~~~~~~~~~~~v~~i~~Hp 75 (240)
T 2zgc_A 12 RPYMASLQRN--------GSHLCGGVLVHPK-WVLTAAHCLAQRM-------AQLRLVLGLHTLDSPGLTFHIKAAIQHP 75 (240)
T ss_dssp STTEEEEEET--------TEEEEEEEEEETT-EEEECGGGGCSCG-------GGEEEEESCSBSSSCCEEEEEEEEEECT
T ss_pred cCcEEEEEeC--------CCeEEEEEEEcCC-EEEEcHHhcCCCC-------CCEEEEecccccCCCCeEEEEEEEEECC
Confidence 5788888752 1257999999988 9999999997631 245666542 2455555454443
Q ss_pred --------CCCEEEEEEcCCC----CCCccccCCCC-CCCCCCEEEEEecCCCCC-----CceEEEEEEeeecCccCC--
Q 013444 209 --------HSDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPHSLQ-----NTVTAGIVSCVDRKSSDL-- 268 (443)
Q Consensus 209 --------~~DlAlLkl~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~~-----~~~t~G~Vs~~~~~~~~~-- 268 (443)
.+|||||+|+.+. .+.|+.|.... .+..|+.++++||..... ..+....+..+....+..
T Consensus 76 ~y~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~ 155 (240)
T 2zgc_A 76 RYKPVPALENDLALLQLDGKVKPSRTIRPLALPSKRQVVAAGTRCSMAGWGLTHQGGRLSRVLRELDLQVLDTRMCNNSR 155 (240)
T ss_dssp TCBCTTSCBSCCEEEEESSCCCCCSSCCCCCCCCTTCCCCTTCEEEEEECCBSSTTCCBCSBCEEEEEEECCHHHHTSTT
T ss_pred CCCCCCCCcccEEEEEeCCcccCCCceeeeEcCCCCCCCCCCCEEEEEECCcccCCCCcCceeeeeeeeecCHHHhCCcc
Confidence 4699999998753 35567775433 356899999999975421 233333343333322221
Q ss_pred CCC-CccceEEEEc-----ccCCCCCccceeeecC-CCEEEEEEEEeecC---CCeEEEEeHHHHHHHHHHHHHc
Q 013444 269 GLG-GMRREYLQTD-----CAINAGNSGGPLVNID-GEIVGINIMKVAAA---DGLSFAVPIDSAAKIIEQFKKN 333 (443)
Q Consensus 269 ~~~-~~~~~~i~~d-----~~i~~G~SGGPlvd~~-G~VVGI~s~~~~~~---~g~~~aIPi~~i~~~l~~l~~~ 333 (443)
.+. ......+... ...|.|+|||||+-.+ ..++||++++.... ..-+.+.-+...+++|++..+.
T Consensus 156 ~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~~~~ 230 (240)
T 2zgc_A 156 FWNGSLSPSMVCLAADSKDQAPCKGDSGGPLVCGKGRVLAGVLSFSSRVCTDIFKPPVATAVAPYVSWIRKVTGR 230 (240)
T ss_dssp TTTTCCCTTEEEEECSSTTCBCCTTCTTCEEEETTTTEEEEEECCCCSSTTCTTSCCEEEESGGGHHHHHHHHCC
T ss_pred ccCCCCCCceEeeccCCCCCccCCCCccCeeEECCCCEEEEEEEECCCCCCCCCCCcEEEEHHHhHHHHHHHHhh
Confidence 111 1123345542 3579999999999533 28999999873221 1234456677777888776543
No 82
>2asu_B Hepatocyte growth factor-like protein; serine proteinase, beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens}
Probab=99.42 E-value=8e-12 Score=117.50 Aligned_cols=185 Identities=17% Similarity=0.229 Sum_probs=113.8
Q ss_pred CCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC-----------CcEEEEEE
Q 013444 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD-----------GRTFEGTV 203 (443)
Q Consensus 135 ~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d-----------g~~~~a~v 203 (443)
.|.+|.|.... +...|+|.+|+++ +|||+|||+.+... ....+.|.+.. .+.+...-
T Consensus 9 ~Pw~v~l~~~~-------~~~~CgGtLI~~~-~VLTAAHC~~~~~~----~~~~~~v~~G~~~~~~~~~~~~~~~~~v~~ 76 (234)
T 2asu_B 9 SPWTVSLRNRQ-------GQHFCGGSLVKEQ-WILTARQCFSSCHM----PLTGYEVWLGTLFQNPQHGEPSLQRVPVAK 76 (234)
T ss_dssp CTTEEEEECTT-------SCEEEEEEEEETT-EEEEEGGGSSCTTC----CCTTCEEEESCSBSSCCTTCTTCEEEEEEE
T ss_pred CcceEEeeccC-------CCEEEEEEEEeCC-EEEECHHHcCCCCC----CcccEEEEEeeeeccCCCCCCceEEEEEEE
Confidence 57888886531 2367999999988 99999999965311 01234454431 23455555
Q ss_pred EeecC-CCCEEEEEEcCCC----CCCccccCCCC-CCCCCCEEEEEecCCCCC----CceEEEEEEeeecCccCCCC-CC
Q 013444 204 LNADF-HSDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPHSLQ----NTVTAGIVSCVDRKSSDLGL-GG 272 (443)
Q Consensus 204 v~~d~-~~DlAlLkl~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~~----~~~t~G~Vs~~~~~~~~~~~-~~ 272 (443)
+..|+ .+|||||+++.+. .+.|+.|.... .+..|+.++++||..... ..+....+..+....+...+ ..
T Consensus 77 i~~hp~~~DiALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~ 156 (234)
T 2asu_B 77 MVCGPSGSQLVLLKLERSVTLNQRVALICLPPEWYVVPPGTKCEIAGWGETKGTGNDTVLNVALLNVISNQECNIKHRGR 156 (234)
T ss_dssp EEECSTTCCEEEEEESSCCCCSSSSCCCBCCCTTCCCCTTCEEEEEESSCCTTSSCTTBCEEEEEEEECHHHHHHHTTTC
T ss_pred EecCCCCCCeEEEEeCCcCcCCCcEeccCCCCccccCCCCCEEEEEeCCccCCCCCCccceEEEeeEEcHHHcccccCCc
Confidence 55565 5899999999763 35577775433 356899999999976432 23444444433332221111 11
Q ss_pred ccceEEEEc-----ccCCCCCccceeeecC-C--CEEEEEEEEeecC--CCeEEEEeHHHHHHHHHHHH
Q 013444 273 MRREYLQTD-----CAINAGNSGGPLVNID-G--EIVGINIMKVAAA--DGLSFAVPIDSAAKIIEQFK 331 (443)
Q Consensus 273 ~~~~~i~~d-----~~i~~G~SGGPlvd~~-G--~VVGI~s~~~~~~--~g~~~aIPi~~i~~~l~~l~ 331 (443)
.....+... ...|.|+|||||+-.+ | .++||++++..-. ..-+.+.-+...+++|++..
T Consensus 157 ~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~ 225 (234)
T 2asu_B 157 VRESEMCTEGLLAPVGACEGDYGGPLACFTHNSWVLEGIIIPNRVCARSRWPAVFTRVSVFVDWIHKVM 225 (234)
T ss_dssp CCTTEEEECCCSSCCBCCTTCTTCEEEEEETTEEEEEEEECCCSSSSCTTCCEEEEEGGGSHHHHHHHC
T ss_pred cCcceEeecCCCCCCeeccCCCCCceEEEECCeEEEEEEEEcCCCCCCCCCCeEEEEHHHHHHHHHHHh
Confidence 123345442 3579999999999543 3 7999999875311 22355677777777776654
No 83
>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation, fibrinolysis, plasminogen activation; HET: ABV; 1.45A {Homo sapiens} SCOP: b.47.1.2 PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U* 1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U* 2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U* 1vj9_U* 1sc8_U* ...
Probab=99.42 E-value=1.8e-11 Score=115.53 Aligned_cols=189 Identities=19% Similarity=0.209 Sum_probs=114.8
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEE
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVL 204 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d---------g~~~~a~vv 204 (443)
-.|.+|.|........ ....|+|.+|+++ +|||+|||+.+... ...+.|.+.. ...+..+-+
T Consensus 11 ~~Pw~v~l~~~~~~~~---~~~~CgGtLI~~~-~VLTAAHC~~~~~~-----~~~~~v~~g~~~~~~~~~~~~~~~v~~i 81 (247)
T 3mhw_U 11 NQPWFAAIYRRHRGGS---VTYVCGGSLISPC-WVISATHCFIDYPK-----KEDYIVYLGRSRLNSNTQGEMKFEVENL 81 (247)
T ss_dssp GSTTEEEEEEECTTSC---EEEEEEEEEEETT-EEEECGGGTTTSCC-----GGGEEEEESCCBSSSCCTTCEEEEEEEE
T ss_pred CCCCEEEEEEecCCCc---cceEEEEEEEeCC-EEEEcHHhCcCCCC-----CccEEEEeccccccCCCCCCEEEEEEEE
Confidence 4688899875432211 1256999999988 99999999975321 2345555532 244556555
Q ss_pred eecCC---------CCEEEEEEcCC--------CCCCccccCCC-CCCCCCCEEEEEecCCCC------CCceEEEEEEe
Q 013444 205 NADFH---------SDIAIVKINSK--------TPLPAAKLGTS-SKLCPGDWVVAMGCPHSL------QNTVTAGIVSC 260 (443)
Q Consensus 205 ~~d~~---------~DlAlLkl~~~--------~~~~~~~l~~s-~~~~~G~~V~~iG~p~~~------~~~~t~G~Vs~ 260 (443)
..|+. +|||||+++.+ ..+.++.|... ..+..|+.+++.||.... ...+....+..
T Consensus 82 ~~hp~y~~~~~~~~~DIALl~L~~~~~~~~~~~~~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~ 161 (247)
T 3mhw_U 82 ILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTISLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKL 161 (247)
T ss_dssp EECTTCEEC-CCEESCCEEEEEECTTSCCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSTTCSSCCSBCEEEEEEE
T ss_pred EECCCCCCCcCCCCCcEEEEEeCCccccccccCCcccccccCCCcCCCCCCCEEEEEecCCcCCCCcccchhheeeEEEE
Confidence 55553 59999999864 23456666442 345679999999997642 12334444443
Q ss_pred eecCccCCC--CC-CccceEEEEc-----ccCCCCCccceeeec-CC--CEEEEEEEEeecC--CCeEEEEeHHHHHHHH
Q 013444 261 VDRKSSDLG--LG-GMRREYLQTD-----CAINAGNSGGPLVNI-DG--EIVGINIMKVAAA--DGLSFAVPIDSAAKII 327 (443)
Q Consensus 261 ~~~~~~~~~--~~-~~~~~~i~~d-----~~i~~G~SGGPlvd~-~G--~VVGI~s~~~~~~--~g~~~aIPi~~i~~~l 327 (443)
+....+... .. ......+... ...|.|+|||||+-. +| .++||++++..-. ..-+.+.-+...+++|
T Consensus 162 ~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPl~~~~~~~~~l~Gi~S~g~~c~~~~~p~vyt~V~~~~~WI 241 (247)
T 3mhw_U 162 ISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWI 241 (247)
T ss_dssp ECHHHHTSTTTTGGGCCTTEEEEECTTSCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSBTTBCEEEEEGGGCHHHH
T ss_pred EChHHhcCccccCCcCCCCeEecCCCCCCCccCCCCCCCeEEEEECCCEEEEEEEEECCCCCCCCCCeEEEEHHHHHHHH
Confidence 333332211 11 1122345442 467999999999943 34 4999999875311 2235566777777777
Q ss_pred HHHH
Q 013444 328 EQFK 331 (443)
Q Consensus 328 ~~l~ 331 (443)
++..
T Consensus 242 ~~~~ 245 (247)
T 3mhw_U 242 RSHT 245 (247)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 6543
No 84
>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine proteinases, trypsin-like serine protease, tumor marker, hydrolase; 1.61A {Homo sapiens}
Probab=99.41 E-value=3.1e-11 Score=113.19 Aligned_cols=182 Identities=17% Similarity=0.214 Sum_probs=113.4
Q ss_pred CCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeC-----CCcEEEEEEEeecC-
Q 013444 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQ-----DGRTFEGTVLNADF- 208 (443)
Q Consensus 135 ~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~-----dg~~~~a~vv~~d~- 208 (443)
.|.+|.|.... ...|+|.+|+++ +|||+|||+..... ...+.|.+. ++..+..+-+..|+
T Consensus 12 ~Pw~v~l~~~~--------~~~CgGtLIs~~-~VLTAAhC~~~~~~-----~~~~~v~~G~~~~~~~~~~~v~~i~~hp~ 77 (232)
T 2oq5_A 12 WPWQASLQWDG--------SHRCGATLINAT-WLVSAAHCFTTYKN-----PARWTASFGVTIKPSKMKRGLRRIIVHEK 77 (232)
T ss_dssp STTEEEEEETT--------EEEEEEEEEETT-EEEECGGGGSSCCC-----GGGEEEEESSBSTTCSEEEEEEEEEECTT
T ss_pred CCeeEEEEeCC--------CeeEEEEEEcCC-EEEECHHHcCCCCC-----CceEEEEEeeEECCCceEEeEEEEEeCCC
Confidence 57888886421 256999999988 99999999976321 134556553 23445555555554
Q ss_pred ------CCCEEEEEEcCCC----CCCccccCCCC-CCCCCCEEEEEecCCCC-----CCceEEEEEEeeecCccCC--CC
Q 013444 209 ------HSDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPHSL-----QNTVTAGIVSCVDRKSSDL--GL 270 (443)
Q Consensus 209 ------~~DlAlLkl~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~-----~~~~t~G~Vs~~~~~~~~~--~~ 270 (443)
.+|||||+++.+. .+.++.|.... .+..|+.+++.||.... ...+....+.-+....+.. .+
T Consensus 78 y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~ 157 (232)
T 2oq5_A 78 YKHPSHDYDISLAELSSPVPYTNAVHRVCLPDASYEFQPGDVMFVTGFGALKNDGYSQNHLRQAQVTLIDATTCNEPQAY 157 (232)
T ss_dssp CCTTCCTTCCEEEEESSCCCCCSSSCCCBCCCTTCCCCTTCEEEEEESCCSSTTCCCCSBCEEEEEEEECHHHHTSTTTT
T ss_pred CCCCCCCCCEEEEEecCCCccCCceeEeECCCccccCCCCCEEEEEECCccCCCCCCCceeeEeEEEEeCHHHcCCcccc
Confidence 3699999998763 34567775432 45679999999997532 1234444444443333321 11
Q ss_pred C-CccceEEEEc-----ccCCCCCccceeeecC--C--CEEEEEEEEeecC--CCeEEEEeHHHHHHHHHHH
Q 013444 271 G-GMRREYLQTD-----CAINAGNSGGPLVNID--G--EIVGINIMKVAAA--DGLSFAVPIDSAAKIIEQF 330 (443)
Q Consensus 271 ~-~~~~~~i~~d-----~~i~~G~SGGPlvd~~--G--~VVGI~s~~~~~~--~g~~~aIPi~~i~~~l~~l 330 (443)
. ......+... ...|.|+|||||+..+ | .++||++++..-. ..-+.+.-+...+++|++.
T Consensus 158 ~~~~~~~~~Ca~~~~~~~~~C~GDsGgPL~~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~ 229 (232)
T 2oq5_A 158 NDAITPRMLCAGSLEGKTDACQGDSGGPLVSSDARDIWYLAGIVSWGDECAKPNKPGVYTRVTALRDWITSK 229 (232)
T ss_dssp TTCCCTTEEEEECTTCSSBCCTTCTTCEEEEECTTSCEEEEEEEEECSSSSBTTBCEEEEETGGGHHHHHHH
T ss_pred CCccCCCEEeecCCCCCCccCCCCCCCcEEEECCCCCEEEEEEEEeCCCCCCCCCCeEEEEhHHhHHHHHHH
Confidence 1 1123455542 3679999999999543 3 5999999875311 1234556666677777654
No 85
>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase - serine proteinase (GAM inactive serine proteinase (alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP: b.47.1.2
Probab=99.41 E-value=3.9e-12 Score=120.06 Aligned_cols=179 Identities=17% Similarity=0.161 Sum_probs=104.9
Q ss_pred HhCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeC---------CCcEEEEEE
Q 013444 133 RVCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQ---------DGRTFEGTV 203 (443)
Q Consensus 133 ~~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~---------dg~~~~a~v 203 (443)
.-.|.+|.|. .. +...|+|.+|+++ +|||+|||+.+ .+.|.+. .++.+..+-
T Consensus 13 ~~~Pw~v~l~-~~-------~~~~CgGsLIs~~-~VLTAAHC~~~----------~~~v~~G~~~~~~~~~~~~~~~v~~ 73 (240)
T 1sgf_A 13 NSQPWHVAVY-RF-------NKYQCGGVLLDRN-WVLTAAHCYND----------KYQVWLGKNNFLEDEPSDQHRLVSK 73 (240)
T ss_dssp CCCTTEEEEE-CT-------TSCCEEEEECSSS-EEEECGGGCCS----------CCEEEECC----C-CTTCEEEEEEE
T ss_pred CCcCCEEEEE-eC-------CCeEEEEEEecCC-EEEECHHhCCC----------CceEEeCCcccccCCCCceEEEEEE
Confidence 3468889883 21 1256999999987 99999999964 1223322 133444444
Q ss_pred EeecC------------------CCCEEEEEEcCCC----CCCccccCCCCCCCCCCEEEEEecCCCCC------CceEE
Q 013444 204 LNADF------------------HSDIAIVKINSKT----PLPAAKLGTSSKLCPGDWVVAMGCPHSLQ------NTVTA 255 (443)
Q Consensus 204 v~~d~------------------~~DlAlLkl~~~~----~~~~~~l~~s~~~~~G~~V~~iG~p~~~~------~~~t~ 255 (443)
+..|+ .+|||||+++.+. .+.|+.|.. .....|+.++++||..... ..+..
T Consensus 74 ~~~Hp~y~~~~~~~~~~~~~~~~~~DIALl~L~~~~~~~~~v~picL~~-~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~ 152 (240)
T 1sgf_A 74 AIPHPDFNMSLLNEHTPQPEDDYSNDLMLLRLSKPADITDVVKPITLPT-EEPKLGSTCLASGWGSTTPIKFKYPDDLQC 152 (240)
T ss_dssp EEECTTSCGGGC----CCTTCBCTTCCEEEEESSCCCCCSSCCCCCCCC-SCCCTTCEEEEC-------C---------C
T ss_pred EEcCCCCcccccccccccccCCCCCceEEEEeCCcCcCCCcccccCCCC-CCCCCCCEEEEEecCCCCCCCCCCCccccE
Confidence 44433 3699999998763 356777765 3457899999999975421 11222
Q ss_pred EEEEeeecCccCCCCC-CccceEEEEc-----ccCCCCCccceeeecCCCEEEEEEEEeecC---CCeEEEEeHHHHHHH
Q 013444 256 GIVSCVDRKSSDLGLG-GMRREYLQTD-----CAINAGNSGGPLVNIDGEIVGINIMKVAAA---DGLSFAVPIDSAAKI 326 (443)
Q Consensus 256 G~Vs~~~~~~~~~~~~-~~~~~~i~~d-----~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~---~g~~~aIPi~~i~~~ 326 (443)
..+..+....+...+. ......+... ...|.|+|||||+. +|.++||++++.... ..-+.+.-+...+++
T Consensus 153 ~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~GI~S~g~~~C~~~~~p~vyt~V~~~~~W 231 (240)
T 1sgf_A 153 VNLKLLPNEDCDKAHEMKVTDAMLCAGEMDGGSYTCEHDSGGPLIC-DGILQGITSWGPEPCGEPTEPSVYTKLIKFSSW 231 (240)
T ss_dssp EEEEEECTHHHHTTCSSBCCTTEEEEEECSSSEEECCCCTTCEEEE-TTEEEEEECCCCSSCCCSSCCEEEEESGGGHHH
T ss_pred EeeeEeCHHHhhhhhCCCcCCCeEeEccCCCCCCCCCCCCcCcEEE-ccEEEEEEEECCCCCCCCCCCeEEEeHHHHHHH
Confidence 2222222222211111 1122344432 34799999999996 789999999873321 223556777778888
Q ss_pred HHHHHH
Q 013444 327 IEQFKK 332 (443)
Q Consensus 327 l~~l~~ 332 (443)
|++..+
T Consensus 232 I~~~~~ 237 (240)
T 1sgf_A 232 IRETMA 237 (240)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 877654
No 86
>1aut_C Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 3f6u_H*
Probab=99.41 E-value=6.8e-12 Score=119.15 Aligned_cols=183 Identities=16% Similarity=0.176 Sum_probs=112.1
Q ss_pred CCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEEe
Q 013444 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVLN 205 (443)
Q Consensus 135 ~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d---------g~~~~a~vv~ 205 (443)
.|-+|.|.... ....|+|.+|+++ +|||+|||+.+. ..+.|++.. +..+..+-+.
T Consensus 12 ~Pw~v~l~~~~-------~~~~CgGsLI~~~-~VLTAAHC~~~~--------~~~~v~~G~~~~~~~~~~~~~~~v~~i~ 75 (250)
T 1aut_C 12 SPWQVVLLDSK-------KKLACGAVLIHPS-WVLTAAHCMDES--------KKLLVRLGEYDLRRWEKWELDLDIKEVF 75 (250)
T ss_dssp CTTEEEEECTT-------SCEEEEEEEEETT-EEEECGGGSSSC--------SCCEEEESCCBTTCCCTTCEEEEEEEEE
T ss_pred CCCEEEEecCC-------CceEEEEEEeeCC-EEEEChHHcCCC--------CceEEEEcccccCCCCCccEEEEEEEEE
Confidence 57788886421 2357999999988 999999999753 234455432 2345555555
Q ss_pred ecCC-------CCEEEEEEcCCC----CCCccccCCCC-----CCCCCCEEEEEecCCCCCC----------ceEEEEEE
Q 013444 206 ADFH-------SDIAIVKINSKT----PLPAAKLGTSS-----KLCPGDWVVAMGCPHSLQN----------TVTAGIVS 259 (443)
Q Consensus 206 ~d~~-------~DlAlLkl~~~~----~~~~~~l~~s~-----~~~~G~~V~~iG~p~~~~~----------~~t~G~Vs 259 (443)
.|+. +|||||+|+.+. .+.|+.|.... ....|+.++++||+..... .+....+.
T Consensus 76 ~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~~~~~L~~~~~~ 155 (250)
T 1aut_C 76 VHPNYSKSTTDNDIALLHLAQPATLSQTIVPICLPDSGLAERELNQAGQETLVTGWGYHSSREKEAKRNRTFVLNFIKIP 155 (250)
T ss_dssp ECTTCBTTTTBTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHTTTSTTCEEEEEECCCCCSCCSCCCSSCSSBCEEEEEE
T ss_pred ECCCCCCCCCCCcEEEEEECCcccCCCceeeeEcCCCccccccccCCCCEEEEEEeCCCCCCCccccccccceeeEEEEE
Confidence 6653 699999999763 24566664321 2357999999999753211 23333333
Q ss_pred eeecCccCCCCC-CccceEEEEc-----ccCCCCCccceeeec-CCC--EEEEEEEEeecC--CCeEEEEeHHHHHHHHH
Q 013444 260 CVDRKSSDLGLG-GMRREYLQTD-----CAINAGNSGGPLVNI-DGE--IVGINIMKVAAA--DGLSFAVPIDSAAKIIE 328 (443)
Q Consensus 260 ~~~~~~~~~~~~-~~~~~~i~~d-----~~i~~G~SGGPlvd~-~G~--VVGI~s~~~~~~--~g~~~aIPi~~i~~~l~ 328 (443)
-+....+...+. ......++.. ...|.|+|||||+-. +|+ ++||++++..-. ..-+.+.-+...+++|+
T Consensus 156 i~~~~~C~~~~~~~~~~~~~Cag~~~~~~~~C~GDSGGPL~~~~~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI~ 235 (250)
T 1aut_C 156 VVPHNECSEVMSNMVSENMLCAGILGDRQDACEGDSGGPMVASFHGTWFLVGLVSWGEGCGLLHNYGVYTKVSRYLDWIH 235 (250)
T ss_dssp EECHHHHHHHCSSCCCTTEEEECCTTCCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEECGGGTHHHHH
T ss_pred EecHHHhhHHhccCCCCCEEEeCCCCCCCCCCCCCCchheEEEECCeEEEEEEEEECCCCCCCCCCEEEEEHHHHHHHHH
Confidence 332222211010 1123345542 457999999999953 564 999999875311 22455677777788887
Q ss_pred HHHHc
Q 013444 329 QFKKN 333 (443)
Q Consensus 329 ~l~~~ 333 (443)
+..+.
T Consensus 236 ~~~~~ 240 (250)
T 1aut_C 236 GHIRD 240 (250)
T ss_dssp HHHC-
T ss_pred HHhhc
Confidence 76543
No 87
>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation; 1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A
Probab=99.41 E-value=8.9e-12 Score=116.71 Aligned_cols=184 Identities=19% Similarity=0.188 Sum_probs=113.8
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCCC------cEEEEEEEeec
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDG------RTFEGTVLNAD 207 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~dg------~~~~a~vv~~d 207 (443)
-.|.+|.|...... .....|+|.+|+++ +|||+|||+.+. ..+.|.+... ..+..+-+..|
T Consensus 11 ~~Pw~v~l~~~~~~----~~~~~CgGtLIs~~-~VLTAAHC~~~~--------~~~~v~~G~~~~~~~~~~~~v~~i~~h 77 (230)
T 2hlc_A 11 LFPYQAGLDITLQD----QRRVWCGGSLIDNK-WILTAAHCVHDA--------VSVVVYLGSAVQYEGEAVVNSERIISH 77 (230)
T ss_dssp TSTTEEEEEEEETT----SCEEEEEEEEEETT-EEEECHHHHTTE--------EEEEEEESCSBTTCCSEEEECSEEEEC
T ss_pred CCCcEEEEEEEecC----CCCEEEEEEEeeCC-EEEECHHHCCCC--------cceEEEEeeeecCCCCeEEEEEEEEEC
Confidence 35788888754321 12367999999988 999999999752 3566666432 33444444455
Q ss_pred C-------CCCEEEEEEcCC----CCCCccccCCCC---CCCCCCEEEEEecCCCCC--CceEEEEEEeeecCccCCCCC
Q 013444 208 F-------HSDIAIVKINSK----TPLPAAKLGTSS---KLCPGDWVVAMGCPHSLQ--NTVTAGIVSCVDRKSSDLGLG 271 (443)
Q Consensus 208 ~-------~~DlAlLkl~~~----~~~~~~~l~~s~---~~~~G~~V~~iG~p~~~~--~~~t~G~Vs~~~~~~~~~~~~ 271 (443)
+ .+|||||+++ + ..+.|+.|.... ....|+.++++||..... ..+....+..+....+...+.
T Consensus 78 p~y~~~~~~~DiALl~L~-~~~~~~~v~picLp~~~~~~~~~~~~~~~v~GwG~~~~~~~~l~~~~~~~~~~~~C~~~~~ 156 (230)
T 2hlc_A 78 SMFNPDTYLNDVALIKIP-HVEYTDNIQPIRLPSGEELNNKFENIWATVSGWGQSNTDTVILQYTYNLVIDNDRCAQEYP 156 (230)
T ss_dssp TTCBTTTTBTCCEEEECS-CCCCCSSCCCCBCCCGGGGGCCCTTCEEEEEESSCCSSCCCBCEEEEEEEECHHHHHTTSC
T ss_pred CCCCCCCccccEEEEEec-CCCcCCcEeeeEcCCccccccccCCcEEEEEeeeecCCCCceeEEEEEEEeCHHHhhhhhC
Confidence 4 3699999998 5 235677775533 245789999999986432 233333333333222211111
Q ss_pred --CccceEEEEc----ccCCCCCccceeeec-CCCEEEEEEEEee-c--CCCeEEEEeHHHHHHHHHHHH
Q 013444 272 --GMRREYLQTD----CAINAGNSGGPLVNI-DGEIVGINIMKVA-A--ADGLSFAVPIDSAAKIIEQFK 331 (443)
Q Consensus 272 --~~~~~~i~~d----~~i~~G~SGGPlvd~-~G~VVGI~s~~~~-~--~~g~~~aIPi~~i~~~l~~l~ 331 (443)
......+... ...|.|+|||||+-. ++.++||++++.. . ......+.-+....+++++..
T Consensus 157 ~~~~~~~~~Ca~~~~~~~~C~GDSGgPl~~~~~~~l~Gi~S~g~~~~C~~~~p~vyt~V~~~~~WI~~~~ 226 (230)
T 2hlc_A 157 PGIIVESTICGDTSDGKSPCFGDSGGPFVLSDKNLLIGVVSFVSGAGCESGKPVGFSRVTSYMDWIQQNT 226 (230)
T ss_dssp TTSSCTTEEEECCTTSCBCCTTCTTCEEEEGGGTEEEEEEEECCTTCTTSCCCEEEEEGGGGHHHHHHHH
T ss_pred CCcccCCeEEecCCCCCCcCCCCCCCeeEECcCCEEEEEEEEeCCCCCCCCCCCEEEEhHHhHHHHHHhh
Confidence 1223345443 357999999999943 3589999998752 1 112344566777777777654
No 88
>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes scabiei type hominis} SCOP: b.47.1.0
Probab=99.41 E-value=3e-12 Score=119.50 Aligned_cols=187 Identities=18% Similarity=0.206 Sum_probs=114.4
Q ss_pred HhCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC--------CcEEEEEEE
Q 013444 133 RVCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD--------GRTFEGTVL 204 (443)
Q Consensus 133 ~~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d--------g~~~~a~vv 204 (443)
.-.|.+|.|...... ....|+|++|+++ +|||+|||+.+.. ...+.|.+.. +..+..+.+
T Consensus 9 ~~~Pw~v~l~~~~~~-----~~~~CgGtLI~~~-~VLTAAHC~~~~~------~~~~~v~~g~~~~~~~~~~~~~~v~~i 76 (228)
T 3h7o_A 9 KQVPWTVAVRTYPGE-----ESLTCGGAILSQW-FVLTAAHCVFDQK------PETIVIQYESTNLWEDPGKSDPYVSHV 76 (228)
T ss_dssp GGSTTEEEEEECGGG-----CCEEEEEEESSSS-EEEECHHHHTTSC------GGGCEEEESCSBTTTBCCEEECCEEEE
T ss_pred CCCCeEEEEeecCCC-----CceEeeeEEeeCC-EEEEcHHhcccCC------CCcEEEEecccccccCCCceeeeEEEE
Confidence 346888999764321 1236999999987 9999999996432 2344455432 122223333
Q ss_pred eec------CCCCEEEEEEcCCC-----CCCccccCCCC-CCCCCCEEEEEecCCCCC-----CceEEEEEEeeecCccC
Q 013444 205 NAD------FHSDIAIVKINSKT-----PLPAAKLGTSS-KLCPGDWVVAMGCPHSLQ-----NTVTAGIVSCVDRKSSD 267 (443)
Q Consensus 205 ~~d------~~~DlAlLkl~~~~-----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~~-----~~~t~G~Vs~~~~~~~~ 267 (443)
..+ ..+|||||+++.+. .+.++.|.... .+..|+.+++.||..... ..+....+..+....+.
T Consensus 77 ~~h~y~~~~~~~DIALl~L~~~v~~~~~~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~ 156 (228)
T 3h7o_A 77 YLSFYRQETMENDIAILELSRPLKLDGLKSKPAKLPDIEFRPKTGSDVLVSGYGDGQTMDPKDHDLKSAQLTVVDLDECR 156 (228)
T ss_dssp EESSCBTTTTBTCCEEEEESSCCCCCSSSSCCCBCCCTTCCCCTTCEEEEEECCCSSCSCGGGGBCEEEEEEEECHHHHH
T ss_pred EccccCCCCccCCEEEEEECCcccccccccccccCCccccCCCCCCeeEEEEEecCCCCCCcccccccceeEEEcHHHHH
Confidence 332 24699999998763 45667775533 267899999999976432 12344444433332221
Q ss_pred CCCC--CccceEEEEc---ccCCCCCccceeeecCCCEEEEEEEEeecC-CCeEEEEeHHHHHHHHHHHHH
Q 013444 268 LGLG--GMRREYLQTD---CAINAGNSGGPLVNIDGEIVGINIMKVAAA-DGLSFAVPIDSAAKIIEQFKK 332 (443)
Q Consensus 268 ~~~~--~~~~~~i~~d---~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~-~g~~~aIPi~~i~~~l~~l~~ 332 (443)
..+. ......+... ...|.|+|||||+. +++++||++++..-. ..-+.+.-+...+++|++..+
T Consensus 157 ~~~~~~~~~~~~~Ca~~~~~~~C~GDsGgPl~~-~~~l~Gi~S~g~~c~~~~p~vyt~v~~~~~WI~~~i~ 226 (228)
T 3h7o_A 157 TKYGPIFLSLQVFCAQKVGVSLESGDAGDPTVQ-QDTLVGVAAYFPKRPEGAPEVFTKVGSYVSWIQDIIK 226 (228)
T ss_dssp HHHTTSCCCSSEEEEECTTCCCCGGGTTCEEEE-TTEEEEEECCCTTCCTTCCEEEEEGGGTHHHHHHHHT
T ss_pred HHhcCccCCceEEecCCCCCcCCCCCCCCccee-cCeEEEEEeecCcCCCCCCcEEEEHHHHHHHHHHHhh
Confidence 1110 1122344432 46789999999995 788999999864321 224556777778888877654
No 89
>2r0l_A Hepatocyte growth factor activator; serine protease, antibody, allosteric inhibitor, EGF-like DO glycoprotein, hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A*
Probab=99.40 E-value=2.2e-11 Score=115.28 Aligned_cols=184 Identities=17% Similarity=0.207 Sum_probs=115.4
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEE
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVL 204 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d---------g~~~~a~vv 204 (443)
-.|.+|.|... ...|+|.+|+++ ||||+|||+.+... ...+.|.+.. .+.+..+-+
T Consensus 11 ~~Pw~v~l~~~---------~~~CgGsLIs~~-~VLTAAHC~~~~~~-----~~~~~V~~G~~~~~~~~~~~~~~~v~~i 75 (248)
T 2r0l_A 11 SHPWLAAIYIG---------DSFCAGSLVHTC-WVVSAAHCFSHSPP-----RDSVSVVLGQHFFNRTTDVTQTFGIEKY 75 (248)
T ss_dssp SSTTEEEEEET---------TEEEEEEEEETT-EEEECGGGGTTCCC-----GGGEEEEESCCBTTCCCSSCEEECEEEE
T ss_pred CCCeEEEEEcC---------CceEEEEEEcCC-EEEECHHHcCCCCC-----cCcEEEEEEeEEcCCCCCccEEEeeeEE
Confidence 35778888642 256999999988 99999999975321 1356666542 234444444
Q ss_pred eecC--------CCCEEEEEEcCC--------CCCCccccCCC-CCCCCCCEEEEEecCCCC------CCceEEEEEEee
Q 013444 205 NADF--------HSDIAIVKINSK--------TPLPAAKLGTS-SKLCPGDWVVAMGCPHSL------QNTVTAGIVSCV 261 (443)
Q Consensus 205 ~~d~--------~~DlAlLkl~~~--------~~~~~~~l~~s-~~~~~G~~V~~iG~p~~~------~~~~t~G~Vs~~ 261 (443)
..|+ .+|||||+++.+ ..+.++.|... ..+..|+.++++||.... ...+....+.-+
T Consensus 76 ~~hp~y~~~~~~~~DiALl~L~~~~~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~ 155 (248)
T 2r0l_A 76 IPYTLYSVFNPSDHDLVLIRLKKKGDRCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENVSGYSSSLREALVPLV 155 (248)
T ss_dssp EECTTCCTTSTTTTCCEEEEECCSSSCSSCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSSSCCSCCSBCEEEEEEBC
T ss_pred EeCCccCcCCCCCCCEEEEEeCCcccccccCCCcEEEEECCCCCCCCCCCCEEEEEEccccCCCCCCCCchheEEEEeee
Confidence 4433 469999999865 23456667543 345689999999997532 223444444433
Q ss_pred ecCccCCC--CC-CccceEEEEc-----ccCCCCCccceeeec-CC--CEEEEEEEEeecC--CCeEEEEeHHHHHHHHH
Q 013444 262 DRKSSDLG--LG-GMRREYLQTD-----CAINAGNSGGPLVNI-DG--EIVGINIMKVAAA--DGLSFAVPIDSAAKIIE 328 (443)
Q Consensus 262 ~~~~~~~~--~~-~~~~~~i~~d-----~~i~~G~SGGPlvd~-~G--~VVGI~s~~~~~~--~g~~~aIPi~~i~~~l~ 328 (443)
....+... +. ......+... ...|.|+|||||+-. +| .++||++++..-. ..-+.+.-+....++|+
T Consensus 156 ~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~ 235 (248)
T 2r0l_A 156 ADHKCSSPEVYGADISPNMLCAGYFDCKSDACQGDSGGPLACEKNGVAYLYGIISWGDGCGRLHKPGVYTRVANYVDWIN 235 (248)
T ss_dssp CHHHHTSTTTTGGGCCTTEEEESCSSSCCBCCTTCTTCEEEEEETTEEEEEEEEEECSTTTCTTCCEEEEEGGGGHHHHH
T ss_pred CHHHhCCccccCCcCCCCEEeECCCCCCCcCCCCccCCeEEEEECCcEEEEEEEEeCCCCCCCCCCcEEEEHHHHHHHHH
Confidence 33333211 11 1123455542 457999999999954 45 5999999875311 22455677777888887
Q ss_pred HHHH
Q 013444 329 QFKK 332 (443)
Q Consensus 329 ~l~~ 332 (443)
+..+
T Consensus 236 ~~~~ 239 (248)
T 2r0l_A 236 DRIR 239 (248)
T ss_dssp HHHC
T ss_pred HHhc
Confidence 7654
No 90
>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA inhibitor complex, covalent inhibitor, alternative splicing, blood coagulation; HET: INH; 1.60A {Homo sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A* 1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A* 1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A* 2fda_A* ...
Probab=99.40 E-value=1e-11 Score=116.93 Aligned_cols=187 Identities=18% Similarity=0.165 Sum_probs=113.6
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeC---------CCcEEEEEEE
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQ---------DGRTFEGTVL 204 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~---------dg~~~~a~vv 204 (443)
-.|.+|.|..... .....|+|.+|+++ +|||+|||+.+... ...+.|.+. +.+.+..+-+
T Consensus 11 ~~Pw~v~l~~~~~-----~~~~~CgGtLI~~~-~VLTAAHC~~~~~~-----~~~~~v~~G~~~~~~~~~~~~~~~v~~i 79 (238)
T 3bg8_A 11 EWPWQVTLHTTSP-----TQRHLCGGSIIGNQ-WILTAAHCFYGVES-----PKILRVYSGILNQSEIKEDTSFFGVQEI 79 (238)
T ss_dssp SSTTEEEEEECSS-----SCEEEEEEEEEETT-EEEECGGGGTTCCC-----GGGEEEECSCSBGGGCCTTSCCEEEEEE
T ss_pred CcCcEEEEEeecC-----CCcEEEEEEEeeCC-EEEECHHHCCCCCC-----CceEEEEEeeccCCcCCCCceEEeeEEE
Confidence 3578888875431 12367999999988 99999999975321 134556543 2345566656
Q ss_pred eecCC-------CCEEEEEEcCCC----CCCccccCCCC-CCCCCCEEEEEecCCCCC-----CceEEEEEEeeecCccC
Q 013444 205 NADFH-------SDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPHSLQ-----NTVTAGIVSCVDRKSSD 267 (443)
Q Consensus 205 ~~d~~-------~DlAlLkl~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~~-----~~~t~G~Vs~~~~~~~~ 267 (443)
..|+. +|||||+|+.+. .+.|+.|.... ....++.+++.||..... ..+....+.-+....+.
T Consensus 80 ~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~ 159 (238)
T 3bg8_A 80 IIHDQYKMAESGYDIALLKLETTVNYTDSQRPISLPSKGERNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEECQ 159 (238)
T ss_dssp EECTTCCCGGGSCCCEEEEESSCCCCBTTBCCCBCCCGGGGSSCCCCEEEEESCCSSSSCCCCSBCEEEECCEECHHHHH
T ss_pred EECCCCCCCCCCCcEEEEEECCccccCCCcccCCCCCCccCcCCCCeEEEEecCCCCCCCChhhhhcEeeEEEECHHHhh
Confidence 66653 699999998763 34566675432 356788999999975321 22333333222222211
Q ss_pred --CCCCCccceEEEEc-----ccCCCCCccceeeec-CC--CEEEEEEEEeecC--CCeEEEEeHHHHHHHHHHHH
Q 013444 268 --LGLGGMRREYLQTD-----CAINAGNSGGPLVNI-DG--EIVGINIMKVAAA--DGLSFAVPIDSAAKIIEQFK 331 (443)
Q Consensus 268 --~~~~~~~~~~i~~d-----~~i~~G~SGGPlvd~-~G--~VVGI~s~~~~~~--~g~~~aIPi~~i~~~l~~l~ 331 (443)
+.........+... ...|.|+|||||+-. +| .++||++++..-. ..-+.+.-+....++|++..
T Consensus 160 ~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI~~~~ 235 (238)
T 3bg8_A 160 KRYRGHKITHKMICAGYREGGKDACKGDSGGPLSCKHNEVWHLVGITSWGEGCAQRERPGVYTNVVEYVDWILEKT 235 (238)
T ss_dssp HHCTTSCCCTTEEEECCTTCCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHH
T ss_pred hhhcCCCCCCCeEeecCCCCCCCcCCCCCCcceEEEECCeEEEEEEEEECCCCCCCCCCcEEEeHHHHHHHHHHHH
Confidence 11101223345542 357999999999954 34 4999999875311 22345566777777776654
No 91
>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens} PDB: 4fxg_H*
Probab=99.40 E-value=9.2e-12 Score=117.02 Aligned_cols=182 Identities=19% Similarity=0.190 Sum_probs=111.0
Q ss_pred CCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC-------CcEEEEEEEeec
Q 013444 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD-------GRTFEGTVLNAD 207 (443)
Q Consensus 135 ~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d-------g~~~~a~vv~~d 207 (443)
.|.+|.|. +...|+|.+|+++ +|||+|||+.+... ....+.|.+.. ...+..+.+..|
T Consensus 12 ~Pw~v~l~----------~~~~CgGtLI~~~-~VLTAAhC~~~~~~----~~~~~~v~~g~~~~~~~~~~~~~v~~i~~h 76 (242)
T 3tvj_B 12 FPWQVLIL----------GGTTAAGALLYDN-WVLTAAHAVYEQKH----DASALDIRMGTLKRLSPHYTQAWSEAVFIH 76 (242)
T ss_dssp STTEEEEE----------SSEEEEEEEETTT-EEEECHHHHSTTTT----CSSCCEEEESCSBTTCSCCEEEEEEEEEEC
T ss_pred CCCEEEEe----------cCCcEEEEEecCC-EEEECHHHCCCCCC----CcceEEEEeccccccCcccceeeEEEEEeC
Confidence 57788886 1256999999987 99999999965211 12344555432 134444445544
Q ss_pred C--------CCCEEEEEEcCC----CCCCccccCCCC---CCCCCCEEEEEecCCCCC----CceEEEEEEeeecCccCC
Q 013444 208 F--------HSDIAIVKINSK----TPLPAAKLGTSS---KLCPGDWVVAMGCPHSLQ----NTVTAGIVSCVDRKSSDL 268 (443)
Q Consensus 208 ~--------~~DlAlLkl~~~----~~~~~~~l~~s~---~~~~G~~V~~iG~p~~~~----~~~t~G~Vs~~~~~~~~~ 268 (443)
+ .+|||||+++.+ ..+.|+.|.... .+..|+.+++.||..... ..+....+.-+....+..
T Consensus 77 p~y~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~l~~~~~~i~~~~~C~~ 156 (242)
T 3tvj_B 77 EGYTHDAGFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQRGFLARNLMYVDIPIVDHQKCTA 156 (242)
T ss_dssp TTCCTTSCSTTCCEEEEESSCCCCBTTBCCCBCCCTTGGGGSCTTCEEEEEESCCCTTSSCCSBCEEEEEEBCCHHHHHH
T ss_pred CCCCCCCCCcCcEEEEEECCccccCCCEecCCcCCCcccccccCCCEEEEEEeCCCCCCCcCccceEEeeeEEcHHHHHH
Confidence 3 369999999875 345677775543 367899999999976432 223333333332222110
Q ss_pred C-------CCCccceEEEEc-----ccCCCCCccceeeec---CC--CEEEEEEEEeecC---CCeEEEEeHHHHHHHHH
Q 013444 269 G-------LGGMRREYLQTD-----CAINAGNSGGPLVNI---DG--EIVGINIMKVAAA---DGLSFAVPIDSAAKIIE 328 (443)
Q Consensus 269 ~-------~~~~~~~~i~~d-----~~i~~G~SGGPlvd~---~G--~VVGI~s~~~~~~---~g~~~aIPi~~i~~~l~ 328 (443)
. ........+... ...|.|+|||||+-. +| .++||++++.... ..-+.+.-+...+++|+
T Consensus 157 ~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPL~~~~~~~~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~ 236 (242)
T 3tvj_B 157 AYEKPPYPRGSVTANMLCAGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWIE 236 (242)
T ss_dssp HHHSTTSCTTCCCTTEEEESCTTCCSBCCTTCTTCEEEEEETTTTEEEEEEEEEEEESSTTCTTCCEEEEEGGGGHHHHH
T ss_pred hhccCCcccccccCCeEEECCCCCCCccccCCCCCeEEEEeCCCCcEEEEEEEEeCCCCCCCCCCCeEEEEHHHHHHHHH
Confidence 0 001223355542 467999999999853 23 3999999984322 12355677777777777
Q ss_pred HHH
Q 013444 329 QFK 331 (443)
Q Consensus 329 ~l~ 331 (443)
+..
T Consensus 237 ~~i 239 (242)
T 3tvj_B 237 NII 239 (242)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 92
>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI, protein-protein interaction, non-cognate binding, S1 pocket, primary specificity; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E 1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A 1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ...
Probab=99.39 E-value=1.2e-11 Score=117.22 Aligned_cols=182 Identities=18% Similarity=0.249 Sum_probs=111.4
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeC---------CCcEEEEEEE
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQ---------DGRTFEGTVL 204 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~---------dg~~~~a~vv 204 (443)
-.|.+|.|.... +...|+|.+|+++ +|||+|||+.+. ...|.+. ..+.+..+-+
T Consensus 26 ~~Pw~v~l~~~~-------~~~~CgGtLI~~~-~VLTAAHC~~~~---------~~~v~~G~~~~~~~~~~~~~~~v~~i 88 (245)
T 1t8o_A 26 SWPWQVSLQDKT-------GFHFCGGSLINEN-WVVTAAHCGVTT---------SDVVVAGEFDQGSSSEKIQKLKIAKV 88 (245)
T ss_dssp SSTTEEEEECTT-------CCEEEEEEEEETT-EEEECGGGCCCT---------TSEEEESCSBTTCSSSCCEEEEEEEE
T ss_pred CCCceEEEEcCC-------CCeEEEEEEeeCC-EEEEcHHhCcCC---------CcEEEEeeeecCCCCCCcEEEEEEEE
Confidence 357888887532 1256999999988 999999998652 1223332 1244555555
Q ss_pred eecC-------CCCEEEEEEcCCC----CCCccccCCCC-CCCCCCEEEEEecCCCC------CCceEEEEEEeeecCcc
Q 013444 205 NADF-------HSDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPHSL------QNTVTAGIVSCVDRKSS 266 (443)
Q Consensus 205 ~~d~-------~~DlAlLkl~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~------~~~~t~G~Vs~~~~~~~ 266 (443)
..|+ .+|||||+++.+. .+.|+.|.... .+..|+.++++||.... ...+....+..+....+
T Consensus 89 ~~hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C 168 (245)
T 1t8o_A 89 FKNSKYNSLTINNDITLLKLSTAASFSQTVSAVCLPSASDDFAAGTTCVTTGWGLTRYTNANTPDRLQQASLPLLSNTNC 168 (245)
T ss_dssp EECTTCCTTTCCSCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSCC--CCCCSBCEEEEEEEECHHHH
T ss_pred EeCCCCCCCCCCCCEEEEEECCCCcCCCceeeeECCCCccCCCCCCEEEEEEeCCCCCCCCCCcchheEEEEeeEcchhh
Confidence 5554 3699999998763 34567775432 45689999999997532 12333333333322221
Q ss_pred CCCCC-CccceEEEE---cccCCCCCccceeeec-CC--CEEEEEEEEeecC--CCeEEEEeHHHHHHHHHHHHH
Q 013444 267 DLGLG-GMRREYLQT---DCAINAGNSGGPLVNI-DG--EIVGINIMKVAAA--DGLSFAVPIDSAAKIIEQFKK 332 (443)
Q Consensus 267 ~~~~~-~~~~~~i~~---d~~i~~G~SGGPlvd~-~G--~VVGI~s~~~~~~--~g~~~aIPi~~i~~~l~~l~~ 332 (443)
...+. .....++.. ....|.|+|||||+-. +| .++||++++..-. ..-+.+.-+...+++|++..+
T Consensus 169 ~~~~~~~~~~~~~Ca~~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~~c~~~~~p~vyt~V~~~~~WI~~~~~ 243 (245)
T 1t8o_A 169 KKYWGTKIKDAMICAGASGVSSCMGDSGGPLVCKKNGAWTLVGIVSWGSSTCSTSTPGVYARVTALVNWVQQTLA 243 (245)
T ss_dssp HHHHGGGCCTTEEEEECSSCBCCTTCTTCEEEEEETTEEEEEEEEEECCTTCCTTSEEEEEEGGGTHHHHHHHHH
T ss_pred hHhhcCcCCCceEEccCCCCccCcccCcCCEEEEECCEEEEEEEEEeCCCCCCCCCCEEEEEHHHHHHHHHHHHc
Confidence 10000 011233443 2457999999999954 34 7999999875321 224556777777888876553
No 93
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=99.39 E-value=6.5e-13 Score=109.54 Aligned_cols=101 Identities=13% Similarity=0.144 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHHcCceeeeecCceeecccHHHHHHhhcCCCCCCCCCCceEEeEECCCCccccCCCCCCCEEEEECCEe
Q 013444 320 IDSAAKIIEQFKKNGRVVRPWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKP 399 (443)
Q Consensus 320 i~~i~~~l~~l~~~g~v~rp~lGi~~~~~~~~~~~~l~~~~~~~~~~~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~ 399 (443)
.+.++++.+++.+++...++|+|+.....+ ....|+.|..+.|+|||+++||++||+|++|||++
T Consensus 4 ~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~---------------~~~~G~~V~~~~pas~A~~aGl~~GDvI~~ing~~ 68 (105)
T 2i4s_A 4 EDKVDAIREAIARNPQEIFQYVRLSQVKRD---------------DKVLGYRVSPGKDPVLFESIGLQDGDMAVALNGLD 68 (105)
T ss_dssp HHHHHHHHHHHHHSGGGHHHHEEEEEEEET---------------TEEEEEEEEECSCTHHHHHHTCCTTCEEEEETTEE
T ss_pred hHHHHHHHHHHHHCHHHHHhhceeEEEecC---------------CcEEEEEEecCCCCCHHHHcCCCCCCEEEEECCEE
Confidence 456888999999999999999999764211 11247778888888888999999999999999999
Q ss_pred eCCHHHHHHHHhc-CCCCeEEEEEEECCCeEEEEEEEe
Q 013444 400 VQSITEIIEIMGD-RVGEPLKVVVQRANDQLVTLTVIP 436 (443)
Q Consensus 400 V~s~~dl~~~l~~-~~g~~v~l~v~R~~g~~~~l~v~~ 436 (443)
|.+|.++..++.. ..|+++.|+|.| +|+.+++.+++
T Consensus 69 v~~~~d~~~~~~~~~~g~~v~l~v~R-~g~~~~~~v~l 105 (105)
T 2i4s_A 69 LTDPNVMNTLFQSMNEMTEMSLTVER-DGQQHDVYIQF 105 (105)
T ss_dssp TTSTTHHHHHHHHHTTCSEEEEEEEE-TTEEEEEEEEC
T ss_pred CCCHHHHHHHHHhcCCCCeEEEEEEE-CCEEEEEEEeC
Confidence 9999999988876 678899999999 88887777653
No 94
>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease, fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens} SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A*
Probab=99.38 E-value=5.2e-11 Score=112.86 Aligned_cols=189 Identities=19% Similarity=0.177 Sum_probs=115.2
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEE
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVL 204 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d---------g~~~~a~vv 204 (443)
-.|-+|.|....... ......|+|.+|+++ +|||+|||+.+... ...+.|.+.. .+.+..+-+
T Consensus 11 ~~Pw~v~l~~~~~~~--~~~~~~CgGtLI~~~-~VLTAAHC~~~~~~-----~~~~~V~~G~~~~~~~~~~~~~~~v~~i 82 (252)
T 1rtf_B 11 SHPWQAAIFAKHRRS--PGERFLCGGILISSC-WILSAAHCFQERFP-----PHHLTVILGRTYRVVPGEEEQKFEVEKY 82 (252)
T ss_dssp GSTTEEEEEEEC------CEEEEEEEEECSSS-EEEECGGGGTTCCC-----GGGEEEEESCSBSSSCCTTCEEEEEEEE
T ss_pred CcCCEEEEEEecCCC--CCCCEEEEEEEEeCC-EEEECHHHCCCCCC-----cccEEEEeCcccccCCCCcceEEEEEEE
Confidence 458888887543211 012357999999988 99999999975311 2355666532 245555555
Q ss_pred eecC-------CCCEEEEEEcCC--------CCCCccccCCCC-CCCCCCEEEEEecCCCCC------CceEEEEEEeee
Q 013444 205 NADF-------HSDIAIVKINSK--------TPLPAAKLGTSS-KLCPGDWVVAMGCPHSLQ------NTVTAGIVSCVD 262 (443)
Q Consensus 205 ~~d~-------~~DlAlLkl~~~--------~~~~~~~l~~s~-~~~~G~~V~~iG~p~~~~------~~~t~G~Vs~~~ 262 (443)
..|+ .+|||||+|+.+ ..+.++.|.... .+..++.+++.||..... ..+....+.-+.
T Consensus 83 ~~Hp~y~~~~~~~DIALl~L~~~~~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~ 162 (252)
T 1rtf_B 83 IVHKEFDDDTYDNDIALLQLKSDSSRCAQESSVVRTVCLPPADLQLPDWTECELSGYGKHEALSPFYSERLKEAHVRLYP 162 (252)
T ss_dssp EECTTCCTTTCTTCCEEEEECCSSSCCSCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSTTCSSCCSBCEEEEEEECC
T ss_pred EeCCCCCcCCCCCCEEEEEECCccccccccCCceeceeCCCccccCCCCCEEEEEEcCCCCCCCccccchheEeeeEEec
Confidence 5554 369999999865 234566665432 356789999999975421 234444444444
Q ss_pred cCccCCCC--C-CccceEEEEc-----------ccCCCCCccceeeec-CC--CEEEEEEEEeecC--CCeEEEEeHHHH
Q 013444 263 RKSSDLGL--G-GMRREYLQTD-----------CAINAGNSGGPLVNI-DG--EIVGINIMKVAAA--DGLSFAVPIDSA 323 (443)
Q Consensus 263 ~~~~~~~~--~-~~~~~~i~~d-----------~~i~~G~SGGPlvd~-~G--~VVGI~s~~~~~~--~g~~~aIPi~~i 323 (443)
...+.... . ......+... ...|.|+|||||+-. +| .++||++++..-. ..-+.+.-+...
T Consensus 163 ~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~~~~~~~C~GDsGgPL~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~y 242 (252)
T 1rtf_B 163 SSRCTSQHLLNRTVTDNMLCAGDTRSGGPQANLHDACQGDSGGPLVCLNDGRMTLVGIISWGLGCGQKDVPGVYTKVTNY 242 (252)
T ss_dssp GGGSSTTTTTTCCCCTTEEEEECCC------CCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGG
T ss_pred HHHhhhhhccCCCCCCCEEEecCCCCCCccCCCCccccCCCcCceEEEeCCcEEEEEEEEEcCCCCCCCCCeEEEEHHHH
Confidence 43332111 1 1122345442 468999999999943 45 6999999875311 123455667777
Q ss_pred HHHHHHH
Q 013444 324 AKIIEQF 330 (443)
Q Consensus 324 ~~~l~~l 330 (443)
+++|++.
T Consensus 243 ~~WI~~~ 249 (252)
T 1rtf_B 243 LDWIRDN 249 (252)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 7777654
No 95
>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B 1qrz_A
Probab=99.38 E-value=3.9e-11 Score=113.65 Aligned_cols=186 Identities=19% Similarity=0.229 Sum_probs=114.1
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEE
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVL 204 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d---------g~~~~a~vv 204 (443)
-.|.+|.|.... +...|+|.+|+++ ||||+|||+.+... ...+.|.+.. .+.+...-+
T Consensus 28 ~~Pw~v~l~~~~-------~~~~CgGsLIs~~-~VLTAAHC~~~~~~-----~~~~~v~~G~~~~~~~~~~~~~~~v~~~ 94 (247)
T 1ddj_A 28 SWPWQVSLRTRF-------GMHFCGGTLISPE-WVLTAAHCLEKSPR-----PSSYKVILGAHQEVNLEPHVQEIEVSRL 94 (247)
T ss_dssp SSTTEEEEECTT-------SCEEEEEEEEETT-EEEECGGGGTTCSC-----GGGCEEEESCSBSSSCCTTCEEEEEEEE
T ss_pred CCCcEEEEEcCC-------CCeEEEEEEeeCC-EEEEcHHHcCCCCC-----CccEEEEEcccccCccCCceEEEEeeeE
Confidence 357889887432 1257999999988 99999999975321 1234455432 234444445
Q ss_pred eecC-CCCEEEEEEcCCC----CCCccccCCCC-CCCCCCEEEEEecCCCCC----CceEEEEEEeeecCccCC---CCC
Q 013444 205 NADF-HSDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPHSLQ----NTVTAGIVSCVDRKSSDL---GLG 271 (443)
Q Consensus 205 ~~d~-~~DlAlLkl~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~~----~~~t~G~Vs~~~~~~~~~---~~~ 271 (443)
..++ .+|||||+|+.+. .+.|+.|.... .+..++.++++||..... ..+....+.-+....+.. ...
T Consensus 95 ~~hp~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~ 174 (247)
T 1ddj_A 95 FLEPTRKDIALLKLSSPAVITDKVIPACLPSPNYVVADRTECFITGWGETQGTFGAGLLKEAQLPVIENKVCNRYEFLNG 174 (247)
T ss_dssp EECTTSCSCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEECCCCSSSTTTTBCEEEEEEEECHHHHTSTTTTTT
T ss_pred EcCCCCCcEEEEEeCCceeeCCCEEeeecCCcccCCCCCCEEEEEEcccCCCCCCCccceEEeeeecCHHHhcchhccCC
Confidence 5554 5899999998762 34566675432 356789999999976422 233333343333322211 011
Q ss_pred CccceEEEEc-----ccCCCCCccceeeecC-C--CEEEEEEEEeecC--CCeEEEEeHHHHHHHHHHHHH
Q 013444 272 GMRREYLQTD-----CAINAGNSGGPLVNID-G--EIVGINIMKVAAA--DGLSFAVPIDSAAKIIEQFKK 332 (443)
Q Consensus 272 ~~~~~~i~~d-----~~i~~G~SGGPlvd~~-G--~VVGI~s~~~~~~--~g~~~aIPi~~i~~~l~~l~~ 332 (443)
......+... ...|.|+|||||+-.+ | .++||++++..-. ..-+.+.-+....++|++..+
T Consensus 175 ~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI~~~~~ 245 (247)
T 1ddj_A 175 RVQSTELCAGHLAGGTDSCQGDAGGPLVCFEKDKYILQGVTSWGLGCARPNKPGVYVRVSRFVTWIEGVMR 245 (247)
T ss_dssp CCCTTEEEESCSSSCCCBCCSCTTCEEEEECSSSEEEEEEECGGGCCBBTTBCEEEEEGGGSHHHHHHHHH
T ss_pred CCcCCeEeecCCCCCCccccCcCcCcEEEEECCcEEEEEEEEECCCCCCCCCCEEEEEhHHhHHHHHHHhh
Confidence 1223445543 3579999999999543 4 5999999875311 223455667777777776654
No 96
>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating factor-I, PPAF-I, serine proteas hydrolase; HET: NAG; 1.70A {Holotrichia diomphalia}
Probab=99.38 E-value=3.5e-11 Score=116.02 Aligned_cols=190 Identities=16% Similarity=0.161 Sum_probs=111.1
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC------------------
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD------------------ 195 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d------------------ 195 (443)
-.|.+|.|....... .....|+|.+|+++ ||||+|||+.+.... .....+.|++..
T Consensus 33 ~~Pw~v~l~~~~~~~---~~~~~CgGsLIs~~-~VLTAAHC~~~~~~~--~~~~~~~V~~G~~~~~~~~~~~~~~~~~~~ 106 (278)
T 2olg_A 33 EFPWTAMIGYKNSSN---FEQFACGGSLINNR-YIVTAAHCVAGRVLR--VVGALNKVRLGEWNTATDPDCYGAVRVCVP 106 (278)
T ss_dssp SSTTEEEEEEECTTC---CEEEEEEEEECSSS-EEEECGGGTSTHHHH--HTCEEEEEEESCSBTTCSSCEETTTTEECS
T ss_pred CCCceEEEEEecCCC---CcceeEEEEEEeCC-EEEEhHHhCCCcccc--cccceeEEEeCcccCCCCccccccccccCC
Confidence 458889987543211 01256999999988 999999999641000 001234454421
Q ss_pred --CcEEEEEEEeecC---------CCCEEEEEEcCCC----CCCccccCCCC-CCCCCCEEEEEecCCCCC----CceEE
Q 013444 196 --GRTFEGTVLNADF---------HSDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPHSLQ----NTVTA 255 (443)
Q Consensus 196 --g~~~~a~vv~~d~---------~~DlAlLkl~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~~----~~~t~ 255 (443)
...+..+-+..|+ .+|||||+|+.+. .+.|+.|.... .+..|+.++++||..... .....
T Consensus 107 ~~~~~~~v~~i~~Hp~y~~~~~~~~nDIALl~L~~~v~~~~~v~picLp~~~~~~~~g~~~~v~GWG~t~~~~~~~~l~~ 186 (278)
T 2olg_A 107 DKPIDLGIEETIQHPDYVDGSKDRYHDIALIRLNRQVEFTNYIRPVCLPQPNEEVQVGQRLTVVGWGRTETGQYSTIKQK 186 (278)
T ss_dssp SCCEEECEEEEEECTTCCTTCSSCTTCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESCCSSSCCCCSBCEE
T ss_pred CCceEEeeEEEEECCCCcCCCCCCCCeEEEEEECCCCcCCCCcCccCcCCCCCCcCCCCEEEEEcCCcCCCCCccchhhc
Confidence 2334444444443 4699999998762 35677775443 467899999999976422 22333
Q ss_pred EEEEeeecCccCCCCC----CccceEEEEc----ccCCCCCccceeeec--CC--CEEEEEEEEeecC-CC-eEEEEeHH
Q 013444 256 GIVSCVDRKSSDLGLG----GMRREYLQTD----CAINAGNSGGPLVNI--DG--EIVGINIMKVAAA-DG-LSFAVPID 321 (443)
Q Consensus 256 G~Vs~~~~~~~~~~~~----~~~~~~i~~d----~~i~~G~SGGPlvd~--~G--~VVGI~s~~~~~~-~g-~~~aIPi~ 321 (443)
..+..+....+...+. ......+... ...|.|+|||||+-. +| .++||++++..-. .+ -+.+.-+.
T Consensus 187 ~~~~i~~~~~C~~~~~~~~~~~~~~~~Ca~~~~~~~~C~GDSGGPL~~~~~~~~~~l~GIvS~g~~C~~~~~p~vyt~V~ 266 (278)
T 2olg_A 187 LAVPVVHAEQCAKTFGAAGVRVRSSQLCAGGEKAKDSCGGDSGGPLLAERANQQFFLEGLVSFGATCGTEGWPGIYTKVG 266 (278)
T ss_dssp EEEEBCCGGGGGGGGSSTTCCCCTTEEEECCTTCTTCCCCCTTCEEEEEEGGGEEEEEEEEEECCBCSTTCBCEEEEEGG
T ss_pred ccccccCHHHHHHHhccccccCCCceEeeecCCCCeeCCCccCcceEEEcCCCcEEEEEEEEECCCCCCCCCCcEEeEHH
Confidence 3343333333321111 1123355543 357999999999953 34 5899999974311 11 34456666
Q ss_pred HHHHHHHH
Q 013444 322 SAAKIIEQ 329 (443)
Q Consensus 322 ~i~~~l~~ 329 (443)
...++|++
T Consensus 267 ~y~~WI~~ 274 (278)
T 2olg_A 267 KYRDWIEG 274 (278)
T ss_dssp GGHHHHHT
T ss_pred HHHHHHHH
Confidence 66666653
No 97
>2jde_A Urokinase-type plasminogen activator; plasminogen activation, EGF-like domain, blood coagulation, inhibitor complex, UPA, kringle, zymogen; 2.2A {Homo sapiens} PDB: 2vnt_A*
Probab=99.37 E-value=3.9e-11 Score=115.37 Aligned_cols=190 Identities=19% Similarity=0.201 Sum_probs=115.9
Q ss_pred HhCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEE
Q 013444 133 RVCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTV 203 (443)
Q Consensus 133 ~~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d---------g~~~~a~v 203 (443)
.-.|.+|.|........ ....|+|.+|+++ ||||+|||+.+... ...+.|.+.. +..+..+-
T Consensus 33 ~~~Pw~v~l~~~~~~~~---~~~~CgGtLI~~~-~VLTAAHC~~~~~~-----~~~~~v~~G~~~~~~~~~~~~~~~v~~ 103 (276)
T 2jde_A 33 ENQPWFAAIYRRHRGGS---VTYVCGGSLMSPC-WVISATHCFIDYPK-----KEDYIVYLGRSRLNSNTQGEMKFEVEN 103 (276)
T ss_dssp GGSTTEEEEEEECCCCC---EEEEEEEEEEETT-EEEECGGGTTTSCC-----GGGEEEEESCCBSSSCCTTCEEEEEEE
T ss_pred CCCCeEEEEEEecCCCc---cceeeeeEEeeCC-EEEEcHHhccCCCC-----cccEEEEecccccCCCCCCcEEEEEEE
Confidence 34788999975432211 1256999999988 99999999975321 2345555532 23455555
Q ss_pred EeecCC---------CCEEEEEEcCC--------CCCCccccCCC-CCCCCCCEEEEEecCCCC------CCceEEEEEE
Q 013444 204 LNADFH---------SDIAIVKINSK--------TPLPAAKLGTS-SKLCPGDWVVAMGCPHSL------QNTVTAGIVS 259 (443)
Q Consensus 204 v~~d~~---------~DlAlLkl~~~--------~~~~~~~l~~s-~~~~~G~~V~~iG~p~~~------~~~~t~G~Vs 259 (443)
+..|+. +|||||+++.+ ..+.++.|... ..+..|+.+++.||.... ...+....+.
T Consensus 104 i~~hp~y~~~~~~~~~DIALl~L~~~~~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~ 183 (276)
T 2jde_A 104 LILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVK 183 (276)
T ss_dssp EEECTTCEECSSCEESCCEEEEEECTTSCCCCCBTTBCCCBCCBTTBCCCTTCEEEEEESCCSSTTCSCCCSBCEEEEEE
T ss_pred EEECCCCCCCCCcCCCcEEEEEeCCccccccccCCceEccCCCCcccCCCCCCEEEEEECCccCCCCcccchhhhhceec
Confidence 555553 59999999865 23456666432 356679999999997642 2233444444
Q ss_pred eeecCccCCC--CC-CccceEEEEc-----ccCCCCCccceeeec-CC--CEEEEEEEEeecC--CCeEEEEeHHHHHHH
Q 013444 260 CVDRKSSDLG--LG-GMRREYLQTD-----CAINAGNSGGPLVNI-DG--EIVGINIMKVAAA--DGLSFAVPIDSAAKI 326 (443)
Q Consensus 260 ~~~~~~~~~~--~~-~~~~~~i~~d-----~~i~~G~SGGPlvd~-~G--~VVGI~s~~~~~~--~g~~~aIPi~~i~~~ 326 (443)
.+....+... +. ......+... ...|.|+|||||+-. +| .++||++++..-. ..-+.+.-+....++
T Consensus 184 ~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~W 263 (276)
T 2jde_A 184 LISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPW 263 (276)
T ss_dssp EECHHHHTSTTTTGGGSCTTEEEEECTTSCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHH
T ss_pred ccChHHhCcccccCccCCCCeEEecCCCCCCcccccccCcceEEEeCCcEEEEEEEEECCCCCCCCCCeEEEEHHHHHHH
Confidence 3333332211 11 1123345542 467999999999943 34 4999999975311 123556777777777
Q ss_pred HHHHH
Q 013444 327 IEQFK 331 (443)
Q Consensus 327 l~~l~ 331 (443)
|++..
T Consensus 264 I~~~~ 268 (276)
T 2jde_A 264 IRSHT 268 (276)
T ss_dssp HHHTC
T ss_pred HHHHh
Confidence 76643
No 98
>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic resolution, hydrolase/hydrolase inhibitor complex; 1.20A {Pontastacus leptodactylus} SCOP: b.47.1.2
Probab=99.37 E-value=3.2e-11 Score=113.53 Aligned_cols=187 Identities=14% Similarity=0.131 Sum_probs=112.1
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC-------C--cEEEEEEE
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD-------G--RTFEGTVL 204 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d-------g--~~~~a~vv 204 (443)
-.|.+|.|...... + ....|+|.+|+++ +|||+|||+.+... .....+.|.+.. + +.+..+-+
T Consensus 11 ~~Pw~v~l~~~~~~-~---~~~~CgGtLIs~~-~VLTAAHC~~~~~~---~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i 82 (237)
T 2f91_A 11 EFPYQLSFQETFIG-F---SFHFCGASIYNEN-YAITAGHCVYGDDY---ENPSGLQIVAGELDMSVNEGSEQIITVSKI 82 (237)
T ss_dssp TSTTEEEEEEEETT-E---EEEEEEEEEEETT-EEEECGGGTTTSCT---TSCCSEEEEESCSBTTSCCSCCEEEEEEEE
T ss_pred CCCcEEEEEEecCC-C---CcceEEEEEeeCC-EEEEcHHhCCCCcc---CCcccEEEEECCeeccCCCCccEEEEEEEE
Confidence 35778888754211 1 0023999999988 99999999975311 012345666532 2 45566656
Q ss_pred eecC-------CCCEEEEEEcCCC----CCCccccCCCCCCCCCCEEEEEecCCCCC-----CceEEEEEEeeecCccC-
Q 013444 205 NADF-------HSDIAIVKINSKT----PLPAAKLGTSSKLCPGDWVVAMGCPHSLQ-----NTVTAGIVSCVDRKSSD- 267 (443)
Q Consensus 205 ~~d~-------~~DlAlLkl~~~~----~~~~~~l~~s~~~~~G~~V~~iG~p~~~~-----~~~t~G~Vs~~~~~~~~- 267 (443)
..|+ .+|||||+|+.+. .+.|+.|... ....++.++++||..... ..+....+.-+....+.
T Consensus 83 ~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~-~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~ 161 (237)
T 2f91_A 83 ILHENFDYNLLDNDISLLKLSGSLTFNDNVAPIALPEQ-GHTATGDVIVTGWGTTSEGGNTPDVLQKVTVPLVSDEDCRA 161 (237)
T ss_dssp EECTTCCTTTCTTCCEEEEESSCCCCBTTBCCCBCCCT-TCCCCSEEEEEESCCSSTTCCCCSBCEEEEEEEECHHHHHH
T ss_pred EECCCCCCCCCCCcEEEEEECCCcccCCceeeccCCCC-CCCCCCcEEEEECCcCCCCCCccceeeEEEEeEcCHHHhhh
Confidence 6665 3699999999763 3567777553 346789999999975421 23334344333322221
Q ss_pred -CCCCCccceEEEEc-----ccCCCCCccceeeecCC---CEEEEEEEEeecC--CCeEEEEeHHHHHHHHHH
Q 013444 268 -LGLGGMRREYLQTD-----CAINAGNSGGPLVNIDG---EIVGINIMKVAAA--DGLSFAVPIDSAAKIIEQ 329 (443)
Q Consensus 268 -~~~~~~~~~~i~~d-----~~i~~G~SGGPlvd~~G---~VVGI~s~~~~~~--~g~~~aIPi~~i~~~l~~ 329 (443)
+.........+... ...|.|+|||||+-.++ .++||++++..-. ..-+.+.-+...+++|++
T Consensus 162 ~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~ 234 (237)
T 2f91_A 162 DYGADEILDSMICAGVPEGGKDSCQGDSGGPLAASDTGSTYLAGIVSWGYGCARPGYPGVYTEVSYHVDWIKA 234 (237)
T ss_dssp HHCTTTSCTTEEEECCTTCCCBCCTTCTTCEEEECTTSSCEEEEEEEEESSSSCTTCCEEEEEGGGSHHHHHH
T ss_pred hhCCCCcCCCeEEEecCCCCCCCCCCcCCCCeEEecCCCEEEEEEEEecCCCCCCCCCcEEEEHHHhHHHHHH
Confidence 11011123455542 45799999999995432 7999999975311 123445666666666654
No 99
>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood coagulation, BLOO clotting, convertion of fibrinogen to fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB: 1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H* 1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H* 1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ...
Probab=99.37 E-value=9.8e-12 Score=118.03 Aligned_cols=191 Identities=15% Similarity=0.125 Sum_probs=110.0
Q ss_pred CCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCCC----------cEEEEEEE
Q 013444 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDG----------RTFEGTVL 204 (443)
Q Consensus 135 ~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~dg----------~~~~a~vv 204 (443)
.|.+|.|..... ....|+|.+|+++ +|||+|||+.............+.|.+... +....+-+
T Consensus 12 ~Pw~v~l~~~~~------~~~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~v~~i 84 (259)
T 3rm2_H 12 SPWQVMLFRKSP------QELLCGASLISDR-WVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKI 84 (259)
T ss_dssp STTEEEEEEETT------EEEEEEEEECSSS-EEEECGGGTEEGGGTEECCGGGEEEEESCCBSSSCCTTTCEEEEEEEE
T ss_pred cCCEEEEEECCC------CceEEEEEEEeCC-EEEEcHHhCcccccccccCcccEEEEECcccccccccCcceeeEEEEE
Confidence 578888853321 1256999999988 999999999532111111123556665421 22224444
Q ss_pred eecC--------CCCEEEEEEcCCC----CCCccccCCCC----CCCCCCEEEEEecCCCCC-----------CceEEEE
Q 013444 205 NADF--------HSDIAIVKINSKT----PLPAAKLGTSS----KLCPGDWVVAMGCPHSLQ-----------NTVTAGI 257 (443)
Q Consensus 205 ~~d~--------~~DlAlLkl~~~~----~~~~~~l~~s~----~~~~G~~V~~iG~p~~~~-----------~~~t~G~ 257 (443)
..|+ .+|||||+|+.+. .+.|+.|.... .+..|..+.+.||..... ..+....
T Consensus 85 ~~hp~y~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~~~~~~l~~~~ 164 (259)
T 3rm2_H 85 YIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVN 164 (259)
T ss_dssp EECTTCBTTTTCBTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHCCTTCEEEEEESCCSSCC-------CCCSBCEEEE
T ss_pred EECCCCCCCCCCCCcEEEEEeCCceEcCCCcccccCCCccccccccCCCCEEEEeecCCCcCcCCccccccccccceEEE
Confidence 4443 3499999998753 34566664322 135799999999986321 1223333
Q ss_pred EEeeecCccCCCCC-CccceEEEEc--------ccCCCCCccceeeec---CC--CEEEEEEEEeecC--CCeEEEEeHH
Q 013444 258 VSCVDRKSSDLGLG-GMRREYLQTD--------CAINAGNSGGPLVNI---DG--EIVGINIMKVAAA--DGLSFAVPID 321 (443)
Q Consensus 258 Vs~~~~~~~~~~~~-~~~~~~i~~d--------~~i~~G~SGGPlvd~---~G--~VVGI~s~~~~~~--~g~~~aIPi~ 321 (443)
+..+....+...+. ......++.. ...|.|+|||||+-. +| .++||++++..-. ..-+.+.-+.
T Consensus 165 ~~~~~~~~C~~~~~~~~~~~~~Cag~~~~~~~~~~~C~GDsGgPL~~~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~ 244 (259)
T 3rm2_H 165 LPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVF 244 (259)
T ss_dssp EEBCCHHHHHHTCSSCCCTTEEEECCCGGGSCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSCTTCCEEEEETG
T ss_pred EEEeCHHHhhhhhcccCCCceEeeeccCCCCCCCcccCCCCCCeeEEEECCCCCEEEEEEEEECCCCCCCCCCeEEEEHH
Confidence 33222222211111 1123355542 268999999999853 23 6899999975321 1235566777
Q ss_pred HHHHHHHHHHH
Q 013444 322 SAAKIIEQFKK 332 (443)
Q Consensus 322 ~i~~~l~~l~~ 332 (443)
..+++|++..+
T Consensus 245 ~~~~WI~~~i~ 255 (259)
T 3rm2_H 245 RLKKWIQKVID 255 (259)
T ss_dssp GGHHHHHHHHH
T ss_pred HhHHHHHHHHH
Confidence 77777766543
No 100
>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin membrane, disulfide bond, glycoprotein, hydrolase, membrane protease, secreted; 1.30A {Homo sapiens} PDB: 3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A 3dfl_A*
Probab=99.37 E-value=2e-11 Score=116.19 Aligned_cols=184 Identities=18% Similarity=0.192 Sum_probs=112.9
Q ss_pred CCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEEe
Q 013444 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVLN 205 (443)
Q Consensus 135 ~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d---------g~~~~a~vv~ 205 (443)
.|.+|.|.... ...|+|.+|+++ +|||+|||+..... ...+.|.+.. .+.+..+-+.
T Consensus 12 ~Pw~v~l~~~~--------~~~CgGtLI~~~-~VLTAAhC~~~~~~-----~~~~~v~~g~~~~~~~~~~~~~~~v~~i~ 77 (261)
T 3gyl_B 12 WPWQVSITYEG--------VHVCGGSLVSEQ-WVLSAAHCFPSEHH-----KEAYEVKLGAHQLDSYSEDAKVSTLKDII 77 (261)
T ss_dssp STTEEEEEETT--------EEEEEEEECSSS-EEEECGGGSCTTSC-----GGGEEEEESCSBTTSCCSSCEEECEEEEE
T ss_pred CCcEEEEeeCC--------ceEEEEEEEcCC-EEEECHHHCCCCCC-----cccEEEEeCceeccCCCCCceEEEEEEEE
Confidence 57788886432 256999999988 99999999964221 2345566542 2345555566
Q ss_pred ecCC-------CCEEEEEEcCCC----CCCccccCCC-CCCCCCCEEEEEecCCCC-------CCceEEEEEEeeecCcc
Q 013444 206 ADFH-------SDIAIVKINSKT----PLPAAKLGTS-SKLCPGDWVVAMGCPHSL-------QNTVTAGIVSCVDRKSS 266 (443)
Q Consensus 206 ~d~~-------~DlAlLkl~~~~----~~~~~~l~~s-~~~~~G~~V~~iG~p~~~-------~~~~t~G~Vs~~~~~~~ 266 (443)
.|+. +|||||+|+.+. .+.++.|... ..+..|+.+++.||.... ...+....+..+....+
T Consensus 78 ~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~~l~~~~~~~~~~~~C 157 (261)
T 3gyl_B 78 PHPSYLQEGSQGDIALLQLSRPITFSRYIRPISLPAAQASFPNGLHCTVTGWGHVAPSVSLLTPKPLQQLEVPLISRETC 157 (261)
T ss_dssp ECTTCCSTTCSCCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESSCSBTTBCCCTTCBCEEEEEEEECHHHH
T ss_pred ECCCcCCCCCCCcEEEEEECCCccCCCceeccCCCCcccCCCCCCEEEEEecCCCCCCCCccCCccceEEEEEEECHHHh
Confidence 6654 499999998753 3456666432 345679999999997532 12233333333332222
Q ss_pred CC--C-------CCCccceEEEEc-----ccCCCCCccceeeec-CC--CEEEEEEEEeecC--CCeEEEEeHHHHHHHH
Q 013444 267 DL--G-------LGGMRREYLQTD-----CAINAGNSGGPLVNI-DG--EIVGINIMKVAAA--DGLSFAVPIDSAAKII 327 (443)
Q Consensus 267 ~~--~-------~~~~~~~~i~~d-----~~i~~G~SGGPlvd~-~G--~VVGI~s~~~~~~--~g~~~aIPi~~i~~~l 327 (443)
.. . .......+++.. ...|.|+|||||+-. +| .++||++++..-. ..-+.+.-+...+++|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~v~~~~~WI 237 (261)
T 3gyl_B 158 NSLYNIDAKPEEPHFVQEDMVCAGYVEGGKDACQGDSGGPLSCPVEGLWYLTGIVSWGDACGARNRPGVYTLASSYASWI 237 (261)
T ss_dssp HHHHTTTCCTTCCCCCCTTEEEESCSSSSCBCCTTTTTCEEEEEETTEEEEEEEECCCCCSSCTTCCEEEEEGGGGHHHH
T ss_pred hhhhcccccccccccccCCeEeeCCCCCCCccCCCCCCCeeEEEeCCEEEEEEEEecCCCCCCCCCCCEEEEHHHhHHHH
Confidence 10 0 011123345542 457999999999954 35 5999999874311 2235567777777777
Q ss_pred HHHHH
Q 013444 328 EQFKK 332 (443)
Q Consensus 328 ~~l~~ 332 (443)
++..+
T Consensus 238 ~~~i~ 242 (261)
T 3gyl_B 238 QSKVT 242 (261)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 66543
No 101
>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A* 2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D 2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B* 1lqd_B* 1nfu_A* 1nfw_A* ...
Probab=99.36 E-value=9.5e-12 Score=117.36 Aligned_cols=182 Identities=22% Similarity=0.253 Sum_probs=112.4
Q ss_pred CCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEEe
Q 013444 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVLN 205 (443)
Q Consensus 135 ~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d---------g~~~~a~vv~ 205 (443)
.|.+|.|.... +...|+|.+|+++ +|||+|||+.+. ..+.|.+.. .+.+..+.+.
T Consensus 12 ~Pw~v~l~~~~-------~~~~CgGtLIs~~-~VLTAAhC~~~~--------~~~~V~~G~~~~~~~~~~~~~~~v~~i~ 75 (241)
T 2jkh_A 12 CPWQALLINEE-------NEGFCGGTILSEF-YILTAAHCLYQA--------KRFKVRVGDRNTEQEEGGEAVHEVEVVI 75 (241)
T ss_dssp STTEEEEECTT-------SCEEEEEEECSSS-EEEECGGGGGSC--------SSCEEEESCSBTTCCCSCCEEECEEEEE
T ss_pred cCcEEEEEcCC-------CCcEEEEEEeeCC-EEEEcHHHcCCC--------CcEEEEECCccCCCCCCCcEEEEeEEEE
Confidence 47788886322 2367999999988 999999999763 234455532 2344555555
Q ss_pred ecC-------CCCEEEEEEcCCC----CCCccccCCCC----CCCCCCEEEEEecCCCCC-----CceEEEEEEeeecCc
Q 013444 206 ADF-------HSDIAIVKINSKT----PLPAAKLGTSS----KLCPGDWVVAMGCPHSLQ-----NTVTAGIVSCVDRKS 265 (443)
Q Consensus 206 ~d~-------~~DlAlLkl~~~~----~~~~~~l~~s~----~~~~G~~V~~iG~p~~~~-----~~~t~G~Vs~~~~~~ 265 (443)
.|+ .+|||||+|+.+. .+.|+.|.... .+..++.+++.||..... ..+....+..+....
T Consensus 76 ~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~ 155 (241)
T 2jkh_A 76 KHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGEQSTRLKMLEVPYVDRNS 155 (241)
T ss_dssp ECTTCBTTTTBTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHTTTSSEEEEEESCBSSTTSCBCSBCEEEEEEEECHHH
T ss_pred eCCCCCCCCCCCcEEEEEECCcccCCCCEeeeEcCCCCcccccccCCCeEEEEecCCCCCCCCcCccccEeeeccccHHH
Confidence 554 3599999998763 34566665422 245789999999975321 223333333333222
Q ss_pred cCCCCC-CccceEEEEc-----ccCCCCCccceeeec-CC--CEEEEEEEEeecC--CCeEEEEeHHHHHHHHHHHHH
Q 013444 266 SDLGLG-GMRREYLQTD-----CAINAGNSGGPLVNI-DG--EIVGINIMKVAAA--DGLSFAVPIDSAAKIIEQFKK 332 (443)
Q Consensus 266 ~~~~~~-~~~~~~i~~d-----~~i~~G~SGGPlvd~-~G--~VVGI~s~~~~~~--~g~~~aIPi~~i~~~l~~l~~ 332 (443)
+..... ......+... ...|.|+|||||+.. +| .++||++++..-. ...+.+.-+...+++|++..+
T Consensus 156 C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~~ 233 (241)
T 2jkh_A 156 CKLSSSFIITQNMFCAGYDTKQEDACQGDSGGPHVTRFKDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMK 233 (241)
T ss_dssp HHHHCSSCCCTTEEEESCSSSSCBCCTTTTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHTC
T ss_pred hcccccCcCCCCeEEeeCCCCCCccCcCcCCCeeEEEECCEEEEEEEEEECCCCCCCCCceEEEEhHHHHHHHHHHhc
Confidence 211111 1123345442 357999999999954 45 4999999875321 224566777778888877654
No 102
>2bdy_A Thrombin; thrombin, complex structure, hydrolase, hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E* 1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A* 1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A* 1zgi_A* 1zgv_A* 1zrb_A* ...
Probab=99.36 E-value=1.9e-11 Score=118.76 Aligned_cols=192 Identities=15% Similarity=0.133 Sum_probs=112.3
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC----------CcEEEEEE
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD----------GRTFEGTV 203 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d----------g~~~~a~v 203 (443)
-.|.+|.|.... .+...|.|.+|+++ ||||+|||+.............+.|.+.. .+.+..+-
T Consensus 41 ~~Pw~v~l~~~~------~~~~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~~v~~ 113 (289)
T 2bdy_A 41 MSPWQVMLFRKS------PQELLCGASLISDR-WVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEK 113 (289)
T ss_dssp SCTTEEEEEETT------TTEEEEEEEECSSS-EEEECGGGTEEGGGTEECCGGGEEEEESCCBSSSCCTTTCEEEEEEE
T ss_pred CCCCeEEEEECC------CCCEEEEEEEecCC-EEEEcHHhcccCccccccCcccEEEEEccccccccCCCcceeeeeEE
Confidence 468888886432 12357999999988 99999999953110000112345666542 12334444
Q ss_pred EeecC--------CCCEEEEEEcCCC----CCCccccCCCCC----CCCCCEEEEEecCCCCC-----------CceEEE
Q 013444 204 LNADF--------HSDIAIVKINSKT----PLPAAKLGTSSK----LCPGDWVVAMGCPHSLQ-----------NTVTAG 256 (443)
Q Consensus 204 v~~d~--------~~DlAlLkl~~~~----~~~~~~l~~s~~----~~~G~~V~~iG~p~~~~-----------~~~t~G 256 (443)
+..|+ .+|||||+|+.+. .+.|+.|..... +..|..+++.||..... ..+...
T Consensus 114 i~~Hp~y~~~~~~~~DIALl~L~~pv~~~~~v~picLp~~~~~~~~~~~g~~~~v~GWG~~~~~~~~~~~~~~~~~L~~~ 193 (289)
T 2bdy_A 114 IYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVV 193 (289)
T ss_dssp EEECTTCBTTTTCBTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHCCTTCEEEEEESSCSSCC-------CCCSBCEEE
T ss_pred EEECCCCCCCCCCCCeEEEEEECCccccCCcccccCCCCccccccccCCCCEEEEECCCcCCCccccCccccccccceEE
Confidence 44443 3599999998763 345677754321 46799999999975321 123333
Q ss_pred EEEeeecCccCCCCC-CccceEEEEc--------ccCCCCCccceeeec---CC--CEEEEEEEEeecC--CCeEEEEeH
Q 013444 257 IVSCVDRKSSDLGLG-GMRREYLQTD--------CAINAGNSGGPLVNI---DG--EIVGINIMKVAAA--DGLSFAVPI 320 (443)
Q Consensus 257 ~Vs~~~~~~~~~~~~-~~~~~~i~~d--------~~i~~G~SGGPlvd~---~G--~VVGI~s~~~~~~--~g~~~aIPi 320 (443)
.+.-+....+...+. .....+|... ...|.|+|||||+-. +| .++||++++..=. ..-+.+.-+
T Consensus 194 ~v~i~~~~~C~~~~~~~i~~~~iCag~~~~~~~~~~~C~GDSGGPLv~~~~~~~~~~l~GIvS~g~~C~~~~~p~vyt~V 273 (289)
T 2bdy_A 194 NLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHV 273 (289)
T ss_dssp EEEBCCHHHHHHTCSSCCCTTEEEECCCGGGCCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSCTTCCEEEEET
T ss_pred EEEEECHHHhhccccCcCCCCEEeccCCCCCCCCCccCCCCCccceEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEH
Confidence 333222222211111 1123455552 358999999999843 34 4899999975311 123556777
Q ss_pred HHHHHHHHHHHH
Q 013444 321 DSAAKIIEQFKK 332 (443)
Q Consensus 321 ~~i~~~l~~l~~ 332 (443)
...+++|++..+
T Consensus 274 ~~y~~WI~~~i~ 285 (289)
T 2bdy_A 274 FRLKKWIQKVID 285 (289)
T ss_dssp GGGHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 777888876654
No 103
>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine proteinase, C-terminal peptidase; 2.35A {Bos taurus} SCOP: b.47.1.2
Probab=99.36 E-value=3.8e-11 Score=114.01 Aligned_cols=184 Identities=19% Similarity=0.236 Sum_probs=111.7
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC----------CcEEEEEE
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD----------GRTFEGTV 203 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d----------g~~~~a~v 203 (443)
-.|.+|.|...... .....|+|.+|+++ +|||+|||+.+. ..+.|.+.. .+.+..+.
T Consensus 24 ~~Pw~v~l~~~~~~----~~~~~CgGtLIs~~-~VLTAAHC~~~~--------~~~~V~~G~~~~~~~~~~~~~~~~v~~ 90 (251)
T 1pyt_D 24 SWPWQISLQYLRDN----TWRHTCGGTLITPN-HVLTAAHCISNT--------LTYRVALGKNNLEVEDEAGSLYVGVDT 90 (251)
T ss_dssp SSTTEEEEEEEETT----EEEEEEEEEEEETT-EEEECGGGCCTT--------CCEEEEESCSBTTCSCCSSCEEEEEEE
T ss_pred CCCceEEEEEEcCC----CcceEEEeEEecCC-EEEECHHHhCCC--------ceEEEEEcccccccCCCCCcEEEEEEE
Confidence 46888988754321 12256999999988 999999999752 345555532 13455555
Q ss_pred EeecC-------CCCEEEEEEcCCC----CCCccccCCCC-CCCCCCEEEEEecCCCCC-----CceEEEEEEeeecCcc
Q 013444 204 LNADF-------HSDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPHSLQ-----NTVTAGIVSCVDRKSS 266 (443)
Q Consensus 204 v~~d~-------~~DlAlLkl~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~~-----~~~t~G~Vs~~~~~~~ 266 (443)
+..|+ .+|||||+|+.+. .+.|+.|.... .+..+..++++||..... ..+....+..+....+
T Consensus 91 i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C 170 (251)
T 1pyt_D 91 IFVHEKWNSFLVRNDIALIKLAETVELGDTIQVACLPSEGSLLPQDYPCFVTGWGRLYTNGPIAAELQQGLQPVVDYATC 170 (251)
T ss_dssp EEECTTCBTTTTBSCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEECBCCCSSCCSCCCSBCBCCEEECBCHHHH
T ss_pred EEECCCCCCCCCCCCEEEEEECCCcccCCCeeeeEcCCCcccCCCCCEEEEEecccCCCCCCcccchheeEeEeeCHHHc
Confidence 55554 3699999998763 35577775433 356789999999976422 1222222322222222
Q ss_pred CCCC--C-CccceEEEEc----ccCCCCCccceeeec-CC--CEEEEEEEEee-cC---CCeEEEEeHHHHHHHHHHH
Q 013444 267 DLGL--G-GMRREYLQTD----CAINAGNSGGPLVNI-DG--EIVGINIMKVA-AA---DGLSFAVPIDSAAKIIEQF 330 (443)
Q Consensus 267 ~~~~--~-~~~~~~i~~d----~~i~~G~SGGPlvd~-~G--~VVGI~s~~~~-~~---~g~~~aIPi~~i~~~l~~l 330 (443)
.... . ......|... ...|.|+|||||+-. +| .++||++++.. .. ..-+.+.-+....++|++.
T Consensus 171 ~~~~~~~~~~~~~~~Ca~~~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~ 248 (251)
T 1pyt_D 171 SQRDWWGTTVKETMVCAGGDGVISACNGDSGGPLNCQADGQWDVRGIVSFGSGLSCNTFKKPTVFTRVSAYIDWINQK 248 (251)
T ss_dssp TSTTTTTTTCCTTEEEECCSCSSCCCCSCTTCEEEEESSSSEEEEEEEEECCSSCTTBTTBCEEEEEGGGGHHHHHHH
T ss_pred chhhccCCCcCCCeEEecCCCCCccCCCCCCCceEEEECCCEEEEEEEEECCCCCCCCCCCCeEEEEHHHHHHHHHHH
Confidence 1110 1 1123355543 357999999999954 45 59999999752 11 1234556666667776654
No 104
>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation, hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC; 1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A* 2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A* 3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A*
Probab=99.35 E-value=1.8e-11 Score=115.82 Aligned_cols=188 Identities=18% Similarity=0.212 Sum_probs=113.0
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC------CcEEEEEEEeec
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD------GRTFEGTVLNAD 207 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d------g~~~~a~vv~~d 207 (443)
-.|.+|.|...... ....|+|.+|+++ +|||+|||+..... ....+.|.+.. ++.+..+-+..|
T Consensus 11 ~~Pw~v~l~~~~~~-----~~~~CgGtLIs~~-~VLTAAHC~~~~~~----~~~~~~v~~g~~~~~~~~~~~~v~~i~~H 80 (245)
T 2f9n_A 11 KWPWQVSLRVRDRY-----WMHFCGGSLIHPQ-WVLTAAHCVGPDVK----DLATLRVQLREQHLYYQDQLLPVSRIIVH 80 (245)
T ss_dssp SCTTEEEEEEESSS-----EEEEEEEEEEETT-EEEECGGGGCSSCC----CGGGEEEECSCSBTTTTCCCBCEEEEEEC
T ss_pred CCCcEEEEEEcCCC-----cceEEEEEEeeCC-EEEECHHhCCCCCC----CcceEEEEeCCcccccCceEEEEEEEEEC
Confidence 35788988754221 1257999999988 99999999964211 12356666542 234445555555
Q ss_pred CC-------CCEEEEEEcCCC----CCCccccCCC-CCCCCCCEEEEEecCCCCCC-------ceEEEEEEeeecCccCC
Q 013444 208 FH-------SDIAIVKINSKT----PLPAAKLGTS-SKLCPGDWVVAMGCPHSLQN-------TVTAGIVSCVDRKSSDL 268 (443)
Q Consensus 208 ~~-------~DlAlLkl~~~~----~~~~~~l~~s-~~~~~G~~V~~iG~p~~~~~-------~~t~G~Vs~~~~~~~~~ 268 (443)
+. +|||||+|+.+. .+.++.|... ..+..|+.++++||...... .+....+.-+....+..
T Consensus 81 p~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~~L~~~~~~~~~~~~C~~ 160 (245)
T 2f9n_A 81 PQFYIIQTGADIALLELEEPVNISSRVHTVMLPPASETFPPGMPCWVTGWGDVDNDEPLPPPFPLKQVKVPIMENHICDA 160 (245)
T ss_dssp TTCCSSCCTTCCEEEEESSCCCCCSSSCCCBCCCTTCCCCTTCCEEEEESCCSBTTBCCCTTCBCEEEECCEECHHHHHH
T ss_pred CCccCCCCCCcEEEEEeCCCCcCCCCccccCCCCcccCCCCCCEEEEEEeCCCCCCCCCCccccceEEEEEEcCHHHhhh
Confidence 43 599999999763 3556777543 34568999999999753211 22333222222211110
Q ss_pred --CC--------CCccceEEEE---cccCCCCCccceeeec-CC--CEEEEEEEEeecC--CCeEEEEeHHHHHHHHHHH
Q 013444 269 --GL--------GGMRREYLQT---DCAINAGNSGGPLVNI-DG--EIVGINIMKVAAA--DGLSFAVPIDSAAKIIEQF 330 (443)
Q Consensus 269 --~~--------~~~~~~~i~~---d~~i~~G~SGGPlvd~-~G--~VVGI~s~~~~~~--~g~~~aIPi~~i~~~l~~l 330 (443)
.. .......+.. ....|.|+|||||+-. +| .++||++++..-. ..-+.+.-+...+++|++.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~Ca~~~~~~~C~GDSGgPL~~~~~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI~~~ 240 (245)
T 2f9n_A 161 KYHLGAYTGDDVRIIRDDMLCAGNSQRDSCQGDSGGPLVCKVNGTWLQAGVVSWGEGCAQPNRPGIYTRVTYYLDWIHHY 240 (245)
T ss_dssp HHHTTCCSCTTSCCSCTTEEEECCSSSBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSBTTBCEEEEEGGGGHHHHHHH
T ss_pred hhcccccccccccccccccEeecCCCCCcCCCCCCCceEEEECCEEEEEEEEEeCCCCCCCCCCeEEEEHHHHHHHHHHH
Confidence 00 0112234444 2457999999999954 46 5899999875311 2235567777777777765
Q ss_pred H
Q 013444 331 K 331 (443)
Q Consensus 331 ~ 331 (443)
.
T Consensus 241 ~ 241 (245)
T 2f9n_A 241 V 241 (245)
T ss_dssp S
T ss_pred h
Confidence 4
No 105
>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase; 1.90A {Homo sapiens} PDB: 1ekb_B
Probab=99.35 E-value=2.2e-11 Score=114.17 Aligned_cols=183 Identities=17% Similarity=0.193 Sum_probs=110.6
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC----------CcEEEEEE
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD----------GRTFEGTV 203 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d----------g~~~~a~v 203 (443)
-.|.+|.|.... ...|+|.+|+++ +|||+|||+.+... ....+.+.+.. ...+..+-
T Consensus 11 ~~Pw~v~l~~~~--------~~~CgGtLI~~~-~VLTAAHC~~~~~~----~~~~~~v~~g~~~~~~~~~~~~~~~~v~~ 77 (235)
T 4dgj_A 11 AWPWVVGLYYDD--------RLLCGASLVSSD-WLVSAAHCVYGRNL----EPSKWTAILGLHMKSNLTSPQTVPRLIDE 77 (235)
T ss_dssp SSTTEEEEEETT--------EEEEEEEECSSS-EEEECHHHHTTSCS----SGGGEEEEESCCBTTCCSCTTCEEEEEEE
T ss_pred CCCcEEEEeeCC--------CeEEEEEEeeCC-EEEECHHhcCCCCC----CCccEEEEEeeecccccCCCceeEEeEEE
Confidence 357888887432 256999999988 99999999964211 12345555431 23344555
Q ss_pred EeecCC-------CCEEEEEEcCCC----CCCccccCCCC-CCCCCCEEEEEecCCCC-----CCceEEEEEEeeecCcc
Q 013444 204 LNADFH-------SDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPHSL-----QNTVTAGIVSCVDRKSS 266 (443)
Q Consensus 204 v~~d~~-------~DlAlLkl~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~-----~~~~t~G~Vs~~~~~~~ 266 (443)
+..|+. +|||||+++.+. .+.++.|.... .+..|+.+++.||.... ...+....+..+....+
T Consensus 78 i~~hp~y~~~~~~~DiALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C 157 (235)
T 4dgj_A 78 IVINPHYNRRRKDNDIAMMHLEFKVNYTDYIQPISLPEENQVFPPGRNCSIAGWGTVVYQGTTADILQEADVPLLSNERC 157 (235)
T ss_dssp EEECTTCBTTTTBTCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESSBSSTTCCBCSBCEEEEEEEECHHHH
T ss_pred EEECCCCCCCCCCCeEEEEEECCccccCCcccccCCCCcccCCCCCCEEEEEecccCCCCCccchhheEeEeeecCHHHh
Confidence 556654 699999998753 34567775433 35689999999997532 12233344433333222
Q ss_pred CCCC--CCccceEEEEc-----ccCCCCCccceeeecC-C--CEEEEEEEEeecC--CCeEEEEeHHHHHHHHHH
Q 013444 267 DLGL--GGMRREYLQTD-----CAINAGNSGGPLVNID-G--EIVGINIMKVAAA--DGLSFAVPIDSAAKIIEQ 329 (443)
Q Consensus 267 ~~~~--~~~~~~~i~~d-----~~i~~G~SGGPlvd~~-G--~VVGI~s~~~~~~--~g~~~aIPi~~i~~~l~~ 329 (443)
...+ .......+... ...|.|+|||||+-.+ | .++||++++..-. ..-+.+.-+...+++|++
T Consensus 158 ~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~l~Gi~S~g~~c~~~~~p~vyt~V~~~~~WI~~ 232 (235)
T 4dgj_A 158 QQQMPEYNITENMICAGYEEGGIDSCQGDSGGPLMCQENNRWFLAGVTSFGYECALPNRPGVYARVSRFTEWIQS 232 (235)
T ss_dssp HHHCTTSCCCTTEEEECCTTCCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGTHHHHHT
T ss_pred hhhccCccCCCCeEeecCCCCCCccCCCCCCCeEEEEECCcEEEEEEEEEcCCCCCCCCCEEEeeHHHHHHHHHH
Confidence 1101 01123345542 3579999999999543 4 3999999975321 123455666666666654
No 106
>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase; HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP: b.47.1.2 PDB: 1fiz_A*
Probab=99.35 E-value=9.3e-11 Score=113.96 Aligned_cols=191 Identities=17% Similarity=0.106 Sum_probs=113.8
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC--------------CcEE
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD--------------GRTF 199 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d--------------g~~~ 199 (443)
-.|-+|.|......++ .....|.|.+|+++ ||||+|||+..... ...+.|.+.. .+.+
T Consensus 11 ~~Pw~v~l~~~~~~~~--~~~~~CgGsLIs~~-~VLTAAHC~~~~~~-----~~~~~v~~G~~~~~~~~~~~~~~~~~~~ 82 (290)
T 1fiw_A 11 AWPWMVSLQIFTYHNN--RRYHVCGGSLLNSQ-WLLTAAHCFRIKKK-----VTDWRLIFGAKEVEWGTNKPVKPPLQER 82 (290)
T ss_dssp SSTTEEEEEEEETTTT--EEEEEEEEEEEETT-EEEECGGGGSSCCS-----GGGEEEEESCSBCCTTCCSCCCTTCEEE
T ss_pred CCCcEEEEEEeccCCC--ccceEEEEEEeeCC-EEEECHHhCCCCCC-----CcceEEEecceEEeccCCCcCCCCceEE
Confidence 3578888875321111 11256999999988 99999999975321 1234555421 2344
Q ss_pred EEEEEeecCC-------CCEEEEEEcCCC----CCCccccCCCC--CCCCCCEEEEEecCCCCC------CceEEEEEEe
Q 013444 200 EGTVLNADFH-------SDIAIVKINSKT----PLPAAKLGTSS--KLCPGDWVVAMGCPHSLQ------NTVTAGIVSC 260 (443)
Q Consensus 200 ~a~vv~~d~~-------~DlAlLkl~~~~----~~~~~~l~~s~--~~~~G~~V~~iG~p~~~~------~~~t~G~Vs~ 260 (443)
..+-+..|+. +|||||+|+.+. .+.++.|.... ....|+.++++||..... ..+....+..
T Consensus 83 ~V~~i~~Hp~y~~~~~~nDIALl~L~~~v~~~~~v~PicLp~~~~~~~~~~~~~~v~GWG~~~~~~~~~~~~L~~~~v~i 162 (290)
T 1fiw_A 83 YVEKIIIHEKYSASSEANDIALMKITPPVTCGHFIGPGCLPQFRAGPPRVPQTCWVAGWGFLQENARRTSPMLQEARVDL 162 (290)
T ss_dssp EEEEEEECTTCBTTTTBTCCEEEEEESCCCCBTTBCCCBCCCTTCCSCCSSCEEEEEESCCSSTTCSSCCSBCEEEEEEE
T ss_pred EEEEEEECCCCCCCCCCCCEEEEEECCccccCCccccccCCCccccCcCCCCeEEEEEeccCCCCCCCCCceeeEEEEEE
Confidence 4555555543 699999998763 34566675432 234689999999975321 2344444444
Q ss_pred eecCccCCC--C-CCccceEEEEc-----ccCCCCCccceeeecC---C--CEEEEEEEEeecC--CCeEEEEeHHHHHH
Q 013444 261 VDRKSSDLG--L-GGMRREYLQTD-----CAINAGNSGGPLVNID---G--EIVGINIMKVAAA--DGLSFAVPIDSAAK 325 (443)
Q Consensus 261 ~~~~~~~~~--~-~~~~~~~i~~d-----~~i~~G~SGGPlvd~~---G--~VVGI~s~~~~~~--~g~~~aIPi~~i~~ 325 (443)
+....+... + .......|+.. ...|.|+|||||+-.+ | .++||++++..-. ..-+.+.-+...++
T Consensus 163 ~~~~~C~~~~~~~~~i~~~~iCag~~~~~~~~C~GDSGGPLv~~~~~~~~~~l~GIvS~g~~C~~~~~p~vyt~V~~y~~ 242 (290)
T 1fiw_A 163 IDLGLCNSTRWYNGRIRSTNVCAGYPEGKIDTCQGDSGGPLMCKDSAENSYVVVGITSWGVGCARAKRPGVYTSTWSYLN 242 (290)
T ss_dssp ECHHHHTSTTTTTTCCCTTEEEEECTTCSSBCCTTCTTCEEEEECSSSSCEEEEEEEEECSSSSBTTBCEEEEESGGGHH
T ss_pred ecHHHhccccccCCcCCCCEEEEecCCCCCeeCCCCCchheEEEECCCCCEEEEEEEEECCCCCCCCCCeEEEEHHHhHH
Confidence 443333211 1 11223455543 3679999999999543 3 5999999975311 12344566666777
Q ss_pred HHHHHHH
Q 013444 326 IIEQFKK 332 (443)
Q Consensus 326 ~l~~l~~ 332 (443)
+|++..+
T Consensus 243 WI~~~~~ 249 (290)
T 1fiw_A 243 WIASKIG 249 (290)
T ss_dssp HHHHHHC
T ss_pred HHHHHhC
Confidence 7776553
No 107
>2qy0_B Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens} SCOP: b.47.1.2
Probab=99.35 E-value=1.1e-11 Score=116.87 Aligned_cols=186 Identities=17% Similarity=0.164 Sum_probs=109.7
Q ss_pred CCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCCC--------cEEEEEEEee
Q 013444 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDG--------RTFEGTVLNA 206 (443)
Q Consensus 135 ~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~dg--------~~~~a~vv~~ 206 (443)
.|.+|.|.. ...|+|.+|+++ +|||+|||+...... ......+.|.+... ..+..+-+..
T Consensus 12 ~Pw~v~l~~----------~~~CgGtLIs~~-~VLTAAHC~~~~~~~-~~~~~~~~v~~G~~~~~~~~~~~~~~v~~i~~ 79 (242)
T 2qy0_B 12 FPWQVFTNI----------HGRGGGALLGDR-WILTAAHTLYPKEHE-AQSNASLDVFLGHTNVEELMKLGNHPIRRVSV 79 (242)
T ss_dssp STTEEEEES----------SSEEEEEEETTT-EEEECHHHHSCSSCC-C----CCEEEESCSBHHHHHHHCCCCEEEEEE
T ss_pred CCcEEEEcc----------CCCEEEEEEeCC-EEEEcHHhccccccc-cCCCceEEEEEeeccccccccccceeEEEEEE
Confidence 467777753 145999999988 999999999742110 01123455655432 2233444444
Q ss_pred cC----------CCCEEEEEEcCCC----CCCccccCCCCC-CCCCCEEEEEecCCCCC---CceEEEEEEeeecCccCC
Q 013444 207 DF----------HSDIAIVKINSKT----PLPAAKLGTSSK-LCPGDWVVAMGCPHSLQ---NTVTAGIVSCVDRKSSDL 268 (443)
Q Consensus 207 d~----------~~DlAlLkl~~~~----~~~~~~l~~s~~-~~~G~~V~~iG~p~~~~---~~~t~G~Vs~~~~~~~~~ 268 (443)
|+ .+|||||+|+.+. .+.|+.|..... +..|..+++.||..... ..+....+.-+....+..
T Consensus 80 Hp~y~~~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~~~~~~~~~C~~ 159 (242)
T 2qy0_B 80 HPDYRQDESYNFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKIAHDLRFVRLPVANPQACEN 159 (242)
T ss_dssp CTTCCTTCSSCCTTCCEEEEESSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECCCCSSSCCSBCEEEEEEBCCHHHHHH
T ss_pred CCCCccCcCCCCCCcEEEEEECCCCcCCCCcceeecCCCccccCCCCeEEEEeeccCCCcCCccceEEEEEEeCHHHHHH
Confidence 43 2499999998763 345677754332 46789999999976432 233333333332222110
Q ss_pred C------CCCccceEEEEc-----ccCCCCCccceeeecCC-----CEEEEEEEEeecCCCeEEEEeHHHHHHHHHHHHH
Q 013444 269 G------LGGMRREYLQTD-----CAINAGNSGGPLVNIDG-----EIVGINIMKVAAADGLSFAVPIDSAAKIIEQFKK 332 (443)
Q Consensus 269 ~------~~~~~~~~i~~d-----~~i~~G~SGGPlvd~~G-----~VVGI~s~~~~~~~g~~~aIPi~~i~~~l~~l~~ 332 (443)
. ........++.. ...|.|+|||||+-.++ .++||++++..-..+.+.+.-+....++|++..+
T Consensus 160 ~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPl~~~~~~~~~~~l~Gi~S~g~~C~~~~~vyt~V~~y~~WI~~~~~ 239 (242)
T 2qy0_B 160 WLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCSRGYGFYTKVLNYVDWIKKEME 239 (242)
T ss_dssp HHHHTTCCCCCCTTEEEESCTTCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSSSCEEEEEGGGGHHHHHHHTT
T ss_pred HhccccccccCCCCEEeccCCCCCCccccCCCCCcEEEEECCCCeEEEEEEEEECCCcCCCCcEEEEHHHHHHHHHHHhh
Confidence 0 001123355542 35799999999995332 4899999975322234566777777888876543
No 108
>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB: 1ybw_A 2r0k_A
Probab=99.34 E-value=5.1e-11 Score=115.26 Aligned_cols=184 Identities=17% Similarity=0.207 Sum_probs=114.9
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEE
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVL 204 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d---------g~~~~a~vv 204 (443)
-.|.+|.|... ...|+|.+|+++ ||||+|||+.+... ...+.|.+.. .+.+..+-+
T Consensus 46 ~~Pw~v~l~~~---------~~~CgGsLIs~~-~VLTAAHC~~~~~~-----~~~~~V~~G~~~~~~~~~~~~~~~v~~i 110 (283)
T 1yc0_A 46 SHPWLAAIYIG---------DSFCAGSLVHTC-WVVSAAHCFSHSPP-----RDSVSVVLGQHFFNRTTDVTQTFGIEKY 110 (283)
T ss_dssp SSTTEEEEEET---------TEEEEEEEEETT-EEEECGGGGTTCCC-----GGGEEEEESCCBTTCCCSSCEEECEEEE
T ss_pred CCCeEEEEEcC---------CcEEEEEEeeCC-EEEECHHHcCCCCC-----CceEEEEEeeeecccCCCceEEEeeEEE
Confidence 35888888642 256999999988 99999999975311 1356666542 234444444
Q ss_pred eecC--------CCCEEEEEEcCC--------CCCCccccCCC-CCCCCCCEEEEEecCCCC------CCceEEEEEEee
Q 013444 205 NADF--------HSDIAIVKINSK--------TPLPAAKLGTS-SKLCPGDWVVAMGCPHSL------QNTVTAGIVSCV 261 (443)
Q Consensus 205 ~~d~--------~~DlAlLkl~~~--------~~~~~~~l~~s-~~~~~G~~V~~iG~p~~~------~~~~t~G~Vs~~ 261 (443)
..|+ .+|||||+++.+ ..+.++.|... ..+..|+.++++||.... ...+....+.-+
T Consensus 111 ~~hp~y~~~~~~~~DIALl~L~~~~~~~v~~~~~v~picLp~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~L~~~~v~i~ 190 (283)
T 1yc0_A 111 IPYTLYSVFNPSDHDLVLIRLKKKGDRCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENVSGYSSSLREALVPLV 190 (283)
T ss_dssp EECTTCCTTSTTTTCCEEEEECCBTTBSSCCBTTBCCCBCCCTTCCCCTTCEEEEEESSCSBTTBCSCCSBCEEEEEEBC
T ss_pred EecCccccCCCCCCceEEEEeCCCccccccccCceeeeECCCCcCCCCCCCEEEEEEeCccCCCCCccCchheEeEEEEE
Confidence 4443 469999999865 23456667543 345689999999997532 233444444444
Q ss_pred ecCccCCC--CC-CccceEEEEc-----ccCCCCCccceeeec-CC--CEEEEEEEEeecC--CCeEEEEeHHHHHHHHH
Q 013444 262 DRKSSDLG--LG-GMRREYLQTD-----CAINAGNSGGPLVNI-DG--EIVGINIMKVAAA--DGLSFAVPIDSAAKIIE 328 (443)
Q Consensus 262 ~~~~~~~~--~~-~~~~~~i~~d-----~~i~~G~SGGPlvd~-~G--~VVGI~s~~~~~~--~g~~~aIPi~~i~~~l~ 328 (443)
....+... +. ......+... ...|.|+|||||+-. +| .++||++++..-. ..-+.+.-+....++|+
T Consensus 191 ~~~~C~~~~~~~~~~~~~~iCa~~~~~~~~~C~GDSGgPL~~~~~g~~~l~GIvS~g~~C~~~~~p~vyt~V~~y~~WI~ 270 (283)
T 1yc0_A 191 ADHKCSSPEVYGADISPNMLCAGYFDCKSDACQGDSGGPLACEKNGVAYLYGIISWGDGCGRLHKPGVYTRVANYVDWIN 270 (283)
T ss_dssp CHHHHTSTTTTGGGCCTTEEEESCSSSCCBCCTTCTTCEEEEEETTEEEEEEEEEECSTTTCTTCCEEEEEGGGGHHHHH
T ss_pred CHHHhcCccccCCcCCCCEEeeCCCCCCCccCCCCCCCceEEEECCcEEEEEEEEECCCCCCCCCCeEEEEhhhHHHHHH
Confidence 33333211 11 1123455543 357999999999954 45 5999999975311 22455677777778887
Q ss_pred HHHH
Q 013444 329 QFKK 332 (443)
Q Consensus 329 ~l~~ 332 (443)
+..+
T Consensus 271 ~~i~ 274 (283)
T 1yc0_A 271 DRIR 274 (283)
T ss_dssp HHCC
T ss_pred HHhc
Confidence 6543
No 109
>4f4o_C Haptoglobin; globin fold, serine protease fold, complement control protei haemoglobin scavenging, oxygen storage-transport complex; HET: HEM NAG FUC; 2.90A {Sus scrofa}
Probab=99.34 E-value=2.3e-11 Score=121.37 Aligned_cols=190 Identities=12% Similarity=0.094 Sum_probs=118.3
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCC---CCCceEEEEeCCCcEEEEEEEeecCC-
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRA---LPKGKVDVTLQDGRTFEGTVLNADFH- 209 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~---~~~~~i~V~~~dg~~~~a~vv~~d~~- 209 (443)
-.|-.|.|.... ...|.|.+|+++ ||||||||+........ .......+.....+.+..+-+..|+.
T Consensus 113 ~~Pw~v~l~~~~--------~~~CGGsLIs~~-~VLTAAHCv~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~HP~y 183 (347)
T 4f4o_C 113 SFPWQAKMISHH--------NLTSGATLINEQ-WLLTTAKNLRLGHKNDTKAKDIAPTLRLYVGKKQEVEIEKVIFHPDN 183 (347)
T ss_dssp CCTTCEEEECTT--------CCEEECCBCSSS-EEEECHHHHTTTSCTTCCHHHHGGGCEEEETTTEEECEEEEEECSCT
T ss_pred CCCcEEEEEeCC--------CEEEEEEEEcCC-EEEeCcccccCCCCCcceEEeeeeeeeecCCCeEEEEEEEEEECcCC
Confidence 356778886422 256999999987 99999999964321110 00122344455556676776777764
Q ss_pred --CCEEEEEEcCC----CCCCccccCCCCCCCCCCEEEEEecCCCCC----CceEEEEEEeeecCccC------------
Q 013444 210 --SDIAIVKINSK----TPLPAAKLGTSSKLCPGDWVVAMGCPHSLQ----NTVTAGIVSCVDRKSSD------------ 267 (443)
Q Consensus 210 --~DlAlLkl~~~----~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~----~~~t~G~Vs~~~~~~~~------------ 267 (443)
+|||||+|+.+ ..+.|+.|.....+..|..+++.||..... ..+....+.-+....+.
T Consensus 184 ~~nDIALlkL~~~v~~~~~v~PicLp~~~~~~~g~~~~v~GWG~~~~~~~s~~L~~~~v~iv~~~~C~~~~~~~~~~~~~ 263 (347)
T 4f4o_C 184 STVDIGLIKLKQKVPVNERVMPICLPSKDYVNVGLVGYVSGWGRNANLNFTEHLKYVMLPVADQEKCVQYYEGSTVPEKK 263 (347)
T ss_dssp TTCCCEEEEESSCCCCSSSCCCCBCCSSCCCCTTCEEEEEECSBCTTSSBCSSCEEEEEEEECHHHHHHHHSSCSSGGGC
T ss_pred CCCCEEEEEECCCccCCCceeeeecCccccCCCCcEEEEeccccCCCCCCCccceEEEEEEeCHHHHHHHhccccccccc
Confidence 69999999875 345678887666778899999999976422 22333333333222110
Q ss_pred -----CCCC-CccceEEEE-----cccCCCCCccceeee--c-CCC--EEEEEEEEeecC-CCeEEEEeHHHHHHHHHHH
Q 013444 268 -----LGLG-GMRREYLQT-----DCAINAGNSGGPLVN--I-DGE--IVGINIMKVAAA-DGLSFAVPIDSAAKIIEQF 330 (443)
Q Consensus 268 -----~~~~-~~~~~~i~~-----d~~i~~G~SGGPlvd--~-~G~--VVGI~s~~~~~~-~g~~~aIPi~~i~~~l~~l 330 (443)
.... .....+|.. ....|.|||||||+- . +|+ ++||++++..=. ...+.+.-+...+++|++.
T Consensus 264 ~~~~~~~~~~~~~~~~iCAG~~~~~~d~C~GDSGGPLv~~~~~~~~~~lvGIvS~G~~C~~~~pgVYTrVs~y~~WI~~~ 343 (347)
T 4f4o_C 264 TPKSPVGVQPILNEHTFCAGLSKYQEDTCYGDAGSAFAVHDKDDDTWYAAGILSFDKSCRTAEYGVYVRVTSILDWIQTT 343 (347)
T ss_dssp CCCCSSSSCCCCSTTEEEECCCTTCCCCCTTCTTCEEEEEETTTTEEEEEEEEEECCCTTTSSCEEEEEHHHHHHHHHHH
T ss_pred cccccccccccccCCeEEecCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEEEeCCCCCCCCCeEEEEHHHHHHHHHHH
Confidence 0000 011234544 235789999999972 2 343 899999975311 2245567788888888876
Q ss_pred HH
Q 013444 331 KK 332 (443)
Q Consensus 331 ~~ 332 (443)
.+
T Consensus 344 i~ 345 (347)
T 4f4o_C 344 IA 345 (347)
T ss_dssp HT
T ss_pred HH
Confidence 64
No 110
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=99.32 E-value=9.8e-13 Score=114.12 Aligned_cols=100 Identities=17% Similarity=0.226 Sum_probs=72.9
Q ss_pred HcCceeeeecCceeec---ccHHHHHHhhcCCCCCCCCCCceEEeEECCCCccccCCCCCCCEEEEECCEeeC--CHHHH
Q 013444 332 KNGRVVRPWLGLKMLD---LNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQ--SITEI 406 (443)
Q Consensus 332 ~~g~v~rp~lGi~~~~---~~~~~~~~l~~~~~~~~~~~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~--s~~dl 406 (443)
+.+++.++||||.+.. .+... +.+. ......|++|.+|.++|||+++||++||+|++|||++|. ++.++
T Consensus 31 ~~~~~~~~~lG~~i~~g~~~~~~~-~~~~-----~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~ 104 (139)
T 2vz5_A 31 KLRQGENLILGFSIGGGIDQDPSQ-NPFS-----EDKTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQA 104 (139)
T ss_dssp CEEETTEEECSEEEEECTTSCGGG-CSSC-----SSTTCCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHH
T ss_pred EcCCCCcccccEEEEccccCChhh-hhhc-----ccCCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEEcCCCCHHHH
Confidence 4556678999999754 22211 1111 012357999999999999999999999999999999999 68999
Q ss_pred HHHHhcCCCCeEEEEEEECCCeEEEEEEEecC
Q 013444 407 IEIMGDRVGEPLKVVVQRANDQLVTLTVIPEE 438 (443)
Q Consensus 407 ~~~l~~~~g~~v~l~v~R~~g~~~~l~v~~~~ 438 (443)
.+++....|+++.|+|.| +++..++.+....
T Consensus 105 ~~~l~~~~g~~v~l~v~R-~g~~~~v~~~~~~ 135 (139)
T 2vz5_A 105 RKRLTKRSEEVVRLLVTR-QSLQKAVQQSMLS 135 (139)
T ss_dssp HHHHCCTTCSEEEEEEEE-CC-------CCCC
T ss_pred HHHHHhCCCCEEEEEEEE-CCEEEEEEEeece
Confidence 999988788999999999 7877777766654
No 111
>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C
Probab=99.32 E-value=1.1e-11 Score=116.78 Aligned_cols=187 Identities=17% Similarity=0.201 Sum_probs=110.2
Q ss_pred HhCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC--CcE---------EEE
Q 013444 133 RVCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD--GRT---------FEG 201 (443)
Q Consensus 133 ~~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d--g~~---------~~a 201 (443)
.-.|.+|.|...... .....|+|.+|+++ +|||+|||+.+. ..+.|.+.. -.. +..
T Consensus 8 ~~~Pw~v~l~~~~~~----~~~~~CgGtLIs~~-~VLTAAhC~~~~--------~~~~v~~G~~~~~~~~~~~~~~~~~v 74 (240)
T 1fon_A 8 YSWSWQVSLQYEKDG----AFHHTCGGSLIAPD-WVVTAGHCISTS--------RTYQVVLGEYDRSVLEGSEQVIPINA 74 (240)
T ss_dssp -CEEEEEEEEEEETT----EEEEEECCEEEETT-EEEECGGGCCTT--------SCEEEEEEEEETTEEEEEEEEEEECT
T ss_pred CCcccEEEEEEecCC----cEeeEEEEEEeeCC-EEEECHHHCCCC--------CceEEEeeeeeccccCCCceeEeeee
Confidence 345778888753211 01256999999988 999999999763 234454431 111 111
Q ss_pred EEEeecC-------C--CCEEEEEEcCCC----CCCccccCCCC-CCCCCCEEEEEecCCCCC-----CceEEEEEEeee
Q 013444 202 TVLNADF-------H--SDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPHSLQ-----NTVTAGIVSCVD 262 (443)
Q Consensus 202 ~vv~~d~-------~--~DlAlLkl~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~~-----~~~t~G~Vs~~~ 262 (443)
+-+..|+ . +|||||+|+.+. .+.++.|.... .+..|+.++++||..... ..+....+..+.
T Consensus 75 ~~i~~Hp~y~~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~ 154 (240)
T 1fon_A 75 GDLFVHPLWNSNCVACGNDIALVKLSRSAQLGDKVQLANLPPAGDILPNEAPCYISGWGRLYTGGPLPDKLQQALLPTVD 154 (240)
T ss_dssp TSEEECTTCCTTCGGGCCCCEEEECSSCCCCTTSCCCCBCCCTTCCCCTTCCCEEEECTTCCCSSSCCSBCEEEECCEEC
T ss_pred eEEEECCCCcCCCccCCCCEEEEEecCccccCCcccccCCCCcccCCCCCCeEEEEEEeEcCCCCCCChhheEEEEeeeC
Confidence 1123333 2 799999998763 35677775433 456789999999975421 233333333332
Q ss_pred cCccCCC--CC-CccceEEEEc---ccCCCCCccceeeec--CC--CEEEEEEEEee-c---CCCeEEEEeHHHHHHHHH
Q 013444 263 RKSSDLG--LG-GMRREYLQTD---CAINAGNSGGPLVNI--DG--EIVGINIMKVA-A---ADGLSFAVPIDSAAKIIE 328 (443)
Q Consensus 263 ~~~~~~~--~~-~~~~~~i~~d---~~i~~G~SGGPlvd~--~G--~VVGI~s~~~~-~---~~g~~~aIPi~~i~~~l~ 328 (443)
...+... ++ ......+... ...|.|+|||||+-. +| .++||++++.. . ...-+.+.-+....++|+
T Consensus 155 ~~~C~~~~~~~~~~~~~~~Ca~~~~~~~C~GDsGgPL~~~~~~~~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~ 234 (240)
T 1fon_A 155 YEHCSQWDWWGITVKKTMVCAGGDTRSGCNGDSGGPLNCPAADGSWQVHGVTSFVSAFGCNTIKKPTVFTRVSAFIDWID 234 (240)
T ss_dssp HHHHTSTTTTGGGCCTTEEEECCSSSCSTTSCTTCEEEEECSSSCEEEEEEEEECCTTCSSBTTBCEEEEEGGGSHHHHH
T ss_pred HHHhccceecCCccccceEeecCCCCcccCCCCCCeEEeEcCCCCEEEEEEEEEcCCCCCCCCCCCcEEEEhHHHHHHHH
Confidence 2222111 11 1122345443 457999999999843 56 79999998752 1 122355677777777777
Q ss_pred HHHH
Q 013444 329 QFKK 332 (443)
Q Consensus 329 ~l~~ 332 (443)
+..+
T Consensus 235 ~~~~ 238 (240)
T 1fon_A 235 ETIA 238 (240)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6543
No 112
>3cp7_A Alkaline serine protease Al20; trypsin-like, hydrolase; 1.39A {Nesterenkonia abyssinica}
Probab=99.32 E-value=2.7e-11 Score=112.93 Aligned_cols=179 Identities=20% Similarity=0.260 Sum_probs=100.4
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEe---CCCEEEeccccccCCCCCCCCCCceEEEEeC--CC----cEEEEEEE
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVD---ADGTILTCAHVVVDFHGSRALPKGKVDVTLQ--DG----RTFEGTVL 204 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~---~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~--dg----~~~~a~vv 204 (443)
..|.+++|....+ .+...|+|.+|+ ++ +|||||||+.+..... ....+.+... +. ..+.++-+
T Consensus 5 ~~p~~g~l~~~~~-----~~~~~CgGslI~s~s~~-~VLTAAHC~~~~~~~~--~~~~~~v~~G~~~~~~~~~~~~v~~~ 76 (218)
T 3cp7_A 5 DSPHIGKVFFSTN-----QGDFVCSANIVASANQS-TVATAGHCLHDGNGGQ--FARNFVFAPAYDYGESEHGVWAAEEL 76 (218)
T ss_dssp TCTTEEEEEEEET-----TEEEEEEEEEBCCTTSC-EEEECGGGTBCCTTCB--BCEEEEEEETCSSSCCTTCCEEEEEE
T ss_pred CCceEEEEEEEcC-----CCCeEEEEEEEecCCCC-EEEEChHhcCcCCCCe--eecCEEEECcccCCCCCccEEEEEEE
Confidence 3578888876421 123679999998 77 9999999996521000 0123444432 11 13444444
Q ss_pred eec--------CCCCEEEEEEcCC--CC----CC-ccccCCCCCCCCCCEEEEEecCCCCC---CceEEEEEEeeecCcc
Q 013444 205 NAD--------FHSDIAIVKINSK--TP----LP-AAKLGTSSKLCPGDWVVAMGCPHSLQ---NTVTAGIVSCVDRKSS 266 (443)
Q Consensus 205 ~~d--------~~~DlAlLkl~~~--~~----~~-~~~l~~s~~~~~G~~V~~iG~p~~~~---~~~t~G~Vs~~~~~~~ 266 (443)
..| ..+|||||+|+.+ .. +. ++.|... ...|+.+.+.||+.... .... .+......
T Consensus 77 ~~hp~y~~~~~~~~DiAll~L~~~~~~~~~~~v~~~~~l~~~--~~~g~~~~v~GwG~~~~~~~~~l~----~C~~~~~~ 150 (218)
T 3cp7_A 77 VTSAEWANRGDFEHDYAFAVLETKGGTTVQQQVGTASPIAFN--QPRGQYYSAYGYPAAAPFNGQELH----SCHGTATN 150 (218)
T ss_dssp EECHHHHHHCCGGGCCEEEEECCBTTBCHHHHHSCCBCBCCS--CCSSCEEEEEECCCSTTCCSSSCE----EEEEECEE
T ss_pred EECcccccCCCCcCCEEEEEEeCCCCcChhHhcCcccceeec--CCCCCEEEEEeCCCCCCCCCceee----EeeeeEEc
Confidence 333 2469999999875 21 22 4555432 24789999999997431 1111 11110000
Q ss_pred CCCCCCccceEEEEcccCCCCCccceeeec---CCCEEEEEEEEeecCCCeEEEEe-HHHHHHHHHHH
Q 013444 267 DLGLGGMRREYLQTDCAINAGNSGGPLVNI---DGEIVGINIMKVAAADGLSFAVP-IDSAAKIIEQF 330 (443)
Q Consensus 267 ~~~~~~~~~~~i~~d~~i~~G~SGGPlvd~---~G~VVGI~s~~~~~~~g~~~aIP-i~~i~~~l~~l 330 (443)
. ... ...+...|..+.|+|||||+.. .++++||++++..-.....+... -+.++.+++..
T Consensus 151 ~-~~~---~~~~~~~Ca~~~GDSGGPlv~~~~g~~~lvGIvS~G~gc~~~~~~~p~~~~~~~~l~~~a 214 (218)
T 3cp7_A 151 D-PMG---SSTQGIPCNMTGGSSGGPWFLGNGTGGAQNSTNSYGYTFLPNVMFGPYFGSGAQQNYNYA 214 (218)
T ss_dssp C-TTS---SSCEEEECCCCTTCTTCEEEESSSSSSCEEEECCEEETTEEEEEEECCCCHHHHHHHHHH
T ss_pred C-CCC---CceEEecCCCCCCCcCCeeEEccCCCeEEEEEEccccCCCCCcEEcCcCCHHHHHHHHHH
Confidence 0 000 1112233456789999999954 27899999998643323333322 24566666654
No 113
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=99.31 E-value=1.4e-11 Score=100.50 Aligned_cols=72 Identities=22% Similarity=0.343 Sum_probs=64.9
Q ss_pred CCceEEeEECCCCccccCCCCCCCEEEEECCEeeCCHHHHHHHHhc-CCCCeEEEEEEECCCeEEEEEEEecCCC
Q 013444 367 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEIIEIMGD-RVGEPLKVVVQRANDQLVTLTVIPEEAN 440 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s~~dl~~~l~~-~~g~~v~l~v~R~~g~~~~l~v~~~~~~ 440 (443)
..|++|.+|.++|||++ ||++||+|++|||++|.+|+++..++.. ..|+++.|+|.| +|+..++++++.+.+
T Consensus 6 ~~Gv~V~~V~~~spA~~-GL~~GD~I~~Ing~~v~~~~dl~~~l~~~~~g~~v~l~v~R-~g~~~~~~v~~~~~~ 78 (100)
T 3i18_A 6 YDGVYVMSVKDDVPAAD-VLHAGDLITEIDGNAFKSSQEFIDYIHSKKVGDTVKINYKH-GDKNEQADIKLTAID 78 (100)
T ss_dssp CCCEEEEEECTTSGGGG-TCCTTCEEEEETTBCCSSHHHHHHHHHTSCTTCEEEEEEEE-TTEEEEEEEECEECS
T ss_pred CCCEEEEEeCCCCchHH-CCCCCCEEEEECCEECCCHHHHHHHHHhCCCCCEEEEEEEE-CCEEEEEEEEEecCC
Confidence 47999999999999996 9999999999999999999999999886 578999999999 888888888876543
No 114
>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2 PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H 1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H* 1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H* ...
Probab=99.31 E-value=4.7e-11 Score=113.46 Aligned_cols=185 Identities=14% Similarity=0.166 Sum_probs=114.4
Q ss_pred CCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEEe
Q 013444 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVLN 205 (443)
Q Consensus 135 ~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d---------g~~~~a~vv~ 205 (443)
.|.+|.|... +...|+|.+|+++ ||||+|||+.+... ...+.|.+.. .+.+..+-+.
T Consensus 12 ~Pw~v~l~~~--------~~~~CgGtLIs~~-~VLTAAHC~~~~~~-----~~~~~v~~G~~~~~~~~~~~~~~~v~~i~ 77 (254)
T 2bz6_H 12 CPWQVLLLVN--------GAQLCGGTLINTI-WVVSAAHCFDKIKN-----WRNLIAVLGEHDLSEHDGDEQSRRVAQVI 77 (254)
T ss_dssp STTEEEEEET--------TEEEEEEEECSSS-EEEECGGGGTTCSC-----GGGEEEEESCCBTTCCCSCCEEEEEEEEE
T ss_pred cCCEEEEEeC--------CCcEEEEEEecCC-EEEECHHHcCCCCC-----cceEEEEECCcccCCCCCCcEEEEEEEEE
Confidence 5788888731 1256999999987 99999999976321 1346666542 2445555555
Q ss_pred ecC-------CCCEEEEEEcCCC----CCCccccCCCC----CCCCCCEEEEEecCCCCC-----CceEEEEEEeeecCc
Q 013444 206 ADF-------HSDIAIVKINSKT----PLPAAKLGTSS----KLCPGDWVVAMGCPHSLQ-----NTVTAGIVSCVDRKS 265 (443)
Q Consensus 206 ~d~-------~~DlAlLkl~~~~----~~~~~~l~~s~----~~~~G~~V~~iG~p~~~~-----~~~t~G~Vs~~~~~~ 265 (443)
.|+ .+|||||+++.+. .+.|+.|.... .+..++.+++.||..... ..+....+..+....
T Consensus 78 ~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~ 157 (254)
T 2bz6_H 78 IPSTYVPGTTNHDIALLRLHQPVVLTDHVVPLCLPERTFSERTLAFVRFSLVSGWGQLLDRGATALELMVLNVPRLMTQD 157 (254)
T ss_dssp EETTCCTTSCSSCCEEEEESSCCCCBTTBCCCBCCCHHHHHHTGGGCCEEEEEESCBSSTTSCBCSBCEEEEEEEECHHH
T ss_pred ECCCCCCCCCcCcEEEEEECCccccCCCccceECCCCccccccccCCCcEEEEeCcccCCCCCCChhheeeeeeeecHHH
Confidence 554 3699999998763 34566664322 234688999999975322 223333333332222
Q ss_pred cC--CCC----CCccceEEEEc-----ccCCCCCccceeeec-CC--CEEEEEEEEeecC--CCeEEEEeHHHHHHHHHH
Q 013444 266 SD--LGL----GGMRREYLQTD-----CAINAGNSGGPLVNI-DG--EIVGINIMKVAAA--DGLSFAVPIDSAAKIIEQ 329 (443)
Q Consensus 266 ~~--~~~----~~~~~~~i~~d-----~~i~~G~SGGPlvd~-~G--~VVGI~s~~~~~~--~g~~~aIPi~~i~~~l~~ 329 (443)
+. +.. .......++.. ...|.|+|||||+.. +| .++||++++..-. ..-+.+.-+....++|++
T Consensus 158 C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPl~~~~~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~ 237 (254)
T 2bz6_H 158 CLQQSRKVGDSPNITEYMFCAGYSDGSKDSCKGDSGGPHATHYRGTWYLTGIVSWGQGCATVGHFGVYTRVSQYIEWLQK 237 (254)
T ss_dssp HHHHSCCCTTCCCCCTTEEEESCSSSSCBCCGGGTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHH
T ss_pred HhhhhhccccCCccCCCEEeecCCCCCCccccccCCCceEEeECCEEEEEEEEEECCCCCCCCCCeEEEEHHHHHHHHHH
Confidence 11 000 01223355542 357999999999954 45 4999999875311 223556777888888887
Q ss_pred HHHc
Q 013444 330 FKKN 333 (443)
Q Consensus 330 l~~~ 333 (443)
..+.
T Consensus 238 ~~~~ 241 (254)
T 2bz6_H 238 LMRS 241 (254)
T ss_dssp HHTS
T ss_pred HHhc
Confidence 7654
No 115
>1z8g_A Serine protease hepsin; serine protease hepsin, protease, hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A {Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A 1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A*
Probab=99.31 E-value=1.2e-10 Score=117.37 Aligned_cols=187 Identities=19% Similarity=0.206 Sum_probs=115.0
Q ss_pred HhCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC-------CcEEEEEEEe
Q 013444 133 RVCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD-------GRTFEGTVLN 205 (443)
Q Consensus 133 ~~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d-------g~~~~a~vv~ 205 (443)
.-.|.+|.|... +...|.|.+|+++ ||||+|||+..... ....+.|.+.. +..+..+-+.
T Consensus 127 ~~~Pw~v~l~~~--------~~~~CgGsLIs~~-~VLTAAHCv~~~~~----~~~~~~V~~G~~~~~~~~~~~~~V~~i~ 193 (372)
T 1z8g_A 127 GRWPWQVSLRYD--------GAHLCGGSLLSGD-WVLTAAHCFPERNR----VLSRWRVFAGAVAQASPHGLQLGVQAVV 193 (372)
T ss_dssp TSSTTEEEEEET--------TEEEEEEEESSSS-EEEECGGGCCGGGC----CGGGEEEEESCSBTTCTTSEEECEEEEE
T ss_pred CCCCcEEEEEeC--------CceEEEEEEecCC-EEEEChhhcCCCCC----ccceEEEEEeeEeccCCCCcEEEEEEEE
Confidence 346788888742 1256999999988 99999999943110 12345565532 2345555555
Q ss_pred ecCC-------------CCEEEEEEcCCC----CCCccccCCC-CCCCCCCEEEEEecCCCCC-----CceEEEEEEeee
Q 013444 206 ADFH-------------SDIAIVKINSKT----PLPAAKLGTS-SKLCPGDWVVAMGCPHSLQ-----NTVTAGIVSCVD 262 (443)
Q Consensus 206 ~d~~-------------~DlAlLkl~~~~----~~~~~~l~~s-~~~~~G~~V~~iG~p~~~~-----~~~t~G~Vs~~~ 262 (443)
.|+. +|||||+|+.+. .+.|+.|... ..+..|+.++++||..... ..+....+..+.
T Consensus 194 ~Hp~y~~~~~~~~~~~~nDIALlkL~~pv~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~~~~~~~L~~~~v~ii~ 273 (372)
T 1z8g_A 194 YHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIIS 273 (372)
T ss_dssp EETTCGGGTCTTCCCCTTCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSSTTSCBCSBCEEEEEEEEC
T ss_pred ECCCccccccCCCCCCCccEEEEEECCCCCCCCceeccccCCcccCCCCCCEEEEEecCCCCCCCCCCceeeEEEEEecC
Confidence 5543 499999998762 3567777543 3456799999999975321 233444444333
Q ss_pred cCccCC--CCC-CccceEEEEc-----ccCCCCCccceeeecC-----C--CEEEEEEEEeec--CCCeEEEEeHHHHHH
Q 013444 263 RKSSDL--GLG-GMRREYLQTD-----CAINAGNSGGPLVNID-----G--EIVGINIMKVAA--ADGLSFAVPIDSAAK 325 (443)
Q Consensus 263 ~~~~~~--~~~-~~~~~~i~~d-----~~i~~G~SGGPlvd~~-----G--~VVGI~s~~~~~--~~g~~~aIPi~~i~~ 325 (443)
...+.. .+. .....+|... ...|.|+|||||+-.+ | .++||++++..= ...-+.+.-+....+
T Consensus 274 ~~~C~~~~~~~~~i~~~~iCag~~~~~~d~C~GDSGGPLv~~~~~~~~~~~~lvGIvS~G~~C~~~~~p~vyt~V~~y~~ 353 (372)
T 1z8g_A 274 NDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFRE 353 (372)
T ss_dssp HHHHTSTTTTTTCCCTTEEEESCTTCSCBCCTTCTTCEEEEEECTTSSCEEEEEEEEEEBSSSSCTTCCEEEEEGGGGHH
T ss_pred hHHhCcchhcCCcCCCCeEeeecCCCCCcCCCCCCccceEeccCcCCCCCEEEEEEEEeCCCCCCCCCCeEEEEHHHHHH
Confidence 332221 011 1223455543 3579999999999443 3 599999997531 122355677777778
Q ss_pred HHHHHHH
Q 013444 326 IIEQFKK 332 (443)
Q Consensus 326 ~l~~l~~ 332 (443)
+|++..+
T Consensus 354 WI~~~i~ 360 (372)
T 1z8g_A 354 WIFQAIK 360 (372)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 8776654
No 116
>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate immunity, melanin, immune system binding complex; HET: NAG FUC; 2.00A {Holotrichia diomphalia}
Probab=99.30 E-value=3.2e-11 Score=122.40 Aligned_cols=197 Identities=15% Similarity=0.172 Sum_probs=117.5
Q ss_pred HHhCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC-----------CcEEE
Q 013444 132 ARVCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD-----------GRTFE 200 (443)
Q Consensus 132 ~~~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d-----------g~~~~ 200 (443)
..-.|.+|.|.......+.......|.|.+|+++ ||||+|||+.+... ....+.|++.. .+.+.
T Consensus 139 ~~e~PW~v~l~~~~~~~~~~~~~~~CGGsLIs~~-~VLTAAHCv~~~~~----~~~~~~V~~G~~~~~~~~~~~~~~~~~ 213 (394)
T 2b9l_A 139 YGEFPWMVAVLKANVIPGSGEEQLVCGGSLIAPS-VVLTGAHCVNSYQS----NLDAIKIRAGEWDTLTEKERLPYQERK 213 (394)
T ss_dssp TTSSTTEEEEEECC------CCSEEEEEEEEETT-EEEECHHHHGGGTT----CGGGEEEEESCCBTTCCCSSSCCEEEE
T ss_pred CCCCCcEEEEeeccccccccccceEeeEEEEeCC-EEEeccceecCCCC----CcccEEEEeceeeccCCcCCCccEEEE
Confidence 3456889998754321111122367999999988 99999999975321 01356666542 13445
Q ss_pred EEEEeecCC-------CCEEEEEEcCC----CCCCccccCCCCCCCCCCEEEEEecCCCC-------CCceEEEEEEeee
Q 013444 201 GTVLNADFH-------SDIAIVKINSK----TPLPAAKLGTSSKLCPGDWVVAMGCPHSL-------QNTVTAGIVSCVD 262 (443)
Q Consensus 201 a~vv~~d~~-------~DlAlLkl~~~----~~~~~~~l~~s~~~~~G~~V~~iG~p~~~-------~~~~t~G~Vs~~~ 262 (443)
.+-+..|+. +|||||+|+.+ ..+.++.|........+..+++.||.... ...+....+..+.
T Consensus 214 V~~ii~Hp~y~~~~~~nDIALL~L~~pv~~~~~v~PicLp~~~~~~~~~~~~v~GWG~t~~~~~~~~s~~L~~~~v~iv~ 293 (394)
T 2b9l_A 214 IRQVIIHSNFNPKTVVNDVALLLLDRPLVQADNIGTICLPQQSQIFDSTECFASGWGKKEFGSRHRYSNILKKIQLPTVD 293 (394)
T ss_dssp EEEEEECTTCCTTTCTTCCEEEEESSCCBCCTTCCCCBCCCTTCCCCCSCEEEEECCTTTTTCTTSSCCBCEEEEECEEC
T ss_pred EEEEEECCCCCCCccccceEEEEecCccccCCceeeeEcCCcccCccCCEEEEEeccCccCCCCCcccccceEEEEEEEC
Confidence 555555553 59999999876 34567777654444567889999997532 1233333333333
Q ss_pred cCccCC-------CCC-CccceEEEEc----ccCCCCCccceeeec----CC--CEEEEEEEEeec--CCCeEEEEeHHH
Q 013444 263 RKSSDL-------GLG-GMRREYLQTD----CAINAGNSGGPLVNI----DG--EIVGINIMKVAA--ADGLSFAVPIDS 322 (443)
Q Consensus 263 ~~~~~~-------~~~-~~~~~~i~~d----~~i~~G~SGGPlvd~----~G--~VVGI~s~~~~~--~~g~~~aIPi~~ 322 (443)
...+.. +.. .....+|... ...|.|+|||||+-. +| .++||++++..= ...-+.+.-+..
T Consensus 294 ~~~C~~~~~~~~~~~~~~i~~~~iCAg~~~g~d~C~GDSGGPLv~~~~~~~~~~~lvGIvS~G~~C~~~~~PgVYT~V~~ 373 (394)
T 2b9l_A 294 RDKCQADLRNTRLGLKFVLDQTFVCAGGEQGKDTCTGDGGSPLFCPDPRNPSRYMQMGIVAWGIGCGDENVPGVYANVAH 373 (394)
T ss_dssp HHHHHHHHHTTTTCTTCCCCTTEEEECCBSSCSCCSSCTTCEEEEEETTEEEEEEEEEEESCTTCCCBSSSCEEEEEGGG
T ss_pred HHHHHHHHhhcccccceecCCCEEEeeCCCCCcCCCCCcchhhEEEEcCCCCeEEEEEEEEECCCCCCCCCCeEEEEHHH
Confidence 222110 000 1122345442 467999999999943 23 589999987531 112355566777
Q ss_pred HHHHHHHHHHc
Q 013444 323 AAKIIEQFKKN 333 (443)
Q Consensus 323 i~~~l~~l~~~ 333 (443)
.+++|++..+.
T Consensus 374 y~~WI~~~i~~ 384 (394)
T 2b9l_A 374 FRNWIDQEMQA 384 (394)
T ss_dssp GHHHHHHHHHH
T ss_pred hHHHHHHHHHh
Confidence 88888776543
No 117
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=99.29 E-value=4e-11 Score=116.12 Aligned_cols=187 Identities=14% Similarity=0.147 Sum_probs=113.1
Q ss_pred HHHhCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeC------CCcEEEEEEE
Q 013444 131 AARVCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQ------DGRTFEGTVL 204 (443)
Q Consensus 131 ~~~~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~------dg~~~~a~vv 204 (443)
...-.|.+|.|.... +...|+|.+|+++ ||||+|||+.+. ..+.|.+. ..+.+..+-+
T Consensus 60 ~~~~~Pw~v~l~~~~-------~~~~CgGtLI~~~-~VLTAAHC~~~~--------~~~~V~~G~~~~~~~~~~~~v~~i 123 (283)
T 3f1s_B 60 DLQDLPWQVKLTNSE-------GKDFCGGVIIREN-FVLTTAKCSLLH--------RNITVKTYFNRTSQDPLMIKITHV 123 (283)
T ss_dssp ---CCTTEEEEECTT-------SCEEEEEEEEETT-EEEECHHHHTSC--------SSCEEEECTTC-CCCCEEEEEEEE
T ss_pred cccccCCEEEEEecC-------CCeeeccEEecCC-EEEEcHHhcCcc--------CceEEEEeeeeCCCCcEEEEeEEE
Confidence 345689999997432 2357999999988 999999999653 24555554 2355666666
Q ss_pred eecC-------CCCEEEEEEcCCC----CCCccccCCCC----CCCCCCEEEEEecCCCCC---CceEEEEEEeeecCcc
Q 013444 205 NADF-------HSDIAIVKINSKT----PLPAAKLGTSS----KLCPGDWVVAMGCPHSLQ---NTVTAGIVSCVDRKSS 266 (443)
Q Consensus 205 ~~d~-------~~DlAlLkl~~~~----~~~~~~l~~s~----~~~~G~~V~~iG~p~~~~---~~~t~G~Vs~~~~~~~ 266 (443)
..|+ .+|||||+|+.+. .+.|+.|.... .+..|+.+++.||..... ..+....+..+....+
T Consensus 124 ~~Hp~y~~~~~~nDIALl~L~~pv~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~v~~~~~~~C 203 (283)
T 3f1s_B 124 HVHMRYDADAGENDLSLLELEWPIQCPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWARNGTDLGNSLTTRPVTLVEGEEC 203 (283)
T ss_dssp EECTTCBTTTTBTCCEEEEESSCCCTTTTCCCCBCCCHHHHHHTTTTTSCEEEEECBCC-------CEEEEEEEECHHHH
T ss_pred EECCCCCCCCCCCCEEEEEeCCcccCCCCEEeEECCCCccccccccCCCEEEEEECCCCCCCCCceeeEEEEeEeCHHHH
Confidence 6665 3599999998753 35577775532 457799999999986211 1222333332222211
Q ss_pred CCCCC-CccceEEEEc--ccCCCCCccceeeec-CCC--EEEEEEEEeecCC-CeEEEEeHHHHHHHHHHHHHc
Q 013444 267 DLGLG-GMRREYLQTD--CAINAGNSGGPLVNI-DGE--IVGINIMKVAAAD-GLSFAVPIDSAAKIIEQFKKN 333 (443)
Q Consensus 267 ~~~~~-~~~~~~i~~d--~~i~~G~SGGPlvd~-~G~--VVGI~s~~~~~~~-g~~~aIPi~~i~~~l~~l~~~ 333 (443)
...+. .....+|... ...+.|+|||||+-. +|+ ++||++++..... .-+.+.-+....++|++..+.
T Consensus 204 ~~~~~~~~~~~~~Ca~~~~~~~~gDSGgPlv~~~~~~~~l~GIvS~g~c~~~~~p~vyt~V~~y~~WI~~~~~~ 277 (283)
T 3f1s_B 204 GQVLNVTVTTRTYCERSSVAAMHWMDGSVVTREHRGSWFLTGVLGSQPVGGQAHMVLVTKVSRYSLWFKQIMNA 277 (283)
T ss_dssp HHHHTSCCCTTEEEEECSSCGGGBCTTCEEEEECSSCEEEEEEECCCSGGGCSSEEEEEEGGGGHHHHHHHHTC
T ss_pred hhhhcCCCCCCeEcccCCCCCCCCCCCCcEEEEECCEEEEEEEEEeCCCCCCCcceEEEEhHHhHHHHHHHhhc
Confidence 10000 1112344332 224468999999954 466 9999987532222 234667777788888776653
No 118
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=99.28 E-value=2.2e-12 Score=103.53 Aligned_cols=70 Identities=21% Similarity=0.368 Sum_probs=64.1
Q ss_pred ceEEeEECCCCccccCCCCCCCEEEEECCEeeCCHHHHHHHHhcC-CCCeEEEEEEECCCeEEEEEEEecCCC
Q 013444 369 GVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEIIEIMGDR-VGEPLKVVVQRANDQLVTLTVIPEEAN 440 (443)
Q Consensus 369 g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s~~dl~~~l~~~-~g~~v~l~v~R~~g~~~~l~v~~~~~~ 440 (443)
|++|..|.++|||++ ||++||+|++|||++|.+++++..++... .|+++.|+|.| +|+.+++++++.+.+
T Consensus 2 Gv~V~~V~~~spA~~-GL~~GD~I~~InG~~v~~~~~l~~~l~~~~~g~~v~l~v~R-~g~~~~~~v~~~~~~ 72 (91)
T 2kjp_A 2 GIYASSVVENMPAKG-KIEVGDKIISADGKNYQSAEKLIDYISSKKAGDKVTLKIER-EEKEKRVTLTLKQFP 72 (91)
T ss_dssp CSSCCCCCCSSCCSS-CCCSSCEEEEETTBCCSSHHHHHHHHSSCCSSCEECEEEES-SSCEECCCEECCCCT
T ss_pred ceEEEEECCCChHHH-cCCCCCEEEEECCEECCCHHHHHHHHHcCCCCCEEEEEEEE-CCEEEEEEEEEeccC
Confidence 788999999999999 99999999999999999999999999875 79999999999 889888888887654
No 119
>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S 3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C*
Probab=99.28 E-value=4.8e-11 Score=112.01 Aligned_cols=180 Identities=18% Similarity=0.157 Sum_probs=108.2
Q ss_pred CCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEEe
Q 013444 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVLN 205 (443)
Q Consensus 135 ~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d---------g~~~~a~vv~ 205 (443)
.|.+|.|.... ...|+|.+|+++ +|||+|||+... ..+.|.+.. .+.+..+-+.
T Consensus 12 ~Pw~v~l~~~~--------~~~CgGtLIs~~-~VLTAAhC~~~~--------~~~~v~~G~~~~~~~~~~~~~~~v~~i~ 74 (235)
T 2wph_S 12 FPWQVVLNGKV--------DAFCGGSIVNEK-WIVTAAHCVETG--------VKITVVAGEHNIEETEHTEQKRNVIRII 74 (235)
T ss_dssp STTEEEEESSS--------TTCEEEEEEETT-EEEECGGGCCTT--------SCCEEEESCCBTTSCCSCCEEEEEEEEE
T ss_pred CCeEEEEccCC--------CeeEEEEEEeCC-EEEECHHHCcCC--------CCEEEEEcccccCCCCCCcEEeeeEEEE
Confidence 57788886421 256999999988 999999999753 234455431 2344555444
Q ss_pred ecC---------CCCEEEEEEcCCC----CCCccccCCCCC---CCCCCEEEEEecCCCCC-----CceEEEEEEeeecC
Q 013444 206 ADF---------HSDIAIVKINSKT----PLPAAKLGTSSK---LCPGDWVVAMGCPHSLQ-----NTVTAGIVSCVDRK 264 (443)
Q Consensus 206 ~d~---------~~DlAlLkl~~~~----~~~~~~l~~s~~---~~~G~~V~~iG~p~~~~-----~~~t~G~Vs~~~~~ 264 (443)
.|+ .+|||||+++.+. .+.|+.|..... +..+..+++.||..... ..+....+.-+...
T Consensus 75 ~Hp~y~~~~~~~~~DIALl~L~~~~~~~~~v~picL~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~ 154 (235)
T 2wph_S 75 PHHNFNAAINTYNHDIALLELDEPLVLNSYVTPICIADKEYTNIFLKFGSGYVSGWGRVFHKGRSALVLQYLRVPLVDRA 154 (235)
T ss_dssp ECTTTTSSSSCCTTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHHHTCEEEEEESSBSSTTSCBCSBCEEEEEEEECHH
T ss_pred eCCCCcccCCcCCCCEEEEEECCcCcCCCCccccCCCCCcccccccCCccEEEEeCCCccCCCCccchheEeeeeeeCHH
Confidence 443 3599999998763 345666643221 23578899999975321 22333333333322
Q ss_pred ccCCCCC-CccceEEEEc-----ccCCCCCccceeeec-CC--CEEEEEEEEeecC--CCeEEEEeHHHHHHHHHHHH
Q 013444 265 SSDLGLG-GMRREYLQTD-----CAINAGNSGGPLVNI-DG--EIVGINIMKVAAA--DGLSFAVPIDSAAKIIEQFK 331 (443)
Q Consensus 265 ~~~~~~~-~~~~~~i~~d-----~~i~~G~SGGPlvd~-~G--~VVGI~s~~~~~~--~g~~~aIPi~~i~~~l~~l~ 331 (443)
.+...+. ......+... ...|.|+|||||+.. +| .++||++++..-. ...+.+.-+...+++|++..
T Consensus 155 ~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~ 232 (235)
T 2wph_S 155 TCLRSTKFTITNNMFCAGFHEGGRDSCQGDSGGPHVTEVEGTSFLTGIISWGEECAMKGKYGIYTKVSRYVNWIKEKT 232 (235)
T ss_dssp HHHHTCSSCCCTTEEEESCTTCSCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHC
T ss_pred HhcCcccCCCCCCEEEeCCCCCCCccCCCCCCCceEEeECCeEEEEEEEEECCCCCCCCCCeEEEEHHHhHHHHHHHH
Confidence 2211111 1123445542 357999999999953 45 4899999875311 22355677777777776643
No 120
>1zyo_A Serine protease; beta-barrel, glutamyl endopeptidase, hydrolase; 2.40A {Sesbania mosaic virus}
Probab=99.27 E-value=1.6e-10 Score=105.08 Aligned_cols=160 Identities=22% Similarity=0.218 Sum_probs=104.7
Q ss_pred CCceEEEEecccccccccCCcEEEEEEEeCCC--EEEeccccccCCCCCCCCCCceEEEEeCCCcEEE-----EEEEeec
Q 013444 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADG--TILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFE-----GTVLNAD 207 (443)
Q Consensus 135 ~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G--~ILTaaHvv~~~~~~~~~~~~~i~V~~~dg~~~~-----a~vv~~d 207 (443)
..+||.|...+ ...|.|+++..+| ++|||+||+.... ..+ +...+++.++ ......|
T Consensus 15 P~svv~l~~~d--------~h~G~g~~V~~~G~~~LlTA~Hv~~~~~-------~~~-~~~k~g~~ip~~~~~~~~~~~d 78 (191)
T 1zyo_A 15 PASLVAIKSGP--------TTIGFGCRTKIDGEDCLLTAHHVWCNSM-------RPT-GLAKAGKQVSVEDWEISMSSSD 78 (191)
T ss_dssp CSSEEEEEETT--------EEEEEEEEEEC--CEEEEECHHHHTSSS-------CCC-EEEETTEEEECCSCEEEEEECC
T ss_pred CCeEEEEEeCC--------eEEEEEEEEEECCCcEEEEChhhCcCCc-------cee-eecCCCCEEEcccceeeEccCC
Confidence 45688887643 2679999997555 9999999997631 111 2233444433 3444457
Q ss_pred CCCCEEEEEEcCC----CCCCccccCCCCCCCCCCEEEEEecCCCCCCceEEEEEEeeecCccCCCCCCccceEEEEccc
Q 013444 208 FHSDIAIVKINSK----TPLPAAKLGTSSKLCPGDWVVAMGCPHSLQNTVTAGIVSCVDRKSSDLGLGGMRREYLQTDCA 283 (443)
Q Consensus 208 ~~~DlAlLkl~~~----~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~ 283 (443)
+..|+||++++.. .....+.|.. ...++.|.++|++.+.......|+.... . ....+++.+.
T Consensus 79 ~~~D~all~vp~~~~s~lg~~~a~~~~---~~~~~~vt~yg~~~~~~~~s~~g~~~~~-~----------~~~~~~~~~~ 144 (191)
T 1zyo_A 79 KMLDFAIVRVPTHVWSKLGVKSTPLVC---PSSKDVITCYGGSSSDCLMSGVGSSSTS-E----------FTWKLTHTCP 144 (191)
T ss_dssp TTTCEEEEECCHHHHHHHTCCCCCBCC---CCSCEEEEEEEESSTTSEEEEEEEEEEC-S----------STTEEEECCC
T ss_pred CCCcEEEEEcCCChhhhcCcceeEeec---CCCCccEEEEeecCCCCEeecccceeec-c----------CCcEEEEEcC
Confidence 7899999999753 1234555532 3358899999998654433333422111 0 1246788999
Q ss_pred CCCCCccceeeecCCCEEEEEEEEeecCCCeEEEEeHHHHHHH
Q 013444 284 INAGNSGGPLVNIDGEIVGINIMKVAAADGLSFAVPIDSAAKI 326 (443)
Q Consensus 284 i~~G~SGGPlvd~~G~VVGI~s~~~~~~~g~~~aIPi~~i~~~ 326 (443)
..+|.||+|+||.+ .||||+.... +....+.++-+..++.+
T Consensus 145 T~~G~SGsP~~ng~-~IVGvh~G~~-~~~~~N~a~n~~~~~~~ 185 (191)
T 1zyo_A 145 TAAGWSGTPLYSSR-GVVGMHVGFE-EIGKLNRGVNMFYVANY 185 (191)
T ss_dssp CCTTCTTCEEECSS-CEEEEEEEEE-ETTTEEEEECHHHHHHH
T ss_pred CCCCCCCCcEEcCC-eEEEEEeCcc-cCCceeeeeehHHHhhh
Confidence 99999999999864 8899998754 34568888888777765
No 121
>2vnt_A Urokinase-type plasminogen activator; UPA, inhibitor complex, hydrolase; HET: QGG; 2.2A {Homo sapiens}
Probab=99.27 E-value=5.3e-10 Score=107.25 Aligned_cols=191 Identities=19% Similarity=0.188 Sum_probs=111.7
Q ss_pred HhCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeC---------CCcEEEEEE
Q 013444 133 RVCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQ---------DGRTFEGTV 203 (443)
Q Consensus 133 ~~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~---------dg~~~~a~v 203 (443)
.-.|.+|.|........ ....|.|.+|+++ ||||+|||+.+... ...+.|.+. .+..+..+.
T Consensus 33 ~~~Pw~v~l~~~~~~~~---~~~~CgGsLIs~~-~VLTAAHCv~~~~~-----~~~~~v~~g~~~~~~~~~~~~~~~v~~ 103 (276)
T 2vnt_A 33 ENQPWFAAIYRRHRGGS---VTYVCGGSLMSPC-WVISATHCFIDYPK-----KEDYIVYLGRSRLNSNTQGEMKFEVEN 103 (276)
T ss_dssp GGSTTEEEEEEECSSSC---EEEEEEEEEEETT-EEEECGGGTTTCCC-----GGGEEEEESCCBSSSCCTTCEEEEEEE
T ss_pred CCCCcEEEEEEecCCCc---ceeEEEEEEeeCC-EEEECcccccCCCC-----CccEEEEeeeeeccCCCCceEEEEEEE
Confidence 44689999976543211 1256999999988 99999999976321 123444432 224555665
Q ss_pred EeecCC---------CCEEEEEEcCC--------CCCCccccCCC-CCCCCCCEEEEEecCCCCC------CceEEEEEE
Q 013444 204 LNADFH---------SDIAIVKINSK--------TPLPAAKLGTS-SKLCPGDWVVAMGCPHSLQ------NTVTAGIVS 259 (443)
Q Consensus 204 v~~d~~---------~DlAlLkl~~~--------~~~~~~~l~~s-~~~~~G~~V~~iG~p~~~~------~~~t~G~Vs 259 (443)
+..|+. .|||||+++.+ ..+.++.|... ..+..|..+.+.||..... .......+.
T Consensus 104 i~~Hp~y~~~~~~~~~Diall~L~~~~~~~~~~~~~v~picL~~~~~~~~~~~~~~~~g~G~~~~~~~~~~~~l~~~~~~ 183 (276)
T 2vnt_A 104 LILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVK 183 (276)
T ss_dssp EEECTTCEECSSCEESCCEEEEEECTTSCCCCCCSSCCCCBCCCSSCCCCTTCEEEEEESCCSSTTCSCCCSBCEEEEEE
T ss_pred EEEccccccccccccchhhhhhhhccccccccCcccccccccccccccccccceEEEEEeeccccCCCCcchhheeeeee
Confidence 555543 59999999753 23446666432 3456789999999876422 122222222
Q ss_pred eeecCccCCCCC---CccceEEEE-----cccCCCCCccceeeec-CCC--EEEEEEEEeecC--CCeEEEEeHHHHHHH
Q 013444 260 CVDRKSSDLGLG---GMRREYLQT-----DCAINAGNSGGPLVNI-DGE--IVGINIMKVAAA--DGLSFAVPIDSAAKI 326 (443)
Q Consensus 260 ~~~~~~~~~~~~---~~~~~~i~~-----d~~i~~G~SGGPlvd~-~G~--VVGI~s~~~~~~--~g~~~aIPi~~i~~~ 326 (443)
-+....+...+. ......+.. ....|.|+|||||+-. +|+ ++||++++..-. ..-+.+.-+...+++
T Consensus 184 i~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~C~GDSGGPLv~~~~~~~~lvGIvS~G~~C~~~~~P~vyt~V~~y~~W 263 (276)
T 2vnt_A 184 LISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPW 263 (276)
T ss_dssp EECHHHHTSTTTTGGGSCTTEEEEECTTSCCCCCTTCTTCEEEEEETTEEEEEEEEEECSSSSBTTBCEEEEEGGGGHHH
T ss_pred EecHHHhhhhhccCcccCccceeeccCCCCCCCCCCCCCCeEEEeeCCeEEEEEEEEECCCCCCCCCCEEEEEHHHHHHH
Confidence 222222211110 011122222 2357999999999843 343 999999875321 112445667777888
Q ss_pred HHHHHH
Q 013444 327 IEQFKK 332 (443)
Q Consensus 327 l~~l~~ 332 (443)
|++..+
T Consensus 264 I~~~~~ 269 (276)
T 2vnt_A 264 IRSHTK 269 (276)
T ss_dssp HHHHHS
T ss_pred HHHHhh
Confidence 877654
No 122
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=99.26 E-value=1.3e-11 Score=99.61 Aligned_cols=72 Identities=21% Similarity=0.383 Sum_probs=65.6
Q ss_pred CCceEEeEECCCCccccCCCCCCCEEEEECCEeeCCHHHHHHHHhc-CCCCeEEEEEEECCCeEEEEEEEecCCC
Q 013444 367 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEIIEIMGD-RVGEPLKVVVQRANDQLVTLTVIPEEAN 440 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s~~dl~~~l~~-~~g~~v~l~v~R~~g~~~~l~v~~~~~~ 440 (443)
..|++|..|.++|||++ ||++||+|++|||+++.++.++..++.. ..|+++.|+|.| +|+.+++++++.+.+
T Consensus 4 ~~Gv~V~~V~~~spA~~-GL~~GD~Il~InG~~v~~~~~l~~~l~~~~~g~~v~l~v~R-~g~~~~~~v~~~~~~ 76 (94)
T 2kl1_A 4 AKGVYVMSVLPNMPAAG-RLEAGDRIAAIDGQPINTSEQIVSYVREKQAGDRVRVTFIR-DRKQHEAELVLKPFP 76 (94)
T ss_dssp CCCEECCCCCTTSTTBT-TBCTTCEEEEETTBCCCCHHHHHHHHHHSCTTCCEEEEEEE-TTEEEEEEECCCBCS
T ss_pred CCcEEEEEECCCChHHh-CCCCCCEEEEECCEECCCHHHHHHHHHhCCCCCEEEEEEEE-CCEEEEEEEEEeeCC
Confidence 46899999999999999 9999999999999999999999998877 479999999999 899999999887554
No 123
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=99.25 E-value=1.4e-11 Score=97.88 Aligned_cols=68 Identities=12% Similarity=0.124 Sum_probs=60.5
Q ss_pred CCceEEeEECCCCccccCCCCCCCEEEEECCEeeCCHHHHHHHHhc-CCCCeEEEEEEECCCeEEEEEEE
Q 013444 367 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEIIEIMGD-RVGEPLKVVVQRANDQLVTLTVI 435 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s~~dl~~~l~~-~~g~~v~l~v~R~~g~~~~l~v~ 435 (443)
..|+.|..+.|+|||+++||++||+|++|||++|.+|.++.+++.. ..|+++.++|.| +|+..+++++
T Consensus 18 ~~G~~V~~~~~~s~A~~aGl~~GD~I~~ing~~v~~~~d~~~~~~~~~~g~~v~l~v~R-~g~~~~~~v~ 86 (87)
T 2i6v_A 18 VLGYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDPNVMNTLFQSMNEMTEMSLTVER-DGQQHDVYIQ 86 (87)
T ss_dssp EEEEEEEECSCHHHHHHTTCCTTCEEEEETTEETTCHHHHHHHHHTGGGCSEEEEEEEE-TTEEEEEEEE
T ss_pred EEEEEEEeCCCCCHHHHCCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEE-CCEEEEEEEE
Confidence 3588888899999999999999999999999999999999988876 568899999999 7888777765
No 124
>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A
Probab=99.23 E-value=3.1e-10 Score=115.32 Aligned_cols=184 Identities=18% Similarity=0.175 Sum_probs=112.9
Q ss_pred HhCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC-------CcEEEEEEEe
Q 013444 133 RVCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD-------GRTFEGTVLN 205 (443)
Q Consensus 133 ~~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d-------g~~~~a~vv~ 205 (443)
.-.|.+|.|.. ...|.|.+|+++ ||||+|||+.+.... ...+.|.+.. .+.+..+-+.
T Consensus 171 ~~~Pw~v~l~~----------~~~CgGsLIs~~-~VLTAAHC~~~~~~~----~~~~~V~~G~~~~~~~~~~~~~v~~i~ 235 (403)
T 1zjk_A 171 GDFPWQVLILG----------GTTAAGALLYDN-WVLTAAHAVYEQKHD----ASALDIRMGTLKRLSPHYTQAWSEAVF 235 (403)
T ss_dssp TSSTTEEEEEE----------SCCEEEEEETTT-EEEECHHHHGGGTTC----STTEEEEESCSBTTCSCCEEEEEEEEE
T ss_pred CCcCCEeEecc----------CCceEEEEecCC-EEEEcHHhCCCCCCC----cceEEEEccccccCCCCceEEeEEEEE
Confidence 34577888864 135999999987 999999999753211 2345565542 2344555555
Q ss_pred ecC--------CCCEEEEEEcCCC----CCCccccCCCCC---CCCCCEEEEEecCCCCC----CceEEEEEEeeecCcc
Q 013444 206 ADF--------HSDIAIVKINSKT----PLPAAKLGTSSK---LCPGDWVVAMGCPHSLQ----NTVTAGIVSCVDRKSS 266 (443)
Q Consensus 206 ~d~--------~~DlAlLkl~~~~----~~~~~~l~~s~~---~~~G~~V~~iG~p~~~~----~~~t~G~Vs~~~~~~~ 266 (443)
.|+ .+|||||+|+.+. .+.|+.|..... +..|+.+++.||..... ..+....+..+....+
T Consensus 236 ~Hp~y~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~v~GWG~~~~~~~~~~L~~~~v~v~~~~~C 315 (403)
T 1zjk_A 236 IHEGYTHDAGFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQRGFLARNLMYVDIPIVDHQKC 315 (403)
T ss_dssp ECTTCCTTSCCTTCCEEEEESSCCCCBTTBCCCBCCCGGGGGGSSTTCEEEEEESCTTSSSCCCSBCEEEEEEEECHHHH
T ss_pred ECCCCCCCCCCcccEEEEEeCCcCcCCCceecccCCCcccccccCCCCeEEEEcCCcCCCCccCcccEEEEEeEeCHHHH
Confidence 543 3699999999763 356777754332 56799999999986432 2333444433332222
Q ss_pred C--CCC-----CCccceEEEEc-----ccCCCCCccceeeec---CC--CEEEEEEEEeecC---CCeEEEEeHHHHHHH
Q 013444 267 D--LGL-----GGMRREYLQTD-----CAINAGNSGGPLVNI---DG--EIVGINIMKVAAA---DGLSFAVPIDSAAKI 326 (443)
Q Consensus 267 ~--~~~-----~~~~~~~i~~d-----~~i~~G~SGGPlvd~---~G--~VVGI~s~~~~~~---~g~~~aIPi~~i~~~ 326 (443)
. +.. ......+|... ...|.|+|||||+-. +| .++||++++...- ..-+.+.-+....++
T Consensus 316 ~~~~~~~~~~~~~i~~~~~Cag~~~~~~~~C~GDSGGPL~~~~~~~~~~~l~GIvS~g~~~C~~~~~p~vyt~V~~y~~W 395 (403)
T 1zjk_A 316 TAAYEKPPYPRGSVTANMLCAGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPW 395 (403)
T ss_dssp HHHTTSSSCCSSCSCTTEEEECCSSCCTTSCSCSTTCEEEEEETTTTEEEEEEEEEEECSCC--CCCCEEEEEGGGGHHH
T ss_pred hhhhhccccccCcCCCCeEeeccCCCCCCCCcCCCCccEEEEECCCCcEEEEEEEEECCCCCCCCCCCeEEEEHHHHHHH
Confidence 1 110 01223455542 467999999999853 34 4899999983211 223556777777777
Q ss_pred HHHHH
Q 013444 327 IEQFK 331 (443)
Q Consensus 327 l~~l~ 331 (443)
|++..
T Consensus 396 I~~~i 400 (403)
T 1zjk_A 396 IENII 400 (403)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77654
No 125
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=99.22 E-value=1e-10 Score=115.02 Aligned_cols=183 Identities=14% Similarity=0.154 Sum_probs=110.1
Q ss_pred HhCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeC------CCcEEEEEEEee
Q 013444 133 RVCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQ------DGRTFEGTVLNA 206 (443)
Q Consensus 133 ~~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~------dg~~~~a~vv~~ 206 (443)
.-.|.+|.|.... +...|+|.+|+++ ||||+|||+... ..+.|.+. +.+.+..+-+..
T Consensus 103 ~~~Pw~v~l~~~~-------~~~~CgGtLIs~~-~VLTAAHC~~~~--------~~~~V~~G~~~~~~~~~~~~v~~i~~ 166 (317)
T 3h5c_B 103 QDLPWQVKLTNSE-------GKDFCGGVIIREN-FVLTTAKCSLLH--------RNITVKTYFNRTSQDPLMIKITHVHV 166 (317)
T ss_dssp TCCTTEEEEECSS-------SCEEEEEEEEETT-EEEECHHHHHSC--------SSCEEEECTTSCTTSCEEEEEEEEEE
T ss_pred CCCCcEEEEeccC-------CceeeeeEEeeCC-EEEEChHhcCcC--------CceEEEEeeecCCCCcEEEEeeEEEE
Confidence 3478899997432 2356999999988 999999999753 23445543 235566666666
Q ss_pred cC-------CCCEEEEEEcCCC----CCCccccCCCC----CCCCCCEEEEEecCCCCC---CceEEEEEEeeecCccCC
Q 013444 207 DF-------HSDIAIVKINSKT----PLPAAKLGTSS----KLCPGDWVVAMGCPHSLQ---NTVTAGIVSCVDRKSSDL 268 (443)
Q Consensus 207 d~-------~~DlAlLkl~~~~----~~~~~~l~~s~----~~~~G~~V~~iG~p~~~~---~~~t~G~Vs~~~~~~~~~ 268 (443)
|+ .+|||||+|+.+. .+.|+.|.... .+..|+.+++.||..... ..+....+..+....+..
T Consensus 167 Hp~y~~~~~~~DIALl~L~~pv~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~v~~~~~~~C~~ 246 (317)
T 3h5c_B 167 HMRYDADAGENDLSLLELEWPIQCPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWARNGTDLGNSLTTRPVTLVEGEECGQ 246 (317)
T ss_dssp CTTCBTTTTBSCCEEEEESSCCCTTTSCCCCBCCCHHHHHHTTTTTSCEEEEBCCTTCCSSSCCCBCCEEEEECHHHHHH
T ss_pred CCCCCCCCCCCCeEEEEeCCcccCCCCccceeCCCcccccccccCCCeEEEEecCCCCCCCCccceEEEEEEECHHHHhh
Confidence 65 3599999998753 35577775432 457799999999975211 122222222222211110
Q ss_pred CCC-CccceEEEE--cccCCCCCccceeeec-CCC--EEEEEEEEeecCC-CeEEEEeHHHHHHHHHHHH
Q 013444 269 GLG-GMRREYLQT--DCAINAGNSGGPLVNI-DGE--IVGINIMKVAAAD-GLSFAVPIDSAAKIIEQFK 331 (443)
Q Consensus 269 ~~~-~~~~~~i~~--d~~i~~G~SGGPlvd~-~G~--VVGI~s~~~~~~~-g~~~aIPi~~i~~~l~~l~ 331 (443)
.+. .....+|.. ....+.|+|||||+-. +|+ ++||++++.-... .-+.+.-+...+++|++..
T Consensus 247 ~~~~~~~~~~~Ca~~~~~~~~gDsGgPl~~~~~~~~~l~Gi~S~g~~~~~~~p~vyt~V~~y~~WI~~~i 316 (317)
T 3h5c_B 247 VLNVTVTTRTYCERSSVAAMHWMDGSVVTREHRGSWFLTGVLGSQPVGGQAHMVLVTKVSRYSLWFKQIM 316 (317)
T ss_dssp HHTCCCCTTEEEEECSCCCCCCCTTCEEEEEETTEEEEEEEECCCCSSCCTTEEEEEEGGGCHHHHHHHH
T ss_pred hhcCcCCCceeECCCCCCCcCCCCCCCEEEecCCEEEEEEEEEECCCCCCCcceEEEEhHHhHHHHHHHh
Confidence 000 011223333 2335689999999954 455 9999987532222 2345566777777776543
No 126
>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1
Probab=99.21 E-value=2.8e-10 Score=112.66 Aligned_cols=180 Identities=16% Similarity=0.127 Sum_probs=106.6
Q ss_pred HhCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC-------CcEEEE---E
Q 013444 133 RVCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD-------GRTFEG---T 202 (443)
Q Consensus 133 ~~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d-------g~~~~a---~ 202 (443)
.-.|..|.|. + ..|.|.+|+++ ||||+|||+.+... ..|.+.. ...+.. +
T Consensus 92 ~~~Pw~v~l~-----~------~~CgGsLIs~~-~VLTAAHC~~~~~~--------~~v~~G~~~~~~~~~~~~~v~~v~ 151 (333)
T 1elv_A 92 KNFPWQVFFD-----N------PWAGGALINEY-WVLTAAHVVEGNRE--------PTMYVGSTSVQTSRLAKSKMLTPE 151 (333)
T ss_dssp GGSTTEEEEE-----T------TEEEEEEEETT-EEEECHHHHTTCSS--------CCEECSCSBCC-------CEECEE
T ss_pred CCcCeEEEec-----C------CceeEEEecCC-EEEehhheeCCCCC--------CeEEEeeeecccCccceeeeeccc
Confidence 3467888883 1 25999999988 99999999976321 1222221 112222 3
Q ss_pred EEeecC--------------CCCEEEEEEcCCC----CCCccccCCCC---CCCCCCEEEEEecCCCCC----CceEEEE
Q 013444 203 VLNADF--------------HSDIAIVKINSKT----PLPAAKLGTSS---KLCPGDWVVAMGCPHSLQ----NTVTAGI 257 (443)
Q Consensus 203 vv~~d~--------------~~DlAlLkl~~~~----~~~~~~l~~s~---~~~~G~~V~~iG~p~~~~----~~~t~G~ 257 (443)
-+..|+ .+|||||+|+.+. .+.|+.|.... .+..|+.+++.||..... ..+....
T Consensus 152 ~i~~Hp~y~~~~~~~~~~~~~nDIALl~L~~~v~~~~~v~PicLp~~~~~~~~~~g~~~~v~GWG~t~~~~~~~~L~~~~ 231 (333)
T 1elv_A 152 HVFIHPGWKLLAVPEGRTNFDNDIALVRLKDPVKMGPTVSPICLPGTSSDYNLMDGDLGLISGWGRTEKRDRAVRLKAAR 231 (333)
T ss_dssp EEEECTTSCCCSSCTTCCCCTTCCEEEEESSCCCCBTTBCCCBCCCSSGGGCCCTTCEEEEEESCCCSSCSSCSBCEEEE
T ss_pred eEEECCCCcccccccccCCCcceEEEEEeCCCCcCCCcccceecCCCcccccccCCcEEEEEECcCcCCCCcCceeEEEE
Confidence 333332 3699999999763 34567775432 245799999999976422 2333333
Q ss_pred EEeeecCccCCCCC----------CccceEEEEc----ccCCCCCccceeeec---CC---CEEEEEEEEeecCCCeEEE
Q 013444 258 VSCVDRKSSDLGLG----------GMRREYLQTD----CAINAGNSGGPLVNI---DG---EIVGINIMKVAAADGLSFA 317 (443)
Q Consensus 258 Vs~~~~~~~~~~~~----------~~~~~~i~~d----~~i~~G~SGGPlvd~---~G---~VVGI~s~~~~~~~g~~~a 317 (443)
+..+....+...+. .....+|... ...|.|+|||||+-. ++ .++||++++..-. ..+.+
T Consensus 232 v~v~~~~~C~~~~~~~~~~~~~~~~~~~~~~Cag~~~~~~~C~GDSGGPL~~~~~~~~~~~~l~GIvS~g~~C~-~~~vy 310 (333)
T 1elv_A 232 LPVAPLRKCKEVKVEKPTADAEAYVFTPNMICAGGEKGMDSCKGDSGGAFAVQDPNDKTKFYAAGLVSWGPQCG-TYGLY 310 (333)
T ss_dssp EEEECHHHHHTC----------CCCCCTTEEEEECSTTCBCCTTCTTCEEEEECSSCTTCEEEEEEEEECSSTT-SEEEE
T ss_pred EEEEcHHHhhhhhhcccccccccccCCCCeECccCCCCCCcCcCcCCCceEEEECCCCcEEEEEEEEeeCCCCC-CCcEE
Confidence 43333222211000 1122345442 357999999999853 23 3899999975322 24666
Q ss_pred EeHHHHHHHHHHHHHc
Q 013444 318 VPIDSAAKIIEQFKKN 333 (443)
Q Consensus 318 IPi~~i~~~l~~l~~~ 333 (443)
.-+.....+|++..+.
T Consensus 311 t~V~~y~~WI~~~~~~ 326 (333)
T 1elv_A 311 TRVKNYVDWIMKTMQE 326 (333)
T ss_dssp EEGGGGHHHHHHHHHH
T ss_pred eEHHHHHHHHHHHHhc
Confidence 7777788888776543
No 127
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.21 E-value=1e-11 Score=105.44 Aligned_cols=88 Identities=18% Similarity=0.305 Sum_probs=73.1
Q ss_pred eecCceeecccHHHHHHhhcCCCCCCCCCCceEEeEECCCCccccCC-CCCCCEEEEECCEeeCCHHHHHHHHhcCCCCe
Q 013444 339 PWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQSITEIIEIMGDRVGEP 417 (443)
Q Consensus 339 p~lGi~~~~~~~~~~~~l~~~~~~~~~~~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s~~dl~~~l~~~~g~~ 417 (443)
.+||+.+..+++. ....|++|..|.+++||+++| |++||+|++|||++|.++.++..+|....|++
T Consensus 32 ~~lG~~~~~~~~~-------------~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~l~~~~g~~ 98 (124)
T 1wh1_A 32 DKLGLTVCYRTDD-------------EDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQNREEAVALLTSEENKN 98 (124)
T ss_dssp CCCCEEEECCCCC-------------SSCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCCSHHHHHHHHTCSSCCS
T ss_pred CcccEEEEecCCC-------------CCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCHHHHHHHHHhCCCCE
Confidence 5789988765432 113699999999999999999 99999999999999999999999998877889
Q ss_pred EEEEEEECCCeEEEEEEEecCCC
Q 013444 418 LKVVVQRANDQLVTLTVIPEEAN 440 (443)
Q Consensus 418 v~l~v~R~~g~~~~l~v~~~~~~ 440 (443)
+.|+|.| +++.++......+..
T Consensus 99 v~l~v~R-~g~~~~~~~~~~~~~ 120 (124)
T 1wh1_A 99 FSLLIAR-PELQLDEGWMDDDSG 120 (124)
T ss_dssp CCEEEEE-CSSCCCCCCCCSSCC
T ss_pred EEEEEEE-CCEEeecccCCCCCC
Confidence 9999999 777666655555443
No 128
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=99.20 E-value=2.8e-11 Score=96.68 Aligned_cols=69 Identities=28% Similarity=0.522 Sum_probs=61.9
Q ss_pred ceEEeEECCCCccccCCCCCCCEEEEECCEeeCCHHHHHHHHhcCCCCeEEEEEEECCCeEEEEEEEecC
Q 013444 369 GVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEIIEIMGDRVGEPLKVVVQRANDQLVTLTVIPEE 438 (443)
Q Consensus 369 g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s~~dl~~~l~~~~g~~v~l~v~R~~g~~~~l~v~~~~ 438 (443)
.++|.+|.++|||+++||++||+|++|||+++.+|+++...+....|+++.++|.| +|+.+++++++.+
T Consensus 5 ~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~~~~g~~v~l~v~R-~g~~~~~~v~~~~ 73 (91)
T 2zpm_A 5 EPVLENVQPNSAASXAGLQAGDRIVXVDGQPLTQWVTFVMLVRDNPGXSLALEIER-QGSPLSLTLIPES 73 (91)
T ss_dssp -CBCSEECTTSHHHHTTCCTTCEEEEETTEECCCHHHHHHHHHHCTTCCEEEEEEE-TTEEEEEEECCEE
T ss_pred CeEEEEECCCChHHhcCCCCCCEEEEECCeEcCCHHHHHHHHhcCCCCeEEEEEEE-CCeEEEEEEEEee
Confidence 46788999999999999999999999999999999999998887788899999999 8888888887653
No 129
>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*
Probab=99.20 E-value=1.3e-10 Score=115.15 Aligned_cols=186 Identities=17% Similarity=0.153 Sum_probs=107.3
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCCC--------cEEEEEEEe
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDG--------RTFEGTVLN 205 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~dg--------~~~~a~vv~ 205 (443)
-.|..|.|.. ...|.|.+|+++ ||||+|||+...... ......+.|.+... ..+..+-+.
T Consensus 100 ~~Pw~v~l~~----------~~~CgGsLIs~~-~VLTAAHCv~~~~~~-~~~~~~~~V~~G~~~~~~~~~~~~~~V~~i~ 167 (329)
T 1md8_A 100 NFPWQVFTNI----------HGRGGGALLGDR-WILTAAHTLYPKEHE-AQSNASLDVFLGHTNVEELMKLGNHPIRRVS 167 (329)
T ss_dssp SCTTEEEEES----------SSEEEEEEETTT-EEEECGGGTSCTTC------CCCCEEESCSBHHHHHHHCCCCEEEEE
T ss_pred CCCCeEeecc----------CCCcceEEecCC-EEEecCCEEEeCCcc-cCCCceEEEEeccccccccccccceeeEEEE
Confidence 3577777753 135999999987 999999999632110 00112344555421 122333333
Q ss_pred ecC----------CCCEEEEEEcCCC----CCCccccCCCCC-CCCCCEEEEEecCCCCC---CceEEEEEEeeecCccC
Q 013444 206 ADF----------HSDIAIVKINSKT----PLPAAKLGTSSK-LCPGDWVVAMGCPHSLQ---NTVTAGIVSCVDRKSSD 267 (443)
Q Consensus 206 ~d~----------~~DlAlLkl~~~~----~~~~~~l~~s~~-~~~G~~V~~iG~p~~~~---~~~t~G~Vs~~~~~~~~ 267 (443)
.|+ .+|||||+|+.+. .+.|+.|..... +..|..+++.||..... ..+....+..+....+.
T Consensus 168 ~Hp~y~~~~~~~~~nDIALl~L~~~v~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~~~~~L~~~~v~i~~~~~C~ 247 (329)
T 1md8_A 168 VHPDYRQDESYNFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKIAHDLRFVRLPVANPQACE 247 (329)
T ss_dssp ECSSCCSSCTTCCTTCCEEEEESSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECCBCSSSBCSBCEEEEEEBCCHHHHH
T ss_pred ECCCcccccCCCCCccEEEEEECCcccCCCceEccccCCCccccCCCCEEEEEeCCCCCCCCCccceEEEEEEcCHHHHH
Confidence 333 3599999998763 355777754332 35789999999975432 23333333333222111
Q ss_pred CC------CCCccceEEEE-----cccCCCCCccceeeec---CC--CEEEEEEEEeecCCCeEEEEeHHHHHHHHHHHH
Q 013444 268 LG------LGGMRREYLQT-----DCAINAGNSGGPLVNI---DG--EIVGINIMKVAAADGLSFAVPIDSAAKIIEQFK 331 (443)
Q Consensus 268 ~~------~~~~~~~~i~~-----d~~i~~G~SGGPlvd~---~G--~VVGI~s~~~~~~~g~~~aIPi~~i~~~l~~l~ 331 (443)
.. .......+|.. ....|.|+|||||+-. ++ .++||++++..-..+.+.+.-+....++|++..
T Consensus 248 ~~~~~~~~~~~~~~~~iCAg~~~~~~d~C~GDSGGPL~~~~~~~~~~~l~GIvS~G~~C~~~~gvyT~V~~y~~WI~~~i 327 (329)
T 1md8_A 248 NWLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCSRGYGFYTKVLNYVDWIKKEM 327 (329)
T ss_dssp HHHHHTTCCCCCCTTEEEESCTTCSCBCCTTTTTCEEEEEETTTTEEEEEEEEEECSSSSSSCEEEEEGGGTHHHHHHHH
T ss_pred HHhhcccccccCCCCeEeeecCCCCCcCCCCccccceEEEECCCCcEEEEEEEEECCCcCCCCcEEEEHHHHHHHHHHHH
Confidence 00 00112234554 2457999999999853 23 489999997532223456677777777777654
No 130
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=99.18 E-value=2.3e-11 Score=97.01 Aligned_cols=59 Identities=25% Similarity=0.363 Sum_probs=54.4
Q ss_pred CceEEeEECCCCccccCCCCCCCEEEEECCEee--CCHHHHHHHHhc-CCCCeEEEEEEECCC
Q 013444 368 SGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPV--QSITEIIEIMGD-RVGEPLKVVVQRAND 427 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V--~s~~dl~~~l~~-~~g~~v~l~v~R~~g 427 (443)
.|++|..|.++|||+++||++||+|++|||++| .++.++..++.. ..++++.|+|.| +|
T Consensus 28 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R-~g 89 (90)
T 2eaq_A 28 PGIFVASVEAGSPAEFSQLQVDDEIIAINNTKFSYNDSKEWEEAMAKAQETGHLVMDVRR-YG 89 (90)
T ss_dssp TEEEEEEECTTSHHHHTTCCTTCEEEEETTEECCTTCHHHHHHHHHHHHHHTEEEEEEEE-EC
T ss_pred CCEEEEEECCCChHHHcCCCCCCEEEEECCEEccCCCHHHHHHHHHhcCCCCEEEEEEEe-CC
Confidence 589999999999999999999999999999999 899999998876 468899999999 54
No 131
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=99.18 E-value=7.3e-11 Score=95.37 Aligned_cols=70 Identities=16% Similarity=0.111 Sum_probs=59.1
Q ss_pred eEEeEECCCCccccCCCCCCCEEEEECCEeeCCHHHHHHHHhcCC-CCeEEEEEEECCC-eEEEEEEEecCC
Q 013444 370 VLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEIIEIMGDRV-GEPLKVVVQRAND-QLVTLTVIPEEA 439 (443)
Q Consensus 370 ~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s~~dl~~~l~~~~-g~~v~l~v~R~~g-~~~~l~v~~~~~ 439 (443)
.+|.+|.++|||+++||++||+|++|||++|.+|+++...+.... ++++.++|.|+++ ...++++.+.+.
T Consensus 4 p~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~d~~~~l~~~~~~~~v~l~v~R~g~~~~~~~~l~l~~~ 75 (95)
T 3id1_A 4 PVVGEIAANSIAAEAQIAPGTELKAVDGIETPDWDAVRLQLVDKIGDESTTITVAPFGSDQRRDVKLDLRHW 75 (95)
T ss_dssp CBEEEECTTSHHHHTTCCTTCEEEEETTEECSSHHHHHHHHHHTTTCSEEEEEEECTTCCCCEEEEEECTTC
T ss_pred CEEEeeCCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHHHhcCCCcEEEEEEECCCCceEEEEEEcccc
Confidence 358899999999999999999999999999999999999887644 4799999999432 556777777653
No 132
>1arb_A Achromobacter protease I; hydrolase(serine protease); 1.20A {Achromobacter lyticus} SCOP: b.47.1.1 PDB: 1arc_A*
Probab=99.18 E-value=1.3e-10 Score=111.72 Aligned_cols=151 Identities=19% Similarity=0.181 Sum_probs=82.8
Q ss_pred HhCCceEEEEecccccccccCCcEEEEEEEeCC-----CEEEeccccccCCCCCCCCCCceEEEEeCC------------
Q 013444 133 RVCPAVVNLSAPREFLGILSGRGIGSGAIVDAD-----GTILTCAHVVVDFHGSRALPKGKVDVTLQD------------ 195 (443)
Q Consensus 133 ~~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~-----G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d------------ 195 (443)
.+..+|++|... +...|+|++|++. .||||||||+...... ...+.|.+..
T Consensus 20 ~~~~aV~rl~~~--------g~~~CGGSLI~~~~~~~~~~VLTAAHCv~~~~~~----~~~~~v~~~~~~~~c~~~~~~~ 87 (268)
T 1arb_A 20 DIIRAVGAYSKS--------GTLACTGSLVNNTANDRKMYFLTAHHCGMGTAST----AASIVVYWNYQNSTCRAPNTPA 87 (268)
T ss_dssp TGGGGEEEEEET--------TEEEEEEEEBCCTTCCCCCEEEEEGGGSCCSHHH----HHTCEEEESCCCSSCCCTTSGG
T ss_pred HhhceEEEEEeC--------CccEEeEEEEcCCCCCCCCEEEEcHHhCCCccCc----ceEEEEEeCCCCCccccccccc
Confidence 457789998742 2367999999972 4999999998641000 0122333310
Q ss_pred --------C-cE-EEEEEEeecCCCCEEEEEEcCCCCCCccccCCCCCCCCCCEEEEEecCCCCCCceE-E------EEE
Q 013444 196 --------G-RT-FEGTVLNADFHSDIAIVKINSKTPLPAAKLGTSSKLCPGDWVVAMGCPHSLQNTVT-A------GIV 258 (443)
Q Consensus 196 --------g-~~-~~a~vv~~d~~~DlAlLkl~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~~t-~------G~V 258 (443)
. +. ....+.+....+|||||||+.+. + .+..+++.||......... . +.+
T Consensus 88 ~~~~~~~~~~~~~v~~~i~h~~~~nDIALLrL~~~v--~-----------~~~~~~vsGWG~t~~~~~~~~~~~~~~~~l 154 (268)
T 1arb_A 88 SGANGDGSMSQTQSGSTVKATYATSDFTLLELNNAA--N-----------PAFNLFWAGWDRRDQNYPGAIAIHHPNVAE 154 (268)
T ss_dssp GGSCCCCCCCCEEECEEEEEEETTTTEEEEEESSCC--C-----------GGGCCEEBCEECCSCCCSCEEEEECGGGCS
T ss_pred cccccCCcceEEeccceEecCCCCCceEEEEecCCC--C-----------CCCceEEeCcCccCCCCCcceeeccCCccc
Confidence 0 11 22334444567999999998641 1 2334566677543211000 0 000
Q ss_pred EeeecCccC---CCCCC-ccceEEEEc-----ccCCCCCccceeeecCCCEEEEEEEEe
Q 013444 259 SCVDRKSSD---LGLGG-MRREYLQTD-----CAINAGNSGGPLVNIDGEIVGINIMKV 308 (443)
Q Consensus 259 s~~~~~~~~---~~~~~-~~~~~i~~d-----~~i~~G~SGGPlvd~~G~VVGI~s~~~ 308 (443)
..+...... ..+.. ....++... ...|.|+|||||+..+++++||++++.
T Consensus 155 ~~i~~~~~~~~~~~~~~~~~~~~iCag~~~~~gdtC~gdsGgPl~~~~~~~~Gi~s~g~ 213 (268)
T 1arb_A 155 KRISNSTSPTSFVAWGGGAGTTHLNVQWQPSGGVTEPGSSGSPIYSPEKRVLGQLHGGP 213 (268)
T ss_dssp CEEEEECSCCEEECTTSSSCSSEEEEECCTTSCCCCTTCTTCEEECTTSCEEEEEEECS
T ss_pred EEEEeeccccccccccccccCCeEEEeeecCCCCCccCcccCCcEeeCCEEEEEEeecC
Confidence 001110000 00111 112344432 248999999999987899999999975
No 133
>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine protease, zymogen; HET: NAG; 2.20A {Homo sapiens}
Probab=99.17 E-value=8e-11 Score=120.61 Aligned_cols=191 Identities=15% Similarity=0.124 Sum_probs=109.0
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC----------CcEEEEEE
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD----------GRTFEGTV 203 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d----------g~~~~a~v 203 (443)
-.|.+|.|..... +...|.|.+|+++ ||||||||+.............+.|.+.. .+.+..+-
T Consensus 176 ~~Pw~v~l~~~~~------~~~~CGGsLIs~~-~VLTAAHCv~~~~~~~~~~~~~~~V~lG~~~~~~~~~~~~~~~~V~~ 248 (424)
T 3nxp_A 176 MSPWQVMLFRKSP------QELLCGASLISDR-WVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEK 248 (424)
T ss_dssp SCTTEEEEEETTT------TEEEEEEEESSSS-EEEECHHHHEEGGGTEECCGGGEEEEESCCBSSSCCTTTCEEECEEE
T ss_pred CCCCEEEEeecCC------CCccceeEEEcCC-EEEEhHHhcCccccccccCcccEEEEeCcccccccCCCceeEEEEEE
Confidence 4577888864321 2356999999987 99999999952110000112356666542 12233444
Q ss_pred EeecC--------CCCEEEEEEcCCC----CCCccccCCCCC----CCCCCEEEEEecCCC----------C-CCceEEE
Q 013444 204 LNADF--------HSDIAIVKINSKT----PLPAAKLGTSSK----LCPGDWVVAMGCPHS----------L-QNTVTAG 256 (443)
Q Consensus 204 v~~d~--------~~DlAlLkl~~~~----~~~~~~l~~s~~----~~~G~~V~~iG~p~~----------~-~~~~t~G 256 (443)
+..|+ .+|||||+|+.+. .+.++.|..... +..|..+++.||... . ...+...
T Consensus 249 ii~Hp~y~~~~~~~nDIALLkL~~pv~~s~~v~PicLp~~~~~~~~~~~g~~~~v~GWG~t~~~~~~~~~~~~~~~L~~~ 328 (424)
T 3nxp_A 249 IYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVV 328 (424)
T ss_dssp EEECTTCBTTTTSBTCCEEEEESSCCCCCSSCCCCBCCCHHHHHHHHHHCSEEEEEESSHHHHHHHHC----CCSBCEEE
T ss_pred EEeCCCCCCCCCCcCCeEEEEecCccccCCcccccCCCCcccccccccCCCeEEEEecCCCCccCccccCCCCCccceEE
Confidence 44444 3599999998752 345666644221 346899999999741 1 2233344
Q ss_pred EEEeeecCccCCCCC-CccceEEEEc--------ccCCCCCccceeeec---CC--CEEEEEEEEeecC--CCeEEEEeH
Q 013444 257 IVSCVDRKSSDLGLG-GMRREYLQTD--------CAINAGNSGGPLVNI---DG--EIVGINIMKVAAA--DGLSFAVPI 320 (443)
Q Consensus 257 ~Vs~~~~~~~~~~~~-~~~~~~i~~d--------~~i~~G~SGGPlvd~---~G--~VVGI~s~~~~~~--~g~~~aIPi 320 (443)
.+..+....+...+. .....+|... ...|.|+|||||+-. +| .++||++++..=. ..-+.+.-+
T Consensus 329 ~v~ii~~~~C~~~~~~~i~~~~iCAg~~~~~~~~~d~C~GDSGGPLv~~~~~~~~~~l~GIvS~G~~C~~~~~pgVyT~V 408 (424)
T 3nxp_A 329 NLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHV 408 (424)
T ss_dssp EEEBCCHHHHHHTCSSCCCTTEEEESCCCBTTBCCCTTCSCTTCEEEEECTTTCCEEEEEEECCSSCTTTCCSCEEEEEC
T ss_pred EeeEEcHHHhhhhccCcCCCCeEecccCCCCCCCCccCCCcCCCceEEEECCCCcEEEEEEEEeCCCCCCCCCCEEEEEH
Confidence 443333222211111 1123355542 268999999999843 34 5899999975311 123455666
Q ss_pred HHHHHHHHHHH
Q 013444 321 DSAAKIIEQFK 331 (443)
Q Consensus 321 ~~i~~~l~~l~ 331 (443)
...+++|++..
T Consensus 409 s~y~~WI~~~i 419 (424)
T 3nxp_A 409 FRLKKWIQKVI 419 (424)
T ss_dssp TTCHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 66666666543
No 134
>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1
Probab=99.15 E-value=2.8e-10 Score=115.36 Aligned_cols=175 Identities=17% Similarity=0.161 Sum_probs=99.8
Q ss_pred cEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCCC--------cEEEEEEEeecC----------CCCEEEEE
Q 013444 155 GIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDG--------RTFEGTVLNADF----------HSDIAIVK 216 (443)
Q Consensus 155 ~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~dg--------~~~~a~vv~~d~----------~~DlAlLk 216 (443)
..|.|.+|+++ ||||||||+...... ......+.|.+... ..+..+-+..|+ .+|||||+
T Consensus 179 ~~CgGsLIs~~-~VLTAAHC~~~~~~~-~~~~~~~~v~~G~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~DIALl~ 256 (399)
T 1gpz_A 179 GRGGGALLGDR-WILTAAHTLYPKEHE-AQSNASLDVFLGHTNVEELMKLGNHPIRRVSVHPDYRQDESYNFEGDIALLE 256 (399)
T ss_dssp SEEEEEEETTT-EEEECGGGTSCTTC------CCCEEEESCSBHHHHHHTCCCCEEEEEECSSCCSSSSSCCTTCCEEEE
T ss_pred CCeEEEEeCCC-EEEeChhcccccccc-cCCcceEEEEeccccccccccccccceEEEEECCCCCcCCCCCCCCcEEEEE
Confidence 35999999987 999999999753211 00112345555421 123333344443 25999999
Q ss_pred EcCCC----CCCccccCCCCC-CCCCCEEEEEecCCCC---CCceEEEEEEeeecCccCCCCC------CccceEEEE--
Q 013444 217 INSKT----PLPAAKLGTSSK-LCPGDWVVAMGCPHSL---QNTVTAGIVSCVDRKSSDLGLG------GMRREYLQT-- 280 (443)
Q Consensus 217 l~~~~----~~~~~~l~~s~~-~~~G~~V~~iG~p~~~---~~~~t~G~Vs~~~~~~~~~~~~------~~~~~~i~~-- 280 (443)
|+.+. .+.|+.|..... +..|..+++.||.... ...+....+..+....+...+. .....+|..
T Consensus 257 L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Cag~ 336 (399)
T 1gpz_A 257 LENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKIAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGH 336 (399)
T ss_dssp ESSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECC-----CCSBCEEEEEEEECHHHHHC-----------CCSEEEEEC
T ss_pred ECCcCcCCCceeeeecCCCccccCCCCEEEEEccCCCCCccCccceEEEEEEcCHHHhhhhhhcccccCcCCCCeEeccc
Confidence 98763 355777755332 3578999999997532 1233333333333222211110 111234444
Q ss_pred ---cccCCCCCccceeeec---CC--CEEEEEEEEeecCCCeEEEEeHHHHHHHHHHHH
Q 013444 281 ---DCAINAGNSGGPLVNI---DG--EIVGINIMKVAAADGLSFAVPIDSAAKIIEQFK 331 (443)
Q Consensus 281 ---d~~i~~G~SGGPlvd~---~G--~VVGI~s~~~~~~~g~~~aIPi~~i~~~l~~l~ 331 (443)
....|.|+|||||+-. ++ .++||++++..-..+.+.+.-+....++|++..
T Consensus 337 ~~~~~d~C~GDSGGPl~~~~~~~~~~~l~GivS~g~~C~~~~~vyt~V~~y~~WI~~~~ 395 (399)
T 1gpz_A 337 PSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCSRGYGFYTKVLNYVDWIKKEM 395 (399)
T ss_dssp GGGGGGGGCSCSSCEEEEEETTTTEEEEEEEECCCTTTTTTEEEEEEGGGGHHHHHHHT
T ss_pred CCCCCccCCCCCchHeEEEECCCCeEEEEEEEEeCCCcCCCCeEEEEhHHhHHHHHHHh
Confidence 2367999999999843 23 489999987532223466677777777776654
No 135
>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase, innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila melanogaster}
Probab=99.15 E-value=7.4e-10 Score=112.80 Aligned_cols=189 Identities=17% Similarity=0.140 Sum_probs=112.8
Q ss_pred HhCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC-----------------
Q 013444 133 RVCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD----------------- 195 (443)
Q Consensus 133 ~~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d----------------- 195 (443)
.-.|.+|.|..... + .....|.|.+|+++ ||||+|||+.+.. ...+.|++..
T Consensus 128 ~e~Pw~v~L~~~~~--g--~~~~~CGGsLIs~~-~VLTAAHCv~~~~------~~~~~V~lG~~~~~~~~~~~~~~~~~~ 196 (408)
T 2xxl_A 128 SSRPWMALLRYQQF--G--ESRFLCGGAMISER-YILTAAHCVHGLQ------NDLYEIRLGEHRISTEEDCRQQGRKKK 196 (408)
T ss_dssp TSSTTEEEEEEECS--S--SEEEEEEEEEEETT-EEEECGGGTTTCT------TTEEEEEESCSBTTCSCCEEEETTEEE
T ss_pred CCCCcEEEEEeecC--C--ceeEEEEEEEEECC-EEEEcHHhcCCCC------CceEEEEeeeeECCCccchhhcccccc
Confidence 34688999875432 1 11256999999988 9999999997532 2345565532
Q ss_pred ----CcEEEEEEEeecCC-------CCEEEEEEcCCC----CCCccccCCCCC----CCCCCEEEEEecCCCCC----Cc
Q 013444 196 ----GRTFEGTVLNADFH-------SDIAIVKINSKT----PLPAAKLGTSSK----LCPGDWVVAMGCPHSLQ----NT 252 (443)
Q Consensus 196 ----g~~~~a~vv~~d~~-------~DlAlLkl~~~~----~~~~~~l~~s~~----~~~G~~V~~iG~p~~~~----~~ 252 (443)
...+..+-+..|+. +|||||+++.+. .+.|+.|..... ...|..+++.||..... ..
T Consensus 197 c~~~~~~~~V~~ii~Hp~y~~~~~~nDIALL~L~~~v~~~~~V~PICLp~~~~~~~~~~~~~~~~v~GWG~t~~~~~s~~ 276 (408)
T 2xxl_A 197 CAPPVVNVGIEKHLIHEKYDARHIMHDIALLKLNRSVPFQKHIKPICLPITDELKEKAEQISTYFVTGWGTTENGSSSDV 276 (408)
T ss_dssp ECCCCEEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCCBTTBCCCBCCCSHHHHHHTTTCSEEEEEECCCBTTBCSCSB
T ss_pred cCCceEEEeEEEEEeCCCCCccccccceEEEEECCccccccCccccCCCCcccccccccCCCEEEEEEeCcCCCCCCCch
Confidence 12344444555543 699999998763 356777754322 46789999999976422 22
Q ss_pred eEEEEEEeeecCccCCCCCC-ccceEEEEc----ccCCCCCcccee------eec-CC--CEEEEEEEEeecC---CCeE
Q 013444 253 VTAGIVSCVDRKSSDLGLGG-MRREYLQTD----CAINAGNSGGPL------VNI-DG--EIVGINIMKVAAA---DGLS 315 (443)
Q Consensus 253 ~t~G~Vs~~~~~~~~~~~~~-~~~~~i~~d----~~i~~G~SGGPl------vd~-~G--~VVGI~s~~~~~~---~g~~ 315 (443)
+....+.-+....+...+.. .....|... ...|.|+||||| +-. +| .++||++++.... ..-+
T Consensus 277 L~~~~v~iv~~~~C~~~~~~~~~~~~iCAg~~~g~d~C~GDSGGPL~~~~~~~~~~~~~~~l~GIvS~G~~~Cg~~~~Pg 356 (408)
T 2xxl_A 277 LLQANVPLQPRSACSQAYRRAVPLSQLCVGGGDLQDSCKGDSGGPLQAPAQYLGEYAPKMVEFGIVSQGVVTCGQISLPG 356 (408)
T ss_dssp CEEEEEEEECHHHHHHHHTSCCCTTEEEECCSCSSSGGGSCTTCEEEEEECCTTCSSCEEEEEEEEEECCCCTTSCCCCE
T ss_pred heEeeeeecCHHHHHHHhcccCCCceEeecCCCCCccCCCcccChhhcCccceEEECCEEEEEEEEEECCCCCCCCCCCe
Confidence 33333333332222100000 011344432 357899999999 422 33 6899999984221 1234
Q ss_pred EEEeHHHHHHHHHHHHH
Q 013444 316 FAVPIDSAAKIIEQFKK 332 (443)
Q Consensus 316 ~aIPi~~i~~~l~~l~~ 332 (443)
.+.-+....++|++..+
T Consensus 357 VYTrVs~y~~WI~~~i~ 373 (408)
T 2xxl_A 357 LYTNVGEYVQWITDTMA 373 (408)
T ss_dssp EEEEGGGGHHHHHHHHH
T ss_pred EEEEHHHHHHHHHHHHh
Confidence 55667777888877654
No 136
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=99.15 E-value=7.9e-11 Score=96.28 Aligned_cols=82 Identities=22% Similarity=0.336 Sum_probs=61.3
Q ss_pred eeeecCceeecccHHHHHHhhcCCCCCCCCCCceEEeEECCCCccccCC-CCCCCEEEEECCEeeCC--HHHHHHHHhcC
Q 013444 337 VRPWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDR 413 (443)
Q Consensus 337 ~rp~lGi~~~~~~~~~~~~l~~~~~~~~~~~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s--~~dl~~~l~~~ 413 (443)
.++|||+.+..........+.. ....|++|.+|.++|||+++| |++||+|++|||++|.+ ++++.+++...
T Consensus 14 ~~~~lG~~~~~~~~~~~~~~~~------~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 87 (103)
T 2fcf_A 14 PSKSLGISIVGGRGMGSRLSNG------EVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKA 87 (103)
T ss_dssp C-CCCCEEEECCCC-------------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred CCCceeEEEEccCCCCcccccC------CCCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 3579999998766544332211 224699999999999999999 99999999999999988 99999999876
Q ss_pred CCCeEEEEEEEC
Q 013444 414 VGEPLKVVVQRA 425 (443)
Q Consensus 414 ~g~~v~l~v~R~ 425 (443)
. +++.|+|.|.
T Consensus 88 ~-~~v~l~v~r~ 98 (103)
T 2fcf_A 88 G-NPVVFMVQSI 98 (103)
T ss_dssp C-SSEEEEEECC
T ss_pred C-CcEEEEEEEC
Confidence 4 4899999993
No 137
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.14 E-value=7.1e-12 Score=105.21 Aligned_cols=94 Identities=24% Similarity=0.324 Sum_probs=71.2
Q ss_pred HHcCceeeeec----CceeecccHHHHHHhhcCCCCCCCCCCceEEeEECCCCccccCCCCCCCEEEEECCEeeCCHHHH
Q 013444 331 KKNGRVVRPWL----GLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEI 406 (443)
Q Consensus 331 ~~~g~v~rp~l----Gi~~~~~~~~~~~~l~~~~~~~~~~~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s~~dl 406 (443)
.++|++.|+|+ |+++...+..+--.+.. ....|++|..|.+++||+++||++||+|++|||++|.++.++
T Consensus 7 ~~~g~v~r~~l~~~~~v~l~~~~~~lG~~~~~------~~~~gv~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~ 80 (117)
T 1uit_A 7 GGERRKDRPYVEEPRHVKVQKGSEPLGISIVS------GEKGGIYVSKVTVGSIAHQAGLEYGDQLLEFNGINLRSATEQ 80 (117)
T ss_dssp CCCCCSCCCCSCCCEEEEEECSSCCCCEEEEE------CTTSCEEEEEECTTSHHHHHTCCTTCEECEETTEETTTCCHH
T ss_pred cccCccccccCCCCEEEEEEeCCCCccEEEEc------cCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHH
Confidence 35788999999 88877544211101100 123599999999999999999999999999999999999877
Q ss_pred HHHHh-cCCCCeEEEEEEECCCeEEE
Q 013444 407 IEIMG-DRVGEPLKVVVQRANDQLVT 431 (443)
Q Consensus 407 ~~~l~-~~~g~~v~l~v~R~~g~~~~ 431 (443)
...+. ...++++.|+|.| +++..+
T Consensus 81 ~~~~~~~~~g~~v~l~v~r-~~~~~~ 105 (117)
T 1uit_A 81 QARLIIGQQCDTITILAQY-NPHVHQ 105 (117)
T ss_dssp HHHHHTTSCCSEEEEEECC-CSCCCC
T ss_pred HHHHHHHcCCCeEEEEEEE-CCchhh
Confidence 76553 3678899999999 665443
No 138
>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A
Probab=99.12 E-value=1.9e-09 Score=118.03 Aligned_cols=186 Identities=19% Similarity=0.231 Sum_probs=113.5
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEEE
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTVL 204 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d---------g~~~~a~vv 204 (443)
-.|.+|.|.... +...|+|.||+++ +|||||||+..... ...+.|.+.. .+.+...-+
T Consensus 572 ~~PW~VsL~~~~-------~~~~CGGSLIs~~-wVLTAAHCv~~~~~-----~~~~~V~lG~~~~~~~~~~~q~~~V~~i 638 (791)
T 4dur_A 572 SWPWQVSLRTRF-------GMHFCGGTLISPE-WVLTAAHCLEKSPR-----PSSYKVILGAHQEVNLEPHVQEIEVSRL 638 (791)
T ss_dssp SSTTEEEEECTT-------SCEEEEEEEEETT-EEEECGGGGSSCCC-----GGGCEEEESCCBSSSCCTTCEEEEEEEE
T ss_pred CCCeEEEEEecC-------CCeEEEEEEEeCC-EEEECHHHcCCcCC-----CceEEEEeccccccCCCCccEEEEEEEE
Confidence 457888886432 2367999999988 99999999975321 1344555432 234555555
Q ss_pred eecC-CCCEEEEEEcCC----CCCCccccCCCC-CCCCCCEEEEEecCCCC----CCceEEEEEEeeecCccCC---CCC
Q 013444 205 NADF-HSDIAIVKINSK----TPLPAAKLGTSS-KLCPGDWVVAMGCPHSL----QNTVTAGIVSCVDRKSSDL---GLG 271 (443)
Q Consensus 205 ~~d~-~~DlAlLkl~~~----~~~~~~~l~~s~-~~~~G~~V~~iG~p~~~----~~~~t~G~Vs~~~~~~~~~---~~~ 271 (443)
..++ ..|||||+|+.+ ..+.++.|.... .+..|..++++||.... ...+....+..+....+.. ...
T Consensus 639 ~~hp~~nDIALLkL~~pv~~s~~V~PIcLP~~~~~~~~g~~~~vsGWG~t~~~~~s~~L~~~~v~ii~~~~C~~~~~~~~ 718 (791)
T 4dur_A 639 FLEPTRKDIALLKLSSPAVITDKVIPACLPSPNYVVADRTECFITGWGETQGTFGAGLLKEAQLPVIENKVCNRYEFLNG 718 (791)
T ss_dssp EECTTCCSCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEECCCC---CCTTBCEEEEEEEECHHHHTSTTTTTT
T ss_pred ECCCCCCceEEEEecCccccCCceeeeeccCcccccCCCCEEEEEEeCCCCCCCCCCeeEEEEEEEeCHHHhhcccccCC
Confidence 5554 479999999875 344566665432 35678999999997632 1223333333333222211 111
Q ss_pred CccceEEEEc-----ccCCCCCccceeeecC-C--CEEEEEEEEeecC--CCeEEEEeHHHHHHHHHHHHH
Q 013444 272 GMRREYLQTD-----CAINAGNSGGPLVNID-G--EIVGINIMKVAAA--DGLSFAVPIDSAAKIIEQFKK 332 (443)
Q Consensus 272 ~~~~~~i~~d-----~~i~~G~SGGPlvd~~-G--~VVGI~s~~~~~~--~g~~~aIPi~~i~~~l~~l~~ 332 (443)
.....+|... ...|.|+|||||+-.+ | .|+||++++..-. ..-+.+.-+.....+|++.++
T Consensus 719 ~i~~~~iCAg~~~gg~daC~GDSGGPLv~~~~~~~~LvGIvS~G~gC~~~~~PgVYTrVs~y~dWI~~~i~ 789 (791)
T 4dur_A 719 RVQSTELCAGHLAGGTDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCARPNKPGVYVRVSRFVTWIEGVMR 789 (791)
T ss_dssp CCCTTEEEESCSSSCCCBCCSCTTCEEEEEETTEEEEEEECCTTTCCBBTTBCEEEEEGGGTHHHHHHHHH
T ss_pred CCCCCeEEeccCCCCCCCCCCCcccceEEEeCCeEEEEEEEEeCCCCCCCCCCeEEEEHHHHHHHHHHHHH
Confidence 1223345442 4578999999999433 3 4999999875311 223556777777888777654
No 139
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=99.10 E-value=2.6e-10 Score=94.65 Aligned_cols=70 Identities=17% Similarity=0.335 Sum_probs=61.7
Q ss_pred CCceEEeEECCCCccccCCC-CCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEECCCeEEEEEEEec
Q 013444 367 KSGVLVPVVTPGSPAHLAGF-LPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQLVTLTVIPE 437 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aGl-~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R~~g~~~~l~v~~~ 437 (443)
..|++|..|.++|||+++|| ++||+|++|||+++.+ ++++.+++....|+++.|+|.| +++..++.+.+.
T Consensus 25 ~~~~~V~~v~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~R-~g~~~~~~~~~~ 97 (112)
T 1qau_A 25 KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLILR-GPEGFTTHLETT 97 (112)
T ss_dssp SSCEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTSCHHHHHHHHHHSCSSSEEEEEEE-CCTTSEEEEEEE
T ss_pred CCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCcEEEEEEe-CCcccceEeeee
Confidence 35899999999999999998 9999999999999999 9999999987778999999999 676656666544
No 140
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.09 E-value=2.9e-10 Score=92.49 Aligned_cols=73 Identities=22% Similarity=0.376 Sum_probs=60.8
Q ss_pred eeecCceeecccHHHHHHhhcCCCCCCCCCCceEEeEECCCCccccCCCCCCCEEEEECCEeeCC--HHHHHHHHhcCCC
Q 013444 338 RPWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVG 415 (443)
Q Consensus 338 rp~lGi~~~~~~~~~~~~l~~~~~~~~~~~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s--~~dl~~~l~~~~g 415 (443)
.+|||+.+..... ...|++|..|.++|||+++||++||+|++|||++|.+ +.++...+.. +
T Consensus 21 ~~~lG~~~~~~~~---------------~~~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~--~ 83 (100)
T 2eeh_A 21 AGRLGFSVRGGSE---------------HGLGIFVSKVEEGSSAERAGLCVGDKITEVNGLSLESTTMGSAVKVLTS--S 83 (100)
T ss_dssp SSSCSEEEECCTT---------------TTCCEEEEEECTTSHHHHHTCCSSCEEEEETTEECSSCCHHHHHHHHHS--C
T ss_pred CCCccEEEEcccc---------------CCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHhhcC--C
Confidence 4789999876421 1369999999999999999999999999999999988 4666666655 7
Q ss_pred CeEEEEEEECCCe
Q 013444 416 EPLKVVVQRANDQ 428 (443)
Q Consensus 416 ~~v~l~v~R~~g~ 428 (443)
+++.|+|.| +++
T Consensus 84 ~~v~l~v~R-~g~ 95 (100)
T 2eeh_A 84 SRLHMMVRR-MGS 95 (100)
T ss_dssp SSEEEEEEE-CSC
T ss_pred CEEEEEEEE-CCc
Confidence 899999999 554
No 141
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.08 E-value=1.1e-10 Score=93.33 Aligned_cols=59 Identities=25% Similarity=0.496 Sum_probs=52.3
Q ss_pred CceEEeEECCCCccccCCCCCCCEEEEECCEeeC--CHHHHHHHHhcCCCCeEEEEEEECCCe
Q 013444 368 SGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPLKVVVQRANDQ 428 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~--s~~dl~~~l~~~~g~~v~l~v~R~~g~ 428 (443)
.|++|..|.++|||+++||++||+|++|||+++. +++++.+++... ++++.|+|.| +++
T Consensus 27 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~r-~~~ 87 (91)
T 2vsp_A 27 PGSFIKEVQKGGPADLAGLEDEDVIIEVNGVNVLDEPYEKVVDRIQSS-GKNVTLLVCG-KKA 87 (91)
T ss_dssp SCCBC-CCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHTTS-CSEEEEEEEC----
T ss_pred CCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCEEEEEEEe-CCc
Confidence 5889999999999999999999999999999999 999999999877 8999999999 544
No 142
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=99.08 E-value=2.5e-10 Score=91.15 Aligned_cols=66 Identities=30% Similarity=0.424 Sum_probs=51.9
Q ss_pred CceEEeEECCCCccccCC-CCCCCEEEEECCEeeC--CHHHHHHHHhcCCCCeEEEEEEECCCeEEEEEEE
Q 013444 368 SGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPLKVVVQRANDQLVTLTVI 435 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~--s~~dl~~~l~~~~g~~v~l~v~R~~g~~~~l~v~ 435 (443)
.|++|.+|.++|||+++| |++||+|++|||+++. ++.++.+++.... +++.++|.| +++..++++.
T Consensus 23 ~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~r-~g~~~~~~v~ 91 (92)
T 3cyy_A 23 SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSK-GKLKMVVQR-DERATLLNVP 91 (92)
T ss_dssp EEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTT-TEEEEEEEC-----------
T ss_pred CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CcEEEEEEe-CCceeeeeCC
Confidence 589999999999999999 9999999999999999 9999999887643 489999999 7777666654
No 143
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*
Probab=99.07 E-value=3.6e-10 Score=123.39 Aligned_cols=190 Identities=21% Similarity=0.209 Sum_probs=108.8
Q ss_pred CCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeC-CCcEEEEEEEeecC-----
Q 013444 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQ-DGRTFEGTVLNADF----- 208 (443)
Q Consensus 135 ~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~-dg~~~~a~vv~~d~----- 208 (443)
.|.+|.|...... .+...|+|.+|+++ ||||+|||+..... ...+.|.+. ..+.+..+-+..|+
T Consensus 468 ~Pw~~~v~~~~~~----~~~~~CgGsLIs~~-~VLTAAHC~~~~~~-----~~~~~V~~G~~~~~~~v~~i~~Hp~y~~~ 537 (741)
T 3hrz_D 468 QPWQAKISVIRPS----KGHESCMGAVVSEY-FVLTAAHCFTVDDK-----EHSIKVSVGGEKRDLEIEVVLFHPNYNIN 537 (741)
T ss_dssp CTTEEEEEECCCC---------EEEEECSSS-EEEECGGGCC----------CCEEEEETTCSCCEEEEEEEECTTCCTT
T ss_pred cCCeEEEEEEeCC----CCCCEEEEEEecCC-EEEEchhhccccCC-----cceEEEEeCCCceEEEEEEEEECCCCCcc
Confidence 6677777654221 12356999999988 99999999975211 245677776 34556665555554
Q ss_pred -----------CCCEEEEEEcCCC----CCCccccCCC------CCCCCCCEEEEEecCCCCCC------------ceEE
Q 013444 209 -----------HSDIAIVKINSKT----PLPAAKLGTS------SKLCPGDWVVAMGCPHSLQN------------TVTA 255 (443)
Q Consensus 209 -----------~~DlAlLkl~~~~----~~~~~~l~~s------~~~~~G~~V~~iG~p~~~~~------------~~t~ 255 (443)
.+|||||+|+.+. .+.++.|... ..+..|..+.+.||...... .+..
T Consensus 538 ~~~~~~~~~~~~nDIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~~~~~~~~gwg~~~~~~~~~~~~~~~~~~L~~ 617 (741)
T 3hrz_D 538 GKKEAGIPEFYDYDVALIKLKNKLKYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEELLPAQDIKALFVSEEEKKLTR 617 (741)
T ss_dssp TTGGGTCSCCCTTCCEEEEESSCCCCCSSCCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCSSEEEEEEEEESSSCEEE
T ss_pred cccccccCCccCCcEEEEEECCcCcCCCCccccccCCcccccchhccCCCCccccccccccccccccceecccccccccc
Confidence 3499999998753 3456666432 12456777777777532221 1222
Q ss_pred EEEEeee---cCccCC------CC-------CCccceEEEE-------cccCCCCCccceeeecC-CC--EEEEEEEEee
Q 013444 256 GIVSCVD---RKSSDL------GL-------GGMRREYLQT-------DCAINAGNSGGPLVNID-GE--IVGINIMKVA 309 (443)
Q Consensus 256 G~Vs~~~---~~~~~~------~~-------~~~~~~~i~~-------d~~i~~G~SGGPlvd~~-G~--VVGI~s~~~~ 309 (443)
..+.-.. ...+.. .+ ......+|.. +...|.|+|||||+-.+ |+ ++||++++..
T Consensus 618 ~~v~i~~~~~~~~C~~~~~~~~~~~~~~~~~~~i~~~~lCag~~~~~~~~~~C~GDSGGPL~~~~~~~~~lvGIvS~G~~ 697 (741)
T 3hrz_D 618 KEVYIKNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVHKRSRFIQVGVISWGVV 697 (741)
T ss_dssp EEEEEECSTTHHHHHHGGGGSTTCTTCSSGGGTSCTTEEEEESSSSSCCCCCCGGGTTCEEEEEETTEEEEEEEEEEESS
T ss_pred ceeEeecCcccchhhhhhhhccccccccccccccCCCeEecCCcCCCCCCCcCcCcccCceEEeeCCeEEEEEEEeecCC
Confidence 2222111 000000 00 0122335554 24478999999999433 33 9999999862
Q ss_pred cCCCe------------EEEEeHHHHHHHHHHHHHcC
Q 013444 310 AADGL------------SFAVPIDSAAKIIEQFKKNG 334 (443)
Q Consensus 310 ~~~g~------------~~aIPi~~i~~~l~~l~~~g 334 (443)
...+. +++.-+...+++|++..+..
T Consensus 698 ~~C~~~~~~~~p~~~~~~vyt~V~~~~~WI~~~i~~~ 734 (741)
T 3hrz_D 698 DVCKNQKRQKQVPAHARDFHINLFQVLPWLKEKLQDE 734 (741)
T ss_dssp CCCC------CCCTTCEEEEEEGGGSHHHHHHHTTTS
T ss_pred cccCCcccccCCCCCccceEEEhHHhHHHHHHHhcCC
Confidence 21111 66777888899998877554
No 144
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=99.07 E-value=9.9e-11 Score=93.52 Aligned_cols=60 Identities=28% Similarity=0.420 Sum_probs=54.9
Q ss_pred CceEEeEECCCCccccCCCCCCCEEEEECCEeeCCHH--HHHHHHhcCCCCeEEEEEEECCCeE
Q 013444 368 SGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSIT--EIIEIMGDRVGEPLKVVVQRANDQL 429 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s~~--dl~~~l~~~~g~~v~l~v~R~~g~~ 429 (443)
.|++|..|.++|||+++||++||+|++|||+++.++. ++..++.. .++++.|+|.| +++.
T Consensus 27 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~R-~g~~ 88 (91)
T 2pkt_A 27 QPLAISRVTPGSKAALANLCIGDVITAIDGENTSNMTHLEAQNRIKG-CTDNLTLTVAR-SEHE 88 (91)
T ss_dssp EEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHT-CSSEEEEEEEE-ECCC
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEE-CCcc
Confidence 5899999999999999999999999999999999988 88888877 88999999999 5554
No 145
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=99.07 E-value=2.6e-10 Score=96.66 Aligned_cols=80 Identities=24% Similarity=0.397 Sum_probs=62.9
Q ss_pred eeecCceeecccHHHHHHhhcCCCCCCCCCCceEEeEECCCCccccCC-CCCCCEEEEECCEeeCC--HHHHHHHHhcCC
Q 013444 338 RPWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRV 414 (443)
Q Consensus 338 rp~lGi~~~~~~~~~~~~l~~~~~~~~~~~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s--~~dl~~~l~~~~ 414 (443)
+++|||.+..........+.. ....|++|.+|.++|||+++| |++||+|++|||++|.+ ++++.+++...
T Consensus 35 ~~~lGi~v~~~~~~~~~~~~~------~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~- 107 (123)
T 2iwq_A 35 SKSLGISIVGGRGMGSRLSNG------EVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKA- 107 (123)
T ss_dssp TSCCSEEEEECC---------------CCCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHC-
T ss_pred CCCccEEEEeccCcccccccc------CCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 579999998776544332221 234699999999999999999 99999999999999988 99999988765
Q ss_pred CCeEEEEEEE
Q 013444 415 GEPLKVVVQR 424 (443)
Q Consensus 415 g~~v~l~v~R 424 (443)
++++.|+|.|
T Consensus 108 ~~~v~l~v~r 117 (123)
T 2iwq_A 108 GNPVVFMVQS 117 (123)
T ss_dssp CSSEEEEEEC
T ss_pred CCeEEEEEEE
Confidence 4489999998
No 146
>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A
Probab=99.07 E-value=5.4e-10 Score=116.23 Aligned_cols=193 Identities=20% Similarity=0.202 Sum_probs=110.8
Q ss_pred HHhCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC-CcEEEEEEEeecC--
Q 013444 132 ARVCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD-GRTFEGTVLNADF-- 208 (443)
Q Consensus 132 ~~~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d-g~~~~a~vv~~d~-- 208 (443)
..-.|.+|.|...... .+...|.|.+|+++ ||||+|||+..... ...+.|.+.. .+.+..+-+..|+
T Consensus 223 ~~~~Pw~v~l~~~~~~----~~~~~CgGsLIs~~-~VLTAAHC~~~~~~-----~~~~~v~~G~~~~~~~v~~i~~Hp~y 292 (497)
T 1rrk_A 223 YHKQPWQAKISVIRPS----KGHESCMGAVVSEY-FVLTAAHCFTVDDK-----EHSIKVSVGGEKRDLEIEVVLFHPNY 292 (497)
T ss_dssp HHHSTTEEEEEECC------CCCEEEEEEECSSS-EEEECGGGCCTTCC-----GGGEEEEETTCSSCEEEEEEEECTTC
T ss_pred ccccCcEEEEEEEcCC----CCCceeEEEEecCC-EEEECHHhCCCCCC-----ceEEEEEeCCccceeeeEEEEeCCCc
Confidence 3456888988754321 12367999999988 99999999975311 2457777765 3455555554443
Q ss_pred --------------CCCEEEEEEcCCC----CCCccccCCCC------CCCCCCEEEEEecCCCC------------CCc
Q 013444 209 --------------HSDIAIVKINSKT----PLPAAKLGTSS------KLCPGDWVVAMGCPHSL------------QNT 252 (443)
Q Consensus 209 --------------~~DlAlLkl~~~~----~~~~~~l~~s~------~~~~G~~V~~iG~p~~~------------~~~ 252 (443)
.+|||||+++.+. .+.|+.|.... .+..|..+++.||.... ...
T Consensus 293 ~~~~~~~~~~~~~~~nDIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~ 372 (497)
T 1rrk_A 293 NINGKKEAGIPEFYDYDVALIKLKNKLKYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEELLPAQDIKALFVSEEEKK 372 (497)
T ss_dssp CTTTTGGGTCSSCCTTCCEEEEESSCCCCBTTBCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCSSEEEEEEEEESSSC
T ss_pred cccccccccccccCCCcEEEEEECCCCcCCCCeeeeeCCCCCccccccccCCCCchhcccccccCCccccceeeccCCCc
Confidence 3599999998763 35677775432 24556655555543211 112
Q ss_pred eEEEEEEeee---cCccCC------CCC-------CccceEEEEc-------ccCCCCCccceeeec-CC--CEEEEEEE
Q 013444 253 VTAGIVSCVD---RKSSDL------GLG-------GMRREYLQTD-------CAINAGNSGGPLVNI-DG--EIVGINIM 306 (443)
Q Consensus 253 ~t~G~Vs~~~---~~~~~~------~~~-------~~~~~~i~~d-------~~i~~G~SGGPlvd~-~G--~VVGI~s~ 306 (443)
+....+.-+. ...|.. .+. ......|+.. ...|.|+|||||+-. +| .++||+++
T Consensus 373 L~~~~v~i~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~iCag~~~~~~~~~~C~GDSGGPL~~~~~~~~~l~GIvS~ 452 (497)
T 1rrk_A 373 LTRKEVYIKNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVHKRSRFIQVGVISW 452 (497)
T ss_dssp EEEEEEEEECSTTHHHHHHGGGGSTTCTTCSCGGGTSCTTEEEEESSSSSCCCCCCGGGTTCEEEEEETTEEEEEEEEEE
T ss_pred ceeeeEEEecCcccchhhhhhhhcccccccccccccCCCCeEEeCCCCCCCCCcCCCCCCCCeeEEEeCCEEEEEEEEEe
Confidence 2222222222 011110 010 1223456653 358999999999943 34 38999999
Q ss_pred Eee-cCC---------Ce--EEEEeHHHHHHHHHHHHHcC
Q 013444 307 KVA-AAD---------GL--SFAVPIDSAAKIIEQFKKNG 334 (443)
Q Consensus 307 ~~~-~~~---------g~--~~aIPi~~i~~~l~~l~~~g 334 (443)
+.. ... +. +.+.-+....++|++..+..
T Consensus 453 g~~~~C~~~~~~~~~P~~~r~vyt~V~~~~~WI~~~~~~~ 492 (497)
T 1rrk_A 453 GVVDVCKNQKRQKQVPAHARDFHINLFQVLPWLKEKLQDE 492 (497)
T ss_dssp ESCCCC--------CCTTCEEEEEEGGGGHHHHHHHTTTS
T ss_pred cCCCCCCCccccCCCCCccceeeeeHHHHHHHHHHHhCcc
Confidence 863 111 10 24555777888887766543
No 147
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=99.06 E-value=3.3e-10 Score=92.72 Aligned_cols=84 Identities=21% Similarity=0.296 Sum_probs=64.2
Q ss_pred eeeecCceee-cccHHHHHHhhcCCCCCCCCCCceEEeEECCCCccccCCCCCCCEEEEECCEeeCC--HHHHHHHHhcC
Q 013444 337 VRPWLGLKML-DLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQS--ITEIIEIMGDR 413 (443)
Q Consensus 337 ~rp~lGi~~~-~~~~~~~~~l~~~~~~~~~~~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s--~~dl~~~l~~~ 413 (443)
.+++|||.+. ..+.+.. +. .........|++|..|.++|||+++||++||+|++|||+++.+ ++++...+...
T Consensus 17 ~~~~lG~~i~g~~~~~~~-~~---~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 92 (104)
T 3sfj_A 17 ENLILGFSIGGGIDQDPS-QN---PFSEDKTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQARKRLTKR 92 (104)
T ss_dssp TEEECSEEEEECTTSCGG-GC---SSCSSTTCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHTCT
T ss_pred CCCcccEEEECccccCcc-cc---ccccCCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 3568999987 2221110 00 0001133579999999999999999999999999999999965 77999999877
Q ss_pred CCCeEEEEEEE
Q 013444 414 VGEPLKVVVQR 424 (443)
Q Consensus 414 ~g~~v~l~v~R 424 (443)
.|+++.|+|.|
T Consensus 93 ~g~~v~l~v~R 103 (104)
T 3sfj_A 93 SEEVVRLLVTR 103 (104)
T ss_dssp TCSEEEEEEEE
T ss_pred CCCEEEEEEEc
Confidence 88999999998
No 148
>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A
Probab=99.06 E-value=1.5e-09 Score=116.44 Aligned_cols=186 Identities=18% Similarity=0.152 Sum_probs=102.3
Q ss_pred HhCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC---------CcEEEEEE
Q 013444 133 RVCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD---------GRTFEGTV 203 (443)
Q Consensus 133 ~~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d---------g~~~~a~v 203 (443)
.-.|.+|.|...... +...|.|.+|+++ ||||+|||+.+... ...+.|.+.. +..+..+-
T Consensus 397 ~~~Pw~v~L~~~~~~-----~~~~CgGsLIs~~-~VLTAAHC~~~~~~-----~~~~~V~~G~~~~~~~~~~~~~~~V~~ 465 (625)
T 2f83_A 397 GEWPWQVTLHTTSPT-----QRHLCGGSIIGNQ-WILTAAHCFYGVES-----PKILRVYSGILNQSEIKEDTSFFGVQE 465 (625)
T ss_dssp TSSTTEEEEEECSSS-----SEEEEEEEECSSS-EEEECGGGGSSCCC-----GGGEEEEESCSBGGGCCSSCCCEEEEE
T ss_pred CCCCeEEEEEEecCC-----CcEEEEEEEECCC-EEEEcHHhCCCCCC-----CceEEEEEEeccCCCCCCCceEEeEEE
Confidence 456889999754321 2367999999988 99999999975321 2345565431 23455555
Q ss_pred EeecCC-------CCEEEEEEcCCC----CCCccccCCCC-CCCCCCEEEEEecCCCCC-----CceEEEEEEeeecCcc
Q 013444 204 LNADFH-------SDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPHSLQ-----NTVTAGIVSCVDRKSS 266 (443)
Q Consensus 204 v~~d~~-------~DlAlLkl~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~~~~-----~~~t~G~Vs~~~~~~~ 266 (443)
+..|+. +|||||+|+.+. .+.|+.|.... ....+..+++.||..... ..+....+..+....+
T Consensus 466 ii~Hp~y~~~~~~nDIALlkL~~pv~~~~~v~PicLp~~~~~~~~~~~~~v~GWG~~~~~~~~s~~L~~~~v~i~~~~~C 545 (625)
T 2f83_A 466 IIIHDQYKMAESGYDIALLKLETTVNYTDSQRPICLPSKGDRNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEEC 545 (625)
T ss_dssp EEECTTCCBTTTBCCCEEEEESSCCCCBTTBCCCBCCCGGGTTCCCCCEEECBCC------CCCSBCBCCEECCCCHHHH
T ss_pred EEECCccCcCCccccEEEEEECCcccCCCceeeeEcCCccCCccCCCEEEEEEecCCCCCCcCCcccEEEEEEEcCHHHH
Confidence 556653 599999998763 34566665432 235688899999975321 1222222222221111
Q ss_pred CCCCC--CccceEE-----EEcccCCCCCccceeeec-CC--CEEEEEEEEeecC--CCeEEEEeHHHHHHHHHH
Q 013444 267 DLGLG--GMRREYL-----QTDCAINAGNSGGPLVNI-DG--EIVGINIMKVAAA--DGLSFAVPIDSAAKIIEQ 329 (443)
Q Consensus 267 ~~~~~--~~~~~~i-----~~d~~i~~G~SGGPlvd~-~G--~VVGI~s~~~~~~--~g~~~aIPi~~i~~~l~~ 329 (443)
...+. .....+| ......|.|+|||||+-. +| .++||++++..-. ..-+.+.-+...+++|++
T Consensus 546 ~~~~~~~~i~~~~iCag~~~~~~d~C~GDSGGPLv~~~~~~~~lvGIvS~G~~C~~~~~P~vyT~V~~y~~WI~~ 620 (625)
T 2f83_A 546 QKRYRGHKITHKMICAGYREGGKDACKGDSGGPLSCKHNEVWHLVGITSWGEGCAQRERPGVYTNVVEYVDWILE 620 (625)
T ss_dssp HTTCTTSCCCTTBCCC----------CCCTTCEEEEEETTEEEEEEEEEECCC----CCCCEEEEGGGGHHHHHH
T ss_pred HHHhccCCCCCCeEEeecCCCCCcCCCCCcccceEEEECCeEEEEEEEEeCCCCCCCCCCeEEEEHHHHHHHHHH
Confidence 11010 0111122 123457899999999843 45 5999999975311 112334556666666654
No 149
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=99.04 E-value=1.1e-10 Score=90.70 Aligned_cols=56 Identities=32% Similarity=0.445 Sum_probs=51.6
Q ss_pred CceEEeEECCCCccccCC-CCCCCEEEEECCEeeC--CHHHHHHHHhcCCCCeEEEEEEE
Q 013444 368 SGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPLKVVVQR 424 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~--s~~dl~~~l~~~~g~~v~l~v~R 424 (443)
.|++|.+|.++|||+++| |++||+|++|||+++. ++.++.+++.... +++.++|.|
T Consensus 21 ~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~R 79 (81)
T 2rcz_A 21 SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSK-GKLKMVVQR 79 (81)
T ss_dssp EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTST-TEEEEEEEC
T ss_pred CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCC-CeEEEEEEe
Confidence 689999999999999999 9999999999999999 9999999887654 489999988
No 150
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.04 E-value=1.4e-10 Score=93.50 Aligned_cols=60 Identities=23% Similarity=0.417 Sum_probs=54.9
Q ss_pred CCceEEeEECCCCccccCCCCCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEECCCe
Q 013444 367 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQ 428 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R~~g~ 428 (443)
..|++|..|.++|||+++||++||+|++|||+++.+ ++++..++... |+++.|+|.| +++
T Consensus 29 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~r-~~~ 90 (96)
T 2v90_A 29 RPGQFLWEVDPGLPAKKAGMQAGDRLVAVAGESVEGLGHEETVSRIQGQ-GSCVSLTVVD-PEA 90 (96)
T ss_dssp CEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHTT-TTEEEEEEEC-CCT
T ss_pred CCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCEEEEEEEC-CCC
Confidence 458999999999999999999999999999999998 89999988875 8999999999 554
No 151
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=99.03 E-value=5.7e-10 Score=88.27 Aligned_cols=60 Identities=18% Similarity=0.359 Sum_probs=54.6
Q ss_pred CCceEEeEECCCCccccCCCCCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEECCCe
Q 013444 367 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQ 428 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R~~g~ 428 (443)
..|++|.+|.++|||+++||++||+|++|||+++.+ ++++.+++.... +++.|+|.| +++
T Consensus 25 ~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~R-~~~ 86 (87)
T 2pa1_A 25 HTPIMVTKVAERGKAKDADLRPGDIIVAINGESAEGMLHAEAQSKIRQSP-SPLRLQLDR-ITS 86 (87)
T ss_dssp TEEEEEEEECSSSHHHHTTCCTTCEEEEETTEESTTCCHHHHHHHHHTCC-SSEEEEEEE-CCC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEe-cCC
Confidence 358999999999999999999999999999999999 899999998765 889999999 553
No 152
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}
Probab=99.03 E-value=2.5e-09 Score=113.38 Aligned_cols=184 Identities=16% Similarity=0.087 Sum_probs=92.8
Q ss_pred HhCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeC----------CCcEEEEE
Q 013444 133 RVCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQ----------DGRTFEGT 202 (443)
Q Consensus 133 ~~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~----------dg~~~~a~ 202 (443)
.-.|.+|.|... ....|.|.+|+++ ||||||||+.... ...+.|.+. ....+..+
T Consensus 331 g~~Pw~v~l~~~--------~~~~CGGsLIs~~-~VLTAAHCv~~~~------~~~~~V~~G~~~~~~~~~~~~~~~~V~ 395 (565)
T 2xrc_A 331 GDLPWQVAIKDA--------SGITCGGIYIGGC-WILTAAHCLRASK------THRYQIWTTVVDWIHPDLKRIVIEYVD 395 (565)
T ss_dssp -CCTTBCEEEES--------SSCCCCCEEEETT-EEEECHHHHTTCS------SCCEEEEC-------------CEEEEE
T ss_pred CCCCcEEEEecC--------CceeeeEEEEeCC-EEEEChhhcccCC------CcceEEEEEEeeccCCCCCccEEEEEE
Confidence 345666666521 2246999999988 9999999997632 123444432 12344455
Q ss_pred EEeecC-------CCCEEEEEEcCCCC--------CCccccCCC-CCCCCCCEEEEEecCCCCC----CceEEEEEEeee
Q 013444 203 VLNADF-------HSDIAIVKINSKTP--------LPAAKLGTS-SKLCPGDWVVAMGCPHSLQ----NTVTAGIVSCVD 262 (443)
Q Consensus 203 vv~~d~-------~~DlAlLkl~~~~~--------~~~~~l~~s-~~~~~G~~V~~iG~p~~~~----~~~t~G~Vs~~~ 262 (443)
-+..|+ .+|||||+|+.+.. +.|+.|... ..+..|+.++++||..... ..+....+..+.
T Consensus 396 ~ii~Hp~Y~~~~~~nDIALlkL~~~v~~~~~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~~~~~~L~~~~v~i~~ 475 (565)
T 2xrc_A 396 RIIFHENYNAGTYQNDIALIEMKKDGNKKDCELPRSIPACVPWSPYLFQPNDTCIVSGWGREKDNERVFSLQWGEVKLIS 475 (565)
T ss_dssp EEEECTTCCTTTCTTCCEEEEECCCSSSSCSCCTTCCCCBCCSCTTSSCTTCEEEEEC-------------CEEEEEECS
T ss_pred EEEeCCCCCCCcccccceeeeeccccccccccccceeeeecCCcccccCCCCEEEEEeCccCCCCCccceeeEEeeeehH
Confidence 555554 35999999987522 345555432 2356799999999975422 112222222211
Q ss_pred cCccCCCCCCccceEEEEc-----ccCCCCCccceeeec--CCC--EEEEEEEEeecC--CCeEEEEeHHHHHHHHHHHH
Q 013444 263 RKSSDLGLGGMRREYLQTD-----CAINAGNSGGPLVNI--DGE--IVGINIMKVAAA--DGLSFAVPIDSAAKIIEQFK 331 (443)
Q Consensus 263 ~~~~~~~~~~~~~~~i~~d-----~~i~~G~SGGPlvd~--~G~--VVGI~s~~~~~~--~g~~~aIPi~~i~~~l~~l~ 331 (443)
.=...+........+|... ...|.|+|||||+-. +|+ |+||++++..=. ..-+.+.-+...+++|++..
T Consensus 476 ~C~~~~~~~~~~~~~iCAg~~~g~~d~C~GDSGGPLv~~~~~~~~~lvGIvS~G~~C~~~~~PgVYTrVs~y~~WI~~~i 555 (565)
T 2xrc_A 476 NCSKFYGNRFYEKEMECAGTYDGSIDACKGDSGGPLVCMDANNVTYVWGVVSWGENCGKPEFPGVYTKVANYFDWISYHV 555 (565)
T ss_dssp CTHHHHTTSCCTTTEEEEEEC----------CCCEEEEECTTCCEEEEEEECC------CCCCEEEEEGGGGHHHHHHHC
T ss_pred HhHHhhccCcCCCceEEeCCCCCCCccCCCccccceEEEeCCCcEEEEEEEeeCCCCCCCCCCEEEEEHHHHHHHHHHHh
Confidence 1000000000111234332 357899999999943 454 899999975311 12345566777777776654
No 153
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=99.03 E-value=3.3e-10 Score=91.48 Aligned_cols=81 Identities=17% Similarity=0.293 Sum_probs=61.7
Q ss_pred eeecCceeecccHHHHHHhhcCCCCCCCCCCceEEeEECCCCccccCCCCCCCEEEEECCEeeCCHHHHHHHHh-cCCCC
Q 013444 338 RPWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEIIEIMG-DRVGE 416 (443)
Q Consensus 338 rp~lGi~~~~~~~~~~~~l~~~~~~~~~~~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s~~dl~~~l~-~~~g~ 416 (443)
..+|||.+..-... ..+.+...|++|..|.++|||+++||++||+|++|||++|.++.++...+. ...++
T Consensus 13 ~~glG~~i~~g~~~---------~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~ 83 (97)
T 2w4f_A 13 TGGLGISIAGGKGS---------TPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEALRGAGT 83 (97)
T ss_dssp TTBSSEEEEECTTS---------CCSBTTBCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTSCS
T ss_pred CCceeEEEECCccC---------CcccCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHhCCCC
Confidence 46888887542110 111123579999999999999999999999999999999999877654332 24789
Q ss_pred eEEEEEEECCCe
Q 013444 417 PLKVVVQRANDQ 428 (443)
Q Consensus 417 ~v~l~v~R~~g~ 428 (443)
++.|+|.| +++
T Consensus 84 ~v~l~v~R-~g~ 94 (97)
T 2w4f_A 84 AVQMRVWR-ERE 94 (97)
T ss_dssp EEEEEEEC-CSS
T ss_pred eEEEEEEe-CCc
Confidence 99999999 654
No 154
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=99.02 E-value=6e-10 Score=88.69 Aligned_cols=58 Identities=26% Similarity=0.540 Sum_probs=53.4
Q ss_pred CCceEEeEECCCCccccCCCCCCCEEEEECCEeeCCH--HHHHHHHhcCCCCeEEEEEEEC
Q 013444 367 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSI--TEIIEIMGDRVGEPLKVVVQRA 425 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s~--~dl~~~l~~~~g~~v~l~v~R~ 425 (443)
..|++|..|.++|||+++||++||+|++|||+++.++ +++.+++... ++++.|+|.|.
T Consensus 27 ~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~-~~~v~l~v~r~ 86 (90)
T 2he4_A 27 RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAR-EDEARLLVVGP 86 (90)
T ss_dssp SSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTSCHHHHHHHHTTS-SSEEEEEEECC
T ss_pred CCCEEEEEECCCChHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCcEEEEEEcc
Confidence 3589999999999999999999999999999999998 8999988776 88999999993
No 155
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=99.01 E-value=4.8e-10 Score=99.82 Aligned_cols=81 Identities=21% Similarity=0.398 Sum_probs=67.0
Q ss_pred eeeecCceeecccHHHHHHhhcCCCCCCCCCCceEEeEECCCCccccCCCCCCCEEEEECCEeeCCHHH-HH-HHHhcCC
Q 013444 337 VRPWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITE-II-EIMGDRV 414 (443)
Q Consensus 337 ~rp~lGi~~~~~~~~~~~~l~~~~~~~~~~~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s~~d-l~-~~l~~~~ 414 (443)
.++|||+.+... ..|++|..|.++|||+++||++||+|++|||+++.++.+ +. .++....
T Consensus 14 ~~~~lG~~~~~~------------------~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~~ 75 (166)
T 1w9e_A 14 QDGKIGLRLKSI------------------DNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQAF 75 (166)
T ss_dssp TTSCCSEEEEEE------------------TTEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHHCC
T ss_pred CCCcEeEEEEeC------------------CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcCC
Confidence 368999998753 269999999999999999999999999999999999987 55 4445577
Q ss_pred CCeEEEEEEECCCeEEEEEEEe
Q 013444 415 GEPLKVVVQRANDQLVTLTVIP 436 (443)
Q Consensus 415 g~~v~l~v~R~~g~~~~l~v~~ 436 (443)
++++.|+|.| +++.++++++.
T Consensus 76 ~~~v~l~vr~-~~~~~~v~l~~ 96 (166)
T 1w9e_A 76 GEKITMTIRD-RPFERTITMHK 96 (166)
T ss_dssp SSEEEEEEEC-CTTCEEEEEEC
T ss_pred CCEEEEEEEc-CCCcEEEEEec
Confidence 8899999944 44777777764
No 156
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.00 E-value=3e-10 Score=93.03 Aligned_cols=60 Identities=23% Similarity=0.381 Sum_probs=55.5
Q ss_pred CceEEeEECCCCccccCCCCCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEECCCeE
Q 013444 368 SGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQL 429 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R~~g~~ 429 (443)
.+++|..|.++|||+++||++||+|++|||++|.+ ++++.+++... ++++.|+|.| +++.
T Consensus 29 ~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~R-~g~~ 90 (103)
T 1v5l_A 29 QPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAA-SYQLCLKIDR-AETR 90 (103)
T ss_dssp EEEECSCBCTTSTTGGGTCCTTCBEEEETTEECSSCCHHHHHHHHTTC-CSEEECEECC-CTTT
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEEE-CCeE
Confidence 58999999999999999999999999999999999 99999999877 8999999999 6654
No 157
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=98.99 E-value=3.8e-10 Score=91.36 Aligned_cols=60 Identities=22% Similarity=0.416 Sum_probs=54.7
Q ss_pred CceEEeEECCCCccccCCCCCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEECCCe
Q 013444 368 SGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQ 428 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R~~g~ 428 (443)
.|++|..|.++|||+++||++||+|++|||+++.+ ++++.+++....++.+.++|.| +++
T Consensus 33 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~l~v~R-~g~ 94 (98)
T 2jxo_A 33 PGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLLVVDR-ETD 94 (98)
T ss_dssp SCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEECCH-HHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEEC-Cch
Confidence 59999999999999999999999999999999999 9999999988777778899988 543
No 158
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=98.98 E-value=9.2e-10 Score=87.19 Aligned_cols=59 Identities=22% Similarity=0.281 Sum_probs=52.8
Q ss_pred CCceEEeEECCCCccccCCCCCCCEEEEECCEeeCCH--HHHHHHHhcCCCCeEEEEEEECCC
Q 013444 367 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSI--TEIIEIMGDRVGEPLKVVVQRAND 427 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s~--~dl~~~l~~~~g~~v~l~v~R~~g 427 (443)
..+++|.+|.++|||+++||++||+|++|||+++.++ .++..++... ++++.|+|.| ++
T Consensus 26 ~~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~-g~~v~l~v~R-~g 86 (88)
T 2uzc_A 26 NMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQGMTHLEAQNKIKGC-TGSLNMTLQR-ES 86 (88)
T ss_dssp TEEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTC-CSEEEEEEEC-CC
T ss_pred CCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEEe-CC
Confidence 3589999999999999999999999999999999988 7888777655 8899999999 54
No 159
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=98.97 E-value=4.7e-10 Score=90.56 Aligned_cols=60 Identities=23% Similarity=0.470 Sum_probs=55.5
Q ss_pred CCceEEeEECCCCccccCC-CCCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEECCCe
Q 013444 367 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQ 428 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R~~g~ 428 (443)
..|++|..|.++|||+++| |++||+|++|||+++.+ ++++.+++.. .++++.|+|.| +++
T Consensus 31 ~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~R-~~~ 93 (97)
T 2jil_A 31 SRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQ-CGQEAALLIEY-DVS 93 (97)
T ss_dssp CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHH-SCSEEEEEEEE-ECC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEe-CCC
Confidence 4699999999999999999 99999999999999999 9999998887 88999999999 554
No 160
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.97 E-value=3.8e-10 Score=104.50 Aligned_cols=88 Identities=23% Similarity=0.292 Sum_probs=74.2
Q ss_pred eeecCceeecccHHHHHHhhcCCCCCCCCCCceEEeEECCCCccccCCCCC-CCEEEEECCEeeCCHHHHHHHHhcCCCC
Q 013444 338 RPWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAGFLP-SDVVIKFDGKPVQSITEIIEIMGDRVGE 416 (443)
Q Consensus 338 rp~lGi~~~~~~~~~~~~l~~~~~~~~~~~~g~~V~~v~~~spA~~aGl~~-GDiI~~vng~~V~s~~dl~~~l~~~~g~ 416 (443)
+++||+.+..+++.... ..|++|.+|.++|||+++||++ ||+|++|||+ |.+++++.+++....|+
T Consensus 94 ~~~lGi~~~~~~~~~~~------------~~Gv~V~~V~~~spA~~aGl~~~GD~I~~ing~-v~~~~~l~~~l~~~~g~ 160 (209)
T 3rle_A 94 QGLLGVSIRFCSFDGAN------------ENVWHVLEVESNSPAALAGLRPHSDYIIGADTV-MNESEDLFSLIETHEAK 160 (209)
T ss_dssp SSSSCEEEEEEECTTGG------------GSCEEEEEECTTSHHHHHTCCTTTEEEEEESSC-CCSSSCHHHHHHHTTTS
T ss_pred cCccceEEeecChhHcc------------ccceEEEEeCCCChHHHCCCCCCCCEEEECCCE-eCCHHHHHHHHHhCCCC
Confidence 57899998877653211 2699999999999999999999 9999999998 99999999999887899
Q ss_pred eEEEEEEECCC-eEEEEEEEecC
Q 013444 417 PLKVVVQRAND-QLVTLTVIPEE 438 (443)
Q Consensus 417 ~v~l~v~R~~g-~~~~l~v~~~~ 438 (443)
++.|+|.|.++ +..++++++..
T Consensus 161 ~v~l~v~r~~~~~~~~v~l~p~~ 183 (209)
T 3rle_A 161 PLKLYVYNTDTDNCREVIITPNS 183 (209)
T ss_dssp CEEEEEEETTTTEEEEEEECCCT
T ss_pred eEEEEEEECCceEEEEEEEEecC
Confidence 99999999444 55788888763
No 161
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=98.97 E-value=9.5e-10 Score=93.26 Aligned_cols=60 Identities=23% Similarity=0.410 Sum_probs=54.9
Q ss_pred CceEEeEECCCCccccCCCCCCCEEEEECCEeeCCH--HHHHHHHhc-CCCCeEEEEEEECCCe
Q 013444 368 SGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSI--TEIIEIMGD-RVGEPLKVVVQRANDQ 428 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s~--~dl~~~l~~-~~g~~v~l~v~R~~g~ 428 (443)
.|++|..|.++|||+++||++||+|++|||++|.++ +++..++.. ..|+++.|+|.| +++
T Consensus 51 ~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R-~~~ 113 (124)
T 3tsv_A 51 VGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQK-KKD 113 (124)
T ss_dssp SCEEEEEECTTCHHHHTTCCTTEEEEEETTEECSSCCHHHHHHHHHHSCTTCEEEEEEEE-CHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEE-CCc
Confidence 699999999999999999999999999999999998 899887765 788999999999 543
No 162
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.97 E-value=2.3e-10 Score=93.64 Aligned_cols=70 Identities=19% Similarity=0.219 Sum_probs=59.0
Q ss_pred CCceEEeEECCCCccccCCCCCCCEEEEECCEeeCCH--HHHHHHHhcCCCCeEEEEEEECCCeEEEEEEEecC
Q 013444 367 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSI--TEIIEIMGDRVGEPLKVVVQRANDQLVTLTVIPEE 438 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s~--~dl~~~l~~~~g~~v~l~v~R~~g~~~~l~v~~~~ 438 (443)
..+++|.+|.++|||+++||++||+|++|||+++.++ .++..++... ++++.|+|.| +++..++++++..
T Consensus 28 ~~~v~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~~-g~~v~l~v~R-~g~~~~~~v~p~~ 99 (103)
T 1wf7_A 28 NMPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIKAC-TGSLNMTLQR-ASAAAKSEPVSSG 99 (103)
T ss_dssp TEEEEECCCCTTCHHHHTTCCTTCBEEEETTEECSSCCHHHHHHHHHHC-SSEEEEEECC-CSCCCCCCCCCCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEe-CCCcCCCCCCCCC
Confidence 3578999999999999999999999999999999886 6666666554 7889999999 7877777777654
No 163
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.95 E-value=5.6e-10 Score=94.91 Aligned_cols=69 Identities=16% Similarity=0.324 Sum_probs=62.3
Q ss_pred CceEEeEECCCCccccCCC-CCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEECCCeEEEEEEEec
Q 013444 368 SGVLVPVVTPGSPAHLAGF-LPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQLVTLTVIPE 437 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aGl-~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R~~g~~~~l~v~~~ 437 (443)
.+++|..|.++|||+++|| ++||+|++|||+++.+ ++++.+++....|+.+.|+|.| +++..++++++.
T Consensus 33 ~~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~R-~g~~~~~~~~~~ 104 (127)
T 1b8q_A 33 PPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLILR-GPEGFTTHLETT 104 (127)
T ss_dssp SCEEECCCSSSSSHHHHSSCCTTTCCCEETTEECSSSCHHHHHHHHHSCCSSCEEEEEEC-CCCSEEECCCCC
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEe-CCceEEEEEEEE
Confidence 5899999999999999999 9999999999999999 9999999988788999999999 777777766653
No 164
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.95 E-value=2.7e-10 Score=95.84 Aligned_cols=63 Identities=19% Similarity=0.393 Sum_probs=57.4
Q ss_pred CCceEEeEECC--CCccccCCCCCCCEEEEECCEeeCCH--HHHHHHHhcCCCCeEEEEEEECCCeEEE
Q 013444 367 KSGVLVPVVTP--GSPAHLAGFLPSDVVIKFDGKPVQSI--TEIIEIMGDRVGEPLKVVVQRANDQLVT 431 (443)
Q Consensus 367 ~~g~~V~~v~~--~spA~~aGl~~GDiI~~vng~~V~s~--~dl~~~l~~~~g~~v~l~v~R~~g~~~~ 431 (443)
..|++|..|.+ ++||+++||++||+|++|||++|.+| +++.+++... ++++.|+|.| +++..+
T Consensus 43 ~~gv~V~~V~~~~~spA~~aGL~~GD~Il~Vng~~v~~~~~~dl~~~l~~~-g~~v~l~v~R-~g~~~~ 109 (118)
T 2yub_A 43 ATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEEVEDAIKQT-SQTLQLLIEH-DPVPQR 109 (118)
T ss_dssp CCEEEEEECCTTTSCTTHHHHCCTTCCEEEESSSBTTTSCHHHHHHHHHCC-SSCEEEEEEE-CSSCCC
T ss_pred CCcEEEEEecCCCCChHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHHhC-CCEEEEEEEE-CCEEEe
Confidence 47999999999 99999999999999999999999999 9999999877 8899999999 666543
No 165
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.95 E-value=1.7e-09 Score=88.54 Aligned_cols=69 Identities=23% Similarity=0.368 Sum_probs=59.8
Q ss_pred eecCceeecccHHHHHHhhcCCCCCCCCCCceEEeEECCCCccccCCCCCCCEEEEECCEeeCC--HHHHHHHHhcCCCC
Q 013444 339 PWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGE 416 (443)
Q Consensus 339 p~lGi~~~~~~~~~~~~l~~~~~~~~~~~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~ 416 (443)
.++||.+..-. ....|++|..|.++|||+++||++||+|++|||++|.+ ++++.+++.. ++
T Consensus 27 ~~lG~~~~~~~---------------~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~--~~ 89 (104)
T 1wi2_A 27 AQLGFNIRGGK---------------ASQLGIFISKVIPDSDAHRAGLQEGDQVLAVNDVDFQDIEHSKAVEILKT--AR 89 (104)
T ss_dssp CCCSEEEECCS---------------SSCCCCEEEEECTTSHHHHHTCCTTCEEEEETTEECSSCCHHHHHHHHHH--SS
T ss_pred CCccEEEEccc---------------CCCCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhC--CC
Confidence 57888876421 12368999999999999999999999999999999998 9999998877 78
Q ss_pred eEEEEEEE
Q 013444 417 PLKVVVQR 424 (443)
Q Consensus 417 ~v~l~v~R 424 (443)
++.|+|.|
T Consensus 90 ~v~l~v~r 97 (104)
T 1wi2_A 90 EISMRVRF 97 (104)
T ss_dssp SEEEEEEC
T ss_pred EEEEEEEE
Confidence 89999998
No 166
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=98.94 E-value=3.2e-09 Score=90.09 Aligned_cols=65 Identities=26% Similarity=0.436 Sum_probs=57.5
Q ss_pred CCceEEeEECCCCccccCCCCCCCEEEEECCEeeCCHHHHHHHHhc-CCCCeEEEEEEECCCeEEEEEEE
Q 013444 367 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEIIEIMGD-RVGEPLKVVVQRANDQLVTLTVI 435 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s~~dl~~~l~~-~~g~~v~l~v~R~~g~~~~l~v~ 435 (443)
..|++|..|.++|||+++ |++||+|++|||++|.+|+++..++.. ..|+++.|+| | +|+ .++++.
T Consensus 24 ~~gv~V~~V~~~spA~~a-L~~GD~Il~InG~~v~~~~dl~~~l~~~~~g~~v~l~V-R-~g~-~~v~l~ 89 (125)
T 2hga_A 24 PDGVQIDSVVPGSPASKV-LTPGLVIESINGMPTSNLTTYSAALKTISVGEVINITT-D-QGT-FHLKTG 89 (125)
T ss_dssp CCCEEEEEECSSSGGGGT-SCTTCEEEEETTEECSSHHHHHHHHTTCCTTCEEEEEE-T-TEE-EEEECC
T ss_pred CCceEEEEECCCChHHHh-cCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEE-E-CCE-EEEEEe
Confidence 469999999999999999 999999999999999999999998885 7789999999 9 776 444443
No 167
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=98.94 E-value=2.1e-09 Score=85.38 Aligned_cols=56 Identities=13% Similarity=0.286 Sum_probs=52.5
Q ss_pred CceEEeEECCCCcccc-CCCCCCCEEEEECCEeeC--CHHHHHHHHhcCCCCeEEEEEEE
Q 013444 368 SGVLVPVVTPGSPAHL-AGFLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPLKVVVQR 424 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~-aGl~~GDiI~~vng~~V~--s~~dl~~~l~~~~g~~v~l~v~R 424 (443)
.+++|..|.++|||++ +||++||+|++|||+++. +++++.+++....+ ++.|+|.|
T Consensus 25 ~~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~-~v~l~v~r 83 (88)
T 1kwa_A 25 NHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRG-SITFKIVP 83 (88)
T ss_dssp GGEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHHHHHHHHCCE-EEEEEEEC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCC-cEEEEEEC
Confidence 5799999999999999 899999999999999999 99999999988766 89999998
No 168
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.94 E-value=6e-10 Score=90.91 Aligned_cols=62 Identities=26% Similarity=0.531 Sum_probs=53.8
Q ss_pred CCceEEeEECCCCccccCCCCCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEECCCeE
Q 013444 367 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQL 429 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R~~g~~ 429 (443)
..|++|..|.++|||+++||++||+|++|||++|.+ ++++..++.. .++++.|+|.|.+++.
T Consensus 29 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~r~~~~~ 92 (102)
T 2d90_A 29 QKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRK-GGDQTTLLVLDKEAES 92 (102)
T ss_dssp SSSEEEECCCTTSTTTTTTCCTTCEEEEESSCBCTTSCHHHHHHHHHH-STTEEEEEECSTTCCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCEEEEEEEECCCce
Confidence 369999999999999999999999999999999988 5788887766 4789999999844443
No 169
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=98.94 E-value=2.4e-09 Score=84.77 Aligned_cols=57 Identities=23% Similarity=0.496 Sum_probs=49.0
Q ss_pred CceEEeEECCCCccccCCCCCCCEEEEECCEeeCCH--HHHHHHHhc-CCCCeEEEEEEECCC
Q 013444 368 SGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSI--TEIIEIMGD-RVGEPLKVVVQRAND 427 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s~--~dl~~~l~~-~~g~~v~l~v~R~~g 427 (443)
.|++|..+ ++|||+ +||++||+|++|||+++.++ +++.+++.. ..|+++.|+|.| ++
T Consensus 27 ~~~~v~~v-~~spA~-aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R-~g 86 (88)
T 3bpu_A 27 GGQRVKQI-VDSPRS-RGLKEGDLIVEVNKKNVQALTHNQVVDMLVESPKGSEVTLLVQR-QT 86 (88)
T ss_dssp SSEEEEEC-CC--CC-TTCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCEEEEEEEE-EC
T ss_pred CcEEEEEe-cCChhH-hCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCCCEEEEEEEe-CC
Confidence 58888887 999999 99999999999999999987 889888875 678999999999 54
No 170
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.94 E-value=4.1e-10 Score=90.53 Aligned_cols=61 Identities=20% Similarity=0.422 Sum_probs=54.5
Q ss_pred CCceEEeEECCCCccccCCCCCCCEEEEECCEeeCCH--HHHHHHHhcCCCCeEEEEEEECCCeE
Q 013444 367 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSI--TEIIEIMGDRVGEPLKVVVQRANDQL 429 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s~--~dl~~~l~~~~g~~v~l~v~R~~g~~ 429 (443)
..|++|.+|.++|||+++||++||+|++|||+++.++ .++.+++.... +++.|+|.| +++.
T Consensus 29 ~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~R-~g~~ 91 (94)
T 1vb7_A 29 HTPIIVTKVTERGKAEAADLRPGDIIVAINGQSAENMLHAEAQSKIRQSA-SPLRLQLDR-SSGP 91 (94)
T ss_dssp TEEEECCCBCTTSSHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTCC-SSEEEEEEC-CCCC
T ss_pred CCCeEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CcEEEEEEE-CCcC
Confidence 3589999999999999999999999999999999987 89998887754 889999999 6553
No 171
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=98.94 E-value=3.4e-10 Score=94.83 Aligned_cols=96 Identities=20% Similarity=0.388 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHHcCcee-----e---eecCceeecccHHHHHHhhcCCCCCCCCCCceEEeEECCCCccccCC-CCCCC
Q 013444 320 IDSAAKIIEQFKKNGRVV-----R---PWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAG-FLPSD 390 (443)
Q Consensus 320 i~~i~~~l~~l~~~g~v~-----r---p~lGi~~~~~~~~~~~~l~~~~~~~~~~~~g~~V~~v~~~spA~~aG-l~~GD 390 (443)
.+.+...+..+.....+. + ..|||.+...... .....|++|.+|.++|||+++| |++||
T Consensus 5 ~~~~~~~~~~~~~~~~~~~v~l~k~~~~~lG~~i~~~~~~------------~~~~~gv~V~~V~~~spA~~aG~l~~GD 72 (117)
T 2o2t_A 5 CDEFDQLIKNMAQGRHVEVFELLKPPSGGLGFSVVGLRSE------------NRGELGIFVQEIQEGSVAHRDGRLKETD 72 (117)
T ss_dssp CHHHHHHHHHHHTTSCEEEEEEECCSSSCSSCCEEEEECC------------C--CEEEEECCCCTTSHHHHHCCCCTTC
T ss_pred hHHHHHHHHhhccCCeEEEEEEEECCCCCCCEEEeecccC------------CCCCCCEEEEEECCCCHHHHCCCCCCCC
Confidence 345666666666554432 1 3477776543210 0123699999999999999999 99999
Q ss_pred EEEEECCEeeC---CHHHHHHHHhcCCCCeEEEEEEECCCeE
Q 013444 391 VVIKFDGKPVQ---SITEIIEIMGDRVGEPLKVVVQRANDQL 429 (443)
Q Consensus 391 iI~~vng~~V~---s~~dl~~~l~~~~g~~v~l~v~R~~g~~ 429 (443)
+|++|||+++. ++.++..++.. .++++.|+|.| +++.
T Consensus 73 ~Il~ing~~v~~~~~~~~~~~~l~~-~~~~v~l~v~R-~~~~ 112 (117)
T 2o2t_A 73 QILAINGQALDQTITHQQAISILQK-AKDTVQLVIAR-GSLP 112 (117)
T ss_dssp EEEEETTEECCTTSCHHHHHHHHHH-CCSEEEEEEES-SCCG
T ss_pred EEEEECCEECCCCCCHHHHHHHHHc-CCCEEEEEEEe-CCcc
Confidence 99999999998 89999988876 57899999999 5543
No 172
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=98.93 E-value=2e-09 Score=85.45 Aligned_cols=60 Identities=25% Similarity=0.314 Sum_probs=52.2
Q ss_pred CCceEEeEECCCCccccCCCCCCCEEEEECCEeeC--CHHHHHHHHhcCCCCeEEEEEEECCCe
Q 013444 367 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPLKVVVQRANDQ 428 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~--s~~dl~~~l~~~~g~~v~l~v~R~~g~ 428 (443)
..|++|..|.++|||+++||++||+|++|||+++. ++.++..++... ++++.|+|.| +++
T Consensus 26 ~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~-g~~v~l~v~R-~~~ 87 (89)
T 2q3g_A 26 NVPLSISRLTPGGKAAQAGVAVGDWVLSIDGENAGSLTHIEAQNKIRAC-GERLSLGLSR-AIT 87 (89)
T ss_dssp TEEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHHHHTC-TTEEEEEEEE-ECC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCEEEEEEEe-CCC
Confidence 35899999999999999999999999999999998 568887777654 7889999999 443
No 173
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=98.93 E-value=1.3e-09 Score=88.42 Aligned_cols=57 Identities=23% Similarity=0.389 Sum_probs=52.5
Q ss_pred CceEEeEECCCCccccCCCCCCCEEEEECCEeeC--CHHHHHHHHhcCCCCeEEEEEEEC
Q 013444 368 SGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPLKVVVQRA 425 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~--s~~dl~~~l~~~~g~~v~l~v~R~ 425 (443)
.|++|..|.++|||+++||++||+|++|||+++. ++.++..++. ..|+.+.|++.|.
T Consensus 34 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~-~~g~~v~l~v~r~ 92 (99)
T 3khf_A 34 VHHVVWSVEDGSPAQEAGLRAGDLITHINGESVLGLVHMDVVELLL-KSGNKISLRTTAL 92 (99)
T ss_dssp EEEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHH-HSCSEEEEEEECS
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHh-cCCCEEEEEEEEC
Confidence 4789999999999999999999999999999999 8999988887 5688999999993
No 174
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=98.93 E-value=1.2e-09 Score=88.32 Aligned_cols=59 Identities=25% Similarity=0.569 Sum_probs=53.0
Q ss_pred CCceEEeEECCCCccccCC-CCCCCEEEEECCEeeCCH--HHHHHHHhcCCCCeEEEEEEECCC
Q 013444 367 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQSI--TEIIEIMGDRVGEPLKVVVQRAND 427 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s~--~dl~~~l~~~~g~~v~l~v~R~~g 427 (443)
..|++|..|.++|||+++| |++||+|++|||+++.++ .++..++.. .++++.|+|.| ++
T Consensus 36 ~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~R-~g 97 (98)
T 1ihj_A 36 TTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKE-ADFKIELEIQT-FD 97 (98)
T ss_dssp EEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHHHH-SCSEEEEEEEE-C-
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc-CCCeEEEEEEe-CC
Confidence 4599999999999999999 999999999999999986 788888876 78899999999 55
No 175
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.93 E-value=1.8e-09 Score=89.23 Aligned_cols=62 Identities=21% Similarity=0.370 Sum_probs=52.0
Q ss_pred CCCceEEeEECCCCccccCCCCCCCEEEEECCEeeCCHHH--HHHHHhcCCCCeEEEEEEECCCeE
Q 013444 366 VKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITE--IIEIMGDRVGEPLKVVVQRANDQL 429 (443)
Q Consensus 366 ~~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s~~d--l~~~l~~~~g~~v~l~v~R~~g~~ 429 (443)
...|++|..|.++|||+++||++||+|++|||++|.+..+ +...+.. .++++.|+|.| +++.
T Consensus 44 ~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~-~g~~v~l~v~R-~g~~ 107 (110)
T 1x5q_A 44 DDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEALRG-AGTAVQMRVWR-ESGP 107 (110)
T ss_dssp TCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHS-CCSEEEEEEEE-CSSC
T ss_pred CCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHhhC-CCCeEEEEEEE-CCcc
Confidence 3579999999999999999999999999999999998544 3444444 78999999999 6653
No 176
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=98.93 E-value=1.9e-09 Score=114.65 Aligned_cols=72 Identities=24% Similarity=0.281 Sum_probs=65.4
Q ss_pred CceEEeEECCCCccccCCCCCCCEEEEECCEeeCCHHHHHHHHhc-CCCCeEEEEEEECCCeEEEEEEEecCCCC
Q 013444 368 SGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEIIEIMGD-RVGEPLKVVVQRANDQLVTLTVIPEEANP 441 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s~~dl~~~l~~-~~g~~v~l~v~R~~g~~~~l~v~~~~~~~ 441 (443)
.|++|.+|.++|||+++||++||+|++|||++| ++.++.+++.. +.|++++|+|.| +|+.+++++++.+.+.
T Consensus 496 ~gv~V~~V~~~spA~~AGL~~GD~I~aInG~~v-~~~~l~~~l~~~~~g~~v~l~v~R-~g~~~~~~v~l~~~~~ 568 (597)
T 4fgm_A 496 QGLDVLNVYHDESAYHAGLSAGDKIIAIDHLQA-TEQSVKRILERYIPGDTVTIHAFR-RDELMTLELTWQEPAK 568 (597)
T ss_dssp TEEEEEEECTTSHHHHHTCCTTCEEEEETTEEC-CTTTHHHHHTTCCTTCEEEEEEEE-TTEEEEEEEECCCCCC
T ss_pred CeEEEEEeCCCChHHHCCCCCCCEEEEECCEEC-CHHHHHHHHHhcCCCCEEEEEEEE-CCEEEEEEEEecCCCC
Confidence 579999999999999999999999999999999 58899998876 789999999999 8999999999876543
No 177
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=98.92 E-value=3.2e-09 Score=85.71 Aligned_cols=59 Identities=15% Similarity=0.409 Sum_probs=53.0
Q ss_pred CceEEeEECCCCccccCC-CCCCCEEEEECCEeeC--CHHHHHHHHhcCCCCeEEEEEEECCCe
Q 013444 368 SGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPLKVVVQRANDQ 428 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~--s~~dl~~~l~~~~g~~v~l~v~R~~g~ 428 (443)
.|++|..|.++|||+++| |++||+|++|||+++. +++++..++. ..++++.|+|.| +++
T Consensus 30 ~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~-~~g~~v~l~v~R-~~~ 91 (97)
T 1n7e_A 30 DPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQ-MAGETVTLKIKK-QTD 91 (97)
T ss_dssp SCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHH-TCCSEEEEEEEC-CCC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH-cCCCeEEEEEEe-CCC
Confidence 689999999999999999 9999999999999997 4688888887 578899999999 554
No 178
>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human complement system, glycoprotein, SP, VWFA,; HET: NAG; 1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A*
Probab=98.92 E-value=1.2e-09 Score=114.15 Aligned_cols=187 Identities=17% Similarity=0.130 Sum_probs=102.7
Q ss_pred HHhCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCC-----CcEEEEEEEee
Q 013444 132 ARVCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQD-----GRTFEGTVLNA 206 (443)
Q Consensus 132 ~~~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~d-----g~~~~a~vv~~ 206 (443)
..-.|..|.|... +...|.|.+|+++ ||||+|||+.+... ...+.|.+.. ++.+..+-+..
T Consensus 232 ~~~~Pw~v~l~~~--------~~~~CgGsLIs~~-~VLTAAHC~~~~~~-----~~~~~V~~G~~~~~~~~~~~v~~i~~ 297 (509)
T 2odp_A 232 QERTPWHVTIKPK--------SQETCRGALISDQ-WVLTAAHCFRDGND-----HSLWRVNVGDPKSQWGKEFLIEKAVI 297 (509)
T ss_dssp HHHCTTEEEEEC------------CEEEEECSSS-EEEECGGGC-------------CEEEECCTTCTTCEEECEEEEEE
T ss_pred cCCCCcEEEEEeC--------CCcEEEEEEEcCC-EEEEcHHHcCCCCC-----cceEEEEeCCcccCCCceeeeEEEEE
Confidence 3457888888641 1256999999988 99999999975210 1244555543 34555555555
Q ss_pred cC----------------CCCEEEEEEcCCC----CCCccccCCCC------CCCCCCEEEEEecCCCCCCce-------
Q 013444 207 DF----------------HSDIAIVKINSKT----PLPAAKLGTSS------KLCPGDWVVAMGCPHSLQNTV------- 253 (443)
Q Consensus 207 d~----------------~~DlAlLkl~~~~----~~~~~~l~~s~------~~~~G~~V~~iG~p~~~~~~~------- 253 (443)
|+ .+|||||+++.+. .+.|+.|.... ....|..+.+.||........
T Consensus 298 Hp~y~~~~~~~~~~~~~~~nDIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~g~~~~~~g~g~~~~~~~~~~~~~l 377 (509)
T 2odp_A 298 SPGFDVFAKKNQGILEFYGDDIALLKLAQKVKMSTHARPICLPCTMEANLALRRPQGSTCRDHENELLNKQSVPAHFVAL 377 (509)
T ss_dssp CTTCCTTTTGGGTCCCCCTTCCEEEEESSCCCCBTTBCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCSSEEEEEEECT
T ss_pred CCCCccccccccccccccCCCeEEEEECCcccCCCCcccccCCCCcccchhhccCCCCccccccccccccccceeeeecc
Confidence 43 3699999998763 34577775422 134566666666542211111
Q ss_pred -----EEEEEEeeecCccCC-------CC-------CCccceEEEEc----ccCCCCCccceeeecC-C--CEEEEEEEE
Q 013444 254 -----TAGIVSCVDRKSSDL-------GL-------GGMRREYLQTD----CAINAGNSGGPLVNID-G--EIVGINIMK 307 (443)
Q Consensus 254 -----t~G~Vs~~~~~~~~~-------~~-------~~~~~~~i~~d----~~i~~G~SGGPlvd~~-G--~VVGI~s~~ 307 (443)
..-++..+....|.. .+ ......+|+.. ...|.|+|||||+-.+ | .++||++|+
T Consensus 378 ~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~iCag~~~~~~~C~GDSGGPL~~~~~~~~~l~GIvS~G 457 (509)
T 2odp_A 378 NGSKLNINLKMGVEWTSCAEVVSQEKTMFPNLTDVREVVTDQFLCSGTQEDESPCKGESGGAVFLERRFRFFQVGLVSWG 457 (509)
T ss_dssp TSCEEEEEEECTHHHHHHHHGGGGCTTTCTTCSSGGGTSCTTEEEECCTTCCCCCGGGTTCEEEEEETTEEEEEEEEEEE
T ss_pred cCceeeEEEecCccHHHHHHHhhcccccccccccccccccCCEEEeCCCCCCcccCCCccCceEEEECCeEEEEEEEEEc
Confidence 111111011111110 01 01223456553 3579999999999543 3 499999998
Q ss_pred ee-cCC--------------Ce----EEEEeHHHHHHHHHHHHH
Q 013444 308 VA-AAD--------------GL----SFAVPIDSAAKIIEQFKK 332 (443)
Q Consensus 308 ~~-~~~--------------g~----~~aIPi~~i~~~l~~l~~ 332 (443)
.. ... +. +++.-+....++|++..+
T Consensus 458 ~~~~C~~~~~~~~~~~~~~Pg~~y~~~vyt~V~~~~~WI~~~~~ 501 (509)
T 2odp_A 458 LYNPCLGSADKNSRKRAPRSKVPPPRDFHINLFRMQPWLRQHLG 501 (509)
T ss_dssp SCCTTC-----CCCCCCCTTCSSCCCEEEEEGGGCHHHHHHHHT
T ss_pred CCCCCCCcccccccccCcccCCCCCCceeeeHHHHhHHHHHHhC
Confidence 63 111 10 355667777888877653
No 179
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=98.92 E-value=3.2e-09 Score=85.76 Aligned_cols=60 Identities=13% Similarity=0.328 Sum_probs=51.8
Q ss_pred CceEEeEECCCCccccCC-CCCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEECCCeE
Q 013444 368 SGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQL 429 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R~~g~~ 429 (443)
.|++|..|.++|||+++| |++||+|++|||+++.+ +.++..++... ++++.|+|.| ++..
T Consensus 30 ~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~~~v~l~v~R-~~~~ 92 (98)
T 2opg_A 30 GAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQT-PQRVRLTLYR-DEAP 92 (98)
T ss_dssp CSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTC-CSEEEEEEEE-CSSC
T ss_pred CCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEEc-CCCC
Confidence 599999999999999999 99999999999999987 56777767654 4789999999 5543
No 180
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.91 E-value=6.9e-10 Score=94.49 Aligned_cols=68 Identities=21% Similarity=0.365 Sum_probs=56.3
Q ss_pred CceEEeEECCCCccccCCCCCCCEEEEECCEeeCCHHH--HHHHHhcCCCCeEEEEEEECCCeEEEEEEEecC
Q 013444 368 SGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITE--IIEIMGDRVGEPLKVVVQRANDQLVTLTVIPEE 438 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s~~d--l~~~l~~~~g~~v~l~v~R~~g~~~~l~v~~~~ 438 (443)
.|++|..|.++|||+++||++||+|++|||++|.++.+ +.+.+. .++++.|+|.| +++..++++++.+
T Consensus 46 ~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~~~--~~~~v~l~v~R-~g~~~~~~v~~~~ 115 (128)
T 1uf1_A 46 LGIYITGVDPGSEAEGSGLKVGDQILEVNGRSFLNILHDEAVRLLK--SSRHLILTVKD-VGRLPHARTTVDE 115 (128)
T ss_dssp CCCEEEEECTTCHHHHHTCCTTCEEEEETTEECSSCCHHHHHHHHT--TCSEEEEEEEC-CSCCSSCSCCCCS
T ss_pred CCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHh--cCCeEEEEEEE-CCccccccccccc
Confidence 58999999999999999999999999999999998644 444443 35799999999 7877776666654
No 181
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.91 E-value=2e-09 Score=86.08 Aligned_cols=68 Identities=13% Similarity=0.279 Sum_probs=59.4
Q ss_pred eeecCceeecccHHHHHHhhcCCCCCCCCCCceEEeEECCCCccccCC-CCCCCEEEEECCEee-CCHHHHHHHHhcCCC
Q 013444 338 RPWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPV-QSITEIIEIMGDRVG 415 (443)
Q Consensus 338 rp~lGi~~~~~~~~~~~~l~~~~~~~~~~~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V-~s~~dl~~~l~~~~g 415 (443)
..+||+.+..- ..+++|.+|.+++||+++| |++||+|++|||+++ .+++++.+++... +
T Consensus 17 ~~~lG~~i~~~------------------~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v~~~~~~~~~~l~~~-~ 77 (91)
T 2e7k_A 17 GEHLGVTFRVE------------------GGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPVGSDPRALQELLRNA-S 77 (91)
T ss_dssp TCCCCEEEEES------------------SSSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCHHHHHHHHHTC-C
T ss_pred CCcEeEEEEec------------------CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCHHHHHHHHHcC-C
Confidence 35789987641 3589999999999999986 999999999999999 9999999999864 6
Q ss_pred CeEEEEEEE
Q 013444 416 EPLKVVVQR 424 (443)
Q Consensus 416 ~~v~l~v~R 424 (443)
+++.|+|.|
T Consensus 78 ~~v~l~v~~ 86 (91)
T 2e7k_A 78 GSVILKILS 86 (91)
T ss_dssp SSBCEEEEC
T ss_pred CeEEEEEEE
Confidence 789999987
No 182
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=98.90 E-value=3.3e-09 Score=85.48 Aligned_cols=57 Identities=30% Similarity=0.478 Sum_probs=52.0
Q ss_pred CCceEEeEECCCCccccCCCCCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEE
Q 013444 367 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQR 424 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R 424 (443)
..|++|..|.++|||+++||++||+|++|||+++.+ ++++.+++... ++++.|+|.|
T Consensus 36 ~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~-~~~v~l~v~~ 94 (96)
T 2ego_A 36 EMVTFVARVHESSPAQLAGLTPGDTIASVNGLNVEGIRHREIVDIIKAS-GNVLRLETLY 94 (96)
T ss_dssp CEEEEEEEECTTCHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHHT-TTEEEEEEEC
T ss_pred CCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEEE
Confidence 469999999999999999999999999999999998 69999988776 5589999987
No 183
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=98.90 E-value=3e-09 Score=87.24 Aligned_cols=69 Identities=12% Similarity=0.213 Sum_probs=52.6
Q ss_pred CCceEEeEECCCCccccCC-CCCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEECCCeEEEEEEEec
Q 013444 367 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQLVTLTVIPE 437 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R~~g~~~~l~v~~~ 437 (443)
..|++|.+|.++|||+++| |++||+|++|||+++.+ +.++...+... ++.+.|+|.| +++...+.+++.
T Consensus 32 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~~~v~l~v~R-~~~~~~~~~~p~ 103 (105)
T 2awx_A 32 DNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALKNT-SDFVYLKVAK-PTSMYISRHHHH 103 (105)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHSC-CSEEEEEEEC-CCC---------
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEc-CCCCCCcccccc
Confidence 3599999999999999999 99999999999999965 66776766654 7899999999 777777766653
No 184
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=98.89 E-value=4.2e-09 Score=85.79 Aligned_cols=57 Identities=9% Similarity=0.212 Sum_probs=52.7
Q ss_pred CceEEeEECCCCcccc-CCCCCCCEEEEECCEee--CCHHHHHHHHhcC-CCCeEEEEEEE
Q 013444 368 SGVLVPVVTPGSPAHL-AGFLPSDVVIKFDGKPV--QSITEIIEIMGDR-VGEPLKVVVQR 424 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~-aGl~~GDiI~~vng~~V--~s~~dl~~~l~~~-~g~~v~l~v~R 424 (443)
.+++|.+|.+++||++ +||++||+|++|||+++ .+++++.++|... .+++++|+|.|
T Consensus 37 ~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R 97 (101)
T 2yt7_A 37 PTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRETKSQTSVTLSIVH 97 (101)
T ss_dssp CCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHHHTTTSSEEEEEECC
T ss_pred cCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEe
Confidence 4799999999999999 67999999999999999 8999999999874 78899999988
No 185
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.88 E-value=7.3e-09 Score=87.51 Aligned_cols=60 Identities=20% Similarity=0.370 Sum_probs=54.5
Q ss_pred CCceEEeEECCCCccccCC-CCCCCEEEEECCEeeC--CHHHHHHHHhcC-CCCeEEEEEEECCC
Q 013444 367 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQ--SITEIIEIMGDR-VGEPLKVVVQRAND 427 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~--s~~dl~~~l~~~-~g~~v~l~v~R~~g 427 (443)
..|++|..|.+++||+++| |++||+|++|||++|. +++++.++|... .++++.|+|.| ++
T Consensus 43 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R-~~ 106 (123)
T 1ueq_A 43 DEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQSVPIGQSVNLVLCR-GY 106 (123)
T ss_dssp SCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCEEEEEEEE-SC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEe-CC
Confidence 4689999999999999999 9999999999999998 788999999875 58999999999 44
No 186
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=98.88 E-value=4.6e-09 Score=82.53 Aligned_cols=58 Identities=17% Similarity=0.353 Sum_probs=51.8
Q ss_pred CCceEEeEECCCCccccCC-CCCCCEEEEECCEeeC--CHHHHHHHHhc-CCCCeEEEEEEE
Q 013444 367 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQ--SITEIIEIMGD-RVGEPLKVVVQR 424 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~--s~~dl~~~l~~-~~g~~v~l~v~R 424 (443)
..|++|.+|.++|||+++| |++||+|++|||+++. +++++.+++.. ..|+++.++|.|
T Consensus 24 ~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R 85 (85)
T 2i04_A 24 DEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCR 85 (85)
T ss_dssp TBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCTTCEEEEEEEC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEC
Confidence 3589999999999999999 9999999999999998 56899988877 458899999876
No 187
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=98.88 E-value=4.7e-09 Score=84.34 Aligned_cols=59 Identities=20% Similarity=0.357 Sum_probs=50.6
Q ss_pred CceEEeEECCCCccccCC-CCCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEECCCe
Q 013444 368 SGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQ 428 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R~~g~ 428 (443)
.|++|.+|.++|||+++| |++||+|++|||+++.+ +.++...+.. .++++.|+|.| +++
T Consensus 29 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~-~g~~v~l~v~R-~~~ 90 (95)
T 2vwr_A 29 PGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQA-SGERVNLTIAR-PGK 90 (95)
T ss_dssp CSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHH-CCSEEEEEEEE-ESC
T ss_pred CCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCEEEEEEEc-CCc
Confidence 599999999999999999 99999999999999976 5666665654 48899999999 443
No 188
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=98.87 E-value=3.8e-09 Score=87.48 Aligned_cols=57 Identities=16% Similarity=0.272 Sum_probs=52.0
Q ss_pred CceEEeEECCCCccccCCCCCCCEEEEECCEeeC--CHHHHHHHHhcCCCCeEEEEEEE
Q 013444 368 SGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPLKVVVQR 424 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~--s~~dl~~~l~~~~g~~v~l~v~R 424 (443)
.+++|.+|.++|||+++||++||+|++|||++|. +++++.+++....++++.|+|.|
T Consensus 44 ~~v~V~~V~~gspA~~AGL~~GD~Il~VnG~~v~~~~~~dv~~~i~~~~~~~v~l~V~~ 102 (109)
T 2vsv_A 44 APVQVHFLDPYCSASVAGAREGDYIVSIQLVDCKWLTLSEVMKLLKSFGEDEIEMKVVS 102 (109)
T ss_dssp SSCEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTSCEEEEEES
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEE
Confidence 4788999999999999999999999999999999 66999998887666679999998
No 189
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=98.87 E-value=5.3e-09 Score=83.30 Aligned_cols=60 Identities=25% Similarity=0.470 Sum_probs=49.8
Q ss_pred CceEEeEECCCCccccCCCCCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEECCCe
Q 013444 368 SGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQ 428 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R~~g~ 428 (443)
.|++|..|.++|||+++||++||+|++|||+++.+ +.++..++....++.+.+.+.| +++
T Consensus 27 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~~~~~r-~~~ 88 (91)
T 1g9o_A 27 LGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDP-ETD 88 (91)
T ss_dssp SSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEEECC-CCS
T ss_pred CCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEEEEcC-Ccc
Confidence 59999999999999999999999999999999987 7888888877655545555555 443
No 190
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.87 E-value=3.3e-09 Score=85.16 Aligned_cols=60 Identities=20% Similarity=0.329 Sum_probs=51.6
Q ss_pred CCceEEeEECCCCccccCCCCCCCEEEEECCEeeCCH--HHHHHHHhcCCCCeEEEEEEECCCe
Q 013444 367 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSI--TEIIEIMGDRVGEPLKVVVQRANDQ 428 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s~--~dl~~~l~~~~g~~v~l~v~R~~g~ 428 (443)
..+++|..|.++|||+++||++||+|++|||++|.++ .++...+.. .++++.|+|.| +++
T Consensus 31 ~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~-~g~~v~l~v~R-~g~ 92 (94)
T 2eeg_A 31 SAPLTISRVHAGSKAALAALCPGDLIQAINGESTELMTHLEAQNRIKG-CHDHLTLSVSS-GPS 92 (94)
T ss_dssp TSCCEECCCCSSSHHHHTTCCTTCEEEEETTEETTTCCHHHHHHHHHT-CCSCEEEEEEC-CSS
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEe-CCC
Confidence 4689999999999999999999999999999999985 666666655 67889999999 543
No 191
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=98.87 E-value=1.3e-09 Score=89.43 Aligned_cols=60 Identities=30% Similarity=0.575 Sum_probs=52.8
Q ss_pred CCceEEeEECCCCccccCCCCCCCEEEEECCEeeCCHH--HHHHHHhcCCCCeEEEEEEECCCe
Q 013444 367 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSIT--EIIEIMGDRVGEPLKVVVQRANDQ 428 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s~~--dl~~~l~~~~g~~v~l~v~R~~g~ 428 (443)
..|++|..|.++|||+++||++||+|++|||+++.++. ++..++. ..++++.|+|.| +++
T Consensus 25 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~-~~g~~v~l~v~r-~~~ 86 (106)
T 3ngh_A 25 TDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVR-KSGNSVTLLVLD-GDS 86 (106)
T ss_dssp CCSCEEECCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHH-HTTTEEEEEEEC-HHH
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH-hCCCEEEEEEEE-CCe
Confidence 35899999999999999999999999999999998876 8888777 467899999999 443
No 192
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.86 E-value=1.7e-09 Score=88.11 Aligned_cols=61 Identities=21% Similarity=0.343 Sum_probs=50.8
Q ss_pred CCceEEeEECCCCccccCCCCCCCEEEEECCEeeCCHHHHHHHHhcCCCCeEEEEEEECCCe
Q 013444 367 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEIIEIMGDRVGEPLKVVVQRANDQ 428 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s~~dl~~~l~~~~g~~v~l~v~R~~g~ 428 (443)
..|++|..|.++|||+++||++||+|++|||++|.++.+...+...+.++++.|+|.| +++
T Consensus 34 ~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~v~l~v~R-~g~ 94 (101)
T 1uez_A 34 GVGIYVSLVEPGSLAEKEGLRVGDQILRVNDKSLARVTHAEAVKALKGSKKLVLSVYS-AGR 94 (101)
T ss_dssp TCCEEEEEECTTSHHHHHTCCSSCCEEEETTEECSSCCHHHHHHHSSSSSSCCEEECC-CCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHhhcCCCeEEEEEEE-CCc
Confidence 3689999999999999999999999999999999999874422222556789999999 554
No 193
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=98.86 E-value=5.9e-09 Score=85.76 Aligned_cols=58 Identities=14% Similarity=0.302 Sum_probs=50.9
Q ss_pred CCceEEeEECCCCccccCC-CCCCCEEEEECCEeeC--CHHHHHHHHhcCCCCeEEEEEEEC
Q 013444 367 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPLKVVVQRA 425 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~--s~~dl~~~l~~~~g~~v~l~v~R~ 425 (443)
..|++|.+|.++|||+++| |++||+|++|||++|. ++.++..++.. .++++.|+|.|.
T Consensus 31 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~-~~~~v~l~v~R~ 91 (106)
T 4amh_A 31 DNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKN-TSDFVYLKVAKP 91 (106)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHS-CCSEEEEEEECC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhC-CCCeEEEEEEeC
Confidence 3589999999999999999 9999999999999995 47777777765 466999999994
No 194
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=98.86 E-value=3.6e-09 Score=84.91 Aligned_cols=59 Identities=27% Similarity=0.559 Sum_probs=51.6
Q ss_pred CceEEeEECCCCccccCCCCCCCEEEEECCEeeCCH--HHHHHHHhcCCCCeEEEEEEECCC
Q 013444 368 SGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSI--TEIIEIMGDRVGEPLKVVVQRAND 427 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s~--~dl~~~l~~~~g~~v~l~v~R~~g 427 (443)
.|++|..|.++|||+++||++||+|++|||+++.++ +++..++.. .++.+.+.+.|.++
T Consensus 29 ~~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~-~~~~~~~~~~r~~~ 89 (95)
T 3r68_A 29 KGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRK-GGDQTTLLVLDKEL 89 (95)
T ss_dssp CSEEEECCCTTSHHHHHTCCTTEEEEEETTEECTTCCHHHHHHHHHT-TTTEEEEEEEECC-
T ss_pred CCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHh-CCCeEEEEEECCcc
Confidence 499999999999999999999999999999999988 899988877 56677888887443
No 195
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=98.86 E-value=7.3e-09 Score=83.19 Aligned_cols=69 Identities=12% Similarity=0.256 Sum_probs=55.8
Q ss_pred eecCceeecccHHHHHHhhcCCCCCCCCCCceEEeEECCCCccccCCCCCCCEEEEECCEeeC--CHHHHHHHHhcCCCC
Q 013444 339 PWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGE 416 (443)
Q Consensus 339 p~lGi~~~~~~~~~~~~l~~~~~~~~~~~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~--s~~dl~~~l~~~~g~ 416 (443)
..+||.+..+++ +...|++|.+|.++|||+++||++||+|++|||++|. +++++.+++.+ +
T Consensus 20 ~~~Gf~v~~~~~--------------~~~~g~~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~~l~~~l~~---~ 82 (94)
T 3kzd_A 20 DTYGFSLSSVEE--------------DGIRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDFLSQ---P 82 (94)
T ss_dssp -CCSEEEEEECS--------------SSSCEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHHHHS---S
T ss_pred CCcCEEEEecCC--------------CCcCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhC---C
Confidence 468888776542 1235899999999999999999999999999999998 57999998874 4
Q ss_pred eEEEEEEE
Q 013444 417 PLKVVVQR 424 (443)
Q Consensus 417 ~v~l~v~R 424 (443)
.++++|..
T Consensus 83 ~l~ltV~~ 90 (94)
T 3kzd_A 83 SLGLLVRT 90 (94)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEEe
Confidence 57777754
No 196
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=98.86 E-value=3.2e-09 Score=86.01 Aligned_cols=56 Identities=16% Similarity=0.291 Sum_probs=51.2
Q ss_pred CceEEeEECCCCccccCC-CCCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEE
Q 013444 368 SGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQR 424 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R 424 (443)
.|++|.+|.++|||+++| |++||+|++|||++|.+ ++++.+++... ++++.|+|.+
T Consensus 36 ~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~~~-~~~v~L~V~~ 94 (97)
T 2ejy_A 36 QSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKET-KGMISLKVIP 94 (97)
T ss_dssp CCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHHHC-CEEEEEEEEC
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEE
Confidence 589999999999999999 99999999999999985 99999998865 5688888886
No 197
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=98.85 E-value=6.8e-09 Score=83.49 Aligned_cols=59 Identities=19% Similarity=0.451 Sum_probs=52.8
Q ss_pred CCceEEeEECCCCccccCC-CCCCCEEEEECCEeeC--CHHHHHHHHhcCCCCeEEEEEEECCC
Q 013444 367 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPLKVVVQRAND 427 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~--s~~dl~~~l~~~~g~~v~l~v~R~~g 427 (443)
..|++|..|.++|||+++| |++||+|++|||+++. ++.++..++.. .++++.|+|.| ++
T Consensus 32 ~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~-~g~~v~l~v~R-~~ 93 (96)
T 1d5g_A 32 HGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRN-TGQVVHLLLEK-GQ 93 (96)
T ss_dssp SSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHS-CCSEEEEEEEC-CS
T ss_pred cCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEc-CC
Confidence 4699999999999999999 9999999999999998 67888887776 67899999999 44
No 198
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=98.85 E-value=3.3e-09 Score=83.32 Aligned_cols=59 Identities=20% Similarity=0.342 Sum_probs=50.7
Q ss_pred CCceEEeEECCCCccccCCCCCCCEEEEECCEeeCCH--HHHHHHHhcCCCCeEEEEEEECCC
Q 013444 367 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSI--TEIIEIMGDRVGEPLKVVVQRAND 427 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s~--~dl~~~l~~~~g~~v~l~v~R~~g 427 (443)
..|++|.+|.++|||+++||++||+|++|||+++.++ .++...+.. .++++.|+|.| ++
T Consensus 24 ~~~v~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~R-~~ 84 (85)
T 1rgw_A 24 NMPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKS-ASYNLSLTLQK-SK 84 (85)
T ss_dssp TSCCBEEEECTTSHHHHSSCCCCSBEEEETTEECTTCCHHHHHHHHTT-CSSCEEEEEES-CC
T ss_pred CCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHHc-CCCeEEEEEEe-CC
Confidence 3589999999999999999999999999999999987 677766654 35679999998 54
No 199
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=98.85 E-value=6.1e-09 Score=83.05 Aligned_cols=59 Identities=27% Similarity=0.391 Sum_probs=51.0
Q ss_pred CceEEeEECCCCccccCCCCCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEECCCe
Q 013444 368 SGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQ 428 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R~~g~ 428 (443)
.|++|..|.++|||+++||++||+|++|||++|.+ +.++..++.. .++++.|+|.| ++.
T Consensus 24 ~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~-~~~~v~l~v~R-~~~ 84 (91)
T 2f5y_A 24 SPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRS-CPSEIILLVWR-MVP 84 (91)
T ss_dssp SSCEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHT-CSSEEEEEEEE-CC-
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEe-CCC
Confidence 47899999999999999999999999999999985 5788877765 45689999999 554
No 200
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=98.85 E-value=2.5e-09 Score=83.67 Aligned_cols=57 Identities=19% Similarity=0.449 Sum_probs=50.7
Q ss_pred CceEEeEECCCCccccCCCCCCCEEEEECCEeeCCH--HHHHHHHhcCCCCeEEEEEEEC
Q 013444 368 SGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSI--TEIIEIMGDRVGEPLKVVVQRA 425 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s~--~dl~~~l~~~~g~~v~l~v~R~ 425 (443)
.|++|..|.++|||+++||++||+|++|||+++.++ +++..++... ++.+.|+|.|+
T Consensus 23 ~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~-~~~v~l~v~R~ 81 (83)
T 2kv8_A 23 APCVLSCVMRGSPADFVGLRAGDQILAVNEINVKKASHEDVVKLIGKC-SGVLHMVIAEG 81 (83)
T ss_dssp SSCBCCBCCTTSTTTTTTCCTTCEEEEETTEECSSCCHHHHHHHHTTC-SSCEEEEEECC
T ss_pred CCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEEcC
Confidence 479999999999999999999999999999999998 8888877543 56799999983
No 201
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=98.84 E-value=2.6e-09 Score=87.97 Aligned_cols=60 Identities=28% Similarity=0.627 Sum_probs=53.9
Q ss_pred CCceEEeEECCCCccccCC-CCCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEECCCe
Q 013444 367 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQ 428 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R~~g~ 428 (443)
..|++|..|.++|||+++| |++||+|++|||++|.+ +.++..++.. .++++.|+|.| +++
T Consensus 43 ~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~-~g~~v~l~v~R-~~~ 105 (108)
T 2jre_A 43 ATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVVEVLRN-AGNPVRLLLIR-RLP 105 (108)
T ss_dssp CCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHHHHHHH-HCSEEEEEEEE-CCC
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEe-CCc
Confidence 4699999999999999999 99999999999999988 6888887776 67899999999 554
No 202
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=98.84 E-value=6.6e-10 Score=94.49 Aligned_cols=63 Identities=21% Similarity=0.370 Sum_probs=56.9
Q ss_pred CceEEeEECCCCccccCCCCCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEECCCeEEE
Q 013444 368 SGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQLVT 431 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R~~g~~~~ 431 (443)
.|++|..|.++|||+++||++||+|++|||+++.+ ++++..++....++.+.++|.| +++..+
T Consensus 33 ~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~l~v~R-~g~~~~ 97 (128)
T 2kjd_A 33 PGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLLVVDR-ETDEFF 97 (128)
T ss_dssp CSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTTCSEEEEEEECH-HHHHHH
T ss_pred CCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCEEEEEEEe-CCcceE
Confidence 59999999999999999999999999999999999 9999999988777888899999 665443
No 203
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=98.84 E-value=6.1e-09 Score=85.60 Aligned_cols=60 Identities=17% Similarity=0.372 Sum_probs=52.3
Q ss_pred CCceEEeEECCCCccccCCCCCCCEEEEECCEeeCCHHHHHHHHhc-CCCCeEEEEEEECCCe
Q 013444 367 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEIIEIMGD-RVGEPLKVVVQRANDQ 428 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s~~dl~~~l~~-~~g~~v~l~v~R~~g~ 428 (443)
..|++|..|.++|||+ +||++||+|++|||+++.++.++...+.. ..++++.|+|.| +++
T Consensus 38 ~~gv~V~~V~~~spA~-agl~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R-~~~ 98 (107)
T 2h2b_A 38 ETSIVISDVLKGGPAE-GQLQENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRR-KKG 98 (107)
T ss_dssp CCCEEEEEECTTSTTB-TTBCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEEE-ESC
T ss_pred CCCEEEEEECCCCchh-hCCCCCCEEEEECCEECCCccHHHHHHHhhCCCCEEEEEEEE-CCC
Confidence 4699999999999999 99999999999999999999877665433 678899999999 554
No 204
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=98.83 E-value=5.3e-09 Score=83.79 Aligned_cols=55 Identities=27% Similarity=0.443 Sum_probs=47.9
Q ss_pred CceEEeEECCCCccccCCCCCCCEEEEECCEeeCCHHHH--HHHHhcCCCCeEEEEEEE
Q 013444 368 SGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEI--IEIMGDRVGEPLKVVVQR 424 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s~~dl--~~~l~~~~g~~v~l~v~R 424 (443)
.|++|..|.++|||+++||++||+|++|||+++.++.+. ...+ +.++++.|+|.|
T Consensus 29 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~--~~g~~v~l~v~R 85 (93)
T 2dls_A 29 RIVLVQSVRPGGAAMKAGVKEGDRIIKVNGTMVTNSSHLEVVKLI--KSGAYVALTLLG 85 (93)
T ss_dssp SSCEEEEECSSSTTTTTTCCSSCEEEEETTEECSSSCHHHHHHHH--TSSSEEEEEEEC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHhh--cCCCEEEEEEEE
Confidence 589999999999999999999999999999999886444 3333 368999999999
No 205
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.83 E-value=4.4e-09 Score=88.77 Aligned_cols=61 Identities=20% Similarity=0.361 Sum_probs=55.1
Q ss_pred CCceEEeEECCCCccccCC-CCCCCEEEEECCEeeCC--HHHHHHHHhcC-CCCeEEEEEEECCCe
Q 013444 367 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDR-VGEPLKVVVQRANDQ 428 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s--~~dl~~~l~~~-~g~~v~l~v~R~~g~ 428 (443)
..+++|.+|.+++||+++| |++||+|++|||++|.+ ++++.++|... .++++.|+|.| +++
T Consensus 44 ~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R-~~~ 108 (122)
T 1v5q_A 44 SSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSSITSKVTLEIEF-DVA 108 (122)
T ss_dssp SSCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHHHHHHTTTTCEEEEEEE-ECC
T ss_pred CCCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEE-CCc
Confidence 3578999999999999999 99999999999999987 99999999874 48899999999 554
No 206
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=98.83 E-value=7.4e-09 Score=87.28 Aligned_cols=59 Identities=17% Similarity=0.369 Sum_probs=53.6
Q ss_pred CceEEeEECCCCccccCC-CCCCCEEEEECCEeeCC--HHHHHHHHhc-CCCCeEEEEEEECCC
Q 013444 368 SGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGD-RVGEPLKVVVQRAND 427 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s--~~dl~~~l~~-~~g~~v~l~v~R~~g 427 (443)
.|++|.+|.++|||+++| |++||+|++|||++|.+ ++++.+++.. ..|+++.|+|.| ++
T Consensus 58 ~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R-~g 120 (121)
T 2kom_A 58 APIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVVSLLRSTKMEGTVSLLVFR-QE 120 (121)
T ss_dssp CCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHHHHHHHHCCSSCEEEEEEEE-CC
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEEEEEEEe-CC
Confidence 689999999999999999 99999999999999988 6889888877 458899999999 54
No 207
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=98.82 E-value=1.1e-09 Score=93.35 Aligned_cols=59 Identities=24% Similarity=0.469 Sum_probs=52.5
Q ss_pred CceEEeEECCCCccccCC-CCCCCEEEEECCEee--CCHHHHHHHHhcCCCCeEEEEEEECCCe
Q 013444 368 SGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPV--QSITEIIEIMGDRVGEPLKVVVQRANDQ 428 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V--~s~~dl~~~l~~~~g~~v~l~v~R~~g~ 428 (443)
.|++|..|.++|||+++| |++||+|++|||++| .+++++..++.. .++.+.|+|.| +++
T Consensus 65 ~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~-~~~~v~l~v~r-~~~ 126 (128)
T 1nf3_C 65 PGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIA-NSRNLIITVRP-ANQ 126 (128)
T ss_dssp EEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHHHHHHHHHH-TTTSEEEEEEC-CCC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEE-CCc
Confidence 589999999999999999 999999999999999 789999998875 35679999999 543
No 208
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.82 E-value=3.9e-09 Score=86.24 Aligned_cols=58 Identities=24% Similarity=0.412 Sum_probs=52.4
Q ss_pred CCceEEeEECCCCccccCC-CCCCCEEEEECCEeeCC--HHHHHHHHhcCC-CCeEEEEEEE
Q 013444 367 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRV-GEPLKVVVQR 424 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s--~~dl~~~l~~~~-g~~v~l~v~R 424 (443)
..+++|..|.+++||+++| |++||+|++|||++|.+ ++++.++|.... ++++.|+|.|
T Consensus 33 ~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R 94 (103)
T 1uep_A 33 GQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHAARNGQVNLTVRR 94 (103)
T ss_dssp TSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTEEEEEEEE
T ss_pred CCCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCcEEEEEEe
Confidence 4689999999999999999 99999999999999954 889998887643 7899999999
No 209
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.82 E-value=1.2e-09 Score=90.49 Aligned_cols=69 Identities=17% Similarity=0.417 Sum_probs=57.7
Q ss_pred CCceEEeEECCCCccccCC-CCCCCEEEEECCEeeC--CHHHHHHHHhcCCCCeEEEEEEECCCeEEEEEEEec
Q 013444 367 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPLKVVVQRANDQLVTLTVIPE 437 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~--s~~dl~~~l~~~~g~~v~l~v~R~~g~~~~l~v~~~ 437 (443)
..|++|..|.++|||+++| |++||+|++|||+++. ++.++..++.. .++++.|+|.| +++..++.+++.
T Consensus 35 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~R-~~~~~~~~v~~~ 106 (110)
T 1um1_A 35 APGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRH-GGKKMRFLVAK-SDVETAKKIHSG 106 (110)
T ss_dssp CSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHHT-CCSEEEEEEEC-CCHHHHHHHSSC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEe-CCcceeEEEEec
Confidence 4699999999999999999 9999999999999997 47777776665 47899999999 676655555554
No 210
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.81 E-value=2.4e-09 Score=89.90 Aligned_cols=62 Identities=19% Similarity=0.267 Sum_probs=54.8
Q ss_pred CCceEEeEECCCCccccCC-CCCCCEEEEECCEeeC--CHHHHHHHHhcCCCCeEEEEEEECCCeE
Q 013444 367 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPLKVVVQRANDQL 429 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~--s~~dl~~~l~~~~g~~v~l~v~R~~g~~ 429 (443)
..|++|..|.+++||+++| |++||+|++|||++|. ++.++..++....+..+.+++.| +++.
T Consensus 41 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~~~~~l~v~R-~~~~ 105 (119)
T 1x6d_A 41 NKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQAREPRQAVIVTR-KLTP 105 (119)
T ss_dssp CSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHHTTSSSEEEEEEE-CCCS
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEc-CCCc
Confidence 3689999999999999999 9999999999999998 68888888887777778889999 5554
No 211
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=98.81 E-value=1e-08 Score=85.99 Aligned_cols=60 Identities=18% Similarity=0.298 Sum_probs=53.1
Q ss_pred CceEEeEECCCCccccCC-CCCCCEEEEECCEeeC--CHHHHHHHHhcCCCCeEEEEEEECCCeE
Q 013444 368 SGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPLKVVVQRANDQL 429 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~--s~~dl~~~l~~~~g~~v~l~v~R~~g~~ 429 (443)
.|++|.+|.++|||+++| |++||+|++|||++|. ++.++..++.... +++.|+|.| +++.
T Consensus 53 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~-~~v~l~v~R-~g~~ 115 (117)
T 2fne_A 53 LPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTK-GTVTLMVLS-SDET 115 (117)
T ss_dssp EEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCC-SSEEEEEEE-CSCE
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEe-CCcc
Confidence 589999999999999999 9999999999999999 8899988887644 469999999 5543
No 212
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=98.80 E-value=9.5e-09 Score=84.80 Aligned_cols=57 Identities=23% Similarity=0.353 Sum_probs=51.9
Q ss_pred CCceEEeEECCCCccccCCCCCCCEEEEECCEeeCCH--HHHHHHHhcCCCCeEEEEEEE
Q 013444 367 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSI--TEIIEIMGDRVGEPLKVVVQR 424 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s~--~dl~~~l~~~~g~~v~l~v~R 424 (443)
..|++|..|.++|||+++||++||+|++|||++|.++ .++.+++... ++++.|+|.|
T Consensus 44 ~~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~-~~~v~l~v~~ 102 (109)
T 1q3o_A 44 PALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQG-GNTLMVKVVM 102 (109)
T ss_dssp CSSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHHT-TTEEEEEEEE
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCEEEEEEEE
Confidence 4589999999999999999999999999999999998 8888888764 7789999988
No 213
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=98.80 E-value=2.5e-09 Score=89.07 Aligned_cols=64 Identities=28% Similarity=0.523 Sum_probs=55.4
Q ss_pred CCceEEeEECCCCccccCCCCCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEECCCeEEEE
Q 013444 367 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQLVTL 432 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R~~g~~~~l 432 (443)
..|++|..|.++|||+++||++||+|++|||++|.+ +.++.+++... |+++.|+|.| +++..++
T Consensus 37 ~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~R-~~~~~~~ 102 (114)
T 2edz_A 37 TDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVRKS-GNSVTLLVLD-GDSYEKA 102 (114)
T ss_dssp CCSCEEECCCTTCTTGGGTCCTTCEEEEESSSBCSSSCHHHHHHHHHHT-CSEEEEEEEC-HHHHHHH
T ss_pred CCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCEEEEEEEE-CCcceeh
Confidence 368999999999999999999999999999999987 48888888764 8999999999 6654433
No 214
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=98.80 E-value=1.1e-08 Score=84.71 Aligned_cols=61 Identities=16% Similarity=0.373 Sum_probs=54.2
Q ss_pred CCceEEeEECCCCccccCC-CCCCCEEEEECCEeeCC--HHHHHHHHhc-CCCCeEEEEEEECCCe
Q 013444 367 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGD-RVGEPLKVVVQRANDQ 428 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s--~~dl~~~l~~-~~g~~v~l~v~R~~g~ 428 (443)
..|++|..|.++|||+++| |++||+|++|||++|.+ ++++.+++.. ..++.+.|+|.| +++
T Consensus 38 ~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R-~~~ 102 (111)
T 2koj_A 38 SAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRSTKMEGTVSLLVFR-QEE 102 (111)
T ss_dssp SSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHHHHCCCSSEEEEEEEE-CCC
T ss_pred CcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEe-CCC
Confidence 3689999999999999999 99999999999999965 5899888877 468899999999 554
No 215
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.80 E-value=5.3e-09 Score=87.64 Aligned_cols=59 Identities=20% Similarity=0.411 Sum_probs=53.4
Q ss_pred CceEEeEECCCCccccCC-CCCCCEEEEECCEee--CCHHHHHHHHhcCCCCeEEEEEEECCCe
Q 013444 368 SGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPV--QSITEIIEIMGDRVGEPLKVVVQRANDQ 428 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V--~s~~dl~~~l~~~~g~~v~l~v~R~~g~ 428 (443)
.+++|..|.+++||+++| |++||+|++|||++| .+++++.++|.. .++.+.|+|.| +++
T Consensus 42 ~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~r-~~~ 103 (117)
T 1v62_A 42 SVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLAS-ISEKVRLEILP-VPQ 103 (117)
T ss_dssp CEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHHS-CSSEEEEEECC-BTT
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh-CCCeEEEEEEE-CCC
Confidence 359999999999999999 999999999999999 779999999984 78899999999 443
No 216
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=98.80 E-value=6.5e-09 Score=85.78 Aligned_cols=61 Identities=13% Similarity=0.374 Sum_probs=54.0
Q ss_pred CCceEEeEECCCCccccCC-CCCCCEEEEECCEeeCC--HHHHHHHHhcC--CCCeEEEEEEECCCe
Q 013444 367 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDR--VGEPLKVVVQRANDQ 428 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s--~~dl~~~l~~~--~g~~v~l~v~R~~g~ 428 (443)
..|++|.+|.++|||+++| |++||+|++|||+++.+ ++++.++|... .++.+.|+|.| .++
T Consensus 32 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~~~v~l~v~R-~~~ 97 (108)
T 3cbz_A 32 DGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDIVHKPGPIVLTVAK-SGG 97 (108)
T ss_dssp CCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHHHTSSSCEEEEEEC-CCC
T ss_pred CCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcccCCCeEEEEEEe-CCC
Confidence 4699999999999999999 99999999999999998 99999988764 45579999999 443
No 217
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=98.80 E-value=9.7e-09 Score=83.59 Aligned_cols=60 Identities=22% Similarity=0.497 Sum_probs=53.2
Q ss_pred CCceEEeEECCCCccccCC-CCCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEECCCe
Q 013444 367 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQ 428 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R~~g~ 428 (443)
..|++|..|.++|||+++| |++||+|++|||+++.+ +.++..++.. .++++.|+|.| +++
T Consensus 33 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~-~g~~v~l~v~R-~~~ 95 (102)
T 2i1n_A 33 DPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKE-AGPVVRLVVRR-RQP 95 (102)
T ss_dssp CCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHH-SCSEEEEEEEE-ECC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEe-CCC
Confidence 4699999999999999999 99999999999999977 7788777765 57899999999 554
No 218
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.80 E-value=5.2e-09 Score=84.75 Aligned_cols=57 Identities=25% Similarity=0.396 Sum_probs=51.4
Q ss_pred CceEEeEECCCCccccCCCCCCCEEEEECCEee--CCHHHHHHHHhc--CCCCeEEEEEEE
Q 013444 368 SGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPV--QSITEIIEIMGD--RVGEPLKVVVQR 424 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V--~s~~dl~~~l~~--~~g~~v~l~v~R 424 (443)
.+.+|.+|.++|||++|||++||+|++|||++| .+|+|+...+.. +.|+.+.|.|..
T Consensus 39 ~~~~I~~V~~gSpA~~AGL~~GD~I~~Ing~~v~~~s~~dv~~~i~~~~~~g~~v~LLV~~ 99 (101)
T 3qik_A 39 KAVVVKSVQRGSLAEVAGLQVGRKIYSINEDLVFLRPFSEVESILNQSFCSRRPLRLLVAT 99 (101)
T ss_dssp TEEEEEEECTTSHHHHHTCCTTCBEEEETTEESTTSCHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEEcCcCCHHHHHHHHHHhhccCCeEEEEEec
Confidence 578899999999999999999999999999998 499999999876 578899988863
No 219
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.80 E-value=9.4e-09 Score=84.22 Aligned_cols=58 Identities=21% Similarity=0.451 Sum_probs=52.9
Q ss_pred CCceEEeEECCCCccccCC-CCCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEEC
Q 013444 367 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRA 425 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R~ 425 (443)
..|++|..|.++|||+++| |++||+|++|||+++.+ +.++..++... ++.+.|+|.|.
T Consensus 37 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~-g~~v~l~v~R~ 97 (105)
T 1wha_A 37 DAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLLTAA-SPTIALLLERE 97 (105)
T ss_dssp CCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHHHHTSC-CSCEEEEEEEC
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEEC
Confidence 4699999999999999999 99999999999999987 88988888765 78899999993
No 220
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=98.79 E-value=1.6e-09 Score=90.14 Aligned_cols=67 Identities=16% Similarity=0.359 Sum_probs=54.1
Q ss_pred CCceEEeEECCCCccccCCCCCCCEEEEECCEeeCCHHH--HHHHHhcCCCCeEEEEEEECC-CeEEEEEEEe
Q 013444 367 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITE--IIEIMGDRVGEPLKVVVQRAN-DQLVTLTVIP 436 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s~~d--l~~~l~~~~g~~v~l~v~R~~-g~~~~l~v~~ 436 (443)
..|++|..|.+++||+++||++||+|++|||++|.++.+ +..++... +.+.|+|.| + ++.+++.+.+
T Consensus 40 ~~gv~V~~V~~~s~A~~aGL~~GD~Il~vng~~v~~~~~~~~~~~~~~~--~~v~l~v~r-~~g~~~~~~~~~ 109 (114)
T 1x5n_A 40 KPGIFISHVKPGSLSAEVGLEIGDQIVEVNGVDFSNLDHKEAVNVLKSS--RSLTISIVA-AAGRELFMTDRS 109 (114)
T ss_dssp SCSEEEEEECTTSTTTTTTCCTTCEEEEETTEETTSCCTTHHHHHHHHC--SSEEEEECS-STTTHHHHSSCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcC--CeEEEEEEc-CCCCceEEEecc
Confidence 469999999999999999999999999999999998854 66666543 579999999 5 6654444443
No 221
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.79 E-value=5.1e-09 Score=96.82 Aligned_cols=73 Identities=23% Similarity=0.399 Sum_probs=60.1
Q ss_pred CCCCceEEeEECCCCccccCCCCCC-CEEEEECCEeeCCHHHHHHHH-hcCCCCeEEEEEEECC-CeEEEEEEEec
Q 013444 365 NVKSGVLVPVVTPGSPAHLAGFLPS-DVVIKFDGKPVQSITEIIEIM-GDRVGEPLKVVVQRAN-DQLVTLTVIPE 437 (443)
Q Consensus 365 ~~~~g~~V~~v~~~spA~~aGl~~G-DiI~~vng~~V~s~~dl~~~l-~~~~g~~v~l~v~R~~-g~~~~l~v~~~ 437 (443)
....|++|.+|.++|||++|||++| |+|++|||++|.+|.++...+ ....|++++++|.|.+ ++..++++.+.
T Consensus 13 ~~~~G~~V~~V~~~SpA~~AGL~~G~D~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~~~~~v~l~p~ 88 (209)
T 3rle_A 13 GGTEGYHVLRVQENSPGHRAGLEPFFDFIVSINGSRLNKDNDTLKDLLKANVEKPVKMLIYSSKTLELRETSVTPS 88 (209)
T ss_dssp SSSEEEEEEEECTTSHHHHTTCCTTTEEEEEETTEECCSSSSHHHHHHHHTTTSCEEEEEEETTTCCEEEEEECCC
T ss_pred CCCCEEEEEEECCCCHHHHCCCCcCCeEEEEECCEECcCHHHHHHHHHhcCCCCEEEEEEEecCCceEEEEEEccc
Confidence 3457999999999999999999999 999999999999999877655 4477899999999942 34556666443
No 222
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.79 E-value=9.5e-09 Score=85.03 Aligned_cols=57 Identities=28% Similarity=0.587 Sum_probs=51.2
Q ss_pred CceEEeEECCCCccccCC-CCCCCEEEEECCEeeC--CHHHHHHHHhcCCCCeEEEEEEEC
Q 013444 368 SGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPLKVVVQRA 425 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~--s~~dl~~~l~~~~g~~v~l~v~R~ 425 (443)
.|++|..|.+++||+++| |++||+|++|||++|. +++++..++.. .++++.|+|.|.
T Consensus 38 ~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~-~g~~v~l~v~R~ 97 (111)
T 2dlu_A 38 SGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRN-CGNSVRMLVARD 97 (111)
T ss_dssp SSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHHH-HCSEEEEEEEES
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh-CCCeEEEEEEeC
Confidence 589999999999999999 9999999999999998 56888887765 478899999993
No 223
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.78 E-value=1.1e-08 Score=85.08 Aligned_cols=59 Identities=19% Similarity=0.434 Sum_probs=52.7
Q ss_pred CceEEeEECCCCccccCCC-CCCCEEEEECCEeeC--CHHHHHHHHhcCCCCeEEEEEEECCCe
Q 013444 368 SGVLVPVVTPGSPAHLAGF-LPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPLKVVVQRANDQ 428 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aGl-~~GDiI~~vng~~V~--s~~dl~~~l~~~~g~~v~l~v~R~~g~ 428 (443)
.|++|.+|.+++||+++|| ++||+|++|||++|. +++++.+++.... +++.|+|.| +++
T Consensus 48 ~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~~~~~~~l~~~~-~~v~l~v~r-~~~ 109 (113)
T 1va8_A 48 DSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMH-GTLTFVLIP-SSG 109 (113)
T ss_dssp SSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCC-EEEEEEEEC-CCC
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEE-CCc
Confidence 5899999999999999999 999999999999999 7889999887644 579999999 554
No 224
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=98.78 E-value=1.1e-08 Score=85.82 Aligned_cols=60 Identities=15% Similarity=0.290 Sum_probs=53.6
Q ss_pred CCceEEeEECCCCccccCC-CCCCCEEEEECCEeeC--CHHHHHHHHhcCCCCeEEEEEEECCCe
Q 013444 367 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPLKVVVQRANDQ 428 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~--s~~dl~~~l~~~~g~~v~l~v~R~~g~ 428 (443)
..|++|.+|.++|||+++| |++||+|++|||++|. ++.++..++... ++++.|+|.| +++
T Consensus 53 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~-g~~v~l~v~R-~~~ 115 (117)
T 2byg_A 53 DNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKNT-SEVVYLKVGK-PTT 115 (117)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTC-CSEEEEEEEE-EEE
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEe-CCc
Confidence 3589999999999999999 9999999999999998 888888888754 7899999999 443
No 225
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=98.78 E-value=1e-08 Score=83.31 Aligned_cols=59 Identities=19% Similarity=0.443 Sum_probs=51.5
Q ss_pred CCceEEeEECCCCccccCC-CCCCCEEEEECCEeeCCH--HHHHHHHhcCCCCeEEEEEEECCC
Q 013444 367 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQSI--TEIIEIMGDRVGEPLKVVVQRAND 427 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s~--~dl~~~l~~~~g~~v~l~v~R~~g 427 (443)
..|++|.+|.++|||+++| |++||+|++|||+++.++ .++..++.. .++++.|+|.| ++
T Consensus 36 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~-~g~~v~l~v~R-~~ 97 (101)
T 2jik_A 36 DSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRN-AGYAVSLRVQH-RL 97 (101)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHT-CCSEEEEEEEE-ES
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHh-CCCeEEEEEEe-CC
Confidence 4699999999999999999 999999999999999874 677776665 47889999999 44
No 226
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.78 E-value=6.8e-09 Score=84.83 Aligned_cols=60 Identities=22% Similarity=0.357 Sum_probs=52.5
Q ss_pred CCceEEeEECCCCccccCC-CCCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEECCCe
Q 013444 367 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQ 428 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R~~g~ 428 (443)
..+++|..|.+++||+++| |++||+|++|||++|.+ +.++..++.. .++++.|+|.| +++
T Consensus 37 ~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~-~g~~v~l~v~R-~g~ 99 (104)
T 2djt_A 37 DTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIRA-GGPQLHLVIRR-PLS 99 (104)
T ss_dssp ECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHHH-TCSEEEEEECC-CCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEE-CCC
Confidence 3589999999999999999 99999999999999987 5777777765 67899999999 554
No 227
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=98.78 E-value=1.4e-08 Score=81.26 Aligned_cols=59 Identities=12% Similarity=0.265 Sum_probs=50.8
Q ss_pred CCceEEeEECCCCccccCC-CCCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEECCC
Q 013444 367 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRAND 427 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R~~g 427 (443)
..|++|.+|.++|||+++| |++||+|++|||+++.+ +.++...+... ++++.|+|.| ++
T Consensus 32 ~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~~~v~l~v~R-~g 93 (94)
T 2fe5_A 32 DNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNT-SDMVYLKVAK-PG 93 (94)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHTC-CSEEEEEEEC-CC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEc-CC
Confidence 4699999999999999999 99999999999999987 56777766654 4589999998 54
No 228
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=98.77 E-value=1.5e-08 Score=80.70 Aligned_cols=57 Identities=19% Similarity=0.364 Sum_probs=49.4
Q ss_pred CCceEEeEECCCCccccCC-CCCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEE
Q 013444 367 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQR 424 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R 424 (443)
..|++|.+|.++|||+++| |++||+|++|||+++.+ ..++..++.. .++++.|+|.|
T Consensus 28 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~R 87 (92)
T 2qg1_A 28 DTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKC-SLGTVTLEVGR 87 (92)
T ss_dssp SCSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHH-CCSEEEEEEEC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEc
Confidence 3699999999999999999 99999999999999976 4666666654 46789999999
No 229
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.77 E-value=8.4e-09 Score=86.02 Aligned_cols=59 Identities=17% Similarity=0.354 Sum_probs=52.3
Q ss_pred CceEEeEECCCCccccCC-CCCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEECCCe
Q 013444 368 SGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQ 428 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R~~g~ 428 (443)
.|++|..|.++|||+++| |++||+|++|||++|.+ +.++..++... ++++.|+|.| +++
T Consensus 43 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~-~~~v~l~v~R-~~~ 104 (116)
T 2dm8_A 43 NAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQT-PQKVRLVVYR-DEA 104 (116)
T ss_dssp SSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHHHTC-CSEEEEEEEC-CSS
T ss_pred CCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEEe-CCc
Confidence 599999999999999999 99999999999999987 78888877654 3789999999 554
No 230
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.77 E-value=9e-09 Score=85.12 Aligned_cols=57 Identities=19% Similarity=0.334 Sum_probs=52.8
Q ss_pred CceEEeEECCCCccccCC-CCCCCEEEEECCEeeCC--HHHHHHHHhcCC---CCeEEEEEEE
Q 013444 368 SGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRV---GEPLKVVVQR 424 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s--~~dl~~~l~~~~---g~~v~l~v~R 424 (443)
.+++|..|.+++||+++| |++||+|++|||+++.+ ++++.++|+... +++++|++.|
T Consensus 41 ~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~~r~~~~~~l~v~R 103 (109)
T 1wi4_A 41 PLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRAKLRSESPWEIAFIR 103 (109)
T ss_dssp SSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHHSCCSSSSCEEEEEEC
T ss_pred CCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHccccCCCceEEEEEEe
Confidence 489999999999999999 99999999999999987 899999998755 8899999999
No 231
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.77 E-value=7.8e-09 Score=87.76 Aligned_cols=57 Identities=19% Similarity=0.367 Sum_probs=53.6
Q ss_pred CceEEeEECCCCccccCC-CCCCCEEEEECCEeeC--CHHHHHHHHhc-CCCCeEEEEEEE
Q 013444 368 SGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQ--SITEIIEIMGD-RVGEPLKVVVQR 424 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~--s~~dl~~~l~~-~~g~~v~l~v~R 424 (443)
.+++|..|.+++||+++| |++||+|++|||++|. +++++.++|.. ..|+++.|+|.|
T Consensus 49 ~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~~~~G~~v~l~V~R 109 (126)
T 1wif_A 49 PYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNITIGTVLQIKAYR 109 (126)
T ss_dssp TEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSCCSSCEEEEEEES
T ss_pred CcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEEEEEEEE
Confidence 578999999999999999 9999999999999995 89999999987 679999999999
No 232
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=98.77 E-value=9e-09 Score=81.73 Aligned_cols=57 Identities=21% Similarity=0.393 Sum_probs=50.9
Q ss_pred CceEEeEECCCCccccCC-CCCCCEEEEECCEee--CCHHHHHHHHhcC-CCCeEEEEEEE
Q 013444 368 SGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPV--QSITEIIEIMGDR-VGEPLKVVVQR 424 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V--~s~~dl~~~l~~~-~g~~v~l~v~R 424 (443)
.+++|.+|.++|||+++| |++||+|++|||+++ .++.++..++... .++++.|+|.|
T Consensus 27 ~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~v~l~v~R 87 (90)
T 2q9v_A 27 EPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAAKQGHVNLTVRQ 87 (90)
T ss_dssp SCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTEEEEEEEE
T ss_pred CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEe
Confidence 579999999999999999 999999999999999 6688998888763 34589999998
No 233
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=98.76 E-value=1.7e-08 Score=83.84 Aligned_cols=60 Identities=17% Similarity=0.404 Sum_probs=51.9
Q ss_pred CCceEEeEECCCCccccCC-CCCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEECCCe
Q 013444 367 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQ 428 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R~~g~ 428 (443)
..|++|..|.++|||+++| |++||+|++|||++|.+ +.++..++.. .++++.|+|.| ++.
T Consensus 48 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~-~g~~v~l~v~R-~~~ 110 (112)
T 2r4h_A 48 NMDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIELIKN-GGRRVRLFLKR-GET 110 (112)
T ss_dssp TCCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHT-TTTEEEEEEEC-CEE
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEe-CCc
Confidence 3689999999999999999 99999999999999976 5677776665 67899999999 554
No 234
>1yph_C Chymotrypsin A, chain B; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1afq_B* 1ca0_B 1cbw_B 1cho_F 1gct_B 1ab9_B* 1ggd_B* 1gha_F 1ghb_F* 1gmc_F 1gmd_F 1gmh_F 1hja_B 1mtn_B 1n8o_B 1vgc_B* 1gg6_B 2cha_B* 2gch_F 2gct_B ...
Probab=98.76 E-value=1.1e-07 Score=80.87 Aligned_cols=96 Identities=20% Similarity=0.255 Sum_probs=65.8
Q ss_pred CCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeC---------CCcEEEEEEEe
Q 013444 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQ---------DGRTFEGTVLN 205 (443)
Q Consensus 135 ~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~---------dg~~~~a~vv~ 205 (443)
.|..|.|.... +...|.|.+|+++ +|||+|||+.+. .+.|.+. +++.+..+-+.
T Consensus 12 ~Pw~v~l~~~~-------~~~~CgGsLIs~~-~VLTAAHC~~~~---------~~~v~~G~~~~~~~~~~~~~~~v~~i~ 74 (131)
T 1yph_C 12 WPWQVSLQDKT-------GFHFCGGSLINEN-WVVTAAHCGVTT---------SDVVVAGEFDQGSSSEKIQKLKIAKVF 74 (131)
T ss_dssp STTEEEEECTT-------SCEEEEEEEEETT-EEEECGGGCCCT---------TSEEEESCSBTTCSSSCCEEEEEEEEE
T ss_pred cCcEEEEEeCC-------CCEEEEEEEeeCC-EEEECHHHCCCC---------CeEEEEeEccCCCCCCceEEEEEEEEE
Confidence 57788886431 2256999999988 999999998651 1223332 12445555555
Q ss_pred ecC-------CCCEEEEEEcCCC----CCCccccCCCC-CCCCCCEEEEEecCC
Q 013444 206 ADF-------HSDIAIVKINSKT----PLPAAKLGTSS-KLCPGDWVVAMGCPH 247 (443)
Q Consensus 206 ~d~-------~~DlAlLkl~~~~----~~~~~~l~~s~-~~~~G~~V~~iG~p~ 247 (443)
.|+ .+|||||+++.+. .+.|+.|.... .+..|+.+++.||..
T Consensus 75 ~hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~g~~~~v~GWG~ 128 (131)
T 1yph_C 75 KNSKYNSLTINNDITLLKLSTAASFSQTVSAVCLPSASDDFAAGTTCVTTGWGL 128 (131)
T ss_dssp ECTTCCTTTCCSCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCC
T ss_pred eCCCCCCCCCCCCEEEEEECCcccCCCcCcceECCCcccCCCCCCEEEEEcCCc
Confidence 554 3699999998763 35677776533 356899999999974
No 235
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.76 E-value=1e-08 Score=81.55 Aligned_cols=56 Identities=23% Similarity=0.536 Sum_probs=48.4
Q ss_pred CceEEeEECCCCccccCCCCCCCEEEEECCEeeCCHHH--HHHHHhcCCCCeEEEEEEE
Q 013444 368 SGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITE--IIEIMGDRVGEPLKVVVQR 424 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s~~d--l~~~l~~~~g~~v~l~v~R 424 (443)
.|++|..|.++|||+++||++||+|++|||+++.++.+ +...+. ..++++.|+|.|
T Consensus 32 ~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~-~~g~~v~l~v~R 89 (91)
T 1m5z_A 32 KGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRDFDCCLVVPLIA-ESGNKLDLVISR 89 (91)
T ss_dssp SCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHH-TSTTEEEEEEEE
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH-cCCCEEEEEEEe
Confidence 69999999999999999999999999999999998643 444444 458899999998
No 236
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=98.76 E-value=2.6e-09 Score=88.78 Aligned_cols=68 Identities=21% Similarity=0.346 Sum_probs=57.0
Q ss_pred CCceEEeEECCCCccccCC-CCCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEECCCeEEEEEEEe
Q 013444 367 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQLVTLTVIP 436 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R~~g~~~~l~v~~ 436 (443)
..|++|..|.++|||+++| |++||+|++|||+++.+ +.++..++... ++++.|+|.| +++..++++.+
T Consensus 34 ~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~-g~~v~l~v~R-~~~~~~~~v~p 104 (113)
T 2g5m_B 34 KLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRNT-KGRVRFMIGR-ERPGEQSEVAQ 104 (113)
T ss_dssp CEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHHHHHHHHHS-CSSCEEEEEE-CCCCTTSSCSS
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcC-CCeEEEEEEe-CCCCCcchhhh
Confidence 4699999999999999999 99999999999999975 67777767654 7899999999 66655555544
No 237
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.76 E-value=8.3e-09 Score=87.83 Aligned_cols=60 Identities=27% Similarity=0.516 Sum_probs=55.5
Q ss_pred CCceEEeEECCCCccccCC-CCCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEECCCe
Q 013444 367 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQ 428 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R~~g~ 428 (443)
..|++|..|.++|||+++| |++||+|++|||++|.+ ++++.+++.. .++.+.|+|.| +++
T Consensus 45 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~-~~~~v~l~v~R-~~~ 107 (129)
T 2dmz_A 45 ASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEVLRN-AGQVVHLTLVR-RKT 107 (129)
T ss_dssp CCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHHHHHHH-CCSSEEEEEEE-ESS
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEe-CCc
Confidence 4699999999999999999 99999999999999999 9999998887 78899999999 554
No 238
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.76 E-value=4.9e-09 Score=87.10 Aligned_cols=57 Identities=23% Similarity=0.411 Sum_probs=52.9
Q ss_pred CceEEeEECCCCccccCCCCCCCEEEEECCEeeC--CHHHHHHHHhcCCCCeEEEEEEE
Q 013444 368 SGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPLKVVVQR 424 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~--s~~dl~~~l~~~~g~~v~l~v~R 424 (443)
.+++|..|.+++||+++||++||+|++|||++|. +|+++.+++....++++.|+|.|
T Consensus 36 ~~v~V~~V~~~spA~~aGL~~GD~Il~InG~~v~~~~~~d~~~~i~~~~~~~v~l~V~~ 94 (111)
T 1vae_A 36 TPVQVHFLDPHCSASLAGAKEGDYIVSIQGVDCKWLTVSEVMKLLKSFGGEEVEMKVVS 94 (111)
T ss_dssp SSCEECCCCTTSSHHHHHCCTTCEEEEETTEECSSCCHHHHHHHHHHTTTSEECEEEEC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCceEEEEEEe
Confidence 4788999999999999999999999999999999 99999999987777789999987
No 239
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.75 E-value=1.2e-08 Score=84.84 Aligned_cols=59 Identities=17% Similarity=0.353 Sum_probs=53.7
Q ss_pred CceEEeEECCCCcccc-CCCCCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEECCCe
Q 013444 368 SGVLVPVVTPGSPAHL-AGFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQ 428 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~-aGl~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R~~g~ 428 (443)
.+++|..|.++|||++ +||++||+|++|||++|.+ ++++.++|.. .++.+.|+|.| +++
T Consensus 43 ~~~~V~~V~~~spA~~~agL~~GD~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~r-~~~ 104 (114)
T 1uew_A 43 VPHKIGRIIDGSPADRCAKLKVGDRILAVNGQSIINMPHADIVKLIKD-AGLSVTLRIIP-QEE 104 (114)
T ss_dssp CSCEEEEECTTCTTGGGSSCCTTCBEEEETTBCTTTSCHHHHHHHHHH-TTTEEEEEECC-CSC
T ss_pred cCeEEEEECCCChHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEe-CCc
Confidence 3679999999999999 9999999999999999998 6999998887 78899999999 554
No 240
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=98.75 E-value=1.8e-08 Score=84.07 Aligned_cols=56 Identities=14% Similarity=0.334 Sum_probs=50.3
Q ss_pred CceEEeEECCCCccccCC-CCCCCEEEEECCEee--CCHHHHHHHHhcCCCCeEEEEEEE
Q 013444 368 SGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPV--QSITEIIEIMGDRVGEPLKVVVQR 424 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V--~s~~dl~~~l~~~~g~~v~l~v~R 424 (443)
.+++|.+|.++|||+++| |++||+|++|||+++ .+++++.+++.... +.+.|+|.+
T Consensus 50 ~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~~ 108 (114)
T 2gzv_A 50 PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVK-GEVTIHYNK 108 (114)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCC-SEEEEEEEC
T ss_pred CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEe
Confidence 589999999999999999 999999999999999 89999998887644 468888876
No 241
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=98.74 E-value=2e-08 Score=82.40 Aligned_cols=60 Identities=23% Similarity=0.408 Sum_probs=52.6
Q ss_pred CCceEEeEECCCCccccCC-CCCCCEEEEECCEeeC--CHHHHHHHHhcCCCCeEEEEEEECCCe
Q 013444 367 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPLKVVVQRANDQ 428 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~--s~~dl~~~l~~~~g~~v~l~v~R~~g~ 428 (443)
..|++|..|.++|||+++| |++||+|++|||+++. ++.++..++.. .++++.|+|.| +++
T Consensus 37 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~~-~g~~v~l~v~R-~~~ 99 (106)
T 3axa_A 37 KLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTR-TSSVVTLEVAK-QGA 99 (106)
T ss_dssp SEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT-CCSEEEEEEEC-CCS
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEe-CCc
Confidence 4699999999999999999 9999999999999997 57777777755 68899999999 543
No 242
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=98.74 E-value=4e-08 Score=78.80 Aligned_cols=57 Identities=19% Similarity=0.402 Sum_probs=49.7
Q ss_pred CCCceEEeEECCCCccccCCCCCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEE
Q 013444 366 VKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQR 424 (443)
Q Consensus 366 ~~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R 424 (443)
...|++|.+|.++|||++ ||++||+|++|||+++.+ +.++...+. ..++++.|+|.|
T Consensus 33 ~~~gv~V~~V~~~spA~~-gL~~GD~I~~vng~~v~~~~~~~~~~~~~-~~~~~v~l~v~R 91 (95)
T 1mfg_A 33 DDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLK-TFQNTVELIIVR 91 (95)
T ss_dssp TCCCEEEEEECTTSTTTT-TCCTTCEEEEETTEECTTCBHHHHHHHHH-HCCSEEEEEEEE
T ss_pred CCCCEEEEEECCCCchhh-CCCCCCEEEEECCEEcCCCCHHHHHHHhh-cCCCeEEEEEEe
Confidence 356999999999999999 999999999999999987 666666665 457899999999
No 243
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=98.73 E-value=3.4e-08 Score=101.33 Aligned_cols=71 Identities=25% Similarity=0.418 Sum_probs=64.6
Q ss_pred CceEEeEECCCCccccCCCCCCCEEEEECCEeeCCHHHHHHHHhcCCCCeEEEEEEECCCeEEEEEEEecCCC
Q 013444 368 SGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEIIEIMGDRVGEPLKVVVQRANDQLVTLTVIPEEAN 440 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s~~dl~~~l~~~~g~~v~l~v~R~~g~~~~l~v~~~~~~ 440 (443)
.|++|.+|.++|||+++||++||+|++|||++|.+|+|+.+++..+.+ .+.|+|.| +++.+.+.+.+....
T Consensus 363 ~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~l~~~~~-~v~l~v~R-~g~~~~~~~~~~~~~ 433 (436)
T 4a8c_A 363 KGIKIDEVVKGSPAAQAGLQKDDVIIGVNRDRVNSIAEMRKVLAAKPA-IIALQIVR-GNESIYLLMRLEHHH 433 (436)
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHHhCCC-eEEEEEEE-CCEEEEEEEEecccC
Confidence 599999999999999999999999999999999999999999987444 89999999 889888888887654
No 244
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=98.72 E-value=2.5e-08 Score=81.33 Aligned_cols=56 Identities=18% Similarity=0.489 Sum_probs=48.5
Q ss_pred CceEEeEECCCCccccCC-CCCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEE
Q 013444 368 SGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQR 424 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R 424 (443)
.|++|..|.++|||+++| |++||+|++|||+++.+ +.++...+.. .++++.|+|.|
T Consensus 35 ~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~r 93 (104)
T 3i4w_A 35 EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKN-AGQTVTIIAQY 93 (104)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHHHT-SCSEEEEEEEE
T ss_pred CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEE
Confidence 499999999999999999 99999999999999954 5555555554 67899999999
No 245
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.72 E-value=1.8e-08 Score=84.33 Aligned_cols=60 Identities=20% Similarity=0.428 Sum_probs=53.1
Q ss_pred CCceEEeEECCCCccccCC-CCCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEECCCe
Q 013444 367 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQ 428 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R~~g~ 428 (443)
..|++|..|.+++||+++| |++||+|++|||+++.+ +.++..++.. .++.+.|+|.| +++
T Consensus 48 ~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~-~~~~v~l~v~R-~~~ 110 (117)
T 1ujd_A 48 EIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEVQSIISQ-QSGEAEICVRL-DLN 110 (117)
T ss_dssp CEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHSC-CSSCEEEEEES-SCC
T ss_pred CcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc-CCCEEEEEEEE-CCc
Confidence 3589999999999999999 99999999999999976 7888888876 67789999999 554
No 246
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=98.72 E-value=2.3e-08 Score=82.10 Aligned_cols=56 Identities=21% Similarity=0.344 Sum_probs=51.0
Q ss_pred ceEEeEECCCCccccCCCCCCCEEEEECCEeeC--CHHHHHHHHhcCCCCeEEEEEEEC
Q 013444 369 GVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPLKVVVQRA 425 (443)
Q Consensus 369 g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~--s~~dl~~~l~~~~g~~v~l~v~R~ 425 (443)
+++|..|.++|||+++||++||+|++|||+++. +++++..++.. .++.+.|+|.|.
T Consensus 44 ~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~r~ 101 (107)
T 3qe1_A 44 LQHVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHKQVVDLIRA-GEKELILTVLSV 101 (107)
T ss_dssp CEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHH-CSSEEEEEEECS
T ss_pred ceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCEEEEEEEcC
Confidence 557999999999999999999999999999999 88999998875 578999999993
No 247
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=98.72 E-value=2.3e-08 Score=80.31 Aligned_cols=60 Identities=23% Similarity=0.456 Sum_probs=51.9
Q ss_pred CCceEEeEECCCCccccCC-CCCCCEEEEECCEeeCCH--HHHHHHHhcCCCCeEEEEEEECCCe
Q 013444 367 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQSI--TEIIEIMGDRVGEPLKVVVQRANDQ 428 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s~--~dl~~~l~~~~g~~v~l~v~R~~g~ 428 (443)
..|++|..|.++|||+++| |++||+|++|||+++.++ .++..++.. .++++.|+|.| +++
T Consensus 32 ~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~r-~g~ 94 (97)
T 2iwn_A 32 PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRH-TGQTVLLTLMR-RGE 94 (97)
T ss_dssp CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHT-CCSEEEEEEEE-EEE
T ss_pred CCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEe-CCC
Confidence 4699999999999999999 999999999999999864 666766665 78899999999 443
No 248
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=98.72 E-value=6.8e-09 Score=87.43 Aligned_cols=60 Identities=10% Similarity=0.267 Sum_probs=51.8
Q ss_pred CceEEeEECCCCccccC-CCCCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEECCCeE
Q 013444 368 SGVLVPVVTPGSPAHLA-GFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQL 429 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~a-Gl~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R~~g~~ 429 (443)
.|++|..|.++|||+++ ||++||+|++|||+++.+ +.++..++... +++++|+|.| +++.
T Consensus 53 ~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~-~~~v~l~v~r-~g~~ 115 (120)
T 2iwo_A 53 VPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLLKNA-SGSIEMQVVA-GGDV 115 (120)
T ss_dssp EEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHHHHHHHHHC-CSEEEEEEEC-CTTS
T ss_pred CCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEE-CCcc
Confidence 58999999999999998 999999999999999986 67777777664 5679999999 5553
No 249
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.71 E-value=1.1e-08 Score=85.39 Aligned_cols=54 Identities=13% Similarity=0.279 Sum_probs=49.2
Q ss_pred CceEEeEECCCCccccCCCCCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEE
Q 013444 368 SGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQR 424 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R 424 (443)
.|++|..|.++|||+++||++||+|++|||++|.+ |+++.+++.. +.+.|+|.|
T Consensus 44 ~gv~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l~~---~~v~l~v~R 99 (114)
T 2d8i_A 44 RRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDFLSQ---PSLGLLVRT 99 (114)
T ss_dssp EEEEEEECCTTSSHHHHTCCTTCCEEEESSCBGGGCCHHHHHHHHTS---SEEEEEEEE
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHhC---CcEEEEEEE
Confidence 58999999999999999999999999999999988 6788888864 389999999
No 250
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.71 E-value=3.2e-08 Score=79.84 Aligned_cols=58 Identities=21% Similarity=0.433 Sum_probs=50.5
Q ss_pred CceEEeEECCCCccccCCCCCCCEEEEECCEeeCC--HHHHHHHHhcC-CCCeEEEEEEECCCe
Q 013444 368 SGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQS--ITEIIEIMGDR-VGEPLKVVVQRANDQ 428 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s--~~dl~~~l~~~-~g~~v~l~v~R~~g~ 428 (443)
.|++|..|.+ +|+++||++||+|++|||++|.+ ++++.++|... .++++.|+|.| +++
T Consensus 32 ~Gv~V~~v~~--~a~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R-~g~ 92 (96)
T 1ujv_A 32 TGQRVKQILD--IQGCPGLCEGDLIVEINQQNVQNLSHTEVVDILKDCPIGSETSLIIHR-GSG 92 (96)
T ss_dssp TEEEEEEESC--GGGSTTCCSSCEEEEETTEECSSCCHHHHHHHHHHSCTTSEEEEEEEC-CSS
T ss_pred CCEEEEEEec--ccccCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEEEEEE-CCC
Confidence 4899999988 47899999999999999999976 58999989875 48999999999 553
No 251
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.71 E-value=1.3e-08 Score=83.72 Aligned_cols=60 Identities=18% Similarity=0.444 Sum_probs=53.3
Q ss_pred CCceEEeEECCCCccccCC-CCCCCEEEEECCEeeC--CHHHHHHHHhcCCCCeEEEEEEECCCe
Q 013444 367 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPLKVVVQRANDQ 428 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~--s~~dl~~~l~~~~g~~v~l~v~R~~g~ 428 (443)
..|++|.+|.++|||+++| |++||+|++|||+++. ++.++..++.. .++++.|+|.| ++.
T Consensus 41 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~-~g~~v~l~v~R-~~~ 103 (108)
T 1q7x_A 41 HGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRN-TGQVVHLLLEK-GQS 103 (108)
T ss_dssp SCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHHHHHHHH-TTSEEEEEEEC-CCC
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEe-CCc
Confidence 4699999999999999999 9999999999999998 77788887766 47899999999 554
No 252
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.71 E-value=2.7e-08 Score=79.41 Aligned_cols=57 Identities=23% Similarity=0.411 Sum_probs=49.8
Q ss_pred CCceEEeEECCCCccccCC-CCCCCEEEEECCEeeC--CHHHHHHHHhcCCCCeEEEEEEE
Q 013444 367 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPLKVVVQR 424 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~--s~~dl~~~l~~~~g~~v~l~v~R 424 (443)
..+++|..|.++|||+++| |++||+|++|||+++. ++.++..++... ++++.|+|.|
T Consensus 29 ~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~~~v~l~v~r 88 (93)
T 2dkr_A 29 NSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAA-QGSVKLVVRS 88 (93)
T ss_dssp SCCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHHC-CSEEEEEECC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCcEEEEEEe
Confidence 4689999999999999996 9999999999999998 467888777654 4589999998
No 253
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=98.71 E-value=3.2e-08 Score=83.00 Aligned_cols=57 Identities=18% Similarity=0.322 Sum_probs=52.5
Q ss_pred CCceEEeEECCCCccccCC-CCCCCEEEEECCEeeC--CHHHHHHHHhcCCCCeEEEEEEE
Q 013444 367 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPLKVVVQR 424 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~--s~~dl~~~l~~~~g~~v~l~v~R 424 (443)
..|++|..|.++|||+++| |++||+|++|||+++. ++.++..++... ++++.|+|.|
T Consensus 52 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~-~~~v~L~v~R 111 (118)
T 3b76_A 52 DLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKRT-SSSIVLKALE 111 (118)
T ss_dssp CCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHHSC-CSEEEEEEEE
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEE
Confidence 4689999999999999999 9999999999999999 899999888764 6789999998
No 254
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.71 E-value=7.1e-09 Score=87.71 Aligned_cols=60 Identities=18% Similarity=0.326 Sum_probs=51.1
Q ss_pred CCceEEeEECCCCccccCC-CCCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEECCCe
Q 013444 367 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQ 428 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R~~g~ 428 (443)
..|++|..|.++|||+++| |++||+|++|||++|.+ +.++..++... ++++.|+|.| +++
T Consensus 50 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~-~~~v~l~v~R-~~~ 112 (124)
T 2daz_A 50 RMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIKTA-PSKVKLVFIR-NED 112 (124)
T ss_dssp SCCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHHHHS-CSEEEEEEEE-CTT
T ss_pred cCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEe-CCC
Confidence 3599999999999999999 99999999999999965 67776666554 4689999999 544
No 255
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=98.71 E-value=2.2e-08 Score=85.27 Aligned_cols=59 Identities=17% Similarity=0.322 Sum_probs=53.3
Q ss_pred CceEEeEECCCCccccCC-CCCCCEEEEECCEeeC--CHHHHHHHHhcC-CCCeEEEEEEECCC
Q 013444 368 SGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQ--SITEIIEIMGDR-VGEPLKVVVQRAND 427 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~--s~~dl~~~l~~~-~g~~v~l~v~R~~g 427 (443)
.|++|..|.++|||+++| |++||+|++|||++|. ++.++.++|... .|+.+.|+|.| +.
T Consensus 43 ~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R-~~ 105 (129)
T 2kpk_A 43 EFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCR-GY 105 (129)
T ss_dssp EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTEEEEEEEEE-CS
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEe-CC
Confidence 589999999999999999 9999999999999998 578999988874 48899999999 44
No 256
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.71 E-value=1e-08 Score=83.35 Aligned_cols=57 Identities=28% Similarity=0.425 Sum_probs=50.2
Q ss_pred CceEEeEECCCCccccCCCCCCCEEEEECCEeeC--CHHHHHHHHhcCCCCeEEEEEEEC
Q 013444 368 SGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPLKVVVQRA 425 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~--s~~dl~~~l~~~~g~~v~l~v~R~ 425 (443)
.+++|..|.++|||+++||++||+|++|||++|. ++.++.+++... ++++.|+|.|.
T Consensus 36 ~~~~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~-~~~v~l~v~R~ 94 (100)
T 1whd_A 36 SPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRSC-PSEIILLVWRV 94 (100)
T ss_dssp SSCBCCBCCTTSHHHHHTCCSSCEEEEETTEECTTCCHHHHHHHHHHC-SSEEEEEEEEC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEEC
Confidence 5789999999999999999999999999999998 468888888764 45699999993
No 257
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=98.70 E-value=2.6e-08 Score=79.61 Aligned_cols=57 Identities=23% Similarity=0.420 Sum_probs=52.3
Q ss_pred CCceEEeEECCCCccccCC-CCCCCEEEEECCEee--CCHHHHHHHHhcCCCCeEEEEEEE
Q 013444 367 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPV--QSITEIIEIMGDRVGEPLKVVVQR 424 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V--~s~~dl~~~l~~~~g~~v~l~v~R 424 (443)
..+++|..|.+++||+++| |++||+|++|||+++ .+++++.+++....+ ++.|+|.|
T Consensus 27 ~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~-~v~l~v~~ 86 (93)
T 3o46_A 27 TGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQSQG-AITFKIIP 86 (93)
T ss_dssp TCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHHHCCE-EEEEEEEC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC-eEEEEEEe
Confidence 4689999999999999999 999999999999999 899999999977555 89999988
No 258
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=98.70 E-value=2.7e-08 Score=84.99 Aligned_cols=57 Identities=26% Similarity=0.459 Sum_probs=52.6
Q ss_pred CceEEeEECCCCccccCC-CCCCCEEEEECCEeeCC--HHHHHHHHhcC-CCCeEEEEEEE
Q 013444 368 SGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDR-VGEPLKVVVQR 424 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s--~~dl~~~l~~~-~g~~v~l~v~R 424 (443)
.|++|..|.+++||+++| |++||+|++|||+++.+ ++++.++|... .++.+.|+|.|
T Consensus 65 ~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R 125 (131)
T 1wfg_A 65 LCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILESKPEPQVELVVSR 125 (131)
T ss_dssp EEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHHHHHHHHTSSSSEEEEEEEE
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEc
Confidence 489999999999999999 99999999999999964 68999988874 78899999999
No 259
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.70 E-value=1.3e-08 Score=82.79 Aligned_cols=59 Identities=20% Similarity=0.363 Sum_probs=50.6
Q ss_pred CceEEeEECCCCccccC-CCCCCCEEEEECCEeeCCH-HHHHHHHhcCCCCeEEEEEEECCCe
Q 013444 368 SGVLVPVVTPGSPAHLA-GFLPSDVVIKFDGKPVQSI-TEIIEIMGDRVGEPLKVVVQRANDQ 428 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~a-Gl~~GDiI~~vng~~V~s~-~dl~~~l~~~~g~~v~l~v~R~~g~ 428 (443)
.+++|.+|.++|||+++ ||++||+|++|||+++.++ .++...+... ++.+.|+|.| +++
T Consensus 35 ~~v~V~~V~~~spA~~agGL~~GD~I~~ing~~v~~~~~~~~~~~~~~-~~~v~l~v~R-~~~ 95 (100)
T 2edp_A 35 EPLTVSKIEDGGKAALSQKMRTGDELVNINGTPLYGSRQEALILIKGS-FRILKLIVRR-RNS 95 (100)
T ss_dssp EEEEECCCCTTSHHHHHTSCCTTCEEEEETTEECCSCSHHHHHHHHTC-CSSCEEEEEE-CCC
T ss_pred CCeEEEEECCCCHHHHcCCCCCCCEEEEECCEEccchHHHHHHHHHhC-CCeEEEEEEe-CCC
Confidence 57999999999999999 9999999999999999884 5666666653 6889999999 554
No 260
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.69 E-value=4.9e-09 Score=89.01 Aligned_cols=60 Identities=27% Similarity=0.485 Sum_probs=54.2
Q ss_pred CCceEEeEECCCCccccCCCCCCCEEEEECCEeeC--CHHHHHHHHhcCCCCeEEEEEEECCCe
Q 013444 367 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPLKVVVQRANDQ 428 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~--s~~dl~~~l~~~~g~~v~l~v~R~~g~ 428 (443)
..|++|..|.++|||+++||++||+|++|||++|. +++++.++|... ++++.|+|.| +++
T Consensus 60 ~~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~r-~~~ 121 (126)
T 2yuy_A 60 MDTIFVKQVKEGGPAFEAGLCTGDRIIKVNGESVIGKTYSQVIALIQNS-DTTLELSVMP-KDS 121 (126)
T ss_dssp CCCCCBCCCCSSSHHHHHTCCSSCCCCEETTEECSSCCHHHHHHHHHTC-TTEEEEECCC-CCC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCEEEEEEEE-CCC
Confidence 36899999999999999999999999999999998 999999988864 8899999999 443
No 261
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=98.69 E-value=8.1e-08 Score=97.07 Aligned_cols=71 Identities=24% Similarity=0.442 Sum_probs=62.5
Q ss_pred CCceEEeEECCCCccccCCCCCCCEEEEECCEeeCCH--HHHHHHHhcCCCCeEEEEEEECCCe---EEEEEEEecC
Q 013444 367 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSI--TEIIEIMGDRVGEPLKVVVQRANDQ---LVTLTVIPEE 438 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s~--~dl~~~l~~~~g~~v~l~v~R~~g~---~~~l~v~~~~ 438 (443)
..+++|..|.++|||+++||++||+|++|||++|.++ +++..++....|+++.|+|.| +++ .+++++++.+
T Consensus 98 ~~~~~V~~v~~~spA~~aGl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~r-~g~~~~~~~~~l~r~~ 173 (388)
T 1fc6_A 98 GKDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGMSLYDVSDLLQGEADSQVEVVLHA-PGAPSNTRTLQLTRQK 173 (388)
T ss_dssp SSCEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHCBSTTCEEEEEEEE-TTEEEEEEEEEEECBC
T ss_pred CCcEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEEEe-CCCCcceEEEEEEEce
Confidence 3689999999999999999999999999999999986 788888887889999999999 565 6777777653
No 262
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.69 E-value=2.4e-08 Score=79.62 Aligned_cols=53 Identities=15% Similarity=0.284 Sum_probs=48.5
Q ss_pred EEeEECCCCccccCCCCCCCEEEEECCEee--CCHHHHHHHHhcCCCCeEEEEEEE
Q 013444 371 LVPVVTPGSPAHLAGFLPSDVVIKFDGKPV--QSITEIIEIMGDRVGEPLKVVVQR 424 (443)
Q Consensus 371 ~V~~v~~~spA~~aGl~~GDiI~~vng~~V--~s~~dl~~~l~~~~g~~v~l~v~R 424 (443)
+|.+|.++|||+++||++||+|++|||++| .++.++.+++... ++++.|+|.+
T Consensus 34 ~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~p 88 (90)
T 1y7n_A 34 IICSLMRGGIAERGGVRVGHRIIEINGQSVVATPHEKIVHILSNA-VGEIHMKTMP 88 (90)
T ss_dssp EEEEECTTSHHHHHTCCSSCEEEEETTEECTTSCHHHHHHHHHHC-CEEEEEEEEC
T ss_pred EEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEE
Confidence 899999999999999999999999999999 5899999988754 7889999886
No 263
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=98.69 E-value=7.5e-09 Score=87.62 Aligned_cols=60 Identities=13% Similarity=0.292 Sum_probs=52.2
Q ss_pred CCceEEeEECCCCccccCC-CCCCCEEEEECCEeeC--CHHHHHHHHhcCCCCeEEEEEEECCC
Q 013444 367 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPLKVVVQRAND 427 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~--s~~dl~~~l~~~~g~~v~l~v~R~~g 427 (443)
..+++|..|.++|||+++| |++||+|++|||+++. ++.++..++.... +++.|+|.|.++
T Consensus 44 ~~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~r~~~ 106 (125)
T 3hpk_A 44 CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVK-GEVTIHYNKLQA 106 (125)
T ss_dssp CSSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHSC-SEEEEEEEEECS
T ss_pred CCCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEECCC
Confidence 3589999999999999999 9999999999999998 7889998887754 459999988433
No 264
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.68 E-value=9.4e-09 Score=83.72 Aligned_cols=60 Identities=20% Similarity=0.379 Sum_probs=51.8
Q ss_pred CCceEEeEECCCCccccCC-CCCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEECCCe
Q 013444 367 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQ 428 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R~~g~ 428 (443)
..|++|..|.++|||+++| |++||+|++|||+++.+ +.++..++. ..++++.|+|.| +++
T Consensus 35 ~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~-~~g~~v~l~v~R-~~~ 97 (103)
T 1wfv_A 35 KMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIK-SGGRRVRLLLKR-GTG 97 (103)
T ss_dssp TEEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHH-HHCSEECEEEEC-TTC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH-cCCCeEEEEEEE-CCC
Confidence 3589999999999999999 99999999999999987 567777666 457899999999 543
No 265
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=98.68 E-value=4.3e-08 Score=77.82 Aligned_cols=57 Identities=18% Similarity=0.356 Sum_probs=49.6
Q ss_pred CCceEEeEECCCCccccC-CCCCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEE
Q 013444 367 KSGVLVPVVTPGSPAHLA-GFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQR 424 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~a-Gl~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R 424 (443)
..|++|.+|.++|||+++ ||++||+|++|||+++.+ +.++...+.. .++++.|+|.|
T Consensus 29 ~~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~~~~~~~~-~~~~v~l~v~r 88 (90)
T 1qav_A 29 KMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKK-TGKEVVLEVKY 88 (90)
T ss_dssp TEEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHHHHHHHHT-CCSEEEEEEEE
T ss_pred CCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh-CCCeEEEEEEE
Confidence 358999999999999999 999999999999999975 6667676665 46789999988
No 266
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=98.68 E-value=2.2e-08 Score=80.66 Aligned_cols=57 Identities=14% Similarity=0.318 Sum_probs=47.5
Q ss_pred CceEEeEECCCCccccCC-CCCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEEC
Q 013444 368 SGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRA 425 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R~ 425 (443)
.|++|.+|.++|||+++| |++||+|++|||++|.+ ..+...++. ..++++.|+|.|.
T Consensus 31 ~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~-~~~~~v~l~v~R~ 90 (96)
T 2qkv_A 31 IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALFK-GANGKVSMEVTRP 90 (96)
T ss_dssp SSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHH-TCSSEEEEEEECC
T ss_pred CcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHh-cCCCcEEEEEEeC
Confidence 589999999999999999 99999999999999976 344444444 4556899999983
No 267
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.68 E-value=1.8e-08 Score=92.17 Aligned_cols=57 Identities=21% Similarity=0.274 Sum_probs=51.3
Q ss_pred CCceEEeEECCCCccccC-CCCCCCEEEEECCEeeCCH--HHHHHHHhcCCCCeEEEEEEE
Q 013444 367 KSGVLVPVVTPGSPAHLA-GFLPSDVVIKFDGKPVQSI--TEIIEIMGDRVGEPLKVVVQR 424 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~a-Gl~~GDiI~~vng~~V~s~--~dl~~~l~~~~g~~v~l~v~R 424 (443)
..|++|..|.++|||+++ ||++||+|++|||+++.++ .++..++.. .++++.|+|.|
T Consensus 32 ~~~~~V~~v~~~spA~~aggl~~GD~I~~vng~~v~~~~~~~~~~~~~~-~g~~v~l~v~R 91 (200)
T 2qt5_A 32 DGKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHDEIISLLKN-VGERVVLEVEY 91 (200)
T ss_dssp SSCSEEEEECTTSHHHHTTSCCTTCEEEEETTEECTTSCHHHHHHHHHT-CCSEEEEEEEE
T ss_pred CCCeEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh-CCCeEEEEEec
Confidence 468999999999999999 9999999999999999999 888876654 47899999999
No 268
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.67 E-value=2e-08 Score=82.70 Aligned_cols=58 Identities=16% Similarity=0.287 Sum_probs=52.8
Q ss_pred CCceEEeEECCCCccccCC-CCCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEE
Q 013444 367 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQR 424 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R 424 (443)
..|++|..|.+++||+++| |++||+|++|||+++.+ ++++..++....++++.|+|.|
T Consensus 43 ~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v~l~v~R 103 (108)
T 2d92_A 43 RSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILKAVPPGLVHLGICS 103 (108)
T ss_dssp CEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHHHSCSEEEEEEEEC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEc
Confidence 4689999999999999999 99999999999999964 8899999988666789999998
No 269
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=98.67 E-value=2.2e-08 Score=83.86 Aligned_cols=57 Identities=18% Similarity=0.441 Sum_probs=48.6
Q ss_pred CceEEeEECCCCccccCC-CCCCCEEEEECCEeeCCHHHHHHH-HhcCCCCeEEEEEEE
Q 013444 368 SGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQSITEIIEI-MGDRVGEPLKVVVQR 424 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s~~dl~~~-l~~~~g~~v~l~v~R 424 (443)
.|++|..|.++|||+++| |++||+|++|||+++.++.+.... +....++++.|+|.|
T Consensus 38 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r 96 (119)
T 1tp5_A 38 EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQY 96 (119)
T ss_dssp CCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHTSCSEEEEEEEE
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEE
Confidence 599999999999999999 999999999999999988544332 223467899999999
No 270
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=98.67 E-value=2.3e-08 Score=85.02 Aligned_cols=56 Identities=23% Similarity=0.424 Sum_probs=52.5
Q ss_pred CceEEeEECCCCccccCC-CCCCCEEEEECCEeeC---CHHHHHHHHhcCCCCeEEEEEEE
Q 013444 368 SGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQ---SITEIIEIMGDRVGEPLKVVVQR 424 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~---s~~dl~~~l~~~~g~~v~l~v~R 424 (443)
.|++|..|.+++||+++| |++||+|++|||++|. ++.++..++.. .++.+.|+|.|
T Consensus 54 ~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~~-~~~~v~l~v~r 113 (128)
T 2db5_A 54 VDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALLQQ-TTGSLRLIVAR 113 (128)
T ss_dssp EEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHHH-CCSEEEEEEEE
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHHHc-CCCeEEEEEEc
Confidence 589999999999999999 9999999999999998 89999988876 67899999999
No 271
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.66 E-value=1.4e-08 Score=85.10 Aligned_cols=62 Identities=23% Similarity=0.323 Sum_probs=52.8
Q ss_pred CceEEeEECCCCccccC-CCCCCCEEEEECCEeeCC--HHHHHHHHhcC---CCCeEEEEEEECCCeE
Q 013444 368 SGVLVPVVTPGSPAHLA-GFLPSDVVIKFDGKPVQS--ITEIIEIMGDR---VGEPLKVVVQRANDQL 429 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~a-Gl~~GDiI~~vng~~V~s--~~dl~~~l~~~---~g~~v~l~v~R~~g~~ 429 (443)
..++|.+|.+++||+++ ||++||+|++|||+++.+ ++++.++|... .|++++|+|.|...+.
T Consensus 43 ~~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~~g~~v~l~v~r~~~~~ 110 (118)
T 1v6b_A 43 GKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKAWNQGGDWIDLVVAVCPPKE 110 (118)
T ss_dssp CSEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHHHHHHHTCSEEEEEEECCCSCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhhcCCCeEEEEEEeCCccc
Confidence 35999999999999999 999999999999999987 78888877652 4889999999944343
No 272
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.66 E-value=4.2e-08 Score=82.34 Aligned_cols=60 Identities=20% Similarity=0.447 Sum_probs=51.9
Q ss_pred CCceEEeEECCCCccccCC-CCCCCEEEEECCEeeCCH--HHHHHHHhcCCCCeEEEEEEECCCe
Q 013444 367 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQSI--TEIIEIMGDRVGEPLKVVVQRANDQ 428 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s~--~dl~~~l~~~~g~~v~l~v~R~~g~ 428 (443)
..|++|.+|.+++||+++| |++||+|++|||++|.++ .++..++... ++.+.|+|.| ++.
T Consensus 46 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~-g~~v~l~v~R-~~~ 108 (120)
T 2eno_A 46 DSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNA-GYAVSLRVQH-RLQ 108 (120)
T ss_dssp CCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHHHHHHHHHH-CSEEEEEEEE-EEE
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEe-CCc
Confidence 4699999999999999999 999999999999999884 5777777653 7789999999 444
No 273
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=98.65 E-value=6.5e-08 Score=82.75 Aligned_cols=57 Identities=23% Similarity=0.311 Sum_probs=51.4
Q ss_pred CCceEEeEECCCCccccCCCCCCCEEEEECCEeeC--CHHHHHHHHhcCCCCeEEEEEEE
Q 013444 367 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPLKVVVQR 424 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~--s~~dl~~~l~~~~g~~v~l~v~R 424 (443)
..|++|..|.++|||+++||++||+|++|||++|. ++.++..++.. .++.+.|+|.|
T Consensus 64 ~~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~~~~~l~~-~g~~v~l~v~~ 122 (132)
T 3l4f_D 64 PALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQ-GGNTLMVKVVM 122 (132)
T ss_dssp CCSEEEEEECTTSGGGGGTCCTTCEEEEESSSBCTTSCHHHHHHHHHH-TTTEEEEEEEC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCEEEEEEEE
Confidence 45899999999999999999999999999999998 57788887776 67899999998
No 274
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.64 E-value=7.9e-08 Score=78.90 Aligned_cols=57 Identities=25% Similarity=0.452 Sum_probs=50.2
Q ss_pred CCceEEeEECCCCccccC-CCCCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEE
Q 013444 367 KSGVLVPVVTPGSPAHLA-GFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQR 424 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~a-Gl~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R 424 (443)
..|++|..|.+++||+++ ||++||+|++|||++|.+ +.++..++.. .++++.|+|.|
T Consensus 40 ~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~R 99 (107)
T 1uhp_A 40 SEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQAVEAFKT-AKEPIVVQVLR 99 (107)
T ss_dssp SCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCHHHHHHHHHH-CCSSEEEEEEE
T ss_pred CCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCcEEEEEEe
Confidence 469999999999999999 999999999999999965 6677777765 46789999999
No 275
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=98.63 E-value=4.1e-08 Score=77.79 Aligned_cols=56 Identities=25% Similarity=0.385 Sum_probs=50.7
Q ss_pred CceEEeEECCCCccccCC-CCCCCEEEEECCEee--CCHHHHHHHHhcCCCCeEEEEEEE
Q 013444 368 SGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPV--QSITEIIEIMGDRVGEPLKVVVQR 424 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V--~s~~dl~~~l~~~~g~~v~l~v~R 424 (443)
.|++|.+|.++|||+++| |++||+|++|||+++ .+++++.+++.... .++.|++.+
T Consensus 21 ~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~-~~v~L~v~~ 79 (88)
T 3e17_A 21 SQIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKSR-GKLQLVVLR 79 (88)
T ss_dssp EEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHTT-TEEEEEECC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEeC
Confidence 489999999999999999 999999999999999 78999999888754 478888876
No 276
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.63 E-value=4.1e-08 Score=80.62 Aligned_cols=57 Identities=23% Similarity=0.397 Sum_probs=50.6
Q ss_pred CCceEEeEECCCCccccCC-CCCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEE
Q 013444 367 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQR 424 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R 424 (443)
..|++|..|.+++||+++| |++||+|++|||+++.+ +.++..++.. .++++.|+|.|
T Consensus 39 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~R 98 (107)
T 1wf8_A 39 KLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRN-TKGNVRFVIGR 98 (107)
T ss_dssp EEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHHHHHHHH-CCSEEEEEEEE
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc-CCCeEEEEEEe
Confidence 4699999999999999999 99999999999999974 7777776765 47899999999
No 277
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=98.63 E-value=4e-08 Score=89.05 Aligned_cols=61 Identities=11% Similarity=0.254 Sum_probs=54.7
Q ss_pred CCceEEeEECCCCccccCC-CCCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEECCCeE
Q 013444 367 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQL 429 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R~~g~~ 429 (443)
..|++|..|.++|||+++| |++||+|++|||++|.+ |.++..++.. .++.+.|+|.| ++..
T Consensus 129 ~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~-~~~~v~l~v~R-~~~~ 192 (196)
T 3gsl_A 129 DNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKN-TYDVVYLKVAK-PSNA 192 (196)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCBHHHHHHHHHS-CCEEEEEEEEE-ESCC
T ss_pred CCCEEEEEECCCChHHhcCCCCCCCEEEEECCCcCCCCCHHHHHHHHHc-CCCeEEEEEeC-CCCc
Confidence 4689999999999999999 99999999999999998 9999998865 47889999999 5543
No 278
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=98.63 E-value=3.2e-08 Score=81.34 Aligned_cols=57 Identities=14% Similarity=0.329 Sum_probs=47.6
Q ss_pred CceEEeEECCCCccccCC-CCCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEEC
Q 013444 368 SGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRA 425 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R~ 425 (443)
.|++|.+|.++|||+++| |++||+|++|||++|.+ ..+...++.. .++++.|+|.|.
T Consensus 25 ~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~-~~~~v~l~v~R~ 84 (106)
T 2la8_A 25 IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKG-ANGKVSMEVTRP 84 (106)
T ss_dssp SSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHHS-CBSCEEEEEEEC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhC-CCCeEEEEEEeC
Confidence 689999999999999999 99999999999999975 3444444444 456799999993
No 279
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=98.63 E-value=5.7e-08 Score=88.50 Aligned_cols=59 Identities=17% Similarity=0.389 Sum_probs=54.4
Q ss_pred CCceEEeEECCCCccccCCCCCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEECCCe
Q 013444 367 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRANDQ 428 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R~~g~ 428 (443)
..|++|..|.++|||+++||++||+|++|||++|.+ ++++..++.. |+.+.|+|.| +|+
T Consensus 109 ~~~~~V~~V~~gspA~~aGL~~GD~Il~vng~~v~~~~~~~~~~~l~~--~~~v~l~v~r-~g~ 169 (192)
T 3k1r_A 109 GCGLFISHLIKGGQADSVGLQVGDEIVRINGYSISSCTHEEVINLIRT--EKTVSIKVRH-IGL 169 (192)
T ss_dssp TEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHTS--SSEEEEEEEE-CCE
T ss_pred CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHcC--CCeEEEEEEE-CCc
Confidence 358999999999999999999999999999999998 9999998877 8899999999 665
No 280
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=98.63 E-value=6.2e-08 Score=87.77 Aligned_cols=60 Identities=17% Similarity=0.331 Sum_probs=50.7
Q ss_pred CCceEEeEECCCCccccCC-CCCCCEEEEECCEeeCCHHHHHHHH-hcCCCCeEEEEEEECCC
Q 013444 367 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQSITEIIEIM-GDRVGEPLKVVVQRAND 427 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s~~dl~~~l-~~~~g~~v~l~v~R~~g 427 (443)
..|++|.+|.++|||+++| |++||+|++|||+++.+|.+..... ....++.+.++|.| ++
T Consensus 34 ~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~r-~~ 95 (196)
T 3gsl_A 34 DPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMR-RK 95 (196)
T ss_dssp CCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCSEEEEEEEE-EC
T ss_pred CCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEe-cC
Confidence 4699999999999999999 9999999999999999886654432 23468899999999 44
No 281
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.63 E-value=2.7e-08 Score=80.20 Aligned_cols=57 Identities=23% Similarity=0.507 Sum_probs=49.7
Q ss_pred CCceEEeEECCCCccccCCCCCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEEC
Q 013444 367 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRA 425 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R~ 425 (443)
..+++|.+|.+++||+ +||++||+|++|||++|.+ +.++...+.. .++++.|+|.|+
T Consensus 30 ~~~~~V~~V~~~spA~-agL~~GD~Il~ing~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~ 88 (96)
T 2edv_A 30 SLPLTVVAVTAGGSAH-GKLFPGDQILQMNNEPAEDLSWERAVDILRE-AEDSLSITVVRC 88 (96)
T ss_dssp SSSCBCCCBCSSSSST-TTSCTTCBEEEESSCBSTTCCHHHHHHHHHH-CSSCEEEEEEEC
T ss_pred CCCeEEEEECCCCchh-hCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEEC
Confidence 3589999999999996 9999999999999999976 6777776765 688999999993
No 282
>3mmg_A Nuclear inclusion protein A; 3C-type protease, TEV, TVMV, viral protein, hydrolase; 1.70A {Tobacco vein mottling virus} SCOP: b.47.1.0
Probab=98.63 E-value=3.1e-06 Score=78.42 Aligned_cols=164 Identities=18% Similarity=0.222 Sum_probs=105.2
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEE----EEeecCC
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGT----VLNADFH 209 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~dg~~~~a~----vv~~d~~ 209 (443)
+...|..++-..+... ..--|+.++ .||+|++|.++.. ++.++|....|.-.-.. .+..-+.
T Consensus 14 ia~~iC~l~n~sdg~~-----~~l~gigyG--~~iItn~HLf~rn-------ng~L~I~s~hG~f~v~nt~~lki~~i~g 79 (241)
T 3mmg_A 14 ISACVCLLENSSDGHS-----ERLFGIGFG--PYIIANQHLFRRN-------NGELTIKTMHGEFAVANSTQLQMKPVEG 79 (241)
T ss_dssp HHTTEEEEEEEETTEE-----EEEEEEEET--TEEEECGGGGSST-------TCEEEEEETTEEEEEEEGGGSCEEECTB
T ss_pred hhheEEEEEEEeCCCE-----EEEEEEeEC--CEEEEChhhcccC-------CCeEEEEECCceEEccCCCceeeEEeCC
Confidence 4456777764332211 223355554 4999999999864 35788888766432221 2444578
Q ss_pred CCEEEEEEcCCCCCCccccCC-CCCCCCCCEEEEEecCCCCCCceEEEEEEeeecCccCCCCCCccceEEEEcccCCCCC
Q 013444 210 SDIAIVKINSKTPLPAAKLGT-SSKLCPGDWVVAMGCPHSLQNTVTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAGN 288 (443)
Q Consensus 210 ~DlAlLkl~~~~~~~~~~l~~-s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~ 288 (443)
.||.|+++.. ++||.+-.. =..++.||+|+++|..+... .....|+........ ....++.+...+..|+
T Consensus 80 ~DiiiIrmPk--DfpPf~~kl~FR~P~~~E~V~lVg~~fq~k--~~~s~vSesS~i~p~-----~~~~fWkHwIsT~~G~ 150 (241)
T 3mmg_A 80 RDIIVIKMAK--DFPPFPQKLKFRQPTIKDRVCMVSTNFQQK--SVSSLVSESSHIVHK-----EDTSFWQHWITTKDGQ 150 (241)
T ss_dssp SSCEEEECCT--TSCCCCSCCCBCCCCTTCCEEEEEEEECSS--CEEEEEEEEECCEEC-----TTSSEEEECBCCCTTC
T ss_pred ccEEEEeCCC--CCCCcchhcccCCCCCCCeEEEEEeecccC--CccEEECCcceeEEc-----CCCCEEEEEcCCCCCc
Confidence 8999999964 444433211 25678999999999755422 222334433222111 1135778888899999
Q ss_pred ccceeeec-CCCEEEEEEEEeecCCCeEEEEeHH
Q 013444 289 SGGPLVNI-DGEIVGINIMKVAAADGLSFAVPID 321 (443)
Q Consensus 289 SGGPlvd~-~G~VVGI~s~~~~~~~g~~~aIPi~ 321 (443)
-|+|+|+. ||.+|||++..... ...+|+.|+.
T Consensus 151 CGlPlVs~~Dg~IVGiHsl~~~~-~~~N~F~~f~ 183 (241)
T 3mmg_A 151 AGSPLVSIIDGNILGIHSLTHTT-NGSNYFVEFP 183 (241)
T ss_dssp TTCEEEETTTCCEEEEEEEEETT-TCCEEEEECC
T ss_pred CCCeEEEcCCCcEEEEEecccCC-CCcEEEEcCC
Confidence 99999987 69999999987644 4578888775
No 283
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=98.62 E-value=5.5e-08 Score=79.26 Aligned_cols=57 Identities=19% Similarity=0.402 Sum_probs=49.9
Q ss_pred CCCceEEeEECCCCccccCCCCCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEE
Q 013444 366 VKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQR 424 (443)
Q Consensus 366 ~~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R 424 (443)
...|++|.+|.++|||++ ||++||+|++|||+++.+ +.++...+. ..++++.|+|.|
T Consensus 41 ~~~gv~V~~V~~~spA~~-gL~~GD~I~~vng~~v~~~~~~~~~~~~~-~~g~~v~l~v~R 99 (103)
T 1n7t_A 41 DDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLK-TFQNTVELIIVR 99 (103)
T ss_dssp SCCSEECCCBSSSSTTSS-SCCTTCEEEEETTEECSSCCHHHHHHHHH-HCCSEEEEEEEC
T ss_pred CCCCEEEEEECCCCchHH-CCCCCCEEEEECCEECCCCCHHHHHHHhh-cCCCeEEEEEEe
Confidence 356999999999999999 999999999999999977 666666665 457899999998
No 284
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=98.62 E-value=6.1e-08 Score=99.88 Aligned_cols=65 Identities=29% Similarity=0.363 Sum_probs=59.8
Q ss_pred CceEEeEECCCCccccCCCCCCCEEEEECCEeeCCHHHHHHHHhcCCCCeEEEEEEECCCeEEEEEE
Q 013444 368 SGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEIIEIMGDRVGEPLKVVVQRANDQLVTLTV 434 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s~~dl~~~l~~~~g~~v~l~v~R~~g~~~~l~v 434 (443)
.|++|.+|.++|||+++||++||+|++|||++|.+++|+.+++.. .++.+.|+|.| +++.+.+.+
T Consensus 386 ~Gv~V~~V~~gspA~~aGL~~GD~I~~Vng~~v~~~~~~~~~l~~-~~~~v~l~v~R-~g~~~~v~l 450 (451)
T 3pv2_A 386 IGVQVVGASENSAGWRAGIRPGDIIISANKKPVTDVKSLQTIAQE-KKKELLVQVLR-GPGSMYLLV 450 (451)
T ss_dssp EEEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHHHHHTTS-SCSCEEEEEEE-TTEEEEEEE
T ss_pred CceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHhc-CCCeEEEEEEE-CCEEEEEEe
Confidence 589999999999999999999999999999999999999998877 67789999999 888777765
No 285
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.62 E-value=2.9e-08 Score=81.32 Aligned_cols=59 Identities=27% Similarity=0.441 Sum_probs=50.3
Q ss_pred CCceEEeEECCCCccccCCCCCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEECC
Q 013444 367 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRAN 426 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R~~ 426 (443)
..|++|..|.++|||+++||++||+|++|||+++.+ +.++...+.. .++++.++|.|.+
T Consensus 31 ~~g~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~r~~ 91 (106)
T 2eei_A 31 KKGVYMTDITPQGVAMRAGVLADDHLIEVNGENVEDASHEEVVEKVKK-SGSRVMFLLVDKE 91 (106)
T ss_dssp CCSCEECCCCTTSHHHHHTCCSSEEEEEETTEECTTCCHHHHHHHHHH-HCSEEEEEECCTT
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHh-CCCeEEEEEEcCc
Confidence 358999999999999999999999999999999974 5777776654 3678999999843
No 286
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.62 E-value=1.3e-08 Score=84.24 Aligned_cols=58 Identities=19% Similarity=0.385 Sum_probs=52.7
Q ss_pred CCCceEEeEECCCCccccCC-CCCCCEEEEECCEeeC--CHHHHHHHHhcCCCCeEEEEEEE
Q 013444 366 VKSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPLKVVVQR 424 (443)
Q Consensus 366 ~~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~--s~~dl~~~l~~~~g~~v~l~v~R 424 (443)
...|++|.+|.+++||+++| |++||+|++|||++|. ++.++..++.. .++++.|+|.|
T Consensus 42 ~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~-~g~~v~l~v~r 102 (111)
T 1uju_A 42 TDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQLLRS-VGDTLTVLVCD 102 (111)
T ss_dssp TCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHHHHHSS-CSSEEEECCCC
T ss_pred CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEE
Confidence 35699999999999999999 9999999999999998 78888888866 67899999998
No 287
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.60 E-value=6.9e-08 Score=88.08 Aligned_cols=60 Identities=20% Similarity=0.374 Sum_probs=54.8
Q ss_pred CCceEEeEECCCCccccCC-CCCCCEEEEECCEeeC--CHHHHHHHHhcC-CCCeEEEEEEECCC
Q 013444 367 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQ--SITEIIEIMGDR-VGEPLKVVVQRAND 427 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~--s~~dl~~~l~~~-~g~~v~l~v~R~~g 427 (443)
..+++|..|.++|||+++| |++||+|++|||+++. +|.++..++... .|+++.|+|.| ++
T Consensus 35 ~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R-~~ 98 (196)
T 1p1d_A 35 SSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSSITSKVTLEIEF-DV 98 (196)
T ss_dssp SCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHHHTCCSSSEEEEEEEE-CS
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEe-cC
Confidence 3589999999999999999 9999999999999999 789999999875 48899999999 55
No 288
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=98.60 E-value=3e-08 Score=84.25 Aligned_cols=59 Identities=19% Similarity=0.374 Sum_probs=52.7
Q ss_pred CceEEeEECCCCccccCC-CCCCCEEEEECCEeeCC--HHHHHHHHhcC------CCCeEEEEEEECCC
Q 013444 368 SGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDR------VGEPLKVVVQRAND 427 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s--~~dl~~~l~~~------~g~~v~l~v~R~~g 427 (443)
.|++|..|.+++||+++| |++||+|++|||+.+.+ +.++..+|... .++++.|+|.| ++
T Consensus 55 ~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~g~~~~~v~l~v~R-~~ 122 (127)
T 1wg6_A 55 LGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRSMSMEGNIRGMIQLVILR-RS 122 (127)
T ss_dssp EEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHHHHHHHHHHHTCEEEEEEEE-CS
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhccccCCCCEEEEEEEe-CC
Confidence 589999999999999999 99999999999999977 77888888753 57899999999 44
No 289
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.60 E-value=6.1e-08 Score=88.44 Aligned_cols=72 Identities=17% Similarity=0.315 Sum_probs=61.6
Q ss_pred eecCceeecccHHHHHHhhcCCCCCCCCCCceEEeEECCCCccccCC-CCCCCEEEEECCEeeCC--HHHHHHHHhcCCC
Q 013444 339 PWLGLKMLDLNDMIIAQLKERDPSFPNVKSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVG 415 (443)
Q Consensus 339 p~lGi~~~~~~~~~~~~l~~~~~~~~~~~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s--~~dl~~~l~~~~g 415 (443)
..||+.+...+.. ....|++|.+|.++|||+++| |++||+|++|||+++.+ ++++.+++... +
T Consensus 119 ~~lG~~~~~~~~~-------------~~~~gv~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~-~ 184 (196)
T 1p1d_A 119 VELGITISSPSSR-------------KPGDPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDSCSMEDAVQILQQC-E 184 (196)
T ss_dssp CCCCCEEECSCSS-------------STTCCCEEEECCSSSHHHHTSCCCTTCEEEEETTEEGGGCCHHHHHHHHHHC-T
T ss_pred CCcCEEEECCCCC-------------CCCCCEEEEEECCCCcHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-C
Confidence 3578887654321 113689999999999999999 99999999999999999 99999999877 8
Q ss_pred CeEEEEEEE
Q 013444 416 EPLKVVVQR 424 (443)
Q Consensus 416 ~~v~l~v~R 424 (443)
+.+.|+|.|
T Consensus 185 ~~v~l~v~R 193 (196)
T 1p1d_A 185 DLVKLKIRK 193 (196)
T ss_dssp TCEEEEEEC
T ss_pred CEEEEEEEe
Confidence 899999999
No 290
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.60 E-value=6.7e-08 Score=82.40 Aligned_cols=58 Identities=17% Similarity=0.354 Sum_probs=53.3
Q ss_pred CCceEEeEECCCCccccC-CCCCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEE
Q 013444 367 KSGVLVPVVTPGSPAHLA-GFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQR 424 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~a-Gl~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R 424 (443)
..+++|..|.+++||+++ ||++||+|++|||+.+.+ ++++.++|....+..+.|+|.|
T Consensus 56 ~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v~l~v~r 116 (130)
T 1i16_A 56 DKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKALPDGPVTIVIRR 116 (130)
T ss_dssp CCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHHTSCSSEEEEEEEE
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCceEEEEEEe
Confidence 358999999999999999 999999999999999986 7899999988777889999999
No 291
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=98.59 E-value=3.8e-08 Score=80.39 Aligned_cols=55 Identities=20% Similarity=0.381 Sum_probs=49.5
Q ss_pred CCceEEeEECCCCccccCCCCCCCEEEEECCEeeC--CHHHHHHHHhcCCCCeEEEEE
Q 013444 367 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPLKVVV 422 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~--s~~dl~~~l~~~~g~~v~l~v 422 (443)
..+++|..|.+++||+++||++||+|++|||++|. +++++.+++....+ ++.|+|
T Consensus 47 ~~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~-~v~l~v 103 (104)
T 2z17_A 47 EMFTLICKIQEDSPAHCAGLQAGDVLANINGVSTEGFTYKQVVDLIRSSGN-LLTIET 103 (104)
T ss_dssp SCCEEEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCHHHHHHHHHHTTT-EEEEEC
T ss_pred CCCeEEEEECCCChHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCC-cEEEEE
Confidence 46999999999999999999999999999999999 89999999987644 777765
No 292
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.59 E-value=2.8e-07 Score=83.69 Aligned_cols=70 Identities=21% Similarity=0.368 Sum_probs=56.1
Q ss_pred CCCceEEeEECCCCccccCCCCCCCEEEEECCEeeCCH--HHHHHHHhcCCCCeEEEEEEEC--CCeEEEEEEEec
Q 013444 366 VKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSI--TEIIEIMGDRVGEPLKVVVQRA--NDQLVTLTVIPE 437 (443)
Q Consensus 366 ~~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s~--~dl~~~l~~~~g~~v~l~v~R~--~g~~~~l~v~~~ 437 (443)
...|++|.+|.++|||++ ||++||+|++|||++|.+. .++...+... ++.+.|+|.|. +|+..++.+.+.
T Consensus 22 ~~~g~~V~~v~~~spA~~-gl~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~~~v~l~v~r~~~~G~~~~~~v~~~ 95 (195)
T 2qbw_A 22 DDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLKTF-QNTVELIIVREVGNGAKQEIRVRVE 95 (195)
T ss_dssp TCCSEEEEEECTTSTTTT-TCCTTCEEEEETTEECTTCCHHHHHHHHHHC-CSEEEEEEEEECSSSCEEEEEEEEE
T ss_pred CCCCEEEEEECCCChHHh-CCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEEcCCCCCCceeEeEee
Confidence 357999999999999999 9999999999999999874 4555555543 45899999983 456666666654
No 293
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=98.59 E-value=9.1e-08 Score=75.32 Aligned_cols=56 Identities=20% Similarity=0.404 Sum_probs=48.1
Q ss_pred CceEEeEECCCCcccc-CCCCCCCEEEEECCEeeC--CHHHHHHHHhcCCCCeEEEEEEE
Q 013444 368 SGVLVPVVTPGSPAHL-AGFLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPLKVVVQR 424 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~-aGl~~GDiI~~vng~~V~--s~~dl~~~l~~~~g~~v~l~v~R 424 (443)
.+++|.+|.++|||++ +||++||+|++|||+++. ++.++..++.. .++++.|+|.+
T Consensus 28 ~~~~V~~V~~gspA~~~agl~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~~ 86 (87)
T 4e34_A 28 VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQ-QRGEIEFEVVY 86 (87)
T ss_dssp EEEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHH-CCSEEEEEEEE
T ss_pred CCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEE
Confidence 5799999999999999 799999999999999994 66888887764 46678888764
No 294
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.58 E-value=9e-08 Score=79.89 Aligned_cols=58 Identities=24% Similarity=0.447 Sum_probs=50.9
Q ss_pred CCceEEeEECCCCccccCC-CCCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEEC
Q 013444 367 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRA 425 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R~ 425 (443)
..|++|..|.++|||+++| |++||+|++|||+++.+ +.++..++.. .++++.|+|.|.
T Consensus 49 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~-~g~~v~l~v~r~ 109 (117)
T 2ehr_A 49 LKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSEAVEAIKN-AGNPVVFIVQSL 109 (117)
T ss_dssp CCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHHHHHHHHHT-SCSSEEEEECCB
T ss_pred cCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEEC
Confidence 3699999999999999999 99999999999999966 6677777765 578899999983
No 295
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.58 E-value=4.8e-08 Score=79.86 Aligned_cols=57 Identities=16% Similarity=0.274 Sum_probs=50.4
Q ss_pred ceEEeEECCCCccccCC-CCCCCEEEEECCEeeCC--HHHHHHHHhcC----CCCeEEEEEEEC
Q 013444 369 GVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDR----VGEPLKVVVQRA 425 (443)
Q Consensus 369 g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s--~~dl~~~l~~~----~g~~v~l~v~R~ 425 (443)
+++|..|.+++||+++| |++||+|++|||+++.+ ++++.++|... .++++.+.|.|.
T Consensus 33 ~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~~~~~i~l~v~r~ 96 (103)
T 1ufx_A 33 LPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFKTKDRDYIDFLVTEF 96 (103)
T ss_dssp SCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHHHHCSSCSEEEEEECCC
T ss_pred cEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhcccCCCCeEEEEEEEc
Confidence 45899999999999999 99999999999999966 99998888653 678899999983
No 296
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=98.58 E-value=1e-07 Score=87.43 Aligned_cols=68 Identities=16% Similarity=0.279 Sum_probs=55.0
Q ss_pred CceEEeEECCCCccccCC-CCCCCEEEEECCEeeCC----HHHHHHHHhcCCCCeEEEEEEECCCe--EEEEEEEe
Q 013444 368 SGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS----ITEIIEIMGDRVGEPLKVVVQRANDQ--LVTLTVIP 436 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s----~~dl~~~l~~~~g~~v~l~v~R~~g~--~~~l~v~~ 436 (443)
.|++|.+|.++|||+++| |++||+|++|||++|.+ +.++..++....+.++.|+|.| +++ ...+++.+
T Consensus 45 ~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~~~~~~~v~l~v~R-~~~~~~~~~~v~l 119 (206)
T 3r0h_A 45 TGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLKVHQLFHTTYEKAVTLTVFR-ADPPELEKFNVDL 119 (206)
T ss_dssp SCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCHHHHHHHHHSCCSSEEEEEEEC-CSSCCEEEEEEEE
T ss_pred CCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccCHHHHHHHHHhcCCCceEEEEEe-cccCCCcEEEEEE
Confidence 589999999999999998 99999999999999998 7777777766555459999999 543 23444444
No 297
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.57 E-value=7.2e-08 Score=88.12 Aligned_cols=61 Identities=23% Similarity=0.486 Sum_probs=56.2
Q ss_pred CCceEEeEECCCCccccCC-CCCCCEEEEECCEeeC--CHHHHHHHHhcCCCCeEEEEEEECCCeE
Q 013444 367 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPLKVVVQRANDQL 429 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~--s~~dl~~~l~~~~g~~v~l~v~R~~g~~ 429 (443)
..|++|..|.++|||+++| |++||+|++|||++|. +++++.+++.. .++.+.|+|.| +++.
T Consensus 134 ~~g~~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~-~~~~v~l~v~R-~~~~ 197 (200)
T 2qt5_A 134 SRPVVITCVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQ-CGQEATLLIEY-DVSV 197 (200)
T ss_dssp CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT-TCSEEEEEEEE-EEEC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEE-CCcc
Confidence 3699999999999999999 9999999999999999 99999999987 78899999999 5554
No 298
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=98.55 E-value=1.2e-07 Score=77.77 Aligned_cols=57 Identities=23% Similarity=0.421 Sum_probs=48.8
Q ss_pred CceEEeEECCCCccccCC--CCCCCEEEEECCEeeCCH--HHHHHHHhcCC---CCeEEEEEEE
Q 013444 368 SGVLVPVVTPGSPAHLAG--FLPSDVVIKFDGKPVQSI--TEIIEIMGDRV---GEPLKVVVQR 424 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aG--l~~GDiI~~vng~~V~s~--~dl~~~l~~~~---g~~v~l~v~R 424 (443)
.+++|..|.++|||+++| |++||+|++|||++|.++ .++..++.... +..+.|+|.|
T Consensus 43 ~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~~~~~v~l~v~r 106 (107)
T 3nfk_A 43 MPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCERHSGELMLLVRP 106 (107)
T ss_dssp EEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHHHCGGGSBTTBEEEEEEC
T ss_pred CCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHHHhccccCCcEEEEEEEc
Confidence 589999999999999999 999999999999999855 66777776533 3589999987
No 299
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.53 E-value=3.6e-08 Score=82.58 Aligned_cols=60 Identities=23% Similarity=0.424 Sum_probs=50.8
Q ss_pred CceEEeEECCCCccccC--CCCCCCEEEEECCEeeCC--HHHHHHHHhcCC---CCeEEEEEEECCCe
Q 013444 368 SGVLVPVVTPGSPAHLA--GFLPSDVVIKFDGKPVQS--ITEIIEIMGDRV---GEPLKVVVQRANDQ 428 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~a--Gl~~GDiI~~vng~~V~s--~~dl~~~l~~~~---g~~v~l~v~R~~g~ 428 (443)
.|++|..|.++|||+++ ||++||+|++|||++|.+ +.++..++.... ++++.|+|.| +..
T Consensus 41 ~~v~V~~V~~~spA~~a~gGL~~GD~Il~ing~~v~~~~~~~~~~~~~~~~~~~~~~v~l~v~R-~~~ 107 (119)
T 2cs5_A 41 MPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCERHSGELMLLVRP-NAV 107 (119)
T ss_dssp EEEEEEEECSSSTTTSSSSCCCTTCEEEEETTBCTTSSCHHHHHHHHHHHHHCCSSCEEEEEEC-CCC
T ss_pred CCeEEEEECCCCHHHHhhcCCCCCCEEEEECCEECCCCCHHHHHHHHHhccccCCCEEEEEEEc-ccc
Confidence 48999999999999999 999999999999999975 677777776532 3689999999 543
No 300
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=98.51 E-value=1.7e-07 Score=83.64 Aligned_cols=57 Identities=23% Similarity=0.452 Sum_probs=52.0
Q ss_pred CCceEEeEECCCCccccCC-CCCCCEEEEECCEee--CCHHHHHHHHhcCCCCeEEEEEEE
Q 013444 367 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPV--QSITEIIEIMGDRVGEPLKVVVQR 424 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V--~s~~dl~~~l~~~~g~~v~l~v~R 424 (443)
..|++|..|.+++||+++| |++||+|++|||+.| .++.++..+|.. .++.+.|+|.|
T Consensus 110 ~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~l~~-~g~~v~L~V~R 169 (170)
T 3egg_C 110 KLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRN-TKGRVRFMIGR 169 (170)
T ss_dssp SBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHHHHHHHH-CCSEEEEEEEE
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCEEEEEEEe
Confidence 4689999999999999999 999999999999999 677888888876 67799999998
No 301
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=98.51 E-value=1.3e-07 Score=95.51 Aligned_cols=59 Identities=22% Similarity=0.376 Sum_probs=54.8
Q ss_pred CceEEeEECCCCccccCCCCCCCEEEEECCEeeCC--HHHHHHHHhc-CCCCeEEEEEEECCC
Q 013444 368 SGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQS--ITEIIEIMGD-RVGEPLKVVVQRAND 427 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s--~~dl~~~l~~-~~g~~v~l~v~R~~g 427 (443)
.|++|..|.++|||+++||++||+|++|||+++.+ ++++..++.. ..|++++|+|.| ++
T Consensus 31 ~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~e~~~~l~~~~~g~~v~l~v~r-~~ 92 (391)
T 3tsz_A 31 VGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQK-KK 92 (391)
T ss_dssp TEEEEEEECTTCHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEEEEEE-CH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhhcCCCeEEEEEee-CC
Confidence 69999999999999999999999999999999976 9999998887 789999999999 44
No 302
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=98.49 E-value=4.3e-07 Score=75.30 Aligned_cols=58 Identities=17% Similarity=0.363 Sum_probs=50.1
Q ss_pred CceEEeEECCCCccccCCCCCCCEEEEECCEeeC--CHHHHHHHHhc-CCCCeEEEEEEECCCe
Q 013444 368 SGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQ--SITEIIEIMGD-RVGEPLKVVVQRANDQ 428 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~--s~~dl~~~l~~-~~g~~v~l~v~R~~g~ 428 (443)
.|.+|..|.+ +++.+||++||+|++|||++|. +++|+.++|.. ..|+++.|+|.| ++.
T Consensus 34 ~g~~V~~I~~--~~~~aGL~~GD~Il~VNG~~v~~~~h~evv~~lk~~~~G~~v~L~V~R-~g~ 94 (113)
T 3soe_A 34 TGQKVKMILD--SQWCQGLQKGDIIKEIYHQNVQNLTHLQVVEVLKQFPVGADVPLLILR-GGP 94 (113)
T ss_dssp TEEEEEEESC--GGGSTTCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTCEEEEEEEE-SSC
T ss_pred CCcEEEEecC--hHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEEEEEE-CCc
Confidence 4667888877 6889999999999999999998 56799999987 568999999999 554
No 303
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=98.48 E-value=2.5e-07 Score=75.40 Aligned_cols=57 Identities=19% Similarity=0.411 Sum_probs=50.0
Q ss_pred CceEEeEECCCCcccc-CCCCCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEEC
Q 013444 368 SGVLVPVVTPGSPAHL-AGFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQRA 425 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~-aGl~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R~ 425 (443)
.|++|..|.++|||++ +||++||+|++|||+++.+ +.++..++.... +++.|+|.|.
T Consensus 35 ~~~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~~~ 94 (103)
T 2dc2_A 35 VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQR-GEIEFEVVYV 94 (103)
T ss_dssp EEEEEEEECTTSHHHHHTCCCSSEEEEEETTEESTTSCHHHHHHHHHHCC-SEEEEEEEEC
T ss_pred CCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CcEEEEEEec
Confidence 5899999999999999 4999999999999999954 888888887643 5899999984
No 304
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=97.87 E-value=1.6e-08 Score=84.04 Aligned_cols=55 Identities=20% Similarity=0.431 Sum_probs=45.6
Q ss_pred CceEEeEECCCCcccc-CCCCCCCEEEEECCEee--CCHHHHHHHHhcCCCCeEEEEEE
Q 013444 368 SGVLVPVVTPGSPAHL-AGFLPSDVVIKFDGKPV--QSITEIIEIMGDRVGEPLKVVVQ 423 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~-aGl~~GDiI~~vng~~V--~s~~dl~~~l~~~~g~~v~l~v~ 423 (443)
.|++|..|.++|||++ +||++||+|++|||++| .++.++..++... +++++|+|.
T Consensus 53 ~gv~V~~V~~~spA~~~aGL~~GD~Il~ING~~v~~~~~~~~~~~l~~~-~~~v~l~V~ 110 (112)
T 2lob_A 53 VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQ-RGEIEFEVV 110 (112)
Confidence 5899999999999999 99999999999999999 5577777777643 344776664
No 305
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.47 E-value=7.7e-09 Score=96.05 Aligned_cols=61 Identities=21% Similarity=0.443 Sum_probs=54.5
Q ss_pred CceEEeEECCCCccccCCCCCCCEEEEECCEeeC--CHHHHHHHHhcCCCCeE-EEEEEECCCeEE
Q 013444 368 SGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPL-KVVVQRANDQLV 430 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~--s~~dl~~~l~~~~g~~v-~l~v~R~~g~~~ 430 (443)
.|++|..|.+++||+++||++||+|++|||++|. +++++..++... |+.+ .|+|.| +|+..
T Consensus 33 ~gv~V~~V~~gSpA~~aGL~~GD~Il~VNG~~V~~~s~~dl~~~l~~~-g~~v~~l~V~R-~g~~~ 96 (216)
T 2krg_A 33 PGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAG-GDETKLLVVDR-ETDEF 96 (216)
T ss_dssp CSCBEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCTHHHHHHHHHH-CSEEEEEECCH-HHHHH
T ss_pred CCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhc-CCeEEEEEEEE-CCEEE
Confidence 4899999999999999999999999999999999 999999888765 7888 899988 66544
No 306
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.47 E-value=1.6e-07 Score=78.34 Aligned_cols=56 Identities=23% Similarity=0.473 Sum_probs=49.0
Q ss_pred CCceEEeEECCCCccccCCCCCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEE
Q 013444 367 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQR 424 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R 424 (443)
..|++|.+|.+++||+ +||++||+|++|||++|.+ +.++..++.. .++++.|+|.|
T Consensus 45 ~~gv~V~~V~~~spA~-~gL~~GD~I~~Vng~~v~~~~~~~~~~~l~~-~~~~v~l~v~R 102 (117)
T 2csj_A 45 ETSIVISDVLPGGPAD-GLLQENDRVVMVNGTPMEDVLHSFAVQQLRK-SGKIAAIVVKR 102 (117)
T ss_dssp CCBCEEEEECTTSSHH-HHBCTTCEEEEESSCBCBTCCHHHHHHHHHH-SCSEEEEEEEE
T ss_pred CCCEEEEEECCCCccc-ccCCCCCEEEEECCEECCCcCHHHHHHHHhc-CCCeEEEEEEE
Confidence 4689999999999997 9999999999999999976 4666666665 57899999999
No 307
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=98.46 E-value=2.5e-07 Score=72.36 Aligned_cols=52 Identities=17% Similarity=0.354 Sum_probs=46.3
Q ss_pred EeEECCCCccccCCCCCCCEEEEECCEeeC--CHHHHHHHHhcCCCCeEEEEEEE
Q 013444 372 VPVVTPGSPAHLAGFLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPLKVVVQR 424 (443)
Q Consensus 372 V~~v~~~spA~~aGl~~GDiI~~vng~~V~--s~~dl~~~l~~~~g~~v~l~v~R 424 (443)
|..+.+++||+++||++||+|++|||+.+. +.+++.++|+ ..|.+++|+|..
T Consensus 27 I~~v~~gspA~~aGl~~GD~Il~VNG~~v~~~~~~evv~llr-~~g~~V~L~v~p 80 (82)
T 1r6j_A 27 ITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILS-TSGTVVTITIMP 80 (82)
T ss_dssp EEEECTTSHHHHHTCCSSEEEEEETTEECTTCCHHHHHHHHH-HSCSEEEEEEEE
T ss_pred EEEecCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHHh-cCCCEEEEEEEe
Confidence 688999999999999999999999999995 5678888888 678889999875
No 308
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.45 E-value=8.8e-08 Score=79.26 Aligned_cols=56 Identities=23% Similarity=0.528 Sum_probs=49.4
Q ss_pred CceEEeEECCCCccccCC-CCCCCEEEEECCEeeCCH--HHHHHHHhcCCCCeEEEEEEE
Q 013444 368 SGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQSI--TEIIEIMGDRVGEPLKVVVQR 424 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s~--~dl~~~l~~~~g~~v~l~v~R 424 (443)
.|++|..|.+++||+++| |++||+|++|||+++.++ .++..++. ..++.+.|+|.|
T Consensus 39 ~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~~-~~~~~v~l~v~r 97 (113)
T 1um7_A 39 EGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALK-RAGQSVTIVAQY 97 (113)
T ss_dssp CCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHHHH-SCCSEEEEEEEC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH-hCCCcEEEEEEE
Confidence 689999999999999999 999999999999999887 56666555 457899999998
No 309
>2pka_B Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_B 1hia_B
Probab=98.43 E-value=9.7e-07 Score=77.03 Aligned_cols=123 Identities=15% Similarity=0.165 Sum_probs=76.4
Q ss_pred CCCCEEEEEEcCCC----CCCccccCCCCCCCCCCEEEEEecCCCC--------CCceEEEEEEeeecCccCCCCC-Ccc
Q 013444 208 FHSDIAIVKINSKT----PLPAAKLGTSSKLCPGDWVVAMGCPHSL--------QNTVTAGIVSCVDRKSSDLGLG-GMR 274 (443)
Q Consensus 208 ~~~DlAlLkl~~~~----~~~~~~l~~s~~~~~G~~V~~iG~p~~~--------~~~~t~G~Vs~~~~~~~~~~~~-~~~ 274 (443)
..+|||||+++.+. .+.++.|... ....|+.++++||.... ...+....+.-+....+...+. ...
T Consensus 6 ~~nDIALl~L~~~v~~~~~v~picLp~~-~~~~~~~~~v~GWG~~~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~ 84 (152)
T 2pka_B 6 YSHDLMLLRLQSPAKITDAVKVLELPTQ-EPELGSTCEASGWGSIEPGPDDFEFPDEIQCVQLTLLQNTFCADAHPDKVT 84 (152)
T ss_dssp CTTCCEEEEESSCCCCCSSCCCCCCCSS-CCCTTCEEEEEESSCSSCCSSCCCCCSBCEEEEEEEECHHHHHHHCSSBCC
T ss_pred CCCCEEEEEECCCCcCCCCEEeEECCCC-CCCCCCEEEEEecccccCCCCcCCCCccceEEEeEEcCHHHhhhhhcCCCC
Confidence 35799999998763 3567777653 34679999999997532 1233444444333322211111 112
Q ss_pred ceEEEEc-----ccCCCCCccceeeecCCCEEEEEEEEeecC---CCeEEEEeHHHHHHHHHHHHH
Q 013444 275 REYLQTD-----CAINAGNSGGPLVNIDGEIVGINIMKVAAA---DGLSFAVPIDSAAKIIEQFKK 332 (443)
Q Consensus 275 ~~~i~~d-----~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~---~g~~~aIPi~~i~~~l~~l~~ 332 (443)
...|... ...|.|+|||||+- +|+++||++++.... ..-+.+.-+...+++|++..+
T Consensus 85 ~~~iCa~~~~~~~~~C~GDsGgPL~~-~g~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~~~ 149 (152)
T 2pka_B 85 ESMLCAGYLPGGKDTCMGDSGGPLIC-NGMWQGITSWGHTPCGSANKPSIYTKLIFYLDWIDDTIT 149 (152)
T ss_dssp TTEEEEECTTSSCBCCTTCTTCEEEE-TTEEEEEECCCCSSTTCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred CCEEeeccCCCCCcccCCccccceEE-CCEEEEEEecCCCCCCCCCCCeEEEEHHHHHHHHHHHhc
Confidence 3345543 35799999999995 589999999873221 223556777777777776543
No 310
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=98.40 E-value=3.9e-07 Score=83.42 Aligned_cols=57 Identities=14% Similarity=0.339 Sum_probs=50.4
Q ss_pred CceEEeEECCCCccccCC-CCCCCEEEEECCEeeCCH--HHHHHHHhcCCCCeEEEEEEEC
Q 013444 368 SGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQSI--TEIIEIMGDRVGEPLKVVVQRA 425 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s~--~dl~~~l~~~~g~~v~l~v~R~ 425 (443)
.|++|.+|.++|+|+++| |++||+|++|||++|.++ .++..++.. .++.+.|+|.|.
T Consensus 136 ~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~-~~~~v~L~V~R~ 195 (206)
T 3r0h_A 136 IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKG-ANGKVSMEVTRP 195 (206)
T ss_dssp SCEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHT-CCSEEEEEEEEE
T ss_pred ceEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeC
Confidence 589999999999999999 999999999999999965 777777765 467899999993
No 311
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=98.37 E-value=4.7e-07 Score=93.10 Aligned_cols=59 Identities=22% Similarity=0.376 Sum_probs=54.7
Q ss_pred CceEEeEECCCCccccCCCCCCCEEEEECCEeeCC--HHHHHHHHhc-CCCCeEEEEEEECCC
Q 013444 368 SGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQS--ITEIIEIMGD-RVGEPLKVVVQRAND 427 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s--~~dl~~~l~~-~~g~~v~l~v~R~~g 427 (443)
.|++|..|.++|||+++||++||+|++|||++|.+ ++++..+|.. ..|++++|+|.| ++
T Consensus 23 ~Gi~V~~V~~gspA~~aGL~~GD~Il~VNG~~v~~~t~~e~~~~L~~~~~g~~v~L~V~r-~g 84 (468)
T 3shw_A 23 VGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQK-KK 84 (468)
T ss_dssp TEEEEEEECSSSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEEEEEE-CH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEE-CC
Confidence 69999999999999999999999999999999987 8999998877 588999999999 54
No 312
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=98.24 E-value=1.3e-07 Score=97.25 Aligned_cols=66 Identities=29% Similarity=0.492 Sum_probs=0.0
Q ss_pred CCceEEeEECCCCccccCCCCCCCEEEEECCEeeCCHHHHHHHHhcCCCCeEEEEEEECCCeEEEEEE
Q 013444 367 KSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEIIEIMGDRVGEPLKVVVQRANDQLVTLTV 434 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s~~dl~~~l~~~~g~~v~l~v~R~~g~~~~l~v 434 (443)
..|++|.+|.++|||+++||++||+|++|||++|.+++++.+++....+ .+.|+|.| +++.+++.+
T Consensus 382 ~~gv~V~~V~~gspA~~aGL~~GDiI~~vng~~v~~~~~l~~~l~~~~~-~v~l~v~R-~g~~~~~~l 447 (448)
T 1ky9_A 382 DQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAELRKVLDSKPS-VLALNIQR-GDSTIYLLM 447 (448)
T ss_dssp --------------------------------------------------------------------
T ss_pred CCeEEEEEecCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHHcCCC-eEEEEEEE-CCEEEEEEe
Confidence 4689999999999999999999999999999999999999998877555 89999999 777666554
No 313
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=98.23 E-value=6e-07 Score=90.88 Aligned_cols=57 Identities=23% Similarity=0.365 Sum_probs=50.4
Q ss_pred ceEEeEECCCCccccCCCCCCCEEEEECCEeeCCHHHHHHHHhcCCCCeEEEEEEECCCe
Q 013444 369 GVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEIIEIMGDRVGEPLKVVVQRANDQ 428 (443)
Q Consensus 369 g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s~~dl~~~l~~~~g~~v~l~v~R~~g~ 428 (443)
.++|..|.++|||++|||++||+|++|||++|.+++ +.+++.. .|++++|++.| +++
T Consensus 91 ~~~V~~V~~gsPA~~AGL~~GD~I~~InG~~v~~~~-~~~~l~~-~g~~v~l~v~R-~g~ 147 (403)
T 3k50_A 91 NALISYVVPGSPAEEAGLQRGHWIMMMNGDYITKKV-ESELLQG-STRQLQIGVYK-EVV 147 (403)
T ss_dssp EEEEEEECTTSHHHHTTCCTTCEEEEETTBCBCTTT-GGGGTSC-SCEEEEEEEEE-EEC
T ss_pred eEEEEEeCCCChHHHcCCCCCCEEEEECCEEccchh-HHHHhhC-CCCEEEEEEEe-CCc
Confidence 478999999999999999999999999999999985 6666666 88899999999 443
No 314
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=98.20 E-value=1.1e-06 Score=83.69 Aligned_cols=57 Identities=18% Similarity=0.352 Sum_probs=50.7
Q ss_pred CCceEEeEECCCCcccc-CCCCCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEE
Q 013444 367 KSGVLVPVVTPGSPAHL-AGFLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQR 424 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~-aGl~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R 424 (443)
..|++|.+|.+++||++ +||++||+|++|||++|.+ +.++..++... ++++.|+|.|
T Consensus 102 ~~gi~V~~V~~gspA~~~aGL~~GD~Il~VNG~~v~~~t~~e~v~~l~~~-g~~V~L~V~R 161 (263)
T 1z87_A 102 KMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKT-GKEVVLEVKY 161 (263)
T ss_dssp TEEEEEEECCTTSHHHHCTTCCSSCEEEEESSCBCTTSCHHHHHHHHHHC-CSCCCEEEEC
T ss_pred CCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCcCHHHHHHHHhcC-CCeEEEEEEe
Confidence 35899999999999999 7999999999999999987 57777877764 6789999999
No 315
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=98.19 E-value=5.8e-07 Score=90.78 Aligned_cols=66 Identities=15% Similarity=0.281 Sum_probs=54.3
Q ss_pred CceEEeEECCCCccccCC-CCCCCEEEEECCEeeCCH--HHHHHHHhcC-CCCeEEEEEEECCCeEEEEEE
Q 013444 368 SGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQSI--TEIIEIMGDR-VGEPLKVVVQRANDQLVTLTV 434 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s~--~dl~~~l~~~-~g~~v~l~v~R~~g~~~~l~v 434 (443)
.|++|.+|.++|||+++| |++||+|++|||+++.+| .++..++... .+.++.|+|.| ++...++.+
T Consensus 232 ~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~~~~~v~l~v~r-~~~~~~v~l 301 (388)
T 3suz_A 232 PTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLKNQTQVKLNIVS-CPPVTTVLI 301 (388)
T ss_dssp CCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTTHHHHTTTCTTCSCEEEEEEE-CCSCC----
T ss_pred CCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhccCCCcccccccc-ccccceeeE
Confidence 368999999999999999 999999999999999998 6788888764 66789999999 665555555
No 316
>1lvm_A Catalytic domain of the nuclear inclusion protein A (NIA); beta barrel, chymotrypsin-type cystein protease, enzyme- peptide complex; 1.80A {Tobacco etch virus} SCOP: b.47.1.3 PDB: 1lvb_A 1q31_A
Probab=98.17 E-value=0.0001 Score=67.75 Aligned_cols=174 Identities=14% Similarity=0.123 Sum_probs=106.2
Q ss_pred HhCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCCCcEEEE----EEEeecC
Q 013444 133 RVCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEG----TVLNADF 208 (443)
Q Consensus 133 ~~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~dg~~~~a----~vv~~d~ 208 (443)
-+...|..|+...+... ..--|+.+. + +|+|++|..+.. ++.+.|....|.-.-. --+..-+
T Consensus 21 ~Ia~~ic~l~n~sdg~~-----~~l~gigyG-~-~iItn~HLf~~n-------nG~L~I~s~hG~f~v~nt~~lki~~i~ 86 (229)
T 1lvm_A 21 PISSTICHLTNESDGHT-----TSLYGIGFG-P-FIITNKHLFRRN-------NGTLLVQSLHGVFKVKNTTTLQQHLID 86 (229)
T ss_dssp HHHTTEEEEEEEETTEE-----EEEEEEEET-T-EEEECGGGGGCC-------SSEEEEEETTEEEEESCGGGSEEEECT
T ss_pred hhheEEEEEEeccCCce-----EEEEEEeEC-C-EEEeChhhhccC-------CCcEEEEeCCCeEEeCCCCceeeEEeC
Confidence 44566777775432211 223356665 3 999999999874 3678887765532110 0233346
Q ss_pred CCCEEEEEEcCCCCCCccccC-CCCCCCCCCEEEEEecCCCCCCceEEEEEEeeecCccCCCCCCccceEEEEcccCCCC
Q 013444 209 HSDIAIVKINSKTPLPAAKLG-TSSKLCPGDWVVAMGCPHSLQNTVTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAG 287 (443)
Q Consensus 209 ~~DlAlLkl~~~~~~~~~~l~-~s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G 287 (443)
..||.+|++..+ +||.+-. .-..++.+|+|+++|.-+.... ....|+........ ....++.....+..|
T Consensus 87 g~DiiiIrmPkD--fpPf~~~l~FR~P~~~e~V~lVg~~fq~k~--~~s~vSesS~i~p~-----~~~~fWkHwIsT~~G 157 (229)
T 1lvm_A 87 GRDMIIIRMPKD--FPPFPQKLKFREPQREERICLVTTNFQTKS--MSSMVSDTSCTFPS-----SDGIFWKHWIQTKDG 157 (229)
T ss_dssp TSSCEEEECCTT--SCCCCSCCCBCCCCTTCEEEEEEEECSSSS--CEEEECCCEECEEE-----TTTTEEEECBCCCTT
T ss_pred CccEEEEeCCCc--CCCcccccccCCCCCCCeEEEEEeEeecCC--ccEEECCcceeEec-----CCCCEeEEEeeCCCC
Confidence 789999999754 4433221 1256789999999998654321 12223322211110 012456666777899
Q ss_pred Cccceeeec-CCCEEEEEEEEeecCCCeEEEEeHHH-HHHHHHHH
Q 013444 288 NSGGPLVNI-DGEIVGINIMKVAAADGLSFAVPIDS-AAKIIEQF 330 (443)
Q Consensus 288 ~SGGPlvd~-~G~VVGI~s~~~~~~~g~~~aIPi~~-i~~~l~~l 330 (443)
+=|.|+|+. ||.+|||++..... ...+|+.|+.. +.++|+..
T Consensus 158 ~CGlPlVs~~Dg~IVGiHsl~~~~-~~~NyF~~f~~~f~~~L~~~ 201 (229)
T 1lvm_A 158 QCGSPLVSTRDGFIVGIHSASNFT-NTNNYFTSVPKNFMELLTNQ 201 (229)
T ss_dssp CTTCEEEETTTCCEEEEEEEEETT-SCSEEEEECCTTHHHHHHCG
T ss_pred cCCCcEEECCCCcEEEEEcccccC-CCeEEEeCCCHHHHHHHhcc
Confidence 999999986 59999999987654 34688887764 33555544
No 317
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.12 E-value=7.8e-06 Score=92.31 Aligned_cols=69 Identities=16% Similarity=0.233 Sum_probs=61.1
Q ss_pred CceEEeEECCC--------CccccCC--CCCCCEEEEECCEeeCCHHHHHHHHhcCCCCeEEEEEEECCCeEEEEEEEec
Q 013444 368 SGVLVPVVTPG--------SPAHLAG--FLPSDVVIKFDGKPVQSITEIIEIMGDRVGEPLKVVVQRANDQLVTLTVIPE 437 (443)
Q Consensus 368 ~g~~V~~v~~~--------spA~~aG--l~~GDiI~~vng~~V~s~~dl~~~l~~~~g~~v~l~v~R~~g~~~~l~v~~~ 437 (443)
.+++|..|.++ |||+++| |+ ||+|++|||+++.++.++..+|....|+++.|+|.|++++..++++++.
T Consensus 748 ~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~~~~~~~~~~~g~~v~l~v~r~~~~~~~~~~~~~ 826 (1045)
T 1k32_A 748 DHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGSNIYRVLSEKAGTSARIRLSGKGGDKRDLMIDIL 826 (1045)
T ss_dssp TEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTBCHHHHHHTTTTSEEEEEEECSSSCEEEEEEECB
T ss_pred CEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchhhHHHhhcCCCCCEEEEEEECCCCceEEEEEEEc
Confidence 57889999988 9999999 99 9999999999999998999989888999999999995446677877753
No 318
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=98.08 E-value=1.6e-05 Score=63.48 Aligned_cols=57 Identities=7% Similarity=0.147 Sum_probs=50.1
Q ss_pred CceEEeEECCCCccccCC-CCCCCEEEEECCEeeCC--HHHHHHHHhc-CCCCeEEEEEEE
Q 013444 368 SGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGD-RVGEPLKVVVQR 424 (443)
Q Consensus 368 ~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s--~~dl~~~l~~-~~g~~v~l~v~R 424 (443)
..++|..|.++++|++.| |++||.|++|||+.+.. ..++.++|++ ..|.+++|.+.+
T Consensus 28 g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~g~~~~L~lv~ 88 (95)
T 3gge_A 28 GYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKELKKEELFTMKLIE 88 (95)
T ss_dssp SCCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred CcEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhCCCCCEEEEEEEC
Confidence 457899999999999986 99999999999999965 5788899987 677899999987
No 319
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=98.06 E-value=1.3e-05 Score=83.75 Aligned_cols=91 Identities=16% Similarity=0.180 Sum_probs=70.8
Q ss_pred ecCceeecccHHHHHHhhcCC------------CCCCCCCCceEEeEECCCCccccCCCCCCCEEEEECCEeeCCHHHHH
Q 013444 340 WLGLKMLDLNDMIIAQLKERD------------PSFPNVKSGVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEII 407 (443)
Q Consensus 340 ~lGi~~~~~~~~~~~~l~~~~------------~~~~~~~~g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s~~dl~ 407 (443)
+.|+.+..++..++.++.... ........|++|.+|.+++++..+|++.||+|++|||++|++.+||.
T Consensus 375 ~~Gl~f~~Lt~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gVvvs~V~~~s~a~~~g~~~gdiI~~vNg~~V~s~~~l~ 454 (539)
T 4fln_A 375 VAGLVFTPLSEPLIEEECEDTIGLKLLTKARYSVARFRGEQIVILSQVLANEVNIGYEDMNNQQVLKFNGIPIRNIHHLA 454 (539)
T ss_dssp STTEEEEECCHHHHTTSCSSSSCHHHHHHHHHCCCSSTTCCCEEEEEECCCGGGTTCSSCCSEEEEEETTEECCSHHHHH
T ss_pred ccceEEeeCCHHHHHhhcccccCceeeehhhhhhhccCCceEEEEEEecCCchhhhcCCCCCCEEEeECCEEcCCHHHHH
Confidence 679999999888765543211 01112346899999999999999999999999999999999999999
Q ss_pred HHHhcCCCCeEEEEEEECCCeEEEE
Q 013444 408 EIMGDRVGEPLKVVVQRANDQLVTL 432 (443)
Q Consensus 408 ~~l~~~~g~~v~l~v~R~~g~~~~l 432 (443)
+++++..++.+.|.+. +++.+.|
T Consensus 455 ~~l~~~k~~~l~~~~~--~~~~ivL 477 (539)
T 4fln_A 455 HLIDMCKDKYLVFEFE--DNYVAVL 477 (539)
T ss_dssp HHHHTCCSSEEEEEET--TSCEEEE
T ss_pred HHHHHcCCCeEEEEEC--CCEEEEE
Confidence 9999887777766653 4555433
No 320
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=97.88 E-value=1.3e-06 Score=77.36 Aligned_cols=34 Identities=18% Similarity=0.334 Sum_probs=32.2
Q ss_pred EEeEECCCCccccCCCCCCCEEEEECCEeeCCHH
Q 013444 371 LVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSIT 404 (443)
Q Consensus 371 ~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s~~ 404 (443)
+|..+.++|||+++||++||+|++|||+++.++.
T Consensus 110 ~v~~v~~~s~a~~aGl~~GD~I~~ing~~v~~~~ 143 (166)
T 1w9e_A 110 KITSIVKDSSAARNGLLTEHNICEINGQNVIGLK 143 (166)
T ss_dssp EEEEECTTSHHHHTTCCSSEEEEEETTEECTTCC
T ss_pred EEEEEccCCHHHHcCCCCCCEEEEECCEECCCCC
Confidence 7899999999999999999999999999999873
No 321
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=97.86 E-value=2e-05 Score=85.70 Aligned_cols=59 Identities=17% Similarity=0.411 Sum_probs=51.0
Q ss_pred CCceEEeEECCCCccccCC-CCCCCEEEEECCEeeCCH--HHHHHHHhcCCCCeEEEEEEECCC
Q 013444 367 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQSI--TEIIEIMGDRVGEPLKVVVQRAND 427 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s~--~dl~~~l~~~~g~~v~l~v~R~~g 427 (443)
..|++|..|.+++||+++| |+.||+|++|||+.|.++ .++..++.. .|+++.|+|.| ++
T Consensus 88 ~~g~~V~~v~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~-~g~~v~l~v~R-~~ 149 (721)
T 2xkx_A 88 DPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKE-AGSIVRLYVMR-RK 149 (721)
T ss_pred CCCeEEEEeCCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHhhc-cccccceEEEe-cc
Confidence 4699999999999999999 999999999999999987 555655543 57889999999 55
No 322
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=97.83 E-value=2.9e-05 Score=84.43 Aligned_cols=57 Identities=18% Similarity=0.470 Sum_probs=51.8
Q ss_pred CCceEEeEECCCCccccCC-CCCCCEEEEECCEeeCC--HHHHHHHHhcCCCCeEEEEEEE
Q 013444 367 KSGVLVPVVTPGSPAHLAG-FLPSDVVIKFDGKPVQS--ITEIIEIMGDRVGEPLKVVVQR 424 (443)
Q Consensus 367 ~~g~~V~~v~~~spA~~aG-l~~GDiI~~vng~~V~s--~~dl~~~l~~~~g~~v~l~v~R 424 (443)
..|++|..|.++|+|+++| |++||+|++|||++|.+ ++++.++|... ++.+.|.|.|
T Consensus 330 ~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~e~~~~l~~~-~~~v~L~v~r 389 (721)
T 2xkx_A 330 GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNA-GQTVTIIAQY 389 (721)
T ss_pred CCCeEEEEeCCCChHHhcCCCccCCEEEEECCEECCCCCHHHHHHHHHhc-CCeEEEEEEe
Confidence 3699999999999999999 99999999999999987 89999988764 6789999998
No 323
>3qzr_A 3C protein; chymotrypsin-fold, beta-ribbon, hydrolysis, nucleus, hydrola hydrolase inhibitor complex; HET: AG7; 1.04A {Human enterovirus 71} SCOP: b.47.1.0 PDB: 3osy_A 3qzq_A* 3r0f_A* 3sjo_A* 3sjk_A 3sji_A* 3sj8_A* 3sj9_A
Probab=97.56 E-value=0.0094 Score=53.26 Aligned_cols=162 Identities=13% Similarity=0.120 Sum_probs=97.3
Q ss_pred HHHHhCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEEEE--eec
Q 013444 130 AAARVCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGTVL--NAD 207 (443)
Q Consensus 130 ~~~~~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~dg~~~~a~vv--~~d 207 (443)
....+...++.|++.. +.-||+-|..+ ..|-..|.... ..+.+ +|+.++..-. -.|
T Consensus 11 ~~~l~~~N~~~vtt~~---------g~ft~LgI~dr-~~vvP~Ha~~~---------~~i~i---~g~~~~v~d~~~L~~ 68 (187)
T 3qzr_A 11 ALSLLRRNVRQVQTDQ---------GHFTMLGVRDR-LAVLPRHSQPG---------KTIWI---EHKLVNVLDAVELVD 68 (187)
T ss_dssp HHHHHHHHEEEEEETT---------EEEEEEEEEBT-EEEEEGGGCCC---------SEEEE---TTEEEEEEEEEECCC
T ss_pred HHHHHHcCeEEEEECC---------CeEEEEEEeee-EEEEeCCCCCC---------CEEEE---CCEEEEeeeeEEEEC
Confidence 3445667788888754 33588888766 89999999433 34433 5666654211 112
Q ss_pred ---CCCCEEEEEEcCCCCCCccccCCCCCCCCCCEEEEEecCCCCCC-ceEEEEEEeeecCccCCCCCCccceEEEEccc
Q 013444 208 ---FHSDIAIVKINSKTPLPAAKLGTSSKLCPGDWVVAMGCPHSLQN-TVTAGIVSCVDRKSSDLGLGGMRREYLQTDCA 283 (443)
Q Consensus 208 ---~~~DlAlLkl~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~-~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~ 283 (443)
...||++++++....++-++---.+.......+.++-......+ .+..|.+....... +. +.....++..+.+
T Consensus 69 ~~g~~~Elt~v~l~~~~kfRDIrkfi~~~~~~~~~~~L~~ns~~~~~~~~~vG~v~~~g~in--ls-g~~t~r~l~Y~~p 145 (187)
T 3qzr_A 69 EQGVNLALTLITLDTNEKFRDITKFIPENISTASDATLVINTEHMPSMFVPVGDVVQYGFLN--LS-GKPTHRTMMYNFP 145 (187)
T ss_dssp TTCCCCSEEEEEECSSCCBCCCGGGSCSSCCCEEEEEEEECCSSSCSEEEEEEEEEEEEEEE--ET-TEEEEEEEEESSC
T ss_pred CCCCEEEEEEEEcCCCccccchHHhCccCcCCCCceEEEEEcCCCcceEEEeccEEEeceEe--CC-CCccccEEEECCC
Confidence 24699999999765554333211222332224455545444422 33446555432211 11 1223567889999
Q ss_pred CCCCCccceeeecCCCEEEEEEEEeecCCCeEEEEeH
Q 013444 284 INAGNSGGPLVNIDGEIVGINIMKVAAADGLSFAVPI 320 (443)
Q Consensus 284 i~~G~SGGPlvd~~G~VVGI~s~~~~~~~g~~~aIPi 320 (443)
...|.=||+|+. .|+++||++.+ ....+|+.++
T Consensus 146 Tk~G~CGgvl~~-~gkIiGIHvaG---nG~~G~~a~L 178 (187)
T 3qzr_A 146 TKAGQCGGVVTS-VGKIIGIHIGG---NGRQGFCAGL 178 (187)
T ss_dssp CCTTCTTCEEEE-TTEEEEEEEEE---CSSCEEEEEC
T ss_pred CCCCccCCeEEe-cCcEEEEEECC---CCCcEEEEEe
Confidence 999999999996 89999999987 2345666553
No 324
>3q3y_A HEVB EV93 3C protease; cysteine trypsin-like protease, 3C cysteine protease (picorn antiviral compound 1 (AG7404); HET: XNV; 1.32A {Human enterovirus B} SCOP: b.47.1.4 PDB: 3q3x_A* 3ruo_A* 3zyd_A 3zz5_A* 3zz6_A* 3zz7_A* 3zz8_A* 3zz9_A* 3zza_A* 3zzb_A* 2ztx_A 2vb0_A 2zty_A 2ztz_A 2zu3_A* 3zye_A 3zz3_A 2zu1_A 3zz4_A 3zzc_A* ...
Probab=97.43 E-value=0.012 Score=52.63 Aligned_cols=160 Identities=14% Similarity=0.127 Sum_probs=95.4
Q ss_pred HHhCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEEE--EeecC-
Q 013444 132 ARVCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGTV--LNADF- 208 (443)
Q Consensus 132 ~~~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~dg~~~~a~v--v~~d~- 208 (443)
..+...++.|++.. +.-||+-|.++ .+|-..|.-.+ ..+.| +|+.++..- .-.|.
T Consensus 11 sl~k~N~~~vtT~~---------G~ft~LgI~dr-~~vvPtHa~~~---------~~i~i---~G~~~~v~d~~~L~~~~ 68 (191)
T 3q3y_A 11 AMMKRNASTVKTEY---------GEFTMLGIYDR-WAVLPRHAKPG---------PTILM---NDQEVGVLDAKELVDKD 68 (191)
T ss_dssp HHHHHHEEEEEETT---------EEEEEEEEEBT-EEEEEGGGCCC---------SEEEE---TTEEEEEEEEEEEECTT
T ss_pred HHHHcCeEEEEECC---------CcEEEEEEece-EEEEECCCCCC---------CEEEE---CCEEEEeeeEEEEEcCC
Confidence 44557788888754 33588888766 89999999433 34333 666666411 11132
Q ss_pred --CCCEEEEEEcCCCCCCccccCCCCCCCCCCEEEEEecCCCCCC-ceEEEEEEeeecCccCCCCCCccceEEEEcccCC
Q 013444 209 --HSDIAIVKINSKTPLPAAKLGTSSKLCPGDWVVAMGCPHSLQN-TVTAGIVSCVDRKSSDLGLGGMRREYLQTDCAIN 285 (443)
Q Consensus 209 --~~DlAlLkl~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~-~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~ 285 (443)
..||++|+++....++-++---...........++-.-....+ .+..|.+....... +. +.....++..+++..
T Consensus 69 g~~lElt~v~l~~~~kFRDIrkfi~~~~~~~~~~~Lv~ns~~~p~~~~~vG~v~~~g~in--ls-g~~t~r~l~Y~~pTk 145 (191)
T 3q3y_A 69 GTNLELTLLKLNRNEKFRDIRGFLAREEVEVNEAVLAINTSKFPNMYIPVGQVTDYGFLN--LG-GTPTKRMLVYNFPTR 145 (191)
T ss_dssp CCEEEEEEEEEECSSCBCCCGGGBCSSCCCEEEEEEEECSSSSTTEEEEEEEEEEEEEEE--ET-TEEEEEEEEEESCCC
T ss_pred CCEEEEEEEECCCCccccchHHhcccccccCCceEEEEEcCCCcceEEEeccEEEcceEe--CC-CCcccCEEEecCCCC
Confidence 3599999999765554333211223333333444444434332 34446555432211 11 122356889999999
Q ss_pred CCCccceeeecCCCEEEEEEEEeecCCCeEEEEeH
Q 013444 286 AGNSGGPLVNIDGEIVGINIMKVAAADGLSFAVPI 320 (443)
Q Consensus 286 ~G~SGGPlvd~~G~VVGI~s~~~~~~~g~~~aIPi 320 (443)
.|.=||+|+. .|+++||++.+ +...+|+.++
T Consensus 146 ~G~CGgvL~~-~gkIiGIHvgG---nG~~Gfaa~L 176 (191)
T 3q3y_A 146 AGQCGGVLMS-TGKVLGIHVGG---NGHQGFSAAL 176 (191)
T ss_dssp TTCTTCEEEE-TTEEEEEEEEE---ETTEEEEEEC
T ss_pred CCccCCEEEe-CCCEEEEEECC---CCcceEEeeh
Confidence 9999999995 79999999987 2345666543
No 325
>3zve_A 3C protease; hydrolase, michael inhibitor; HET: G84; 1.80A {Human enterovirus} PDB: 3zv8_A* 3zva_A* 3zvb_A* 3zv9_A* 3zvd_A* 3zvc_A* 3zvf_A* 3zvg_A*
Probab=97.42 E-value=0.0072 Score=54.33 Aligned_cols=157 Identities=17% Similarity=0.151 Sum_probs=88.4
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEE--EEeecC---
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGT--VLNADF--- 208 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~dg~~~~a~--vv~~d~--- 208 (443)
+..-+|.|++.. +.-||..|..+ ++|...|...+ ..+.+ +|+.+... ....+.
T Consensus 11 ~k~N~~~vtt~~---------G~ft~LgI~dr-~~lvP~Ha~~~---------~ti~i---~g~~~~v~d~~~l~~~~~~ 68 (190)
T 3zve_A 11 MKKNTVVARTEK---------GEFTMLGVHDR-VAVIPTHASVG---------ETIYI---NDVETKVLDACALRDLTDT 68 (190)
T ss_dssp HHHHEEEEEETT---------EEEEEEEEEBT-EEEEEGGGCCC---------SEEEE---TTEEEEEEEEEEEECTTCC
T ss_pred HHcCEEEEEeCC---------EEEEEEEEeCC-EEEEecCCCCC---------cEEEE---CCEEEEeeEEEEEEcCCCC
Confidence 345677777543 34678888866 99999997643 34433 34443321 111232
Q ss_pred CCCEEEEEEcCCCCCCcc--ccCCCCCCCCCCEEEEEecCCCCCCceEEEEEEeeecCccCCCCCCccceEEEEcccCCC
Q 013444 209 HSDIAIVKINSKTPLPAA--KLGTSSKLCPGDWVVAMGCPHSLQNTVTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINA 286 (443)
Q Consensus 209 ~~DlAlLkl~~~~~~~~~--~l~~s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~ 286 (443)
..||++++++....++-+ .|.+ ......+.+.++=.+.........|.+........ .+.....++..+++..+
T Consensus 69 ~~Dlt~v~l~~~~kFRDIr~~~~~-~~~~~~~~~l~i~s~~~~~~~~~v~~v~~~~~i~l---~g~~~~~~~~Y~~pT~~ 144 (190)
T 3zve_A 69 NLEITIVKLDRNQKFRDIRHFLPR-YEDDYNDAVLSVHTSKFPNMYIPVGQVTNYGFLNL---GGTPTHRILMYNFPTRA 144 (190)
T ss_dssp EEEEEEEEECCSSCBCCCGGGSCS-SCCCEEEEEEEECSSSCSSEEEEEEEEEEEEEEEE---TTEEEEEEEEESSCCCT
T ss_pred eEEEEEEEcCCCcccCchHHhccc-cCCCCCCeEEEEECCCCcceEEecccceEeceeec---CCCeeeeeEEEecCCCC
Confidence 359999999876444433 1222 22222333333322222222233344433322111 12234567888999999
Q ss_pred CCccceeeecCCCEEEEEEEEeecCCCeEEEEeH
Q 013444 287 GNSGGPLVNIDGEIVGINIMKVAAADGLSFAVPI 320 (443)
Q Consensus 287 G~SGGPlvd~~G~VVGI~s~~~~~~~g~~~aIPi 320 (443)
|+=||||+. +|+++||+..+- ...+|+.++
T Consensus 145 G~CG~~li~-~gkI~GiHvaG~---G~~g~~~~l 174 (190)
T 3zve_A 145 GQCGGVVTT-TGKVIGIHVGGN---GAQGFAAML 174 (190)
T ss_dssp TCTTCEEEE-TTEEEEEEEEEC---SSCEEEEEC
T ss_pred CccCCeEEE-CCCEEEEEECcC---CCceEehhh
Confidence 999999994 789999999873 235666543
No 326
>2hal_A Hepatitis A protease 3C; 3C protease, inhibitor design; HET: BBL; 1.35A {Hepatitis a virus} SCOP: b.47.1.4 PDB: 2h6m_A* 2h9h_A* 2cxv_A* 2a4o_A* 1hav_A 1qa7_A*
Probab=97.34 E-value=0.0091 Score=54.74 Aligned_cols=176 Identities=14% Similarity=0.119 Sum_probs=97.9
Q ss_pred HHHHHHhCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceE--EEEeCCCcEEEEE---
Q 013444 128 ANAAARVCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKV--DVTLQDGRTFEGT--- 202 (443)
Q Consensus 128 ~~~~~~~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i--~V~~~dg~~~~a~--- 202 (443)
.++...+.+-.|+|....+... ....++|..|..+ ++|...|....... ...+ .+. -+|+.|...
T Consensus 3 ~~i~~~v~~N~~~i~~~~~~~~---~~~~~t~LgI~~r-~~lvP~H~~~~~~~-----~~~~~~~i~-i~g~~~~~~~~~ 72 (212)
T 2hal_A 3 LEIAGLVRKNLVQFGVGEKNGS---VRWVMNALGVKDD-WLLVPSHAYKFEKD-----YEMMEFYFN-RGGTYYSISAGN 72 (212)
T ss_dssp HHHHHHHHHHEEEEEEEETTSC---CEEEEEEEEEEBT-EEEEEGGGTTTSTT-----GGGEEEEEE-ETTEEEEEEGGG
T ss_pred eeehhhhhccEEEEEEeCCCCC---cceEEEEEEEcCC-EEEEecccCccccc-----ccccceEEE-ECCEEEeecccc
Confidence 4566778888899988653322 2246899999877 99999999753210 1122 222 256666543
Q ss_pred --EEeec-CCCCEEEEEEcCCCCCCccc--cCCCCCC-CCCC-EEEEEecCCCCCCceEEE------EEEeeecCccCCC
Q 013444 203 --VLNAD-FHSDIAIVKINSKTPLPAAK--LGTSSKL-CPGD-WVVAMGCPHSLQNTVTAG------IVSCVDRKSSDLG 269 (443)
Q Consensus 203 --vv~~d-~~~DlAlLkl~~~~~~~~~~--l~~s~~~-~~G~-~V~~iG~p~~~~~~~t~G------~Vs~~~~~~~~~~ 269 (443)
+...| ...||++++++....++.+. +.+..++ ..++ .+.+++...+.......+ .++..... .
T Consensus 73 v~~~~~d~~~~Dl~lv~Lp~~~~FrDIrk~f~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~i~---~- 148 (212)
T 2hal_A 73 VVIQSLDVGFQDVVLMKVPTIPKFRDITQHFIKKGDVPRALNRLATLVTTVNGTPMLISEGPLKMEEKATYVHKK---N- 148 (212)
T ss_dssp SEEECSSSSCCSEEEEECTTSCCBCCCGGGBCCGGGGGGTTTSCEEEEEEETTEEEEEEECSCEEEEEEEEEEEC---T-
T ss_pred ceeEeccCCCceEEEEECCCCCccCChhHhcCCcccccccccceEEEEeccCCCceEEecccccccceeeEEEec---C-
Confidence 33333 46899999997643333221 2111122 2233 333332211111111111 11111101 0
Q ss_pred CCCccc----eEEEEcccCCCCCccceeeec----CCCEEEEEEEEeecCCCeEEEEeH
Q 013444 270 LGGMRR----EYLQTDCAINAGNSGGPLVNI----DGEIVGINIMKVAAADGLSFAVPI 320 (443)
Q Consensus 270 ~~~~~~----~~i~~d~~i~~G~SGGPlvd~----~G~VVGI~s~~~~~~~g~~~aIPi 320 (443)
.+.... ..+..+++..+|+=||||+.. .|+++||+..+. .+.+|+.++
T Consensus 149 ~G~~~~~~~~~~~~Y~~pT~~G~CGs~li~~~~~~~~kIiGiHvaG~---g~~G~a~~l 204 (212)
T 2hal_A 149 DGTTVDLTVDQAWRGKGEGLPGMCGGALVSSNQSIQNAILGIHVAGG---NSILVAKLV 204 (212)
T ss_dssp TSCEEEEEEEEEEEEECCCCTTCTTCEEEESCGGGTTCEEEEEEEEE---TTEEEEEEC
T ss_pred CCcccccccceEEEEecCCCCCcCCCeEEEccCCCCceEEEEEeCcC---CCcEEEEee
Confidence 011122 578889999999999999974 799999999874 346777764
No 327
>4dcd_A Protease 3C, genome polyprotein; antiviral inhibitors, dipeptidyl inhib hydrolase-hydrolase inhibitor complex; HET: K36; 1.69A {Human poliovirus 1} PDB: 1l1n_A
Probab=97.31 E-value=0.013 Score=52.43 Aligned_cols=158 Identities=16% Similarity=0.183 Sum_probs=92.0
Q ss_pred HhCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEEE--EeecC--
Q 013444 133 RVCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGTV--LNADF-- 208 (443)
Q Consensus 133 ~~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~dg~~~~a~v--v~~d~-- 208 (443)
-+..-++.|++.. +.-||.-|..+ +.|-..|...+ ..+.| +|+.++..- ...+.
T Consensus 17 l~k~N~~~vtT~~---------G~ft~LgI~d~-~~viP~Ha~p~---------~~i~i---~G~~~~v~d~~~l~~~~g 74 (190)
T 4dcd_A 17 MAKRNIVTATTSK---------GEFTMLGVHDN-VAILPTHASPG---------ESIVI---DGKEVEILDAKALEDQAG 74 (190)
T ss_dssp HHHHHEEEEEETT---------EEEEEEEEEBT-EEEEEGGGCCC---------SEEEE---TTEEEEEEEEEEEECTTC
T ss_pred HHHcCeEEEEeCC---------eEEEEEEEECc-EEEEeCCCCCC---------cEEEE---CCEEEEeeEEEEEecCCC
Confidence 3445677777543 44688888866 99999995432 34443 465554321 12232
Q ss_pred -CCCEEEEEEcCCCCCCccccCCCCCCCCCCEEEEEecCCCCCCc-eEEEEEEeeecCccCCCCCCccceEEEEcccCCC
Q 013444 209 -HSDIAIVKINSKTPLPAAKLGTSSKLCPGDWVVAMGCPHSLQNT-VTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINA 286 (443)
Q Consensus 209 -~~DlAlLkl~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~-~t~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~ 286 (443)
..||++++++....+.-++---.+.......++.+=+-...... +..|.+........ .+......+..+++..+
T Consensus 75 v~lElt~V~l~r~~kFRDIr~fi~~~~~~~~~~~L~vn~~~~~~~~~~vg~v~~~g~i~l---sg~~t~r~l~Y~~pT~~ 151 (190)
T 4dcd_A 75 TNLEITIITLKRNEKFRDIRPHIPTQITETNDGVLIVNTSKYPNMYVPVGAVTEQGYLNL---GGRQTARTLMYNFPTRA 151 (190)
T ss_dssp CEEEEEEEEESSSCCBCCCGGGSCSSCCCEEEEEEEECSSSSTTEEEEEEEEEEEEEEEE---TTEEEEEEEEESSCCCT
T ss_pred CeEEEEEEEcCCCccccchhHhccccCCCCCceEEEEecCCCccEEEEeeeeEEeccccC---CCCcccceEEEccCCCC
Confidence 35999999997755543321111222334444443333333332 33344433332211 12234567889999999
Q ss_pred CCccceeeecCCCEEEEEEEEeecCCCeEEEEe
Q 013444 287 GNSGGPLVNIDGEIVGINIMKVAAADGLSFAVP 319 (443)
Q Consensus 287 G~SGGPlvd~~G~VVGI~s~~~~~~~g~~~aIP 319 (443)
|.=||||+. +|+++||+..+- ...+|+.+
T Consensus 152 G~CGg~l~~-~gkIlGIHvaG~---G~~G~aa~ 180 (190)
T 4dcd_A 152 GQCGGVITC-TGKVIGMHVGGN---GSHGFAAA 180 (190)
T ss_dssp TCTTCEEEE-TTEEEEEEEEEC---SSCEEEEE
T ss_pred CccCCEEEe-CCCEEEEEECCC---CCceEeee
Confidence 999999994 789999999873 34566654
No 328
>1cqq_A Type 2 rhinovirus 3C protease; viral protein, hydrolase; HET: AG7; 1.85A {Human rhinovirus 2} SCOP: b.47.1.4 PDB: 2xya_A*
Probab=97.29 E-value=0.024 Score=50.54 Aligned_cols=157 Identities=15% Similarity=0.120 Sum_probs=91.0
Q ss_pred HhCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEE--EEeecC--
Q 013444 133 RVCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGT--VLNADF-- 208 (443)
Q Consensus 133 ~~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~dg~~~~a~--vv~~d~-- 208 (443)
.+...++.|++.. +..|+.-|..+ ++|...|.... ..+.+ +|+.++.. ...+|+
T Consensus 10 l~~~n~~~i~~~~---------g~~t~Lgi~~~-~~lvP~Ha~~~---------~~i~i---~g~~v~i~d~~~l~d~~g 67 (180)
T 1cqq_A 10 LIKHNSCVITTEN---------GKFTGLGVYDR-FVVVPTHADPG---------KEIQV---DGITTKVIDSYDLYNKNG 67 (180)
T ss_dssp HHHHHEEEEEETT---------EEEEEEEEEBT-EEEEEGGGCCC---------SEEEE---TTEEEEEEEEEEEECTTS
T ss_pred HHHhCeEEEEEcC---------CcEEEEEEeeE-EEEEccCcCcc---------cEEEE---CCEEEEeccceEEEcCCC
Confidence 4455677777643 33778888877 99999999875 23322 44444322 222332
Q ss_pred -CCCEEEEEEcCCCCCCccc-cCCCCCCCCCCEEEEEecCCCCCC-ceEEEEEEeeecCccCCCCCCccceEEEEcccCC
Q 013444 209 -HSDIAIVKINSKTPLPAAK-LGTSSKLCPGDWVVAMGCPHSLQN-TVTAGIVSCVDRKSSDLGLGGMRREYLQTDCAIN 285 (443)
Q Consensus 209 -~~DlAlLkl~~~~~~~~~~-l~~s~~~~~G~~V~~iG~p~~~~~-~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~ 285 (443)
..||++++++...+++-+. +-. +........+++-+-..... .+..|.+....... . .+......+..+++..
T Consensus 68 ~~~El~lv~l~~~~kfrDi~kfip-~~~~~~~~~~l~~n~~~~~~~~v~~g~~~~~g~i~--~-~g~~~~r~l~Y~~pT~ 143 (180)
T 1cqq_A 68 IKLEITVLKLDRNEKFRDIRRYIP-NNEDDYPNCNLALLANQPEPTIINVGDVVSYGNIL--L-SGNQTARMLKYSYPTK 143 (180)
T ss_dssp CEEEEEEEEECSSCCBCCGGGGSC-SSCCCEEEEEEEECTTSSSCEEEEEEEEEECCCEE--E-TTEEECSEEEECCCCC
T ss_pred CeEEEEEEEcCCccccCccHhhcC-CCcCCCCceEEEEEcCCCceEEEEccceeeeeeEe--c-CCcEeccEEEecCCCC
Confidence 3699999998765555433 211 12211122333333322333 34555544322211 1 1122346789999999
Q ss_pred CCCccceeeecCCCEEEEEEEEeecCCCeEEEEe
Q 013444 286 AGNSGGPLVNIDGEIVGINIMKVAAADGLSFAVP 319 (443)
Q Consensus 286 ~G~SGGPlvd~~G~VVGI~s~~~~~~~g~~~aIP 319 (443)
.|+=||+|+. +|+++||+..+ . ...+|+.+
T Consensus 144 ~G~CGsvl~~-~gkIiGIHvAG-~--G~~G~aa~ 173 (180)
T 1cqq_A 144 SGYCGGVLYK-IGQVLGIHVGG-N--GRDGFSAM 173 (180)
T ss_dssp TTCTTCEEEE-TTEEEEEEEEE-C--SSCEEEEE
T ss_pred CCcCCCeEEE-CCCEEEEEECC-C--CCcEEEee
Confidence 9999999994 57999999987 2 34666654
No 329
>2b0f_A Picornain 3C (protease 3C) (P3C); beta barrel, hydrolase-hydrolase inhibitor complex; HET: CA1; NMR {Human rhinovirus 14} PDB: 2in2_A
Probab=97.17 E-value=0.011 Score=52.71 Aligned_cols=158 Identities=15% Similarity=0.264 Sum_probs=90.3
Q ss_pred HhCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCCCcEEE---E-EEEeec-
Q 013444 133 RVCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFE---G-TVLNAD- 207 (443)
Q Consensus 133 ~~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~dg~~~~---a-~vv~~d- 207 (443)
-+...++.|.+.. +.-||..|..+ +.|...|.... ..+.+ +|+.+. + ++...+
T Consensus 10 l~k~n~~~i~t~~---------g~~t~LgI~d~-~~vvP~Ha~~~---------~~i~i---~g~~~~v~d~~~l~~~~~ 67 (182)
T 2b0f_A 10 LLRKNIMTITTSK---------GEFTGLGIHDR-VCVIPTHAQPG---------DDVLV---NGQKIRVKDKYKLVDPEN 67 (182)
T ss_dssp HHHHHEEEEEETT---------EEEEEEEEEBT-EEEEESTTCCC---------SEEEE---TTEEEEEEEEEEEEETTT
T ss_pred HHhcCEEEEEeCC---------ccEEEEEEeee-EEEEecCCCCc---------cEEEE---CCEEEEeeeeeEEEcCCC
Confidence 3445567777543 22478888877 99999999664 23322 455432 1 222212
Q ss_pred CCCCEEEEEEcCCCCCCccccCCCCCCCCCCEEEEEecCCCCCC-ceEEEEEEeeecCccCCCCCCccceEEEEcccCCC
Q 013444 208 FHSDIAIVKINSKTPLPAAKLGTSSKLCPGDWVVAMGCPHSLQN-TVTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINA 286 (443)
Q Consensus 208 ~~~DlAlLkl~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~-~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~ 286 (443)
-..||++++++....++-++---++....-+.+.++ +-..... .+..|.+....... + .+.....++..+++...
T Consensus 68 ~~~eltlv~l~~~~kfRDIrkfi~~~~~~~~~~lv~-n~~~~p~~~~~vg~~~~~g~i~--l-~G~~t~~~~~Y~~pTk~ 143 (182)
T 2b0f_A 68 INLELTVLTLDRNEKFRDIRGFISEDLEGVDATLVV-HSNNFTNTILEVGPVTMAGLIN--L-SSTPTNRMIRYDYATKT 143 (182)
T ss_dssp EEEEEEEEEECCSSCBCCGGGTBCSSCCCSEEEEEE-ESSSCEEEEEEEEEEEEEEEEE--E-TTEEEEEEEEEESCCCT
T ss_pred CeeEEEEEECCCcccccchHHhcCCCCCCCceEEEE-EcCCCceEEEEecceEEeceEc--C-CCcEecceEEeccCCCC
Confidence 257999999987655543221111111111333333 3333222 23455544322211 1 12234567889999999
Q ss_pred CCccceeeecCCCEEEEEEEEeecCCCeEEEEeH
Q 013444 287 GNSGGPLVNIDGEIVGINIMKVAAADGLSFAVPI 320 (443)
Q Consensus 287 G~SGGPlvd~~G~VVGI~s~~~~~~~g~~~aIPi 320 (443)
|.=||||+. .|+++||++.+ +...+|+.++
T Consensus 144 G~CGgvl~~-~gkIlGIHvaG---~G~~Gfaa~l 173 (182)
T 2b0f_A 144 GQCGGVLCA-TGKIFGIHVGG---NGRQGFSAQL 173 (182)
T ss_dssp TCTTCEEEE-TTEEEEEEEEE---ETTEEEEEEC
T ss_pred cccCCeEEe-CCCEEEEEeCC---CCCceEehhh
Confidence 999999995 88999999987 2446777654
No 330
>2bhg_A Foot-and-mouth disease virus 3C protease; chymotrypsin-like cysteine protease, capsid protein, core protein; 1.9A {Foot-and-mouth disease virus} SCOP: b.47.1.4 PDB: 2j92_A 2wv4_A 2wv5_A
Probab=97.09 E-value=0.012 Score=53.75 Aligned_cols=157 Identities=18% Similarity=0.206 Sum_probs=87.1
Q ss_pred EEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCCCcEEE---EEEE----eecCC---CCEEEEEEcCCCCCCc
Q 013444 156 IGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFE---GTVL----NADFH---SDIAIVKINSKTPLPA 225 (443)
Q Consensus 156 ~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~dg~~~~---a~vv----~~d~~---~DlAlLkl~~~~~~~~ 225 (443)
..+|..|..+ ++|...|..... ...+.+ +++.+. ..+. ..+.. .||++++++....++-
T Consensus 31 ~~~~LgI~~r-~~l~P~H~~~~~-------~~~i~i---~g~~~~~~~~~~~~~e~~v~~~~~~~Dl~~~~l~~~~kfrd 99 (209)
T 2bhg_A 31 ICCATGVFGT-AYLVPRHLFAEK-------YDKIML---DGRAMTDSDYRVFEFEIKVKGQDMLSDAALMVLHRGNKVRD 99 (209)
T ss_dssp EEEEEEEEBT-EEEEEHHHHTSC-------CSEEEE---TTEEECGGGEEEECCEECCSSSCEECSEEEEEESSSCCBCC
T ss_pred EEEEeeEcCC-EEEEEcccCCCC-------CcEEEE---cCEEEEeeeeEEeeceeeecCCCCceeEEEEECCCCcccCc
Confidence 4567777766 999999998652 134443 333332 1222 23333 7999999986533332
Q ss_pred cc--cCCCCCCCCCCEEEEEecCCCCCCceEEEEEEeeecCccCCCCCCccceEEEEcccCCCCCccceeeec---CCCE
Q 013444 226 AK--LGTSSKLCPGDWVVAMGCPHSLQNTVTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAGNSGGPLVNI---DGEI 300 (443)
Q Consensus 226 ~~--l~~s~~~~~G~~V~~iG~p~~~~~~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvd~---~G~V 300 (443)
++ |.+......++.+..+-++.........|.+......... ..+.....++..+++..+|+=||+|+-. .|++
T Consensus 100 i~k~f~~~~~~~~~~~~~~~~n~~~~~~~~~~g~~~~~~~~~~~-~~G~~~~~~~~Y~~pT~~G~CGs~lv~~~~~~~kI 178 (209)
T 2bhg_A 100 ITKHFRDTARMKKGTPVVGVVNNADVGRLIFSGEALTYKDIVVS-MDGDTMPGLFAYKAATRAGYAGGAVLAKDGADTFI 178 (209)
T ss_dssp CGGGBCSSCEECTTCEEEEEEEETTTEEEEEEEEESSCEECCC------CCTTEEEEECCCCTTCTTCEEEEEETTEEEE
T ss_pred hhhhcccccccCCCCeEEEEeccCccCceeeeeeEEEccceeee-cCCCccccEEEEcCCCCCCcCCCEEEEecCCCceE
Confidence 21 3221111345557766666544233334433222221100 0112335678999999999999999743 5899
Q ss_pred EEEEEEEeecCCCeEEE--EeHHHHHHHH
Q 013444 301 VGINIMKVAAADGLSFA--VPIDSAAKII 327 (443)
Q Consensus 301 VGI~s~~~~~~~g~~~a--IPi~~i~~~l 327 (443)
+||++.+- .+.+|+ |+-+.+..+.
T Consensus 179 vGIHvaG~---g~~G~aa~l~r~~~~~~~ 204 (209)
T 2bhg_A 179 VGTHSAGG---NGVGYCSCVSRSMLQKMK 204 (209)
T ss_dssp EEEEEEEE---TTEEEEEECCHHHHHHHH
T ss_pred EEEEEccC---CCceEEEEcCHHHHHHHH
Confidence 99999873 334555 5444444443
No 331
>2pka_A Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_A 1hia_A
Probab=97.04 E-value=0.0027 Score=48.48 Aligned_cols=34 Identities=26% Similarity=0.242 Sum_probs=27.0
Q ss_pred CCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccC
Q 013444 135 CPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVD 177 (443)
Q Consensus 135 ~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~ 177 (443)
.|.+|.|... +...|.|.+|+++ +|||+|||+.+
T Consensus 12 ~Pw~v~l~~~--------~~~~CgGslIs~~-~VLTAAHC~~~ 45 (80)
T 2pka_A 12 HPWQVAIYHY--------SSFQCGGVLVNPK-WVLTAAHCKND 45 (80)
T ss_dssp CTTEEEEEET--------TEEEEEEEEEETT-EEEECGGGCCS
T ss_pred CCcEEEEEEC--------CceEEEEEEEcCC-EEEECHHHCCC
Confidence 4778888642 1256999999987 99999999965
No 332
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=97.04 E-value=9.2e-05 Score=74.56 Aligned_cols=53 Identities=13% Similarity=0.255 Sum_probs=0.0
Q ss_pred EEeEECCCCccccCCCCCCCEEEEECCEeeC--CHHHHHHHHhcCCCCeEEEEEEE
Q 013444 371 LVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQ--SITEIIEIMGDRVGEPLKVVVQR 424 (443)
Q Consensus 371 ~V~~v~~~spA~~aGl~~GDiI~~vng~~V~--s~~dl~~~l~~~~g~~v~l~v~R 424 (443)
+|..|.++|+|+++||++||+|++|||++|. +++++..++.. .++.+.|+|.+
T Consensus 318 ~I~~V~~gs~A~~aGL~~GD~Il~VNg~~v~~~s~~~~~~~l~~-~~~~v~L~V~p 372 (388)
T 3suz_A 318 IICSLMRGGIAERGGVRVGHRIIEINGQSVVATAHEKIVQALSN-SVGEIHMKTMP 372 (388)
T ss_dssp --------------------------------------------------------
T ss_pred EEEEeecCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHh-CCCeEEEEEEe
Confidence 7889999999999999999999999999996 56778777765 45677888865
No 333
>2ijd_1 Picornain 3C, RNA-directed RNA polymerase; RNA-dependent RNA polymerase, picornavirus, protease, hydrolase, transferase; 3.40A {Human poliovirus 1} SCOP: b.47.1.4 e.8.1.4
Probab=96.07 E-value=0.43 Score=50.87 Aligned_cols=158 Identities=16% Similarity=0.178 Sum_probs=86.7
Q ss_pred HhCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEE--EEeecC--
Q 013444 133 RVCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGT--VLNADF-- 208 (443)
Q Consensus 133 ~~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~dg~~~~a~--vv~~d~-- 208 (443)
.+...+|.|.+.. +.-+|..|..+ .+|+..|.... ..+.+ +|..+.-. ...+++
T Consensus 10 ~~~~n~~~~~~~~---------~~~~~l~i~~~-~~l~p~H~~~~---------~~~~i---~g~~~~~~~~~~~~~~~~ 67 (644)
T 2ijd_1 10 MAKRNIVTATTSK---------GEFTMLGVHDN-VAILPTHASPG---------ESIVI---DGKEVAILAAKALADQAG 67 (644)
T ss_dssp HHHHHEEEEEETT---------EEEEEEEEEBT-EEEEEGGGCCC---------SEEEE---TTEEEEEEECCEEECTTS
T ss_pred HHHcCEEEEEeCC---------cEEEEEEEece-EEEEccccCCC---------ceEEE---CCEEEEeccceeEEcCCC
Confidence 3444567776432 33567778766 99999998864 23322 23333211 112333
Q ss_pred -CCCEEEEEEcCCCCCCccc-cCCCCCCCCCCEEEEEecCCCCCC-ceEEEEEEeeecCccCCCCCCccceEEEEcccCC
Q 013444 209 -HSDIAIVKINSKTPLPAAK-LGTSSKLCPGDWVVAMGCPHSLQN-TVTAGIVSCVDRKSSDLGLGGMRREYLQTDCAIN 285 (443)
Q Consensus 209 -~~DlAlLkl~~~~~~~~~~-l~~s~~~~~G~~V~~iG~p~~~~~-~~t~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~ 285 (443)
..||++++++....++.++ +-. ..........++-....... .+..|.+....... ..+......+..+.+..
T Consensus 68 ~~~dl~~~~~~~~~~frdi~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~---~~g~~~~~~~~y~~~T~ 143 (644)
T 2ijd_1 68 TNLEITIITLKRNEKFRDIRPHIP-TQITETNDGVLIVNTSKYPNMYVPVGAVTEQGYLN---LGGRQTARTLMYNFPTR 143 (644)
T ss_dssp CEEEEEEEEECSSCCBCCCGGGSC-SSCCCEEEEEEEECSSSSTTEEEEEEEEEEEEEEC---CTTSCEEEEEEECSCCC
T ss_pred CceeEEEEECCCCCCcCChHHhcc-CCccCCCceEEEEcCCCCceEEEEeeeeeecccee---cCCCccccEEEEcCCCC
Confidence 3699999998654444332 211 11112222333222222222 23345554322211 11223456788999999
Q ss_pred CCCccceeeecCCCEEEEEEEEeecCCCeEEEEeH
Q 013444 286 AGNSGGPLVNIDGEIVGINIMKVAAADGLSFAVPI 320 (443)
Q Consensus 286 ~G~SGGPlvd~~G~VVGI~s~~~~~~~g~~~aIPi 320 (443)
+|+=|+||+. +|+||||+.++. ...+|+.++
T Consensus 144 ~G~CG~~l~~-~gkIvGiHvaG~---g~~g~a~~l 174 (644)
T 2ijd_1 144 AGQAGGVITC-TGKVIGMHVGGN---GSHGFAAAL 174 (644)
T ss_dssp TTCTTCEEEE-TTEEEEEEEEEC---SSCEEEEEC
T ss_pred CCCCCchhhh-CCcEEEEEEcCC---CCceEEEEc
Confidence 9999999985 799999999873 234566554
No 334
>1yph_E Chymotrypsin A, chain C; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1ca0_C 1cbw_C 1cho_G 1gct_C 1ab9_C* 1ggd_C* 1gha_G 1ghb_G* 1gmc_G 1gmd_G 1gmh_G 1hja_C 1mtn_C 1n8o_C 1vgc_C* 1gg6_C 2cha_C* 2gch_G 2gct_C 2gmt_C* ...
Probab=95.14 E-value=0.042 Score=43.47 Aligned_cols=49 Identities=24% Similarity=0.348 Sum_probs=35.0
Q ss_pred cCCCCCccceeeecC-C--CEEEEEEEEeecC--CCeEEEEeHHHHHHHHHHHH
Q 013444 283 AINAGNSGGPLVNID-G--EIVGINIMKVAAA--DGLSFAVPIDSAAKIIEQFK 331 (443)
Q Consensus 283 ~i~~G~SGGPlvd~~-G--~VVGI~s~~~~~~--~g~~~aIPi~~i~~~l~~l~ 331 (443)
..|.|+|||||+-.. | .++||++++..-. ..-+.+.-+....++|++..
T Consensus 41 ~~C~GDSGGPL~~~~~~~~~l~GIvS~g~~c~~~~~p~vyt~V~~y~~WI~~~~ 94 (97)
T 1yph_E 41 SSCMGDSGGPLVCKKNGAWTLVGIVSWGSSTCSTSTPGVYARVTALVNWVQQTL 94 (97)
T ss_dssp BCCTTCTTCEEEEEETTEEEEEEEEEECCTTCCTTSEEEEEEHHHHHHHHHHHH
T ss_pred CCCcCCCCCcEEEEeCCeEEEEEEEEeCCCCCCCCCCeEEEEHHHhHHHHHHHH
Confidence 578999999998432 3 6999999975321 22455677778888887654
No 335
>1wxr_A Haemoglobin protease; hemoglobine protease, autotransporter, beta helix, heme uptake, spate, hydrolase; 2.20A {Escherichia coli} PDB: 3ak5_A
Probab=93.06 E-value=0.37 Score=53.43 Aligned_cols=80 Identities=14% Similarity=0.157 Sum_probs=48.8
Q ss_pred cEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCCC-cEEEEEEEee-cCCCCEEEEEEcCC-CCCCccccCCC
Q 013444 155 GIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDG-RTFEGTVLNA-DFHSDIAIVKINSK-TPLPAAKLGTS 231 (443)
Q Consensus 155 ~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~dg-~~~~a~vv~~-d~~~DlAlLkl~~~-~~~~~~~l~~s 231 (443)
..|.+.+|+++ ||+|.+|.... -.|.|.++ ..|.. +... .+..|+++.|++.. ....|+.+...
T Consensus 56 ~~G~aTLI~pq-YiVSvaHn~gy-----------~~v~fG~~~n~Y~i-V~rnn~~~~Dy~~pRL~K~VTEvaP~~~t~~ 122 (1048)
T 1wxr_A 56 EIGVATLINPQ-YIASVKHNGGY-----------TNVSFGDGENRYNI-VDRNNAPSLDFHAPRLDKLVTEVAPTAVTAQ 122 (1048)
T ss_dssp TTCCCEEEETT-EEEBCTTCCSC-----------CEECCTTSCCCEEE-EECCBCSSSSCBCCEESSCCCSSCCCCBCSS
T ss_pred CCceEEEEcCc-EEEEeeecCCC-----------ceEEeCCCcceEEE-EeeCCCCCCCeeeeecccccccccceeeccc
Confidence 44788899988 99999995432 13555543 35544 3322 23459999999864 33444444322
Q ss_pred C-------CCCCCCEEEEEecCC
Q 013444 232 S-------KLCPGDWVVAMGCPH 247 (443)
Q Consensus 232 ~-------~~~~G~~V~~iG~p~ 247 (443)
. ........+.+|...
T Consensus 123 g~~~~~y~d~ery~~f~RvGsG~ 145 (1048)
T 1wxr_A 123 GAVAGAYLDKERYPVFYRLGSGT 145 (1048)
T ss_dssp CSCTTGGGCTTTCCCEEEEECSC
T ss_pred cCccccccccccCceEEEECCcE
Confidence 1 234566777888654
No 336
>4ash_A NS6 protease; hydrolase, trypsin-like, calicivirus; 1.58A {Murine norovirus 1}
Probab=93.02 E-value=3.4 Score=35.00 Aligned_cols=142 Identities=20% Similarity=0.226 Sum_probs=75.5
Q ss_pred cEEEEEEEeCCCEEEeccccccCCCCC-CCCCCceEEEEeCCCcEEEEEEEeecCCCCEEEEEEcCC--CCCCccccCCC
Q 013444 155 GIGSGAIVDADGTILTCAHVVVDFHGS-RALPKGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINSK--TPLPAAKLGTS 231 (443)
Q Consensus 155 ~~GSGfiI~~~G~ILTaaHvv~~~~~~-~~~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkl~~~--~~~~~~~l~~s 231 (443)
+.|=||.|+.. ..+|+-||+...... -..+...+.| +..-+++.+++..+ .++.-..|..
T Consensus 15 gsgwgfwVS~~-~fiTaTHV~p~~~~eifG~p~~~i~v---------------~~~GEf~~~rfp~~~rpdvsgmiLEe- 77 (185)
T 4ash_A 15 GTGWGFWVSGH-VFITAKHVAPPKGTEIFGRKPGDFTV---------------TSSGDFLKYYFTSAVRPDIPAMVLEN- 77 (185)
T ss_dssp TTEEEEESSSS-EEEEEGGGSCCTTCCBTTBCTTSEEE---------------EEETTEEEEEESSCSCTTSCCCEECS-
T ss_pred cCceEEEEccc-EEEEEEeecCCCchhhcCCccceEEE---------------eecCcEEEEEcCCCcCCCCcceEEec-
Confidence 44779999987 999999999543211 1111223333 33347888888754 3455555533
Q ss_pred CCCCCCCEEEEEec-CCCC--CCceEEEEEEeeecCccCCCCCCccceEEE-------EcccCCCCCccceeeecCC---
Q 013444 232 SKLCPGDWVVAMGC-PHSL--QNTVTAGIVSCVDRKSSDLGLGGMRREYLQ-------TDCAINAGNSGGPLVNIDG--- 298 (443)
Q Consensus 232 ~~~~~G~~V~~iG~-p~~~--~~~~t~G~Vs~~~~~~~~~~~~~~~~~~i~-------~d~~i~~G~SGGPlvd~~G--- 298 (443)
....|+-+.++=. +.+. ...+.-|.+......-.- .++ ...++. .|-...||+-|.|-+-..|
T Consensus 78 -g~peGtV~svlikR~sgeliPlavRmgt~as~kIqGk~--v~g-qtGmlltganaK~mdLGT~PGDCGcPYvykrgn~~ 153 (185)
T 4ash_A 78 -GCQEGVVASVLVKRASGEMLALAVRMGSQAAIKIGSAV--VHG-QTGMLLTGSNAKAQDLGTIPGDAGCPYVYKKGNTW 153 (185)
T ss_dssp -SCCTTCEEEEEEECTTCCEEEEEEEEEEEEEEEETTEE--EEE-EEEEECC-------CCSCCTTCTTCEEEEEETTEE
T ss_pred -CCCCCcEEEEEEecCCCCcceeEEEecceeeeEEeeeE--ecc-eeeeEEecCCcccCcCCCCCCCCCCceEEeeCCce
Confidence 3345776655432 2221 123333433332221100 000 011222 2445689999999986555
Q ss_pred CEEEEEEEEeecCCCeEEE
Q 013444 299 EIVGINIMKVAAADGLSFA 317 (443)
Q Consensus 299 ~VVGI~s~~~~~~~g~~~a 317 (443)
-|+||+..........-.+
T Consensus 154 vv~GVHtAatr~gNtVica 172 (185)
T 4ash_A 154 VVIGVHVAATRSGNTVIAA 172 (185)
T ss_dssp EEEEEEEEECSSSSEEEEE
T ss_pred EEEEEEEeeccCCCEEEEE
Confidence 4889998876554433333
No 337
>2yew_A Capsid protein, coat protein; alphavirus, molecular dynamics; 5.00A {Barmah forest virus}
Probab=92.28 E-value=0.15 Score=45.85 Aligned_cols=34 Identities=21% Similarity=0.342 Sum_probs=27.7
Q ss_pred cccCCCCCccceeeecCCCEEEEEEEEeecCCCe
Q 013444 281 DCAINAGNSGGPLVNIDGEIVGINIMKVAAADGL 314 (443)
Q Consensus 281 d~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~g~ 314 (443)
...-.+|+||-|+||..|+||+|+-.+..+....
T Consensus 197 ~G~G~~GDSGRpI~DN~GrVVaIVLGGanEG~RT 230 (253)
T 2yew_A 197 TGSGKPGDSGRPIFDNTGKVVAIVLGGANEGART 230 (253)
T ss_dssp TTSCCSSCTTCEEECSSCBEEEEEEEEEECSSEE
T ss_pred cCCCCCCCCCCccccCCCcEEEEEecCCCcCCce
Confidence 4455789999999999999999999887665433
No 338
>1ep5_B Capsid protein C, coat protein C; beta barrel, hydrolase; 2.30A {Venezuelan equine encephalitis virus} SCOP: b.47.1.3 PDB: 1ep6_A 3j0c_C
Probab=92.08 E-value=0.33 Score=40.01 Aligned_cols=34 Identities=24% Similarity=0.386 Sum_probs=27.7
Q ss_pred EEcccCCCCCccceeeecCCCEEEEEEEEeecCC
Q 013444 279 QTDCAINAGNSGGPLVNIDGEIVGINIMKVAAAD 312 (443)
Q Consensus 279 ~~d~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~ 312 (443)
.-...-.+|+||-|++|..|+||+|+-.+..+..
T Consensus 98 ip~G~g~~GdSGrpI~Dn~GrVVaIVlGGa~eg~ 131 (157)
T 1ep5_B 98 VPKGVGAKGDSGRPILDNQGRVVAIVLGGVNEGS 131 (157)
T ss_dssp EETTCCCTTCTTCEEECTTSCEEEEEEEEEEETT
T ss_pred eccCCCCCCCCCCccCcCCCcEEEEEecCCCCCC
Confidence 3445567899999999999999999988776543
No 339
>1svp_A Sindbis virus capsid protein; chymotrypsin-like serine, mutant, coat protein, viral protein; 2.00A {Sindbis virus} SCOP: b.47.1.3 PDB: 1kxb_A 1kxa_A 2snw_A 1kxc_A 1kxd_A 1kxe_A 2snv_A 1z8y_Q 1wyk_A
Probab=92.05 E-value=0.2 Score=41.48 Aligned_cols=33 Identities=18% Similarity=0.354 Sum_probs=27.0
Q ss_pred EcccCCCCCccceeeecCCCEEEEEEEEeecCC
Q 013444 280 TDCAINAGNSGGPLVNIDGEIVGINIMKVAAAD 312 (443)
Q Consensus 280 ~d~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~ 312 (443)
-...-.+|+||-|++|..|+||+|+-.+..+..
T Consensus 101 p~GvG~~GDSGRpI~DN~GrVVaivlgg~~eg~ 133 (161)
T 1svp_A 101 PRGVGGRGDAGRPIMDNSGRVVAIVLGGADEGT 133 (161)
T ss_dssp ETTSCCTTCTTCEEECTTSCEEEEEEEEEECSS
T ss_pred cccCCCCCCCCCccCcCCCcEEEEEecCCCCCC
Confidence 344557899999999999999999988776543
No 340
>1vcp_A Semliki forest virus capsid protein; virus coat protein, polyprotein, transmembrane, glycoprotein, nucleocapsid protein, viral protein; 3.00A {Semliki forest virus} SCOP: b.47.1.3 PDB: 1dyl_A 1vcq_A
Probab=91.98 E-value=0.39 Score=39.13 Aligned_cols=34 Identities=24% Similarity=0.364 Sum_probs=27.6
Q ss_pred EEcccCCCCCccceeeecCCCEEEEEEEEeecCC
Q 013444 279 QTDCAINAGNSGGPLVNIDGEIVGINIMKVAAAD 312 (443)
Q Consensus 279 ~~d~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~ 312 (443)
.-...-.+|+||-|++|..|+||+|+-.+..+..
T Consensus 91 vp~G~g~~GdSGrpI~Dn~GrVVaIVlGG~~eg~ 124 (149)
T 1vcp_A 91 IPTGAGKPGDSGRPIFDNKGRVVAIVLGGANEGS 124 (149)
T ss_dssp EETTSCCTTCTTCEEECTTSCEEEEEEEEEECSS
T ss_pred ecccCCCCCCCCCccCcCCCcEEEEEecCCCCCC
Confidence 3344567899999999999999999988776544
No 341
>4agk_A Capsid protein, coat protein, C; hydrolase, viral protein; 1.81A {Aura virus} PDB: 4agj_A 1kxa_A 2snw_A 1svp_A 1kxb_A 1kxc_A 1kxd_A 1kxe_A 2snv_A 1z8y_Q 1wyk_A
Probab=91.80 E-value=0.41 Score=39.49 Aligned_cols=32 Identities=25% Similarity=0.423 Sum_probs=26.7
Q ss_pred EcccCCCCCccceeeecCCCEEEEEEEEeecC
Q 013444 280 TDCAINAGNSGGPLVNIDGEIVGINIMKVAAA 311 (443)
Q Consensus 280 ~d~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~ 311 (443)
-.....+|+||-|++|..|+||+|+-.+..+.
T Consensus 100 p~g~g~~GdSGrPi~Dn~GrVVaIVlGG~neG 131 (158)
T 4agk_A 100 PTGAGGPGDSGRPILDNSGKVVAIVLGGANEG 131 (158)
T ss_dssp ETTSSCTTCTTCEEECTTSCEEEEEEEEEECS
T ss_pred ecccCCCCCCCCccccCCCCEEEEEecCCCcC
Confidence 34456789999999999999999998877654
No 342
>1kxf_A Sindbis virus capsid protein; chymotrypsin-like serine proteinase, wild type, viral protein; 2.38A {Sindbis virus} SCOP: b.47.1.3 PDB: 1ld4_A 3j0f_A
Probab=91.58 E-value=0.19 Score=45.63 Aligned_cols=34 Identities=21% Similarity=0.331 Sum_probs=27.6
Q ss_pred cccCCCCCccceeeecCCCEEEEEEEEeecCCCe
Q 013444 281 DCAINAGNSGGPLVNIDGEIVGINIMKVAAADGL 314 (443)
Q Consensus 281 d~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~g~ 314 (443)
...-.+|+||-|++|..|+||+|+-.+..+....
T Consensus 207 ~G~G~~GDSGRpI~DN~GrVVaIVLGGaneG~RT 240 (264)
T 1kxf_A 207 RGVGGRGDSGRPIMDNSGRVVAIVLGGADEGTRT 240 (264)
T ss_dssp TTSCCTTCTTCEEECTTSCEEEEEEEEEEETTEE
T ss_pred ccCCCCCCCCCccccCCCcEEEEEecCCCcCCce
Confidence 4455789999999999999999999887664433
No 343
>3e90_B NS3 protease; trypsin-like serine protease, protease inhibitor, catalytic histidine, induced FIT, ATP-binding, capsid protein, helicase; HET: NKK; 2.45A {West nile virus} SCOP: b.47.1.3
Probab=90.49 E-value=0.68 Score=40.72 Aligned_cols=135 Identities=17% Similarity=0.180 Sum_probs=77.4
Q ss_pred HhCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEEEEeecCCCCE
Q 013444 133 RVCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGTVLNADFHSDI 212 (443)
Q Consensus 133 ~~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~dg~~~~a~vv~~d~~~Dl 212 (443)
.+..-|-+|....-+ .....|-|+.- +|.+=|=.||-.++. +.. +++.+ .....|-..|+
T Consensus 21 ~l~dGVYRI~~~gl~----G~~Q~GVGv~k--~GVFHTMWHVTrGa~-----------l~~-~g~~l--~P~WasV~~Dl 80 (198)
T 3e90_B 21 DTTTGVYRIMTRGLL----GSYQAGAGVMV--EGVFHTLWHTTKGAA-----------LMS-GEGRL--DPYWGSVKEDR 80 (198)
T ss_dssp CCCSEEEEEEEEETT----EEEEEEEEEEE--TTEEEECHHHHTTCC-----------EEE-TTEEE--CEEEEETTTTE
T ss_pred cCCCceEEEEecccc----ccceeeeEEee--CCEEEeeeeecCcce-----------EEE-CCcEe--cceeehheece
Confidence 456778888765432 22244666655 589999999998852 222 23332 22344556665
Q ss_pred EEEEEcCCCCCCccccCCCCCCCCCCEEEEEecCCCCCCc---eEEEEEEeeecCccCCCCCCccceEEEEcccCCCCCc
Q 013444 213 AIVKINSKTPLPAAKLGTSSKLCPGDWVVAMGCPHSLQNT---VTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAGNS 289 (443)
Q Consensus 213 AlLkl~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~---~t~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~S 289 (443)
+ .+-. +-+|. ....-.+.|.++.++.+.... ...|++.-. . .++--..-...+|.|
T Consensus 81 i--sYGG-----~WkL~--~~W~g~~eVQl~Av~Pgk~~~~~Qt~PG~f~~~----------~--g~iGaV~lD~p~GTS 139 (198)
T 3e90_B 81 L--CYGG-----PWKLQ--HKWNGQDEVQMIVVEPGKNVKNVRTKPGVFKTP----------E--GEIGAVTLDFPTGTS 139 (198)
T ss_dssp E--EESS-----SCCCC--CCCCSSSCEEEEECCTTSCCEEEEECCEEEEET----------T--EEEEEECCCCCTTCT
T ss_pred e--ecCC-----cccCC--cccCCCceEEEEEECCCCceEEEEeCCeEEEcC----------C--CeEEEEECCCCCCCC
Confidence 3 3332 23342 223333778888887664422 223333211 0 122233444568999
Q ss_pred cceeeecCCCEEEEEEEEe
Q 013444 290 GGPLVNIDGEIVGINIMKV 308 (443)
Q Consensus 290 GGPlvd~~G~VVGI~s~~~ 308 (443)
|+|++|.+|+|||+.-.+.
T Consensus 140 GSPIin~~G~VVGLYGNGv 158 (198)
T 3e90_B 140 GSPIVDKNGDVIGLYGNGV 158 (198)
T ss_dssp TCEEECTTCCEEEECCCEE
T ss_pred CCceecCCCcEEEEecceE
Confidence 9999999999999975544
No 344
>3u1j_B Serine protease NS3; serine protease, ER MEM hydrolase-hydrolase inhibitor complex; 1.80A {Dengue virus 3} SCOP: b.47.1.3 PDB: 3u1i_B
Probab=90.16 E-value=0.81 Score=40.06 Aligned_cols=135 Identities=19% Similarity=0.264 Sum_probs=76.8
Q ss_pred HhCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEEEEeecCCCCE
Q 013444 133 RVCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGTVLNADFHSDI 212 (443)
Q Consensus 133 ~~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~dg~~~~a~vv~~d~~~Dl 212 (443)
.+..-|-+|....-+ .....|-|+.- +|.+=|=.||-.++. +.. +++.+ .....|-..|+
T Consensus 26 ~~~dGVYRI~~~gl~----G~~Q~GVGv~k--~GVFHTMWHVTrGa~-----------l~~-~g~~l--~P~wasV~~Dl 85 (191)
T 3u1j_B 26 ELEEGVYRIKQQGIF----GKTQVGVGVQK--EGVFHTMWHVTRGAV-----------LTH-NGKRL--EPNWASVKKDL 85 (191)
T ss_dssp CCCSEEEEEEEEETT----EEEEEEEEEEE--TTEEEEEHHHHTTCC-----------EEE-TTEEE--CEEEEETTTTE
T ss_pred cCCCceEEEEecccc----ccceeeeEEee--CCEEEeeeeecCcce-----------EEE-CCcEe--cceeecceece
Confidence 456678888765432 22244666655 589999999998852 222 23332 22344556665
Q ss_pred EEEEEcCCCCCCccccCCCCCCCCCCEEEEEecCCCCCCc---eEEEEEEeeecCccCCCCCCccceEEEEcccCCCCCc
Q 013444 213 AIVKINSKTPLPAAKLGTSSKLCPGDWVVAMGCPHSLQNT---VTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAGNS 289 (443)
Q Consensus 213 AlLkl~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~---~t~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~S 289 (443)
+ .+-. +-+|. ..-.-.+.|.++.++.+.... ...|++.- .. .++--......+|.|
T Consensus 86 i--sYGG-----~WkL~--~~W~g~~eVQl~Av~Pgk~~~~~Qt~PG~f~~----------~~--g~iGaV~lD~p~GTS 144 (191)
T 3u1j_B 86 I--SYGG-----GWRLS--AQWQKGEEVQVIAVEPGKNPKNFQTMPGTFQT----------TT--GEIGAIALDFKPGTS 144 (191)
T ss_dssp E--EESS-----SCCCC--CCCCTTCCEEEEECCTTSCCEEEEECCEEEEC----------SS--CEEEEECCCCCTTCT
T ss_pred e--ecCC-----cccCC--cccCCCceEEEEEECCCCceEEEEeCCeEEEc----------CC--CeEEEEECCCCCCCC
Confidence 3 3332 22332 122334678888887664422 22333321 01 122233444568999
Q ss_pred cceeeecCCCEEEEEEEEe
Q 013444 290 GGPLVNIDGEIVGINIMKV 308 (443)
Q Consensus 290 GGPlvd~~G~VVGI~s~~~ 308 (443)
|+|++|.+|+|||+.-.+.
T Consensus 145 GSPIin~~G~VVGLYGNG~ 163 (191)
T 3u1j_B 145 GSPIINREGKVVGLYGNGV 163 (191)
T ss_dssp TCEEECTTSCEEEECCBEE
T ss_pred CCceecCCCcEEEEecCeE
Confidence 9999999999999975544
No 345
>2ggv_B NS3, non-structural protein 3; beta barrel, serine protease, viral protease, flavivirus, hydrolase; 1.80A {West nile virus} PDB: 2ijo_B
Probab=89.54 E-value=0.34 Score=42.21 Aligned_cols=135 Identities=16% Similarity=0.159 Sum_probs=76.2
Q ss_pred HhCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEEEEeecCCCCE
Q 013444 133 RVCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGTVLNADFHSDI 212 (443)
Q Consensus 133 ~~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~dg~~~~a~vv~~d~~~Dl 212 (443)
.+..-|-+|....-+ .....|-|+.- +|.+=|=.||-.++. +.. +++.+ .....|-..|+
T Consensus 16 ~l~dGvYRI~~~gl~----G~~Q~GVGv~~--~GVFHTmWHVTrGa~-----------L~~-~g~~l--~P~wasV~~Dl 75 (185)
T 2ggv_B 16 DTTTGVYRIMTRGLL----GSYQAGAGVMV--EGVFHTLWATTKGAA-----------LMS-GEGRL--DPYWGSVKEDR 75 (185)
T ss_dssp CCCSEEEEEEEECSS----SEEEEEEEEEE--TTEEEECHHHHTTCC-----------EEE-TTEEE--CEEEEETTTTE
T ss_pred cCCCcEEEEEecccc----ccceeeeEEee--CCEEEeeeeecCcce-----------EEE-CCcEe--cceeehhhcce
Confidence 356677887654422 22244667665 589999999998852 222 33332 22344556665
Q ss_pred EEEEEcCCCCCCccccCCCCCCCCCCEEEEEecCCCCCCc---eEEEEEEeeecCccCCCCCCccceEEEEcccCCCCCc
Q 013444 213 AIVKINSKTPLPAAKLGTSSKLCPGDWVVAMGCPHSLQNT---VTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAGNS 289 (443)
Q Consensus 213 AlLkl~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~---~t~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~S 289 (443)
+ .+-. +-+|. ....-+++|.++.++.+.... ...|++.-. . .++--....+.+|.|
T Consensus 76 i--sYGG-----~WkL~--~kW~g~~eVql~av~Pgk~~~nvQt~Pg~f~~~----------~--GeigAI~lD~p~GTS 134 (185)
T 2ggv_B 76 L--CYGG-----PWQLQ--HKWNGQDEVQMIVVEPGRNVKNVQTKPGVFKTP----------E--GEIGAVTLDFPTGTS 134 (185)
T ss_dssp E--EESS-----SCCCC--CCCCSSSCEEEEECCTTSCCEEEEECCEEEEET----------T--EEEEEECCCCCGGGT
T ss_pred e--ecCC-----cccCc--cccCCCceEEEEEECCCCceEEEEccCceEecC----------C--CeEEEEECCCCCCCC
Confidence 3 3332 12231 233445777777776654321 112222110 0 122233345668999
Q ss_pred cceeeecCCCEEEEEEEEe
Q 013444 290 GGPLVNIDGEIVGINIMKV 308 (443)
Q Consensus 290 GGPlvd~~G~VVGI~s~~~ 308 (443)
|+|++|.+|+|||+.-.+.
T Consensus 135 GSPIin~~G~vvGLYGNGv 153 (185)
T 2ggv_B 135 GSPIVDKNGDVIGLYGNGV 153 (185)
T ss_dssp TCEEECTTSCEEEEEEEEE
T ss_pred CCceEcCCCcEEEEecceE
Confidence 9999999999999987664
No 346
>2fp7_B Serine protease NS3; flavivirus, NS3 protease, NS2B cofactor; HET: OAR; 1.68A {West nile virus} SCOP: b.47.1.3
Probab=89.49 E-value=0.23 Score=42.84 Aligned_cols=133 Identities=17% Similarity=0.189 Sum_probs=70.8
Q ss_pred hCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEEEEeecCCCCEE
Q 013444 134 VCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGTVLNADFHSDIA 213 (443)
Q Consensus 134 ~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~dg~~~~a~vv~~d~~~DlA 213 (443)
+..-|-+|.... ++.....|-|+.- +|.+=|=.||-.++. +.. +++.+ .....|-..|++
T Consensus 3 l~dGvYRI~~~g----l~g~~Q~GVGv~~--~GVFHTmWHVTrGa~-----------l~~-~g~~~--~P~wa~V~~Dli 62 (172)
T 2fp7_B 3 TTTGVYRIMTRG----LLGSYQAGAGVMV--EGVFHTLWHTTKGAA-----------LMS-GEGRL--DPYWGSVKEDRL 62 (172)
T ss_dssp -CCEEEEEEC---------CCEEEEEEEE--TTEEEEEHHHHTTCC-----------EEE-TTEEE--CEEEEETTTTEE
T ss_pred CCCcEEEEEecc----ccccceeeeEEee--CCEEEeeeeecCCce-----------EEE-CCcEe--cceeehheecee
Confidence 344566665433 2223345777665 589999999998852 222 23332 223445556653
Q ss_pred EEEEcCCCCCCccccCCCCCCCCCCEEEEEecCCCCCCc---eEEEEEEeeecCccCCCCCCccceEEEEcccCCCCCcc
Q 013444 214 IVKINSKTPLPAAKLGTSSKLCPGDWVVAMGCPHSLQNT---VTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAGNSG 290 (443)
Q Consensus 214 lLkl~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~---~t~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SG 290 (443)
.+-. +-+|. ....-++.|.++.++.+.... ...|+..-. . .++--......+|.||
T Consensus 63 --sYGG-----~WkL~--~kW~g~~eVql~a~~Pgk~~~n~qt~Pg~f~~~----------~--GeigaI~lD~p~GtSG 121 (172)
T 2fp7_B 63 --CYGG-----PWKLQ--HKWNGHDEVQMIVVEPGKNVKNVQTKPGVFKTP----------E--GEIGAVTLDYPTGTSG 121 (172)
T ss_dssp --EESS-----SCCCC--CCCCSSSCEEEEECCTTSCCEEEEECCEEEEET----------T--EEEEEECCCCCGGGTT
T ss_pred --ecCC-----ccccC--cccCCCceEEEEEECCCCceEEEEccCceEecC----------C--CeEEEEECCCCCCCCC
Confidence 3332 22231 233445677777776653321 112222110 0 1222333456689999
Q ss_pred ceeeecCCCEEEEEEEE
Q 013444 291 GPLVNIDGEIVGINIMK 307 (443)
Q Consensus 291 GPlvd~~G~VVGI~s~~ 307 (443)
+|++|.+|+|||+.-.+
T Consensus 122 SPIin~~G~vVGLYGNG 138 (172)
T 2fp7_B 122 SPIVDKNGDVIGLYGNG 138 (172)
T ss_dssp CEEECTTSCEEEESCCE
T ss_pred CceEccCCcEEEEecce
Confidence 99999999999996554
No 347
>3lkw_A Fusion protein of nonstructural protein 2B and nonstructural protein 3; viral protease, serine protease, NS3 protease, NS2B cofactor; 2.00A {Dengue virus 1} PDB: 3l6p_A
Probab=89.17 E-value=0.94 Score=40.96 Aligned_cols=131 Identities=18% Similarity=0.249 Sum_probs=73.5
Q ss_pred ceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEEEEeecCCCCEEEEE
Q 013444 137 AVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGTVLNADFHSDIAIVK 216 (443)
Q Consensus 137 SVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLk 216 (443)
-|-+|....-+ .....|-|+.- +|.+=|=.||-.++. +.. +++.+ .....|-..|++ .
T Consensus 71 GvYRI~~~gl~----G~~Q~GVGv~~--~GVFHTmWHVTrGa~-----------l~~-~g~~~--~P~wa~V~~Dli--s 128 (236)
T 3lkw_A 71 GIYRILQRGLL----GRSQVGVGVFQ--EGVFHTMWHVTRGAV-----------LMY-QGKRL--EPSWASVKKDLI--S 128 (236)
T ss_dssp EEEEEEEEETT----EEEEEEEEEEE--TTEEEECHHHHTTCC-----------EEE-TTEEE--CEEEEETTTTEE--E
T ss_pred cEEEEEecccc----ccceeeeEEee--CCEEEEeeeecCcce-----------EEE-CCcEe--cceeehheecee--e
Confidence 67777654422 22244666655 589999999998852 222 23332 223445556653 3
Q ss_pred EcCCCCCCccccCCCCCCCCCCEEEEEecCCCCCCc---eEEEEEEeeecCccCCCCCCccceEEEEcccCCCCCcccee
Q 013444 217 INSKTPLPAAKLGTSSKLCPGDWVVAMGCPHSLQNT---VTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAGNSGGPL 293 (443)
Q Consensus 217 l~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~---~t~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPl 293 (443)
+-. +-+|. ..-.-.+.|.++.++.+.... ...|++.-. . .++--..-...+|.||+|+
T Consensus 129 YGG-----~WkL~--~~W~g~~eVqv~A~~Pg~~~~~~qt~PG~~~~~----------~--g~igav~lD~p~GTSGSPI 189 (236)
T 3lkw_A 129 YGG-----GWRFQ--GSWNAGEEVQVIAVEPGKNPKNVQTAPGTFKTP----------E--GEVGAIALDFKPGTAGSPI 189 (236)
T ss_dssp ESS-----SCCCC--CCCCTTCCEEEEECCTTSCCEEEEECCEEEEET----------T--EEEEEECCCCCTTCTTCEE
T ss_pred cCC-----CccCC--cccCCCceEEEEEECCCCceEEEEeCCeEEEcC----------C--CeEEEEECCCCCCCCCCce
Confidence 332 22332 122334678888887664422 223333211 0 1222333445689999999
Q ss_pred eecCCCEEEEEEEEe
Q 013444 294 VNIDGEIVGINIMKV 308 (443)
Q Consensus 294 vd~~G~VVGI~s~~~ 308 (443)
+|.+|+|||+.-.+.
T Consensus 190 in~~G~VvGLYGnG~ 204 (236)
T 3lkw_A 190 VNREGKIVGLYGNGV 204 (236)
T ss_dssp ECTTSCEEEESCCEE
T ss_pred ecCCCcEEEEecceE
Confidence 999999999965443
No 348
>2fom_B Polyprotein; flavivirus, NS3 protease, NS2B cofactor, viral protein-prote complex; 1.50A {Dengue virus 2} SCOP: b.47.1.3 PDB: 1df9_A 2qid_A 1bef_A
Probab=88.91 E-value=0.27 Score=43.00 Aligned_cols=135 Identities=19% Similarity=0.239 Sum_probs=74.8
Q ss_pred HHhCCceEEEEecccccccccCCcEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEEEEeecCCCC
Q 013444 132 ARVCPAVVNLSAPREFLGILSGRGIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGTVLNADFHSD 211 (443)
Q Consensus 132 ~~~~pSVV~I~~~~~~~~~~~~~~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~dg~~~~a~vv~~d~~~D 211 (443)
..+..-|-+|....-+ .....|-|+.- +|.+=|=.||-.++. +.. +++.+ .....|-..|
T Consensus 16 ~~l~dGvYRI~~~gl~----G~~Q~GVGv~~--~GVFHTmWHVTrGa~-----------l~~-~g~~l--~P~wa~V~~D 75 (185)
T 2fom_B 16 AELEDGAYRIKQKGIL----GYSQIGAGVYK--EGTFHTMWHVTRGAV-----------LMH-KGKRI--EPSWADVKKD 75 (185)
T ss_dssp --CCSEEEEEEEEETT----EEEEEEEEEEE--TTEEEEEHHHHTTCC-----------EEE-TTEEE--CEEEEETTTT
T ss_pred ccCCCcEEEEEecccc----ccceeeeEEee--CCEEEeeeeecCcce-----------EEE-CCcEe--cceeehheec
Confidence 3477788888755422 22244666665 589999999998852 222 23332 2234455566
Q ss_pred EEEEEEcCCCCCCccccCCCCCCCCCCEEEEEecCCCCCCc---eEEEEEEeeecCccCCCCCCccceEEEEcccCCCCC
Q 013444 212 IAIVKINSKTPLPAAKLGTSSKLCPGDWVVAMGCPHSLQNT---VTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAGN 288 (443)
Q Consensus 212 lAlLkl~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~~~~~~---~t~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~ 288 (443)
++ .+-. +-+|. ....-++.|.++.++.+.... ...|+..- .. .++--......+|.
T Consensus 76 li--sYGG-----~WkL~--~kW~g~~eVql~av~Pgk~~~nvQt~Pg~f~~----------~~--GeigaI~lD~p~GT 134 (185)
T 2fom_B 76 LI--SYGG-----GWKLE--GEWKEGEEVQVLALEPGKNPRAVQTKPGLFKT----------NT--GTIGAVSLDFSPGT 134 (185)
T ss_dssp EE--EESS-----SCCCC--CCCCTTCCEEEEECCTTSCCEEEEECCEEEEC----------SS--CEEEEECCCSCGGG
T ss_pred ee--ecCC-----cccCc--cccCCCceEEEEEECCCCceEEEEcCCceeec----------CC--CeEEEEECCCCCCC
Confidence 53 3332 22231 123345677777776654321 11222210 01 12223334566899
Q ss_pred ccceeeecCCCEEEEEEEE
Q 013444 289 SGGPLVNIDGEIVGINIMK 307 (443)
Q Consensus 289 SGGPlvd~~G~VVGI~s~~ 307 (443)
||+|++|.+|+|||+.-.+
T Consensus 135 SGSPIin~~G~vvGLYGNG 153 (185)
T 2fom_B 135 SGSPIVDKKGKVVGLYGNG 153 (185)
T ss_dssp TTCEEECTTSCEEEETTCE
T ss_pred CCCceEccCCcEEEEecce
Confidence 9999999999999986554
No 349
>2fyq_A Chymotrypsin-like cysteine proteinase; protease, norovirus, calicivirus, viral protein; 1.50A {Norwalk virus} PDB: 2fyr_A 2iph_A* 1wqs_A*
Probab=87.74 E-value=7 Score=33.26 Aligned_cols=144 Identities=18% Similarity=0.236 Sum_probs=73.9
Q ss_pred cEEEEEEEeCCCEEEeccccccCCCCCCCCCCceEEEEeCCCcEEEEEEEeecCCCCEEEEEEcCC--CCCCccccCCCC
Q 013444 155 GIGSGAIVDADGTILTCAHVVVDFHGSRALPKGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINSK--TPLPAAKLGTSS 232 (443)
Q Consensus 155 ~~GSGfiI~~~G~ILTaaHvv~~~~~~~~~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkl~~~--~~~~~~~l~~s~ 232 (443)
+.|=||.|+.. ..+|+-||+.... .++ | |.. -..+..+..-+++.+++..+ .++.-..|..
T Consensus 26 gsgwgfwVS~~-~fIT~tHV~p~~~-------~e~---f--G~p--~~~i~v~~~GEf~~~rfpk~~rpdvsgmiLEe-- 88 (194)
T 2fyq_A 26 GSGWGFWVSPT-VFITTTHVVPTGV-------KEF---F--GEP--LSSIAIHQAGEFTQFRFSKKMRPDLTGMVLEE-- 88 (194)
T ss_dssp TTEEEEESSSS-EEEEEGGGSCSSC-------SEE---T--TEE--GGGEEEEEETTEEEEEESSCSCTTSCCCEECS--
T ss_pred cCceeEEEccc-EEEEEeeecCCCC-------hhh---c--Cce--eeeEEEeecCcEEEEEcCCCcCCCCcceEEec--
Confidence 44779999988 9999999996532 111 0 111 11223344457888888754 3445555532
Q ss_pred CCCCCCEEEEEe-cCCCC--CCceEEEEEEeeecCccCCCCCCccceEEE-------EcccCCCCCccceeeecCC---C
Q 013444 233 KLCPGDWVVAMG-CPHSL--QNTVTAGIVSCVDRKSSDLGLGGMRREYLQ-------TDCAINAGNSGGPLVNIDG---E 299 (443)
Q Consensus 233 ~~~~G~~V~~iG-~p~~~--~~~~t~G~Vs~~~~~~~~~~~~~~~~~~i~-------~d~~i~~G~SGGPlvd~~G---~ 299 (443)
....|.-+.++= .+.+. ...+..|.+......-.- .++ ...++. .|-...||+-|.|-+-..| -
T Consensus 89 g~peGtV~silikR~sgellPlaVRmgt~as~kIqGk~--v~g-qtGmlltganaK~mdLGT~PGDCGcPYvykrgndwv 165 (194)
T 2fyq_A 89 GCPEGTVCSVLIKRDSGELLPLAVRMGAIASMRIQGRL--VHG-QSGMLLTGANAKGMDLGTIPGDCGAPYVHKRGNDWV 165 (194)
T ss_dssp SCCTTCEEEEEEECTTSCEEEEEEEEEEEEEEEETTEE--EEE-EEEEECC-----------CGGGTTCEEEEEETTEEE
T ss_pred CCCCCcEEEEEEecCCCCcceEEEEecceeeeEEeeeE--ecc-eeeeEEecCCcccCcCCCCCCCCCCceEEeeCCceE
Confidence 334477655443 23221 123444444333221100 000 011222 2344678999999986655 4
Q ss_pred EEEEEEEEeecCCCeEEEE
Q 013444 300 IVGINIMKVAAADGLSFAV 318 (443)
Q Consensus 300 VVGI~s~~~~~~~g~~~aI 318 (443)
|+||+..........-.++
T Consensus 166 v~GVH~AatrsgNtVica~ 184 (194)
T 2fyq_A 166 VCGVHAAATKSGNTVVCAV 184 (194)
T ss_dssp EEEEEEEECSSSSEEEEEC
T ss_pred EEEEEEeeccCCCEEEEEe
Confidence 8899988765544444443
No 350
>3su6_A NS3 protease, NS4A protein; drug resistance, drug design, protease inhibitors, serine PR viral protein, hydrolase-inhibitor complex; HET: SU3; 1.10A {Hepatitis c virus} PDB: 3su2_A* 3sv9_A* 3m5l_A* 3m5m_A* 3m5n_A 3m5o_A 3rc4_A 3rc5_A 3rc6_A 3su3_A* 3su4_A* 3sv6_A* 3sv7_A* 3su1_A* 3su5_A* 3sv8_A* 3su0_A* 2p59_A* 2qv1_A 1a1q_A ...
Probab=71.13 E-value=6.5 Score=34.36 Aligned_cols=42 Identities=29% Similarity=0.420 Sum_probs=28.7
Q ss_pred cCCCCCccceeeecCCCEEEEEEEEeecC--CCeEEEEeHHHHH
Q 013444 283 AINAGNSGGPLVNIDGEIVGINIMKVAAA--DGLSFAVPIDSAA 324 (443)
Q Consensus 283 ~i~~G~SGGPlvd~~G~VVGI~s~~~~~~--~g~~~aIPi~~i~ 324 (443)
....|.||||++-.+|.+|||-....-.. ...-.++|++.+.
T Consensus 154 S~lkGSSGgPvLC~~GHaVGmf~aav~trGvakai~fvPve~l~ 197 (203)
T 3su6_A 154 SYLKGSAGGPLLCPAGHAVGIFRTAVSTRGVAKAVDFIPVESLE 197 (203)
T ss_dssp GGTTTCTTCEEECTTSCEEEEEEEEEEETTEEEEEEEEEHHHHH
T ss_pred eeccCCCCCceecCCCCEEEEEEEEEEcCceeeeEEEEEccccc
Confidence 34679999999999999999975543221 1122347987654
No 351
>3dor_A Protein CT_858, CPAF; mature CPAF, dimer, transferase; 2.20A {Chlamydia trachomatis} PDB: 3dpm_A* 3dpn_A 3dja_A
Probab=59.39 E-value=16 Score=37.93 Aligned_cols=63 Identities=14% Similarity=0.211 Sum_probs=39.9
Q ss_pred ceEEeEECCCCccccCCCCCCCEEEEECCEeeCCHHHHH----------------HHH-------hcC-CCCeEEEEEEE
Q 013444 369 GVLVPVVTPGSPAHLAGFLPSDVVIKFDGKPVQSITEII----------------EIM-------GDR-VGEPLKVVVQR 424 (443)
Q Consensus 369 g~~V~~v~~~spA~~aGl~~GDiI~~vng~~V~s~~dl~----------------~~l-------~~~-~g~~v~l~v~R 424 (443)
-++|.++... .++++.||.|++|||+++..+-+-. +.| ... +-+.++|++.|
T Consensus 97 ~i~V~dv~~~----~s~I~vGdEIlsING~pv~e~Lek~~~~~Gsn~~a~~~~Al~~Lt~R~~~l~~~~p~~~~tlk~~~ 172 (583)
T 3dor_A 97 RFYFVDIMTF----SSEIRVGDELLEVDGAPVQDVLATLYGSNHKGTAAEESAALRTLFSRMASLGHKVPSGRTTLKIRR 172 (583)
T ss_dssp CEEEEEECSS----CCSSCTTCEEEEETTEEHHHHHHTTSCTTCCCCHHHHHHHHHHHTEEEGGGTCCCCCSEEEEEEEC
T ss_pred cEEEEecccc----ccCCCCCCEEEEECCccHHHHHHHHHHhcCCCcHHHHHHHHHHHhhhHHhhccCCCCCceEEEEEC
Confidence 3556555322 2269999999999999986553211 112 111 22378889888
Q ss_pred CCCeEEEEEEE
Q 013444 425 ANDQLVTLTVI 435 (443)
Q Consensus 425 ~~g~~~~l~v~ 435 (443)
.+|+..++.+.
T Consensus 173 ~~G~~~~v~~p 183 (583)
T 3dor_A 173 PFGTTREVRVK 183 (583)
T ss_dssp TTSCEEEEEEE
T ss_pred CCCcEEEEEee
Confidence 77887777664
No 352
>3s6n_G Small nuclear ribonucleoprotein G; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2y9b_G 2y9c_G 2y9d_G 3cw1_G 3pgw_G* 2y9a_G
Probab=56.13 E-value=19 Score=26.58 Aligned_cols=34 Identities=21% Similarity=0.313 Sum_probs=30.7
Q ss_pred CceEEEEeCCCcEEEEEEEeecCCCCEEEEEEcC
Q 013444 186 KGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINS 219 (443)
Q Consensus 186 ~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkl~~ 219 (443)
+..+.|.+.+|+.+.+++..+|...++.|=....
T Consensus 14 ~k~V~V~Lk~gr~~~G~L~~~D~~mNlvL~~~~e 47 (76)
T 3s6n_G 14 DKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVE 47 (76)
T ss_dssp CCEEEEEETTTEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CCeEEEEECCCcEEEEEEEEECCcceEEEeceEE
Confidence 4689999999999999999999999999887754
No 353
>1d3b_B Protein (small nuclear ribonucleoprotein associat B); snRNP, splicing, core snRNP domain, systemic lupus eryth SLE, RNA binding protein; HET: CIT; 2.00A {Homo sapiens} SCOP: b.38.1.1 PDB: 2y9a_A 2y9b_A 2y9c_A 2y9d_A
Probab=55.67 E-value=18 Score=27.65 Aligned_cols=34 Identities=29% Similarity=0.448 Sum_probs=30.4
Q ss_pred CceEEEEeCCCcEEEEEEEeecCCCCEEEEEEcC
Q 013444 186 KGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINS 219 (443)
Q Consensus 186 ~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkl~~ 219 (443)
...+.|.+.+|+.+.+++.++|...+|.|=....
T Consensus 14 ~k~V~V~l~~gr~~~G~L~~~D~~mNlvL~d~~E 47 (91)
T 1d3b_B 14 DYRMRCILQDGRIFIGTFKAFDKHMNLILCDCDE 47 (91)
T ss_dssp TSEEEEEETTCCEEEEEEEECCTTCCEEEEEEEE
T ss_pred CCcEEEEECCCeEEEEEEEEECCCCeEEecCEEE
Confidence 4689999999999999999999999999877653
No 354
>1h64_1 SnRNP SM-like protein; SM fold, spliceosome, snRNP core; 1.9A {Pyrococcus abyssi} SCOP: b.38.1.1 PDB: 1m8v_A*
Probab=54.97 E-value=24 Score=25.88 Aligned_cols=34 Identities=24% Similarity=0.443 Sum_probs=30.3
Q ss_pred CceEEEEeCCCcEEEEEEEeecCCCCEEEEEEcC
Q 013444 186 KGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINS 219 (443)
Q Consensus 186 ~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkl~~ 219 (443)
...+.|.+.+|+.+.+++..+|...++.|=....
T Consensus 14 ~~~V~V~l~~g~~~~G~L~~~D~~mNlvL~d~~e 47 (75)
T 1h64_1 14 DKDVLVILKKGFEFRGRLIGYDIHLNVVLADAEM 47 (75)
T ss_dssp TSEEEEEETTSEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CCEEEEEECCCCEEEEEEEEEeCCCCeEEeeEEE
Confidence 4689999999999999999999999999877653
No 355
>1i4k_A Putative snRNP SM-like protein; core snRNP domain, RNA binding protein; HET: CIT; 2.50A {Archaeoglobus fulgidus} SCOP: b.38.1.1 PDB: 1i5l_A*
Probab=54.27 E-value=22 Score=26.17 Aligned_cols=34 Identities=32% Similarity=0.549 Sum_probs=30.3
Q ss_pred CceEEEEeCCCcEEEEEEEeecCCCCEEEEEEcC
Q 013444 186 KGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINS 219 (443)
Q Consensus 186 ~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkl~~ 219 (443)
...+.|.+.+|+.+.+++..+|...++.|=....
T Consensus 14 ~~~V~V~L~~g~~~~G~L~~~D~~mNlvL~d~~e 47 (77)
T 1i4k_A 14 KSPVIVRLKGGREFRGTLDGYDIHMNLVLLDAEE 47 (77)
T ss_dssp TSEEEEEETTSCEEEEEEEEECTTCCEEEEEEEE
T ss_pred CCEEEEEEcCCCEEEEEEEEEcCCCCeEEeeEEE
Confidence 4689999999999999999999999999877653
No 356
>1th7_A SnRNP-2, small nuclear riboprotein protein; archaea, SM protein, SM fold, SS-SM1, RNA binding protein; 1.68A {Sulfolobus solfataricus} SCOP: b.38.1.1
Probab=53.26 E-value=22 Score=26.54 Aligned_cols=34 Identities=18% Similarity=0.284 Sum_probs=30.3
Q ss_pred CceEEEEeCCCcEEEEEEEeecCCCCEEEEEEcC
Q 013444 186 KGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINS 219 (443)
Q Consensus 186 ~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkl~~ 219 (443)
...+.|.+.+|+.+.+++..+|...++.|=....
T Consensus 19 ~~~V~V~l~~g~~~~G~L~~~D~~mNlvL~d~~e 52 (81)
T 1th7_A 19 NNLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEE 52 (81)
T ss_dssp TSEEEEEETTTEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CCeEEEEEcCCcEEEEEEEEEcCCCCEEEccEEE
Confidence 3589999999999999999999999999887754
No 357
>4emk_B U6 snRNA-associated SM-like protein LSM6; SM fold, mRNA decay and PRE-mRNA splicing, LSM proteins, RNA protein; 2.30A {Schizosaccharomyces pombe} PDB: 3swn_B
Probab=50.37 E-value=26 Score=25.74 Aligned_cols=33 Identities=21% Similarity=0.292 Sum_probs=29.6
Q ss_pred CceEEEEeCCCcEEEEEEEeecCCCCEEEEEEc
Q 013444 186 KGKVDVTLQDGRTFEGTVLNADFHSDIAIVKIN 218 (443)
Q Consensus 186 ~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkl~ 218 (443)
+..+.|.+.+|+.+.+++..+|...++.|=...
T Consensus 14 ~k~V~V~Lk~g~~~~G~L~~~D~~mNlvL~d~~ 46 (75)
T 4emk_B 14 GKKVLIRLSSGVDYKGILSCLDGYMNLALERTE 46 (75)
T ss_dssp TSEEEEECTTSCEEEEEEEEECTTCEEEEEEEE
T ss_pred CCeEEEEEcCCcEEEEEEEEEcCcceEEEccEE
Confidence 468999999999999999999999999887664
No 358
>1mgq_A SM-like protein; LSM, RNA-binding, archea, RNA binding protein; 1.70A {Methanothermobacterthermautotrophicus} SCOP: b.38.1.1 PDB: 1i81_A 1loj_A* 1jbm_A 1jri_A
Probab=50.34 E-value=26 Score=26.31 Aligned_cols=34 Identities=21% Similarity=0.431 Sum_probs=30.3
Q ss_pred CceEEEEeCCCcEEEEEEEeecCCCCEEEEEEcC
Q 013444 186 KGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINS 219 (443)
Q Consensus 186 ~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkl~~ 219 (443)
+..+.|.+.+|+.+.+++..+|...++.|=....
T Consensus 25 ~~~V~V~Lk~g~~~~G~L~~~D~~mNlvL~d~~e 58 (83)
T 1mgq_A 25 NSPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEE 58 (83)
T ss_dssp TSEEEEEETTTEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CCEEEEEEcCCcEEEEEEEEECCCceeEEccEEE
Confidence 4689999999999999999999999999877653
No 359
>1d3b_A Protein (small nuclear ribonucleoprotein SM D3); snRNP, splicing, core snRNP domain, systemic lupus eryth SLE, RNA binding protein; HET: CIT; 2.00A {Homo sapiens} SCOP: b.38.1.1
Probab=49.69 E-value=33 Score=25.24 Aligned_cols=34 Identities=15% Similarity=0.295 Sum_probs=30.3
Q ss_pred CceEEEEeCCCcEEEEEEEeecCCCCEEEEEEcC
Q 013444 186 KGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINS 219 (443)
Q Consensus 186 ~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkl~~ 219 (443)
...+.|.+.+|+.|.+++..+|...++.|-.+..
T Consensus 15 g~~V~VeLk~g~~~~G~L~~~D~~MNl~L~~~~e 48 (75)
T 1d3b_A 15 GHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITV 48 (75)
T ss_dssp TSEEEEEETTSCEEEEEEEEECTTCCEEEEEEEE
T ss_pred CCEEEEEECCCcEEEEEEEEEccceeEEEEeEEE
Confidence 4689999999999999999999999999887753
No 360
>4emk_A U6 snRNA-associated SM-like protein LSM5; SM fold, mRNA decay and PRE-mRNA splicing, LSM proteins, RNA protein; 2.30A {Schizosaccharomyces pombe} PDB: 3swn_A
Probab=49.64 E-value=29 Score=26.94 Aligned_cols=34 Identities=21% Similarity=0.341 Sum_probs=30.2
Q ss_pred CceEEEEeCCCcEEEEEEEeecCCCCEEEEEEcC
Q 013444 186 KGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINS 219 (443)
Q Consensus 186 ~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkl~~ 219 (443)
+..+.|.+.+|+.|.+++.++|...++.|=....
T Consensus 30 ~k~V~V~Lk~gr~~~G~L~gfD~~mNlvL~d~~E 63 (94)
T 4emk_A 30 GSNLWVIMKSEREFAGTLVGFDDYVNIVLKDVTE 63 (94)
T ss_dssp TSEEEEEESSSEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CCeEEEEECCCcEEEEEEEEEcccCCeEeeeEEE
Confidence 4689999999999999999999999999876653
No 361
>4hcz_A PHD finger protein 1; protein-peptide complex, tudor, histone binding, H3K36ME3, N nucleus, transcription; HET: M3L; 1.85A {Homo sapiens}
Probab=48.95 E-value=66 Score=22.55 Aligned_cols=35 Identities=20% Similarity=0.343 Sum_probs=31.6
Q ss_pred CceEEEEeCCCcEEEEEEEeecCCCCEEEEEEcCC
Q 013444 186 KGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINSK 220 (443)
Q Consensus 186 ~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkl~~~ 220 (443)
...+.++..||+-|.++++.++...+-+++++++.
T Consensus 7 GedVLarwsDG~fYlGtI~~V~~~~~~clV~F~D~ 41 (58)
T 4hcz_A 7 GQDVLARWTDGLLYLGTIKKVDSAREVCLVQFEDD 41 (58)
T ss_dssp TCEEEEECTTSCEEEEEEEEEETTTTEEEEEETTS
T ss_pred CCEEEEEecCCCEEeEEEEEEecCCCEEEEEEcCC
Confidence 46788999999999999999999999999999864
No 362
>3s6n_F Small nuclear ribonucleoprotein F; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2y9b_F 2y9c_F 2y9d_F 3cw1_F 3pgw_F* 2y9a_F
Probab=48.63 E-value=30 Score=26.26 Aligned_cols=33 Identities=18% Similarity=0.266 Sum_probs=29.8
Q ss_pred CceEEEEeCCCcEEEEEEEeecCCCCEEEEEEc
Q 013444 186 KGKVDVTLQDGRTFEGTVLNADFHSDIAIVKIN 218 (443)
Q Consensus 186 ~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkl~ 218 (443)
...+.|.+.+|+.|.+++..+|...++.|=.+.
T Consensus 16 ~k~V~V~Lk~g~~~~G~L~~~D~~mNlvL~d~~ 48 (86)
T 3s6n_F 16 GKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTE 48 (86)
T ss_dssp TSEEEEEETTSCEEEEEEEEECTTCCEEEEEEE
T ss_pred CCeEEEEEcCCeEEEEEEEEEcCceEEEEeeEE
Confidence 468999999999999999999999999987765
No 363
>4emg_A Probable U6 snRNA-associated SM-like protein LSM3; SM fold, mRNA decay, LSM proteins, RNA binding protein; 2.70A {Schizosaccharomyces pombe}
Probab=48.41 E-value=28 Score=26.86 Aligned_cols=34 Identities=21% Similarity=0.281 Sum_probs=30.4
Q ss_pred CceEEEEeCCCcEEEEEEEeecCCCCEEEEEEcC
Q 013444 186 KGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINS 219 (443)
Q Consensus 186 ~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkl~~ 219 (443)
...+.|.+.+|+.|.+++.++|.+.++.|=....
T Consensus 19 ~~~V~V~l~~gr~~~G~L~~~D~~mNlvL~d~~E 52 (93)
T 4emg_A 19 DEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEE 52 (93)
T ss_dssp TSEEEEEETTTEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CCEEEEEECCCcEEEEEEEEECCcccEEeecEEE
Confidence 4689999999999999999999999999877653
No 364
>4emk_C U6 snRNA-associated SM-like protein LSM7; SM fold, mRNA decay and PRE-mRNA splicing, LSM proteins, RNA protein; 2.30A {Schizosaccharomyces pombe} PDB: 3swn_C
Probab=47.98 E-value=28 Score=27.97 Aligned_cols=34 Identities=15% Similarity=0.349 Sum_probs=30.4
Q ss_pred CceEEEEeCCCcEEEEEEEeecCCCCEEEEEEcC
Q 013444 186 KGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINS 219 (443)
Q Consensus 186 ~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkl~~ 219 (443)
...+.|.+.+|+.+.+++.++|.+.+|.|=....
T Consensus 33 ~k~V~V~L~dGr~~~G~L~~fD~~mNLVL~d~~E 66 (113)
T 4emk_C 33 DQRIQATFTGGRQITGILKGFDQLMNLVLDDVEE 66 (113)
T ss_dssp CSEEEEEETTSCEEEEEEEEECTTCCEEEEEEEE
T ss_pred CCcEEEEEeCCeEEEEEEEEEcCcccEEEeeEEE
Confidence 4689999999999999999999999999877654
No 365
>1ljo_A Archaeal SM-like protein AF-SM2; snRNP, core snRNP domain, RNA binding protein, unknown F; 1.95A {Archaeoglobus fulgidus} SCOP: b.38.1.1
Probab=47.20 E-value=38 Score=24.90 Aligned_cols=34 Identities=9% Similarity=0.122 Sum_probs=30.2
Q ss_pred CceEEEEeCCC-cEEEEEEEeecCCCCEEEEEEcC
Q 013444 186 KGKVDVTLQDG-RTFEGTVLNADFHSDIAIVKINS 219 (443)
Q Consensus 186 ~~~i~V~~~dg-~~~~a~vv~~d~~~DlAlLkl~~ 219 (443)
...+.|.+.+| +.+.+++..+|...++.|=....
T Consensus 15 ~~~v~V~lk~g~~~~~G~L~~~D~~mNlvL~d~~e 49 (77)
T 1ljo_A 15 GKIIRVEMKGEENQLVGKLEGVDDYMNLYLTNAME 49 (77)
T ss_dssp TSEEEEEETTCSSEEEEEEEEECTTCCEEEEEEEE
T ss_pred CCEEEEEEeCCCEEEEEEEEEECCcceEEEeeEEE
Confidence 46899999999 99999999999999999877753
No 366
>2eqj_A Metal-response element-binding transcription factor 2; structure genomics,tudor domain, zinc-regulated factor 1, ZIRF1; NMR {Mus musculus}
Probab=47.02 E-value=69 Score=23.11 Aligned_cols=36 Identities=14% Similarity=0.201 Sum_probs=31.9
Q ss_pred CCceEEEEeCCCcEEEEEEEeecCCCCEEEEEEcCC
Q 013444 185 PKGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINSK 220 (443)
Q Consensus 185 ~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkl~~~ 220 (443)
....+..+..||.-|+|+|..++....-+++++.+.
T Consensus 16 vGddVLA~wtDGl~Y~gtI~~V~~~~gtC~V~F~D~ 51 (66)
T 2eqj_A 16 EGQDVLARWSDGLFYLGTIKKINILKQSCFIIFEDS 51 (66)
T ss_dssp TTCEEEEECTTSCEEEEEEEEEETTTTEEEEEETTT
T ss_pred CCCEEEEEEccCcEEEeEEEEEccCCcEEEEEEccC
Confidence 356788889999999999999999999999999854
No 367
>1y96_A Gemin6, SIP2, GEM-associated protein 6; SM fold, protein complex, RNA binding protein; 2.00A {Homo sapiens}
Probab=45.91 E-value=49 Score=25.28 Aligned_cols=33 Identities=27% Similarity=0.393 Sum_probs=28.9
Q ss_pred CceEEEEeCCCcEEEEEEEeecC-CCCEEEEEEc
Q 013444 186 KGKVDVTLQDGRTFEGTVLNADF-HSDIAIVKIN 218 (443)
Q Consensus 186 ~~~i~V~~~dg~~~~a~vv~~d~-~~DlAlLkl~ 218 (443)
..++.|.+.||+.|.+.+..+|| ...|.|+...
T Consensus 17 ~KeV~V~l~dg~~y~G~l~tvDp~s~sIvL~n~~ 50 (86)
T 1y96_A 17 YKEVRVTASEKNEYKGWVLTTDPVSANIVLVNFL 50 (86)
T ss_dssp TCEEEEEETTTEEEEEEEEEECTTTCCEEEEEEC
T ss_pred CCEEEEEEcCCCEEEEEEEEECCCceEEEEeecc
Confidence 46899999999999999999995 5688888773
No 368
>1i8f_A Putative snRNP SM-like protein; beta barrel-like SMAP monomers form 35-stranded beta-sheet I heptamer, structural genomics; 1.75A {Pyrobaculum aerophilum} SCOP: b.38.1.1 PDB: 1lnx_A*
Probab=45.75 E-value=26 Score=26.21 Aligned_cols=34 Identities=21% Similarity=0.310 Sum_probs=30.2
Q ss_pred CceEEEEeCCCcEEEEEEEeecCCCCEEEEEEcC
Q 013444 186 KGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINS 219 (443)
Q Consensus 186 ~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkl~~ 219 (443)
...+.|.+.+|+.+.+++..+|...++.|=....
T Consensus 21 ~~~V~V~l~~g~~~~G~L~~~D~~mNlvL~d~~e 54 (81)
T 1i8f_A 21 GKQVLVKLRDSHEIRGILRSFDQHVNLLLEDAEE 54 (81)
T ss_dssp TSEEEEEEGGGEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CCeEEEEEcCCcEEEEEEEEEcCCCeeEEccEEE
Confidence 4689999999999999999999999999877653
No 369
>3bw1_A SMX4 protein, U6 snRNA-associated SM-like protein LSM3; RNA-binding protein, SM protein, ring, HOMO octamer, mRNA processing; 2.50A {Saccharomyces cerevisiae}
Probab=44.96 E-value=27 Score=27.12 Aligned_cols=34 Identities=26% Similarity=0.394 Sum_probs=30.4
Q ss_pred CceEEEEeCCCcEEEEEEEeecCCCCEEEEEEcC
Q 013444 186 KGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINS 219 (443)
Q Consensus 186 ~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkl~~ 219 (443)
+..+.|.+.+|+.+.+++.++|...+|.|=....
T Consensus 20 ~k~V~V~Lk~gr~~~G~L~~fD~~mNlVL~d~~E 53 (96)
T 3bw1_A 20 DERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVE 53 (96)
T ss_dssp TSEEEEEEGGGCEEEEEEEEECTTCCEEEEEEEE
T ss_pred CCeEEEEECCCcEEEEEEEEECCCCcEEEcCEEE
Confidence 4689999999999999999999999999877653
No 370
>1b34_B Protein (small nuclear ribonucleoprotein SM D2); snRNP, splicing, spliceosome, core snRNP domain, systemi erythematosus, SLE, RNA binding protein; 2.50A {Homo sapiens} SCOP: b.38.1.1 PDB: 2y9a_C 2y9b_C 2y9c_C 2y9d_C 3cw1_C 3pgw_Y* 3s6n_B
Probab=43.77 E-value=35 Score=27.54 Aligned_cols=33 Identities=15% Similarity=0.318 Sum_probs=30.0
Q ss_pred ceEEEEeCCCcEEEEEEEeecCCCCEEEEEEcC
Q 013444 187 GKVDVTLQDGRTFEGTVLNADFHSDIAIVKINS 219 (443)
Q Consensus 187 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkl~~ 219 (443)
..+.|.+.+|+.+.+.+.++|.+.++.|=.+..
T Consensus 40 k~V~V~Lk~gr~~~G~L~~fD~~mNlvL~d~~E 72 (118)
T 1b34_B 40 TQVLINCRNNKKLLGRVKAFDRHCNMVLENVKE 72 (118)
T ss_dssp CEEEEEETTSCEEEEEEEEECTTCCEEEEEEEE
T ss_pred cEEEEEECCCcEEEEEEEEeCCceEEEEeCEEE
Confidence 589999999999999999999999999987764
No 371
>3pgw_B SM B; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 3cw1_A
Probab=43.09 E-value=25 Score=32.08 Aligned_cols=34 Identities=29% Similarity=0.448 Sum_probs=29.9
Q ss_pred CceEEEEeCCCcEEEEEEEeecCCCCEEEEEEcC
Q 013444 186 KGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINS 219 (443)
Q Consensus 186 ~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkl~~ 219 (443)
+.++.|.+.|+++|.+++..+|.+.||.|=..++
T Consensus 14 dKrV~V~LkdGRel~GtLkgFDq~MNLVL~Da~E 47 (231)
T 3pgw_B 14 DYRMRCILQDGRIFIGTFKAFDKHMNLILCDCDE 47 (231)
T ss_pred CCeEEEEECCCcEEEEEEEEEcccccEEecCEEE
Confidence 4689999999999999999999999998866553
No 372
>3by8_A Sensor protein DCUS; histidine kinase sensor domain, inner membrane, membrane, phosphoprotein, transferase, transmembrane; 1.45A {Escherichia coli} SCOP: d.110.6.1 PDB: 1ojg_A
Probab=41.96 E-value=25 Score=28.96 Aligned_cols=29 Identities=10% Similarity=0.340 Sum_probs=21.9
Q ss_pred ceeeecCCCEEEEEEEEeecCCCeEEEEeHHHHHHHHHH
Q 013444 291 GPLVNIDGEIVGINIMKVAAADGLSFAVPIDSAAKIIEQ 329 (443)
Q Consensus 291 GPlvd~~G~VVGI~s~~~~~~~g~~~aIPi~~i~~~l~~ 329 (443)
.|+.|.+|++||+++.+ ++.+.+...+..
T Consensus 111 ~PV~~~~g~viGvv~vg----------~~~~~~~~~~~~ 139 (142)
T 3by8_A 111 TPIYDENHKQIGVVAIG----------LELSRVTQQIND 139 (142)
T ss_dssp EEEECTTSCEEEEEEEE----------EEHHHHHHHHHC
T ss_pred EeEEcCCCCEEEEEEEe----------EEHHHHHHHHHH
Confidence 58988789999998754 667777766654
No 373
>4emh_A Probable U6 snRNA-associated SM-like protein LSM4; SM fold, mRNA decay, PRE-mRNA splicing, LSM proteins, RNA BI protein; 2.20A {Schizosaccharomyces pombe}
Probab=40.09 E-value=46 Score=26.35 Aligned_cols=33 Identities=24% Similarity=0.408 Sum_probs=29.9
Q ss_pred CceEEEEeCCCcEEEEEEEeecCCCCEEEEEEc
Q 013444 186 KGKVDVTLQDGRTFEGTVLNADFHSDIAIVKIN 218 (443)
Q Consensus 186 ~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkl~ 218 (443)
...+.|.+.+|+.|.+++..+|...++.|=.+.
T Consensus 26 gk~V~V~Lk~G~~~~G~L~~~D~~MNlvL~d~~ 58 (105)
T 4emh_A 26 GRPILVELKNGETFNGHLENCDNYMNLTLREVI 58 (105)
T ss_dssp CCEEEEEETTSCEEEEEEEEECTTCCEEEEEEE
T ss_pred CCEEEEEECCCCEEEEEEEEEcCCceEEEEEEE
Confidence 468999999999999999999999999987765
No 374
>1n9r_A SMF, small nuclear ribonucleoprotein F, snRNP-F, SM protein F; heptamer, translation; 2.80A {Saccharomyces cerevisiae} SCOP: b.38.1.1 PDB: 1n9s_A
Probab=38.97 E-value=45 Score=25.71 Aligned_cols=34 Identities=18% Similarity=0.329 Sum_probs=30.1
Q ss_pred CceEEEEeCCC-cEEEEEEEeecCCCCEEEEEEcC
Q 013444 186 KGKVDVTLQDG-RTFEGTVLNADFHSDIAIVKINS 219 (443)
Q Consensus 186 ~~~i~V~~~dg-~~~~a~vv~~d~~~DlAlLkl~~ 219 (443)
+..+.|.+.+| +.|.+++..+|...++.|=....
T Consensus 31 ~k~V~V~Lk~g~~~~~G~L~~~D~~MNlvL~d~~E 65 (93)
T 1n9r_A 31 NHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEE 65 (93)
T ss_dssp TSEEEEEESSTTEEEEEEEEECCTTTCEEEEEEEE
T ss_pred CCEEEEEEcCCCEEEEEEEEEEccccEEEEeeEEE
Confidence 46899999999 99999999999999999876653
No 375
>1b34_A Protein (small nuclear ribonucleoprotein SM D1); snRNP, splicing, spliceosome, core snRNP domain, systemi erythematosus, SLE, RNA binding protein; 2.50A {Homo sapiens} SCOP: b.38.1.1 PDB: 2y9a_B 2y9b_B 2y9c_B 2y9d_B 3cw1_B 3pgw_X* 3s6n_A
Probab=38.68 E-value=53 Score=26.51 Aligned_cols=61 Identities=16% Similarity=0.248 Sum_probs=41.2
Q ss_pred CceEEEEeCCCcEEEEEEEeecCCCCEEEEEEcCCC-CCCccccCCCCCCCCCCEEEEEecCCC
Q 013444 186 KGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINSKT-PLPAAKLGTSSKLCPGDWVVAMGCPHS 248 (443)
Q Consensus 186 ~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkl~~~~-~~~~~~l~~s~~~~~G~~V~~iG~p~~ 248 (443)
...+.|.+.+++.|.+++..+|...++.|=.+.... .-....++ .-+-.|+.|..+.-|..
T Consensus 12 gk~V~V~Lk~g~~~~G~L~~~D~~MNlvL~d~~e~~~~~~~~~lg--~v~IRG~nI~~I~~pd~ 73 (119)
T 1b34_A 12 HETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPVQLE--TLSIRGNNIRYFILPDS 73 (119)
T ss_dssp TCEEEEEETTCCEEEEEEEEECTTCCEEEEEEEEECTTSCCEEEE--EEEECGGGEEEEECCTT
T ss_pred CCEEEEEEcCCCEEEEEEEEEcccceEEeccEEEecCCCceeEcc--eEEEcCCeEEEEEeccc
Confidence 468999999999999999999999999987775321 11122221 12234666666666654
No 376
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=34.44 E-value=22 Score=29.88 Aligned_cols=21 Identities=29% Similarity=0.446 Sum_probs=18.4
Q ss_pred CCCccceeeecCCCEEEEEEE
Q 013444 286 AGNSGGPLVNIDGEIVGINIM 306 (443)
Q Consensus 286 ~G~SGGPlvd~~G~VVGI~s~ 306 (443)
.+.++-|++|.+|+++|+++.
T Consensus 47 ~~~~~~pVvd~~g~lvGiit~ 67 (170)
T 4esy_A 47 HQIGCAPVVDQNGHLVGIITE 67 (170)
T ss_dssp TTCSEEEEECTTSCEEEEEEG
T ss_pred cCCeEEEEEcCCccEEEEEEH
Confidence 577889999999999999874
No 377
>2m0o_A PHD finger protein 1; tudor domain, H3K36ME3 binding, peptide binding protein; HET: M3L; NMR {Homo sapiens}
Probab=34.27 E-value=52 Score=24.43 Aligned_cols=35 Identities=20% Similarity=0.343 Sum_probs=30.3
Q ss_pred CceEEEEeCCCcEEEEEEEeecCCCCEEEEEEcCC
Q 013444 186 KGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINSK 220 (443)
Q Consensus 186 ~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkl~~~ 220 (443)
..++.++..||.-|.++++.++...+-+++++++.
T Consensus 30 GeDVLarwsDGlfYLGTI~kV~~~~e~ClV~F~D~ 64 (79)
T 2m0o_A 30 GQDVLARWTDGLLYLGTIKKVDSAREVCLVQFEDD 64 (79)
T ss_dssp TCEEEBCCTTSCCCEEEEEEEETTTTEEEEEETTS
T ss_pred CCEEEEEecCCCEEeEEEEEeccCCCEEEEEEcCC
Confidence 35677778899999999999999999999999864
No 378
>2fwk_A U6 snRNA-associated SM-like protein LSM5; structural genomics, structural genomics consortium, SGC, DNA binding protein; 2.14A {Cryptosporidium parvum} SCOP: b.38.1.1 PDB: 3pgg_A
Probab=33.16 E-value=32 Score=27.98 Aligned_cols=32 Identities=13% Similarity=0.335 Sum_probs=28.4
Q ss_pred ceEEEEeCCCcEEEEEEEeecCCCCEEEEEEc
Q 013444 187 GKVDVTLQDGRTFEGTVLNADFHSDIAIVKIN 218 (443)
Q Consensus 187 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkl~ 218 (443)
..+.|.+.+|+.+.+++.++|.+.+|.|=.+.
T Consensus 39 k~V~V~Lk~Gr~~~G~L~~fD~~mNlVL~d~~ 70 (121)
T 2fwk_A 39 NRIYVVMKGDKEFSGVLRGFDEYVNMVLDDVQ 70 (121)
T ss_dssp SBCEEEETTTEEECCEEEEECTTCCEEEESCC
T ss_pred CeEEEEECCCcEEEEEEEEEcccCCeEeceEE
Confidence 57999999999999999999999999886553
No 379
>1m5q_A SMAP3, small nuclear ribonucleoprotein homolog, SM-like P; OB-like fold, B-sheet toroid, 14-MER, cadmium-binding site, translation; 2.00A {Pyrobaculum aerophilum} SCOP: b.38.1.1
Probab=31.36 E-value=79 Score=26.01 Aligned_cols=34 Identities=21% Similarity=0.437 Sum_probs=30.9
Q ss_pred CceEEEEeCCCcEEEEEEEeecCCCCEEEEEEcC
Q 013444 186 KGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINS 219 (443)
Q Consensus 186 ~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkl~~ 219 (443)
+..+.|.+.+|+.+.+++..+|...++.|=....
T Consensus 10 gk~V~V~Lk~G~~~~G~L~~~D~~MNlvL~d~~E 43 (130)
T 1m5q_A 10 GREVQVVLSNGEVYKGVLHAVDNQLNIVLANASN 43 (130)
T ss_dssp TSEEEEEETTSCEEEEEEEEECTTCCEEEEEEEC
T ss_pred CCeEEEEECCCcEEEEEEEEEcccceeEEeeEEE
Confidence 4689999999999999999999999999988764
No 380
>2y9a_D Small nuclear ribonucleoprotein SM D3; splicing-RNA complex, PRE-mRNA splicing, spliceosome, snRNP biogenesis, SM site, SM fold, heteromeric heptameric ring; 3.60A {Homo sapiens} PDB: 2y9b_D 2y9c_D 2y9d_D 3pgw_Z* 3cw1_D
Probab=29.75 E-value=1.1e+02 Score=24.86 Aligned_cols=33 Identities=15% Similarity=0.314 Sum_probs=30.2
Q ss_pred CceEEEEeCCCcEEEEEEEeecCCCCEEEEEEc
Q 013444 186 KGKVDVTLQDGRTFEGTVLNADFHSDIAIVKIN 218 (443)
Q Consensus 186 ~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkl~ 218 (443)
...+.|.+.+|+.|.+++..+|...++.|-.+.
T Consensus 15 gk~V~VeLknG~~~~G~L~~~D~~MNi~L~dv~ 47 (126)
T 2y9a_D 15 GHIVTCETNTGEVYRGKLIEAEDNMNCQMSNIT 47 (126)
T ss_dssp SCEEEEEESSCCEEEEEEEEECTTSCEEEEEEE
T ss_pred CCEEEEEECCCcEEEEEEEEEcCceEEEEeeEE
Confidence 468999999999999999999999999998775
No 381
>2e5p_A Protein PHF1, PHD finger protein 1; tudor domain, PHF1 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.49 E-value=1.6e+02 Score=21.22 Aligned_cols=35 Identities=20% Similarity=0.343 Sum_probs=31.5
Q ss_pred CceEEEEeCCCcEEEEEEEeecCCCCEEEEEEcCC
Q 013444 186 KGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINSK 220 (443)
Q Consensus 186 ~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkl~~~ 220 (443)
...+..+..||.-|.+++..++....-+++++++.
T Consensus 13 GqdVLarWsDGlfYlGtV~kV~~~~~~ClV~FeD~ 47 (68)
T 2e5p_A 13 GQDVLARWTDGLLYLGTIKKVDSAREVCLVQFEDD 47 (68)
T ss_dssp TCEEEEECTTSSEEEEEEEEEETTTTEEEEEETTT
T ss_pred CCEEEEEecCCcEEEeEEEEEecCCcEEEEEEccC
Confidence 46788889999999999999999999999999864
No 382
>2o8m_A Protease; NS3, NS4A, viral protein; 2.00A {Hepatitis c virus} PDB: 3lon_A* 2a4g_A* 2a4q_A* 2fm2_A* 2obo_A* 2obq_A 2a4r_A* 2oc1_A* 2oc7_A* 2oc8_A* 3eyd_A* 3kf2_A 3kn2_A* 3knx_A* 2oc0_A* 3lox_A* 2oin_A 1rtl_A* 1rgq_A* 2f9v_A* ...
Probab=27.84 E-value=1.1e+02 Score=26.99 Aligned_cols=42 Identities=26% Similarity=0.571 Sum_probs=28.8
Q ss_pred CCCCccceeeecCCCEEEEEEEEeecC---CCeEEEEeHHHHHHHH
Q 013444 285 NAGNSGGPLVNIDGEIVGINIMKVAAA---DGLSFAVPIDSAAKII 327 (443)
Q Consensus 285 ~~G~SGGPlvd~~G~VVGI~s~~~~~~---~g~~~aIPi~~i~~~l 327 (443)
..|.||+||+-..|++|||-....-.. ..+-| +|++.+..-.
T Consensus 146 ykGssgaPllCe~gh~vGly~~~VC~rG~ik~~~f-~p~e~~~~~~ 190 (200)
T 2o8m_A 146 LKGSAGGPLLCPAGHAVGLFRAAVCTRGVAKAVDF-IPVENLETTM 190 (200)
T ss_dssp TTTCTTCEEECTTSCEEEEEEEEEEETTEEEEEEE-EEHHHHHHHH
T ss_pred EeCCCCCceeccCCceeeEEEEEEecCCceeeeEe-eecccccccc
Confidence 578899999988899999865532211 12345 8988765543
No 383
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=27.03 E-value=36 Score=28.40 Aligned_cols=21 Identities=19% Similarity=0.170 Sum_probs=17.8
Q ss_pred CCCCccceeeecCCCEEEEEE
Q 013444 285 NAGNSGGPLVNIDGEIVGINI 305 (443)
Q Consensus 285 ~~G~SGGPlvd~~G~VVGI~s 305 (443)
..|.|+=|++|.+|+++|+.+
T Consensus 45 ~~~~s~~pVvd~~~~lvGiit 65 (156)
T 3k6e_A 45 QMTYTRVPVVTDEKQFVGTIG 65 (156)
T ss_dssp TSSSSEEEEECC-CBEEEEEE
T ss_pred HcCCcEEEEEcCCCcEEEEEE
Confidence 568899999999999999975
No 384
>4a4f_A SurviVal of motor neuron-related-splicing factor; RNA binding protein; HET: 2MR; NMR {Homo sapiens} PDB: 4a4h_A*
Probab=26.38 E-value=1.3e+02 Score=21.06 Aligned_cols=34 Identities=18% Similarity=0.292 Sum_probs=26.5
Q ss_pred CceEEEEe-CCCcEEEEEEEeecCCCCEEEEEEcC
Q 013444 186 KGKVDVTL-QDGRTFEGTVLNADFHSDIAIVKINS 219 (443)
Q Consensus 186 ~~~i~V~~-~dg~~~~a~vv~~d~~~DlAlLkl~~ 219 (443)
...+...+ .||+.|+|++...+...+.+.+.+.+
T Consensus 12 Gd~c~A~~s~Dg~wYrA~I~~v~~~~~~~~V~fvd 46 (64)
T 4a4f_A 12 GDKCMAVWSEDGQCYEAEIEEIDEENGTAAITFAG 46 (64)
T ss_dssp TCEEEEECTTTSSEEEEEEEEEETTTTEEEEEETT
T ss_pred CCEEEEEECCCCCEEEEEEEEEcCCCCEEEEEEEe
Confidence 35666777 48999999999999876777777764
No 385
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=25.87 E-value=34 Score=28.52 Aligned_cols=16 Identities=31% Similarity=0.447 Sum_probs=13.9
Q ss_pred ceeeecCCCEEEEEEE
Q 013444 291 GPLVNIDGEIVGINIM 306 (443)
Q Consensus 291 GPlvd~~G~VVGI~s~ 306 (443)
-|++|.+|+++||++.
T Consensus 118 lpVVd~~g~l~GiiT~ 133 (156)
T 3k6e_A 118 LPVVDAEGIFQGIITR 133 (156)
T ss_dssp EEEECTTSBEEEEEEH
T ss_pred eEEEecCCEEEEEEEH
Confidence 6899999999999763
No 386
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=25.82 E-value=48 Score=26.66 Aligned_cols=19 Identities=21% Similarity=0.550 Sum_probs=15.6
Q ss_pred ceeeecCCCEEEEEEEEee
Q 013444 291 GPLVNIDGEIVGINIMKVA 309 (443)
Q Consensus 291 GPlvd~~G~VVGI~s~~~~ 309 (443)
.|++|.+|++||+++.+..
T Consensus 106 ~PV~~~~g~viGvv~vg~~ 124 (131)
T 1p0z_A 106 SPIQDATGKVIGIVSVGYT 124 (131)
T ss_dssp EEEECTTCCEEEEEEEEEE
T ss_pred EeEECCCCCEEEEEEEEEE
Confidence 4899888999999987653
No 387
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=25.62 E-value=36 Score=26.76 Aligned_cols=20 Identities=10% Similarity=0.147 Sum_probs=15.8
Q ss_pred CCccceeeecCCCEEEEEEE
Q 013444 287 GNSGGPLVNIDGEIVGINIM 306 (443)
Q Consensus 287 G~SGGPlvd~~G~VVGI~s~ 306 (443)
+..--|++|.+|+++||++.
T Consensus 98 ~~~~lpVvd~~g~~~Giit~ 117 (127)
T 3nqr_A 98 RYHMAIVIDEFGGVSGLVTI 117 (127)
T ss_dssp TCCEEEEECTTSCEEEEEEH
T ss_pred CCeEEEEEeCCCCEEEEEEH
Confidence 33457899999999999864
No 388
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=24.54 E-value=39 Score=26.55 Aligned_cols=18 Identities=33% Similarity=0.370 Sum_probs=14.7
Q ss_pred ccceeeecCCCEEEEEEE
Q 013444 289 SGGPLVNIDGEIVGINIM 306 (443)
Q Consensus 289 SGGPlvd~~G~VVGI~s~ 306 (443)
..=|++|.+|+++|+.+.
T Consensus 100 ~~lpVvd~~g~~~Giit~ 117 (128)
T 3gby_A 100 SVVPLADEDGRYEGVVSR 117 (128)
T ss_dssp SEEEEECTTCBEEEEEEH
T ss_pred cEEEEECCCCCEEEEEEH
Confidence 346999999999999763
No 389
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=24.32 E-value=39 Score=27.02 Aligned_cols=19 Identities=16% Similarity=0.312 Sum_probs=15.4
Q ss_pred CccceeeecCCCEEEEEEE
Q 013444 288 NSGGPLVNIDGEIVGINIM 306 (443)
Q Consensus 288 ~SGGPlvd~~G~VVGI~s~ 306 (443)
..--|++|.+|+++||++.
T Consensus 100 ~~~~~Vvd~~g~lvGiit~ 118 (136)
T 3lfr_A 100 NHMAIVIDEYGGVAGLVTI 118 (136)
T ss_dssp CCEEEEECTTSCEEEEEEH
T ss_pred CeEEEEEeCCCCEEEEEEH
Confidence 3457899999999999864
No 390
>1z8r_A Coxsackievirus B4 polyprotein; beta barrel coordinated zinc ION, hydrolase; NMR {Human coxsackievirus B4}
Probab=24.21 E-value=97 Score=26.49 Aligned_cols=30 Identities=23% Similarity=0.389 Sum_probs=24.5
Q ss_pred EEEEcccCCCCCccceeeecCCCEEEEEEEE
Q 013444 277 YLQTDCAINAGNSGGPLVNIDGEIVGINIMK 307 (443)
Q Consensus 277 ~i~~d~~i~~G~SGGPlvd~~G~VVGI~s~~ 307 (443)
++....+..||+=||.|. .+.-||||++++
T Consensus 114 vl~~~G~~epGDCGG~L~-C~HGviGivTaG 143 (166)
T 1z8r_A 114 VLLATGFSEPGDAGGILR-CEHGVIGLVTMG 143 (166)
T ss_dssp EEEEECSSSCCCCBSEEE-CSSSEEEEEEEE
T ss_pred EEEEecCCCCCCCCceee-eCCCceEEEecC
Confidence 445566788999999998 678899999875
No 391
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=23.93 E-value=41 Score=26.73 Aligned_cols=18 Identities=28% Similarity=0.427 Sum_probs=14.8
Q ss_pred ccceeeecCCCEEEEEEE
Q 013444 289 SGGPLVNIDGEIVGINIM 306 (443)
Q Consensus 289 SGGPlvd~~G~VVGI~s~ 306 (443)
.--|++|.+|+++||.+.
T Consensus 101 ~~~~Vvd~~g~lvGiit~ 118 (130)
T 3hf7_A 101 KVGLVVDEYGDIQGLVTV 118 (130)
T ss_dssp CEEEEECTTSCEEEEEEH
T ss_pred eEEEEEcCCCCEEEEeeH
Confidence 457889999999999864
No 392
>2e5q_A PHD finger protein 19; tudor domain, isoform B, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.75 E-value=2e+02 Score=20.41 Aligned_cols=35 Identities=14% Similarity=0.179 Sum_probs=31.2
Q ss_pred CceEEEEeCCCcEEEEEEEeecCCCCEEEEEEcCC
Q 013444 186 KGKVDVTLQDGRTFEGTVLNADFHSDIAIVKINSK 220 (443)
Q Consensus 186 ~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkl~~~ 220 (443)
...+..+..||.-|.+++..++....-+++++++.
T Consensus 11 GqdVLarWsDGlfYlgtV~kV~~~~~~ClV~FeD~ 45 (63)
T 2e5q_A 11 GQYVLCRWTDGLYYLGKIKRVSSSKQSCLVTFEDN 45 (63)
T ss_dssp TCEEEEECTTSCEEEEEECCCCSTTSEEEEEETTS
T ss_pred CCEEEEEecCCCEEEEEEEEEecCCCEEEEEEccC
Confidence 46788889999999999999999989999999864
No 393
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=23.65 E-value=42 Score=26.53 Aligned_cols=20 Identities=15% Similarity=0.213 Sum_probs=15.5
Q ss_pred CCccceeeecCCCEEEEEEE
Q 013444 287 GNSGGPLVNIDGEIVGINIM 306 (443)
Q Consensus 287 G~SGGPlvd~~G~VVGI~s~ 306 (443)
+..--|++|.+|+++||++.
T Consensus 101 ~~~~~~Vvd~~g~~vGivt~ 120 (130)
T 3i8n_A 101 RLQLALVVDEYGTVLGLVTL 120 (130)
T ss_dssp TCCEEEEECTTSCEEEEEEH
T ss_pred CCeEEEEEcCCCCEEEEEEH
Confidence 33456889999999999863
No 394
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=23.35 E-value=42 Score=26.54 Aligned_cols=20 Identities=25% Similarity=0.345 Sum_probs=14.7
Q ss_pred CCccceeeecCCCEEEEEEE
Q 013444 287 GNSGGPLVNIDGEIVGINIM 306 (443)
Q Consensus 287 G~SGGPlvd~~G~VVGI~s~ 306 (443)
+..--|++|.+|+++||++.
T Consensus 98 ~~~~~pVvd~~g~~~Giit~ 117 (129)
T 3jtf_A 98 RNHLAIVIDEHGGISGLVTM 117 (129)
T ss_dssp SCCEEEEECC-CCEEEEEEH
T ss_pred CCeEEEEEeCCCCEEEEEEH
Confidence 33457899988999999863
No 395
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=21.75 E-value=49 Score=25.51 Aligned_cols=20 Identities=35% Similarity=0.398 Sum_probs=15.6
Q ss_pred CCccceeeecCCCEEEEEEE
Q 013444 287 GNSGGPLVNIDGEIVGINIM 306 (443)
Q Consensus 287 G~SGGPlvd~~G~VVGI~s~ 306 (443)
+.+--|++|.+|+++|+.+.
T Consensus 92 ~~~~l~Vvd~~g~~~Givt~ 111 (122)
T 3kpb_A 92 NISGVPVVDDYRRVVGIVTS 111 (122)
T ss_dssp TCSEEEEECTTCBEEEEEEH
T ss_pred CCCeEEEECCCCCEEEEEeH
Confidence 34456899988999999763
No 396
>2hrv_A 2A cysteine proteinase; hydrolase (cysteine proteinase); 1.95A {Human rhinovirus 2} SCOP: b.47.1.4
Probab=21.44 E-value=1.9e+02 Score=24.15 Aligned_cols=30 Identities=23% Similarity=0.432 Sum_probs=24.4
Q ss_pred EEEEcccCCCCCccceeeecCCCEEEEEEEE
Q 013444 277 YLQTDCAINAGNSGGPLVNIDGEIVGINIMK 307 (443)
Q Consensus 277 ~i~~d~~i~~G~SGGPlvd~~G~VVGI~s~~ 307 (443)
++....+..||+=||.|. ...-||||++++
T Consensus 94 ~l~g~G~~epGDCGG~L~-C~HGviGivTaG 123 (142)
T 2hrv_A 94 LLIGEGPCEPGDCGGKLL-CKHGVIGIVTAG 123 (142)
T ss_dssp EEEEECCCCTTCTTCEEE-ETTEEEEEEEEE
T ss_pred EEEEEcCCCCCCCCceee-eCCCceEEEecC
Confidence 445566789999999998 577899999875
No 397
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=21.30 E-value=49 Score=26.74 Aligned_cols=20 Identities=15% Similarity=0.087 Sum_probs=15.6
Q ss_pred CCccceeeecCCCEEEEEEE
Q 013444 287 GNSGGPLVNIDGEIVGINIM 306 (443)
Q Consensus 287 G~SGGPlvd~~G~VVGI~s~ 306 (443)
+..--|++|.+|+++||++.
T Consensus 117 ~~~~l~Vvd~~g~~~Giit~ 136 (148)
T 3lv9_A 117 KLQLAIVVDEYGGTSGVVTI 136 (148)
T ss_dssp TCSEEEEECTTSSEEEEEEH
T ss_pred CCeEEEEEeCCCCEEEEEEH
Confidence 33456999999999999863
No 398
>3s6n_E Small nuclear ribonucleoprotein E; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2y9b_E 2y9c_E 2y9d_E 3cw1_E 3pgw_E* 2y9a_E
Probab=21.02 E-value=1.1e+02 Score=23.34 Aligned_cols=32 Identities=13% Similarity=0.234 Sum_probs=26.5
Q ss_pred eEEEEe----CCCcEEEEEEEeecCCCCEEEEEEcC
Q 013444 188 KVDVTL----QDGRTFEGTVLNADFHSDIAIVKINS 219 (443)
Q Consensus 188 ~i~V~~----~dg~~~~a~vv~~d~~~DlAlLkl~~ 219 (443)
.+.|.+ .+|+.+.+++.++|...++.|=...+
T Consensus 28 ~v~V~l~~~~~~gr~~~G~L~gfD~~mNlvL~d~~E 63 (92)
T 3s6n_E 28 RSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEE 63 (92)
T ss_dssp TCEEEEEESSSCSSEEEEEEEEECTTCCEEEEEEEE
T ss_pred CEEEEEEEEecCCEEEEEEEEEEcCcCcEEEeeeEE
Confidence 345555 89999999999999999999887754
No 399
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=20.98 E-value=50 Score=27.16 Aligned_cols=20 Identities=15% Similarity=0.185 Sum_probs=15.8
Q ss_pred CCccceeeecCCCEEEEEEE
Q 013444 287 GNSGGPLVNIDGEIVGINIM 306 (443)
Q Consensus 287 G~SGGPlvd~~G~VVGI~s~ 306 (443)
+..--|++|.+|+++||++.
T Consensus 132 ~~~~~~Vvd~~g~~~Givt~ 151 (156)
T 3oi8_A 132 RNHMAIVIDEYGGTSGLVTF 151 (156)
T ss_dssp TCCEEEEECTTSSEEEEEEH
T ss_pred CCeEEEEECCCCCEEEEEEH
Confidence 33456899999999999864
No 400
>4dah_A Sporulation kinase D; alpha-beta-alpha structure, structural genomics, midwest CEN structural genomics (MCSG), PSI-biology, PAS-like fold; 2.03A {Bacillus subtilis} PDB: 4dbj_A 4dbi_A 4dak_A 3fos_A
Probab=20.87 E-value=1.1e+02 Score=26.28 Aligned_cols=31 Identities=16% Similarity=0.325 Sum_probs=25.1
Q ss_pred ceeeecCCCEEEEEEEEeecCCCeEEEEeHHHHHHHHHHHH
Q 013444 291 GPLVNIDGEIVGINIMKVAAADGLSFAVPIDSAAKIIEQFK 331 (443)
Q Consensus 291 GPlvd~~G~VVGI~s~~~~~~~g~~~aIPi~~i~~~l~~l~ 331 (443)
-|+.+.+|+++|+... .++.+.+.+++..++
T Consensus 130 ~pi~~~~g~~~Gvl~~----------~i~l~~l~~~~~~~~ 160 (217)
T 4dah_A 130 VPVLDSKRNVTDYLVA----------AIQIDYLKNLINLLS 160 (217)
T ss_dssp EEEECTTSCEEEEEEE----------EEEHHHHHHHHHHHC
T ss_pred EEEECCCCCEEEEEEE----------EEcHHHHHHHHHhcC
Confidence 4788888999999864 488888988888774
No 401
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=20.12 E-value=53 Score=26.47 Aligned_cols=16 Identities=38% Similarity=0.183 Sum_probs=13.7
Q ss_pred ceeeecCCCEEEEEEE
Q 013444 291 GPLVNIDGEIVGINIM 306 (443)
Q Consensus 291 GPlvd~~G~VVGI~s~ 306 (443)
-|++|.+|+++||++.
T Consensus 119 l~Vvd~~g~~~Giit~ 134 (150)
T 3lqn_A 119 ICAVNEDGYFEGILTR 134 (150)
T ss_dssp EEEECTTCBEEEEEEH
T ss_pred EEEECCCCcEEEEEEH
Confidence 6899989999999753
Done!