Query 013445
Match_columns 443
No_of_seqs 214 out of 375
Neff 4.5
Searched_HMMs 13730
Date Mon Mar 25 10:43:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013445.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/013445hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2fxta1 d.17.4.13 (A:234-425) 100.0 2.2E-32 1.6E-36 253.2 11.5 149 285-435 3-163 (192)
2 d2cw9a1 d.17.4.13 (A:270-451) 99.9 7.8E-24 5.7E-28 193.3 10.4 134 299-434 11-149 (182)
3 d1gs9a_ a.24.1.1 (A:) Apolipop 58.1 28 0.002 27.9 9.4 18 119-136 122-139 (144)
4 d2rcda1 d.17.4.18 (A:1-127) Un 38.4 10 0.00074 28.8 3.2 34 331-364 8-41 (127)
5 d1x9fb_ a.1.1.2 (B:) Extracell 35.4 70 0.0051 25.1 8.2 73 298-374 68-142 (145)
6 d1asha_ a.1.1.2 (A:) Ascaris h 34.7 64 0.0046 25.6 7.9 74 298-374 69-146 (147)
7 d3dmca1 d.17.4.10 (A:1-133) Un 34.6 4.6 0.00034 31.6 0.5 31 335-365 10-40 (133)
8 d2k54a1 d.17.4.29 (A:1-123) Un 28.1 8.7 0.00063 29.5 1.1 27 339-365 6-32 (123)
9 d1gs9a_ a.24.1.1 (A:) Apolipop 26.8 62 0.0045 25.7 6.4 38 64-102 41-83 (144)
10 d1j1va_ a.4.12.2 (A:) Chromoso 26.7 30 0.0022 26.1 4.1 35 42-76 57-91 (94)
11 d1q1fa_ a.1.1.2 (A:) Neuroglob 24.8 1E+02 0.0074 23.7 7.3 74 298-374 66-143 (148)
12 d3en8a1 d.17.4.20 (A:1-127) Un 23.7 11 0.00081 29.1 0.9 28 338-365 6-33 (127)
13 d2geya1 d.17.4.9 (A:2-145) Put 23.2 11 0.00079 29.6 0.8 22 343-364 10-31 (144)
14 d2f86b1 d.17.4.7 (B:343-471) A 22.6 17 0.0012 26.6 1.8 28 338-365 11-38 (129)
15 d2ux0a1 d.17.4.7 (A:387-521) A 20.6 20 0.0014 26.6 1.8 28 337-364 12-39 (135)
No 1
>d2fxta1 d.17.4.13 (A:234-425) Translocase of inner mitochondrial membrane TIMM44 (TIM44), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.97 E-value=2.2e-32 Score=253.24 Aligned_cols=149 Identities=21% Similarity=0.404 Sum_probs=132.1
Q ss_pred HHhhhh-hcccccchhhhhhhccc---cccCcchHHHHHHHHHHhCCCCChhhHHHHHHHHHHH-HHHHHHhCCHHHHhh
Q 013445 285 EDVRER-WETSDNPIVHKIQDMNE---TIFQETDAAASIKEIRRRDPSFSLPDFVSEVQEAIRP-VLSAYMKGDVETLKK 359 (443)
Q Consensus 285 ed~r~~-~EeSDNPlV~ki~dI~d---~lf~eTe~a~vL~eIk~~DPsFd~~~Fl~gar~ai~p-ILeAf~kGD~e~LK~ 359 (443)
+|||++ |||||||+|...++|+| ++|++|+++++|++|+++||+||+++|+.||+.+|+| ||+||++||+++||+
T Consensus 3 ~~~~~~~~~~sdnp~v~~~r~i~d~~~~~f~ete~~~~l~~ik~~Dp~F~~~~Fl~gak~~~~p~Il~Af~~GD~~~Lk~ 82 (192)
T d2fxta1 3 QSLKNKLWDESENPLIVVMRKITNKVGGFFAETESSRVYSQFKLMDPTFSNESFTRHLREYIVPEILEAYVKGDVKVLKK 82 (192)
T ss_dssp HHHHHHHHTCCSSHHHHHHHHHHTTTTCCBCCCCSHHHHHHHHHHCTTCCHHHHHHHHHHTHHHHHHHHHHTTCHHHHHH
T ss_pred hHhcccccccCCCcceeeeeeeccccccccccCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 489998 99999999977777776 6999999999999999999999999999999999997 999999999999999
Q ss_pred hcCHHHHHHHHHHHHHHHHCCCeecceeeecccccchhh------hhheehhhccCccceeeeec-ccchhhhhhhcccc
Q 013445 360 YCSPEVIERCKAEHTAYQSHGIFFDNRVNEFVKFYHFLF------VCFFFFFWLSSSDCHFISIH-LGTLGVCKSLLLHI 432 (443)
Q Consensus 360 wcseavyn~faa~I~~R~~~Gl~~DskILdI~~i~~~~~------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 432 (443)
||++++|+.|+++|++|+++|++++.+||+|.+++-+.+ -.-.+++-|..++++|+++. .|. |+.|..++|
T Consensus 83 lls~~vy~~f~~~I~~r~~~g~~~~~~ii~I~~~~I~~a~~~~~~~~~~itV~F~t~qi~~~~d~k~G~--IieGd~d~i 160 (192)
T d2fxta1 83 WFSEAPFNVYAAQQKIFKEQDVYADGRILDIRGVEIVSAKLLAPQDIPVLVVGCRAQEINLYRKKKTGE--IAAGDEANI 160 (192)
T ss_dssp HBCHHHHHHHHHHHHHHHHTTEECCEEECCCEEEEEEEEEEETTTTEEEEEEEEEECEEECCEETTTBT--TSSCSCCCC
T ss_pred HhhHHHHHHHHHHHHHHHHcCCeeeEEEeccceeEEEEEEEecCCCeEEEEEEEEEEEEEEEEecCCCc--EecCCCCcc
Confidence 999999999999999999999999999999977654321 11224556788899999985 799 999999988
Q ss_pred ccC
Q 013445 433 QPS 435 (443)
Q Consensus 433 ~~~ 435 (443)
+..
T Consensus 161 ~~v 163 (192)
T d2fxta1 161 LMS 163 (192)
T ss_dssp CCE
T ss_pred EEE
Confidence 753
No 2
>d2cw9a1 d.17.4.13 (A:270-451) Translocase of inner mitochondrial membrane TIMM44 (TIM44), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89 E-value=7.8e-24 Score=193.28 Aligned_cols=134 Identities=18% Similarity=0.280 Sum_probs=119.0
Q ss_pred hhhhhhccccccCcchHHHHHHHHHHhCCCCChhhHHHHHHH-HHHHHHHHHHhCCHHHHhhhcCHHHHHHHHHHHHHHH
Q 013445 299 VHKIQDMNETIFQETDAAASIKEIRRRDPSFSLPDFVSEVQE-AIRPVLSAYMKGDVETLKKYCSPEVIERCKAEHTAYQ 377 (443)
Q Consensus 299 V~ki~dI~d~lf~eTe~a~vL~eIk~~DPsFd~~~Fl~gar~-ai~pILeAf~kGD~e~LK~wcseavyn~faa~I~~R~ 377 (443)
+++++++++++|++++.+.+|++|+++||+||+++|+.||+. +|++|++||++||++.|++||++++|+.|.+.|++|+
T Consensus 11 ~~~v~~~~~~~~~~~~~~~~l~~i~~~Dp~F~~~~Fl~gAk~~~~~~i~~A~~~gD~~~L~~llt~~~~~~f~~~i~~r~ 90 (182)
T d2cw9a1 11 TDKVTDLLGGLFSKTEMSEVLTEILRVDPAFDKDRFLKQCENDIIPNVLEAMISGELDILKDWCYEATYSQLAHPIQQAK 90 (182)
T ss_dssp HHHHHHHTCCTTHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTHHHHHHHHHHHTCHHHHHHHBCHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhcCCCCCCHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 388999999999999999999999999999999999999986 7888999999999999999999999999999999999
Q ss_pred HCCCeecceeeecccccchhh----hhheehhhccCccceeeeecccchhhhhhhcccccc
Q 013445 378 SHGIFFDNRVNEFVKFYHFLF----VCFFFFFWLSSSDCHFISIHLGTLGVCKSLLLHIQP 434 (443)
Q Consensus 378 ~~Gl~~DskILdI~~i~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (443)
.+|++.+.++|+|.+++-..+ -...+++-|..++++|+++.-|. |++|..+.|+.
T Consensus 91 ~~g~~~~~~~i~i~~~ei~~a~~~~~~~~itV~F~~~qi~~~~D~~G~--iveG~~d~i~~ 149 (182)
T d2cw9a1 91 ALGLQFHSRILDIDNVDLAMGKMVEQGPVLIITFQAQLVMVVRNPKGE--VVEGDPDKVLR 149 (182)
T ss_dssp HTTCEECCEEEEEEEEEEEEEEEETTEEEEEEEEEEEEECEEECTTSC--EEEECTTCCEE
T ss_pred HCCCeeeeeecccccceeEEEEeeCCceEEEEEEEEEehhheecCCCC--EecCCCCCceE
Confidence 999999999999966543221 23345555677888899999999 99999888765
No 3
>d1gs9a_ a.24.1.1 (A:) Apolipoprotein E {Human (Homo sapiens), E4 [TaxId: 9606]}
Probab=58.15 E-value=28 Score=27.90 Aligned_cols=18 Identities=0% Similarity=0.348 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHhhhhhhc
Q 013445 119 SMKEKISAATEEVKGTFR 136 (443)
Q Consensus 119 ~~k~ki~~a~e~vk~t~~ 136 (443)
.++.++..-++.++..+.
T Consensus 122 el~~~l~~~~eel~~kL~ 139 (144)
T d1gs9a_ 122 KLRKRLLRDADDLQKRLA 139 (144)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 445566666666665544
No 4
>d2rcda1 d.17.4.18 (A:1-127) Uncharacterized protein ECA3500 {Pectobacterium atrosepticum [TaxId: 29471]}
Probab=38.44 E-value=10 Score=28.84 Aligned_cols=34 Identities=21% Similarity=0.216 Sum_probs=27.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHhCCHHHHhhhcCHH
Q 013445 331 LPDFVSEVQEAIRPVLSAYMKGDVETLKKYCSPE 364 (443)
Q Consensus 331 ~~~Fl~gar~ai~pILeAf~kGD~e~LK~wcsea 364 (443)
..+...+++.++.-..+||..||.+.|..+.+++
T Consensus 8 ~~~~~aeI~a~~~~~~~A~~~~D~~~l~~l~a~D 41 (127)
T d2rcda1 8 QADVLADVTAAFYRYEKALTGNDVAVLDELFWHD 41 (127)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCHHHHHHHBCCS
T ss_pred ChhHHHHHHHHHHHHHHHHHcCCHHHHHHhhcCC
Confidence 4455666677777788999999999999998766
No 5
>d1x9fb_ a.1.1.2 (B:) Extracellular dodecameric hemoglobin (erythrocruorin), subunit II (globin B) {Common earthworm (Lumbricus terrestris) [TaxId: 6398]}
Probab=35.38 E-value=70 Score=25.09 Aligned_cols=73 Identities=12% Similarity=0.144 Sum_probs=41.3
Q ss_pred hhhhhhhccccccCcchHHHHHHHHHHh--CCCCChhhHHHHHHHHHHHHHHHHHhCCHHHHhhhcCHHHHHHHHHHHH
Q 013445 298 IVHKIQDMNETIFQETDAAASIKEIRRR--DPSFSLPDFVSEVQEAIRPVLSAYMKGDVETLKKYCSPEVIERCKAEHT 374 (443)
Q Consensus 298 lV~ki~dI~d~lf~eTe~a~vL~eIk~~--DPsFd~~~Fl~gar~ai~pILeAf~kGD~e~LK~wcseavyn~faa~I~ 374 (443)
++..+..+++++.....+...|+.+-+. ....+++.|-. +.+++.-+|...+ ||--+...| ..+|+.+.+.|+
T Consensus 68 v~~~l~~~I~~Ldd~~~l~~~L~~lg~~H~~~gv~~~~f~~-~~~~l~~~l~~~l-g~~~~~~AW--~~~~~~i~~~ik 142 (145)
T d1x9fb_ 68 VLGGLDIAISTLDQPATLKEELDHLQVQHEGRKIPDNYFDA-FKTAILHVVAAQL-GRCYDREAW--DACIDHIEDGIK 142 (145)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTSCCCHHHHHH-HHHHHHHHHHHHH-TTSCCHHHH--HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHhhcccccCCCHHHHHH-HHHHHHHHHHHHc-CCcCCHHHH--HHHHHHHHHHHh
Confidence 3355666777776666677788888775 45678888844 5555555444433 321112233 344555555443
No 6
>d1asha_ a.1.1.2 (A:) Ascaris hemoglobin, domain 1 {Pig roundworm (Ascaris suum) [TaxId: 6253]}
Probab=34.66 E-value=64 Score=25.62 Aligned_cols=74 Identities=14% Similarity=0.073 Sum_probs=51.2
Q ss_pred hhhhhhhccccccCcchHHHHHHHHHHh----CCCCChhhHHHHHHHHHHHHHHHHHhCCHHHHhhhcCHHHHHHHHHHH
Q 013445 298 IVHKIQDMNETIFQETDAAASIKEIRRR----DPSFSLPDFVSEVQEAIRPVLSAYMKGDVETLKKYCSPEVIERCKAEH 373 (443)
Q Consensus 298 lV~ki~dI~d~lf~eTe~a~vL~eIk~~----DPsFd~~~Fl~gar~ai~pILeAf~kGD~e~LK~wcseavyn~faa~I 373 (443)
++..+..+++++.....+...|..|-+. .++.++..| ..+..++..+|.....-|-++...| ..+|+.|+..|
T Consensus 69 v~~~l~~~V~~Ldd~~~l~~~l~~Lg~~H~~r~v~v~~~~f-~~~~~~l~~~l~~~~g~~~~~~~AW--~~l~~~~~~~~ 145 (147)
T d1asha_ 69 ILLACHVLCATYDDRETFNAYTRELLDRHARDHVHMPPEVW-TDFWKLFEEYLGKKTTLDEPTKQAW--HEIGREFAKEI 145 (147)
T ss_dssp HHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHTTCCCCHHHH-HHHHHHHHHHHHHHSCCCHHHHHHH--HHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHhcccccCCCHHHH-HHHHHHHHHHHHhhcCCCHHHHHHH--HHHHHHHHHHH
Confidence 4466677777886666677777777665 456677777 5555666666666554588888888 46888888776
Q ss_pred H
Q 013445 374 T 374 (443)
Q Consensus 374 ~ 374 (443)
.
T Consensus 146 ~ 146 (147)
T d1asha_ 146 N 146 (147)
T ss_dssp T
T ss_pred c
Confidence 4
No 7
>d3dmca1 d.17.4.10 (A:1-133) Uncharacterized protein Ava2261 {Anabaena variabilis [TaxId: 1172]}
Probab=34.55 E-value=4.6 Score=31.61 Aligned_cols=31 Identities=3% Similarity=0.120 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHHHHhCCHHHHhhhcCHHH
Q 013445 335 VSEVQEAIRPVLSAYMKGDVETLKKYCSPEV 365 (443)
Q Consensus 335 l~gar~ai~pILeAf~kGD~e~LK~wcseav 365 (443)
++-+++.|+-.++|+..||.+.+..+|++++
T Consensus 10 ~~~a~~~~e~f~~a~~~gD~d~~~~l~~~D~ 40 (133)
T d3dmca1 10 LKVAHQGFEFFTQGLATGEWQKFLDMLTEDF 40 (133)
T ss_dssp HHHHHHHHHHHHHHHHHSCCHHHHTTEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHhccce
Confidence 3456777777889999999999999988764
No 8
>d2k54a1 d.17.4.29 (A:1-123) Uncharacterized protein Atu0742 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=28.07 E-value=8.7 Score=29.47 Aligned_cols=27 Identities=15% Similarity=0.372 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHhCCHHHHhhhcCHHH
Q 013445 339 QEAIRPVLSAYMKGDVETLKKYCSPEV 365 (443)
Q Consensus 339 r~ai~pILeAf~kGD~e~LK~wcseav 365 (443)
+..+.--++||.+||++.+-.++++++
T Consensus 6 ~~~V~~~~~A~~~~D~e~~~~~~aeD~ 32 (123)
T d2k54a1 6 ELPVQKQLEAYNARDIDAFMAWWADDC 32 (123)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHTEEEEE
T ss_pred HHHHHHHHHHHhCCCHHHHHHhcCCCe
Confidence 344445789999999999999999885
No 9
>d1gs9a_ a.24.1.1 (A:) Apolipoprotein E {Human (Homo sapiens), E4 [TaxId: 9606]}
Probab=26.82 E-value=62 Score=25.67 Aligned_cols=38 Identities=21% Similarity=0.287 Sum_probs=18.3
Q ss_pred hhhHHHHHHHHHHHHHHh-----hhHHHHHHhhHHHHHHHHHhh
Q 013445 64 PEFKHSVKELKKKAEEIK-----GVKEELKERTKQTTEQLYKQV 102 (443)
Q Consensus 64 kElqeniK~l~eea~kL~-----~s~e~lK~r~k~~a~~~~K~V 102 (443)
+.+++++.++..-++.|. -+ +.++.++.+.++.+...+
T Consensus 41 ~~l~e~~~~l~~~~~~l~~~l~p~~-~e~~~~l~~~~e~lr~~l 83 (144)
T d1gs9a_ 41 ALMDETMKELKAYKSELEEQLTPVA-EETRARLSKELQAAQARL 83 (144)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCCCCC-SHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhHHHHHHHH
Confidence 445555555555555552 11 134444555555555544
No 10
>d1j1va_ a.4.12.2 (A:) Chromosomal replication initiation factor DnaA C-terminal domain IV {Escherichia coli [TaxId: 562]}
Probab=26.74 E-value=30 Score=26.10 Aligned_cols=35 Identities=17% Similarity=0.267 Sum_probs=28.9
Q ss_pred CCCCcccHHHHHHHHHHHhhhChhhHHHHHHHHHH
Q 013445 42 SNRQFSVFKEFSKKIKGEAESNPEFKHSVKELKKK 76 (443)
Q Consensus 42 ~~Rr~sff~~f~d~iK~E~~KNkElqeniK~l~ee 76 (443)
++|..+-..-=+++++++++.|++|++.|.++.+.
T Consensus 57 g~rdHsTV~~a~kki~~~~~~d~~~~~~i~~i~~~ 91 (94)
T d1j1va_ 57 GGRDHTTVLHACRKIEQLREESHDIKEDFSNLIRT 91 (94)
T ss_dssp TSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred CCCCchHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 44666666667789999999999999999998876
No 11
>d1q1fa_ a.1.1.2 (A:) Neuroglobin {Mouse (Mus musculus) [TaxId: 10090]}
Probab=24.81 E-value=1e+02 Score=23.72 Aligned_cols=74 Identities=11% Similarity=0.137 Sum_probs=40.6
Q ss_pred hhhhhhhccccccCcchHHHHHHHHHHh--CCCCChhhHHHHHHHHHHHHHHHHHhC--CHHHHhhhcCHHHHHHHHHHH
Q 013445 298 IVHKIQDMNETIFQETDAAASIKEIRRR--DPSFSLPDFVSEVQEAIRPVLSAYMKG--DVETLKKYCSPEVIERCKAEH 373 (443)
Q Consensus 298 lV~ki~dI~d~lf~eTe~a~vL~eIk~~--DPsFd~~~Fl~gar~ai~pILeAf~kG--D~e~LK~wcseavyn~faa~I 373 (443)
++..+..+++++.....+...|+++-+. --..+++.|- .+.++++-+|...+.. +.++...| ..+|..+...|
T Consensus 66 v~~~l~~~i~~ldd~~~l~~~l~~lg~~H~~~gv~~~~f~-~~~~~l~~~l~~~lg~~~t~e~~~AW--~~~~~~i~~~m 142 (148)
T d1q1fa_ 66 VMLVIDAAVTNVEDLSSLEEYLTSLGRKHRAVGVRLSSFS-TVGESLLYMLEKSLGPDFTPATRTAW--SRLYGAVVQAM 142 (148)
T ss_dssp HHHHHHHHHHTSSCSSSSHHHHHHHHHHHHHHTCCTTHHH-HHHHHHHHHHHHHHGGGSCHHHHHHH--HHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhhccCCCcHHHHH-HHHHHHHHHHHHHccccCCHHHHHHH--HHHHHHHHHHH
Confidence 3355777777887777777777776554 2356777773 3344444444444322 24444445 44455555444
Q ss_pred H
Q 013445 374 T 374 (443)
Q Consensus 374 ~ 374 (443)
+
T Consensus 143 ~ 143 (148)
T d1q1fa_ 143 S 143 (148)
T ss_dssp H
T ss_pred H
Confidence 3
No 12
>d3en8a1 d.17.4.20 (A:1-127) Uncharacterized protein BxeB2092 {Burkholderia xenovorans [TaxId: 36873]}
Probab=23.73 E-value=11 Score=29.14 Aligned_cols=28 Identities=18% Similarity=0.303 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHhCCHHHHhhhcCHHH
Q 013445 338 VQEAIRPVLSAYMKGDVETLKKYCSPEV 365 (443)
Q Consensus 338 ar~ai~pILeAf~kGD~e~LK~wcseav 365 (443)
.++.+.-..+||..||.+.+..++++++
T Consensus 6 ~~~~v~~~~~A~~~gD~da~~~l~adD~ 33 (127)
T d3en8a1 6 IREALNAHWQASAAGDFDAEHDIYDDDA 33 (127)
T ss_dssp HHHHHHHHHHHHHHTCHHHHTTTEEEEE
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHhcCCE
Confidence 4445555789999999999998887653
No 13
>d2geya1 d.17.4.9 (A:2-145) Putative hydroxylase AclR {Streptomyces galilaeus [TaxId: 33899]}
Probab=23.23 E-value=11 Score=29.57 Aligned_cols=22 Identities=23% Similarity=0.359 Sum_probs=19.1
Q ss_pred HHHHHHHHhCCHHHHhhhcCHH
Q 013445 343 RPVLSAYMKGDVETLKKYCSPE 364 (443)
Q Consensus 343 ~pILeAf~kGD~e~LK~wcsea 364 (443)
.-.++||.+||.+.|..+|+++
T Consensus 10 ~~~~~A~n~~D~~~~~~~~a~d 31 (144)
T d2geya1 10 LEMVAAWNRWDLSGIIKHWSPD 31 (144)
T ss_dssp HHHHHHHHTTCTHHHHTTEEEE
T ss_pred HHHHHHHHcCCHHHHHHHhCcc
Confidence 3388999999999999999854
No 14
>d2f86b1 d.17.4.7 (B:343-471) Association domain of calcium/calmodulin-dependent protein kinase type II alpha subunit, CAMK2A {Caenorhabditis elegans [TaxId: 6239]}
Probab=22.56 E-value=17 Score=26.60 Aligned_cols=28 Identities=21% Similarity=0.399 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHhCCHHHHhhhcCHHH
Q 013445 338 VQEAIRPVLSAYMKGDVETLKKYCSPEV 365 (443)
Q Consensus 338 ar~ai~pILeAf~kGD~e~LK~wcseav 365 (443)
+...+.-+.+||..||.+.+..+++++.
T Consensus 11 I~~~~~~~~~A~~~~D~~~~~~~~~~d~ 38 (129)
T d2f86b1 11 IVRVTQTLLDAISCKDFETYTRLCDTSM 38 (129)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHEEEEE
T ss_pred HHHHHHHHHHHHHcCCHHHHHHhhcCCc
Confidence 3444555889999999999999988764
No 15
>d2ux0a1 d.17.4.7 (A:387-521) Association domain of calcium/calmodulin-dependent protein kinase type II alpha subunit, CAMK2A {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.64 E-value=20 Score=26.63 Aligned_cols=28 Identities=29% Similarity=0.559 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHHhCCHHHHhhhcCHH
Q 013445 337 EVQEAIRPVLSAYMKGDVETLKKYCSPE 364 (443)
Q Consensus 337 gar~ai~pILeAf~kGD~e~LK~wcsea 364 (443)
.+...+.-..+||.+||.+.+..+++++
T Consensus 12 eI~~l~~~~~~A~~~~D~~~~~~~~~~d 39 (135)
T d2ux0a1 12 EIIKITEQLIEAINNGDFEAYTKICDPG 39 (135)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHEEEE
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHhCcCC
Confidence 3445566688999999999999998876
Done!