BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013450
(443 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P27608|AROF_TOBAC Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic
OS=Nicotiana tabacum GN=DHAPS-1 PE=2 SV=1
Length = 542
Score = 754 bits (1946), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/444 (82%), Positives = 389/444 (87%), Gaps = 16/444 (3%)
Query: 11 PTKSSFVQPQS---QPF--------ITKPRSNIHPISAVHAADSAKPPSAVKTTTKAPEP 59
P KS VQ QS P TKP + PISA+H++DS+K P + P P
Sbjct: 14 PNKSQLVQNQSLLPSPLKNVSFTTNSTKPVRFVQPISAIHSSDSSKNPIVSDKPSSKPSP 73
Query: 60 -----VLKTSNVGPQKWTVDSWKSKKALQLPEYPDKEELESVLKTLDDFPPIVFAGEARS 114
+ V +WTV+SWKSKKALQLPEYP++EEL+SVLKT+++FPPIVFAGEARS
Sbjct: 74 PAATVTAAATTVTKTEWTVESWKSKKALQLPEYPNQEELQSVLKTIEEFPPIVFAGEARS 133
Query: 115 LEERLAEAAMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGR 174
LEERL EAAMG+AFLLQGGDCAESFKEFNANNIRDTFRILLQMG VLMFGGQMPV+KVGR
Sbjct: 134 LEERLGEAAMGRAFLLQGGDCAESFKEFNANNIRDTFRILLQMGAVLMFGGQMPVIKVGR 193
Query: 175 MAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLL 234
MAGQFAKPRSD FEEKNGVKLPSYRGDNVNGDAFD KSR PDPQRLIRAYCQSAATLNLL
Sbjct: 194 MAGQFAKPRSDNFEEKNGVKLPSYRGDNVNGDAFDAKSRTPDPQRLIRAYCQSAATLNLL 253
Query: 235 RAFATGGYAAMQRVTQWNLDFTEHSEQGDRYRELAHRVDEALGFMSAAGLTVDHPIMTTT 294
RAFATGGYAAMQR+ QWNLDFTEHSEQGDRYRELA+RVDEALGFM+AAGLTVDHPIM TT
Sbjct: 254 RAFATGGYAAMQRINQWNLDFTEHSEQGDRYRELANRVDEALGFMAAAGLTVDHPIMKTT 313
Query: 295 EFWTSHECLLLPYEQSLTRLDSTSGLYYDCSAHFLWVGERTRQLDGAHVEFLKGVANPLG 354
EFWTSHECLLLPYEQSLTRLDSTSGLYYDCSAHF+WVGERTRQLDGAHVEFL+GVANPLG
Sbjct: 314 EFWTSHECLLLPYEQSLTRLDSTSGLYYDCSAHFIWVGERTRQLDGAHVEFLRGVANPLG 373
Query: 355 IKVSDKMDPNELVKLIEILNPQNKPGRITIITRMGAENMRVKLPHLIRAVRRSGQIVTWV 414
IKVSDKMDP+ LVKLIEILNP NK GRITIITRMGAENMRVKLPHLIRAVRR+GQIVTWV
Sbjct: 374 IKVSDKMDPSALVKLIEILNPDNKAGRITIITRMGAENMRVKLPHLIRAVRRAGQIVTWV 433
Query: 415 SDPMHGNTIKAPCGLKTRPFDSIR 438
SDPMHGNTIKAPCGLKTRPFDSIR
Sbjct: 434 SDPMHGNTIKAPCGLKTRPFDSIR 457
>sp|P37216|AROG_SOLLC Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic
OS=Solanum lycopersicum PE=2 SV=1
Length = 541
Score = 752 bits (1942), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/456 (79%), Positives = 391/456 (85%), Gaps = 18/456 (3%)
Query: 1 MALVGSTSITPTKSSFVQPQSQPFITKPRSN-------------IHPISAVHAADSAKPP 47
MAL +T+ S+ Q+QP ++ P N + PI+AVH++DS K P
Sbjct: 1 MALSTNTTTNSLLSNKSLLQNQPLLSSPSKNAFFSNKSTKTVRFVQPIAAVHSSDSNKNP 60
Query: 48 SAVKTTTKAPEPVLKTSN-----VGPQKWTVDSWKSKKALQLPEYPDKEELESVLKTLDD 102
TK+ P + V +W VDSWKSKKALQLPEYPD+EEL SVLKT+D+
Sbjct: 61 IVSDKPTKSSPPAATATTAPAPAVTKTEWAVDSWKSKKALQLPEYPDQEELRSVLKTIDE 120
Query: 103 FPPIVFAGEARSLEERLAEAAMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLM 162
FPPIVFAGEARSLEERL EAAMG+AFLLQGGDCAESFKEFNANNIRDTFRILLQMG VLM
Sbjct: 121 FPPIVFAGEARSLEERLGEAAMGRAFLLQGGDCAESFKEFNANNIRDTFRILLQMGAVLM 180
Query: 163 FGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIR 222
FGGQMPV+KVGRMAGQFAKPRSD FEEK+GVKLPSYRGDNVNGDAFD KSR PDPQRLIR
Sbjct: 181 FGGQMPVIKVGRMAGQFAKPRSDSFEEKDGVKLPSYRGDNVNGDAFDVKSRTPDPQRLIR 240
Query: 223 AYCQSAATLNLLRAFATGGYAAMQRVTQWNLDFTEHSEQGDRYRELAHRVDEALGFMSAA 282
AYCQSAATLNLLRAFATGGYAAMQR+ QWNLDFTEHSEQGDRYRELA RVDEALGFM+AA
Sbjct: 241 AYCQSAATLNLLRAFATGGYAAMQRINQWNLDFTEHSEQGDRYRELASRVDEALGFMTAA 300
Query: 283 GLTVDHPIMTTTEFWTSHECLLLPYEQSLTRLDSTSGLYYDCSAHFLWVGERTRQLDGAH 342
GLT+DHPIM TTEFWTSHECLLLPYEQSLTR DSTSGL+YDCSAHFLWVGERTRQLDGAH
Sbjct: 301 GLTMDHPIMKTTEFWTSHECLLLPYEQSLTRRDSTSGLHYDCSAHFLWVGERTRQLDGAH 360
Query: 343 VEFLKGVANPLGIKVSDKMDPNELVKLIEILNPQNKPGRITIITRMGAENMRVKLPHLIR 402
VEFL+G+ANPLGIKVSDKMDP+ LVKLIEILNPQNK GRITIITRMGAENMRVKLPHLIR
Sbjct: 361 VEFLRGIANPLGIKVSDKMDPSALVKLIEILNPQNKAGRITIITRMGAENMRVKLPHLIR 420
Query: 403 AVRRSGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIR 438
AVRR+GQIVTWVSDPMHGNTIKAPCGLKTRPFDSIR
Sbjct: 421 AVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIR 456
>sp|P21357|AROF_SOLTU Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic
OS=Solanum tuberosum GN=SHKA PE=1 SV=2
Length = 538
Score = 748 bits (1930), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/434 (82%), Positives = 384/434 (88%), Gaps = 9/434 (2%)
Query: 10 TPTKSSFVQPQSQPFITKPRSNIHPISAVHAADSAKPPSAVKTTTKAPEPVLKTSN---- 65
+P K++F S TK + PISAVH++DS K P +K+ P +
Sbjct: 27 SPLKNAFFSNNS----TKTVRFVQPISAVHSSDSNKIPIVSDKPSKSSPPAATATTAPAP 82
Query: 66 -VGPQKWTVDSWKSKKALQLPEYPDKEELESVLKTLDDFPPIVFAGEARSLEERLAEAAM 124
V +W VDSWKSKKALQLPEYP++EEL SVLKT+D+FPPIVFAGEARSLEERL EAAM
Sbjct: 83 AVTKTEWAVDSWKSKKALQLPEYPNQEELRSVLKTIDEFPPIVFAGEARSLEERLGEAAM 142
Query: 125 GKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRS 184
G+AFLLQGGDCAESFKEFNANNIRDTFRILLQMG VLMFGGQMPV+KVGRMAGQFAKPRS
Sbjct: 143 GRAFLLQGGDCAESFKEFNANNIRDTFRILLQMGAVLMFGGQMPVIKVGRMAGQFAKPRS 202
Query: 185 DPFEEKNGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAA 244
D FEEK+GVKLPSYRGDNVNGDAFD KSR PDPQRLIRAYCQSAATLNLLRAFATGGYAA
Sbjct: 203 DSFEEKDGVKLPSYRGDNVNGDAFDVKSRTPDPQRLIRAYCQSAATLNLLRAFATGGYAA 262
Query: 245 MQRVTQWNLDFTEHSEQGDRYRELAHRVDEALGFMSAAGLTVDHPIMTTTEFWTSHECLL 304
MQR+ QWNLDFTEHSEQGDRYRELA RVDEALGFM+AAGLT+DHPIM TTEFWTSHECLL
Sbjct: 263 MQRINQWNLDFTEHSEQGDRYRELASRVDEALGFMTAAGLTMDHPIMKTTEFWTSHECLL 322
Query: 305 LPYEQSLTRLDSTSGLYYDCSAHFLWVGERTRQLDGAHVEFLKGVANPLGIKVSDKMDPN 364
LPYEQSLTR DSTSGLYYDCSAHFLWVGERTRQLDGAHVEFL+G+ANPLGIKVSDKMDP+
Sbjct: 323 LPYEQSLTRRDSTSGLYYDCSAHFLWVGERTRQLDGAHVEFLRGIANPLGIKVSDKMDPS 382
Query: 365 ELVKLIEILNPQNKPGRITIITRMGAENMRVKLPHLIRAVRRSGQIVTWVSDPMHGNTIK 424
LVKLIEILNPQNK GRITIITRMGAENMRVKLPHLIRAVRR+GQIVTWVSDPMHGNTIK
Sbjct: 383 ALVKLIEILNPQNKAGRITIITRMGAENMRVKLPHLIRAVRRAGQIVTWVSDPMHGNTIK 442
Query: 425 APCGLKTRPFDSIR 438
APCGLKTRPFDSIR
Sbjct: 443 APCGLKTRPFDSIR 456
>sp|Q75W16|AROG_ORYSJ Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic
OS=Oryza sativa subsp. japonica GN=DAHPS2 PE=2 SV=1
Length = 539
Score = 721 bits (1862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/409 (84%), Positives = 371/409 (90%), Gaps = 6/409 (1%)
Query: 35 ISAVHAADSAKPPSAVKTTTKAPEPVL----KTSNVGPQKWTVDSWKSKKALQLPEYPDK 90
+SAVHAAD AK V+ KA P + VG KWTVDSWK+KKALQLPEYP +
Sbjct: 38 VSAVHAADPAKSNGPVQAAAKASSPSTVAAPEKKPVGLGKWTVDSWKAKKALQLPEYPSQ 97
Query: 91 EELESVLKTLDDFPPIVFAGEARSLEERLAEAAMGKAFLLQGGDCAESFKEFNANNIRDT 150
EEL+SVLKT++ FPP+VFAGEAR LEERLA+AAMG+AF+LQGGDCAESFKEFNANNIRDT
Sbjct: 98 EELDSVLKTIETFPPVVFAGEARHLEERLADAAMGRAFVLQGGDCAESFKEFNANNIRDT 157
Query: 151 FRILLQMGVVLMFGGQMPVVKV-GRMAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFD 209
FRILLQMG VLMFGGQMPVVKV GRMAGQFAKPRSD FEE++GVKLPSYRGDN+NGD FD
Sbjct: 158 FRILLQMGAVLMFGGQMPVVKVVGRMAGQFAKPRSDSFEERDGVKLPSYRGDNINGDTFD 217
Query: 210 EKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRVTQWNLDFTEHSEQGDR-YREL 268
EKSR PDPQR+IRAY QS ATLNLLRAFATGGYAAMQRVTQWNLDF +HSEQGDR YREL
Sbjct: 218 EKSRVPDPQRMIRAYAQSVATLNLLRAFATGGYAAMQRVTQWNLDFMDHSEQGDRRYREL 277
Query: 269 AHRVDEALGFMSAAGLTVDHPIMTTTEFWTSHECLLLPYEQSLTRLDSTSGLYYDCSAHF 328
AHRVDEALGFM+AAGLTVDHPIMTTT+FWTSHECLLLPYEQSLTR DSTSGL+YDCSAH
Sbjct: 278 AHRVDEALGFMTAAGLTVDHPIMTTTDFWTSHECLLLPYEQSLTREDSTSGLFYDCSAHM 337
Query: 329 LWVGERTRQLDGAHVEFLKGVANPLGIKVSDKMDPNELVKLIEILNPQNKPGRITIITRM 388
LWVGERTRQLDGAHVEFL+GVANPLGIKVSDKM+P +LVKLIEILNP NKPGRITIITRM
Sbjct: 338 LWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMNPRDLVKLIEILNPSNKPGRITIITRM 397
Query: 389 GAENMRVKLPHLIRAVRRSGQIVTWVSDPMHGNTIKAPCGLKTRPFDSI 437
GAENMRVKLPHLIRAVR SGQIVTW++DPMHGNTIKAPCGLKTRPFDSI
Sbjct: 398 GAENMRVKLPHLIRAVRNSGQIVTWITDPMHGNTIKAPCGLKTRPFDSI 446
>sp|Q75LR2|AROF_ORYSJ Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic
OS=Oryza sativa subsp. japonica GN=DAHPS1 PE=2 SV=2
Length = 554
Score = 715 bits (1846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/457 (74%), Positives = 382/457 (83%), Gaps = 24/457 (5%)
Query: 2 ALVGSTSITPTKSSFVQPQSQPFITKPRSNIHPISAVHAADSAK-PPSAVKTTTKAPEPV 60
++ G ++ P ++ + F+T R + AVHAA+ +K PP V + K P
Sbjct: 8 SMAGGAAVVPRSATATTASA--FVTMKRRAT-AVRAVHAAEPSKNPPVGVPSAAKTSSPS 64
Query: 61 LK--------------------TSNVGPQKWTVDSWKSKKALQLPEYPDKEELESVLKTL 100
+ T V P +W VDSW++KKALQLPEYP+ ELE+VLKT+
Sbjct: 65 VAAPEKAPVAAAPAPVAPAPAATKQVAPARWAVDSWRTKKALQLPEYPNAAELEAVLKTI 124
Query: 101 DDFPPIVFAGEARSLEERLAEAAMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVV 160
+ FPPIVFAGEAR LEERLA+AAMG+AFLLQGGDCAESFKEFN NNIRDTFR+LLQM V
Sbjct: 125 EAFPPIVFAGEARHLEERLADAAMGRAFLLQGGDCAESFKEFNGNNIRDTFRVLLQMSAV 184
Query: 161 LMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDEKSRNPDPQRL 220
L FGGQMPV+KVGRMAGQFAKPRS+ FEE++GVKLPSYRGDN+NGDAF+EKSR PDPQR+
Sbjct: 185 LTFGGQMPVIKVGRMAGQFAKPRSEAFEERDGVKLPSYRGDNINGDAFNEKSRIPDPQRM 244
Query: 221 IRAYCQSAATLNLLRAFATGGYAAMQRVTQWNLDFTEHSEQGDRYRELAHRVDEALGFMS 280
+RAY QSAATLNLLRAFATGGYAAMQRVTQWNLDFT+HSEQGDRYRELAHRVDEALGFMS
Sbjct: 245 VRAYAQSAATLNLLRAFATGGYAAMQRVTQWNLDFTQHSEQGDRYRELAHRVDEALGFMS 304
Query: 281 AAGLTVDHPIMTTTEFWTSHECLLLPYEQSLTRLDSTSGLYYDCSAHFLWVGERTRQLDG 340
AAGLTVDHP+MT+T+FWTSHECLLLPYEQSLTR DST+G +YDCSAH LWVGERTRQLDG
Sbjct: 305 AAGLTVDHPLMTSTDFWTSHECLLLPYEQSLTRQDSTTGHFYDCSAHMLWVGERTRQLDG 364
Query: 341 AHVEFLKGVANPLGIKVSDKMDPNELVKLIEILNPQNKPGRITIITRMGAENMRVKLPHL 400
AHVEFL+GVANPLGIKVSDKM+P ELVKLIEILNP NKPGRITIITRMGAENMRVKLPHL
Sbjct: 365 AHVEFLRGVANPLGIKVSDKMNPTELVKLIEILNPSNKPGRITIITRMGAENMRVKLPHL 424
Query: 401 IRAVRRSGQIVTWVSDPMHGNTIKAPCGLKTRPFDSI 437
IRAVR +GQIVTW++DPMHGNTIKAPCGLKTRPFDSI
Sbjct: 425 IRAVRHAGQIVTWITDPMHGNTIKAPCGLKTRPFDSI 461
>sp|P37215|AROF_SOLLC Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic
OS=Solanum lycopersicum PE=2 SV=1
Length = 511
Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/421 (80%), Positives = 370/421 (87%), Gaps = 18/421 (4%)
Query: 18 QPQSQPFITKPRSNIHPISAVHAADSAKPPSAVKTTTKAPEPVLKTSNVGPQKWTVDSWK 77
QP+ F T HPISAVHAA+ +K +AVK KW++DSWK
Sbjct: 27 QPRFSLFPTTQHGRRHPISAVHAAEPSK--TAVKQG----------------KWSLDSWK 68
Query: 78 SKKALQLPEYPDKEELESVLKTLDDFPPIVFAGEARSLEERLAEAAMGKAFLLQGGDCAE 137
+KKALQLPEYPD++ELESVLKTL+ PP+VFAGEARSLEE+L EAA+GKAFLLQGGDCAE
Sbjct: 69 TKKALQLPEYPDEKELESVLKTLEMNPPLVFAGEARSLEEKLGEAALGKAFLLQGGDCAE 128
Query: 138 SFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPS 197
SFKEFNANNIRDTFRILLQM VVLMFGGQ+PV+KVGRMAGQFAKPRSDPFEE NGVKLPS
Sbjct: 129 SFKEFNANNIRDTFRILLQMSVVLMFGGQVPVIKVGRMAGQFAKPRSDPFEEINGVKLPS 188
Query: 198 YRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRVTQWNLDFTE 257
Y+GDN+NGD FDEKSR PDP RLIRAY QSAATLNLLRAFATGGYAAMQRVT+WNLDF E
Sbjct: 189 YKGDNINGDTFDEKSRIPDPHRLIRAYMQSAATLNLLRAFATGGYAAMQRVTEWNLDFVE 248
Query: 258 HSEQGDRYRELAHRVDEALGFMSAAGLTVDHPIMTTTEFWTSHECLLLPYEQSLTRLDST 317
+SEQGDRY+ELAHRVDEALGFM+AAGLTVDHPIM+TT+FWTSHECLLLPYEQ+LTR DST
Sbjct: 249 NSEQGDRYQELAHRVDEALGFMAAAGLTVDHPIMSTTDFWTSHECLLLPYEQALTREDST 308
Query: 318 SGLYYDCSAHFLWVGERTRQLDGAHVEFLKGVANPLGIKVSDKMDPNELVKLIEILNPQN 377
SGL+YDCSAH +WVGERTRQLDGAHVEFL+GVANPLGIKVS KMDP EL+KLI+ILNP N
Sbjct: 309 SGLFYDCSAHMVWVGERTRQLDGAHVEFLRGVANPLGIKVSQKMDPKELIKLIDILNPAN 368
Query: 378 KPGRITIITRMGAENMRVKLPHLIRAVRRSGQIVTWVSDPMHGNTIKAPCGLKTRPFDSI 437
KPGRIT+I RMGAENMRVKL HL+RAVR +GQIVTWV DPMHGNTIKAPCGLKTR FDSI
Sbjct: 369 KPGRITVIVRMGAENMRVKLSHLVRAVRGAGQIVTWVCDPMHGNTIKAPCGLKTRAFDSI 428
Query: 438 R 438
+
Sbjct: 429 Q 429
>sp|P37822|AROG_SOLTU Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic
OS=Solanum tuberosum GN=SHKB PE=2 SV=1
Length = 511
Score = 700 bits (1806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/420 (80%), Positives = 368/420 (87%), Gaps = 18/420 (4%)
Query: 18 QPQSQPFITKPRSNIHPISAVHAADSAKPPSAVKTTTKAPEPVLKTSNVGPQKWTVDSWK 77
QP+ F T HPISAVHAA+ +K +AVK KW++DSWK
Sbjct: 27 QPRFSLFPTTQHGRRHPISAVHAAEPSK--TAVKQG----------------KWSLDSWK 68
Query: 78 SKKALQLPEYPDKEELESVLKTLDDFPPIVFAGEARSLEERLAEAAMGKAFLLQGGDCAE 137
+KKALQLPEYPD++ELESVLKTL+ PP+VFAGEARSLEE+L EAA+GKAFLLQGGDCAE
Sbjct: 69 TKKALQLPEYPDEKELESVLKTLEMNPPLVFAGEARSLEEKLGEAALGKAFLLQGGDCAE 128
Query: 138 SFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPS 197
SFKEFNANNIRDTFRILLQM VVLMFGGQ+PV+KVGRMAGQFAKPRSDP EE NGVKLPS
Sbjct: 129 SFKEFNANNIRDTFRILLQMSVVLMFGGQVPVIKVGRMAGQFAKPRSDPLEEINGVKLPS 188
Query: 198 YRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRVTQWNLDFTE 257
Y+GDN+NGD FDEKSR PDP RLIRAY QSAATLNLLRAFATGGYAAMQRVT+WNLDF E
Sbjct: 189 YKGDNINGDTFDEKSRIPDPHRLIRAYMQSAATLNLLRAFATGGYAAMQRVTEWNLDFVE 248
Query: 258 HSEQGDRYRELAHRVDEALGFMSAAGLTVDHPIMTTTEFWTSHECLLLPYEQSLTRLDST 317
+ EQGDRY+ELAHRVDEALGFM+AAGLTVDHPIM+TT+FWTSHECLLLPYEQ+LTR DST
Sbjct: 249 NCEQGDRYQELAHRVDEALGFMAAAGLTVDHPIMSTTDFWTSHECLLLPYEQALTREDST 308
Query: 318 SGLYYDCSAHFLWVGERTRQLDGAHVEFLKGVANPLGIKVSDKMDPNELVKLIEILNPQN 377
SGL+YDCSAH +WVGERTRQLDGAHVEFL+GVANPLGIKVS KMDPNEL+KLI+ILNP N
Sbjct: 309 SGLFYDCSAHMVWVGERTRQLDGAHVEFLRGVANPLGIKVSQKMDPNELIKLIDILNPAN 368
Query: 378 KPGRITIITRMGAENMRVKLPHLIRAVRRSGQIVTWVSDPMHGNTIKAPCGLKTRPFDSI 437
KPGRIT+I RMGAENMRVKL HL+RAVR +GQIVTWV DPMHGNTIKAPCGLKTR FDSI
Sbjct: 369 KPGRITVIVRMGAENMRVKLSHLVRAVRGAGQIVTWVCDPMHGNTIKAPCGLKTRAFDSI 428
>sp|P29976|AROF_ARATH Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic
OS=Arabidopsis thaliana GN=DHS1 PE=2 SV=2
Length = 525
Score = 697 bits (1798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/412 (79%), Positives = 368/412 (89%), Gaps = 8/412 (1%)
Query: 26 TKPRSNIHPISAVHAADSAKPPSAVKTTTKAPEPVLKTSNVGPQKWTVDSWKSKKALQLP 85
TKP+S ++ ++AVHAA+ A+ +VK + + +S+ G KWT +SWK KKALQLP
Sbjct: 38 TKPKS-VNLVTAVHAAEPARNAVSVKES-------VASSSSGALKWTPESWKLKKALQLP 89
Query: 86 EYPDKEELESVLKTLDDFPPIVFAGEARSLEERLAEAAMGKAFLLQGGDCAESFKEFNAN 145
+YP+ ELESVLKT++ FPPIVFAGEAR+LEERLA+AA+GKAFLLQGGDCAESFKEFNA
Sbjct: 90 DYPNANELESVLKTIEAFPPIVFAGEARNLEERLADAAVGKAFLLQGGDCAESFKEFNAT 149
Query: 146 NIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNVNG 205
NIRDTFR+LLQM +VL FGGQ+PV+KVGRMAGQFAKPRSD FEEK+GVKLPSY+GDN+NG
Sbjct: 150 NIRDTFRVLLQMSIVLTFGGQVPVIKVGRMAGQFAKPRSDAFEEKDGVKLPSYKGDNING 209
Query: 206 DAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRVTQWNLDFTEHSEQGDRY 265
D FDEKSR PDP R+IRAY QSAATLNLLRAFATGGYAA+QRVTQWNLDF E SEQ DRY
Sbjct: 210 DTFDEKSRIPDPNRMIRAYTQSAATLNLLRAFATGGYAAIQRVTQWNLDFVEQSEQADRY 269
Query: 266 RELAHRVDEALGFMSAAGLTVDHPIMTTTEFWTSHECLLLPYEQSLTRLDSTSGLYYDCS 325
+ELA+RVDEALGFMSA GL DHP+MTTT+F+TSHECLLLPYEQSLTRLDSTSGLYYDCS
Sbjct: 270 QELANRVDEALGFMSACGLGTDHPLMTTTDFYTSHECLLLPYEQSLTRLDSTSGLYYDCS 329
Query: 326 AHFLWVGERTRQLDGAHVEFLKGVANPLGIKVSDKMDPNELVKLIEILNPQNKPGRITII 385
AH +W GERTRQLDGAHVEFL+G+ANPLGIKVS+KMDP ELVKL+EILNP NKPGRIT+I
Sbjct: 330 AHMVWCGERTRQLDGAHVEFLRGIANPLGIKVSNKMDPFELVKLVEILNPNNKPGRITVI 389
Query: 386 TRMGAENMRVKLPHLIRAVRRSGQIVTWVSDPMHGNTIKAPCGLKTRPFDSI 437
RMGAENMRVKLPHLIRAVRRSGQIVTWV DPMHGNTIKAPCGLKTR FDSI
Sbjct: 390 VRMGAENMRVKLPHLIRAVRRSGQIVTWVCDPMHGNTIKAPCGLKTRAFDSI 441
>sp|Q00218|AROG_ARATH Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic
OS=Arabidopsis thaliana GN=DHS2 PE=2 SV=2
Length = 507
Score = 693 bits (1789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/418 (78%), Positives = 367/418 (87%), Gaps = 17/418 (4%)
Query: 23 PFITKPRSNIH--PISAVHAADSAKPPSAVKTTTKAPEPVLKTSNVGPQKWTVDSWKSKK 80
P+ PR I P+ AVH+ D K +T A V KW+++SWKSKK
Sbjct: 17 PYRHAPRRPISFSPVFAVHSTDPKK------STQSASASV---------KWSLESWKSKK 61
Query: 81 ALQLPEYPDKEELESVLKTLDDFPPIVFAGEARSLEERLAEAAMGKAFLLQGGDCAESFK 140
ALQLP+YPD+++++SVL+TL FPPIVFAGEAR LE++L +AAMG+AF+LQGGDCAESFK
Sbjct: 62 ALQLPDYPDQKDVDSVLQTLSSFPPIVFAGEARKLEDKLGQAAMGQAFMLQGGDCAESFK 121
Query: 141 EFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYRG 200
EFNANNIRDTFR+LLQMGVVLMFGGQ+PV+KVGRMAGQFAKPRSDPFEEK+GVKLPSYRG
Sbjct: 122 EFNANNIRDTFRVLLQMGVVLMFGGQLPVIKVGRMAGQFAKPRSDPFEEKDGVKLPSYRG 181
Query: 201 DNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRVTQWNLDFTEHSE 260
DN+NGDAFDEKSR PDP R++RAY QS ATLNLLRAFATGGYAAMQRV+QWNLDFT+HSE
Sbjct: 182 DNINGDAFDEKSRIPDPHRMVRAYTQSVATLNLLRAFATGGYAAMQRVSQWNLDFTQHSE 241
Query: 261 QGDRYRELAHRVDEALGFMSAAGLTVDHPIMTTTEFWTSHECLLLPYEQSLTRLDSTSGL 320
QGDRYRELA+RVDEALGFM AAGLT HPIMTTTEFWTSHECLLLPYEQ+LTR DSTSGL
Sbjct: 242 QGDRYRELANRVDEALGFMGAAGLTSAHPIMTTTEFWTSHECLLLPYEQALTREDSTSGL 301
Query: 321 YYDCSAHFLWVGERTRQLDGAHVEFLKGVANPLGIKVSDKMDPNELVKLIEILNPQNKPG 380
YYDCSAH LWVGERTRQLDGAHVEFL+G+ANPLGIKVSDKM P+ELVKLIEILNPQNKPG
Sbjct: 302 YYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKVSDKMVPSELVKLIEILNPQNKPG 361
Query: 381 RITIITRMGAENMRVKLPHLIRAVRRSGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIR 438
RIT+I RMGAENMRVKLP+LIRAVR +GQIVTWVSDPMHGNTI AP GLKTR FD+IR
Sbjct: 362 RITVIVRMGAENMRVKLPNLIRAVRGAGQIVTWVSDPMHGNTIMAPGGLKTRSFDAIR 419
>sp|A0MH68|AROF_CATRO Probable phospho-2-dehydro-3-deoxyheptonate aldolase, chloroplastic
OS=Catharanthus roseus GN=DHS1 PE=2 SV=2
Length = 493
Score = 522 bits (1344), Expect = e-147, Method: Compositional matrix adjust.
Identities = 274/419 (65%), Positives = 306/419 (73%), Gaps = 43/419 (10%)
Query: 27 KPRSNIHPISA-VHAADSAKPPSAVKTTTKAPEPVLKTSNVGPQKWTVDSWKSKKALQLP 85
KPRS+ PISA VH K P + T TK +L W +SWKSKKALQLP
Sbjct: 36 KPRSS-RPISAAVHVTQPPKTPISSATATKRRLSLLNGV------W--ESWKSKKALQLP 86
Query: 86 EYPDKEELESVLKTLDDFPPIVFAGEARSLEERLAEAAMGKAFLLQGGDCAESFKE---- 141
EYPD+ +L+ VLKT++ FPP+VFAGEARSLEE+LA+AAMG AFLLQGGDCAESFKE
Sbjct: 87 EYPDEGKLDGVLKTIEAFPPLVFAGEARSLEEKLAQAAMGNAFLLQGGDCAESFKELMPL 146
Query: 142 ---FNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSY 198
+ N D R L FGGQ PV+KVGRMAGQFAKPR DPFEEK+G+ L
Sbjct: 147 YSRYFQNTASDECR--------LTFGGQCPVIKVGRMAGQFAKPRLDPFEEKDGLWLSGA 198
Query: 199 RGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRVTQWNLDFTEH 258
G V +A+ + + + L+ C A + + +LDF EH
Sbjct: 199 NGWPVAWEAYCKLQQLSPSRALLLVVCCYAESHPM------------------DLDFVEH 240
Query: 259 SEQGDRYRELAHRVDEALGFMSAAGLTVDHPIMTTTEFWTSHECLLLPYEQSLTRLDSTS 318
SEQGDRY+ELAHRVDEALGFM A GLTVDHPIM TTEFWTSHECLLLPYEQ+LTR DSTS
Sbjct: 241 SEQGDRYQELAHRVDEALGFMDACGLTVDHPIMATTEFWTSHECLLLPYEQALTREDSTS 300
Query: 319 GLYYDCSAHFLWVGERTRQLDGAHVEFLKGVANPLGIKVSDKMDPNELVKLIEILNPQNK 378
GL+YDCSAH LWVGERTRQLDGAHVEFL+GVANPLGIKVS KMDPNELV LIEILNP NK
Sbjct: 301 GLFYDCSAHMLWVGERTRQLDGAHVEFLRGVANPLGIKVSQKMDPNELVNLIEILNPTNK 360
Query: 379 PGRITIITRMGAENMRVKLPHLIRAVRRSGQIVTWVSDPMHGNTIKAPCGLKTRPFDSI 437
PGRIT+I RMGAENMRVKLPHLIRAVR +GQIVTWV DPMHGNTIKAPCGLKTR FD+I
Sbjct: 361 PGRITVIVRMGAENMRVKLPHLIRAVRGAGQIVTWVCDPMHGNTIKAPCGLKTRAFDAI 419
>sp|P80574|AROF_STRCO Phospho-2-dehydro-3-deoxyheptonate aldolase OS=Streptomyces
coelicolor (strain ATCC BAA-471 / A3(2) / M145) GN=aroH
PE=1 SV=3
Length = 450
Score = 410 bits (1054), Expect = e-113, Method: Compositional matrix adjust.
Identities = 193/364 (53%), Positives = 252/364 (69%), Gaps = 2/364 (0%)
Query: 74 DSWKSKKALQLPEYPDKEELESVLKTLDDFPPIVFAGEARSLEERLAEAAMGKAFLLQGG 133
++W+ A Q PEYPD E L +V+ L+ +PP+VFAGE L R+A A G+AFLLQGG
Sbjct: 13 NTWRDLPAAQQPEYPDTEALRAVIADLESYPPLVFAGECDQLRARMAAVAKGEAFLLQGG 72
Query: 134 DCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGV 193
DCAE+F +A++IR+ + LLQMG VL + +PVVKVGR+AGQ++KPRS P E ++GV
Sbjct: 73 DCAEAFDAVSADHIRNKLKTLLQMGAVLTYAASVPVVKVGRIAGQYSKPRSKPTETRDGV 132
Query: 194 KLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRVTQWNL 253
LP+YRGD+VNG F E +R PDP+RL R Y SA+TLNL+RAF TGGYA +++V WN
Sbjct: 133 TLPTYRGDSVNGFDFTEAARIPDPERLKRMYHASASTLNLVRAFTTGGYADLRQVHAWNQ 192
Query: 254 DFTEHSEQGDRYRELAHRVDEALGFMSAAGLTVDHPIMTTTEFWTSHECLLLPYEQSLTR 313
DF + S G RY +LA +D AL FM A G D T EF++SHE LLL YE +LTR
Sbjct: 193 DFVKSSPSGQRYEQLAREIDNALNFMRACG--TDPAEFQTVEFFSSHEALLLDYESALTR 250
Query: 314 LDSTSGLYYDCSAHFLWVGERTRQLDGAHVEFLKGVANPLGIKVSDKMDPNELVKLIEIL 373
+DS +G YD S H +W+GERTRQLD AH+EF + NP+GIK+ E ++ IE L
Sbjct: 251 VDSRTGQLYDVSGHMVWIGERTRQLDHAHIEFASRIRNPIGIKLGPSTTAEEALQYIERL 310
Query: 374 NPQNKPGRITIITRMGAENMRVKLPHLIRAVRRSGQIVTWVSDPMHGNTIKAPCGLKTRP 433
+P+ +PGR+T I RMGA+ +R KLP L+ V SG V W++DPMHGNT +A G KTR
Sbjct: 311 DPEREPGRLTFIVRMGADKIRDKLPELVEKVTASGATVAWITDPMHGNTYEAASGHKTRR 370
Query: 434 FDSI 437
FD +
Sbjct: 371 FDDV 374
>sp|A0R033|AROG_MYCS2 Phospho-2-dehydro-3-deoxyheptonate aldolase AroG OS=Mycobacterium
smegmatis (strain ATCC 700084 / mc(2)155) GN=aroG PE=3
SV=1
Length = 464
Score = 330 bits (846), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 171/370 (46%), Positives = 234/370 (63%), Gaps = 11/370 (2%)
Query: 73 VDSWKSKKALQLPEYPDKEELESVLKTLDDFPPIVFAGEARSLEERLAEAAMGKAFLLQG 132
+DS +K A+Q P + D + +++ L+ PP+ E L+ LA+ A GKAFLLQG
Sbjct: 26 LDSALAKPAVQQPSW-DPDAAKAMRTVLESVPPVTVPSEIEKLKGLLADVAQGKAFLLQG 84
Query: 133 GDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNG 192
GDCAE+F + +IR R LLQM VVL +G MPVVKV R+AGQ+AKPRS + +
Sbjct: 85 GDCAETFVDNTEPHIRANIRTLLQMAVVLTYGASMPVVKVARIAGQYAKPRS---SDVDA 141
Query: 193 VKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRVTQWN 252
+ L SYRGD +NG A D +R DP RL+RAY ++A +NL+RA + G A++ V +WN
Sbjct: 142 LGLKSYRGDMINGFAPDAAAREHDPSRLVRAYANASAAMNLMRALTSSGLASLHLVHEWN 201
Query: 253 LDFTEHSEQGDRYRELAHRVDEALGFMSAAGLTVDHPIMTTTEFWTSHECLLLPYEQSLT 312
+F S G RY LA +D L FMSA G+ + + T E + SHE L+L YE+++
Sbjct: 202 REFVRTSPAGARYEALAGEIDRGLNFMSACGVADRN--LQTAEIFASHEALVLDYERAML 259
Query: 313 RLDS---TSGL--YYDCSAHFLWVGERTRQLDGAHVEFLKGVANPLGIKVSDKMDPNELV 367
RL + T G YD SAH+LW+GERTRQLDGAHV F + +ANP+G+K+ P V
Sbjct: 260 RLSNPAETDGAAKLYDQSAHYLWIGERTRQLDGAHVAFAEVIANPIGVKLGPTTTPELAV 319
Query: 368 KLIEILNPQNKPGRITIITRMGAENMRVKLPHLIRAVRRSGQIVTWVSDPMHGNTIKAPC 427
+ +E L+P N+PGR+T++TRMG +R LP +I V+ +G V W DPMHGNT ++
Sbjct: 320 EYVERLDPNNEPGRLTLVTRMGNNKVRDLLPPIIEKVQATGHQVIWQCDPMHGNTHESST 379
Query: 428 GLKTRPFDSI 437
G KTR FD I
Sbjct: 380 GYKTRHFDRI 389
>sp|O53512|AROG_MYCTU Phospho-2-dehydro-3-deoxyheptonate aldolase AroG OS=Mycobacterium
tuberculosis GN=aroG PE=1 SV=1
Length = 462
Score = 327 bits (839), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 166/368 (45%), Positives = 232/368 (63%), Gaps = 9/368 (2%)
Query: 73 VDSWKSKKALQLPEYPDKEELESVLKTLDDFPPIVFAGEARSLEERLAEAAMGKAFLLQG 132
+D+ +K A Q P +P + L ++ L+ PP+ E L+E+LA+ A G+AFLLQG
Sbjct: 26 LDAALAKPAAQQPTWPADQAL-AMRTVLESVPPVTVPSEIVRLQEQLAQVAKGEAFLLQG 84
Query: 133 GDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNG 192
GDCAE+F + +IR R LLQM VVL +G MPVVKV R+AGQ+AKPRS + +
Sbjct: 85 GDCAETFMDNTEPHIRGNVRALLQMAVVLTYGASMPVVKVARIAGQYAKPRS---ADIDA 141
Query: 193 VKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRVTQWN 252
+ L SYRGD +NG A D +R DP RL+RAY ++A +NL+RA + G A++ V WN
Sbjct: 142 LGLRSYRGDMINGFAPDAAAREHDPSRLVRAYANASAAMNLVRALTSSGLASLHLVHDWN 201
Query: 253 LDFTEHSEQGDRYRELAHRVDEALGFMSAAGLTVDHPIMTTTEFWTSHECLLLPYEQSLT 312
+F S G RY LA +D L FMSA G+ + + T E + SHE L+L YE+++
Sbjct: 202 REFVRTSPAGARYEALATEIDRGLRFMSACGVADRN--LQTAEIYASHEALVLDYERAML 259
Query: 313 RL---DSTSGLYYDCSAHFLWVGERTRQLDGAHVEFLKGVANPLGIKVSDKMDPNELVKL 369
RL D +D SAH +W+GERTRQ+DGAH+ F + +ANP+G+K+ M P V+
Sbjct: 260 RLSDGDDGEPQLFDLSAHTVWIGERTRQIDGAHIAFAQVIANPVGVKLGPNMTPELAVEY 319
Query: 370 IEILNPQNKPGRITIITRMGAENMRVKLPHLIRAVRRSGQIVTWVSDPMHGNTIKAPCGL 429
+E L+P NKPGR+T+++RMG +R LP ++ V+ +G V W DPMHGNT ++ G
Sbjct: 320 VERLDPHNKPGRLTLVSRMGNHKVRDLLPPIVEKVQATGHQVIWQCDPMHGNTHESSTGF 379
Query: 430 KTRPFDSI 437
KTR FD I
Sbjct: 380 KTRHFDRI 387
>sp|P80576|AROF_NEUCR Phospho-2-dehydro-3-deoxyheptonate aldolase OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=aro-8 PE=1 SV=2
Length = 481
Score = 314 bits (804), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 174/383 (45%), Positives = 225/383 (58%), Gaps = 19/383 (4%)
Query: 71 WTVDSWKSKKALQLPEYPDKEELESVLKTLDDFPPIVFAGEARSLEERLAEAAMGKAFLL 130
W DSW+SK Q PEYPDK LE L PPIV E L E L + A GKAFLL
Sbjct: 12 WAPDSWRSKPIKQCPEYPDKAALEKATNELKTLPPIVLPNEIIRLREHLRDVAQGKAFLL 71
Query: 131 QGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEK 190
QGGDCAE F + I ++LLQM +VL++G PVV++GRMAGQ+AKPRS P E
Sbjct: 72 QGGDCAELFSYCQQDVIESKIKLLLQMSLVLLWGADKPVVRIGRMAGQYAKPRSSPVETI 131
Query: 191 NGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRVTQ 250
NG ++PS+RGD +NG F R DP RL+RAY S+ATLN +R G A +
Sbjct: 132 NGKEVPSFRGDILNG--FHPDERELDPNRLVRAYQYSSATLNYIRGAIGSGIADLHGPLD 189
Query: 251 WNLDFTEHSEQGDRYRELAHRVDEALGFMSAAGLTVDHPIMTTTEFWTSHECLLLPYEQS 310
W L +Y+E R+ E L FM G + ++T E +TSHE LLL YE+
Sbjct: 190 WGLGHVRDPALKSKYQETVDRIQEMLRFMHTIGADQNEK-LSTVELFTSHEGLLLEYEEP 248
Query: 311 LTRL-----------DSTS---GLYYDCSAHFLWVGERTRQLDGAHVEFLKGVANPLGIK 356
LTRL DST+ YY+ SAHFLW+G+RTRQ+D AHVE+ +G+ANP+G+K
Sbjct: 249 LTRLLNHPSVRSYPPDSTTPPKKEYYNTSAHFLWIGDRTRQIDHAHVEYFRGIANPIGVK 308
Query: 357 VSDKMDPNELVKLIEILNPQNKPGRITIITRMGAENMRVKLPHLIRAVRRS--GQIVTWV 414
+ ++L+ ++ LNP +PG++T+ITR GA+ + LP IR V S + V W
Sbjct: 309 IGPSTPTSDLLPMLRTLNPNREPGKVTLITRYGADKVASLLPAHIRTVESSEYARTVVWQ 368
Query: 415 SDPMHGNTIKAPCGLKTRPFDSI 437
DPMHGNT G+KTR F I
Sbjct: 369 CDPMHGNTQSVSGGIKTRKFSDI 391
>sp|Q51789|PHZC_PSEFL Probable phospho-2-dehydro-3-deoxyheptonate aldolase OS=Pseudomonas
fluorescens GN=phzC PE=3 SV=1
Length = 400
Score = 227 bits (579), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 137/358 (38%), Positives = 184/358 (51%), Gaps = 47/358 (13%)
Query: 80 KALQLPEYPDKEELESVLKTLDDFPPIVFAGEARSLEERLAEAAMGKAFLLQGGDCAESF 139
+ALQ P++ + +L L D ++ + L LA A G+A ++Q GDCAE
Sbjct: 12 EALQQPQWSEPSQLHDAQAYLRDSASLIRVEDILVLRATLARVAAGEAMIIQCGDCAEDM 71
Query: 140 KEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYR 199
E A+++ +L + Q PVV+VGR+AGQFAKPRS+ E V+LP YR
Sbjct: 72 DESAADHVTRKAALLDMLAGTFRLVTQQPVVRVGRIAGQFAKPRSNHSERIGDVELPVYR 131
Query: 200 GDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRVTQWNLDFTEHS 259
GD VNG R D QRL+R GY A Q + Q +L + E S
Sbjct: 132 GDMVNGRDAVLGHRQHDAQRLVR------------------GYRAAQDIMQ-HLGWKEPS 172
Query: 260 EQGDRYRELAHRVDEALGFMSAAGLTVDHPIMTTTEFWTSHECLLLPYEQSLTRLDSTSG 319
Q +T + WTSHE L+L YE R D G
Sbjct: 173 GQEQ---------------------------LTGSPAWTSHEMLVLDYELPQVRRDE-QG 204
Query: 320 LYYDCSAHFLWVGERTRQLDGAHVEFLKGVANPLGIKVSDKMDPNELVKLIEILNPQNKP 379
+ S H+ W+GERTRQL GAHV L V NP+ KV + ++L+ L E L+P+ +P
Sbjct: 205 RTFLGSTHWPWIGERTRQLTGAHVALLSEVLNPVACKVGPDITQDQLLSLCERLDPRREP 264
Query: 380 GRITIITRMGAENMRVKLPHLIRAVRRSGQIVTWVSDPMHGNTIKAPCGLKTRPFDSI 437
GR+T+I RMGA + +LP L+ AVRR+G + W+SDPMHGNTI APCG KTR +I
Sbjct: 265 GRLTLIARMGAHKVADRLPPLVEAVRRAGHKIIWLSDPMHGNTIVAPCGNKTRMVQTI 322
>sp|Q51517|PHZC_PSECL Probable phospho-2-dehydro-3-deoxyheptonate aldolase OS=Pseudomonas
chlororaphis GN=phzC PE=3 SV=1
Length = 400
Score = 218 bits (555), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 132/360 (36%), Positives = 184/360 (51%), Gaps = 47/360 (13%)
Query: 78 SKKALQLPEYPDKEELESVLKTLDDFPPIVFAGEARSLEERLAEAAMGKAFLLQGGDCAE 137
S +A Q P++ + +L L D ++ + L LA A G+A ++Q GDCAE
Sbjct: 10 SCEAFQQPQWSEPSQLHDAQAYLRDSASLIRVEDILVLRATLARVAAGEAMVIQSGDCAE 69
Query: 138 SFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPS 197
E +++ +L + Q PVV+VGR+AGQFAKPRS+ E V+LP
Sbjct: 70 DMDESTPDHVARKAAVLDILAGTFRLVTQQPVVRVGRIAGQFAKPRSNNNERIGDVELPV 129
Query: 198 YRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRVTQWNLDFTE 257
YRGD VNG R D QRL+R Y SAA D +
Sbjct: 130 YRGDMVNGREAVCGHRQHDAQRLVRGY--SAAR-----------------------DIMQ 164
Query: 258 HSEQGDRYRELAHRVDEALGFMSAAGLTVDHPIMTTTEFWTSHECLLLPYEQSLTRLDST 317
H LG+ ++A ++ + WT+HE L+L YE R D
Sbjct: 165 H-----------------LGWKASAS----QEQLSGSPAWTNHEMLVLDYELPQLRQDE- 202
Query: 318 SGLYYDCSAHFLWVGERTRQLDGAHVEFLKGVANPLGIKVSDKMDPNELVKLIEILNPQN 377
G + S H+ W+GERTRQL GAHV L V NP+ KV + ++L+ L E L+ +
Sbjct: 203 QGRVFLGSTHWPWIGERTRQLTGAHVTLLSEVLNPVACKVGPDITQDQLLSLCERLDAKR 262
Query: 378 KPGRITIITRMGAENMRVKLPHLIRAVRRSGQIVTWVSDPMHGNTIKAPCGLKTRPFDSI 437
+PGR+T+I RMGA+ + +LP L+ AVR++G + W+SDPMHGNTI APCG KTR +I
Sbjct: 263 EPGRLTLIARMGAQKVAERLPPLVEAVRQAGHKIIWLSDPMHGNTIVAPCGNKTRMVQAI 322
>sp|P55911|AROF_STRLI Phospho-2-dehydro-3-deoxyheptonate aldolase (Fragment)
OS=Streptomyces lividans PE=3 SV=1
Length = 146
Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 48/73 (65%), Gaps = 5/73 (6%)
Query: 367 VKLIEILNPQNKPGRITIITRMGAENMRVKLPHLIRAVRRS--GQIVTWVSDPMHGNTIK 424
++ IE L+P+ +PGR+T I RMGA+ +R KLP L V RS V W++DPMHGNT +
Sbjct: 1 LQYIERLDPEREPGRLTFIVRMGADKIRDKLPEL---VERSPPPATVAWITDPMHGNTYE 57
Query: 425 APCGLKTRPFDSI 437
A KTR FD +
Sbjct: 58 AAPVHKTRRFDDV 70
>sp|A7IB61|HELS_METB6 Putative ski2-type helicase OS=Methanoregula boonei (strain 6A8)
GN=Mboo_2458 PE=3 SV=1
Length = 723
Score = 40.4 bits (93), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 19/128 (14%)
Query: 167 MPVVKVGRMAGQFAKPRSDPFEE-----KNGVKLPSYRGDNVNGDAFDEKSRNPDPQRLI 221
+PV + +MAG+ +PR DP+ E K ++P + +A D SR +P
Sbjct: 360 IPVSEYRQMAGRAGRPRLDPYGEAVLIAKEAEQVPELFEVYIEAEAEDVHSRIAEP---- 415
Query: 222 RAYCQSAATLNLLRAFATGGYAAMQRVTQW-NLDFTEHSEQGDRYRELAHR-VDEALGFM 279
+A ++L A+G +T++ N F H + R L HR +DEAL F+
Sbjct: 416 -----TALYTHVLSLVASGFAGTRGELTEFMNRSFYVHEHKQGR---LIHRAIDEALQFL 467
Query: 280 SAAGLTVD 287
A + V+
Sbjct: 468 ITAEMVVE 475
>sp|A6V102|MLTF_PSEA7 Membrane-bound lytic murein transglycosylase F OS=Pseudomonas
aeruginosa (strain PA7) GN=mltF PE=3 SV=1
Length = 490
Score = 37.7 bits (86), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 16/113 (14%)
Query: 330 WVGERTRQLDGAHVEFLKGVANPLGIKVSDKMDPNELVKLIEILNPQNKPGRITIITRMG 389
W + GAH+E + +A G ++PN+ + + ++L P+ R TR G
Sbjct: 380 WFALAAYNIGGAHLEDARKMAEKEG------LNPNKWLDVKKML-PRLAQKRWYAKTRYG 432
Query: 390 AENMRVKLPHLIRAVRRSGQIVTWVSDP-MHGNTIKAPCGL------KTRPFD 435
+ H ++ VRR I+TWV+ P M G+ I A GL KTRP D
Sbjct: 433 YARGGETV-HFVQNVRRYYDILTWVTQPQMEGSQI-AESGLHLPGVNKTRPDD 483
>sp|A4IXW5|DXS_FRATW 1-deoxy-D-xylulose-5-phosphate synthase OS=Francisella tularensis
subsp. tularensis (strain WY96-3418) GN=dxs PE=3 SV=1
Length = 615
Score = 33.9 bits (76), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Query: 359 DKMDPNELVKLIEILNPQNKPGRITIITRMG-----AENMRVKLPHLIRAVRRSGQIVTW 413
D D ELVK + IL P + +IT+ G AE+ +K H+ + I T
Sbjct: 251 DGHDVTELVKTLRILKDHKGPKLLHVITKKGKGYTKAESDPIKFHHVAPSFHSGENITTK 310
Query: 414 VSDPMHGN 421
+S P + N
Sbjct: 311 ISKPTYSN 318
>sp|Q5NG39|DXS_FRATT 1-deoxy-D-xylulose-5-phosphate synthase OS=Francisella tularensis
subsp. tularensis (strain SCHU S4 / Schu 4) GN=dxs PE=3
SV=1
Length = 615
Score = 33.9 bits (76), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Query: 359 DKMDPNELVKLIEILNPQNKPGRITIITRMG-----AENMRVKLPHLIRAVRRSGQIVTW 413
D D ELVK + IL P + +IT+ G AE+ +K H+ + I T
Sbjct: 251 DGHDVTELVKTLRILKDHKGPKLLHVITKKGKGYTKAESDPIKFHHVAPSFHSGENITTK 310
Query: 414 VSDPMHGN 421
+S P + N
Sbjct: 311 ISKPTYSN 318
>sp|Q14HJ1|DXS_FRAT1 1-deoxy-D-xylulose-5-phosphate synthase OS=Francisella tularensis
subsp. tularensis (strain FSC 198) GN=dxs PE=3 SV=1
Length = 615
Score = 33.9 bits (76), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Query: 359 DKMDPNELVKLIEILNPQNKPGRITIITRMG-----AENMRVKLPHLIRAVRRSGQIVTW 413
D D ELVK + IL P + +IT+ G AE+ +K H+ + I T
Sbjct: 251 DGHDVTELVKTLRILKDHKGPKLLHVITKKGKGYTKAESDPIKFHHVAPSFHSGENITTK 310
Query: 414 VSDPMHGN 421
+S P + N
Sbjct: 311 ISKPTYSN 318
>sp|B2SGK5|DXS_FRATM 1-deoxy-D-xylulose-5-phosphate synthase OS=Francisella tularensis
subsp. mediasiatica (strain FSC147) GN=dxs PE=3 SV=1
Length = 615
Score = 33.9 bits (76), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Query: 359 DKMDPNELVKLIEILNPQNKPGRITIITRMG-----AENMRVKLPHLIRAVRRSGQIVTW 413
D D ELVK + IL P + +IT+ G AE+ +K H+ + I T
Sbjct: 251 DGHDVTELVKTLRILKDHKGPKLLHVITKKGKGYTKAESDPIKFHHVAPSFHSGENITTK 310
Query: 414 VSDPMHGN 421
+S P + N
Sbjct: 311 ISKPTYSN 318
>sp|Q0BLU9|DXS_FRATO 1-deoxy-D-xylulose-5-phosphate synthase OS=Francisella tularensis
subsp. holarctica (strain OSU18) GN=dxs PE=3 SV=1
Length = 615
Score = 33.9 bits (76), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Query: 359 DKMDPNELVKLIEILNPQNKPGRITIITRMG-----AENMRVKLPHLIRAVRRSGQIVTW 413
D D ELVK + IL P + +IT+ G AE+ +K H+ + I T
Sbjct: 251 DGHDVTELVKTLRILKDHKGPKLLHVITKKGKGYTKAESDPIKFHHVAPSFHSGENITTK 310
Query: 414 VSDPMHGN 421
+S P + N
Sbjct: 311 ISKPTYSN 318
>sp|Q2A3D3|DXS_FRATH 1-deoxy-D-xylulose-5-phosphate synthase OS=Francisella tularensis
subsp. holarctica (strain LVS) GN=dxs PE=3 SV=1
Length = 615
Score = 33.9 bits (76), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Query: 359 DKMDPNELVKLIEILNPQNKPGRITIITRMG-----AENMRVKLPHLIRAVRRSGQIVTW 413
D D ELVK + IL P + +IT+ G AE+ +K H+ + I T
Sbjct: 251 DGHDVTELVKTLRILKDHKGPKLLHVITKKGKGYTKAESDPIKFHHVAPSFHSGENITTK 310
Query: 414 VSDPMHGN 421
+S P + N
Sbjct: 311 ISKPTYSN 318
>sp|A7NCA4|DXS_FRATF 1-deoxy-D-xylulose-5-phosphate synthase OS=Francisella tularensis
subsp. holarctica (strain FTNF002-00 / FTA) GN=dxs PE=3
SV=1
Length = 615
Score = 33.9 bits (76), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Query: 359 DKMDPNELVKLIEILNPQNKPGRITIITRMG-----AENMRVKLPHLIRAVRRSGQIVTW 413
D D ELVK + IL P + +IT+ G AE+ +K H+ + I T
Sbjct: 251 DGHDVTELVKTLRILKDHKGPKLLHVITKKGKGYTKAESDPIKFHHVAPSFHSGENITTK 310
Query: 414 VSDPMHGN 421
+S P + N
Sbjct: 311 ISKPTYSN 318
>sp|P22548|NIFH4_CLOPA Nitrogenase iron protein 4 OS=Clostridium pasteurianum GN=nifH4
PE=3 SV=1
Length = 273
Score = 33.1 bits (74), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 16/22 (72%)
Query: 253 LDFTEHSEQGDRYRELAHRVDE 274
+DF SEQ D YRELA ++DE
Sbjct: 225 IDFDPKSEQADEYRELARKIDE 246
>sp|Q9UST5|RRN7_SCHPO RNA polymerase I-specific transcription initiation factor rrn7
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=rrn7 PE=1 SV=1
Length = 537
Score = 33.1 bits (74), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Query: 346 LKGVANPLGIKVSDKMD----PNELVKLIEIL-NPQNKPGRITIITRMGAENMRVKLPHL 400
L+ V P+GIK SDKMD + + ++ N +N R+TI M A+ +KL L
Sbjct: 462 LEQVFKPVGIKESDKMDFSRRKDAYISMLPFSPNTENTAHRVTI---MVAKLYNIKLDSL 518
Query: 401 IRAVR 405
I A+R
Sbjct: 519 IAAIR 523
>sp|A0Q6B9|DXS_FRATN 1-deoxy-D-xylulose-5-phosphate synthase OS=Francisella tularensis
subsp. novicida (strain U112) GN=dxs PE=3 SV=1
Length = 615
Score = 33.1 bits (74), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Query: 359 DKMDPNELVKLIEILNPQNKPGRITIITRMG-----AENMRVKLPHLIRAVRRSGQIVTW 413
D D ELVK + IL P + +IT+ G AE+ +K H+ + ++T
Sbjct: 251 DGHDVTELVKTLRILKDHKGPKLLHVITKKGKGYTKAESDPIKFHHVAPSFHSGENVITK 310
Query: 414 VSDPMHGN 421
S P + N
Sbjct: 311 ASKPTYSN 318
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 170,546,866
Number of Sequences: 539616
Number of extensions: 7256902
Number of successful extensions: 20206
Number of sequences better than 100.0: 41
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 20154
Number of HSP's gapped (non-prelim): 46
length of query: 443
length of database: 191,569,459
effective HSP length: 121
effective length of query: 322
effective length of database: 126,275,923
effective search space: 40660847206
effective search space used: 40660847206
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)