BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013452
(442 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O14197|YDQ4_SCHPO Uncharacterized transporter C5D6.04 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC5D6.04 PE=3 SV=1
Length = 452
Score = 82.4 bits (202), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 100/428 (23%), Positives = 186/428 (43%), Gaps = 50/428 (11%)
Query: 33 KVFTICFLGFLMASKYVNILPASGRKLLNGLVFTLLLPCLIFSQLGQAITLQKMIEWWFI 92
+V I G+++A K LP +K+++ L PCL+F ++G + L+ +I+ +
Sbjct: 25 EVIVIALGGYVLAKK--GFLPRDAQKVISSLNVYFFTPCLVFEKVGNGLNLKMLIDLSLL 82
Query: 93 PINVVLGTISGSLIGLVIAYIVRPPYPYFKFTIIHIGIGNIGNVPLVLIAALCRDPSN-- 150
P+ V+ + + LI ++A + R F I N ++PL L+++L +
Sbjct: 83 PVFYVIISAASILISFLLAKLFRLTPRQRNFATACITFQNSNSLPLALVSSLATTVKDLL 142
Query: 151 ----PFAEPETCSTQMTAYISFGQWVGAIILYTYVFHMLAPPPEGTFDIDEESLPIKNSS 206
P P+ +++ Y+ +G + ++Y + +L P + E+ LPI N S
Sbjct: 143 WDKIPDDTPDKVASRGIMYLLIFSQLGQALRWSYGYRILLSPNQ-----PEDPLPIGNRS 197
Query: 207 -KDATPAPEQIPLLTEEAEPKD--SNNPKRGKDATPATEQIPLLIEEAEPKDSKNPKRG- 262
+ E+I L + D N+ + + +T T+ + + ++ N + G
Sbjct: 198 WSHSDVNEEEIQNLLASSANVDGVQNSVQANEGSTVQTDSSAISKNDNVQVETSNEEVGG 257
Query: 263 ------KIAEVLIFIYEKLKLKQILQPPIIASILAMGIGAVPFLKKLIFTDDAPLFFFTD 316
KI++ ++ + + PP+ + +A+ I VP L++ F + + F +
Sbjct: 258 FGAASSKISKFIVLLLD------FFSPPLYSLFIALFIAVVPPLQRFFFEEGS----FVE 307
Query: 317 SCI-----ILGEAMIPCILLALGGNLVDG-----PGSAKLGFRTTAAII---FGRLVLVP 363
I + G+ +P IL+ LG +L P T II GR+V+VP
Sbjct: 308 GSITSGIRMAGQVAVPMILVVLGASLATDISKTEPTQEVRKNNDTRVIIVCLLGRMVVVP 367
Query: 364 PAGLGIVTLADKLGFIPA-GDKMFKFVLLLQHTMPTSVLSGAVSSLRGC-GREAAAVLFW 421
A L +L I D +F V+ L PT++ + L G RE A VL+W
Sbjct: 368 LALLPAFSLLSYFSEISTVDDPVFVVVIFLLVGSPTAIQLTQICQLNGVFERECAKVLWW 427
Query: 422 VHIFAVFS 429
+AVF+
Sbjct: 428 S--YAVFT 433
>sp|P38355|YB8B_YEAST Uncharacterized transporter YBR287W OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YBR287W PE=1 SV=1
Length = 427
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 169/405 (41%), Gaps = 36/405 (8%)
Query: 31 IAKVFTICFLGFLMASKYVNILPASGRKLLNGLVFTLLLPCLIFSQLGQAITLQKMIEWW 90
+ +V I GF AS +LP +K+++ L L PCLIFS+L +++++ K+ E
Sbjct: 18 VLQVVIIALAGFWSASS--GLLPKQSQKIISLLNVDLFTPCLIFSKLAKSLSMAKIFEIA 75
Query: 91 FIPINVVLGTISGSLIGLVIAYIVRPPYPYFKFTIIHIGIGNIGNVPLVLIAALCRDPSN 150
IPI L T + G +++ I+ F + + GN ++P+ L +L N
Sbjct: 76 IIPIFFGLTTGISFISGKIMSRILDLDKDETNFVVANSVFGNSNSLPVSLTLSLAYTLPN 135
Query: 151 ------PFAEPETCSTQMTAYISFGQWVGAIILYTYVFHMLAPPPEGTFDIDEESLPIKN 204
P + +++ Y+ Q +G ++ +++ ++ L +K
Sbjct: 136 LTWDQIPNDNRDNVASRGILYLLIFQQIGQMLRWSWGYNKL----------------MKW 179
Query: 205 SSKDATPA-PEQIPLLTEEAEPKDSNNPKRGKDATPATEQIPLLIEEAEPKDSKNPKRGK 263
S ++ P Q+ L E P N ++ S + K
Sbjct: 180 SGENTQHMPPSQVQSLLERT-PNIDNEELVNEEQEEQELLEEENNRMNSSFLSSSSIGDK 238
Query: 264 IAEVLIFIYEKLKLKQILQPPIIASILAMGIGAVPFLKKLIFTDDAPL-FFFTDSCIILG 322
I + ++E+++ L PP+ + I A+ + A+ L++ +F +D + F ++ LG
Sbjct: 239 IWQKSCTVFERIRAN--LNPPLYSMIFAVVVAAIGPLQRELFMEDGFINNTFAEAVTQLG 296
Query: 323 EAMIPCILLALGGNLVDG----PGSAKLGFRTTAAIIFGRLVLVPPAGLGIVTLADK-LG 377
IP IL+ LG NL P + +II GR++L L I+ +A K +
Sbjct: 297 SVSIPLILVVLGSNLYPSAEVFPKTVHHSKLLIGSII-GRMILPSCFLLPIIAIAVKYIN 355
Query: 378 FIPAGDKMFKFVLLLQHTMPTSVLSGAVSSLRGCGR-EAAAVLFW 421
D +F V L P ++ ++ L E A +LFW
Sbjct: 356 VSILDDPIFLVVGFLLTVSPPAIQLTQITQLNEFFEAEMADILFW 400
>sp|P54072|YL152_YEAST Uncharacterized transporter YLR152C OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YLR152C PE=1 SV=1
Length = 576
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 63/126 (50%), Gaps = 2/126 (1%)
Query: 19 SLLGTVKIAVLPIAKVFTICFLGFLMASKYVNILPASGRKLLNGLVFTLLLPCLIFSQLG 78
SL + IA+ PI K++TI +G+L+A +I+ K ++ +V +LPCL F+++
Sbjct: 4 SLGAAIYIALKPIFKIYTIMLVGYLVAK--FDIVSMENAKGISNMVVNAILPCLTFNKIV 61
Query: 79 QAITLQKMIEWWFIPINVVLGTISGSLIGLVIAYIVRPPYPYFKFTIIHIGIGNIGNVPL 138
I+ + + E I ++ + + G+ L + P +F I NI ++P+
Sbjct: 62 SNISWRDIKEIGVIILSAFILFVLGATGALFTTFATTVPKKFFWGLIFAGFFPNISDLPI 121
Query: 139 VLIAAL 144
I ++
Sbjct: 122 AYIQSM 127
>sp|Q99252|ECM3_YEAST Protein ECM3 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=ECM3 PE=1 SV=1
Length = 613
Score = 42.0 bits (97), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 65/141 (46%), Gaps = 23/141 (16%)
Query: 277 LKQILQPPIIASILAMGIGAVPFLKKLIFT-----------DDAP-LFFFTDSCIILGEA 324
LK L+P +A ILA+ I +P++K L T D+AP L F D +G A
Sbjct: 423 LKNCLRPCSMAVILALIIAFIPWVKALFVTTSNTPKIKQAPDNAPALTFIMDFTSYVGAA 482
Query: 325 MIPCILLALGGNLVDGPGSAKLG------FRTTAAIIFGRLVLVPPAGLGIVTLADKLGF 378
+P L+ LG L G K+G +++ ++F R ++P G+ K G+
Sbjct: 483 SVPFGLILLGATL----GRLKIGKLYPGFWKSAVVLVFLRQCIMPIFGVLWCDRLVKAGW 538
Query: 379 IP-AGDKMFKFVLLLQHTMPT 398
+ DKM FV + +PT
Sbjct: 539 LNWENDKMLLFVTAITWNLPT 559
Score = 35.8 bits (81), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 108/257 (42%), Gaps = 40/257 (15%)
Query: 27 AVLPIAKVFTICFLGFLMASKYVNILPASGRKLLNGLVFTLLLPCLIFSQLGQAITLQKM 86
+V PI K++ I +GF + +NIL + ++ +V T+LLPCL F+++ I +
Sbjct: 13 SVRPIIKIYLIIGVGFGLCK--MNILTVQATRSISDIVLTILLPCLSFNKIVANIEDNDI 70
Query: 87 IEWWFIPINVVLGTISGSLIGLVIAYIVRPPYP---YFKFTIIHIGI-GNIGNVPLVLIA 142
+ I + V+ + GL A+IVR P ++ I+ G+ NI ++P+ +
Sbjct: 71 KDVGIICLTSVILFAT----GLGFAFIVRSVLPVPKRWRGGILAGGMFPNISDLPIAYLQ 126
Query: 143 ALCRDPSNPFAEPETCSTQMTAYISFGQWVGAIILYTYVFHMLAPPPEGTFDIDEESLPI 202
++ D F E E + V +I++ +F ++ G F + E
Sbjct: 127 SM--DQGFIFTEAEG-----------EKGVANVIIFLAMF-LICVFNLGGFRLIENDFHY 172
Query: 203 KNSSKDATPAPEQIPLLTEEAEPKDSNNPKRGKDATPATEQIPLLIEEAEPKDSKNPKRG 262
K + LT + + P G ++ + + I EP +S P
Sbjct: 173 KGDDDEEN-------TLTNDDSAQQPTQPIEGNSSSSSNQDI-----LKEPNESTVPNSS 220
Query: 263 KIAEVLIFIYEKLKLKQ 279
+ + +I EK K ++
Sbjct: 221 QAS----YISEKNKKEK 233
>sp|P53932|YNJ5_YEAST Uncharacterized transporter YNL095C OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YNL095C PE=1 SV=1
Length = 642
Score = 41.2 bits (95), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 23/141 (16%)
Query: 277 LKQILQPPIIASILAMGIGAVPFLKKLIFT-----------DDA-PLFFFTDSCIILGEA 324
LK L+P +A I+A+ + +P++K L T D+A PL FF D +G A
Sbjct: 452 LKNCLRPCSMAVIIALTVAFIPWVKALFVTTANTPHISQAPDNAPPLSFFMDFTGYVGAA 511
Query: 325 MIPCILLALGGNLVDGPGSAKLG------FRTTAAIIFGRLVLVPPAGLGIVTLADKLGF 378
+P L+ LG L G K+G ++ ++ R ++P G+ K G+
Sbjct: 512 CVPFGLILLGATL----GRLKIGNLYPGFWKAAVTLVILRQCVMPIFGVLWCDRLVKAGW 567
Query: 379 IP-AGDKMFKFVLLLQHTMPT 398
+ D+M FV+ + +PT
Sbjct: 568 VNWQDDRMLLFVIAISWNLPT 588
Score = 39.7 bits (91), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 70/135 (51%), Gaps = 12/135 (8%)
Query: 26 IAVLPIAKVFTICFLGFLMASKYVNILPASGRKLLNGLVFTLLLPCLIFSQLGQAITLQK 85
++V PI K++ I +GFLMA + IL ++++ +V T+LLP L F+++ I +
Sbjct: 12 VSVKPIIKIYLIIGVGFLMAK--MGILTVEATRIISDIVLTVLLPSLSFNKIVANIEDKD 69
Query: 86 MIEWWFIPINVVLGTISGSLIGLVIAYIVR--PPYPYFKFTIIHIG--IGNIGNVPLVLI 141
+ I ++ +L I GS G AY+VR P P + I G NI ++P+ +
Sbjct: 70 IKSVGIICLSALL--IFGS--GFFFAYVVRLFLPVPKQWYGGILAGGMFPNISDLPIAYL 125
Query: 142 AALCRDPSNPFAEPE 156
++ D F+E E
Sbjct: 126 QSM--DQGLVFSEEE 138
>sp|P80544|PLS_STAAU Surface protein OS=Staphylococcus aureus GN=pls PE=1 SV=2
Length = 1637
Score = 37.0 bits (84), Expect = 0.30, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 32/79 (40%), Gaps = 5/79 (6%)
Query: 186 APPPEGTFDIDEESLPIKNSSKDAT----PAPEQIPLLTEEAEPKDSNNPKRGKDATPAT 241
AP EGT ++ E P + AT P E+ TEEA PK K + PA
Sbjct: 128 APKAEGTDKVETEEAPKAEETDKATTEEAPKAEETDKATEEA-PKTEETDKATTEEAPAA 186
Query: 242 EQIPLLIEEAEPKDSKNPK 260
E+ E PK + K
Sbjct: 187 EETSKAATEEAPKAEETSK 205
>sp|Q50EK0|C16B2_PICSI Cytochrome P450 716B2 OS=Picea sitchensis GN=CYP716B2 PE=2 SV=1
Length = 497
Score = 35.8 bits (81), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 1 MREFIGRMIMETQKAGGESLLGTVKIAVLPIAKVFTICFLGFLMASKYVNILPASGRKLL 60
+REF+GR+ T++ E +G ++ LP+ K +T L AS +N GR L
Sbjct: 160 LREFVGRVDSMTKRHLAEHWIGKDEVTALPLLKRYTFSLACDLFAS--INNKDDLGRLWL 217
Query: 61 NGLVF 65
+ +VF
Sbjct: 218 HFMVF 222
>sp|Q2EG98|PK1L3_MOUSE Polycystic kidney disease protein 1-like 3 OS=Mus musculus
GN=Pkd1l3 PE=2 SV=2
Length = 2201
Score = 35.0 bits (79), Expect = 1.3, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Query: 186 APPPEGTFDIDEESLPIKNSSKDATPAPEQIPLLTEEAEPKDSNNPKRGKDATPATEQIP 245
+ PP+GT D S P + +S TPA P T E SN+P +G TP P
Sbjct: 354 SSPPQGTLDTPSSSSPPQGTSD--TPASSSPPQGTSETPA--SNSPPQGTSETPGFSSPP 409
>sp|Q12473|FRE6_YEAST Ferric reductase transmembrane component 6 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=FRE6 PE=1
SV=1
Length = 712
Score = 34.3 bits (77), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 69/165 (41%), Gaps = 45/165 (27%)
Query: 43 LMASKYVN------ILP-------ASGRKLLNGLVFTLLLPCLIFSQLGQAITLQKMIEW 89
L AS++VN +LP A+ K LN VFT L+P +E
Sbjct: 200 LFASRFVNYIRGHFVLPTFLVDKHANHFKFLNVEVFTGLMP--------------NSLEA 245
Query: 90 WFIPINVVLGTISGSLIGLVIAYIVRPPYPYF-----KFTII---HIGIGNIGNVPLVLI 141
W ++ G ++I L I+YI+ P F +FT + GI PL++I
Sbjct: 246 W-----IIFGYTLANIIFLSISYIIDPYNLIFNSHLSQFTRLLADRSGILAFTQFPLIII 300
Query: 142 AALCRDPSNPFAEPETCSTQMTAYISFGQWVGAIILYTYVFHMLA 186
N F E T + ++ISF +W+G I++ H L+
Sbjct: 301 FT----ARNSFLEFLT-GVKFNSFISFHKWIGRIMVLNATIHSLS 340
>sp|Q06852|SLAP1_CLOTH Cell surface glycoprotein 1 OS=Clostridium thermocellum (strain ATCC
27405 / DSM 1237) GN=olpB PE=4 SV=2
Length = 2313
Score = 32.7 bits (73), Expect = 5.7, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 28/73 (38%), Gaps = 3/73 (4%)
Query: 187 PPPEGTFDIDEESLPIKNSSKDATPAPEQIPLLTEEAEPKDSNNPKRGKDATPATEQIPL 246
P P +E P + TP E IP T EP S+ P + TP+ E P
Sbjct: 1523 PTPSDEPTPSDEPTPSDEPTPSETPE-EPIPTDTPSDEPTPSDEPTPSDEPTPSDEPTP- 1580
Query: 247 LIEEAEPKDSKNP 259
+E P D P
Sbjct: 1581 -SDEPTPSDEPTP 1592
Score = 32.7 bits (73), Expect = 5.7, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 28/73 (38%), Gaps = 3/73 (4%)
Query: 187 PPPEGTFDIDEESLPIKNSSKDATPAPEQIPLLTEEAEPKDSNNPKRGKDATPATEQIPL 246
P P +E P + TP E IP T EP S+ P + TP+ E P
Sbjct: 1578 PTPSDEPTPSDEPTPSDEPTPSETPE-EPIPTDTPSDEPTPSDEPTPSDEPTPSDEPTP- 1635
Query: 247 LIEEAEPKDSKNP 259
+E P D P
Sbjct: 1636 -SDEPTPSDEPTP 1647
Score = 32.7 bits (73), Expect = 5.7, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 28/73 (38%), Gaps = 3/73 (4%)
Query: 187 PPPEGTFDIDEESLPIKNSSKDATPAPEQIPLLTEEAEPKDSNNPKRGKDATPATEQIPL 246
P P +E P + TP E IP T EP S+ P + TP+ E P
Sbjct: 1891 PTPSDEPTPSDEPTPSDEPTPSETPE-EPIPTDTPSDEPTPSDEPTPSDEPTPSDEPTP- 1948
Query: 247 LIEEAEPKDSKNP 259
+E P D P
Sbjct: 1949 -SDEPTPSDEPTP 1960
Score = 32.7 bits (73), Expect = 5.7, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 28/73 (38%), Gaps = 3/73 (4%)
Query: 187 PPPEGTFDIDEESLPIKNSSKDATPAPEQIPLLTEEAEPKDSNNPKRGKDATPATEQIPL 246
P P +E P + TP E IP T EP S+ P + TP+ E P
Sbjct: 1946 PTPSDEPTPSDEPTPSDEPTPSETPE-EPIPTDTPSDEPTPSDEPTPSDEPTPSDEPTP- 2003
Query: 247 LIEEAEPKDSKNP 259
+E P D P
Sbjct: 2004 -SDEPTPSDEPTP 2015
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.143 0.433
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 168,516,931
Number of Sequences: 539616
Number of extensions: 7488876
Number of successful extensions: 23718
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 23551
Number of HSP's gapped (non-prelim): 175
length of query: 442
length of database: 191,569,459
effective HSP length: 121
effective length of query: 321
effective length of database: 126,275,923
effective search space: 40534571283
effective search space used: 40534571283
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 63 (28.9 bits)