Query 013453
Match_columns 442
No_of_seqs 436 out of 1340
Neff 11.2
Searched_HMMs 46136
Date Fri Mar 29 04:00:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013453.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013453hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2814 AraJ Arabinose efflux 100.0 1.5E-35 3.3E-40 262.7 31.7 347 37-441 9-357 (394)
2 TIGR02332 HpaX 4-hydroxyphenyl 100.0 6.4E-35 1.4E-39 272.9 32.9 377 38-442 5-392 (412)
3 PRK14995 methyl viologen resis 100.0 1E-34 2.2E-39 277.9 34.2 371 40-441 5-409 (495)
4 TIGR00903 2A0129 major facilit 100.0 2.7E-35 5.9E-40 269.6 27.5 332 55-440 5-337 (368)
5 TIGR01299 synapt_SV2 synaptic 100.0 3.8E-35 8.3E-40 285.5 30.1 377 45-441 171-706 (742)
6 COG2271 UhpC Sugar phosphate p 100.0 1.9E-35 4.1E-40 258.1 24.2 366 39-441 27-405 (448)
7 PRK09556 uhpT sugar phosphate 100.0 4.3E-35 9.4E-40 279.0 26.4 369 44-442 32-409 (467)
8 TIGR00891 2A0112 putative sial 100.0 4E-34 8.7E-39 268.9 30.3 374 37-442 8-387 (405)
9 PRK11663 regulatory protein Uh 100.0 5.3E-34 1.2E-38 269.0 30.5 365 42-441 24-395 (434)
10 TIGR00893 2A0114 d-galactonate 100.0 3.9E-34 8.5E-39 268.2 29.5 361 51-442 4-370 (399)
11 TIGR00900 2A0121 H+ Antiporter 100.0 4.5E-34 9.8E-39 264.6 29.1 349 46-441 4-359 (365)
12 PRK03545 putative arabinose tr 100.0 1.1E-33 2.5E-38 263.6 31.0 342 40-441 8-351 (390)
13 KOG2615 Permease of the major 100.0 1.2E-34 2.6E-39 248.3 21.5 364 58-442 42-411 (451)
14 PRK11551 putative 3-hydroxyphe 100.0 2.5E-33 5.4E-38 263.2 31.9 351 38-442 12-367 (406)
15 TIGR00711 efflux_EmrB drug res 100.0 2.1E-33 4.6E-38 270.1 31.8 370 42-441 3-406 (485)
16 PRK12307 putative sialic acid 100.0 1E-33 2.2E-38 267.5 29.1 360 39-441 16-379 (426)
17 PRK10406 alpha-ketoglutarate t 100.0 3.2E-33 7E-38 263.6 32.2 358 41-439 22-393 (432)
18 PRK10642 proline/glycine betai 100.0 5.3E-33 1.1E-37 266.0 31.1 373 41-441 16-400 (490)
19 PRK10213 nepI ribonucleoside t 100.0 2.7E-32 5.9E-37 253.7 33.6 343 39-442 18-363 (394)
20 TIGR00890 2A0111 Oxalate/Forma 100.0 4.4E-33 9.5E-38 259.2 27.6 337 53-441 15-353 (377)
21 TIGR00881 2A0104 phosphoglycer 100.0 2E-33 4.4E-38 261.6 25.2 362 49-441 3-368 (379)
22 PF07690 MFS_1: Major Facilita 100.0 1.6E-32 3.5E-37 252.9 28.7 346 47-436 2-352 (352)
23 TIGR00710 efflux_Bcr_CflA drug 100.0 9.8E-32 2.1E-36 250.8 33.4 349 41-439 5-355 (385)
24 PRK10504 putative transporter; 100.0 8.9E-32 1.9E-36 257.4 33.4 370 40-441 9-411 (471)
25 PRK09705 cynX putative cyanate 100.0 8.9E-32 1.9E-36 250.5 32.2 325 58-442 26-352 (393)
26 PRK09952 shikimate transporter 100.0 9.1E-32 2E-36 253.7 32.6 367 40-441 21-402 (438)
27 PRK10133 L-fucose transporter; 100.0 6.2E-32 1.3E-36 253.9 30.5 362 40-441 25-403 (438)
28 TIGR00887 2A0109 phosphate:H+ 100.0 3E-32 6.6E-37 261.7 26.7 385 41-441 16-450 (502)
29 PRK10091 MFS transport protein 100.0 2.6E-31 5.5E-36 246.9 31.6 341 41-441 3-346 (382)
30 TIGR00895 2A0115 benzoate tran 100.0 1.5E-31 3.2E-36 250.8 30.3 368 40-442 16-397 (398)
31 PRK15402 multidrug efflux syst 100.0 4.5E-31 9.7E-36 247.6 32.5 349 45-442 17-367 (406)
32 PRK10077 xylE D-xylose transpo 100.0 9.2E-32 2E-36 258.2 28.3 376 41-439 12-420 (479)
33 TIGR00879 SP MFS transporter, 100.0 4.5E-32 9.8E-37 260.7 26.1 366 47-441 34-441 (481)
34 PRK03633 putative MFS family t 100.0 7.2E-31 1.6E-35 243.9 32.0 338 40-441 5-343 (381)
35 TIGR00892 2A0113 monocarboxyla 100.0 9.8E-31 2.1E-35 247.6 32.9 368 39-442 17-392 (455)
36 PRK15075 citrate-proton sympor 100.0 5.4E-31 1.2E-35 248.7 30.7 359 40-441 14-390 (434)
37 PRK05122 major facilitator sup 100.0 1.1E-30 2.3E-35 244.7 32.2 339 38-441 12-360 (399)
38 PRK11195 lysophospholipid tran 100.0 4.2E-31 9E-36 245.7 28.9 346 42-440 4-351 (393)
39 TIGR00898 2A0119 cation transp 100.0 1.1E-31 2.3E-36 259.2 25.5 340 62-440 110-467 (505)
40 PRK03699 putative transporter; 100.0 1.5E-30 3.2E-35 242.8 31.8 345 40-441 6-351 (394)
41 PLN00028 nitrate transmembrane 100.0 8.8E-31 1.9E-35 249.2 30.1 360 40-439 35-403 (476)
42 TIGR00894 2A0114euk Na(+)-depe 100.0 7.9E-31 1.7E-35 250.2 29.9 370 39-442 17-419 (465)
43 PRK10489 enterobactin exporter 100.0 4.4E-31 9.6E-36 248.5 27.7 347 43-442 19-371 (417)
44 PRK15403 multidrug efflux syst 100.0 2.7E-30 5.9E-35 241.7 32.8 347 46-441 21-369 (413)
45 PRK12382 putative transporter; 100.0 1.9E-30 4.2E-35 242.3 31.7 337 40-441 14-360 (392)
46 PRK15034 nitrate/nitrite trans 100.0 1.3E-30 2.9E-35 239.9 29.8 362 37-440 30-423 (462)
47 PRK11043 putative transporter; 100.0 4.3E-30 9.3E-35 240.7 33.6 345 43-441 8-353 (401)
48 KOG1330 Sugar transporter/spin 100.0 2.1E-32 4.4E-37 241.4 15.7 372 34-442 26-409 (493)
49 PRK11273 glpT sn-glycerol-3-ph 100.0 9E-31 1.9E-35 248.4 28.0 359 48-441 36-406 (452)
50 PRK03893 putative sialic acid 100.0 8.2E-31 1.8E-35 252.6 28.2 372 38-441 17-424 (496)
51 PRK11646 multidrug resistance 100.0 5.5E-30 1.2E-34 238.7 32.3 341 44-442 13-356 (400)
52 PRK11652 emrD multidrug resist 100.0 8.5E-30 1.8E-34 238.1 32.9 349 39-441 6-356 (394)
53 TIGR00897 2A0118 polyol permea 100.0 8.4E-30 1.8E-34 238.3 32.1 355 39-441 11-372 (402)
54 KOG0569 Permease of the major 100.0 8.5E-30 1.8E-34 233.2 29.8 353 68-436 46-421 (485)
55 TIGR00886 2A0108 nitrite extru 100.0 2.2E-30 4.7E-35 240.0 26.2 357 43-431 3-365 (366)
56 PRK11102 bicyclomycin/multidru 100.0 1.6E-29 3.4E-34 235.1 30.9 336 55-439 5-343 (377)
57 TIGR00899 2A0120 sugar efflux 100.0 3.1E-29 6.7E-34 233.1 31.9 336 48-441 4-345 (375)
58 TIGR00712 glpT glycerol-3-phos 100.0 3.2E-30 6.9E-35 243.7 25.3 366 44-441 30-404 (438)
59 PRK09874 drug efflux system pr 100.0 1.5E-29 3.4E-34 237.8 29.7 354 41-441 14-369 (408)
60 PRK10054 putative transporter; 100.0 1.4E-29 3.1E-34 235.5 27.9 346 41-441 7-355 (395)
61 TIGR00885 fucP L-fucose:H+ sym 100.0 4.4E-29 9.5E-34 232.6 30.8 360 42-441 4-377 (410)
62 TIGR00902 2A0127 phenyl propri 100.0 9.3E-29 2E-33 229.6 32.7 340 44-442 7-352 (382)
63 PRK10473 multidrug efflux syst 100.0 1.8E-28 3.9E-33 229.0 33.0 281 45-374 7-289 (392)
64 TIGR00883 2A0106 metabolite-pr 100.0 2.6E-29 5.7E-34 235.2 25.8 349 51-441 3-371 (394)
65 TIGR00896 CynX cyanate transpo 100.0 1.6E-28 3.5E-33 226.2 30.3 328 55-441 14-344 (355)
66 cd06174 MFS The Major Facilita 100.0 1.8E-28 3.9E-33 225.9 29.9 319 45-441 3-323 (352)
67 KOG2532 Permease of the major 100.0 3.7E-29 8E-34 232.1 23.8 338 69-442 66-416 (466)
68 COG2223 NarK Nitrate/nitrite t 100.0 3.8E-29 8.3E-34 219.3 19.8 356 37-440 10-370 (417)
69 PRK11128 putative 3-phenylprop 100.0 2.6E-27 5.7E-32 220.0 31.3 334 50-442 13-352 (382)
70 PRK11010 ampG muropeptide tran 100.0 4.3E-27 9.3E-32 224.3 32.4 353 40-441 11-374 (491)
71 TIGR00901 2A0125 AmpG-related 100.0 7.7E-27 1.7E-31 215.2 31.0 331 57-429 4-355 (356)
72 PRK15011 sugar efflux transpor 100.0 2.3E-26 4.9E-31 214.5 33.8 339 43-441 17-362 (393)
73 PF05977 MFS_3: Transmembrane 100.0 3E-27 6.4E-32 223.3 28.0 353 38-441 7-365 (524)
74 KOG3764 Vesicular amine transp 100.0 8.2E-29 1.8E-33 213.9 14.5 354 43-442 23-426 (464)
75 KOG0254 Predicted transporter 100.0 7.5E-27 1.6E-31 224.4 28.4 359 57-434 63-446 (513)
76 PRK08633 2-acyl-glycerophospho 100.0 4.7E-27 1E-31 248.6 28.5 363 41-440 9-379 (1146)
77 KOG2533 Permease of the major 100.0 4E-27 8.7E-32 218.8 24.2 345 64-437 69-422 (495)
78 TIGR00889 2A0110 nucleoside tr 100.0 3.8E-26 8.3E-31 213.7 29.7 348 45-441 6-367 (418)
79 PRK06814 acylglycerophosphoeth 100.0 1E-26 2.3E-31 245.0 28.1 320 84-441 54-392 (1140)
80 TIGR00924 yjdL_sub1_fam amino 100.0 1.5E-25 3.3E-30 212.5 33.0 377 41-440 10-438 (475)
81 PRK11902 ampG muropeptide tran 100.0 2E-25 4.3E-30 208.9 31.9 342 47-440 5-360 (402)
82 TIGR00805 oat sodium-independe 100.0 2.4E-27 5.2E-32 230.8 18.8 311 45-370 37-415 (633)
83 PRK10207 dipeptide/tripeptide 100.0 2.4E-25 5.2E-30 211.2 31.3 376 39-439 12-435 (489)
84 TIGR00882 2A0105 oligosacchari 100.0 1E-25 2.2E-30 210.6 27.5 353 42-442 3-367 (396)
85 KOG0253 Synaptic vesicle trans 99.9 5.6E-26 1.2E-30 194.1 22.0 369 40-439 77-490 (528)
86 PRK09528 lacY galactoside perm 99.9 5.6E-26 1.2E-30 214.0 24.4 355 41-442 10-375 (420)
87 PF06609 TRI12: Fungal trichot 99.9 1E-24 2.2E-29 205.1 32.4 354 53-439 56-461 (599)
88 COG0738 FucP Fucose permease [ 99.9 1.7E-25 3.6E-30 195.0 24.0 360 40-442 12-381 (422)
89 KOG0252 Inorganic phosphate tr 99.9 3.6E-28 7.8E-33 213.8 5.7 391 43-441 43-464 (538)
90 KOG2504 Monocarboxylate transp 99.9 4.6E-24 9.9E-29 200.7 30.8 363 44-442 49-447 (509)
91 TIGR02718 sider_RhtX_FptX side 99.9 1.1E-23 2.4E-28 196.5 33.0 348 43-441 3-362 (390)
92 TIGR00792 gph sugar (Glycoside 99.9 2.1E-24 4.5E-29 204.9 25.0 339 58-441 16-376 (437)
93 KOG0255 Synaptic vesicle trans 99.9 5.4E-24 1.2E-28 205.9 27.2 334 68-439 110-462 (521)
94 COG2807 CynX Cyanate permease 99.9 9.3E-23 2E-27 175.2 31.2 328 56-442 27-356 (395)
95 PF00083 Sugar_tr: Sugar (and 99.9 7.9E-30 1.7E-34 242.8 -15.6 375 48-440 7-406 (451)
96 TIGR00806 rfc RFC reduced fola 99.9 1.4E-22 3.1E-27 183.2 26.6 177 45-241 31-207 (511)
97 PRK09584 tppB putative tripept 99.9 7.5E-22 1.6E-26 188.5 32.3 372 41-437 21-436 (500)
98 PF03825 Nuc_H_symport: Nucleo 99.9 6.4E-21 1.4E-25 175.3 31.5 350 45-442 6-361 (400)
99 TIGR01301 GPH_sucrose GPH fami 99.9 5.9E-21 1.3E-25 177.6 29.6 378 39-440 2-439 (477)
100 PRK15462 dipeptide/tripeptide 99.9 2E-20 4.4E-25 174.7 32.7 374 40-438 8-433 (493)
101 PRK09669 putative symporter Ya 99.9 6.2E-20 1.3E-24 174.0 28.5 356 39-441 7-384 (444)
102 KOG4686 Predicted sugar transp 99.9 2E-22 4.4E-27 166.3 9.9 357 44-442 47-411 (459)
103 TIGR00788 fbt folate/biopterin 99.9 7E-21 1.5E-25 180.2 19.4 367 41-441 26-409 (468)
104 PTZ00207 hypothetical protein; 99.9 1.9E-19 4.2E-24 170.9 27.5 128 58-193 44-179 (591)
105 PRK10429 melibiose:sodium symp 99.9 1.3E-19 2.7E-24 173.0 26.3 362 41-441 6-389 (473)
106 PRK09848 glucuronide transport 99.8 1.4E-18 2.9E-23 165.1 29.2 351 39-441 6-384 (448)
107 PF13347 MFS_2: MFS/sugar tran 99.8 1.4E-19 3.1E-24 170.7 20.0 335 62-441 23-380 (428)
108 PF01306 LacY_symp: LacY proto 99.8 9.7E-19 2.1E-23 157.7 23.3 353 41-441 7-371 (412)
109 TIGR01272 gluP glucose/galacto 99.8 1.6E-18 3.5E-23 155.2 23.3 277 131-441 6-286 (310)
110 KOG2325 Predicted transporter/ 99.8 1.7E-19 3.8E-24 164.3 16.5 202 33-245 26-238 (488)
111 PF11700 ATG22: Vacuole efflux 99.8 2.6E-17 5.5E-22 154.4 29.5 333 81-441 69-438 (477)
112 PRK11462 putative transporter; 99.8 9.6E-17 2.1E-21 152.1 29.7 355 39-441 7-383 (460)
113 COG3104 PTR2 Dipeptide/tripept 99.8 2.5E-16 5.4E-21 142.3 30.6 377 41-440 21-451 (498)
114 KOG2816 Predicted transporter 99.8 2.4E-17 5.1E-22 152.8 23.3 356 46-440 27-387 (463)
115 COG2211 MelB Na+/melibiose sym 99.8 1.2E-16 2.7E-21 145.6 26.4 363 37-441 8-392 (467)
116 KOG2563 Permease of the major 99.8 2.5E-17 5.5E-22 146.0 18.4 354 45-436 49-412 (480)
117 PF03209 PUCC: PUCC protein; 99.8 1.1E-15 2.4E-20 135.5 27.4 329 67-441 6-359 (403)
118 PF03137 OATP: Organic Anion T 99.8 5.8E-20 1.3E-24 174.5 -0.3 386 45-442 7-511 (539)
119 COG2270 Permeases of the major 99.7 1.1E-15 2.4E-20 135.1 21.5 334 81-441 57-399 (438)
120 PF05631 DUF791: Protein of un 99.7 5.9E-14 1.3E-18 122.6 24.9 272 50-367 43-322 (354)
121 KOG3626 Organic anion transpor 99.7 1.5E-15 3.3E-20 144.4 16.2 313 45-369 101-476 (735)
122 PRK10642 proline/glycine betai 99.6 1.1E-14 2.4E-19 139.8 19.3 174 51-245 260-438 (490)
123 TIGR00889 2A0110 nucleoside tr 99.6 4.4E-15 9.6E-20 139.3 15.7 183 50-242 217-408 (418)
124 TIGR01299 synapt_SV2 synaptic 99.6 6.8E-15 1.5E-19 144.5 16.8 140 85-241 598-738 (742)
125 PRK15011 sugar efflux transpor 99.6 5.2E-14 1.1E-18 131.4 18.1 158 58-238 233-392 (393)
126 TIGR00880 2_A_01_02 Multidrug 99.6 9.3E-15 2E-19 115.4 10.1 135 88-238 4-140 (141)
127 PRK05122 major facilitator sup 99.6 7.3E-14 1.6E-18 131.0 17.0 161 56-240 231-392 (399)
128 PRK11551 putative 3-hydroxyphe 99.6 6.4E-14 1.4E-18 131.7 16.0 141 49-195 228-369 (406)
129 PRK09528 lacY galactoside perm 99.6 2.2E-14 4.7E-19 135.3 12.2 140 84-239 264-406 (420)
130 TIGR00890 2A0111 Oxalate/Forma 99.6 4E-14 8.6E-19 131.7 13.6 144 46-195 210-356 (377)
131 TIGR00902 2A0127 phenyl propri 99.6 1.3E-13 2.8E-18 128.3 16.3 148 41-195 205-354 (382)
132 cd06174 MFS The Major Facilita 99.5 2.3E-13 5E-18 125.2 16.2 164 50-235 184-350 (352)
133 TIGR00899 2A0120 sugar efflux 99.5 3.5E-13 7.5E-18 125.4 17.3 155 61-238 219-375 (375)
134 PRK09874 drug efflux system pr 99.5 3.6E-13 7.8E-18 126.8 16.6 161 56-234 234-395 (408)
135 PRK10489 enterobactin exporter 99.5 2.5E-13 5.4E-18 128.1 15.4 161 60-242 242-405 (417)
136 TIGR00892 2A0113 monocarboxyla 99.5 7.7E-14 1.7E-18 132.5 11.4 148 42-195 242-394 (455)
137 PRK09705 cynX putative cyanate 99.5 1.3E-12 2.7E-17 122.1 18.9 177 43-242 207-387 (393)
138 PRK12382 putative transporter; 99.5 7.2E-13 1.6E-17 123.9 16.8 154 56-233 231-385 (392)
139 PRK03633 putative MFS family t 99.5 8.8E-13 1.9E-17 122.7 16.8 154 57-235 216-370 (381)
140 TIGR00897 2A0118 polyol permea 99.5 7.1E-13 1.5E-17 124.2 15.7 171 43-236 224-400 (402)
141 PRK03699 putative transporter; 99.5 1.1E-12 2.4E-17 122.6 16.4 147 42-195 206-354 (394)
142 PRK03893 putative sialic acid 99.5 1.8E-12 3.8E-17 125.3 16.4 130 60-195 294-427 (496)
143 TIGR00893 2A0114 d-galactonate 99.5 2E-12 4.3E-17 121.1 16.2 148 41-195 215-372 (399)
144 PRK03545 putative arabinose tr 99.4 3.9E-12 8.5E-17 118.8 17.0 145 65-233 230-376 (390)
145 TIGR00883 2A0106 metabolite-pr 99.4 8.8E-13 1.9E-17 123.4 12.1 147 43-195 221-374 (394)
146 PRK11128 putative 3-phenylprop 99.4 4.9E-12 1.1E-16 117.7 16.3 146 43-195 207-354 (382)
147 PRK09556 uhpT sugar phosphate 99.4 4.2E-12 9E-17 121.4 16.1 148 42-195 259-411 (467)
148 PF01770 Folate_carrier: Reduc 99.4 1.1E-09 2.3E-14 99.0 28.1 342 65-436 28-393 (412)
149 PF06963 FPN1: Ferroportin1 (F 99.4 6.2E-09 1.4E-13 95.9 33.6 363 42-434 3-407 (432)
150 PF03092 BT1: BT1 family; Int 99.4 6.8E-12 1.5E-16 117.6 14.2 347 61-440 10-375 (433)
151 PRK09952 shikimate transporter 99.4 2.7E-11 5.8E-16 114.8 18.2 166 53-238 262-434 (438)
152 TIGR00895 2A0115 benzoate tran 99.4 5E-12 1.1E-16 118.5 12.8 143 45-193 254-397 (398)
153 PF11700 ATG22: Vacuole efflux 99.4 2.8E-11 6E-16 114.0 17.3 179 41-240 281-471 (477)
154 TIGR00879 SP MFS transporter, 99.4 1.5E-11 3.3E-16 118.3 16.1 172 47-240 290-474 (481)
155 PRK11273 glpT sn-glycerol-3-ph 99.4 1.1E-11 2.4E-16 118.0 14.8 170 43-234 255-432 (452)
156 PRK10504 putative transporter; 99.4 1.8E-11 3.8E-16 117.5 15.9 148 42-195 262-414 (471)
157 TIGR00900 2A0121 H+ Antiporter 99.4 5E-12 1.1E-16 117.0 11.6 128 62-195 232-362 (365)
158 PRK11663 regulatory protein Uh 99.4 2.7E-11 5.9E-16 114.6 16.7 169 43-234 245-421 (434)
159 PRK12307 putative sialic acid 99.4 1.3E-11 2.9E-16 116.8 14.1 130 60-195 250-382 (426)
160 PF05977 MFS_3: Transmembrane 99.3 4.3E-11 9.3E-16 114.0 17.2 136 54-195 231-368 (524)
161 COG2814 AraJ Arabinose efflux 99.3 5.1E-11 1.1E-15 106.9 16.5 172 40-235 210-384 (394)
162 TIGR00891 2A0112 putative sial 99.3 1.1E-11 2.4E-16 116.6 12.8 130 60-195 257-389 (405)
163 TIGR00882 2A0105 oligosacchari 99.3 2.7E-11 5.9E-16 113.4 14.9 131 84-230 256-388 (396)
164 TIGR00887 2A0109 phosphate:H+ 99.3 2E-11 4.4E-16 117.7 13.9 178 58-241 305-493 (502)
165 PRK10054 putative transporter; 99.3 6E-11 1.3E-15 110.8 14.0 111 84-195 246-358 (395)
166 PRK11010 ampG muropeptide tran 99.3 1.2E-09 2.7E-14 104.7 23.2 153 65-239 247-405 (491)
167 TIGR02718 sider_RhtX_FptX side 99.3 6.6E-11 1.4E-15 110.6 14.2 160 50-231 217-385 (390)
168 PRK15402 multidrug efflux syst 99.3 1.1E-10 2.3E-15 109.8 15.3 127 62-195 236-369 (406)
169 COG2270 Permeases of the major 99.3 1.5E-10 3.2E-15 103.0 14.8 177 42-239 253-431 (438)
170 PRK15075 citrate-proton sympor 99.3 2E-10 4.4E-15 108.8 16.8 137 53-195 250-393 (434)
171 TIGR00792 gph sugar (Glycoside 99.3 2.8E-11 6E-16 115.1 10.3 148 42-195 223-379 (437)
172 PLN00028 nitrate transmembrane 99.2 1.3E-10 2.9E-15 111.1 14.8 153 61-237 272-433 (476)
173 TIGR00712 glpT glycerol-3-phos 99.2 1.8E-10 3.9E-15 109.2 15.6 176 43-240 253-437 (438)
174 TIGR00898 2A0119 cation transp 99.2 1.8E-10 3.9E-15 111.6 15.2 136 88-241 361-499 (505)
175 PRK10077 xylE D-xylose transpo 99.2 3.1E-10 6.6E-15 109.3 16.6 168 57-240 287-461 (479)
176 COG2271 UhpC Sugar phosphate p 99.2 1.6E-10 3.5E-15 102.7 13.1 158 40-210 251-416 (448)
177 PRK10406 alpha-ketoglutarate t 99.2 5.3E-10 1.1E-14 105.9 17.7 134 55-194 257-397 (432)
178 TIGR00881 2A0104 phosphoglycer 99.2 9.9E-11 2.1E-15 108.9 12.1 154 43-209 218-378 (379)
179 KOG0569 Permease of the major 99.2 3.7E-10 8E-15 104.7 15.3 172 49-243 278-461 (485)
180 TIGR00896 CynX cyanate transpo 99.2 3.7E-10 8.1E-15 104.1 15.3 141 49-196 205-348 (355)
181 PRK10213 nepI ribonucleoside t 99.2 6.8E-10 1.5E-14 103.6 17.1 124 64-195 240-365 (394)
182 PF03825 Nuc_H_symport: Nucleo 99.2 5.2E-10 1.1E-14 103.4 15.7 182 42-239 208-398 (400)
183 PRK11646 multidrug resistance 99.2 2.2E-10 4.8E-15 107.2 13.4 129 62-196 229-359 (400)
184 KOG2504 Monocarboxylate transp 99.2 1.9E-10 4.1E-15 109.1 13.0 175 42-237 299-476 (509)
185 KOG0253 Synaptic vesicle trans 99.2 5.1E-11 1.1E-15 103.3 8.1 125 93-238 392-520 (528)
186 PF02487 CLN3: CLN3 protein; 99.2 3.4E-08 7.5E-13 89.4 26.5 325 84-438 61-390 (402)
187 PF06813 Nodulin-like: Nodulin 99.2 1.4E-09 3E-14 92.5 16.3 132 56-195 17-156 (250)
188 PRK10091 MFS transport protein 99.2 8.3E-10 1.8E-14 102.8 15.5 123 65-195 224-349 (382)
189 TIGR01272 gluP glucose/galacto 99.2 1.3E-09 2.8E-14 97.8 15.9 145 42-195 141-289 (310)
190 TIGR00711 efflux_EmrB drug res 99.1 6.5E-10 1.4E-14 107.2 13.3 147 43-195 257-409 (485)
191 PF01306 LacY_symp: LacY proto 99.1 2.5E-09 5.5E-14 97.2 15.4 183 41-241 220-405 (412)
192 TIGR00901 2A0125 AmpG-related 99.1 7.2E-10 1.6E-14 102.3 12.2 132 43-180 211-355 (356)
193 PRK11902 ampG muropeptide tran 99.1 1.5E-09 3.2E-14 101.9 14.4 148 65-238 234-391 (402)
194 PF07690 MFS_1: Major Facilita 99.1 6.1E-10 1.3E-14 102.5 10.5 136 46-187 211-352 (352)
195 TIGR02332 HpaX 4-hydroxyphenyl 99.1 2E-09 4.3E-14 101.2 14.0 146 44-195 245-394 (412)
196 PRK08633 2-acyl-glycerophospho 99.1 2.9E-09 6.2E-14 113.8 15.9 132 58-195 249-383 (1146)
197 PF13347 MFS_2: MFS/sugar tran 99.1 3.2E-09 7E-14 100.4 14.6 149 41-195 225-383 (428)
198 TIGR00894 2A0114euk Na(+)-depe 99.1 2.5E-09 5.4E-14 102.4 13.9 177 41-237 261-450 (465)
199 COG2223 NarK Nitrate/nitrite t 99.1 2.2E-09 4.8E-14 95.6 12.2 169 40-233 217-397 (417)
200 PRK14995 methyl viologen resis 99.1 2.5E-09 5.5E-14 103.0 13.6 142 48-195 266-412 (495)
201 TIGR00710 efflux_Bcr_CflA drug 99.0 3.6E-09 7.7E-14 98.8 14.2 123 61-190 226-356 (385)
202 TIGR00926 2A1704 Peptide:H+ sy 99.0 1.3E-07 2.8E-12 92.5 25.2 157 62-233 9-178 (654)
203 KOG3574 Acetyl-CoA transporter 99.0 2.2E-08 4.7E-13 87.5 17.5 364 37-435 27-421 (510)
204 PRK06814 acylglycerophosphoeth 99.0 3.9E-09 8.4E-14 112.4 15.5 147 43-195 227-395 (1140)
205 KOG0637 Sucrose transporter an 99.0 1.3E-08 2.7E-13 91.5 16.0 147 41-193 32-202 (498)
206 KOG4686 Predicted sugar transp 99.0 8.6E-09 1.9E-13 86.5 13.8 123 66-196 290-414 (459)
207 PRK10473 multidrug efflux syst 99.0 5.6E-09 1.2E-13 97.7 14.6 119 67-195 230-348 (392)
208 PRK09848 glucuronide transport 99.0 1.8E-09 3.8E-14 102.9 11.0 147 43-195 230-387 (448)
209 PRK11195 lysophospholipid tran 99.0 1.4E-08 2.9E-13 94.9 16.7 122 66-194 231-354 (393)
210 KOG3098 Uncharacterized conser 99.0 1.7E-07 3.7E-12 86.4 22.6 326 88-435 56-404 (461)
211 PRK11043 putative transporter; 99.0 1.1E-08 2.3E-13 96.1 15.2 129 60-195 222-356 (401)
212 TIGR00903 2A0129 major facilit 99.0 2.1E-08 4.6E-13 92.4 16.6 144 41-194 192-340 (368)
213 TIGR00769 AAA ADP/ATP carrier 99.0 7E-07 1.5E-11 83.5 26.5 288 40-361 6-340 (472)
214 PRK10133 L-fucose transporter; 99.0 1.3E-08 2.9E-13 96.1 14.8 118 69-195 288-406 (438)
215 PRK09669 putative symporter Ya 99.0 3.5E-09 7.5E-14 100.7 10.0 112 84-195 266-387 (444)
216 PRK10429 melibiose:sodium symp 98.9 7.7E-09 1.7E-13 99.0 12.3 149 41-195 231-392 (473)
217 PRK15034 nitrate/nitrite trans 98.9 2.6E-08 5.6E-13 92.9 14.4 147 42-195 253-427 (462)
218 COG0477 ProP Permeases of the 98.9 6.6E-08 1.4E-12 87.2 16.5 143 47-195 8-157 (338)
219 TIGR00788 fbt folate/biopterin 98.9 1.1E-08 2.3E-13 97.5 11.3 122 69-196 281-413 (468)
220 PRK11102 bicyclomycin/multidru 98.9 3.4E-08 7.4E-13 91.9 14.3 124 61-191 214-344 (377)
221 KOG4332 Predicted sugar transp 98.8 1.3E-07 2.8E-12 78.9 13.6 328 50-425 46-386 (454)
222 TIGR00924 yjdL_sub1_fam amino 98.8 4.3E-08 9.3E-13 93.7 12.0 153 279-441 6-163 (475)
223 PRK15462 dipeptide/tripeptide 98.8 6.7E-08 1.4E-12 91.2 12.5 150 281-441 8-160 (493)
224 PRK09584 tppB putative tripept 98.8 1.2E-07 2.6E-12 91.2 13.4 157 275-442 13-173 (500)
225 TIGR00886 2A0108 nitrite extru 98.8 1.7E-07 3.7E-12 86.8 13.8 144 284-439 3-146 (366)
226 COG2211 MelB Na+/melibiose sym 98.8 1.9E-07 4.2E-12 86.0 13.7 149 41-195 236-395 (467)
227 PRK11652 emrD multidrug resist 98.8 4.2E-07 9.2E-12 85.1 16.5 125 64-195 230-359 (394)
228 KOG3762 Predicted transporter 98.7 4.2E-08 9.2E-13 89.9 8.9 143 47-195 377-521 (618)
229 TIGR00885 fucP L-fucose:H+ sym 98.7 5.3E-07 1.2E-11 84.5 15.6 147 284-440 5-151 (410)
230 COG2807 CynX Cyanate permease 98.7 1.2E-06 2.5E-11 76.9 16.3 147 43-196 210-359 (395)
231 PRK11462 putative transporter; 98.7 3.7E-07 7.9E-12 87.0 14.5 112 84-195 265-386 (460)
232 KOG2532 Permease of the major 98.7 1.6E-07 3.4E-12 88.3 11.3 174 43-236 260-446 (466)
233 KOG3764 Vesicular amine transp 98.7 7.6E-08 1.6E-12 85.0 8.4 160 52-233 281-450 (464)
234 KOG0252 Inorganic phosphate tr 98.7 2.9E-08 6.2E-13 89.3 5.6 191 41-243 304-504 (538)
235 KOG3762 Predicted transporter 98.7 8.6E-07 1.9E-11 81.6 14.8 153 277-442 366-519 (618)
236 PF06779 DUF1228: Protein of u 98.7 7.7E-08 1.7E-12 65.9 6.1 80 53-138 4-83 (85)
237 COG0738 FucP Fucose permease [ 98.6 5.2E-07 1.1E-11 80.3 12.7 147 40-195 235-383 (422)
238 PRK10207 dipeptide/tripeptide 98.6 4.1E-07 8.9E-12 87.1 12.3 149 282-441 14-165 (489)
239 PF03209 PUCC: PUCC protein; 98.6 2E-06 4.4E-11 77.3 15.2 172 51-234 218-395 (403)
240 PF00083 Sugar_tr: Sugar (and 98.6 6.4E-10 1.4E-14 106.2 -8.6 163 56-242 268-442 (451)
241 TIGR00806 rfc RFC reduced fola 98.5 4.3E-06 9.4E-11 77.2 16.1 118 316-441 54-172 (511)
242 PF13000 Acatn: Acetyl-coenzym 98.5 2.6E-05 5.7E-10 71.6 19.7 370 44-433 3-455 (544)
243 PF05978 UNC-93: Ion channel r 98.5 2.6E-06 5.7E-11 66.9 11.7 107 88-195 43-150 (156)
244 PRK15403 multidrug efflux syst 98.5 3.2E-06 6.9E-11 79.6 14.6 147 42-195 219-372 (413)
245 PF12832 MFS_1_like: MFS_1 lik 98.5 4.7E-07 1E-11 61.8 6.4 71 46-122 5-75 (77)
246 TIGR01301 GPH_sucrose GPH fami 98.4 1.1E-05 2.4E-10 76.1 16.0 187 41-241 258-476 (477)
247 TIGR00880 2_A_01_02 Multidrug 98.4 1.3E-06 2.9E-11 68.3 7.4 103 332-441 7-109 (141)
248 KOG1237 H+/oligopeptide sympor 98.3 0.00073 1.6E-08 65.4 25.6 140 58-210 55-227 (571)
249 KOG0254 Predicted transporter 98.3 2.7E-05 5.9E-10 75.5 15.6 179 43-243 297-490 (513)
250 KOG3810 Micronutrient transpor 98.3 1.2E-05 2.5E-10 70.1 11.2 317 92-434 52-377 (433)
251 KOG1330 Sugar transporter/spin 98.2 3.7E-06 8E-11 76.2 7.7 117 317-440 62-178 (493)
252 TIGR00805 oat sodium-independe 98.2 1.1E-06 2.4E-11 86.7 4.8 128 313-441 58-230 (633)
253 PTZ00207 hypothetical protein; 98.2 4E-05 8.8E-10 74.0 15.3 119 314-436 53-172 (591)
254 KOG2816 Predicted transporter 98.2 2.3E-05 4.9E-10 73.6 12.4 124 66-195 267-391 (463)
255 KOG2615 Permease of the major 98.1 3.7E-05 8E-10 68.1 11.8 122 69-196 290-414 (451)
256 PF03219 TLC: TLC ATP/ADP tran 98.1 0.0025 5.3E-08 60.5 23.6 293 40-359 23-354 (491)
257 TIGR00939 2a57 Equilibrative N 98.1 0.00097 2.1E-08 62.6 20.8 113 325-438 309-427 (437)
258 COG3202 ATP/ADP translocase [E 98.1 0.0022 4.7E-08 59.3 21.7 296 40-363 26-361 (509)
259 KOG1479 Nucleoside transporter 98.0 0.0007 1.5E-08 61.4 18.2 50 388-437 348-397 (406)
260 KOG2533 Permease of the major 98.0 6.8E-06 1.5E-10 77.7 5.7 139 43-187 275-421 (495)
261 PF00854 PTR2: POT family; In 98.0 0.00018 4E-09 66.7 14.1 107 113-235 2-121 (372)
262 PF06609 TRI12: Fungal trichot 98.0 0.00013 2.9E-09 70.2 13.3 195 41-242 310-559 (599)
263 KOG0255 Synaptic vesicle trans 97.9 0.00071 1.5E-08 66.0 16.3 142 86-244 354-500 (521)
264 COG3104 PTR2 Dipeptide/tripept 97.8 3.6E-05 7.8E-10 70.9 5.6 160 276-441 14-177 (498)
265 KOG3880 Predicted small molecu 97.7 0.0014 3.1E-08 56.4 13.0 108 84-195 64-171 (409)
266 PF05978 UNC-93: Ion channel r 97.5 0.008 1.7E-07 47.4 14.7 99 332-438 46-144 (156)
267 PF06813 Nodulin-like: Nodulin 97.4 0.0014 3E-08 56.2 10.2 119 314-436 28-148 (250)
268 PF07672 MFS_Mycoplasma: Mycop 97.4 0.0087 1.9E-07 50.7 13.9 241 166-433 2-256 (267)
269 PF02487 CLN3: CLN3 protein; 97.3 0.0057 1.2E-07 56.1 13.4 108 84-195 283-396 (402)
270 PF12832 MFS_1_like: MFS_1 lik 97.3 0.0048 1E-07 42.1 9.4 67 288-361 6-72 (77)
271 PF03092 BT1: BT1 family; Int 97.2 0.0017 3.7E-08 61.3 8.3 155 73-241 252-417 (433)
272 KOG2325 Predicted transporter/ 97.1 0.0034 7.3E-08 58.8 9.1 119 318-438 66-184 (488)
273 KOG3097 Predicted membrane pro 97.0 0.081 1.8E-06 46.5 16.1 100 93-193 69-180 (390)
274 PF06963 FPN1: Ferroportin1 (F 96.7 0.023 5E-07 53.1 11.8 129 60-194 277-416 (432)
275 KOG3098 Uncharacterized conser 96.7 0.035 7.6E-07 52.0 12.7 109 84-193 281-411 (461)
276 PRK03612 spermidine synthase; 96.7 0.12 2.6E-06 50.1 16.7 141 47-195 20-170 (521)
277 KOG2563 Permease of the major 96.7 0.0047 1E-07 56.5 6.4 122 68-195 293-420 (480)
278 PF05631 DUF791: Protein of un 96.5 0.6 1.3E-05 42.1 18.3 102 316-425 62-168 (354)
279 TIGR00926 2A1704 Peptide:H+ sy 96.5 0.015 3.2E-07 57.7 9.0 123 318-440 18-145 (654)
280 PF06779 DUF1228: Protein of u 96.4 0.07 1.5E-06 36.9 9.2 72 297-375 7-78 (85)
281 PF01733 Nucleoside_tran: Nucl 96.0 0.0022 4.7E-08 57.7 0.5 110 328-439 187-304 (309)
282 TIGR00769 AAA ADP/ATP carrier 95.8 0.57 1.2E-05 44.6 15.7 118 321-439 41-185 (472)
283 KOG2601 Iron transporter [Inor 95.8 0.23 5E-06 44.6 11.9 150 41-195 27-200 (503)
284 TIGR00939 2a57 Equilibrative N 95.6 0.2 4.2E-06 47.4 12.0 109 84-193 309-431 (437)
285 PF03137 OATP: Organic Anion T 95.4 0.0033 7E-08 60.9 -0.8 128 313-441 28-199 (539)
286 PF01770 Folate_carrier: Reduc 95.0 0.51 1.1E-05 43.7 12.2 95 82-176 285-382 (412)
287 PRK03612 spermidine synthase; 94.6 1.8 4E-05 42.0 15.4 143 290-441 22-167 (521)
288 KOG4830 Predicted sugar transp 94.5 0.0057 1.2E-07 51.4 -1.4 68 42-115 18-94 (412)
289 COG0477 ProP Permeases of the 94.5 0.93 2E-05 40.1 13.0 113 323-440 39-153 (338)
290 PF01733 Nucleoside_tran: Nucl 93.9 0.02 4.3E-07 51.5 0.5 106 86-192 186-306 (309)
291 KOG1479 Nucleoside transporter 93.2 1.8 4E-05 39.8 11.7 110 82-193 282-402 (406)
292 KOG0637 Sucrose transporter an 90.7 0.86 1.9E-05 42.4 6.7 124 317-440 61-200 (498)
293 KOG3880 Predicted small molecu 87.1 3.1 6.6E-05 36.8 7.2 106 84-194 290-402 (409)
294 PF07672 MFS_Mycoplasma: Mycop 84.5 3.2 7E-05 35.6 6.1 102 84-185 143-254 (267)
295 KOG3574 Acetyl-CoA transporter 81.5 19 0.00041 33.2 9.8 149 283-438 32-188 (510)
296 KOG3626 Organic anion transpor 80.2 1.2 2.5E-05 44.5 2.2 126 314-440 123-294 (735)
297 PF03219 TLC: TLC ATP/ADP tran 79.1 64 0.0014 31.2 16.4 117 321-438 56-199 (491)
298 PF11947 DUF3464: Protein of u 77.0 15 0.00033 28.7 7.0 40 395-434 106-145 (153)
299 KOG4332 Predicted sugar transp 76.8 17 0.00037 31.6 7.8 98 84-181 284-391 (454)
300 KOG3810 Micronutrient transpor 72.9 37 0.00079 31.0 9.1 94 84-177 273-369 (433)
301 TIGR02230 ATPase_gene1 F0F1-AT 71.6 27 0.00058 25.1 6.6 28 342-369 61-88 (100)
302 COG5336 Uncharacterized protei 71.1 16 0.00035 26.3 5.3 25 85-109 45-69 (116)
303 PF06912 DUF1275: Protein of u 67.6 72 0.0016 26.6 12.8 35 161-195 153-187 (209)
304 COG2233 UraA Xanthine/uracil p 63.7 61 0.0013 30.7 9.1 123 39-169 14-140 (451)
305 PF00854 PTR2: POT family; In 63.6 21 0.00046 33.0 6.4 87 355-441 2-94 (372)
306 PF13000 Acatn: Acetyl-coenzym 61.2 1.6E+02 0.0035 28.5 14.4 55 141-195 411-466 (544)
307 KOG1237 H+/oligopeptide sympor 61.2 1.3E+02 0.0029 29.8 11.4 63 134-196 457-520 (571)
308 PF02694 UPF0060: Uncharacteri 59.4 46 0.00099 24.1 5.8 50 84-133 56-105 (107)
309 PF07857 DUF1632: CEO family ( 56.0 1.4E+02 0.003 26.0 9.6 17 222-238 121-137 (254)
310 PF07760 DUF1616: Protein of u 55.7 1.5E+02 0.0033 26.4 12.1 57 138-194 22-78 (287)
311 PF11947 DUF3464: Protein of u 55.2 33 0.00071 26.9 4.9 51 133-185 95-145 (153)
312 PRK02237 hypothetical protein; 53.5 43 0.00093 24.3 4.9 50 84-133 58-107 (109)
313 PTZ00101 rhomboid-1 protease; 48.5 1.9E+02 0.0041 25.6 9.2 39 92-130 118-157 (278)
314 COG1971 Predicted membrane pro 47.5 1.6E+02 0.0034 24.2 17.2 27 343-369 156-182 (190)
315 PRK11469 hypothetical protein; 46.9 1.6E+02 0.0035 24.2 17.1 51 319-369 130-180 (188)
316 COG3162 Predicted membrane pro 46.4 1.1E+02 0.0023 21.9 5.9 40 274-313 14-55 (102)
317 COG1268 BioY Uncharacterized c 45.4 61 0.0013 26.5 5.3 25 88-112 88-112 (184)
318 KOG3097 Predicted membrane pro 42.3 2.4E+02 0.0051 25.8 8.7 22 346-367 80-101 (390)
319 COG2119 Predicted membrane pro 42.0 1.9E+02 0.0041 23.6 8.3 80 41-127 100-179 (190)
320 PF03547 Mem_trans: Membrane t 41.6 2.9E+02 0.0064 25.6 11.2 20 175-194 100-119 (385)
321 TIGR03644 marine_trans_1 proba 39.9 3.3E+02 0.0071 25.7 11.4 47 143-190 297-344 (404)
322 PF02632 BioY: BioY family; I 39.7 89 0.0019 24.5 5.3 41 89-129 60-100 (148)
323 PF11085 YqhR: Conserved membr 39.3 2E+02 0.0044 23.1 7.3 47 320-367 63-112 (173)
324 PRK11469 hypothetical protein; 38.6 1.4E+02 0.0031 24.5 6.6 76 39-127 104-180 (188)
325 PF09527 ATPase_gene1: Putativ 37.1 1E+02 0.0022 19.1 6.2 31 337-367 14-44 (55)
326 KOG1277 Endosomal membrane pro 35.0 1.5E+02 0.0032 28.1 6.5 26 330-355 334-359 (593)
327 COG3202 ATP/ADP translocase [E 34.2 4.5E+02 0.0097 25.6 14.1 119 320-440 58-205 (509)
328 COG4262 Predicted spermidine s 33.6 3.9E+02 0.0085 24.7 13.8 94 62-161 28-132 (508)
329 TIGR00801 ncs2 uracil-xanthine 32.8 4.3E+02 0.0093 25.0 9.7 121 42-172 6-132 (415)
330 PF07857 DUF1632: CEO family ( 32.5 1.6E+02 0.0034 25.7 6.1 24 41-64 180-203 (254)
331 COG4769 Predicted membrane pro 32.2 56 0.0012 25.8 3.0 51 92-148 83-133 (181)
332 KOG1277 Endosomal membrane pro 32.0 2.5E+02 0.0054 26.7 7.4 28 84-111 325-356 (593)
333 TIGR00267 conserved hypothetic 31.9 78 0.0017 25.5 4.0 23 96-118 127-149 (169)
334 PF06341 DUF1056: Protein of u 31.9 1.2E+02 0.0027 19.6 4.0 36 134-169 27-62 (63)
335 TIGR02230 ATPase_gene1 F0F1-AT 30.8 2.1E+02 0.0045 20.7 5.8 25 97-121 57-82 (100)
336 COG5336 Uncharacterized protei 30.6 2.2E+02 0.0047 20.8 6.4 34 334-367 53-86 (116)
337 COG3619 Predicted membrane pro 30.1 3.5E+02 0.0076 23.1 15.4 112 84-195 57-193 (226)
338 PF02990 EMP70: Endomembrane p 28.4 5.8E+02 0.013 25.1 14.6 25 327-352 301-325 (521)
339 KOG2601 Iron transporter [Inor 28.3 5.1E+02 0.011 24.4 11.2 27 415-441 171-197 (503)
340 PF02667 SCFA_trans: Short cha 27.9 4.4E+02 0.0096 25.2 8.5 14 97-110 75-88 (453)
341 PF04024 PspC: PspC domain; I 27.5 39 0.00084 21.7 1.3 34 203-240 23-60 (61)
342 PF11151 DUF2929: Protein of u 27.1 1.7E+02 0.0037 18.5 5.7 28 212-239 28-55 (57)
343 TIGR02840 spore_YtaF putative 26.3 3.9E+02 0.0084 22.4 15.6 32 319-350 153-184 (206)
344 PF10785 NADH-u_ox-rdase: NADH 24.4 2.1E+02 0.0045 20.0 4.5 39 96-134 32-77 (86)
345 COG3559 TnrB3 Putative exporte 24.2 6.3E+02 0.014 24.0 21.7 28 140-167 163-194 (536)
346 TIGR00366 conserved hypothetic 23.7 6.2E+02 0.013 24.2 8.7 16 274-289 240-255 (438)
347 PF06379 RhaT: L-rhamnose-prot 23.6 5.7E+02 0.012 23.4 21.8 59 64-128 58-117 (344)
348 COG2962 RarD Predicted permeas 23.5 5.3E+02 0.011 22.9 10.4 42 324-368 100-141 (293)
349 TIGR00836 amt ammonium transpo 21.5 7E+02 0.015 23.6 11.5 48 143-190 283-331 (403)
350 TIGR00210 gltS sodium--glutama 21.4 6.9E+02 0.015 23.6 8.8 99 84-195 278-383 (398)
351 PF09605 Trep_Strep: Hypotheti 20.1 4.5E+02 0.0097 21.5 6.5 39 92-130 38-76 (186)
No 1
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.5e-35 Score=262.73 Aligned_cols=347 Identities=20% Similarity=0.214 Sum_probs=276.8
Q ss_pred CCChhhHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhH
Q 013453 37 GLPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII 116 (442)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~ 116 (442)
+..+..++.+.++.|............+|++.+|+|+|..+ .|++.+.|.++..+++|+...+.||+.||++++
T Consensus 9 ~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~------aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl 82 (394)
T COG2814 9 KPMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGA------AGQLITAYALGVALGAPLLALLTGRLERRRLLL 82 (394)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHcccchHHHHH
Confidence 34566788888999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhcc
Q 013453 117 MGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 117 ~~~~~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (442)
..+.++.++++++++++||+.++++|++.|+..|.+++ ..++.++..|+++|++++++...+..++.++|.+++.++.+
T Consensus 83 ~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~ 162 (394)
T COG2814 83 GLLALFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQ 162 (394)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 99999999999999999999999999999999999998 59999999999999999999999999999999999999999
Q ss_pred ccccCCCcccccccccCCcChhHHHHHHHHHHHHHH-HHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhcccccc
Q 013453 196 PAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATP 274 (442)
Q Consensus 196 ~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (442)
.+ +||..|.+.+.++++.++ .+..+| |+..+++.+. +...
T Consensus 163 -------~~---------GWR~~F~~ia~l~ll~~~~~~~~lP--~~~~~~~~~~---------------------~~~~ 203 (394)
T COG2814 163 -------LF---------GWRATFLAIAVLALLALLLLWKLLP--PSEISGSLPG---------------------PLRT 203 (394)
T ss_pred -------Hh---------hHHHHHHHHHHHHHHHHHHHHHhCC--CccCCCCCCc---------------------chhH
Confidence 44 455555888888877754 556677 2221111100 1123
Q ss_pred cccccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchh
Q 013453 275 KKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPI 354 (442)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (442)
..+++|+|+++...+..++....++...++...++.+ ..|++....++....++++.++++. +++++.|| +.+
T Consensus 204 ~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~-----v~g~s~~~vs~~Ll~~Gv~~~~Gn~-~gGrl~dr-~~~ 276 (394)
T COG2814 204 LLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLES-----VAGFSVSAVSLVLLAFGIAGFIGNL-LGGRLADR-GPR 276 (394)
T ss_pred HHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHH-----ccCCCHhHHHHHHHHHHHHHHHHHH-HHhhhccc-cch
Confidence 4568999999999999998888888777777666554 3799999999999999999999999 77778888 777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhh
Q 013453 355 MVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAA 434 (442)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~ 434 (442)
+.+.....+..+....+.+... ..+.......+ .++..............+ .-|+.++.+.+++....++|.++
T Consensus 277 ~~l~~~~~l~a~~~l~l~~~~~----~~~~~~~~~~~-wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~ 350 (394)
T COG2814 277 RALIAALLLLALALLALTFTGA----SPALALALLFL-WGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIAL 350 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHhcc----hHHHHHHHHHH-HHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHH
Confidence 7777776666666666555432 22222222222 222222222333444444 33589999999999999999999
Q ss_pred hcccCCC
Q 013453 435 GPAGGGA 441 (442)
Q Consensus 435 gp~i~G~ 441 (442)
|..++|.
T Consensus 351 GA~lGG~ 357 (394)
T COG2814 351 GAALGGL 357 (394)
T ss_pred HHHHHHH
Confidence 9988874
No 2
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=6.4e-35 Score=272.94 Aligned_cols=377 Identities=13% Similarity=0.060 Sum_probs=264.8
Q ss_pred CChhhHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHH
Q 013453 38 LPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (442)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~ 117 (442)
.+++.+..+++..++++++...+....|.+.+|+|.+..+ .|++.+++.+++.+++++.|+++||+|||+++..
T Consensus 5 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~------~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~ 78 (412)
T TIGR02332 5 LFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATM------FGLAATLFYAAYVICGIPSNIMLAIIGARRWIAG 78 (412)
T ss_pred ehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHH------HHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHH
Confidence 3456667788888899999999999999999999999999 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccchHHHHHHHHHHHHhhcchhhHH-HHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccc
Q 013453 118 GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (442)
Q Consensus 118 ~~~~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 196 (442)
+.++++++.+++++++|++++++.|+++|++.+...|. ..++.|++|+++|++++++++.+.++|.++++.+++++.+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~ 158 (412)
T TIGR02332 79 IMVLWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILAL 158 (412)
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999988884 78899999999999999999999999999999999988741
Q ss_pred cccCCCcccccccccCCcChhHHHHHHHHHHHH-HHHHhhccccCCCCCC-CCccchhhhhhhhhhhhh---hhhhhccc
Q 013453 197 AEKYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHND-DDDSCDVSYDALESASAE---VKEEEGRE 271 (442)
Q Consensus 197 ~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~ 271 (442)
.. ..+ ..+||..+.+.++..++. .+..+++||+|++.+. .+++++...+..+....+ .++..++.
T Consensus 159 ~~-~~~---------~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (412)
T TIGR02332 159 DG-LMA---------LKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHA 228 (412)
T ss_pred CC-CCC---------ccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccc
Confidence 10 001 234555557776666554 4455677888754321 111111110111100000 00000000
Q ss_pred ----ccccccccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHH
Q 013453 272 ----ATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFL 347 (442)
Q Consensus 272 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (442)
...+++++ ++.++...+.+++.......+..+.|.++... +.+++..+++.......++.+++.+ ...++
T Consensus 229 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~----~~~~s~~~~~~~~~~~~l~~~~g~l-~~g~l 302 (412)
T TIGR02332 229 AMPQRSMLREIF-TPAIMLYTLAYFCLTNTLSAINIWTPQILQSF----NQGSSNIMIGLLAAIPQFCTIFGMI-WWSRH 302 (412)
T ss_pred cccHHHHHHHhc-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCCCcHHHhHHHhhHHHHHHHHHHH-HHHHH
Confidence 11223333 57777777777777777777888888887541 2467788889889999999999988 77777
Q ss_pred HHhhchhHH-HHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHH
Q 013453 348 ERILGPIMV-ARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMT 426 (442)
Q Consensus 348 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 426 (442)
.||+++|+. .........+.+. +... ... . ......... .........+.......+..|++.|+++.|+.+.
T Consensus 303 ~dr~~~r~~~~~~~~~~~~~~~~-~~~~--~~~-~-~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~ 376 (412)
T TIGR02332 303 SDRLKERKHHTALPYLFAAAGWL-LASA--TDH-N-LIQLLGIIM-ASMGSFSAMAIFWTTPDQSISLQARAIAIAVINA 376 (412)
T ss_pred hcccCccHHHHHHHHHHHHHHHH-HHHh--cCC-H-HHHHHHHHH-HHHHhhhhhhHHHhhcccccchHHHHHHHHHHHH
Confidence 788776553 3333333333221 1111 111 1 111111111 1111112223344555677899999999999999
Q ss_pred HHHHHHhhhcccCCCC
Q 013453 427 GMSLFKAAGPAGGGAL 442 (442)
Q Consensus 427 ~~~~g~~~gp~i~G~l 442 (442)
..++|++++|.+.|.+
T Consensus 377 ~~~~g~~~~p~~~g~i 392 (412)
T TIGR02332 377 TGNIGSALSPFLIGIL 392 (412)
T ss_pred hhhhhhhhhhhhcccc
Confidence 9999999999988763
No 3
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=1e-34 Score=277.93 Aligned_cols=371 Identities=15% Similarity=0.083 Sum_probs=275.3
Q ss_pred hhhHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHH
Q 013453 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (442)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~ 119 (442)
+..+..+++..++..++.++++..+|.+.+|+|.+.++ .+|+.+.|.++..++++++|+++||+|||++++++.
T Consensus 5 ~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~------~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~ 78 (495)
T PRK14995 5 WLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNE------LLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGG 78 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhH------HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 44566788899999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhc-cccchhhhhhhhhHhhhhHHHHHHHhhhhhcccc
Q 013453 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIF-REEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (442)
Q Consensus 120 ~~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 197 (442)
+++.++++++++++|++.++++|+++|++.+...| ....+.+.+ |+++|++++++......+|..+||.+++++.+
T Consensus 79 ~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~-- 156 (495)
T PRK14995 79 TLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLE-- 156 (495)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--
Confidence 99999999999999999999999999999888887 477776765 67999999999999999999999999999998
Q ss_pred ccCCCcccccccccCCcChhHHHHHHHHHHHH-HHHHhhccccCCCCCCCCccchhhh---------hhhhh---hh-hh
Q 013453 198 EKYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSY---------DALES---AS-AE 263 (442)
Q Consensus 198 ~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~---------~~~~~---~~-~~ 263 (442)
.+|||+.| ++...+.++. .+..+++||++++.+++.+...... ....+ .. ..
T Consensus 157 -----~~gwr~~f---------~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~ 222 (495)
T PRK14995 157 -----HFYWGSVF---------LINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSL 222 (495)
T ss_pred -----cCChHHHH---------HHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCch
Confidence 45555444 6655555444 3445567776543222111111000 00000 00 00
Q ss_pred ------------------hhhhhcccccccccccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHH
Q 013453 264 ------------------VKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMV 325 (442)
Q Consensus 264 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (442)
..+.+.+.+....+++|+|.+....+..++......+...++|.|++.. +|+++.++
T Consensus 223 ~~~~~~~~~~~~~l~~f~~~e~~~~~p~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v-----~g~s~~~a 297 (495)
T PRK14995 223 WVTSLTLLTGALLLGLFIRTQLAASRPMIDMRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFV-----HGLSPLEA 297 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCCHHHH
Confidence 0111222333445788999888777777776666666666777766533 68999999
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhh
Q 013453 326 GEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLF 405 (442)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (442)
|....+..++..++.+ +.+++.||.++|+.+..+..+..++..++....... ..+.. .....+.+.+.....+...
T Consensus 298 g~~~~~~~~~~~~~~~-~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~--~~~~~-~~~~~l~G~g~g~~~~~~~ 373 (495)
T PRK14995 298 GMFMLPVMVASGFSGP-IAGILVSRLGLRLVATGGMALSALSFYGLAMTDFST--QQWQA-WGLMALLGFSAASALLAST 373 (495)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCC--chHHH-HHHHHHHHHhHHHHHHHHH
Confidence 9999999999999988 666677788888888777777666655544332211 22221 2222333334444455566
Q ss_pred hhhcccCChhhhhHHHHHHHHHHHHHHhhhcccCCC
Q 013453 406 ILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGA 441 (442)
Q Consensus 406 ~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i~G~ 441 (442)
....+..|+++++.+.++.++.+++|+.+|+.+.|.
T Consensus 374 ~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~ 409 (495)
T PRK14995 374 SAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGL 409 (495)
T ss_pred HHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 666777999999999999999999999999988764
No 4
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=2.7e-35 Score=269.63 Aligned_cols=332 Identities=15% Similarity=0.050 Sum_probs=237.5
Q ss_pred hcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhccch
Q 013453 55 LPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVN 134 (442)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a~~ 134 (442)
.....+.+.+|.+.+|+|.++.+ .|++.+.+.+++.+++++.|+++||+|||+++..+......+......+++
T Consensus 5 ~~~~~~~~~lp~i~~~~~~s~~~------~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~ 78 (368)
T TIGR00903 5 AIWVTFSPVLSLVAEDIDVSKEE------LGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFN 78 (368)
T ss_pred HHHHHHHhhHHHHHHHhCcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhcc
Confidence 34456789999999999999999 999999999999999999999999999998876655555444433333479
Q ss_pred HHHHHHHHHHHHhhcchhhHHHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCcccccccccCCc
Q 013453 135 FWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFP 214 (442)
Q Consensus 135 ~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~ 214 (442)
++.+++.|+++|++.+...+....++|++|+|+|++++++.+.+..+|.++++++++++.+ .+|
T Consensus 79 ~~~l~~~R~l~G~g~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~-------~~g--------- 142 (368)
T TIGR00903 79 YEWLLACQLLAALGQPFLLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYT-------AGG--------- 142 (368)
T ss_pred HHHHHHHHHHHHhHhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------ccc---------
Confidence 9999999999999988765567777999999999999999999999999999999999987 344
Q ss_pred ChhHHHHHHHHHHHH-HHHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhcccccccccccccchhHHHHHHHHH
Q 013453 215 YFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCV 293 (442)
Q Consensus 215 ~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (442)
||..+.+.++++++. ++.++++||+|++++++.+ .. + ..+.+++++++|.+|...+..++
T Consensus 143 Wr~~f~~~~~l~~~~~~~~~~~lp~~p~~~~~~~~---~~---------~-------~~~~~~~ll~~~~~~~~~~~~~~ 203 (368)
T TIGR00903 143 LQLLIIPIAAVAAAGIILVLAALPALPFQAAEGFG---FK---------D-------AVKEFGALAGRKDLWIIGAILGF 203 (368)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcc---hH---------H-------HHHHHHHHHcChhHHHHHHHHHH
Confidence 555557766666554 4456678988754321100 00 0 00135678999999999999999
Q ss_pred HHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHH
Q 013453 294 FSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPY 373 (442)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (442)
......++.++.|.|+.+ .|++.. .+.......+.+.++...+.++.+|+..|+...........+.+..+..
T Consensus 204 ~~~~~~~~~~wlp~~L~~------~g~s~~-~~~~~~l~~~~g~~g~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~ 276 (368)
T TIGR00903 204 GVALFDNLAIWLEAALRP------AGLEDI-AGDAVALAILAGLIGVAVIPDRVARAGLRSIYIRAAALLIAAFFLALAF 276 (368)
T ss_pred HHHHHHHHHHHHHHHHHH------CCCChH-HHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999988853 245543 5666666666666665555555555422333233233333333322222
Q ss_pred HHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhcccCC
Q 013453 374 IAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGG 440 (442)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i~G 440 (442)
.. ..+... ....+.+++.....+..+.+.+|.+|++.||++.|+.+..+++++.++|.+.|
T Consensus 277 ~~-----~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~ 337 (368)
T TIGR00903 277 EL-----NRLALF-AFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAM 337 (368)
T ss_pred cc-----ccHHHH-HHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHH
Confidence 11 111212 22222233344455667788999999999999999999999999999988765
No 5
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=3.8e-35 Score=285.52 Aligned_cols=377 Identities=15% Similarity=0.126 Sum_probs=270.9
Q ss_pred HHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHH
Q 013453 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (442)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i 124 (442)
.+.++.+...++...+...+|.+.++++.+..+ .+++.+++.++.+++++++|+++||+|||+++++++++.++
T Consensus 171 i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~------~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i 244 (742)
T TIGR01299 171 VLGLALMADGVEVFVVGFVLPSAEKDLCIPDSG------KGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGF 244 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 455566666777777888999999999999988 99999999999999999999999999999999999999999
Q ss_pred HHHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCc
Q 013453 125 FNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNL 203 (442)
Q Consensus 125 ~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~ 203 (442)
+.++++++++++.++++|++.|++.|...+ +.+++.|++|+++|++.+++..++..+|.++++.++..+.. .
T Consensus 245 ~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~-------~ 317 (742)
T TIGR01299 245 FAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIP-------H 317 (742)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------h
Confidence 999999999999999999999999888778 59999999999999999999999999999999999988876 5
Q ss_pred ccccccc----cCCcChhHHHHHHHHHHHHHHHHhhccccCCCCCCCCccch--hhhhhhhhhhh---------------
Q 013453 204 FSSESLF----GKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCD--VSYDALESASA--------------- 262 (442)
Q Consensus 204 ~gw~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~--~~~~~~~~~~~--------------- 262 (442)
+||+... ...+||..+.+.+++.++.++..+++||+|++...+.+.++ +..+++.....
T Consensus 318 ~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~ 397 (742)
T TIGR01299 318 YGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHI 397 (742)
T ss_pred ccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHH
Confidence 6665321 24578998888888888777788889999987433322111 11111110000
Q ss_pred hh--hhh-----hcccc------------------cccccccccchh---HHHHHHHHHHHHHHhhHHHHHHHHhcCC--
Q 013453 263 EV--KEE-----EGREA------------------TPKKSLLKNWPL---MSSIIVYCVFSLHDMAYSEIFSLWANSP-- 312 (442)
Q Consensus 263 ~~--~~~-----~~~~~------------------~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 312 (442)
+. ++. +.+.. ..++++++.+.. +...+..++..+.++++..++|..+...
T Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~ 477 (742)
T TIGR01299 398 KTIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQA 477 (742)
T ss_pred HHhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 000 00000 023345554433 3344445555566666677777543210
Q ss_pred --------------ccc-------C-------cc------cC--------------------------------------
Q 013453 313 --------------KKL-------G-------GL------NY-------------------------------------- 320 (442)
Q Consensus 313 --------------~~~-------~-------~~------~~-------------------------------------- 320 (442)
+.. + ++ |+
T Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~ 557 (742)
T TIGR01299 478 DDYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFE 557 (742)
T ss_pred HHHHhhhccccccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhcc
Confidence 000 0 00 00
Q ss_pred -----------------------------------ChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHHHHH
Q 013453 321 -----------------------------------STQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTI 365 (442)
Q Consensus 321 -----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (442)
+.........+.+++.+++.+ +..++.||+|||+++..+.++.+
T Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~i-l~g~L~Dr~GRr~~l~~~~~lsa 636 (742)
T TIGR01299 558 NTDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNI-VSALLMDKIGRLRMLAGSMVLSC 636 (742)
T ss_pred ccchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCHHHHHHHHHHHH
Confidence 001123445566778888887 77778888899999998888888
Q ss_pred HHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhcccCCC
Q 013453 366 PLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGA 441 (442)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i~G~ 441 (442)
++.+++.+... ... .++..++.+++..+..+....+++|.+|++.|++++|+.++...+|.++||.++|.
T Consensus 637 i~~ll~~~~~s-----~~~-ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~ 706 (742)
T TIGR01299 637 ISCFFLSFGNS-----ESA-MIALLCLFGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGS 706 (742)
T ss_pred HHHHHHHHHcc-----HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88776655432 111 22222233444455677888999999999999999999999999999999998764
No 6
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.9e-35 Score=258.11 Aligned_cols=366 Identities=18% Similarity=0.150 Sum_probs=285.4
Q ss_pred ChhhHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHH
Q 013453 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (442)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~ 118 (442)
+++.++.++++....++.+.......|.+.++.++|.+| .|++.+.+.+.+.++-++.|.++||.++|+.+.++
T Consensus 27 r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~------lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~g 100 (448)
T COG2271 27 RIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQ------LGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFG 100 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHH
Confidence 344455788888888889999999999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhh--hhhcc
Q 013453 119 TASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG--GFLAQ 195 (442)
Q Consensus 119 ~~~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~--~~l~~ 195 (442)
+++.++.+++++++++.+.+.+.-+++|..+|.-.| +...++.|++++|||+..++++.+.++|..+.|++. +++..
T Consensus 101 Lilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~ 180 (448)
T COG2271 101 LILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAF 180 (448)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHh
Confidence 999999999999999999999999999999999888 799999999999999999999999999999999999 77776
Q ss_pred ccccCCCcccccccccCCcChhHHHHHHHHHHHH-HHHHhhccccCCCCCCCCccchhhhhhhhhhhhhh-hhhhccc--
Q 013453 196 PAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEV-KEEEGRE-- 271 (442)
Q Consensus 196 ~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-- 271 (442)
+.+ ||..++..++++++. ++.++..+|+|+...-++-+ +.+++..+. +++++++
T Consensus 181 -------~~~---------w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie------~~~~d~~e~~~~~~~~~~l 238 (448)
T COG2271 181 -------HGG---------WRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIE------EYRGDPLEIYEEEKENEGL 238 (448)
T ss_pred -------ccc---------hhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHH------HhhcCchhhhhhhccCCCc
Confidence 334 444557777777665 55667788888654332211 111111111 1111111
Q ss_pred ---ccccccccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHH
Q 013453 272 ---ATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLE 348 (442)
Q Consensus 272 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (442)
..-.+.+++||.+|.+.+..++....-++...+.|+|+.+. .|+|..+++...+.+-++++++.+ +.++++
T Consensus 239 s~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~-----k~~s~~~a~~a~~lfE~agl~G~L-l~GwlS 312 (448)
T COG2271 239 TAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEV-----KGFSLVKANWAISLFEVAGLPGTL-LAGWLS 312 (448)
T ss_pred cHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh-----cCCCHHHHHHHHHHHHHHhhHHHH-HHHHHH
Confidence 12345678999999999999999999999999999998864 688999999999999999999999 666666
Q ss_pred Hh-h-chhHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHH
Q 013453 349 RI-L-GPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMT 426 (442)
Q Consensus 349 ~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 426 (442)
|+ + |||....+.+.+.....++..+... + .......++.+..+++..+..-..-....|..|++..|++.|+...
T Consensus 313 DklfkgrR~p~~~i~~~~i~~~~~~~w~~~--~-~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Gl 389 (448)
T COG2271 313 DKLFKGRRGPMALIFMLLITASLVLYWLAP--N-GSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGL 389 (448)
T ss_pred HHhcccccchHHHHHHHHHHHHHHHHHcCC--C-ccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhh
Confidence 65 3 5666555554444444443333321 1 1223333444444555555555667778899999999999999999
Q ss_pred HHHH-HHhhhcccCCC
Q 013453 427 GMSL-FKAAGPAGGGA 441 (442)
Q Consensus 427 ~~~~-g~~~gp~i~G~ 441 (442)
+.++ |.+.+....|+
T Consensus 390 f~Yl~Ga~~a~~~~g~ 405 (448)
T COG2271 390 FAYLIGAALAGLPLGY 405 (448)
T ss_pred HHHHhhHHhcCCccee
Confidence 9999 88888777765
No 7
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=4.3e-35 Score=279.02 Aligned_cols=369 Identities=15% Similarity=0.072 Sum_probs=254.1
Q ss_pred HHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHH
Q 013453 44 FSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVV 123 (442)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~ 123 (442)
...++..++.++++..+.+..|.+.+|+|.+..+ .|++.+++.+++.+++++.|+++||+|||+++..+.++++
T Consensus 32 ~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~------~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~ 105 (467)
T PRK09556 32 LVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTE------LGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSA 105 (467)
T ss_pred HHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHH
Confidence 3556666777778889999999999999999999 9999999999999999999999999999999998888887
Q ss_pred HHHHHHhc-----cchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhcccc
Q 013453 124 IFNTLFGL-----SVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (442)
Q Consensus 124 i~~~~~~~-----a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 197 (442)
+..+..++ +++++.+++.|+++|++.+...| ..++++|++|+++|++++++.+.+.++|.++++.+..++.+..
T Consensus 106 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~ 185 (467)
T PRK09556 106 ICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYF 185 (467)
T ss_pred HHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhh
Confidence 77766554 68999999999999999888877 5889999999999999999999999999999999987766410
Q ss_pred ccCCCcccccccccCCcChhHHHHHHHHHHHHH-HHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhccccc-cc
Q 013453 198 EKYPNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREAT-PK 275 (442)
Q Consensus 198 ~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 275 (442)
+ ..+|+..+.+.+++.++.. +.+++.+++|++.+..++++ ...+......++.++++..... ..
T Consensus 186 ------~-------~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (467)
T PRK09556 186 ------F-------DGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEE-IFGEPISEEDKETESTDMTKWQIFV 251 (467)
T ss_pred ------c-------cCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhh-cccCccchhhhccccccCcHHHHHH
Confidence 0 1124444455555555443 34445566554322111100 0000000000000000000001 11
Q ss_pred ccccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhH
Q 013453 276 KSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIM 355 (442)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (442)
++.+++|.+|...+..++......+...+.|.|+.+ .+|++..+++.......++.+++.+ ..+++.||.++|+
T Consensus 252 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~-----~~g~s~~~a~~~~~~~~~~~~ig~~-~~G~lsDr~g~r~ 325 (467)
T PRK09556 252 EYVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQ-----ELGFSKEDAINTFTLFEIGALVGSL-LWGWLSDLANGRR 325 (467)
T ss_pred HHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----ccCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCCc
Confidence 236889999988888888777777777888888753 3689999999999888999999988 7777888888877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHH-HHhh
Q 013453 356 VARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSL-FKAA 434 (442)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~~ 434 (442)
..........+........ . ....+. ..+..+..+....+..........|..|++.+|++.|+.+...++ |.++
T Consensus 326 ~~~~~~~~~~~~~~~~~~~-~--~~~~~~-~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~ 401 (467)
T PRK09556 326 ALVACIALALIIFTLGVYQ-H--ATSEYM-YLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSF 401 (467)
T ss_pred hHHHHHHHHHHHHHHHHHH-h--cCcHHH-HHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHH
Confidence 6555433333322222221 1 111211 112222222222222222335666899999999999999999997 7799
Q ss_pred hcccCCCC
Q 013453 435 GPAGGGAL 442 (442)
Q Consensus 435 gp~i~G~l 442 (442)
+|.+.|++
T Consensus 402 ~~~~~G~i 409 (467)
T PRK09556 402 AKVGLGMI 409 (467)
T ss_pred HhhhHHHH
Confidence 99988753
No 8
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=4e-34 Score=268.85 Aligned_cols=374 Identities=15% Similarity=0.168 Sum_probs=260.1
Q ss_pred CCChhhHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhH
Q 013453 37 GLPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII 116 (442)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~ 116 (442)
+.+++.+...++..+.+.++.....+..|.+.+++|.++.+ .+++.+.+.++..+++++.|+++||+|||++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~------~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~ 81 (405)
T TIGR00891 8 RAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVD------AASLISAALISRWFGALMFGLWGDRYGRRLPMV 81 (405)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhh------HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 34556667888999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhcc
Q 013453 117 MGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 117 ~~~~~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (442)
.+.++.+++.++++++++++.+++.|++.|++.+...+ ..+++.|++|+++|+++.++.+.+..+|..+++.+++.+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~ 161 (405)
T TIGR00891 82 TSIVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVP 161 (405)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999888877 59999999999999999999999999999999999999886
Q ss_pred ccccCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhc---ccc
Q 013453 196 PAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEG---REA 272 (442)
Q Consensus 196 ~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 272 (442)
..+ .+||..+.+.++..++..+....+||++++++++++++ ...+..++..++++..+. +..
T Consensus 162 -------~~~-------~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 226 (405)
T TIGR00891 162 -------VWG-------DGWRALFFISILPIIFALWLRKNIPEAEDWKEKHAGKA-LVRTMVDILYGGEHRIANIVMTLA 226 (405)
T ss_pred -------hcC-------ccHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHhhhhh-hhhhHHHHHhccchhhhhhhhhhh
Confidence 222 12555556666555555555566777654322111110 000000000000000000 000
Q ss_pred ccccccc-ccch-hHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHh
Q 013453 273 TPKKSLL-KNWP-LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI 350 (442)
Q Consensus 273 ~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (442)
...++.. +++. +........+..........++|.|+. +++|++..+.+.+.....++.+++.+ ...++.||
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~g~s~~~~~~~~~~~~~~~~~g~~-~~g~l~dr 300 (405)
T TIGR00891 227 AAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLK-----ADLGLSPHTVANIVVFSNIGAIVGGC-VFGFLGDW 300 (405)
T ss_pred HHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHH-----HHhCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 0011111 1111 112222222223333334445555543 23688999999999999999999988 66777888
Q ss_pred hchhHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHH
Q 013453 351 LGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSL 430 (442)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~ 430 (442)
++||+.+..+.....+........ ....+.. .....+.++......+.....+.|..|+++|+++.|+.+...++
T Consensus 301 ~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 375 (405)
T TIGR00891 301 LGRRKAYVCSLLAGQLLIIPVFAI----GANVAVL-GLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNL 375 (405)
T ss_pred hCchhhhHHHHHHHHHHHHHHHHh----CCchHHH-HHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHH
Confidence 899888777665543332222111 1122221 22212223333444556677888999999999999999999999
Q ss_pred HHhhhcccCCCC
Q 013453 431 FKAAGPAGGGAL 442 (442)
Q Consensus 431 g~~~gp~i~G~l 442 (442)
|..++|.+.|++
T Consensus 376 g~~~g~~~~g~l 387 (405)
T TIGR00891 376 GGALAPIIGALL 387 (405)
T ss_pred HHHHHHHHHHHH
Confidence 999999988753
No 9
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=5.3e-34 Score=268.96 Aligned_cols=365 Identities=15% Similarity=0.115 Sum_probs=251.9
Q ss_pred hHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHH
Q 013453 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (442)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~ 121 (442)
......+..++..++...+.+.+|.+.+++|.+..+ .|++.+.+.+++.+++++.|+++||+|||+++.++.++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~ 97 (434)
T PRK11663 24 ILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSD------IGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIA 97 (434)
T ss_pred HHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHH
Confidence 334556666777777778888999999999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccC
Q 013453 122 VVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKY 200 (442)
Q Consensus 122 ~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~ 200 (442)
.+++.++++++++++.+++.|++.|++.|...+ ..+++.|++|+++|++++++.+.+.++|..++|.+++.+.+
T Consensus 98 ~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~----- 172 (434)
T PRK11663 98 TGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIAL----- 172 (434)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Confidence 999999999999999999999999998887777 58999999999999999999999999999999999999987
Q ss_pred CCcccccccccCCcChhHHHHHHHHHHHH-HHHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhcccccc-c-cc
Q 013453 201 PNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATP-K-KS 277 (442)
Q Consensus 201 ~~~~gw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~ 277 (442)
.+ +||..+.+.+++.++. ++..+++||+|++...++..+.+. +. ++.. ++.+.++.+... . ..
T Consensus 173 --~~---------gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~-~~~~-~~~~~~~~~~~~~~~~~ 238 (434)
T PRK11663 173 --HY---------GWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRH-DA-LELA-QQQEGAGLSRKEILTKY 238 (434)
T ss_pred --cc---------cHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccc-cc-cccc-hhccccCCChhhhHHHH
Confidence 34 4555556666655544 344556787665432111100000 00 0000 000000000011 1 12
Q ss_pred ccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhh--ch-h
Q 013453 278 LLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL--GP-I 354 (442)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~ 354 (442)
.++++.++...+..++..........++|.|+.. .+|++..+.+...+...++..++++ +.+++.||+ ++ +
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~-----~~g~s~~~a~~~~~~~~~~~~~g~~-~~g~l~dr~~~~~r~ 312 (434)
T PRK11663 239 VLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSE-----TLGVDLVTANSAVSMFELGGFIGAL-VAGWGSDKLFNGNRG 312 (434)
T ss_pred HhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----ccCCCHHHHHHHHHHHHHHHHHHHH-HHhhhHHHhccCCcc
Confidence 5677888887777766666666677777877643 2688999999999999999999998 666666665 22 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhh
Q 013453 355 MVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAA 434 (442)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~ 434 (442)
...........+....+..... . .... .....+..+++..+..........|..|++.|+++.|+.++..++|.++
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~--~-~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~ 388 (434)
T PRK11663 313 PMNLIFAAGILLSVGSLWLMPF--A-SYVM-QAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAAL 388 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHccc--c-cHHH-HHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHH
Confidence 2222211111111111111111 1 1111 1111121222222222233456678899999999999999999999999
Q ss_pred hcccCCC
Q 013453 435 GPAGGGA 441 (442)
Q Consensus 435 gp~i~G~ 441 (442)
+|.+.|+
T Consensus 389 ~p~~~g~ 395 (434)
T PRK11663 389 SGYPLAK 395 (434)
T ss_pred hcccHHH
Confidence 9999875
No 10
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=3.9e-34 Score=268.15 Aligned_cols=361 Identities=17% Similarity=0.126 Sum_probs=260.1
Q ss_pred HHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHh
Q 013453 51 LCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFG 130 (442)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~ 130 (442)
++..++...+....|.+.+++|.+..+ .+++.+++.++..++.++.|+++||+|||+++..+.++..++.++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~g~s~~~------~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~ 77 (399)
T TIGR00893 4 VINYLDRANLSFAAPMLQEDLGLSAAQ------YGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQA 77 (399)
T ss_pred hHHHHHHHhhhHhHHHHHHhhCCChhh------HHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHH
Confidence 455667777888889999999999999 99999999999999999999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCccccccc
Q 013453 131 LSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESL 209 (442)
Q Consensus 131 ~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~ 209 (442)
++++++.+++.|++.|++.+...+ ..+++.|++|+++|++++++.+...++|..++|.+++.+.+
T Consensus 78 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-------------- 143 (399)
T TIGR00893 78 FAGAYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILI-------------- 143 (399)
T ss_pred HHcCHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHH--------------
Confidence 999999999999999999888888 59999999999999999999999999999999999999887
Q ss_pred ccCCcChhHHHHHHHHHHHHHH-HHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhcccccccccccccchhHHHH
Q 013453 210 FGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSI 288 (442)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (442)
..+|+..+.+.++..++..+ ..+..||++++.+..+++++....+....+.+.++++++.....++.+++|+++...
T Consensus 144 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (399)
T TIGR00893 144 --HFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLA 221 (399)
T ss_pred --hCCchHHHHHHHHHHHHHHHHhhheecCCCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHH
Confidence 34455555766666655544 344556655432221111111000000000011111222334566788899998888
Q ss_pred HHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHH-HHHHHHHHHHH
Q 013453 289 IVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMV-ARIAGVLTIPL 367 (442)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 367 (442)
+..++..........+.+.|.... ++.+..+.+.......++.+++.+ ...++.||.+||+. .........+.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~ 295 (399)
T TIGR00893 222 LGQFLVNIGLGFFLTWFPTYLVQE-----RGLSILEAGFMASLPGIVGFIGMI-LGGRLSDLLLRRGKSLVFARKTAIIA 295 (399)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHH-----hcccHHHhhHHHHHHHHHHHHHHH-HHHHHHHHHhhcccchhHHHHHHHHH
Confidence 888888887777777888776533 688899999999998999999988 66667777777641 11111111111
Q ss_pred ---HHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhcccCCCC
Q 013453 368 ---LTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGAL 442 (442)
Q Consensus 368 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i~G~l 442 (442)
.......... ....+. . ......+....+..+....+..|..|+++|+++.|+.+...++|..++|.+.|++
T Consensus 296 ~~~~~~~~~~~~~-~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l 370 (399)
T TIGR00893 296 GLVLSLLMFATNY-VNIPYA-A-LALVALGFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAI 370 (399)
T ss_pred HHHHHHHHHHhcc-chhHHH-H-HHHHHHHHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhh
Confidence 1111111110 111111 1 1122222233346788889999999999999999999999999999999998864
No 11
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=100.00 E-value=4.5e-34 Score=264.63 Aligned_cols=349 Identities=16% Similarity=0.094 Sum_probs=264.2
Q ss_pred HHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHH
Q 013453 46 IWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIF 125 (442)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~ 125 (442)
++...++..++.....+.+|.+.++++.++.+ .+++.+++.++..++++++|+++||+|||++++.+.++..++
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~ 77 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVLAGTGSASV------LSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVL 77 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccHHH------HHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHH
Confidence 45677778888888899999999999999998 999999999999999999999999999999999999999999
Q ss_pred HHHHhccc-----hHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhcccccc
Q 013453 126 NTLFGLSV-----NFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (442)
Q Consensus 126 ~~~~~~a~-----~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 199 (442)
.++.++++ +++.+++.|++.|++.+...+ ..+++.|++|+++|++++++.+.+..+|.+++|.+++.+.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~---- 153 (365)
T TIGR00900 78 VAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYA---- 153 (365)
T ss_pred HHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH----
Confidence 88888877 999999999999999999888 49999999999999999999999999999999999999987
Q ss_pred CCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhccccccccccc
Q 013453 200 YPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLL 279 (442)
Q Consensus 200 ~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (442)
..+|+..+.+.++..++..+..+.++++++.++++++.+++. .++.....++++
T Consensus 154 ------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~ 207 (365)
T TIGR00900 154 ------------TLGIKWAIWVDAVGFAISALLIVSVRIPELAASEIQALSNAV--------------LRDTREGIKFVL 207 (365)
T ss_pred ------------HhhHHHHHHHHHHHHHHHHHHHHhcccccCCCccccccchhH--------------HHHHHhHHHHHH
Confidence 344555556666555554444333332211111111100000 000112345677
Q ss_pred ccchhHHHHHHHHHHHHHHhhHH-HHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHH
Q 013453 280 KNWPLMSSIIVYCVFSLHDMAYS-EIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVAR 358 (442)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (442)
|+|.++...+..++......... .+.|.+.... +|.+..+.+......+++.+++.+ ...+++||.+|++...
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~ 281 (365)
T TIGR00900 208 KNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKY-----LGRGSTHYGWVLAAFGLGALLGAL-LLGLLGRYFKRMALMT 281 (365)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH-----hCCchHHHHHHHHHHHHHHHHHHH-HHHHHHHHhchhHHHH
Confidence 88888877777666666555554 5566655422 588899999999999999999988 6668888888888887
Q ss_pred HHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhccc
Q 013453 359 IAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAG 438 (442)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i 438 (442)
.+.....+......+... ..+ ...+..+..++......+....+..|..|+++|+++.|+.++..+++..++|.+
T Consensus 282 ~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~ 356 (365)
T TIGR00900 282 GAIFVIGLAILVVGLTPP----NFP-LFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLIL 356 (365)
T ss_pred HHHHHHHHHHHHHHhhch----hHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 776666655555444321 122 233333444445555667788889999999999999999999999999999998
Q ss_pred CCC
Q 013453 439 GGA 441 (442)
Q Consensus 439 ~G~ 441 (442)
.|+
T Consensus 357 ~g~ 359 (365)
T TIGR00900 357 AGP 359 (365)
T ss_pred HHH
Confidence 875
No 12
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=1.1e-33 Score=263.62 Aligned_cols=342 Identities=15% Similarity=0.112 Sum_probs=245.6
Q ss_pred hhhHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHH
Q 013453 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (442)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~ 119 (442)
+..++.+.+..++.........+.+|.+.+++|.+..+ .|++.+.+.+++.+++++.|+++||+|||+++..+.
T Consensus 8 ~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~------~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 81 (390)
T PRK03545 8 WLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQ------VGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLF 81 (390)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHH
Confidence 33444555555554444445566789999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccc
Q 013453 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (442)
Q Consensus 120 ~~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 198 (442)
++..++++.+++++|++.+++.|+++|++.+...+ ..+++.|++|+++|++++++...+.++|..++|++++.+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~--- 158 (390)
T PRK03545 82 VLFIASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQ--- 158 (390)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHH---
Confidence 99999999999999999999999999999888877 58999999999999999999999999999999999999987
Q ss_pred cCCCcccccccccCCcChhHHHHHHHHHHHHHH-HHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhccccccccc
Q 013453 199 KYPNLFSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKS 277 (442)
Q Consensus 199 ~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (442)
.+| ||..+.+.+++.++..+ ....+||++++++ + . .+..++
T Consensus 159 ----~~g---------w~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~---~---~-------------------~~~~~~ 200 (390)
T PRK03545 159 ----YLG---------WRTTFLAIGGGALITLLLLIKLLPLLPSEHS---G---S-------------------LKSLPL 200 (390)
T ss_pred ----Hhc---------HHHHHHHHHHHHHHHHHHHHHhCCCCCCCCc---c---h-------------------HHHHHH
Confidence 344 45555776666655543 3344565432110 0 0 012345
Q ss_pred ccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHH
Q 013453 278 LLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVA 357 (442)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (442)
.+|+|.++......++..........+.+.++. +..|++..+.+......+++.+++++ ..+++.||.+++...
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----~~~g~s~~~~~~~~~~~~~~~~~g~~-~~g~l~dr~~~~~~~ 274 (390)
T PRK03545 201 LFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQ-----QVAGLSENFATLLLLLFGGAGIIGSV-LFSRLGNRHPSGFLL 274 (390)
T ss_pred HHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HhcCCCccHHHHHHHHHHHHHHHHHH-HHHHHhhccchhHHH
Confidence 778888776655555544444444445554443 23688889999999999999999998 666677777776543
Q ss_pred HHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhcc
Q 013453 358 RIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPA 437 (442)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~ 437 (442)
.+..+.......+.... + ..+. .....++.+.......+.......+..| +.|+++.|+.+...++|..+||.
T Consensus 275 -~~~~~~~~~~~~l~~~~---~-~~~~-~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~ 347 (390)
T PRK03545 275 -IAIALLLVCLLLLLPAA---N-SEWH-LSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGAL 347 (390)
T ss_pred -HHHHHHHHHHHHHHHHh---c-hHHH-HHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333332222111 1 1222 2222333333333344555566667665 68899999999999999999999
Q ss_pred cCCC
Q 013453 438 GGGA 441 (442)
Q Consensus 438 i~G~ 441 (442)
+.|+
T Consensus 348 ~~G~ 351 (390)
T PRK03545 348 LGNQ 351 (390)
T ss_pred HHHH
Confidence 8875
No 13
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=100.00 E-value=1.2e-34 Score=248.28 Aligned_cols=364 Identities=38% Similarity=0.595 Sum_probs=263.5
Q ss_pred hhhchhHHHHHHHhcccccchh--hhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhccchH
Q 013453 58 SSLFPFLYFMIKDFQIAKREED--IGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNF 135 (442)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a~~~ 135 (442)
+...+......++|+.-..+.+ ...+.|.+.+.+.+.+.+.++.+|.++||+|||++++++++..++...+.+++.|+
T Consensus 42 ~~L~~~~~~~V~~F~~a~~~~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F 121 (451)
T KOG2615|consen 42 SSLYPFVVFMVRDFNIAIGEPDGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNF 121 (451)
T ss_pred cchhHHHHHhhHHHHHhhCCcccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445566666777766554444 56679999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcchhhHHHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCcccccccccCCcC
Q 013453 136 WMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPY 215 (442)
Q Consensus 136 ~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~ 215 (442)
..++++|++.|+..|...++.++++|.+++|+|+++++..+.+.++|.++||.+|+++.+.. ...+.+++
T Consensus 122 ~afv~aR~l~Gi~kgnl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~----------~~~g~~p~ 191 (451)
T KOG2615|consen 122 AAFVLARFLGGIFKGNLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFS----------SISGSYPF 191 (451)
T ss_pred HHHHHHHHhhhhccCchHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhH----------hhhccCch
Confidence 77777799999999999999999999999999999999999999999999999999998711 11225566
Q ss_pred hhHHHHHHHHHHH-HHHHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhcccccccccccccchhHHHHHHHHHH
Q 013453 216 FLPCLCISLFAFG-VTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVF 294 (442)
Q Consensus 216 ~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (442)
..|.++..+.+.. .....+++||+-+.++++++. .. ..+..+++++..+.........+||++..........+
T Consensus 192 alP~~~v~i~a~~~v~~~~~~lpETL~~rk~~~~~-~~----~~~~~~~~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~ 266 (451)
T KOG2615|consen 192 ALPCLLVFILAAGDVTFFPWFLPETLPLRKRNDEH-ST----LQEAADDRLALLKFARIFKVAALRNPPLLDFISVLRIF 266 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCccccchhhcccc-cc----hhhhhhhhhhhcchhhhhhhhhhcCccccchHHHHHHH
Confidence 6666655555555 455678899987655444111 11 11111111111111111223355666665555566666
Q ss_pred HHHHhhHHHHHHHHhcCCccc--CcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhH-HHHHHHHHHHHHHHHH
Q 013453 295 SLHDMAYSEIFSLWANSPKKL--GGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIM-VARIAGVLTIPLLTSY 371 (442)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 371 (442)
....+.+...++.|..+.... +++|+++.+.|.+++..++.+.+.+....+++.+..+... .+......+...++++
T Consensus 267 ~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~lll 346 (451)
T KOG2615|consen 267 GLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLL 346 (451)
T ss_pred HHHHHHHHHHHHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHH
Confidence 666666666676666555433 6799999999999999999999988877776665544322 3333333333333333
Q ss_pred HHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhcccCCCC
Q 013453 372 PYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGAL 442 (442)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i~G~l 442 (442)
... .....+.....+..+......+....++.+..|+++||+++|+..+.+.++.++||.+.|.+
T Consensus 347 s~~------~~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i 411 (451)
T KOG2615|consen 347 SLA------RTPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVI 411 (451)
T ss_pred hcc------ccchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhhee
Confidence 222 12234555555566667777888899999999999999999999999999999999999853
No 14
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=2.5e-33 Score=263.19 Aligned_cols=351 Identities=18% Similarity=0.133 Sum_probs=259.1
Q ss_pred CChhhHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHH
Q 013453 38 LPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (442)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~ 117 (442)
+++..+...++..+++.++.....+..|.+.+++|.++++ .+++.+.+.++..+++++.|+++||+|||+++..
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 85 (406)
T PRK11551 12 RLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQ------MGWAFSAGILGLLPGALLGGRLADRIGRKRILIV 85 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHH
Confidence 3344556677788888999999999999999999999999 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccc
Q 013453 118 GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (442)
Q Consensus 118 ~~~~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 196 (442)
+.++..++.++++++++++.+++.|++.|++.+...+ ..+++.|++|+++|++++++.+.+..+|..+++.+++.+.+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~- 164 (406)
T PRK11551 86 SVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAG- 164 (406)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-
Confidence 9999999999999999999999999999999888887 58999999999999999999999999999999999988876
Q ss_pred cccCCCcccccccccCCcChhHHHHHHHHHHHHH-HHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhccccccc
Q 013453 197 AEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPK 275 (442)
Q Consensus 197 ~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (442)
..+|+..+.+.+++.++.. +...++||++++.++++++.++. . ..
T Consensus 165 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~-----------------~~ 210 (406)
T PRK11551 165 ---------------DAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQRA--P-----------------VL 210 (406)
T ss_pred ---------------ccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhhh--h-----------------hH
Confidence 3445555566655544443 34556788765422211100000 0 00
Q ss_pred ccccc---cchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhc
Q 013453 276 KSLLK---NWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG 352 (442)
Q Consensus 276 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (442)
+..++ .+..+...+..++..........+.|.+.. +.|+++.+.+.......++.+++++ ..+++.||.+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~------~~g~s~~~~~~~~~~~~~~~~~~~~-~~g~l~dr~g 283 (406)
T PRK11551 211 RALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLV------GQGLSRSQAGLVQIAFNIGGALGSL-LIGALMDRLR 283 (406)
T ss_pred HHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH------hCCCChhhhhHHHHHHHHHHHHHHH-HHHHHHHHHh
Confidence 01111 122223333333333334444455665543 2588899999999999999999988 6666777889
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHH
Q 013453 353 PIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFK 432 (442)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 432 (442)
+++.+..+.....+++..+.... ..+. ..+..++.++...+..+....+..|.+|+++|+++.|+.+....+|.
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~ 357 (406)
T PRK11551 284 PRRVVLLIYAGILASLAALAAAP-----SFAG-MLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGS 357 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC-----cHHH-HHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHH
Confidence 88887776555555544433321 1122 22233333444445667778888999999999999999999999999
Q ss_pred hhhcccCCCC
Q 013453 433 AAGPAGGGAL 442 (442)
Q Consensus 433 ~~gp~i~G~l 442 (442)
.++|.+.|++
T Consensus 358 ~~g~~~~g~l 367 (406)
T PRK11551 358 MAGPLLAGQL 367 (406)
T ss_pred HHHhhhHhhh
Confidence 9999999864
No 15
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=100.00 E-value=2.1e-33 Score=270.12 Aligned_cols=370 Identities=14% Similarity=0.153 Sum_probs=273.1
Q ss_pred hHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHH
Q 013453 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (442)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~ 121 (442)
.+..+++..++..++.....+.+|.+.+++|.+.++ .+++.+.+.++..++.++.|+++||+|||++++.+.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 76 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQ------VQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFA 76 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhh------hhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHH
Confidence 345677788888899999999999999999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccC
Q 013453 122 VVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKY 200 (442)
Q Consensus 122 ~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~ 200 (442)
..++.+++++++|++.+++.|+++|++.+...+ ..+++.|++|+++|++++++...+..+|..+||.+++++.+
T Consensus 77 ~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~----- 151 (485)
T TIGR00711 77 FTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIE----- 151 (485)
T ss_pred HHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhcc-----
Confidence 999999999999999999999999999888887 59999999999999999999999999999999999999988
Q ss_pred CCcccccccccCCcChhHHHHHHHHHHHHH-HHHhhccccCCCCCCCCccchhhh---------hhhhh----hhhh---
Q 013453 201 PNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSY---------DALES----ASAE--- 263 (442)
Q Consensus 201 ~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~---------~~~~~----~~~~--- 263 (442)
..|||+.| ++.+.+.++.. +..+..||+++..+++.+...... ....+ ...+
T Consensus 152 --~~~w~~~f---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (485)
T TIGR00711 152 --NYHWRWIF---------LINVPIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNE 220 (485)
T ss_pred --CcCceehh---------hhhhHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchH
Confidence 56666555 55554444443 334456664432222111100000 00000 0000
Q ss_pred ----------------hhhhhcccccccccccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHH
Q 013453 264 ----------------VKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGE 327 (442)
Q Consensus 264 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (442)
.++.+++++....+++++|+++...+..++..........+.|.|+... +|+++.+.+.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-----~g~s~~~~g~ 295 (485)
T TIGR00711 221 ILILSITGLVAIIAFVVWELTDDNPLVDLRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQV-----LGYTALQAGL 295 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCccCHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHH
Confidence 0111122233345678899988888877777777777777788777643 6889999999
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhh
Q 013453 328 VLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFIL 407 (442)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (442)
......++.+++.+ +.+++.||.+||+....+..+..++..++.+.... +...+. ......+.+.+.....+.....
T Consensus 296 ~~~~~~~~~~~~~~-~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~l~g~g~~~~~~~~~~~ 372 (485)
T TIGR00711 296 HILPVGLAPMLSSP-IAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTP-DTPFLA-IALPQFIRGFGMGCFFMPLTTI 372 (485)
T ss_pred HHHHHHHHHHHHHH-HHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCC-CCCHHH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988 66667788899988888777666666554421111 111222 2222222333333334445555
Q ss_pred hcccCChhhhhHHHHHHHHHHHHHHhhhcccCCC
Q 013453 408 QNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGA 441 (442)
Q Consensus 408 ~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i~G~ 441 (442)
..+..|+++++++.|+.++.+++|+.+|+.+.|.
T Consensus 373 ~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ 406 (485)
T TIGR00711 373 ALSGLPPHKIARGSSLSNFTRQLGGSIGTALITT 406 (485)
T ss_pred HHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5667899999999999999999999999988764
No 16
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=1e-33 Score=267.50 Aligned_cols=360 Identities=15% Similarity=0.214 Sum_probs=254.2
Q ss_pred ChhhHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHH
Q 013453 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (442)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~ 118 (442)
+++.+...++..+.+.++.....+..|.+.+++|.++.+ .+++.+.+.+++.+++++.|+++||+|||+++.++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~------~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~ 89 (426)
T PRK12307 16 QKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDME------GAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWS 89 (426)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHH
Confidence 345566777888888899999999999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhcccc
Q 013453 119 TASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (442)
Q Consensus 119 ~~~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 197 (442)
.++.+++.++++++++++.+++.|+++|++.+...+ ...++.|++|+|+|+++.++...+.++|.++++.+.+.+.+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~-- 167 (426)
T PRK12307 90 IVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAE-- 167 (426)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcc--
Confidence 999999999999999999999999999999888777 58999999999999999999999999999999999988887
Q ss_pred ccCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhccccccccc
Q 013453 198 EKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKS 277 (442)
Q Consensus 198 ~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (442)
..| ||..+.+..+..++........||++++.+++.+.. .++.++..+......++
T Consensus 168 -----~~~---------w~~~f~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~ 223 (426)
T PRK12307 168 -----AYG---------WRAAFFVGLLPVLLVIYIRARAPESKEWEEAKLSGK----------GKHSQSAWSVFSLSMKG 223 (426)
T ss_pred -----cCC---------HHHHHHHHHHHHHHHHHHHHHCCCChHHHHhhhhcc----------ccccccchhhhhHHHHH
Confidence 344 444445543333322222223344432111100000 00000000011124566
Q ss_pred ccccchhHHHHHHHHHHHH---HHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchh
Q 013453 278 LLKNWPLMSSIIVYCVFSL---HDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPI 354 (442)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (442)
+++++.++........... .......++|.|... .|+++.+.+...+...++.+++++ ..+++.||++||
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~~~~~~~~g~~-~~g~l~dr~~~~ 296 (426)
T PRK12307 224 LFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAG------EGFDTGVVSNLMTAAAFGTVLGNI-VWGLCADRIGLK 296 (426)
T ss_pred HHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhccH
Confidence 7888877654443332222 222244556665542 478888999988888999999988 677778888998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhh
Q 013453 355 MVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAA 434 (442)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~ 434 (442)
+....+..+..+....+..... . ... ......+..+....+..+.....+.|.+|++.||++.|+.+...++++.+
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~--~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~ 372 (426)
T PRK12307 297 KTFSIGLLMSFLFIFPLFRIPQ--D-NYL-LLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTF 372 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHcc--c-cHH-HHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHH
Confidence 8887777666555443332211 1 111 11111111111112233445567789999999999999999999999999
Q ss_pred hcccCCC
Q 013453 435 GPAGGGA 441 (442)
Q Consensus 435 gp~i~G~ 441 (442)
+|.+.|+
T Consensus 373 gp~~~g~ 379 (426)
T PRK12307 373 NSMAATW 379 (426)
T ss_pred HHHHHHH
Confidence 9998775
No 17
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=3.2e-33 Score=263.65 Aligned_cols=358 Identities=13% Similarity=0.073 Sum_probs=239.1
Q ss_pred hhHHHHHHHHHHhHhcchhhchhHHHHHHHhcc---cccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHH
Q 013453 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQI---AKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (442)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~ 117 (442)
+.+...+++.+++.++...+....|.+.++++. +..+ ....+.+.+...++..++++++|+++||+|||+++..
T Consensus 22 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~ 98 (432)
T PRK10406 22 WAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQ---LLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLI 98 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHH
Confidence 334456677889999999999999999999863 3332 0013334455556666999999999999999999999
Q ss_pred HHHHHHHHHHHHhccchHH--------HHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHH
Q 013453 118 GTASVVIFNTLFGLSVNFW--------MAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPA 188 (442)
Q Consensus 118 ~~~~~~i~~~~~~~a~~~~--------~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 188 (442)
+.++++++++++++++++. .+++.|+++|++.|...| ..++++|++|+++|++..+..+.+...|..+++.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~ 178 (432)
T PRK10406 99 SVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALL 178 (432)
T ss_pred HHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998864 589999999999998888 5999999999999999999998888888888887
Q ss_pred hhhhhccccccCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhh
Q 013453 189 LGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEE 268 (442)
Q Consensus 189 ~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (442)
+...+..... ... ...++||.+|.+.++++++.......+||++++++++
T Consensus 179 ~~~~~~~~~~-------~~~-~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~~~~~~---------------------- 228 (432)
T PRK10406 179 VVVVLQQTLE-------DAE-LREWGWRIPFALGAVLAVVALWLRRQLDETSQQETRA---------------------- 228 (432)
T ss_pred HHHHHHHhCC-------HHH-HhccchHHHHHHHHHHHHHHHHHHhcCCCCchHHHhh----------------------
Confidence 7655542100 000 0035677777877777766555555566654321100
Q ss_pred cccccccccccccchhHHHHHHHHHH-HHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHH
Q 013453 269 GREATPKKSLLKNWPLMSSIIVYCVF-SLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFL 347 (442)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (442)
.++..+.++++|+++.+...+...+. ......+..+.|.|+.. .+|++..+.+.......+...+++. +.+++
T Consensus 229 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~-----~~g~s~~~~~~~~~i~~~~~~i~~~-~~G~l 302 (432)
T PRK10406 229 LKEAGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVN-----TAGMHANVASGIMTAALFVFMLIQP-LIGAL 302 (432)
T ss_pred hcccccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 00112456678888777655554433 44455566677776643 2578888888888887888888877 55678
Q ss_pred HHhhchhHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHH
Q 013453 348 ERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTG 427 (442)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 427 (442)
.||.+||+.......+..+....+........ .......+. ....+......+....+.+|.+|++.|+++.|+.+..
T Consensus 303 ~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~ 380 (432)
T PRK10406 303 SDKIGRRTSMLCFGSLAALFTVPILSALQNVS-SPYAAFGLV-MCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAV 380 (432)
T ss_pred HHHcCchHHHHHHHHHHHHHHHHHHHHHHcCC-cHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHH
Confidence 88889888776655443333221111111111 111111111 1111112222344667788999999999999999887
Q ss_pred HHH-HHhhhcccC
Q 013453 428 MSL-FKAAGPAGG 439 (442)
Q Consensus 428 ~~~-g~~~gp~i~ 439 (442)
.+. .+...|.+.
T Consensus 381 g~~~~g~~~p~~~ 393 (432)
T PRK10406 381 ANALFGGSAEYVA 393 (432)
T ss_pred HHHHHHhHHHHHH
Confidence 664 244455544
No 18
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=5.3e-33 Score=265.98 Aligned_cols=373 Identities=13% Similarity=0.071 Sum_probs=243.4
Q ss_pred hhHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHH-HHHHHHHHHHhhhhhhhhhhcccCCchhhHHHH
Q 013453 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGY-VGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (442)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~ 119 (442)
+.+...+++.+++.++...+....|.+.++++.+.++.. +....+ +.++..+++.++++++|+++||+|||+++.++.
T Consensus 16 ~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~ 94 (490)
T PRK10642 16 KAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSV-QMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITI 94 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 445567789999999999999999999999976554311 111111 257888999999999999999999999999999
Q ss_pred HHHHHHHHHHhccchHHH--------HHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhh
Q 013453 120 ASVVIFNTLFGLSVNFWM--------AVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG 190 (442)
Q Consensus 120 ~~~~i~~~~~~~a~~~~~--------l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 190 (442)
++++++++++++++|+++ +++.|+++|++.|...+ ..++++|++|+++|++..++...+..+|..+|+.+.
T Consensus 95 ~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~ 174 (490)
T PRK10642 95 VIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVV 174 (490)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999875 89999999999888877 599999999999999999999988888888888776
Q ss_pred hhhccccccCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhcc
Q 013453 191 GFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGR 270 (442)
Q Consensus 191 ~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (442)
..+...... .. ...++||.++++.++++++.++....+||+|++.+.+++.++. .++. .+++
T Consensus 175 ~~~~~~~~~-------~~-~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~~~--------~~~~--~~~~ 236 (490)
T PRK10642 175 VLISTIVGE-------AN-FLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQG--------DREG--LQDG 236 (490)
T ss_pred HHHHHhcCH-------HH-hcCccHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHhhhhh--------cccc--cccc
Confidence 655421100 00 0045677777777666665555566788887643211100000 0000 0001
Q ss_pred ccccccccccc-chhHH-HHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHH
Q 013453 271 EATPKKSLLKN-WPLMS-SIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLE 348 (442)
Q Consensus 271 ~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (442)
.+.++++++++ ++.+. .....++..........+.|.|+.. .+|++..+.+.......++.+++.+ +.+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~-----~~g~s~~~~~~~~~~~~~~~~~~~~-~~g~l~ 310 (490)
T PRK10642 237 PKVSFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSH-----NLHYSEDHGVLIIIAIMIGMLFVQP-VMGLLS 310 (490)
T ss_pred ccCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 12234445543 22222 2222233334455555677766643 2577777777777777777888877 677788
Q ss_pred HhhchhHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHH
Q 013453 349 RILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGM 428 (442)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 428 (442)
||+|||+.+..+.+...+.......... ...... +....++.++..............+.+|++.|+++.|+.+...
T Consensus 311 dr~grr~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~ 387 (490)
T PRK10642 311 DRFGRRPFVILGSVALFVLAIPAFILIN--SNVIGL-IFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNIS 387 (490)
T ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHh--CCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHH
Confidence 8889999877766543332222111111 111111 1111122222222233445566678899999999999876667
Q ss_pred HHHHhhhcccCCC
Q 013453 429 SLFKAAGPAGGGA 441 (442)
Q Consensus 429 ~~g~~~gp~i~G~ 441 (442)
.+++.++|.+.|+
T Consensus 388 ~~~g~~~p~i~g~ 400 (490)
T PRK10642 388 VLVAGLTPTLAAW 400 (490)
T ss_pred HHHHHHHHHHHHH
Confidence 7777888887664
No 19
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=2.7e-32 Score=253.66 Aligned_cols=343 Identities=18% Similarity=0.174 Sum_probs=244.4
Q ss_pred ChhhHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHH
Q 013453 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (442)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~ 118 (442)
.|+.++.+....+..........+.+|.+.+++|.++++ .++..+++.++..+++++.|+++||+|||++++.+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~ 91 (394)
T PRK10213 18 NWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGV------AGQSVTVTAFVAMFASLFITQTIQATDRRYVVILF 91 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHH
Confidence 455555555555555555556667889999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhcccc
Q 013453 119 TASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (442)
Q Consensus 119 ~~~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 197 (442)
.++.+++.++++++++++.+++.|+++|++.+...+ ..+++.|++|+|+|++++++...+.++|..++|.+++.+.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~-- 169 (394)
T PRK10213 92 AVLLTLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGE-- 169 (394)
T ss_pred HHHHHHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--
Confidence 999999999999999999999999999999888888 58999999999999999999999999999999999999998
Q ss_pred ccCCCcccccccccCCcChhHHHHHHHHHHHHHHH-HhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhcccccccc
Q 013453 198 EKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKK 276 (442)
Q Consensus 198 ~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (442)
.+| ||..+.+.+++.++..+. ...+||+++++++ .....+
T Consensus 170 -----~~g---------w~~~f~~~~~l~~~~~l~~~~~~p~~~~~~~~-------------------------~~~~~~ 210 (394)
T PRK10213 170 -----LIG---------WRNVFNAAAVMGVLCIFWIIKSLPSLPGEPSH-------------------------QKQNTF 210 (394)
T ss_pred -----hcC---------HHHHHHHHHHHHHHHHHHHHHHCCCCCccccc-------------------------chhHHH
Confidence 444 444446666555544332 3345664321100 001134
Q ss_pred cccccchhHHHHHHHHHHHHHHhhHHHHH-HHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhH
Q 013453 277 SLLKNWPLMSSIIVYCVFSLHDMAYSEIF-SLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIM 355 (442)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (442)
+.+++|.++...+..++..........+. |.+. +++|+++.+.+......+++.+++.. ..+++.||.+++.
T Consensus 211 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~~~g~s~~~~g~~~~~~~~~~iig~~-~~~~l~~r~~~~~ 283 (394)
T PRK10213 211 RLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYM------NLAGFGVDGLTLVLLSFGIASFVGTS-LSSFILKRSVKLA 283 (394)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HhcCCChhHHHHHHHHHHHHHHHHHH-HHHHHHhccchhH
Confidence 56788888876666555555444444444 3333 23588999999999999999999987 5566666644333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhh
Q 013453 356 VARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAG 435 (442)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g 435 (442)
............+.+..... ..+... ...++.+.......+...+.+.+..| ++++++.++.....++|..+|
T Consensus 284 l~~~~~~~~~~~~~l~~~~~-----~~~~~~-~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G 356 (394)
T PRK10213 284 LAGAPLVLAVSALVLTLWGS-----DKIVAT-GVAIIWGLTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCG 356 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhh-----hHHHHH-HHHHHHHHHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHH
Confidence 33332222222223222211 222222 23333344444555666667777777 557788888888889999999
Q ss_pred cccCCCC
Q 013453 436 PAGGGAL 442 (442)
Q Consensus 436 p~i~G~l 442 (442)
|.++|++
T Consensus 357 ~~l~G~l 363 (394)
T PRK10213 357 AAIGGYA 363 (394)
T ss_pred HHHHHHH
Confidence 9888753
No 20
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=4.4e-33 Score=259.17 Aligned_cols=337 Identities=12% Similarity=0.076 Sum_probs=245.6
Q ss_pred hHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhcc
Q 013453 53 TALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS 132 (442)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a 132 (442)
.........+..|.+.+++|.++.+ .|++.+++.+++.+++++.|+++||+|||+++..+.++.+++.++++++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~s~~~------~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~ 88 (377)
T TIGR00890 15 TSGYVYTWTLLAPPLGRYFGVGVTA------VAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIA 88 (377)
T ss_pred HhhHHhhhhhHHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHH
Confidence 3333556778899999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCccccccccc
Q 013453 133 VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFG 211 (442)
Q Consensus 133 ~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~ 211 (442)
++++.+++.|++.|++.+...+ ....+.|++| |+|+++.++...+.++|..+++++.+.+.+
T Consensus 89 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---------------- 151 (377)
T TIGR00890 89 DSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVIN---------------- 151 (377)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHh----------------
Confidence 9999999999999999887766 5778888887 679999999999999999887777777765
Q ss_pred CCcChhHHHHHHHHHHHHHHH-HhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhcccccccccccccchhHHHHHH
Q 013453 212 KFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIV 290 (442)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (442)
..+||..+.+.++..++..+. .++++|++++..+++++.+ +.....++.++++.++...+.
T Consensus 152 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~ 213 (377)
T TIGR00890 152 LEGVPAAFIYMGIIFLLVIVLGAFLIGYPPGQLIKTNIEVS------------------VKDYTVWEMLRTPQFWVLYLS 213 (377)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHheecCchhccccCcccc------------------hhhhhHHHHHcCccHHHHHHH
Confidence 344555557777766665443 4445554332111110000 001123456788888776666
Q ss_pred HHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHHHHHHHHHH
Q 013453 291 YCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTS 370 (442)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (442)
.++..........+.+.+. ++++.+..+.+.......++.+++++ ..+++.||++||+.+..+.....++...
T Consensus 214 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~l~dr~g~~~~~~~~~~~~~~~~~~ 286 (377)
T TIGR00890 214 FFLNAVSGLLLIGLYKPYG------QSLGLSDGFLVLAVSISSIFNGGGRP-FLGALSDKIGRQKTMSIVFGISAVGMAA 286 (377)
T ss_pred HHHHhHHHHHHHHHHHHHH------HHcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhhhhhhHHHHHHHHHHHH
Confidence 5555444444444444432 23577888889999999999999988 6677778889998888777777666655
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhcccCCC
Q 013453 371 YPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGA 441 (442)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i~G~ 441 (442)
+...... .... ........+.......+....+..|.+|+++|+++.|+.+...++|..++|.+.|.
T Consensus 287 ~~~~~~~---~~~~-~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~ 353 (377)
T TIGR00890 287 MLFIPML---NDVL-FLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASH 353 (377)
T ss_pred HHHcccc---hhHH-HHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHH
Confidence 5443211 1111 11111222222223344556778899999999999999999999999999988764
No 21
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=100.00 E-value=2e-33 Score=261.64 Aligned_cols=362 Identities=15% Similarity=0.118 Sum_probs=251.9
Q ss_pred HHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHH
Q 013453 49 IVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTL 128 (442)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~ 128 (442)
..+..........+..|.+.+++|.+..+ .+++.+++.++..+++++.|+++||+|||+++..+.++..++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 76 (379)
T TIGR00881 3 GYAAYYLVRKNFALAMPYLVEEIGLSKTD------LGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLF 76 (379)
T ss_pred hhhHHHHhHHhhhhhhHHHHHHhCCCHhH------HHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHH
Confidence 34566677788888999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHH-HhhhhhccccccCCCcccc
Q 013453 129 FGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGP-ALGGFLAQPAEKYPNLFSS 206 (442)
Q Consensus 129 ~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~-~~~~~l~~~~~~~~~~~gw 206 (442)
++++++++.+++.|++.|++.+...+ ..+++.|++|+++|++++++.+.+..+|..++| .+++.+.+ ..+
T Consensus 77 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------~~~- 148 (379)
T TIGR00881 77 FGFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAE-------LYS- 148 (379)
T ss_pred HHHhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHh-------cCC-
Confidence 99999999999999999999888877 589999999999999999999999999999999 56666665 334
Q ss_pred cccccCCcChhHHHHHHHHHHHH-HHHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhcccccccccccccchhH
Q 013453 207 ESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLM 285 (442)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (442)
|+..+.+.+++.++. ++..++.||+++..+.++++++.. ++.++..++.+++.++.+...++++++|.++
T Consensus 149 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (379)
T TIGR00881 149 --------WHWVFIVPGIIAIIVSLICFLLLRDSPQSCGLPPAEEMPN-EEPDGDAEKKEEELTKKQIFLQYVLLNKVLW 219 (379)
T ss_pred --------chhHHHHHHHHHHHHHHHHheeeCCCccccccCccccCcc-cccccccccccccccchHHHHHHHHhcchHH
Confidence 444446666555444 444556676654322211111100 0000000000011111122345677888888
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhh-chhHHHHHHHHHH
Q 013453 286 SSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL-GPIMVARIAGVLT 364 (442)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 364 (442)
...+..++..........+.+.|..+ .+|+++.+.+.......++.+++.+ +..++.||. ++++.........
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~~~~-~~g~l~~r~~~~~~~~~~~~~~~ 293 (379)
T TIGR00881 220 YISLGYVFVYVVRTGILDWSPLYLTQ-----EKGFSKEKASWAFTLYELGGLVGTL-LAGWLSDKLFNGRRGPLAVFFMA 293 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-----HhCCCHHHHHHHHHHHHHHcchhHH-HHHHHHHHHcCCcchHHHHHHHH
Confidence 88877777777777777777777653 3688999999999999999999988 555555543 3333222111111
Q ss_pred HHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhcccCCC
Q 013453 365 IPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGA 441 (442)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i~G~ 441 (442)
.....+...... .. ..........+..+....+..+.......|..|++.|+++.|+.+...++|+.++|.+.|.
T Consensus 294 ~~~~~~~~~~~~-~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~ 368 (379)
T TIGR00881 294 LIIVSLLVYWLN-PA-ANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGY 368 (379)
T ss_pred HHHHHHHHHhcC-cc-hhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHH
Confidence 111111111110 01 1111122222223333334445556778899999999999999999999999999998875
No 22
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=100.00 E-value=1.6e-32 Score=252.94 Aligned_cols=346 Identities=25% Similarity=0.362 Sum_probs=255.5
Q ss_pred HHHHHHhHhcchhhchhHH-HHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHH
Q 013453 47 WIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIF 125 (442)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~ 125 (442)
++..++..++.....+.+| .+.+++|.+..+ .+++.+++.++..+++++.|+++||+|||+++..+.++.+++
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~ 75 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQ------IGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALG 75 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHC------HHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhH
Confidence 5667788888888999999 889999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCcc
Q 013453 126 NTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLF 204 (442)
Q Consensus 126 ~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~ 204 (442)
.++..++++.+.+++.|++.|++.+...+ ..+++.|++|+++|++++++.+.+.++|.+++|.+++.+.+ ..
T Consensus 76 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~-------~~ 148 (352)
T PF07690_consen 76 SLLLAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLIS-------YF 148 (352)
T ss_dssp HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------HC
T ss_pred HHHhhhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhh-------cc
Confidence 76666768888999999999999988888 59999999999999999999999999999999999999997 44
Q ss_pred cccccccCCcChhHHHHHHHHHHHHHHH-HhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhccccc-ccccccccc
Q 013453 205 SSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREAT-PKKSLLKNW 282 (442)
Q Consensus 205 gw~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 282 (442)
|| +..+.+.+++.++..+. ..++++++++++.+++++++ ++++++.. .++.+++++
T Consensus 149 ~~---------~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~ 206 (352)
T PF07690_consen 149 GW---------RWAFLISAILSLIAAILFILFLPEPPPPRERESPKESE-------------SKKPKPLKPGFKSLFKNP 206 (352)
T ss_dssp HH---------CCHHHHHHHHHHHHHHHHHCCC---STTTT--SSTTTT---------------HHHCCCH-CTHHHHHH
T ss_pred cc---------ccccccccchhhhhhhhHhhhhhhcccccccccccccc-------------cccccccccccccccccc
Confidence 44 44447777777666543 35555555443332221110 00111122 366677777
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCC-hhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHH
Q 013453 283 PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYS-TQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAG 361 (442)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (442)
.+|...+..++..........+.+.|.. +.+|++ ..+.+......++...++.. +.+++.||.++++......
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~ 280 (352)
T PF07690_consen 207 VLWILLIAFFLFFFVFSGFSFFLPLYLQ-----EVLGFSGPSQAGLLFSIFGIVGIIGSL-LAGRLSDRFGRRRRLLIAI 280 (352)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHCC-----HHHHCCTHHHHHHHHHHHHHHHHHHHH-HHHHHHHHTTCHHHHHHHH
T ss_pred hhhhhhhhhhHHHHHHHHhhcccchhhh-----hccCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHcCcHHHHHHHH
Confidence 7775555555555566666677776643 336888 78999999999999999888 5555667777766665555
Q ss_pred HHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhc
Q 013453 362 VLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGP 436 (442)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp 436 (442)
....+....+....... ...+ ......+.+.......+....+..+..|++++|++.|+.++..++|+.+||
T Consensus 281 ~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 281 LLLILGALGLLLLPFSS-SPVW--LIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHCCSHHHC-HHHH--HHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhh-hHHH--HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 55555444443332221 1111 222333344455556788899999999999999999999999999999987
No 23
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=100.00 E-value=9.8e-32 Score=250.85 Aligned_cols=349 Identities=16% Similarity=0.133 Sum_probs=255.6
Q ss_pred hhHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHH
Q 013453 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (442)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~ 120 (442)
+..+.+....++...+.....+..|.+.+++|.++++ .+++.+.+.++..+++++.|+++||+|||+++..+.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~ 78 (385)
T TIGR00710 5 AFALLLGCLSILGPLGIDMYLPAFPEIAADLSTPASI------VQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLF 78 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHH
Confidence 3444555556667778888899999999999999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhcccccc
Q 013453 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (442)
Q Consensus 121 ~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 199 (442)
+..++.++++++++++.+++.|++.|++.+...+ ..+++.|++|+++|++++++.+....+|..++|.+++.+.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~---- 154 (385)
T TIGR00710 79 IFALSSLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILV---- 154 (385)
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----
Confidence 9999999999999999999999999999888877 59999999999999999999999999999999999999987
Q ss_pred CCCcccccccccCCcChhHHHHHHHHHHHHHH-HHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhcccccccccc
Q 013453 200 YPNLFSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSL 278 (442)
Q Consensus 200 ~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (442)
..+|+..+.+.++..++..+ ..+..||+++.+++++ .++ ..+..++.
T Consensus 155 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~------------------~~~~~~~~ 202 (385)
T TIGR00710 155 ------------WLSWHAIFAFLSLAGILLSALIFFILPETLPYEARIQ--IST------------------YFETFLLL 202 (385)
T ss_pred ------------HcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcccCC--HHH------------------HHHHHHHH
Confidence 34455555666665555443 3445666543321110 000 01124556
Q ss_pred cccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHH
Q 013453 279 LKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVAR 358 (442)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (442)
+++|+++...+...+..........+.|.++. +.+|+++.+.+.+.....++.+++.+ ..+++.||.++++...
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~g~~~~~~g~~~~~~~~~~~~~~~-~~g~l~~~~~~~~~~~ 276 (385)
T TIGR00710 203 LKSKMFWGYALIYGASFGGFFAFFSGAPFVYI-----DIMGVSPSVFGLLFALNIIAMIFGGF-LNGRFIKKWGAKSLLR 276 (385)
T ss_pred HcCchhHHHHHHHHHHHHHHHHHHHcChHHHH-----HHcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCHHHHHH
Confidence 78888877766665555555555445555443 23688999999999998999999988 6666777889888887
Q ss_pred HHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhccc
Q 013453 359 IAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAG 438 (442)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i 438 (442)
.+.....+...++........ ..+........+.+.......+.......|..| ++++++.++.+.....++.+.+.+
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~ 354 (385)
T TIGR00710 277 MGLILFAVSAVLLEITAILGL-GSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYL 354 (385)
T ss_pred HHHHHHHHHHHHHHHHHHhcc-chHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHH
Confidence 776666666555444322111 122222222333333344455666666777666 689999999998887655554444
Q ss_pred C
Q 013453 439 G 439 (442)
Q Consensus 439 ~ 439 (442)
.
T Consensus 355 ~ 355 (385)
T TIGR00710 355 V 355 (385)
T ss_pred H
Confidence 3
No 24
>PRK10504 putative transporter; Provisional
Probab=100.00 E-value=8.9e-32 Score=257.43 Aligned_cols=370 Identities=15% Similarity=0.124 Sum_probs=267.8
Q ss_pred hhhHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHH
Q 013453 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (442)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~ 119 (442)
.+.++.+++..++..++.....+.+|.+.+++|.+..+ .+++.+.+.++..++.+++|+++||+|||++++.+.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~------~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~ 82 (471)
T PRK10504 9 RWQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLH------MHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAI 82 (471)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHH
Confidence 44567788888888989899999999999999999998 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccc
Q 013453 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (442)
Q Consensus 120 ~~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 198 (442)
++.+++.++++++++++.+++.|+++|++.+...| ..+++.|++|+++|+++.+......++|..+||.+++.+.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~--- 159 (471)
T PRK10504 83 VLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVE--- 159 (471)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh---
Confidence 99999999999999999999999999999998888 58899999999999999999999999999999999999998
Q ss_pred cCCCcccccccccCCcChhHHHHHHHHHHHHHH-HHhhccccCCCCCCCCccchhhhh---------hhhhhhh------
Q 013453 199 KYPNLFSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYD---------ALESASA------ 262 (442)
Q Consensus 199 ~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~---------~~~~~~~------ 262 (442)
..|| +..+.+......+..+ .....|+.+.... +.+....... ..+....
T Consensus 160 ----~~gw---------~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (471)
T PRK10504 160 ----YASW---------HWIFLINIPVGIIGAIATLMLMPNYTMQTR-RFDLSGFLLLAVGMATLTLALDGSKGLGLSPL 225 (471)
T ss_pred ----hccH---------HHHHHHHHHHHHHHHHHHHHhCCCccccCC-CCChHHHHHHHHHHHHHHHHHhcCCcCCcchH
Confidence 3444 4444665554444433 3344454332211 1111000000 0000000
Q ss_pred ----------------hhhhhhcccccccccccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHH
Q 013453 263 ----------------EVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVG 326 (442)
Q Consensus 263 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (442)
..+++..+++....+++|||+++...+..++..........+.|.|... ..|.++.+.+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~g~~~~~~g 300 (471)
T PRK10504 226 AIAGLVAVGVVALLLYLLHARNNNRALFSLKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQI-----GLGFSPFHAG 300 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HcCCCHHHHH
Confidence 0011111122223457899998888777777766665555666666543 2588899999
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhh
Q 013453 327 EVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFI 406 (442)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (442)
+......++.+++.. +.+++.||+++|+.+..+..+..+...++.+..... ..+. ........+.......+....
T Consensus 301 ~~~~~~~~~~~~~~~-~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~g~~~~~~~~~~~~ 376 (471)
T PRK10504 301 LMMIPMVLGSMGMKR-IVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLG--WYYL-LPFVLFLQGMVNSTRFSSMNT 376 (471)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccc--cHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 998888888877777 566677888999988887776666655544432111 1111 111222222333344556667
Q ss_pred hhcccCChhhhhHHHHHHHHHHHHHHhhhcccCCC
Q 013453 407 LQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGA 441 (442)
Q Consensus 407 ~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i~G~ 441 (442)
...+.+|++.+++++|+.++...+|..+||.+.|.
T Consensus 377 ~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ 411 (471)
T PRK10504 377 LTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGL 411 (471)
T ss_pred HHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHH
Confidence 77788999999999999999999999999988774
No 25
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=8.9e-32 Score=250.49 Aligned_cols=325 Identities=12% Similarity=0.039 Sum_probs=239.1
Q ss_pred hhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhccchHHH
Q 013453 58 SSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWM 137 (442)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a~~~~~ 137 (442)
....+.+|.+.+|+|.|.++ .+++.+.+.+++.+++++.|+++||+|||+++..+..+++++.+++++++|++.
T Consensus 26 ~~~~~~lp~i~~~~~~s~~~------~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ 99 (393)
T PRK09705 26 TSVGPLLPQLRQASGMSFSV------AALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSAL 99 (393)
T ss_pred hccchhHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHH
Confidence 66779999999999999999 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCcccccccccCCcCh
Q 013453 138 AVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYF 216 (442)
Q Consensus 138 l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~ 216 (442)
+++.|+++|++.+...+ ...++.|++| ++|+++++.+..+..+|..+++.+++++.+. ..+||+
T Consensus 100 ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~------~~~w~~-------- 164 (393)
T PRK09705 100 LLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQH------SETWYQ-------- 164 (393)
T ss_pred HHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHh------cCCHHH--------
Confidence 99999999999998877 4888999987 7899999999999999999999999988861 124443
Q ss_pred hHHHHHHHHHHHHHHHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhcccccccccccccchhHHHHHHHHHHHH
Q 013453 217 LPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSL 296 (442)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (442)
.+...++..++.....+...+.+++.+++ ++...++.+++++.+...+..++...
T Consensus 165 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~l~~~~~~~l~~~~~~~~~ 219 (393)
T PRK09705 165 -TLAWWALPAVVALFAWWWQSAREVASSHK------------------------TTTTPVRVVFTPRAWTLGVYFGLING 219 (393)
T ss_pred -HHHHHHHHHHHHHHHHHHHhcCCCccccC------------------------CCcCCcccccCHhHHHHHHHHHHHHH
Confidence 33433333333333222222111110000 00112345677777776666666666
Q ss_pred HHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHH
Q 013453 297 HDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAM 376 (442)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (442)
.......+.|.++.+ +|++..+++...+..+++.+++++ ..+++.||.++++....+..+..++..++...+.
T Consensus 220 ~~~~~~~~lp~~l~~------~g~s~~~ag~~~~~~~i~~i~g~~-~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~ 292 (393)
T PRK09705 220 GYASLIAWLPAFYIE------IGASAQYSGSLLALMTLGQAAGAL-LMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPL 292 (393)
T ss_pred HHHHHHHHHHHHHHH------cCCChhhhhHHHHHHHHHHHHHHH-HHHHHHhhccchHHHHHHHHHHHHHHHHHHHccc
Confidence 666677777777642 588999999999999999999998 6777888889988888777666665554433221
Q ss_pred hhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccC-ChhhhhHHHHHHHHHHHHHHhhhcccCCCC
Q 013453 377 LSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAV-DQDQRGAANGIAMTGMSLFKAAGPAGGGAL 442 (442)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~g~~~gp~i~G~l 442 (442)
. .......+ .+.......+.......+.. |++++++..|+.+...+++..++|.+.|++
T Consensus 293 --~-~~~~~~~l----~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l 352 (393)
T PRK09705 293 --Q-LPVLWAMV----CGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVL 352 (393)
T ss_pred --h-HHHHHHHH----HHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 11111111 11222233344444444545 568899999999999999999999988753
No 26
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=9.1e-32 Score=253.74 Aligned_cols=367 Identities=14% Similarity=0.097 Sum_probs=239.2
Q ss_pred hhhHHHHHHHHHHhHhcchhhchhHHH-HHHHh--cccccchhhhhH-HHHHHHHHHHHHHhhhhhhhhhhcccCCchhh
Q 013453 40 ITELFSIWIIVLCTALPISSLFPFLYF-MIKDF--QIAKREEDIGSY-AGYVGSSFMFGRALTSVFWGLVADRYGRKPVI 115 (442)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~-~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~ 115 (442)
++.+....+..+++.++...+....|. +.+++ +.++.+ +.. .....++..+++.+++++.|+++||+|||+++
T Consensus 21 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l 97 (438)
T PRK09952 21 RRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAM---GTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRML 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHH---HHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHH
Confidence 344556677888899998888877775 45555 455432 111 11223456677889999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccchHH--------HHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHH
Q 013453 116 IMGTASVVIFNTLFGLSVNFW--------MAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIG 186 (442)
Q Consensus 116 ~~~~~~~~i~~~~~~~a~~~~--------~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g 186 (442)
..+.++++++++++++++++. .+++.|+++|++.|...+ +..++.|++|+|+|++..+..+.+..+|..++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~ 177 (438)
T PRK09952 98 MLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLS 177 (438)
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 999999999999999999987 588999999999998887 58999999999999999999999999999998
Q ss_pred HHhhhhhccccccCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhh
Q 013453 187 PALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKE 266 (442)
Q Consensus 187 ~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (442)
+.+...+...... ..+..++||.++.+.+++.++........||+|++.+.+++.++
T Consensus 178 ~~~~~~l~~~~~~--------~~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~~~~~~--------------- 234 (438)
T PRK09952 178 TGLVSLISMMTTD--------EQFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHEQAA--------------- 234 (438)
T ss_pred HHHHHHHHHhCCH--------HHhhccChHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHhhccc---------------
Confidence 8877776531110 00114567777787776665544444456676543211100000
Q ss_pred hhcccccccccccccchhHHHHH-HHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHH
Q 013453 267 EEGREATPKKSLLKNWPLMSSII-VYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYP 345 (442)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (442)
.+ ++....+.++++|+.+.... ..++..........+.+.|... .+|++...........++...++.+ +.+
T Consensus 235 ~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~-----~~g~s~~~~~~~~~~~g~~~~i~~~-~~g 307 (438)
T PRK09952 235 AK-KRIPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQ-----NLGLPRELFLNIGLLVGGLSCLTIP-CFA 307 (438)
T ss_pred cc-ccCCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 00 00011123556666655443 3333344444555666666543 2567776555555555666677766 667
Q ss_pred HHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHH
Q 013453 346 FLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAM 425 (442)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 425 (442)
++.||++||+....+.++..++...+...... ....+. .....++.++......+..+.+..|.+|++.|+++.|+.+
T Consensus 308 ~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~ 385 (438)
T PRK09952 308 WLADRFGRRRVYITGALIGTLSAFPFFMALEA-QSIFWI-VFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGY 385 (438)
T ss_pred HHHHHhCchHHHHHHHHHHHHHHHHHHHHHHc-CChHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHH
Confidence 88888899988777765554433322221111 111122 2222222233333445667888999999999999999976
Q ss_pred HHHH-HHHhhhcccCCC
Q 013453 426 TGMS-LFKAAGPAGGGA 441 (442)
Q Consensus 426 ~~~~-~g~~~gp~i~G~ 441 (442)
.... +++.++|.+.|+
T Consensus 386 ~~~~~lgg~~~p~i~g~ 402 (438)
T PRK09952 386 QVASVVGGGFTPFIAAA 402 (438)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 6654 888999988764
No 27
>PRK10133 L-fucose transporter; Provisional
Probab=100.00 E-value=6.2e-32 Score=253.89 Aligned_cols=362 Identities=14% Similarity=0.109 Sum_probs=261.7
Q ss_pred hhhHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHH
Q 013453 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (442)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~ 119 (442)
...+..+.+..++..+......+..|.+++++|.++.+ .|++.+.+.+++.+++++.|++.||+|||+++..+.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~------~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~ 98 (438)
T PRK10133 25 IIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQ------AGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGL 98 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 34556677777888888888999999999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH---hccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhcc
Q 013453 120 ASVVIFNTLF---GLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 120 ~~~~i~~~~~---~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (442)
+++.++.+++ .++++++.++++|+++|+|.|...+ .++++.|+.++++|.+.+++.+....+|..++|.+++.+..
T Consensus 99 ~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~ 178 (438)
T PRK10133 99 FLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLIL 178 (438)
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999875 5689999999999999999999888 58889998777777778999999999999999999887652
Q ss_pred cccc-----------CCCcccccccccCCcChhHHHHHHH-HHHHHHHH-HhhccccCCCCCCCCccchhhhhhhhhhhh
Q 013453 196 PAEK-----------YPNLFSSESLFGKFPYFLPCLCISL-FAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASA 262 (442)
Q Consensus 196 ~~~~-----------~~~~~gw~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 262 (442)
.... .....+||+.+ ..+||.++..... ..++..+. ....||.+.++ +++ .+
T Consensus 179 ~~~~~~~~~~~~~l~~~~~~~w~~~~-~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~--~~~-~~----------- 243 (438)
T PRK10133 179 SNVPHQSQDVLDKMTPEQLSAYKHSL-VLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDN--HSD-AK----------- 243 (438)
T ss_pred cCCcccchhhhhccChhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc--ccc-cc-----------
Confidence 1100 00012566655 4568887764333 32222222 23344422110 000 00
Q ss_pred hhhhhhcccccccccccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhh
Q 013453 263 EVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLS 342 (442)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (442)
+.+.....++++++|.++...+..+++.....+...+.+.|+. ++.+|+++.+++.......++.+++++
T Consensus 244 -----~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~----~~~~g~s~~~ag~~~~~~~~~~~vG~~- 313 (438)
T PRK10133 244 -----QGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAV----EEIPGMTAGFAANYLTGTMVCFFIGRF- 313 (438)
T ss_pred -----ccchhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHh----hhcCCCCHHHHHHHHHHHHHHHHHHHH-
Confidence 0001223457788998887777666666666666666665642 133699999999999999999999998
Q ss_pred HHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHH
Q 013453 343 LYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANG 422 (442)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g 422 (442)
..+++.||+++++.+..+..+..+.+.+..+.. . .+ ........+++.....|..++...+..|+ +.+++.+
T Consensus 314 ~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~---~--~~--~~~~~~l~glg~~~i~P~~~s~a~~~~~~-~~~~as~ 385 (438)
T PRK10133 314 TGTWLISRFAPHKVLAAYALIAMALCLISAFAG---G--HV--GLIALTLCSAFMSIQYPTIFSLGIKNLGQ-DTKYGSS 385 (438)
T ss_pred HHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcC---C--hH--HHHHHHHHHHHHHHHHHHHHHHHHcccch-hhccchh
Confidence 777788888999888887766665554443321 1 11 12223334556677888888888887764 5778888
Q ss_pred HHHHHHHHHHhhhcccCCC
Q 013453 423 IAMTGMSLFKAAGPAGGGA 441 (442)
Q Consensus 423 ~~~~~~~~g~~~gp~i~G~ 441 (442)
+..+ ..+|+.++|.+.|.
T Consensus 386 l~~~-~~~g~~~~~~i~G~ 403 (438)
T PRK10133 386 FIVM-TIIGGGIVTPVMGF 403 (438)
T ss_pred HHhH-HhccchHHHHHHHH
Confidence 8764 55778888877664
No 28
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=3e-32 Score=261.74 Aligned_cols=385 Identities=14% Similarity=0.080 Sum_probs=247.5
Q ss_pred hhHHHHHHHHHHhHhcchhhchhHHHHHHHhc-----ccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhh
Q 013453 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQ-----IAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVI 115 (442)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~ 115 (442)
+....+.++.+.++++...+....|.+.+++. .+..+ .+++.+.+.+++.++++++|+++||+|||+++
T Consensus 16 ~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~ 89 (502)
T TIGR00887 16 RAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSV------SAAVNGSASIGTLAGQLFFGWLADKLGRKRVY 89 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHH------HHHHHHHHHHHHHHHHHHHHHHHHhhccHHHH
Confidence 34446777888899999889988888876531 22333 78999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccch------HHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHH
Q 013453 116 IMGTASVVIFNTLFGLSVN------FWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPA 188 (442)
Q Consensus 116 ~~~~~~~~i~~~~~~~a~~------~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 188 (442)
.++.+++.++.++++++++ ++.++++|+++|++.|...+ ...++.|++|+++|++++++.+....+|..+++.
T Consensus 90 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~ 169 (502)
T TIGR00887 90 GMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAI 169 (502)
T ss_pred HHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999888765 78999999999999998877 6999999999999999999999999999999999
Q ss_pred hhhhhccccccC-CCccc-----ccc--cccCCcChhHHHHHHHHHHHHHHHHhhccccCCCCCCCCccch---hhhhhh
Q 013453 189 LGGFLAQPAEKY-PNLFS-----SES--LFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCD---VSYDAL 257 (442)
Q Consensus 189 ~~~~l~~~~~~~-~~~~g-----w~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~---~~~~~~ 257 (442)
++..+....... ....+ ++. .. .++||.++.+.++++++.++..+++||+|++...++++++ +...+.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~ 248 (502)
T TIGR00887 170 VALIVLAGFKHSLEAAADEASCTGSCVPAV-DYMWRILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAASDMSAV 248 (502)
T ss_pred HHHHHHHHhccccccccccccccccccchh-cccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHHH
Confidence 988765321100 00000 000 11 3578888888888888777778899999997433222211 111111
Q ss_pred hhhh-h-hhh---h---hhcccccccccccccc---hhHHHHHH-H---HHHHHHHhhHHHHHHHHhcCCcccCcccCCh
Q 013453 258 ESAS-A-EVK---E---EEGREATPKKSLLKNW---PLMSSIIV-Y---CVFSLHDMAYSEIFSLWANSPKKLGGLNYST 322 (442)
Q Consensus 258 ~~~~-~-~~~---~---~~~~~~~~~~~~~~~~---~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (442)
.+.. + +.+ + +++....+++++++++ +.+...+. . +......++...+.|.++. +.|++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~------~~G~~~ 322 (502)
T TIGR00887 249 LQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILS------AIGYSP 322 (502)
T ss_pred hccccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHH------HHcCCC
Confidence 1100 0 000 0 0011112455666532 22122111 1 1111122222222333332 234443
Q ss_pred hHHH-----------H-HHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHH
Q 013453 323 QMVG-----------E-VLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCAS 390 (442)
Q Consensus 323 ~~~~-----------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (442)
.+.+ . ......++.+++.+ +..++.||.|||+.+..+..+..+++.++............ .....
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~-~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~ 399 (502)
T TIGR00887 323 PAATNNAYEELYKTAVGNLIIALAGTVPGYW-VTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTHGF--LAIYV 399 (502)
T ss_pred CccchhHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcchhHH--HHHHH
Confidence 2111 1 12223344455555 67778889999998888777666665555443211111111 11111
Q ss_pred HHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhcccCCC
Q 013453 391 VVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGA 441 (442)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i~G~ 441 (442)
+...++..+..+..+.+.+|.+|++.|+++.|+.+.++.++++++|.+.|+
T Consensus 400 ~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~ 450 (502)
T TIGR00887 400 LAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLY 450 (502)
T ss_pred HHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhh
Confidence 111122333455667778999999999999999999999999999988765
No 29
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=2.6e-31 Score=246.87 Aligned_cols=341 Identities=17% Similarity=0.209 Sum_probs=243.8
Q ss_pred hhHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHH
Q 013453 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (442)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~ 120 (442)
+.++.+....++.........+.+|.+.+|+|.+..+ .|++.+.+.+++.++++++|+++||+|||+++..+.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~------~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 76 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPA------AGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVA 76 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHH------HhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHH
Confidence 3456677788888888889999999999999999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhcccccc
Q 013453 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (442)
Q Consensus 121 ~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 199 (442)
+.+++.+++++++|++.+++.|+++|++.+...+ ...++.|++++++|++++++...+..+|..++|.+++.+.+
T Consensus 77 ~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~---- 152 (382)
T PRK10091 77 LCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQ---- 152 (382)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhh----
Confidence 9999999999999999999999999999888777 48889999999999999999999999999999999999987
Q ss_pred CCCcccccccccCCcChhHHHHHHHHHHHHHH-HHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhcccccccccc
Q 013453 200 YPNLFSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSL 278 (442)
Q Consensus 200 ~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (442)
..+||..+.+.++..++..+ ..+++||.+++.+ .+ .+ ...+.
T Consensus 153 ------------~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~~~~--~~-~~----------------------~~~~~ 195 (382)
T PRK10091 153 ------------EFSWRYTFLLIAVFNIAVLASIYFWVPDIRDEAK--GG-LR----------------------EQFHF 195 (382)
T ss_pred ------------hccHHHHHHHHHHHHHHHHHHHHHhCCCCCcccc--cC-HH----------------------HHHHH
Confidence 33455555666665555433 3455777532110 00 00 00124
Q ss_pred cccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHH
Q 013453 279 LKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVAR 358 (442)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (442)
++++..+.......+..........+.+.++. +.+|+++.+.+.+....+++.+++++ ..+++.||.++++...
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~g~s~~~~~~~~~~~~~~~~ig~~-~~g~l~~r~~~~~~~~ 269 (382)
T PRK10091 196 LRSPAPWLIFAATMFGNAGVFAWFSYIKPYMM-----FISGFSETSMTFIMMLVGLGMVLGNL-LSGRLSGRYSPLRIAA 269 (382)
T ss_pred hcChHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HhcCCCHHHHHHHHHHHHHHHHHHhH-HHheeccccCchhHHH
Confidence 56666665544444333333333333343333 23688999999999999999999998 6667788888888887
Q ss_pred HHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHH-hhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhcc
Q 013453 359 IAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIIT-GLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPA 437 (442)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~ 437 (442)
.+..+..++..++..... ..+........ .+....+..+ .......+..|++.++.+. .+...++|.++||.
T Consensus 270 ~~~~~~~i~~~~~~~~~~----~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~Gp~ 342 (382)
T PRK10091 270 VTDFIIVLALLMLFFFGG----MKTASLIFAFI-CCAGLFALSAPLQILLLQNAKGGELLGAAG--GQIAFNLGSAIGAY 342 (382)
T ss_pred HHHHHHHHHHHHHHHHHh----hHHHHHHHHHH-HHHHHHhhhHHHHHHHHHhCCcchHHHHHH--HHHHHHHHHHHHHH
Confidence 777666665544433221 11111111111 1111122222 2233444445556666553 46778899999999
Q ss_pred cCCC
Q 013453 438 GGGA 441 (442)
Q Consensus 438 i~G~ 441 (442)
++|+
T Consensus 343 ~~G~ 346 (382)
T PRK10091 343 CGGM 346 (382)
T ss_pred HhHH
Confidence 8885
No 30
>TIGR00895 2A0115 benzoate transport.
Probab=100.00 E-value=1.5e-31 Score=250.84 Aligned_cols=368 Identities=19% Similarity=0.235 Sum_probs=252.3
Q ss_pred hhhHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHH
Q 013453 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (442)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~ 119 (442)
++.+....+..+...+......+..|.+.+++|.+..+ .+++.+.+.++..++.++.|+++||+|||+++..+.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~ 89 (398)
T TIGR00895 16 WRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQ------LGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSI 89 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHH------HHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHH
Confidence 33444555566677777777888899999999999988 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccc
Q 013453 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (442)
Q Consensus 120 ~~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 198 (442)
++..++.++..++++++.+++.|++.|++.+...+ ..+++.|++|+++|++++++.+.+..+|..++|.+++.+.+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~--- 166 (398)
T TIGR00895 90 LLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIP--- 166 (398)
T ss_pred HHHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhh---
Confidence 99999999999999999999999999999888877 59999999999999999999999999999999999999987
Q ss_pred cCCCcccccccccCCcChhHHHHHHHHHH-HHHHHHhhccccCCCCCCCCccc-hhhhhhhhhhhhhh-----hh--hhc
Q 013453 199 KYPNLFSSESLFGKFPYFLPCLCISLFAF-GVTIAAFWLPETLHRHNDDDDSC-DVSYDALESASAEV-----KE--EEG 269 (442)
Q Consensus 199 ~~~~~~gw~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~~~~~~~~~~~~-~~~~~~~~~~~~~~-----~~--~~~ 269 (442)
..||+..+ .+.++..+ ...+...++||+++...+++++. ++..++......++ ++ .++
T Consensus 167 ----~~g~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (398)
T TIGR00895 167 ----VFGWRSLF---------YVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQ 233 (398)
T ss_pred ----cccceeeh---------hhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhcccccccccccccccc
Confidence 45555544 55543333 33445566788765322221111 11101111000000 00 000
Q ss_pred ccccc-cccccccc---hhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHH
Q 013453 270 REATP-KKSLLKNW---PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYP 345 (442)
Q Consensus 270 ~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (442)
+..+. .+.+++++ ..+...+..++..........+.|.+. ++.|+++.+.+.......++.+++.+ +.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~ 306 (398)
T TIGR00895 234 GTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLM------VELGFSLSLAATGGALFNFGGVIGSI-IFG 306 (398)
T ss_pred chhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHcCCCHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 00111 11122222 222233333333333344444454322 33688899999999999999999988 667
Q ss_pred HHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHH
Q 013453 346 FLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAM 425 (442)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 425 (442)
++.||.+++...... ....+...++... .. ..+. .....++.+.......+....+..+.+|++.|+++.|+.+
T Consensus 307 ~l~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~--~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 380 (398)
T TIGR00895 307 WLADRLGPRVTALLL-LLGAVFAVLVGST--LF--SPTL-LLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAI 380 (398)
T ss_pred HHHhhcchHHHHHHH-HHHHHHHHHHHHH--hh--CHHH-HHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHH
Confidence 777888887443333 3333332222221 11 1111 2223333444555666778899999999999999999999
Q ss_pred HHHHHHHhhhcccCCCC
Q 013453 426 TGMSLFKAAGPAGGGAL 442 (442)
Q Consensus 426 ~~~~~g~~~gp~i~G~l 442 (442)
....+|.++||.+.|++
T Consensus 381 ~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 381 GIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHhHHhc
Confidence 99999999999999874
No 31
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=100.00 E-value=4.5e-31 Score=247.65 Aligned_cols=349 Identities=16% Similarity=0.113 Sum_probs=253.4
Q ss_pred HHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHH
Q 013453 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (442)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i 124 (442)
.+.+..++..++...+.|.+|.+.+++|.+..+ .++..+.+.+++.+++++.|+++||+|||++++.+..+..+
T Consensus 17 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~ 90 (406)
T PRK15402 17 CLVLFEFATYIANDMIQPGMLAVVEDFNAGAEW------VPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFIL 90 (406)
T ss_pred HHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 455566666778888889999999999999998 99999999999999999999999999999999999999999
Q ss_pred HHHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCc
Q 013453 125 FNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNL 203 (442)
Q Consensus 125 ~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~ 203 (442)
+.+++.++++++.+++.|+++|++.+...+ ..+++.|.+|+++|.+..++......+|..++|.+++.+.+ .
T Consensus 91 ~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~-------~ 163 (406)
T PRK15402 91 TCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIH-------V 163 (406)
T ss_pred HHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------c
Confidence 999999999999999999999999888777 58899999999999999999988888999999999999987 4
Q ss_pred ccccccccCCcChhHHHHHHHHHHHHHH-HHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhcccccccccccccc
Q 013453 204 FSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNW 282 (442)
Q Consensus 204 ~gw~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (442)
.||| ..+.+.++..++..+ ..+..||++++.+++.+ .+ +.....++++++|
T Consensus 164 ~~w~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------------------~~~~~~~~~~~~~ 215 (406)
T PRK15402 164 LPWR---------GMFVLFAALAALSFFGLWRAMPETAGRVGEKLS-LK------------------ELGRDYKLVLKNR 215 (406)
T ss_pred cCcc---------HHHHHHHHHHHHHHHHHHHhCCCCCcccccccc-HH------------------HHHHHHHHHHcCc
Confidence 4444 444666665555443 33456765432211100 00 0112345678889
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHH
Q 013453 283 PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGV 362 (442)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (442)
.++...+..++.......+....|.++. +.+|+++.+.+.......++.+++.+ ..+++.||.++++....+..
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~-----~~~g~~~~~~g~~~~~~~~~~~~g~~-~~g~l~~r~~~~~~~~~~~~ 289 (406)
T PRK15402 216 RFVAGALALGLVSLPLLAWIALSPVILI-----SGEQLSSYEYGLLQVPVFGALIAGNL-TLARLTSRRPLRSLIRMGLW 289 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHH-----HHhCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCHHHHHHHHHH
Confidence 8887766666555544455455565543 23688898989887777777888877 66667778888888888777
Q ss_pred HHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhcccCCCC
Q 013453 363 LTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGAL 442 (442)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i~G~l 442 (442)
...++..++...........+ .......+.+.......+........ .+++++|++.++.+..+.++..+|+.+.|.+
T Consensus 290 ~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~g~g~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l 367 (406)
T PRK15402 290 PMVAGLLLAALATVISSHAYL-WLTAGLSLYAFGIGLANAGLYRLTLF-SSDVSKGTVSAAMGMLSMLIFTVGIELSKHA 367 (406)
T ss_pred HHHHHHHHHHHHHHcccccHH-HHHHHHHHHHHHHHHHhhhHHHHHhh-hccccccHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 666666655543321111111 12222222222333333444443333 4458999999999999999999999887753
No 32
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=9.2e-32 Score=258.16 Aligned_cols=376 Identities=14% Similarity=0.038 Sum_probs=244.8
Q ss_pred hhHHHHHHHHHHhHhcchhhchhHHHHHHHh--------cccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCc
Q 013453 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDF--------QIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRK 112 (442)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr 112 (442)
+..+...+..+...++...+.+..|.+.+++ +.++.+ .+++.+++.++..++++++|+++||+|||
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~s~~~ig~~~~~~~~G~l~dr~Grr 85 (479)
T PRK10077 12 SITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSL------LGFCVASALIGCIIGGALGGYCSNRFGRR 85 (479)
T ss_pred HHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhH------HHHHHHHHHHHHHHHHHHHHHHHHHhccH
Confidence 3444566777888888899999999999888 666677 99999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHhcc------------chHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhh
Q 013453 113 PVIIMGTASVVIFNTLFGLS------------VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAW 179 (442)
Q Consensus 113 ~~~~~~~~~~~i~~~~~~~a------------~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~ 179 (442)
++++++.+++.++.++++++ +.++.+++.|+++|++.|...+ ..++++|++|+++|++++++.+.+.
T Consensus 86 ~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~ 165 (479)
T PRK10077 86 DSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAI 165 (479)
T ss_pred HHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHH
Confidence 99999999999998887763 2356788999999999998888 5999999999999999999999999
Q ss_pred hhHHHHHHHhhhhhccccccCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhccccCCCCCCCCccchh--hhhhh
Q 013453 180 GIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDV--SYDAL 257 (442)
Q Consensus 180 ~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~--~~~~~ 257 (442)
.+|.++++.+++.+...... ... ..++||.++++.++..++..+..+++||+|++...+++.++. ..++.
T Consensus 166 ~~G~~~~~~~~~~~~~~~~~-------~~~-~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~ 237 (479)
T PRK10077 166 IFGQLVVYFVNYFIARSGDA-------SWL-NTDGWRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRKI 237 (479)
T ss_pred HHHHHHHHHHHHHHhccCcc-------ccc-ccCChHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHHHH
Confidence 99999998887766531100 000 144677777877777776666677889987653222111111 00111
Q ss_pred hhhhh------hhhhhhcccccccccccccchhHHHHHHHHHHHHHHh----hHHHHHHHHhcCCcccCcccCChhHHHH
Q 013453 258 ESASA------EVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDM----AYSEIFSLWANSPKKLGGLNYSTQMVGE 327 (442)
Q Consensus 258 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (442)
....+ +..+..+++....+..+... ............+... ....+.|.+. ++.|++....+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~------~~~g~~~~~~~~ 310 (479)
T PRK10077 238 MGNTLATQALQEIKHSLDHGRKTGGKLLMFG-VGVIVIGVMLSVFQQFVGINVVLYYAPEIF------KTLGASTDIALL 310 (479)
T ss_pred cCChhHHHHHHHHHHHHHHhhhhhhhhcchh-HHHHHHHHHHHHHHHHhChhHHHHHHHHHH------HHcCCCCchHHH
Confidence 00000 00000000000001111100 0011111111111111 0111122222 335777666677
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhh
Q 013453 328 VLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFIL 407 (442)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (442)
.....++..+++.+ +..++.||++||+.+..+..+..++..++...........+ ......++.........+..+.+
T Consensus 311 ~~~~~~~~~~i~~~-~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 388 (479)
T PRK10077 311 QTIIVGVINLTFTV-LAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIV-ALLSMLFYVAAFAMSWGPVCWVL 388 (479)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHH-HHHHHHHHHHHHhccccchhHHH
Confidence 77777888888887 67778888899999988888877776665543221111111 11122222222222334667899
Q ss_pred hcccCChhhhhHHHHHHHHHHHHHHhhhcccC
Q 013453 408 QNRAVDQDQRGAANGIAMTGMSLFKAAGPAGG 439 (442)
Q Consensus 408 ~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i~ 439 (442)
++|.+|+++|+++.|+.+..++++.++++.+.
T Consensus 389 ~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~ 420 (479)
T PRK10077 389 LSEIFPNAIRGKALAIAVAAQWIANYFVSWTF 420 (479)
T ss_pred hHhhCChhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999998885443
No 33
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=4.5e-32 Score=260.74 Aligned_cols=366 Identities=17% Similarity=0.106 Sum_probs=245.2
Q ss_pred HHHHHHhHhcchhhchhHHHHHHHhccc--------ccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHH
Q 013453 47 WIIVLCTALPISSLFPFLYFMIKDFQIA--------KREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (442)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~ 118 (442)
.+..++..++...+.+..|.+.++++.+ ..+ .+++.+++.++..++++++|+++||+|||++++.+
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~ 107 (481)
T TIGR00879 34 AIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSL------WGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLII 107 (481)
T ss_pred HHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhH------HHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHH
Confidence 3344556667778888889888888887 556 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcc---chHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhh---h
Q 013453 119 TASVVIFNTLFGLS---VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG---G 191 (442)
Q Consensus 119 ~~~~~i~~~~~~~a---~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~---~ 191 (442)
.+++.++.+++.+. .+++.+++.|+++|++.+...+ ..+++.|++|+++|++++++.+.+..+|..+++.++ .
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~ 187 (481)
T TIGR00879 108 ALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKV 187 (481)
T ss_pred HHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999988553 4566899999999999888888 589999999999999999999999999999999998 4
Q ss_pred hhccccccCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhccccCCCCCCCCccch--hhhhhhhhhh--------
Q 013453 192 FLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCD--VSYDALESAS-------- 261 (442)
Q Consensus 192 ~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~--~~~~~~~~~~-------- 261 (442)
...+ ..+||..+.+.++..++..+..+++||+|+....+++.++ +..++.....
T Consensus 188 ~~~~----------------~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (481)
T TIGR00879 188 SLNN----------------TLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLD 251 (481)
T ss_pred cCCC----------------CccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHH
Confidence 4444 4456666677666666666667778887653211111111 0000000000
Q ss_pred ------hhhhhhhccccccccccccc------chhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHH
Q 013453 262 ------AEVKEEEGREATPKKSLLKN------WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVL 329 (442)
Q Consensus 262 ------~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (442)
...+.+.+.....+++.++. +.++...+..+...........+.+.+. ++.|++..+.+...
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~g~~~~~~~~~~ 325 (481)
T TIGR00879 252 ELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIF------ENAGVSTDHAFLVS 325 (481)
T ss_pred HHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHH------HHcCCCchHHHHHH
Confidence 00000000001112222221 1122122222211111112222333332 33588888888888
Q ss_pred HHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhhchh-----hHHHHHHHHHHHHHHHHHHHHhh
Q 013453 330 AITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFG-----LAFLLNCASVVKNLLSVSIITGL 404 (442)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 404 (442)
....++.+++.+ +..++.||.+||+....+..+..+++.++.......... .+.......++..+.+.+..+..
T Consensus 326 ~~~~~~~~~~~~-~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (481)
T TIGR00879 326 IIVGAVNFAFTF-VAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVP 404 (481)
T ss_pred HHHHHHHHHHHH-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCee
Confidence 888888899888 667788888999988888777666665554322111111 22223333333334444455666
Q ss_pred hhhhcccCChhhhhHHHHHHHHHHHHHHhhhcccCCC
Q 013453 405 FILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGA 441 (442)
Q Consensus 405 ~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i~G~ 441 (442)
..+..|.+|++.|+++.|+.++..++|++++|.+.|+
T Consensus 405 ~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~ 441 (481)
T TIGR00879 405 WVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPT 441 (481)
T ss_pred hhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777999999999999999999999999999988764
No 34
>PRK03633 putative MFS family transporter protein; Provisional
Probab=100.00 E-value=7.2e-31 Score=243.90 Aligned_cols=338 Identities=14% Similarity=0.137 Sum_probs=248.3
Q ss_pred hhhHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHH
Q 013453 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (442)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~ 119 (442)
.+.++.++...++..++.....+.+|.+.+++|.++.+ .|++.+.+.++..+++++.|+++||+|||+++..+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~------~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~ 78 (381)
T PRK03633 5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQ------VGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLAS 78 (381)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 35577788888899999999999999999999999998 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccc
Q 013453 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (442)
Q Consensus 120 ~~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 198 (442)
++.+++.+++++++|++.+++.|+++|++.+...| ..+.+.|..++++|+++++..+.+.++|..+||.+++.+.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~--- 155 (381)
T PRK03633 79 LIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVST--- 155 (381)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---
Confidence 99999999999999999999999999999888877 47788888999999999999999999999999999999876
Q ss_pred cCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhcccccccccc
Q 013453 199 KYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSL 278 (442)
Q Consensus 199 ~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (442)
...| ...|+. ........ ...+.+.+++..++ + +..+.++.
T Consensus 156 ----~~~~-----~~~~~~-----~~~~~~~~-~~~~~~~~~~~~~~-~-----------------------~~~~~~~~ 196 (381)
T PRK03633 156 ----ELMS-----VLPWVT-----GLVLAAIL-PLLFTRILNQQAEN-H-----------------------DSTSIWPM 196 (381)
T ss_pred ----cccc-----hHHHHH-----HHHHHHHH-HHHHhcccCCCCCC-C-----------------------CCCCHHHH
Confidence 1111 112221 11111111 11122221111100 0 01123446
Q ss_pred cccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHH
Q 013453 279 LKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVAR 358 (442)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (442)
+++|.++......+...........+.|.|... .|.++.+.+...+...++.++++. ..+++.||+++++.+.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~------~g~s~~~~g~~~~~~~~~~~~~~~-~~g~l~dr~~~~~~l~ 269 (381)
T PRK03633 197 LKLRQARLGVNGCIISGIVLGSLYGLMPLYLNH------QGMSDASIGFWMALLVSAGILGQW-PIGRLADRFGRLLVLR 269 (381)
T ss_pred HHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHHHHHHHHHHHHh-hhHHHHHHcCcHHHHH
Confidence 677776654443444333444455566766542 478888999988888899999998 5667778889988887
Q ss_pred HHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhccc
Q 013453 359 IAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAG 438 (442)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i 438 (442)
.+.....++..... . ..... ....+.+.......|.....+.|..|+++++...+..+...++|.++||.+
T Consensus 270 ~~~~~~~~~~~~~~--~---~~~~~----~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~ 340 (381)
T PRK03633 270 VQVFVVILGSIAML--S---QAAMA----PALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSF 340 (381)
T ss_pred HHHHHHHHHHHHHh--h---hHHHH----HHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77666665544332 1 11111 111222233445667788888888998888888999888899999999998
Q ss_pred CCC
Q 013453 439 GGA 441 (442)
Q Consensus 439 ~G~ 441 (442)
.|+
T Consensus 341 ~G~ 343 (381)
T PRK03633 341 TAM 343 (381)
T ss_pred HHH
Confidence 875
No 35
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=100.00 E-value=9.8e-31 Score=247.60 Aligned_cols=368 Identities=14% Similarity=0.063 Sum_probs=244.8
Q ss_pred ChhhHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHH
Q 013453 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (442)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~ 118 (442)
+|..+....+...........+...+|.+.+++|.+.++ .+++.+.+.++..++.++.|+++||+|||++++.+
T Consensus 17 ~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~------~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~ 90 (455)
T TIGR00892 17 GWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSE------TAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAG 90 (455)
T ss_pred chHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhH------HHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhh
Confidence 343343444444444444455677789999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccchHHHHHH-HHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccc
Q 013453 119 TASVVIFNTLFGLSVNFWMAVL-TRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (442)
Q Consensus 119 ~~~~~i~~~~~~~a~~~~~l~~-~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 196 (442)
.++..++.++++++++++.+++ .|+++|++.+...+ ..+++.++++ ++|+++.++.+.+..+|..++|.+++.+.+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~- 168 (455)
T TIGR00892 91 GLLASLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFE- 168 (455)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHH-
Confidence 9999999999999999998875 57999999887544 5788889886 789999999999999999999999999988
Q ss_pred cccCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhc-cccCCCCCCCCccchhhh-hhhhhhhhhhhhhhcccccc
Q 013453 197 AEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWL-PETLHRHNDDDDSCDVSY-DALESASAEVKEEEGREATP 274 (442)
Q Consensus 197 ~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~e~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 274 (442)
.+ +||..+.+.+++.++..+..+++ ++.+.++..+.++.+... +...+........++..+..
T Consensus 169 ------~~---------gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (455)
T TIGR00892 169 ------SF---------GWRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFL 233 (455)
T ss_pred ------Hh---------ChHHHHHHHHHHHHHHHHHHHHhCCCCcccccccccccccCCCCCccccccccchhhhhhhhc
Confidence 33 45555577766665554433333 322211100000000000 00000000000000001111
Q ss_pred cccccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHh--hc
Q 013453 275 KKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI--LG 352 (442)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 352 (442)
..+++++|+++......++..........+++.|... .|++..+++.+.++.+++.+++++ ...++.|| .+
T Consensus 234 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~------~g~s~~~~g~~~~~~~~~~~~~~~-~~g~l~d~~~~~ 306 (455)
T TIGR00892 234 DFSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKD------KGVDEYEAAFLLSIIGFVDIFARP-SCGLIAGLKWIR 306 (455)
T ss_pred chHHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHH------cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHhcccccC
Confidence 1257788988877777766666665555666666532 588999999999999999999888 44455543 33
Q ss_pred hhHHHHHHH--HHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHH
Q 013453 353 PIMVARIAG--VLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSL 430 (442)
Q Consensus 353 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~ 430 (442)
+++...+.. ....+..++.... . ..+. +.+..++.+.......+...+.+.+.+|+++++++.|+.++..++
T Consensus 307 ~~~~~~~~~~~~~~~l~~ll~~~~---~--~~~~-~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~l 380 (455)
T TIGR00892 307 PHVQYLFSFALLFNGLTHLLCALA---G--DYTG-LVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECC 380 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh---c--hHHH-HHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHH
Confidence 333332222 2222222222111 1 1222 222333334444455667778888889999999999999999999
Q ss_pred HHhhhcccCCCC
Q 013453 431 FKAAGPAGGGAL 442 (442)
Q Consensus 431 g~~~gp~i~G~l 442 (442)
|+++||.++|.+
T Consensus 381 g~~igp~i~G~l 392 (455)
T TIGR00892 381 AVLIGPPLAGRL 392 (455)
T ss_pred HHHccccceeee
Confidence 999999999864
No 36
>PRK15075 citrate-proton symporter; Provisional
Probab=100.00 E-value=5.4e-31 Score=248.68 Aligned_cols=359 Identities=16% Similarity=0.115 Sum_probs=230.7
Q ss_pred hhhHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHH-HH-----HHHHHHhhhhhhhhhhcccCCch
Q 013453 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVG-SS-----FMFGRALTSVFWGLVADRYGRKP 113 (442)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-s~-----~~~~~~~~~~~~G~l~dr~Grr~ 113 (442)
++.....+++.+++.++...+.+..|.+.+|++.++.+ .+.+. +. ..++..+++++.|+++||+|||+
T Consensus 14 ~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~ 87 (434)
T PRK15075 14 ARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNE------FASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRK 87 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCc------hHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHH
Confidence 44566788899999999999999999999999988877 44332 22 23334578999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhccchHH--------HHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHH
Q 013453 114 VIIMGTASVVIFNTLFGLSVNFW--------MAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLI 184 (442)
Q Consensus 114 ~~~~~~~~~~i~~~~~~~a~~~~--------~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ 184 (442)
+++.+.+++.++.++++++++++ .++++|+++|++.+...+ ...+++|++|+++|++++++.+.+.++|..
T Consensus 88 ~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~ 167 (434)
T PRK15075 88 GLIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVV 167 (434)
T ss_pred HHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHH
Confidence 99999999999999999999987 468999999999998877 589999999999999999999999999998
Q ss_pred HHHHhhhhhccccccCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhccccCCCCCCCCccchhhhhhhhhhhhhh
Q 013453 185 IGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEV 264 (442)
Q Consensus 185 ~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (442)
+++.+++.+.....+ ...- .++||.++.+..+...+........||+++..+++
T Consensus 168 ~g~~~g~~l~~~~~~-------~~~~-~~gWr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~------------------ 221 (434)
T PRK15075 168 FAALLGYLLNQWLSP-------AQMA-EWGWRIPFLIGCLIVPFIFLIRRSLEETEEFLARK------------------ 221 (434)
T ss_pred HHHHHHHHHHHhCCH-------HHHh-ccchHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhh------------------
Confidence 888888877531100 0000 34566655654333222222222222221100000
Q ss_pred hhhhcccccccccccccchhHHHH-HHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhH
Q 013453 265 KEEEGREATPKKSLLKNWPLMSSI-IVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSL 343 (442)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (442)
++.+.....++..++++.+... ...++..........+.|.|+.+. +|++..+.++...+..++.+++.+ +
T Consensus 222 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-----~g~~~~~~~~~~~~~~~~~~~~~~-~ 293 (434)
T PRK15075 222 --HRPSMREIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTV-----LHLSAADSLLVTLCVGVSNFIWLP-I 293 (434)
T ss_pred --hccccccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHH-H
Confidence 0000011122233444433322 222223333444555666665432 588888888888888888888888 6
Q ss_pred HHHHHHhhchhHHHHHHHHHHHHHHH-HHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHH
Q 013453 344 YPFLERILGPIMVARIAGVLTIPLLT-SYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANG 422 (442)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g 422 (442)
.+++.||++||+....+.....+... .+..... ...... ......+.+.......+....+..|.+|++.|+++.|
T Consensus 294 ~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g 370 (434)
T PRK15075 294 GGALSDRIGRRPVLIAFTVLAILTAYPALSWLVA--APSFAR-MLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFS 370 (434)
T ss_pred HHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHc--CCchHH-HHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchhee
Confidence 77788888998877665444332221 1111111 111111 1111111112222334445577889999999999999
Q ss_pred HHHHHHH-HHHhhhcccCCC
Q 013453 423 IAMTGMS-LFKAAGPAGGGA 441 (442)
Q Consensus 423 ~~~~~~~-~g~~~gp~i~G~ 441 (442)
+.+.... +++.++|.+.|+
T Consensus 371 ~~~~~~~~~~g~~~p~~~g~ 390 (434)
T PRK15075 371 LAYSLATAIFGGFTPAISTW 390 (434)
T ss_pred HHHHHHHHHHhhhHHHHHHH
Confidence 9765555 457788887764
No 37
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=100.00 E-value=1.1e-30 Score=244.66 Aligned_cols=339 Identities=19% Similarity=0.118 Sum_probs=235.6
Q ss_pred CChhhHHHHHHHHHHhHhcchhhchhHHH-HHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhH
Q 013453 38 LPITELFSIWIIVLCTALPISSLFPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII 116 (442)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~ 116 (442)
+.++++..+.+..++..++.++..+.+|. +.+++|.++.+ .|++.+++.+++.+++++.|+++||+||||+++
T Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~------~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~ 85 (399)
T PRK05122 12 RLTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFL------AGLVISLQYLATLLSRPHAGRYADTLGPKKAVV 85 (399)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHH------HHHHHHHHHHHHHHhchhhHhHHhccCCcchHH
Confidence 34567778888999999999999999997 56889999999 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcc--------chHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHH
Q 013453 117 MGTASVVIFNTLFGLS--------VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGP 187 (442)
Q Consensus 117 ~~~~~~~i~~~~~~~a--------~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 187 (442)
.+.++.+++.+.+.++ .+++.+++.|+++|++.+...+ ..+++.|++|+|+|++++++.+.+..+|.++||
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 165 (399)
T PRK05122 86 FGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGA 165 (399)
T ss_pred HHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHH
Confidence 9999888877665543 2577899999999999998888 488899999999999999999999999999999
Q ss_pred HhhhhhccccccCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhh
Q 013453 188 ALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEE 267 (442)
Q Consensus 188 ~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (442)
.+++.+.+ ..+|+..+.+..+..++..+.....|++++ ++++ ++
T Consensus 166 ~l~~~l~~----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~---------------- 209 (399)
T PRK05122 166 PLGVLLYH----------------WGGLAGLGLLIMLLALLGLLLARPRPAVPP---VKGE-RL---------------- 209 (399)
T ss_pred HHHHHHHH----------------cccHHHHHHHHHHHHHHHHHHHhcCCCCCC---CCcc-ch----------------
Confidence 99999987 344554445544444333332222222211 1000 00
Q ss_pred hcccccccccccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHH
Q 013453 268 EGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFL 347 (442)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (442)
+.++.++ +.+.......+..........+.+.|+.+ .++ .+.+.......++.+++.+ ..+++
T Consensus 210 ------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~--~~~~~~~~~~~~~~~~~~~-~~g~l 272 (399)
T PRK05122 210 ------PFRRVLG--RVWPYGMGLALASIGFGTIATFITLYYAA------RGW--DGAALALTLFGVAFVGARL-LFGNL 272 (399)
T ss_pred ------hHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH------ccc--ccchHHHHHHHHHHHHHHH-HHHHH
Confidence 0111111 11222222223333333444555655432 233 2345556667778888877 56667
Q ss_pred HHhhchhHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHH
Q 013453 348 ERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTG 427 (442)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 427 (442)
.||.++++....+..+..++..++.... ..+. ..+..++.+.+.....+.......+..|+++||++.|+.+..
T Consensus 273 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 346 (399)
T PRK05122 273 INRLGGLRVAIVSLLVEILGLLLLWLAP-----SPWM-ALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVF 346 (399)
T ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHhc-----cHHH-HHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 7777888888777766666655544422 1222 222233333334445556566667789999999999999999
Q ss_pred HHHHHhhhcccCCC
Q 013453 428 MSLFKAAGPAGGGA 441 (442)
Q Consensus 428 ~~~g~~~gp~i~G~ 441 (442)
.++|..++|.+.|+
T Consensus 347 ~~~g~~~~~~~~g~ 360 (399)
T PRK05122 347 LDLSLGITGPLAGL 360 (399)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999998887764
No 38
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=100.00 E-value=4.2e-31 Score=245.66 Aligned_cols=346 Identities=12% Similarity=0.051 Sum_probs=240.4
Q ss_pred hHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHH
Q 013453 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (442)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~ 121 (442)
++..+++..++..++........+.+.++++.+..+ .+++.+.+.+++.+.++++|+++||+|||++++++.++
T Consensus 4 ~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~ 77 (393)
T PRK11195 4 GFYAIMAAQFFSALADNALLFAAIALLKELHYPDWS------QPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGI 77 (393)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHH------HHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHH
Confidence 455677788888887766777777778999999888 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccchHHHHHHHHHHHHhhcchhhHH-HHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccC
Q 013453 122 VVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKY 200 (442)
Q Consensus 122 ~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~ 200 (442)
.+++.++++++.+. ++.|+++|++.+...|+ .+++.|++|+|+|++++++.+....+|.++||.++|++.+
T Consensus 78 ~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~----- 149 (393)
T PRK11195 78 KLLGCLLMLFGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALAD----- 149 (393)
T ss_pred HHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Confidence 99998888776664 78899999999999995 9999999999999999999999999999999999999987
Q ss_pred CCcccccccccCCcChhHHHHHHHHHHHHHHHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhcccccccccccc
Q 013453 201 PNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLK 280 (442)
Q Consensus 201 ~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (442)
. .|+.++.+.+...++..+..+.+||+++++++++++.....++. ....+.+++
T Consensus 150 -----------~-~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~l~~ 203 (393)
T PRK11195 150 -----------P-HAEAALAVCALIYLLAALFNLFIPRLGARRPGQSWNPIALLRDF--------------FHACRVLWR 203 (393)
T ss_pred -----------H-HHHHHHHHHHHHHHHHHHHHhcCCCCcccccccCCCHHHHHHHH--------------HHHHHHHHh
Confidence 1 14444444444444444555677876543222111110000000 011245677
Q ss_pred cchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHH
Q 013453 281 NWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIA 360 (442)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (442)
+|.++.......+...........++.|.+. .+|.++.+.|......+++.+++++ ...++.|+.++++....+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~lg~s~~~~G~~~~~~~~g~i~g~~-~~~~l~~~~~~~~~~~~g 277 (393)
T PRK11195 204 DKLGRFSLAGTTLFWGAGATLRFLVLAWAPV-----ALGITLNQPAYLQAVVAIGIAVGAG-AAARLVTLETVLRVLPAG 277 (393)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HcCCChhHHHHHHHHHHHHHHHHHH-HHHHHhcCCcccchHHHH
Confidence 7776655544444444444444455555543 2688999999999999999999998 555555565666666555
Q ss_pred HHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhh-hhHHHHHHHHHHHHHHhhhcccC
Q 013453 361 GVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQ-RGAANGIAMTGMSLFKAAGPAGG 439 (442)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~g~~~~~~~~g~~~gp~i~ 439 (442)
... .+....+... + ..+. .....++.+.......+...+...+..|++. +|++.++.+..++++..++..+.
T Consensus 278 ~~~-~~~~~~~~~~---~--~~~~-~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~ 350 (393)
T PRK11195 278 ILM-GLVVLLMALQ---H--SLLP-AYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLY 350 (393)
T ss_pred HHH-HHHHHHHHHH---h--HHHH-HHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHH
Confidence 432 2222222221 1 1222 2222222333333334555666667655554 79999999999999999888765
Q ss_pred C
Q 013453 440 G 440 (442)
Q Consensus 440 G 440 (442)
+
T Consensus 351 ~ 351 (393)
T PRK11195 351 S 351 (393)
T ss_pred H
Confidence 4
No 39
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=1.1e-31 Score=259.21 Aligned_cols=340 Identities=16% Similarity=0.191 Sum_probs=241.8
Q ss_pred hhHHHHHHHhccc---ccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhccchHHHH
Q 013453 62 PFLYFMIKDFQIA---KREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMA 138 (442)
Q Consensus 62 ~~~~~~~~~~~~~---~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a~~~~~l 138 (442)
+..|.+.+|++++ ..+ .+++.+++.++..+++++.|+++||+|||++++++.++..++.++.+++++++.+
T Consensus 110 ~~~~~i~~e~~l~c~~~~~------~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~ 183 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWK------VDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVF 183 (505)
T ss_pred cccccEEEEecceechHHH------HHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHH
Confidence 5668889999998 666 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCcccccccccCCcChh
Q 013453 139 VLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFL 217 (442)
Q Consensus 139 ~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~ 217 (442)
++.|++.|++.+...+ ..+++.|++|+++|+++.++...+..+|.+++|.+++.+.+ ||.
T Consensus 184 ~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~-------------------wr~ 244 (505)
T TIGR00898 184 LVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD-------------------WRW 244 (505)
T ss_pred HHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH-------------------HHH
Confidence 9999999999888777 59999999999999999999999999999999998866542 555
Q ss_pred HHHHHHHHHHHHHHHHhhccccCCCCCCCCccchhh--hhhhhhhh----------h--hhhhhhcccccccccccccch
Q 013453 218 PCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVS--YDALESAS----------A--EVKEEEGREATPKKSLLKNWP 283 (442)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~--~~~~~~~~----------~--~~~~~~~~~~~~~~~~~~~~~ 283 (442)
.+.+.+++.++..+..+++||+|++...+++.++.. .++..+.. . ++++++++.+...++++++|.
T Consensus 245 ~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 324 (505)
T TIGR00898 245 LQLAVSLPTFLFFLLSWFVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPN 324 (505)
T ss_pred HHHHHHHHHHHHHHHHHhcCCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChH
Confidence 557777777776666688999987643332221111 11111000 0 000011112245678888988
Q ss_pred hHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHHH
Q 013453 284 LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVL 363 (442)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (442)
++...+...+..+.........+.+ ...++.+.... ....++..+++.+ +..++.||+|||+.+..+.++
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~---~~~~~~~~i~~~~-~~~~l~dr~grr~~~~~~~~~ 394 (505)
T TIGR00898 325 LRKTTLCLMMLWFTTAFSYYGLVLD------LGNLGGNIYLD---LFISGLVELPAKL-ITLLLIDRLGRRYTMAASLLL 394 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc------ccccCCChHHH---HHHHHHHHHHHHH-HHHHHHHHhCCHHHHHHHHHH
Confidence 8776665544333322211111111 12234443322 2334566666666 666778888999999888887
Q ss_pred HHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhcccCC
Q 013453 364 TIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGG 440 (442)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i~G 440 (442)
.+++++++.+.... ..+. .....++..++.....+..+.+.+|.+|++.|+++.|+.++...+|++++|.+.+
T Consensus 395 ~~~~~l~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~ 467 (505)
T TIGR00898 395 AGVALLLLLFVPVD---LYFL-RTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY 467 (505)
T ss_pred HHHHHHHHHHcCCC---chHH-HHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH
Confidence 77776665554321 1122 2222223333444556777889999999999999999999999999999998765
No 40
>PRK03699 putative transporter; Provisional
Probab=100.00 E-value=1.5e-30 Score=242.84 Aligned_cols=345 Identities=12% Similarity=0.112 Sum_probs=250.9
Q ss_pred hhhHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHH
Q 013453 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (442)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~ 119 (442)
++..+..++..++.........+.+|.+.+++|.|+++ .+++.+.+.+++.+++++.|++.||+|||+++..+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~------~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~ 79 (394)
T PRK03699 6 IKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSS------MSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGF 79 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 34455666777777777888889999999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccc
Q 013453 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (442)
Q Consensus 120 ~~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 198 (442)
++..++.++++++++++.+++.|+++|++.+...+ ..+++.|++|+++|+++++..+....+|..++|.+.+.+...
T Consensus 80 ~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-- 157 (394)
T PRK03699 80 ALMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLAR-- 157 (394)
T ss_pred HHHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--
Confidence 99999999999999999999999999999888777 588999999999999999999999999999999998887641
Q ss_pred cCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhcccccccccc
Q 013453 199 KYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSL 278 (442)
Q Consensus 199 ~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (442)
..+||.++.+.+++.++..+..++ ++.|+.++++++ ++ ++ . .++
T Consensus 158 -------------~~gw~~~f~~~~~~~~~~~~~~~~-~~~p~~~~~~~~--~~---------------~~-~---~~~- 201 (394)
T PRK03699 158 -------------SIEWYWVYACIGLVYVAIFILTLF-SEFPALGKHAPK--AD---------------KP-V---AKE- 201 (394)
T ss_pred -------------cccHHHHHHHHHHHHHHHHHHHHh-cCCccccccCcc--cc---------------Cc-c---ccc-
Confidence 234555556666655554433332 222221111000 00 00 0 011
Q ss_pred cccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHH
Q 013453 279 LKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVAR 358 (442)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (442)
..++.++...+..++..........+.|.|+.+ .+|+++.+.+.+.+...++..++++ ..+++.||+++|+.+.
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~-----~~g~s~~~~~~~~~~~~~~~~ig~~-~~g~l~dr~~~~~~l~ 275 (394)
T PRK03699 202 KWGIGVLFLAIAALLYILAQLTFISWVPEYAQK-----KFGMSLEDAGNLVSNFWMAYMVGMW-IFSFIVRFFDLQRILT 275 (394)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HcCCChHHhhHHHHHHHHHHHHHHH-HHHHHHHHhchhhHHH
Confidence 123556666666666666666777788877743 3688999999999998999999988 6777788889988877
Q ss_pred HHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhccc
Q 013453 359 IAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAG 438 (442)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i 438 (442)
....+..+.+.++.... + ..+ .....+..++......+...+...+..| +.+++..|......++|..++|.+
T Consensus 276 ~~~~~~~~~~~~~~~~~---~-~~~--~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~ 348 (394)
T PRK03699 276 VLAGLALVLMYLFVNTD---D-PSH--LLYAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVV 348 (394)
T ss_pred HHHHHHHHHHHHHHHcC---C-chH--HHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHH
Confidence 76655555444333221 1 111 1222233333444455665666666555 456788899999999999999998
Q ss_pred CCC
Q 013453 439 GGA 441 (442)
Q Consensus 439 ~G~ 441 (442)
.|+
T Consensus 349 ~G~ 351 (394)
T PRK03699 349 TSP 351 (394)
T ss_pred HHH
Confidence 875
No 41
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=100.00 E-value=8.8e-31 Score=249.17 Aligned_cols=360 Identities=12% Similarity=0.078 Sum_probs=240.8
Q ss_pred hhhHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHH
Q 013453 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (442)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~ 119 (442)
++.+...+...++.........+..|.+.+++|.+..+ .+++.+.+.+++.+++++.|+++||+|||+++..+.
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~------~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~ 108 (476)
T PLN00028 35 MRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSD------IGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLL 108 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHH
Confidence 34455666677777777777888899999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccchHHHHHHHHHHHHhhcchhhHHHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhcccccc
Q 013453 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (442)
Q Consensus 120 ~~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 199 (442)
++++++.++++++++++.+++.|++.|++.+...+...+++|++|+++|++++++.+...++|..+++.+.+.+......
T Consensus 109 ~~~~~~~~~~~~~~s~~~l~~~r~l~G~~~~~~~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~ 188 (476)
T PLN00028 109 MLTAPAVFCMSLVSSATGFIAVRFFIGFSLATFVSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKD 188 (476)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhHHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999998776655677899999999999999999888888888777766555331100
Q ss_pred --CCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhccccccccc
Q 013453 200 --YPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKS 277 (442)
Q Consensus 200 --~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (442)
..+ ..+||..+.+.+++.++..+..++++++++..+.++ . ++.. +.++.+....+++
T Consensus 189 ~~~~~---------~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~~~~~-----~----~~~~---~~~~~~~~~~~~~ 247 (476)
T PLN00028 189 AGAPS---------FTAWRIAFFVPGLLHIIMGILVLTLGQDLPDGNYRE-----L----KKSG---TMPKDSFSKVLRY 247 (476)
T ss_pred cCCcc---------hhhhHHHHHHHHHHHHHHHHHHHHHcCcCCCCchhh-----H----HhcC---ccccccHHHHHHH
Confidence 001 124555557777777666554445544322111000 0 0000 0000001123455
Q ss_pred ccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchh---
Q 013453 278 LLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPI--- 354 (442)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 354 (442)
.++++++|...+.+++.......+.++.|.|+.. .+|++..+++.+.+..+++.+++++ +.+++.||++||
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~-----~~g~s~~~a~~~~~~~~~~~~ig~~-~~G~lsDr~~~r~~~ 321 (476)
T PLN00028 248 GVTNYRTWILALTYGYSFGVELTMDNIIAEYFYD-----RFGLSLETAGAIAASFGLMNLFARP-AGGYLSDVAARRFGM 321 (476)
T ss_pred HHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHhcCc
Confidence 6778888877766665555555566667766542 3689999999999999999999998 677777776654
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHH
Q 013453 355 ----MVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSL 430 (442)
Q Consensus 355 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~ 430 (442)
........+..+.+.++... . ..+.... ..++.+.......+..+.+..+. +++.+|++.|+.+..+++
T Consensus 322 ~~r~~~~~~~~~l~~i~~~~~~~~---~--~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~g~l 394 (476)
T PLN00028 322 RGRLWALWIVQTLGGVFCIWLGRA---N--SLGAAIV-VMILFSIFVQAACGATFGIVPFV-SRRSLGVISGLTGAGGNV 394 (476)
T ss_pred chhHHHHHHHHHHHHHHHHHhccc---c--hHHHHHH-HHHHHHHHHHHhhhhhcccCccc-ChhhchhhhhhhhccccH
Confidence 12222222222222222111 1 1111111 11111222222333455555664 557999999999998888
Q ss_pred HHhhhcccC
Q 013453 431 FKAAGPAGG 439 (442)
Q Consensus 431 g~~~gp~i~ 439 (442)
|+.++|.+.
T Consensus 395 g~~i~~~l~ 403 (476)
T PLN00028 395 GAVLTQLLF 403 (476)
T ss_pred HHHHHHHHH
Confidence 998888764
No 42
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=7.9e-31 Score=250.22 Aligned_cols=370 Identities=14% Similarity=0.120 Sum_probs=252.4
Q ss_pred ChhhHHHHHHHHHHhHhcchhhchhHHHHHH----------------------HhcccccchhhhhHHHHHHHHHHHHHH
Q 013453 39 PITELFSIWIIVLCTALPISSLFPFLYFMIK----------------------DFQIAKREEDIGSYAGYVGSSFMFGRA 96 (442)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~g~~~s~~~~~~~ 96 (442)
++.....+++...+.+.++.......+.+.+ |++.+..+ .|++.+.+.+++.
T Consensus 17 r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~g~~~s~~~~~~~ 90 (465)
T TIGR00894 17 RLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGAL------QGLILSSHFYGQI 90 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHH------hhHHHHHHHHHHH
Confidence 3444446666777778888777777766665 67888888 9999999999999
Q ss_pred hhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhcc--chHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhh
Q 013453 97 LTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS--VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLS 173 (442)
Q Consensus 97 ~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a--~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~ 173 (442)
+++++.|+++||+|||+++..+.++++++.+++.++ .+++.+++.|+++|++.+...| ...++.|++|+++|+++++
T Consensus 91 ~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 170 (465)
T TIGR00894 91 IIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLG 170 (465)
T ss_pred HHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHH
Confidence 999999999999999999999999999998887554 5688999999999999999888 5899999999999999999
Q ss_pred hhhHhhhhHHHHHHHhhhhhccccccCCCc-ccccccccCCcChhHHHHHHHHHHHHHHHHh-hccccCCCCCCCCccch
Q 013453 174 TVSTAWGIGLIIGPALGGFLAQPAEKYPNL-FSSESLFGKFPYFLPCLCISLFAFGVTIAAF-WLPETLHRHNDDDDSCD 251 (442)
Q Consensus 174 ~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~-~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~e~~~~~~~~~~~~~ 251 (442)
+...+..+|.+++|++++.+.+ . .|||..| .+.++..++..+.++ ..+|+|+.++..+++++
T Consensus 171 ~~~~~~~~g~~i~~~l~~~l~~-------~~~gw~~~f---------~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 234 (465)
T TIGR00894 171 MSTSGFQLGTFIFLPISGWLCE-------SWGGWPMIF---------YVFGIVGCAWSLLWFVFPADDPSIHPCISKFEK 234 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-------ccCCCCeeh---------hhhhHHHHHHHHHHHHHhcCCcccCCCCCHHHH
Confidence 9999999999999999999987 3 2555444 777776666655444 45555543222111111
Q ss_pred hhhhhhhhhhhhhhhhhcccccccccccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHH
Q 013453 252 VSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAI 331 (442)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (442)
+.+++..+ +++++.+.+..++++++++.+|...+..++.......+..++|.|+.+ .+|++..+.++....
T Consensus 235 ---~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~-----~~g~s~~~~g~~~~~ 305 (465)
T TIGR00894 235 ---KYINSSLQ-GQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISW-----VLRVSGKENGLLSSL 305 (465)
T ss_pred ---HHHHhhcc-cccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HhCcChHHhHHHHHH
Confidence 11111111 111111223457788999999999888888888888888888888753 368899999999998
Q ss_pred HHHHHHHHHhhHHHHHHHhhchhH-----HH-HHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhh
Q 013453 332 TGFSLLVFQLSLYPFLERILGPIM-----VA-RIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLF 405 (442)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (442)
..++..++.+ +.+++.||.++++ .. .....+.........+.........+..... ..+.++......+...
T Consensus 306 ~~~~~~i~~~-~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~ 383 (465)
T TIGR00894 306 PYLFAWLCSI-FAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIII-LTLANAVSSGPLAGVL 383 (465)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHH-HHHHHHHhhhhhhhhh
Confidence 8999999888 5555666543221 11 1111111111111111111101111221211 2222222222233344
Q ss_pred hhhcccCChhhhhHHHHHHHHHHHHHHhhhcccCCCC
Q 013453 406 ILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGAL 442 (442)
Q Consensus 406 ~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i~G~l 442 (442)
....+..| +.+|.+.|+.++.+.+++.++|.+.|++
T Consensus 384 ~~~~~~~~-~~~g~~~g~~~~~~~l~~~i~p~l~g~~ 419 (465)
T TIGR00894 384 INSLDLAP-RFLGFIKGITGLPGFIGGLIASTLAGNI 419 (465)
T ss_pred hchhhcCh-hHHHHHHHHHHHHHHHHHHHHHHhhhee
Confidence 44455555 5899999999999999999999998863
No 43
>PRK10489 enterobactin exporter EntS; Provisional
Probab=100.00 E-value=4.4e-31 Score=248.48 Aligned_cols=347 Identities=14% Similarity=0.081 Sum_probs=249.9
Q ss_pred HHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHH
Q 013453 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (442)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~ 122 (442)
+..+....++..++.....+.+|.+.++++.+..+ .|++.+.+.++..+++++.|+++||+|||+++..+.++.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~ 92 (417)
T PRK10489 19 FRAVFIARFISIFGLGLLGVAVPVQIQMMTGSTLQ------VGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTC 92 (417)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH------HHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHH
Confidence 33455556677777788888999999999998888 999999999999999999999999999999999988877
Q ss_pred HHHHHHHhc-----cchHHHHHHHHHHHHhhcchhhHH-HHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccc
Q 013453 123 VIFNTLFGL-----SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (442)
Q Consensus 123 ~i~~~~~~~-----a~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 196 (442)
+++.+..+. .++++.+++.|++.|++.+...++ .+++.|++|+++|+++.++.+...++|..+||.+++.+.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~- 171 (417)
T PRK10489 93 GLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIA- 171 (417)
T ss_pred HHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHH-
Confidence 776655432 568899999999999998887774 8899999999999999999999999999999999999987
Q ss_pred cccCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhcccccccc
Q 013453 197 AEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKK 276 (442)
Q Consensus 197 ~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (442)
..| |+..+.+.++..++..+..+.+||++++++++++..++ .....+
T Consensus 172 ------~~~---------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~------------------~~~~~~ 218 (417)
T PRK10489 172 ------AGG---------VAWNYGLAAAGTFITLLPLLRLPALPPPPQPREHPLRS------------------LLAGFR 218 (417)
T ss_pred ------HHh---------hHHHHHHHHHHHHHHHHHHHhCCCCCCCCcccccchHH------------------HHHHHH
Confidence 334 44444666666555555566777754332111100000 011234
Q ss_pred cccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHH
Q 013453 277 SLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMV 356 (442)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (442)
.++++|.++...+..++... ......++|.|.... +|.++.+.+.+.+..+++.+++.+ +.+++.||.++++.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~-----~g~~~~~~g~~~~~~~~g~~ig~~-~~~~l~~~~~~~~~ 291 (417)
T PRK10489 219 FLLASPVVGGIALLGGLLTM-ASAVRVLYPALADEV-----WQMGAAQIGLLYAAVPLGAALGAL-TSGWLAHSARPGLL 291 (417)
T ss_pred HHHcChHHHHHHHHHHHHHH-HHhHHHhhHHHHHhc-----cCCChhHhHHHHHHHHHHHHHHHH-HHHHhhhccCcchH
Confidence 46677776655544443322 234455666665432 688889999999999999999988 66677777666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhc
Q 013453 357 ARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGP 436 (442)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp 436 (442)
+..+.....+....+...+ ..+. .....++.+.+.....+...++..+..|++.||+++|+.+...++|..+||
T Consensus 292 l~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~ 365 (417)
T PRK10489 292 MLLSTLGSFLAVGLFGLMP-----MWIL-AVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGA 365 (417)
T ss_pred HHHHHHHHHHHHHHHHccc-----hHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHH
Confidence 6666655555554443321 1222 222223333333334455667888889999999999999999999999999
Q ss_pred ccCCCC
Q 013453 437 AGGGAL 442 (442)
Q Consensus 437 ~i~G~l 442 (442)
.+.|++
T Consensus 366 ~l~G~l 371 (417)
T PRK10489 366 ALLGGL 371 (417)
T ss_pred HHHHHH
Confidence 988753
No 44
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=100.00 E-value=2.7e-30 Score=241.67 Aligned_cols=347 Identities=14% Similarity=0.112 Sum_probs=241.5
Q ss_pred HHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHH
Q 013453 46 IWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIF 125 (442)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~ 125 (442)
+.+..+...+......|.+|.+.++++.+..+ .++..+++.+++.++++++|+++||+|||++++.+.++++++
T Consensus 21 ~~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~------~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~ 94 (413)
T PRK15403 21 LILYDFAAYLTTDLIQPGIINVVRDFNADVSL------APASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLA 94 (413)
T ss_pred HHHHHHHHHHHHHhhccCHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHH
Confidence 34455566678889999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCcc
Q 013453 126 NTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLF 204 (442)
Q Consensus 126 ~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~ 204 (442)
.+++++++|++.++++|+++|++.+...+ ..+++.|++|+++|++++++......+|..+||.+++.+.+
T Consensus 95 ~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~--------- 165 (413)
T PRK15403 95 CAATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMH--------- 165 (413)
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------
Confidence 99999999999999999999999876656 47889999999999999999999999999999999999987
Q ss_pred cccccccCCcChhHHHHHHHHHHHHHHH-HhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhcccccccccccccch
Q 013453 205 SSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWP 283 (442)
Q Consensus 205 gw~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (442)
.++||..+.+.++..++..+. .+.+||+++.++++. ..+ +..+.+++++|||.
T Consensus 166 -------~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~~~~~~~-~~~------------------~~~~~~~~ll~~~~ 219 (413)
T PRK15403 166 -------FVHWKVLFAIIAVMGLIAFVGLLLAMPETVKRGAVPF-SAK------------------SVLRDFRNVFRNRL 219 (413)
T ss_pred -------hcCHHHHHHHHHHHHHHHHHHHHHhCCCCccccCCCC-ChH------------------HHHHHHHHHHcCHH
Confidence 344555557777766665543 456788654211110 000 01123567889999
Q ss_pred hHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHHH
Q 013453 284 LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVL 363 (442)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (442)
++...+...+.......+....|.++.+ .+|+++.+.++.......+.+++..+..++..|+.++|.. .....+
T Consensus 220 ~~~~~l~~~~~~~~~~~~~~~~P~~l~~-----~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~-~~~~~~ 293 (413)
T PRK15403 220 FLTGAATLSLSYIPMMSWVAVSPVILID-----AGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFI-WRAVPI 293 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHhChHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHH-HHHHHH
Confidence 9988777777666666666666666543 3688999999998877888888777566666665444432 222222
Q ss_pred HHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhcccCCC
Q 013453 364 TIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGA 441 (442)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i~G~ 441 (442)
..++..++........ ..+........+.+.+.....+......-. -....+|++.++.+.....+..+++...|+
T Consensus 294 ~~ig~~l~~~~~~~~~-~~~~~~~~~~~l~~~G~~~~~p~~~~~al~-~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~ 369 (413)
T PRK15403 294 QLVGLALLIVGNLLWP-HVWLWSVLGTSLYAFGIGLIFPTLFRFTLF-SNNLPKGTVSASLNMVILMVMAVSVEIGRW 369 (413)
T ss_pred HHHHHHHHHHHHHHcc-ccHHHHHHHHHHHHHHHHHHhHHHHHHHhc-cCCCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222222211110011 112112222222222333344444422211 122347899999888888877777766553
No 45
>PRK12382 putative transporter; Provisional
Probab=100.00 E-value=1.9e-30 Score=242.27 Aligned_cols=337 Identities=16% Similarity=0.147 Sum_probs=228.8
Q ss_pred hhhHHHHHHHHHHhHhcchhhchhHHHH-HHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHH
Q 013453 40 ITELFSIWIIVLCTALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (442)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~ 118 (442)
.+.++.+.+..++..+..+...|.+|.+ .+++|.|..+ .|++.+++.+++.++++++|+++||+||||+++.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~------~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~ 87 (392)
T PRK12382 14 NFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTM------VGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQG 87 (392)
T ss_pred cccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHH------HHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHH
Confidence 3456667777788888888888999864 6899999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH---hc-----cchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHh
Q 013453 119 TASVVIFNTLF---GL-----SVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPAL 189 (442)
Q Consensus 119 ~~~~~i~~~~~---~~-----a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 189 (442)
.+...++.+.+ +. .++++.+++.|+++|++.+...+ ..+++.|++|+|+|++++++.+.+...|..++|++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~ 167 (392)
T PRK12382 88 MLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPL 167 (392)
T ss_pred HHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHH
Confidence 88777665432 22 35889999999999999888877 48899999999999999999999999999999999
Q ss_pred hhhhccccccCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhc
Q 013453 190 GGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEG 269 (442)
Q Consensus 190 ~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (442)
++.+.+ .++|+..+.+..+..++........||.++++ ++ ++
T Consensus 168 ~~~l~~----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~------------------ 209 (392)
T PRK12382 168 GLLLHS----------------HFGFAALALTTMVLPLLAWAFNGTVRKVPAHA---GE-RP------------------ 209 (392)
T ss_pred HHHHHh----------------ccChHHHHHHHHHHHHHHHHHHHhccCCCCCc---cc-Cc------------------
Confidence 999987 44455444444333332222222233321110 00 00
Q ss_pred ccccccccccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHH
Q 013453 270 REATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLER 349 (442)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (442)
+.++.++ .++...+..++..........+.+.|+.+ .+++ +.+......+++.+++++ ..+++.|
T Consensus 210 ----~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~------~~~~--~~~~~~~~~~~~~~~~~~-~~g~l~~ 274 (392)
T PRK12382 210 ----SLWSVVG--LIWKPGLGLALQGVGFAVIGTFVSLYFAS------KGWA--MAGFTLTAFGGAFVLMRV-LFGWMPD 274 (392)
T ss_pred ----hHHHHHH--HHHHhHHHHHHHHHHHhHHHHHHHHHHHh------cCCc--hhHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 0011111 11111112222222333344455555432 2443 345555666777777777 5566777
Q ss_pred hhchhHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHH
Q 013453 350 ILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMS 429 (442)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 429 (442)
|.++++.+..+..+..+...++.... ..+. ......+.+.......+.......+..|+++||++.|+.++..+
T Consensus 275 r~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 348 (392)
T PRK12382 275 RFGGVKVAIVSLLVETVGLLLLWLAP-----TAWV-ALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQD 348 (392)
T ss_pred hcCCCeehHHHHHHHHHHHHHHHHcc-----cHHH-HHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 77888888777776666655544321 1222 22222333333334456666777788999999999999999999
Q ss_pred HHHhhhcccCCC
Q 013453 430 LFKAAGPAGGGA 441 (442)
Q Consensus 430 ~g~~~gp~i~G~ 441 (442)
+|..++|.+.|+
T Consensus 349 ~g~~ig~~~~g~ 360 (392)
T PRK12382 349 IAYGVSGPLAGM 360 (392)
T ss_pred HHHHHHHHHHHH
Confidence 999999988775
No 46
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=100.00 E-value=1.3e-30 Score=239.90 Aligned_cols=362 Identities=11% Similarity=0.031 Sum_probs=247.6
Q ss_pred CCChhhHHHHHHHHHHhHhcchhhchhHHHHHH-HhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhh
Q 013453 37 GLPITELFSIWIIVLCTALPISSLFPFLYFMIK-DFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVI 115 (442)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~ 115 (442)
+..+|.++..++..++......+..+..+.+.+ ++|+|.+| .+++.+++.+++.++.++.|++.||+|.|+++
T Consensus 30 ~~a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q------~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~ 103 (462)
T PRK15034 30 HIARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQ------LFLLTALPSVSGALLRVPYSFMVPIFGGRRWT 103 (462)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH
Confidence 334567777777777888888888898888876 89999999 99999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcc-----chHHHHHHHHHHHHhhcchhhHHHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhh
Q 013453 116 IMGTASVVIFNTLFGLS-----VNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG 190 (442)
Q Consensus 116 ~~~~~~~~i~~~~~~~a-----~~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 190 (442)
.++.++..+.+++.+++ ++++.+++.|++.|++.+.+.+....+++++|+++||+++|+.....++|..+++++.
T Consensus 104 ~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gigg~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~ 183 (462)
T PRK15034 104 VFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFAGANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVA 183 (462)
T ss_pred HHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHH
Confidence 99999999999999987 8999999999999998554444699999999999999999999777777777666655
Q ss_pred hhhccccccCCCccccccccc----CCcChhHHHHHHHHHHHHHHHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhh
Q 013453 191 GFLAQPAEKYPNLFSSESLFG----KFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKE 266 (442)
Q Consensus 191 ~~l~~~~~~~~~~~gw~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (442)
..+.... .-..+||+.... ..+|+....+..++.++..+..++..++++..+.
T Consensus 184 p~~i~~~--l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~~~~--------------------- 240 (462)
T PRK15034 184 PLVIFVP--VFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIASSRA--------------------- 240 (462)
T ss_pred HHHHHHH--HHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccc---------------------
Confidence 5433100 000345544331 2336666666666665554444433332221100
Q ss_pred hhcccccccccccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHH
Q 013453 267 EEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPF 346 (442)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (442)
..+..++.+|+|+.|...+.+++.+..+.++..++|.|.... ++............+...+.++ ++++
T Consensus 241 ----~~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~-------~~~~~~l~~~~l~~l~~~l~rp-lgG~ 308 (462)
T PRK15034 241 ----SIADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQ-------FPDVNILRLAFFGPFIGAIARS-VGGA 308 (462)
T ss_pred ----CHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH-------cChHHHHHHHHHHHHHHHHHHH-hhHH
Confidence 012245688999999999999998888888888888886542 2222222223334566777777 7888
Q ss_pred HHHhhchhHHHHHHHHHHHHHHHHHHH-HHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCCh-----------
Q 013453 347 LERILGPIMVARIAGVLTIPLLTSYPY-IAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQ----------- 414 (442)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 414 (442)
+.||+|+++++.++.+...++...... .+.......+. .....+.........+...+-++.+.+|+
T Consensus 309 LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~-~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~ 387 (462)
T PRK15034 309 ISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIA-FYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGG 387 (462)
T ss_pred HHHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHH-HHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhccccccc
Confidence 999999999988888766666533222 21111111221 11111111111112223344455555553
Q ss_pred ----------hhhhHHHHHHHHHHHHHHhhhcccCC
Q 013453 415 ----------DQRGAANGIAMTGMSLFKAAGPAGGG 440 (442)
Q Consensus 415 ----------~~~g~~~g~~~~~~~~g~~~gp~i~G 440 (442)
++.|.+.|+....+.+|+++-|.+.|
T Consensus 388 ~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g 423 (462)
T PRK15034 388 SDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFG 423 (462)
T ss_pred chhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHH
Confidence 26789999999999999999887655
No 47
>PRK11043 putative transporter; Provisional
Probab=100.00 E-value=4.3e-30 Score=240.71 Aligned_cols=345 Identities=17% Similarity=0.132 Sum_probs=248.4
Q ss_pred HHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHH
Q 013453 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (442)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~ 122 (442)
+.......++..+..+.+.|.+|.+.+++|.++++ .+++.+++.++..++++++|+++||+|||+++..+.++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~------~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 81 (401)
T PRK11043 8 LVYLAGLSMLGFLATDMYLPAFKAIQADLQTSASA------VSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLF 81 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHH------HHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHH
Confidence 33444456666677788889999999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCC
Q 013453 123 VIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYP 201 (442)
Q Consensus 123 ~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~ 201 (442)
.++.++++++++++.+++.|+++|++.+...+ ..+++.|++|++++++..+.......+|..++|.+++++.+
T Consensus 82 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~------ 155 (401)
T PRK11043 82 ALGSLGMLWVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLN------ 155 (401)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------
Confidence 99999999999999999999999999877777 48899999999999999999998999999999999999987
Q ss_pred CcccccccccCCcChhHHHHHHHHHHHHHHHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhccccccccccccc
Q 013453 202 NLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKN 281 (442)
Q Consensus 202 ~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (442)
..+|+..+.+.++..++..+..++++|++++.+++ + .+.++++++|+
T Consensus 156 ----------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-------------------~~~~~~~~~~~ 202 (401)
T PRK11043 156 ----------HFGWQAIFATLFAITLLLILPTLRLKPSKKARKQS----Q-------------------DALTFKQLLKS 202 (401)
T ss_pred ----------cCChHHHHHHHHHHHHHHHHHHHHcCCCCCccccc----h-------------------HHHHHHHHHcC
Confidence 44455555666666666555555555543221100 0 01234567778
Q ss_pred chhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHH
Q 013453 282 WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAG 361 (442)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (442)
|+++...+...+.......+..+.|.+.. ++|+++.+.++......++.+++++ ...++.||+++++......
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~------~~g~s~~~~g~~~~~~~~~~~~g~~-~~~~l~~r~~~~~~~~~~~ 275 (401)
T PRK11043 203 KTYLGNVLIFAACSAAFFAWLTGSPFILE------QMGYSPADIGLSYVPQTIAFLVGGY-GCRAALQKWGGEQLLPWLL 275 (401)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhHHHHH------HcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHcCHHHHHHHHH
Confidence 87776555555444444455555555543 2588999999888777788888877 5666777778877665555
Q ss_pred HHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhcccCCC
Q 013453 362 VLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGA 441 (442)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i~G~ 441 (442)
....++...+...........+. ........+.......+.......+..| +++|++.|+.++.+..++..++.+.|.
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~ 353 (401)
T PRK11043 276 VLFAVSVIAIWLASLLSHPSLVP-LLIPFCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSA 353 (401)
T ss_pred HHHHHHHHHHHHHHHhccCcHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444433322222111112222 2222223333444555666666556565 679999999999988888888877764
No 48
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.1e-32 Score=241.45 Aligned_cols=372 Identities=17% Similarity=0.122 Sum_probs=246.7
Q ss_pred CCCCCChhhHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCch
Q 013453 34 TKSGLPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKP 113 (442)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~ 113 (442)
...+.+.+.+..++++.+++..+.+.+....+.+.+.+|++++. .|++.+.+.+.+.+++|+.|+++||++||+
T Consensus 26 ~~~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~------~Gll~~vf~v~~~i~sPl~gyLadryNR~~ 99 (493)
T KOG1330|consen 26 LSMKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSE------LGLLQTVFIVVFMIASPLFGYLADRYNRKR 99 (493)
T ss_pred cccccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchh------ccchhHHHHHHHHHHHHHHHHHHhhcCcce
Confidence 34455667778899999999999999999999999999999999 999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhh
Q 013453 114 VIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGF 192 (442)
Q Consensus 114 ~~~~~~~~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 192 (442)
++.+|..+|.++.+++++++.||++.++|.+.|+|.+.+.| ++++++|.+|.++|++++++++.+..+|..+|.+++..
T Consensus 100 v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~ 179 (493)
T KOG1330|consen 100 VIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSV 179 (493)
T ss_pred EEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeee
Confidence 99999999999999999999999999999999999999999 59999999999999999999999999999999999999
Q ss_pred hccccccCCCccc-ccccccCCcChhHHHHHHHHHHHHH-HHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhcc
Q 013453 193 LAQPAEKYPNLFS-SESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGR 270 (442)
Q Consensus 193 l~~~~~~~~~~~g-w~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (442)
+.+ +.+ ||+.+ ...+++.++.. +..++++|+++..+++.+...+. .+....
T Consensus 180 va~-------~~~~Wr~af---------~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~~-----------~~~~ts 232 (493)
T KOG1330|consen 180 VAS-------LTFWWRWAF---------RGSAVLGVIVGLLVFLFVREPERGARDEVDGENKM-----------VKPFTS 232 (493)
T ss_pred ecc-------CccceEEEE---------EeehHHHHHHHHHHHhhccCcccccccccccCCcC-----------CCCccc
Confidence 987 444 44333 45555665554 44566677665332222111100 000111
Q ss_pred cccccccccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHh
Q 013453 271 EATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI 350 (442)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (442)
..++.+.+.|++.+....+.+....+...++.-+.|.+.+..... .|++..+..++..+...++.+|.+ .++.+.|+
T Consensus 233 ~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~--~~~~~~~~~ifg~vt~~~G~lGvl-~Ggiisd~ 309 (493)
T KOG1330|consen 233 VWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYEL--IGFDHNATLIFGGVTCAGGSLGVL-FGGIISDK 309 (493)
T ss_pred hHHHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHH--hCCccccchhhhhHHHhhchhhhe-ehHHHHHH
Confidence 123344555666666556666666655555555555554433222 233444444444444445555544 44445444
Q ss_pred ----hch---hHHHHHHHHHHHHHHHHH-HHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHH
Q 013453 351 ----LGP---IMVARIAGVLTIPLLTSY-PYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANG 422 (442)
Q Consensus 351 ----~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g 422 (442)
+.+ .+.--....+.+...+.+ ........ ......+++.++.-...........-+..+.+|+++|.++.+
T Consensus 310 ~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~-~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a 388 (493)
T KOG1330|consen 310 LSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTS-SSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYA 388 (493)
T ss_pred HHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHH
Confidence 322 121111111111111111 11111111 111112222222222222333444566778889999999999
Q ss_pred HHHHHHHH-HHhhhcccCCCC
Q 013453 423 IAMTGMSL-FKAAGPAGGGAL 442 (442)
Q Consensus 423 ~~~~~~~~-g~~~gp~i~G~l 442 (442)
+...+..+ |.+-+|.+.|.+
T Consensus 389 ~~~~~~h~fgd~~~p~ivGil 409 (493)
T KOG1330|consen 389 LDTVFEHIFGDAASPYIVGIL 409 (493)
T ss_pred HHHHHHHHhccCCCcceehhH
Confidence 99887765 555556587754
No 49
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=9e-31 Score=248.36 Aligned_cols=359 Identities=12% Similarity=0.027 Sum_probs=233.3
Q ss_pred HHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHH
Q 013453 48 IIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNT 127 (442)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~ 127 (442)
+......+.........|.+.++ |.+..+ .+++.+.+.+++.+++++.|+++||+|||++++++.++.+++.+
T Consensus 36 ~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~------~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~ 108 (452)
T PRK11273 36 FGYAAYYLVRKNFALAMPYLVEQ-GFSRGD------LGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVML 108 (452)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHc-CCCHHH------HHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHH
Confidence 33334444444456677888888 999999 99999999999999999999999999999999999999999999
Q ss_pred HHhccc----hHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHH-HHHHhhhhhccccccCC
Q 013453 128 LFGLSV----NFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLI-IGPALGGFLAQPAEKYP 201 (442)
Q Consensus 128 ~~~~a~----~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~-~g~~~~~~l~~~~~~~~ 201 (442)
++++++ +++.+++.|++.|++.+...+ ....+.|++|+++|++++++++.+.++|.. .+|+++..+..
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~------ 182 (452)
T PRK11273 109 FMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAW------ 182 (452)
T ss_pred HHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH------
Confidence 888753 788899999999999888777 578889999999999999999999999864 45554433332
Q ss_pred CcccccccccCCcChhHHHHHHHHHHHH-HHHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhcccccc-ccccc
Q 013453 202 NLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATP-KKSLL 279 (442)
Q Consensus 202 ~~~gw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 279 (442)
..+||..+++.+++.++. ++..+++||+|+....+++++.+ ++..+..+++++++.+.... .+.++
T Consensus 183 ----------~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (452)
T PRK11273 183 ----------FNDWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEYK--NDYPDDYNEKHEQELTAKQIFMQYVL 250 (452)
T ss_pred ----------hccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCChhhhh--hccccccccccCCCccHHHHHHHHHH
Confidence 123555556666555554 45566778876542211111000 00000000000000000000 12367
Q ss_pred ccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhh--chhHHH
Q 013453 280 KNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL--GPIMVA 357 (442)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 357 (442)
|++.+|...+..++..........++|.|+.+. .|++..+.+.......++.+++.+ +.+++.||. +|+...
T Consensus 251 ~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~-----~g~s~~~~~~~~~~~~~~~~~g~~-~~G~l~dr~~~~r~~~~ 324 (452)
T PRK11273 251 PNKLLWYIAIANVFVYLLRYGILDWSPTYLKEV-----KHFALDKSSWAYFLYEYAGIPGTL-LCGWMSDKVFRGNRGAT 324 (452)
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHccCCcchH
Confidence 888898888887777777777778888887643 578888888888888888888888 666777766 444332
Q ss_pred H-HHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhh-h
Q 013453 358 R-IAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAA-G 435 (442)
Q Consensus 358 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~-g 435 (442)
. ....+..+....+.. .. .. ..+.... .....+...............|.+|++.||++.|+.+...++|+.+ +
T Consensus 325 ~~~~~~l~~~~~~~~~~-~~-~~-~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g 400 (452)
T PRK11273 325 GVFFMTLVTIATIVYWL-NP-AG-NPTVDMA-CMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAA 400 (452)
T ss_pred HHHHHHHHHHHHHHHHH-hc-cc-ChHHHHH-HHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhh
Confidence 2 222222222222211 11 11 1111111 1111122212222233445668899999999999999999988765 7
Q ss_pred cccCCC
Q 013453 436 PAGGGA 441 (442)
Q Consensus 436 p~i~G~ 441 (442)
|.+.|+
T Consensus 401 ~~v~g~ 406 (452)
T PRK11273 401 SAIVGY 406 (452)
T ss_pred hhhHHH
Confidence 887764
No 50
>PRK03893 putative sialic acid transporter; Provisional
Probab=100.00 E-value=8.2e-31 Score=252.63 Aligned_cols=372 Identities=16% Similarity=0.161 Sum_probs=249.7
Q ss_pred CChhhHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHH
Q 013453 38 LPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (442)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~ 117 (442)
.+++.+..+++..+++.++.....+.+|.+.+++|.+..+ .+++.+.+.+++.+++++.|+++||+|||++++.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 90 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQ------AASLISAAFISRWFGGLLLGAMGDRYGRRLAMVI 90 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHH
Confidence 3455666888888999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccc
Q 013453 118 GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (442)
Q Consensus 118 ~~~~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 196 (442)
+.++.+++.++++++++++.+++.|++.|++.+...+ ..+++.|.+|+++|++++++...+..+|..++|.+++.+.+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~- 169 (496)
T PRK03893 91 SIVLFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVP- 169 (496)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 9999999999999999999999999999999887777 58999999999999999999999999999999999999987
Q ss_pred cccCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhccccCCCCCCCCccc--hhhhhhhhhhhhhhhhh-------
Q 013453 197 AEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSC--DVSYDALESASAEVKEE------- 267 (442)
Q Consensus 197 ~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~------- 267 (442)
..|| |..+.+..+..++.++....+||++++.++++++. ++..+.......+....
T Consensus 170 ------~~~w---------~~~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (496)
T PRK03893 170 ------VWGW---------RALFFIGILPIIFALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEHRIINILLTLAAA 234 (496)
T ss_pred ------cCCH---------HHHHHHHHHHHHHHHHHHHhCCCchhhhhhccccccchhHHHHHhcchhHHHHHHHHHHHH
Confidence 4444 44445544433333334445666543221111110 00000000000000000
Q ss_pred -------hccccccc-------------------ccccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCC
Q 013453 268 -------EGREATPK-------------------KSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYS 321 (442)
Q Consensus 268 -------~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (442)
.......+ ....+.+......+..+...........++|.|+.. ++|++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~-----~~g~~ 309 (496)
T PRK03893 235 AALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKT-----DLGYD 309 (496)
T ss_pred HHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHh-----hcCCC
Confidence 00000000 000000000001111111111111233455666532 36899
Q ss_pred hhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHH
Q 013453 322 TQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSII 401 (442)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (442)
..+.+.+.+...++.+++.+ ..+++.||+++++....+..+..+....+.... ....+. .....+..++.+.+..
T Consensus 310 ~~~~g~~~~~~~~~~~~g~~-~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~ 384 (496)
T PRK03893 310 PHTVANVLFFSGFGAAVGCC-VGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIG---GANVWV-LGLLLFFQQMLGQGIS 384 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcchHHHHHHHHHHHHHHHHHhhcc---ccHHHH-HHHHHHHHHHHhcccc
Confidence 99999999999999999988 777788888988887776655554433322211 111111 1122222222233334
Q ss_pred HhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhcccCCC
Q 013453 402 TGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGA 441 (442)
Q Consensus 402 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i~G~ 441 (442)
+....+..+.+|+++||+++|+.+....+|+.+||.+.|.
T Consensus 385 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~ 424 (496)
T PRK03893 385 GLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGAL 424 (496)
T ss_pred hhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHH
Confidence 5566778888999999999999999999999999988774
No 51
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=100.00 E-value=5.5e-30 Score=238.72 Aligned_cols=341 Identities=18% Similarity=0.221 Sum_probs=246.3
Q ss_pred HHHHHHHHHhHhcchhhchhHHH-HHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHH
Q 013453 44 FSIWIIVLCTALPISSLFPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (442)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~ 122 (442)
..+....++...+.....|.++. +.+++|.+..+ .|++.+.+.++..+.+++.|+++||+|||+++..+.++.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~------~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~ 86 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVM------VGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMR 86 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHH------HHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHH
Confidence 44556677777777777888875 46889999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCC
Q 013453 123 VIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYP 201 (442)
Q Consensus 123 ~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~ 201 (442)
.++.+++.++++++.+++.|+++|++.+...| ..+++.|++|+++|++++++.+...++|..+||.+++++.+
T Consensus 87 ~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~------ 160 (400)
T PRK11646 87 AAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQ------ 160 (400)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------
Confidence 99999999999999999999999999888888 48999999999999999999999999999999999999973
Q ss_pred CcccccccccCCcChhHHHHHHHHHHHHH-HHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhcccccccccccc
Q 013453 202 NLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLK 280 (442)
Q Consensus 202 ~~~gw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (442)
.| |+..+.+.++..++.. +..+.+||.+.. +.+ ++ ....++++++
T Consensus 161 --~g---------~~~~f~~~~~~~~~~~i~~~~~~~~~~~~---~~~--~~------------------~~~~~~~~~~ 206 (400)
T PRK11646 161 --YD---------FRLVCATGAVLFVLAAAFNAWLLPAYKLS---TVR--TP------------------VREGMTRVLR 206 (400)
T ss_pred --hh---------HHHHHHHHHHHHHHHHHHHHHhCCccccc---ccc--hh------------------hHHHHHHHHc
Confidence 23 4444466655554443 333445543211 000 00 0113456678
Q ss_pred cchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHH
Q 013453 281 NWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIA 360 (442)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (442)
+|+++...+..+...........+.|.|..+ .+.++.+.+.+.+..++..........++.+||.+.++....+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~------~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 280 (400)
T PRK11646 207 DKRFVTYVLTLTGYYMLAVQVMLMLPIMVND------IAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAG 280 (400)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHhhhhhHHh------hcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHH
Confidence 8887665554444333333333445554432 2346778888888877777766666778888877666655666
Q ss_pred HHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhcccCC
Q 013453 361 GVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGG 440 (442)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i~G 440 (442)
..+..+...++...+ ..+... ......+.......+...++..+..|+++||++.|+.+....+|..+||.+.|
T Consensus 281 ~~~~~~~~~~l~~~~-----~~~~~~-~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G 354 (400)
T PRK11646 281 LLIMSLSMFPIGMVS-----NLQQLF-TLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGG 354 (400)
T ss_pred HHHHHHHHHHHHHhh-----hHHHHH-HHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchH
Confidence 555555554443322 112111 11222223333455677888889999999999999999999999999999988
Q ss_pred CC
Q 013453 441 AL 442 (442)
Q Consensus 441 ~l 442 (442)
++
T Consensus 355 ~l 356 (400)
T PRK11646 355 WL 356 (400)
T ss_pred HH
Confidence 63
No 52
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=100.00 E-value=8.5e-30 Score=238.12 Aligned_cols=349 Identities=13% Similarity=0.141 Sum_probs=244.7
Q ss_pred ChhhHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHH
Q 013453 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (442)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~ 118 (442)
+++.++......++..+......|.+|.+.+++|.++.+ .+++.+.+.++..++++++|+++||+|||+++..+
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~ 79 (394)
T PRK11652 6 NVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGA------VQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVG 79 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHH
Confidence 455566666666677777788889999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhcccc
Q 013453 119 TASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (442)
Q Consensus 119 ~~~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 197 (442)
.++..++.+++.++++++.+++.|++.|++.+...+ ...+..|.+++++|+++.+..+.+..+|..++|.+++.+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~-- 157 (394)
T PRK11652 80 MSIFILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTT-- 157 (394)
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--
Confidence 999999999999999999999999999999888777 47888999999999999999999999999999999999987
Q ss_pred ccCCCcccccccccCCcChhHHHHHHHHHHHH-HHHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhcccccccc
Q 013453 198 EKYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKK 276 (442)
Q Consensus 198 ~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (442)
..+|+..+.+.++..++. .+..++.||+++.++++++ ....++
T Consensus 158 --------------~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~ 201 (394)
T PRK11652 158 --------------LFGWRACYLFLLLLGAGVTFSMARWMPETRPADARRTR----------------------VLASYR 201 (394)
T ss_pred --------------ccChHHHHHHHHHHHHHHHHHHHHhCCccCccccchhH----------------------HHHHHH
Confidence 344555556666555444 3344567776432211100 012234
Q ss_pred cccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHH
Q 013453 277 SLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMV 356 (442)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (442)
+.+++|.++...+..+........+....+.++. +.+|+++.+.+++.....++.+++.. ..+++.||.+++..
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~g~~~~~~~~~~~~~~~~~~~g~~-~~~~l~~~~~~~~~ 275 (394)
T PRK11652 202 TLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMG-----AVLGLSSMTVSILFILPIPAAFFGAW-FAGRPNKRFSTLMW 275 (394)
T ss_pred HHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHH-----HHcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 5677777766555444433333333333333332 22688999999988887888888877 56666666553322
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhc
Q 013453 357 ARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGP 436 (442)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp 436 (442)
.. .....+....+...........+. ........+.......+.......+..| +++|++.++.+....+|..+++
T Consensus 276 ~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~ 351 (394)
T PRK11652 276 QS--VICCLLAGLLMWIPGWFGVMNVWT-LLVPAALFFFGAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAA 351 (394)
T ss_pred HH--HHHHHHHHHHHHHHHHhccccHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHH
Confidence 22 122222211111111111111222 2222233333444556777777777776 6889999999999999999999
Q ss_pred ccCCC
Q 013453 437 AGGGA 441 (442)
Q Consensus 437 ~i~G~ 441 (442)
.++|.
T Consensus 352 ~~~~~ 356 (394)
T PRK11652 352 LLSAM 356 (394)
T ss_pred HHHHH
Confidence 88764
No 53
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=100.00 E-value=8.4e-30 Score=238.26 Aligned_cols=355 Identities=14% Similarity=0.157 Sum_probs=242.4
Q ss_pred ChhhHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHH
Q 013453 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (442)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~ 118 (442)
.+|.+...+++.++.........+.++.+.+|+|.++.+ .|++.+.+.+++.+++++.|+++||+||||++..+
T Consensus 11 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~------~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~ 84 (402)
T TIGR00897 11 IPLNLLWGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQ------SASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIG 84 (402)
T ss_pred CCchhhHHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHH------hHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHH
Confidence 345666777788887777777777888888999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH---hc-cchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHH-HHHHHhhhh
Q 013453 119 TASVVIFNTLF---GL-SVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGL-IIGPALGGF 192 (442)
Q Consensus 119 ~~~~~i~~~~~---~~-a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~-~~g~~~~~~ 192 (442)
.++.+++.+++ ++ .++++.+++.|++.|++.+...+ ..+.+.|++|+|+|++++|+.+.+.++|. .++|.+++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~ 164 (402)
T TIGR00897 85 LLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSY 164 (402)
T ss_pred HHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99998887655 23 35888999999999999877766 57888999999999999999999999997 689999999
Q ss_pred hccccccCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhcccc
Q 013453 193 LAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREA 272 (442)
Q Consensus 193 l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (442)
+.+ .+||+..+ |+..+.. .+...+..+..+|.+++.++++ +++. ++..
T Consensus 165 l~~-------~~g~~~~~----~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~--~~~~---------------~~~~ 212 (402)
T TIGR00897 165 AIP-------AFGEMNTL----WSALAFV----LTGGVIALFSNKDIFTPQHMQT--REKF---------------SELG 212 (402)
T ss_pred ccc-------ccchHHHH----HHHHHHH----HHHHHHHHhccCCCCCcccccC--Ccch---------------hhHH
Confidence 887 45543322 3322211 1112223333444322111100 0000 0001
Q ss_pred cccccccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhc
Q 013453 273 TPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG 352 (442)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (442)
+..+.++|+|+++...+..++......+...+.|.|... +|++..+.+.......++..++.+ ..+++.||.+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~------~g~s~~~~~~~~~~~~~~~~ig~~-~~g~l~dr~~ 285 (402)
T TIGR00897 213 KAATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAE------LGFSTSEWLQIWGTFFFTNIVFNV-IFGIVGDKLG 285 (402)
T ss_pred HHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCChhHHHHHHHHHHHHHHHHHH-HHHHHHHhhc
Confidence 124467889998887777777666667777777766532 588888999888888899999998 5566777778
Q ss_pred hhHHHH-HHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHH
Q 013453 353 PIMVAR-IAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLF 431 (442)
Q Consensus 353 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 431 (442)
||+... .+.....+....+...........+.. .+..+..+.......+ ......+. ++++||++.|+.+...++|
T Consensus 286 ~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~G~~~~~~~~-~~~~~~~~-~~~~~g~~~g~~~~~~~lg 362 (402)
T TIGR00897 286 WMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVA-LIIAIALGIFLAGYVP-LAAVFPTL-APKHKGAAMSVLNLSAGLS 362 (402)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHH-HHHHHHHHHHHHHHHH-HHHHHHhh-CcchhHHHHHHHHHHHHHH
Confidence 776653 222223332222222221111112221 2222222223233333 33445564 5578999999999999999
Q ss_pred HhhhcccCCC
Q 013453 432 KAAGPAGGGA 441 (442)
Q Consensus 432 ~~~gp~i~G~ 441 (442)
+.++|.+.|.
T Consensus 363 ~~~gp~i~g~ 372 (402)
T TIGR00897 363 AFLAPAIAVL 372 (402)
T ss_pred HHHHHHHHHH
Confidence 9999998775
No 54
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.98 E-value=8.5e-30 Score=233.20 Aligned_cols=353 Identities=20% Similarity=0.189 Sum_probs=259.2
Q ss_pred HHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhc---cchHHHHHHHHHH
Q 013453 68 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL---SVNFWMAVLTRFL 144 (442)
Q Consensus 68 ~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~---a~~~~~l~~~r~l 144 (442)
.+.+|...++++.+...+.+.+++.+|.++|++..|+++||+|||..++++.++..++.+++.+ ++++.+++++|++
T Consensus 46 ~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i 125 (485)
T KOG0569|consen 46 IERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLI 125 (485)
T ss_pred HHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 3556766777778888999999999999999999999999999999999999888888877765 5789999999999
Q ss_pred HHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCcccccccccCCcChhHHHHHH
Q 013453 145 LGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCIS 223 (442)
Q Consensus 145 ~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~ 223 (442)
.|+..|.... ..-++.|..|++.||..-.+.+.+..+|.+++..++.--. +|- ...|+..+....
T Consensus 126 ~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~i---------lGt-----~~~W~~l~~~~~ 191 (485)
T KOG0569|consen 126 VGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSL---------LGT-----EDLWPYLLAFPL 191 (485)
T ss_pred HHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHh---------cCC-----CcchHHHHHHHH
Confidence 9999999888 5999999999999999999999999999999876663322 221 334666667788
Q ss_pred HHHHHHHHHHhhccccCCCCCC-CCccchhh--hhhhhhh----------hhhhhhh--hcccccccccccccchhHHHH
Q 013453 224 LFAFGVTIAAFWLPETLHRHND-DDDSCDVS--YDALESA----------SAEVKEE--EGREATPKKSLLKNWPLMSSI 288 (442)
Q Consensus 224 ~~~~~~~~~~~~~~e~~~~~~~-~~~~~~~~--~~~~~~~----------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 288 (442)
+++++..+...++||+|++.-. +++++++. .+..... .++.+++ ++++..+.+++++++..+...
T Consensus 192 i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~ 271 (485)
T KOG0569|consen 192 IPALLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPL 271 (485)
T ss_pred HHHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHH
Confidence 8888888889999999998544 22222221 1111111 1111111 122556788999998877654
Q ss_pred HHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHHHHHHHH
Q 013453 289 IVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLL 368 (442)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (442)
...+.....+ .+....+.++++....++.|++..++-+.....++..++..+ ++.++.||.|||+++..+...+.+..
T Consensus 272 ~i~~~v~~~q-q~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~-~~~~lid~~gRRpLll~~~~~~~~~~ 349 (485)
T KOG0569|consen 272 LIGIVVSFAQ-QFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTL-VSPFLIDRLGRRPLLLISLSLMAVAL 349 (485)
T ss_pred HHHHHHHHHH-HhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCCcHHHHHHHHHHHHHH
Confidence 3333322221 122233333333444556799999999999999999999998 88888888999999999988888876
Q ss_pred HHHHHHHHhhchh-hH---HHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhc
Q 013453 369 TSYPYIAMLSGFG-LA---FLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGP 436 (442)
Q Consensus 369 ~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp 436 (442)
.++.......+.. .| ..+.....+...+..+.+|..+.+.+|++|++.|..++++..+...+..++-.
T Consensus 350 ~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~ 421 (485)
T KOG0569|consen 350 LLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVG 421 (485)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHH
Confidence 6665544333222 22 22344444555667778899999999999999999999999999888776543
No 55
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.98 E-value=2.2e-30 Score=240.00 Aligned_cols=357 Identities=13% Similarity=0.090 Sum_probs=242.2
Q ss_pred HHHHHHHHHHhHhcchhhchhHHH-HHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHH
Q 013453 43 LFSIWIIVLCTALPISSLFPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (442)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~ 121 (442)
.+..++..++.........+..|. +.+++|.++.+ .+++.+.+.+++.+++++.|+++||+|||++++++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 76 (366)
T TIGR00886 3 LFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQ------LGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLL 76 (366)
T ss_pred hHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHH------hhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHH
Confidence 455677777778888888999995 88999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccc-hHHHHHHHHHHHHhhcchhhHHHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccc--
Q 013453 122 VVIFNTLFGLSV-NFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE-- 198 (442)
Q Consensus 122 ~~i~~~~~~~a~-~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~-- 198 (442)
..++.+++++++ +++.+++.|+++|++.+...+..+++.|++|+++|+++.++.....++|..+++.+++.+.....
T Consensus 77 ~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~ 156 (366)
T TIGR00886 77 LAIPCLWAGLAVQSYSVLLLLRLFIGIAGGSFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFG 156 (366)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhchhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999 99999999999999877665578899999999999999999998888888888887776654210
Q ss_pred -cCCCcccccccccCCcChhHHHHHHHHH-HHHHHHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhcccccccc
Q 013453 199 -KYPNLFSSESLFGKFPYFLPCLCISLFA-FGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKK 276 (442)
Q Consensus 199 -~~~~~~gw~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (442)
+.+...+||+.+ . ...++.. +...+.....+|+++.++++++...+. . ..+ .+++.....+
T Consensus 157 ~~~~~~~~w~~~~-----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~---~~~~~~~~~~ 219 (366)
T TIGR00886 157 AGLPAHLAWGWAF-----V---IVPAGILLLPALLIFFVGADTPPGKPATGKLSFKG--A----RWS---VGTGALGDQL 219 (366)
T ss_pred ccccccccccchh-----H---HHHHHHHHHHHHHHHHhcccCCcccccchhccccc--c----ccc---ccchhHHHHH
Confidence 001123444332 0 2223322 233344455566554321111100000 0 000 0000111345
Q ss_pred cccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHH
Q 013453 277 SLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMV 356 (442)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (442)
+.+++|+++...+..++..........+.+.|..+ .+|+++.+.+.+.....+..+++.+ +.+++.||+++|+.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~~~~-~~g~l~~r~g~~~~ 293 (366)
T TIGR00886 220 KVFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKD-----QFGLSKVTAGAYASLGGLLGSLARP-LGGAISDRLGGARK 293 (366)
T ss_pred HHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHH-----HcCCcHHHHHHHHHHHHHHHHHHhh-ccchHHHhhccchh
Confidence 67788888877777666666666666777776653 3688999999888888888888887 67778888888877
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHH
Q 013453 357 ARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLF 431 (442)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 431 (442)
...+......+..++........ ..+... .................+....+..| +++|++.|+.+..+++|
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 294 LLMSFLGVAMGAFLVVLGLVSPL-SLAVFI-VLFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcc-hHHHHH-HHHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 76666555554444433211100 111111 11111111222233445566667666 79999999999888765
No 56
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.98 E-value=1.6e-29 Score=235.12 Aligned_cols=336 Identities=20% Similarity=0.225 Sum_probs=237.2
Q ss_pred hcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhccch
Q 013453 55 LPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVN 134 (442)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a~~ 134 (442)
++..+..|.+|.+.+++|.++.+ .+++.+.+.++..++++++|+++||+|||+++..+.++.+++.+++.++++
T Consensus 5 ~~~~~~~p~~~~~~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~ 78 (377)
T PRK11102 5 LAIDMYLPALPVIAADFGVSAGS------VQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQT 78 (377)
T ss_pred hHHHHHhccHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHcc
Confidence 34566779999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCcccccccccCC
Q 013453 135 FWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKF 213 (442)
Q Consensus 135 ~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~ 213 (442)
++.+++.|++.|++.+...+ ..+++.|++|+++|++++++.+....+|..++|.+++.+.+ .+
T Consensus 79 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~----------------~~ 142 (377)
T PRK11102 79 IDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLV----------------WF 142 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------Hc
Confidence 99999999999999888877 58999999999999999999999999999999999999987 34
Q ss_pred cChhHHHHHHHHHHHHH-HHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhcccccccccccccchhHHHHHHHH
Q 013453 214 PYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYC 292 (442)
Q Consensus 214 ~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (442)
+|+..+.+.+++.++.. ...+++||+++.+++++.+.+ +.....++.++++.++...+...
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~ 204 (377)
T PRK11102 143 SWHAIFWVLALAAILAAALVFFFIPETLPKERRQPFHLR------------------TTIRNFASLFRHKRVLGYMLASG 204 (377)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhCCccCcccccCCCChH------------------HHHHHHHHHHcChHHHHHHHHHH
Confidence 45555566666655543 344566775432211110000 00112345677887776655554
Q ss_pred HHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHHHHHHHHHHHH
Q 013453 293 VFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYP 372 (442)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (442)
+.......+..+.+.++. +.+|+++.+.+.......++.+++.. ..+++.||.++|+....+..+..+....+.
T Consensus 205 ~~~~~~~~~~~~~~~~~~-----~~~g~s~~~~g~~~~~~~~~~~~~~~-~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~ 278 (377)
T PRK11102 205 FSFAGMFSFLTAGPFVYI-----ELNGVSPQNFGYYFALNIVFLFVMTI-INSRFVRRVGALNMLRFGLWIQFIMGIWLV 278 (377)
T ss_pred HHHHHHHHHHHcCHHHHH-----HHhCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 444433333333333332 23688999999999999999999988 666777888999888877765444333222
Q ss_pred HHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHH-HHHhhhcccC
Q 013453 373 YIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMS-LFKAAGPAGG 439 (442)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~-~g~~~gp~i~ 439 (442)
.....+ ...+.......... ...............+..| +.++++.++.+.... +|..+++.+.
T Consensus 279 ~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~ 343 (377)
T PRK11102 279 VSALLD-LGFWALVVGVAAFV-GCVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLS 343 (377)
T ss_pred HHHHHh-hhHHHHHHHHHHHH-HHHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 221111 11222222222221 1222233334455566555 889999999877654 6666666554
No 57
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.97 E-value=3.1e-29 Score=233.11 Aligned_cols=336 Identities=15% Similarity=0.145 Sum_probs=235.6
Q ss_pred HHHHHhHhcchhhchhHHHH-HHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHH-HHHHHHHH
Q 013453 48 IIVLCTALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM-GTASVVIF 125 (442)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~-~~~~~~i~ 125 (442)
+..++..++.+...|.+|.+ .+++|.++.+ .|++.+++.+...+.+++.|+++||+||||.++. +..+..++
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~ 77 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAM------IGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALA 77 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHH
Confidence 45677778888889999875 5789999999 9999999999999999999999999999887654 56666777
Q ss_pred HHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhh--hhhhhHhhhhHHHHHHHhhhhhccccccCCC
Q 013453 126 NTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALG--LSTVSTAWGIGLIIGPALGGFLAQPAEKYPN 202 (442)
Q Consensus 126 ~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~--~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~ 202 (442)
.++++++++++.+++.|++.|.+.+...| ..+++.|+.|+++|++. .+....+.++|.+++|.+++.+.+
T Consensus 78 ~~~~~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~------- 150 (375)
T TIGR00899 78 CLLFAWNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLAL------- 150 (375)
T ss_pred HHHHHhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHH-------
Confidence 88889999999999999999987777777 47888898888777754 578888889999999999999987
Q ss_pred cccccccccCCcChhHHHHHHHHHHHHHH-HHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhccccccccccccc
Q 013453 203 LFSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKN 281 (442)
Q Consensus 203 ~~gw~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (442)
..+||..+.+.+++.++..+ ..+++||+|++.+++++ ..+.++.+++
T Consensus 151 ---------~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~ 198 (375)
T TIGR00899 151 ---------GFGFTVMFLTAALAFVLCGVLVWLFLPSYPRGAPGALT-----------------------RLEVRGLLAS 198 (375)
T ss_pred ---------hcccHHHHHHHHHHHHHHHHHHHHhCCCcccCcccccC-----------------------cchhhhhhcC
Confidence 44556566777776665544 34557876543221110 0011235566
Q ss_pred chhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHH
Q 013453 282 WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAG 361 (442)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (442)
++++......++...........++.|+. +.+|.++.+.+...........++.. ..+++.||.++|+....+.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~g~~~~~~g~~~~~~~~~~~~~~~-~~g~l~~r~g~~~~~~~~~ 272 (375)
T TIGR00899 199 RDTRLLFVACTLMWGCNILYIINMPLLII-----HELGLPDKLAGLMMGTAAGLEIPFML-LAGYLIKRFGKRRLMLLAA 272 (375)
T ss_pred cchHHHHHHHHHHHHHHHHHHhhhHHHHH-----HHcCCCHHHHHHHHHHHHHHHHHHHH-hHHHHHHHhcchhHHHHHH
Confidence 66665555444444333334445555543 23688888898888776666666666 6667778889888877766
Q ss_pred HHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhcccCCC
Q 013453 362 VLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGA 441 (442)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i~G~ 441 (442)
....+....+.... ..+.. .....+.+.......+.......|..|+ +++++.++.+...++|..++|.+.|.
T Consensus 273 ~~~~~~~~~~~~~~-----~~~~~-~~~~~~~g~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~ 345 (375)
T TIGR00899 273 LAGVAFYTGLAADN-----SLWAL-LMLQLLNAIFIGILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGI 345 (375)
T ss_pred HHHHHHHHHHHHHH-----HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55444433332221 12222 2222222333334455666777787765 56799999999999999999998774
No 58
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.97 E-value=3.2e-30 Score=243.75 Aligned_cols=366 Identities=14% Similarity=0.033 Sum_probs=237.3
Q ss_pred HHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHH
Q 013453 44 FSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVV 123 (442)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~ 123 (442)
+...+................|.+.+ +|.++++ .+++.+++.++..+++++.|+++||+|||+++..+.++.+
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~------~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~ 102 (438)
T TIGR00712 30 LGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGE------LGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSA 102 (438)
T ss_pred HHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhH------hHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHH
Confidence 34444555555555556666777765 6999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHHhcc----chHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccc
Q 013453 124 IFNTLFGLS----VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (442)
Q Consensus 124 i~~~~~~~a----~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 198 (442)
++.++.++. ++++.+.+.|++.|++.|...+ ....+.|++|+++|++++++.+.+.++|..++|.+.+...+.
T Consensus 103 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~-- 180 (438)
T TIGR00712 103 AVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAW-- 180 (438)
T ss_pred HHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHH--
Confidence 998887764 4678888999999999888777 588899999999999999999999999999998887765541
Q ss_pred cCCCcccccccccCCcChhHHHHHHHHHHHH-HHHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhccccc-ccc
Q 013453 199 KYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREAT-PKK 276 (442)
Q Consensus 199 ~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 276 (442)
.. +||..+.+.++..++. ++..+++||+|+..+.++.++.+. +..++ ..++++++.+.+. ..+
T Consensus 181 ----~~---------~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~ 245 (438)
T TIGR00712 181 ----FN---------DWHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEEYRN-DYPDD-YNEKAEQELTAKEIFMQ 245 (438)
T ss_pred ----hh---------hhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchhccc-ccccc-cccccccccchHHHHHH
Confidence 23 4555557766666554 445566787664321111000000 00000 0000000000000 112
Q ss_pred cccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHH
Q 013453 277 SLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMV 356 (442)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (442)
.++|++.++...+..++......+...+.|.|+... .|+++.+.+....+..+..+++.+ ..+++.||.++++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-----~g~s~~~~~~~~~~~~~~~~ig~~-~~g~l~dr~~~~~~ 319 (438)
T TIGR00712 246 YVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEV-----KHFALDKSSWAYFLYEYAGIPGTL-LCGWMSDKVFKGNR 319 (438)
T ss_pred HHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHc-----cCCChhhHHHHHHHHHHHHHHHHH-HHHHHHHHhccCcc
Confidence 467888888887776666666667777788777643 588999999998888899999988 66667777643221
Q ss_pred HHHHHHHHHHHH-HHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHH-hh
Q 013453 357 ARIAGVLTIPLL-TSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFK-AA 434 (442)
Q Consensus 357 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~-~~ 434 (442)
...+........ ....+.... ....+... ...+..+....+..........|..|++.||++.|+.+...+.|+ ++
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~ 397 (438)
T TIGR00712 320 GATGVFFMTLVTIAVIVYWMNP-AGNPLVDM-ICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVA 397 (438)
T ss_pred cHHHHHHHHHHHHHHHHHHhcC-CCchHHHH-HHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhh
Confidence 112222211111 111111111 11112111 111111111111112223456788999999999999999988875 68
Q ss_pred hcccCCC
Q 013453 435 GPAGGGA 441 (442)
Q Consensus 435 gp~i~G~ 441 (442)
+|.+.|.
T Consensus 398 gp~l~G~ 404 (438)
T TIGR00712 398 ASAIVGY 404 (438)
T ss_pred cchhHHH
Confidence 9988875
No 59
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.97 E-value=1.5e-29 Score=237.83 Aligned_cols=354 Identities=20% Similarity=0.296 Sum_probs=244.4
Q ss_pred hhHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHH
Q 013453 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (442)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~ 120 (442)
+....+++..++..+......+.+|.+.+++|.+..+. ...+.|++.+++.++..++++++|+++||+|||+++..+.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 92 (408)
T PRK09874 14 RNLTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSA-LNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSAL 92 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchh-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHH
Confidence 44556778888888888899999999999999886541 01125899999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccchHHHHHHHHHHHHhhcchhhHHHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccC
Q 013453 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKY 200 (442)
Q Consensus 121 ~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~ 200 (442)
+..++.+++.++++++.+++.|++.|++.+...+...++.|++|+++|+++.++.+.+..+|..++|.+++.+.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~----- 167 (408)
T PRK09874 93 GMGIVMVLMGLAQNIWQFLILRALLGLLGGFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLAD----- 167 (408)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Confidence 999999999999999999999999999866543357889999999999999999999999999999999999987
Q ss_pred CCcccccccccCCcChhHHHHHHHHHHHHHH-HHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhccccccccccc
Q 013453 201 PNLFSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLL 279 (442)
Q Consensus 201 ~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (442)
.. +|+..+.+.+++.++..+ ..+++||++++.++++ ..+. +...+.+
T Consensus 168 --~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-------------------~~~~~~~ 215 (408)
T PRK09874 168 --SY---------GLRPVFFITASVLFLCFLVTLFCIRENFQPVSKKE--MLHM-------------------REVVTSL 215 (408)
T ss_pred --Hh---------CHHHHHHHHHHHHHHHHHHHHHHhccCcccccchh--hhHH-------------------HHHHHhC
Confidence 33 445444666665555443 3455666532211110 0000 0112345
Q ss_pred ccchhHHHH-HHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHH
Q 013453 280 KNWPLMSSI-IVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVAR 358 (442)
Q Consensus 280 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (442)
++++++... ....+..........+++.|..... .+........+.+....+++.+++.. ..+++.||.+|++.+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~l~~~~~~~-~~g~l~dr~g~~~~~~ 292 (408)
T PRK09874 216 KNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELA--GNVSNIAFISGMIASVPGVAALLSAP-RLGKLGDRIGPEKILI 292 (408)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccchHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhccccchhHH
Confidence 566654432 2223333333334445555544210 00010112345566666777777776 6667788889988888
Q ss_pred HHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhccc
Q 013453 359 IAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAG 438 (442)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i 438 (442)
.+.....+..+...... ..+. ..+..++.+.+.....+.......+..|++.+|+..++.+....+|..+||.+
T Consensus 293 ~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~ 366 (408)
T PRK09874 293 TALIFSVLLLIPMSFVQ-----TPLQ-LGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLM 366 (408)
T ss_pred HHHHHHHHHHHHHHHhc-----cHHH-HHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHH
Confidence 77766655554433321 1222 22222333344445566677777788899999999999999999999999998
Q ss_pred CCC
Q 013453 439 GGA 441 (442)
Q Consensus 439 ~G~ 441 (442)
+|.
T Consensus 367 ~G~ 369 (408)
T PRK09874 367 GAA 369 (408)
T ss_pred HHH
Confidence 875
No 60
>PRK10054 putative transporter; Provisional
Probab=99.97 E-value=1.4e-29 Score=235.52 Aligned_cols=346 Identities=15% Similarity=0.172 Sum_probs=249.6
Q ss_pred hhHHHHHHHHHHhHhcchhhchhHHHH-HHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHH
Q 013453 41 TELFSIWIIVLCTALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (442)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~ 119 (442)
|.++.+.+..++...+.+...+.+|.+ .+++|.+..+ .|++.+.+.++..+++++.|+++||+|||++++++.
T Consensus 7 ~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~------~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~ 80 (395)
T PRK10054 7 RSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDL------IGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAI 80 (395)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHH
Confidence 446666677888888888888888765 4679999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccc
Q 013453 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (442)
Q Consensus 120 ~~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 198 (442)
++..++.++.+++++++.+++.|++.|.+.+...+ ..++..|.+|+++|++++++.+...++|.+++|.+++++.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~--- 157 (395)
T PRK10054 81 TAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM--- 157 (395)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---
Confidence 99999999999999999999999998887777777 48999999999999999999999999999999999998863
Q ss_pred cCCCcccccccccCCcChhHHHHHHHHHHHHHH-HHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhccccccccc
Q 013453 199 KYPNLFSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKS 277 (442)
Q Consensus 199 ~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (442)
.||+ .++.+.+++.++..+ ..+++||+++++++++ ++ ....++
T Consensus 158 -----~g~~---------~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~---~~-------------------~~~~~~ 201 (395)
T PRK10054 158 -----QSIN---------LPFWLAAICSAFPLVFIQIWVQRSEKAIATET---GS-------------------VWSPSV 201 (395)
T ss_pred -----hccC---------cHHHHHHHHHHHHHHHHHHHHhccccccccch---hh-------------------hhhhhh
Confidence 2344 444666655555433 3344565432211100 00 011256
Q ss_pred ccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHH
Q 013453 278 LLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVA 357 (442)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (442)
.+|+|+++...+..++.......+..+.+.|.... ++.+.+....+.......+.....+...+++. ||.++|+.+
T Consensus 202 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~l 277 (395)
T PRK10054 202 LLQDKALLWFTCSGFLASFVSGAFASCISQYVMVV---ADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRL-NAANIRPLM 277 (395)
T ss_pred hccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHh---cccchHHHHHHHHHHhhhhheeeehhHHHHHH-ccCCchhHH
Confidence 78889988777776666655555545555554322 23466777788888777777666666444544 455778877
Q ss_pred HHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhcc
Q 013453 358 RIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPA 437 (442)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~ 437 (442)
..+..+..+....+.... + ..+. ..+.....+.+.....|.....+.+..|++.++++.+..+ ...+|.++||.
T Consensus 278 ~~~~~~~~~~~~~~~~~~--~--~~~~-~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~ 351 (395)
T PRK10054 278 TAGTLCFVIGLVGFIFSG--N--SLLL-WGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPL 351 (395)
T ss_pred HHHHHHHHHHHHHHHHcc--h--HHHH-HHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHH
Confidence 777666666655443321 1 1221 1222233333444445677788888899999999999765 67789999999
Q ss_pred cCCC
Q 013453 438 GGGA 441 (442)
Q Consensus 438 i~G~ 441 (442)
++|+
T Consensus 352 ~~G~ 355 (395)
T PRK10054 352 VSGV 355 (395)
T ss_pred HHHH
Confidence 8875
No 61
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.97 E-value=4.4e-29 Score=232.56 Aligned_cols=360 Identities=13% Similarity=0.079 Sum_probs=255.5
Q ss_pred hHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHH
Q 013453 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (442)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~ 121 (442)
.+..++...++.++..+...+.+|.+++++|.+..+ .|++.+.+.+++.+++++.|++.||+|||+++..+.++
T Consensus 4 ~~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~------~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l 77 (410)
T TIGR00885 4 PFALITSLFALWGFANDITNPMVPQFQQAFTLTAFQ------AALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFL 77 (410)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHH
Confidence 355677777888888888899999999999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHhc---cchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhcccc
Q 013453 122 VVIFNTLFGL---SVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (442)
Q Consensus 122 ~~i~~~~~~~---a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 197 (442)
++++.+++.. .++++.+++.|++.|+|.|...+ ...++.+..|+++|++.+++.+...++|..++|.+++.+....
T Consensus 78 ~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~ 157 (410)
T TIGR00885 78 YALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSN 157 (410)
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999988644 46899999999999999999888 5899999999999999999999999999999999999886421
Q ss_pred ccCCC-ccccccc---------ccCCcChhHHHHHHHHHHHHHHHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhh
Q 013453 198 EKYPN-LFSSESL---------FGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEE 267 (442)
Q Consensus 198 ~~~~~-~~gw~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (442)
..... ..-++.. -...+||.++.+.+++.++..+...+.++++.++++ ++ +
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~~~--~~-~---------------- 218 (410)
T TIGR00885 158 LPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPALNHSD--AK-Q---------------- 218 (410)
T ss_pred CccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc--cc-c----------------
Confidence 00000 0000000 002347777777777666554443333222111100 00 0
Q ss_pred hcccccccccccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHH
Q 013453 268 EGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFL 347 (442)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (442)
.+.....++++|+|.++...+..+++.....+..++++.|.... ..+.+....+...........++++ ++.++
T Consensus 219 -~~~~~~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~----~~~~~~~~a~~~~~~~~~~~~vGR~-~~~~l 292 (410)
T TIGR00885 219 -ISFSASLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRL----IPGMTAGFAANYNIGAMVIFFISRF-IGTWL 292 (410)
T ss_pred -ccchhhHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 00111334678888888888888888777777777777776431 1234444445455555566777777 77788
Q ss_pred HHhhchhHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHH
Q 013453 348 ERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTG 427 (442)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 427 (442)
.||.++++.+.+......+..++..... +.. ........+++....+|..++...+..+++.+..+.++....
T Consensus 293 ~~r~~~~~~l~i~~~~~~~~~ll~~~~~---~~~----~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~~ 365 (410)
T TIGR00885 293 ISYLAAHKVLMAYAIIGMALCLGSIFAG---GHV----GLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMAI 365 (410)
T ss_pred HHHcCHHHHHHHHHHHHHHHHHHHHHcC---ChH----HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHH
Confidence 8888988888877777777666655432 111 112222333455667799999999989877665555555544
Q ss_pred HHHHHhhhcccCCC
Q 013453 428 MSLFKAAGPAGGGA 441 (442)
Q Consensus 428 ~~~g~~~gp~i~G~ 441 (442)
+|+++.|.+.|+
T Consensus 366 --~Gga~~p~l~G~ 377 (410)
T TIGR00885 366 --IGGGIVPPLQGF 377 (410)
T ss_pred --hccchHHHHHHH
Confidence 999999998875
No 62
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.97 E-value=9.3e-29 Score=229.60 Aligned_cols=340 Identities=13% Similarity=0.089 Sum_probs=248.1
Q ss_pred HHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhh----HHHH
Q 013453 44 FSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVI----IMGT 119 (442)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~----~~~~ 119 (442)
..+.+..+...+..+...|.+|.+.+++|.+..+ +|++.+.+.+...++++++|+++||+|||+.. ..+.
T Consensus 7 ~~l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~------ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 80 (382)
T TIGR00902 7 RWLALGFFGYFCAYGIFLPFFPAWLKGIGLGEEM------IGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALAS 80 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 3456667777778889999999999999999999 99999999999999999999999999985433 2222
Q ss_pred HHHHHHHHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccc
Q 013453 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (442)
Q Consensus 120 ~~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 198 (442)
.+..+ ..+..+++++.+++.|+++|.+.+...| ..++..|+ +++|++.++......++|.+++|++++.+.+
T Consensus 81 ~l~~~--~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~--- 153 (382)
T TIGR00902 81 AIFAA--AFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIG--- 153 (382)
T ss_pred HHHHH--HHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHH---
Confidence 22222 2444678999999999999998777777 46666554 4789999999999999999999999999998
Q ss_pred cCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhcccccccccc
Q 013453 199 KYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSL 278 (442)
Q Consensus 199 ~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (442)
.+|||. .+.+.....++.. ..+.++|++++++++++ + +.+..+..+++
T Consensus 154 ----~~g~~~---------~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~----------------~~~~~~~~~~~ 201 (382)
T TIGR00902 154 ----MFDEQN---------ILAILTAGLAFML-IGFLIKPTIPPKDAIPE--D----------------ESQGDSAFIAL 201 (382)
T ss_pred ----HcChhH---------HHHHHHHHHHHHH-HHHHcCCCCCCCccccc--c----------------ccccchhHHHH
Confidence 445544 3355443322222 23333443211111000 0 00112235678
Q ss_pred cccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHH
Q 013453 279 LKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVAR 358 (442)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (442)
+|+|+++...+..++.......+.++.+.|..+ .|.++.+.|.+.....++.++... ..+++.||+++++.+.
T Consensus 202 l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~------~g~s~~~~g~l~~~~~~~~i~~~~-~~~~l~~r~g~~~~l~ 274 (382)
T TIGR00902 202 LKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA------AGISASATGLLWGIGVLAEIIIFA-FSNKLFQNCSARDLLL 274 (382)
T ss_pred HcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------CCCCHhHHHHHHHHHHHHHHHHHH-HhHHHHhhCCHHHHHH
Confidence 899999998888888888877888888877642 588999999999987888888776 7777788889999998
Q ss_pred HHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHH-HHHHHHhhhcc
Q 013453 359 IAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMT-GMSLFKAAGPA 437 (442)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~-~~~~g~~~gp~ 437 (442)
.+.+...+....+.+.+ ..+ .++....+.+.......+....++++. |++++++++++++. ...+|..+||.
T Consensus 275 ~~~~~~~~~~~~~~~~~-----~~~-~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~ 347 (382)
T TIGR00902 275 ISAIACVGRWAIIGAIE-----AFP-LIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTA 347 (382)
T ss_pred HHHHHHHHHHHHHHhHh-----hHH-HHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888877665532 122 233344555555556666777788887 99999999999874 56789999999
Q ss_pred cCCCC
Q 013453 438 GGGAL 442 (442)
Q Consensus 438 i~G~l 442 (442)
++|++
T Consensus 348 ~~G~l 352 (382)
T TIGR00902 348 FAGFI 352 (382)
T ss_pred HHHHH
Confidence 88864
No 63
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.97 E-value=1.8e-28 Score=229.01 Aligned_cols=281 Identities=20% Similarity=0.212 Sum_probs=213.2
Q ss_pred HHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHH
Q 013453 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (442)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i 124 (442)
......+....+.+...+.+|.+.+++|.++.+ .++..+.+.++..+++++.|+++||+|||++++.+.++..+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i 80 (392)
T PRK10473 7 CSFALVLLYPAGIDMYLVGLPRIAADLNASEAQ------LHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFII 80 (392)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHH
Confidence 445566677777778889999999999999998 99999999999999999999999999999999999999999
Q ss_pred HHHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCc
Q 013453 125 FNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNL 203 (442)
Q Consensus 125 ~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~ 203 (442)
+.+++..+++++.+++.|+++|++.+...+ ..+++.|++|+++|++++++.+....+|..++|.+++.+.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~-------- 152 (392)
T PRK10473 81 ASLLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIML-------- 152 (392)
T ss_pred HHHHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------
Confidence 999999999999999999999999888777 59999999999999999999999999999999999998876
Q ss_pred ccccccccCCcChhHHHHHHHHHHHHH-HHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhcccccccccccccc
Q 013453 204 FSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNW 282 (442)
Q Consensus 204 ~gw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (442)
..+|+..+.+.++..++.. +..+.+||+++..+++++ +. .+..++.++++
T Consensus 153 --------~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~--~~-------------------~~~~~~~~~~~ 203 (392)
T PRK10473 153 --------KFPWQSLFYTMAAMGILVLLLSLFILKETRPARAPAAS--SK-------------------PRENSESLLNR 203 (392)
T ss_pred --------CcChHHHHHHHHHHHHHHHHHHHHHcCCCCCcccCCcc--ch-------------------HHHHHHHHhCH
Confidence 3345554466665555543 345566776433211100 00 01123456777
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHH
Q 013453 283 PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGV 362 (442)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (442)
+++...+...+.......+..+.+.+.. +++|+++.+.+......+++.+++.. ...++.||+++|+....+..
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~g~~~~~~~~~~~~~~~~~i~~~~-~~~~l~~r~g~~~~~~~~~~ 277 (392)
T PRK10473 204 FFLSRLVITTLSVTVILTFVNTSPVLLM-----EQMGFSRGEYAIIMALTAGVSMTVSF-STPFALGIFKPRTLMLTSQV 277 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCHHHHH-----HHcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCHHHHHHHHHH
Confidence 7665544444333333333333343332 33688999999999988999999987 66777888899998888877
Q ss_pred HHHHHHHHHHHH
Q 013453 363 LTIPLLTSYPYI 374 (442)
Q Consensus 363 ~~~~~~~~~~~~ 374 (442)
+..++...+...
T Consensus 278 ~~~~~~~~~~~~ 289 (392)
T PRK10473 278 LFLAAGITLALS 289 (392)
T ss_pred HHHHHHHHHHHH
Confidence 766666555443
No 64
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.97 E-value=2.6e-29 Score=235.23 Aligned_cols=349 Identities=14% Similarity=0.099 Sum_probs=236.4
Q ss_pred HHhHhcchhhchhHHHHHHHhcc--cccchhhhhHHHHHH-----HHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHH
Q 013453 51 LCTALPISSLFPFLYFMIKDFQI--AKREEDIGSYAGYVG-----SSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVV 123 (442)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~-----s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~ 123 (442)
+.+.++...+.+..+.+.+++.. ++.+ .+.+. +...++..+++++.|+++||+|||+++..+.++..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~ 76 (394)
T TIGR00883 3 AVEWFDFYLYGFAAVLVFHTFFPPSGDPL------VALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMG 76 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHhcCCCCChH------HHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHH
Confidence 45667777778888888877654 3333 34433 33445556789999999999999999999999999
Q ss_pred HHHHHHhccchHH--------HHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhc
Q 013453 124 IFNTLFGLSVNFW--------MAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (442)
Q Consensus 124 i~~~~~~~a~~~~--------~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 194 (442)
++.++++++++++ .+++.|+++|++.+...+ ..+++.|++|+++|++..+..+.+..+|.++++.++..+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~ 156 (394)
T TIGR00883 77 IGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLS 156 (394)
T ss_pred HHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998875 488999999999888777 5999999999999999999999999999999999887765
Q ss_pred cccccCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhcccccc
Q 013453 195 QPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATP 274 (442)
Q Consensus 195 ~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (442)
.. .+....- .++||.++.+.++..++........||++++.+++++ +++....
T Consensus 157 ~~-------~~~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~ 209 (394)
T TIGR00883 157 YL-------LGDDALL-EWGWRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQEK-------------------HKKKRGP 209 (394)
T ss_pred Hh-------cCHHHhh-ccchHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHhc-------------------cccccCC
Confidence 31 1111101 4567777777666655555554556665432111100 0011223
Q ss_pred cccccccch--hHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhc
Q 013453 275 KKSLLKNWP--LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG 352 (442)
Q Consensus 275 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (442)
.++.+++++ ++......++..........+.+.|... ++|.+..+.+.......++..++.+ +.+++.||++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~~~~-~~g~l~dr~g 283 (394)
T TIGR00883 210 IRETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQ-----TLGLSANSALLVLMLSLILFFITIP-LSGALSDRIG 283 (394)
T ss_pred HHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hcCCChhHHHHHHHHHHHHHHHHHH-HHHHHHHHhc
Confidence 445555554 5555555555555555566667766642 2578888999988888899999888 6667788889
Q ss_pred hhHHHHHHHHHHHHHH-HHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHH-HHHHHH
Q 013453 353 PIMVARIAGVLTIPLL-TSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIA-MTGMSL 430 (442)
Q Consensus 353 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~-~~~~~~ 430 (442)
||+.......+..+.. ........ ....+. ........+.......+.......|.+|++.|+++.++. +....+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 360 (394)
T TIGR00883 284 RRPVLIIFTVLAALLAVPLLMALLD--SGSFTL-FFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAI 360 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhc--CCchHH-HHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHH
Confidence 8887665444333322 22211111 112222 222223333444456677788999999999999999985 455567
Q ss_pred HHhhhcccCCC
Q 013453 431 FKAAGPAGGGA 441 (442)
Q Consensus 431 g~~~gp~i~G~ 441 (442)
|..++|.+.|+
T Consensus 361 g~~~~p~~~g~ 371 (394)
T TIGR00883 361 FGGFAPYIAAA 371 (394)
T ss_pred HhhHHHHHHHH
Confidence 88899988775
No 65
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.97 E-value=1.6e-28 Score=226.21 Aligned_cols=328 Identities=17% Similarity=0.100 Sum_probs=236.3
Q ss_pred hcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhccch
Q 013453 55 LPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVN 134 (442)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a~~ 134 (442)
.......+.+|.+.+++|.+.++ .+++.+.+.+++.+++++.|+++||+|||+++.++.++..++.+.+ .+++
T Consensus 14 ~~~~~~~~~lp~l~~~~~~s~~~------~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~ 86 (355)
T TIGR00896 14 PALTSVGPLLPQIRSALGMSFSV------AGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPG 86 (355)
T ss_pred CccccCcccHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-Hhcc
Confidence 34466789999999999999999 9999999999999999999999999999999999999888888877 7789
Q ss_pred HHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCcccccccccCC
Q 013453 135 FWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKF 213 (442)
Q Consensus 135 ~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~ 213 (442)
++.+++.|++.|++.+...+ ...++.|++| ++|+++++..+.+.++|..+++.+++.+.+ ..+ .
T Consensus 87 ~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~-------~~~-------~ 151 (355)
T TIGR00896 87 TALLFAGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQ-------HSG-------G 151 (355)
T ss_pred HHHHHHHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHH-------hhh-------h
Confidence 99999999999999888776 4778888886 689999999999999999999999998876 111 1
Q ss_pred cChhHHHHHHHHHHHHHHHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhcccccccccccccchhHHHHHHHHH
Q 013453 214 PYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCV 293 (442)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (442)
.||..+...++..++. ...++||.+++++++++ ......++.+|+|.++...+..++
T Consensus 152 ~w~~~f~~~~~~~~~~--~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~ 208 (355)
T TIGR00896 152 HWQQALAWWALPALLA--LLAWIPQVRRRVAANQT---------------------TTRLTPVRIWRSPLAWQVTVFFGL 208 (355)
T ss_pred hHHHHHHHHHHHHHHH--HHHHhhhhccccCCCCC---------------------CCCCCCchhhcCHhHHHHHHHHHH
Confidence 2454445444433322 22334544322111000 011234567888888877666666
Q ss_pred HHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhh-chhHHHHHHHHHHHHHHHHHH
Q 013453 294 FSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL-GPIMVARIAGVLTIPLLTSYP 372 (442)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 372 (442)
..........+.|.|+.+ .|+++.+.+...+...++.+++++ ..+++.||. ++|+....+..+..++...+.
T Consensus 209 ~~~~~~~~~~~lp~~~~~------~g~~~~~~g~~~~~~~~~~i~~~~-~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~ 281 (355)
T TIGR00896 209 QSGLYYSLIGWLPAILIS------HGASAATAGSLLALMQLAQAASAL-LIPALARRVKDQRGIVAVLAVLQLVGLCGLL 281 (355)
T ss_pred HHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHHHHHHHHHHHHH-hHHHHHhhhccchHHHHHHHHHHHHHHHHHH
Confidence 666666666777777642 488999999999999999999998 555666776 566666666666666555444
Q ss_pred HHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhc-ccCChhhhhHHHHHHHHHHHHHHhhhcccCCC
Q 013453 373 YIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQN-RAVDQDQRGAANGIAMTGMSLFKAAGPAGGGA 441 (442)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~g~~~~~~~~g~~~gp~i~G~ 441 (442)
+.... ..+.. ..+.+.+.....+....... +..+++++++..++.+...+++.+++|.+.|+
T Consensus 282 ~~~~~---~~~~~----~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~ 344 (355)
T TIGR00896 282 FAPMH---GLWAW----ALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGV 344 (355)
T ss_pred Hhhhh---HHHHH----HHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 43211 11111 12223333344455444444 43456778999999999999999999988875
No 66
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.97 E-value=1.8e-28 Score=225.88 Aligned_cols=319 Identities=24% Similarity=0.364 Sum_probs=261.0
Q ss_pred HHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHH
Q 013453 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (442)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i 124 (442)
.+....+...++.....+..|.+.+++|.+..+ .+++.+...++..+++++.|+++||+|||+.+..+.++..+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~ 76 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAEDLGLSASQ------AGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFAL 76 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHH
Confidence 345667778888888899999999999999998 99999999999999999999999999999999999999999
Q ss_pred HHHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCc
Q 013453 125 FNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNL 203 (442)
Q Consensus 125 ~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~ 203 (442)
+.+...++++++.+++.|++.|++.+...+ ..+++.|++|+|+|++.+++.+....+|..++|.+++.+.+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-------- 148 (352)
T cd06174 77 GSLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAE-------- 148 (352)
T ss_pred HHHHHHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHH--------
Confidence 999999999999999999999999888878 59999999999999999999999999999999999999988
Q ss_pred ccccccccCCcChhHHHHHHHHHHHHHHHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhcccccccccccccch
Q 013453 204 FSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWP 283 (442)
Q Consensus 204 ~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (442)
..+|+..+.+.++..++..+...+++ |.
T Consensus 149 --------~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------------~~ 176 (352)
T cd06174 149 --------SLGWRWLFLILAILGLLLALLLLFLL--------------------------------------------RL 176 (352)
T ss_pred --------HhhHHHHHHHHHHHHHHHHHHHHHHH--------------------------------------------HH
Confidence 33355555666666665554444443 34
Q ss_pred hHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhH-HHHHHHH
Q 013453 284 LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIM-VARIAGV 362 (442)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 362 (442)
++...+..++..........+.+.+..+. ++.+..+.+.......++..++.. ...++.||.++|+ .+..+..
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~ 250 (352)
T cd06174 177 LLLLALAFFLLSFGYYGLLTYLPLYLQEV-----LGLSAAEAGLLLSLFGLGGILGAL-LGGLLSDRLGRRRLLLLIGLL 250 (352)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhHHHHHHHH
Confidence 55566666666666666666777666532 478899999999999999999988 6666777888888 8888877
Q ss_pred HHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhcccCCC
Q 013453 363 LTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGA 441 (442)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i~G~ 441 (442)
+..++......... .........+.+.......+....+..|..|+++|++..|+.+...+++..++|.+.|.
T Consensus 251 ~~~i~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~ 323 (352)
T cd06174 251 LAALGLLLLALAPS------LALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGL 323 (352)
T ss_pred HHHHHHHHHHHhcc------HHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777666655321 22233344444555566678889999999999999999999999999999999988764
No 67
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.97 E-value=3.7e-29 Score=232.06 Aligned_cols=338 Identities=16% Similarity=0.197 Sum_probs=253.5
Q ss_pred HHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhccc--hHHHHHHHHHHHH
Q 013453 69 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSV--NFWMAVLTRFLLG 146 (442)
Q Consensus 69 ~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a~--~~~~l~~~r~l~G 146 (442)
.+++.+.+| .+++.+.++.|+.+++++.|++.||+|.|+++..+.++.++.+++...+. +++.+++.|++||
T Consensus 66 ~~~~ws~~~------k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqG 139 (466)
T KOG2532|consen 66 GEYDWSSTE------KGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQG 139 (466)
T ss_pred ceecCCHHH------HHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhH
Confidence 357777777 99999999999999999999999999999999999999999999998865 5568899999999
Q ss_pred hhcchhhHH-HHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCcccccccccCCcChhHHHHHHHH
Q 013453 147 SLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLF 225 (442)
Q Consensus 147 ~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~ 225 (442)
++.|...|+ ..+.+.|.|++||++..++...+..+|.+++-+++|++.+. .+||+ .++++.+..
T Consensus 140 l~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s------~~GW~---------sifY~~g~~ 204 (466)
T KOG2532|consen 140 LGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCES------SLGWP---------SIFYVFGIV 204 (466)
T ss_pred HHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcc------CCCCc---------hHHHHHHHH
Confidence 999999995 99999999999999999999999999999999999999982 15554 445888888
Q ss_pred HHHHHHHHh-hccccCCCCCCCCccchhhhhhhhhhhhhhhhhhcccccccccccccchhHHHHHHHHHHHHHHhhHHHH
Q 013453 226 AFGVTIAAF-WLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEI 304 (442)
Q Consensus 226 ~~~~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (442)
+++..++++ +..|+|.+++.-.++ +.+.+++...+.+. +++.+.+++++++++.+|...+..++.+.....+..+
T Consensus 205 g~i~~~~w~~~~~d~P~~h~~is~~---El~~I~~~k~~~~~-~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y 280 (466)
T KOG2532|consen 205 GLIWFILWFLFYSDSPSKHPNISEK---ELKYIEKGKSEAHV-KKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTY 280 (466)
T ss_pred HHHHHHHHHHHhcCCcccCCCCCHH---HHHHHHhccccccc-CCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888876654 455666553332211 11222222222111 1115778999999999999999999999999999999
Q ss_pred HHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhch---------hHHHHHHHHHHHHHHHHHHHHH
Q 013453 305 FSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGP---------IMVARIAGVLTIPLLTSYPYIA 375 (442)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~ 375 (442)
.|.|+... +|++..+.|++.++..+...+..+ +.+.+.|+..+ |..-.++....+++++.+.+..
T Consensus 281 ~PtY~~~V-----L~f~v~~~G~~salP~l~~~~~k~-~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~ 354 (466)
T KOG2532|consen 281 LPTYLKEV-----LGFDVRETGFLSALPFLAMAIVKF-VAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTS 354 (466)
T ss_pred hhHHHHHH-----hCCChhhhhHHHHHHHHHHHHHHH-HHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecC
Confidence 99998865 799999999999999999999988 66666666543 3333445555555565555544
Q ss_pred HhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhcccCCCC
Q 013453 376 MLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGAL 442 (442)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i~G~l 442 (442)
..+ .+..+.+..+..+. .+..............|++.+..+|+.+....+.+.++|.+.|.+
T Consensus 355 ~~~---~~~a~~~l~~~~~~--~g~~~~Gf~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~ 416 (466)
T KOG2532|consen 355 DEH---RLLAVILLTIAIGL--SGFNISGFYKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGII 416 (466)
T ss_pred CCc---chHHHHHHHHHHHH--cccchhhhHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeE
Confidence 322 22222222221111 122222222222222568999999999999999999999998864
No 68
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.97 E-value=3.8e-29 Score=219.26 Aligned_cols=356 Identities=14% Similarity=0.106 Sum_probs=273.3
Q ss_pred CCChhhHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhH
Q 013453 37 GLPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII 116 (442)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~ 116 (442)
+..+++++.-++...+..+...+..++.+.+.+++|+|+.| .+++.+...+...+..++.|.+.||+|.|++..
T Consensus 10 ~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q------~~ll~aiPil~GallRl~~g~l~drfGgR~~~~ 83 (417)
T COG2223 10 RIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQ------KGLLVAIPILVGALLRLPYGFLTDRFGGRKWTI 83 (417)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHH------HHHHHHHHHHHhHHHHHHHHhhhcccCchHHHH
Confidence 34456677666677777777788888889999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccch---HHHHHHHHHHHHhhcchhhHHHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhh
Q 013453 117 MGTASVVIFNTLFGLSVN---FWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (442)
Q Consensus 117 ~~~~~~~i~~~~~~~a~~---~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 193 (442)
++.++..+-.+..+++.+ ++++++.+++.|++.+.+.....++++++|||++|.++|+.. ..++|..+...++..+
T Consensus 84 ~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v 162 (417)
T COG2223 84 LSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLV 162 (417)
T ss_pred HHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhcccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHH
Confidence 999999999999998754 459999999999999999988999999999999999999999 9999999999999998
Q ss_pred ccccccCCCcccccccccCCcChhHHHHHHHHHHHH-HHHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhcccc
Q 013453 194 AQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREA 272 (442)
Q Consensus 194 ~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (442)
.. ..|+. .|+....+.....++. +..++...|.|+.+...++.. +
T Consensus 163 ~~-------~~g~~------~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~---------------------~ 208 (417)
T COG2223 163 AV-------AFGFL------AWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQL---------------------P 208 (417)
T ss_pred HH-------HHhhH------HHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccc---------------------h
Confidence 87 34410 1444445555544443 444555666554322211111 0
Q ss_pred cccccccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhc
Q 013453 273 TPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG 352 (442)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (442)
...+.++++++.|.+.+.++..+..+.++..++|.|+.+. ++.+..++|.......+.+.+.+. .+++++||+|
T Consensus 209 ~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~-----fg~~~~~Ag~~a~~f~~~g~l~Rp-~GG~LsDR~G 282 (417)
T COG2223 209 AQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQ-----FGLSPVTAGLIAFLFPLIGALARP-LGGWLSDRIG 282 (417)
T ss_pred hHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCChhhHHHHHHHHHHHHHHHHh-ccchhhhhcc
Confidence 2345678899999999999999999999999999998754 899999999999999999999998 8999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhch-hhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHH
Q 013453 353 PIMVARIAGVLTIPLLTSYPYIAMLSGF-GLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLF 431 (442)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 431 (442)
.+++....+..++++..+..+....... ..........+....+...-....+.++...+| ++.|.+.|+....+.+|
T Consensus 283 g~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~-~~~G~v~G~vga~G~lG 361 (417)
T COG2223 283 GRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFP-KETGAVTGIVGAIGGLG 361 (417)
T ss_pred chhHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHH-hhhhHHHHHHHHhcccc
Confidence 9998888888888887776665422211 111112222222222222233445666666565 57899999999999999
Q ss_pred HhhhcccCC
Q 013453 432 KAAGPAGGG 440 (442)
Q Consensus 432 ~~~gp~i~G 440 (442)
+..-|...|
T Consensus 362 Gf~lp~~~g 370 (417)
T COG2223 362 GFFLPLAFG 370 (417)
T ss_pred ccchhHHHH
Confidence 877666544
No 69
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.97 E-value=2.6e-27 Score=219.99 Aligned_cols=334 Identities=13% Similarity=0.085 Sum_probs=232.5
Q ss_pred HHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCc----hhhHHHHHHHHHH
Q 013453 50 VLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRK----PVIIMGTASVVIF 125 (442)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr----~~~~~~~~~~~i~ 125 (442)
.+...++.+...|.+|.+.+|+|.+..+ .|++.+++.++..++++++|+++||+||| +.+.+...+. .
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~~g~s~~~------iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~ 84 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKGQGYTPET------IGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--A 84 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcCCCHHH------HHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--H
Confidence 4455566788899999999999999999 99999999999999999999999999994 3333222222 2
Q ss_pred HHHHhccchHHHHHHHHHHHHhhcchhhHH-HHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCcc
Q 013453 126 NTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLF 204 (442)
Q Consensus 126 ~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~ 204 (442)
......+++++.+++.|++.|++.+...|. .+++.++ +++|+++.+......++|.++||++++++.+
T Consensus 85 ~~~~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~--------- 153 (382)
T PRK11128 85 VAFWFGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVS--------- 153 (382)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHH---------
Confidence 233444688999999999999988887774 6676665 4568889999999999999999999999998
Q ss_pred cccccccCCcChhHHHHHHHHHHHHHHHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhcccccccccccccchh
Q 013453 205 SSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPL 284 (442)
Q Consensus 205 gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (442)
.++||..++..++..++..+...+.||++++.++++ + .++...++++++|+|++
T Consensus 154 -------~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----------------~~~~~~~~~~i~~~~~~ 207 (382)
T PRK11128 154 -------WFGEQAILWILTAGVASMLLGQLLRPTIMPQGESRQ---Q----------------ESAGWPAWKALLKEPTV 207 (382)
T ss_pred -------HcChhHHHHHHHHHHHHHHHHHHccCCCCCcccccc---c----------------cccccchHHHHHcChhH
Confidence 344555546555444433333344454322111100 0 00112356788999999
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHHHH
Q 013453 285 MSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLT 364 (442)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (442)
+...+..++.........++.+.|.. +.|+++.+.|.+.+...++.++... ..+++.||+++++.+..+....
T Consensus 208 ~~~~~~~~l~~~~~~~~~~~~~~~~~------~~g~s~~~~g~~~~~~~~~~~~~~~-~~g~l~~r~~~~~~l~~~~~~~ 280 (382)
T PRK11128 208 WRFLLCVSLLQGSHAAYYGFSAIYWQ------AAGYSASTIGYLWSLGVVAEVLIFA-FSNRLFRRWSARDLLLLSAICG 280 (382)
T ss_pred HHHHHHHHHHHHHhHhHHHHHHHHHH------HCCCCHhHHHHHHHHHHHHHHHHHH-HHHHHHHHCCHHHHHHHHHHHH
Confidence 88877777766666666667776653 2588899999999888888887777 6666778889999888887777
Q ss_pred HHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHH-HHHHHhhhcccCCCC
Q 013453 365 IPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTG-MSLFKAAGPAGGGAL 442 (442)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~-~~~g~~~gp~i~G~l 442 (442)
.+....+.... ..+. ..+..++.+.......+....+..+. +++++++..++.+.. ...|..+||.++|.+
T Consensus 281 ~~~~~~~~~~~-----~~~~-~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l 352 (382)
T PRK11128 281 VVRWGLMGSTT-----ALPW-LIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFL 352 (382)
T ss_pred HHHHHHHHhhh-----hHHH-HHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76655544322 2222 22233333333333455566666664 667789999988744 567778999888753
No 70
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.96 E-value=4.3e-27 Score=224.27 Aligned_cols=353 Identities=13% Similarity=0.134 Sum_probs=242.0
Q ss_pred hhhHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhccc-----CCchh
Q 013453 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-----GRKPV 114 (442)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~-----Grr~~ 114 (442)
+|+...++...+..++......+.+|.+.++.|.+..+ +|.+ +.....+ ++.+++|+++||+ ||||.
T Consensus 11 ~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~------ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~ 82 (491)
T PRK11010 11 QPNSAILLILGFASGLPLALTSGTLQAWMTVENIDLKT------IGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRG 82 (491)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHH------HHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchH
Confidence 45566777778888888888999999999999999888 8886 4444444 6899999999999 99986
Q ss_pred -hHHHHHHHHHHHHHHhcc---chHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHh
Q 013453 115 -IIMGTASVVIFNTLFGLS---VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPAL 189 (442)
Q Consensus 115 -~~~~~~~~~i~~~~~~~a---~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 189 (442)
++.+.++.+++...+++. ++++.+.+.+++.|++.+...+ ..+++.|++|+|+|+++.++...+..+|.++++.+
T Consensus 83 ~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l 162 (491)
T PRK11010 83 WLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGL 162 (491)
T ss_pred HHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 567777777777777664 4788899999999998888777 58999999999999999999999999999999999
Q ss_pred hhhhccccccCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhc
Q 013453 190 GGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEG 269 (442)
Q Consensus 190 ~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (442)
++++.+ . .++||..+.+.+++.++..+..+++||+++..++ ++ +.. +
T Consensus 163 ~~~l~~-------~--------~~GWr~~f~i~a~l~ll~~l~~~~~~e~~~~~~~-~~--~~~---------------~ 209 (491)
T PRK11010 163 ALWLAD-------R--------YLGWQGMYWLMAALLIPCIIATLLAPEPTDTIPV-PK--TLE---------------Q 209 (491)
T ss_pred HHHHHh-------c--------ccCHHHHHHHHHHHHHHHHHHHHhcCCCcccccc-cc--chh---------------h
Confidence 999886 1 1356666677777766666555567876432111 00 000 0
Q ss_pred ccccccccccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHH-HHHHHHHHHHhhHHHHHH
Q 013453 270 REATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLA-ITGFSLLVFQLSLYPFLE 348 (442)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 348 (442)
+...+.++.++++..+...+..+++.........+.+.|+. +..|++..+.+.... ...++.+++.+ +.+++.
T Consensus 210 ~~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~-----~~~G~s~~~~g~~~~~~g~i~~iiG~l-l~G~L~ 283 (491)
T PRK11010 210 AVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLI-----RGVGFDAGEVGLVNKTLGLLATIVGAL-YGGILM 283 (491)
T ss_pred hHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HhcCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 00113445666777666555555555444444455555543 236899999999875 44567777777 778888
Q ss_pred HhhchhHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHH
Q 013453 349 RILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGM 428 (442)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 428 (442)
||+++++.+..+..+..+....+...... ....+. +....++.........+...+...+..+++.+++..|+.+...
T Consensus 284 dr~g~~~~l~i~~~l~~l~~l~~~~l~~~-~~~~~~-l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~ 361 (491)
T PRK11010 284 QRLSLFRALMIFGILQGVSNAGYWLLSIT-DKNLYS-MGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALS 361 (491)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHhc-cccHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHH
Confidence 88888877666555444433322221111 111221 1111111111122223445677777788888999999999999
Q ss_pred HHHHhhhcccCCC
Q 013453 429 SLFKAAGPAGGGA 441 (442)
Q Consensus 429 ~~g~~~gp~i~G~ 441 (442)
.+|..+++.+.|+
T Consensus 362 ~lg~~~~~~~~G~ 374 (491)
T PRK11010 362 AVGRVYVGPVAGW 374 (491)
T ss_pred HHHHHHHHHHHHH
Confidence 9999888777764
No 71
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.96 E-value=7.7e-27 Score=215.16 Aligned_cols=331 Identities=11% Similarity=0.150 Sum_probs=232.5
Q ss_pred chhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhccc-----CCchhh-HHHHHHHHHHHHHHh
Q 013453 57 ISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-----GRKPVI-IMGTASVVIFNTLFG 130 (442)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~-----Grr~~~-~~~~~~~~i~~~~~~ 130 (442)
.....+.+|.+.+|+|+|.++ .|++... .+...+ .+++|+++||+ ||||.+ +.+.++.++.....+
T Consensus 4 ~~~~~~~~~~~~~~~g~s~~~------~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~ 75 (356)
T TIGR00901 4 LGLVGNTLPYWLRSKNVSLKT------IGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILS 75 (356)
T ss_pred chhHHhHHHHHHHHcCCCHHH------HHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHH
Confidence 455678899999999999999 9999755 555555 99999999998 899974 567777777777777
Q ss_pred cc---chHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCcccc
Q 013453 131 LS---VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSS 206 (442)
Q Consensus 131 ~a---~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw 206 (442)
+. .+.+.+....++.+++.+...+ ..+++.|++|+|+|+++.++...+..+|.++++.+++.+.+ ..|.
T Consensus 76 ~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~-------~~g~ 148 (356)
T TIGR00901 76 FLVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLAS-------PEFA 148 (356)
T ss_pred cCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhh-------hccc
Confidence 76 4666677777888888777777 59999999999999999999999999999999999999887 3332
Q ss_pred cccccCCcChhHHHHHHHHHHHHHHHHh-hccccCCCCCCCCccchhhhhhhhhhhhhhhhhhcccccccccccccch--
Q 013453 207 ESLFGKFPYFLPCLCISLFAFGVTIAAF-WLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWP-- 283 (442)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 283 (442)
... .+++||.++.+.++..++..+..+ ..||+++..+. ++ +.. ++.....++++++|.
T Consensus 149 ~~~-~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~~~~~~-~~--~~~---------------~~~~~~~~~~~~~~~~~ 209 (356)
T TIGR00901 149 NTG-LITLWGYIFFWTALLILPGLLVTLFLAKEPQEDASV-PK--PLT---------------QAVLKPIREFFQRKNMI 209 (356)
T ss_pred ccc-cccccHHHHHHHHHHHHHHHHHHHHhccCCCccccc-ch--hHH---------------HHHHHHHHHHHHhcCch
Confidence 222 256688888888877766655444 35664321111 00 000 000113345666665
Q ss_pred -hHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHH-HHHHHHhhHHHHHHHhhchhHHHHHHH
Q 013453 284 -LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGF-SLLVFQLSLYPFLERILGPIMVARIAG 361 (442)
Q Consensus 284 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (442)
++...+..++..........+.+.|... .|+++.+.+.+....+. ..+++.+ +++++.||+++|+.+..+.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~g~~~~~~g~~~~~~~~~~~~~g~~-~~g~l~~r~g~~~~l~~~~ 282 (356)
T TIGR00901 210 QALLLLLLIVLYKLGDSAATVLTTLFLLD------MGFSKEEIALVAKINGLLGAILGGL-IGGIIMQPLNILYALLLFG 282 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHhHHHHHHHHHHHHH-HHHHHHhhhhHHHHHHHHH
Confidence 5655555566666666666777776642 58899999988877664 5566665 7778888889988887777
Q ss_pred HHHHHHHHHHHHHHHhhc------hhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHH
Q 013453 362 VLTIPLLTSYPYIAMLSG------FGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMS 429 (442)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 429 (442)
++..+...++.+...... ...+ ......++.++......+...++..|..|+++||+..|+.++..+
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 283 IVQALTNAGFVWLASNGHHDGITFPHLL-MLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHHHHHHhcCcccccccchHH-HHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 776666554444321110 1122 233333344455566778889999999999999999999887764
No 72
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.96 E-value=2.3e-26 Score=214.48 Aligned_cols=339 Identities=14% Similarity=0.166 Sum_probs=216.4
Q ss_pred HHHHHHHHHHhHhcchhhchhHHHH-HHHhcccccchhhhhHHHHHHHHHHH-HHHhhhhhhhhhhcccCCchhh-HHHH
Q 013453 43 LFSIWIIVLCTALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMF-GRALTSVFWGLVADRYGRKPVI-IMGT 119 (442)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~s~~~~-~~~~~~~~~G~l~dr~Grr~~~-~~~~ 119 (442)
....++..++..+......|.+|.+ .+++|.+.++ .|++.+...+ +..++.++.|+ +||+||||.+ ..+.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~------~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~ 89 (393)
T PRK15011 17 STAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAM------VGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCC 89 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHH
Confidence 4456667888888888888988765 6789999999 9999876655 55566655555 9999999875 4556
Q ss_pred HHHHHHHHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchh--hhhhhhhHhhhhHHHHHHHhhhhhccc
Q 013453 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQA--LGLSTVSTAWGIGLIIGPALGGFLAQP 196 (442)
Q Consensus 120 ~~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~--~~~~~~~~~~~~g~~~g~~~~~~l~~~ 196 (442)
+...++..+.+++++++.+++.+.+.|...+...| ..+++.|+.++++|. ...+..+.+.++|.++||++++.+.+
T Consensus 90 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~- 168 (393)
T PRK15011 90 LLGVLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAM- 168 (393)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHH-
Confidence 66677888888999999887666555544445566 478888887766553 34578889999999999999999998
Q ss_pred cccCCCcccccccccCCcChhHHHHHHHHHHHHH-HHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhccccccc
Q 013453 197 AEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPK 275 (442)
Q Consensus 197 ~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (442)
..+||..+...++..++.. ...+++||.++.++++++ +. ...
T Consensus 169 ---------------~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~~ 211 (393)
T PRK15011 169 ---------------GFSFTVMYLSAAVAFIVCGVMVWLFLPSMRKELPLATG---TL-------------------EAP 211 (393)
T ss_pred ---------------hcChHHHHHHHHHHHHHHHHHHHhhcCccCCCCccccc---cc-------------------ccc
Confidence 3445555577766665554 345567776433211100 00 000
Q ss_pred ccccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhH
Q 013453 276 KSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIM 355 (442)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (442)
++ +.+..+...............+..+.|.|+.+ ++++++.+.+.+.....++.+++.+ +.+++.||+++|+
T Consensus 212 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~-----~~~~~~~~~g~~~~~~~~~~i~~~~-~~G~l~dr~g~~~ 283 (393)
T PRK15011 212 RR--NRRDTLLLFVICTLMWGTNSLYIINMPLFIIN-----ELHLPEKLAGVMMGTAAGLEIPTML-IAGYFAKRLGKRF 283 (393)
T ss_pred cc--ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhChHH
Confidence 00 11222333333333333344444556665543 3688888999888777777777777 6677778889888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhh
Q 013453 356 VARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAG 435 (442)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g 435 (442)
....+.....+.+...... ++ .+... ......+.......+.......|..| ++++++.++.+...++|..++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~---~~--~~~~l-~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~~~~~~~~~~~lg~~~g 356 (393)
T PRK15011 284 LMRVAAVAGVCFYAGMLMA---HS--PAILL-GLQLLNAIYIGILGGIGMLYFQDLMP-GQAGSATTLYTNTSRVGWIIA 356 (393)
T ss_pred HHHHHHHHHHHHHHHHHHH---hh--HHHHH-HHHHHHHHHHHHHHHHHHHHHHHhCC-CCcchHHHHHHHHHHHHHHHH
Confidence 7766655444433322221 11 11111 11111111111222334455677777 469999999999999999999
Q ss_pred cccCCC
Q 013453 436 PAGGGA 441 (442)
Q Consensus 436 p~i~G~ 441 (442)
|.++|.
T Consensus 357 ~~l~G~ 362 (393)
T PRK15011 357 GSLAGI 362 (393)
T ss_pred HHHHHH
Confidence 988875
No 73
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.96 E-value=3e-27 Score=223.28 Aligned_cols=353 Identities=20% Similarity=0.187 Sum_probs=264.7
Q ss_pred CChhhHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHH
Q 013453 38 LPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (442)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~ 117 (442)
.+.+.+..+|.+.+++.++..+....++.+..++.-|+.. .+++..+..+...+.++++|.++||++|||+++.
T Consensus 7 lr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~------valv~~a~~LP~~Llsl~aG~laDr~drrrili~ 80 (524)
T PF05977_consen 7 LRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLM------VALVQAASTLPILLLSLFAGALADRFDRRRILIL 80 (524)
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHH
Confidence 3446677888999999999999999999998888888887 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhc-----cchHHHHHHHHHHHHhhcchhhHH-HHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhh
Q 013453 118 GTASVVIFNTLFGL-----SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGG 191 (442)
Q Consensus 118 ~~~~~~i~~~~~~~-----a~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 191 (442)
+.++..+..+..++ ..+.+.+++.-++.|++.+...|+ ++++.|..|+++...+.++.+...++..++||.++|
T Consensus 81 ~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG 160 (524)
T PF05977_consen 81 SQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGG 160 (524)
T ss_pred HHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHH
Confidence 98877666554443 247899999999999999999996 999999999999999999999999999999999999
Q ss_pred hhccccccCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhccc
Q 013453 192 FLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGRE 271 (442)
Q Consensus 192 ~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (442)
.+.. ..+....+.+.++..++.+..+...+.+++..+.++ +.. .+.-
T Consensus 161 ~Lva----------------~~G~~~~f~inalsfl~~i~~l~~~~~~~~~~~~~~---e~~--------------~~~l 207 (524)
T PF05977_consen 161 ILVA----------------FFGAAAAFLINALSFLISILALLRWKPPPPPSSLPR---ERF--------------FSAL 207 (524)
T ss_pred HHHH----------------HHHHHHHHHHHHHHHHHHHHHHHHccccccccccch---hhh--------------hhhH
Confidence 9987 333344446666555554444444443222111111 111 0011
Q ss_pred ccccccccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhh
Q 013453 272 ATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL 351 (442)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (442)
+...+.+.++|.+...++..+++++....+...+|.+.. +.+|.++...|++.+..+++.+++++ ...++.++.
T Consensus 208 ~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~-----~~l~~~a~~yGll~a~~gvGai~Gal-~~~~l~~~~ 281 (524)
T PF05977_consen 208 REGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFAR-----DVLGGGASGYGLLLAAFGVGAILGAL-LLPRLRRRL 281 (524)
T ss_pred HHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHH-----HHhCCcHHHHHHHHHHHHHHHHHHHH-HHHHhhccc
Confidence 223445556777766666666666555555566666554 33688999999999999999999999 666677887
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHH
Q 013453 352 GPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLF 431 (442)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 431 (442)
++++++..+.+..+++++.+.+.. ..+. ..+..++.++..........+...+..|++.||++++++++....+
T Consensus 282 ~~~~lv~~~~~~~a~~~~~lal~~-----~~~~-~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~ 355 (524)
T PF05977_consen 282 SSRRLVLLASLLFALALLLLALSP-----SFWL-ALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGG 355 (524)
T ss_pred CcchhhHHHHHHHHHHHHHHhcch-----HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHH
Confidence 888888777777776666655532 2232 2233334445555566667788889999999999999999999999
Q ss_pred HhhhcccCCC
Q 013453 432 KAAGPAGGGA 441 (442)
Q Consensus 432 ~~~gp~i~G~ 441 (442)
..+|..+.|.
T Consensus 356 ~~lGsll~G~ 365 (524)
T PF05977_consen 356 MPLGSLLWGF 365 (524)
T ss_pred HHHHHHHHHH
Confidence 9999888775
No 74
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=8.2e-29 Score=213.94 Aligned_cols=354 Identities=19% Similarity=0.179 Sum_probs=257.5
Q ss_pred HHHHHHHHHHhHhcchhhchhHHHHHHHhcc--------------------------------------------cccch
Q 013453 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQI--------------------------------------------AKREE 78 (442)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------------~~~~~ 78 (442)
+..+..+.+.+.+....+.|.+|.+..|.+. ....+
T Consensus 23 lviv~ialllDnmL~~vivPiiP~~L~d~~~~p~~~~~~~~is~~~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~~~ 102 (464)
T KOG3764|consen 23 LVIVSIALLLDNMLYTVIVPIIPGYLYDIQAEPTIIQPFFPISTAPIPPGSMSSFSSLNISTESTNASAGKSPAEAISLD 102 (464)
T ss_pred EEEEehhhhccCccceeeeccCccHHHHhccCCccCccccccccCCCCCccccceecccCCccccccccccCchhccCcc
Confidence 3356667777777777888888877766652 00001
Q ss_pred hhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhcchhhHH-HH
Q 013453 79 DIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KA 157 (442)
Q Consensus 79 ~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~-~~ 157 (442)
.....+|++.+.+.+.+.+..++.|.+.||+|+|..+++|++.+...++++++.+++++++++|.+||+|.+...++ .+
T Consensus 103 ~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsgla 182 (464)
T KOG3764|consen 103 RENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLA 182 (464)
T ss_pred ccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHH
Confidence 11223999999999999999999999999999999999999999999999999999999999999999999999886 99
Q ss_pred Hhhhhcccc-chhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhc
Q 013453 158 YACEIFREE-HQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWL 236 (442)
Q Consensus 158 ~i~~~~~~~-~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (442)
+++|.+|++ +|++++|+...+.++|..+||++||.+++ ..+++.+|.+.+++.++...+.+++
T Consensus 183 mlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe----------------~~Gk~aPFlVL~~v~Lld~~L~l~v 246 (464)
T KOG3764|consen 183 MLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYE----------------FAGKSAPFLVLAIVLLLDGALQLLV 246 (464)
T ss_pred HHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHh----------------hcCCcCcHHHHHHHHHHHHHHHHhe
Confidence 999999976 57999999999999999999999999999 6667888899999888877766665
Q ss_pred cccCCCCCCCCccchhhhhhhhhhhhhhhhhhcccccccccccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccC
Q 013453 237 PETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLG 316 (442)
Q Consensus 237 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (442)
-|+.+.+++.. ++....++++++|.++.........+.........+++|....
T Consensus 247 i~p~~~~~~~~----------------------~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~---- 300 (464)
T KOG3764|consen 247 IEPTEMDPDST----------------------EQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLET---- 300 (464)
T ss_pred eCccccCcccc----------------------ccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHh----
Confidence 55433222111 1234567899999988766666555555555556666665533
Q ss_pred cccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhc--hhHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHH
Q 013453 317 GLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG--PIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKN 394 (442)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (442)
+..+.-+.|..+....+...++.. +.+.+.+|++ |......+.+..++.+....+..... ..|+......+..+
T Consensus 301 -m~~p~w~~G~~fLp~~~~y~ig~~-lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~--~L~vp~~~l~~~i~ 376 (464)
T KOG3764|consen 301 -MFTPGWEVGLAFLPASLSYAIGTN-LFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIA--QLWVPNFGLGFGIG 376 (464)
T ss_pred -ccCCCcceeeeecccccchhccCc-hHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHH--HHhhhhHHHHHHHH
Confidence 443344788888888899999988 5555666666 43344445555555555555544332 23333444444344
Q ss_pred HHHHHHHHhhhhhhcccCC--hhhhhHHHHHHHHHHHHHHhhhcccCCCC
Q 013453 395 LLSVSIITGLFILQNRAVD--QDQRGAANGIAMTGMSLFKAAGPAGGGAL 442 (442)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~~g~~~gp~i~G~l 442 (442)
.......|....++..... -+.-|.+.++......+|.++||.++|.+
T Consensus 377 ~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~i 426 (464)
T KOG3764|consen 377 LADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSL 426 (464)
T ss_pred HHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchh
Confidence 4444455554444433221 12668999999999999999999999864
No 75
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.96 E-value=7.5e-27 Score=224.41 Aligned_cols=359 Identities=13% Similarity=0.094 Sum_probs=243.0
Q ss_pred chhhchhHHHHHHHhcccccchhhh-hHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhccchH
Q 013453 57 ISSLFPFLYFMIKDFQIAKREEDIG-SYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNF 135 (442)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a~~~ 135 (442)
.+...+....+.++...+..+.... ...+|+.+...++..+++++.|+++|++|||+.++++.+++.++.+++++++|+
T Consensus 63 ~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~ 142 (513)
T KOG0254|consen 63 IGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSW 142 (513)
T ss_pred cccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 3455566666665433222221110 125899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCcccccccccCCc
Q 013453 136 WMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFP 214 (442)
Q Consensus 136 ~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~ 214 (442)
++++++|+++|+|.|.... ++.+++|..|++.||...+..+....+|..++..++....+ . .++
T Consensus 143 ~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~-------~--------~~~ 207 (513)
T KOG0254|consen 143 YQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSK-------V--------YAG 207 (513)
T ss_pred HHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhcc-------C--------Ccc
Confidence 9999999999999888777 69999999999999999999999999999999555544433 0 135
Q ss_pred ChhHHHHHHHHHHHHHHHHhhccccCCCCCCCCccchh--hhhhhhh--hhhhhh-----------hhh-cccccccccc
Q 013453 215 YFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDV--SYDALES--ASAEVK-----------EEE-GREATPKKSL 278 (442)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~--~~~~~~~--~~~~~~-----------~~~-~~~~~~~~~~ 278 (442)
||.++.+..+.+++..+..+++||+|++..++.+..+. ....+.. ..+... +.. .+....+.++
T Consensus 208 Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 287 (513)
T KOG0254|consen 208 WRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGEL 287 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHh
Confidence 77777888888888877788999999885443322221 1112211 000000 000 0111123444
Q ss_pred cccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHH
Q 013453 279 LKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVAR 358 (442)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (442)
++........+...+..+.+.........|. +...+..|.+... .......++..+++.. +..++.||.|||+.+.
T Consensus 288 ~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~--~~if~~~g~~~~~-~~~~~~~~~v~~~~t~-~~~~lvd~~gRr~lll 363 (513)
T KOG0254|consen 288 FSPKVRKRLIIGLLLQLFQQLTGINYVFYYS--TTIFKSAGLKSDT-FLASIILGVVNFLGTL-VATYLVDRFGRRKLLL 363 (513)
T ss_pred cCcchHHHHHHHHHHHHHHHHhCCceEEeeh--HHHHHhcCCCCch-HHHHHHHHHHHHHHHH-HHHHHHHHhccHHHHH
Confidence 4422333344444444444443322222222 2223334554332 3334444566666665 4566777779999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhc-------hhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHH
Q 013453 359 IAGVLTIPLLTSYPYIAMLSG-------FGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLF 431 (442)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 431 (442)
.+.....++.+++........ ...+..+....++...+..+..+..+.+.+|.+|.+.|+++.++........
T Consensus 364 ~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~ 443 (513)
T KOG0254|consen 364 FGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLW 443 (513)
T ss_pred HhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHH
Confidence 998888888777665443321 2345555566666667777888889999999999999999999999988876
Q ss_pred Hhh
Q 013453 432 KAA 434 (442)
Q Consensus 432 ~~~ 434 (442)
..+
T Consensus 444 ~~~ 446 (513)
T KOG0254|consen 444 NFL 446 (513)
T ss_pred HHH
Confidence 654
No 76
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.96 E-value=4.7e-27 Score=248.61 Aligned_cols=363 Identities=17% Similarity=0.077 Sum_probs=244.8
Q ss_pred hhHHHHHHHHHHhHhcch-hhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHH
Q 013453 41 TELFSIWIIVLCTALPIS-SLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (442)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~ 119 (442)
+.+...+++.++..+... ......+.+.++++.+... ...+++.+++.+++.++++++|+++||+|||++++++.
T Consensus 9 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~ 84 (1146)
T PRK08633 9 IGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQV----ILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVK 84 (1146)
T ss_pred hhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHH----HHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHH
Confidence 344445555555544433 3344445666667654332 22799999999999999999999999999999999988
Q ss_pred HHHHHHHHHHh---ccchHHHHHHHHHHHHhhcchhhHH-HHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhcc
Q 013453 120 ASVVIFNTLFG---LSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 120 ~~~~i~~~~~~---~a~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (442)
++..+..++.. .+++++.+++.|+++|++.+...++ .+++.|++|+++|++++++.+.+..+|.++|+.+++++.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~ 164 (1146)
T PRK08633 85 LFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFE 164 (1146)
T ss_pred HHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 77666555443 4578999999999999999998885 9999999999999999999999999999999999999986
Q ss_pred ccccCCCccccc--ccccCCcChhHHHHHHHHHHHHHHHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhccccc
Q 013453 196 PAEKYPNLFSSE--SLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREAT 273 (442)
Q Consensus 196 ~~~~~~~~~gw~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (442)
. .++. ..+ .+.++..+++.....++.++..+.+||.++....+.+..+.. . ......
T Consensus 165 ~-------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-----------~~~~~~ 223 (1146)
T PRK08633 165 S-------VNGNTPSEI-LGRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAPEVFDKKKYL--F-----------PKLLWR 223 (1146)
T ss_pred h-------hcccccccc-ccchHHHHHHHHHHHHHHHHHHhcCcCCCCCCcccccccccc--c-----------HHHHHH
Confidence 2 1100 000 111222222333333334445556777664432211000000 0 000112
Q ss_pred ccccccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChh-HHHHHHHHHHHHHHHHHhhHHHHHHHhhc
Q 013453 274 PKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQ-MVGEVLAITGFSLLVFQLSLYPFLERILG 352 (442)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (442)
.++.+++++.++...+..++..........+++.|+.. .+|++.. +.+++.+..+++.+++.+ +.+++.||.+
T Consensus 224 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~g~s~~~~~g~~~~~~~ig~~~g~~-~~g~l~~r~~ 297 (1146)
T PRK08633 224 NLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKE-----VLGLDNTFQVQYLLAASAIGIGIGSL-LAGRLSGRHI 297 (1146)
T ss_pred HHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHH-----HhCCCcHHHHHHHHHHHHHHHHHHHH-HHHHHhCCce
Confidence 34567788888877776666666555566666666543 3688888 899999999999999988 6677777778
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHH
Q 013453 353 PIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFK 432 (442)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 432 (442)
+++.+.++.++.+++.+++.+.. ..+. ..+..++.+++.....+...+++.+..|++.||+++|+.+++.++|.
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~ 371 (1146)
T PRK08633 298 ELGLVPLGALGLALSLFLLPTAP-----SLAS-VLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGM 371 (1146)
T ss_pred EccchhHHHHHHHHHHHHHHHhh-----hHHH-HHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHH
Confidence 77777666666665555544432 1222 22333333444444556677888888999999999999999999988
Q ss_pred hhhcccCC
Q 013453 433 AAGPAGGG 440 (442)
Q Consensus 433 ~~gp~i~G 440 (442)
++++.+++
T Consensus 372 ~~~~~~~~ 379 (1146)
T PRK08633 372 LLFLALTT 379 (1146)
T ss_pred HHHHHHHH
Confidence 77765543
No 77
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.96 E-value=4e-27 Score=218.83 Aligned_cols=345 Identities=15% Similarity=0.096 Sum_probs=245.1
Q ss_pred HHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhccchHHHHHHHHH
Q 013453 64 LYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRF 143 (442)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~r~ 143 (442)
+-.+.+|.+....+ .+.+.+++.++++++++++|.+.||++..+.+....+++++..++.+...|++.+++.|+
T Consensus 69 l~g~~edl~~~~~~------l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~ 142 (495)
T KOG2533|consen 69 LSGLKEDLKLVGNQ------LGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRF 142 (495)
T ss_pred HcCCccccchhhhh------hhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 33455888888888 999999999999999999999999999999999999999999988888999999999999
Q ss_pred HHHhhcchhhHH-HHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCcccccccccCCcChhHHHHH
Q 013453 144 LLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCI 222 (442)
Q Consensus 144 l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~ 222 (442)
+.|+.++..+|+ ..+++.|+.++||++.++++.+..++|.++|++++..+.+ ..+.....|||+.| ++.
T Consensus 143 llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~-~~~~~~~~gW~~~F---------iI~ 212 (495)
T KOG2533|consen 143 LLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFK-LNGSGGLAGWRWLF---------IIE 212 (495)
T ss_pred HHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhh-hcCCCCcCCceeeh---------hHH
Confidence 999999999995 9999999999999999999999999999999999999765 22222355665555 888
Q ss_pred HHHHHHH-HHHHhhccccCCCCCCCCccchhh-hhhhhhhhhhhhhhhcccccccccccccchhHHHHHHHHHHHHHHhh
Q 013453 223 SLFAFGV-TIAAFWLPETLHRHNDDDDSCDVS-YDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMA 300 (442)
Q Consensus 223 ~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (442)
+++.++. ++..+++|+.|.+.+-.+++++.. .++.++...+..+++ .+....++.+++|.+|...+..++......+
T Consensus 213 G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~ 291 (495)
T KOG2533|consen 213 GVITLVLGIVVFFFLPDNPSKAWFLTDEEKELVVERLRESPSGGIENK-FKWKGFKEALKDPGVWPFSLCYFFLKLVNYG 291 (495)
T ss_pred HHHHHHHHheEEEEecCChhhccccchHHHHHHHHHHHhccCCCcccc-cCHHHHHHHHhchhHHHHHHHHHHHhhcccc
Confidence 8777766 456778999887543222222111 112221111111111 4556778899999999999999999999999
Q ss_pred HHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHh----hchhHHHHHHHHHHHHHH-HHHHHHH
Q 013453 301 YSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI----LGPIMVARIAGVLTIPLL-TSYPYIA 375 (442)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~ 375 (442)
+..+.|+++.. +.|++..+++.+..+..++++++.+ +.+++.|| ..++........+..... ..+....
T Consensus 292 ~~~~lpl~l~~-----~~~~s~~~a~~ls~~~~~~g~v~~i-~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~ 365 (495)
T KOG2533|consen 292 FSYWLPLYLKS-----NGGYSELQANLLSTPYDVGGIVGLI-LAGYLSDRLKTIFARRLLFIVFLCLYAIIGAISLLAAA 365 (495)
T ss_pred HHHHHHHHHHc-----CCCcChHHhccccchHHhhhHHHHH-HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999875 3578999999999999999999988 77777777 344444433333222222 2222221
Q ss_pred HhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChh-hhhHHHHHHHHHHHHHHhhhcc
Q 013453 376 MLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQD-QRGAANGIAMTGMSLFKAAGPA 437 (442)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~~g~~~gp~ 437 (442)
. ... .....+..........+......++....+ ++-+..+......+.+++++|.
T Consensus 366 ~----~~~--~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~ 422 (495)
T KOG2533|consen 366 V----LPG--AYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQ 422 (495)
T ss_pred c----chH--HhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhh
Confidence 0 111 111122222223334455556666655444 4444555555555555555554
No 78
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.96 E-value=3.8e-26 Score=213.73 Aligned_cols=348 Identities=12% Similarity=0.024 Sum_probs=231.8
Q ss_pred HHHHHHHHhHhcchhhchhHH-HHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCC-chhhHHHHHHH
Q 013453 45 SIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGR-KPVIIMGTASV 122 (442)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Gr-r~~~~~~~~~~ 122 (442)
.+....+..+.......|.++ .+.+++|.+..+ .|++.+++.++..++++++|+++||+|| |+++.++.++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~------iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~ 79 (418)
T TIGR00889 6 KLKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAE------IGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAG 79 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 355666777777777766665 555779999999 9999999999999999999999999965 77888888888
Q ss_pred HHHHHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhh--------hhccccchhhhhhhhhHhhhhHHHHHHHhhhhh
Q 013453 123 VIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYAC--------EIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (442)
Q Consensus 123 ~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~--------~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 193 (442)
.+...+..+.++++.+++.|++.|++.+...+ ..++.. |......|.+..| .+|.++||.+++.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l 153 (418)
T TIGR00889 80 ALLLFFAAQVTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLL 153 (418)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHh
Confidence 88888888999999999999999998666655 344322 2233334555544 47888999988877
Q ss_pred ccccccCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhccccc
Q 013453 194 AQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREAT 273 (442)
Q Consensus 194 ~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (442)
.. ...| .++++.++..++..+..+++||+++.+++++. + . ++..+.
T Consensus 154 ~~----------------~~~~-~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~--~-~--------------~~~~~~ 199 (418)
T TIGR00889 154 DI----------------ELSN-IQLYITAGSSALLGVFALTLPDIPVAKSTAKM--S-I--------------KVMLGL 199 (418)
T ss_pred cc----------------cchh-HHHHHHHHHHHHHHHHHhcCCCCCCCcccccc--C-H--------------HHHhhh
Confidence 42 2122 23445555555555555677886532211110 0 0 000111
Q ss_pred ccccccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCc--ccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhh
Q 013453 274 PKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGG--LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL 351 (442)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (442)
..++++|+|+++...+..++..........+.+.+..+.-.... -+++....+...+...+..+++.+ ..+++.||+
T Consensus 200 ~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~-~~g~l~dr~ 278 (418)
T TIGR00889 200 DAFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFIL-TIPFFLKRF 278 (418)
T ss_pred hHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHH-HHHHHHHHh
Confidence 23457888888777666666555444444555555432100000 123456778899998889999887 666677888
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHH-HHHHH
Q 013453 352 GPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAM-TGMSL 430 (442)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~-~~~~~ 430 (442)
++|+.+..+.++..+...++..... ........++..++.+.......+....++.|.+|+++|++++|+.+ ....+
T Consensus 279 g~r~~l~~~~~~~~v~~~l~~~~~~--~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~l 356 (418)
T TIGR00889 279 GIKKVMLLSLVAWALRFGFFAYGDP--EYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGF 356 (418)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHcCc--chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhh
Confidence 9999998888877776655544211 11111222233333333333445666788899999999999999997 56789
Q ss_pred HHhhhcccCCC
Q 013453 431 FKAAGPAGGGA 441 (442)
Q Consensus 431 g~~~gp~i~G~ 441 (442)
|.++||.++|+
T Consensus 357 g~~iGp~l~G~ 367 (418)
T TIGR00889 357 GSLLGYILSGV 367 (418)
T ss_pred HHHHHHHHHHH
Confidence 99999999885
No 79
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.96 E-value=1e-26 Score=245.04 Aligned_cols=320 Identities=15% Similarity=0.083 Sum_probs=225.1
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHH---HHHHHHHHHHHHhccchHHHHHHHHHHHHhhcchhhHH-HHHh
Q 013453 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM---GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYA 159 (442)
Q Consensus 84 ~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~---~~~~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~-~~~i 159 (442)
.++..+++.+++.++++++|+++||+|||+++.. ..+...+..+.....+++++++++|+++|++.+...|+ .+++
T Consensus 54 ~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l 133 (1140)
T PRK06814 54 VTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSIL 133 (1140)
T ss_pred HHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhh
Confidence 7888999999999999999999999999998633 22233333333334589999999999999999999885 9999
Q ss_pred hhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhcccc
Q 013453 160 CEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPET 239 (442)
Q Consensus 160 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 239 (442)
.|++|+++|++++++.+++.++|.++||++++++.+ ..+|+..++..++..++.++..+++|++
T Consensus 134 ~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (1140)
T PRK06814 134 PDHLNKDELLGANALVEAGTFIAILLGTIIGGLATI----------------SGNFVILVALLMGIAVLGWLASLFIPKT 197 (1140)
T ss_pred HhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHh----------------ccccHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 999999999999999999999999999999999998 3345555455555555555566667766
Q ss_pred CCCCCCCCccchhhhhhhhhhhhhhhhhhcccccccccccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCccc
Q 013453 240 LHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLN 319 (442)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (442)
+......+...... + +....++.+.+++.++...+..++..+....+..++|.|.... +|
T Consensus 198 ~~~~~~~~~~~~~~-~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-----~g 257 (1140)
T PRK06814 198 GNAAPDLKIDRNII-R--------------STITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKET-----LG 257 (1140)
T ss_pred CCCCCCCeeccchH-H--------------HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHH-----cC
Confidence 43322111100000 0 0112356677889998888887777777777777888777533 68
Q ss_pred CChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHH---------------HhhchhhHH
Q 013453 320 YSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIA---------------MLSGFGLAF 384 (442)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~ 384 (442)
.++.+.|.+.+..+++.+++.++ .+++.++..+++.+..+.++..++.+.+.+.. .......+.
T Consensus 258 ~~~~~~g~~~~~~~~g~~ig~~~-~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (1140)
T PRK06814 258 GDENVATLFLAVFSVGVAVGSFL-ASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWR 336 (1140)
T ss_pred CchHHHHHHHHHHHHHHHHHHHH-HHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHH
Confidence 89999999999999999999984 44555444444444444433333333222210 000012222
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhcccCCC
Q 013453 385 LLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGA 441 (442)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i~G~ 441 (442)
+.+..++.+++.....+...+++.+.+|++.+|+++|+.++...++..+++.+.|.
T Consensus 337 -~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~ 392 (1140)
T PRK06814 337 -ILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILAL 392 (1140)
T ss_pred -HHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHH
Confidence 22333334445555666788889999999999999999999999999999887664
No 80
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.95 E-value=1.5e-25 Score=212.55 Aligned_cols=377 Identities=13% Similarity=0.096 Sum_probs=246.6
Q ss_pred hhHHHHHHHHHHhHhcchhhchhHHHHHHH---hcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcc-cCCchhhH
Q 013453 41 TELFSIWIIVLCTALPISSLFPFLYFMIKD---FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPVII 116 (442)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~~~ 116 (442)
+.++.++...+...++.+...+.+|.+.++ +|.+..+ .+++.+.+.++..++++++|+++|| +|||+++.
T Consensus 10 ~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~------ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~ 83 (475)
T TIGR00924 10 KPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQ------AFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMV 83 (475)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHH------HHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHH
Confidence 446677778888888888888889888654 8999988 9999999999999999999999999 89999999
Q ss_pred HHHHHHHHHHHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccc---hhhhhhhhhHhhhhHHHHHHHhhhh
Q 013453 117 MGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEH---QALGLSTVSTAWGIGLIIGPALGGF 192 (442)
Q Consensus 117 ~~~~~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~---r~~~~~~~~~~~~~g~~~g~~~~~~ 192 (442)
++.++.+++.++.+++++++.++++|++.|++.|...| ..++++|++|+++ |++++++++.+.++|.++||.++++
T Consensus 84 ~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~ 163 (475)
T TIGR00924 84 LGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGV 163 (475)
T ss_pred HHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998888 5899999998764 8889999999999999999999999
Q ss_pred hccccccCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhccccCCCCC--CC--Cccchhhhhhh-----------
Q 013453 193 LAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHN--DD--DDSCDVSYDAL----------- 257 (442)
Q Consensus 193 l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~--~~--~~~~~~~~~~~----------- 257 (442)
+.+ ..+|+..+.+.++..++..+...+.++..++.+ ++ ++++++.....
T Consensus 164 l~~----------------~~g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (475)
T TIGR00924 164 IAE----------------NYGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVF 227 (475)
T ss_pred HHH----------------hcChHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHH
Confidence 987 334555556655544444433333332211111 00 00000000000
Q ss_pred hhh---hhh-h----------------hhhhcccccccccccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCc
Q 013453 258 ESA---SAE-V----------------KEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGG 317 (442)
Q Consensus 258 ~~~---~~~-~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (442)
... .+. . .+...++.....+-.|...+....+...++...+....+.++++.......+-
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~ 307 (475)
T TIGR00924 228 FCAWLMHHVVIANILLMTVTLAVIIFFFRLAFKPRLDAVARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEM 307 (475)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccc
Confidence 000 000 0 00000000000111122233344444445555555555556655543211111
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHhhHHH---HHHHh-hchhHHH--HHHHHHHHHHHHHHHHHHHhh---chhhHHHHHH
Q 013453 318 LNYSTQMVGEVLAITGFSLLVFQLSLYP---FLERI-LGPIMVA--RIAGVLTIPLLTSYPYIAMLS---GFGLAFLLNC 388 (442)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 388 (442)
.+++ ...+.+.+.+++..++.+++..+ .+.|| .+++... .++.++..+++..+.+..... ......+.+.
T Consensus 308 ~~~~-ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~ 386 (475)
T TIGR00924 308 LGMS-VPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVL 386 (475)
T ss_pred cceE-ECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHH
Confidence 1111 22667777888888887775544 23333 2223333 556666666665554321111 1123334555
Q ss_pred HHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhcccCC
Q 013453 389 ASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGG 440 (442)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i~G 440 (442)
..++.+.+.....|...++..+..|++.||+.+|+......+|..+++.+.+
T Consensus 387 ~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~ 438 (475)
T TIGR00924 387 IYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLAT 438 (475)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566677788888999999999999999999999999999999998876543
No 81
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.95 E-value=2e-25 Score=208.89 Aligned_cols=342 Identities=15% Similarity=0.197 Sum_probs=228.1
Q ss_pred HHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhccc-----CCch-hhHHHHH
Q 013453 47 WIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-----GRKP-VIIMGTA 120 (442)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~-----Grr~-~~~~~~~ 120 (442)
....+.+++..+.....+|.+.++.|.+.++ +|++..+... .+..+++|+++||+ |||| .+.++.+
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~------ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~ 76 (402)
T PRK11902 5 LLLGFASGLPLALTSGTLQAWMTVEGLDIQT------IGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQV 76 (402)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHH
Confidence 3456677778888889999999999999999 9999777665 59999999999999 8876 6788888
Q ss_pred HHHHHHHHHhcc---chHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccc
Q 013453 121 SVVIFNTLFGLS---VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (442)
Q Consensus 121 ~~~i~~~~~~~a---~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 196 (442)
+.+++..+.++. ++++.+++..++.++..+...+ ..+++.|++|+|+|+++.++...+.++|..+++.+++.+.+
T Consensus 77 ~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~- 155 (402)
T PRK11902 77 GLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLAD- 155 (402)
T ss_pred HHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHh-
Confidence 888877777776 3577788888888888788877 49999999999999999999999999999999999998886
Q ss_pred cccCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhcccccccc
Q 013453 197 AEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKK 276 (442)
Q Consensus 197 ~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (442)
. .++||..+.+.++..++..+..++.||++++++++++ .+ + +.....+
T Consensus 156 ------~--------~~gw~~~f~i~a~~~l~~~l~~~~~~e~~~~~~~~~~-~~---~--------------~~~~~~~ 203 (402)
T PRK11902 156 ------R--------VLGWGNTYLLMAGLMLAGALTTLWAPEPEVPARPPRS-LG---E--------------AVVGPLR 203 (402)
T ss_pred ------c--------ccCHHHHHHHHHHHHHHHHHHHHhcCCCcccccccch-hH---H--------------HHHHHHH
Confidence 1 1356666677777666655555667776543211110 00 0 0112355
Q ss_pred cccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHH-HHHHHHhhHHHHHHHhhchhH
Q 013453 277 SLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGF-SLLVFQLSLYPFLERILGPIM 355 (442)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 355 (442)
+++|+|.++..++..++..........+.+.++. +++|+++.+.+......+. +.+++.. +.+++.||+++++
T Consensus 204 ~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~-----~~~G~~~~~~g~~~~~~~~~~~i~g~~-~~g~l~~r~g~~~ 277 (402)
T PRK11902 204 DFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLI-----RGAGFSAGEVGIVNKTLGLAATIVGAL-AGGTLMVRLGLYR 277 (402)
T ss_pred HHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHH-----HhcCCCHHHHHHHHhHHHHHHHHHHHH-HHHHHHHHHhHHH
Confidence 6889998887776666655443333233333322 3368999999998866554 4667666 7778888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHH---HHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHH
Q 013453 356 VARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCAS---VVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFK 432 (442)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 432 (442)
....+.....+....+......++ ..+....... +..+............++++..|.++++ +.+....++.
T Consensus 278 ~l~~~~~~~~l~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~ 352 (402)
T PRK11902 278 SLMLFGVLQAVSNLGYWVLAVTPK-HLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQYA----LLSALASVGR 352 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHH----HHHHHHHHHH
Confidence 776666555544433322221111 1222221111 2233334444556677777777766554 3444444555
Q ss_pred hhhcccCC
Q 013453 433 AAGPAGGG 440 (442)
Q Consensus 433 ~~gp~i~G 440 (442)
.+++.++|
T Consensus 353 ~~~~~~~G 360 (402)
T PRK11902 353 VYVGPTSG 360 (402)
T ss_pred HHHHHHHH
Confidence 44444444
No 82
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.95 E-value=2.4e-27 Score=230.81 Aligned_cols=311 Identities=16% Similarity=0.143 Sum_probs=228.0
Q ss_pred HHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHH
Q 013453 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (442)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i 124 (442)
...+..+...+..+...+.++.+.++|+++..+ .|++.+.+.+++.++.++.|+++||+|||+.+.++.+++++
T Consensus 37 ~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~------~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~l 110 (633)
T TIGR00805 37 LLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSS------SGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGL 110 (633)
T ss_pred HHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCc------ceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHH
Confidence 344456666667788888999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHhccc---------------------------------------------------hHHHHHHHHHHHHhhcchhh
Q 013453 125 FNTLFGLSV---------------------------------------------------NFWMAVLTRFLLGSLNGLLG 153 (442)
Q Consensus 125 ~~~~~~~a~---------------------------------------------------~~~~l~~~r~l~G~~~g~~~ 153 (442)
+++++++.+ .+..++++|+++|+|.+...
T Consensus 111 g~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~ 190 (633)
T TIGR00805 111 GSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIF 190 (633)
T ss_pred HHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcch
Confidence 999987752 25567899999999999988
Q ss_pred H-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCC---------cccccccccCCcChhHHHHHH
Q 013453 154 P-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPN---------LFSSESLFGKFPYFLPCLCIS 223 (442)
Q Consensus 154 ~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~---------~~gw~~~~~~~~~~~~~~~~~ 223 (442)
+ ..+++.|++|+++|++.+++++.+..+|.++|+++++++.+...+|.. -..|| | ..+||..|++.+
T Consensus 191 ~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dpr--W-iGaWwl~Fli~g 267 (633)
T TIGR00805 191 PLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPR--W-IGAWWIGFLICG 267 (633)
T ss_pred hcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCcc--H-HHHHHHHHHHHH
Confidence 8 599999999999999999999999999999999999999863221110 00111 1 235888888888
Q ss_pred HHHHHHHHHHhhccccCCCCCCCCccchhhhhhhhhhhhhh-h---hhhcccccccccccccchhHHHHHHHHHHHHHHh
Q 013453 224 LFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEV-K---EEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDM 299 (442)
Q Consensus 224 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (442)
++.++..+.++++|++.+....+.+.+....++.++..++. . +..++.....+++++||.++...+..++......
T Consensus 268 ~l~~l~~v~l~~~p~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~ 347 (633)
T TIGR00805 268 GVALLTSIPFFFFPKALPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFN 347 (633)
T ss_pred HHHHHHHHHHHhCccccCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH
Confidence 88777766666777654322111100000000000000000 0 0011122346678999999999999999888888
Q ss_pred hHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHH-HHHHHHhhHHHHHHHhhc--hhHHHHHHHHHHHHHHHH
Q 013453 300 AYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGF-SLLVFQLSLYPFLERILG--PIMVARIAGVLTIPLLTS 370 (442)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 370 (442)
++..+.|.|+... +|+++.+++.+.....+ +.+++.+ +++++.||++ .++.+..+..+..+..+.
T Consensus 348 ~~~~~lP~yl~~~-----~g~s~~~ag~l~~~~~i~~~~vG~~-l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~ 415 (633)
T TIGR00805 348 GYITFLPKYLENQ-----YGISSAEANFLIGVVNLPAAGLGYL-IGGFIMKKFKLNVKKAAYFAICLSTLSYLL 415 (633)
T ss_pred HHHHHHHHHHHHH-----cCCcHHHHHHHhhhhhhhHHHHHHh-hhhheeeeecccHHHHHHHHHHHHHHHHHH
Confidence 8989999888743 78999999999887776 4456665 6777777766 456666666665555433
No 83
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.95 E-value=2.4e-25 Score=211.16 Aligned_cols=376 Identities=15% Similarity=0.067 Sum_probs=235.9
Q ss_pred ChhhHHHHHHHHHHhHhcchhhchhHHHH-HHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcc-cCCchhhH
Q 013453 39 PITELFSIWIIVLCTALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPVII 116 (442)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~~~ 116 (442)
+++.++.++...+...++++...+.++.+ .+++|.+..+ .+++.+.+.....+..+++|+++|| +||||+++
T Consensus 12 ~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~------a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~ 85 (489)
T PRK10207 12 QPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQ------AFITFGAFAALVYGLISIGGYVGDHLLGTKRTIV 85 (489)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHH
Confidence 34567777777777777777777666544 6779999988 9999999998888999999999999 99999999
Q ss_pred HHHHHHHHHHHHHhccchHHH-HHHHHHHHHhhcchhhH-HHHHhhhhcccc--chhhhhhhhhHhhhhHHHHHHHhhhh
Q 013453 117 MGTASVVIFNTLFGLSVNFWM-AVLTRFLLGSLNGLLGP-IKAYACEIFREE--HQALGLSTVSTAWGIGLIIGPALGGF 192 (442)
Q Consensus 117 ~~~~~~~i~~~~~~~a~~~~~-l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~~~~~ 192 (442)
++.+++.++.++++++++... ++++|+++|+|.|...| ..+++.|.+|++ +|++++++++.+.++|..+||.++++
T Consensus 86 ~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~ 165 (489)
T PRK10207 86 LGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPV 165 (489)
T ss_pred HHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999876554 55899999999999888 599999999877 45789999999999999999999999
Q ss_pred hccccccCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhccccCCCCC--CCCccch---hhh------------h
Q 013453 193 LAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHN--DDDDSCD---VSY------------D 255 (442)
Q Consensus 193 l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~--~~~~~~~---~~~------------~ 255 (442)
+.+ +.||| ..|.+.++..++.++.+...++..++.+ .+++..+ ... .
T Consensus 166 l~~-------~~gw~---------~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~ 229 (489)
T PRK10207 166 IAD-------KFGYS---------VTYNLCGAGLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCA 229 (489)
T ss_pred HHH-------hhChH---------HHHHHHHHHHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHH
Confidence 998 44544 4445544433333333333333221111 1010001 000 0
Q ss_pred hhhhhhhhhhhh------------hcccccccccccccchhHHHHHH--HHHHHHHHhhHHHHHHHHhcCCcccCcccCC
Q 013453 256 ALESASAEVKEE------------EGREATPKKSLLKNWPLMSSIIV--YCVFSLHDMAYSEIFSLWANSPKKLGGLNYS 321 (442)
Q Consensus 256 ~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (442)
...+.. ..... -........+.+|+|.+....+. ..++...+......++.+.......+..|+.
T Consensus 230 ~~~~~~-~~~~~~~~~~~~i~~~~f~~~~~~~~~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~ 308 (489)
T PRK10207 230 WLMHNV-EVANLVLIVLSIVVTIIFFREAFKLDKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFS 308 (489)
T ss_pred HHHhhh-hHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceE
Confidence 000000 00000 00000011245566655433322 3333333444445566665532222222333
Q ss_pred hhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhH-------HHHHHHHHHHHHHHHHHHHH----HhhchhhHHHHHHHH
Q 013453 322 TQMVGEVLAITGFSLLVFQLSLYPFLERILGPIM-------VARIAGVLTIPLLTSYPYIA----MLSGFGLAFLLNCAS 390 (442)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 390 (442)
.. ...+...+.+..++..++. .++.+|.++|+ .+.+++++..++++.+.... .........+.+...
T Consensus 309 i~-~~~~~~~n~~~iii~~pl~-~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~ 386 (489)
T PRK10207 309 IN-PVSFQALNPFWVVVASPIL-AGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVY 386 (489)
T ss_pred EC-HHHHHhHhHHHHHHHHHHH-HHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHH
Confidence 21 2333344445555556634 45666666664 35566666666654332111 111111222244455
Q ss_pred HHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhcccC
Q 013453 391 VVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGG 439 (442)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i~ 439 (442)
++.+.+.....+.....+.+..|++.+|.++|+.+...++|+.+|..++
T Consensus 387 ~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~ 435 (489)
T PRK10207 387 LFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVA 435 (489)
T ss_pred HHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566677778888888888999999999999999999999998887654
No 84
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.95 E-value=1e-25 Score=210.61 Aligned_cols=353 Identities=13% Similarity=0.126 Sum_probs=231.6
Q ss_pred hHHHHHHHHHHhHhcchhhchhHHHHH-HHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHH
Q 013453 42 ELFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (442)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~ 120 (442)
.++.+....++...+.....|.+|.+. +++|.+..+ .|++.+.+.++..++++++|+++||+|||+.++.+..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~------~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~ 76 (396)
T TIGR00882 3 NFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTD------TGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIIS 76 (396)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 355666677777778888889988765 568999999 9999999999999999999999999999999988776
Q ss_pred HHHHHHHHH---hccc-----hHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhh
Q 013453 121 SVVIFNTLF---GLSV-----NFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGG 191 (442)
Q Consensus 121 ~~~i~~~~~---~~a~-----~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 191 (442)
...++.... .+.+ ....+++.|++.|++.+...+ ...+..|.. +++++.++......++|.++||.+++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g 154 (396)
T TIGR00882 77 GLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAG 154 (396)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHh
Confidence 665544322 2222 234456778888988777777 466766643 33456778888888999999999999
Q ss_pred hhccccccCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhh-ccccCCCCCCCCccchhhhhhhhhhhhhhhhhhcc
Q 013453 192 FLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFW-LPETLHRHNDDDDSCDVSYDALESASAEVKEEEGR 270 (442)
Q Consensus 192 ~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (442)
.+.+ .+|+.++.+.+++.++..+..+. .||+++++. +++..+ ++++++
T Consensus 155 ~l~~-----------------~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-------------~~~~~~ 203 (396)
T TIGR00882 155 ILFS-----------------IDPQIVFWLGSGFALILMLLLMFAKPKAPSSAT-VANALG-------------ANASAF 203 (396)
T ss_pred hhhc-----------------cCchHHHHHHHHHHHHHHHHHHHhCCCCchhhh-hhcccc-------------cccCCC
Confidence 8764 24555667777666665544444 333322111 000000 000111
Q ss_pred cccccccccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHh
Q 013453 271 EATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI 350 (442)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (442)
+.++.++++|||+++...+..+...........+++.|+..... +.+.+....|...+...+...++.. ..+++.||
T Consensus 204 ~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~--~~~~~~~~~g~~~~~~~i~~~~~~~-~~g~l~~r 280 (396)
T TIGR00882 204 SLKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFA--TPQQGTRVFGYVTTMGELLNALIMF-CAPLIINR 280 (396)
T ss_pred CHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--ccccchHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 12345678899988776666555554444555566666654321 2355667788888888888888877 66677788
Q ss_pred hchhHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHH-HHHHHH
Q 013453 351 LGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGI-AMTGMS 429 (442)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~-~~~~~~ 429 (442)
.++|+...++..+.++...+..... ..+.. .....+.+............+..+..|++.++++.+. .+....
T Consensus 281 ~g~~~~l~~~~~l~~l~~~~~~~~~-----~~~~~-~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~ 354 (396)
T TIGR00882 281 IGAKNALLIAGTIMSVRIIGSSFAT-----TALEV-VILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQ 354 (396)
T ss_pred hccchhHHHHHHHHHHHHHHHHhcC-----ChHHH-HHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHH
Confidence 8999988877776666555433321 12221 2222322222222223344456666788888887776 678889
Q ss_pred HHHhhhcccCCCC
Q 013453 430 LFKAAGPAGGGAL 442 (442)
Q Consensus 430 ~g~~~gp~i~G~l 442 (442)
+|++++|.+.|++
T Consensus 355 lg~~~~~~l~G~l 367 (396)
T TIGR00882 355 LAMIFLSTLAGNM 367 (396)
T ss_pred HHHHHHHHhHHHH
Confidence 9999999988863
No 85
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.95 E-value=5.6e-26 Score=194.07 Aligned_cols=369 Identities=16% Similarity=0.103 Sum_probs=252.1
Q ss_pred hhhHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHH
Q 013453 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (442)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~ 119 (442)
+.........+..+.+-......+.|...+..+.+..+ ..++....+.+..+++..||..+|++|||+.+.+..
T Consensus 77 ~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q------~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~ 150 (528)
T KOG0253|consen 77 WYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQ------APLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTF 150 (528)
T ss_pred hhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhh------hhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhH
Confidence 34444555566666666566667778888899988888 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccc
Q 013453 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (442)
Q Consensus 120 ~~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 198 (442)
...++...+.+.++|+..+.+.|.+.|+|.|. .| ..++-.|..|..+|...+-.. +.+.+|.++...++..+..
T Consensus 151 l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~--- 225 (528)
T KOG0253|consen 151 LVTGVFGVISGASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMS--- 225 (528)
T ss_pred HHHHHHHHhhcCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHH---
Confidence 99999999999999999999999999999888 55 588889999999999887777 9999999999999999888
Q ss_pred cCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhccccCCCCCCCCccchhhh--hhhhhhh-------------hh
Q 013453 199 KYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSY--DALESAS-------------AE 263 (442)
Q Consensus 199 ~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~--~~~~~~~-------------~~ 263 (442)
.+|||+.+ .....+..+.....+++||+|+....+.++.++.. +++++.+ ++
T Consensus 226 ----~~gwr~~l---------~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~ 292 (528)
T KOG0253|consen 226 ----NFGWRYLL---------FTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAID 292 (528)
T ss_pred ----hhhHHHHH---------HHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhh
Confidence 66766655 66666666667778899999988654443333221 1111110 00
Q ss_pred hhh------------hhcccccccccccccchhHHHHHHHHHHHHHHhhHHH---HHHHHhcCCccc----Ccc------
Q 013453 264 VKE------------EEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSE---IFSLWANSPKKL----GGL------ 318 (442)
Q Consensus 264 ~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~----~~~------ 318 (442)
.++ ..++......+++..+--+..++....++...+.+.. ....+.+.-... ..+
T Consensus 293 ~~e~e~~~~~~~~~~a~ke~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~ 372 (528)
T KOG0253|consen 293 RQEQEESDLDDSKSSAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELET 372 (528)
T ss_pred hhhhhhhchhhhhhccccccccchHhhcChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHh
Confidence 000 1122233344444433223333333333332222221 111222211000 000
Q ss_pred ----cCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHH
Q 013453 319 ----NYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKN 394 (442)
Q Consensus 319 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (442)
..+..+--.-.....+..+.|.+ +..++.+|+|||+.+..++++.+++.+++....... ....+. +..-
T Consensus 373 ~~~c~~s~~~dYrdllitslaefPGlL-It~~iverlGRKkTMal~l~~f~iflfll~~c~~rn--~~tvll----f~ar 445 (528)
T KOG0253|consen 373 RANCPLSVAKDYRDLLITSLAEFPGLL-ITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRN--AYTVLL----FTAR 445 (528)
T ss_pred hhcCCccchhHHHHHHHHHHhhCCchh-HHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcc--hhHHHH----HHHH
Confidence 01111111122334667777766 777888889999999999999888877766554322 111112 2222
Q ss_pred HHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhcccC
Q 013453 395 LLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGG 439 (442)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i~ 439 (442)
++..+.+.+.+.+..|++|+..|+++.|.+.....+|+++.|.++
T Consensus 446 afisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA 490 (528)
T KOG0253|consen 446 AFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA 490 (528)
T ss_pred HHHhchheEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH
Confidence 345566778899999999999999999999999999999999764
No 86
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.95 E-value=5.6e-26 Score=213.98 Aligned_cols=355 Identities=13% Similarity=0.100 Sum_probs=222.8
Q ss_pred hhHHHHHHHHHHhHhcchhhchhHHHHHHH-hcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHH
Q 013453 41 TELFSIWIIVLCTALPISSLFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (442)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~ 119 (442)
++.+.+....++..+..+...+.+|.+.++ +|.+..+ .|++.+++.++..++++++|+++||+|||++++++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~------~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~ 83 (420)
T PRK09528 10 PNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTD------TGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWII 83 (420)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHH
Confidence 345666667777777777888888877655 9999999 999999999999999999999999999999998876
Q ss_pred HHHHHHHHHHh---ccc-----hHHHHHHHHHHHHhhcchhhHH-HHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhh
Q 013453 120 ASVVIFNTLFG---LSV-----NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG 190 (442)
Q Consensus 120 ~~~~i~~~~~~---~a~-----~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 190 (442)
.+..++..... .++ .....++++++.|.+.....+. ..+. +.. .+++++.++......++|..++|.++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~g~~~g~~~~~~~~g~~i~~~~~ 161 (420)
T PRK09528 84 SGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYI-ERV-SRRSGFEYGRARMWGSLGWALCAFIA 161 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHH-HHH-HhhccccchhhHHhhhHHHHHHHHHH
Confidence 66555433221 111 1111222333333332232332 3333 222 34677888999999999999999999
Q ss_pred hhhccccccCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhcc
Q 013453 191 GFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGR 270 (442)
Q Consensus 191 ~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (442)
+.+.+ .+|+.++.+.++..++..+..++.+++++++.+.+++.++ ++++.
T Consensus 162 g~l~~-----------------~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~ 211 (420)
T PRK09528 162 GILFN-----------------INPQINFWLGSGSALILLVLLFFAKPDAPSTAKVANALGA-------------NASAV 211 (420)
T ss_pred HHHHh-----------------cCchHhHHHHHHHHHHHHHHHhcccccccchhhhccchhc-------------ccccc
Confidence 99875 1344455666666655555444443332221110000000 00001
Q ss_pred cccccccccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHh
Q 013453 271 EATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI 350 (442)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (442)
..+..++.+|+|.++...+..+.............+.|..+.. .+.+.+..+.|.+.+...+...++.+ ..+++.||
T Consensus 212 ~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~-~~g~l~dr 288 (420)
T PRK09528 212 SLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFF--ATPEQGTRVFGYLNSFQVFLEALIMF-FAPFIINR 288 (420)
T ss_pred cHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHH--hccCcchHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 1122345778888776555544444444444445666554321 12356777889999888888888877 77778888
Q ss_pred hchhHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHH-HHHHHH
Q 013453 351 LGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGI-AMTGMS 429 (442)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~-~~~~~~ 429 (442)
+++|+....+..+..+...++.+.. ..+. ......+.+.......+....+.++..|++.+++..++ .++...
T Consensus 289 ~g~~~~~~~~~~l~~~~~~l~~~~~-----~~~~-~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 362 (420)
T PRK09528 289 IGAKNALLLAGTIMAVRIIGSGFAT-----GPLE-VSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQ 362 (420)
T ss_pred hCcchhhHHHHHHHHHHHHHHHhcc-----cHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHH
Confidence 8999988877777776666554432 1222 22222323333333344556677888899999988766 677788
Q ss_pred HHHhhhcccCCCC
Q 013453 430 LFKAAGPAGGGAL 442 (442)
Q Consensus 430 ~g~~~gp~i~G~l 442 (442)
+|.+++|.+.|++
T Consensus 363 lg~~ig~~~~G~l 375 (420)
T PRK09528 363 LGAVFLSTLAGNL 375 (420)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988753
No 87
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.95 E-value=1e-24 Score=205.06 Aligned_cols=354 Identities=14% Similarity=0.135 Sum_probs=227.9
Q ss_pred hHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhcc
Q 013453 53 TALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS 132 (442)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a 132 (442)
..+........++.+.+|+|-++. ..|+.+.+.++..++.++.|+++|.||||.+++.+.++..++.++++.+
T Consensus 56 ~~~~~~~~a~~l~~I~~diG~~~~-------~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA 128 (599)
T PF06609_consen 56 AYFVLVLPASILPYINADIGGSDN-------WSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATA 128 (599)
T ss_pred HHHHHhccHHHHHHHHHhcCCCcc-------chHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcC
Confidence 344445556777899999988754 6899999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHhhcchhhHHHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCcccccccccC
Q 013453 133 VNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGK 212 (442)
Q Consensus 133 ~~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~ 212 (442)
+|...++++-.+.|+|.|........++|..|.|.|....++.....-.....+|.++..+.. ..+|||.|
T Consensus 129 ~~~~~~iag~~l~GvgaG~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~-------~~~WRw~~-- 199 (599)
T PF06609_consen 129 QNMNTFIAGMVLYGVGAGVQELAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAA-------HSGWRWIF-- 199 (599)
T ss_pred CcHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhcc-------CCCcchHH--
Confidence 999999999999999988877667779999999999888777766655555667777776665 34555444
Q ss_pred CcChhHHHHHHHHHHHHHHH--HhhccccCCCCCCCCccchhhhhhhhh-------------------------hhhhhh
Q 013453 213 FPYFLPCLCISLFAFGVTIA--AFWLPETLHRHNDDDDSCDVSYDALES-------------------------ASAEVK 265 (442)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~--~~~~~e~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~ 265 (442)
++..+...+.++. +++.|.+++..+.++...++...+++- .+++.+
T Consensus 200 -------~~~~i~~~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~ 272 (599)
T PF06609_consen 200 -------YIFIIWSGIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAH 272 (599)
T ss_pred -------HHHHHHHHHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCcc
Confidence 4444444443322 223333322211111111111111110 000000
Q ss_pred ------------------hh--hcccccccccccccc-hhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCCh--
Q 013453 266 ------------------EE--EGREATPKKSLLKNW-PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYST-- 322 (442)
Q Consensus 266 ------------------~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 322 (442)
|. ..+++....+++|++ .+...++..++....+++...++|...... ++-++
T Consensus 273 VIa~lviG~~~Lv~F~~wE~~~~~~~Pl~P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~v-----f~~d~~~ 347 (599)
T PF06609_consen 273 VIAPLVIGFVLLVAFVVWEWFGAPKDPLFPHRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNV-----FGSDPIS 347 (599)
T ss_pred chhhHHHHHHHHHHHHHhhhhccCCCCcCCHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----ccCCCcc
Confidence 11 123455667788874 465556666666666666666776655433 22232
Q ss_pred -hHHHHHHHHHHHHHHHHHhhHHHHHHHhhch-hHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHH
Q 013453 323 -QMVGEVLAITGFSLLVFQLSLYPFLERILGP-IMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSI 400 (442)
Q Consensus 323 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (442)
...++.....+.+..++..+.+. +.++.++ |+.+..+.++..+++.++..... ++...++.+ .++.+.+....
T Consensus 348 ~~~~~~~s~~~~fg~~~g~~i~g~-l~~~ir~~Kw~li~~~~~~ta~~Gama~~~~-~n~~~~i~~---~~l~g~giG~~ 422 (599)
T PF06609_consen 348 ITEIGWISSPVGFGSCAGAVILGL-LFSKIRHIKWQLIFGSVLMTAFCGAMAAVRP-DNKNAAIAF---LVLAGFGIGGI 422 (599)
T ss_pred cceeehhhhhHHHHHHHHHHHHHH-HHHHccchhHHHHHHHHHHHHHHHHHHHccC-CCcchHHHH---HHHHHHhHHHH
Confidence 24667777777777777764444 4444444 44555665555555555443322 222222211 12222223333
Q ss_pred HHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhcccC
Q 013453 401 ITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGG 439 (442)
Q Consensus 401 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i~ 439 (442)
........+-..|+++.|++.|+..+++.+|+.+|..+.
T Consensus 423 ~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy 461 (599)
T PF06609_consen 423 LVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIY 461 (599)
T ss_pred HHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 344455666678999999999999999999999987654
No 88
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.95 E-value=1.7e-25 Score=195.05 Aligned_cols=360 Identities=16% Similarity=0.166 Sum_probs=272.4
Q ss_pred hhhHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHH
Q 013453 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (442)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~ 119 (442)
+..+..+....++.++......+.+|.+.+.++++..| .+++..+++.++.+.+++.|++.+|+|+|+.++.++
T Consensus 12 ~~~~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~------a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL 85 (422)
T COG0738 12 KLAFVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFE------ASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGL 85 (422)
T ss_pred eeHHHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHH------HHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHH
Confidence 34456667777888888888999999999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHh---ccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhcc
Q 013453 120 ASVVIFNTLFG---LSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 120 ~~~~i~~~~~~---~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (442)
.++++++.++. ...++..++++-++.|.|.+...+ ++.+++...++++-.+.+++.+..+++|..++|++++.+..
T Consensus 86 ~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lil 165 (422)
T COG0738 86 LLYAVGAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLIL 165 (422)
T ss_pred HHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 99999999885 456899999999999999999988 59999999999999999999999999999999999999986
Q ss_pred ccc----cCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhc--cccCCCCCCCCccchhhhhhhhhhhhhhhhhhc
Q 013453 196 PAE----KYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWL--PETLHRHNDDDDSCDVSYDALESASAEVKEEEG 269 (442)
Q Consensus 196 ~~~----~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (442)
+.. +-+....|+... -..++.++...+...++..+..... |+.+....++.+
T Consensus 166 s~~~~~~~~~~~~~~~~~~-~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~~~~--------------------- 223 (422)
T COG0738 166 SGVALTMSAAQILAIKGAD-ASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAPSLGA--------------------- 223 (422)
T ss_pred hhhhhccCHHHHHHHHHHH-HHhhhhHHHHHHHHHHHHHHHHHhccCCcCCcccccccc---------------------
Confidence 210 000011122211 2235666666665555444443332 222211111100
Q ss_pred ccccccccccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHH
Q 013453 270 REATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLER 349 (442)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (442)
+......+++++|.++...+..+++........++++.|...+ .|.+..+++...+....+.++|++ ++.++-+
T Consensus 224 ~~~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~-----~g~~~~~aa~~~s~~~~~~~vGRF-ig~~lm~ 297 (422)
T COG0738 224 SGSAGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEEL-----LGLNEQQAAYYLSFFWVGFMVGRF-IGSALMS 297 (422)
T ss_pred cccchHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhc-----CCccHHHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 0111456789999999999999999999999999999998764 588999999999999999999998 5555556
Q ss_pred hhchhHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHH
Q 013453 350 ILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMS 429 (442)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 429 (442)
|+...+.+........+.++...+... .+........+.+....+|..++...+..| ++...+ |.......
T Consensus 298 ~~~~~k~Laf~a~~~ill~~~~~l~~g-------~v~~~~l~~ig~F~simfPTIfslal~~l~-~~ts~~-s~~l~mai 368 (422)
T COG0738 298 RIKPEKYLAFYALIAILLLLAVALIGG-------VVALYALFLIGLFNSIMFPTIFSLALKNLG-EHTSVG-SGLLVMAI 368 (422)
T ss_pred HhCHHHHHHHHHHHHHHHHHHHHHhcC-------hHHHHHHHHHHHHhHHHHHHHHHHHHhccC-cccccc-ceeeeehe
Confidence 888888887777666666666555432 112223334455677888999999999898 444444 44455677
Q ss_pred HHHhhhcccCCCC
Q 013453 430 LFKAAGPAGGGAL 442 (442)
Q Consensus 430 ~g~~~gp~i~G~l 442 (442)
+|+++-|.+.|++
T Consensus 369 vGGAiiP~l~G~i 381 (422)
T COG0738 369 VGGAIIPPLQGVI 381 (422)
T ss_pred ecchHHHHHHHHH
Confidence 8889999887753
No 89
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.94 E-value=3.6e-28 Score=213.76 Aligned_cols=391 Identities=14% Similarity=0.054 Sum_probs=247.4
Q ss_pred HHHHHHHHHHhHhcchhhchhHHHHHHHh-ccccc-chhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHH
Q 013453 43 LFSIWIIVLCTALPISSLFPFLYFMIKDF-QIAKR-EEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (442)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~ 120 (442)
+.+..++.+.+..+..+++.+.|.+...+ |.++. .+..+-..+.+..+..+|..+||+++|+++||+|||+++...++
T Consensus 43 i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~li 122 (538)
T KOG0252|consen 43 IIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELI 122 (538)
T ss_pred HHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHH
Confidence 33455678889999999999998887655 33311 11223338899999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccc-------hHHHHHHHHHHHHhhcchhhHH-HHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhh
Q 013453 121 SVVIFNTLFGLSV-------NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGF 192 (442)
Q Consensus 121 ~~~i~~~~~~~a~-------~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 192 (442)
++.++++++++.. -.+++...|++.|+|.|.-+|. .+..+|...++.||..++..-+..+.|...|.+++-.
T Consensus 123 ImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~I 202 (538)
T KOG0252|consen 123 IMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALI 202 (538)
T ss_pred HHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHH
Confidence 9999999887742 3578999999999999999995 8888999999999999999998999888888888777
Q ss_pred hccccccCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhccccCCCCCCCCccc----hhhhhhhhhhhhhhh--h
Q 013453 193 LAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSC----DVSYDALESASAEVK--E 266 (442)
Q Consensus 193 l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~----~~~~~~~~~~~~~~~--~ 266 (442)
+....+.--+..+-..-. ..-||+.+.+..++++..+...+.+||+++.....++.. ++..+.+....++++ +
T Consensus 203 v~~~fe~~~~~~~~~~~l-d~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~~~~~ 281 (538)
T KOG0252|consen 203 VSAIFEKIFNGPSTYPHL-DGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLKQAAGDMKKVLSVDIEAESTAE 281 (538)
T ss_pred HHHHHhccCCCCCCchHH-HHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhhhhhccccccccccchhhccc
Confidence 665433211111111111 446899888888888888888888999987652111110 000001110000000 0
Q ss_pred hhcccccc----cccccccchhHHH---HHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHH--------HHHH
Q 013453 267 EEGREATP----KKSLLKNWPLMSS---IIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGE--------VLAI 331 (442)
Q Consensus 267 ~~~~~~~~----~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~ 331 (442)
...+.+.. +...+..+....+ ....++.-..++...-+... ..++.++.+..... ...+
T Consensus 282 ~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~------I~~~ig~~~~~~~~~~~~~vA~~~~i 355 (538)
T KOG0252|consen 282 SDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSV------IFSAIGVIPSANTYHELFKVAEGNLI 355 (538)
T ss_pred cCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHH------HHHhhccCCCcchHHHHHHHHHHHHH
Confidence 01111111 2222222222222 22233322222222222211 22223443333222 2222
Q ss_pred HHHHHHHHHhhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhccc
Q 013453 332 TGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRA 411 (442)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (442)
...+..+-...+...+.|++||++....++.+..+..+.+...-+... ...-..++..+...+..++.........+|.
T Consensus 356 ia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~-~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~ 434 (538)
T KOG0252|consen 356 IAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLE-NTIGFVVLYSLTFFFGNFGPNATTFIVPAEI 434 (538)
T ss_pred HHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCccccc-ccCceeehHHHHHHHHhcCCCceeEEeehhh
Confidence 222222212224455678889999999999998888777665332111 1122233333444455566666778889999
Q ss_pred CChhhhhHHHHHHHHHHHHHHhhhcccCCC
Q 013453 412 VDQDQRGAANGIAMTGMSLFKAAGPAGGGA 441 (442)
Q Consensus 412 ~~~~~~g~~~g~~~~~~~~g~~~gp~i~G~ 441 (442)
+|.+.|+++.|+....+..|+++|....++
T Consensus 435 FParvR~t~hGIsAA~GK~GAivg~~~F~~ 464 (538)
T KOG0252|consen 435 FPARVRSTCHGISAASGKAGAIVGAFGFLY 464 (538)
T ss_pred chHHHhhhhhhHHHHhccchHHHHHHHhhH
Confidence 999999999999999999999998776543
No 90
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.94 E-value=4.6e-24 Score=200.69 Aligned_cols=363 Identities=17% Similarity=0.157 Sum_probs=256.2
Q ss_pred HHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHH
Q 013453 44 FSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVV 123 (442)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~ 123 (442)
+..++......-....+....+.++++++.+..+ ++|+.++......+.+|+.+.+.||+|.|++.+.|.++..
T Consensus 49 ~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~------~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~ 122 (509)
T KOG2504|consen 49 FASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQ------IAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAA 122 (509)
T ss_pred HhHHHHHHhhhcchheehhhHHHHHHHhCCCccH------HHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHH
Confidence 3333444444434455557779999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHHhccchHHHHHHHH-HHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCC
Q 013453 124 IFNTLFGLSVNFWMAVLTR-FLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYP 201 (442)
Q Consensus 124 i~~~~~~~a~~~~~l~~~r-~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~ 201 (442)
++.++.++++++|++++.. ++.|+|.|+... +...+..+|+ |+|+.+.|+...+.++|.++-|.+..++.+
T Consensus 123 ~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~-kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~------ 195 (509)
T KOG2504|consen 123 LGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFE-KKRALATGIAVSGTGVGTVVFPPLLKYLLS------ 195 (509)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHhH-HHHHHHHhhhhccCCcceeeHHHHHHHHHH------
Confidence 9999999999999988866 888999888665 6777776554 789999999999999999999999999998
Q ss_pred CcccccccccCCcChhHHHHHHHHHHHHHHHHhhccc-cCCCCCC----------------------CCccchhhhh---
Q 013453 202 NLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPE-TLHRHND----------------------DDDSCDVSYD--- 255 (442)
Q Consensus 202 ~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e-~~~~~~~----------------------~~~~~~~~~~--- 255 (442)
..+||....+.+.+.+-.++....+++ +++..+. ...+.+...+
T Consensus 196 ----------~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (509)
T KOG2504|consen 196 ----------KYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSL 265 (509)
T ss_pred ----------HhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhccccccccccccccccccccCCCCCCcccc
Confidence 555555556666666555444333333 2221000 0000000000
Q ss_pred -hhhhhhh-hhhhhhccccc-c---cccccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHH
Q 013453 256 -ALESASA-EVKEEEGREAT-P---KKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVL 329 (442)
Q Consensus 256 -~~~~~~~-~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (442)
..+...+ +++.+....+. . ..++++++.++...+...+..........+++.+.. ..+++..+++.+.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~------~~g~~~~~aa~l~ 339 (509)
T KOG2504|consen 266 SNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAK------SLGLSSNDAAFLL 339 (509)
T ss_pred cchhhhhhCCccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHh------hcCCChhhhHHHH
Confidence 0000000 00000001111 1 257899999988888888877777766666666654 3689999999999
Q ss_pred HHHHHHHHHHHhhHHHHHHHhhc--hhHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhh
Q 013453 330 AITGFSLLVFQLSLYPFLERILG--PIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFIL 407 (442)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (442)
++.++..+++++ +.+++.|+.. ++....++.+..++.....+.... . ..+.....+.++............
T Consensus 340 Siigi~~i~gRi-~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~-----~-~~l~~~~~~fG~~~g~~~~l~~~i 412 (509)
T KOG2504|consen 340 SIIGVSDIIGRI-ILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATT-----Y-VGLIVFSILFGFCVGSFSSLTPVI 412 (509)
T ss_pred HHHHHhhhhhhh-hhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhcc-----H-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999 6667776644 444555555555555544444321 1 223344444444444555555678
Q ss_pred hcccCChhhhhHHHHHHHHHHHHHHhhhcccCCCC
Q 013453 408 QNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGAL 442 (442)
Q Consensus 408 ~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i~G~l 442 (442)
+.+.++.++-..+.|+...++.++..+||+++|++
T Consensus 413 ~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~ 447 (509)
T KOG2504|consen 413 LVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLL 447 (509)
T ss_pred HHHHcChhhcchHHHHHHHHhHHHHHcCcccceee
Confidence 88999999999999999999999999999999864
No 91
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.94 E-value=1.1e-23 Score=196.47 Aligned_cols=348 Identities=13% Similarity=0.048 Sum_probs=229.9
Q ss_pred HHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHH--HHHHHHHHHhhhhhhhh-hhcccCCchhhHHHH
Q 013453 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYV--GSSFMFGRALTSVFWGL-VADRYGRKPVIIMGT 119 (442)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~s~~~~~~~~~~~~~G~-l~dr~Grr~~~~~~~ 119 (442)
+..+....+.+++..+...|.+|.+.+|.|.+.++ +|++ .+...+...+.+|+++. ..||+||||..++..
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~------iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~ 76 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTA------LAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPM 76 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHH
Confidence 45566778888999999999999999999999999 9997 46678888888888854 799999999976655
Q ss_pred HHH-HHHHHHHh---ccch-HHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhh
Q 013453 120 ASV-VIFNTLFG---LSVN-FWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (442)
Q Consensus 120 ~~~-~i~~~~~~---~a~~-~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 193 (442)
.+. .+.....+ ...+ ..+++..-++.++..+...+ ..++..|..++++++...+....+..+|.++|+.+.+++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l 156 (390)
T TIGR02718 77 QCLVSACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVL 156 (390)
T ss_pred HHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 332 22222222 2222 33444444555566666666 477888888888888888888888899999999988898
Q ss_pred ccccccCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhccccc
Q 013453 194 AQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREAT 273 (442)
Q Consensus 194 ~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (442)
.+ ..+|+.++.+.+++.++..+..++++|+++++++++ +. ...
T Consensus 157 ~~----------------~~gw~~~f~~~a~l~~~~~~~~~~~~~~~~~~~~~~---~~------------------~~~ 199 (390)
T TIGR02718 157 FG----------------KFGQRPAFLLVACVPLASLVCVLWLKDRAVASPEAP---LA------------------RRA 199 (390)
T ss_pred HH----------------HhCHHHHHHHHHHHHHHHHHHHHHcCCCCcCccccc---hh------------------hHH
Confidence 88 455666668777777665555555554332111100 00 012
Q ss_pred ccccccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHH-HHHhhHHHHHHHhhc
Q 013453 274 PKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLL-VFQLSLYPFLERILG 352 (442)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 352 (442)
+.++++|+|.++......++..........+.+.|+.+ .|+++++.|......+.... ++.. ..+++.||++
T Consensus 200 ~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~------~G~s~~~ig~~~~~~~~~~~~~g~~-~~g~l~~r~g 272 (390)
T TIGR02718 200 SLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVD------AGWPLEWIGRLGMAGGAVTVLLGCG-GGAWLVRRAG 272 (390)
T ss_pred HHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHh------cCCCHHHHHHHHhHHHHHHHHHHHH-HHHHHHHHhh
Confidence 34567888888877777777666666666666655532 59999999999888776444 4455 7888888889
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhh-chhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCCh-hhhhHHHHHHHHHHHH
Q 013453 353 PIMVARIAGVLTIPLLTSYPYIAMLS-GFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQ-DQRGAANGIAMTGMSL 430 (442)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~ 430 (442)
+++....+..+..+............ ...... ......+.++......+.......+..++ +.+++.+++.+...++
T Consensus 273 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l 351 (390)
T TIGR02718 273 LWRTFILGVGLAGSLALLWFAQAAFWLAPGIAV-AWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDL 351 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHH
Confidence 99888776655533322222111110 111111 11111222222233334445554455555 8899999999999999
Q ss_pred HHhhhcccCCC
Q 013453 431 FKAAGPAGGGA 441 (442)
Q Consensus 431 g~~~gp~i~G~ 441 (442)
|..+||.++|+
T Consensus 352 g~~~g~~~~G~ 362 (390)
T TIGR02718 352 GELIASSIAGY 362 (390)
T ss_pred HHHHHHHHHHH
Confidence 99999999875
No 92
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.93 E-value=2.1e-24 Score=204.85 Aligned_cols=339 Identities=16% Similarity=0.116 Sum_probs=228.3
Q ss_pred hhhchh-HHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcc----cCCch-hhHHHHHHHHHHHHHHhc
Q 013453 58 SSLFPF-LYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR----YGRKP-VIIMGTASVVIFNTLFGL 131 (442)
Q Consensus 58 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr----~Grr~-~~~~~~~~~~i~~~~~~~ 131 (442)
....+. .+.+.+++|+++.+ .|++.++..+..++..|+.|+++|| +|||| .++.+....+++.+++..
T Consensus 16 ~~~~~~l~~~~~~~~g~s~~~------~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~ 89 (437)
T TIGR00792 16 AIVSTYLLFFYTDVLGLSAAF------VGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFT 89 (437)
T ss_pred HHHHHHHHHHHHHccCCCHHH------HHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHh
Confidence 334443 45667789999999 9999999999999999999999997 67755 566788888888887776
Q ss_pred cch------HHHHHHHHHHHHhhcchhhH-HHHHhhhhc-cccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCc
Q 013453 132 SVN------FWMAVLTRFLLGSLNGLLGP-IKAYACEIF-REEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNL 203 (442)
Q Consensus 132 a~~------~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~ 203 (442)
.++ ...+++.+++.+++.+...+ ..++..|.. +++||++..++.+.+..+|..+++.+.+.+....++..
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~-- 167 (437)
T TIGR00792 90 TPDFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGD-- 167 (437)
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc--
Confidence 653 45677788888888777655 588888887 56899999999999999998888777766654211000
Q ss_pred ccccccccCCcChhHHHHHHHHHHHHHH-HHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhcccccccccccccc
Q 013453 204 FSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNW 282 (442)
Q Consensus 204 ~gw~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (442)
...+|+..+.+.+++.++..+ ..+..||+++..++++++ +.+.....+++++||
T Consensus 168 -------~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~~~~------------------~~~~~~~~~~l~~~~ 222 (437)
T TIGR00792 168 -------DKFGWFMFALVLALIGVVSLIICFFGTKERYSEIPKNIEK------------------KLSLKQIFKALFKND 222 (437)
T ss_pred -------ccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCccccc------------------CCCHHHHHHHHhCCH
Confidence 034577766777776665543 445667654221110000 000112345678899
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHH
Q 013453 283 PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGV 362 (442)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (442)
.++...+..++..........+.+.|.. ..++ ++.+.+.+.....++.+++.+ +..++.||+++|+....+..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~~~~~~i~~ii~~~-~~~~l~~r~g~~~~~~~~~~ 295 (437)
T TIGR00792 223 QLLILCLAYLFYNLAFNIKNGVQVYYFT-----YVLG-DPELFSYMGSIAIVAGLIGVL-LFPRLVKKFGRKILFAGGIL 295 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHcchhheeEe-----eecC-ChHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCcHHHHHHHHH
Confidence 9888777776666555544333332222 1133 455667777777888888877 66778888899998888877
Q ss_pred HHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCC-------hhhhhHHHHHHHHHHHHHHhhh
Q 013453 363 LTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVD-------QDQRGAANGIAMTGMSLFKAAG 435 (442)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~~g~~~g 435 (442)
+..++...+.+.. . ..+. ..+...+.++......+..+++.+|..| ++.+|++.|+.++...+|..++
T Consensus 296 ~~~~~~~~~~~~~--~--~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg 370 (437)
T TIGR00792 296 LMVLGYLIFFFAG--S--NLPL-ILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALA 370 (437)
T ss_pred HHHHHHHHHHHcc--h--hHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHH
Confidence 7766655544422 1 1122 2222233333444455667777777654 5678999999999999999999
Q ss_pred cccCCC
Q 013453 436 PAGGGA 441 (442)
Q Consensus 436 p~i~G~ 441 (442)
+.+.|+
T Consensus 371 ~~i~g~ 376 (437)
T TIGR00792 371 GFLVGL 376 (437)
T ss_pred HHHHHH
Confidence 988775
No 93
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.93 E-value=5.4e-24 Score=205.90 Aligned_cols=334 Identities=16% Similarity=0.133 Sum_probs=228.3
Q ss_pred HHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhccchHHHHHHHHHHHHh
Q 013453 68 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGS 147 (442)
Q Consensus 68 ~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~r~l~G~ 147 (442)
.+.++.+... ..+..+++.+|..+|++++|+++||+|||++++.++++..++.++.++++|++.+++.|++.|+
T Consensus 110 ~~~~c~~~~~------~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~ 183 (521)
T KOG0255|consen 110 WNLVCDSSTL------VALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGF 183 (521)
T ss_pred hceeeCcHhH------HHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHh
Confidence 3455666666 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCcccccccccCCcChhHHHHHHHHH
Q 013453 148 LNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFA 226 (442)
Q Consensus 148 ~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~ 226 (442)
+.+.... ...+++|++++++|+.+..+ ......+..++++.++++.. +||+.+++..++.
T Consensus 184 ~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~------------------~Wr~~~~~~~~~~ 244 (521)
T KOG0255|consen 184 FGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR------------------DWRWLFWIISIPS 244 (521)
T ss_pred hccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh------------------hHHHHHHHHHHHH
Confidence 8666655 69999999999999999999 77777888888888888864 3566667777777
Q ss_pred HHHHHHHhhccccCCCCCCCCccchh--hhhhhhhh----hhh---h----h-h--h--hcccccccccccccchhHHHH
Q 013453 227 FGVTIAAFWLPETLHRHNDDDDSCDV--SYDALESA----SAE---V----K-E--E--EGREATPKKSLLKNWPLMSSI 288 (442)
Q Consensus 227 ~~~~~~~~~~~e~~~~~~~~~~~~~~--~~~~~~~~----~~~---~----~-~--~--~~~~~~~~~~~~~~~~~~~~~ 288 (442)
++.++.++..||+|++...+.+.++. ..++..+. .+. . . + . ..++...+.++++.|++....
T Consensus 245 ~~~~~~~~l~~Es~rwl~~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~ 324 (521)
T KOG0255|consen 245 GLFLLLWFLPPESPRWLLSKGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRT 324 (521)
T ss_pred HHHHHHHHccCcChHHHHHcCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHH
Confidence 77766666677999986554433222 11221110 000 0 0 0 0 111224467778887654444
Q ss_pred HHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHHHHHHHH
Q 013453 289 IVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLL 368 (442)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (442)
+...+..+.... .|+.......++|.+.. ......+........ ......++.|||.....+..+..+++
T Consensus 325 ~~~~~~~~~~~~------~y~gl~~~~~~lg~~~~---~~~~~~~~~~~p~~~-~~~~~~~~~gR~~~~~~~~~~~~~~~ 394 (521)
T KOG0255|consen 325 LYLLFIWFVFSL------VYYGLSLNVSGLGGNIY---LNFTLSGLVELPAYF-RNGLLLPEFGRRPPLFLSLFLAGIGL 394 (521)
T ss_pred HHHHHHHHHHhH------HHHhhhhhhhhcCchHH---HHHHHHHHHHhhHHH-HHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 333333211111 11111111122333322 233333334444444 44566677799999999999999998
Q ss_pred HHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhcccC
Q 013453 369 TSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGG 439 (442)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i~ 439 (442)
+...+....... +....+..+...+.. ......+.+.+|.+|+..|..+.+...+...+|++++|.+.
T Consensus 395 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~ 462 (521)
T KOG0255|consen 395 LLFGWLPDDLGG--WLHWILPLLGKFFIG-SAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFP 462 (521)
T ss_pred HHHHHhhccchh--HHHHHHHHHHHHHHH-HHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888877654321 122222222222233 33344588899999999999999999999999999998753
No 94
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.93 E-value=9.3e-23 Score=175.24 Aligned_cols=328 Identities=16% Similarity=0.081 Sum_probs=253.6
Q ss_pred cchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhccchH
Q 013453 56 PISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNF 135 (442)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a~~~ 135 (442)
....+.|.++.+.+|+|.+.+. .|++++...+...+.+++..+++.|+|.++.+..++++..++.++-... +.
T Consensus 27 ~itsvgPLL~~Ir~~~gls~s~------aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-~~ 99 (395)
T COG2807 27 AITSVGPLLDEIRQDLGLSFSV------AGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-GL 99 (395)
T ss_pred hhhhhhhhHHHHHHHhcccHHH------HHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-cH
Confidence 3467789999999999999999 9999999999999999999999999999999999999999999998887 78
Q ss_pred HHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCcccccccccCCc
Q 013453 136 WMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFP 214 (442)
Q Consensus 136 ~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~ 214 (442)
+.++.+-.+.|.|.+...+ .++++.+.+|+ +-+..++++.+..++|..+++.+.-.+.++ ..|||
T Consensus 100 ~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk-~~~~mtglYs~sl~~~aaLaa~lavpla~~------~~gW~------- 165 (395)
T COG2807 100 PLLFLGTLLAGAGIAVINVLLPSLIKRDFPK-RVGLMTGLYSTSLGAGAALAAALAVPLAQH------SGGWR------- 165 (395)
T ss_pred HHHHHHHHHHHhhHHHHHHhhhHHHHhhccc-chhhHHhHHHHHHHHHHHHHhhhhhHHHHh------hccHH-------
Confidence 8899999999999999998 59999999984 688999999999999999999999999872 12344
Q ss_pred ChhHHHHHHHHHHHHHHHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhcccccccccccccchhHHHHHHHHHH
Q 013453 215 YFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVF 294 (442)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (442)
.....-+.++++.++.++ |...+....+.+ ....+..+++|+|.-|...+.+.+.
T Consensus 166 --~aL~~WAl~allAl~~Wl--Pq~~r~~~~~~~---------------------~~~~~~~~vw~~~~aW~vtLfmGlq 220 (395)
T COG2807 166 --GALGFWALLALLALLIWL--PQALREQAASIA---------------------TKLVSVRKVWRSPLAWQVTLFMGLQ 220 (395)
T ss_pred --HHHHHHHHHHHHHHHHHh--hhcccccccccc---------------------cccccccccccCchhHHHHHHHHhh
Confidence 433555666665555443 442221111100 0122345689999999999999999
Q ss_pred HHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHH
Q 013453 295 SLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYI 374 (442)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (442)
+..++....++|.++.+ .|+|+.++|.+.+...+..+..++..-....|+.++|+..........++...+.+.
T Consensus 221 S~~~Y~~~~WLP~ili~------~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~ 294 (395)
T COG2807 221 SLLYYIVIGWLPAILID------RGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLA 294 (395)
T ss_pred HHHHHHHHHHHHHHHHH------cCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHh
Confidence 99999999999988875 499999999999999999999999444444445667777777777777776666654
Q ss_pred HHhhchhhHHHHHHHHHHHHHHHHHHHHhhhh-hhcccCChhhhhHHHHHHHHHHHHHHhhhcccCCCC
Q 013453 375 AMLSGFGLAFLLNCASVVKNLLSVSIITGLFI-LQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGAL 442 (442)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i~G~l 442 (442)
+.. ..+.+. +..+....+.++.... +..+..+++..++-.|+.+.++++-.+.||.+.|++
T Consensus 295 P~~---~~~lw~----~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~l 356 (395)
T COG2807 295 PGQ---LPILWA----LLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFL 356 (395)
T ss_pred hhh---HHHHHH----HHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHH
Confidence 432 222222 2222333444455444 344455678889999999999999999999999874
No 95
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.93 E-value=7.9e-30 Score=242.80 Aligned_cols=375 Identities=18% Similarity=0.209 Sum_probs=243.4
Q ss_pred HHHHHhHhcchhhchhHHHHH--HHhcccccchh---hhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHH
Q 013453 48 IIVLCTALPISSLFPFLYFMI--KDFQIAKREED---IGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (442)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~ 122 (442)
++.+..+++...+....+... .++..+..+.. .....+++.+...+|..+|+++.|.++||+|||+.++++.++.
T Consensus 7 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~ 86 (451)
T PF00083_consen 7 LGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLM 86 (451)
T ss_pred HHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhccccccccccccccccccccccccccc
Confidence 344666666666655554444 23333332211 2344789999999999999999999999999999999999999
Q ss_pred HHHHHHHhccc---hHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccc
Q 013453 123 VIFNTLFGLSV---NFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (442)
Q Consensus 123 ~i~~~~~~~a~---~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 198 (442)
.++.++.++++ +++.+.++|++.|++.|...+ ...++.|..|+++|++..++.+.+..+|..++..++..+.+.
T Consensus 87 ~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~-- 164 (451)
T PF00083_consen 87 IIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYY-- 164 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--
Confidence 99999999999 999999999999999988877 599999999999999999999999999999988887665431
Q ss_pred cCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhccccCCCCCCCCccchhh--hhhhhhhhh---hhhh------h
Q 013453 199 KYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVS--YDALESASA---EVKE------E 267 (442)
Q Consensus 199 ~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~--~~~~~~~~~---~~~~------~ 267 (442)
.+ .+.||..+.+..+++++..+...++||+|++...+++.++.. .++.++... +.++ +
T Consensus 165 -----~~------~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~ 233 (451)
T PF00083_consen 165 -----SD------NWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKE 233 (451)
T ss_pred -----cc------cccccccccccccccccccccccccccccceeccccccccccccccccccccccccccccccccccc
Confidence 11 234565557777777777777788999999865444333221 122111111 0000 0
Q ss_pred hcccccccccccccchh-HHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHH
Q 013453 268 EGREATPKKSLLKNWPL-MSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPF 346 (442)
Q Consensus 268 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (442)
.++.+..++++++++.. +...+...+..............| .+...++.+.+.. -.......+...++.+ .+.+
T Consensus 234 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~--~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~ 308 (451)
T PF00083_consen 234 SQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYY--SPSIFENAGISNS--FLATLILGLVNFLGTL-LAIF 308 (451)
T ss_pred ccccceeeeecccccccccccccccccccccccccccccccc--ccccccccccccc--cccccccccccccccc-cccc
Confidence 11111446777777542 222222222222211111111111 2223344555555 1222233444555554 5557
Q ss_pred HHHhhchhHHHHHHHHHHHHHHHHHH--HHHHhhch--hhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHH
Q 013453 347 LERILGPIMVARIAGVLTIPLLTSYP--YIAMLSGF--GLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANG 422 (442)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g 422 (442)
+.||+|||+....+.....++...+. ........ ..........+....+..+..+..+.+..|.+|++.|+++.|
T Consensus 309 ~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~ 388 (451)
T PF00083_consen 309 LIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIG 388 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccceeeeeccccccccccccccccccccccccccccccc
Confidence 88889999998888877777766554 11111110 122222222222333444667778889999999999999999
Q ss_pred HHHHHHHHHHhhhcccCC
Q 013453 423 IAMTGMSLFKAAGPAGGG 440 (442)
Q Consensus 423 ~~~~~~~~g~~~gp~i~G 440 (442)
+....++++++++|.+..
T Consensus 389 ~~~~~~~i~~~i~~~~~~ 406 (451)
T PF00083_consen 389 LSYAVGRIGGFIIPFLFP 406 (451)
T ss_pred cccccccccccccccccc
Confidence 999999999998887654
No 96
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.92 E-value=1.4e-22 Score=183.15 Aligned_cols=177 Identities=12% Similarity=0.101 Sum_probs=146.2
Q ss_pred HHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHH
Q 013453 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (442)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i 124 (442)
.+|+-.|+..+ +.......|.+.+++|+++++. .|.+.++++.++++++++.|+++||+|.|+++.++.+.+++
T Consensus 31 ~lC~fGF~~e~-R~n~s~a~p~L~~elglT~~qv-----~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl 104 (511)
T TIGR00806 31 YLCFYGFMAQF-RPGESFITPYLLTVLNFTEETV-----TNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVC 104 (511)
T ss_pred HHHHHHHHHHh-hchHHHHHHHHHHHcCCCHHHh-----cchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHH
Confidence 34444444333 4555567789999999998762 69999999999999999999999999999999999999999
Q ss_pred HHHHHhccchHHHHHHHHHHHHhhcchhhHHHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCcc
Q 013453 125 FNTLFGLSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLF 204 (442)
Q Consensus 125 ~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~ 204 (442)
.+++.++++++..+.+.|++.|++.|...+...++..|+|+++|+++.++..++..+|.++++++++++ . .+
T Consensus 105 ~t~L~~fa~Sl~~L~i~R~llGvaEA~~~A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll-~-------s~ 176 (511)
T TIGR00806 105 VWLLLLLGTSVWHMQLMEVFYSVTMAARIAYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLL-V-------TL 176 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-------hc
Confidence 999999999999999999999999998885599999999999999999999999999999999999994 3 45
Q ss_pred cccccccCCcChhHHHHHHHHHHHHHHHHhhccccCC
Q 013453 205 SSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLH 241 (442)
Q Consensus 205 gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 241 (442)
|||+. +...++......++++..+++|..++
T Consensus 177 gWr~y------~~Ln~Isl~s~~~a~~~a~~LP~~~~ 207 (511)
T TIGR00806 177 GWISY------STLNIISLVFMTFSVFLALFLKRPKR 207 (511)
T ss_pred CchhH------HHHHHHHHHHHHHHHHHHHhCCCCch
Confidence 66643 33344444444555666677885443
No 97
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.92 E-value=7.5e-22 Score=188.45 Aligned_cols=372 Identities=13% Similarity=0.054 Sum_probs=221.1
Q ss_pred hhHHHHHHHHHHhHhcchhhchhHHHH-HHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcc-cCCchhhHHH
Q 013453 41 TELFSIWIIVLCTALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPVIIMG 118 (442)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~~~~~ 118 (442)
+.++.++...+...+..+...+.++.+ .+++|.++.+ .+++.+.+........+++|+++|| +|||++++++
T Consensus 21 ~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~------a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g 94 (500)
T PRK09584 21 KAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEAD------SITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLG 94 (500)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHH
Confidence 446667777777777777777777655 4889999988 8888888776666667899999999 5999999999
Q ss_pred HHHHHHHHHHHhccc-hHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccc--hhhhhhhhhHhhhhHHHHHHHhhhhhc
Q 013453 119 TASVVIFNTLFGLSV-NFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEH--QALGLSTVSTAWGIGLIIGPALGGFLA 194 (442)
Q Consensus 119 ~~~~~i~~~~~~~a~-~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~--r~~~~~~~~~~~~~g~~~g~~~~~~l~ 194 (442)
.++..++..++++++ +.+.++++|+++|++.|...+ ..+++.|++|+++ |..++++++.+.++|..+||.+++++.
T Consensus 95 ~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~ 174 (500)
T PRK09584 95 AIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLA 174 (500)
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998874 566777889999999998877 5889999998653 456889999999999999999999998
Q ss_pred cccccCCCcccccccccCCcChhHHHHHHHHHHHHHH----HHhhccccCCCCCCC-Cccchhhh-----------hhhh
Q 013453 195 QPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTI----AAFWLPETLHRHNDD-DDSCDVSY-----------DALE 258 (442)
Q Consensus 195 ~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~e~~~~~~~~-~~~~~~~~-----------~~~~ 258 (442)
+ .+|| +..+.+.++..++..+ ....++|..+..+.+ .+..+... ....
T Consensus 175 ~-------~~g~---------~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (500)
T PRK09584 175 A-------KYGW---------SVAFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALIAIATWL 238 (500)
T ss_pred H-------hhCH---------HHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHHHHHHHHHH
Confidence 8 4444 4444555543333222 223344432111111 11111000 0000
Q ss_pred hhhhhhhh------------hhcccccccccccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcC----CcccCcccCCh
Q 013453 259 SASAEVKE------------EEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANS----PKKLGGLNYST 322 (442)
Q Consensus 259 ~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 322 (442)
....+... ..........+.-++ +.+..+... +....+.......+.++.. ....+..|+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~- 315 (500)
T PRK09584 239 LHNQEIARMALGVVALGIVVIFGKEAFAMKGAARR-KMIVAFILM-LEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIA- 315 (500)
T ss_pred HhcchHHHHHHHHHHHHHHHHHHHHHhhcCHHHHH-HHHHHHHHH-HHHHHHHHHHHHhccHHHHHHHHhccccccceE-
Confidence 00000000 000000001111122 222222111 2222222222222222111 0000011211
Q ss_pred hHHHHHHHHHHHHHHHHHhhHH---HHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhhc---hhhHHHHHHHHHHHHHH
Q 013453 323 QMVGEVLAITGFSLLVFQLSLY---PFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSG---FGLAFLLNCASVVKNLL 396 (442)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 396 (442)
...+.+.+.+.+..++..++.. +++.+|.+..+.+.+++++.++++..+.......+ .....+.....++.+.+
T Consensus 316 i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~g 395 (500)
T PRK09584 316 VEPEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIG 395 (500)
T ss_pred ECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHH
Confidence 1244555566666666555332 33334445556777888888888777665543211 11122455556666777
Q ss_pred HHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhcc
Q 013453 397 SVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPA 437 (442)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~ 437 (442)
.....|....++.+..|++.||+++|+......+|..++..
T Consensus 396 e~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~ 436 (500)
T PRK09584 396 ELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGY 436 (500)
T ss_pred HHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888999999999999999999999987666666555533
No 98
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.90 E-value=6.4e-21 Score=175.31 Aligned_cols=350 Identities=17% Similarity=0.236 Sum_probs=248.0
Q ss_pred HHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccC-CchhhHHHHHHHH
Q 013453 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG-RKPVIIMGTASVV 123 (442)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~G-rr~~~~~~~~~~~ 123 (442)
.+....++..+..+...|.++.+.++.|.|..| +|.+.+...+...++++++|.++||.+ +||.+.+..++.+
T Consensus 6 rLs~~~f~~f~~~G~~~p~~~~~L~~~G~s~~q------IG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~ 79 (400)
T PF03825_consen 6 RLSLMYFLYFFAYGAFLPYLPLYLESRGFSGTQ------IGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSA 79 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHH
Confidence 355566777777888899999999999999999 999999999999999999999999986 5788878888887
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhh-hhhccccccCC
Q 013453 124 IFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG-GFLAQPAEKYP 201 (442)
Q Consensus 124 i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~-~~l~~~~~~~~ 201 (442)
+........++++.+++.-++..+......| ..++..+... ++++-.|-.....++|.+++.... +.+..
T Consensus 80 ~~~~~~~~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~------ 151 (400)
T PF03825_consen 80 LALLLLAFSSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGG------ 151 (400)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHh------
Confidence 7777777888999888888888877666666 4666666655 456677878888888888775542 33332
Q ss_pred CcccccccccCCcChhHHHHHHHHHHHHHHHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhccccccccccccc
Q 013453 202 NLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKN 281 (442)
Q Consensus 202 ~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (442)
..++. .....+.+.+...++.....+.+|+.|++++.+++.++ ....+..+++|+
T Consensus 152 -~~~~~------~~~~~~~i~~~~~~ll~~~~l~lp~~~~~~~~~~~~~~------------------~~~~~~~~llk~ 206 (400)
T PF03825_consen 152 -YLGIS------GTSLIFYIAAILSLLLAGFALFLPKTPPKRSAKESVKK------------------LLGLDALKLLKN 206 (400)
T ss_pred -hhccc------cccHHHHHHHHHHHHHHHHHHhCCCCccccccCCCccc------------------ccchHHHHHhcC
Confidence 11111 11122344444444444444567877633222211111 112233578999
Q ss_pred chhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCccc-CChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHH
Q 013453 282 WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLN-YSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIA 360 (442)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (442)
|++...++..++.......+.++.+.|+.+ .| .+....+...++..++.++.-. ..+++-+|+|.++++.++
T Consensus 207 ~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~------~gg~~~~~~g~~~~l~~~aEi~~f~-~~~~~~~r~g~~~ll~~a 279 (400)
T PF03825_consen 207 PRFLVFLLAAFLIGISHAAYYTFFSIYLQE------LGGYSGSTIGILWALGVVAEIPFFF-FSGRFLKRFGIKWLLLLA 279 (400)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cccchhhHHHHHHHHHHHHHHHHHH-HHHHHHHhcCHHHHHHHH
Confidence 999888888888888888888888877654 34 6777788888877777777766 777788888999999999
Q ss_pred HHHHHHHHHHHHHHHHhhchhhHHHHHHH-HHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHH-HHHHHhhhccc
Q 013453 361 GVLTIPLLTSYPYIAMLSGFGLAFLLNCA-SVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTG-MSLFKAAGPAG 438 (442)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~-~~~g~~~gp~i 438 (442)
.+..++=..++.+..++ .......... ....+............++.+..|++.|++++++++.. ..+|..+|..+
T Consensus 280 ~~~~~vR~~l~a~~~~~--~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~i 357 (400)
T PF03825_consen 280 LVAYAVRWLLYAYFSDP--WPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLI 357 (400)
T ss_pred HHHHHHHHHHHHHhcCC--cHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHH
Confidence 88888887777665211 1111111222 23344444556677888999999999999999998876 46899999999
Q ss_pred CCCC
Q 013453 439 GGAL 442 (442)
Q Consensus 439 ~G~l 442 (442)
+|++
T Consensus 358 gG~l 361 (400)
T PF03825_consen 358 GGWL 361 (400)
T ss_pred HHHH
Confidence 8864
No 99
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.90 E-value=5.9e-21 Score=177.56 Aligned_cols=378 Identities=15% Similarity=0.130 Sum_probs=241.9
Q ss_pred ChhhHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhc----ccCCchh
Q 013453 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD----RYGRKPV 114 (442)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~d----r~Grr~~ 114 (442)
|.++++.+....+...+......+.++.+.+++|.+..+ .+++..+..+...+.+|+.|+++| |+||||.
T Consensus 2 ~~~~li~~~~~~~Giq~~~~l~~~~l~~yl~~lg~~~~~------~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp 75 (477)
T TIGR01301 2 PLRKLLRVASVAAGVQFGWALQLSLLTPYVQELGIPHAW------ASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRP 75 (477)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHH
Confidence 345667777777777778888888888899999999988 999999999999999999999999 5999999
Q ss_pred hHHH-HHHHHHHHHHHhccchHHH-----------------HHHHHHHHHhhcchhhH-HHHHhhhhccccch--hhhhh
Q 013453 115 IIMG-TASVVIFNTLFGLSVNFWM-----------------AVLTRFLLGSLNGLLGP-IKAYACEIFREEHQ--ALGLS 173 (442)
Q Consensus 115 ~~~~-~~~~~i~~~~~~~a~~~~~-----------------l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r--~~~~~ 173 (442)
++++ .....++.++.+++++... ++++-.+..++.....+ ..++++|.+|+++| +.+.+
T Consensus 76 ~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~ 155 (477)
T TIGR01301 76 FIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANA 155 (477)
T ss_pred HHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHH
Confidence 8875 6666677777777766432 22222333445554444 69999999998865 57899
Q ss_pred hhhHhhhhHHHHHHHhhhhhccccccCCCccccc-----ccccCCcChhHHHHHHHHHHHHH-HHHhhccccCCCCCCCC
Q 013453 174 TVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSE-----SLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDD 247 (442)
Q Consensus 174 ~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~-----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~ 247 (442)
+.+...++|.++|+.++++..... .+++. ... ..+++..|.+.++..++.. +..+..||.+...+++.
T Consensus 156 ~~~~~~~lG~ilg~~~g~~~~~~~-----~~~~~~~~~~~~~-~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~ 229 (477)
T TIGR01301 156 YFSFFMAIGNVLGYAAGAYSGLYK-----IFPFTKTEACGVS-CANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDF 229 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHH-----hcccccccccccc-cchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccc
Confidence 999999999999999998752100 11111 001 2356777787777666654 45677888764322111
Q ss_pred ccchhhhhhhhhhhhhhhhhhcccccccccccc-----cchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCCh
Q 013453 248 DSCDVSYDALESASAEVKEEEGREATPKKSLLK-----NWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYST 322 (442)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (442)
++ ++.++..+ .+.....+++++ .+.++..+++.++..+..+.+..+.+.|........+-+-+.
T Consensus 230 ~~-----~~~~~~~~------~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~ 298 (477)
T TIGR01301 230 IN-----SEAAPPSK------HGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGA 298 (477)
T ss_pred hh-----hhcccccc------cchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchh
Confidence 00 00000000 000111222222 245788888888877776666555555543221110000000
Q ss_pred --hH----HHHHHHHHHHHHHHHHhhHHHHHHHhhc-hhHHHHHHHHHHHHHHHHHHHHHHhhc---------------h
Q 013453 323 --QM----VGEVLAITGFSLLVFQLSLYPFLERILG-PIMVARIAGVLTIPLLTSYPYIAMLSG---------------F 380 (442)
Q Consensus 323 --~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~ 380 (442)
++ -.+....+.+...+.++ +...+.|++| ||+....+.++.++++....+.....+ .
T Consensus 299 ~y~~gvr~G~~~l~~~s~~~~i~s~-~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~ 377 (477)
T TIGR01301 299 KYDDGVRAGAFGLMLNSVVLGITSI-GMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPT 377 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcch
Confidence 01 12333444555556666 5666778887 467768887788888777765543211 0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCCh--hhhhHHHHHHHHHHHHHHhhhcccCC
Q 013453 381 GLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQ--DQRGAANGIAMTGMSLFKAAGPAGGG 440 (442)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~~~g~~~~~~~~g~~~gp~i~G 440 (442)
.......+.....+..........++++++..|+ +..|..+|+.|.+..+.+.+.....|
T Consensus 378 ~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g 439 (477)
T TIGR01301 378 GIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSG 439 (477)
T ss_pred hhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHH
Confidence 0012333444445556667778889999998884 56699999999999999888776554
No 100
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.90 E-value=2e-20 Score=174.70 Aligned_cols=374 Identities=13% Similarity=0.083 Sum_probs=220.4
Q ss_pred hhhHHHHHHHHHHhHhcchhhchhHHHHH-HHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhccc-CCchhhHH
Q 013453 40 ITELFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-GRKPVIIM 117 (442)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~~~~ 117 (442)
.+.++.++...+...+..+.....+|.+. +++|.++.+ .+.+.+.+.....++.+++|+++||+ ||||++++
T Consensus 8 p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~------a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~ili 81 (493)
T PRK15462 8 PRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNH------AYELFSAYCSLVYVTPILGGFLADKVLGNRMAVML 81 (493)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHH
Confidence 35566666677777777777777777664 568999988 99999999999999999999999999 99999999
Q ss_pred HHHHHHHHHHHHhccc-hHHHHHHHHHHHHhhcchhhH-HHHHhhhhcccc--chhhhhhhhhHhhhhHHHHHHHhhhhh
Q 013453 118 GTASVVIFNTLFGLSV-NFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREE--HQALGLSTVSTAWGIGLIIGPALGGFL 193 (442)
Q Consensus 118 ~~~~~~i~~~~~~~a~-~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~~~~~l 193 (442)
+.++..++.++.+... +...++++..+.++|.|...+ ..++++|.+|++ +|..++++.+...++|..++|.+.+++
T Consensus 82 G~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L 161 (493)
T PRK15462 82 GALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYA 161 (493)
T ss_pred HHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHH
Confidence 9999999987776543 223344444555566777767 588999999876 699999999999999999999999999
Q ss_pred ccccccCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhccccCCCC---CCCCccchhhhh--------------h
Q 013453 194 AQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRH---NDDDDSCDVSYD--------------A 256 (442)
Q Consensus 194 ~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~---~~~~~~~~~~~~--------------~ 256 (442)
.+ ..| |+..|.+.++..++.++..+..++...+. ++++.++++... .
T Consensus 162 ~~-------~~G---------w~~~F~iaaigm~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (493)
T PRK15462 162 QE-------EYS---------WAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPA 225 (493)
T ss_pred Hh-------hhC---------hHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHHHHHHHH
Confidence 87 344 44444555443333333322222111110 011110000000 0
Q ss_pred hhhh-hhhhh-h---------------hhcccccccccccccch--hHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCc
Q 013453 257 LESA-SAEVK-E---------------EEGREATPKKSLLKNWP--LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGG 317 (442)
Q Consensus 257 ~~~~-~~~~~-~---------------~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (442)
+... ..+.. . .....+.+ +.=|+|- +..+.+...++...+....+.+.+|.......+-
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~er~r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~ 303 (493)
T PRK15462 226 LITVLFWKEWSVYALIVATIIGLGVLAKIYRKAEN--QKQRKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDM 303 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--HHHHhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchh
Confidence 0000 00000 0 00000000 0001111 1222222333333333333444444443221121
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhc--h----hHHHHHHHHHHHHHHHHHHHHHHhh---chhhHHHHHH
Q 013453 318 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG--P----IMVARIAGVLTIPLLTSYPYIAMLS---GFGLAFLLNC 388 (442)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 388 (442)
+|++ ...+...+.+.+..++.+++....-.++.+ | ..-..+++++.++++..+.+..... +.....+++.
T Consensus 304 ~g~~-ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~ 382 (493)
T PRK15462 304 FGYT-VPTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVL 382 (493)
T ss_pred ccee-eCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHH
Confidence 3332 224455566666666666644443333211 1 1235567777777766665433221 1123334556
Q ss_pred HHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHH-HHHHhhhccc
Q 013453 389 ASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGM-SLFKAAGPAG 438 (442)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~-~~g~~~gp~i 438 (442)
..++...+.....|...+.+++..|++.+|..+|+..... .+|..++..+
T Consensus 383 ~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~ 433 (493)
T PRK15462 383 GLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVI 433 (493)
T ss_pred HHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666777888899999999999999999999999986643 5666555443
No 101
>PRK09669 putative symporter YagG; Provisional
Probab=99.88 E-value=6.2e-20 Score=174.03 Aligned_cols=356 Identities=15% Similarity=0.051 Sum_probs=218.0
Q ss_pred ChhhHHHHHHHHHHhHhcchhhch-hHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcc----cCCch
Q 013453 39 PITELFSIWIIVLCTALPISSLFP-FLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR----YGRKP 113 (442)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr----~Grr~ 113 (442)
++++.+.-.+..+........... ..+.+.+++|++..+ +|.+.++..+..++..|+.|+++|| +||||
T Consensus 7 ~~~~~~~yg~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~------~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrr 80 (444)
T PRK09669 7 TTKDKIGYGLGDTACNLVWQTVMLFLAYFYTDVFGLSAAI------MGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFR 80 (444)
T ss_pred cHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHcccceeeEeeecCCCCCCCcc
Confidence 344444333333333333333333 345667889999999 9999999999999999999999998 78755
Q ss_pred h-hHHHHHHHHHHHHHHhccch------HHHHHHHHHHHHhhcchh-hHHHHHhhhhc-cccchhhhhhhhhHhhhhHHH
Q 013453 114 V-IIMGTASVVIFNTLFGLSVN------FWMAVLTRFLLGSLNGLL-GPIKAYACEIF-REEHQALGLSTVSTAWGIGLI 184 (442)
Q Consensus 114 ~-~~~~~~~~~i~~~~~~~a~~------~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~ 184 (442)
. ++.+.+..++..++....++ +..+++..++.+.+.... .|..++.+|+. +++||.+..+.......+|..
T Consensus 81 p~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~ 160 (444)
T PRK09669 81 PYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGL 160 (444)
T ss_pred hhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 5 55677777777665544432 456666666777664444 44588999988 568899988888888888888
Q ss_pred HHHHhhhhhccccccCCCcccccccccCCcChhHHHHHHHHHHHHHH-HHhhccccCCCCCCCCccchhhhhhhhhhhhh
Q 013453 185 IGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAE 263 (442)
Q Consensus 185 ~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (442)
+++.+...+... ++.. .. +.+|+..+.+.+++.++..+ ..+..+|.++..+++ +
T Consensus 161 i~~~~~~pl~~~-------~~~~-~~-~~g~~~~~~i~~ii~~v~~~~~~~~~~e~~~~~~~~---~------------- 215 (444)
T PRK09669 161 IVSVIALPLVDI-------LGKG-DE-QKGYFYAMMVMGLLGVVLFFCCFFMTKERYTPEVDN---S------------- 215 (444)
T ss_pred HHHHHHHHHHHH-------hCCC-ch-hhhHHHHHHHHHHHHHHHHHHHhCCeEEecCCCCcC---C-------------
Confidence 888766655541 1111 01 34566666666666555433 334445542221100 0
Q ss_pred hhhhhcccccccccccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhH
Q 013453 264 VKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSL 343 (442)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (442)
.+.....++++|||.++...+..++............ .|+.... .+ ++...+.+.....+..+++.+ +
T Consensus 216 -----~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~-~y~~~~~----~~-~~~~~~~~~~~~~i~~ii~~~-~ 283 (444)
T PRK09669 216 -----SSVWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRGGAT-LYYVNYV----LL-RPDLATLFLVTGMIAGLFGAL-L 283 (444)
T ss_pred -----CCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhh-heeeeee----cC-CHHHHHHHHHHHHHHHHHHHH-H
Confidence 0012345667899998887776665544443333333 3333221 12 233334444444566666655 6
Q ss_pred HHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCC-------hhh
Q 013453 344 YPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVD-------QDQ 416 (442)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 416 (442)
..++.||+++|+....+.....+....+.+.. ....+. ..+..++.+.......+..+++++|..| .+.
T Consensus 284 ~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~ 359 (444)
T PRK09669 284 SERLLGKFDRVRAFKWTIVAFVILSALIFFIP---PSNVWL-IFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRL 359 (444)
T ss_pred HHHHHHHhChHHHHHHHHHHHHHHHHHHHHhC---cchHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCc
Confidence 66788888999888877655544333222221 112222 2333334445555666778888888775 234
Q ss_pred hhHHHHHHHHHHHHHHhhhcccCCC
Q 013453 417 RGAANGIAMTGMSLFKAAGPAGGGA 441 (442)
Q Consensus 417 ~g~~~g~~~~~~~~g~~~gp~i~G~ 441 (442)
.|...|+.+....+|.++||.+.|.
T Consensus 360 ~g~~~s~~~~~~klg~alg~~i~g~ 384 (444)
T PRK09669 360 DGLVFSTNLFAIKLGLAIGGAVVGW 384 (444)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5677899999999999999988775
No 102
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.88 E-value=2e-22 Score=166.35 Aligned_cols=357 Identities=13% Similarity=0.081 Sum_probs=232.8
Q ss_pred HHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcc-cCCchhhHHHHHHH
Q 013453 44 FSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPVIIMGTASV 122 (442)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~~~~~~~~~ 122 (442)
...++..|-+++++.........+.+|.+++.++ ..++.+.|.....+..+++|++.|| +|-|..-++-+...
T Consensus 47 v~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~ak------ftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv 120 (459)
T KOG4686|consen 47 VFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAK------FTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFV 120 (459)
T ss_pred HHHHHhcccceeecCCchhhhhhhhcccccceee------eeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHH
Confidence 3455555666667777777778888888998888 8999999999999999999999997 78888777777777
Q ss_pred HHHHHHHhc---cchHHHHHHHHHHHHhhcchhhHH-HHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccc
Q 013453 123 VIFNTLFGL---SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (442)
Q Consensus 123 ~i~~~~~~~---a~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 198 (442)
.++.++++. .+.+|++..+|++.|+|.-...++ +.+..-|+..||.+.++|+......+|+.+-..+.+++.+..+
T Consensus 121 ~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~ 200 (459)
T KOG4686|consen 121 FLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMG 200 (459)
T ss_pred HHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHH
Confidence 788877765 679999999999999987666665 8999999999999999999999999999988888888876332
Q ss_pred cCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhc--cccCCCCCCCCccchhhhhhhhhhhhhhhhhhcccccccc
Q 013453 199 KYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWL--PETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKK 276 (442)
Q Consensus 199 ~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (442)
.. ++-...- ..+- ...+....+...++....+ -|.+.+..-+.++. ...+..+....
T Consensus 201 ~~---~~~~ghT-~LG~--~l~~~~~tc~~slical~lg~~D~rAerilh~e~g---------------~~Ge~pkLtdv 259 (459)
T KOG4686|consen 201 RM---FPGVGHT-LLGL--WLCFEVKTCKQSLICALSLGLSDDRAERILHLEEG---------------FLGEEPKLTDV 259 (459)
T ss_pred Hh---cccchHH-HHHH--HHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhcC---------------cccCCcccccc
Confidence 11 1100000 0000 0011111111111111110 11110000000000 00001111112
Q ss_pred cccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHH
Q 013453 277 SLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMV 356 (442)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (442)
.-+ .|.+|...++++++....+-+.+.-+.+++ +++|+|+.+++.+.+.......+... +.+.+.|+.|++..
T Consensus 260 ~~f-~ppfw~~~iicv~yyva~fPFi~lg~~fF~-----~rfGlS~~~a~~i~s~vy~Isav~sp-vfg~i~Dk~G~n~~ 332 (459)
T KOG4686|consen 260 NTF-YPPFWVLVIICVLYYVAWFPFITLGPMFFQ-----KRFGLSAVSAGNILSTVYGISAVLSP-VFGAISDKYGFNLW 332 (459)
T ss_pred ccc-CccHHHHHHHHHHHHHHHHHHhhhhHHHHH-----HhhCCChhhccchhhhhhhhhhhhhh-hHHHhHhhhcceeh
Confidence 222 367888888888877766666555555544 45899999999998888887777777 56666777787665
Q ss_pred HHHHHHHH-HHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhh
Q 013453 357 ARIAGVLT-IPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAG 435 (442)
Q Consensus 357 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g 435 (442)
...+..+. ..+-..+.+. ...++....+.++ .........+..++.++|+++.|++.|.++.++++|-++.
T Consensus 333 wv~~a~~~tl~~H~~l~Ft----~lsPy~~m~~lGL----sysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i 404 (459)
T KOG4686|consen 333 WVASACILTLLGHSGLFFT----FLSPYTSMTFLGL----SYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFI 404 (459)
T ss_pred hHHHHHHHHHHHhhhHHhh----hccHHHHHHHHhh----hHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHH
Confidence 54443333 3332222221 1123333333333 3334444566777778899999999999999999999999
Q ss_pred cccCCCC
Q 013453 436 PAGGGAL 442 (442)
Q Consensus 436 p~i~G~l 442 (442)
|+++|.+
T Consensus 405 ~Iiag~i 411 (459)
T KOG4686|consen 405 PIIAGFI 411 (459)
T ss_pred hhhhhee
Confidence 9999864
No 103
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.87 E-value=7e-21 Score=180.24 Aligned_cols=367 Identities=12% Similarity=0.037 Sum_probs=229.6
Q ss_pred hhHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccC-----Cchhh
Q 013453 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG-----RKPVI 115 (442)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~G-----rr~~~ 115 (442)
..+..+....+..++.........|.+.+++|++.++ ++...+...+...+-.+ +|+++||++ ||+.+
T Consensus 26 ~~~~~~~~~y~~qGl~~l~~~~~~~~l~~~lg~s~~~------i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l 98 (468)
T TIGR00788 26 VVLAIGLQVLFVKGIAGLMRLPLSPMLTDDLGLDGAR------YQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYL 98 (468)
T ss_pred hHHHHHHHHHHHhhHHHHhhhhhhHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHH
Confidence 3445566677777877333345556677789999999 99999999999988666 999999998 77777
Q ss_pred HHHHHHH-HHHHHHHhccchHHHHH-HHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhh---hHhhhhHHHHHHHh
Q 013453 116 IMGTASV-VIFNTLFGLSVNFWMAV-LTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTV---STAWGIGLIIGPAL 189 (442)
Q Consensus 116 ~~~~~~~-~i~~~~~~~a~~~~~l~-~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~---~~~~~~g~~~g~~~ 189 (442)
+++.++. .+.....+..++..... +.+++.+++.+...+ +.++..|..+ +++....+.. ....++|.++|+.+
T Consensus 99 ~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l 177 (468)
T TIGR00788 99 VLSGLLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLL 177 (468)
T ss_pred HHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHH
Confidence 8877666 34444444445544444 478899999888877 5999999998 5554433333 33445899999999
Q ss_pred hhhhccccccCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhccccCCCCCCCCccchh-hhhhhhhhhhhhhhhh
Q 013453 190 GGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDV-SYDALESASAEVKEEE 268 (442)
Q Consensus 190 ~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 268 (442)
+|.+.+ ..+|+..+.+.+.+.++..+...+++|++.....+.++.+. ........ ..+..
T Consensus 178 ~G~l~~----------------~~~~~~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 238 (468)
T TIGR00788 178 GGPLLD----------------KTLTRILFLITAALLLLQLFVSNLSKERRAFVRPRIGTYLEMNMALLTLG---VLANV 238 (468)
T ss_pred HHHHHH----------------hcCcchHHHHHHHHHHHHHHHHHhcccccccccccccccchhhhhhhhhh---HHHHH
Confidence 999988 34455555777766666655567788864211111100000 00000000 00000
Q ss_pred cccccccccccccchhHHHHHHHHH-HHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHH
Q 013453 269 GREATPKKSLLKNWPLMSSIIVYCV-FSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFL 347 (442)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (442)
++.....++.+++|.++...+..++ +... .+. ..+.++. ..+..|+++.+.|......+++.+++.....++
T Consensus 239 ~~~~~~l~~~l~~~~i~~~l~fifl~~~~~-~~~--~~~~f~~---~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~- 311 (468)
T TIGR00788 239 KVQILGLRGAIQLLEIAKPLIFIFLSYANL-PGA--SGSVFCA---TTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRF- 311 (468)
T ss_pred HHHHHHHHHHHhcHHHHHHHHHHHHHHhhc-CCC--CceeEEE---EcccCCCCcchhhhHHHHHHHHHHHHHHHHHHH-
Confidence 0111233445677887765554444 2211 111 1111111 123589999999999999999999998855554
Q ss_pred HHhhchhHHHHHHHHHHHHHHHHHHHHHHhhc----hhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHH
Q 013453 348 ERILGPIMVARIAGVLTIPLLTSYPYIAMLSG----FGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGI 423 (442)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 423 (442)
.+|++.|+.+.++.++..++...........+ ......+.....+..............++.+..|++.+|+..++
T Consensus 312 ~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al 391 (468)
T TIGR00788 312 LKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFAL 391 (468)
T ss_pred HhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHH
Confidence 56778888888887777766543221110000 01111122222233333334445567888889999999999999
Q ss_pred HHHHHHHHHhhhcccCCC
Q 013453 424 AMTGMSLFKAAGPAGGGA 441 (442)
Q Consensus 424 ~~~~~~~g~~~gp~i~G~ 441 (442)
.+++.++|..+++.++|.
T Consensus 392 ~~s~~~lg~~v~~~~gg~ 409 (468)
T TIGR00788 392 LASILHLGSSVSGFLGVL 409 (468)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999987664
No 104
>PTZ00207 hypothetical protein; Provisional
Probab=99.86 E-value=1.9e-19 Score=170.85 Aligned_cols=128 Identities=13% Similarity=0.158 Sum_probs=109.6
Q ss_pred hhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhcc-----
Q 013453 58 SSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS----- 132 (442)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a----- 132 (442)
+......|.+.+++|++..+ .+++.++. .....++++.|++.||+|||+++.++.+++.++.++++++
T Consensus 44 y~fsv~s~~L~~~lgls~~~------l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i 116 (591)
T PTZ00207 44 YAFNLISGAMQARYNLTQRD------LSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVI 116 (591)
T ss_pred HHHHHHHHHHHHHhCcCHHH------HHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 34556678999999999998 88888774 4456788889999999999999999999999999999987
Q ss_pred -chHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHH-HHHhhhhh
Q 013453 133 -VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLII-GPALGGFL 193 (442)
Q Consensus 133 -~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~-g~~~~~~l 193 (442)
++++.+++.|++.|+|.+...+ +...+.+++| ++||++.|+...+.++|.++ +++..+++
T Consensus 117 ~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~ 179 (591)
T PTZ00207 117 EGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFF 179 (591)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6899999999999999888777 5888899987 78999999999999999975 55544444
No 105
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.86 E-value=1.3e-19 Score=172.95 Aligned_cols=362 Identities=12% Similarity=0.074 Sum_probs=220.8
Q ss_pred hhHHHHHHHHHHhHhcchhhchhHH-HHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhc----ccCCc-hh
Q 013453 41 TELFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD----RYGRK-PV 114 (442)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~d----r~Grr-~~ 114 (442)
+..+.-.+..+...+......+.++ .+.+.+|++... +|.+..+..+.-++..|+.|.++| |+||| +.
T Consensus 6 ~~~~~yg~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~------vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~ 79 (473)
T PRK10429 6 TTKLSYGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGL------VGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPW 79 (473)
T ss_pred hHHHhhccchhHHhHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchh
Confidence 3333344444555555555566554 445667999999 999999999999999999999999 66984 55
Q ss_pred hHHHHHHHHHHHHHHhccc------hHHHHHHHHHHHHhhcchhhH-HHHHhhhhc-cccchhhhhhhhhHhhhhHHHHH
Q 013453 115 IIMGTASVVIFNTLFGLSV------NFWMAVLTRFLLGSLNGLLGP-IKAYACEIF-REEHQALGLSTVSTAWGIGLIIG 186 (442)
Q Consensus 115 ~~~~~~~~~i~~~~~~~a~------~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g 186 (442)
++++.+..+++..++...+ .+..+++..++.+++.....+ ..++..|.. +++||.+..+......++|..+.
T Consensus 80 il~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~ 159 (473)
T PRK10429 80 ILIGTLANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVT 159 (473)
T ss_pred HhhhhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5667777777765554433 134555666677777666655 588999998 58999999988777777776666
Q ss_pred HHhhhhhccccccCCCcccccccccCCcChhHHHHHHHHHHHHH-HHHhhccccCCCCCCCCccchhhhhhhhhhhhhhh
Q 013453 187 PALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVK 265 (442)
Q Consensus 187 ~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (442)
+.+...+.+ .+|.... ..+|+....+.+++.++.. +..+..||.++....+.++++
T Consensus 160 ~~~~~~~~~-------~~g~~~~--~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~-------------- 216 (473)
T PRK10429 160 AGFTLPFVN-------YVGGGDR--GFGFQMFTLVLIAFFIVSTIITLRNVHEVYSSDNQVSAEGS-------------- 216 (473)
T ss_pred HHHHHHHHH-------HhCCCch--hhhHHHHHHHHHHHHHHHHHHHHcCceecCCcccccccccc--------------
Confidence 665554433 1111100 2245555455555544433 334446665322111100000
Q ss_pred hhhcccccccccccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHH
Q 013453 266 EEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYP 345 (442)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (442)
+.+.+...+.+++||.++..++..++............+ |+.... .+ +....+.+.....++.+++.+ +..
T Consensus 217 --~~~~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~-y~~~y~----~~-~~~~~~~~~~~~~i~~ii~~~-~~~ 287 (473)
T PRK10429 217 --HLTLKDIVALIYKNDQLSCLLGMALAYNIASNIINGFAI-YYFTYV----IG-DADLFPYYLSYAGAANLVTLI-LFP 287 (473)
T ss_pred --CCCHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhhee-eEEEEE----CC-CHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 001112334567888888777777666655444444433 322211 22 455566666666677888776 667
Q ss_pred HHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCC-------hhhhh
Q 013453 346 FLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVD-------QDQRG 418 (442)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~g 418 (442)
++.||+|+|+.+..+..+..++...+...........+. ..+...+.+...........++.+|..| .+..|
T Consensus 288 ~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G 366 (473)
T PRK10429 288 RLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALL-IVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCES 366 (473)
T ss_pred HHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchh
Confidence 788899999998877766555544433221111112222 2233333444445556667778888765 34456
Q ss_pred HHHHHHHHHHHHHHhhhcccCCC
Q 013453 419 AANGIAMTGMSLFKAAGPAGGGA 441 (442)
Q Consensus 419 ~~~g~~~~~~~~g~~~gp~i~G~ 441 (442)
...|.......++.++++.+.|+
T Consensus 367 ~~~s~~~~~~K~~~al~~~i~g~ 389 (473)
T PRK10429 367 IAYSVQTMVVKGGSAFAAFFIGV 389 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 68999999999999999988775
No 106
>PRK09848 glucuronide transporter; Provisional
Probab=99.85 E-value=1.4e-18 Score=165.15 Aligned_cols=351 Identities=17% Similarity=0.111 Sum_probs=207.2
Q ss_pred ChhhHHHHHHHHHHhHhcchhhchhH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhccc----CCch
Q 013453 39 PITELFSIWIIVLCTALPISSLFPFL-YFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY----GRKP 113 (442)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~----Grr~ 113 (442)
+++..+.-.+..+...+......+.+ +.+.+.+|++..+ +|.+.+...+..++..++.|+++||. ||||
T Consensus 6 ~~~~~~~yg~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~------~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~ 79 (448)
T PRK09848 6 SWRTIVGYSLGDVANNFAFAMGALFLLSYYTDVAGVGAAA------AGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFR 79 (448)
T ss_pred cHHHHHhhccchHHhHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHhhhhheeeeecCCCCCcCch
Confidence 44444444455555555555555555 4555667999999 99999999999999999999999996 7777
Q ss_pred hh-HHHHHHHHHHHHHH-hc----cc--hHHHHHHHHHHHHhhcchhhH-HHHHhhhhcc-ccchhhhhhhhhHhhh---
Q 013453 114 VI-IMGTASVVIFNTLF-GL----SV--NFWMAVLTRFLLGSLNGLLGP-IKAYACEIFR-EEHQALGLSTVSTAWG--- 180 (442)
Q Consensus 114 ~~-~~~~~~~~i~~~~~-~~----a~--~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~-~~~r~~~~~~~~~~~~--- 180 (442)
.. .++.+...+...+. .. .+ .....++..++.+++.+...+ ..++..|..+ +++|.+..+.-..+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~ 159 (448)
T PRK09848 80 PFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTF 159 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHH
Confidence 55 55555444444332 21 11 223344555677777777765 4677776664 4678877665554433
Q ss_pred --hHHHHHHHhhhhhccccccCCCcccccccccCCcChhHHHHHHHHHHHH-HHHHhhccccCCCCCCCCccchhhhhhh
Q 013453 181 --IGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDAL 257 (442)
Q Consensus 181 --~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~ 257 (442)
++..++|.+++..... . ...|.....+.++++++. ++.....||+++.+.++ ..
T Consensus 160 ~~~~~~~~p~i~~~~g~~-------~-------~~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~~~~~----~~----- 216 (448)
T PRK09848 160 VCLAFLIGPSIKNSSPEE-------M-------VSVYHFWTIVLAIAGMVLYFICFKSTRENVVRIVAQ----PS----- 216 (448)
T ss_pred HHHHHHHHHHHHHhCCCc-------h-------hhhHHHHHHHHHHHHHHHHHHHHcCcEeccCCCccC----CC-----
Confidence 4455566555433210 0 001111112222222222 22333455543221110 00
Q ss_pred hhhhhhhhhhhcccccccccccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHH
Q 013453 258 ESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLL 337 (442)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (442)
....+++++|||.++...+..++............+.|... .+|.++...++......++.+
T Consensus 217 -------------~~~~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~~~~~~~~~~~~ 278 (448)
T PRK09848 217 -------------LKISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRY-----VLNDTGLFTVLVLVQNLVGTV 278 (448)
T ss_pred -------------HHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEee-----ecCChHHHHHHHHHHHHHHHH
Confidence 11235668899999888777777666666555444444332 256565555544444455666
Q ss_pred HHHhhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChh--
Q 013453 338 VFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQD-- 415 (442)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 415 (442)
++.+ ...++.||+++++.+.++..+..++...+.+.. ....+. ......+.+.+.....+...++..+..|.+
T Consensus 279 ~~~~-l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~---~~~~~~-~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~ 353 (448)
T PRK09848 279 ASAP-LVPGMVARIGKKNTFLIGALLGTCGYLLFFWVS---VWSLPV-ALVALAIASIGQGVTMTVMWALEADTVEYGEY 353 (448)
T ss_pred HHHH-HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcC---chhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHH
Confidence 6666 666777888999998888877776655554321 112222 222223333444455566777777777644
Q ss_pred -----hhhHHHHHHHHHHHHHHhhhcccCCC
Q 013453 416 -----QRGAANGIAMTGMSLFKAAGPAGGGA 441 (442)
Q Consensus 416 -----~~g~~~g~~~~~~~~g~~~gp~i~G~ 441 (442)
.+|...|+.+....+|.++|+.+.|.
T Consensus 354 ~~g~r~~G~~~~~~~~~~klg~aig~~i~g~ 384 (448)
T PRK09848 354 LTGVRIEGLTYSLFSFTRKCGQAIGGSIPAF 384 (448)
T ss_pred hhCccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45999999999999999999887664
No 107
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.84 E-value=1.4e-19 Score=170.71 Aligned_cols=335 Identities=14% Similarity=0.110 Sum_probs=237.0
Q ss_pred hhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhc----ccCCchhhH-HHHHHHHHHHHHHhcc-c--
Q 013453 62 PFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD----RYGRKPVII-MGTASVVIFNTLFGLS-V-- 133 (442)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~d----r~Grr~~~~-~~~~~~~i~~~~~~~a-~-- 133 (442)
...+.+.+.+|+++.. .|.+..+..+-.++..|+.|.++| |+||||..+ ++.+..+++.+++... +
T Consensus 23 ~~~~f~~~~~gl~~~~------~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~ 96 (428)
T PF13347_consen 23 YLLYFYTDVLGLSPAL------AGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAG 96 (428)
T ss_pred HHHHHHHHHcCCCHHH------HHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccch
Confidence 3446677788999998 999999999999999999999999 899776655 6778888888777765 4
Q ss_pred -----hHHHHHHHHHHHHhhcchhhH-HHHHhhhhcc-ccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCcccc
Q 013453 134 -----NFWMAVLTRFLLGSLNGLLGP-IKAYACEIFR-EEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSS 206 (442)
Q Consensus 134 -----~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw 206 (442)
....+++..++..++...... ..++..|..+ ++||.+..+.-..+..+|..+...+.+.+.+.. |.
T Consensus 97 ~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~-------g~ 169 (428)
T PF13347_consen 97 LSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWF-------GG 169 (428)
T ss_pred hhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhh-------cc
Confidence 234456677777887666655 5899999997 578999999999999999987777777777522 21
Q ss_pred cccccCCcChhHHHHHHHHHHHHH-HHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhcccccccccccccchhH
Q 013453 207 ESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLM 285 (442)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (442)
... ..+|+....+.+++.++.. +..+..+|.++..++++ ++.+.++..+++++||.++
T Consensus 170 ~~~--~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~~~-------------------~~~~~~~~~~~~~~nr~~~ 228 (428)
T PF13347_consen 170 GDT--SNGYRWMALVLAIVGLVFFLITFFFVKERSVEVTEQE-------------------KKISLRDSLRSLFRNRPFR 228 (428)
T ss_pred Ccc--chHHHHHHHHHHHHHHHHhhhhhheeeeccccccccc-------------------cccccccchhhhcccchHH
Confidence 110 1256666676666666654 44566677211111111 0112345578889999999
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHHHHH
Q 013453 286 SSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTI 365 (442)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (442)
...+..++............+.|.... .+.+ ...+.+.....++.+++.+ +..++.||+|+|+....+..+.+
T Consensus 229 ~l~~~~~~~~~~~~~~~~~~~y~~~~v-----l~~~-~~~~~~~~~~~~~~~v~~~-~~~~l~~r~gk~~~~~~~~~~~~ 301 (428)
T PF13347_consen 229 ILLLAFFLQWLAFALMNTFLPYYFTYV-----LGNE-GLISIFMLIFFVASIVGSP-LWGRLSKRFGKKKVYIIGLLLAA 301 (428)
T ss_pred HHHHHHHHHHhhhhhhhhHHHHHHHHH-----hcCc-hhhHHHHHHHHHHHHHHHH-HHHHHHHHccceeehhhhHHHHH
Confidence 888888887777766666665554433 2333 4556666677778888777 77889999999999999999988
Q ss_pred HHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCCh-------hhhhHHHHHHHHHHHHHHhhhccc
Q 013453 366 PLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQ-------DQRGAANGIAMTGMSLFKAAGPAG 438 (442)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~g~~~g~~~~~~~~g~~~gp~i 438 (442)
++.+++.+... .......+...+.+...........++.+|..+. ++.|...|+.+....++..+++.+
T Consensus 302 ~~~~~~~~~~~----~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i 377 (428)
T PF13347_consen 302 LGFLLLFFLGP----GSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAI 377 (428)
T ss_pred HHHHHHHHHHh----hhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHH
Confidence 88877766542 1222233334444445555667778888887763 446899999999999999999887
Q ss_pred CCC
Q 013453 439 GGA 441 (442)
Q Consensus 439 ~G~ 441 (442)
.|.
T Consensus 378 ~g~ 380 (428)
T PF13347_consen 378 VGL 380 (428)
T ss_pred HHH
Confidence 664
No 108
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.84 E-value=9.7e-19 Score=157.74 Aligned_cols=353 Identities=14% Similarity=0.148 Sum_probs=222.2
Q ss_pred hhHHHHHHHHHHhHhcchhhchhHHHHHHH-hcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHH
Q 013453 41 TELFSIWIIVLCTALPISSLFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (442)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~ 119 (442)
+..+......+...+..+...|..+...++ .|++.++ +|.+.++..+...+.+|+.|.++||.|.||-++..+
T Consensus 7 ~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~------iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i 80 (412)
T PF01306_consen 7 KNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTE------IGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFI 80 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHH------HHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHH------HHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHH
Confidence 456666777777777888889999888875 8999999 999999999999999999999999999777655443
Q ss_pred HHHH--HHHH-HHhccc----hHH-HHHHHHHHHHhhcchhhHH-HHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhh
Q 013453 120 ASVV--IFNT-LFGLSV----NFW-MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG 190 (442)
Q Consensus 120 ~~~~--i~~~-~~~~a~----~~~-~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 190 (442)
.... .+.+ ...+.| |.+ ..+++-+..|+......|+ -+++.+.. ++.+.-.|-..+..++|.+++..++
T Consensus 81 ~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~ 158 (412)
T PF01306_consen 81 AILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLA 158 (412)
T ss_dssp HHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHh
Confidence 3222 2222 222222 221 2222222333333333342 44444443 3455667888889999999999999
Q ss_pred hhhccccccCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhc-cccCCCCCCCCccchhhhhhhhhhhhhhhhhhc
Q 013453 191 GFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWL-PETLHRHNDDDDSCDVSYDALESASAEVKEEEG 269 (442)
Q Consensus 191 ~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (442)
|.+.+.. -...+++....+++..++.... |+.++..+..+....+. ++
T Consensus 159 G~L~~i~-----------------p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~~~~~--------------~~ 207 (412)
T PF01306_consen 159 GILFNIN-----------------PNIIFWIASAAAIILLLLLLLLKPDVPPQAEVADALGAKK--------------DK 207 (412)
T ss_dssp HHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTTSSS------------------
T ss_pred heeeeeC-----------------ccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhcccccCC--------------CC
Confidence 9998621 1233344444444444333333 33332211111100000 01
Q ss_pred ccccccccccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHH
Q 013453 270 REATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLER 349 (442)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (442)
...+...+++|+|++|...+........+..+...++.|..... ++.+.+....|++.+..-+..++.-. ..+++.+
T Consensus 208 ~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f--~~~~~g~~~~G~l~s~~v~~E~~~m~-~~p~li~ 284 (412)
T PF01306_consen 208 VSLKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFF--QSAGQGNQMYGYLWSVQVFLEALMMF-FSPWLIN 284 (412)
T ss_dssp --HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS--SSHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH
T ss_pred CcHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cccccChhHHhHHHHHHHHHHHHHHH-HHHHHHH
Confidence 11223567899999998887766666666677666777765432 22355677799999987777777766 8888999
Q ss_pred hhchhHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHH-HHHH
Q 013453 350 ILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIA-MTGM 428 (442)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~-~~~~ 428 (442)
|+|.|+.+.++..+..+=.....+.++ .+ .+...-.+.+.-.........-++++.+|++..++...+. +...
T Consensus 285 rig~k~~Lllag~i~~iRi~~~~~~~~-----~~-~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~ 358 (412)
T PF01306_consen 285 RIGAKNLLLLAGVIMAIRIIGSGFATN-----PW-VISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAK 358 (412)
T ss_dssp HH-HHHHHHHHHHHHHHHHHHHHT--S-----HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTH
T ss_pred hcChHhHHHHHHHHHHHHHHHHhhhcc-----hH-HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHH
Confidence 999999999998888888777666432 22 2444444444444455556677888889999999999986 6777
Q ss_pred HHHHhhhcccCCC
Q 013453 429 SLFKAAGPAGGGA 441 (442)
Q Consensus 429 ~~g~~~gp~i~G~ 441 (442)
++|.++.+.++|.
T Consensus 359 ~~~~~i~s~~~G~ 371 (412)
T PF01306_consen 359 QIGIIILSPLAGY 371 (412)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHhhhHHh
Confidence 8898888887774
No 109
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.83 E-value=1.6e-18 Score=155.16 Aligned_cols=277 Identities=15% Similarity=0.109 Sum_probs=188.4
Q ss_pred ccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCC-cccccc
Q 013453 131 LSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPN-LFSSES 208 (442)
Q Consensus 131 ~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~-~~gw~~ 208 (442)
...+++.++++-++.|.|.+...+ ++.++++..++|++.+.+++.+..+++|..++|.+++.+......... ..+-..
T Consensus 6 ~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~ 85 (310)
T TIGR01272 6 SQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATAN 85 (310)
T ss_pred HhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhh
Confidence 457899999999999999999988 599999999999999999999999999999999999998842110000 000000
Q ss_pred cccCCcChhHHHHHHHHHHHHHHHHhhc--cccCCCCCCCCccchhhhhhhhhhhhhhhhhhcccccccccccccchhHH
Q 013453 209 LFGKFPYFLPCLCISLFAFGVTIAAFWL--PETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMS 286 (442)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (442)
.. ...|+.++.+.+...++..+.+.+. ||.++++.+ + ... + +....++.+++|.++.
T Consensus 86 ~~-~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~~~~--~--~~~--------------~--~~~~~~~~~~~~~~~l 144 (310)
T TIGR01272 86 AE-AAKVHTPYLLLAGALAVLAIIFAFLPLPELQEADVA--R--VSS--------------G--DTTQKTSAFQFTHLVL 144 (310)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHccCCCCCccccc--c--ccc--------------c--cccchhhHHhhHHHHH
Confidence 00 1346666665554444443333333 442211100 0 000 0 0011234677888888
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHHHHHH
Q 013453 287 SIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIP 366 (442)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (442)
..+..+++.....+..++.+.|+.++ +.+|+++.+.+...+....+.+++++ +..++.+|+++++.+.++..+..+
T Consensus 145 ~~~~~f~yvg~e~~~~~w~~~yl~~~---~~~g~s~~~a~~~~s~~~~~~~iGr~-~~~~l~~r~g~~~~l~~~~~l~~~ 220 (310)
T TIGR01272 145 GALGIFVYVGAEVSAGSFLVNFLSDP---HALGLPEDQAAHFTAYTWGGAMVGRF-IGSAVMPMISQGRYLAFNAFLAVL 220 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc---ccCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCHHHHHHHHHHHHHH
Confidence 88888888888889999999998643 23689999999999999999999998 777788888988888877776666
Q ss_pred HHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhcccCCC
Q 013453 367 LLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGA 441 (442)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i~G~ 441 (442)
+..+..... . ... . ......+++....+|...+...+..|+ +.+++.++. ....+|++++|.+.|.
T Consensus 221 ~~~l~~~~~---~--~~~-~-~~~~l~g~~~s~i~P~~~s~a~~~~~~-~~~~asai~-~~~~~Gg~i~P~l~G~ 286 (310)
T TIGR01272 221 LSIGAALTH---G--YVA-M-WFVLALGLFNSIMFPTIFSLALNALGR-HTSQGSGIL-CLAIVGGAIVPLLQGS 286 (310)
T ss_pred HHHHHHHcC---C--HHH-H-HHHHHHHHHHHHHHHHHHHHHHhhhhh-hhhhhHHHH-HHHHhcchHHHHHHHH
Confidence 654333221 1 111 1 122234456667788888888777774 466777775 5677999999988775
No 110
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.83 E-value=1.7e-19 Score=164.34 Aligned_cols=202 Identities=16% Similarity=0.213 Sum_probs=162.8
Q ss_pred CCCCCCChhhHHHHHHHHHHhHhcchhhchhHHHHHHH--hcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccC
Q 013453 33 DTKSGLPITELFSIWIIVLCTALPISSLFPFLYFMIKD--FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG 110 (442)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~G 110 (442)
.+.++.+||.++...+..++.....+.+.+..-.+.++ .+.+.+. .|++.++..++.+++++.+|+++.|.+
T Consensus 26 ~~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~f------fG~viaa~slg~~i~~liF~~Ws~k~~ 99 (488)
T KOG2325|consen 26 LDERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATF------FGLVIAASSLGHAIFSLIFGIWSNKTG 99 (488)
T ss_pred ccccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcch------hhHHHHHHHHHHHhcchhhcccccccC
Confidence 33445678888899999999999999999988777777 4555555 999999999999999999999999998
Q ss_pred C-chhhHHHHHHHHHHHHHH-hc---cc-hHHHHHHHHHHHHhhcchhhHHHHHhhhhccccchhhhhhhhhHhhhhHHH
Q 013453 111 R-KPVIIMGTASVVIFNTLF-GL---SV-NFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLI 184 (442)
Q Consensus 111 r-r~~~~~~~~~~~i~~~~~-~~---a~-~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ 184 (442)
. |+.++.+.++..+++++. ++ .+ .-+.++++|++.|+|.|......+|+++....++|.++++....+..+|..
T Consensus 100 ~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~i 179 (488)
T KOG2325|consen 100 SVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGII 179 (488)
T ss_pred CcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHH
Confidence 7 999999999999999988 33 33 678999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhccccccCCCcccccccc--cCCcChhHHHHHHHHHHHHHH-HHhhccccCCCCCC
Q 013453 185 IGPALGGFLAQPAEKYPNLFSSESLF--GKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHND 245 (442)
Q Consensus 185 ~g~~~~~~l~~~~~~~~~~~gw~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~ 245 (442)
+||.++..+.... .-|++... ...-|-.+.++.+++.++.++ +.++++|.++...+
T Consensus 180 lGp~~q~~f~~Lg-----~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~ 238 (488)
T KOG2325|consen 180 LGPTIQLAFTPLG-----EKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGIID 238 (488)
T ss_pred HhHHHHHHHhhhc-----CCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCccc
Confidence 9999988876532 22332221 022356677888888877654 45667787665433
No 111
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.82 E-value=2.6e-17 Score=154.43 Aligned_cols=333 Identities=17% Similarity=0.133 Sum_probs=229.5
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHH-HHHHHHHHHHHhcc-ch-HHHHHHHHHHHHhhcchhhH-HH
Q 013453 81 GSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG-TASVVIFNTLFGLS-VN-FWMAVLTRFLLGSLNGLLGP-IK 156 (442)
Q Consensus 81 ~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~-~~~~~i~~~~~~~a-~~-~~~l~~~r~l~G~~~g~~~~-~~ 156 (442)
+.+.++..++..+..++..|+.|.++|+-|+||.++.. ..+..+.+.+..+. ++ ++...+.-++.-++.+...+ ..
T Consensus 69 ~s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyn 148 (477)
T PF11700_consen 69 SSLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYN 148 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34467889999999999999999999999977666554 45555566666653 43 44344444444456666666 48
Q ss_pred HHhhhhccccch--------------------------hhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCcccccccc
Q 013453 157 AYACEIFREEHQ--------------------------ALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLF 210 (442)
Q Consensus 157 ~~i~~~~~~~~r--------------------------~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~ 210 (442)
+++.|..+++++ ++..+.-.....+|.++.-++.-.+....+.. ..
T Consensus 149 a~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~-------~~- 220 (477)
T PF11700_consen 149 AYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGST-------AS- 220 (477)
T ss_pred HHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCc-------cc-
Confidence 999999999888 88888888888888888877776665422110 00
Q ss_pred cCCcChhHHHHHHHHHHHH-HHHHhhccccCCCCCCCCcc--chhhhhhhhhhhhhhhhhhcccccccccccccchhHHH
Q 013453 211 GKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDS--CDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSS 287 (442)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (442)
...+.|..+.+.++.-++. +...+++||.|+....++.. .....++ -....+++.|.|.....
T Consensus 221 ~~~~~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~~--------------l~~t~k~~~~~~~~~~f 286 (477)
T PF11700_consen 221 NTWAIRVAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGFKR--------------LWRTFKEIRKLRQLFLF 286 (477)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHHHH--------------HHHHHHHHHhChHHHHH
Confidence 0344577777777665554 45667788876532221111 0111011 12344566677888888
Q ss_pred HHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchh--HHHHHHHHHHH
Q 013453 288 IIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPI--MVARIAGVLTI 365 (442)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 365 (442)
++.++++.-.......+...|.... +|++..+...+.....+.++++.+ +.++++||+|.| +.+........
T Consensus 287 Lia~~l~~dg~~ti~~~~~i~a~~~-----lg~s~~~l~~~~l~~~i~a~~Ga~-~~g~l~~r~g~k~~~~l~~~l~~~~ 360 (477)
T PF11700_consen 287 LIAYFLYSDGVNTIISFAGIYATEV-----LGMSTTQLIVFGLVVQIVAIIGAL-LFGWLQDRFGPKTKRTLLISLILWI 360 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-----cCcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCchhHHHHHHHHHHH
Confidence 8999988877777777777776643 799999999999999999999998 777999999988 66665554443
Q ss_pred HHHHHHH--HHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhcccCCC
Q 013453 366 PLLTSYP--YIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGA 441 (442)
Q Consensus 366 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i~G~ 441 (442)
+..+... +.....+......+.+..++.+.+....++...++.+++.|+++.+..+|++.......+.+||.+.|.
T Consensus 361 ~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~ 438 (477)
T PF11700_consen 361 IIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGL 438 (477)
T ss_pred HHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3222211 111111112222244455556667778889999999999999999999999999999999999998875
No 112
>PRK11462 putative transporter; Provisional
Probab=99.80 E-value=9.6e-17 Score=152.07 Aligned_cols=355 Identities=14% Similarity=0.053 Sum_probs=208.4
Q ss_pred ChhhHHHHHHHHHHhHhcchhhchhH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcc----cCCch
Q 013453 39 PITELFSIWIIVLCTALPISSLFPFL-YFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR----YGRKP 113 (442)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr----~Grr~ 113 (442)
++++.+.-.++.+...+........+ ..+.+.+|++... +|.+..+.-+--++..|+.|.++|| +||||
T Consensus 7 ~~~~k~~Yg~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~------~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~r 80 (460)
T PRK11462 7 SVKEKIGYGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGF------VGTMFLVARALDAISDPCMGLLADRTRSRWGKFR 80 (460)
T ss_pred cHhHHHhhccchhhhhHHHHHHHHHHHHHHHHhhCCCHHH------HHHHHHHHHHHHHHHhhhheehhccCCCCCCCcc
Confidence 33444433344444444444444333 5566778999999 9999999999999999999999995 79876
Q ss_pred hhH-HHHHHHHHHHHHHhccch------HHHHHHHHHHHHhhcchhhH-HHHHhhhhcc-ccchhhhhhhhhHhhhhHHH
Q 013453 114 VII-MGTASVVIFNTLFGLSVN------FWMAVLTRFLLGSLNGLLGP-IKAYACEIFR-EEHQALGLSTVSTAWGIGLI 184 (442)
Q Consensus 114 ~~~-~~~~~~~i~~~~~~~a~~------~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~ 184 (442)
..+ ++.+..+++.+++-..++ ...+++.-.+..++...... -.++.+|..+ ++||.+..++...+..+|..
T Consensus 81 p~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~ 160 (460)
T PRK11462 81 PWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGM 160 (460)
T ss_pred hhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 655 566777777766554442 34456666667777666544 5888999887 78999999999999999988
Q ss_pred HHHHhhhhhccccccCCCcccccccccCCcChhHHHHHHHHHHHHHH-HHhhccccCCCCCCCCccchhhhhhhhhhhhh
Q 013453 185 IGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAE 263 (442)
Q Consensus 185 ~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (442)
+++.+...+.+. .|.+. . ..+|+....+.+++.++... .....+|.++..+++ ..
T Consensus 161 ~~~~~~~plv~~-------~g~~~-~-~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~~~~~~~----~~----------- 216 (460)
T PRK11462 161 LSTVLMMPLVNL-------IGGDN-K-PLGFQGGIAVLSVVAFMMLAFCFFTTKERVEAPPTT----TS----------- 216 (460)
T ss_pred HHHHHHHHHHHH-------hCCCc-h-hhhHHHHHHHHHHHHHHHHHHHHhcceeccCCCccC----CC-----------
Confidence 888887666542 22110 0 23455544555555444433 333345533211110 00
Q ss_pred hhhhhcccccccccccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhH
Q 013453 264 VKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSL 343 (442)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (442)
.+...+..++||.++......++.........+....|.... .+ ++...+.+.....++.+++.. +
T Consensus 217 -------~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~-----~g-~~~~~~~~l~~~~i~~iig~~-l 282 (460)
T PRK11462 217 -------MREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWI-----LG-TPEVFVAFLTTYCVGNLIGSA-L 282 (460)
T ss_pred -------HHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhh-----cC-ChHHHHHHHHHHHHHHHHHHH-H
Confidence 112345677888877666555554444333333333222211 22 233445566666777788776 7
Q ss_pred HHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCC-------hhh
Q 013453 344 YPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVD-------QDQ 416 (442)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 416 (442)
..++.||+++|+....+.....+...++.+.+. . ..+.... ..++.+.......+..+++..|..+ .+.
T Consensus 283 ~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~-~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~ 358 (460)
T PRK11462 283 AKPLTDWKCKVTIFWWTNALLAVISLAMFFVPM--Q-ASITMFV-FIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRL 358 (460)
T ss_pred HHHHHHHhChHHHHHHHHHHHHHHHHHHHHhch--h-HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCc
Confidence 777888888887765444433332222222211 1 1111111 1222233333444555666776555 333
Q ss_pred hhHHHHHHHHHHHHHHhhhcccCCC
Q 013453 417 RGAANGIAMTGMSLFKAAGPAGGGA 441 (442)
Q Consensus 417 ~g~~~g~~~~~~~~g~~~gp~i~G~ 441 (442)
.|...+.......+|.++++.+.|.
T Consensus 359 ~g~~~a~~~f~~Klg~alg~~i~g~ 383 (460)
T PRK11462 359 TGISFAGTLFVLKLGLAFGGALIGW 383 (460)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555677778888999998887764
No 113
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.80 E-value=2.5e-16 Score=142.25 Aligned_cols=377 Identities=13% Similarity=0.123 Sum_probs=237.0
Q ss_pred hhHHHHHHHHHHhHhcchhhchhH-HHHHHHhc----ccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcc-cCCchh
Q 013453 41 TELFSIWIIVLCTALPISSLFPFL-YFMIKDFQ----IAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPV 114 (442)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~ 114 (442)
|.++.+...-+-.-++++.....+ -.+..+++ .++++ ..-+.++|..-.-+..+++|+++|| .|+|++
T Consensus 21 r~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~------A~~l~~~y~slVY~t~i~GG~laDr~LG~~~t 94 (498)
T COG3104 21 RGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETH------ATGLFSAYGSLVYLTPIIGGWLADRVLGTRRT 94 (498)
T ss_pred chHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHh------hHHHHHHHHHHHHHHHHHHHHHHHHhcchhHH
Confidence 557777777777777766655554 44455666 88887 7777788777777899999999999 599999
Q ss_pred hHHHHHHHHHHHHHHhccc--hHHHHHHHHHHHHhhcchhhH-HHHHhhhhcccc--chhhhhhhhhHhhhhHHHHHHHh
Q 013453 115 IIMGTASVVIFNTLFGLSV--NFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREE--HQALGLSTVSTAWGIGLIIGPAL 189 (442)
Q Consensus 115 ~~~~~~~~~i~~~~~~~a~--~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~~ 189 (442)
+..+.++..++.++.+.+. +...++++-++.++|.|..-+ ..+++.|.+|++ +|-..++++.++.++|+.++|.+
T Consensus 95 I~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i 174 (498)
T COG3104 95 IVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPII 174 (498)
T ss_pred HHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHH
Confidence 9999999999999999884 788999999999999999999 699999999865 47788999999999999999999
Q ss_pred hhhhccccccCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhccccCCCC----CCCCccchhhh---h-----hh
Q 013453 190 GGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRH----NDDDDSCDVSY---D-----AL 257 (442)
Q Consensus 190 ~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~----~~~~~~~~~~~---~-----~~ 257 (442)
.+++.+ +++|...|...++--...++.....+..-... +.+........ . ..
T Consensus 175 ~~~~~~----------------~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (498)
T COG3104 175 TGLLAI----------------NYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMIL 238 (498)
T ss_pred HHHHHH----------------hhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhHHHHHHHHH
Confidence 999998 45555555666655555555544444322111 11111111000 0 00
Q ss_pred hhh--hhhhhh--------------h-hccccccccccccc-ch---hHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccC
Q 013453 258 ESA--SAEVKE--------------E-EGREATPKKSLLKN-WP---LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLG 316 (442)
Q Consensus 258 ~~~--~~~~~~--------------~-~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (442)
... ....++ . --.+.....+...+ ++ ...+.+...++...+....+.+..|.......+
T Consensus 239 ~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~ 318 (498)
T COG3104 239 AALLTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPKVFDERRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQ 318 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhccc
Confidence 000 000000 0 00000011111111 11 223333334444444444445555554332222
Q ss_pred cccCChhHHHHHHHHHHHHHHHHHhhHHHHHHH--hhc--h--hHHHHHHHHHHHHHHHHHHHHHHh----hchhhHHHH
Q 013453 317 GLNYSTQMVGEVLAITGFSLLVFQLSLYPFLER--ILG--P--IMVARIAGVLTIPLLTSYPYIAML----SGFGLAFLL 386 (442)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 386 (442)
-+|++ ...+...+.+.+..++..++......+ +.+ + +.-..++..++..+++++...... .+.....+.
T Consensus 319 ~~g~~-vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~l 397 (498)
T COG3104 319 IFGFE-VPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWL 397 (498)
T ss_pred cccee-cCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHH
Confidence 13322 234556666677777776645544444 211 1 223345556666666655554211 122334445
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhcccCC
Q 013453 387 NCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGG 440 (442)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i~G 440 (442)
+...++..++.....|...+++.+..|+...+..+++.......|..++..+++
T Consensus 398 il~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~ 451 (498)
T COG3104 398 VLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAG 451 (498)
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecc
Confidence 555566677888889999999999999999999999999988888888877765
No 114
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.79 E-value=2.4e-17 Score=152.80 Aligned_cols=356 Identities=19% Similarity=0.262 Sum_probs=233.4
Q ss_pred HHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHH
Q 013453 46 IWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIF 125 (442)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~ 125 (442)
+.+-.+...+......+..+...+.++.+...+ .....+.-.....+...+.++..|.++||+|||..+.+..+...+.
T Consensus 27 ~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~-~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~ 105 (463)
T KOG2816|consen 27 LFLYMFSWGLSSTVMTNVILYLACTFGDDYQLE-NGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILP 105 (463)
T ss_pred HHHHHHHHHhcCcchhhhhhhhhcccccCccch-hhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHh
Confidence 334444444444444555555556555444331 1112333333446788899999999999999999999999999888
Q ss_pred HHHHhccchHHHHHHHHHHHHhhcch---hhHHHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCC
Q 013453 126 NTLFGLSVNFWMAVLTRFLLGSLNGL---LGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPN 202 (442)
Q Consensus 126 ~~~~~~a~~~~~l~~~r~l~G~~~g~---~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~ 202 (442)
.+...+.. |++++ +.|+..+. .....++++|....++|...+++.+.....+..++|.+++.+..
T Consensus 106 ~~~~~~~~--~~~~~---~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~------- 173 (463)
T KOG2816|consen 106 ALCLLFQG--YWFFL---LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVK------- 173 (463)
T ss_pred HHHHHHHH--HHHhh---hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHH-------
Confidence 88877765 44444 55654333 33358999999999999999999999999999999999999998
Q ss_pred cccccccccCCcChhHHHHHHHHHHHHH-HHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhccccccccccccc
Q 013453 203 LFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKN 281 (442)
Q Consensus 203 ~~gw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (442)
..+...++.+..+..++.. ....++||+.++.++++...... +... . ..++..+........-.+
T Consensus 174 ---------~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~~--~~~~--~-~~~~~~~~~~~~~~~~~~ 239 (463)
T KOG2816|consen 174 ---------FLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLREL--TPGS--L-DSSHVADAFQSLTKVGPD 239 (463)
T ss_pred ---------hcCchHHHHHHHHHHHHHHHHHhhccccccCcccccccccccc--CCCc--c-cchhhhhhhhhhcccCCC
Confidence 5556667777777776664 45677898876544431100000 0000 0 000000111111222223
Q ss_pred chhHHHHHHHHHHHHHHhhHHH-HHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHH
Q 013453 282 WPLMSSIIVYCVFSLHDMAYSE-IFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIA 360 (442)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (442)
|..+......+........-.. ....| ....++++..+.+.+.+..+....+++.+....+.+.++.++....+
T Consensus 240 r~~l~l~l~~~~~~~~~~~~~~~~~~~y-----l~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lG 314 (463)
T KOG2816|consen 240 RLLLLLLLVAFLSSLPEAGGASDVLLLY-----LKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLG 314 (463)
T ss_pred ccchHHHHHHHHHHHHHhcCceeEEEEE-----EeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHH
Confidence 3344433333332222221111 11122 22348999999999999999999999998888999999999988888
Q ss_pred HHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhcccCC
Q 013453 361 GVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGG 440 (442)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i~G 440 (442)
.....+....+.+... .|.... ............+...+..+...+++++|+++++...+..+...++|.+.+
T Consensus 315 l~~~~~~~~~~af~~~-----~w~~~~--~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~ 387 (463)
T KOG2816|consen 315 LLSEFLQLLLFAFATE-----TWMMFA--AGVVVALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYG 387 (463)
T ss_pred HHHHHHHHHHHHHhcc-----chhhhH--HHHHHHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHH
Confidence 8888888887777543 222111 122223455677888999999999999999999999999999999987654
No 115
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.79 E-value=1.2e-16 Score=145.61 Aligned_cols=363 Identities=17% Similarity=0.124 Sum_probs=247.6
Q ss_pred CCChhhHHHHHHHHHHhHhcchhhchhHH-HHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcc----cCC
Q 013453 37 GLPITELFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR----YGR 111 (442)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr----~Gr 111 (442)
+.+.+....-.+..+...+........+. .+.+.+|++... +|.+..+.-+--++.-|+.|.+.|| +||
T Consensus 8 kLs~~eki~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~------aG~iflv~RiiDAi~DP~~G~i~D~t~~r~Gr 81 (467)
T COG2211 8 KLSLKEKIGYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAAL------AGTIFLVARIIDAITDPIMGFIVDRTRSRWGR 81 (467)
T ss_pred cccHHHHHhhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHH------HHHHHHHHHHHHHHhcchheeeeccccccccc
Confidence 34445555555555555555555555554 445668999998 9999999999999999999999995 887
Q ss_pred chh-hHHHHHHHHHHHHHHhccc------hHHHHHHHHHHHHhhcchhh-HHHHHhhhhcc-ccchhhhhhhhhHhhhhH
Q 013453 112 KPV-IIMGTASVVIFNTLFGLSV------NFWMAVLTRFLLGSLNGLLG-PIKAYACEIFR-EEHQALGLSTVSTAWGIG 182 (442)
Q Consensus 112 r~~-~~~~~~~~~i~~~~~~~a~------~~~~l~~~r~l~G~~~g~~~-~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g 182 (442)
+|. ++++.+..++.+.++-.++ +....++...+.+++..... |-.++.+|.++ ++||.+..+.-..+.++|
T Consensus 82 fRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g 161 (467)
T COG2211 82 FRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLG 161 (467)
T ss_pred ccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHH
Confidence 655 5567788888888887766 34556677788888866654 46888888875 689999999999999999
Q ss_pred HHHHHHhhhhhccccccCCCcccccccccCCcChhHHHHHHHHHHHHH-HHHhhccccCCCCCCCCccchhhhhhhhhhh
Q 013453 183 LIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESAS 261 (442)
Q Consensus 183 ~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 261 (442)
..+...+...+....++.+. ..+|+....+.++++++.. .+++-.+|.+.+....+++.
T Consensus 162 ~~l~~~~~~plv~~~g~~~~---------~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~~----------- 221 (467)
T COG2211 162 GLLVAVLFPPLVKLFGGGDK---------ALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKTGV----------- 221 (467)
T ss_pred HHHHHHHHHHHHHHhCCCcc---------hhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCcccc-----------
Confidence 88777777676653322111 3356665566666665554 34455666554222111100
Q ss_pred hhhhhhhcccccccccccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHh
Q 013453 262 AEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQL 341 (442)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (442)
+.+.......+++||++...++...+.........+....|.... +|.+.............+.+++.+
T Consensus 222 ------~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~-----lg~~~l~~~~~~~~~~~~~l~~~~ 290 (467)
T COG2211 222 ------KLKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYV-----LGDPELFAYLLLLASGAGLLIGLI 290 (467)
T ss_pred ------cccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEE-----cCChHHHHHHHHHHHHHHHHHHHH
Confidence 111122344678999998888877666666555555555444322 566666666666665555555555
Q ss_pred hHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccC-------Ch
Q 013453 342 SLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAV-------DQ 414 (442)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 414 (442)
....+.+++|+|++..++.++.+++..++.+.+ .......++..+..+.......+..+++++|.. ..
T Consensus 291 -~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~----~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~ 365 (467)
T COG2211 291 -LWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTP----AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGV 365 (467)
T ss_pred -hHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhc----CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCC
Confidence 888899999999999999999888888877765 122333344434444555666777888888866 34
Q ss_pred hhhhHHHHHHHHHHHHHHhhhcccCCC
Q 013453 415 DQRGAANGIAMTGMSLFKAAGPAGGGA 441 (442)
Q Consensus 415 ~~~g~~~g~~~~~~~~g~~~gp~i~G~ 441 (442)
+.-|...|...++.-+|.+++..+.|+
T Consensus 366 R~eGi~~s~~tF~~K~g~ala~~~~g~ 392 (467)
T COG2211 366 RREGIVYSGMTFFRKLGLALAGFIPGW 392 (467)
T ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 566888999999999999998877664
No 116
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.77 E-value=2.5e-17 Score=146.02 Aligned_cols=354 Identities=11% Similarity=0.066 Sum_probs=223.0
Q ss_pred HHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHH
Q 013453 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (442)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i 124 (442)
...+..+.+.+....+.+.......-++ +.+. .-|+.-+|++.+....+++-|+.|++|-|...+++..+.++
T Consensus 49 ~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~------~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~i 121 (480)
T KOG2563|consen 49 AFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSA------ADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGI 121 (480)
T ss_pred HHHHHHhcCcchheeehhHHHHHHHHhc-chHH------HHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHH
Confidence 3334444444444555566666666677 6666 88999999999999999999999999999999999999999
Q ss_pred HHHHHhccc------hHH--HHHHHHHHHHhhcchhhHH-HHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhcc
Q 013453 125 FNTLFGLSV------NFW--MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 125 ~~~~~~~a~------~~~--~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (442)
++.+-..+. .++ ..+.+..+.+.++-..... .....-|++++||..+..+-.++..+|.++|.++...+..
T Consensus 122 Ga~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~ 201 (480)
T KOG2563|consen 122 GAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVP 201 (480)
T ss_pred HHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecC
Confidence 998876653 334 5556666666665555554 3455669999999999999999999999999999999987
Q ss_pred ccccCCCcccccccccCCcChhHHHHHHHHHHHHHH-HHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhcccccc
Q 013453 196 PAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATP 274 (442)
Q Consensus 196 ~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (442)
...+. ....|. ....+.....++.+.+. ..+..+|.|+......+..+. +.+..++
T Consensus 202 ~~~~~-~~~~~~-------~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~~---------------~~~f~~s 258 (480)
T KOG2563|consen 202 SSKDS-EDNSWL-------FFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAALQ---------------DASFPKS 258 (480)
T ss_pred CCCCc-chhHHH-------HHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhhh---------------cCcHHHH
Confidence 44211 111111 11122323333322222 223334433332221111100 1123456
Q ss_pred cccccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchh
Q 013453 275 KKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPI 354 (442)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (442)
.++.++|+++....+.+..-...+.+..+.+-. ... --|++...+|+......+++++++.+.+.+.||+.+-|
T Consensus 259 i~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~----~l~--~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk 332 (480)
T KOG2563|consen 259 IKSCFKNRQFIILAICYGIGLGLFNSLSTLLNL----ALC--PSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFK 332 (480)
T ss_pred HHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhh----ccc--cccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHH
Confidence 788999999988777776655544444333221 111 13556677888888888999999996666666665555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhh
Q 013453 355 MVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAA 434 (442)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~ 434 (442)
...++......++...+..... .....+.++......+.+..+..|...-+..|..-|..-++..|+.+..+++-+.+
T Consensus 333 ~~~~v~~~~~~v~~~~l~~~t~--~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~ 410 (480)
T KOG2563|consen 333 LTTLVLYLFALVGTLMLLTCTL--FLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVI 410 (480)
T ss_pred HHHHHHHHHHHHHHHHHHHhhc--cCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHH
Confidence 5666655555555322222222 22233334444445556667777888888888776667777888887777766554
Q ss_pred hc
Q 013453 435 GP 436 (442)
Q Consensus 435 gp 436 (442)
-.
T Consensus 411 ~~ 412 (480)
T KOG2563|consen 411 LV 412 (480)
T ss_pred HH
Confidence 43
No 117
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.76 E-value=1.1e-15 Score=135.48 Aligned_cols=329 Identities=16% Similarity=0.063 Sum_probs=216.8
Q ss_pred HHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccC-----CchhhHH-HHHHHHHHHHHHhcc-----c--
Q 013453 67 MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG-----RKPVIIM-GTASVVIFNTLFGLS-----V-- 133 (442)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~G-----rr~~~~~-~~~~~~i~~~~~~~a-----~-- 133 (442)
+..|++++..- .+.+.+...+.. ...+.+|+.+|+.+ ||..+++ +..+...+..+.+++ .
T Consensus 6 MIvEL~vpA~l------v~~lval~~~~a-p~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~ 78 (403)
T PF03209_consen 6 MIVELGVPAWL------VALLVALHYLVA-PLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESG 78 (403)
T ss_pred HHHHhccHHHH------HHHHHHHHHHHH-HHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 45677777766 888888887775 46899999999999 8877665 566665555555442 2
Q ss_pred ------h-HH--HHHHHHHHHHhhcchhhHH-HHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCc
Q 013453 134 ------N-FW--MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNL 203 (442)
Q Consensus 134 ------~-~~--~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~ 203 (442)
. .+ ...+...+.|+|.+...+. .++++|..|+|+|+++.++...+.-+|.+++..+.+.+.+..
T Consensus 79 ~~~~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~------ 152 (403)
T PF03209_consen 79 QQSSGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPF------ 152 (403)
T ss_pred cccccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHcccc------
Confidence 2 12 2344557778887777774 999999999999999999999999999999999999998721
Q ss_pred ccccccccCCcChhHHHHHHHH--HHHHHHHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhccccccccccccc
Q 013453 204 FSSESLFGKFPYFLPCLCISLF--AFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKN 281 (442)
Q Consensus 204 ~gw~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (442)
..-|..-.+.... .+..-+...+-.|++.....+.++++ +......++++..+
T Consensus 153 ---------s~~rL~~v~~~~a~i~~~l~~ia~wg~E~r~~~~~~~~~~~----------------~~~f~~a~~~~~~~ 207 (403)
T PF03209_consen 153 ---------SPERLIQVIQGVALIALLLNLIALWGQEPRRSRRAAAAERP----------------RPPFREAWRQVWAS 207 (403)
T ss_pred ---------CHHHHHHHHHHHHHHHHHHHHHHHHhcccCCcccccCCCCC----------------CccHHHHHHHHHhC
Confidence 1122222222222 22222222333444433222111000 11122345666777
Q ss_pred chhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHH
Q 013453 282 WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAG 361 (442)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (442)
|+.....+..++....++.- -...+|+--+-+|++..+...+....+.+.+++-...+.++.++.++++...+++
T Consensus 208 ~~a~~f~~fl~l~t~a~~~Q-----D~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~ 282 (403)
T PF03209_consen 208 PQARRFFVFLFLGTLAFFMQ-----DVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGC 282 (403)
T ss_pred CChhHHHHHHHHHHHHHHhh-----HHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHH
Confidence 77766655555544333322 3334566666799999999999999999999998877777788888999998999
Q ss_pred HHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhcccCCC
Q 013453 362 VLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGA 441 (442)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i~G~ 441 (442)
..+.+++.++.......+ .+..-.. .+..++..........+..-+..++++.|..+|.....+.++..+|..++|.
T Consensus 283 ~~~~~~f~lii~a~~~~~--~~~~~~~-~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~ 359 (403)
T PF03209_consen 283 LLGALAFALIILAGPLGS--PWLFRPG-VFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGA 359 (403)
T ss_pred HHHHHHHHHHHHHHhccc--chHHHHH-HHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888887766654432 2222222 2223333333334445555566778899999999999999888888776653
No 118
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.76 E-value=5.8e-20 Score=174.53 Aligned_cols=386 Identities=16% Similarity=0.191 Sum_probs=3.0
Q ss_pred HHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHH
Q 013453 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (442)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i 124 (442)
.+++..+...+..+.....+..+.++|+++..+ .|++.+.+-++..+..++..++.+|..|-|.+-++.++.++
T Consensus 7 ~~~~~~~~q~~~~g~~~~~lttiErRF~l~S~~------~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~ 80 (539)
T PF03137_consen 7 FLCLLGLFQMMVSGYVNSSLTTIERRFGLSSSQ------SGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGL 80 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHH
Confidence 445555666666677778889999999999999 99999999999999999999999998888889999999999
Q ss_pred HHHHHhccc--------------------------------------------------hHHHHHHHHHHHHhhcchhhH
Q 013453 125 FNTLFGLSV--------------------------------------------------NFWMAVLTRFLLGSLNGLLGP 154 (442)
Q Consensus 125 ~~~~~~~a~--------------------------------------------------~~~~l~~~r~l~G~~~g~~~~ 154 (442)
+++++++-+ -+..++++.++.|+|....++
T Consensus 81 g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~t 160 (539)
T PF03137_consen 81 GSLLFALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYT 160 (539)
T ss_dssp -----------------------------------------------------------------------SSS------
T ss_pred HHHHHhccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCcc
Confidence 999876510 125578889999999999999
Q ss_pred H-HHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCC-------cccccccccCCcChhHHHHHHHHH
Q 013453 155 I-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPN-------LFSSESLFGKFPYFLPCLCISLFA 226 (442)
Q Consensus 155 ~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~-------~~gw~~~~~~~~~~~~~~~~~~~~ 226 (442)
. .+|+-|..++++-+..+|+..+...+|.++|-++++.+.....+++. .-..+..| -..||.-+++.+.+.
T Consensus 161 LG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~W-vGAWWLGfli~g~~~ 239 (539)
T PF03137_consen 161 LGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRW-VGAWWLGFLICGILL 239 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccH-HHHHHHHHHHHHHHH
Confidence 4 99999999999999999999999999999999999988764322111 11112223 456888888888888
Q ss_pred HHHHHHHhhccccCCCCCCCCccchhhh---hhh-hhhhhhhh------hhhcccccccccccccchhHHHHHHHHHHHH
Q 013453 227 FGVTIAAFWLPETLHRHNDDDDSCDVSY---DAL-ESASAEVK------EEEGREATPKKSLLKNWPLMSSIIVYCVFSL 296 (442)
Q Consensus 227 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~---~~~-~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (442)
++..+.++++|+..+..++.+++.+..+ ++. ++..++++ +..++-....+++++||.+....+...+...
T Consensus 240 ~l~aipl~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~ 319 (539)
T PF03137_consen 240 FLSAIPLFFFPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESF 319 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHcCCccCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHH
Confidence 8777777777765443311111110000 000 00000110 1123345667889999999999999988888
Q ss_pred HHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhc--hhHHHHHHHHHHHHHHHH---H
Q 013453 297 HDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG--PIMVARIAGVLTIPLLTS---Y 371 (442)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~---~ 371 (442)
...++.++.|-|++. +++.++.+++++.....+.....+.++++++.||++ .|..+....+...+..+. .
T Consensus 320 ~~~G~~tF~pKylE~-----QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~ 394 (539)
T PF03137_consen 320 IVSGFATFLPKYLES-----QFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPL 394 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHH-----HhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888887764 488999999988877777665555668888887764 344444443333333222 1
Q ss_pred HH--HHH---------h----------------------------h-----c-hhhHHHHHHHHHHHHHHHHHHHHhhhh
Q 013453 372 PY--IAM---------L----------------------------S-----G-FGLAFLLNCASVVKNLLSVSIITGLFI 406 (442)
Q Consensus 372 ~~--~~~---------~----------------------------~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (442)
.+ .+. . . + ......+.+..++..+...........
T Consensus 395 ~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~ 474 (539)
T PF03137_consen 395 FFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTL 474 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchhe
Confidence 00 000 0 0 0 011222222222222222233333344
Q ss_pred hhcccCChhhhhHHHHHHHHHHH-HHHhhhcccCCCC
Q 013453 407 LQNRAVDQDQRGAANGIAMTGMS-LFKAAGPAGGGAL 442 (442)
Q Consensus 407 ~~~~~~~~~~~g~~~g~~~~~~~-~g~~~gp~i~G~l 442 (442)
..-+.+|+++|+.+.|+...+.. +|.+-||++.|++
T Consensus 475 i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~i 511 (539)
T PF03137_consen 475 ITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAI 511 (539)
T ss_dssp -------------------------------------
T ss_pred eeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHH
Confidence 45567899999999999987755 7889999999874
No 119
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.73 E-value=1.1e-15 Score=135.05 Aligned_cols=334 Identities=11% Similarity=-0.020 Sum_probs=222.0
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHH-HHHHHHHHHHHHhccch--HH-HHHHHHHHHHhhcchhhH-H
Q 013453 81 GSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM-GTASVVIFNTLFGLSVN--FW-MAVLTRFLLGSLNGLLGP-I 155 (442)
Q Consensus 81 ~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~-~~~~~~i~~~~~~~a~~--~~-~l~~~r~l~G~~~g~~~~-~ 155 (442)
..+.+...++..+..++.+|+.|.++|+.|+||..+. ...+..+..++..++++ ++ ..++.-.+..++.....+ -
T Consensus 57 ~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfy 136 (438)
T COG2270 57 TAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFY 136 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheeh
Confidence 3448889999999999999999999999997766554 44555555666666554 44 444555677777666666 4
Q ss_pred HHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhc--cccccCC-CcccccccccCCcChhHHHHHHHHHHHHHH-
Q 013453 156 KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA--QPAEKYP-NLFSSESLFGKFPYFLPCLCISLFAFGVTI- 231 (442)
Q Consensus 156 ~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~--~~~~~~~-~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~- 231 (442)
.+++.+..++++-++..++-.....+|+.+.-++.-... ....+.+ ..++-...- ...-|..+.+.++.-++..+
T Consensus 137 ds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~-~~~~ri~~~l~A~W~li~~iP 215 (438)
T COG2270 137 DSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPAD-GEDVRITGLLAALWWLLFALP 215 (438)
T ss_pred hhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccc-cccchhHHHHHHHHHHHHHhH
Confidence 999999999998888888777777777776655542221 1100000 011111111 33455555666665555433
Q ss_pred HHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhcccccccccccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcC
Q 013453 232 AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANS 311 (442)
Q Consensus 232 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (442)
.++..++.++.....++......+ +-..+.+++.+++++...++..+++.-...+....-..|..
T Consensus 216 m~~~v~~~~~~~~~~~~~l~~g~k--------------~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~- 280 (438)
T COG2270 216 MILNVHDAEKISSPPPTALRNGFK--------------ELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGA- 280 (438)
T ss_pred HHhcccccccccccchHHHHHHHH--------------HHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHH-
Confidence 444455544321011110011101 11234566677778888888888877666666666665554
Q ss_pred CcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHH
Q 013453 312 PKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASV 391 (442)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (442)
..+|++..+...+.....+..+++++ +.+++++|++.|+++..+.++..+..+...+... +.. ..+.++
T Consensus 281 ----~~~gls~~~lll~g~~~~vvA~lg~i-i~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~--~~~----f~i~gl 349 (438)
T COG2270 281 ----ADLGLSSTELLLIGIALSVVAALGAI-IAGFLDERFGSKPVLMIGLVILSIAALYLIFLEG--ELD----FWILGL 349 (438)
T ss_pred ----HHcCccHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCceeehHHHHHHHHHHHHHHHccc--cHH----HHHHHH
Confidence 23799999999999999999999998 7779999999998888877776666555444322 112 333344
Q ss_pred HHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhcccCCC
Q 013453 392 VKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGA 441 (442)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i~G~ 441 (442)
+.+.+..+.+....++..+.+|+++-++.+|+++..+..++.+||.+.+.
T Consensus 350 l~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v 399 (438)
T COG2270 350 LVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAV 399 (438)
T ss_pred HHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHH
Confidence 44456667788899999999999999999999999999999999987653
No 120
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.67 E-value=5.9e-14 Score=122.64 Aligned_cols=272 Identities=15% Similarity=0.116 Sum_probs=173.8
Q ss_pred HHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHH
Q 013453 50 VLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLF 129 (442)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~ 129 (442)
..+...+.....|....+.+++|.++.| ++.+....+....+..++.|.++||+|||+.-+..+++.+++++.
T Consensus 43 Y~La~~aDWLQGpY~Y~LY~~yg~~~~q------Ia~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~- 115 (354)
T PF05631_consen 43 YLLAMAADWLQGPYLYALYESYGFSEHQ------IAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLT- 115 (354)
T ss_pred HHHHHHHHHhhcchhHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH-
Confidence 3334445566678887777899999999 999999999999999999999999999999999999999998864
Q ss_pred hccchHHHHHHHHHHHHhhcchhhHH-HH-Hhhhhcccc----chhhhhhhhh-HhhhhHHHHHHHhhhhhccccccCCC
Q 013453 130 GLSVNFWMAVLTRFLLGSLNGLLGPI-KA-YACEIFREE----HQALGLSTVS-TAWGIGLIIGPALGGFLAQPAEKYPN 202 (442)
Q Consensus 130 ~~a~~~~~l~~~r~l~G~~~g~~~~~-~~-~i~~~~~~~----~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~~~~~~ 202 (442)
-..++++.++++|++.|++......+ .+ ++.|.-..+ ..+..++... ...++-.+.+.+++.++.+.
T Consensus 116 k~~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~------ 189 (354)
T PF05631_consen 116 KHSSNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADW------ 189 (354)
T ss_pred HhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHH------
Confidence 45688999999999999999988775 44 566653322 2233333222 23334445555666666651
Q ss_pred cccccccccCCcChhHHHHHHHHHHHHHHHH-hhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhccccccccccccc
Q 013453 203 LFSSESLFGKFPYFLPCLCISLFAFGVTIAA-FWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKN 281 (442)
Q Consensus 203 ~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (442)
. ..+-..||.....+.++..+.+ ..-+|......++.+..+. .....+.+++|
T Consensus 190 -~-------~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~~~~~~~~------------------~~~a~~~i~~d 243 (354)
T PF05631_consen 190 -F-------GFGPVAPFDAAIVLLAVAAVLILKTWPENYGDTSSSSSLSGS------------------FREAWRAILSD 243 (354)
T ss_pred -h-------CCCCcchHHHHHHHHHHHHHHHHhcccccCCCcccccchHHH------------------HHHHHHHHHcC
Confidence 1 1222455566655555554433 3345654432221111111 11234567788
Q ss_pred chhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHH
Q 013453 282 WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAG 361 (442)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (442)
|+++.+.++..++-...+.+ .++..|.... .+ ...-.|++++.+-++.++|+.+......++......+....
T Consensus 244 ~ril~LG~~qslFE~smy~F-----VflWtPaL~~-~~-~~~P~GlIFssFM~a~MlGS~lf~~l~s~~~~~e~~l~~v~ 316 (354)
T PF05631_consen 244 PRILLLGLIQSLFEGSMYLF-----VFLWTPALDP-DD-EELPLGLIFSSFMVAMMLGSSLFSRLLSKSLRPESLLRYVF 316 (354)
T ss_pred chhHHHHHHHHHHHHHHHHh-----eeeeeceecC-CC-CCCCchHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 99988888877766655444 3333343331 11 12347899999999999999855566666645444444444
Q ss_pred HHHHHH
Q 013453 362 VLTIPL 367 (442)
Q Consensus 362 ~~~~~~ 367 (442)
.+..++
T Consensus 317 ~~aa~~ 322 (354)
T PF05631_consen 317 AVAAVS 322 (354)
T ss_pred HHHHHH
Confidence 443333
No 121
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.67 E-value=1.5e-15 Score=144.40 Aligned_cols=313 Identities=16% Similarity=0.195 Sum_probs=235.8
Q ss_pred HHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHH
Q 013453 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (442)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i 124 (442)
.+.+..+...+....+...+..+.+.|+++.++ .|++.+.+-++..+...+..+..-|.-|-+.+-++.+++++
T Consensus 101 ~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~------sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~l 174 (735)
T KOG3626|consen 101 LLSLAAFAQGLYVGYFNSVITTIERRFKISSSQ------SGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGL 174 (735)
T ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCc------ceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHH
Confidence 455666777777777788889999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHhcc--------------------c-----------------------------h--HH-HHHHHHHHHHhhcchh
Q 013453 125 FNTLFGLS--------------------V-----------------------------N--FW-MAVLTRFLLGSLNGLL 152 (442)
Q Consensus 125 ~~~~~~~a--------------------~-----------------------------~--~~-~l~~~r~l~G~~~g~~ 152 (442)
+++++++- + + ++ .++++.++.|+|....
T Consensus 175 gsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi 254 (735)
T KOG3626|consen 175 GSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPI 254 (735)
T ss_pred HHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCC
Confidence 99998762 0 0 22 5677889999999999
Q ss_pred hHH-HHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccC-CC--cc-cccccccCCcChhHHHHHHHHHH
Q 013453 153 GPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKY-PN--LF-SSESLFGKFPYFLPCLCISLFAF 227 (442)
Q Consensus 153 ~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~-~~--~~-gw~~~~~~~~~~~~~~~~~~~~~ 227 (442)
.+. .+|+-|...+++-...+|+......+|.++|-++++++...-... .. .. .-+.-| -..||.-|++.+.+.+
T Consensus 255 ~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrW-IGAWWlGFLi~g~~~~ 333 (735)
T KOG3626|consen 255 FTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRW-IGAWWLGFLICGALLL 333 (735)
T ss_pred ccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcch-hhHHHHHHHHHHHHHH
Confidence 994 999999999999999999999999999999999999987643222 10 11 111223 5578999999999999
Q ss_pred HHHHHHhhccccCCCCCCCCccchhhhhhhhhh-hhhh---hhhhcccccccccccccchhHHHHHHHHHHHHHHhhHHH
Q 013453 228 GVTIAAFWLPETLHRHNDDDDSCDVSYDALESA-SAEV---KEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSE 303 (442)
Q Consensus 228 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (442)
+..+.++++|...+...++++..+....+.++. .+++ .+.-++-+...+++++||.+...++...+......++.+
T Consensus 334 ~~a~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~t 413 (735)
T KOG3626|consen 334 FSAVPLFFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYIT 413 (735)
T ss_pred HHHHHHHhCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHH
Confidence 888888888876554332211111100011100 0000 111123356678899999999999999999999999999
Q ss_pred HHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhc--hhHHHHHHHHHHHHHHH
Q 013453 304 IFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG--PIMVARIAGVLTIPLLT 369 (442)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 369 (442)
+.|-|+.+. ++.++..+..++...++.....+.++++++.+|++ .|....+.++...+.++
T Consensus 414 FlPKyLE~Q-----fg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~l~ 476 (735)
T KOG3626|consen 414 FLPKYLETQ-----FGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLSLL 476 (735)
T ss_pred hhHHHHHHH-----cCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHHHH
Confidence 999988744 89999999999988888888888889999988764 44444444444444433
No 122
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.65 E-value=1.1e-14 Score=139.78 Aligned_cols=174 Identities=15% Similarity=0.241 Sum_probs=126.4
Q ss_pred HHhHhcchhhchhHHHHH-HHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHH-
Q 013453 51 LCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTL- 128 (442)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~- 128 (442)
+............+|.+. +++|.+..+ .++..+...++..++.++.|+++||+|||+++..+.++..+....
T Consensus 260 ~~~~~~~~~~~~~~p~~l~~~~g~s~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~ 333 (490)
T PRK10642 260 IATNVTYYMLLTYMPSYLSHNLHYSEDH------GVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPA 333 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 333344455556677766 567888777 778888889999999999999999999999988877654433322
Q ss_pred --HhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCccc
Q 013453 129 --FGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFS 205 (442)
Q Consensus 129 --~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~g 205 (442)
...+++...++++|++.|++.+.... ...++.|.+|++.|+++++.......++..++|.+.+++.+.
T Consensus 334 ~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~--------- 404 (490)
T PRK10642 334 FILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVES--------- 404 (490)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHH---------
Confidence 22345677888899999987666555 578889999999999999975444556677899999988762
Q ss_pred ccccccCCcChhHHHHHHHHHHHHHHHHhhccccCCCCCC
Q 013453 206 SESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHND 245 (442)
Q Consensus 206 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 245 (442)
...|+.++....+.+++..+..+++||+|++..+
T Consensus 405 ------~~~~~~~~~~~~~~~~i~~~~~~~~pes~~~~~~ 438 (490)
T PRK10642 405 ------TQNLMMPAYYLMVVAVIGLITGVTMKETANRPLK 438 (490)
T ss_pred ------hCCchHHHHHHHHHHHHHHHHHHHhccccCCCCC
Confidence 1224555555666666666666778999887543
No 123
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.64 E-value=4.4e-15 Score=139.27 Aligned_cols=183 Identities=12% Similarity=0.131 Sum_probs=131.7
Q ss_pred HHHhHhcchhhchhHHHHHHHhcccccch--hhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHH
Q 013453 50 VLCTALPISSLFPFLYFMIKDFQIAKREE--DIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNT 127 (442)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~ 127 (442)
.++............+.+.++.+.++... ......+.+.++..++..++.++.|+++||+|||+++..+.++.+++..
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~ 296 (418)
T TIGR00889 217 SMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFG 296 (418)
T ss_pred HHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 33333333334455566777777554210 0001179999999999999999999999999999999999999988877
Q ss_pred HHhccc----hHHHHHHHHHHHHhhcchhhHH-HHHhhhhccccchhhhhhhhh-HhhhhHHHHHHHhhhhhccccccCC
Q 013453 128 LFGLSV----NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVS-TAWGIGLIIGPALGGFLAQPAEKYP 201 (442)
Q Consensus 128 ~~~~a~----~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~~~~~ 201 (442)
+..... +++.+++.+++.|++.+...+. ..++.|++|+++|++++++.+ ...++|..+||.++|.+.+..+..
T Consensus 297 l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~- 375 (418)
T TIGR00889 297 FFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAY- 375 (418)
T ss_pred HHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccc-
Confidence 666532 3466778899999998888774 889999999999999999997 678899999999999999832100
Q ss_pred CcccccccccCCcChhHHHHHHHHHHHH-HHHHhhccccCCC
Q 013453 202 NLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHR 242 (442)
Q Consensus 202 ~~~gw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~ 242 (442)
.. ++|+..+.+.+++.++. ++..+++||+.+.
T Consensus 376 ~~---------~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~~ 408 (418)
T TIGR00889 376 GT---------FDWQTMWLFFAGYIAILAVLFMIFFKYSHNA 408 (418)
T ss_pred cC---------CchHHHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 01 23454446666665555 4455667776443
No 124
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.64 E-value=6.8e-15 Score=144.49 Aligned_cols=140 Identities=14% Similarity=0.105 Sum_probs=118.6
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhc
Q 013453 85 GYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIF 163 (442)
Q Consensus 85 g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~ 163 (442)
.+...+..++..++.++.|+++||+|||++++++.++.+++.++.+++++...+++.+++.|++.+...+ ..++++|++
T Consensus 598 ~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~ 677 (742)
T TIGR01299 598 YFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELY 677 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4456677789999999999999999999999999999999999999998888888889998887666666 589999999
Q ss_pred cccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhccccCC
Q 013453 164 REEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLH 241 (442)
Q Consensus 164 ~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 241 (442)
|.++|++++|+.++...+|.++||.+++.+.+ . ....++++.+++.++..++..++||+..
T Consensus 678 Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~----------------~-~~~~pf~i~a~~lll~~ll~~~LPET~~ 738 (742)
T TIGR01299 678 PSDKRATAFGFLNALCKAAAVLGILIFGSFVG----------------I-TKAAPILFASAALACGGLLALKLPDTRG 738 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------h-hhHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 99999999999999999999999999998875 1 1345666666666666666667788654
No 125
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.60 E-value=5.2e-14 Score=131.41 Aligned_cols=158 Identities=15% Similarity=0.182 Sum_probs=124.7
Q ss_pred hhhchhHHHHH-HHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhccchHH
Q 013453 58 SSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFW 136 (442)
Q Consensus 58 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a~~~~ 136 (442)
.......|.+. +++|.++.+ .+++.+...++..++.++.|+++||+|||+.+..+.+...+........++.+
T Consensus 233 ~~~~~~~p~~l~~~~~~~~~~------~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (393)
T PRK15011 233 SLYIINMPLFIINELHLPEKL------AGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPA 306 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 33444566554 668988888 88888888888888999999999999999988877766665555555677888
Q ss_pred HHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCcccccccccCCcC
Q 013453 137 MAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPY 215 (442)
Q Consensus 137 ~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~ 215 (442)
.+++.+++.+++.|...+ ...+..|..|+ +|+++.++.+....+|..++|.++|.+.+ .++|
T Consensus 307 ~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~----------------~~g~ 369 (393)
T PRK15011 307 ILLGLQLLNAIYIGILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAE----------------IWNY 369 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHH----------------Hhhh
Confidence 888899998888777666 47778898885 59999999999999999999999999998 4455
Q ss_pred hhHHHHHHHHHHHHHHHHhhccc
Q 013453 216 FLPCLCISLFAFGVTIAAFWLPE 238 (442)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~e 238 (442)
+..+.+.+++.++.++..++.||
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 370 HAVFWFALVMIIATLFCLLRIKD 392 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcC
Confidence 55657777777777777776665
No 126
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.59 E-value=9.3e-15 Score=115.36 Aligned_cols=135 Identities=33% Similarity=0.567 Sum_probs=113.1
Q ss_pred HHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhcccc
Q 013453 88 GSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREE 166 (442)
Q Consensus 88 ~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~ 166 (442)
.+.+.++..+++++.|++.||+|||+.+..+.....++.+....+++++.+.+.+++.|++.+...+ ..+++.|.+|++
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPE 83 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChh
Confidence 3456778889999999999999999999999999999999888899999999999999999888877 589999999999
Q ss_pred chhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCcccccccccCCcChhHHHHHHHHHHHHHHH-Hhhccc
Q 013453 167 HQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPE 238 (442)
Q Consensus 167 ~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e 238 (442)
+|++..+..+....+|..++|.+++.+.+ ..+|+..+.+.+...++..+. .+..||
T Consensus 84 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 84 ERGVALGLMSAGIALGPLLGPPLGGVLAQ----------------FLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhhHHHHHHHHhHHHHHHHhHHhHHHHhc----------------ccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 99999999999999999999999999987 334444446666555555443 333444
No 127
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.58 E-value=7.3e-14 Score=130.99 Aligned_cols=161 Identities=19% Similarity=0.173 Sum_probs=128.6
Q ss_pred cchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhccchH
Q 013453 56 PISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNF 135 (442)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a~~~ 135 (442)
........+|.+.++.|. ++ .++..+.+.++..++.++.|++.||+|||+.+..+..+.+++.++..+.++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~--~~------~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (399)
T PRK05122 231 GFGTIATFITLYYAARGW--DG------AALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSP 302 (399)
T ss_pred HHHHHHHHHHHHHHHccc--cc------chHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccH
Confidence 333444555666666655 33 5667788889999999999999999999999999988888888888888888
Q ss_pred HHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCcccccccccCCc
Q 013453 136 WMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFP 214 (442)
Q Consensus 136 ~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~ 214 (442)
+.+++.+++.|++.+...+ ....+.|.+|+++|+++.++++....+|..++|.+.+.+.+ ..+
T Consensus 303 ~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~----------------~~g 366 (399)
T PRK05122 303 WMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVAS----------------WFG 366 (399)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------HcC
Confidence 8888999999999888777 47788899999999999999999999999999999999987 444
Q ss_pred ChhHHHHHHHHHHHHHHHHhhccccC
Q 013453 215 YFLPCLCISLFAFGVTIAAFWLPETL 240 (442)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~e~~ 240 (442)
|+..+.+.+.+.++..+..+.+++++
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (399)
T PRK05122 367 YPSIFLAAALAALLGLALTWLLYRRA 392 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 55555777776666665555555543
No 128
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.57 E-value=6.4e-14 Score=131.71 Aligned_cols=141 Identities=21% Similarity=0.267 Sum_probs=119.0
Q ss_pred HHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHH
Q 013453 49 IVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTL 128 (442)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~ 128 (442)
..+.............|.+.++.|.++.+ .+.+.+.+.++..++.++.|+++||+|||+.+..+.+...++.++
T Consensus 228 ~~~~~~~~~~~~~~~~p~~~~~~g~s~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~ 301 (406)
T PRK11551 228 SYFFTLIVLYFLLNWLPSLLVGQGLSRSQ------AGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAA 301 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCChhh------hhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 33333333344455678888889999888 999999999999999999999999999999998887777777777
Q ss_pred HhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhcc
Q 013453 129 FGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 129 ~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (442)
..+.++.+.+.+..++.|++.+...+ ..+++.|.+|+++|++..++.+....+|..++|.++|.+.+
T Consensus 302 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~ 369 (406)
T PRK11551 302 LAAAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLA 369 (406)
T ss_pred HHhcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhc
Confidence 77778888888888888887666666 58899999999999999999999999999999999999987
No 129
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.56 E-value=2.2e-14 Score=135.31 Aligned_cols=140 Identities=19% Similarity=0.161 Sum_probs=116.1
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhh
Q 013453 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEI 162 (442)
Q Consensus 84 ~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~ 162 (442)
.|++.++..++..++.+++|++.||+|||+.+..+.++.+++.++.+++++.+.+++.+++.|++.+...+ ...++.|.
T Consensus 264 ~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 343 (420)
T PRK09528 264 FGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLN 343 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999989999999999999999999998877766 58899999
Q ss_pred ccccchhhhhhh-hhHhhhhHHHHHHHhhhhhccccccCCCcccccccccCCcChhHHHHHHHHHHHHH-HHHhhcccc
Q 013453 163 FREEHQALGLST-VSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPET 239 (442)
Q Consensus 163 ~~~~~r~~~~~~-~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~ 239 (442)
+|++.|+...+. ++....+|.+++|.+.|++.+ .+| |+..+...+++.++.. +....++++
T Consensus 344 ~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~-------~~G---------~~~~f~~~~~~~~i~~~~~~~~~~~~ 406 (420)
T PRK09528 344 FDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYD-------SIG---------FQGTYLILGGIVLLFTLISVFTLSGD 406 (420)
T ss_pred cCccceeeeeeehHHHHHHHHHHHHHHHHHHHHH-------hhC---------chHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999887765 677888999999999999998 334 4555566666655544 334444443
No 130
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.56 E-value=4e-14 Score=131.69 Aligned_cols=144 Identities=13% Similarity=0.030 Sum_probs=116.9
Q ss_pred HHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHH
Q 013453 46 IWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIF 125 (442)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~ 125 (442)
.....+...+.........+.+.++++.++.+ .+++.+.+.++..++.++.|++.||+|||+.+.++.++..++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~ 283 (377)
T TIGR00890 210 LYLSFFLNAVSGLLLIGLYKPYGQSLGLSDGF------LVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVG 283 (377)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHH
Confidence 33333333333333444556677888888877 899999999999999999999999999999999999988888
Q ss_pred HHHHhccchH--HHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhcc
Q 013453 126 NTLFGLSVNF--WMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 126 ~~~~~~a~~~--~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (442)
.++..+.++. ..+++..++.|++.+...+ ...++.|.+|+++|+++.++.+....+|..++|.+.+.+.+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 356 (377)
T TIGR00890 284 MAAMLFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALT 356 (377)
T ss_pred HHHHHHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8877776643 3345667888888777666 48899999999999999999999999999999999999988
No 131
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.56 E-value=1.3e-13 Score=128.30 Aligned_cols=148 Identities=12% Similarity=0.064 Sum_probs=129.7
Q ss_pred hhHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHH
Q 013453 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (442)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~ 120 (442)
++++...+..++............|.+.+|+|.++.+ .|++.+...++..+..++.+++.||+|+|+.+.++.+
T Consensus 205 ~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~g~s~~~------~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~ 278 (382)
T TIGR00902 205 PMNLRFLAAVCLIQGAHAAYYGFSAIYWQAAGISASA------TGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAI 278 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHhH------HHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHH
Confidence 3445445555555555666667778888889999998 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhh-HhhhhHHHHHHHhhhhhcc
Q 013453 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVS-TAWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 121 ~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~ 195 (442)
...+..++.+++++.+.+++.+++.|+..+...+ ...++.+. |+++|++..++++ ...++|..+||.++|++.+
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~ 354 (382)
T TIGR00902 279 ACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYP 354 (382)
T ss_pred HHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999888 48899988 9999999999876 5788999999999999998
No 132
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.54 E-value=2.3e-13 Score=125.20 Aligned_cols=164 Identities=22% Similarity=0.320 Sum_probs=138.8
Q ss_pred HHHhHhcchhhchhHHHHHHHh-cccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCch-hhHHHHHHHHHHHH
Q 013453 50 VLCTALPISSLFPFLYFMIKDF-QIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKP-VIIMGTASVVIFNT 127 (442)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~-~~~~~~~~~~i~~~ 127 (442)
.+.............|.+.++. |.++.+ .+++.+...++..++.++.|++.||+|||+ .+..+..+..++.+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 257 (352)
T cd06174 184 FFLLSFGYYGLLTYLPLYLQEVLGLSAAE------AGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLL 257 (352)
T ss_pred HHHHHhHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 3344444555566677777665 888888 999999999999999999999999999999 99999999999999
Q ss_pred HHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCcccc
Q 013453 128 LFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSS 206 (442)
Q Consensus 128 ~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw 206 (442)
.....++.+.+++..++.|++.+...+ ..+++.|..|+++|++.+++.+....+|..++|.+.+.+.+
T Consensus 258 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~----------- 326 (352)
T cd06174 258 LLALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLD----------- 326 (352)
T ss_pred HHHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----------
Confidence 999999999999999999999888888 59999999999999999999999999999999999999998
Q ss_pred cccccCCcChhHHHHHHHHHHHHHHHHhh
Q 013453 207 ESLFGKFPYFLPCLCISLFAFGVTIAAFW 235 (442)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (442)
..+|+..+.+.+++.++..+...+
T Consensus 327 -----~~~~~~~~~~~~~~~~i~~i~~~~ 350 (352)
T cd06174 327 -----TGGYGGVFLILAALALLAALLLLL 350 (352)
T ss_pred -----ccCcchHHHHHHHHHHHHHHHhee
Confidence 444555557777776666554443
No 133
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.53 E-value=3.5e-13 Score=125.35 Aligned_cols=155 Identities=14% Similarity=0.276 Sum_probs=123.0
Q ss_pred chhHHHH-HHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhccchHHHHH
Q 013453 61 FPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAV 139 (442)
Q Consensus 61 ~~~~~~~-~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a~~~~~l~ 139 (442)
....|.+ .+++|.++.+ .+++.+.......++.++.|++.||+|||+++.++.++..+......+.++.+.++
T Consensus 219 ~~~~~~~~~~~~g~~~~~------~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (375)
T TIGR00899 219 IINMPLLIIHELGLPDKL------AGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALL 292 (375)
T ss_pred HhhhHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344544 4678998888 88888888777888899999999999999999888877766666666677888888
Q ss_pred HHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCcccccccccCCcChhH
Q 013453 140 LTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLP 218 (442)
Q Consensus 140 ~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~ 218 (442)
+.+++.|++.+...+ ...++.|..|+ +|+++.++.+....+|..++|.+++.+.+ ..+|+..
T Consensus 293 ~~~~~~g~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~----------------~~g~~~~ 355 (375)
T TIGR00899 293 MLQLLNAIFIGILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAE----------------RWSYHAV 355 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHH----------------hccchhH
Confidence 899999998887777 47888898875 56799999999999999999999999988 4445555
Q ss_pred HHHHHHHHHHHHHHHhhccc
Q 013453 219 CLCISLFAFGVTIAAFWLPE 238 (442)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~e 238 (442)
+.+.+++.++..+...+++|
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~ 375 (375)
T TIGR00899 356 YWFAIVMLIVALFCLLLIKD 375 (375)
T ss_pred HHHHHHHHHHHHHHHheecC
Confidence 57777776666666555543
No 134
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.52 E-value=3.6e-13 Score=126.77 Aligned_cols=161 Identities=17% Similarity=0.236 Sum_probs=127.0
Q ss_pred cchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhccchH
Q 013453 56 PISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNF 135 (442)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a~~~ 135 (442)
......+..+.+.++.+.+..+ .....+.+.++..++..++.+..|+++||+|||+.+..+..+..++.+...+.++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (408)
T PRK09874 234 ATGSIAPILTLYVRELAGNVSN--IAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTP 311 (408)
T ss_pred HHHHHHHHHHHHHHHHhccchH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccH
Confidence 3344556667676665433322 12225677777888889999999999999999999999988888888877888888
Q ss_pred HHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCcccccccccCCc
Q 013453 136 WMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFP 214 (442)
Q Consensus 136 ~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~ 214 (442)
+.+++.+++.|++.+...+ ..+++.+..|+++|++.+++.+....+|..+||.++|.+.+ ..+
T Consensus 312 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~----------------~~g 375 (408)
T PRK09874 312 LQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISA----------------NYG 375 (408)
T ss_pred HHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHh----------------hcc
Confidence 9999999999999888888 48888899999999999999999999999999999999988 444
Q ss_pred ChhHHHHHHHHHHHHHHHHh
Q 013453 215 YFLPCLCISLFAFGVTIAAF 234 (442)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~ 234 (442)
|+..+.+.+++.++..+..+
T Consensus 376 ~~~~f~~~~~~~l~~~~~~~ 395 (408)
T PRK09874 376 FRAVFLVTAGVVLFNAVYSW 395 (408)
T ss_pred hhHHHHHHHHHHHHHHHHHH
Confidence 55555777766666554433
No 135
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.52 E-value=2.5e-13 Score=128.08 Aligned_cols=161 Identities=17% Similarity=0.118 Sum_probs=131.5
Q ss_pred hchhHHHHHHH-hcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhccchHHHH
Q 013453 60 LFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMA 138 (442)
Q Consensus 60 ~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a~~~~~l 138 (442)
.....|.+.++ +|.+..+ .|++.+...++..++.++.+++.||.++|+.+..+.++..++.++..+.++.+..
T Consensus 242 ~~~~~p~~~~~~~g~~~~~------~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 315 (417)
T PRK10489 242 VRVLYPALADEVWQMGAAQ------IGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILA 315 (417)
T ss_pred HHHhhHHHHHhccCCChhH------hHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHH
Confidence 44556777777 8998888 9999999999999999999999999888888888888888888888888888888
Q ss_pred HHHHHHHHhhcchhhHH-HHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCcccccccccCCcChh
Q 013453 139 VLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFL 217 (442)
Q Consensus 139 ~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~ 217 (442)
.+..++.|++.+...+. .+++.|..|++.|++++++++....+|..+||.+.|.+.+ ..+++.
T Consensus 316 ~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~----------------~~g~~~ 379 (417)
T PRK10489 316 VLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGA----------------MMTPVA 379 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHH----------------Hhchhh
Confidence 88899999988877774 7889999999999999999999999999999999999998 334444
Q ss_pred HHHHHHHHHHH-HHHHHhhccccCCC
Q 013453 218 PCLCISLFAFG-VTIAAFWLPETLHR 242 (442)
Q Consensus 218 ~~~~~~~~~~~-~~~~~~~~~e~~~~ 242 (442)
.+...+...++ ..+....+||.++.
T Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (417)
T PRK10489 380 SASASGFGLLIIGVLLLLVLGELRRF 405 (417)
T ss_pred HHHHHHHHHHHHHHHHHHhccccccc
Confidence 44555544443 34555666766543
No 136
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.52 E-value=7.7e-14 Score=132.54 Aligned_cols=148 Identities=17% Similarity=0.148 Sum_probs=118.3
Q ss_pred hHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhccc--CCchhhHH--
Q 013453 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY--GRKPVIIM-- 117 (442)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~--Grr~~~~~-- 117 (442)
.++......++...........+|.+.+++|.+..+ .+++.+...++..+++++.|+++||. ++|+...+
T Consensus 242 ~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~ 315 (455)
T TIGR00892 242 GFLVYLSGNVIMFLGFFAPIIFLVPYAKDKGVDEYE------AAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSF 315 (455)
T ss_pred hHHHHHHHHHHHHHHccchHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHH
Confidence 344444445555555555556678888889999888 99999999999999999999999984 33433333
Q ss_pred HHHHHHHHHHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhcc
Q 013453 118 GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 118 ~~~~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (442)
+.++.+++.++...+++++.+++.+++.|++.+...+ ..+++.|.+|++++++.+++++....+|..+||.++|.+.+
T Consensus 316 ~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~ 394 (455)
T TIGR00892 316 ALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVD 394 (455)
T ss_pred HHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeeh
Confidence 3444455556667788999999999999999888877 48999999999999999999999999999999999999987
No 137
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.51 E-value=1.3e-12 Score=122.05 Aligned_cols=177 Identities=12% Similarity=0.076 Sum_probs=127.5
Q ss_pred HHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHH
Q 013453 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (442)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~ 122 (442)
.+.+.+..++............|.+.+++|.+..+ .|.+.+.+.++..++.++.|++.||+|||+.+..+..+.
T Consensus 207 ~~~l~~~~~~~~~~~~~~~~~lp~~l~~~g~s~~~------ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~ 280 (393)
T PRK09705 207 AWTLGVYFGLINGGYASLIAWLPAFYIEIGASAQY------SGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQ 280 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhh------hhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHH
Confidence 34344444444455555666778888888999888 999999999999999999999999999999999888877
Q ss_pred HHHHHHHhc-cchHHHHHHHHHHHHhhcchhhH-HHHHhhhhcc-ccchhhhhhhhhHhhhhHHHHHHHhhhhhcccccc
Q 013453 123 VIFNTLFGL-SVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFR-EEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (442)
Q Consensus 123 ~i~~~~~~~-a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 199 (442)
.++.++... .++...+. -++.|++.+...| ......+..+ +++|++..++.+....++..++|.+.+++.+.
T Consensus 281 ~~~~~~~~~~~~~~~~~~--~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~--- 355 (393)
T PRK09705 281 LVGFCGFIWLPLQLPVLW--AMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSI--- 355 (393)
T ss_pred HHHHHHHHHccchHHHHH--HHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---
Confidence 777665543 33322222 2466887777666 4666667764 67899999999999999999999999999982
Q ss_pred CCCcccccccccCCcChhHHHHHHHHHHHHHH-HHhhccccCCC
Q 013453 200 YPNLFSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHR 242 (442)
Q Consensus 200 ~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~ 242 (442)
.| +|...+.+.++..++..+ ...+.||++.+
T Consensus 356 ----~g--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (393)
T PRK09705 356 ----SG--------NYLMDWAFHALCVVGLMIITLRFAPARFPQ 387 (393)
T ss_pred ----hC--------CchHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 11 244545665555555443 34556666544
No 138
>PRK12382 putative transporter; Provisional
Probab=99.50 E-value=7.2e-13 Score=123.94 Aligned_cols=154 Identities=21% Similarity=0.216 Sum_probs=124.3
Q ss_pred cchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhccchH
Q 013453 56 PISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNF 135 (442)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a~~~ 135 (442)
.........|.+.++.+.+ + .++..+.+.++..+++++.|++.||+||||.+..+..+..++.++..+.++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~--~------~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (392)
T PRK12382 231 GFAVIGTFVSLYFASKGWA--M------AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTA 302 (392)
T ss_pred HHhHHHHHHHHHHHhcCCc--h------hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccH
Confidence 3334445556666666554 3 5666777888889999999999999999999999999999988888888888
Q ss_pred HHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCcccccccccCCc
Q 013453 136 WMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFP 214 (442)
Q Consensus 136 ~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~ 214 (442)
+.+++..++.|++.+...+ ..+.+.|.+|+++|+++.++.+....+|..++|.+.+.+.+ ..|
T Consensus 303 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~-------~~g--------- 366 (392)
T PRK12382 303 WVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLAT-------SFG--------- 366 (392)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HhC---------
Confidence 8888899999999888777 47888999999999999999999999999999999999998 334
Q ss_pred ChhHHHHHHHHHHHHHHHH
Q 013453 215 YFLPCLCISLFAFGVTIAA 233 (442)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~ 233 (442)
|+..+.+.+.+.++..+..
T Consensus 367 ~~~~~~~~~~~~~~~~~~~ 385 (392)
T PRK12382 367 YPSVFLAGAISAVLGIIVT 385 (392)
T ss_pred chHHHHHHHHHHHHHHHHH
Confidence 4444466666666554443
No 139
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.50 E-value=8.8e-13 Score=122.73 Aligned_cols=154 Identities=19% Similarity=0.256 Sum_probs=118.6
Q ss_pred chhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhccchHH
Q 013453 57 ISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFW 136 (442)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a~~~~ 136 (442)
.......+|.+.++.|.++.+ .+++.+...++..+++++.|++.||+|+|+++..+.....++.+... + ..
T Consensus 216 ~~~~~~~lp~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~ 286 (381)
T PRK03633 216 LGSLYGLMPLYLNHQGMSDAS------IGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QA 286 (381)
T ss_pred HHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hH
Confidence 334445678888888888888 89999999999999999999999999999999888888777665443 2 23
Q ss_pred HHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCcccccccccCCcC
Q 013453 137 MAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPY 215 (442)
Q Consensus 137 ~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~ 215 (442)
......++.|++.+...| ..+.+.|..|+++++...+..+...++|..+||.++|++.+ .. ++
T Consensus 287 ~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~-------~~---------g~ 350 (381)
T PRK03633 287 AMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQ-------NY---------SD 350 (381)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------Hh---------Cc
Confidence 344567788887666667 58888999998888888888888999999999999999998 33 34
Q ss_pred hhHHHHHHHHHHHHHHHHhh
Q 013453 216 FLPCLCISLFAFGVTIAAFW 235 (442)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~ 235 (442)
+..+.+.+.+.++..+..++
T Consensus 351 ~~~f~~~~~~~l~~~~~~~~ 370 (381)
T PRK03633 351 NLLFIMIASVSFIYLLMLLR 370 (381)
T ss_pred cHHHHHHHHHHHHHHHHHHh
Confidence 44446666666555444433
No 140
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.49 E-value=7.1e-13 Score=124.20 Aligned_cols=171 Identities=15% Similarity=0.239 Sum_probs=125.7
Q ss_pred HHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhH-HHHHH
Q 013453 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII-MGTAS 121 (442)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~-~~~~~ 121 (442)
++...+..++............|.+.+++|.+..+ .+++.+...++..++.++.|+++||+|||+.+. .+.+.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~------~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~ 297 (402)
T TIGR00897 224 VLLGGMVRIINTIGLFGFAVFLPMFVAELGFSTSE------WLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVG 297 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhH------HHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHH
Confidence 34444444555555555566778888899999888 899999999999999999999999999988764 33333
Q ss_pred HHHHHHHHh-----ccchHHHHHHHHHHHHhhcchhhHHHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccc
Q 013453 122 VVIFNTLFG-----LSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (442)
Q Consensus 122 ~~i~~~~~~-----~a~~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 196 (442)
..+..+... ..++.+..++..++.|++.+...+....+.|.. +++|++++|+.+....+|..++|.+++.+.+
T Consensus 298 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~- 375 (402)
T TIGR00897 298 CGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYVPLAAVFPTLA-PKHKGAAMSVLNLSAGLSAFLAPAIAVLFIG- 375 (402)
T ss_pred HHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 333333322 234677777888899988766666556667764 4689999999999999999999999999998
Q ss_pred cccCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhc
Q 013453 197 AEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWL 236 (442)
Q Consensus 197 ~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (442)
..+++..+.+.+++.++..+...++
T Consensus 376 ---------------~~g~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 376 ---------------FFGAIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred ---------------hcchHHHHHHHHHHHHHHHHHHHHh
Confidence 4455566677776666665555544
No 141
>PRK03699 putative transporter; Provisional
Probab=99.48 E-value=1.1e-12 Score=122.64 Aligned_cols=147 Identities=12% Similarity=0.119 Sum_probs=117.6
Q ss_pred hHHHHHHHHHHhHhcchhhchhHHHHH-HHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHH
Q 013453 42 ELFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (442)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~ 120 (442)
.++...+..++.......+....|.+. +++|.+..+ .+++.+.+.++..++.++.|+++||++||+.+.....
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~------~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~ 279 (394)
T PRK03699 206 GVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLED------AGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAG 279 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHH------hhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHH
Confidence 344444445554444555566778777 567999988 9999999999999999999999999999999988887
Q ss_pred HHHHHHHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhcc
Q 013453 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 121 ~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (442)
+..+...+....++.+.+.+..++.|++.+...+ ..++..|..| +++++..+.......+|..++|.+.|++.+
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~ 354 (394)
T PRK03699 280 LALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVA 354 (394)
T ss_pred HHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 7777777777777887777788888987776666 4777777765 456778888888999999999999999998
No 142
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.46 E-value=1.8e-12 Score=125.30 Aligned_cols=130 Identities=20% Similarity=0.246 Sum_probs=104.0
Q ss_pred hchhHHHHH-HHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhcc--chHH
Q 013453 60 LFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS--VNFW 136 (442)
Q Consensus 60 ~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a--~~~~ 136 (442)
....+|.+. +++|.+..+ .+++.+...++..++.++.|+++||+|||+++..+.++..+..++.... .+.+
T Consensus 294 ~~~~lp~~l~~~~g~~~~~------~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (496)
T PRK03893 294 IQALLPTYLKTDLGYDPHT------VANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVW 367 (496)
T ss_pred HHHHHHHHHHhhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHH
Confidence 445677777 588999988 9999999999999999999999999999999988877766665544332 3444
Q ss_pred HHHHHHHHHHh-hcchhhHHHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhcc
Q 013453 137 MAVLTRFLLGS-LNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 137 ~l~~~r~l~G~-~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (442)
.+.+..++.+. +.+......+++.|.+|+++|++.+++.+....+|..+||.++|.+.+
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~ 427 (496)
T PRK03893 368 VLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQ 427 (496)
T ss_pred HHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhc
Confidence 44455555544 334333357889999999999999999999999999999999999998
No 143
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.46 E-value=2e-12 Score=121.09 Aligned_cols=148 Identities=13% Similarity=0.085 Sum_probs=107.0
Q ss_pred hhHHHHHHHHHHhHhcchhhchhHHHHH-HHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchh--hH-
Q 013453 41 TELFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPV--II- 116 (442)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~--~~- 116 (442)
++++...+..++............|.+. +++|.+..+ .+++.+...++..++.++.|+++||+|||+. ..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 288 (399)
T TIGR00893 215 RRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILE------AGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFA 288 (399)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHH------hhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHH
Confidence 3445555566666666666667777665 557888888 8999999999999999999999999999961 11
Q ss_pred -----HHHHHHHHHHHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhh
Q 013453 117 -----MGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG 190 (442)
Q Consensus 117 -----~~~~~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 190 (442)
.+.++..+........++.+..+....+.+.+.+ ..+ ..+++.|.+|+++|++..++.+....+|..++|.+.
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~ 367 (399)
T TIGR00893 289 RKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVI 367 (399)
T ss_pred HHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHh
Confidence 1111112222222223344544444445455555 555 589999999999999999999999999999999999
Q ss_pred hhhcc
Q 013453 191 GFLAQ 195 (442)
Q Consensus 191 ~~l~~ 195 (442)
+.+.+
T Consensus 368 g~l~~ 372 (399)
T TIGR00893 368 GAIAA 372 (399)
T ss_pred hhhcc
Confidence 99998
No 144
>PRK03545 putative arabinose transporter; Provisional
Probab=99.44 E-value=3.9e-12 Score=118.80 Aligned_cols=145 Identities=13% Similarity=0.135 Sum_probs=112.4
Q ss_pred HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHH-HHHhccchHHHHHHHHH
Q 013453 65 YFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFN-TLFGLSVNFWMAVLTRF 143 (442)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~-~~~~~a~~~~~l~~~r~ 143 (442)
|.+.+++|.+..+ .+++.+...++..++.++.|+++||+|||+... +..+..++. .+....++.+.+.+..+
T Consensus 230 ~~l~~~~g~s~~~------~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~ 302 (390)
T PRK03545 230 PFVQQVAGLSENF------ATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLI-AIALLLVCLLLLLPAANSEWHLSVLSI 302 (390)
T ss_pred HHHHHhcCCCccH------HHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH-HHHHHHHHHHHHHHHhchHHHHHHHHH
Confidence 4445557888888 999999999999999999999999999887544 444444443 34455678888888889
Q ss_pred HHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCcccccccccCCcChhHHHHH
Q 013453 144 LLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCI 222 (442)
Q Consensus 144 l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~ 222 (442)
+.|++.+...+ ..+.+.|..| ++|++++++.+....+|..+||+++|.+.+ ..+++..+...
T Consensus 303 l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~----------------~~g~~~~~~~~ 365 (390)
T PRK03545 303 FWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSL----------------HLGLSSIGYVG 365 (390)
T ss_pred HHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------------ccChhHHHHHH
Confidence 99998766666 4777778766 689999999999999999999999999998 44555555777
Q ss_pred HHHHHHHHHHH
Q 013453 223 SLFAFGVTIAA 233 (442)
Q Consensus 223 ~~~~~~~~~~~ 233 (442)
+++.++..+..
T Consensus 366 ~~~~~~~~~~~ 376 (390)
T PRK03545 366 AALALAALVWS 376 (390)
T ss_pred HHHHHHHHHHH
Confidence 76666655443
No 145
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.44 E-value=8.8e-13 Score=123.43 Aligned_cols=147 Identities=20% Similarity=0.213 Sum_probs=112.9
Q ss_pred HHHHHHHHHHhHhcchhhchhHHHHH-HHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHH
Q 013453 43 LFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (442)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~ 121 (442)
++......+.............|.+. +++|.++.+ .+.+.+...++..++.++.|+++||+|||+.+.....+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~ 294 (394)
T TIGR00883 221 FLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANS------ALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVL 294 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhH------HHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHH
Confidence 44444445555555555566677776 678888888 89999999999999999999999999999988765544
Q ss_pred HHHHH--HHHhc--cchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhh-hhHhhhhHHHHHHHhhhhhcc
Q 013453 122 VVIFN--TLFGL--SVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLST-VSTAWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 122 ~~i~~--~~~~~--a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~-~~~~~~~g~~~g~~~~~~l~~ 195 (442)
..+.. +...+ .++.+.+++..++.|++.+...+ ..+++.|.+|+++|+++.++ .+.+..+|..++|.+++.+.+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~ 374 (394)
T TIGR00883 295 AALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVA 374 (394)
T ss_pred HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHH
Confidence 43333 22222 35677777788888988777766 59999999999999999997 456677899999999999998
No 146
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.43 E-value=4.9e-12 Score=117.72 Aligned_cols=146 Identities=15% Similarity=0.129 Sum_probs=119.5
Q ss_pred HHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHH
Q 013453 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (442)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~ 122 (442)
++......++............|.+.+|.|.++.+ .|.+.+...++..+..++.|++.||+|+|+.+..+.+..
T Consensus 207 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~ 280 (382)
T PRK11128 207 VWRFLLCVSLLQGSHAAYYGFSAIYWQAAGYSAST------IGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICG 280 (382)
T ss_pred HHHHHHHHHHHHHHhHhHHHHHHHHHHHCCCCHhH------HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence 34333434444444444555667777889999888 999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhh-HhhhhHHHHHHHhhhhhcc
Q 013453 123 VIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVS-TAWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 123 ~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~ 195 (442)
++..++.+.+++.+.+++..++.|++.+...+ ...++.+. +++++++..+..+ ...++|..+||.++|.+.+
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~ 354 (382)
T PRK11128 281 VVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQ 354 (382)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888888899999999999999999888777 47777776 5666788888775 6667888999999999998
No 147
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.43 E-value=4.2e-12 Score=121.40 Aligned_cols=148 Identities=16% Similarity=0.163 Sum_probs=110.8
Q ss_pred hHHHHHHHHHHhHhcchhhchhHHHHH-HHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHH
Q 013453 42 ELFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (442)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~ 120 (442)
.++..++..++...........+|.+. +++|.+..+ .++..+...++..++.+++|+++||+|||+.+.....
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~------a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~ 332 (467)
T PRK09556 259 VIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKED------AINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIA 332 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHH
Confidence 344455555555555455566677665 668999988 8999999999999999999999999999988776554
Q ss_pred HHHHHHH--HHhccchHHHHHHHHHHHHhhc-chhhHHHHHhhhhccccchhhhhhhhhHhhhh-HHHHHHHhhhhhcc
Q 013453 121 SVVIFNT--LFGLSVNFWMAVLTRFLLGSLN-GLLGPIKAYACEIFREEHQALGLSTVSTAWGI-GLIIGPALGGFLAQ 195 (442)
Q Consensus 121 ~~~i~~~--~~~~a~~~~~l~~~r~l~G~~~-g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~~ 195 (442)
+..++.. .....++.+.+.+.+++.|++. +..........|.+|+++|+++.|+.+....+ |..++|.+.|.+.+
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~ 411 (467)
T PRK09556 333 LALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIAD 411 (467)
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhc
Confidence 4443332 2233456777778888888643 33333356777999999999999999988886 77999999999987
No 148
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.39 E-value=1.1e-09 Score=99.03 Aligned_cols=342 Identities=14% Similarity=0.092 Sum_probs=203.5
Q ss_pred HHHHHH-hcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhccchHHHHHHHHH
Q 013453 65 YFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRF 143 (442)
Q Consensus 65 ~~~~~~-~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~r~ 143 (442)
|.+.+. .|.+++|- ..-+.-+..-.+....++...+.|..+.|++++++.+...+...+.-+.++...+-+..+
T Consensus 28 ~yL~~~~kn~T~~qv-----~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~ 102 (412)
T PF01770_consen 28 PYLTGPDKNFTEEQV-----NNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQF 102 (412)
T ss_pred HHHcCCccCCCHHHH-----HHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHH
Confidence 444443 67777662 345556666777888899999999999999999999999999999999999999999999
Q ss_pred HHHhhcchhhHHHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCcccccccccCCcChhHHHHHH
Q 013453 144 LLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCIS 223 (442)
Q Consensus 144 l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~ 223 (442)
.-|++.+.-..-.+++=...|+++-.++.+...++..+|..++.++|..+.... ...++....+..
T Consensus 103 ~yg~~~a~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~--------------~~sy~~L~~isl 168 (412)
T PF01770_consen 103 FYGLATAAEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFG--------------GVSYFQLNYISL 168 (412)
T ss_pred HHHHHHHHHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------------CCCHHHHHHHHH
Confidence 999998876666888888889888889999999999999999999999887621 444555555555
Q ss_pred HHHHHHHHHHhhccccCCC---CCCCCccch---hhhhhhhhhhhhh---hhhhc-----------ccccccccccccch
Q 013453 224 LFAFGVTIAAFWLPETLHR---HNDDDDSCD---VSYDALESASAEV---KEEEG-----------REATPKKSLLKNWP 283 (442)
Q Consensus 224 ~~~~~~~~~~~~~~e~~~~---~~~~~~~~~---~~~~~~~~~~~~~---~~~~~-----------~~~~~~~~~~~~~~ 283 (442)
....++++..+++|.+++. ++.++++.+ ...++.++..++. ++.++ .-.+..++..++|.
T Consensus 169 ~~~~~a~~~~~fLP~~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ 248 (412)
T PF01770_consen 169 ASVSLALLIALFLPMPKRSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPR 248 (412)
T ss_pred HHHHHHHHHHHHcCCCCcccceeccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCch
Confidence 5555556666778876542 111111000 0000000000000 00000 01123445567777
Q ss_pred hHHHHHHHHHHHHHHhhHHHHHH-HHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHH
Q 013453 284 LMSSIIVYCVFSLHDMAYSEIFS-LWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGV 362 (442)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (442)
++.-.+...+.........++.. +|-.. ..-+-.....|.+-+...+.+.++.+ ..+.+..+..+...+.++..
T Consensus 249 ll~WSlWWa~atcgy~qv~nYvQ~LW~~v----~~~~~~~vYNG~VeA~~tllgA~~al-~~g~v~~~w~~~~~l~l~~~ 323 (412)
T PF01770_consen 249 LLLWSLWWAFATCGYYQVINYVQSLWDTV----PPSDNESVYNGAVEAASTLLGAIAAL-LAGYVKVNWDRWGELALGVF 323 (412)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHhc----CCCCCCcccchHHHHHHHHHHHHHHH-HHhHhhcchHHHHHHHHHHH
Confidence 65555544444444433333332 23222 11122344456666666666666666 44555444444443333332
Q ss_pred HH--HHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhc
Q 013453 363 LT--IPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGP 436 (442)
Q Consensus 363 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp 436 (442)
.. +..+.++.+.. ..|.......++.. ......+....-++.....+.-|.+.|+++++..+-..+-.
T Consensus 324 S~l~a~~L~lm~~t~-----~Iwv~Y~~yIif~~-~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf~Al~LQtilT 393 (412)
T PF01770_consen 324 SLLQAGLLFLMSFTG-----NIWVCYAGYIIFRS-LYMFLITIASFQIAKNLSEERYALVFGINTFVALVLQTILT 393 (412)
T ss_pred HHHHHHHHHHHHHhh-----HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhccccceeeeeeeHHHHHHHHHHheE
Confidence 22 22222222221 23332222222233 33344455555555567778889999998887766555433
No 149
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=99.39 E-value=6.2e-09 Score=95.86 Aligned_cols=363 Identities=13% Similarity=0.102 Sum_probs=204.8
Q ss_pred hHHHHHHHHHHhHhcchhhchhHHHHHHHhcccc-cchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHH
Q 013453 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAK-REEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (442)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~ 120 (442)
..+.++...++...+.-+.....|.+..+...+. -. .+...-.-.+...+.++..|.+.||..|.++...+++
T Consensus 3 ~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~------~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~ 76 (432)
T PF06963_consen 3 ALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLP------VSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLV 76 (432)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHH------HHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHH
Confidence 4556778888888888888888888887775432 22 4444445566778888999999999999998877665
Q ss_pred HHHHHHHHHhc------c--c----hHHH---HHHHHHHHHhhcchhhHH--HHHhhhhc------cccchhhhhhhhhH
Q 013453 121 SVVIFNTLFGL------S--V----NFWM---AVLTRFLLGSLNGLLGPI--KAYACEIF------REEHQALGLSTVST 177 (442)
Q Consensus 121 ~~~i~~~~~~~------a--~----~~~~---l~~~r~l~G~~~g~~~~~--~~~i~~~~------~~~~r~~~~~~~~~ 177 (442)
.--++..+.+. . + +-+. +++.-.+.|.-.-....+ .+.=.||. +++.+.+..+...-
T Consensus 77 ~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRR 156 (432)
T PF06963_consen 77 VQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRR 156 (432)
T ss_pred HHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHH
Confidence 44332222211 1 1 1122 222222222222222222 22223443 34455566666666
Q ss_pred hhhhHHHHHHHhhhhhccccccCCCcccccccccCCcChhHHHHHHHHHHHHHHH-Hhhc----cccCCCCCCC---Ccc
Q 013453 178 AWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWL----PETLHRHNDD---DDS 249 (442)
Q Consensus 178 ~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~e~~~~~~~~---~~~ 249 (442)
.--+.-+++|++.|.+.+ ..+......+.+...++.+.. ++++ ...|.-..++ +++
T Consensus 157 IDL~ckllaPl~vG~l~t----------------~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~ 220 (432)
T PF06963_consen 157 IDLFCKLLAPLFVGLLMT----------------FASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSESE 220 (432)
T ss_pred HHHHHHHHHHHHHHHHhh----------------ccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCcccc
Confidence 666889999999999987 344444445555555554332 2221 1122111111 111
Q ss_pred chhhhh------hhhhhhhhhhhhhcccccccccccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChh
Q 013453 250 CDVSYD------ALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQ 323 (442)
Q Consensus 250 ~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (442)
.++..+ ......+...+.-++....++..++++.+... +...+.++...++......|+.. .|+++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~vflas-~alalLY~TVLsf~~lmt~yl~~------~G~s~~ 293 (432)
T PF06963_consen 221 SSSDEESSSESSSDPSILKRLWNPLRTIIRGWRTYFRQPVFLAS-FALALLYFTVLSFGGLMTAYLKS------QGYSPS 293 (432)
T ss_pred ccccccccccccchhhHHHHHHHHHHHHhccHHHHHhCHHHHHH-HHHHHHHHHHhcCcHHHHHHHHH------CCCCHH
Confidence 000000 00000001111112234556677777755544 44444444456677777777664 399999
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhhch---hhHHHHHHHHH-HHHHHHHH
Q 013453 324 MVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGF---GLAFLLNCASV-VKNLLSVS 399 (442)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~ 399 (442)
..|.+-+...+.++.+.. +..++.+|+|..+.-.++......++.+....-..++. ......++.++ ..=.+--+
T Consensus 294 ~igi~R~~gav~Gl~gT~-~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~ 372 (432)
T PF06963_consen 294 VIGIFRGLGAVFGLLGTW-VYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWS 372 (432)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHh
Confidence 999999999999999988 88889999998887777766555544333222111111 11111222222 11122223
Q ss_pred HHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhh
Q 013453 400 IITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAA 434 (442)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~ 434 (442)
.-.....+++|.+|+++||+.+|+.+..+++...+
T Consensus 373 fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll 407 (432)
T PF06963_consen 373 FDLAVTQIMQENVPESERGAVSGVQNSLQSLFELL 407 (432)
T ss_pred hhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHH
Confidence 33456777889999999999999999988876544
No 150
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.38 E-value=6.8e-12 Score=117.57 Aligned_cols=347 Identities=16% Similarity=0.188 Sum_probs=197.9
Q ss_pred chhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhccc---C--CchhhHHHHHHHHHHHHHHhcc---
Q 013453 61 FPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY---G--RKPVIIMGTASVVIFNTLFGLS--- 132 (442)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~---G--rr~~~~~~~~~~~i~~~~~~~a--- 132 (442)
.+..|.+.+++|+++.+ ...+.+...+.. ..-+++|.++|.+ | ||+-++++.++..++.+..+..
T Consensus 10 ~~~~~~l~~~l~ls~~~------~~~~~~~~~lPw-~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~ 82 (433)
T PF03092_consen 10 LAIYPFLKDDLGLSPAQ------LQRLSSLASLPW-SIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPAS 82 (433)
T ss_pred HHHHHHHHHHcCCCHHH------HHHHHHHHhCch-HHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccc
Confidence 45668889999999999 888888888876 4567899999976 3 4555566777665555555543
Q ss_pred -chHHHHHHHHHHHHhhcchhhH-HHHHhhhhcc--ccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCcccccc
Q 013453 133 -VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFR--EEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSES 208 (442)
Q Consensus 133 -~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~--~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~ 208 (442)
.+.....+.-++..+|...... +-+++.|... +++|+...+.......+|.+++..++|.+.+ ..+.+.
T Consensus 83 ~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~-------~~~~~~ 155 (433)
T PF03092_consen 83 ESSAAIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLD-------SFGPQG 155 (433)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhh-------cCCCeE
Confidence 3566666666777788888777 5888888874 3347888888899999999999999999988 344444
Q ss_pred cccCCcChhHHHHHHHHHHHHHHH-HhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhcccccccccccccchhHHH
Q 013453 209 LFGKFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSS 287 (442)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (442)
.+ .+.+.+..+..+. .+..+| ++..+.. +..... ++. .+......++.....++.++.+.++..
T Consensus 156 ~f---------~i~~~~~~l~~~~~~~~~~e-~~~~~~~-~~~~~~-~~~---~~~~~~~~~~~~~~l~~~~~~~~i~~~ 220 (433)
T PF03092_consen 156 VF---------LISAALPLLMLIVALFLLEE-RKVRPAD-EVFSFG-KEE---VPCLFGSFREQLSELWRALQQRAIWQP 220 (433)
T ss_pred Ee---------hHHHHHHHHHHHHHHHhhhh-ccccccc-hhhccc-ccc---cchhhHHHHHHHHHHHHHHhhhHHHHH
Confidence 43 5555555554443 444444 2111110 000000 000 000000011122344566777777766
Q ss_pred HH-HHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHHHHHH
Q 013453 288 II-VYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIP 366 (442)
Q Consensus 288 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (442)
.+ ..+++......... ...|...... .+.++++...+.+..+..++.+++..+...++.++ .-|++.....++..+
T Consensus 221 ~~~~~~~~~~~~~~~~a-~~fy~~~~~~-~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~-~~R~~~~~t~~~~~~ 297 (433)
T PF03092_consen 221 ILFFIFFFNLPPSISSA-SSFYFQTDAL-GGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNW-SWRRIFVVTTLVSVL 297 (433)
T ss_pred HHHHHHHHHhccCCCCc-cEEEEEeccc-cccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHH
Confidence 66 33222221111111 0112221111 13458999999988777778888777444444443 555555555444433
Q ss_pred HHHHHH-HHHHhh---c-hhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhcccCC
Q 013453 367 LLTSYP-YIAMLS---G-FGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGG 440 (442)
Q Consensus 367 ~~~~~~-~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i~G 440 (442)
..+.-. .....+ + +..+. ...-..+....+....-....+.+|..|+..-|+..++..++.++|..++..++.
T Consensus 298 ~~l~~~~lv~~~n~~~Gi~d~~f-~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~ 375 (433)
T PF03092_consen 298 ASLFDLLLVTRWNLDLGIPDQWF-ALGDTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGA 375 (433)
T ss_pred HhcccEEEEEEEeeeeCcCCeEE-EEEhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 322110 000000 0 00111 1111122222222333344566788899999999999999999999988776543
No 151
>PRK09952 shikimate transporter; Provisional
Probab=99.38 E-value=2.7e-11 Score=114.77 Aligned_cols=166 Identities=15% Similarity=0.145 Sum_probs=115.1
Q ss_pred hHhcchhhchhHHHH-HHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhc
Q 013453 53 TALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL 131 (442)
Q Consensus 53 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~ 131 (442)
............|.+ .+++|.+... ...+.....+...++.++.|+++||+|||++++.+.++..++.+....
T Consensus 262 ~~~~~~~~~~~~~~y~~~~~g~s~~~------~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~ 335 (438)
T PRK09952 262 ELLTMYIVTAFALNYSTQNLGLPREL------FLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFM 335 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHH
Confidence 333344444555555 4567877765 555666667777888999999999999999998887766554433322
Q ss_pred ---c-chHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhh-HhhhhHHHHHHHhhhhhccccccCCCccc
Q 013453 132 ---S-VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVS-TAWGIGLIIGPALGGFLAQPAEKYPNLFS 205 (442)
Q Consensus 132 ---a-~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~~~~~~~~g 205 (442)
. ++.+.+++..++.+++.+...+ ..++++|.+|++.|+.+.++.+ .+..+|..++|.+.+++.+..
T Consensus 336 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~-------- 407 (438)
T PRK09952 336 ALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYF-------- 407 (438)
T ss_pred HHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc--------
Confidence 2 2344445556677787777666 5899999999999998888754 445589999999999998721
Q ss_pred ccccccCCcChhHHHHHHHHHHHHHHHHhhccc
Q 013453 206 SESLFGKFPYFLPCLCISLFAFGVTIAAFWLPE 238 (442)
Q Consensus 206 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 238 (442)
..+|+.++...+++.++..+..+.++|
T Consensus 408 ------~~~~~~~~~~~~~~~~i~~v~~~~~~~ 434 (438)
T PRK09952 408 ------GGSWHSVAIYLLAGCLISAMTALLMKD 434 (438)
T ss_pred ------CCCchHHHHHHHHHHHHHHHHHHHccc
Confidence 123555666676677766666666665
No 152
>TIGR00895 2A0115 benzoate transport.
Probab=99.38 E-value=5e-12 Score=118.55 Aligned_cols=143 Identities=20% Similarity=0.274 Sum_probs=113.5
Q ss_pred HHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHH
Q 013453 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (442)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i 124 (442)
.++...+.............|.+.+++|.+..+ .+++.+...++..++.++.|+++||+|||+.+....+....
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 327 (398)
T TIGR00895 254 LLWLLYFMLLVGVYFLTNWLPKLMVELGFSLSL------AATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVF 327 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHH
Confidence 334444444445555566678888899999888 99999999999999999999999999999555444443333
Q ss_pred HHHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhh
Q 013453 125 FNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (442)
Q Consensus 125 ~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 193 (442)
..++....++.+.+++..++.|++.+...+ ..+++.|.+|+++|++++++......+|..+||.++|++
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 328 AVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 333333356777788888999999888777 589999999999999999999999999999999999876
No 153
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.37 E-value=2.8e-11 Score=113.99 Aligned_cols=179 Identities=13% Similarity=0.169 Sum_probs=141.3
Q ss_pred hhHHHHHHHHHHhHhcchhhchhHHHHH-HHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCc--hhhHH
Q 013453 41 TELFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRK--PVIIM 117 (442)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr--~~~~~ 117 (442)
+.+....++.++..-+.+.+......+. +++|.+..+ ...+.-+..+...+|++++|++.||+|.| ++++.
T Consensus 281 ~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~------l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~ 354 (477)
T PF11700_consen 281 RQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQ------LIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLI 354 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHH
Confidence 3344445555555445555555555554 589999999 88888999999999999999999999999 89999
Q ss_pred HHHHHHHHHHHHhc--------cchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHH
Q 013453 118 GTASVVIFNTLFGL--------SVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPA 188 (442)
Q Consensus 118 ~~~~~~i~~~~~~~--------a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 188 (442)
+++++.+..+...+ .++.+.+.+.-++.|+..|...+ ..++.+|..|+++.+..+|++....-..+.+||+
T Consensus 355 ~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPl 434 (477)
T PF11700_consen 355 SLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPL 434 (477)
T ss_pred HHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHH
Confidence 88888666666555 67888899999999999999888 5999999999999999999999999999999999
Q ss_pred hhhhhccccccCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhccccC
Q 013453 189 LGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETL 240 (442)
Q Consensus 189 ~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 240 (442)
+-+.+.+..+ ..|..+....++.++.+++++++++++
T Consensus 435 l~g~i~~~tg---------------~~r~g~~~l~~lf~~gl~ll~~v~~~~ 471 (477)
T PF11700_consen 435 LFGLITDATG---------------SQRYGFLFLLVLFLIGLILLFFVDVEK 471 (477)
T ss_pred HHHHHHHHhC---------------CchhHHHHHHHHHHHHHHHHhhccchh
Confidence 9999998321 244555666666666666666666543
No 154
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.37 E-value=1.5e-11 Score=118.25 Aligned_cols=172 Identities=17% Similarity=0.172 Sum_probs=123.3
Q ss_pred HHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHH
Q 013453 47 WIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFN 126 (442)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~ 126 (442)
.+..+.............|.+.+++|.+..+ .++......++..++.++.|+++||+|||+.+.++.++..++.
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 363 (481)
T TIGR00879 290 VLQWFQQFTGINAIMYYSPTIFENAGVSTDH------AFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICL 363 (481)
T ss_pred HHHHHHHHhCCeehHHHHHHHHHHcCCCchH------HHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 3334444444445556678888899999877 8899999999999999999999999999999999988887777
Q ss_pred HHHhc-----cc------hHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhc
Q 013453 127 TLFGL-----SV------NFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (442)
Q Consensus 127 ~~~~~-----a~------~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 194 (442)
++.++ .+ +...+....++.+.......+ ...++.|.+|+++|++++++.+....+|.+++|.+.+.+.
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~ 443 (481)
T TIGR00879 364 FVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTML 443 (481)
T ss_pred HHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66652 11 222333333333332223335 4778899999999999999999999999999999999998
Q ss_pred cccccCCCcccccccccCCcChhHHHHHHHHHHHHHHH-HhhccccC
Q 013453 195 QPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPETL 240 (442)
Q Consensus 195 ~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~ 240 (442)
+ ..||+..| .+.++++++..+. .++.||++
T Consensus 444 ~-------~~~~~~~f---------~~~~~~~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 444 E-------SIGVGGVF---------IFFGGLNVLGLIFVYFFLPETK 474 (481)
T ss_pred H-------hcCcccee---------hhHHHHHHHHHHHHheecccCC
Confidence 7 44554444 5566665555443 44556644
No 155
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.37 E-value=1.1e-11 Score=117.97 Aligned_cols=170 Identities=14% Similarity=0.067 Sum_probs=109.7
Q ss_pred HHHHHHHHHHhHhcchhhchhHHHHHHH-hcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhccc--CCchhhH-HH
Q 013453 43 LFSIWIIVLCTALPISSLFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY--GRKPVII-MG 118 (442)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~--Grr~~~~-~~ 118 (442)
++...+..++...........+|.+.++ .|.+..+ .++....+.++..++.++.|+++||+ +||+... ..
T Consensus 255 ~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~------~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~ 328 (452)
T PRK11273 255 LWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDK------SSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFF 328 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHH
Confidence 4444444444444445556677877765 6888888 88999999999999999999999999 5554332 22
Q ss_pred HHHHHHHHHHHhc--cchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHH-HHHHhhhhhc
Q 013453 119 TASVVIFNTLFGL--SVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLI-IGPALGGFLA 194 (442)
Q Consensus 119 ~~~~~i~~~~~~~--a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~-~g~~~~~~l~ 194 (442)
..+..++.+...+ ..+.+...+..++.|.+...... ...+..|.+|+++|+++.|+.+....+|.. .+|.+.+.+.
T Consensus 329 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~ 408 (452)
T PRK11273 329 MTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTV 408 (452)
T ss_pred HHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHH
Confidence 2333333332222 33444444554555553222222 345678999999999999999988888765 5899999999
Q ss_pred cccccCCCcccccccccCCcChhHHHHHHHHHHHHHHHHh
Q 013453 195 QPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAF 234 (442)
Q Consensus 195 ~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (442)
+ .+| |+..+.+.+..+++.++...
T Consensus 409 ~-------~~g---------~~~~f~~~~~~~~~~~~~~~ 432 (452)
T PRK11273 409 D-------FFG---------WDGGFMVMIGGSILAVILLI 432 (452)
T ss_pred H-------Hhc---------chHHHHHHHHHHHHHHHHHH
Confidence 8 333 44444666666665544433
No 156
>PRK10504 putative transporter; Provisional
Probab=99.36 E-value=1.8e-11 Score=117.49 Aligned_cols=148 Identities=16% Similarity=0.187 Sum_probs=117.9
Q ss_pred hHHHHHHHHHHhHhcchhhchhHHHHHH-HhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHH
Q 013453 42 ELFSIWIIVLCTALPISSLFPFLYFMIK-DFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (442)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~ 120 (442)
.+.......++............|.+.+ .+|.++.+ .+++.....++..++.++.|++.||+|||+++..+..
T Consensus 262 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~------~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~ 335 (471)
T PRK10504 262 TFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFH------AGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTL 335 (471)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHH
Confidence 3444444555555555555556677766 47888877 8999999999999999999999999999999999988
Q ss_pred HHHHHHHHHhcc---chHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhcc
Q 013453 121 SVVIFNTLFGLS---VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 121 ~~~i~~~~~~~a---~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (442)
+..+...+..+. ++.+.+.+..++.|++.+...+ ...++.+..|+++|+.+.++.+....+|..+|+.+++.+.+
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~ 414 (471)
T PRK10504 336 GLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLG 414 (471)
T ss_pred HHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888777666553 3444455667788888887766 58888999999999999999999999999999999999887
No 157
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.36 E-value=5e-12 Score=117.04 Aligned_cols=128 Identities=16% Similarity=0.187 Sum_probs=115.7
Q ss_pred hhHHHHHHH-hcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhccch-HHHHH
Q 013453 62 PFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVN-FWMAV 139 (442)
Q Consensus 62 ~~~~~~~~~-~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a~~-~~~l~ 139 (442)
...|.+.++ +|.+..+ .+++.+...++..++.++.+++.||+|||+.+..+..+.+++..+..+.++ .+.++
T Consensus 232 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTH------YGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFL 305 (365)
T ss_pred HHhHHHHHHHhCCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHH
Confidence 566777765 8988888 999999999999999999999999999999999888888888888877774 88888
Q ss_pred HHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhcc
Q 013453 140 LTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 140 ~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (442)
+..++.|++.+...+ ..+++.|..|+++|++..++.+....+|..++|.++|.+.+
T Consensus 306 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~ 362 (365)
T TIGR00900 306 VLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLAD 362 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999888887 48999999999999999999999999999999999999987
No 158
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.36 E-value=2.7e-11 Score=114.64 Aligned_cols=169 Identities=13% Similarity=0.044 Sum_probs=109.6
Q ss_pred HHHHHHHHHHhHhcchhhchhHHHHH-HHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhccc--CCchhh-HH-
Q 013453 43 LFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY--GRKPVI-IM- 117 (442)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~--Grr~~~-~~- 117 (442)
++.+.+..+............+|.+. +++|.+..+ .+...+.+.++..++.++.|+++||+ ++|+.. ..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~------a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~ 318 (434)
T PRK11663 245 IWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVT------ANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIF 318 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHH------HHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHH
Confidence 34444444444444445556667776 568999888 89999999999999999999999998 333332 22
Q ss_pred --HHHHHHHHHHHHhccchHHHHHHHHHHHHhhcchhh-HHHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhc
Q 013453 118 --GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLG-PIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (442)
Q Consensus 118 --~~~~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 194 (442)
+.....+...... ..+.....+..+..|++..... .....+.|.+|+++|++++|+.+....+|..++|.+.+++.
T Consensus 319 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~ 397 (434)
T PRK11663 319 AAGILLSVGSLWLMP-FASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVL 397 (434)
T ss_pred HHHHHHHHHHHHHcc-cccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHH
Confidence 1121211112222 2333344444444554322222 23456789999999999999999999999999999999999
Q ss_pred cccccCCCcccccccccCCcChhHHHHHHHHHHHHHHHHh
Q 013453 195 QPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAF 234 (442)
Q Consensus 195 ~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (442)
+ ..+|...+...++++++..+...
T Consensus 398 ~----------------~~g~~~~f~~~~~~~~~~~~~~~ 421 (434)
T PRK11663 398 E----------------IWHWTGFFVVISIAAGISALLLL 421 (434)
T ss_pred H----------------hcccHHHHHHHHHHHHHHHHHHH
Confidence 8 33445555666666665544333
No 159
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.35 E-value=1.3e-11 Score=116.81 Aligned_cols=130 Identities=19% Similarity=0.229 Sum_probs=99.6
Q ss_pred hchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhccchHHHHH
Q 013453 60 LFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAV 139 (442)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a~~~~~l~ 139 (442)
+...+|.+.++.|.+..+ .+.+.+...++..++.++.|++.||+|||+.+..+.++..+..+.....++.....
T Consensus 250 ~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (426)
T PRK12307 250 IFGLLPTYLAGEGFDTGV------VSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLL 323 (426)
T ss_pred HHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHH
Confidence 445678888888888877 89999999999999999999999999999999988877766655444332211122
Q ss_pred HHHHHHHh--hcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhcc
Q 013453 140 LTRFLLGS--LNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 140 ~~r~l~G~--~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (442)
+.-++.|+ +.....+ ...++.|.+|+++|++++|+......+|..++|.+.+++.+
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~ 382 (426)
T PRK12307 324 LGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGI 382 (426)
T ss_pred HHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHH
Confidence 22233333 2222233 46788999999999999999999999999999999999987
No 160
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.35 E-value=4.3e-11 Score=113.96 Aligned_cols=136 Identities=18% Similarity=0.271 Sum_probs=121.8
Q ss_pred HhcchhhchhHHHHH-HHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhcc
Q 013453 54 ALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS 132 (442)
Q Consensus 54 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a 132 (442)
.+....+...+|.+. +++|.+... .|++.+++.+|..+++++.+++.+|+++++.+..+.++++++.+..+++
T Consensus 231 ~l~~~a~~aLlPl~a~~~l~~~a~~------yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~ 304 (524)
T PF05977_consen 231 NLFASAVWALLPLFARDVLGGGASG------YGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALS 304 (524)
T ss_pred HHhhhHHHHhhhHHHHHHhCCcHHH------HHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcc
Confidence 333344455678776 568888888 9999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhcc
Q 013453 133 VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 133 ~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (442)
++.+..++.-++.|++.....+ ..+.+.+..|++.|||.++++++....+..+|..+.|.+.+
T Consensus 305 ~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~ 368 (524)
T PF05977_consen 305 PSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLAD 368 (524)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998777766 58899999999999999999999999999999999999998
No 161
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.34 E-value=5.1e-11 Score=106.94 Aligned_cols=172 Identities=15% Similarity=0.150 Sum_probs=131.3
Q ss_pred hhhHHHHHHHHHHhHhcchhhchhH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHH
Q 013453 40 ITELFSIWIIVLCTALPISSLFPFL-YFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (442)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~ 118 (442)
++.++......++...+......++ |.+.+..|.+.+. ++++.-+|.++..++.++.|+++|| +.|+.+...
T Consensus 210 ~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~------vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~ 282 (394)
T COG2814 210 RPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSA------VSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAA 282 (394)
T ss_pred CchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhH------HHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHH
Confidence 3445555555666555555555554 7777788999999 9999999999999999999999999 999999988
Q ss_pred HHHHHHHHHHHhc-cchHHHHHHHHHHHHhhcchhhHH-HHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccc
Q 013453 119 TASVVIFNTLFGL-SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (442)
Q Consensus 119 ~~~~~i~~~~~~~-a~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 196 (442)
..+..+..+...+ .++.+..++.-++.|+..+..... ...+++ ..+|.+..+.++.....++|..+|..+||.+.+
T Consensus 283 ~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~- 360 (394)
T COG2814 283 LLLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLD- 360 (394)
T ss_pred HHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 7777777766655 455666666667766665554443 555666 456889999999999999999999999999999
Q ss_pred cccCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhh
Q 013453 197 AEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFW 235 (442)
Q Consensus 197 ~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (442)
++++....+..+++.+..+...+.
T Consensus 361 ---------------~~g~~~~~~~~a~l~~~a~~~~~~ 384 (394)
T COG2814 361 ---------------ALGYAATGWVGAALLLLALLLALL 384 (394)
T ss_pred ---------------hhchHHHHHHHHHHHHHHHHHHHH
Confidence 556666667777777776655443
No 162
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.34 E-value=1.1e-11 Score=116.57 Aligned_cols=130 Identities=18% Similarity=0.238 Sum_probs=105.6
Q ss_pred hchhHHHH-HHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHH-HHHhccchHHH
Q 013453 60 LFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFN-TLFGLSVNFWM 137 (442)
Q Consensus 60 ~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~-~~~~~a~~~~~ 137 (442)
.....|.+ .+++|.+..+ .+++.+...++..++.++.|++.||+|||+.+..+.++..+.. ......++.+.
T Consensus 257 ~~~~~~~~~~~~~g~s~~~------~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (405)
T TIGR00891 257 IQDLLPTYLKADLGLSPHT------VANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAV 330 (405)
T ss_pred hhhhhHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHH
Confidence 33445544 4578999888 9999999999999999999999999999999988877653333 23344566777
Q ss_pred HHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhcc
Q 013453 138 AVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 138 l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (442)
+.+..++.|+..+...+ ..+++.|.+|+++|++++|+.+....+|..++|++.|.+.+
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~ 389 (405)
T TIGR00891 331 LGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQ 389 (405)
T ss_pred HHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777776555445 58899999999999999999999999999999999999998
No 163
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.33 E-value=2.7e-11 Score=113.38 Aligned_cols=131 Identities=16% Similarity=0.097 Sum_probs=109.2
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhh
Q 013453 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEI 162 (442)
Q Consensus 84 ~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~ 162 (442)
.|.+.+...+...++.++.|++.||+|||+.+.++.++.++...+...+++.+.+++.+++.|++...... ...+..+.
T Consensus 256 ~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 335 (396)
T TIGR00882 256 FGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQ 335 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 78889999999999999999999999999999999999988888878889999999999999998766554 46677888
Q ss_pred ccccchhhhhhh-hhHhhhhHHHHHHHhhhhhccccccCCCcccccccccCCcChhHHHHHHHHHHHHH
Q 013453 163 FREEHQALGLST-VSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVT 230 (442)
Q Consensus 163 ~~~~~r~~~~~~-~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~ 230 (442)
.+++.++...+. .+....+|..++|.++|++.+ ..+|+..+.+.+++.++..
T Consensus 336 ~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~----------------~~G~~~~f~~~~~~~~i~~ 388 (396)
T TIGR00882 336 FDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYD----------------SIGFQGAYLVLGCIVLLFT 388 (396)
T ss_pred CCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHH----------------hcccHHHHHHHHHHHHHHH
Confidence 888888877766 678899999999999999998 4455555566666655543
No 164
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.33 E-value=2e-11 Score=117.74 Aligned_cols=178 Identities=14% Similarity=0.028 Sum_probs=108.2
Q ss_pred hhhchhHHHHHHHhcccccchhhh-----hHHHH-HHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhc
Q 013453 58 SSLFPFLYFMIKDFQIAKREEDIG-----SYAGY-VGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL 131 (442)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~g~-~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~ 131 (442)
+......|.+.++.|.+..+.... ..... ......++..++.++.++++||+|||++++++..+.+++..+.++
T Consensus 305 y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~ 384 (502)
T TIGR00887 305 YGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGF 384 (502)
T ss_pred HccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHH
Confidence 334445688888888875431100 00011 233445566778889999999999999998888877777665554
Q ss_pred cc----hHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCcccc
Q 013453 132 SV----NFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSS 206 (442)
Q Consensus 132 a~----~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw 206 (442)
.. +...+...-+...++.....+ ...+.+|.+|.+.|+++.++.+....+|.+++|.+.+.+.+..+.. .|+
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~ 461 (502)
T TIGR00887 385 AYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPT---KGY 461 (502)
T ss_pred HHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhcccccc---ccc
Confidence 32 111111111111122112233 4677899999999999999999999999999999999988621100 000
Q ss_pred cccccCCcChhHHHHHHHHHHHHHHHHhhccccCC
Q 013453 207 ESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLH 241 (442)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 241 (442)
.. ..++...+.+.++..++..+..+++||++.
T Consensus 462 ~~---~~~~~~~~~i~~~~~~~~~i~~~~lpEt~~ 493 (502)
T TIGR00887 462 PT---GIWMGHVLEIFALFMFLGILFTLLIPETKG 493 (502)
T ss_pred cc---cccchHHHHHHHHHHHHHHHHheEeccCCC
Confidence 00 112333445555555555555567788764
No 165
>PRK10054 putative transporter; Provisional
Probab=99.28 E-value=6e-11 Score=110.77 Aligned_cols=111 Identities=16% Similarity=0.033 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhcc-chHHHHHHHHHHHHhhcchhhHH-HHHhhh
Q 013453 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS-VNFWMAVLTRFLLGSLNGLLGPI-KAYACE 161 (442)
Q Consensus 84 ~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a-~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~ 161 (442)
.+++.+.+.+.....+++.|++.||+++|+.+..+..+..++.....++ ++.+.+++..++.|+|.+...|. .+++.+
T Consensus 246 ~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~ 325 (395)
T PRK10054 246 VAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDH 325 (395)
T ss_pred HHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 7888888888888888999999999999999999988888888777764 57777778889999998888885 889999
Q ss_pred hccccchhhhhhhhhHhhhhHHHHHHHhhhhhcc
Q 013453 162 IFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 162 ~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (442)
..|++.|++.++..+ ...+|..+||.++|.+.+
T Consensus 326 ~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~ 358 (395)
T PRK10054 326 IAPPGMKASYFSAQS-LGWLGAAINPLVSGVILT 358 (395)
T ss_pred hCCcccceehHhHHH-HHHHHHHHHHHHHHHHHH
Confidence 999999999988655 555899999999999998
No 166
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.28 E-value=1.2e-09 Score=104.69 Aligned_cols=153 Identities=12% Similarity=0.145 Sum_probs=115.8
Q ss_pred HHHHHHhcccccchhhhhHHHHHHH-HHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHH---hcc-chHHHHH
Q 013453 65 YFMIKDFQIAKREEDIGSYAGYVGS-SFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLF---GLS-VNFWMAV 139 (442)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~g~~~s-~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~---~~a-~~~~~l~ 139 (442)
|.+.+++|.+..+ .+++.. ...++..++.++.|+++||+|+|+.+.++.++..+..+.. +.. ++.+.+.
T Consensus 247 ~~l~~~~G~s~~~------~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~ 320 (491)
T PRK11010 247 TFLIRGVGFDAGE------VGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMG 320 (491)
T ss_pred HHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHH
Confidence 4446778999998 999874 5668999999999999999999998877666555544322 233 4555555
Q ss_pred HHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCcccccccccCCcChhH
Q 013453 140 LTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLP 218 (442)
Q Consensus 140 ~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~ 218 (442)
+.-+++.++.|...+ ..++..+..+++.+++..++.+...++|..+++.+.|.+.+ ..+|+..
T Consensus 321 ~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~----------------~~G~~~~ 384 (491)
T PRK11010 321 AAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVE----------------AHGWPTF 384 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------HhChHHH
Confidence 566666666665555 48888999999999999999999999999999999999998 3445555
Q ss_pred HHHHHHHHHHHHHHHhhcccc
Q 013453 219 CLCISLFAFGVTIAAFWLPET 239 (442)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~e~ 239 (442)
+.+.+++++...+....++++
T Consensus 385 f~~~~~~~l~~l~~~~~~~~~ 405 (491)
T PRK11010 385 YLFSVAAAVPGLLLLLVCRQT 405 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 577777777776666666654
No 167
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.28 E-value=6.6e-11 Score=110.56 Aligned_cols=160 Identities=16% Similarity=0.137 Sum_probs=113.3
Q ss_pred HHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHH-HHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHH
Q 013453 50 VLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFM-FGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTL 128 (442)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~-~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~ 128 (442)
.++............+.+.+|.|.++++ .|++..... ....++.++.|++.||+|+|+.+..+..+.++..+.
T Consensus 217 ~~l~~~~~~~~~~~~~~~l~~~G~s~~~------ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~ 290 (390)
T TIGR02718 217 ALLSAMTAVSGFGLSKLYLVDAGWPLEW------IGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALL 290 (390)
T ss_pred HHHHHHHHHHHHHHhhHHHHhcCCCHHH------HHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 3344443444445566777889999998 999988876 466677899999999999999998877665333322
Q ss_pred Hhc------cchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccc-cchhhhhhhhhHhhhhHHHHHHHhhhhhccccccC
Q 013453 129 FGL------SVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFRE-EHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKY 200 (442)
Q Consensus 129 ~~~------a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~-~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~ 200 (442)
... .++...++....+.+++.+...+ ..+.+.+..++ +++++.+++.+...++|..+||.++|.+.+
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~----- 365 (390)
T TIGR02718 291 WFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTD----- 365 (390)
T ss_pred HHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Confidence 211 23444445555666666677666 47777777765 889999999999999999999999999998
Q ss_pred CCcccccccccCCcChhHHHHHHHHHHHHHH
Q 013453 201 PNLFSSESLFGKFPYFLPCLCISLFAFGVTI 231 (442)
Q Consensus 201 ~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (442)
..+|...+...+++.++..+
T Consensus 366 -----------~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 366 -----------RFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred -----------HHccHHHHHHHHHHHHHHHH
Confidence 34455555666655555433
No 168
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.27 E-value=1.1e-10 Score=109.81 Aligned_cols=127 Identities=13% Similarity=-0.003 Sum_probs=102.7
Q ss_pred hhHHHH-HHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhcc-----chH
Q 013453 62 PFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS-----VNF 135 (442)
Q Consensus 62 ~~~~~~-~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a-----~~~ 135 (442)
...|.+ .+++|.++.+ .++......++..++.++.|+++||+|+|+.+.++.++..++.++..+. ++.
T Consensus 236 ~~~p~~~~~~~g~~~~~------~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 309 (406)
T PRK15402 236 ALSPVILISGEQLSSYE------YGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAY 309 (406)
T ss_pred HHhHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccH
Confidence 334554 4668888888 8888888888999999999999999999999999888777777666543 356
Q ss_pred HHHHHHHHHHHhhcchhhHH-HHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhcc
Q 013453 136 WMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 136 ~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (442)
+.+++.-++.|++.+...+. ...... .++++|++..+..+....+|..+|+.+++.+.+
T Consensus 310 ~~~~~~~~~~g~g~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~ 369 (406)
T PRK15402 310 LWLTAGLSLYAFGIGLANAGLYRLTLF-SSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYL 369 (406)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHhh-hccccccHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 77788889999998877663 444433 345899999999999999999999999999987
No 169
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.27 E-value=1.5e-10 Score=103.01 Aligned_cols=177 Identities=14% Similarity=0.159 Sum_probs=137.6
Q ss_pred hHHHHHHHHHHhHhcchhhchhHHHHHH-HhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHH
Q 013453 42 ELFSIWIIVLCTALPISSLFPFLYFMIK-DFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (442)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~ 120 (442)
.+....++.+...-+.+.+...-..+.. ++|++..+ ...+.....+..+++++++|+|.||+|.|+++.++++
T Consensus 253 ~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~------lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lv 326 (438)
T COG2270 253 NLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTE------LLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLV 326 (438)
T ss_pred chHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHH
Confidence 3443344444444344444444455554 99999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhcccccc
Q 013453 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (442)
Q Consensus 121 ~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 199 (442)
+..+.++..-+......+.+.-.+.|...|..+. +.++.++..|+++-++.+|+++.....++.+||.+-+.+.+.+++
T Consensus 327 i~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~ 406 (438)
T COG2270 327 ILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGS 406 (438)
T ss_pred HHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcc
Confidence 9999998888777777777778899999888777 699999999999999999999999999999999999999884321
Q ss_pred CCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhcccc
Q 013453 200 YPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPET 239 (442)
Q Consensus 200 ~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 239 (442)
-|..+....++..+.++.+..+|++
T Consensus 407 ---------------~r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 407 ---------------SRAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred ---------------hhhHHHHHHHHHHhhHhhEEeecCC
Confidence 2333344444444455555666654
No 170
>PRK15075 citrate-proton symporter; Provisional
Probab=99.26 E-value=2e-10 Score=108.79 Aligned_cols=137 Identities=18% Similarity=0.174 Sum_probs=100.5
Q ss_pred hHhcchhhchhHHHHHHH-hcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHH-H--
Q 013453 53 TALPISSLFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNT-L-- 128 (442)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~-~-- 128 (442)
.......+....|.+.++ +|.+..+ .++....+.++..++.+++|+++||+|||+++..+..+..+... .
T Consensus 250 ~~~~~~~~~~~~p~~l~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~ 323 (434)
T PRK15075 250 TTVSFYLITVYTPTFGKTVLHLSAAD------SLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALS 323 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 344444556667877665 7998888 88888899999999999999999999999998876544332221 1
Q ss_pred -HhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhH-hhhhHHHHHHHhhhhhcc
Q 013453 129 -FGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVST-AWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 129 -~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~ 195 (442)
....+++..+.+..++.|++.+...+ ...++.|.+|+++|+.++++.+. +..++..++|.+.+++.+
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~ 393 (434)
T PRK15075 324 WLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIH 393 (434)
T ss_pred HHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHH
Confidence 11234454555556666777666666 47889999999999999998644 444557789999999988
No 171
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.25 E-value=2.8e-11 Score=115.06 Aligned_cols=148 Identities=14% Similarity=0.165 Sum_probs=110.7
Q ss_pred hHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHH
Q 013453 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (442)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~ 121 (442)
.++.+.+..++............+.+.++...+..+ .+++.+...++..++.+++++++||+|+|+++..+.++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~ 296 (437)
T TIGR00792 223 QLLILCLAYLFYNLAFNIKNGVQVYYFTYVLGDPEL------FSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILL 296 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHcchhheeEeeecCChHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 334344444444444443333334443332113344 67788888999999999999999999999999999988
Q ss_pred HHHHHHHHhcc-chHHHHHHHHHHHHhhcchhhH-HHHHhhhhcc-------ccchhhhhhhhhHhhhhHHHHHHHhhhh
Q 013453 122 VVIFNTLFGLS-VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFR-------EEHQALGLSTVSTAWGIGLIIGPALGGF 192 (442)
Q Consensus 122 ~~i~~~~~~~a-~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 192 (442)
..++.+...+. ++.+.+++..++.|++.+...+ ..++++|..+ ++++|...++.+....+|..+++.+.+.
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ 376 (437)
T TIGR00792 297 MVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGL 376 (437)
T ss_pred HHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88887777665 4567777788889998888777 4888888765 5567999999999999999999999999
Q ss_pred hcc
Q 013453 193 LAQ 195 (442)
Q Consensus 193 l~~ 195 (442)
+.+
T Consensus 377 ll~ 379 (437)
T TIGR00792 377 ILG 379 (437)
T ss_pred HHH
Confidence 987
No 172
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.25 E-value=1.3e-10 Score=111.11 Aligned_cols=153 Identities=10% Similarity=0.051 Sum_probs=100.8
Q ss_pred chhHHHH-HHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCc-------hhhHHHHHHHHHHHHHHhcc
Q 013453 61 FPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRK-------PVIIMGTASVVIFNTLFGLS 132 (442)
Q Consensus 61 ~~~~~~~-~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr-------~~~~~~~~~~~i~~~~~~~a 132 (442)
...+|.+ .+++|.+..+ .+.+.+.+.++..++.+++|+++||+||| ....+..++.++..++.+..
T Consensus 272 ~~~~p~~l~~~~g~s~~~------a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~ 345 (476)
T PLN00028 272 DNIIAEYFYDRFGLSLET------AGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRA 345 (476)
T ss_pred HhHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhccc
Confidence 3445555 4667999888 99999999999999999999999999865 23333344444444555556
Q ss_pred chHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCccccccccc
Q 013453 133 VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFG 211 (442)
Q Consensus 133 ~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~ 211 (442)
++.+..++.-++.+++.+...+ ..+++.+.. +++|+...|+.+.+..+|..++|.+.+ ..+
T Consensus 346 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~---------------- 407 (476)
T PLN00028 346 NSLGAAIVVMILFSIFVQAACGATFGIVPFVS-RRSLGVISGLTGAGGNVGAVLTQLLFF-TGS---------------- 407 (476)
T ss_pred chHHHHHHHHHHHHHHHHHhhhhhcccCcccC-hhhchhhhhhhhccccHHHHHHHHHHH-hcC----------------
Confidence 6666666666666665444444 355666654 478999999987777777766665533 111
Q ss_pred CCcChhHHHHHHHHHHHHHHHHhhcc
Q 013453 212 KFPYFLPCLCISLFAFGVTIAAFWLP 237 (442)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (442)
..+|+..+.+.+++.++..+..++++
T Consensus 408 ~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 408 SYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred CccHhhHHHHHHHHHHHHHHHHHhee
Confidence 22345555777766666666655554
No 173
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.25 E-value=1.8e-10 Score=109.25 Aligned_cols=176 Identities=11% Similarity=0.048 Sum_probs=108.2
Q ss_pred HHHHHHHHHHhHhcchhhchhHHHHHHH-hcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHH
Q 013453 43 LFSIWIIVLCTALPISSLFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (442)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~ 121 (442)
++...+..++............|.+.++ .|.+..+ .++....+.++..++.++.|+++||+++|+....+..+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~------~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~ 326 (438)
T TIGR00712 253 LWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDK------SSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFF 326 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhh------HHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHH
Confidence 3333333344444444455667777765 6888888 89999999999999999999999999754322233222
Q ss_pred HH---HHHHHHhc--cchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhH-HHHHHHhhhhhc
Q 013453 122 VV---IFNTLFGL--SVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIG-LIIGPALGGFLA 194 (442)
Q Consensus 122 ~~---i~~~~~~~--a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g-~~~g~~~~~~l~ 194 (442)
.. ++.+.... ..+.+...+.-++.|.+...... ......|.+|+++|+++.|+.+....+| .+++|.+.|.+.
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~ 406 (438)
T TIGR00712 327 MTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTV 406 (438)
T ss_pred HHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHH
Confidence 21 12222122 22344444444455543222222 2356789999999999999998887776 578999999999
Q ss_pred cccccCCCcccccccccCCcChhHHHHHHHHHHHH-HHHHhhccccC
Q 013453 195 QPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETL 240 (442)
Q Consensus 195 ~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~ 240 (442)
+ ..| |...+.+.....++. +..+...||++
T Consensus 407 ~-------~~g---------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 407 D-------FFG---------WDGGFMVMIGGSILAVILLIVVMIGEK 437 (438)
T ss_pred H-------hcc---------chHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 8 333 334435444444443 44455566653
No 174
>TIGR00898 2A0119 cation transport protein.
Probab=99.24 E-value=1.8e-10 Score=111.57 Aligned_cols=136 Identities=21% Similarity=0.125 Sum_probs=105.4
Q ss_pred HHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhccchH--HHHHHHHHHHHhhcchhhH-HHHHhhhhcc
Q 013453 88 GSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNF--WMAVLTRFLLGSLNGLLGP-IKAYACEIFR 164 (442)
Q Consensus 88 ~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a~~~--~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~ 164 (442)
.....+....+.++.+++.||+|||+++.++.++.+++.++..+.++. +...+.-++.+++.+...+ ...+..|.+|
T Consensus 361 ~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p 440 (505)
T TIGR00898 361 LFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYP 440 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 334556677888999999999999999999999988888887776544 4455555666666555555 5889999999
Q ss_pred ccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhccccCC
Q 013453 165 EEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLH 241 (442)
Q Consensus 165 ~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 241 (442)
++.|++++|+.+....+|.+++|.+.+ +.+ .++..++.+.+...++..+..+++||++.
T Consensus 441 ~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~lpet~~ 499 (505)
T TIGR00898 441 TVVRNLGVGVCSTMARVGSIISPFLVY-LGE-----------------KWLFLPLVLFGGLALLAGILTLFLPETKG 499 (505)
T ss_pred HHHHhhhHhHHHHHHHHHHHHHhHHHH-HHH-----------------HHHhhHHHHHHHHHHHHHHHHHcCcCCCC
Confidence 999999999999999999999999998 432 22345556666676666666778888654
No 175
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.23 E-value=3.1e-10 Score=109.28 Aligned_cols=168 Identities=17% Similarity=0.133 Sum_probs=114.1
Q ss_pred chhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhccc--h
Q 013453 57 ISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSV--N 134 (442)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a~--~ 134 (442)
........|.+.+++|.+..+ ..+......+...++.++.|+++||+|||++++.+.++.+++.++.+... +
T Consensus 287 ~~~~~~~~p~i~~~~g~~~~~------~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~ 360 (479)
T PRK10077 287 INVVLYYAPEIFKTLGASTDI------ALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQ 360 (479)
T ss_pred hhHHHHHHHHHHHHcCCCCch------HHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 334445568888889988777 67777778888999999999999999999999999998888877765431 1
Q ss_pred -HH-HHHHHHHHHHhhcch-hhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCcccccccc
Q 013453 135 -FW-MAVLTRFLLGSLNGL-LGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLF 210 (442)
Q Consensus 135 -~~-~l~~~r~l~G~~~g~-~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~ 210 (442)
.+ .....-++.+.+.+. ..| ...++.|.+|+++|++++++.+....+|..+++.+.+.+.+. +| ..
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~--------~~--~~ 430 (479)
T PRK10077 361 APGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKN--------SW--LV 430 (479)
T ss_pred cccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhc--------cc--hh
Confidence 11 222333444444332 345 489999999999999999999999999999887766554410 00 00
Q ss_pred cCCcChhHHHHHHHHHHHHHH-HHhhccccC
Q 013453 211 GKFPYFLPCLCISLFAFGVTI-AAFWLPETL 240 (442)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~ 240 (442)
+..+++..+.+.++..++..+ .+++.||++
T Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 461 (479)
T PRK10077 431 AHFHNGFSYWIYGCMGVLAALFMWKFVPETK 461 (479)
T ss_pred hhccCccHHHHHHHHHHHHHHHHHhccccCC
Confidence 023334444555555554443 344566654
No 176
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.23 E-value=1.6e-10 Score=102.67 Aligned_cols=158 Identities=13% Similarity=0.130 Sum_probs=125.4
Q ss_pred hhhHHHHHHHHHHhHhcchhhchhHHHHH-HHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhccc--CCchhhH
Q 013453 40 ITELFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY--GRKPVII 116 (442)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~--Grr~~~~ 116 (442)
.+.++.++++.+..+..+..+.-..|.+. |..|.+..+ .++..+.+-.+...|.+++|+++||. |||....
T Consensus 251 Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~------a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~ 324 (448)
T COG2271 251 NKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVK------ANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMA 324 (448)
T ss_pred ChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHH------HHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHH
Confidence 34567788888888989988888888775 557889888 99999999999999999999999994 6776554
Q ss_pred -HHHHHHHHHHHHHhccc--hHHHHHHHHHHHHhh-cchhhHHHHHhhhhccccchhhhhhhhhHhhhh-HHHHHHHhhh
Q 013453 117 -MGTASVVIFNTLFGLSV--NFWMAVLTRFLLGSL-NGLLGPIKAYACEIFREEHQALGLSTVSTAWGI-GLIIGPALGG 191 (442)
Q Consensus 117 -~~~~~~~i~~~~~~~a~--~~~~l~~~r~l~G~~-~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~ 191 (442)
+.+++..++.+..-+++ |+++..+.-++.|+. .|...-+.....|..|++--|.+.|+.+.+..+ |.+.+...-+
T Consensus 325 ~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g 404 (448)
T COG2271 325 LIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLG 404 (448)
T ss_pred HHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcce
Confidence 44555555555555665 457777777888876 444433567788999999999999999999998 8999988888
Q ss_pred hhccccccCCCcccccccc
Q 013453 192 FLAQPAEKYPNLFSSESLF 210 (442)
Q Consensus 192 ~l~~~~~~~~~~~gw~~~~ 210 (442)
++.+ .+||.+.|
T Consensus 405 ~i~d-------~~gW~g~F 416 (448)
T COG2271 405 YIAD-------TWGWDGGF 416 (448)
T ss_pred eeEe-------cCCCcchH
Confidence 8888 57777666
No 177
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.23 E-value=5.3e-10 Score=105.90 Aligned_cols=134 Identities=12% Similarity=0.053 Sum_probs=88.5
Q ss_pred hcchhhchhHHHHH-HHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHh---
Q 013453 55 LPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFG--- 130 (442)
Q Consensus 55 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~--- 130 (442)
.........+|.+. +++|.+..+ .++..+...++..+++++.|+++||+|||+++.++.++..+......
T Consensus 257 ~~~~~~~~~lp~~l~~~~g~s~~~------~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~ 330 (432)
T PRK10406 257 LCFYTFTTYMQKYLVNTAGMHANV------ASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSAL 330 (432)
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHH
Confidence 33444556677665 557888877 88888888888899999999999999999988776654433332111
Q ss_pred -ccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhh-HHHHHHHhhhhhc
Q 013453 131 -LSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGI-GLIIGPALGGFLA 194 (442)
Q Consensus 131 -~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~ 194 (442)
..++....+..-.+.+++.+...+ ...+++|.+|++.|+.++|+.+...++ .....|.+.+.+.
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~ 397 (432)
T PRK10406 331 QNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLK 397 (432)
T ss_pred HcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHH
Confidence 122333222222222233334444 477889999999999999988765543 3445777777553
No 178
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.22 E-value=9.9e-11 Score=108.93 Aligned_cols=154 Identities=16% Similarity=0.148 Sum_probs=106.8
Q ss_pred HHHHHHHHHHhHhcchhhchhHHHHH-HHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccC-CchhhH-HHH
Q 013453 43 LFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG-RKPVII-MGT 119 (442)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~G-rr~~~~-~~~ 119 (442)
++.+.+..+.............|.+. +++|.+..+ .+++.+.+.++..++.++.|++.||.. ||+... ...
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~ 291 (379)
T TIGR00881 218 LWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEK------ASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFF 291 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH------HHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHH
Confidence 33444444554544455555666655 567888888 999999999999999999999999864 333222 222
Q ss_pred -HHHHHHHHHHhc--cchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhcc
Q 013453 120 -ASVVIFNTLFGL--SVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 120 -~~~~i~~~~~~~--a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (442)
....++...... ..+.....+..++.|+......+ ...++.|.+|+++|+++.++.+....+|..++|.+.|.+.+
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 371 (379)
T TIGR00881 292 MALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLAD 371 (379)
T ss_pred HHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHH
Confidence 222222222222 33555566666777765444444 47788999999999999999999999999999999999998
Q ss_pred ccccCCCccccccc
Q 013453 196 PAEKYPNLFSSESL 209 (442)
Q Consensus 196 ~~~~~~~~~gw~~~ 209 (442)
..||++.
T Consensus 372 -------~~g~~~~ 378 (379)
T TIGR00881 372 -------GFGWAGA 378 (379)
T ss_pred -------hhccccc
Confidence 5566543
No 179
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.22 E-value=3.7e-10 Score=104.68 Aligned_cols=172 Identities=16% Similarity=0.175 Sum_probs=123.3
Q ss_pred HHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHH
Q 013453 49 IVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTL 128 (442)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~ 128 (442)
.......+.+.+......+.++-|++..+ ..+++....+...+..+.+..+.||+|||+.++.+..+..+..++
T Consensus 278 ~~~qq~sGi~ai~~Yst~i~~~aG~~~~~------a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~ 351 (485)
T KOG0569|consen 278 SFAQQFSGINAIFFYSTSIFKTAGFTPEE------AQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLL 351 (485)
T ss_pred HHHHHhcCcceeHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Confidence 33334445566667778888999999998 899999999999999999999999999999999999999888887
Q ss_pred Hhccc---hHH------HHHHHHHHHHhhcch-hhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhcccc
Q 013453 129 FGLSV---NFW------MAVLTRFLLGSLNGL-LGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (442)
Q Consensus 129 ~~~a~---~~~------~l~~~r~l~G~~~g~-~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 197 (442)
+.... +.. ..+++.++..++.+. ..| ..-+.+|.+|++.|..+++.......+...+-...-..+.+
T Consensus 352 ~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~-- 429 (485)
T KOG0569|consen 352 MSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQN-- 429 (485)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 76532 111 123444444444333 345 47889999999999999999988888887776666666655
Q ss_pred ccCCCcccccccccCCcChhHHHHHHHHHH-HHHHHHhhccccCCCC
Q 013453 198 EKYPNLFSSESLFGKFPYFLPCLCISLFAF-GVTIAAFWLPETLHRH 243 (442)
Q Consensus 198 ~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~~~~~ 243 (442)
.+| - ..+++..+.++ ..+..++.+||++.+.
T Consensus 430 -----~~g---------~-~~filF~i~~~~~~i~~~~~lPETkgr~ 461 (485)
T KOG0569|consen 430 -----VIG---------P-YVFILFVIPLAIFLIYLYRYLPETKGRT 461 (485)
T ss_pred -----Hhc---------c-hhhHHHHHHHHHHHHHHHHhCcccCCCC
Confidence 222 1 12233344443 4456778899987543
No 180
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.21 E-value=3.7e-10 Score=104.12 Aligned_cols=141 Identities=13% Similarity=0.032 Sum_probs=109.1
Q ss_pred HHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhccc-CCchhhHHHHHHHHHHHH
Q 013453 49 IVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-GRKPVIIMGTASVVIFNT 127 (442)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~~~~~~~~~~i~~~ 127 (442)
..++...........+|.+.++.|.+..+ .+.+.+.+.++..++.++.|++.||+ +||+.+..+..+..++.+
T Consensus 205 ~~~~~~~~~~~~~~~lp~~~~~~g~~~~~------~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 278 (355)
T TIGR00896 205 FFGLQSGLYYSLIGWLPAILISHGASAAT------AGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLC 278 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHH
Confidence 33333444445556778888888998888 99999999999999999999999999 567777788888888777
Q ss_pred HHhccchHHHHHHHHHHHHhhcchhhHH-HHHhhhhcc-ccchhhhhhhhhHhhhhHHHHHHHhhhhhccc
Q 013453 128 LFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR-EEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (442)
Q Consensus 128 ~~~~a~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 196 (442)
...+.++..... .-++.|++.|...|. .+.+.+..+ +++++...++.+....+|..++|.+.|++.+.
T Consensus 279 ~~~~~~~~~~~~-~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~ 348 (355)
T TIGR00896 279 GLLFAPMHGLWA-WALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDI 348 (355)
T ss_pred HHHHhhhhHHHH-HHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 776655433322 456789998888774 666665554 56678889998888899999999999999983
No 181
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.21 E-value=6.8e-10 Score=103.64 Aligned_cols=124 Identities=12% Similarity=0.020 Sum_probs=99.8
Q ss_pred HHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHH-HHHHHHHHhccchHHHHHHHH
Q 013453 64 LYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS-VVIFNTLFGLSVNFWMAVLTR 142 (442)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~-~~i~~~~~~~a~~~~~l~~~r 142 (442)
.|.+.+++|.+..+ .+++...+.++..++.++.+++.||.+ |+.++.+..+ .....++....++.+.+.+..
T Consensus 240 ~p~~~~~~g~s~~~------~g~~~~~~~~~~iig~~~~~~l~~r~~-~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 312 (394)
T PRK10213 240 RPVYMNLAGFGVDG------LTLVLLSFGIASFVGTSLSSFILKRSV-KLALAGAPLVLAVSALVLTLWGSDKIVATGVA 312 (394)
T ss_pred HHHHHHhcCCChhH------HHHHHHHHHHHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 47778889999888 999999999999999999999999964 4444444444 444444545666788888888
Q ss_pred HHHHhhcchhhHH-HHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhcc
Q 013453 143 FLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 143 ~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (442)
++.|++.+...+. .+++.+..| +++++..+......++|..+||.++|.+.+
T Consensus 313 ~l~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~ 365 (394)
T PRK10213 313 IIWGLTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALD 365 (394)
T ss_pred HHHHHHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999998888884 778888887 557778888888889999999999999998
No 182
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.20 E-value=5.2e-10 Score=103.43 Aligned_cols=182 Identities=16% Similarity=0.273 Sum_probs=136.8
Q ss_pred hHHHHHHHHHHhHhcchhhchhHHHHHHHhc-ccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHH
Q 013453 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQ-IAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (442)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~ 120 (442)
++....+..++.......+....+.+.++.| .+... .+.+.++..++-.+.-...+++..|+|.|+++.++.+
T Consensus 208 ~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~------~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~ 281 (400)
T PF03825_consen 208 RFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGST------IGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALV 281 (400)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhH------HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 3445555666667777777788888899988 56666 7888888888888999999999999999999999999
Q ss_pred HHHHHHHHHhcc-chHHHHHHH----HHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhH-hhhhHHHHHHHhhhhh
Q 013453 121 SVVIFNTLFGLS-VNFWMAVLT----RFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVST-AWGIGLIIGPALGGFL 193 (442)
Q Consensus 121 ~~~i~~~~~~~a-~~~~~l~~~----r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~~~~~l 193 (442)
.+++=..+++.. ++.+...+. ..++|+..+...+ ...++.+..|++.|+++.++++. ..++|..+|..++|++
T Consensus 282 ~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l 361 (400)
T PF03825_consen 282 AYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWL 361 (400)
T ss_pred HHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 999998888887 554443333 4569999888888 59999999999999999998776 5789999999999999
Q ss_pred ccccccCCCcccccccccCCcChhHHHHHHHHHHHHHH-HHhhcccc
Q 013453 194 AQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPET 239 (442)
Q Consensus 194 ~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~ 239 (442)
.+ .+|-+..+ + |...+.+.+.+.++..+ .+++.||+
T Consensus 362 ~~-------~~g~~~~~-~--~~~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 362 YD-------AFGARGMF-D--WSAVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred HH-------Hhcchhhh-h--HHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 99 55555444 1 33333444444444433 33344443
No 183
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.20 E-value=2.2e-10 Score=107.16 Aligned_cols=129 Identities=11% Similarity=0.040 Sum_probs=107.0
Q ss_pred hhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcc-cCCchhhHHHHHHHHHHHHHHhccchHHHHHH
Q 013453 62 PFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPVIIMGTASVVIFNTLFGLSVNFWMAVL 140 (442)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~~~~~~~~~~i~~~~~~~a~~~~~l~~ 140 (442)
..+|.+.++.+.++.+ .+++.+...++...+..+.+++.|| ++.|+.+..+.++.+++.++.+++++++.+.+
T Consensus 229 ~~~p~~~~~~~~~~~~------~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 302 (400)
T PRK11646 229 LMLPIMVNDIAGSPSA------VKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFT 302 (400)
T ss_pred HhhhhhHHhhcCCchH------HHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 4567777776656666 8888888887777666666777664 67677778888888888888888888888888
Q ss_pred HHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccc
Q 013453 141 TRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (442)
Q Consensus 141 ~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 196 (442)
..++.|++.+...| ..+++.|..|+++|++.+++.+....+|..+||.++|++.+.
T Consensus 303 ~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~ 359 (400)
T PRK11646 303 LICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDL 359 (400)
T ss_pred HHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHH
Confidence 88888998888777 488999999999999999999999999999999999999983
No 184
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.20 E-value=1.9e-10 Score=109.06 Aligned_cols=175 Identities=15% Similarity=0.226 Sum_probs=148.8
Q ss_pred hHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccC--CchhhHHHH
Q 013453 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG--RKPVIIMGT 119 (442)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~G--rr~~~~~~~ 119 (442)
.++.+.+...+..++.......+|.+.++.+.++.+ .+.+.++..+...++.+..|+++|+.. ++.+..+++
T Consensus 299 ~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~------aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~l 372 (509)
T KOG2504|consen 299 KFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSND------AAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTL 372 (509)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhh------hHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHH
Confidence 344566667777777788888889999999999999 999999999999999999999999988 556677788
Q ss_pred HHHHHHHHHHhccchHHHHHHHHHHHHhhcchhhHH-HHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccc
Q 013453 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (442)
Q Consensus 120 ~~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 198 (442)
+..+++...++++++++.++...++.|++.|.+... ...+.|..+.++-..+.|+.....+++..+||+++|++.+..+
T Consensus 373 l~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg 452 (509)
T KOG2504|consen 373 LIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITG 452 (509)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccC
Confidence 888999999999999999999999999999999885 5688999999999999999999999999999999999888332
Q ss_pred cCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhcc
Q 013453 199 KYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLP 237 (442)
Q Consensus 199 ~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (442)
+ |...+...++..++....++..|
T Consensus 453 ~---------------Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 453 N---------------YDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred C---------------eeeehhhcChHHHHHHHHHHHhH
Confidence 1 44445677777766666666665
No 185
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.20 E-value=5.1e-11 Score=103.31 Aligned_cols=125 Identities=21% Similarity=0.295 Sum_probs=96.3
Q ss_pred HHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhccchHH----HHHHHHHHHHhhcchhhHHHHHhhhhccccch
Q 013453 93 FGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFW----MAVLTRFLLGSLNGLLGPIKAYACEIFREEHQ 168 (442)
Q Consensus 93 ~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a~~~~----~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r 168 (442)
+.-.-|.++.+++.||+|||+++..+.+++++..++...+.+-. +++.+|++. .|.+.+++.|..|.+|.+.|
T Consensus 392 laefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafi---sg~fqvaYvYtPEVyPTavR 468 (528)
T KOG0253|consen 392 LAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFI---SGAFQVAYVYTPEVYPTAVR 468 (528)
T ss_pred HhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHH---hchheEEEEecCcccchhhh
Confidence 44567889999999999999999999999999998877765433 334445433 34455568899999999999
Q ss_pred hhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhccc
Q 013453 169 ALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPE 238 (442)
Q Consensus 169 ~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 238 (442)
+.+.|....+..+|.++.|+++ ...+ ..-..+..+.+.+.+++.+...++|-
T Consensus 469 atgvGtcSsmaRIggI~~p~iA-~~~e-----------------~s~sl~i~vy~~~~ilagIavcffPi 520 (528)
T KOG0253|consen 469 ATGVGTCSSMARIGGIFSPVIA-MRAE-----------------LSTSLPIFVYGALFILAGIAVCFFPI 520 (528)
T ss_pred hcchhhhhhHHhhhhhhhhHHH-HHhc-----------------cceeehHHHHHHHHHHHHHHheeeee
Confidence 9999999999999999999999 3322 22234556677777777777777774
No 186
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=99.20 E-value=3.4e-08 Score=89.36 Aligned_cols=325 Identities=14% Similarity=0.095 Sum_probs=170.4
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhcchhhHH-HHHhhhh
Q 013453 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEI 162 (442)
Q Consensus 84 ~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~ 162 (442)
.+.+.-+-.+...+.-+.+.+..+|+..+.=.....+++.++.++.+++++.+.-+++-++.+++.|.--.. ..+ +..
T Consensus 61 t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~l-t~~ 139 (402)
T PF02487_consen 61 TGAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSL-THF 139 (402)
T ss_pred chHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHH-HHh
Confidence 455666677778888888899999988666667777788899999999999999889999999988876664 444 445
Q ss_pred ccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCcccccccccCCcChhHHHHHHHHHHHHHHHHh-hccccCC
Q 013453 163 FREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAF-WLPETLH 241 (442)
Q Consensus 163 ~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~e~~~ 241 (442)
+++ ..++-+..+.+.+.++|+..-..+.+ . ....|........+.++..+.++ .+|+++.
T Consensus 140 y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~-~--------------g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~ 200 (402)
T PF02487_consen 140 YGK----SSLSAWSSGTGGAGLVGALYYLGLTT-L--------------GLSPRTTLLIMLVLPAIFLLSYFFLLPSPPT 200 (402)
T ss_pred cCc----cccccccCCcChhhHHHHHHHHHHHH-h--------------CcCHHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 654 35778888888888888876655543 1 34445555555555544444433 4444332
Q ss_pred CCCCCC-ccchhhhhhhhhhhhhhhhhhcccccccccccc-cchhHHHHHHHHHHHHHHh-hHHHHHHHHhcCCcccCcc
Q 013453 242 RHNDDD-DSCDVSYDALESASAEVKEEEGREATPKKSLLK-NWPLMSSIIVYCVFSLHDM-AYSEIFSLWANSPKKLGGL 318 (442)
Q Consensus 242 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 318 (442)
.....+ +..++.++.....+.++++.+...+.+.++-++ -+.+...++-.+...+..+ ......+...... . .
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~k~Ll~ymiPL~lVY~aEY~InqGv~~tl~fp~---~-~ 276 (402)
T PF02487_consen 201 NRPYQESESEDEAEDDLLESETSESKPDSSSKLSFKEKLKRLKPLLWYMIPLFLVYFAEYFINQGVAPTLLFPN---S-F 276 (402)
T ss_pred cCCCcccCCCCcccccccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHhcCCc---c-C
Confidence 211111 111100000000000000001111111221111 1222222222222222222 2223333332211 1 1
Q ss_pred cCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHH
Q 013453 319 NYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSV 398 (442)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (442)
.-...+.-+....+.++.++++- ...++ |.++.+++.+...+..+.+.+-.+....+ ..|+.+ +..+.-|..++
T Consensus 277 ~~~r~~Y~~Y~~~YQ~GVFISRS-S~~~~--rir~lwils~LQ~~nl~~~~l~s~~~fip--si~ivf-~lif~eGLlGG 350 (402)
T PF02487_consen 277 FSPRDQYRWYQLLYQLGVFISRS-SLPFF--RIRRLWILSLLQVINLVFLLLQSWYRFIP--SIWIVF-VLIFYEGLLGG 350 (402)
T ss_pred CCHHHHHHHHHHHHHHHHhhhhc-ceeee--ehhhHHHHHHHHHHHHHHHHHHHHHHHhh--HHHHHH-HHHHHHHHhhh
Confidence 11234455566666677666654 22221 22333333332233333322222222211 234333 33344455555
Q ss_pred HHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhccc
Q 013453 399 SIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAG 438 (442)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i 438 (442)
..+...+..+.+..|+++|.-++|........|-.++..+
T Consensus 351 a~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll 390 (402)
T PF02487_consen 351 ASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLL 390 (402)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 5666666666777899999999999999988888877654
No 187
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.19 E-value=1.4e-09 Score=92.47 Aligned_cols=132 Identities=14% Similarity=0.195 Sum_probs=108.6
Q ss_pred cchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhcc---
Q 013453 56 PISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS--- 132 (442)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a--- 132 (442)
..+.+...-|.+++++|.|.+| ...+.++..+|..+ +++.|.+.|++|+|.++.+|.+...++..+...+
T Consensus 17 t~Y~Fs~yS~~Lk~~l~~sq~~------l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~ 89 (250)
T PF06813_consen 17 TTYTFSAYSPQLKSRLGYSQSQ------LNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSG 89 (250)
T ss_pred cccchhhhhHHHHHHhCCCHHH------HHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3455566679999999999999 99999999999876 5889999999999999999999999999877652
Q ss_pred ----chHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhcc
Q 013453 133 ----VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 133 ----~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (442)
.++|.+.+..++.|.+.+...+ +.....+.+| ++||++.|+.-...++++.+-..+...+.+
T Consensus 90 ~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~ 156 (250)
T PF06813_consen 90 RIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFG 156 (250)
T ss_pred ccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcC
Confidence 4678888877888787666655 4555667887 589999999999999998887777666654
No 188
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.17 E-value=8.3e-10 Score=102.82 Aligned_cols=123 Identities=13% Similarity=0.115 Sum_probs=93.0
Q ss_pred HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhc-cchHHHHHHHHH
Q 013453 65 YFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL-SVNFWMAVLTRF 143 (442)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~-a~~~~~l~~~r~ 143 (442)
|.+.+.+|.++.+ .+++.+...++..++.++.|++.||+|+|+.+..+..+.+++.++... .++.+..++..+
T Consensus 224 ~~~~~~~g~s~~~------~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 297 (382)
T PRK10091 224 PYMMFISGFSETS------MTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAF 297 (382)
T ss_pred HHHHHhcCCCHHH------HHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 4555668999888 999999999999999999999999999999999988888877765543 455566666666
Q ss_pred HHHhhcchhhH-HH-HHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhcc
Q 013453 144 LLGSLNGLLGP-IK-AYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 144 l~G~~~g~~~~-~~-~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (442)
+.+++.....+ .. ....+..+++.++.. ..+....+|..+||.++|.+.+
T Consensus 298 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~ 349 (382)
T PRK10091 298 ICCAGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLT 349 (382)
T ss_pred HHHHHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHH
Confidence 77776443333 43 344444455555544 3466788999999999999987
No 189
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.16 E-value=1.3e-09 Score=97.81 Aligned_cols=145 Identities=16% Similarity=0.107 Sum_probs=109.5
Q ss_pred hHHHHHHHHHHhHhcchhhchhHHHHHHH---hcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHH
Q 013453 42 ELFSIWIIVLCTALPISSLFPFLYFMIKD---FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (442)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~ 118 (442)
.++...+..|+............+.+.++ +|.++.+ .++..+.+..+..++.+..+++.||+|+||++.++
T Consensus 141 ~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~------a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~ 214 (310)
T TIGR01272 141 HLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQ------AAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFN 214 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence 34444444444444455566667777654 5888888 99999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHhccchHHHHHHHHHHHHhhcchhhHH-HHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhcc
Q 013453 119 TASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 119 ~~~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (442)
..+..++.++....++...+ .+-++.|++.+...|. .+...+..|++ .+++.++. ....+|..++|.+.|.+.+
T Consensus 215 ~~l~~~~~~l~~~~~~~~~~-~~~~l~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad 289 (310)
T TIGR01272 215 AFLAVLLSIGAALTHGYVAM-WFVLALGLFNSIMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLAD 289 (310)
T ss_pred HHHHHHHHHHHHHcCCHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHH
Confidence 88888777666655544333 3556888998888884 88888877753 45566665 5667899999999999998
No 190
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.13 E-value=6.5e-10 Score=107.21 Aligned_cols=147 Identities=16% Similarity=0.120 Sum_probs=118.8
Q ss_pred HHHHHHHHHHhHhcchhhchhHHHHHHH-hcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHH
Q 013453 43 LFSIWIIVLCTALPISSLFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (442)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~ 121 (442)
+....+..++..+........+|.+.++ +|.+..+ .+++.....++..++.++.|++.||+|||+++.++..+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~ 330 (485)
T TIGR00711 257 FTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQ------AGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLIL 330 (485)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHH
Confidence 3333444444444444455566766654 7888888 99999999999999999999999999999999999988
Q ss_pred HHHHHHHHhc----cchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhcc
Q 013453 122 VVIFNTLFGL----SVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 122 ~~i~~~~~~~----a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (442)
.+++..+..+ ..+++.+....++.|++.+...+ ......+..|+++|+++.++.+....+|..+|+.+.+.+.+
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~ 409 (485)
T TIGR00711 331 YAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILT 409 (485)
T ss_pred HHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888877663 23566777778899999888765 57777788999999999999999999999999999998876
No 191
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.11 E-value=2.5e-09 Score=97.20 Aligned_cols=183 Identities=21% Similarity=0.227 Sum_probs=133.6
Q ss_pred hhHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHH
Q 013453 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (442)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~ 120 (442)
++++.+.+........++......+.+-+++--+..+ -....|.+.+..-+.-.+...+..++.+|+|.|+.++++..
T Consensus 220 ~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~--g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~ 297 (412)
T PF01306_consen 220 RNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQ--GNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGV 297 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc--ChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHH
Confidence 4444333333333333333333455555544333221 11229999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhh-hhHhhhhHHHHHHHhhhhhccccc
Q 013453 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLST-VSTAWGIGLIIGPALGGFLAQPAE 198 (442)
Q Consensus 121 ~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~-~~~~~~~g~~~g~~~~~~l~~~~~ 198 (442)
+..+=.++++++++.+.+.+.+.+.|+-.+.... +..|+++.+|+|..++...+ .+.+.++|..+.+.++|.+.|
T Consensus 298 i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd--- 374 (412)
T PF01306_consen 298 IMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYD--- 374 (412)
T ss_dssp HHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHh---
Confidence 9999999999999999999999999999888877 59999999999988888887 588999999999999999999
Q ss_pred cCCCcccccccccCCcChhHHHHHHHHHHHH-HHHHhhccccCC
Q 013453 199 KYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLH 241 (442)
Q Consensus 199 ~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~ 241 (442)
+.+++..+.+.+.+.+.. ++..+.++++++
T Consensus 375 -------------~~G~~~tylimg~iv~~~~li~~f~l~~~~~ 405 (412)
T PF01306_consen 375 -------------RIGFQHTYLIMGLIVLPFTLISAFTLKKDKK 405 (412)
T ss_dssp -------------HHHHHHHHHHHHHHHHHHHHHHHHHS--SSS
T ss_pred -------------hcCcHHHHHHHHHHHHHHHHHheeeecCCCc
Confidence 556666666666665554 445566665444
No 192
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.11 E-value=7.2e-10 Score=102.27 Aligned_cols=132 Identities=15% Similarity=0.132 Sum_probs=103.9
Q ss_pred HHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHH-HHHHhhhhhhhhhhcccCCchhhHHHHHH
Q 013453 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFM-FGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (442)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~-~~~~~~~~~~G~l~dr~Grr~~~~~~~~~ 121 (442)
++.+.+..++............|.+.+++|.+.++ .+.+.+... ++..++.+++|++.||+|||+.+..+.++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~------~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~ 284 (356)
T TIGR00901 211 ALLLLLLIVLYKLGDSAATVLTTLFLLDMGFSKEE------IALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIV 284 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 33344444444455555666777777779999888 898887765 67889999999999999999999988888
Q ss_pred HHHHHHHHhcc-----------chHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhh
Q 013453 122 VVIFNTLFGLS-----------VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWG 180 (442)
Q Consensus 122 ~~i~~~~~~~a-----------~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~ 180 (442)
.++...+..+. ++.+.+....++.+++.+...+ ..+++.|.+|+++|++.+++.+...+
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 285 QALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 87776655442 4567788888999999898888 59999999999999999999877654
No 193
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.11 E-value=1.5e-09 Score=101.89 Aligned_cols=148 Identities=14% Similarity=0.162 Sum_probs=100.6
Q ss_pred HHHHHHhcccccchhhhhHHHHHHHHHH-HHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHH---hcc-chHHHHH
Q 013453 65 YFMIKDFQIAKREEDIGSYAGYVGSSFM-FGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLF---GLS-VNFWMAV 139 (442)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~g~~~s~~~-~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~---~~a-~~~~~l~ 139 (442)
+.+.+++|.++++ .+++.+... ++..++.++.|++.||+|||+.+..+..+..+..+.. ++. ++.+.++
T Consensus 234 ~~l~~~~G~~~~~------~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~ 307 (402)
T PRK11902 234 TFLIRGAGFSAGE------VGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMA 307 (402)
T ss_pred HHHHHhcCCCHHH------HHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHH
Confidence 4566778999888 999886654 5688999999999999999998887776666554433 343 4556655
Q ss_pred HHHHH----HHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCcccccccccCCc
Q 013453 140 LTRFL----LGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFP 214 (442)
Q Consensus 140 ~~r~l----~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~ 214 (442)
+.-++ .|++.+...+ ...++.+.+|.+++ ++.+...++|..+++.++|.+.+ ..+
T Consensus 308 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~G~l~~----------------~~G 367 (402)
T PRK11902 308 LAIGIENLCGGMGTAAFVALLMALCNRSFSATQY----ALLSALASVGRVYVGPTSGYLVE----------------AYG 367 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHH----HHHHHHHHHHHHHHHHHHHHHHH----------------HhC
Confidence 55544 4444444455 36677777665544 55555667788777778999998 445
Q ss_pred ChhHHHHHHHHHHHHHHHHhhccc
Q 013453 215 YFLPCLCISLFAFGVTIAAFWLPE 238 (442)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~e 238 (442)
|+..+.+.++++++.++..+..+.
T Consensus 368 ~~~~f~~~~~~~~~~~~~~~~~~~ 391 (402)
T PRK11902 368 WPGFYLMTVVIALPGLALLWLMRG 391 (402)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhh
Confidence 555557777777666555544443
No 194
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.09 E-value=6.1e-10 Score=102.54 Aligned_cols=136 Identities=20% Similarity=0.256 Sum_probs=112.5
Q ss_pred HHHHHHHhHhcchhhchhHHHH-HHHhccc-ccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHH
Q 013453 46 IWIIVLCTALPISSLFPFLYFM-IKDFQIA-KREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVV 123 (442)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~ 123 (442)
.....+...+.........|.+ .+++|.+ ..+ .+++.+...+...++.++.|++.||+|+|+..........
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 284 (352)
T PF07690_consen 211 LLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQ------AGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLI 284 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHH------HHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhhhhhHHHHHHHHhhcccchhhhhccCCCHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHH
Confidence 3334444444555567777886 7889999 677 8999999999999999999999999999888888887777
Q ss_pred HHHHHHhccc---hHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHH
Q 013453 124 IFNTLFGLSV---NFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGP 187 (442)
Q Consensus 124 i~~~~~~~a~---~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 187 (442)
+..+...+.. +....++.-++.|++.+...+ ..+++.|..|+++|+++.++.+...++|..+||
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 285 LGALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 7777666543 457777788899999888888 599999999999999999999999999999987
No 195
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.08 E-value=2e-09 Score=101.19 Aligned_cols=146 Identities=12% Similarity=0.127 Sum_probs=99.0
Q ss_pred HHHHHHHHHhHhcchhhchhHHHHHHHh--cccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchh-hHHHHH
Q 013453 44 FSIWIIVLCTALPISSLFPFLYFMIKDF--QIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPV-IIMGTA 120 (442)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~-~~~~~~ 120 (442)
+...+..++.......+...+|.+.+++ +.+..+ .+...+...++..++.++.|+++||++||+. .....+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~------~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~ 318 (412)
T TIGR02332 245 MLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIM------IGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYL 318 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHH------hHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHH
Confidence 3344444445555566677888888875 456666 8999999999999999999999999998775 334444
Q ss_pred HHHHHHHHHhccchHHHHHHHHHHHHhhcchhhHH-HHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhcc
Q 013453 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 121 ~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (442)
+..++..+.....+....+++-.+.+++.....+. .....|.+|+++|++++|+.+....+|.+++|.+.+.+.+
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~ 394 (412)
T TIGR02332 319 FAAAGWLLASATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKD 394 (412)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccc
Confidence 44443332222223222222222223332222332 4455678999999999999999999999999999999988
No 196
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.06 E-value=2.9e-09 Score=113.75 Aligned_cols=132 Identities=14% Similarity=0.110 Sum_probs=114.2
Q ss_pred hhhchhHHHH-HHHhccccc-chhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhccchH
Q 013453 58 SSLFPFLYFM-IKDFQIAKR-EEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNF 135 (442)
Q Consensus 58 ~~~~~~~~~~-~~~~~~~~~-~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a~~~ 135 (442)
......+|.+ .+.+|.+.. + .+++.+...++..+++++.|+++||+++|+++.++.++.+++.++..+..+.
T Consensus 249 ~~~~~~~~~~~~~~~g~s~~~~------~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (1146)
T PRK08633 249 QLAQANFPAYAKEVLGLDNTFQ------VQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSL 322 (1146)
T ss_pred HHHHHhhHHHHHHHhCCCcHHH------HHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhH
Confidence 3334445544 466888888 7 9999999999999999999999999999999999998888888888888898
Q ss_pred HHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhcc
Q 013453 136 WMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 136 ~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (442)
+.+++..++.|++.+...+ ..+++.+..|+++|++++++.+....+|.++++.+++.+..
T Consensus 323 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~ 383 (1146)
T PRK08633 323 ASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSG 383 (1146)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888999999999888776 58999999999999999999999999999888888877653
No 197
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.06 E-value=3.2e-09 Score=100.41 Aligned_cols=149 Identities=17% Similarity=0.197 Sum_probs=125.2
Q ss_pred hhHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHH
Q 013453 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (442)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~ 120 (442)
+.+..+....++..+.........+.+.++.--+++. .+.+.....++..++.+++++++||+|+|+++..+..
T Consensus 225 r~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~~~------~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~ 298 (428)
T PF13347_consen 225 RPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNEGL------ISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLL 298 (428)
T ss_pred chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCchh------hHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHH
Confidence 4455566667777777777777777777665444455 7888889999999999999999999999999999999
Q ss_pred HHHHHHHHHhccc--hHHHHHHHHHHHHhhcchhhH-HHHHhhhhccc-------cchhhhhhhhhHhhhhHHHHHHHhh
Q 013453 121 SVVIFNTLFGLSV--NFWMAVLTRFLLGSLNGLLGP-IKAYACEIFRE-------EHQALGLSTVSTAWGIGLIIGPALG 190 (442)
Q Consensus 121 ~~~i~~~~~~~a~--~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~-------~~r~~~~~~~~~~~~~g~~~g~~~~ 190 (442)
+.+++.++..+.+ |.+.+++.-++.|++.+...+ ..++++|..+. ++.|...+..+....+|..+++.+.
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~ 378 (428)
T PF13347_consen 299 LAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIV 378 (428)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHH
Confidence 9999999988876 999999999999999888877 48899888763 4458888999999999999999999
Q ss_pred hhhcc
Q 013453 191 GFLAQ 195 (442)
Q Consensus 191 ~~l~~ 195 (442)
+.+.+
T Consensus 379 g~~l~ 383 (428)
T PF13347_consen 379 GLLLA 383 (428)
T ss_pred HHHHH
Confidence 98887
No 198
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.06 E-value=2.5e-09 Score=102.44 Aligned_cols=177 Identities=16% Similarity=0.186 Sum_probs=112.7
Q ss_pred hhHHHHHHHHHHhHhcchhhchhHHHHH-HHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhh----
Q 013453 41 TELFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVI---- 115 (442)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~---- 115 (442)
+.++..++..+............+|.+. +++|.+..+ .+++.+...++..++.++.|+++||+++|+..
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~------~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~ 334 (465)
T TIGR00894 261 LPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKE------NGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTA 334 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHH------hHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHH
Confidence 3445555666666666666666778775 557998888 99999999999999999999999998755321
Q ss_pred ----HHHHHHH--HHHHHHHhc-cchHHHHHHHHHHHHhhcchhhHH-HHHhhhhccccchhhhhhhhhHhhhhHHHHHH
Q 013453 116 ----IMGTASV--VIFNTLFGL-SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGP 187 (442)
Q Consensus 116 ----~~~~~~~--~i~~~~~~~-a~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 187 (442)
..+.... .+..+.... ..+....++.-.+.+.+.+...+. .....|..| +.+|...++.+....+|..++|
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~i~p 413 (465)
T TIGR00894 335 ARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAP-RFLGFIKGITGLPGFIGGLIAS 413 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcCh-hHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111 111111122 234444444444445444444443 445556665 4899999999999999999999
Q ss_pred HhhhhhccccccCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhcc
Q 013453 188 ALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLP 237 (442)
Q Consensus 188 ~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (442)
.+.+.+.+.. + ...|...+.+.++..++..+....++
T Consensus 414 ~l~g~~~~~~-------~------~~~~~~~f~~~~~~~~i~~i~~~~~~ 450 (465)
T TIGR00894 414 TLAGNILSQD-------S------KNVWLIVFLIMAFVNILCVIFYLIFG 450 (465)
T ss_pred HhhheeeCCC-------C------chHHHHHHHHHHHHHHHHHHHeeeee
Confidence 9999887621 1 12356666777666666554444433
No 199
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.06 E-value=2.2e-09 Score=95.61 Aligned_cols=169 Identities=17% Similarity=0.184 Sum_probs=121.7
Q ss_pred hhhHHHHHHHHHHhHhcchhhchhHHHH-HHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHH
Q 013453 40 ITELFSIWIIVLCTALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (442)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~ 118 (442)
.++.+.+++.++...-+.-.+...+|.+ .++|+.++.+ .|.+...+.+...+..+.+|+++||+|.+|++...
T Consensus 217 ~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~------Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~ 290 (417)
T COG2223 217 NKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVT------AGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAV 290 (417)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhh------HHHHHHHHHHHHHHHHhccchhhhhccchhHHHHH
Confidence 3445555555555555555555666654 5779999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcc-------chHHHHHH----HHHHHHhhcchhhHHHHHhhhhccccchhhhhhhhhHhhhhHHHHHH
Q 013453 119 TASVVIFNTLFGLS-------VNFWMAVL----TRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGP 187 (442)
Q Consensus 119 ~~~~~i~~~~~~~a-------~~~~~l~~----~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 187 (442)
...+.++..+.... .+....++ ..++.|+|.|. +..++..++|+ +-|.+.|+..+..++|...-|
T Consensus 291 f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGs---vfk~Ip~if~~-~~G~v~G~vga~G~lGGf~lp 366 (417)
T COG2223 291 FVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGS---VFKMIPVIFPK-ETGAVTGIVGAIGGLGGFFLP 366 (417)
T ss_pred HHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcch---heeechHHHHh-hhhHHHHHHHHhccccccchh
Confidence 98888888877665 33444444 44555555444 35666676664 788899999999999999999
Q ss_pred HhhhhhccccccCCCcccccccccCCcChhHHHHHHHHHHHHHHHH
Q 013453 188 ALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAA 233 (442)
Q Consensus 188 ~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (442)
..-+...+.. | .+...+.+.....+++.+..
T Consensus 367 ~~~g~~~~~t-------g--------~~~~~f~~~~~~~~~a~v~~ 397 (417)
T COG2223 367 LAFGVSLDLT-------G--------SYTGAFMLLLAFYLVALVLT 397 (417)
T ss_pred HHHHHHHHhc-------c--------cHHHHHHHHHHHHHHHHHHH
Confidence 8888888732 1 24444455555555555443
No 200
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.05 E-value=2.5e-09 Score=102.99 Aligned_cols=142 Identities=17% Similarity=0.142 Sum_probs=114.6
Q ss_pred HHHHHhHhcchhhchhHHHHH-HHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHH
Q 013453 48 IIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFN 126 (442)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~ 126 (442)
+..+.............|.+. +.+|.++.+ .|+....+.++..++.++.|++.||+|+|+.+..+.++..++.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~------ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~ 339 (495)
T PRK14995 266 VMAMTAMITLVGFELLMAQELQFVHGLSPLE------AGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSF 339 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHH
Confidence 333333333333444556554 457899988 9999999999999999999999999999999998888887777
Q ss_pred HHHhc---cchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhcc
Q 013453 127 TLFGL---SVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 127 ~~~~~---a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (442)
++... .++.+...+..++.|++.|...+ ....+.+..|+++++.+.++.+....+|..+|+.+.+.+.+
T Consensus 340 ~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 340 YGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65543 34566667788999999888776 57888888999999999999999999999999999998876
No 201
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.05 E-value=3.6e-09 Score=98.78 Aligned_cols=123 Identities=18% Similarity=0.239 Sum_probs=94.1
Q ss_pred chhHHHH-HHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhcc-----ch
Q 013453 61 FPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS-----VN 134 (442)
Q Consensus 61 ~~~~~~~-~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a-----~~ 134 (442)
....|.+ .+++|.++.+ .+++.+...++..++.++.|++.||+|||+.+..+..+..++.++..+. ++
T Consensus 226 ~~~~~~~~~~~~g~~~~~------~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (385)
T TIGR00710 226 FSGAPFVYIDIMGVSPSV------FGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGS 299 (385)
T ss_pred HHcChHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccch
Confidence 3344544 4578988888 9999999999999999999999999999999988888777776665543 23
Q ss_pred HHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhh-HHHHHHHhh
Q 013453 135 FWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGI-GLIIGPALG 190 (442)
Q Consensus 135 ~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~ 190 (442)
...+++..++.|++.+...+ ......|..| ++|+++.++.+..... |.+.+|.++
T Consensus 300 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~ 356 (385)
T TIGR00710 300 WAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVS 356 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556667788888887777 4777788776 6799999988776654 555555544
No 202
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.05 E-value=1.3e-07 Score=92.49 Aligned_cols=157 Identities=15% Similarity=0.155 Sum_probs=115.4
Q ss_pred hhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcc-cCCchhhHHHHHHHHHHHHHHhccch------
Q 013453 62 PFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPVIIMGTASVVIFNTLFGLSVN------ 134 (442)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~~~~~~~~~~i~~~~~~~a~~------ 134 (442)
.....+.+.+|.++++ ...+...+....-+..+++|+++|+ +||+++++++.++..++..+.+++..
T Consensus 9 iLvlYl~~~lg~~~~~------A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~ 82 (654)
T TIGR00926 9 ILVLYFLNFLGFSEST------STVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHP 82 (654)
T ss_pred HHHHHHHHHcCCcHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccc
Confidence 3344556678888888 7888888888888999999999997 79999999999999999988776421
Q ss_pred --HHHHHHHHHHHHhhcchhhHH-HHHhhhhcccc---chhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCcccccc
Q 013453 135 --FWMAVLTRFLLGSLNGLLGPI-KAYACEIFREE---HQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSES 208 (442)
Q Consensus 135 --~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~---~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~ 208 (442)
....+++-.+..+|.|..-|+ .+...|.++++ +|-..+.++..+.++|+.+++.+.+++.+....+..
T Consensus 83 ~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~------ 156 (654)
T TIGR00926 83 LHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGC------ 156 (654)
T ss_pred hHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc------
Confidence 233556667777788888884 99999999754 366788899999999999999999988752110000
Q ss_pred cccCCcChhHHHHHHHHHHHHHHHH
Q 013453 209 LFGKFPYFLPCLCISLFAFGVTIAA 233 (442)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (442)
..+|...+.+.++..++.++..
T Consensus 157 ---~~~~~~aF~i~~i~m~ia~lvf 178 (654)
T TIGR00926 157 ---QDCYPLAFGVPAILMILALIVF 178 (654)
T ss_pred ---CcchHHHHHHHHHHHHHHHHHH
Confidence 2245555566665555554443
No 203
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=99.05 E-value=2.2e-08 Score=87.54 Aligned_cols=364 Identities=13% Similarity=0.042 Sum_probs=196.2
Q ss_pred CCChhhHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhc-----ccCC
Q 013453 37 GLPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD-----RYGR 111 (442)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~d-----r~Gr 111 (442)
+..++++..+.+...+++...+... .+|.+.+.-|.|.++ .+...-+ ... ..--++|.++.| |+||
T Consensus 27 ~~d~~~illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~------~a~fS~a-y~P-~sLKllWaPiVDs~y~k~~Gr 97 (510)
T KOG3574|consen 27 KGDRSSILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTS------QAIFSFA-YWP-FSLKLLWAPIVDSVYSKRFGR 97 (510)
T ss_pred hhhhhhHHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhh------hhhhhhh-hhH-HHHHHHHHhhhHHHHHHhhcc
Confidence 3445677888888999999988888 899999988888776 4443222 222 233568889999 9999
Q ss_pred chhhHH-HHHHHHHHHHHHhc-----------cchHHHHHHHHHHHHhhcchhhHH-HHHhhhhccccchhhhhhhhhHh
Q 013453 112 KPVIIM-GTASVVIFNTLFGL-----------SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTA 178 (442)
Q Consensus 112 r~~~~~-~~~~~~i~~~~~~~-----------a~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~ 178 (442)
||.-++ +..+.+....+.+. .++...+....++.-+..+....+ -.+.-....+++.|-+......+
T Consensus 98 rksWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg 177 (510)
T KOG3574|consen 98 RKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVG 177 (510)
T ss_pred ccceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHH
Confidence 988654 23333333333322 234444444556666666776663 66777777788888877777777
Q ss_pred hhhHHHHHHHhhhhhccccccCCCccccc--ccccCCcChhHHHHHHHHHHHHHHHHhhccccCCCCCCCCccchhhhhh
Q 013453 179 WGIGLIIGPALGGFLAQPAEKYPNLFSSE--SLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDA 256 (442)
Q Consensus 179 ~~~g~~~g~~~~~~l~~~~~~~~~~~gw~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 256 (442)
...|.+++..+--.+....-..+...+|. ..+-..+ -...+-+...+++-....+.+++++....++. ..
T Consensus 178 ~~~GyfL~~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~--gy~~fwg~~~~vat~Lv~~~kke~~~~~~~e~-~~----- 249 (510)
T KOG3574|consen 178 QTAGYFLGNVVFLALESPDFCNTYLRSIPLDQGFITLA--GYLWFWGALFIVATTLVALLKKENDESVDEEL-EL----- 249 (510)
T ss_pred HhhhHHhhcceeeEecChhhhhHHHhcCcCccceEEhh--HHHHHHHHHHHHHHHHHHHhcCCCchhhhhhh-hc-----
Confidence 77777766554333322100000112222 0000000 00122233333333333333332222111000 00
Q ss_pred hhhhhhhhhhhhcccccccccccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHH
Q 013453 257 LESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSL 336 (442)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (442)
..++..+..+++++-|............-..+.+-.+..++-+. +.|++..+.++...+.--..
T Consensus 250 ----------~i~~~yk~l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLl------e~Gv~ke~Lal~~v~~~plq 313 (510)
T KOG3574|consen 250 ----------GIHESYKLLRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLL------EHGVPKEELALIAVPLVPLQ 313 (510)
T ss_pred ----------CHHHHHHHHHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHH------HcCCChhHheeeeeehhhHH
Confidence 00011223456677777776666666655555555555554433 35888888777665444455
Q ss_pred HHHHhhHHHHHHHhhc-----hhHHHHHHHHHHHHHHHHHHHHHHhhc------hhhHHHHHHHHHHHHHHHHHHHHhhh
Q 013453 337 LVFQLSLYPFLERILG-----PIMVARIAGVLTIPLLTSYPYIAMLSG------FGLAFLLNCASVVKNLLSVSIITGLF 405 (442)
Q Consensus 337 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (442)
++....++++..+... |....++........ +..+.+.... ....++.+....+...+....+....
T Consensus 314 I~l~~~~gk~ta~~~pl~~~lka~~~R~~~~~~~t~--Lv~~~~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv~~m 391 (510)
T KOG3574|consen 314 IALPLYIGKWTAGPRPLNVFLKAVPYRLGGGLVQTA--LVWWTPTLGHSDGTFPRGYYILLITSYAFHQVFVTSMFVSGM 391 (510)
T ss_pred HhhhhhheeecCCCCcchHHHHhhhHHHHHHHHHHH--HHhhhcccccCCCceeechHHHHHHHHHHhhhHHHHHHHHHH
Confidence 5555556655553211 111222222222221 1112221111 12333344444555555556666677
Q ss_pred hhhcccCChhhhhHHHHHHHHHHHHHHhhh
Q 013453 406 ILQNRAVDQDQRGAANGIAMTGMSLFKAAG 435 (442)
Q Consensus 406 ~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g 435 (442)
+..+++.||...|+.+.+.|+..++|+-.-
T Consensus 392 af~aqisdp~iggTymTlLNTLsnLGg~wp 421 (510)
T KOG3574|consen 392 AFHAQISDPAIGGTYMTLLNTLSNLGGNWP 421 (510)
T ss_pred HHHhhcCCcccCccHHHHHHHHHHhcCCcH
Confidence 888899999999999999999999987543
No 204
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.04 E-value=3.9e-09 Score=112.43 Aligned_cols=147 Identities=14% Similarity=0.092 Sum_probs=116.2
Q ss_pred HHHHHHHHHHhHhcchhhchhHHHHHH-HhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHH
Q 013453 43 LFSIWIIVLCTALPISSLFPFLYFMIK-DFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (442)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~ 121 (442)
++...+..++..+....+...+|.+.+ .+|.+..+ .|++.+.+.++..+++++.|+++|+.++++.+..+.++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~------~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~ 300 (1140)
T PRK06814 227 IWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENV------ATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALL 300 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHH------HHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHH
Confidence 333334333334444444556676665 47888888 99999999999999999999999998887777766666
Q ss_pred HHHHHHHHhcc--------------------chHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhh
Q 013453 122 VVIFNTLFGLS--------------------VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWG 180 (442)
Q Consensus 122 ~~i~~~~~~~a--------------------~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~ 180 (442)
.+++.+..++. ++.+.+++..++.|++.+...+ ..+++.+.+|+++||+++|..+....
T Consensus 301 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~ 380 (1140)
T PRK06814 301 MGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNA 380 (1140)
T ss_pred HHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHH
Confidence 66555544432 6778888888999999888877 59999999999999999999999999
Q ss_pred hHHHHHHHhhhhhcc
Q 013453 181 IGLIIGPALGGFLAQ 195 (442)
Q Consensus 181 ~g~~~g~~~~~~l~~ 195 (442)
+|..+++++.+.+.+
T Consensus 381 ~~~~ig~~~~g~l~~ 395 (1140)
T PRK06814 381 AFMVAGTIILALLQA 395 (1140)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999999874
No 205
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=99.04 E-value=1.3e-08 Score=91.50 Aligned_cols=147 Identities=21% Similarity=0.315 Sum_probs=109.6
Q ss_pred hhHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhc----ccCCchhhH
Q 013453 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD----RYGRKPVII 116 (442)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~d----r~Grr~~~~ 116 (442)
+.++.+....+..-++...-....+.+.+++|++... .+.+--...+...+.+|+.|..+| ||||||.++
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~lGvphk~------~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI 105 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQSLGVPHKW------SSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFI 105 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHHcCCCccc------ccccccccccccceecccccccccccccccccccchH
Confidence 4555555555555666666667778889999999988 788888888888999999999999 599988887
Q ss_pred HH-HHHHHHHHHHHhccchHH-----------------HHHHHHHHHHhhc-chhhHHHHHhhhhccccchhh-hhhhhh
Q 013453 117 MG-TASVVIFNTLFGLSVNFW-----------------MAVLTRFLLGSLN-GLLGPIKAYACEIFREEHQAL-GLSTVS 176 (442)
Q Consensus 117 ~~-~~~~~i~~~~~~~a~~~~-----------------~l~~~r~l~G~~~-g~~~~~~~~i~~~~~~~~r~~-~~~~~~ 176 (442)
.. .+...++.++.+++.++. .++++-.+.-++. -...|+.+++.|...++++.+ +.+.+.
T Consensus 106 ~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~ 185 (498)
T KOG0637|consen 106 LAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFS 185 (498)
T ss_pred HHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHH
Confidence 65 455666667777765432 2333444444443 445678999999998877777 999999
Q ss_pred HhhhhHHHHHHHhhhhh
Q 013453 177 TAWGIGLIIGPALGGFL 193 (442)
Q Consensus 177 ~~~~~g~~~g~~~~~~l 193 (442)
...++|..+|-.+++++
T Consensus 186 ~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 186 FFMAVGNVLGYALGSYL 202 (498)
T ss_pred HHHHhcceeeeeccccc
Confidence 99999999888887644
No 206
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.03 E-value=8.6e-09 Score=86.51 Aligned_cols=123 Identities=20% Similarity=0.272 Sum_probs=99.6
Q ss_pred HHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHH-HHHHHHhccchHHHHHHHHHH
Q 013453 66 FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVV-IFNTLFGLSVNFWMAVLTRFL 144 (442)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~-i~~~~~~~a~~~~~l~~~r~l 144 (442)
.+.+++|.|..+ .+.+.+....-.++.+++.|.++||+|++...+.+..+.. ++-....+ +++.=+++..+
T Consensus 290 fF~~rfGlS~~~------a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~F--t~lsPy~~m~~ 361 (459)
T KOG4686|consen 290 FFQKRFGLSAVS------AGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFF--TFLSPYTSMTF 361 (459)
T ss_pred HHHHhhCCChhh------ccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHh--hhccHHHHHHH
Confidence 567899999999 8888888888888999999999999999988777654443 33333333 23333455677
Q ss_pred HHhhcchhhHH-HHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccc
Q 013453 145 LGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (442)
Q Consensus 145 ~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 196 (442)
.|+.......+ ...++...|+++.|++.+..+...++|..+.|++++.+.+.
T Consensus 362 lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~ 414 (459)
T KOG4686|consen 362 LGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADG 414 (459)
T ss_pred HhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecC
Confidence 88887777764 77888889999999999999999999999999999999984
No 207
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.03 E-value=5.6e-09 Score=97.69 Aligned_cols=119 Identities=12% Similarity=0.062 Sum_probs=85.1
Q ss_pred HHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhccchHHHHHHHHHHHH
Q 013453 67 MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLG 146 (442)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~r~l~G 146 (442)
+.+++|.++.+ .+.+.+...++..++.++.|++.||+|||+++..+..+..++.++..+.++.+..+..-.+.+
T Consensus 230 ~~~~~g~~~~~------~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 303 (392)
T PRK10473 230 LMEQMGFSRGE------YAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGITLIC 303 (392)
T ss_pred HHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34678888888 899999999999999999999999999999999999988888888877766554444444444
Q ss_pred hhcchhhHHHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhcc
Q 013453 147 SLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 147 ~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (442)
.+.+...+. ....+..|.++|+ +......+++..+++.+++++.+
T Consensus 304 ~g~~~~~~~-~~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~ 348 (392)
T PRK10473 304 AGFSVGFGV-AMSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAA 348 (392)
T ss_pred HHHHHHhHH-HHHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHH
Confidence 443333221 2223344544443 44445556777777888888776
No 208
>PRK09848 glucuronide transporter; Provisional
Probab=99.02 E-value=1.8e-09 Score=102.89 Aligned_cols=147 Identities=16% Similarity=0.144 Sum_probs=108.4
Q ss_pred HHHHHHHHHHhHhcchhhchhHHHHHH-HhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHH
Q 013453 43 LFSIWIIVLCTALPISSLFPFLYFMIK-DFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (442)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~ 121 (442)
+....+..++............|.+.+ .+|.+... .++......++..++.++++++.||+|+|+++.++.++
T Consensus 230 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~ 303 (448)
T PRK09848 230 LFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLF------TVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALL 303 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 343444444444444444444554443 35554433 44445555677888999999999999999999999988
Q ss_pred HHHHHHHHhccc--hHHHHHHHHHHHHhhcchhhH-HHHHhhhhcccc-------chhhhhhhhhHhhhhHHHHHHHhhh
Q 013453 122 VVIFNTLFGLSV--NFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREE-------HQALGLSTVSTAWGIGLIIGPALGG 191 (442)
Q Consensus 122 ~~i~~~~~~~a~--~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~-------~r~~~~~~~~~~~~~g~~~g~~~~~ 191 (442)
..++.++..+.+ +++.+++..++.|+|.+...+ ..++.+|..|.+ ++|...+..+....+|..+|+.+.+
T Consensus 304 ~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g 383 (448)
T PRK09848 304 GTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPA 383 (448)
T ss_pred HHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 888877776643 677777778889999888777 488888887654 4588899999999999999999999
Q ss_pred hhcc
Q 013453 192 FLAQ 195 (442)
Q Consensus 192 ~l~~ 195 (442)
.+.+
T Consensus 384 ~~l~ 387 (448)
T PRK09848 384 FILG 387 (448)
T ss_pred HHHH
Confidence 9886
No 209
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.02 E-value=1.4e-08 Score=94.91 Aligned_cols=122 Identities=13% Similarity=0.092 Sum_probs=100.6
Q ss_pred HHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhccchHHHHHHHHHHH
Q 013453 66 FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLL 145 (442)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~r~l~ 145 (442)
.+.+.+|.++.+ .|++.+...++..+++++.+++.||+++|+++..+. +.++...+.++.++++...+..++.
T Consensus 231 ~~~~~lg~s~~~------~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (393)
T PRK11195 231 WAPVALGITLNQ------PAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGI-LMGLVVLLMALQHSLLPAYPLLILI 303 (393)
T ss_pred HHHHHcCCChhH------HHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHH-HHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 345568999988 999999999999999999999999999999888775 3445555556677777777888899
Q ss_pred HhhcchhhH-HHHHhhhhccccc-hhhhhhhhhHhhhhHHHHHHHhhhhhc
Q 013453 146 GSLNGLLGP-IKAYACEIFREEH-QALGLSTVSTAWGIGLIIGPALGGFLA 194 (442)
Q Consensus 146 G~~~g~~~~-~~~~i~~~~~~~~-r~~~~~~~~~~~~~g~~~g~~~~~~l~ 194 (442)
|++.+...+ ..+.+.|..|++. +|++.++.+....+|..++..+.+.+.
T Consensus 304 G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~ 354 (393)
T PRK11195 304 GALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLV 354 (393)
T ss_pred HHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 998888766 5777888766554 799999999999999999999998664
No 210
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.00 E-value=1.7e-07 Score=86.36 Aligned_cols=326 Identities=14% Similarity=0.049 Sum_probs=188.0
Q ss_pred HHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhcchhhHH-HHHhhhhcccc
Q 013453 88 GSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREE 166 (442)
Q Consensus 88 ~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~ 166 (442)
.++......++.++.+.+.|+.|.|+.+.++...+....+.+-+-+ -+-++..-.+.|+|.+..+.. -.+++|..+++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~N-~y~~yfssallG~Gaallw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFPN-SYYLYFSSALLGFGAALLWTGQGGYLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhcc-hHHHHHHHHHhhhhHHheecccceehhhcCChh
Confidence 6777788889999999999999999999999999988887777654 556777889999999999986 88999999999
Q ss_pred chhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCC-ccccc-ccccC--CcChhHHHHHHHHHHHH--HHHHhhccccC
Q 013453 167 HQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPN-LFSSE-SLFGK--FPYFLPCLCISLFAFGV--TIAAFWLPETL 240 (442)
Q Consensus 167 ~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~-~~gw~-~~~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~e~~ 240 (442)
.+.+..++.-+....+.++|..+-..+....+.... ..+-+ ..+.. .......+....+.+.. .+...+.|.+.
T Consensus 135 tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~p~~~ 214 (461)
T KOG3098|consen 135 TIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDFLPSKD 214 (461)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheeecCccc
Confidence 999999998888888888887666555442221100 00100 00000 00001111111111111 11111222211
Q ss_pred CCCCCCCccchhhhhhhhhhhhhhhhhhcccccccccccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccC
Q 013453 241 HRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNY 320 (442)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (442)
.. ..++..+.. ..+..+...+++++++...+...++...+...-+.+.+|..+... ...+.
T Consensus 215 ~~-~~~~~~~~~---------------~~~~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft---~~~~~ 275 (461)
T KOG3098|consen 215 VV-NCKSSSETS---------------FSELLKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFT---RKLGS 275 (461)
T ss_pred hh-hhhhhcccc---------------HHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhh---hhccC
Confidence 10 000000000 111122334567777777666665555444444444444433221 11222
Q ss_pred Ch-hHHHHHHHHHHHHHHHHHhhHHHHHHH---hhchhHHHHHHHHHHHHHHHHHHHHHHhhch------------hhHH
Q 013453 321 ST-QMVGEVLAITGFSLLVFQLSLYPFLER---ILGPIMVARIAGVLTIPLLTSYPYIAMLSGF------------GLAF 384 (442)
Q Consensus 321 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~ 384 (442)
+. ...++.....+++.++++. ....+.| ++|+++.+.++..+..+.+.+.........+ ....
T Consensus 276 n~~~~~ai~~~~~g~g~v~~g~-~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~ 354 (461)
T KOG3098|consen 276 NTTYLIAIYSIGIGLGEVIGGL-DFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYY 354 (461)
T ss_pred cchhHHHHHHHHHhHHHHHHHH-HHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchh
Confidence 22 2345555556777777666 4444443 3567777777776666665554332211110 1133
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhh
Q 013453 385 LLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAG 435 (442)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g 435 (442)
...+..+..+..=.......+.+..... +++|.++.++.-.-+.++..++
T Consensus 355 ~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~ 404 (461)
T KOG3098|consen 355 LALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVA 404 (461)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHH
Confidence 4455555556666666777788888877 5788888888877777766554
No 211
>PRK11043 putative transporter; Provisional
Probab=99.00 E-value=1.1e-08 Score=96.11 Aligned_cols=129 Identities=10% Similarity=0.034 Sum_probs=98.5
Q ss_pred hchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHH---hc--cch
Q 013453 60 LFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLF---GL--SVN 134 (442)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~---~~--a~~ 134 (442)
.....|.+.+++|.+..+ .|+......++..++.+..+++.||+|+|+.+....+..+++.+.. .. .++
T Consensus 222 ~~~~~p~~~~~~g~s~~~------~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (401)
T PRK11043 222 WLTGSPFILEQMGYSPAD------IGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPS 295 (401)
T ss_pred HHHHhHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCc
Confidence 334567777888998888 8988888889999999999999999999987766555544443322 22 345
Q ss_pred HHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhcc
Q 013453 135 FWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 135 ~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (442)
.+.+++...+.|++.+...+ ..+...|..| ++|+++.++.+.....+...++.+.+.+.+
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~ 356 (401)
T PRK11043 296 LVPLLIPFCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALIS 356 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 56666667778888888777 4667677765 579999999999888888888888888875
No 212
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.99 E-value=2.1e-08 Score=92.38 Aligned_cols=144 Identities=12% Similarity=0.049 Sum_probs=97.6
Q ss_pred hhHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCc---hhhHH
Q 013453 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRK---PVIIM 117 (442)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr---~~~~~ 117 (442)
+.++.+++..++.......+...+|.+.++.|.+. + .+...++..+...++ .++++||.+|| +....
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~g~s~-~------~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~ 261 (368)
T TIGR00903 192 KDLWIIGAILGFGVALFDNLAIWLEAALRPAGLED-I------AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIR 261 (368)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCh-H------HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHH
Confidence 34555666666666666667778899988877664 3 455555555544444 46777776543 33332
Q ss_pred -HHHHHHHHHHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhc
Q 013453 118 -GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (442)
Q Consensus 118 -~~~~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 194 (442)
..++.++.....++..+....++.-.+.|++.....+ ..++.+|.+|++.|+++.|+.+....+|.+++|.+.+.+.
T Consensus 262 ~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~ 340 (368)
T TIGR00903 262 AAALLIAAFFLALAFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFI 340 (368)
T ss_pred HHHHHHHHHHHHHHHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHh
Confidence 3444444444445555555545555566666555555 5789999999999999999999999999999999988776
No 213
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.99 E-value=7e-07 Score=83.49 Aligned_cols=288 Identities=8% Similarity=0.113 Sum_probs=159.3
Q ss_pred hhhHHHHHHHHHHhHhcchhhchhHHHHHHHhcccc-----cchhhhhHHHHHHHHHHHHHHhh-hhhhhhhhcccCCch
Q 013453 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAK-----REEDIGSYAGYVGSSFMFGRALT-SVFWGLVADRYGRKP 113 (442)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~g~~~s~~~~~~~~~-~~~~G~l~dr~Grr~ 113 (442)
.++++...+..|+..+.++ .+-.+.+.+..+. +. ..++-+...+...+. .++.+++++|++|++
T Consensus 6 ~~k~~~~~l~fF~il~~Y~----iLR~lKD~lvv~~~~~gae~------i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~ 75 (472)
T TIGR00769 6 LKKFLPLFLMFFCILFNYT----ILRDTKDTLVVTAKGSGAEI------IPFLKTWVVVPMAVIFMLIYTKLSNILSKEA 75 (472)
T ss_pred HHHHHHHHHHHHHHHHHHH----HHHhhhhheeecccCCchhh------HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 3445555555555554433 4445566666632 34 888888887776666 899999999999999
Q ss_pred hhHHHHHHHHHHHHHHhcc----c---------------------------hHHHHHHHHHHHHhhcchhhH-H-HHHhh
Q 013453 114 VIIMGTASVVIFNTLFGLS----V---------------------------NFWMAVLTRFLLGSLNGLLGP-I-KAYAC 160 (442)
Q Consensus 114 ~~~~~~~~~~i~~~~~~~a----~---------------------------~~~~l~~~r~l~G~~~g~~~~-~-~~~i~ 160 (442)
++.+....+....+++++. + +.|..-+..+...+-...... . ..+..
T Consensus 76 lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fan 155 (472)
T TIGR00769 76 LFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFAN 155 (472)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988777777766666553 1 122333333444444333333 3 78899
Q ss_pred hhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCcccccccccCCcCh----hHHHHHHHHHHHHHHHHhhc
Q 013453 161 EIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYF----LPCLCISLFAFGVTIAAFWL 236 (442)
Q Consensus 161 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 236 (442)
|.++.+|-.|.+++++.+.++|..+++.+..++.+.....+.. ..+|. ....+.++..++.+.+.+++
T Consensus 156 di~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~i~~~~~~~~~~~~~~l 227 (472)
T TIGR00769 156 QITTIDEAKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPG--------VDGWHVSLKNLMVIVICSGLAIILLYWWV 227 (472)
T ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccc--------cChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999988887421111000 11221 12233333334444444444
Q ss_pred cccCCCCCCCCccchhhhhhhhhhhhhhhhhhcccccccccccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccC
Q 013453 237 PETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLG 316 (442)
Q Consensus 237 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (442)
.+....+ ++. .+. ++ .+++++.+.....+.+.++++|.++...+...++...........-......
T Consensus 228 ~~~~~~~-~~~--~~~--~~----~~~k~k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~---- 294 (472)
T TIGR00769 228 NRNVLTD-PRS--YNP--AL----KEKKVKPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQ---- 294 (472)
T ss_pred HhcccCC-ccc--cch--hh----ccccCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----
Confidence 3222111 100 000 00 0000111112234566788899887766666665444433332222111111
Q ss_pred cccCChh----HHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHH
Q 013453 317 GLNYSTQ----MVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAG 361 (442)
Q Consensus 317 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (442)
+ -++. -.|......++..++.+++. +.+.||+|-+....+.-
T Consensus 295 -~-p~~~~~~~f~g~~~~~~gi~tl~~~l~~-~~l~~~~Gw~~~a~i~P 340 (472)
T TIGR00769 295 -Y-PSPNEYSAFMGDFSTWTGVVSVTMMLLS-GNVIRKYGWLTAALITP 340 (472)
T ss_pred -C-CCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhhHHHHHHHHH
Confidence 1 1222 23444555566666666644 77777777665544433
No 214
>PRK10133 L-fucose transporter; Provisional
Probab=98.97 E-value=1.3e-08 Score=96.13 Aligned_cols=118 Identities=12% Similarity=0.038 Sum_probs=96.1
Q ss_pred HHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhh
Q 013453 69 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSL 148 (442)
Q Consensus 69 ~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~r~l~G~~ 148 (442)
+.+|.++.+ .++....+.++..++.++.|++.||+|||+++..+.++..+..++..+.++.. .+..-.+.|++
T Consensus 288 ~~~g~s~~~------ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~glg 360 (438)
T PRK10133 288 EIPGMTAGF------AANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHV-GLIALTLCSAF 360 (438)
T ss_pred hcCCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHHHH
Confidence 467999998 99999999999999999999999999999999988887777766666666543 34556788999
Q ss_pred cchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhcc
Q 013453 149 NGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 149 ~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (442)
.+...| ..+...|..++ +.+.+.++... ..+|..++|.+.|.+.+
T Consensus 361 ~~~i~P~~~s~a~~~~~~-~~~~as~l~~~-~~~g~~~~~~i~G~l~~ 406 (438)
T PRK10133 361 MSIQYPTIFSLGIKNLGQ-DTKYGSSFIVM-TIIGGGIVTPVMGFVSD 406 (438)
T ss_pred HHHHHHHHHHHHHcccch-hhccchhHHhH-HhccchHHHHHHHHHHH
Confidence 999988 58888888765 46677777764 44678888899998887
No 215
>PRK09669 putative symporter YagG; Provisional
Probab=98.95 E-value=3.5e-09 Score=100.71 Aligned_cols=112 Identities=19% Similarity=0.260 Sum_probs=88.9
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhc--cchHHHHHHHHHHHHhhcchhhHH-HHHhh
Q 013453 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL--SVNFWMAVLTRFLLGSLNGLLGPI-KAYAC 160 (442)
Q Consensus 84 ~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~--a~~~~~l~~~r~l~G~~~g~~~~~-~~~i~ 160 (442)
.+.+.....+...++.+++++++||+|+|+.+..+.++..+......+ .++.+.+++..++.|++.+...+. .++++
T Consensus 266 ~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~a 345 (444)
T PRK09669 266 ATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFS 345 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666777888899999999999999999999887766654433222 357777888889999998888884 88999
Q ss_pred hhccc-------cchhhhhhhhhHhhhhHHHHHHHhhhhhcc
Q 013453 161 EIFRE-------EHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 161 ~~~~~-------~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (442)
|..+. ++.|...+..+....+|..+|+.+++.+.+
T Consensus 346 d~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~ 387 (444)
T PRK09669 346 DVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILA 387 (444)
T ss_pred hhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88762 234566788888999999999999999987
No 216
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.95 E-value=7.7e-09 Score=99.03 Aligned_cols=149 Identities=11% Similarity=0.037 Sum_probs=106.7
Q ss_pred hhHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHH
Q 013453 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (442)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~ 120 (442)
+.+..+....++............+.+.+....+... .+++.+...++..++.+++++++||+|+|+.+.++..
T Consensus 231 ~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~~~~~------~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~ 304 (473)
T PRK10429 231 DQLSCLLGMALAYNIASNIINGFAIYYFTYVIGDADL------FPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASI 304 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhheeeEEEEECCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHH
Confidence 3344444444444444444444444444443333444 6777777778899999999999999999999998887
Q ss_pred HHHHHHHHHhc-----cchHHHHHHHHHHHHhhcchhhH-HHHHhhhhcc-------ccchhhhhhhhhHhhhhHHHHHH
Q 013453 121 SVVIFNTLFGL-----SVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFR-------EEHQALGLSTVSTAWGIGLIIGP 187 (442)
Q Consensus 121 ~~~i~~~~~~~-----a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~ 187 (442)
+..++.+...+ .++.+.+++.-++.|++.+...+ ..++++|..+ +++.|..++......-+|..+++
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~ 384 (473)
T PRK10429 305 FPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAA 384 (473)
T ss_pred HHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHH
Confidence 76666554432 34566777777888998887777 4889998865 33445688999999999999999
Q ss_pred Hhhhhhcc
Q 013453 188 ALGGFLAQ 195 (442)
Q Consensus 188 ~~~~~l~~ 195 (442)
.+.|++.+
T Consensus 385 ~i~g~~l~ 392 (473)
T PRK10429 385 FFIGVVLG 392 (473)
T ss_pred HHHHHHHH
Confidence 99999987
No 217
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.92 E-value=2.6e-08 Score=92.93 Aligned_cols=147 Identities=19% Similarity=0.135 Sum_probs=94.5
Q ss_pred hHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHH
Q 013453 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (442)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~ 121 (442)
+.+.+++..+..+..+......+|.+.++ ..+... .........+...+..+++|+++||+|+||++.++.+.
T Consensus 253 ~~Wllslly~~tFG~fvg~s~~lp~~~~~-~~~~~~------~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~ 325 (462)
T PRK15034 253 HLWLLSLLYLATFGSFIGFSAGFAMLAKT-QFPDVN------ILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIF 325 (462)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHH-HcChHH------HHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHH
Confidence 34555555555555555455566666554 222222 22233445677889999999999999999999998887
Q ss_pred HHHHHHHHh-cc-----chHHHHHHHHHHHHhhcchhhH-HHHHhhhhccc---------------------cchhhhhh
Q 013453 122 VVIFNTLFG-LS-----VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFRE---------------------EHQALGLS 173 (442)
Q Consensus 122 ~~i~~~~~~-~a-----~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~---------------------~~r~~~~~ 173 (442)
..+...... .. .+++.+.+..+...++.|.-.. ...++.+.+|+ ++-|.+.|
T Consensus 326 ~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G 405 (462)
T PRK15034 326 MAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALG 405 (462)
T ss_pred HHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHH
Confidence 777664322 11 2466666655444444444433 35666666663 24567788
Q ss_pred hhhHhhhhHHHHHHHhhhhhcc
Q 013453 174 TVSTAWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 174 ~~~~~~~~g~~~g~~~~~~l~~ 195 (442)
+.++...+|..+-|.+-+...+
T Consensus 406 ~v~a~G~~Ggf~~p~~~g~~~~ 427 (462)
T PRK15034 406 FISAIGAVGGFFIPQAFGMSLN 427 (462)
T ss_pred HHHHHHHcccchhhHHHHHHHH
Confidence 9999999998898977777766
No 218
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.91 E-value=6.6e-08 Score=87.18 Aligned_cols=143 Identities=30% Similarity=0.467 Sum_probs=118.6
Q ss_pred HHHHHHhHhcchhhchhHHHHHHHhcccc--cchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHH
Q 013453 47 WIIVLCTALPISSLFPFLYFMIKDFQIAK--REEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (442)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i 124 (442)
....+....+.....+..+.+.++++.+. .. .++..+.+.++..++.++.|.++||+|||+.+..+.....+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~ 81 (338)
T COG0477 8 ALAALLLGLDLGLLSPALPLLLSTLSLSSGRLL------YGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLL 81 (338)
T ss_pred HHHHHHHHHhcchHHHHHHHHHHHcCCCchhHH------HHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHH
Confidence 33444444666667778888888887776 36 89999999999999999999999999999888888876666
Q ss_pred HHHHHhccch--HHHHHHHHHHHHhhcchhhH-HHHHhhhhccc-cchhhhhhhhhH-hhhhHHHHHHHhhhhhcc
Q 013453 125 FNTLFGLSVN--FWMAVLTRFLLGSLNGLLGP-IKAYACEIFRE-EHQALGLSTVST-AWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 125 ~~~~~~~a~~--~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~-~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~ 195 (442)
+.++.++..+ .+.+++.|+++|++.+...+ ..+++.|+.|+ ++|+...+.... ...+|..++|.+++.+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (338)
T COG0477 82 GTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLG 157 (338)
T ss_pred HHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6677777665 99999999999999888888 59999999998 789999998888 688899999988888876
No 219
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.90 E-value=1.1e-08 Score=97.51 Aligned_cols=122 Identities=7% Similarity=-0.037 Sum_probs=105.7
Q ss_pred HHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhcc----------chHHHH
Q 013453 69 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS----------VNFWMA 138 (442)
Q Consensus 69 ~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a----------~~~~~l 138 (442)
+.+|.++.+ .|.+.....++..++....+++.+|++.|+++.++.++.+++.+..... ++.+.+
T Consensus 281 ~~lG~s~~~------~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~ 354 (468)
T TIGR00788 281 QCLPGGPSF------SGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFV 354 (468)
T ss_pred ccCCCCcch------hhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeee
Confidence 568999999 9999999999999999999999999999999999999999888665321 333445
Q ss_pred HHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccc
Q 013453 139 VLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (442)
Q Consensus 139 ~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 196 (442)
...-++.+++.+.... ...++.+..|+++++...++.+...++|..+++.+++.+.+.
T Consensus 355 ~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~ 413 (468)
T TIGR00788 355 LGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMET 413 (468)
T ss_pred eehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566888888777666 699999999999999999999999999999999999999983
No 220
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.89 E-value=3.4e-08 Score=91.92 Aligned_cols=124 Identities=18% Similarity=0.204 Sum_probs=84.4
Q ss_pred chhHHH-HHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHH---hc-cchH
Q 013453 61 FPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLF---GL-SVNF 135 (442)
Q Consensus 61 ~~~~~~-~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~---~~-a~~~ 135 (442)
....|. +.+++|.++.+ .+++.+...++..++.++.|++.||+|||+.+..+..+..+..+.. .. ..++
T Consensus 214 ~~~~~~~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (377)
T PRK11102 214 LTAGPFVYIELNGVSPQN------FGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGF 287 (377)
T ss_pred HHcCHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 333443 45668989888 9999999999999999999999999999999988876654433322 22 2345
Q ss_pred HHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHh-hhhHHHHHHHhhh
Q 013453 136 WMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTA-WGIGLIIGPALGG 191 (442)
Q Consensus 136 ~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~-~~~g~~~g~~~~~ 191 (442)
+.+.++-.+.+.+.+...+ ....+.|..| ++|+++.+..+.. ..+|..+++.+++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 288 WALVVGVAAFVGCVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLSL 344 (377)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5555444444444444444 4566777766 7899988876543 4466666666543
No 221
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.83 E-value=1.3e-07 Score=78.88 Aligned_cols=328 Identities=13% Similarity=0.056 Sum_probs=171.7
Q ss_pred HHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHH
Q 013453 50 VLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLF 129 (442)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~ 129 (442)
.++...+.....|....+.+.++....+ +|.+..+.+-..++...+.|-++|+-|||+.-+.-++-+.+++ +.
T Consensus 46 yslmmAgDWLQgPYvYyLYstYgFgkG~------IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsC-iT 118 (454)
T KOG4332|consen 46 YSLMMAGDWLQGPYVYYLYSTYGFGKGD------IGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSC-IT 118 (454)
T ss_pred HHHHHhhhhhcCceeeeeehhcCccCCc------cceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHH-Hh
Confidence 3444445566678877788889999998 8888888888888999999999999999997544443333322 23
Q ss_pred hccchHHHHHHHHHHHHhhcchhhHH--HHHhhhhccccchhhh---hh-hh----hHhhhhHHHHHHHhhhhhcccccc
Q 013453 130 GLSVNFWMAVLTRFLLGSLNGLLGPI--KAYACEIFREEHQALG---LS-TV----STAWGIGLIIGPALGGFLAQPAEK 199 (442)
Q Consensus 130 ~~a~~~~~l~~~r~l~G~~~g~~~~~--~~~i~~~~~~~~r~~~---~~-~~----~~~~~~g~~~g~~~~~~l~~~~~~ 199 (442)
-.++.+-.++++|++-|+..+....+ .-+++|.-.+ |+.- ++ .+ ..+..+=.+++.+.+..+.+
T Consensus 119 KhSpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHnek--r~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd---- 192 (454)
T KOG4332|consen 119 KHSPQYKVLMVGRVLGGIATSLLFSAFESWLIAEHNEK--RGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVD---- 192 (454)
T ss_pred hcCCceEEEeehhhhhhHHHHHHHHHHHHHHHHHhhhc--cCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHH----
Confidence 44788999999999999998887774 4567776532 3221 11 11 12334445555666666665
Q ss_pred CCCcccccccccCCcChhHHHHHHHHHHHH-HHHHhhccccCCCCCCCCccchhhhhhhhhhhhhhhhhhcccccccccc
Q 013453 200 YPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSL 278 (442)
Q Consensus 200 ~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (442)
+++ .+--.||-..+....+. .+.+.---|.-.+..++ ++... +-+...+.+
T Consensus 193 ---~~s-------lGPVAPFdAAacfLaigmAvil~~W~ENygdps~~----kdllt--------------qf~gaa~ai 244 (454)
T KOG4332|consen 193 ---TFS-------LGPVAPFDAAACFLAIGMAVILSSWSENYGDPSEN----KDLLT--------------QFKGAARAI 244 (454)
T ss_pred ---Hhc-------cCCCCchHHHHHHHHHHHHHHHhhhhhccCChhhh----HHHHH--------------HhhHhHHHH
Confidence 222 12222333332222222 22221122222111111 11100 011123345
Q ss_pred cccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhh-chhHHH
Q 013453 279 LKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL-GPIMVA 357 (442)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 357 (442)
..++++..+-....++-...+.+ .++..|....+ =...--|.+++.+.++.++++-+..+.+.+.- .-...+
T Consensus 245 aSD~ki~LLG~iqsLFE~smytF-----VFLWTPaLspn--~e~iPhGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ym 317 (454)
T KOG4332|consen 245 ASDEKIALLGAIQSLFEGSMYTF-----VFLWTPALSPN--DEEIPHGFIFATFMLASMLGSSLASRLLSRSSPKVESYM 317 (454)
T ss_pred hcchHHHHHHHHHHHHhhhhhee-----eeeecccCCCC--cccCCchhHHHHHHHHHHHhhHHHHHHHhcCCcccchHH
Confidence 55666554444444333222222 23333322211 01112577888788888888875556555432 222334
Q ss_pred HHHHHHHHHHHHHHHHHHHhh-chhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHH
Q 013453 358 RIAGVLTIPLLTSYPYIAMLS-GFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAM 425 (442)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 425 (442)
.+.+.+..+.+.+........ +......-.+..+..-......+|...-+-++..|++.|++.+-.+.
T Consensus 318 qivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEearstimNfFR 386 (454)
T KOG4332|consen 318 QIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEEARSTIMNFFR 386 (454)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHHHhhhhhhee
Confidence 444444444433322222111 11111111222222223334566777788888899999988776543
No 222
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.81 E-value=4.3e-08 Score=93.66 Aligned_cols=153 Identities=8% Similarity=0.015 Sum_probs=109.9
Q ss_pred cccch-hHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHh-hchhHH
Q 013453 279 LKNWP-LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI-LGPIMV 356 (442)
Q Consensus 279 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 356 (442)
+++|+ ++......++..+.+++...+++.|+... .++|++..+++...+...++..++.+ .++++.|| +|||+.
T Consensus 6 ~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~---~~lg~s~~~ag~~~~~~~~~~~~~~~-~~G~laDr~~G~~~~ 81 (475)
T TIGR00924 6 FGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQ---AGLGFSQEQAFIIFGAYSALVYLLTS-VGWWFGDRVWGTKKT 81 (475)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHh-hHHHHHHhhcchHHH
Confidence 34544 45555556665677777888888887532 13789999999999999999999998 66777776 899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChh---hhhHHHHHHHHHHHHHHh
Q 013453 357 ARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQD---QRGAANGIAMTGMSLFKA 433 (442)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~g~~~~~~~~g~~ 433 (442)
+..+..+..++..++.+.. ..+. ..+...+.+.+.....+....++++.+|++ +|+++.++.+...++|.+
T Consensus 82 l~~~~~~~~~g~~~~~~~~-----~~~~-~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ 155 (475)
T TIGR00924 82 MVLGGIVLMLGHFMLAMSI-----YPDL-IFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSF 155 (475)
T ss_pred HHHHHHHHHHHHHHHHhcc-----cHhH-HHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHH
Confidence 9999988888877665532 1111 222222223333345566777888888765 488899999999999999
Q ss_pred hhcccCCC
Q 013453 434 AGPAGGGA 441 (442)
Q Consensus 434 ~gp~i~G~ 441 (442)
+||.+.|+
T Consensus 156 ig~~l~g~ 163 (475)
T TIGR00924 156 ISPLLAGV 163 (475)
T ss_pred HHHHHHHH
Confidence 99998764
No 223
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.80 E-value=6.7e-08 Score=91.21 Aligned_cols=150 Identities=10% Similarity=0.028 Sum_probs=105.6
Q ss_pred cchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhh-chhHHHHH
Q 013453 281 NWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL-GPIMVARI 359 (442)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 359 (442)
.+.++..........+.+++...+++.|+... +|++..+++.+.........++.+ .++++.||+ |||+.+..
T Consensus 8 p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~-----lgls~~~a~~i~~~~~~~~~l~~l-igG~LaDRilGrrr~ili 81 (493)
T PRK15462 8 PRAIYYVVALQIWEYFSFYGMRALLILYLTNQ-----LKYDDNHAYELFSAYCSLVYVTPI-LGGFLADKVLGNRMAVML 81 (493)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHccCcHHHHHH
Confidence 34456656666666777777878888887643 689999999999888888888877 778888887 99999998
Q ss_pred HHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChh--hhhHHHHHHHHHHHHHHhhhcc
Q 013453 360 AGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQD--QRGAANGIAMTGMSLFKAAGPA 437 (442)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~~g~~~gp~ 437 (442)
+.++..++..++..... . .... .....+ ...+.....+...++++|.+|++ +|.++.++.....++|+.++|.
T Consensus 82 G~il~~lg~lll~~~~~--~-~~~~-~l~l~l-i~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~ 156 (493)
T PRK15462 82 GALLMAIGHVVLGASEI--H-PSFL-YLSLAI-IVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPI 156 (493)
T ss_pred HHHHHHHHHHHHHHhhc--c-hhHH-HHHHHH-HHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHH
Confidence 88888777654432110 0 1111 111111 11112223355677889999875 7999999999999999999999
Q ss_pred cCCC
Q 013453 438 GGGA 441 (442)
Q Consensus 438 i~G~ 441 (442)
+.|+
T Consensus 157 l~g~ 160 (493)
T PRK15462 157 ACGY 160 (493)
T ss_pred HHHH
Confidence 8875
No 224
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.76 E-value=1.2e-07 Score=91.20 Aligned_cols=157 Identities=8% Similarity=-0.042 Sum_probs=105.2
Q ss_pred cccccccch-hHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHh-hc
Q 013453 275 KKSLLKNWP-LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI-LG 352 (442)
Q Consensus 275 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 352 (442)
..+.+++|+ ++......++..+.++....+.+.|+.+ ++|++..+++............... .++++.|| +|
T Consensus 13 ~~~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~-----~lg~s~~~a~~~~~~~~~~~~~~~~-~~G~LaDr~~G 86 (500)
T PRK09584 13 SLNAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVK-----QLGMSEADSITLFSSFSALVYGLVA-IGGWLGDKVLG 86 (500)
T ss_pred ChhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHhccc
Confidence 345566664 7777777777777777777888887753 3788888887777665544444334 67888888 59
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChh--hhhHHHHHHHHHHHH
Q 013453 353 PIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQD--QRGAANGIAMTGMSL 430 (442)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~~ 430 (442)
||+.+..+..+..++..++.+... ..+ .+.+...+.+.+.....+....+..+.+|++ ++..+.++.++..++
T Consensus 87 ~r~~~~~g~~~~~ig~~l~~~~~~----~~~-~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~i 161 (500)
T PRK09584 87 TKRVIMLGAIVLAIGYALVAWSGH----DAG-IVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINI 161 (500)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcc----cHH-HHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHH
Confidence 999999988888777665554311 111 1222222223333334566667888888754 355688888999999
Q ss_pred HHhhhcccCCCC
Q 013453 431 FKAAGPAGGGAL 442 (442)
Q Consensus 431 g~~~gp~i~G~l 442 (442)
|.++||.+.|++
T Consensus 162 G~~~gp~i~g~l 173 (500)
T PRK09584 162 GSFFSMLATPWL 173 (500)
T ss_pred HHHHHHHHHHHH
Confidence 999999988753
No 225
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.75 E-value=1.7e-07 Score=86.83 Aligned_cols=144 Identities=14% Similarity=0.074 Sum_probs=99.1
Q ss_pred hHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHHH
Q 013453 284 LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVL 363 (442)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (442)
++...+..++.......+..+.|.++. +++|+|+.+.+++.+...++..++.+ ..+++.||+|||+.+..+.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~s~~~~~~~~~~~~~~~~~~~~-~~g~l~dr~g~r~~~~~~~~~ 76 (366)
T TIGR00886 3 LFFSWFGFFLSFSVWFAFSPLAVQMIK-----DDLGLSTAQLGNLVAVPVLAGAVLRI-ILGFLVDKFGPRYTTTLSLLL 76 (366)
T ss_pred hHHHHHHHHHHHHHHHHhHHhhhHHHH-----HHhCCCHHHhhHhhHHHHHHHHHHHH-HHHHHHHHhCchHHHHHHHHH
Confidence 455555555555555555555553332 44899999999999999999999998 677777888999999998888
Q ss_pred HHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhcccC
Q 013453 364 TIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGG 439 (442)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i~ 439 (442)
..++..+..+... ..+. +.+..++.+... +..+....++.+..|+++|+++.++.....++|..+++.+.
T Consensus 77 ~~i~~~~~~~~~~----~~~~-~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~ 146 (366)
T TIGR00886 77 LAIPCLWAGLAVQ----SYSV-LLLLRLFIGIAG-GSFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVM 146 (366)
T ss_pred HHHHHHHHHHHhh----hHHH-HHHHHHHHHHhc-hhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHH
Confidence 8888776655431 1121 222223333332 33445667888899999999999999877777777766554
No 226
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.75 E-value=1.9e-07 Score=86.04 Aligned_cols=149 Identities=12% Similarity=0.207 Sum_probs=113.8
Q ss_pred hhHHHHHHHHHHhHhcchhhchhHHHHHHH-hcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHH
Q 013453 41 TELFSIWIIVLCTALPISSLFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (442)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~ 119 (442)
+.+..+++..++.....+........+.+. +|.++.+ ..+.......+..++.+++.++++|+|+|+++.++.
T Consensus 236 rp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~------~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~ 309 (467)
T COG2211 236 RPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELF------AYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGL 309 (467)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHH------HHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHH
Confidence 344455555666666666666655555432 3444444 677777888888888999999999999999999999
Q ss_pred HHHHHHHHHHhccc--hHHHHHHHHHHHHhhcchhhHH-HHHhhhhcc-------ccchhhhhhhhhHhhhhHHHHHHHh
Q 013453 120 ASVVIFNTLFGLSV--NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR-------EEHQALGLSTVSTAWGIGLIIGPAL 189 (442)
Q Consensus 120 ~~~~i~~~~~~~a~--~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~~~ 189 (442)
++..++.++..+.+ +.+.+++..++.+++.+...+. .++++|..+ ++.-|...+......=+|.+++..+
T Consensus 310 ~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~ 389 (467)
T COG2211 310 LLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFI 389 (467)
T ss_pred HHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999888865 7888889999999998888774 777777654 2334667778888888999999988
Q ss_pred hhhhcc
Q 013453 190 GGFLAQ 195 (442)
Q Consensus 190 ~~~l~~ 195 (442)
.++...
T Consensus 390 ~g~~L~ 395 (467)
T COG2211 390 PGWILG 395 (467)
T ss_pred HHHHHH
Confidence 888887
No 227
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.75 E-value=4.2e-07 Score=85.13 Aligned_cols=125 Identities=14% Similarity=0.065 Sum_probs=92.8
Q ss_pred HHHHHH-HhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHH-HHHHHHHHHhc--cchHHHHH
Q 013453 64 LYFMIK-DFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA-SVVIFNTLFGL--SVNFWMAV 139 (442)
Q Consensus 64 ~~~~~~-~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~-~~~i~~~~~~~--a~~~~~l~ 139 (442)
.+.+.+ .+|.+..+ .+++.....++..++.++.+++.||++++........ ...+....... ..+.+.+.
T Consensus 230 ~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (394)
T PRK11652 230 SGVLMGAVLGLSSMT------VSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLL 303 (394)
T ss_pred ChHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHH
Confidence 344444 48888888 8999999999999999999999999984333222222 22222222222 34567778
Q ss_pred HHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhcc
Q 013453 140 LTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 140 ~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (442)
+..++.|++.+...| ..++..|..| ++++...++.+....+|..+++.+++.+.+
T Consensus 304 ~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~ 359 (394)
T PRK11652 304 VPAALFFFGAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQ 359 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 888999999888888 4888888886 578999999999999999999999988865
No 228
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.74 E-value=4.2e-08 Score=89.90 Aligned_cols=143 Identities=22% Similarity=0.339 Sum_probs=123.4
Q ss_pred HHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHH
Q 013453 47 WIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFN 126 (442)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~ 126 (442)
.+...+.+.+...+...+--..||++..+.- .|.....-..+-.+.-++.+++.+|+|+-+++..++.+..+=.
T Consensus 377 f~~av~mG~g~~lv~tFLfWHled~~~~~~L------fGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf 450 (618)
T KOG3762|consen 377 FFVAVVMGAGVGLVFTFLFWHLEDLGGIKTL------FGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRF 450 (618)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCccee------eeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHH
Confidence 3444455555566666666778899877777 7888888888888999999999999999999999999999999
Q ss_pred HHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhh-hHhhhhHHHHHHHhhhhhcc
Q 013453 127 TLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTV-STAWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 127 ~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~-~~~~~~g~~~g~~~~~~l~~ 195 (442)
+.....+|.|+.+..-+++|+..+..+. +.+|+++..||+-|..+.++. ....++|--+|.++||.+.+
T Consensus 451 ~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~ 521 (618)
T KOG3762|consen 451 LYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVE 521 (618)
T ss_pred HHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhhe
Confidence 9999999999999999999999888887 599999999999999999966 55678999999999999998
No 229
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.70 E-value=5.3e-07 Score=84.55 Aligned_cols=147 Identities=5% Similarity=-0.110 Sum_probs=103.8
Q ss_pred hHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHHH
Q 013453 284 LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVL 363 (442)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (442)
+......++++.+.........|.+ ++++|.+..+.|.+.+...++..++++ ..+++.||+|||+.+..+..+
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~------~~~~~~s~~~~g~l~s~~~~g~~i~~~-~~g~l~~r~G~r~~~~~g~~l 77 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQF------QQAFTLTAFQAALVQSAFYGGYFIMAI-PAAIFMKKLSYKAGILLGLFL 77 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHH------HHHhCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCchHHHHHHHHH
Confidence 3444445555554443333444433 345799999999999999999999998 677788888999999999988
Q ss_pred HHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhcccCC
Q 013453 364 TIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGG 440 (442)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i~G 440 (442)
..++..+.......+ ..+ ......++.+.+.....+....++.+..|++++++..++.+...++|..++|.+.+
T Consensus 78 ~~~g~~l~~~~~~~~--~~~-~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~ 151 (410)
T TIGR00885 78 YALGAFLFWPAAEIM--NYT-LFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQ 151 (410)
T ss_pred HHHHHHHHHHHHhhc--cHH-HHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888876654332211 122 23333344444445556666777778889999999999999999999999988754
No 230
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.70 E-value=1.2e-06 Score=76.93 Aligned_cols=147 Identities=17% Similarity=0.125 Sum_probs=117.3
Q ss_pred HHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcc-cCCchhhHHHHHH
Q 013453 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPVIIMGTAS 121 (442)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~~~~~~~~ 121 (442)
-+.+.+-.-+..+..++....+|.+..|-|.|..+ .|++.+...+.+...++....+.+| -++|+..+....+
T Consensus 210 aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~------aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~ 283 (395)
T COG2807 210 AWQVTLFMGLQSLLYYIVIGWLPAILIDRGLSAAE------AGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLL 283 (395)
T ss_pred hHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHH------hhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Confidence 34444444556667778888999999999999999 9999999999999999999999996 4688888888888
Q ss_pred HHHHHHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhcccc-chhhhhhhhhHhhhhHHHHHHHhhhhhccc
Q 013453 122 VVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREE-HQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (442)
Q Consensus 122 ~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~-~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 196 (442)
+.++.+.+.+.+.-..+.- -++.|+|.|...| +..++.+..+.. +-++-.++.+....+=..+||.+.|++-|.
T Consensus 284 ~l~G~~G~~~~P~~~~~lw-~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa 359 (395)
T COG2807 284 MLVGLVGLLLAPGQLPILW-ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDA 359 (395)
T ss_pred HHHHHHHHHHhhhhHHHHH-HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHh
Confidence 8888888888765443333 4899999888888 688888777644 445555677777777778899999999984
No 231
>PRK11462 putative transporter; Provisional
Probab=98.70 E-value=3.7e-07 Score=86.98 Aligned_cols=112 Identities=14% Similarity=0.185 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhccc--hHHHHHHHHHHHHhhcchhhHH-HHHhh
Q 013453 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSV--NFWMAVLTRFLLGSLNGLLGPI-KAYAC 160 (442)
Q Consensus 84 ~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a~--~~~~l~~~r~l~G~~~g~~~~~-~~~i~ 160 (442)
.+.+...+.++..++.+++++++||+|+|+++..+..+..+..++..+.+ +...+++.-++.|++.+...+. .++++
T Consensus 265 ~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~a 344 (460)
T PRK11462 265 FVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMS 344 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56777888899999999999999999999988765554444333333322 2334445556678776666663 67777
Q ss_pred hhcc-------ccchhhhhhhhhHhhhhHHHHHHHhhhhhcc
Q 013453 161 EIFR-------EEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 161 ~~~~-------~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (442)
|..+ +++.|..++......-+|..+++.+++.+.+
T Consensus 345 d~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~ 386 (460)
T PRK11462 345 DTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLA 386 (460)
T ss_pred HhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7665 3334555677778889999999999999887
No 232
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.68 E-value=1.6e-07 Score=88.26 Aligned_cols=174 Identities=13% Similarity=0.220 Sum_probs=118.6
Q ss_pred HHHHHHHHHHhHhcchhhchhHHHHHHH-hcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCc--------h
Q 013453 43 LFSIWIIVLCTALPISSLFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRK--------P 113 (442)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr--------~ 113 (442)
++.+++..+....+...+...+|.+.+| +|.+..+ .|++.++..+...+..+++|.++||.-+| |
T Consensus 260 vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~------~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rk 333 (466)
T KOG2532|consen 260 VWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRE------TGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRK 333 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhh------hhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHH
Confidence 5567788888888888888889988765 7999999 99999999999999999999999987552 2
Q ss_pred h-hHHHHHHHHHHHHHHhccchHHH-HHHHHHHHHhh-cchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHh
Q 013453 114 V-IIMGTASVVIFNTLFGLSVNFWM-AVLTRFLLGSL-NGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPAL 189 (442)
Q Consensus 114 ~-~~~~~~~~~i~~~~~~~a~~~~~-l~~~r~l~G~~-~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 189 (442)
. -.++....++..+..++.++-.. ..+.-+..+.+ .|...+ ...-..|. .+++-+..+++.+....+...++|.+
T Consensus 334 ifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~-apq~a~~l~g~~~~~~~~~~~~~P~~ 412 (466)
T KOG2532|consen 334 IFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQDI-APQHAGFVMGIINFVGALAGFIAPLL 412 (466)
T ss_pred HHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhhhc-cchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2 23445555555566666553111 11122222222 222222 12222332 45778999999999999999999999
Q ss_pred hhhhccccccCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhc
Q 013453 190 GGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWL 236 (442)
Q Consensus 190 ~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (442)
.+.+.+ .+ + +..|+.+|.+.+++.++..+.+.+.
T Consensus 413 vg~~~~-~~---t---------~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 413 VGIIVT-DN---T---------REEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred eeeEeC-CC---C---------HHHHHHHHHHHHHHHHHhchheeEe
Confidence 999995 11 1 4456777788887777665444333
No 233
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.68 E-value=7.6e-08 Score=85.04 Aligned_cols=160 Identities=18% Similarity=0.190 Sum_probs=119.7
Q ss_pred HhHhcchhhchhHHHH-HHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccC--CchhhHHHHHHHHHHHHH
Q 013453 52 CTALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG--RKPVIIMGTASVVIFNTL 128 (442)
Q Consensus 52 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~G--rr~~~~~~~~~~~i~~~~ 128 (442)
.........-|.++.+ .|++..+.-+ .|...--..+.+.++..+.|.++||++ |-..-..+++..++....
T Consensus 281 ~~n~~lafLePtlslwm~e~m~~p~w~------~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~ 354 (464)
T KOG3764|consen 281 FSNSSLAFLEPTLSLWMLETMFTPGWE------VGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGP 354 (464)
T ss_pred hccchHHHhCcccHHHHHHhccCCCcc------eeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhch
Confidence 3444555666777764 4666744446 888888888999999999999999999 544445667777777778
Q ss_pred HhccchHHHHHHHHHHHHhhcchhhHH-HH---Hhhhhcccc---chhhhhhhhhHhhhhHHHHHHHhhhhhccccccCC
Q 013453 129 FGLSVNFWMAVLTRFLLGSLNGLLGPI-KA---YACEIFREE---HQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYP 201 (442)
Q Consensus 129 ~~~a~~~~~l~~~r~l~G~~~g~~~~~-~~---~i~~~~~~~---~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~ 201 (442)
..+++++.++.+-++..|++.+....+ .. ++.|.-..+ .-|...++...++++|..+||.++|.+.+
T Consensus 355 iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~------ 428 (464)
T KOG3764|consen 355 IPFATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVE------ 428 (464)
T ss_pred hHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchhee------
Confidence 889999999999998888876665442 33 444433333 45788899999999999999999999998
Q ss_pred CcccccccccCCcChhHHHHHHHHHHHHHHHH
Q 013453 202 NLFSSESLFGKFPYFLPCLCISLFAFGVTIAA 233 (442)
Q Consensus 202 ~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (442)
+++|++...+.++..++..-+.
T Consensus 429 ----------~iGF~wl~~iig~~n~iyapvl 450 (464)
T KOG3764|consen 429 ----------AIGFEWLMTIIGILNLIYAPVL 450 (464)
T ss_pred ----------ehhHHHHHHHHHHHHHHHHHHH
Confidence 6677776677777776654333
No 234
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.67 E-value=2.9e-08 Score=89.29 Aligned_cols=191 Identities=15% Similarity=0.069 Sum_probs=132.2
Q ss_pred hhHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhh--hhHHHHHHHHH-HHHHHhhhhhhhhhhcccCCchhhHH
Q 013453 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDI--GSYAGYVGSSF-MFGRALTSVFWGLVADRYGRKPVIIM 117 (442)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~s~~-~~~~~~~~~~~G~l~dr~Grr~~~~~ 117 (442)
++++..+..+|+.-+..+..+.....+.+..+..+.+.+. .........+. ..++..+-.+...+.|++|||+..+.
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~ 383 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLM 383 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHh
Confidence 3444556677777777777777788888888877665322 11122222222 23344477788899999999999999
Q ss_pred HHHHHHHHHHHHhccch-H---HHHHHHHHHHHhhcchhhH---HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhh
Q 013453 118 GTASVVIFNTLFGLSVN-F---WMAVLTRFLLGSLNGLLGP---IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG 190 (442)
Q Consensus 118 ~~~~~~i~~~~~~~a~~-~---~~l~~~r~l~G~~~g~~~~---~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 190 (442)
+.+++.+..+..+...| . ..+++...+..+ .+.+.| ...+-+|.+|.+-|+..-|+..+..-+|+++|...-
T Consensus 384 GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~f-f~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F 462 (538)
T KOG0252|consen 384 GFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFF-FGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGF 462 (538)
T ss_pred hHHHHHHHHHHHcCCcccccccCceeehHHHHHH-HHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHh
Confidence 99999999999998776 2 222222223332 223333 345668999999999999999999999999999888
Q ss_pred hhhccccccCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhccccCCCC
Q 013453 191 GFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRH 243 (442)
Q Consensus 191 ~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 243 (442)
.++.+.. ++. ..+.+..+++.+.+.++..+..+++||+..+.
T Consensus 463 ~~~t~~~--yp~---------~~g~~~v~~i~~~~~~~gi~~T~l~pEtk~~~ 504 (538)
T KOG0252|consen 463 LYLTDHN--YPP---------NIGVRNVFIILAGCMLLGILFTLLIPETKGKS 504 (538)
T ss_pred hHhhhcc--CCc---------cccchHHHHHHHHHHHHhHheeEEeecccccC
Confidence 8887633 222 33455666888888888888888899887654
No 235
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.66 E-value=8.6e-07 Score=81.57 Aligned_cols=153 Identities=15% Similarity=0.176 Sum_probs=99.9
Q ss_pred cccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHH
Q 013453 277 SLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMV 356 (442)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (442)
+++.++..........+.........+++ .| +.++++-.+...|........+.++.-+ ...++.++.|+.++
T Consensus 366 ~~~~s~~~llff~~av~mG~g~~lv~tFL-fW-----Hled~~~~~~LfGv~~a~~~~gEI~~~f-fs~klI~kiGHv~v 438 (618)
T KOG3762|consen 366 KVFASPHILLFFFVAVVMGAGVGLVFTFL-FW-----HLEDLGGIKTLFGVVSALCHAGEILFYF-FSFKLIEKIGHVNV 438 (618)
T ss_pred HHhcCCCEEehhHHHHHHHHHHHHHHHHH-HH-----HHhhcCCcceeeeehhhhhccchHHHHH-HHHHHHHHhcccce
Confidence 45566665444333333333322222222 22 2344565666667666665666666655 66677788899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHH-HHHHhhh
Q 013453 357 ARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGM-SLFKAAG 435 (442)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~-~~g~~~g 435 (442)
+.+++.....=++.+.+..+ .| .++..-++.+.....++....++++...||+.+.++.|+..... .+|...|
T Consensus 439 ~~lgLa~~~~Rf~~~S~L~n-----~W-~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~G 512 (618)
T KOG3762|consen 439 MYLGLACNVGRFLYYSYLQN-----PW-MVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLG 512 (618)
T ss_pred eeehhhHHHHHHHHHHHhcC-----ch-heeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchh
Confidence 98888887777777666532 22 24444555556667788888899999999999999999986654 5788888
Q ss_pred cccCCCC
Q 013453 436 PAGGGAL 442 (442)
Q Consensus 436 p~i~G~l 442 (442)
++|+|.+
T Consensus 513 slIGG~~ 519 (618)
T KOG3762|consen 513 SLIGGFV 519 (618)
T ss_pred hhhhhhh
Confidence 8888753
No 236
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.66 E-value=7.7e-08 Score=65.94 Aligned_cols=80 Identities=16% Similarity=0.278 Sum_probs=74.0
Q ss_pred hHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhcc
Q 013453 53 TALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS 132 (442)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a 132 (442)
.++++..+.|.+|.+++|.++|.++ .|++.+...+||.+|.+...++.++..+++.+..+.+...+..+.+++.
T Consensus 4 mGigRFayTplLP~M~~~~~ls~~~------ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~ 77 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGLSLSQ------AGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALT 77 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567788899999999999999999 9999999999999999999999999888999999999999999999998
Q ss_pred chHHHH
Q 013453 133 VNFWMA 138 (442)
Q Consensus 133 ~~~~~l 138 (442)
++++..
T Consensus 78 ~~~~~w 83 (85)
T PF06779_consen 78 HSFWLW 83 (85)
T ss_pred hchHHH
Confidence 887654
No 237
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.65 E-value=5.2e-07 Score=80.26 Aligned_cols=147 Identities=16% Similarity=0.132 Sum_probs=119.9
Q ss_pred hhhHHHHHHHHHHhHhcchhhchhHHHHHHH-hcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHH
Q 013453 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (442)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~ 118 (442)
.+++..-.++.|+...........++.+.+| .|.++.+ .....+.+..+..+|.+..-++..|+...|.+.+.
T Consensus 235 ~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~------aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~ 308 (422)
T COG0738 235 NKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQ------AAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFY 308 (422)
T ss_pred ChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence 3445556666777777777788888888888 7778888 89999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhcc
Q 013453 119 TASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 119 ~~~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (442)
.++..+-++..+++++...++.. ++.|+..+..+| +.+...+..| +-....+..-.+..+|.++.|.+.|++.|
T Consensus 309 a~~~ill~~~~~l~~g~v~~~~l-~~ig~F~simfPTIfslal~~l~--~~ts~~s~~l~maivGGAiiP~l~G~i~d 383 (422)
T COG0738 309 ALIAILLLLAVALIGGVVALYAL-FLIGLFNSIMFPTIFSLALKNLG--EHTSVGSGLLVMAIVGGAIIPPLQGVIAD 383 (422)
T ss_pred HHHHHHHHHHHHHhcChHHHHHH-HHHHHHhHHHHHHHHHHHHhccC--ccccccceeeeeheecchHHHHHHHHHHH
Confidence 99888888889999986655544 788888899888 5888888888 33344455556667899999999999998
No 238
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.62 E-value=4.1e-07 Score=87.06 Aligned_cols=149 Identities=7% Similarity=-0.051 Sum_probs=106.8
Q ss_pred chhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHh-hchhHHHHHH
Q 013453 282 WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI-LGPIMVARIA 360 (442)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 360 (442)
+.++......+.-.+.+++...+++.|+.. ++|++..+++.+.........+..+ .++++.|| +|||+.+..+
T Consensus 14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~-----~lg~~~~~a~~i~~~~~~~~~~~~~-~~G~laDr~~G~r~~~~~g 87 (489)
T PRK10207 14 RPFFMIFFVELWERFGYYGVQGILAVFFVK-----QLGFSQEQAFITFGAFAALVYGLIS-IGGYVGDHLLGTKRTIVLG 87 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HcCCCHHHHHHHHHHHHHHHHHHHh-hHHHhhhhccchHHHHHHH
Confidence 346666666666777777777888887764 3788998888888777766666666 77888887 9999999999
Q ss_pred HHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChh--hhhHHHHHHHHHHHHHHhhhccc
Q 013453 361 GVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQD--QRGAANGIAMTGMSLFKAAGPAG 438 (442)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~~g~~~gp~i 438 (442)
.++..++.....+..... . .+.+.....+.+.....+...+++.|.+|++ +|+++.++.....++|.++||.+
T Consensus 88 ~~~~~~g~~~~~~~~~~~----~-ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l 162 (489)
T PRK10207 88 AIVLAIGYFMTGMSLLKP----D-LIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSL 162 (489)
T ss_pred HHHHHHHHHHHHHhccch----h-HHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHH
Confidence 999888877666542111 1 1112222223344445567788899999877 45889999999999999999988
Q ss_pred CCC
Q 013453 439 GGA 441 (442)
Q Consensus 439 ~G~ 441 (442)
+|+
T Consensus 163 ~g~ 165 (489)
T PRK10207 163 APV 165 (489)
T ss_pred HHH
Confidence 775
No 239
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.60 E-value=2e-06 Score=77.26 Aligned_cols=172 Identities=17% Similarity=0.144 Sum_probs=131.1
Q ss_pred HHhHhcchhhchhHH-HHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhc-ccCCchhhHHHHHHHHHHHHH
Q 013453 51 LCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD-RYGRKPVIIMGTASVVIFNTL 128 (442)
Q Consensus 51 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~d-r~Grr~~~~~~~~~~~i~~~~ 128 (442)
++..++.++.-.++. .=.+-||.+..| ..-++.....|..++....|++.. |.++|+.-.+++....++..+
T Consensus 218 ~l~t~a~~~QD~iLEPygg~Vfgmsv~e------TT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~l 291 (403)
T PF03209_consen 218 FLGTLAFFMQDVILEPYGGEVFGMSVGE------TTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFAL 291 (403)
T ss_pred HHHHHHHHhhHHHcCCchhHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHH
Confidence 334444455556663 335679999999 899999999999999999999888 677888888888877777655
Q ss_pred H---hccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCcc
Q 013453 129 F---GLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLF 204 (442)
Q Consensus 129 ~---~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~ 204 (442)
. +...+.+.+...-++.|++.|.+.. +.+...|...+++.|..+|.+.....++..+|..+++.+.|........
T Consensus 292 ii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~- 370 (403)
T PF03209_consen 292 IILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGN- 370 (403)
T ss_pred HHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-
Confidence 4 3456788999999999999999998 5899999999999999999999999999999999999998743221100
Q ss_pred cccccccCCcChhHHHHHHHHHHHHHHHHh
Q 013453 205 SSESLFGKFPYFLPCLCISLFAFGVTIAAF 234 (442)
Q Consensus 205 gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (442)
+ - ..+|-.+|.+-++..++.+....
T Consensus 371 --~--~-~~aY~~VF~lEa~ll~~a~~ll~ 395 (403)
T PF03209_consen 371 --S--P-ALAYGVVFALEAVLLLAALVLLG 395 (403)
T ss_pred --C--c-chHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 34566666776666665554443
No 240
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.56 E-value=6.4e-10 Score=106.18 Aligned_cols=163 Identities=20% Similarity=0.279 Sum_probs=102.6
Q ss_pred cchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHh--c--
Q 013453 56 PISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFG--L-- 131 (442)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~--~-- 131 (442)
+........+.+.++.+.++.. . ...+ ..+...++.++...+.||+|||++++.+..+.+++.+..+ .
T Consensus 268 g~~~~~~~~~~i~~~~~~~~~~-~----~~~~---~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~ 339 (451)
T PF00083_consen 268 GINFIFYYSPSIFENAGISNSF-L----ATLI---LGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFL 339 (451)
T ss_pred cccccccccccccccccccccc-c----cccc---ccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3344445557777777777652 0 2322 2244456666777999999999999999988888887764 1
Q ss_pred -cch-----HHHHHHHHHHHHhh-cchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCc
Q 013453 132 -SVN-----FWMAVLTRFLLGSL-NGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNL 203 (442)
Q Consensus 132 -a~~-----~~~l~~~r~l~G~~-~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~ 203 (442)
.++ ...+... .+...+ .....+ ...+..|.+|.+.|+++.++......++..+++.+...+.+.
T Consensus 340 ~~~~~~~~~~~~i~~~-~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~------- 411 (451)
T PF00083_consen 340 GVSSSSWWSILSIVFL-ALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNN------- 411 (451)
T ss_pred ccccccccccccceee-eecccccccccccccccccccccccccccccccccccccccccccccccccccccc-------
Confidence 111 1222222 222222 212334 468889999999999999999999999999888887777751
Q ss_pred ccccccccCCcChhHHHHHHHHHHHHHHHHhhccccCCC
Q 013453 204 FSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHR 242 (442)
Q Consensus 204 ~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 242 (442)
.+ .+.......+...+...+..+++||++..
T Consensus 412 ~~--------~~~~~~i~~~~~~i~~i~~~~~lpET~g~ 442 (451)
T PF00083_consen 412 LG--------GWGVFLIFAGVCLIAIIFVYFFLPETKGK 442 (451)
T ss_pred cc--------ccccchhhHHHHHHHHhheeEEEeeCCCC
Confidence 11 01111233333444445667889998754
No 241
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.55 E-value=4.3e-06 Score=77.19 Aligned_cols=118 Identities=12% Similarity=0.030 Sum_probs=97.0
Q ss_pred CcccCChhH-HHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHH
Q 013453 316 GGLNYSTQM-VGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKN 394 (442)
Q Consensus 316 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (442)
+++|++..+ .|.+...+..+..+..+ .++++.||+|.|+++..+.+.-.+...+.++... ...+.+.-++.|
T Consensus 54 ~elglT~~qv~G~I~s~F~ysYal~qI-p~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~S------l~~L~i~R~llG 126 (511)
T TIGR00806 54 TVLNFTEETVTNEIIPVLPYSHLAVLV-PVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTS------VWHMQLMEVFYS 126 (511)
T ss_pred HHcCCCHHHhcchHHHHHHHHHHHHHH-HHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHH
Confidence 458999999 99999999999999988 8888889999999999999888888888777532 223444445555
Q ss_pred HHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhcccCCC
Q 013453 395 LLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGA 441 (442)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i~G~ 441 (442)
.+..... ....++.+.+|+++|+++.|+.+....+|.+++++++++
T Consensus 127 vaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql 172 (511)
T TIGR00806 127 VTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL 172 (511)
T ss_pred HHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555555 788888889999999999999999999999999987653
No 242
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.50 E-value=2.6e-05 Score=71.62 Aligned_cols=370 Identities=13% Similarity=0.083 Sum_probs=183.9
Q ss_pred HHHHHHHHHhHhcchhhchhHHHHHHH--hcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhc-----ccCCchhhH
Q 013453 44 FSIWIIVLCTALPISSLFPFLYFMIKD--FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD-----RYGRKPVII 116 (442)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~d-----r~Grr~~~~ 116 (442)
..+.+..++++...+.....+|.+.++ -+.+.+| .+...-+ ...+ -.-++|.++.| |+||||..+
T Consensus 3 ~lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q------~~~fSla-~~Pf-SlKlLWaPiVDs~y~~~~GRRKSWi 74 (544)
T PF13000_consen 3 ALLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQ------QAIFSLA-SYPF-SLKLLWAPIVDSVYSKRIGRRKSWI 74 (544)
T ss_pred eHHHHHHHHcCcccccccccchhhhccccCCCChhH------heeeeee-echh-HHHHhhhhhhhhhcccccCCcchhh
Confidence 456667888888888777788999888 6777776 4432211 1111 12335555555 899999876
Q ss_pred HHH-HHHHHHHHHHhccc----------------------h--HHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhh
Q 013453 117 MGT-ASVVIFNTLFGLSV----------------------N--FWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQAL 170 (442)
Q Consensus 117 ~~~-~~~~i~~~~~~~a~----------------------~--~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~ 170 (442)
+-. .+.++..+..+... + ...+....++.=+-.+.... +-.+.-....+++++.
T Consensus 75 iP~Q~l~g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ 154 (544)
T PF13000_consen 75 IPIQYLSGILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGY 154 (544)
T ss_pred hHHHHHHHHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcch
Confidence 532 33333333222111 1 11222222233333344433 3455555567788888
Q ss_pred hhhhhhHhhhhHHHHHHHhhhhhccccc------cCCCcccccccccCCcChhHHHHHHHHH-HHHHHHHhhccccCCCC
Q 013453 171 GLSTVSTAWGIGLIIGPALGGFLAQPAE------KYPNLFSSESLFGKFPYFLPCLCISLFA-FGVTIAAFWLPETLHRH 243 (442)
Q Consensus 171 ~~~~~~~~~~~g~~~g~~~~~~l~~~~~------~~~~~~gw~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~e~~~~~ 243 (442)
+......+.++|..++..+--.+-+..- ..+.-.|.-.. .+| . .+-+... ++...+.++-+|.+..+
T Consensus 155 ASTcqtvG~~~Gyfls~tvFlalns~~f~Nky~r~~p~~~glvtl---~~y-l--~fwg~~~l~~T~~v~~~k~E~~~~~ 228 (544)
T PF13000_consen 155 ASTCQTVGQTAGYFLSFTVFLALNSPDFCNKYLRSTPSDEGLVTL---SGY-L--KFWGWVFLIVTILVAFFKKEKPHSE 228 (544)
T ss_pred HHHHHHhHhhhhHHHHHHHHHhhCCHHHHHHhcccCCCCCCeeeH---HHH-H--HHHHHHHHHHHHHHheEeecccccc
Confidence 8877777777777776655444332100 00111111000 011 1 1122222 22333444455654322
Q ss_pred CCCC-cc---chhhhhhh--hhhhhh--hhhhh---cccccccccccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCC
Q 013453 244 NDDD-DS---CDVSYDAL--ESASAE--VKEEE---GREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSP 312 (442)
Q Consensus 244 ~~~~-~~---~~~~~~~~--~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (442)
...+ +. .+...++. +.++++ .+++. ++.-+...+++|-|++..+.+.....-..+..-.....+=+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Y~~l~~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLl-- 306 (544)
T PF13000_consen 229 SLPKIEPINKSDGKSKEISIEYDESDVISTEEILSIKDVYKSLWKILKLPNVQTLIIILLTAKIGFQANDAVTSLKLL-- 306 (544)
T ss_pred cCccccccccccccccccceecccccccchhhhhhHHHHHHHHHHHHcCchHHHHHHHHHHHHhccccchhhhHHHHH--
Confidence 1111 00 00000000 000000 00000 111123455677888887777777666665555544444333
Q ss_pred cccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhch--------------------------hHHHHHHHHHHHH
Q 013453 313 KKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGP--------------------------IMVARIAGVLTIP 366 (442)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~ 366 (442)
+.|++-++.+.+..+..=..++....++++...+... .+....++..-.+
T Consensus 307 ----EkG~~KE~LAl~~li~~P~qii~~~~~~Kws~g~~P~~~~~~~l~~~~~~~~~~~~l~g~~g~L~~Wl~af~gRL~ 382 (544)
T PF13000_consen 307 ----EKGLSKEDLALLVLIDFPFQIILPYYIGKWSAGSPPLDVDNKALPNFSRANKIIRLLVGDAGALRPWLWAFWGRLV 382 (544)
T ss_pred ----HcCCCHHHhHHHHHHhhhHHHHHHHHhhhhhcCCCccccccccccccccccchhhhhhccchhhHHHHHHHHHHHH
Confidence 2588888877776665556666666566665543210 0111112111111
Q ss_pred HHHHH----HHHHHhh--chhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHh
Q 013453 367 LLTSY----PYIAMLS--GFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKA 433 (442)
Q Consensus 367 ~~~~~----~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ 433 (442)
..++. ...+... +...+..++...++..+.....+....+.-+++.+|..=|+.+.+.|++.++|+-
T Consensus 383 ~a~l~~~iV~~fP~~g~v~~~Yf~lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGt 455 (544)
T PF13000_consen 383 AALLAQLIVYFFPSDGPVPTYYFLLVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGT 455 (544)
T ss_pred HHHHHHheEEeCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCC
Confidence 11111 0111001 1224444555556666666677777888888999999999999999999999874
No 243
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.50 E-value=2.6e-06 Score=66.88 Aligned_cols=107 Identities=21% Similarity=0.191 Sum_probs=90.3
Q ss_pred HHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhcchhhHH-HHHhhhhcccc
Q 013453 88 GSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREE 166 (442)
Q Consensus 88 ~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~ 166 (442)
.++......+.+++.+.+.+++|.|+.++++.+.+.+-.... +-++.+.++.+-++.|++.+..+++ ..++.+..+++
T Consensus 43 lai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~ 121 (156)
T PF05978_consen 43 LAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTEE 121 (156)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHH
Confidence 355566677888889999999999999999999988655544 4567888999999999999999996 78999999999
Q ss_pred chhhhhhhhhHhhhhHHHHHHHhhhhhcc
Q 013453 167 HQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 167 ~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (442)
+|++..+++-.....+.++|.++.-.+.+
T Consensus 122 ~~~~~~~ifw~i~~~s~i~G~~~~~~~~~ 150 (156)
T PF05978_consen 122 TIGRNTGIFWAIFQSSLIFGNLFLFFIFQ 150 (156)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999988888888888887766543
No 244
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.50 E-value=3.2e-06 Score=79.59 Aligned_cols=147 Identities=9% Similarity=-0.005 Sum_probs=92.1
Q ss_pred hHHHHHHHHHHhHhcchhhchhHHHHHHH-hcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHH
Q 013453 42 ELFSIWIIVLCTALPISSLFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (442)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~ 120 (442)
.++...+..++............|.+.++ +|.+..+ .++.......+..++..+.+++.+|..+++.......
T Consensus 219 ~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~------~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~ 292 (413)
T PRK15403 219 LFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQ------FAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVP 292 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHH
Confidence 34433333333333334444455766554 5899888 8998888888888888888887655555444332222
Q ss_pred HHHHHHHHHh-----ccchHHHHHHHHHHHHhhcchhhHH-HHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhc
Q 013453 121 SVVIFNTLFG-----LSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (442)
Q Consensus 121 ~~~i~~~~~~-----~a~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 194 (442)
+..++.++.. ..++++..++..++.++|.+...|. .+ .+..-.+..+|++.++.+.....+...++..++++.
T Consensus 293 ~~~ig~~l~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~p~~~~-~al~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~ 371 (413)
T PRK15403 293 IQLVGLALLIVGNLLWPHVWLWSVLGTSLYAFGIGLIFPTLFR-FTLFSNNLPKGTVSASLNMVILMVMAVSVEIGRWLW 371 (413)
T ss_pred HHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHhHHHHH-HHhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222222222 2234444567888888888887774 43 222222335799999999988888999999999887
Q ss_pred c
Q 013453 195 Q 195 (442)
Q Consensus 195 ~ 195 (442)
+
T Consensus 372 ~ 372 (413)
T PRK15403 372 F 372 (413)
T ss_pred H
Confidence 5
No 245
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.49 E-value=4.7e-07 Score=61.78 Aligned_cols=71 Identities=23% Similarity=0.529 Sum_probs=61.8
Q ss_pred HHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHH
Q 013453 46 IWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (442)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~ 122 (442)
+-...++.....+...|.+|.+.++.|.+..+ +|.+.++..+...++.+++|.++||+++++..+....++
T Consensus 5 lk~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~------iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 5 LKAFYFFYFAALGCLYPFLPLYLKQLGLSPSQ------IGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhhhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 34456666777788899999999999999999 999999999999999999999999999998887765543
No 246
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.43 E-value=1.1e-05 Score=76.13 Aligned_cols=187 Identities=16% Similarity=0.050 Sum_probs=124.2
Q ss_pred hhHHHHHHHHHHhHhcchhhchhHHHHH-H-Hhcccccchh---hhh-HHHHHHHHHHHHHHhhhhhhhhhhcccCC-ch
Q 013453 41 TELFSIWIIVLCTALPISSLFPFLYFMI-K-DFQIAKREED---IGS-YAGYVGSSFMFGRALTSVFWGLVADRYGR-KP 113 (442)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~---~~~-~~g~~~s~~~~~~~~~~~~~G~l~dr~Gr-r~ 113 (442)
+.+..+++..++..++...+......+. + -|+.++.+.+ .+. .-.+....+.+...+.+++..++.+|+|+ |+
T Consensus 258 ~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~ 337 (477)
T TIGR01301 258 RPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKR 337 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchh
Confidence 3455677778887777666655554443 2 2444432211 110 12233444555555777888899999995 67
Q ss_pred hhHHHHHHHHHHHHHHhccch---------------------HHHHHHHHHHHHhhcchhhHH-HHHhhhhccc--cchh
Q 013453 114 VIIMGTASVVIFNTLFGLSVN---------------------FWMAVLTRFLLGSLNGLLGPI-KAYACEIFRE--EHQA 169 (442)
Q Consensus 114 ~~~~~~~~~~i~~~~~~~a~~---------------------~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~--~~r~ 169 (442)
+..++.++.+++.+...+.++ .+..++.-.+.|+..+..... ++++++..++ ++.|
T Consensus 338 ~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G 417 (477)
T TIGR01301 338 LWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQG 417 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCc
Confidence 778888888888777765432 366777888999988887775 8999999985 4559
Q ss_pred hhhhhhhHhhhhHHHHHHHhhhhhccccccCCCcccccccccCCcChhHHHHHHHHHHHH-HHHHhhccccCC
Q 013453 170 LGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLH 241 (442)
Q Consensus 170 ~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~ 241 (442)
..+|+++.+..+..++..+..|.+.+ .+|-+. ...+.+.++..+++ +...+.+|++++
T Consensus 418 ~~mgilN~~I~lpQii~sl~~g~~~~-------~~g~~~-------~~~~~~~gv~~~~aa~~~~~~~~~~~~ 476 (477)
T TIGR01301 418 LSMGVLNLAIVIPQIIVSLGSGPWDQ-------LFGGGN-------LPAFVVGAVAAFVSGLLALILLPRPRV 476 (477)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHH-------HcCCCC-------eeHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999988888665 233221 22335556665555 445666777653
No 247
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.37 E-value=1.3e-06 Score=68.30 Aligned_cols=103 Identities=17% Similarity=0.228 Sum_probs=73.9
Q ss_pred HHHHHHHHHhhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhccc
Q 013453 332 TGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRA 411 (442)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (442)
..++..++.+ ..+++.||.+||+....+.....+......... ..+. ........+.......+.......|.
T Consensus 7 ~~~~~~~~~~-~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~ 79 (141)
T TIGR00880 7 YALGQLIYSP-LSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSS-----NITV-LIIARFLQGFGAAFALVAGAALIADI 79 (141)
T ss_pred ehhHHHHHHh-hHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhc-----cHHH-HHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 4566677777 566677888999988887777776665554431 1222 22233344444455667788889999
Q ss_pred CChhhhhHHHHHHHHHHHHHHhhhcccCCC
Q 013453 412 VDQDQRGAANGIAMTGMSLFKAAGPAGGGA 441 (442)
Q Consensus 412 ~~~~~~g~~~g~~~~~~~~g~~~gp~i~G~ 441 (442)
.|+++|+++.++.+....+|..++|.+.|.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 109 (141)
T TIGR00880 80 YPPEERGVALGLMSAGIALGPLLGPPLGGV 109 (141)
T ss_pred CChhhhhHHHHHHHHhHHHHHHHhHHhHHH
Confidence 999999999999999999999999988774
No 248
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=98.31 E-value=0.00073 Score=65.40 Aligned_cols=140 Identities=13% Similarity=0.091 Sum_probs=104.7
Q ss_pred hhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcc-cCCchhhHHHHHHHHHHHHHHhccc---
Q 013453 58 SSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPVIIMGTASVVIFNTLFGLSV--- 133 (442)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~~~~~~~~~~i~~~~~~~a~--- 133 (442)
+.....+..+.++++.+... +.-..+.+.-......+.+++++|- +||-+++.++.++..++..+..++.
T Consensus 55 g~~~nlv~ylt~~~~~~~~~------aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~ 128 (571)
T KOG1237|consen 55 GLVSNLVTYLTLELHASGGG------AANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIP 128 (571)
T ss_pred cchhHHHHHHHHHhccchHH------HHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 33456667778899998877 7778888888888888999999997 5898999999888888765443311
Q ss_pred -------------------h---HHHHHHHHHHHHhhcchhhHH-HHHhhhhcc---ccc---hhhhhhhhhHhhhhHHH
Q 013453 134 -------------------N---FWMAVLTRFLLGSLNGLLGPI-KAYACEIFR---EEH---QALGLSTVSTAWGIGLI 184 (442)
Q Consensus 134 -------------------~---~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~---~~~---r~~~~~~~~~~~~~g~~ 184 (442)
+ ...++.+.-+..+|.|..-|+ .++-+|.++ +++ +...+.++....+.|..
T Consensus 129 ~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l 208 (571)
T KOG1237|consen 129 ALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGAL 208 (571)
T ss_pred hcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHH
Confidence 1 134566666777788888885 889999998 322 23667888999999999
Q ss_pred HHHHhhhhhccccccCCCcccccccc
Q 013453 185 IGPALGGFLAQPAEKYPNLFSSESLF 210 (442)
Q Consensus 185 ~g~~~~~~l~~~~~~~~~~~gw~~~~ 210 (442)
++..+--+.-+ ..||...+
T Consensus 209 ~a~t~~vyiq~-------~~~w~lgf 227 (571)
T KOG1237|consen 209 LAQTVLVYIQD-------NVGWKLGF 227 (571)
T ss_pred HHHHHHHhhhh-------cccceeec
Confidence 99888888766 56665544
No 249
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.28 E-value=2.7e-05 Score=75.52 Aligned_cols=179 Identities=15% Similarity=0.152 Sum_probs=109.5
Q ss_pred HHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHH
Q 013453 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (442)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~ 122 (442)
...+.+..|-...+.+......+.+.++.+.+.+. .+...+..+...++..+...+.||+|||+.++.+...+
T Consensus 297 ~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-------~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m 369 (513)
T KOG0254|consen 297 IIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-------FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGM 369 (513)
T ss_pred HHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-------HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHH
Confidence 33555666666677788888888888888877542 23334444555666667799999999999999999999
Q ss_pred HHHHHHHhccchH-----------HH--HHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHH
Q 013453 123 VIFNTLFGLSVNF-----------WM--AVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPA 188 (442)
Q Consensus 123 ~i~~~~~~~a~~~-----------~~--l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 188 (442)
.++.++.+..... .. +...-+..........+ ...+.+|.+|.+-|+++.++......+...+-..
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~ 449 (513)
T KOG0254|consen 370 SICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISF 449 (513)
T ss_pred HHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHH
Confidence 9999887753211 11 11112222222223334 3568899999999999988876666655544433
Q ss_pred hhhhhccccccCCCcccccccccCCcChhHHHHHHHHHHHHH-HHHhhccccCCCC
Q 013453 189 LGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRH 243 (442)
Q Consensus 189 ~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~ 243 (442)
....+.+ ..++.. ..+...++..+... ....++||++...
T Consensus 450 ~~~~~~~-------~~~~~~--------~f~~f~~~~~~~~~~fv~~~~pETkg~s 490 (513)
T KOG0254|consen 450 FFPFITE-------ALGIGG--------TFGYFGGICLLSLIIFVFFFVPETKGLT 490 (513)
T ss_pred HHHHHHH-------hccccc--------hHHHHHHHHHHHHHHHheEEcccCCCCc
Confidence 3333332 111111 11133444444444 5677889986543
No 250
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.27 E-value=1.2e-05 Score=70.09 Aligned_cols=317 Identities=14% Similarity=0.064 Sum_probs=169.9
Q ss_pred HHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhcchhhHHHHHhhhhccccchhhh
Q 013453 92 MFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALG 171 (442)
Q Consensus 92 ~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~ 171 (442)
.-.+.+.-.+.=.+.|..-.|++++.-.+...+...+.-+.++.+.+=+.-+..|...+.-..-++++=+..+++++.++
T Consensus 52 TYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tAaEIAYysYIYs~Vd~~~Yqrv 131 (433)
T KOG3810|consen 52 TYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATAAEIAYYSYIYSKVDPEMYKRV 131 (433)
T ss_pred hHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHHHHHhhhheeeeecCHHHHHHH
Confidence 34445555566678899989999998888888888889999999999999999888766655568899999999999999
Q ss_pred hhhhhHhhhhHHHHHHHhhhhhccccccCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhccccCCCCCCCCccch
Q 013453 172 LSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCD 251 (442)
Q Consensus 172 ~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 251 (442)
.+...++.-.|...|..++..+.... ...+...-.+......+......++|..++..-.++++.+
T Consensus 132 t~y~RaA~L~g~~~g~vlaQlLvs~~--------------~~sy~~LN~ISL~~~~ia~~~A~fLP~v~rSl~f~~~~~~ 197 (433)
T KOG3810|consen 132 TGYCRAAFLVGKFVGSVLAQLLVSLE--------------TLSYTTLNYISLAEVTIAVLLALFLPRVKRSLYFHRLEDK 197 (433)
T ss_pred HHHhHHHHHHHhHHHhHHHHHHhhhc--------------ccchhhhchhhHHHHHHHHHHHhhCCCCchhhhhhccccc
Confidence 99999999999999999999888622 2233333344433334445556677766533211111111
Q ss_pred hhhhhhhhhhhhh--hh----hhcccccccccccccchhHHHHHHHHHHHHHHhhHHHHHH-HHhcCCcccCcccCChhH
Q 013453 252 VSYDALESASAEV--KE----EEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFS-LWANSPKKLGGLNYSTQM 324 (442)
Q Consensus 252 ~~~~~~~~~~~~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 324 (442)
....+.++...+. .+ ....-.....+..+||.+..-.+...+..+.+....++.- +|-... -+-....
T Consensus 198 ~~v~~~e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~-----~~~~~vy 272 (433)
T KOG3810|consen 198 ISVGDLEEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVA-----PNPANVY 272 (433)
T ss_pred ceeccchhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhC-----CCchhhh
Confidence 1111111111100 00 0001112334445666654433333333332222222211 221110 0112223
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHhhchhH--HHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHH
Q 013453 325 VGEVLAITGFSLLVFQLSLYPFLERILGPIM--VARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIIT 402 (442)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (442)
.|..-++..+.+.++.+ ..+.+.-...|.. .+.++.+..+...+.+.. .+ ..|+ .....++....-....+
T Consensus 273 NG~veAv~tlLGa~~~~-~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~---t~--~Iw~-~Ya~yvlfr~~y~l~it 345 (433)
T KOG3810|consen 273 NGAVEAVSTLLGAIAAL-AAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQ---TQ--HIWV-CYAGYVLFRVIYQLTIT 345 (433)
T ss_pred cCHHHHHHHHHHHHHHH-HHHheeeccchhhHHHHHHHHHHhhhhhhhhhc---cc--ceeh-hhhhHHHHHhhHhhhhh
Confidence 44555555556666666 4444443333432 222332222222222211 11 2222 22222222222223334
Q ss_pred hhhhhhcccCChhhhhHHHHHHHHHHHHHHhh
Q 013453 403 GLFILQNRAVDQDQRGAANGIAMTGMSLFKAA 434 (442)
Q Consensus 403 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~ 434 (442)
.....+++....+.-|...|+..++.-+-..+
T Consensus 346 iA~~~iA~nL~~e~~gLvFGiNTFvAl~lQsi 377 (433)
T KOG3810|consen 346 IATFQIARNLSSELFGLVFGINTFVALILQSI 377 (433)
T ss_pred HHHHHHHHhhhhhhheeeeehHHHHHHHHHHh
Confidence 44455555677788899999988776655443
No 251
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.24 E-value=3.7e-06 Score=76.24 Aligned_cols=117 Identities=12% Similarity=0.046 Sum_probs=97.4
Q ss_pred cccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHH
Q 013453 317 GLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLL 396 (442)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (442)
.+|.+....|++.....+...+.++ +.+++.||++|++++.++..+-.++.++-.+. .+.+.+.+.=.+.+.+
T Consensus 62 ~fni~~s~~Gll~~vf~v~~~i~sP-l~gyLadryNR~~v~~vG~~iW~~Av~~~~fs------~~Fwq~~l~R~~vGiG 134 (493)
T KOG1330|consen 62 YFNISDSELGLLQTVFIVVFMIASP-LFGYLADRYNRKRVIAVGIFIWTLAVFASGFS------NHFWQVLLCRGFVGIG 134 (493)
T ss_pred hcCCCchhccchhHHHHHHHHHHHH-HHHHHHhhcCcceEEeeHHHHHHHHHHHHHHH------HHHHHHHHHHHHhccc
Confidence 4799999999999999999999999 88888999999999999888877777766654 2333344555566677
Q ss_pred HHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhcccCC
Q 013453 397 SVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGG 440 (442)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i~G 440 (442)
.....|..++++++.+|.++|+++.++.+....+|+.+|-..++
T Consensus 135 eAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs 178 (493)
T KOG1330|consen 135 EASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGS 178 (493)
T ss_pred hhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeee
Confidence 77888999999999999999999999999999999888866554
No 252
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.23 E-value=1.1e-06 Score=86.73 Aligned_cols=128 Identities=13% Similarity=0.019 Sum_probs=100.4
Q ss_pred cccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhhc-------------
Q 013453 313 KKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSG------------- 379 (442)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 379 (442)
...++++++..+.|++.+...++..++.+ ...++.+|.+|++.+.++.++.+++.++..+.+...+
T Consensus 58 ~iek~F~lss~~~G~i~s~~~i~~~~~~i-~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~ 136 (633)
T TIGR00805 58 TIERRFKLSTSSSGLINGSYEIGNLLLII-FVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGN 136 (633)
T ss_pred hhhhhhCCCCCcceeeeehhhHHHHHHHH-HHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCcccccccccccc
Confidence 34567999999999999999999999988 5556667779999999988888888777655431100
Q ss_pred --------------------------------hhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHH
Q 013453 380 --------------------------------FGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTG 427 (442)
Q Consensus 380 --------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 427 (442)
...+..+++.-++.+.+.....+...+++.|.+|+++|+...|+.+..
T Consensus 137 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~ 216 (633)
T TIGR00805 137 LSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESI 216 (633)
T ss_pred ccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHH
Confidence 012344555666666677777788899999999999999999999999
Q ss_pred HHHHHhhhcccCCC
Q 013453 428 MSLFKAAGPAGGGA 441 (442)
Q Consensus 428 ~~~g~~~gp~i~G~ 441 (442)
..+|.++|+.++|+
T Consensus 217 ~~iG~~lG~llgg~ 230 (633)
T TIGR00805 217 AVFGPAFGYLLGSF 230 (633)
T ss_pred HHhhhHHHHHHHHH
Confidence 99999999988765
No 253
>PTZ00207 hypothetical protein; Provisional
Probab=98.23 E-value=4e-05 Score=74.04 Aligned_cols=119 Identities=15% Similarity=0.049 Sum_probs=78.9
Q ss_pred ccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhh-chhhHHHHHHHHHH
Q 013453 314 KLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLS-GFGLAFLLNCASVV 392 (442)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 392 (442)
..+++|++..+.+.+..... ......+ ..+++.||+|+|+++.++.++..++.++..+..... ....+. +.+...+
T Consensus 53 L~~~lgls~~~l~~i~svg~-~~g~~~l-p~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~-l~l~r~l 129 (591)
T PTZ00207 53 MQARYNLTQRDLSTITTVGI-AVGYFLL-PYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVR-LSVYNGL 129 (591)
T ss_pred HHHHhCcCHHHHHHHHHHHH-HHHHHHH-HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHH-HHHHHHH
Confidence 34568999999998876633 3334444 568888999999999999999988887766642110 012222 2222233
Q ss_pred HHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhc
Q 013453 393 KNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGP 436 (442)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp 436 (442)
.+.+.....+.....+.+.+| ++||++.|+......+|+++.+
T Consensus 130 ~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~ 172 (591)
T PTZ00207 130 MTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILG 172 (591)
T ss_pred HHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHH
Confidence 333344444555555666776 7899999999999999997543
No 254
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.19 E-value=2.3e-05 Score=73.64 Aligned_cols=124 Identities=20% Similarity=0.281 Sum_probs=108.4
Q ss_pred HHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhh-hhhcccCCchhhHHHHHHHHHHHHHHhccchHHHHHHHHHH
Q 013453 66 FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWG-LVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFL 144 (442)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G-~l~dr~Grr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~r~l 144 (442)
.....++.++.+ .+.+.+...+...+++++.. .+...+|-|++...|+..-.+.....+++++.|+++...++
T Consensus 267 yl~~~f~w~~~~------~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~ 340 (463)
T KOG2816|consen 267 YLKAKFGWNKKE------FSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVV 340 (463)
T ss_pred EEeeecCcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHH
Confidence 345678999998 89888888888888888777 77778999999999999999999999999999999999988
Q ss_pred HHhhcchhhHHHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhcc
Q 013453 145 LGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 145 ~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (442)
.++.........+.++.+..++++|+++++......+...++|.+-+.+..
T Consensus 341 ~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 341 VALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred HHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 888655555469999999999999999999999999999999999888865
No 255
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.15 E-value=3.7e-05 Score=68.09 Aligned_cols=122 Identities=14% Similarity=0.055 Sum_probs=109.5
Q ss_pred HHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccC--CchhhHHHHHHHHHHHHHHhccchHHHHHHHHHHHH
Q 013453 69 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG--RKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLG 146 (442)
Q Consensus 69 ~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~G--rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~r~l~G 146 (442)
+.+|.++.| .|-+.+...+...+.+....+..||.. -|-.+..++.+..-..++.+.++....+..+-.+-.
T Consensus 290 ~rfg~ss~~------~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~s 363 (451)
T KOG2615|consen 290 GRFGYSSMQ------QGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKS 363 (451)
T ss_pred CccCCChhh------heeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHH
Confidence 678999988 899999999999999999999999988 788888888888888888888999999999999999
Q ss_pred hhcchhhHH-HHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccc
Q 013453 147 SLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (442)
Q Consensus 147 ~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 196 (442)
+..+...++ ..++....|.++||..+|+......++-++||+++|.+..+
T Consensus 364 f~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~W 414 (451)
T KOG2615|consen 364 FSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSW 414 (451)
T ss_pred HHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEE
Confidence 988888885 88999999999999999999999999999999999998763
No 256
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.09 E-value=0.0025 Score=60.48 Aligned_cols=293 Identities=13% Similarity=0.155 Sum_probs=147.4
Q ss_pred hhhHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHH-HHHhhhhhhhhhhcccCCchhhHHH
Q 013453 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMF-GRALTSVFWGLVADRYGRKPVIIMG 118 (442)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~-~~~~~~~~~G~l~dr~Grr~~~~~~ 118 (442)
+++++.+.+..|+..+.++ .+-.+.+.+=++... +..+..+=....+ ...+...+..++++|++|.+++-+.
T Consensus 23 ~~k~~~l~~m~f~i~f~y~----~lR~~KD~lvvt~~g---ae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~ 95 (491)
T PF03219_consen 23 LKKFLPLALMFFFILFNYT----ILRDLKDTLVVTAQG---AEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYII 95 (491)
T ss_pred HHHHHHHHHHHHHHHHHHH----HHHHhcCeEEEecCC---hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 4556666666666555433 223333333222211 1114444443333 4456677899999999999999877
Q ss_pred HHHHHHHHHHHhcc---------c----------------------hHHHHHHHHHHHHhhcchhhH-H-HHHhhhhccc
Q 013453 119 TASVVIFNTLFGLS---------V----------------------NFWMAVLTRFLLGSLNGLLGP-I-KAYACEIFRE 165 (442)
Q Consensus 119 ~~~~~i~~~~~~~a---------~----------------------~~~~l~~~r~l~G~~~g~~~~-~-~~~i~~~~~~ 165 (442)
...+.....++++. + +.|.+.+..++.-+-...... . ..+..|.++.
T Consensus 96 ~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~ 175 (491)
T PF03219_consen 96 IIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTV 175 (491)
T ss_pred HHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCH
Confidence 77666666655542 1 112222333333332233333 3 6788999999
Q ss_pred cchhhhhhhhhHhhhhHHHHHHHhhhhhcc-ccccCCCcccccccccCCcChhH----HHHHHHHHHHHHHHHhhccccC
Q 013453 166 EHQALGLSTVSTAWGIGLIIGPALGGFLAQ-PAEKYPNLFSSESLFGKFPYFLP----CLCISLFAFGVTIAAFWLPETL 240 (442)
Q Consensus 166 ~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~~~~~~~~~gw~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~e~~ 240 (442)
+|-.|..++++.+.++|.++++.+..++.+ ..+..+ .+...|... ..+..+.+++......++.+..
T Consensus 176 ~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~--------~~~~~~~~~l~~l~~~v~~~g~~i~~~~~~~~~~v 247 (491)
T PF03219_consen 176 EEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLP--------AGVDAWELSLNSLMGIVLILGIVIILLYRYMNKNV 247 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc--------cccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 999999999999999999999888888876 111100 001112211 1122222222233333333211
Q ss_pred CCCCCCCccchhhhhhhhhhhhhhhhhhcccccccccccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccC
Q 013453 241 HRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNY 320 (442)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (442)
..++...+..+ .+++++.+..-..+.+.++++|.+....+...++..........+-......+. +...+
T Consensus 248 l~~~~~~~~~~---------~~kk~k~k~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~-~~~~y 317 (491)
T PF03219_consen 248 LTDPRFYPSAK---------KKKKKKPKMSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYP-DPNDY 317 (491)
T ss_pred cCccccchhhh---------cccccCCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CchHH
Confidence 11100000000 000001111123455677888888777776666655554444333322222111 11111
Q ss_pred ChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHH
Q 013453 321 STQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARI 359 (442)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (442)
+ .-.|-.....++..++..+ .++.+-|++|-+....+
T Consensus 318 s-afmG~~~~~tGivtii~~~-l~~~iir~~GW~~~Ali 354 (491)
T PF03219_consen 318 S-AFMGKFSSWTGIVTIIMMF-LSSNIIRRFGWRTAALI 354 (491)
T ss_pred H-HHHHHHHHHHHHHHHHHHH-HHHHHHHHhhHHHHHHH
Confidence 1 1234455556666666664 66777777776655544
No 257
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=98.08 E-value=0.00097 Score=62.65 Aligned_cols=113 Identities=11% Similarity=-0.072 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhh------chhhHHHHHHHHHHHHHHHH
Q 013453 325 VGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLS------GFGLAFLLNCASVVKNLLSV 398 (442)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 398 (442)
.-..+..+.++-.+|+. +..+......+.+.+.+..+.=.+.+.++.+....+ ....-...++..+..+...+
T Consensus 309 ~~i~~~~fNvgD~vGR~-~~~~~~~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnG 387 (437)
T TIGR00939 309 PIICFLLFNLFDWLGRS-LTSKFMWPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNG 387 (437)
T ss_pred HHHHHHHHHHHHHHHhh-hhheeEeeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhh
Confidence 34555666777777777 332221110111133333333333433333332211 00111223333444444555
Q ss_pred HHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhccc
Q 013453 399 SIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAG 438 (442)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i 438 (442)
........+..+.+++++|..+..+....-.+|-.+|..+
T Consensus 388 y~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 388 YLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5556667778888999999999999888888888887654
No 258
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=98.06 E-value=0.0022 Score=59.29 Aligned_cols=296 Identities=12% Similarity=0.126 Sum_probs=158.5
Q ss_pred hhhHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHH-HHHhhhhhhhhhhcccCCchhhHHH
Q 013453 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMF-GRALTSVFWGLVADRYGRKPVIIMG 118 (442)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~-~~~~~~~~~G~l~dr~Grr~~~~~~ 118 (442)
+++++.+.+..++..+. ...+-.+.+.+.++.... ..+.++=+..-+ +..+..++.+++.++..|.+++-.-
T Consensus 26 ~~kflpl~Ll~f~I~~n----y~~lR~lKDslvv~~~ga---e~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~ 98 (509)
T COG3202 26 LKKFLPLALLFFCILFN----YNLLRSLKDSLVVTRQGA---ESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYII 98 (509)
T ss_pred HHHHHHHHHHHHHHHHH----HHHHHHhhhheEeecCcc---hhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHH
Confidence 34444444444444333 344556667776653221 116677666666 6778889999999999999999888
Q ss_pred HHHHHHHHHHHhcc---------ch-----------------------HHHHHHHHHHHHhhcchhhH-H-HHHhhhhcc
Q 013453 119 TASVVIFNTLFGLS---------VN-----------------------FWMAVLTRFLLGSLNGLLGP-I-KAYACEIFR 164 (442)
Q Consensus 119 ~~~~~i~~~~~~~a---------~~-----------------------~~~l~~~r~l~G~~~g~~~~-~-~~~i~~~~~ 164 (442)
+..+....+++++. ++ .|..-+...+.-+-...... . .....|.+.
T Consensus 99 ~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt 178 (509)
T COG3202 99 LGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITT 178 (509)
T ss_pred HHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 77777777777652 11 13333333333333333333 3 677899999
Q ss_pred ccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhcc----ccC
Q 013453 165 EEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLP----ETL 240 (442)
Q Consensus 165 ~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----e~~ 240 (442)
.+|-.|.+++++.+.+++..++..+..++....+......- ....+..+.+.+..+++.+.+.+++. +.|
T Consensus 179 ~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~------~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~~~ 252 (509)
T COG3202 179 IEEAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEFK------DLLLQILFIVIVILGIIAILLYRYINRNVLTDP 252 (509)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCc
Confidence 99999999999999999999999998888763221100000 01123333444444444444444432 222
Q ss_pred CCC-CCCCccchhhhhhhhhhhhhhhhhhcccccccccccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCccc
Q 013453 241 HRH-NDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLN 319 (442)
Q Consensus 241 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (442)
... +.++++ ++++.+..-..+.+.+.++|.++...+...+++.+........-.-....+ ...+
T Consensus 253 ~f~~~~~~kk-------------~~~k~k~~~~~s~k~i~~SkyL~~ial~vl~Y~v~inLvE~~wKs~ik~~~--~~~~ 317 (509)
T COG3202 253 LFYLRAKKKK-------------KKKKLKLGLIESFKMILRSKYLGAIALLVLAYGVSINLVEGVWKSGIKELY--PTTN 317 (509)
T ss_pred chhHHHhccc-------------ccccccCcHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhc--CChh
Confidence 210 000000 000011112234566778888777766666665554444322221111100 0000
Q ss_pred CChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHHH
Q 013453 320 YSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVL 363 (442)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (442)
--..-.|......++..++.....+.-+.||.|-.....+.-++
T Consensus 318 ~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~~~AlitPiv 361 (509)
T COG3202 318 EYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWFTGALITPLV 361 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHH
Confidence 01222344455556665555555677777776765554443333
No 259
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=98.05 E-value=0.0007 Score=61.35 Aligned_cols=50 Identities=12% Similarity=0.054 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhcc
Q 013453 388 CASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPA 437 (442)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~ 437 (442)
......+...+-.......+..+.+|++++-.+..+...+-..|-+.|..
T Consensus 348 ~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~ 397 (406)
T KOG1479|consen 348 FLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSL 397 (406)
T ss_pred HHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhH
Confidence 33334444444555667788888899888888877777777777766654
No 260
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.04 E-value=6.8e-06 Score=77.70 Aligned_cols=139 Identities=11% Similarity=0.049 Sum_probs=91.1
Q ss_pred HHHHHHHHHHhHhcchhhchhHHHHHHH-hcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcc----cCCchhhHH
Q 013453 43 LFSIWIIVLCTALPISSLFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR----YGRKPVIIM 117 (442)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr----~Grr~~~~~ 117 (442)
++...+..+......+.+...+|.+.++ .|.+..+ .+.+...+.++.+++.++.|+++|| ..+|.....
T Consensus 275 vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~------a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~ 348 (495)
T KOG2533|consen 275 VWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQ------ANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIV 348 (495)
T ss_pred HHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHH------hccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 4556667777777788888899999988 5688888 8999999999999999999999999 667777766
Q ss_pred HHHHHHHHH-HHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccch-hhhhhhhhHhhhhHHHHHH
Q 013453 118 GTASVVIFN-TLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQ-ALGLSTVSTAWGIGLIIGP 187 (442)
Q Consensus 118 ~~~~~~i~~-~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r-~~~~~~~~~~~~~g~~~g~ 187 (442)
...+..+.. +.....++.......-+....+.....+ +.....+...+..| -...+....+.+.+..++|
T Consensus 349 ~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~ 421 (495)
T KOG2533|consen 349 FLCLYAIIGAISLLAAAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISG 421 (495)
T ss_pred HHHHHHHHHHHHHHhhccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhh
Confidence 665555544 4444443333333333333334444555 46777777655444 3344444444444444433
No 261
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.98 E-value=0.00018 Score=66.69 Aligned_cols=107 Identities=17% Similarity=0.244 Sum_probs=82.0
Q ss_pred hhhHHHHHHHHHHHHHHhcc---ch------HHHHHHHHHHHHhhcchhhH-HHHHhhhhcccc---chhhhhhhhhHhh
Q 013453 113 PVIIMGTASVVIFNTLFGLS---VN------FWMAVLTRFLLGSLNGLLGP-IKAYACEIFREE---HQALGLSTVSTAW 179 (442)
Q Consensus 113 ~~~~~~~~~~~i~~~~~~~a---~~------~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~---~r~~~~~~~~~~~ 179 (442)
|+++++.++..+|.++..++ ++ .+.++++-++.++|.|..-| ..++.+|.++++ +|.+.+.++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 56788888888888884432 22 36788889999999999999 599999999865 4667888999999
Q ss_pred hhHHHHHHHhhhhhccccccCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhh
Q 013453 180 GIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFW 235 (442)
Q Consensus 180 ~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (442)
++|..+++.+.+++.+ +++|...|.+.++..+++++....
T Consensus 82 n~G~~~~~~~~~~i~~----------------~~~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQ----------------NYGWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHCCCHHHH----------------CS-HHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhHhhcccchhhcc----------------ccchhhhhhHHHHHHHHHHHHHHh
Confidence 9999999999999987 566666667776666665554443
No 262
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.98 E-value=0.00013 Score=70.18 Aligned_cols=195 Identities=18% Similarity=0.165 Sum_probs=129.9
Q ss_pred hhHHHHHHHHHHhHhcchhhchhHHHHHHH-hcccc---cchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCC-chhh
Q 013453 41 TELFSIWIIVLCTALPISSLFPFLYFMIKD-FQIAK---REEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGR-KPVI 115 (442)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Gr-r~~~ 115 (442)
|.+....+..++.++.+.......|..... ++-+. .+ .++....+.++..+++.+.|.+..+++| |+.+
T Consensus 310 r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~------~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~l 383 (599)
T PF06609_consen 310 RGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITE------IGWISSPVGFGSCAGAVILGLLFSKIRHIKWQL 383 (599)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccce------eehhhhhHHHHHHHHHHHHHHHHHHccchhHHH
Confidence 334444556666666555555556655443 33333 24 6788888899999999999999998886 5555
Q ss_pred HHHHHHHHHHHHHHhc--cchHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhh
Q 013453 116 IMGTASVVIFNTLFGL--SVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGF 192 (442)
Q Consensus 116 ~~~~~~~~i~~~~~~~--a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 192 (442)
+++.+++.++..+++. .+|....+..-++.|++.|.... ......-..|+++-+.+.++......+|..+|..+..-
T Consensus 384 i~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~ 463 (599)
T PF06609_consen 384 IFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNA 463 (599)
T ss_pred HHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 6777776665444443 34555666778899998777655 56666667899999999999999998888887766544
Q ss_pred hccccc-------------------------------c-------CCCc---------ccccccccCCcChhHHHHHHHH
Q 013453 193 LAQPAE-------------------------------K-------YPNL---------FSSESLFGKFPYFLPCLCISLF 225 (442)
Q Consensus 193 l~~~~~-------------------------------~-------~~~~---------~gw~~~~~~~~~~~~~~~~~~~ 225 (442)
+....- + .++. ..-+..+ ..+||.+++.....
T Consensus 464 I~~n~~~~~l~~~v~~a~~~aglp~~sl~~li~a~~~~~~~a~~~iPGit~~i~~a~~~A~~~aY-a~ay~~V~~~siaF 542 (599)
T PF06609_consen 464 IFTNKLPKELPKYVAPAALAAGLPESSLPALIEALAAGNLEALAAIPGITPEIIAAVVAAFQEAY-AHAYRYVYYSSIAF 542 (599)
T ss_pred HHHhhhhHhHHHHHHHHHHhcCCChhhHHHHHHHHhccChhHHhhCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 332000 0 0000 0012334 45788888888888
Q ss_pred HHHHHHHHhhccccCCC
Q 013453 226 AFGVTIAAFWLPETLHR 242 (442)
Q Consensus 226 ~~~~~~~~~~~~e~~~~ 242 (442)
+.++++..+++++..+.
T Consensus 543 G~vaiiaa~fl~d~~~~ 559 (599)
T PF06609_consen 543 GVVAIIAALFLGDIDKY 559 (599)
T ss_pred HHHHHHHHHHcCChHHh
Confidence 88888888888876544
No 263
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.86 E-value=0.00071 Score=65.98 Aligned_cols=142 Identities=19% Similarity=0.115 Sum_probs=98.2
Q ss_pred HHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhccchHHH---HHHHHHHHHhhcchhhH-HHHHhhh
Q 013453 86 YVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWM---AVLTRFLLGSLNGLLGP-IKAYACE 161 (442)
Q Consensus 86 ~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a~~~~~---l~~~r~l~G~~~g~~~~-~~~~i~~ 161 (442)
.................+...|++|||.....+.++..++.+..++..+... ..+...+...+.+...- ...+.+|
T Consensus 354 ~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 433 (521)
T KOG0255|consen 354 LNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAE 433 (521)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333333455555566689999999999999999999999999988765433 44444444444444433 5889999
Q ss_pred hccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCcccccccccCCcChhHHHHHHHHHHH-HHHHHhhccccC
Q 013453 162 IFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFG-VTIAAFWLPETL 240 (442)
Q Consensus 162 ~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~ 240 (442)
.+|...|..+.+.......+|.+++|.+....... ... ....+.+....+ ..+...++||+.
T Consensus 434 l~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~~---------------~~~--~~~~~~~~~~~l~~~~~~~~lpet~ 496 (521)
T KOG0255|consen 434 LIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQM---------------FPL--LGLILFGWLALLLGLLSLLLLPETK 496 (521)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---------------ccc--chHHHHHHHHHHHHHHHHhcCcccC
Confidence 99999999999999999999999999987665431 111 111222333333 345558899987
Q ss_pred CCCC
Q 013453 241 HRHN 244 (442)
Q Consensus 241 ~~~~ 244 (442)
....
T Consensus 497 ~~~l 500 (521)
T KOG0255|consen 497 GKPL 500 (521)
T ss_pred CCCC
Confidence 6544
No 264
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.79 E-value=3.6e-05 Score=70.94 Aligned_cols=160 Identities=12% Similarity=0.051 Sum_probs=108.8
Q ss_pred ccccccc-hhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHh-hch
Q 013453 276 KSLLKNW-PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI-LGP 353 (442)
Q Consensus 276 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 353 (442)
+..+++| .++.+...-+.--+.++++...+..|++...... +|+|.+++.-+...++.-.-.... +++++.|| +|+
T Consensus 14 ~~~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~g-Lg~~~~~A~~l~~~y~slVY~t~i-~GG~laDr~LG~ 91 (498)
T COG3104 14 MKFFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDG-LGFDETHATGLFSAYGSLVYLTPI-IGGWLADRVLGT 91 (498)
T ss_pred cccCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhcccc-CCcChHhhHHHHHHHHHHHHHHHH-HHHHHHHHhcch
Confidence 3455544 4666666777777888888888888887654433 789998888777776655555555 66666555 799
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChh--hhhHHHHHHHHHHHHH
Q 013453 354 IMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQD--QRGAANGIAMTGMSLF 431 (442)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~~g 431 (442)
|+.+..+.++..++.+++.......... +.+...+...+...+=+....++.|.+|++ +|-.++++..+..++|
T Consensus 92 ~~tI~lGail~~iGh~~L~~~~~~~~~g----l~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiG 167 (498)
T COG3104 92 RRTIVLGAILMAIGHLVLAISSVSGPGG----LYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIG 167 (498)
T ss_pred hHHHHHHHHHHHHHHHHHhccccccccH----HHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehH
Confidence 9999999999999988877653011111 112222222333445566777788877543 4777888888889999
Q ss_pred HhhhcccCCC
Q 013453 432 KAAGPAGGGA 441 (442)
Q Consensus 432 ~~~gp~i~G~ 441 (442)
+.++|.+.|+
T Consensus 168 sl~~p~i~~~ 177 (498)
T COG3104 168 SLIAPIITGL 177 (498)
T ss_pred HHHHHHHHHH
Confidence 9999988765
No 265
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=97.68 E-value=0.0014 Score=56.43 Aligned_cols=108 Identities=15% Similarity=0.019 Sum_probs=72.1
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhcchhhHHHHHhhhhc
Q 013453 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIF 163 (442)
Q Consensus 84 ~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~ 163 (442)
.|.+.-+-.+...+..+......||+---.=..+..++.+.+.++.+++++.++-+.+-.+..++.|.--...--++..+
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss~Y 143 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSSRY 143 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhccC
Confidence 45666666677777788888889987654445566777888889999999999999998888888777655433334444
Q ss_pred cccchhhhhhhhhHhhhhHHHHHHHhhhhhcc
Q 013453 164 REEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 164 ~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (442)
++. .++.+..+.+.+..+|..--..+.+
T Consensus 144 ~~~----~i~~WSSGTGgAGliGa~SYa~lT~ 171 (409)
T KOG3880|consen 144 PSI----VIAGWSSGTGGAGLIGASSYAFLTS 171 (409)
T ss_pred CCc----eeccccCCCCcchhhhhhHHHHHhh
Confidence 432 3444555555555666544444443
No 266
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.54 E-value=0.008 Score=47.38 Aligned_cols=99 Identities=16% Similarity=0.055 Sum_probs=71.4
Q ss_pred HHHHHHHHHhhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhccc
Q 013453 332 TGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRA 411 (442)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (442)
......+.++ ..+.+.++.|.|+.+.++.+...+-.....+ ..+..++....+.++.....+.....++.+.
T Consensus 46 ~Y~~~~~s~l-~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~-------~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~ 117 (156)
T PF05978_consen 46 LYGSFAISCL-FAPSIVNKLGPKWSMILGSLGYAIYIASFFY-------PNSYTLYPASALLGFGAALLWTAQGTYLTSY 117 (156)
T ss_pred HHHHHHHHHH-hHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh-------hhHHHHHHHHHHHhhhhHHhhHhhhHHHHHc
Confidence 3444444454 4556778889999998888777766555433 2233456666667777777888888888888
Q ss_pred CChhhhhHHHHHHHHHHHHHHhhhccc
Q 013453 412 VDQDQRGAANGIAMTGMSLFKAAGPAG 438 (442)
Q Consensus 412 ~~~~~~g~~~g~~~~~~~~g~~~gp~i 438 (442)
.+++.+++-.|+.-.+.+.+.++|..+
T Consensus 118 s~~~~~~~~~~ifw~i~~~s~i~G~~~ 144 (156)
T PF05978_consen 118 STEETIGRNTGIFWAIFQSSLIFGNLF 144 (156)
T ss_pred CCHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 899999999999988888888877654
No 267
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.45 E-value=0.0014 Score=56.17 Aligned_cols=119 Identities=17% Similarity=0.041 Sum_probs=79.5
Q ss_pred ccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhhc--hhhHHHHHHHHH
Q 013453 314 KLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSG--FGLAFLLNCASV 391 (442)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 391 (442)
..+.+|+|.++...+.....++..++ + ..+.+.|+.+++..+.++.+...++...+.......- ...|... +...
T Consensus 28 Lk~~l~~sq~~l~~l~~~~~~G~~~G-~-~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~-~~~~ 104 (250)
T PF06813_consen 28 LKSRLGYSQSQLNTLSTAGDIGSYFG-I-LAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMC-LFLF 104 (250)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHhhcc-H-HHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHH-HHHH
Confidence 44568999999999998888888775 4 6788888889999999999998888776654433221 2233322 2222
Q ss_pred HHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhc
Q 013453 392 VKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGP 436 (442)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp 436 (442)
..+...............+.+| ++||++.|+.-....+++++-.
T Consensus 105 l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t 148 (250)
T PF06813_consen 105 LGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFT 148 (250)
T ss_pred HHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHH
Confidence 2222222233333333445687 6899999999888888877643
No 268
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=97.40 E-value=0.0087 Score=50.74 Aligned_cols=241 Identities=10% Similarity=0.002 Sum_probs=107.5
Q ss_pred cchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCcccccccccCCcChhHHHHHHHHHHHHHHHHhhccccCCCCCC
Q 013453 166 EHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHND 245 (442)
Q Consensus 166 ~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 245 (442)
|+|+........+.++|.++....- +.+.. -+... +..|+..+.+.+++.++-++.+..+ +++-+...
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF--~~~~~--------~~~~~-~~~W~~I~si~~lL~~IpLIly~if-Gk~fd~~~ 69 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPF--LISSS--------VVIAL-TNNWQWILSIFILLIFIPLILYIIF-GKNFDIYS 69 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhH--Hhcch--------HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHh-cccccccC
Confidence 5677777777778888887755432 22100 00011 4557777677776665555554444 22211111
Q ss_pred CCccchhhhhhhhhhhhhhhhhhcccccccccccccchhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccC----C
Q 013453 246 DDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNY----S 321 (442)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 321 (442)
++ ++++ .++.+.+.+.+..+.+|++..|...+.+..+-....-- ..+.+..........+. +
T Consensus 70 ~~-~k~~-----------k~~~~~~~~~s~~~~LK~K~tw~w~~~Yg~wLv~~V~p--~t~~~~~~~~~~s~~ni~~~~~ 135 (267)
T PF07672_consen 70 PK-EKQE-----------KENSTLSKKPSYKSILKEKETWKWILIYGIWLVVVVFP--FTPSWFNILIWISPANIKSVVS 135 (267)
T ss_pred cc-cccc-----------cccccccccchHHHHHccchHHHHHHHHHHHheeEEEe--ccchhHhHhhhcCccccccccc
Confidence 11 0000 00011123456788999999887777666654322111 00111110000000111 0
Q ss_pred hh----HHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHH----HHHHHHHHHHHHHHHhhchhhHHHHHHHHHHH
Q 013453 322 TQ----MVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAG----VLTIPLLTSYPYIAMLSGFGLAFLLNCASVVK 393 (442)
Q Consensus 322 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (442)
.. .......+.-.+..++.+.++.+-....+||+.+.... ++..+..++ .+.....+........+.+++.
T Consensus 136 ~~~~~~~~~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~-~~~~g~~~~~~~~~f~I~~Fl~ 214 (267)
T PF07672_consen 136 GGGFNWIIPIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVV-VYFVGPGNAAGFAFFYIFGFLA 214 (267)
T ss_pred ccccchhhHHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHH-HHHhCcchHHHHHHHHHHHHHH
Confidence 11 11222333333334444444444434455666544322 222222222 1111111112233355666666
Q ss_pred HHHHHHHHHhhhhhhcc--cCChhhhhHHHHHHHHHHHHHHh
Q 013453 394 NLLSVSIITGLFILQNR--AVDQDQRGAANGIAMTGMSLFKA 433 (442)
Q Consensus 394 ~~~~~~~~~~~~~~~~~--~~~~~~~g~~~g~~~~~~~~g~~ 433 (442)
+.+.-+..++......| -..|++.|...|+.--++++.-.
T Consensus 215 G~f~WgiQ~ViL~lPhEyK~~~pk~ig~~Fg~iWGfGY~~yT 256 (267)
T PF07672_consen 215 GFFLWGIQGVILNLPHEYKGYNPKKIGIQFGLIWGFGYIFYT 256 (267)
T ss_pred HHHHHhhhHHHhcChhhhcCCCcceehhHHHHHHHHHHHHHH
Confidence 66666666665555444 23556677777766555555443
No 269
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.34 E-value=0.0057 Score=56.06 Aligned_cols=108 Identities=17% Similarity=0.257 Sum_probs=77.4
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHH-----HHHHHHHhccchHHHHHHHHHHHHhhcchhhH-HHH
Q 013453 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV-----VIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKA 157 (442)
Q Consensus 84 ~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~-----~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~ 157 (442)
..+....|.+|-.++.--...+ |+ |++.+.+.+-. .+.....-+.++.|..++.-+..|+.+|..++ ...
T Consensus 283 Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~ 358 (402)
T PF02487_consen 283 YRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTFY 358 (402)
T ss_pred HHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 7777777777766654332221 33 44444333222 22223334568999999999999998888777 688
Q ss_pred HhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhcc
Q 013453 158 YACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 158 ~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (442)
.+.|..++++|..+++....+-++|..++..++-.+-.
T Consensus 359 ~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le~ 396 (402)
T PF02487_consen 359 RISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLEP 396 (402)
T ss_pred HHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 88888999999999999999999999999988866643
No 270
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.28 E-value=0.0048 Score=42.07 Aligned_cols=67 Identities=18% Similarity=0.215 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHH
Q 013453 288 IIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAG 361 (442)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (442)
-..++++.........+++.|+. +.|+++.++|.+.++..+..+++.+ +.+.+.||.++++......
T Consensus 6 k~~yf~~f~~~g~~~Pfl~~~~~------~~Gl~~~~iGil~~i~~~~~~~~~p-l~g~laDk~~~~~~~l~~~ 72 (77)
T PF12832_consen 6 KAFYFFYFAALGCLYPFLPLYLK------QLGLSPSQIGILSAIRPLIRFLAPP-LWGFLADKFGKRKVILLGS 72 (77)
T ss_pred HHHHHHHHHHHHHHHhhhhHhhh------hcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCccHHHHHHH
Confidence 34555555555566566666654 3699999999999999999999999 6666777777766655443
No 271
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.15 E-value=0.0017 Score=61.31 Aligned_cols=155 Identities=14% Similarity=0.142 Sum_probs=105.5
Q ss_pred ccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhcc----------chHHHHHHHH
Q 013453 73 IAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS----------VNFWMAVLTR 142 (442)
Q Consensus 73 ~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a----------~~~~~l~~~r 142 (442)
.++.. .|.+..+..++..++..+..+..-++.-|+++....++..+..+....- ++.+-.+.--
T Consensus 252 fs~~f------~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~ 325 (433)
T PF03092_consen 252 FSPSF------YGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDT 325 (433)
T ss_pred cCHHH------HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhH
Confidence 56655 8888888888889999999888888888999988888777666543221 1222222233
Q ss_pred HHHHhhcch-hhHHHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccccccCCCcccccccccCCcChhHHHH
Q 013453 143 FLLGSLNGL-LGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLC 221 (442)
Q Consensus 143 ~l~G~~~g~-~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~ 221 (442)
++..+..+. ..|...+++|..|+...+..+++.....++|..++..++..+.+..+... ..| .+.....++
T Consensus 326 ~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~------~~f--~~l~~lili 397 (433)
T PF03092_consen 326 ILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTR------DDF--SNLWLLILI 397 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc------ccc--cchHHHHHH
Confidence 455554444 45578899999999999999999999999999999999999988443211 112 122233344
Q ss_pred HHHHHHHHHHHHhhccccCC
Q 013453 222 ISLFAFGVTIAAFWLPETLH 241 (442)
Q Consensus 222 ~~~~~~~~~~~~~~~~e~~~ 241 (442)
..+..++.+....++|+..+
T Consensus 398 ~~~~~ll~l~ll~lLp~~~~ 417 (433)
T PF03092_consen 398 CSVIQLLPLPLLFLLPPQKR 417 (433)
T ss_pred HHHHHHHHHHHHHHcCCCch
Confidence 44555555555666776543
No 272
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.07 E-value=0.0034 Score=58.79 Aligned_cols=119 Identities=15% Similarity=0.054 Sum_probs=86.6
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHH
Q 013453 318 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLS 397 (442)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (442)
.+-+.+..|++.+...++..+..+..+.|-.|...-|+.+..+.++..++.+++......++. +..+.+.+=+..+.+
T Consensus 66 ~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~--~~y~mL~~R~l~Gvg 143 (488)
T KOG2325|consen 66 PTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNG--VKYLMLVARILTGVG 143 (488)
T ss_pred CCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccc--hHHHHHHHHHHcCcC
Confidence 566777899999999999999999777776666545888889999999998888655554432 222333333333344
Q ss_pred HHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhccc
Q 013453 398 VSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAG 438 (442)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i 438 (442)
.+.....-.+++...-.++|.++++..+....+|.++||.+
T Consensus 144 ~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~ 184 (488)
T KOG2325|consen 144 VGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTI 184 (488)
T ss_pred cccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHH
Confidence 45566777888887777889999988888778888888765
No 273
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=97.01 E-value=0.081 Score=46.52 Aligned_cols=100 Identities=12% Similarity=0.170 Sum_probs=65.2
Q ss_pred HHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhcchhhHH-HHHhhhhccc--cch-
Q 013453 93 FGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFRE--EHQ- 168 (442)
Q Consensus 93 ~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~--~~r- 168 (442)
+..+..+++.+.+..++|-|+++.++...+...-. .-+=+.+..++-.-...|++.+..+.. -+|+++.-.. ++|
T Consensus 69 ~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA-~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ya~~~~ 147 (390)
T KOG3097|consen 69 LSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIA-ANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNYANQRG 147 (390)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH-hhcchhHHhhccHHHhhccccccccccCcceecHHHHHHHHhhh
Confidence 33445556666889999999999988877755432 223467888999999999998887774 5565554332 233
Q ss_pred --------hhhhhhhhHhhhhHHHHHHHhhhhh
Q 013453 169 --------ALGLSTVSTAWGIGLIIGPALGGFL 193 (442)
Q Consensus 169 --------~~~~~~~~~~~~~g~~~g~~~~~~l 193 (442)
.+..+.+.+....+...|..++..+
T Consensus 148 ~q~~~~~~~~ffg~Ffii~~~~qv~gn~issli 180 (390)
T KOG3097|consen 148 EQAGDGMKVRFFGEFFIIFQCAQVWGNLISSLI 180 (390)
T ss_pred hhccCceeeeehhHHHHHHHHHHHHHHHHHHHH
Confidence 3455555555555555555544443
No 274
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.74 E-value=0.023 Score=53.07 Aligned_cols=129 Identities=9% Similarity=-0.098 Sum_probs=93.6
Q ss_pred hchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhc------cc
Q 013453 60 LFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL------SV 133 (442)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~------a~ 133 (442)
....+..+.+.-|.++.. +|..-+...+....+.+...++.+|+|..|.=+++...-.++..++.. .+
T Consensus 277 f~~lmt~yl~~~G~s~~~------igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~ 350 (432)
T PF06963_consen 277 FGGLMTAYLKSQGYSPSV------IGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSP 350 (432)
T ss_pred CcHHHHHHHHHCCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 455666677777999999 999999999999999999999999999988877776644433333221 22
Q ss_pred ----hHHHHHHHHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhc
Q 013453 134 ----NFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (442)
Q Consensus 134 ----~~~~l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 194 (442)
+...++.+-.+.=+|-=.+.. ..-++-|..|+++||...|.-....++-..+-..++-.+.
T Consensus 351 ~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~~ 416 (432)
T PF06963_consen 351 FSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIFP 416 (432)
T ss_pred chhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 233344444444445223333 5888999999999999999999999998888777665443
No 275
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.73 E-value=0.035 Score=51.99 Aligned_cols=109 Identities=17% Similarity=0.304 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhc---ccCCchhhHHHHHHHHHHHHHHhcc------------------chHHHHHHHH
Q 013453 84 AGYVGSSFMFGRALTSVFWGLVAD---RYGRKPVIIMGTASVVIFNTLFGLS------------------VNFWMAVLTR 142 (442)
Q Consensus 84 ~g~~~s~~~~~~~~~~~~~G~l~d---r~Grr~~~~~~~~~~~i~~~~~~~a------------------~~~~~l~~~r 142 (442)
.+.-.-...++..+++.+.+.+++ ++||++++.++..+..+..++.-.. +++...++.-
T Consensus 281 ~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~ 360 (461)
T KOG3098|consen 281 IAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIG 360 (461)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHH
Confidence 344444555666666666777765 5899999999998888888776542 2456677777
Q ss_pred HHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhh
Q 013453 143 FLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (442)
Q Consensus 143 ~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 193 (442)
++.|++.+.... .+.++.+.+ +++|..+.++...-..+++.++-......
T Consensus 361 ~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~~ 411 (461)
T KOG3098|consen 361 FLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPYL 411 (461)
T ss_pred HHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 999999999888 488888888 67888898888888888777665554443
No 276
>PRK03612 spermidine synthase; Provisional
Probab=96.70 E-value=0.12 Score=50.05 Aligned_cols=141 Identities=13% Similarity=0.059 Sum_probs=78.9
Q ss_pred HHHHHHhHhcchhhchhHH-HHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHH--HH
Q 013453 47 WIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS--VV 123 (442)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~--~~ 123 (442)
....|+.++..-.+-.+.. .+..-+|.+..+ .+.+.+++..|..+|+.+.+++.++--|+. ..+-+.+ .+
T Consensus 20 ~~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~------~~~ii~~fl~glalGs~l~~~~~~~~~~~~-~~~e~~i~l~~ 92 (521)
T PRK03612 20 LAAVFVCAACGLVYELLLGTLASYLLGDSVTQ------FSTVIGLMLFAMGVGALLSKYLLRDAAAGF-VAVELLLALLG 92 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHH------HHHHHHHHHHHHHHHHHHHHhhhhhHHHHH-HHHHHHHHHHH
Confidence 3334444443333333333 333446777777 899999999999999999998874322222 1111111 11
Q ss_pred -HHHHHH----hccchH-HHHHHHHHHHHhhcchhhHH-HHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhcc
Q 013453 124 -IFNTLF----GLSVNF-WMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 124 -i~~~~~----~~a~~~-~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (442)
++..+. ++...+ ..++..-++.++..|+..|. ..+..+ ...++-++..|.......+|+++|.++.+++.-
T Consensus 93 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~-~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLl 170 (521)
T PRK03612 93 GLSALILYAAFAFQGLSRLLLYVLVLLIGLLIGMEIPLLMRILQR-IRDQHLGHNVATVLAADYLGALVGGLAFPFLLL 170 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccccchhhhhhhhHhHHhHHHHHHHHHHHHHHH
Confidence 111111 111111 12233345667777777774 444433 222335677888899999999999999888764
No 277
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.66 E-value=0.0047 Score=56.52 Aligned_cols=122 Identities=17% Similarity=0.088 Sum_probs=82.3
Q ss_pred HHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCC-chhhHHHHHHHHHHHHHHh-c---cchHHHHHHHH
Q 013453 68 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGR-KPVIIMGTASVVIFNTLFG-L---SVNFWMAVLTR 142 (442)
Q Consensus 68 ~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Gr-r~~~~~~~~~~~i~~~~~~-~---a~~~~~l~~~r 142 (442)
.+.-|.+... .|++.....++.++++...|.+.||... |+++++......++..... + ....+.++..-
T Consensus 293 l~~sgY~~~~------aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~ 366 (480)
T KOG2563|consen 293 LCPSGYEGVF------AGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTC 366 (480)
T ss_pred cccccCCccc------cchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhH
Confidence 3444566556 8999999999999999999999999864 6666666666555532221 1 12345566666
Q ss_pred HHHHhhcchhhHH-HHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhcc
Q 013453 143 FLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 143 ~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (442)
.+.|.+.....|. .-+-.|.+-|..-+.-.|+.+....+=.++-..+-+...+
T Consensus 367 ~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~ 420 (480)
T KOG2563|consen 367 GLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAE 420 (480)
T ss_pred HHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhh
Confidence 7888877777775 6677776655555566777766666555555555666655
No 278
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=96.49 E-value=0.6 Score=42.06 Aligned_cols=102 Identities=11% Similarity=0.020 Sum_probs=64.3
Q ss_pred CcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHH
Q 013453 316 GGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNL 395 (442)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (442)
+++|++..+++.++........+.+. ..+.+.||+|||+......++..+.++.-.. .....+.+.-++.+.
T Consensus 62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~-~~G~laD~~Grk~~cl~~cily~~scl~k~~-------~~~~~L~~GRvlgGi 133 (354)
T PF05631_consen 62 ESYGFSEHQIAILFVAGFASSAIFGT-FVGSLADRYGRKKACLLFCILYSLSCLTKHS-------SNYPVLLLGRVLGGI 133 (354)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCchHHHHHHHHHHHHHHHHHhc-------cccHHHHHHHHHHHH
Confidence 34799999999999988888888888 5566777789999988888887777754322 112223333344444
Q ss_pred HHHHHHHhhhhhh-----cccCChhhhhHHHHHHH
Q 013453 396 LSVSIITGLFILQ-----NRAVDQDQRGAANGIAM 425 (442)
Q Consensus 396 ~~~~~~~~~~~~~-----~~~~~~~~~g~~~g~~~ 425 (442)
.........-++. .+-+|++..+...+...
T Consensus 134 aTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~t 168 (354)
T PF05631_consen 134 ATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLAT 168 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 4444444433332 23457676666666444
No 279
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=96.46 E-value=0.015 Score=57.68 Aligned_cols=123 Identities=9% Similarity=-0.061 Sum_probs=78.0
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhhc--hhhHHHHHHHHHHHHH
Q 013453 318 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSG--FGLAFLLNCASVVKNL 395 (442)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 395 (442)
+|++...+..+........-+...+.+...|+++|+++.+.++.++..++..++........ .......++...+...
T Consensus 18 lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~ 97 (654)
T TIGR00926 18 LGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIAL 97 (654)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHh
Confidence 57788777766666555555555546666677899999999998888888776655322111 1111112222222223
Q ss_pred HHHHHHHhhhhhhcccCChh---hhhHHHHHHHHHHHHHHhhhcccCC
Q 013453 396 LSVSIITGLFILQNRAVDQD---QRGAANGIAMTGMSLFKAAGPAGGG 440 (442)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~---~~g~~~g~~~~~~~~g~~~gp~i~G 440 (442)
+..+.-+...+...+.++++ .+-+...++....++|+.+++.+.+
T Consensus 98 G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~ 145 (654)
T TIGR00926 98 GTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITP 145 (654)
T ss_pred hccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33345566777777767543 4777888888889999988877654
No 280
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.36 E-value=0.07 Score=36.87 Aligned_cols=72 Identities=21% Similarity=0.169 Sum_probs=55.4
Q ss_pred HHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHH
Q 013453 297 HDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIA 375 (442)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (442)
.-+.+...+|... ++.++|..+.|++.+.+.++.+++.+ ...++.++.++++.+..+.+...+......+..
T Consensus 7 gRFayTplLP~M~------~~~~ls~~~ag~lasaNy~GYL~GAl-~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~ 78 (85)
T PF06779_consen 7 GRFAYTPLLPLMQ------ADGGLSLSQAGWLASANYLGYLVGAL-LASRLPRHSRPRRLLRAGLLLTVLSTAAMALTH 78 (85)
T ss_pred HHHHHHhHhHHHH------HhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3455555666544 44699999999999999999999998 566666666778888888888888877776653
No 281
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=95.99 E-value=0.0022 Score=57.68 Aligned_cols=110 Identities=10% Similarity=0.079 Sum_probs=2.8
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHh-hchhHHHHHHHHHHHHHHHHHHHHHHhhc-------hhhHHHHHHHHHHHHHHHHH
Q 013453 328 VLAITGFSLLVFQLSLYPFLERI-LGPIMVARIAGVLTIPLLTSYPYIAMLSG-------FGLAFLLNCASVVKNLLSVS 399 (442)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 399 (442)
.+..+.++-.+|+. +..+...+ .++|++ .+..+.=.+.+.++......+. .....+.++..++.+...+-
T Consensus 187 ~fl~Fn~gD~iGR~-l~~~~~~~~~~~~~l-~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGy 264 (309)
T PF01733_consen 187 LFLLFNLGDFIGRF-LASWPRWPGPSPRWL-WILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGY 264 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcch-hcceeEecccccccH-HHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccch
Confidence 45567788888887 44433222 123333 3332333333333322211100 01112233333344445555
Q ss_pred HHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhcccC
Q 013453 400 IITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGG 439 (442)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i~ 439 (442)
.......+..+.+++++|..+..+....-..|-.+|..+.
T Consensus 265 l~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 265 LSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp --HHHH----------------------------------
T ss_pred hhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566777778888889999998888888888888887654
No 282
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=95.81 E-value=0.57 Score=44.55 Aligned_cols=118 Identities=8% Similarity=0.025 Sum_probs=75.1
Q ss_pred ChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhhchh-------------------
Q 013453 321 STQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFG------------------- 381 (442)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------- 381 (442)
+++....+.+..-+...+.-..+..++.+|.+|+++...........+.++.+...+....
T Consensus 41 gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~ 120 (472)
T TIGR00769 41 GAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFM 120 (472)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhH
Confidence 4466777766655555555233667778888998887776666555555554442211000
Q ss_pred -------hHHHHHHHHHHHHHHHHHHHH-hhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhcccC
Q 013453 382 -------LAFLLNCASVVKNLLSVSIIT-GLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGG 439 (442)
Q Consensus 382 -------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i~ 439 (442)
.|. ..+..+..-..+....+ ..+..++|...+++..+-.++....+++|..+++.+.
T Consensus 121 ~~i~~~~~W~-~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~ 185 (472)
T TIGR00769 121 GFIAILRIWS-FALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTI 185 (472)
T ss_pred HHHHHHhhhh-HHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111 11222222233444444 7899999999999999999999999999999998654
No 283
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=95.77 E-value=0.23 Score=44.63 Aligned_cols=150 Identities=9% Similarity=-0.030 Sum_probs=82.9
Q ss_pred hhHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHH
Q 013453 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (442)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~ 120 (442)
+..+.+..+.++...+.-+.......++.+++.+.-. . ...-..+-.....+..++.|...|+..|+|++...+.
T Consensus 27 ~~~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~--l---vAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~ 101 (503)
T KOG2601|consen 27 STVIFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLL--L---VAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLL 101 (503)
T ss_pred ceeehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceeh--h---HHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHh
Confidence 3445677777777777766666777777777654322 0 2222223334456777888999999999999877665
Q ss_pred HHHHHHHH------Hhcc------chHHHHHHHHHHHHhhcc--hhhH-HHHHh--hhhc----cccchhhh---hhhhh
Q 013453 121 SVVIFNTL------FGLS------VNFWMAVLTRFLLGSLNG--LLGP-IKAYA--CEIF----REEHQALG---LSTVS 176 (442)
Q Consensus 121 ~~~i~~~~------~~~a------~~~~~l~~~r~l~G~~~g--~~~~-~~~~i--~~~~----~~~~r~~~---~~~~~ 176 (442)
+--++.++ ..+. .++..+..+-++.-.-++ -... +.+++ .||. ..+.+... .+...
T Consensus 102 lqNlSv~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir 181 (503)
T KOG2601|consen 102 LQNLSVIVAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIR 181 (503)
T ss_pred hccHHHHHHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhh
Confidence 43332222 2221 245555544444333222 2222 22222 2333 22333333 24444
Q ss_pred HhhhhHHHHHHHhhhhhcc
Q 013453 177 TAWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 177 ~~~~~g~~~g~~~~~~l~~ 195 (442)
..-..--.+.|.+.|.+.+
T Consensus 182 ~iDq~tn~Lapv~tg~Iit 200 (503)
T KOG2601|consen 182 GIDQSTNLLAPVITGLIIT 200 (503)
T ss_pred hhhhhhhchhhhhhcccce
Confidence 4455567788999998887
No 284
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=95.65 E-value=0.2 Score=47.39 Aligned_cols=109 Identities=13% Similarity=0.013 Sum_probs=73.6
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhcccCCc-hhhHHHHHH---HHHHHHHHhc---------cchHHHHHHHHHHHHhhcc
Q 013453 84 AGYVGSSFMFGRALTSVFWGLVADRYGRK-PVIIMGTAS---VVIFNTLFGL---------SVNFWMAVLTRFLLGSLNG 150 (442)
Q Consensus 84 ~g~~~s~~~~~~~~~~~~~G~l~dr~Grr-~~~~~~~~~---~~i~~~~~~~---------a~~~~~l~~~r~l~G~~~g 150 (442)
.-.....+.++-.+|..+..+.. .-++| +.+.+..+. +....++|.. -++-+..++.-++.|+..|
T Consensus 309 ~~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnG 387 (437)
T TIGR00939 309 PIICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNG 387 (437)
T ss_pred HHHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhh
Confidence 45667778888888887554421 11223 123333332 2222233322 2455667777899999999
Q ss_pred hhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhh
Q 013453 151 LLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (442)
Q Consensus 151 ~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 193 (442)
-... +..+..+..+++||..+-.+...+..+|..+|..++-.+
T Consensus 388 y~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~ 431 (437)
T TIGR00939 388 YLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLF 431 (437)
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9888 588888889999999999999999999999988876544
No 285
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=95.38 E-value=0.0033 Score=60.90 Aligned_cols=128 Identities=16% Similarity=0.004 Sum_probs=2.4
Q ss_pred cccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhh--------------
Q 013453 313 KKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLS-------------- 378 (442)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 378 (442)
...++++++..+.|++.+..-++.++..+++..+-.|+ +|.+.+..+.++.+++.+++..-+...
T Consensus 28 tiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~-hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~ 106 (539)
T PF03137_consen 28 TIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRG-HRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGN 106 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCcceeeecHHHHHHHHHHHhccHhhcCCCccccccccccc
Confidence 35677999999999999999999999988666665444 666777777777777766554311100
Q ss_pred ------------------------------chhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHH
Q 013453 379 ------------------------------GFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGM 428 (442)
Q Consensus 379 ------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 428 (442)
....+.++++..++.+.++...++...+++-|.++++..+...|+..+..
T Consensus 107 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~ 186 (539)
T PF03137_consen 107 SSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMS 186 (539)
T ss_dssp ---------------------------------------------SSS--------------------------------
T ss_pred cccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHh
Confidence 00123455666677777888888999999999999999999999999988
Q ss_pred HHHHhhhcccCCC
Q 013453 429 SLFKAAGPAGGGA 441 (442)
Q Consensus 429 ~~g~~~gp~i~G~ 441 (442)
.+|-++|=.++|.
T Consensus 187 ~lGPa~Gf~lg~~ 199 (539)
T PF03137_consen 187 ILGPALGFLLGSF 199 (539)
T ss_dssp -------------
T ss_pred hccHHHHHHHHHH
Confidence 8888887666654
No 286
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=95.04 E-value=0.51 Score=43.66 Aligned_cols=95 Identities=18% Similarity=0.173 Sum_probs=72.1
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHH--HHHHHHHHHHHHhccchHHHHHHHHHHHHhhcchhhH-HHHH
Q 013453 82 SYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM--GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAY 158 (442)
Q Consensus 82 ~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~--~~~~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~ 158 (442)
.+-|.+-++..+..+++.+..|++..++.+..-+.+ ..++.+...++++..+|.|..+++.++.+.......+ +..-
T Consensus 285 vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~~q 364 (412)
T PF01770_consen 285 VYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIASFQ 364 (412)
T ss_pred ccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 347899999999999999999999888887544443 3445556667778899999999999988887666666 5677
Q ss_pred hhhhccccchhhhhhhhh
Q 013453 159 ACEIFREEHQALGLSTVS 176 (442)
Q Consensus 159 i~~~~~~~~r~~~~~~~~ 176 (442)
++....++.-+..+|+..
T Consensus 365 IA~~l~~e~yaLVFGiNt 382 (412)
T PF01770_consen 365 IAKNLSEERYALVFGINT 382 (412)
T ss_pred HHHhccccceeeeeeeHH
Confidence 777777777677666654
No 287
>PRK03612 spermidine synthase; Provisional
Probab=94.57 E-value=1.8 Score=42.01 Aligned_cols=143 Identities=16% Similarity=0.054 Sum_probs=64.0
Q ss_pred HHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHHHHHHH--
Q 013453 290 VYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPL-- 367 (442)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 367 (442)
..++..++...+.....-.+... +|-+....+.+.+++-.+..+|+. +++++.++..++ ...+-..+..++
T Consensus 22 ~~f~sg~~~L~yEv~~~r~l~~~-----~G~s~~~~~~ii~~fl~glalGs~-l~~~~~~~~~~~-~~~~e~~i~l~~~~ 94 (521)
T PRK03612 22 AVFVCAACGLVYELLLGTLASYL-----LGDSVTQFSTVIGLMLFAMGVGAL-LSKYLLRDAAAG-FVAVELLLALLGGL 94 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-----hCchHHHHHHHHHHHHHHHHHHHH-HHHhhhhhHHHH-HHHHHHHHHHHHHH
Confidence 33444444444444443333221 466777777777777677777766 444444332222 111111111111
Q ss_pred -HHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhcccCCC
Q 013453 368 -LTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGA 441 (442)
Q Consensus 368 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i~G~ 441 (442)
..++....... ...........+..++......|....+..+ ...++.++..|-......+|+++|+.+.|+
T Consensus 95 ~~~ll~~~~~~~-~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~-~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~ 167 (521)
T PRK03612 95 SALILYAAFAFQ-GLSRLLLYVLVLLIGLLIGMEIPLLMRILQR-IRDQHLGHNVATVLAADYLGALVGGLAFPF 167 (521)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccccchhhhhhhhHhHHhHHHHHHHHHHHH
Confidence 11111111000 0111111222222233333444554444433 222235667777788888888888877664
No 288
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=94.54 E-value=0.0057 Score=51.41 Aligned_cols=68 Identities=16% Similarity=0.280 Sum_probs=50.3
Q ss_pred hHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhh---------hcccCCc
Q 013453 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLV---------ADRYGRK 112 (442)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l---------~dr~Grr 112 (442)
..+....+.+++-+..++....+-.+.++.+.++.. ...++-...+.-++..++.|.. .||+|||
T Consensus 18 svf~yGvGHmlNDitAScWFTYlllfltqiglsp~~------~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~ 91 (412)
T KOG4830|consen 18 SVFAYGVGHMLNDITASCWFTYLLLFLTQIGLSPSS------RAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRR 91 (412)
T ss_pred eeeeechhHHHhhHHHHHHHHHHHHHHHHhcCCcch------hHHHHHhhHHHHHHhcccccccccccccHHHhhhhcce
Confidence 344455566667666677777777788899999988 7777777777888888877644 4699998
Q ss_pred hhh
Q 013453 113 PVI 115 (442)
Q Consensus 113 ~~~ 115 (442)
+..
T Consensus 92 ~~w 94 (412)
T KOG4830|consen 92 MSW 94 (412)
T ss_pred eee
Confidence 865
No 289
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=94.54 E-value=0.93 Score=40.14 Aligned_cols=113 Identities=19% Similarity=0.065 Sum_probs=68.6
Q ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHH
Q 013453 323 QMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIIT 402 (442)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (442)
...+.......+...++.. ..+.+.|+.|||+....+............+... .............+.......+
T Consensus 39 ~~~~~~~~~~~~~~~~~~~-~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~ 113 (338)
T COG0477 39 LLYGLLLSAFFLGYAIGSL-LAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPN----VGLALLLILRLLQGLGGGGLLP 113 (338)
T ss_pred HHHHHHHHHHHHHHHHHhh-hhhhccccccchHHHHHHHHHHHHHHHHHHhCcc----chHHHHHHHHHHHHhhhHHHHH
Confidence 4667777777777777775 5666666668886666665442333222222221 1111122222223344446677
Q ss_pred hhhhhhcccCCh-hhhhHHHHHHHH-HHHHHHhhhcccCC
Q 013453 403 GLFILQNRAVDQ-DQRGAANGIAMT-GMSLFKAAGPAGGG 440 (442)
Q Consensus 403 ~~~~~~~~~~~~-~~~g~~~g~~~~-~~~~g~~~gp~i~G 440 (442)
....+..+..|+ +.|+...+.... ....|..++|.+++
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (338)
T COG0477 114 VASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAG 153 (338)
T ss_pred HHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 788888888887 678998888888 57777777775543
No 290
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=93.87 E-value=0.02 Score=51.51 Aligned_cols=106 Identities=20% Similarity=0.124 Sum_probs=2.2
Q ss_pred HHHHHHHHHHHhhhhhhhhhhcc-cCCchhhHHHHHHHHH---HHHHHh----------ccchHHHHHHHHHHHHhhcch
Q 013453 86 YVGSSFMFGRALTSVFWGLVADR-YGRKPVIIMGTASVVI---FNTLFG----------LSVNFWMAVLTRFLLGSLNGL 151 (442)
Q Consensus 86 ~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~~~~~~~~~~i---~~~~~~----------~a~~~~~l~~~r~l~G~~~g~ 151 (442)
.....+.++-.+|..+.++.-=+ -.+|++.. ..+.-.+ ..++|. +-+|-+..++.-++.|+..|-
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~-~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGy 264 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWI-LSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGY 264 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHH-HHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccch
Confidence 34567888888888877663211 13444443 3222222 222221 123446677778899999999
Q ss_pred hhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhh
Q 013453 152 LGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGF 192 (442)
Q Consensus 152 ~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 192 (442)
... +..+..+..++++|..+-.+...+..+|..+|..++-.
T Consensus 265 l~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 265 LSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp --HHHH------------------------------------
T ss_pred hhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888 58888999999999988888888888888888776543
No 291
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=93.17 E-value=1.8 Score=39.84 Aligned_cols=110 Identities=19% Similarity=0.110 Sum_probs=76.5
Q ss_pred hHHHHHHHH-HHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHh---------ccchHHHHHHHHHHHHhhcch
Q 013453 82 SYAGYVGSS-FMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFG---------LSVNFWMAVLTRFLLGSLNGL 151 (442)
Q Consensus 82 ~~~g~~~s~-~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~---------~a~~~~~l~~~r~l~G~~~g~ 151 (442)
++.-.+..+ +.+.-.+|.+.+.++-++ +||+..+.. ++-.+..-++. +-.+-++++..-.+.|+..|-
T Consensus 282 ~y~~~~~~l~fN~~d~vG~~~a~~~~~~-~~r~l~i~v-~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGY 359 (406)
T KOG1479|consen 282 WYALLLVFLSFNVFDLIGSILAALLTWP-DPRKLTIPV-LLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGY 359 (406)
T ss_pred hhHHHHHHHHhHHHHHhhhhhhhcccCC-CCceehHHH-HHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccch
Confidence 335566666 888888887777776555 344443333 33222222222 234667788888999999999
Q ss_pred hhHH-HHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhh
Q 013453 152 LGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (442)
Q Consensus 152 ~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 193 (442)
...+ ..+..+..+++++..+-.+.......|...|..++...
T Consensus 360 ltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s~l~ 402 (406)
T KOG1479|consen 360 LTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLSWVF 402 (406)
T ss_pred HhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 8885 88889999999988888888888888888887776443
No 292
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=90.67 E-value=0.86 Score=42.38 Aligned_cols=124 Identities=16% Similarity=0.027 Sum_probs=75.8
Q ss_pred cccCChhHHHHHHHHHHHHHHHHHhhHHHHHHH---hhchhHH-HHHHHHHHHHHHHHHHHHHHhh-----chh-----h
Q 013453 317 GLNYSTQMVGEVLAITGFSLLVFQLSLYPFLER---ILGPIMV-ARIAGVLTIPLLTSYPYIAMLS-----GFG-----L 382 (442)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----~~~-----~ 382 (442)
..|.+....+.+....-+.+++.+++++...|| |+||||. +..+.....+.+.++++..... +.. .
T Consensus 61 ~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~r 140 (498)
T KOG0637|consen 61 SLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPR 140 (498)
T ss_pred HcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchH
Confidence 368888888888888888888888855554443 4566654 4445555556666666654322 111 1
Q ss_pred HHHHHHHHHH-HHHHHHHHHHhhhhhhcccCChhhhhH-HHHHHHHHHHHHHhhhcccCC
Q 013453 383 AFLLNCASVV-KNLLSVSIITGLFILQNRAVDQDQRGA-ANGIAMTGMSLFKAAGPAGGG 440 (442)
Q Consensus 383 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~g~~~~~~~~g~~~gp~i~G 440 (442)
.+.+.++++. .=+.........-++..++..++++-+ +++....+..+|+.+|=...+
T Consensus 141 ai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 141 AIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGS 200 (498)
T ss_pred HHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccc
Confidence 1222222221 222333445556777778776666666 999999999999888765544
No 293
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=87.08 E-value=3.1 Score=36.76 Aligned_cols=106 Identities=11% Similarity=0.121 Sum_probs=73.2
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhcccCC-chh-----hHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhcchhhH-HH
Q 013453 84 AGYVGSSFMFGRALTSVFWGLVADRYGR-KPV-----IIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IK 156 (442)
Q Consensus 84 ~g~~~s~~~~~~~~~~~~~G~l~dr~Gr-r~~-----~~~~~~~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~ 156 (442)
.-|....|.+|-.+.. =+-|+=+ +.. +..-.+++.+...+..+.++++..++.-+.-|+-+|..++ ..
T Consensus 290 YRwyqvlYQlGVFiSR-----SS~~~~~~p~l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf 364 (409)
T KOG3880|consen 290 YRWYQVLYQLGVFISR-----SSINLFTMPYLWLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTF 364 (409)
T ss_pred chhhheeeeeeEEEEe-----ccceEEechHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHH
Confidence 6788888876643322 1112211 111 1222345555666777899999999999999996666666 56
Q ss_pred HHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhc
Q 013453 157 AYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (442)
Q Consensus 157 ~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 194 (442)
--+.+..++++|-.+++....+-++|..++..++-.+-
T Consensus 365 ~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalplh 402 (409)
T KOG3880|consen 365 HNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPLH 402 (409)
T ss_pred HHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccch
Confidence 66777778899999999999999999998887765543
No 294
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=84.48 E-value=3.2 Score=35.65 Aligned_cols=102 Identities=20% Similarity=0.202 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhcc-cCCchhhH----HHHHHHHHHHHHHhc-c----chHHHHHHHHHHHHhhcchhh
Q 013453 84 AGYVGSSFMFGRALTSVFWGLVADR-YGRKPVII----MGTASVVIFNTLFGL-S----VNFWMAVLTRFLLGSLNGLLG 153 (442)
Q Consensus 84 ~g~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~~~----~~~~~~~i~~~~~~~-a----~~~~~l~~~r~l~G~~~g~~~ 153 (442)
.....-++..|..+|.+..|++... +.||+-+. .+.+++.+..+..+. . .++..+++.-++.|++.=...
T Consensus 143 ~~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ 222 (267)
T PF07672_consen 143 IPIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQ 222 (267)
T ss_pred hHHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhh
Confidence 4555667777777888888888764 45555443 223344443333211 1 246667777888887632333
Q ss_pred HHHHHhhhhccccchhhhhhhhhHhhhhHHHH
Q 013453 154 PIKAYACEIFREEHQALGLSTVSTAWGIGLII 185 (442)
Q Consensus 154 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 185 (442)
++.-.+...++..++.+.--.++..+++|.++
T Consensus 223 ~ViL~lPhEyK~~~pk~ig~~Fg~iWGfGY~~ 254 (267)
T PF07672_consen 223 GVILNLPHEYKGYNPKKIGIQFGLIWGFGYIF 254 (267)
T ss_pred HHHhcChhhhcCCCcceehhHHHHHHHHHHHH
Confidence 33444555555555544444556666666654
No 295
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=81.52 E-value=19 Score=33.18 Aligned_cols=149 Identities=10% Similarity=0.019 Sum_probs=69.4
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHhcCCcccCcccCChhHHHHHHHH--HHHHHHHHHhhHHHHHHHhhchhHHHHH-
Q 013453 283 PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAI--TGFSLLVFQLSLYPFLERILGPIMVARI- 359 (442)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 359 (442)
++..++..+.+.... .+.....|..+.. -|.|-++.+..... ....-++-++++-..-.||+|||+...+
T Consensus 32 ~illLl~LYllQGiP-~GL~~~iP~lL~a------k~vSyt~~a~fS~ay~P~sLKllWaPiVDs~y~k~~GrrksWvvp 104 (510)
T KOG3574|consen 32 SILLLLFLYLLQGIP-LGLIGAIPLLLQA------KGVSYTSQAIFSFAYWPFSLKLLWAPIVDSVYSKRFGRRKSWVVP 104 (510)
T ss_pred hHHHHHHHHHHcCCc-hhHhhhhHHHhcC------CCcchhhhhhhhhhhhHHHHHHHHHhhhHHHHHHhhccccceeee
Confidence 344444444443332 3333456665543 34454444433221 1222333344355555678888775443
Q ss_pred HHHHHHHHHHHHHHHHHhh-----chhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhh
Q 013453 360 AGVLTIPLLTSYPYIAMLS-----GFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAA 434 (442)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~ 434 (442)
+..+.+..+.++.+..+.. ..+.........+...+.....-.....+.-....+++.|-++.........|.++
T Consensus 105 ~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL 184 (510)
T KOG3574|consen 105 CQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFL 184 (510)
T ss_pred hHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHh
Confidence 3333344444443322211 01111111112222222332333344555556677888888887777777777777
Q ss_pred hccc
Q 013453 435 GPAG 438 (442)
Q Consensus 435 gp~i 438 (442)
+-.+
T Consensus 185 ~~~i 188 (510)
T KOG3574|consen 185 GNVV 188 (510)
T ss_pred hcce
Confidence 6543
No 296
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=80.22 E-value=1.2 Score=44.51 Aligned_cols=126 Identities=14% Similarity=-0.045 Sum_probs=91.5
Q ss_pred ccCcccCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhh---------------
Q 013453 314 KLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLS--------------- 378 (442)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 378 (442)
..++++++..+.|++...+-++..+...++..+- .|..|.+++.++.++.+++.++..+-+...
T Consensus 123 iErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG-~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~ 201 (735)
T KOG3626|consen 123 IERRFKISSSQSGLIASSYDIGNLLLIIFVSYFG-SRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVE 201 (735)
T ss_pred hhhhcCCCCCcceeEeeecccchhhhhHhHHHhc-cccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhcccc
Confidence 4566899999999998888888888877555544 444677777777777777766654421100
Q ss_pred -------------------------------chhhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChhhhhHHHHHHHHH
Q 013453 379 -------------------------------GFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTG 427 (442)
Q Consensus 379 -------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 427 (442)
+...|+++++..++.|.+....++...+++-|.+.+++.....|+..++
T Consensus 202 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~ 281 (735)
T KOG3626|consen 202 NPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSM 281 (735)
T ss_pred CCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHH
Confidence 0114566677777777777778888889999999999999999999988
Q ss_pred HHHHHhhhcccCC
Q 013453 428 MSLFKAAGPAGGG 440 (442)
Q Consensus 428 ~~~g~~~gp~i~G 440 (442)
..+|-++|=.+++
T Consensus 282 ~~lGPaiGfllgS 294 (735)
T KOG3626|consen 282 AILGPAIGFLLGS 294 (735)
T ss_pred HHhhhHHHHHHHH
Confidence 8887777755544
No 297
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=79.11 E-value=64 Score=31.23 Aligned_cols=117 Identities=8% Similarity=0.004 Sum_probs=66.4
Q ss_pred ChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHh-----hchh--------------
Q 013453 321 STQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAML-----SGFG-------------- 381 (442)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-------------- 381 (442)
+++....+=...-+...+.-..+..++.++.++.++..+........+.++++...+ +...
T Consensus 56 gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~ 135 (491)
T PF03219_consen 56 GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFK 135 (491)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHH
Confidence 555555544333332223223356667778888887766555555554444443211 1000
Q ss_pred -------hHHHHHHHHHHHHHHHHHHHH-hhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhccc
Q 013453 382 -------LAFLLNCASVVKNLLSVSIIT-GLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAG 438 (442)
Q Consensus 382 -------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i 438 (442)
.|.. .+..+..-..+....+ ..+.+++|..+.++..+..++.....++|.++++.+
T Consensus 136 ~~i~~~~~Wt~-slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~ 199 (491)
T PF03219_consen 136 GFIAMFRNWTF-SLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQL 199 (491)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111 1111111222333333 568999999999999999999999999999887654
No 298
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=77.00 E-value=15 Score=28.70 Aligned_cols=40 Identities=8% Similarity=0.076 Sum_probs=31.5
Q ss_pred HHHHHHHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhh
Q 013453 395 LLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAA 434 (442)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~ 434 (442)
+++.+...+.|.+++-.-++++.|+..|+-.+-.+++...
T Consensus 106 ~Fg~gllGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 106 FFGLGLLGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred HHHHHHHhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 4455666777888888889999999999998888877654
No 299
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=76.82 E-value=17 Score=31.65 Aligned_cols=98 Identities=17% Similarity=0.130 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhcccCCc--hhhHHHHHHHHHHHHHHhc----cc---hHHHHHHHHHHHHhhcchhhH
Q 013453 84 AGYVGSSFMFGRALTSVFWGLVADRYGRK--PVIIMGTASVVIFNTLFGL----SV---NFWMAVLTRFLLGSLNGLLGP 154 (442)
Q Consensus 84 ~g~~~s~~~~~~~~~~~~~G~l~dr~Grr--~~~~~~~~~~~i~~~~~~~----a~---~~~~l~~~r~l~G~~~g~~~~ 154 (442)
-|.+.+.++++.++|+-+..++..|-..| ..+.+..+...+...+..+ +| +...-+++..+.-.+.|.++|
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP 363 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP 363 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence 79999999999999999998888876554 3444444444433333222 22 222335555566667889999
Q ss_pred H-HHHhhhhccccchhhhhhhhhHhhhh
Q 013453 155 I-KAYACEIFREEHQALGLSTVSTAWGI 181 (442)
Q Consensus 155 ~-~~~i~~~~~~~~r~~~~~~~~~~~~~ 181 (442)
. ..+=.+..|+++|...+.++..-.++
T Consensus 364 SimkmRsqyIPEearstimNfFRvPLni 391 (454)
T KOG4332|consen 364 SIMKMRSQYIPEEARSTIMNFFRVPLNI 391 (454)
T ss_pred HHHHHHHhhCCHHHHhhhhhheechhhH
Confidence 5 77778888999999988877654443
No 300
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=72.92 E-value=37 Score=31.00 Aligned_cols=94 Identities=12% Similarity=0.089 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHH--HHHHHHHHHHHhccchHHHHHHHHHHHHhhcchhhH-HHHHhh
Q 013453 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG--TASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYAC 160 (442)
Q Consensus 84 ~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~--~~~~~i~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~ 160 (442)
-|..-++..+..+++.+..|.+.-++.|..-++++ .+.-+...++++-+.+.|..+++.++...-.....+ +..-++
T Consensus 273 NG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA 352 (433)
T KOG3810|consen 273 NGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIA 352 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHH
Confidence 56777778888899999999999988887444444 344444445666678899999998888887777666 578888
Q ss_pred hhccccchhhhhhhhhH
Q 013453 161 EIFREEHQALGLSTVST 177 (442)
Q Consensus 161 ~~~~~~~r~~~~~~~~~ 177 (442)
+....+.-|..+|+...
T Consensus 353 ~nL~~e~~gLvFGiNTF 369 (433)
T KOG3810|consen 353 RNLSSELFGLVFGINTF 369 (433)
T ss_pred HhhhhhhheeeeehHHH
Confidence 88888877777776543
No 301
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=71.56 E-value=27 Score=25.10 Aligned_cols=28 Identities=7% Similarity=0.048 Sum_probs=17.3
Q ss_pred hHHHHHHHhhchhHHHHHHHHHHHHHHH
Q 013453 342 SLYPFLERILGPIMVARIAGVLTIPLLT 369 (442)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (442)
+++.|+|++++......+.+++.+++..
T Consensus 61 ~lG~WLD~~~~t~~~~tl~~lllGv~~G 88 (100)
T TIGR02230 61 AVGIWLDRHYPSPFSWTLTMLIVGVVIG 88 (100)
T ss_pred HHHHHHHhhcCCCcHHHHHHHHHHHHHH
Confidence 3888999998865544444444444433
No 302
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=71.11 E-value=16 Score=26.31 Aligned_cols=25 Identities=20% Similarity=0.238 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhccc
Q 013453 85 GYVGSSFMFGRALTSVFWGLVADRY 109 (442)
Q Consensus 85 g~~~s~~~~~~~~~~~~~G~l~dr~ 109 (442)
..-.+.=+++..+.....||+.|||
T Consensus 45 a~klssefIsGilVGa~iG~llD~~ 69 (116)
T COG5336 45 AFKLSSEFISGILVGAGIGWLLDKF 69 (116)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444555666677777889999996
No 303
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=67.60 E-value=72 Score=26.64 Aligned_cols=35 Identities=23% Similarity=0.303 Sum_probs=19.8
Q ss_pred hhccccchhhhhhhhhHhhhhHHHHHHHhhhhhcc
Q 013453 161 EIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 161 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (442)
|...+++|.+.-.......-++..+|..+++.+.+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~i~~f~~Ga~~ga~l~~ 187 (209)
T PF06912_consen 153 RYLRGKDRALRRALRYLLIILSFFIGAILGALLYR 187 (209)
T ss_pred HHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334444333444555556667777777777776
No 304
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=63.70 E-value=61 Score=30.72 Aligned_cols=123 Identities=13% Similarity=0.126 Sum_probs=75.8
Q ss_pred ChhhHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHH
Q 013453 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (442)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~ 118 (442)
+..+.....+-.++..++.....|.+ +..++|++.++ ...+.+.-.+...++.++--....+.|-|-....+
T Consensus 14 ~~~~~~~lglQH~lamfg~~V~VPli--vg~a~~l~~~~------~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG 85 (451)
T COG2233 14 PLGKLLLLGLQHLLAMFGATVLVPLL--VGLALGLSAED------TAYLISADLLASGIGTLLQLLGTGPGGSGLPSYLG 85 (451)
T ss_pred ChHHHHHHHHHHHHHHHhcchHhhHH--hccCCCCCHHH------HHHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEe
Confidence 44555666666666666654444432 34678999888 89999999999999998876644456666665555
Q ss_pred HHHHHHHHHHHhcc---chHHHHHHHHHHHHhhcchhhHHHH-Hhhhhccccchh
Q 013453 119 TASVVIFNTLFGLS---VNFWMAVLTRFLLGSLNGLLGPIKA-YACEIFREEHQA 169 (442)
Q Consensus 119 ~~~~~i~~~~~~~a---~~~~~l~~~r~l~G~~~g~~~~~~~-~i~~~~~~~~r~ 169 (442)
.-...++....... ......+.+-+..|+..-...+... .+...+||---|
T Consensus 86 ~sFafi~p~i~~~~~~g~~~~~~~G~ii~ag~~~~li~~~~~~~l~rlfPPvVtG 140 (451)
T COG2233 86 SSFAFVAPMIAIGGTTGDGIAALLGGIIAAGLVYFLISPIVKIRLARLFPPVVTG 140 (451)
T ss_pred chHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCceEE
Confidence 55555555444333 2355566666666665555555433 666666664433
No 305
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=63.61 E-value=21 Score=33.05 Aligned_cols=87 Identities=9% Similarity=-0.040 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhch---hhHHHHHHHHHHHHHHHHHHHHhhhhhhcccCChh---hhhHHHHHHHHHH
Q 013453 355 MVARIAGVLTIPLLTSYPYIAMLSGF---GLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQD---QRGAANGIAMTGM 428 (442)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~g~~~~~~ 428 (442)
+.+.++.++..++.+++......... .....+++...+...+..+.=+....+..+.++++ +|.+....+....
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 45566777777777665554433221 01111222222233344455577777777777554 6777888889999
Q ss_pred HHHHhhhcccCCC
Q 013453 429 SLFKAAGPAGGGA 441 (442)
Q Consensus 429 ~~g~~~gp~i~G~ 441 (442)
++|..+++.+.++
T Consensus 82 n~G~~~~~~~~~~ 94 (372)
T PF00854_consen 82 NIGSLFSPTLVPY 94 (372)
T ss_dssp HHHHHHHHHCCCH
T ss_pred hhhhHhhcccchh
Confidence 9999999887764
No 306
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=61.21 E-value=1.6e+02 Score=28.50 Aligned_cols=55 Identities=13% Similarity=0.075 Sum_probs=42.4
Q ss_pred HHHHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhcc
Q 013453 141 TRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 141 ~r~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (442)
.-++.-+..-...+ ..++-+.+.+|..=|+.|.+.+...++|.-.-..+.-++.+
T Consensus 411 ~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD 466 (544)
T PF13000_consen 411 QHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVD 466 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhh
Confidence 33555555444455 58888999999999999999999999998877777767766
No 307
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=61.21 E-value=1.3e+02 Score=29.82 Aligned_cols=63 Identities=10% Similarity=0.048 Sum_probs=55.2
Q ss_pred hHHHHHHHHHHHHhhcchhhHH-HHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhccc
Q 013453 134 NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (442)
Q Consensus 134 ~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 196 (442)
|.++++--.++.|++.....+. .-+.-+.+|++.|+.+.+++....++|..+...+.......
T Consensus 457 Si~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~t~a~G~~lss~Lv~~v~~~ 520 (571)
T KOG1237|consen 457 SILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLLTVAVGNYLSSVLVSLVQFS 520 (571)
T ss_pred eHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5678888889999999998884 77788889999999999999999999999999988877653
No 308
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=59.37 E-value=46 Score=24.14 Aligned_cols=50 Identities=16% Similarity=0.167 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhccc
Q 013453 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSV 133 (442)
Q Consensus 84 ~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a~ 133 (442)
.|-+.++|.-.+.+.++++++..|+.-+.+-=.++..+..++..+..+.|
T Consensus 56 fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P 105 (107)
T PF02694_consen 56 FGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP 105 (107)
T ss_pred chhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence 78999999999999999999999999888777777777777776655543
No 309
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=55.99 E-value=1.4e+02 Score=25.99 Aligned_cols=17 Identities=6% Similarity=-0.074 Sum_probs=7.3
Q ss_pred HHHHHHHHHHHHhhccc
Q 013453 222 ISLFAFGVTIAAFWLPE 238 (442)
Q Consensus 222 ~~~~~~~~~~~~~~~~e 238 (442)
..++.++....+.+++.
T Consensus 121 G~~l~~~~~~~f~fik~ 137 (254)
T PF07857_consen 121 GVALVLVSGIIFSFIKS 137 (254)
T ss_pred HHHHHHHHHHheeeecC
Confidence 33344444444444443
No 310
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=55.74 E-value=1.5e+02 Score=26.35 Aligned_cols=57 Identities=25% Similarity=0.337 Sum_probs=39.2
Q ss_pred HHHHHHHHHhhcchhhHHHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhc
Q 013453 138 AVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (442)
Q Consensus 138 l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 194 (442)
.-..|.+.|+-.=.+.|.++++.-.+|++++--..--...+.+++.++-|++|-.+.
T Consensus 22 ~~~lr~~~g~~~vlf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l~ 78 (287)
T PF07760_consen 22 IPPLRVILGFPFVLFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLLN 78 (287)
T ss_pred hhHHHHHHHHHHHHHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 556788888877777888999999999665544444445555555666666665554
No 311
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=55.20 E-value=33 Score=26.91 Aligned_cols=51 Identities=14% Similarity=0.076 Sum_probs=34.6
Q ss_pred chHHHHHHHHHHHHhhcchhhHHHHHhhhhccccchhhhhhhhhHhhhhHHHH
Q 013453 133 VNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLII 185 (442)
Q Consensus 133 ~~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 185 (442)
+++..+++.-++.|+| .....+..++..+++++.|..+|+-.+-.+++-+.
T Consensus 95 P~~~~~~~S~~~Fg~g--llGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 95 PPWAVLLVSLVFFGLG--LLGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred CchHHHHHHHHHHHHH--HHhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 4555555555555543 33335667777888888999999988888876554
No 312
>PRK02237 hypothetical protein; Provisional
Probab=53.53 E-value=43 Score=24.32 Aligned_cols=50 Identities=16% Similarity=0.075 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhccc
Q 013453 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSV 133 (442)
Q Consensus 84 ~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a~ 133 (442)
.|-+.++|.-.+.+.++++++..|+.-+-+-=.++..+..++..+..+.|
T Consensus 58 ~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 58 FGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred hhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 78899999999999999999999999877777777777777766554443
No 313
>PTZ00101 rhomboid-1 protease; Provisional
Probab=48.48 E-value=1.9e+02 Score=25.57 Aligned_cols=39 Identities=21% Similarity=0.244 Sum_probs=24.4
Q ss_pred HHHHHhhhhhhhhhhcc-cCCchhhHHHHHHHHHHHHHHh
Q 013453 92 MFGRALTSVFWGLVADR-YGRKPVIIMGTASVVIFNTLFG 130 (442)
Q Consensus 92 ~~~~~~~~~~~G~l~dr-~Grr~~~~~~~~~~~i~~~~~~ 130 (442)
.+..+......|...+| +|++|..++=.+....++++.+
T Consensus 118 Ll~Nm~~l~~~G~~lE~~~G~~r~~ilYl~sGi~G~l~s~ 157 (278)
T PTZ00101 118 TFFNVFFQLRMGFTLEKNYGIVKIIILYFLTGIYGNILSS 157 (278)
T ss_pred HHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHHHHHHH
Confidence 34555666677776665 8998887555555555555443
No 314
>COG1971 Predicted membrane protein [Function unknown]
Probab=47.55 E-value=1.6e+02 Score=24.19 Aligned_cols=27 Identities=15% Similarity=-0.076 Sum_probs=17.2
Q ss_pred HHHHHHHhhchhHHHHHHHHHHHHHHH
Q 013453 343 LYPFLERILGPIMVARIAGVLTIPLLT 369 (442)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (442)
+++.+.+.++.+..+..+.++..++.-
T Consensus 156 IG~~~g~~~g~~ae~lgGiiLI~~G~~ 182 (190)
T COG1971 156 IGRKLGKFLGKYAEILGGIILIGIGVK 182 (190)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 566666666777777666666555543
No 315
>PRK11469 hypothetical protein; Provisional
Probab=46.92 E-value=1.6e+02 Score=24.18 Aligned_cols=51 Identities=10% Similarity=-0.000 Sum_probs=28.3
Q ss_pred cCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHHHHHHHHH
Q 013453 319 NYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLT 369 (442)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (442)
+.+.........+...........+++++.++.+++....-+.++..+++-
T Consensus 130 g~~~~~~~~~ig~~s~~~~~~G~~lG~~~g~~~g~~a~~lgG~iLI~iGi~ 180 (188)
T PRK11469 130 QVNIIATALAIGCATLIMSTLGMMVGRFIGSIIGKKAEILGGLVLIGIGVQ 180 (188)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444445554445555554554677777777776665555555555443
No 316
>COG3162 Predicted membrane protein [Function unknown]
Probab=46.40 E-value=1.1e+02 Score=21.91 Aligned_cols=40 Identities=10% Similarity=0.208 Sum_probs=27.1
Q ss_pred ccccccccch--hHHHHHHHHHHHHHHhhHHHHHHHHhcCCc
Q 013453 274 PKKSLLKNWP--LMSSIIVYCVFSLHDMAYSEIFSLWANSPK 313 (442)
Q Consensus 274 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (442)
.++++.++++ .|...+.++.+.+.+....++.+-|+..|.
T Consensus 14 ~f~eLv~kr~~Fa~~ltl~flv~Y~~filLiaf~~~~l~tp~ 55 (102)
T COG3162 14 RFRELVRKRRRFAVPLTLIFLVVYFGFILLIAFAPGWLATPL 55 (102)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHhcCcc
Confidence 4455555544 455666777777777777888888887764
No 317
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=45.44 E-value=61 Score=26.45 Aligned_cols=25 Identities=16% Similarity=0.533 Sum_probs=20.4
Q ss_pred HHHHHHHHHhhhhhhhhhhcccCCc
Q 013453 88 GSSFMFGRALTSVFWGLVADRYGRK 112 (442)
Q Consensus 88 ~s~~~~~~~~~~~~~G~l~dr~Grr 112 (442)
+..|.+++.+...+.|++.||.-+|
T Consensus 88 TgGyL~gfi~aa~l~G~l~~k~~~~ 112 (184)
T COG1268 88 TGGYLIGFIIAAFLIGLLAEKIRKR 112 (184)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhcc
Confidence 3557788899999999999998753
No 318
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=42.30 E-value=2.4e+02 Score=25.82 Aligned_cols=22 Identities=23% Similarity=0.132 Sum_probs=15.5
Q ss_pred HHHHhhchhHHHHHHHHHHHHH
Q 013453 346 FLERILGPIMVARIAGVLTIPL 367 (442)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~ 367 (442)
.+.|++|-|+.+.++.......
T Consensus 80 ~~Ir~~g~K~tm~lav~~Y~ly 101 (390)
T KOG3097|consen 80 LLIRFLGTKWTMVLAVFPYALY 101 (390)
T ss_pred HHHHHHhhHHHHHHHHHHHHHH
Confidence 6778889988877765554443
No 319
>COG2119 Predicted membrane protein [Function unknown]
Probab=41.98 E-value=1.9e+02 Score=23.58 Aligned_cols=80 Identities=13% Similarity=0.202 Sum_probs=45.3
Q ss_pred hhHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHH
Q 013453 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (442)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~ 120 (442)
..+...+...|+.-++.-... ..-.+..+.+..... +.|- .....+...++.+.+.++++|+..|++-.++.+
T Consensus 100 ~~f~~tfi~~FlaE~GDKTQi-ATIaLaA~~~~~~~V-----~~Gt-~lg~~l~s~laVl~G~~ia~ki~~r~l~~~aal 172 (190)
T COG2119 100 GVFVTTFITFFLAELGDKTQI-ATIALAADYHSPWAV-----FAGT-TLGMILASVLAVLLGKLIAGKLPERLLRFIAAL 172 (190)
T ss_pred cHHHHHHHHHHHHHhccHHHH-HHHHHhhcCCCceee-----ehhh-HHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHH
Confidence 344445555555544432221 122344455542221 0332 233456677888888999999999999888777
Q ss_pred HHHHHHH
Q 013453 121 SVVIFNT 127 (442)
Q Consensus 121 ~~~i~~~ 127 (442)
++.+..+
T Consensus 173 lFl~fal 179 (190)
T COG2119 173 LFLIFAL 179 (190)
T ss_pred HHHHHHH
Confidence 6665553
No 320
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=41.62 E-value=2.9e+02 Score=25.62 Aligned_cols=20 Identities=15% Similarity=0.227 Sum_probs=10.4
Q ss_pred hhHhhhhHHHHHHHhhhhhc
Q 013453 175 VSTAWGIGLIIGPALGGFLA 194 (442)
Q Consensus 175 ~~~~~~~g~~~g~~~~~~l~ 194 (442)
.....+.|.+--|++.....
T Consensus 100 ~~~~~N~~~lglpi~~~l~g 119 (385)
T PF03547_consen 100 AASFGNTGFLGLPILQALFG 119 (385)
T ss_pred cccCCcchhhHHHHHHHHhc
Confidence 33455666655555554443
No 321
>TIGR03644 marine_trans_1 probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.
Probab=39.93 E-value=3.3e+02 Score=25.71 Aligned_cols=47 Identities=15% Similarity=0.208 Sum_probs=27.6
Q ss_pred HHHHhhcchhhHH-HHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhh
Q 013453 143 FLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG 190 (442)
Q Consensus 143 ~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 190 (442)
++.|+-.|..... ..+ .|..+-++---+......+...|.+..++++
T Consensus 297 ~iiG~iag~v~~~~~~~-~~~~~iDD~~~~~~vHg~~Gi~G~i~~glf~ 344 (404)
T TIGR03644 297 TLIGAVGGVIVVFSIVL-LDKLKIDDPVGAISVHGVAGIWGTLVVPITN 344 (404)
T ss_pred HHHHHHHHHHHHHHHHH-HHhCCCCCCcCchHhhhHHHHHHHHHHHHhc
Confidence 3445544444442 333 3556666666677787777777776666654
No 322
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=39.71 E-value=89 Score=24.50 Aligned_cols=41 Identities=17% Similarity=0.350 Sum_probs=27.3
Q ss_pred HHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHH
Q 013453 89 SSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLF 129 (442)
Q Consensus 89 s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~ 129 (442)
..|.+++.+...+.|++.+|..+++..........++.+.+
T Consensus 60 gGyl~gf~~~a~i~g~~~~~~~~~~~~~~~~~~~~~g~~ii 100 (148)
T PF02632_consen 60 GGYLLGFPLAALIIGLLAERLKRSRSFLRLILAMLVGLLII 100 (148)
T ss_pred ChHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHH
Confidence 46778888999999999999888753333333333343333
No 323
>PF11085 YqhR: Conserved membrane protein YqhR; InterPro: IPR024563 This family of proteins is conserved in the Bacillaceae family of the Firmicutes. Their function is not known.
Probab=39.32 E-value=2e+02 Score=23.08 Aligned_cols=47 Identities=21% Similarity=0.218 Sum_probs=19.5
Q ss_pred CChhHHHHHHHH--HHHHHHHHHhhHHHHHHHh-hchhHHHHHHHHHHHHH
Q 013453 320 YSTQMVGEVLAI--TGFSLLVFQLSLYPFLERI-LGPIMVARIAGVLTIPL 367 (442)
Q Consensus 320 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 367 (442)
+..+..|.+.++ .++..+++++ +-..+-+| .+.-.=+..+.+.-++.
T Consensus 63 wk~t~~G~~igi~~~gv~Si~aAl-lY~~~l~k~~g~W~Gi~YG~~~W~iv 112 (173)
T PF11085_consen 63 WKNTWLGNLIGIVFIGVFSIVAAL-LYYALLKKFKGPWPGILYGLAWWAIV 112 (173)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcccchHHHHHHHHHHHH
Confidence 334445554433 3444555555 33333333 33333333343333333
No 324
>PRK11469 hypothetical protein; Provisional
Probab=38.57 E-value=1.4e+02 Score=24.51 Aligned_cols=76 Identities=14% Similarity=0.074 Sum_probs=40.7
Q ss_pred ChhhHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHH-hhhhhhhhhhcccCCchhhHH
Q 013453 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRA-LTSVFWGLVADRYGRKPVIIM 117 (442)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~-~~~~~~G~l~dr~Grr~~~~~ 117 (442)
..+..+.+.++.-++.+..+.-... .+.+.-. ......+..+... .+..++.++.+++|+|.-++-
T Consensus 104 ~~~~~l~LaiAtSiDAlavGi~~~~-------~g~~~~~------~~~~ig~~s~~~~~~G~~lG~~~g~~~g~~a~~lg 170 (188)
T PRK11469 104 GFWLLVTTAIATSLDAMAVGVGLAF-------LQVNIIA------TALAIGCATLIMSTLGMMVGRFIGSIIGKKAEILG 170 (188)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHH-------hhhhHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666666666666654443322 1223222 3333333333333 333345556677888888887
Q ss_pred HHHHHHHHHH
Q 013453 118 GTASVVIFNT 127 (442)
Q Consensus 118 ~~~~~~i~~~ 127 (442)
+.++..++.-
T Consensus 171 G~iLI~iGi~ 180 (188)
T PRK11469 171 GLVLIGIGVQ 180 (188)
T ss_pred HHHHHHHHHH
Confidence 8877777653
No 325
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=37.05 E-value=1e+02 Score=19.07 Aligned_cols=31 Identities=16% Similarity=0.165 Sum_probs=18.6
Q ss_pred HHHHhhHHHHHHHhhchhHHHHHHHHHHHHH
Q 013453 337 LVFQLSLYPFLERILGPIMVARIAGVLTIPL 367 (442)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (442)
++....++.++|++++..+...+...+..+.
T Consensus 14 i~~g~~~G~~lD~~~~t~p~~~~~g~llG~~ 44 (55)
T PF09527_consen 14 ILVGFFLGYWLDKWFGTSPWFTLIGLLLGIA 44 (55)
T ss_pred HHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 3334448889999988855554444443333
No 326
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=35.04 E-value=1.5e+02 Score=28.11 Aligned_cols=26 Identities=12% Similarity=0.074 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHhhHHHHHHHhhchhH
Q 013453 330 AITGFSLLVFQLSLYPFLERILGPIM 355 (442)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (442)
.+.++...+.+...+..-.+..||++
T Consensus 334 ~vYAlTs~i~GY~~gs~Y~r~gG~~W 359 (593)
T KOG1277|consen 334 VVYALTSPINGYVSGSFYARLGGRRW 359 (593)
T ss_pred HHHHhcccccccccceeeehhccHHH
Confidence 33444444444534444444445554
No 327
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=34.22 E-value=4.5e+02 Score=25.56 Aligned_cols=119 Identities=10% Similarity=0.031 Sum_probs=67.7
Q ss_pred CChhHHHHHHHHHHH-HHHHHHhhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhh-----------------ch-
Q 013453 320 YSTQMVGEVLAITGF-SLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLS-----------------GF- 380 (442)
Q Consensus 320 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~- 380 (442)
.+++....+-...-+ +.++... +..++.++..+.++..+.......+++++++...+. .+
T Consensus 58 ~gae~I~FlK~~~vlP~avif~~-iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~ 136 (509)
T COG3202 58 QGAESISFLKTWGVLPSAVIFTI-IYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPM 136 (509)
T ss_pred CcchhhHHHHHHHhchHHHHHHH-HHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCc
Confidence 345555555544444 3333333 556667777888777665555555555544432210 00
Q ss_pred ---------hhHHHHHHHHHHHHHHHHH-HHHhhhhhhcccCChhhhhHHHHHHHHHHHHHHhhhcccCC
Q 013453 381 ---------GLAFLLNCASVVKNLLSVS-IITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGG 440 (442)
Q Consensus 381 ---------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~gp~i~G 440 (442)
..|.. .....+.-..+.. ..-..+..++|....++..+-.++.+...+++..++..+.+
T Consensus 137 ~l~~~ili~~~Ws~-s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~ 205 (509)
T COG3202 137 FLKWFILIVGEWSY-SLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTS 205 (509)
T ss_pred cceeeeEeecchHH-HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 00211 1111111122222 33357888999999999999999999999998887765543
No 328
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=33.56 E-value=3.9e+02 Score=24.72 Aligned_cols=94 Identities=13% Similarity=0.078 Sum_probs=57.4
Q ss_pred hhHHHHHHHh-cccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhh----HHHHHHHHHHHHHH-hc----
Q 013453 62 PFLYFMIKDF-QIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVI----IMGTASVVIFNTLF-GL---- 131 (442)
Q Consensus 62 ~~~~~~~~~~-~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~----~~~~~~~~i~~~~~-~~---- 131 (442)
..+..+...+ |-+..| .+.+.+.|.....+|+...-++.|.--.-+.+ +.+++.-.-..++. .|
T Consensus 28 lal~tLatyLlG~~Ilq------~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~ 101 (508)
T COG4262 28 LALGTLATYLLGGGILQ------TSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALES 101 (508)
T ss_pred HHHHHHHHHhcCCceee------hHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhcc
Confidence 3444555544 556667 89999999999999999888877753322222 12222111111111 22
Q ss_pred cchHHHHHHHHHHHHhhcchhhH-HHHHhhh
Q 013453 132 SVNFWMAVLTRFLLGSLNGLLGP-IKAYACE 161 (442)
Q Consensus 132 a~~~~~l~~~r~l~G~~~g~~~~-~~~~i~~ 161 (442)
.++-+.+++.-++.|.-.|.-.| ...++..
T Consensus 102 ~~~~~Vly~lt~vIG~LVG~EiPL~mrml~~ 132 (508)
T COG4262 102 APSRLVLYALTAVIGVLVGAEIPLLMRMLQR 132 (508)
T ss_pred chHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 34667788888888988888777 4666554
No 329
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=32.82 E-value=4.3e+02 Score=25.03 Aligned_cols=121 Identities=10% Similarity=0.077 Sum_probs=62.8
Q ss_pred hHHHHHHHHHHhHhcchhhchhHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHH
Q 013453 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (442)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~ 121 (442)
+...+.+-..+..++.....|.+ +.... .++++ ...+.+...+...++.++-+....+. -|-....+...
T Consensus 6 ~~~~lglQh~l~~~~~~i~~p~i--v~~~~-l~~~~------~~~li~at~~~sgi~Tllq~~~~~~~-~~lp~~~G~sf 75 (415)
T TIGR00801 6 QTLVLGLQHLLAMFGGTVLVPLL--VGLAP-LSAEQ------TQYLVSISLLTSGIGTLLQLFRTGGQ-IGLPSYLGSSF 75 (415)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH--Hhccc-CCHHH------HHHHHHHHHHHHHHHHHHHHhhhcCc-eeeeeeecCcH
Confidence 33444444444444333333322 23445 77777 88888888899999999988877654 22222223221
Q ss_pred HHHHHH-HHhccchHHHHHHHHHHHHhhcchhhHH-----HHHhhhhccccchhhhh
Q 013453 122 VVIFNT-LFGLSVNFWMAVLTRFLLGSLNGLLGPI-----KAYACEIFREEHQALGL 172 (442)
Q Consensus 122 ~~i~~~-~~~~a~~~~~l~~~r~l~G~~~g~~~~~-----~~~i~~~~~~~~r~~~~ 172 (442)
..++.. ......++.....+-++.|+........ ...+.+.+|+.-.+...
T Consensus 76 a~i~~~~~~~~~~~~~~~~g~~i~~gl~~~ll~~~~~~~~~~~i~~~~Pp~v~g~iv 132 (415)
T TIGR00801 76 AFVSPMIAIGSGLGIPAIMGALIATGLVYTLLSLLIKKLGPRWLMKLFPPVVTGPVV 132 (415)
T ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchhHHHhH
Confidence 112222 2222234555555555555544443331 23457778887666543
No 330
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=32.49 E-value=1.6e+02 Score=25.65 Aligned_cols=24 Identities=21% Similarity=0.348 Sum_probs=11.1
Q ss_pred hhHHHHHHHHHHhHhcchhhchhH
Q 013453 41 TELFSIWIIVLCTALPISSLFPFL 64 (442)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~ 64 (442)
+++.-+.++.+...+-.....|..
T Consensus 180 ~RivG~~LAv~aGvlyGs~fvPv~ 203 (254)
T PF07857_consen 180 KRIVGIILAVFAGVLYGSNFVPVI 203 (254)
T ss_pred chhHhHHHHHHHHHHHhcccchHH
Confidence 344544444444444444445543
No 331
>COG4769 Predicted membrane protein [Function unknown]
Probab=32.19 E-value=56 Score=25.85 Aligned_cols=51 Identities=18% Similarity=0.293 Sum_probs=33.8
Q ss_pred HHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhh
Q 013453 92 MFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSL 148 (442)
Q Consensus 92 ~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~r~l~G~~ 148 (442)
.+...+.+...-++..++|+|.+-+++.-.. -++.+|..++.+.+++.+-.
T Consensus 83 sfaG~i~S~L~m~~l~~f~~k~~S~lgiS~m------GaF~hNl~QLivas~Lv~~~ 133 (181)
T COG4769 83 SFAGAILSTLFMYFLYQFGPKYLSLLGISVM------GAFTHNLGQLIVASFLVFTT 133 (181)
T ss_pred HHHHHHHHHHHHHHHHHcCCceEeeeehhhH------HHHHHhHHHHHHHHHHHhcc
Confidence 3444555556667888999888755544332 35567888888888877653
No 332
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=31.97 E-value=2.5e+02 Score=26.67 Aligned_cols=28 Identities=36% Similarity=0.329 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhh----cccCC
Q 013453 84 AGYVGSSFMFGRALTSVFWGLVA----DRYGR 111 (442)
Q Consensus 84 ~g~~~s~~~~~~~~~~~~~G~l~----dr~Gr 111 (442)
-|-+.+...+.+++.+++.|+.+ .|.|-
T Consensus 325 rGal~saaI~vYAlTs~i~GY~~gs~Y~r~gG 356 (593)
T KOG1277|consen 325 RGALLSAAIVVYALTSPINGYVSGSFYARLGG 356 (593)
T ss_pred chHHHHHHHHHHHhcccccccccceeeehhcc
Confidence 35566666666666666666554 46653
No 333
>TIGR00267 conserved hypothetical protein TIGR00267. This family is represented in three of the first four completed archaeal genomes, with two members in A. fulgidus.
Probab=31.94 E-value=78 Score=25.49 Aligned_cols=23 Identities=17% Similarity=0.375 Sum_probs=12.9
Q ss_pred HhhhhhhhhhhcccCCchhhHHH
Q 013453 96 ALTSVFWGLVADRYGRKPVIIMG 118 (442)
Q Consensus 96 ~~~~~~~G~l~dr~Grr~~~~~~ 118 (442)
.+.-++.|.+.-|++.++...-+
T Consensus 127 ~~~L~ilG~~~a~~s~~~~~~s~ 149 (169)
T TIGR00267 127 LIALLVLGVYLGRISRENILISS 149 (169)
T ss_pred HHHHHHHHHHHHHHcCCcHHHHH
Confidence 34445566666676665554333
No 334
>PF06341 DUF1056: Protein of unknown function (DUF1056); InterPro: IPR009406 This entry is represented by Bacteriophage bIL286, Orf42. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several putative head-tail joining bacteriophage proteins.
Probab=31.91 E-value=1.2e+02 Score=19.57 Aligned_cols=36 Identities=8% Similarity=-0.000 Sum_probs=22.9
Q ss_pred hHHHHHHHHHHHHhhcchhhHHHHHhhhhccccchh
Q 013453 134 NFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQA 169 (442)
Q Consensus 134 ~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~ 169 (442)
++..+......-++..+.......+++|..+++++|
T Consensus 27 ~it~F~~n~~~g~i~i~I~l~l~G~isE~i~~~Kgg 62 (63)
T PF06341_consen 27 NITAFLINQIAGLISIGITLFLAGLISEFISKQKGG 62 (63)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 445555555555556666666688888988875443
No 335
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=30.84 E-value=2.1e+02 Score=20.70 Aligned_cols=25 Identities=20% Similarity=0.119 Sum_probs=11.1
Q ss_pred hhhhhhhhhhc-ccCCchhhHHHHHH
Q 013453 97 LTSVFWGLVAD-RYGRKPVIIMGTAS 121 (442)
Q Consensus 97 ~~~~~~G~l~d-r~Grr~~~~~~~~~ 121 (442)
+.+.+.|...| +++-++.+.+.+++
T Consensus 57 l~G~~lG~WLD~~~~t~~~~tl~~ll 82 (100)
T TIGR02230 57 LLGVAVGIWLDRHYPSPFSWTLTMLI 82 (100)
T ss_pred HHHHHHHHHHHhhcCCCcHHHHHHHH
Confidence 33334444445 35655444433333
No 336
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=30.62 E-value=2.2e+02 Score=20.85 Aligned_cols=34 Identities=15% Similarity=-0.041 Sum_probs=19.5
Q ss_pred HHHHHHHhhHHHHHHHhhchhHHHHHHHHHHHHH
Q 013453 334 FSLLVFQLSLYPFLERILGPIMVARIAGVLTIPL 367 (442)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (442)
+.+++.+..++.++++..+..++-.+.+.+...+
T Consensus 53 IsGilVGa~iG~llD~~agTsPwglIv~lllGf~ 86 (116)
T COG5336 53 ISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFG 86 (116)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 3333334447777888877776655554444443
No 337
>COG3619 Predicted membrane protein [Function unknown]
Probab=30.08 E-value=3.5e+02 Score=23.07 Aligned_cols=112 Identities=15% Similarity=0.112 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhcccCC-chhhH--HHHHHHHHHHHHHhc----cchHHHHHHHHHHHHh---------
Q 013453 84 AGYVGSSFMFGRALTSVFWGLVADRYGR-KPVII--MGTASVVIFNTLFGL----SVNFWMAVLTRFLLGS--------- 147 (442)
Q Consensus 84 ~g~~~s~~~~~~~~~~~~~G~l~dr~Gr-r~~~~--~~~~~~~i~~~~~~~----a~~~~~l~~~r~l~G~--------- 147 (442)
.........+..+++......+..|..| ..+.. .+.++.....+..++ +++....+..-+..|+
T Consensus 57 ~a~~~~~pii~Fv~Gv~~~~~~~r~~~~~~~~~l~~~~~ll~~~v~~~~~~~p~~~~~~~~~il~~f~mg~Qnasf~k~~ 136 (226)
T COG3619 57 LAVLLLLPILAFVLGVAAAELISRRATRSFIPVLLLVSLLLALIALLALGFIPESSPDFVAVILVAFAMGIQNASFRKVG 136 (226)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5566666667777775555555555544 22222 222333333333333 2455555555455552
Q ss_pred --hcchhhH------HHHHhhhhccccch-hhhhhhhhHhhhhHHHHHHHhhhhhcc
Q 013453 148 --LNGLLGP------IKAYACEIFREEHQ-ALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 148 --~~g~~~~------~~~~i~~~~~~~~r-~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (442)
..+.... ...-+.++...|+. ...-...+...-++.++|...++++..
T Consensus 137 g~~~~~t~~TGnl~~~~~~l~~~l~~k~~~~~~~~~~~~~~il~f~~GAi~g~ll~~ 193 (226)
T COG3619 137 GAPYGTTYVTGNLKSAGRGLGRYLSGKDKEKLRDWLIYLSLILSFIVGAICGALLTL 193 (226)
T ss_pred CccccchhhhhhHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222111 11124455444322 222334444555666666666666655
No 338
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=28.38 E-value=5.8e+02 Score=25.10 Aligned_cols=25 Identities=8% Similarity=0.195 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHhhc
Q 013453 327 EVLAITGFSLLVFQLSLYPFLERILG 352 (442)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (442)
.......+.+.+++. .+.++-+.++
T Consensus 301 ~~i~~y~~~~~iaGy-~S~~~yk~~~ 325 (521)
T PF02990_consen 301 AAIILYALTSFIAGY-VSARLYKSFG 325 (521)
T ss_pred HHHHHHHHHhhHHHH-HHHHHHHHcC
Confidence 344445556666666 4444545443
No 339
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=28.27 E-value=5.1e+02 Score=24.38 Aligned_cols=27 Identities=11% Similarity=-0.125 Sum_probs=15.6
Q ss_pred hhhhHHHHHHHHHHHHHHhhhcccCCC
Q 013453 415 DQRGAANGIAMTGMSLFKAAGPAGGGA 441 (442)
Q Consensus 415 ~~~g~~~g~~~~~~~~g~~~gp~i~G~ 441 (442)
+.....++.....-.....++|.+.|.
T Consensus 171 s~lt~mnatir~iDq~tn~Lapv~tg~ 197 (503)
T KOG2601|consen 171 SVLTNMNATIRGIDQSTNLLAPVITGL 197 (503)
T ss_pred HHHhhcchhhhhhhhhhhchhhhhhcc
Confidence 333334455555556667777776664
No 340
>PF02667 SCFA_trans: Short chain fatty acid transporter; InterPro: IPR006160 Members of this family may be short chain fatty acid transporters although there has been no experimental characterisation of this function.
Probab=27.87 E-value=4.4e+02 Score=25.23 Aligned_cols=14 Identities=21% Similarity=0.038 Sum_probs=8.6
Q ss_pred hhhhhhhhhhcccC
Q 013453 97 LTSVFWGLVADRYG 110 (442)
Q Consensus 97 ~~~~~~G~l~dr~G 110 (442)
..+++..++.||.-
T Consensus 75 A~sp~v~r~l~~lA 88 (453)
T PF02667_consen 75 ASSPPVKRLLDRLA 88 (453)
T ss_pred hCChHHHHHHHHHH
Confidence 34566677777654
No 341
>PF04024 PspC: PspC domain; InterPro: IPR007168 This domain is found in Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.
Probab=27.50 E-value=39 Score=21.74 Aligned_cols=34 Identities=18% Similarity=0.261 Sum_probs=17.0
Q ss_pred cccccccccCCcChhHHHHHHHHH---HH-HHHHHhhccccC
Q 013453 203 LFSSESLFGKFPYFLPCLCISLFA---FG-VTIAAFWLPETL 240 (442)
Q Consensus 203 ~~gw~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~e~~ 240 (442)
++||+..+ .|..+.+..+.. ++ -++.++.+|+.+
T Consensus 23 ~~gid~~~----vRl~~v~l~~~~~~~~l~Y~~~w~~lP~~~ 60 (61)
T PF04024_consen 23 YFGIDPTL----VRLIFVVLTFFTGGGILLYLILWLLLPKEP 60 (61)
T ss_pred HHCcCHHH----HHHHHHHHHHHHhHHHHHHHHHHHHcCCCC
Confidence 45555444 455555444432 22 245556677654
No 342
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=27.09 E-value=1.7e+02 Score=18.51 Aligned_cols=28 Identities=11% Similarity=0.237 Sum_probs=15.2
Q ss_pred CCcChhHHHHHHHHHHHHHHHHhhcccc
Q 013453 212 KFPYFLPCLCISLFAFGVTIAAFWLPET 239 (442)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 239 (442)
.+.+.....+..+.+++.......+|++
T Consensus 28 ~~n~~~~~Ii~vi~~i~~~~~~~~i~~~ 55 (57)
T PF11151_consen 28 TYNFTTAAIIAVIFGIIVANIIAVIPKK 55 (57)
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 3445555566666666555554455544
No 343
>TIGR02840 spore_YtaF putative sporulation protein YtaF. This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.
Probab=26.25 E-value=3.9e+02 Score=22.36 Aligned_cols=32 Identities=13% Similarity=0.164 Sum_probs=14.2
Q ss_pred cCChhHHHHHHHHHHHHHHHHHhhHHHHHHHh
Q 013453 319 NYSTQMVGEVLAITGFSLLVFQLSLYPFLERI 350 (442)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (442)
|.+.........+........+..+++++.++
T Consensus 153 g~~~~~~~~~igivs~i~~~~G~~lG~~~~~~ 184 (206)
T TIGR02840 153 GLNPLATSILVAVMSFIFVSLGLFLGKKISKK 184 (206)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 44444444444444444443333355544443
No 344
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=24.38 E-value=2.1e+02 Score=20.00 Aligned_cols=39 Identities=15% Similarity=0.102 Sum_probs=25.4
Q ss_pred HhhhhhhhhhhcccCC-------chhhHHHHHHHHHHHHHHhccch
Q 013453 96 ALTSVFWGLVADRYGR-------KPVIIMGTASVVIFNTLFGLSVN 134 (442)
Q Consensus 96 ~~~~~~~G~l~dr~Gr-------r~~~~~~~~~~~i~~~~~~~a~~ 134 (442)
....+.++++.+|..+ ++.+..+.++...+.++++..+|
T Consensus 32 ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS 77 (86)
T PF10785_consen 32 TAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRS 77 (86)
T ss_pred HHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHh
Confidence 4445556666666554 67777777777777777776544
No 345
>COG3559 TnrB3 Putative exporter of polyketide antibiotics [Cell envelope biogenesis, outer membrane]
Probab=24.19 E-value=6.3e+02 Score=24.04 Aligned_cols=28 Identities=11% Similarity=0.126 Sum_probs=15.4
Q ss_pred HHHHHHHh---hcchhhHH-HHHhhhhccccc
Q 013453 140 LTRFLLGS---LNGLLGPI-KAYACEIFREEH 167 (442)
Q Consensus 140 ~~r~l~G~---~~g~~~~~-~~~i~~~~~~~~ 167 (442)
.+-+..|+ +.|+.+.+ .++..+.++..+
T Consensus 163 ags~afgvtl~~tg~~~~avaalf~qL~~~a~ 194 (536)
T COG3559 163 AGSVAFGVTLAATGMVFTAVAALFAQLSPSAR 194 (536)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhCcccc
Confidence 34455555 24455554 666677776543
No 346
>TIGR00366 conserved hypothetical integral membrane protein.
Probab=23.73 E-value=6.2e+02 Score=24.18 Aligned_cols=16 Identities=19% Similarity=0.229 Sum_probs=8.5
Q ss_pred ccccccccchhHHHHH
Q 013453 274 PKKSLLKNWPLMSSII 289 (442)
Q Consensus 274 ~~~~~~~~~~~~~~~~ 289 (442)
+..+-+.+.+....++
T Consensus 240 tpae~le~S~~l~~li 255 (438)
T TIGR00366 240 TIAEKLENSRVLALLI 255 (438)
T ss_pred ChHHHHhcCHHHHHHH
Confidence 4455566666544433
No 347
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=23.61 E-value=5.7e+02 Score=23.38 Aligned_cols=59 Identities=8% Similarity=-0.003 Sum_probs=39.7
Q ss_pred HHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHH-HHHHHHH
Q 013453 64 LYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS-VVIFNTL 128 (442)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~-~~i~~~~ 128 (442)
.|.+.+-+...+.. .-+....+.+...++.+-+|.-.|+.|---..-+.+-+ ..+++++
T Consensus 58 ip~~~~i~~~~~~~------~l~~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTli 117 (344)
T PF06379_consen 58 IPDFFSIYSATPAS------TLFWTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLI 117 (344)
T ss_pred CCcHHHHHHhCChh------HHHHHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhch
Confidence 45666666655555 45555678888899999999999999876666555433 3344444
No 348
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=23.53 E-value=5.3e+02 Score=22.94 Aligned_cols=42 Identities=12% Similarity=0.017 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhhchhHHHHHHHHHHHHHH
Q 013453 324 MVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLL 368 (442)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (442)
++++-.-++-+.+++.+. -++.+|.+|.....+.....++..
T Consensus 100 eaSLGY~InPL~~VllG~---lflkErls~~Q~iAV~lA~~GV~~ 141 (293)
T COG2962 100 EASLGYFINPLVNVLLGR---LFLKERLSRLQWIAVGLAAAGVLI 141 (293)
T ss_pred HHHhHHHHHHHHHHHHHH---HHHHhhccHHHHHHHHHHHHHHHH
Confidence 333333334455544322 345677777776666555554443
No 349
>TIGR00836 amt ammonium transporter. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf.
Probab=21.46 E-value=7e+02 Score=23.59 Aligned_cols=48 Identities=13% Similarity=0.112 Sum_probs=29.7
Q ss_pred HHHHhhcchhhH-HHHHhhhhccccchhhhhhhhhHhhhhHHHHHHHhh
Q 013453 143 FLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG 190 (442)
Q Consensus 143 ~l~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 190 (442)
++.|+..|.... ...++.+..+-++---+.++...+.-+|.+..++++
T Consensus 283 ~viG~iag~~~~~~~~~l~~~~~iDD~~~~~~vHg~~Gi~G~i~~glfa 331 (403)
T TIGR00836 283 IIIGLVAGVLCYLAVSKLKKKLKIDDPLDAFAVHGVGGIWGLIATGLFA 331 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCcccchhhhhhHHHHHHHHHHhc
Confidence 455555555544 344566666666665677777777766766666554
No 350
>TIGR00210 gltS sodium--glutamate symport carrier (gltS).
Probab=21.45 E-value=6.9e+02 Score=23.56 Aligned_cols=99 Identities=24% Similarity=0.255 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHH-HHh---ccchHHHHHHHHHHHHhhcchhhHH---H
Q 013453 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNT-LFG---LSVNFWMAVLTRFLLGSLNGLLGPI---K 156 (442)
Q Consensus 84 ~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~-~~~---~a~~~~~l~~~r~l~G~~~g~~~~~---~ 156 (442)
++-+..-.++..++.++-.-.+.|-.++=-++++.-+++.+... ... +-++|..-+.+-...|.+.|....+ .
T Consensus 278 I~~~sLdlfl~~AlmsL~L~~l~~~a~Plliil~~q~i~~~l~~~fv~fr~mg~~ydaaV~~ag~~G~~lGatptaianm 357 (398)
T TIGR00210 278 IGNVSLSLFLAIALMSLQLWELADLAGPIALILLVQVMFMALYAIFVTFRLMGKDYDAAVLCAGHCGFGLGATPTAIANM 357 (398)
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhccchHHHHHHhcccccccccchHHHHHHH
Confidence 55556667788888888888888988887666665555444332 222 2357777776667777776665553 4
Q ss_pred HHhhhhccccchhhhhhhhhHhhhhHHHHHHHhhhhhcc
Q 013453 157 AYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (442)
Q Consensus 157 ~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (442)
.-+.|.+.+++++ ..+-|++++++.|
T Consensus 358 ~av~~~yg~s~~a-------------f~ivPlvgaf~id 383 (398)
T TIGR00210 358 QAVTERFGPSHQA-------------FIVVPLVGAFFID 383 (398)
T ss_pred HHHHhccCCCCcc-------------eehhhhHHHHHHH
Confidence 4566766666553 5678999999888
No 351
>PF09605 Trep_Strep: Hypothetical bacterial integral membrane protein (Trep_Strep); InterPro: IPR011733 This family consists of strongly hydrophobic proteins about 190 amino acids in length with a strongly basic motif near the C terminus. If is found in rather few species, but in paralogous families of 12 members in the oral pathogenic spirochaete Treponema denticola and 2 in Streptococcus pneumoniae (strain ATCC BAA-255 / R6).
Probab=20.13 E-value=4.5e+02 Score=21.54 Aligned_cols=39 Identities=8% Similarity=0.198 Sum_probs=28.1
Q ss_pred HHHHHhhhhhhhhhhcccCCchhhHHHHHHHHHHHHHHh
Q 013453 92 MFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFG 130 (442)
Q Consensus 92 ~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~i~~~~~~ 130 (442)
.+...+++++.=.+..|.++|.++.+..++.++..++++
T Consensus 38 ~i~ali~g~vyml~~~KV~K~G~~~i~~~i~gl~~~~~G 76 (186)
T PF09605_consen 38 AIAALICGIVYMLMVAKVPKRGAFLIMGIIMGLIFFLMG 76 (186)
T ss_pred HHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHh
Confidence 344556777777788899999888877777766665554
Done!