RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= 013459
(442 letters)
>d2gi3a1 c.117.1.1 (A:1-475) Glutamyl-tRNA(Gln) amidotransferase
subunit A {Thermotoga maritima [TaxId: 2336]}
Length = 475
Score = 139 bits (352), Expect = 2e-37
Identities = 70/330 (21%), Positives = 135/330 (40%), Gaps = 30/330 (9%)
Query: 1 MPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTS 60
+PGGSS G+A AV+A +V +LG DT G VR P++ CG++G++P+YG VS G++ ++S
Sbjct: 137 VPGGSSGGSAAAVSAGMVVAALGSDTGGSVRQPASLCGVVGYKPTYGLVSRYGLVAFASS 196
Query: 61 LDTVGWFARDPK-ILRHVGHVLLQLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVI-- 117
LD +G + + + + + A R++ + E + V + +
Sbjct: 197 LDQIGPITKTVRDAAILMEIISGRDENDATTVNRKVDFLSEIEEGVSGMKFAVPEEIYEH 256
Query: 118 ---KSTEKLFGRQVLKHENLG-EYFDSKVPSLKGFHKT-----------NGELKNVMRLI 162
+ + F + E LG + K+P +K T N + ++
Sbjct: 257 DIEEGVSERFEEALKLLERLGAKVERVKIPHIKYSVATYYVIAPAEASSNLARFDGVKYG 316
Query: 163 QRYEFKNNHNEWIESVKPALDPDISAEIGEML-----EISETVIENCKSIRNEMRSAISS 217
R + K ++++ ++ I E +R ++ ++
Sbjct: 317 LRIKEKGLREMYMKTRNVGFGEEVRRRIMIGTFTLSAAYYEAYFNKAMKVRRKISDELNE 376
Query: 218 LLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCP 277
+L ++TPT+ K+G + Y F+ A+++G ++VP G+ + P
Sbjct: 377 VLSQYDAILTPTSPVTAFKIGEIKDPLTYYLMDIFT--IPANLAGLPAISVPFGFSNNLP 434
Query: 278 TSVSFIARHGGDRFLLDTVQNMYASLQEQA 307
V I R D + A E+
Sbjct: 435 VGVQVIGRRFADGKVFR-----IARAIEKN 459
>d2f2aa1 c.117.1.1 (A:1-485) Glutamyl-tRNA(Gln) amidotransferase
subunit A {Staphylococcus aureus [TaxId: 1280]}
Length = 485
Score = 138 bits (348), Expect = 9e-37
Identities = 69/320 (21%), Positives = 130/320 (40%), Gaps = 28/320 (8%)
Query: 1 MPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTS 60
+PGGSS G+A AVAA LV SLG DT G +R P+A+CG++G +P+YG VS G++ ++S
Sbjct: 150 VPGGSSGGSAAAVAAGLVPLSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASS 209
Query: 61 LDTVGWFARDPK----ILRHVGHVLLQLPFAAQRSPRQIIIA-DDCFELLKI--PADRVV 113
LD +G R+ K +L + + +A + LK+ P + +
Sbjct: 210 LDQIGPLTRNVKDNAIVLEAISGADVNDSTSAPVDDVDFTSEIGKDIKGLKVALPKEYLG 269
Query: 114 QVVIKSTEKLFGRQVLKHENLG-EYFDSKVPSLK------------GFHKTNGELKNVMR 160
+ V ++ V ++LG + +P+ K +
Sbjct: 270 EGVADDVKEAVQNAVETLKSLGAVVEEVSLPNTKFGIPSYYVIASSEASSNLSRFDGIRY 329
Query: 161 LIQRYEFKNNHNEWIESVKPALDPDISAEIGEML-----EISETVIENCKSIRNEMRSAI 215
E + + S ++ I + + + +R +++
Sbjct: 330 GYHSKEAHSLEELYKMSRSEGFGKEVKRRIFLGTFALSSGYYDAYYKKSQKVRTLIKNDF 389
Query: 216 SSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL-SIASVSGCCQVTVPLGYYD 274
+ ++ ++V PT LG E + + A LL + +++G ++VP G +
Sbjct: 390 DKVFENYDVVVGPTAPTTAFNLG--EEIDDPLTMYANDLLTTPVNLAGLPGISVPCGQSN 447
Query: 275 KCPTSVSFIARHGGDRFLLD 294
P + FI + ++ L
Sbjct: 448 GRPIGLQFIGKPFDEKTLYR 467
>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing
protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 201
Score = 86.6 bits (213), Expect = 2e-20
Identities = 37/106 (34%), Positives = 57/106 (53%)
Query: 325 SAEIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCT 384
SA+ KE+GN+ + +++ +A + Y AI N A YY+NRA YL+ QA ADC
Sbjct: 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCR 62
Query: 385 KAINLDKKNVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKRA 430
+A+ LD ++VKA+ G + + Y EAI + A L +
Sbjct: 63 RALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLN 108
Score = 46.5 bits (109), Expect = 2e-06
Identities = 11/107 (10%), Positives = 31/107 (28%), Gaps = 5/107 (4%)
Query: 333 GNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKK 392
G + + + +AI+ A L + + + L A+ +I +
Sbjct: 79 GQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALR-----IAKKKRWNSIEERRI 133
Query: 393 NVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKRASLSADRLRK 439
+ ++ L R + + +E+ + +
Sbjct: 134 HQESELHSYLTRLIAAERERELEECQRNHEGHEDDGHIRAQQACIEA 180
>d1m22a_ c.117.1.1 (A:) Peptide amidase Pam {Stenotrophomonas
maltophilia [TaxId: 40324]}
Length = 490
Score = 85.6 bits (210), Expect = 1e-18
Identities = 78/335 (23%), Positives = 120/335 (35%), Gaps = 40/335 (11%)
Query: 1 MPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTS 60
P GSSSG+AVAVAA+L ++G +T G + P+A G++G +P+ G VS GIIPIS S
Sbjct: 157 SPCGSSSGSAVAVAANLASVAIGTETDGSIVCPAAINGVVGLKPTVGLVSRDGIIPISFS 216
Query: 61 LDTVGWFARDPKILRHVGHVLLQL-PFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKS 119
DT G AR V + + D L R ++ +
Sbjct: 217 QDTAGPMARSVADAAAVLTAIAGRDDADPATATMPGRAVYDYTARLDPQGLRGKRIGLLQ 276
Query: 120 TEKLFGRQV--LKHENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIES 177
T L R + L + E + + G R + YEFK + +
Sbjct: 277 TPLLKYRGMPPLIEQAATELRRAGAVVVPVELPNQGAWAEAERTLLLYEFKAGLERYFNT 336
Query: 178 VKPAL-----------------------DPDISAEIGEMLEISETVIENCKSIRNEMRSA 214
+ L + + A+ L + + R
Sbjct: 337 HRAPLRSLADLIAFNQAHSKQELGLFGQELLVEADATAGLADPAYIRARSDARRLAGPEG 396
Query: 215 ISSLLKDDGI--LVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGY 272
I + L + LV PTT P + + S A+V+G +TVP+G
Sbjct: 397 IDAALAAHQLDALVAPTTGVAWPIRSEGDDFPGES-------YSAAAVAGYPSLTVPMGQ 449
Query: 273 YDKCPTSVSFIARHGGDRFLLDTVQNMYASLQEQA 307
D P + F+ + L++ A EQ
Sbjct: 450 IDGLPVGLLFMGTAWSEPKLIE-----MAYAYEQR 479
>d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Length = 128
Score = 74.5 bits (182), Expect = 7e-17
Identities = 38/112 (33%), Positives = 56/112 (50%), Gaps = 7/112 (6%)
Query: 324 QSAEIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADC 383
+ A KE GN AYK K + A+ Y +A +L+ N TY +N+AA Y E G + + C
Sbjct: 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELC 61
Query: 384 TKAINLDKKNV-------KAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNK 428
KAI + ++N KAY R G + YK+AI ++ +L T
Sbjct: 62 EKAIEVGRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRTPD 113
>d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey
(Saimiri boliviensis) [TaxId: 27679]}
Length = 168
Score = 67.7 bits (164), Expect = 5e-14
Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 15/131 (11%)
Query: 324 QSAEIAKEKGNQAYKDKQWLKAISFYTEAIKL---------------NGNNATYYSNRAA 368
+ A I KEKG +K ++++A+ Y + + + N A
Sbjct: 13 EQAAIVKEKGTVYFKGGKYVQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAM 72
Query: 369 AYLESGSFLQAEADCTKAINLDKKNVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNK 428
YL+ + +A C KA+ LD N K RRG A+ ++ ++ A DF L + P NK
Sbjct: 73 CYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNK 132
Query: 429 RASLSADRLRK 439
A L +K
Sbjct: 133 AARLQIFMCQK 143
Score = 33.4 bits (75), Expect = 0.022
Identities = 3/42 (7%), Positives = 14/42 (33%)
Query: 340 KQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEA 381
++ A + + +++N N ++ + +
Sbjct: 112 NEFESAKGDFEKVLEVNPQNKAARLQIFMCQKKAKEHNERDR 153
>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT
{Human (Homo sapiens) [TaxId: 9606]}
Length = 388
Score = 69.7 bits (169), Expect = 1e-13
Identities = 11/80 (13%), Positives = 27/80 (33%)
Query: 331 EKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLD 390
E ++ Y+ + A + + +N ++ + + ++ T AI +
Sbjct: 4 ELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQN 63
Query: 391 KKNVKAYLRRGTAREMLGYY 410
+AY G + G
Sbjct: 64 PLLAEAYSNLGNVYKERGQL 83
Score = 67.8 bits (164), Expect = 6e-13
Identities = 22/109 (20%), Positives = 42/109 (38%)
Query: 322 QKQSAEIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEA 381
Q + N + +A Y A++L +A +N A E G+ +A
Sbjct: 267 QPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVR 326
Query: 382 DCTKAINLDKKNVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKRA 430
KA+ + + A+ + + G +EA+ + A+ + PT A
Sbjct: 327 LYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADA 375
Score = 67.4 bits (163), Expect = 8e-13
Identities = 26/105 (24%), Positives = 39/105 (37%)
Query: 326 AEIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTK 385
A + Y+ AI Y AI+L + Y N A A E GS +AE
Sbjct: 237 AVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNT 296
Query: 386 AINLDKKNVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKRA 430
A+ L + + + G +EA+ + AL + P A
Sbjct: 297 ALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAA 341
Score = 65.8 bits (159), Expect = 3e-12
Identities = 15/76 (19%), Positives = 30/76 (39%)
Query: 333 GNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKK 392
N + +A+ Y +A+++ A +SN A+ + G +A +AI +
Sbjct: 312 ANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 371
Query: 393 NVKAYLRRGTAREMLG 408
AY G + +
Sbjct: 372 FADAYSNMGNTLKEMQ 387
Score = 62.8 bits (151), Expect = 2e-11
Identities = 27/104 (25%), Positives = 43/104 (41%)
Query: 322 QKQSAEIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEA 381
+ GN + + + +A++ Y A+ L+ N+A + N A Y E G A
Sbjct: 199 DPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAID 258
Query: 382 DCTKAINLDKKNVKAYLRRGTAREMLGYYKEAIEDFSYALVLEP 425
+AI L AY A + G EA + ++ AL L P
Sbjct: 259 TYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCP 302
Score = 55.8 bits (133), Expect = 3e-09
Identities = 11/66 (16%), Positives = 19/66 (28%)
Query: 365 NRAAAYLESGSFLQAEADCTKAINLDKKNVKAYLRRGTAREMLGYYKEAIEDFSYALVLE 424
A ++G F AE C + + N L + + + A+
Sbjct: 4 ELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQN 63
Query: 425 PTNKRA 430
P A
Sbjct: 64 PLLAEA 69
Score = 49.7 bits (117), Expect = 4e-07
Identities = 19/84 (22%), Positives = 33/84 (39%)
Query: 334 NQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKKN 393
N + +A + Y +AI+ N A +SN + G A KA+ LD
Sbjct: 143 NLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNF 202
Query: 394 VKAYLRRGTAREMLGYYKEAIEDF 417
+ AY+ G + + A+ +
Sbjct: 203 LDAYINLGNVLKEARIFDRAVAAY 226
Score = 48.1 bits (113), Expect = 1e-06
Identities = 23/118 (19%), Positives = 40/118 (33%), Gaps = 14/118 (11%)
Query: 320 FNQKQSAEIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFL-- 377
Q A G + AI + +A+ L+ N AY+ G+ L
Sbjct: 163 ETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD-------AYINLGNVLKE 215
Query: 378 -----QAEADCTKAINLDKKNVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKRA 430
+A A +A++L + + G AI+ + A+ L+P A
Sbjct: 216 ARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDA 273
Score = 38.9 bits (89), Expect = 0.001
Identities = 11/51 (21%), Positives = 20/51 (39%)
Query: 324 QSAEIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESG 374
+ A + + + +A+ Y EAI+++ A YSN E
Sbjct: 337 EFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQ 387
Score = 38.1 bits (87), Expect = 0.001
Identities = 11/50 (22%), Positives = 21/50 (42%)
Query: 322 QKQSAEIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYL 371
+ + + + ++ ++ ++ F T AIK N A YSN Y
Sbjct: 29 EPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYK 78
>d1ocka_ c.117.1.1 (A:) Malonamidase E2 {Bradyrhizobium japonicum
[TaxId: 375]}
Length = 412
Score = 69.8 bits (169), Expect = 1e-13
Identities = 64/307 (20%), Positives = 110/307 (35%), Gaps = 24/307 (7%)
Query: 1 MPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTS 60
PGGSSSG+A AV A ++ +LG T G V P+A+CG +PS+ + +G+ S +
Sbjct: 127 SPGGSSSGSAAAVGAGMIPLALGTQTGGSVIRPAAYCGTAAIKPSFRMLPTVGVKCYSWA 186
Query: 61 LDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKST 120
LDTVG F + L + + P + + + + +++
Sbjct: 187 LDTVGLFGARAEDLARGLLAMTGRSEFSGIVPAKAPRIGVVRQEFAGAVEPAAEQGLQAA 246
Query: 121 EKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKP 180
K R + + E + +IQ +E
Sbjct: 247 IKAAERAGASVQA------------IDLPEAVHEAWRIHPIIQDFEAHRALAWEFSEHHD 294
Query: 181 ALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGK 240
+ P + A + + ++ + + I R + + + +L+T + P
Sbjct: 295 EIAPMLRASLDATVGLTPKEYDEARRIGRRGRRELGEVFEGVDVLLTYSAPGTAPAKAL- 353
Query: 241 EMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLDTVQNMY 300
+ NR ++L+ G V VP+ P V IAR G D L T
Sbjct: 354 ASTGDPRYNRLWTLM------GNPCVNVPVLKVGGLPIGVQVIARFGNDAHALAT----- 402
Query: 301 ASLQEQA 307
A E A
Sbjct: 403 AWFLEDA 409
>d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 159
Score = 65.8 bits (159), Expect = 2e-13
Identities = 44/116 (37%), Positives = 67/116 (57%)
Query: 324 QSAEIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADC 383
+ AE K + N +K K + AI FY++AI+LN +NA YY NR+ AYL + + A D
Sbjct: 8 KRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDA 67
Query: 384 TKAINLDKKNVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKRASLSADRLRK 439
T+AI LDKK +K Y RR + LG ++ A+ D+ + ++P +K A + K
Sbjct: 68 TRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNK 123
>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1
(PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]}
Length = 323
Score = 62.1 bits (149), Expect = 3e-11
Identities = 16/122 (13%), Positives = 37/122 (30%)
Query: 321 NQKQSAEIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAE 380
N + E+G + ++ A+ + A++ + + + E+ L A
Sbjct: 14 NPLRDHPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENEQELLAI 73
Query: 381 ADCTKAINLDKKNVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKRASLSADRLRKV 440
+ + + L N A + + ++A E L P A+
Sbjct: 74 SALRRCLELKPDNQTALMALAVSFTNESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGG 133
Query: 441 FM 442
Sbjct: 134 AG 135
Score = 42.5 bits (98), Expect = 5e-05
Identities = 20/98 (20%), Positives = 43/98 (43%)
Query: 333 GNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKK 392
G ++ KA+ +T A+ + N+ ++ A +A A +A+ L
Sbjct: 179 GVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPG 238
Query: 393 NVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKRA 430
+++ G + LG ++EA+E F AL ++ ++
Sbjct: 239 YIRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGP 276
Score = 30.5 bits (67), Expect = 0.36
Identities = 6/41 (14%), Positives = 12/41 (29%)
Query: 337 YKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFL 377
+A+ + EA+ + + A S L
Sbjct: 251 INLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTL 291
>d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 59.3 bits (142), Expect = 4e-11
Identities = 33/131 (25%), Positives = 53/131 (40%), Gaps = 15/131 (11%)
Query: 324 QSAEIAKEKGNQAYKDKQWLKAISFYTEA---------------IKLNGNNATYYSNRAA 368
+ + I KE+G +K+ ++ +A+ Y + K + N A
Sbjct: 11 EQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAM 70
Query: 369 AYLESGSFLQAEADCTKAINLDKKNVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNK 428
+L+ +F A C KA+ LD N K RRG A + ++ A DF L L P NK
Sbjct: 71 CHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNK 130
Query: 429 RASLSADRLRK 439
A ++
Sbjct: 131 AAKTQLAVCQQ 141
Score = 30.8 bits (68), Expect = 0.21
Identities = 8/57 (14%), Positives = 17/57 (29%), Gaps = 5/57 (8%)
Query: 341 QWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADC-----TKAINLDKK 392
+ A + + + ++L NN + A L E + + K
Sbjct: 111 DFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFERLAEEENK 167
>d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus)
[TaxId: 9913]}
Length = 169
Score = 58.9 bits (141), Expect = 6e-11
Identities = 31/139 (22%), Positives = 59/139 (42%)
Query: 301 ASLQEQADIATKSKLSTNTFNQKQSAEIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNNA 360
+ + I+ K NTF + Q+ E+A +K + + + +A + + KL
Sbjct: 18 KDVDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVAL 77
Query: 361 TYYSNRAAAYLESGSFLQAEADCTKAINLDKKNVKAYLRRGTAREMLGYYKEAIEDFSYA 420
+ N A L+ + A C +A+ +D N KA RR + L Y +A+ D A
Sbjct: 78 SCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKA 137
Query: 421 LVLEPTNKRASLSADRLRK 439
+ P +K ++++
Sbjct: 138 QEIAPEDKAIQAELLKVKQ 156
Score = 31.6 bits (70), Expect = 0.11
Identities = 9/84 (10%), Positives = 26/84 (30%), Gaps = 1/84 (1%)
Query: 298 NMYASLQEQADIATKSKLSTNTFNQKQSAEIAKEKGNQAYKDKQWL-KAISFYTEAIKLN 356
N+ A + +D S A + Q ++ + +A++ +A ++
Sbjct: 82 NIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIA 141
Query: 357 GNNATYYSNRAAAYLESGSFLQAE 380
+ + + + E
Sbjct: 142 PEDKAIQAELLKVKQKIKAQKDKE 165
>d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl
isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]}
Length = 153
Score = 58.5 bits (140), Expect = 6e-11
Identities = 38/146 (26%), Positives = 57/146 (39%), Gaps = 16/146 (10%)
Query: 310 ATKSKLSTNTFNQKQSAEIAKEKGNQAYKDKQWLKAISFYTE----------------AI 353
A KS + QSA KE+GN+ +K + +AI Y E
Sbjct: 1 AKKSIYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLD 60
Query: 354 KLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKKNVKAYLRRGTAREMLGYYKEA 413
K + N A Y ++ + +A +K + +DK NVKA + G A G+ +EA
Sbjct: 61 KKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEA 120
Query: 414 IEDFSYALVLEPTNKRASLSADRLRK 439
E+ A L P N S +
Sbjct: 121 KENLYKAASLNPNNLDIRNSYELCVN 146
>d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Length = 117
Score = 57.4 bits (137), Expect = 6e-11
Identities = 37/107 (34%), Positives = 54/107 (50%)
Query: 324 QSAEIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADC 383
+ KEKGN+A A+ Y+EAIKL+ +N YSNR+AAY + G + +A D
Sbjct: 1 EQVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDG 60
Query: 384 TKAINLDKKNVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKRA 430
K ++L K Y R+ A E L ++EA + L E N +
Sbjct: 61 CKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQL 107
Score = 28.5 bits (62), Expect = 0.77
Identities = 6/34 (17%), Positives = 10/34 (29%)
Query: 337 YKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAY 370
++ +A Y E +K NN
Sbjct: 82 EFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNME 115
>d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2,
p67-phox) {Human (Homo sapiens) [TaxId: 9606]}
Length = 192
Score = 59.1 bits (142), Expect = 7e-11
Identities = 25/96 (26%), Positives = 38/96 (39%), Gaps = 3/96 (3%)
Query: 332 KGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDK 391
+G A K W A+ ++ ++ N Y + +AE T++IN DK
Sbjct: 11 EGVLAADKKDWKGALDAFSAVQD---PHSRICFNIGCMYTILKNMTEAEKAFTRSINRDK 67
Query: 392 KNVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTN 427
AY +RG Y AI+D AL+ N
Sbjct: 68 HLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGN 103
Score = 51.4 bits (122), Expect = 3e-08
Identities = 19/127 (14%), Positives = 40/127 (31%), Gaps = 16/127 (12%)
Query: 322 QKQSAEIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEA 381
Q + I G K +A +T +I + + A Y R Y ++ + A
Sbjct: 32 QDPHSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEKYDLAIK 91
Query: 382 DCTKAINLDKKN----------------VKAYLRRGTAREMLGYYKEAIEDFSYALVLEP 425
D +A+ + N + +K+A E + A ++
Sbjct: 92 DLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKS 151
Query: 426 TNKRASL 432
+ + +
Sbjct: 152 EPRHSKI 158
Score = 37.5 bits (86), Expect = 0.001
Identities = 13/99 (13%), Positives = 33/99 (33%), Gaps = 12/99 (12%)
Query: 327 EIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKA 386
++A + +A + + I + ++ N A Y + + +AE A
Sbjct: 87 DLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALA 146
Query: 387 INLDKKNVKAYLRRGTAREMLGYYKEAIEDFSYALVLEP 425
++ + + + +A+E + EP
Sbjct: 147 TSMKSEPRHSKI------------DKAMECVWKQKLYEP 173
>d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio
parahaemolyticus [TaxId: 670]}
Length = 264
Score = 57.0 bits (137), Expect = 7e-10
Identities = 18/102 (17%), Positives = 37/102 (36%)
Query: 333 GNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKK 392
A + Q +A+ EAIK + +A+ S+ G F +A+ ++I L +
Sbjct: 3 WKNALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPE 62
Query: 393 NVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKRASLSA 434
+ + + K+ + + A VL +
Sbjct: 63 YLPGASQLRHLVKAAQARKDFAQGAATAKVLGENEELTKSLV 104
Score = 44.6 bits (105), Expect = 1e-05
Identities = 12/65 (18%), Positives = 20/65 (30%)
Query: 366 RAAAYLESGSFLQAEADCTKAINLDKKNVKAYLRRGTAREMLGYYKEAIEDFSYALVLEP 425
+ L G QA +AI K+ + G ++ A E ++ L P
Sbjct: 2 QWKNALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFP 61
Query: 426 TNKRA 430
Sbjct: 62 EYLPG 66
>d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase
alpha-subunit, N-terminal domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 334
Score = 56.2 bits (134), Expect = 2e-09
Identities = 15/99 (15%), Positives = 31/99 (31%)
Query: 331 EKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLD 390
E A+ ++ FY + S L++ + + +
Sbjct: 213 ELVQNAFFTDPNDQSAWFYHRWLLGRAEPLFRCELSVEKSTVLQSELESCKELQELEPEN 272
Query: 391 KKNVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKR 429
K + + A + L Y KE ++ FS ++P
Sbjct: 273 KWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAA 311
Score = 39.6 bits (91), Expect = 6e-04
Identities = 7/60 (11%), Positives = 18/60 (30%)
Query: 321 NQKQSAEIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAE 380
K + + +++ ++ A Y + + +L S L+ E
Sbjct: 271 ENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDLRSKFLLENSVLKME 330
Score = 37.7 bits (86), Expect = 0.002
Identities = 12/104 (11%), Positives = 34/104 (32%), Gaps = 3/104 (2%)
Query: 330 KEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAA--YLESGSFLQAEADCTKAI 387
+ + + + F +++N + + +R L ++ + C + +
Sbjct: 77 ETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFL 136
Query: 388 NLDKKNV-KAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKRA 430
D++N RR A + E + + +N +
Sbjct: 137 EADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSS 180
Score = 37.7 bits (86), Expect = 0.002
Identities = 10/96 (10%), Positives = 28/96 (29%), Gaps = 12/96 (12%)
Query: 344 KAISFYTEAIKLNGNNATYYSNR----------AAAYLESGSFLQAEADCTKAINLDKKN 393
+ ++ + N + AT ++ R + + + ++ K+
Sbjct: 47 SVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKS 106
Query: 394 VKAYLRRGTAREMLGY--YKEAIEDFSYALVLEPTN 427
+ R L + +E + L + N
Sbjct: 107 YGTWHHRCWLLSRLPEPNWARELELCARFLEADERN 142
>d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium
tepidum [TaxId: 1097]}
Length = 156
Score = 50.1 bits (118), Expect = 4e-08
Identities = 24/137 (17%), Positives = 50/137 (36%), Gaps = 23/137 (16%)
Query: 326 AEIAKEKGNQAYKDKQWLKAISFYTEAIKLN------------GNNATYYSNRAAAYLES 373
A +A + ++ +A + A++++ G +A ++ A A
Sbjct: 9 AYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGL 68
Query: 374 GSFLQAEADCTKAI-----------NLDKKNVKAYLRRGTAREMLGYYKEAIEDFSYALV 422
SF +A KA+ + K + A R A + LG EA+ +F +
Sbjct: 69 RSFDEALHSADKALHYFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVE 128
Query: 423 LEPTNKRASLSADRLRK 439
+ K + +R+ +
Sbjct: 129 MIEERKGETPGKERMME 145
Score = 25.9 bits (55), Expect = 8.2
Identities = 7/47 (14%), Positives = 16/47 (34%)
Query: 362 YYSNRAAAYLESGSFLQAEADCTKAINLDKKNVKAYLRRGTAREMLG 408
+RA A G +A + K + + ++ + E+
Sbjct: 102 AVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETPGKERMMEVAI 148
>d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase
alpha-subunit {Human (Homo sapiens) [TaxId: 9606]}
Length = 315
Score = 49.2 bits (116), Expect = 4e-07
Identities = 20/91 (21%), Positives = 33/91 (36%), Gaps = 1/91 (1%)
Query: 338 KDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQ-AEADCTKAINLDKKNVKA 396
+D++ +A +AI+LN N T + R L T I KN +
Sbjct: 55 RDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQV 114
Query: 397 YLRRGTAREMLGYYKEAIEDFSYALVLEPTN 427
+ R E L + +E + L + N
Sbjct: 115 WHHRRVLVEWLRDPSQELEFIADILNQDAKN 145
Score = 44.2 bits (103), Expect = 2e-05
Identities = 11/73 (15%), Positives = 19/73 (26%), Gaps = 1/73 (1%)
Query: 352 AIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKKNVKAYLRRGTAREMLG-YY 410
I + Y A +A AI L+ N + R + L
Sbjct: 35 QIIYSDKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDL 94
Query: 411 KEAIEDFSYALVL 423
E + + +
Sbjct: 95 HEEMNYITAIIEE 107
Score = 34.9 bits (79), Expect = 0.016
Identities = 11/78 (14%), Positives = 20/78 (25%)
Query: 353 IKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKKNVKAYLRRGTAREMLGYYKE 412
+ L+ + Y +RA + I K Y + +
Sbjct: 2 VSLDSPSYVLYRDRAEWADIDPVPQNDGPNPVVQIIYSDKFRDVYDYFRAVLQRDERSER 61
Query: 413 AIEDFSYALVLEPTNKRA 430
A + A+ L N
Sbjct: 62 AFKLTRDAIELNAANYTV 79
>d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId:
9606]}
Length = 497
Score = 48.6 bits (115), Expect = 9e-07
Identities = 11/117 (9%), Positives = 30/117 (25%), Gaps = 2/117 (1%)
Query: 314 KLSTNTFNQKQSAEIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLES 373
+ N N +S A + + + ++ S +
Sbjct: 74 GQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQ 133
Query: 374 GSFLQAEADCTKAINLDKKNVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKRA 430
+ + + ++ + G +A + +A L P+N +
Sbjct: 134 THTSAIVKPQSSSCSYICQH--CLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQP 188
Score = 44.8 bits (105), Expect = 2e-05
Identities = 9/79 (11%), Positives = 23/79 (29%), Gaps = 8/79 (10%)
Query: 343 LKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLD-----KKNVKAY 397
L++ + +A L + A + + K + D K V+
Sbjct: 3 LQSAQYLRQAEVLKADMTDSKLGPAEVWTSRQALQDL---YQKMLVTDLEYALDKKVEQD 59
Query: 398 LRRGTAREMLGYYKEAIED 416
L + + + ++
Sbjct: 60 LWNHAFKNQITTLQGQAKN 78
Score = 29.8 bits (66), Expect = 0.79
Identities = 10/76 (13%), Positives = 23/76 (30%), Gaps = 4/76 (5%)
Query: 324 QSAEIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADC 383
+ + + A L I +Y +I + +N A ++
Sbjct: 184 SNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDE---- 239
Query: 384 TKAINLDKKNVKAYLR 399
K +KA+++
Sbjct: 240 VKTKWGVSDFIKAFIK 255
>d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 122
Score = 43.6 bits (102), Expect = 4e-06
Identities = 13/102 (12%), Positives = 28/102 (27%), Gaps = 5/102 (4%)
Query: 334 NQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLES---GSFLQAEADCTKAINLD 390
N+ + LK + + + A + + + + +
Sbjct: 7 NELVSVEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKG 66
Query: 391 KKN--VKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKRA 430
K L Y++A++ L EP N +A
Sbjct: 67 SKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQA 108
Score = 29.3 bits (65), Expect = 0.35
Identities = 5/38 (13%), Positives = 12/38 (31%)
Query: 333 GNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAY 370
Y+ K++ KA+ + ++ N
Sbjct: 79 AVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLID 116
Score = 29.3 bits (65), Expect = 0.41
Identities = 4/69 (5%), Positives = 11/69 (15%), Gaps = 3/69 (4%)
Query: 365 NRAAAYLESGSFLQAEADCTKAINLDKKNVKAYLRRGTAREM---LGYYKEAIEDFSYAL 421
+ L+ E + ++ I L
Sbjct: 4 AVLNELVSVEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELL 63
Query: 422 VLEPTNKRA 430
++
Sbjct: 64 PKGSKEEQR 72
>d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId:
562]}
Length = 259
Score = 45.6 bits (106), Expect = 5e-06
Identities = 24/128 (18%), Positives = 52/128 (40%), Gaps = 1/128 (0%)
Query: 301 ASLQEQADIATKSK-LSTNTFNQKQSAEIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNN 359
+LQ++ +A + L++ + A++ E+G A + +++A+ + +
Sbjct: 11 PTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDM 70
Query: 360 ATYYSNRAAAYLESGSFLQAEADCTKAINLDKKNVKAYLRRGTAREMLGYYKEAIEDFSY 419
++ ++G+F A + LD A+L RG A G K A +D
Sbjct: 71 PEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLA 130
Query: 420 ALVLEPTN 427
+P +
Sbjct: 131 FYQDDPND 138
Score = 44.4 bits (103), Expect = 1e-05
Identities = 16/95 (16%), Positives = 26/95 (27%)
Query: 333 GNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKK 392
Q +KQ + + + E E + +AD T +L +
Sbjct: 148 AEQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDNTSLAEH 207
Query: 393 NVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTN 427
+ G LG A F A+ N
Sbjct: 208 LSETNFYLGKYYLSLGDLDSATALFKLAVANNVHN 242
Score = 36.3 bits (82), Expect = 0.004
Identities = 14/68 (20%), Positives = 21/68 (30%), Gaps = 4/68 (5%)
Query: 367 AAAYLESGSFLQAEADCTKAIN----LDKKNVKAYLRRGTAREMLGYYKEAIEDFSYALV 422
A + A + + D + + RG + LG A DFS AL
Sbjct: 6 AVPLQPTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALA 65
Query: 423 LEPTNKRA 430
+ P
Sbjct: 66 IRPDMPEV 73
Score = 29.4 bits (64), Expect = 0.75
Identities = 8/46 (17%), Positives = 15/46 (32%)
Query: 318 NTFNQKQSAEIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYY 363
NT + +E G A + + A+ N +N +
Sbjct: 201 NTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVANNVHNFVEH 246
>d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1
{Human (Homo sapiens) [TaxId: 9606]}
Length = 95
Score = 41.0 bits (95), Expect = 2e-05
Identities = 14/91 (15%), Positives = 33/91 (36%), Gaps = 7/91 (7%)
Query: 325 SAEIAKEKGNQAYKDKQWLKAISFYTEAIKLNG-------NNATYYSNRAAAYLESGSFL 377
+AE + E G AY + + + +A++ + + + A + G
Sbjct: 4 TAEDSFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLD 63
Query: 378 QAEADCTKAINLDKKNVKAYLRRGTAREMLG 408
+A K + LD ++ +A ++
Sbjct: 64 KALLLTKKLLELDPEHQRANGNLKYFEYIMA 94
>d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III
{Escherichia coli [TaxId: 562]}
Length = 366
Score = 38.4 bits (87), Expect = 0.001
Identities = 14/113 (12%), Positives = 32/113 (28%), Gaps = 11/113 (9%)
Query: 326 AEIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNN-----ATYYSNRAAAYLESGSFLQAE 380
AE + A D +A A++ S G ++
Sbjct: 12 AEFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSL 71
Query: 381 ADCTKAINLDKKN------VKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTN 427
A + + +++ + + +++ G+ + A E A L
Sbjct: 72 ALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQ 124
>d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 290
Score = 35.7 bits (81), Expect = 0.008
Identities = 14/122 (11%), Positives = 42/122 (34%), Gaps = 8/122 (6%)
Query: 303 LQEQADIATKSKL-------STNTFNQKQSAEIAKEKGNQAYKDKQWLKAISFYTEAIKL 355
L ++A+ ++++ +++A++ + K+ A + +A
Sbjct: 7 LLKRAEKKGVPSSGFMKLFSGSDSYKFEEAADLCVQAATIYRLRKELNLAGDSFLKAADY 66
Query: 356 NGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKKNVKAYLRRGTAREMLGYYKEAIE 415
Y+E+ ++ + A++ + ++ + RG R + E E
Sbjct: 67 QKKA-GNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGE 125
Query: 416 DF 417
Sbjct: 126 IL 127
>d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC)
{Helicobacter pylori [TaxId: 210]}
Length = 265
Score = 32.6 bits (72), Expect = 0.084
Identities = 10/47 (21%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 326 AEIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLE 372
+ G ++YK+K + +A ++ +A L N+ + N Y +
Sbjct: 2 PKELVGLGAKSYKEKDFTQAKKYFEKACDLKENSGCF--NLGVLYYQ 46
>d2pgga1 e.8.1.4 (A:31-804) Viral RNA polymerase {Avian infectious
bursal disease virus [TaxId: 10995]}
Length = 774
Score = 31.1 bits (70), Expect = 0.32
Identities = 17/80 (21%), Positives = 29/80 (36%), Gaps = 14/80 (17%)
Query: 165 YEFKNNH-------NEWIESVKPALDPDISAEIGEMLEIS---ETVIENCKSIRNE-MRS 213
F NNH ++W +P D + I + L I+ E I++ + + +
Sbjct: 458 ATFINNHLLSTLVLDQWNLMRQPRPDSEEFKSIEDKLGINFKIERSIDDIRGKLRQLVLL 517
Query: 214 AISSLLKDDGILVTPTTAYP 233
A L V P + P
Sbjct: 518 AQPGYLSGG---VEPEQSSP 534
>d2b5ea3 c.47.1.2 (A:240-364) Protein disulfide isomerase, PDI
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 125
Score = 28.0 bits (62), Expect = 1.1
Identities = 8/46 (17%), Positives = 16/46 (34%), Gaps = 2/46 (4%)
Query: 129 LKHENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQR--YEFKNNHN 172
+ +Y +S +P F+ EL+ L + + N
Sbjct: 5 IDGSVFAQYVESGLPLGYLFYNDEEELEEYKPLFTELAKKNRGLMN 50
>d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit
tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId:
3702]}
Length = 145
Score = 27.9 bits (60), Expect = 1.3
Identities = 3/33 (9%), Positives = 11/33 (33%)
Query: 398 LRRGTAREMLGYYKEAIEDFSYALVLEPTNKRA 430
+ T + + +++ +D P +
Sbjct: 1 MDTETEFDRILLFEQIRQDAENTYKSNPLDADN 33
>d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId:
1831]}
Length = 317
Score = 27.9 bits (60), Expect = 2.5
Identities = 11/59 (18%), Positives = 29/59 (49%)
Query: 177 SVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPP 235
+ P LDP+++A + + ++ + N ++ + + A+ + L DG+ + +A
Sbjct: 1 TTFPTLDPELAAALTMLPKVDFADLPNARATYDALIGAMLADLSFDGVSLRELSAPGLD 59
>d1ilea1 a.27.1.1 (A:642-821) Isoleucyl-tRNA synthetase (IleRS)
{Thermus thermophilus [TaxId: 274]}
Length = 180
Score = 27.3 bits (59), Expect = 2.7
Identities = 6/39 (15%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Query: 173 EWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEM 211
+W E+ D + A++ +L++ ++ ++ R +
Sbjct: 144 DWPEADPALADEALVAQMRAVLKV----VDLARAARAKS 178
>d2b7ma1 a.118.17.2 (A:73-623) Exocyst complex component EXO70
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 551
Score = 27.2 bits (60), Expect = 4.7
Identities = 12/81 (14%), Positives = 27/81 (33%), Gaps = 2/81 (2%)
Query: 136 EYFDSKVPSLKGFHKTNGELKNVMRLIQRYEFK--NNHNEWIESVKPALDPDISAEIGEM 193
E S + + + +G L ++ +LI+R E + + S+KP +
Sbjct: 40 EDIQSGQANREENSEFHGILTHLEQLIKRSEAQLRVYFISILNSIKPFDPQINITKKMPF 99
Query: 194 LEISETVIENCKSIRNEMRSA 214
+ + I +
Sbjct: 100 PYYEDQQLGALSWILDYFHGN 120
>d2djka1 c.47.1.2 (A:1-133) Protein disulfide isomerase, PDI {Fungi
(Humicola insolens) [TaxId: 34413]}
Length = 133
Score = 25.7 bits (56), Expect = 7.0
Identities = 7/34 (20%), Positives = 14/34 (41%)
Query: 131 HENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQR 164
E +Y + +P F +T E K + ++
Sbjct: 13 PETYSDYMSAGIPLAYIFAETAEERKELSDKLKP 46
>d2p0va1 a.102.1.8 (A:39-481) Hypothetical protein BT3781
{Bacteroides thetaiotaomicron [TaxId: 818]}
Length = 443
Score = 26.3 bits (58), Expect = 9.0
Identities = 18/87 (20%), Positives = 36/87 (41%), Gaps = 12/87 (13%)
Query: 188 AEIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPT----TAYPPPKLGGKEML 243
AEI + + + C ++ +E+ A+ K + P A+ G + ++
Sbjct: 251 AEILNTVNRKPALAKECTALADEVEKAL----KKYAVCNHPKYGKIYAFEVDGFGNQLLM 306
Query: 244 SEDYQNRAFSLLSIASVSGCCQVTVPL 270
D N SL+++ G +VT P+
Sbjct: 307 --DDAN-VPSLIALP-YLGDVKVTDPI 329
>d1wfda_ a.7.14.1 (A:) Hypothetical protein 1500032H18Rik {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 93
Score = 24.8 bits (54), Expect = 9.6
Identities = 10/52 (19%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 379 AEADCTKAINLDKKNVKAYLRRGTAREMLGYYKEAIEDFSYALVLEPTNKRA 430
++D T A+ + K+ V+ ++ L Y+E I+ L + +
Sbjct: 8 QDSDSTAAVAVLKRAVELD-AESRYQQALVCYQEGIDMLLQVLKGTKESSKR 58
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.133 0.383
Gapped
Lambda K H
0.267 0.0557 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,607,003
Number of extensions: 74353
Number of successful extensions: 300
Number of sequences better than 10.0: 1
Number of HSP's gapped: 261
Number of HSP's successfully gapped: 74
Length of query: 442
Length of database: 2,407,596
Length adjustment: 88
Effective length of query: 354
Effective length of database: 1,199,356
Effective search space: 424572024
Effective search space used: 424572024
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.0 bits)